CXD79_RS00015    3394 ..    3417 +  -6.8  -2.96979   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCTGTTCC  51 16
CXD79_RS00020 NONE
CXD79_RS00025    5210 ..    5241 +  -3.6  -3.14344   ACGCGGCCAGCGGCG      CTTACCG-CGCCG GCTCGTA CGGCGTCGGGCAG      TTGCTGGCGGCCGTG  45 103
CXD79_RS00035    6413 ..    6434 +  -7.3  -4.09685   CTCAGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  67 116
CXD79_RS00040 NONE
CXD79_RS00045    6668 ..    6680 +  -2.7  -3.65046   GTCATGGGCACCATC                GAATT CTA AGTTC                TTCTTCAAGTCAGAA  53 28
         tuf    7926 ..    7960 + -18.1  -3.72893   AAGGCGCGGTTTTCC    CATGGATAGAGGGGCC GGAT GGCC-CTCTATCCATG     TTTGCTGGAAAAGTA  93 39
CXD79_RS00055 NONE
        secE NONE
        nusG    9056 ..    9074 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CXD79_RS00075   10300 ..   10321 + -14.5  -2.62184   ATAGAACTTTGGGCC           GCATCCGGA CTTG TCCGGATGC            TGCTGTCAAAGACCG  71 55
CXD79_RS00080   11043 ..   11056 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG CGTC CGGAA                TTCGCTGAACGACAA  41 31
CXD79_RS00085   11517 ..   11549 + -17.7  -4.35524   AGACCTCGCGTCGAC      GCCCGGGGACAGC GCTCTTA GCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 40
        rpoB NONE
        rpoC   20076 ..   20099 + -16.8   -4.4078   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 83
CXD79_RS00105   22150 ..   22174 +  -3.4  -3.02144   AGCCCCAGGCCAGCG          CCGCCTACTT CGTTC GAGCCGGCGG          TGTTGACGCGCGTAA  42 228
CXD79_RS00125   27452 ..   27486 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS00160 NONE
CXD79_RS00165   34454 ..   34511 + -16.7  -3.53224   ACCTGATGGCGCTGT GCGAACCCGCGCCATGACGCCGGGCCGG CGC CCGGCACGGCCCCGCGGCCCGGGC-CGC TTTGCGGGCCGACTA  86 9
CXD79_RS00170 NONE
        glyQ NONE
CXD79_RS00185 NONE
CXD79_RS00190   40595 ..   40613 +  -2.2  -2.53015   CAACTGCTGCAGGAG             GCCTGATC CAT GGCCTGGC             TGCGTTCGGCGCTGT  37 20
CXD79_RS00195 NONE
CXD79_RS00200   42211 ..   42236 +  -5.9  -3.74693   CCCTGCCGCAGTTCT         GAGCCCGCGCC GGCT GGCGCGGCCGA          TTTGCTACGATGACG  59 24
        gloA NONE
CXD79_RS00210   43600 ..   43610 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  57 407
CXD79_RS00220   45098 ..   45110 +  -6.2  -2.71144   GGCCACGCCCGGGGC                CGCC GGCCA GGCG                TAATTGGCCAGGCTG  47 509
CXD79_RS00230   46039 ..   46051 +  -6.2  -3.96531   AGTCTCGATTCGTGG                CGGC ATCAA GCCG                TTTATCCATATCTGA  64 315
CXD79_RS00240   47473 ..   47511 + -10.9  -3.14132   GGGCCAGGTTGATCT  CCAGCGGCGCGGCGGC GCGGGAAG GCCGCCGCGAC-CGGG   TTGGTGCCCAGCAGC  64 520
CXD79_RS00250 NONE
        metW   50078 ..   50088 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 97
CXD79_RS00265   51098 ..   51113 +  -3.2  -2.70932   TCACAGCTAGCAGGA              CCGG CGCGCCTA CCGG               TCGTTCCACGGGAGA  40 31
CXD79_RS00270   52437 ..   52452 +  -7.5  -3.14527   CGCTACCCGCGCAAG              CCGCC CGCAGT GGCGG               TATTGATAACAATTC  54 71
CXD79_RS00375   70070 ..   70080 +  -4.6  -3.07013   CAAGCATGGACGCAT                 GTCG CAA CGGC                 TGTATTGACCCAGTG  45 59
CXD79_RS00380   70668 ..   70678 +  -4.6  -3.10464   ATTCAACAAGAACAC                 CGTG CAG CGCG                 TGTTCCAGTTGATGG  47 249
        htpG   73562 ..   73594 +  -6.8  -4.08767   ATGCGCTCGATCAAG      GGGTGGCTGTCCCC GCGCG GGGGGCTGACACCG      TTTTGGCAGGCTGGC  67 43
CXD79_RS00420   77804 ..   77838 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS00430   79792 ..   79808 +  -2.1  -4.07568   AGTCTTCCCCGATCA              GCAGTTC TTC GTACAGC              TTTTCCCCGGGCCGC  58 213
        waaC   92972 ..   92998 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ACA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CXD79_RS00495   94274 ..   94284 +  -8.2  -3.14132   ATTGGCTGGGATAGC                 CCGC CGT GCGG                 TTCGTCAGGGCCGCA  56 27
CXD79_RS00515 NONE
CXD79_RS00520   98558 ..   98572 +  -4.2  -5.01732   CATGCCGGCCACCAT               CCCG CTGCGGC CGGG               TTTTTTCCAGCGCTT  81 404
CXD79_RS00530 NONE
CXD79_RS00535  100410 ..  100423 +  -2.4  -3.51934   TGACCCGGCCCGCGT               TGCA TCACGT TGCA                TGTTTGTAAGCGCAA  48 38
CXD79_RS00540 NONE
CXD79_RS00545  102743 ..  102768 + -13.2  -3.61178   CTGTAGCGGCCGGCA         GGCGGGCGGC CCTGGC GCCGCCCGCG          TTTCGCGTCCCTCGC  77 35
CXD79_RS00550 NONE
        lipB  103778 ..  103800 + -12.7  -3.31792   CTTTTTTGTCTCGAA           CCGGAGCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  71 49
        lipA  104853 ..  104873 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
        metC  110499 ..  110518 + -10.7  -3.89346   CCCATCAACGACAAA            GCCTCCG CATGGA CGGAGGC             TTTGTGGCGTCGGGG  77 53
CXD79_RS00610 NONE
CXD79_RS00615  114737 ..  114765 +    -6  -3.78419   GTCCGCAGGGGGACT        GGCACCGG CCAAATCCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 100
CXD79_RS00620  116017 ..  116032 +  -5.4  -2.72991   CCATGCTCCATCCGG              GGACAGG CAC CC-GTCC              TCCTTCAGCGTATCC  45 81
CXD79_RS00685  128728 ..  128770 +  -5.5   -3.1247   ACGGATCGCCGTCGA TACGGTGGCGGACCAGCTGC CAGG GCTGCTGCTGCGCCAG-GTA TTCGCTGTCGAAGAT  47 466
        rpoN  132587 ..  132602 +  -6.2  -4.30833   CCACGCCGCGGGTCG              TTAGGA CGCC TCCTAA               TTTGTTCCTGATTTC  73 22
CXD79_RS00705  132999 ..  133030 + -16.6  -3.96148   GAGCGACGCGGCGCC      TTGCGCCAGCCGGC TCAT GCTGCCTGGCGCAA       TTTATCGTCCCCACA  93 39
CXD79_RS00740  142789 ..  142802 +  -5.2  -3.77188   CGGGACGGATCCAGG               GCGC CGCATT GCGC                TATTTATGTTTCAAT  60 70
CXD79_RS00745  143562 ..  143582 +  -8.9  -3.96148   GAGCCGGGCGACGAC            CGCCTGCGC GTC GCGTAGGCC            TTTCTCCTCACGACA  70 8
CXD79_RS00775  150294 ..  150327 +  -7.4   -3.1505   CGGCCACGCCGGCCA     GCGCGCCGACCTGGT AGACC ACCAGGTCGTAG-GC     TTCCTGCGGGGTGAT  54 510
CXD79_RS00800  154063 ..  154084 +  -6.5  -4.28361   GAAGCGCACCAGTTT           C-TCGGCCAC TTC GCGGCCGATG           TTTTCCTGGGATTCC  72 374
        ubiE  160820 ..  160835 + -11.8  -3.53811   AAGGTTTGCCGCGCA              GGCCCC AACC GGGGCC               TTTCCAGCCGCTCCC  72 121
CXD79_RS00840  161990 ..  162017 + -19.2  -3.30007   CGGCCGGGCTGCACC        GTGAACCGGCCC GCCA GGGCCGGTTCGC         TTATGGGCCGGTCTT 100 103
CXD79_RS00845 NONE
        ubiB  164640 ..  164672 +  -4.8  -3.13403   TCAAGATGAACGCGA     TCACCGAGTGGGCGGC CTT GCCGGCCAC-CGA-GA     TGTTCCTGCGCGACA  47 330
CXD79_RS00880 NONE
CXD79_RS00885 NONE
CXD79_RS00890 NONE
CXD79_RS00895  173560 ..  173581 + -17.3   -4.7373   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG 100 48
CXD79_RS00905 NONE
CXD79_RS00910  175446 ..  175463 +  -6.3  -3.05844   ACAGGTCGTCGGCGA             TCAG-CGC CTC GCGGCTGA             TCTTGCGCTCGGGCG  49 219
CXD79_RS00920  176974 ..  176984 +  -6.8  -2.62735   TGGGCCGCCGGTTCC                 CAGG AGT CCTG                 TCATGTCCGCAATCT  47 104
CXD79_RS00925  177786 ..  177818 +  -2.6  -3.92324   TGGCGGCGCCGCGTC     CAGCCCC-C-GCGCCG TAG CGCCTTGGCGGGGCTG     TTTACTATTACGCCC  56 9
CXD79_RS00930  178707 ..  178751 +  -8.3  -3.92324   GGGTTCGGCCTTCTC GTCGGCGTGGCTGGCGGCCAG CAC CATGCCCTCGGACACGCCGAA TTTCATCTTGCGCGG  70 135
        apbC  182418 ..  182435 +  -3.3  -3.14125   TGGTGGTCCGGCCCG             CCTGACG CATG CGTCGGA              TATTGCGTGTCTGCC  44 21
CXD79_RS00950 NONE
CXD79_RS00955  188025 ..  188037 +  -7.7  -3.37344   GCGGCGGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  59 49
CXD79_RS00960  188816 ..  188837 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC CTC GTCGGGCTGC           TTCATGTAGCGGGAA  52 216
CXD79_RS00980  190652 ..  190680 +    -8  -5.24129   GTCCTACAATTCCCC        GAGGTCGGCCCG CTCGT CGGGCCGGTTGC        TTTTTTGTCACCAGC  95 76
CXD79_RS00985  193035 ..  193074 + -33.6  -3.65812   GCAGTAAATCCGACG  CGCCGCGCCGCGCCGCCC GAGG GGGCGGCCCGGCGCGGCG   TTGTCTTCGAGGGAG 100 34
CXD79_RS00990  194342 ..  194352 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS00995  195369 ..  195394 +  -4.7  -3.72481   TAGCCTGGCGGGCAC        GGCGCATGCGG GCAGGG CCGC--GCGCC         TATTGTTTTGGTAAA  55 38
CXD79_RS01000 NONE
CXD79_RS01005  197008 ..  197023 +    -6  -3.55444   AACAGGGGCGGATCG              GCGCCC ATCC GGACGC               TTTGCGGCATGGCGC  56 49
        gcvT  198501 ..  198524 +  -7.4  -3.97368   GGCTTCCGCGCGGCC          GTTGGC-CGCC GGA GGCGCGCAAAC          TTTCTCCATTCCCAC  68 47
        gcvH  198958 ..  198978 +  -8.1  -3.90744   CAACGGGCCGGCCCG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAAAAC  68 48
        gcvP  201878 ..  201923 +    -9  -3.75665   GTGCGCGCTCATGGC GCATGACGAGGTGCCTGTCCCC CCAT GGGGACTGGCACCT-G-CAAGA TTTCATGGCGTCTGC  68 44
CXD79_RS01030 NONE
CXD79_RS01035  205408 ..  205444 +  -6.6  -4.26019   CTTCGGCCTGTGCCT   GTGCGCCGACCTGGTG CTGGCCA CGCCAG--CGGCGCGC   TTTTGCCTGTCGTTC  70 411
CXD79_RS01045  206615 ..  206650 +  -3.2  -3.56568   GTGGCCACTTGTGCC    GCAATGCGC-CAGCAGG GAA CTTGCTACGCGCATCGG    TTTGGCAGATCATTG  49 54
CXD79_RS01050  207522 ..  207533 +  -7.2  -3.60098   GGGCTTGCCGTTCAT                GCCG ACCA CGGC                 TTTGGCGTAGCCGGT  60 481
CXD79_RS01085  212334 ..  212348 +  -4.2  -3.72893   CAGGGTGCGCGTCAG               GCCG ATCAGCC CGGC               TTTGGTCGCCGAATA  55 352
        queC  222889 ..  222902 +  -4.5  -2.82623   GCATCAGGACGGTGT               CGCGCC ATT GGC-CG               TGCTTGTAGCCCACC  44 126
CXD79_RS01125  224420 ..  224454 +  -8.4  -2.84298   CCTCCAGGCATCGCC     GCGCGACTGAGCCTGG CGC CCGGCCTGCGTTGCGC     TAGTTGTGAACTGTC  54 16
CXD79_RS01140 NONE
CXD79_RS01145  227802 ..  227823 + -18.7  -3.41051   ACGACTTTGCTGTGC           CGGGCGCCC CTTG GGGCGCCCG            TTGTCCTACCCGTAG  93 80
CXD79_RS01150  229388 ..  229410 +    -4  -4.18018   CCACCGCCTTTTCCT           GCATGCCCTG CTG CAGCGCGTCC           TTTTCGCTGACGCCC  63 123
CXD79_RS01160  232169 ..  232188 +  -5.6   -4.7497   GGCCGGCGCAACCGG            GACAGCCT TGCG GGGCTGCC             TTTTTCATGGATGGG  81 64
CXD79_RS01165  233273 ..  233283 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 76
CXD79_RS01170  234263 ..  234308 + -13.5  -3.14132   CAACCTGGACGAATA CAACCTATTGACAGTTCACAG CTAG CTGTGATGTCTCAATAGGTTG TTCATCCAGGCCGGA  72 1
CXD79_RS01175  235490 ..  235524 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS01195  238817 ..  238855 +  -7.3  -3.14229   AGGCGGCGCTCGAAG  GCGCCGACGGCGCCC-TGC AGG GCATGGGCCCGGGCG-CGC  TGTTCATCAACATGT  52 315
CXD79_RS01215  243994 ..  244012 + -11.6  -3.04144   ATCATCCATCCCACG             GCGCCGGC GGC GCCGGCCC             TGTTCGCGCTGGCCG  65 367
CXD79_RS01225  246015 ..  246062 + -10.4  -3.01712   AAGGCAATCTGCAGC CCTGACCAGGGGAGCCGCTGCCC TCA GCGCAGCGGCTCGA-TGGCCTGG TCTTCCAGCGCGGCC  60 21
CXD79_RS01250  250652 ..  250681 + -23.7  -3.18264   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 97
CXD79_RS01265  254285 ..  254314 + -23.7  -2.62616   CGACACCCGCGGCAA       GGGTGCCTGTCCC AGCC GGGACAGGCACCC        TGCTGTACGCCATCG 100 72
        fumC  257780 ..  257792 +  -4.7  -2.52464   GCGCGCCGCTAGAGC                GGCGC CGG GCGCG                TCAGTTGGGCGCGCC  42 29
CXD79_RS01290  259921 ..  259936 + -11.8   -5.4505   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC 100 54
         ggt  263106 ..  263125 +  -5.6  -4.36914   CGCCAGGAAGATCGG            CCCGGCGCC GGT GG-GCAGGG            TTTTATACGGCGCGA  69 414
CXD79_RS01320  266940 ..  266957 + -14.1  -3.84451   GTCGAACCAGGAAAA             CGCCGCC GTCA GGCGGCG              TTTGCGTTTGCGCAA  83 441
CXD79_RS01330 NONE
CXD79_RS01335 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC  274050 ..  274087 +  -2.7  -2.71041   AGGCCGGCTGCACCG   CGCCGCGCCCATGT GACTGGCCTAA GCATCGGCGC-GCG   GTTATAGTTCGCCTT  40 10
CXD79_RS01360  274808 ..  274834 +  -8.7  -2.84812   CCCAATCGGGCAGCA        CGCG-CACCAGG CCTG CCTGATGGCGCG         TGTCATGCTGTCGCT  54 157
CXD79_RS01370  276239 ..  276280 +  -7.9  -4.18488   CGGCCGGACACTGTG GGCAGTGCTTCGCGCGCAGC ATG GCTGCGCCAGGCGCA-TGTC TTTCTTGCCATCCGT  74 167
CXD79_RS01390 NONE
CXD79_RS01395  279171 ..  279183 +  -3.3  -3.34517   TGCATTGTAGTGAAA                CTTCG CGC CGCAG                TCTTTCGGACAGGCT  46 518
        mscL  284440 ..  284452 +  -6.2  -3.63569   CAGGCCCAGCACGCG                CGCC AGCTG GGCG                TTGTTGCCCCATTGC  57 479
CXD79_RS01440  286143 ..  286177 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS01470  292514 ..  292540 + -12.3  -2.58544   CAGCACCGCCAGCTC        GGCCGCGGCCAC GGCG GTG-CCGCGGTC         ATTGTGCGGGTGCAC  62 285
CXD79_RS01480  294157 ..  294200 +  -8.1  -3.33814   CGGCGCGGCGCGAGC CGCCGG-CCTGAGGCGCCGGCG GGG CGTCG-TGCC-CGGATCCGGCG TATTATCTAGCGTTT  56 15
CXD79_RS01485  296255 ..  296281 + -11.5  -2.74488   TGTCCTGATTCACAG        GCCCGCG-CGGC CAGC GCCGGCGCGCGC         TGATTCGCGTCGTTG  62 176
CXD79_RS01495  298796 ..  298815 +  -7.8  -3.35679   TGATGCCCAGCTCCA            GCCCGATC AGGT GATAGGGC             TTGTACATGGCCGAA  59 391
CXD79_RS01520  303340 ..  303371 + -10.1  -3.05384   TCCACCTTGAGCAGC      GGCAGCCGGCCCAC GTCCA GCGGGTC-GCTGCC      TTCGGTGCGCAGCAG  59 344
CXD79_RS01540 NONE
CXD79_RS01545 NONE
CXD79_RS01550 NONE
CXD79_RS01555 NONE
CXD79_RS01560  310348 ..  310375 +  -9.1  -4.07568   TCCCGAAGTCTTCCT        TC-CTGCGCCGG CCTGT CCGGCGCAGCGC        TTTTGGGGACGGCAC  75 56
CXD79_RS01575 NONE
CXD79_RS01580 NONE
CXD79_RS01585 NONE
CXD79_RS01590 NONE
CXD79_RS01595  318579 ..  318597 +  -3.1   -3.4247   ATCTTGGCGTGCGTC            TG-GCGGG CGCG CTCGCTCA             TGTTGTTGACGTTCT  47 336
CXD79_RS01620 NONE
CXD79_RS01625 NONE
        ruvX NONE
CXD79_RS01635 NONE
CXD79_RS01640  326571 ..  326585 +  -2.7  -2.82516   CAGCCGCAGCGTGCA               CACGC CGTTC GCGGG               TATGATGCTGCCCGG  41 64
CXD79_RS01645  327391 ..  327427 + -16.4  -3.06831   TCGCCGGCGAGCTGT    AGCCGGCCCGGGCGGC GCGTG GCCGCCCGCGGCGGCG    TTCAGTCGCCGTTGG  79 24
CXD79_RS01665  331718 ..  331742 +   -15  -3.16492   TCATCCTCCGGTTGC         CGCCGCGCGGG CCGT CCCGC-CGGCG          TGTTGCTGGCTATCC  76 408
CXD79_RS01710 NONE
CXD79_RS01715 NONE
CXD79_RS01720  340860 ..  340882 +    -9  -2.71681   CGCGCAGCAGCCGGT           CGCCGGCGGC ATG GCCGTGGGTG           TCATTGACCGACTTG  52 361
CXD79_RS01745  344573 ..  344583 +  -2.4  -2.82519   CCAGCGTGTCGCACC                 AGCG CGC CGCC                 TGATTGATGTCATGC  39 190
CXD79_RS01790 NONE
CXD79_RS01795 NONE
CXD79_RS01800 NONE
CXD79_RS01805  355088 ..  355122 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS01825  359296 ..  359320 +  -7.8  -4.96388   CTGAAGCGGCGTCGC          GCCCGGGG TGCGGGTTT TCCCGGGC          TTTTATTTAGTGCTT  86 37
CXD79_RS01830 NONE
CXD79_RS01835 NONE
CXD79_RS01840  362150 ..  362166 +  -3.6  -2.62157   CAAGAAGTAGACGCA              CCCTGG AACGG CCATGG              CTTATCGCATTCATC  40 31
CXD79_RS01845  363217 ..  363244 + -15.6  -2.56596   TGCCCGGGGTGCCGG        GGTGCCTGTCCC AGCG GGGACAGGCACA         TGGATTCCTGCGGGG  74 69
CXD79_RS01850  364197 ..  364225 + -10.1  -4.11216   GCAACAAGCGGCGGG        GTTTGCCGGCGCG GCT CGCGGCGGCGCGC        TTTTCGGCATGCCGC  78 94
CXD79_RS01855  365814 ..  365830 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD79_RS01870  368061 ..  368090 +  -4.1  -4.29738   ACATAGTTGACGTAG       TTGCCGGCGCCGT GGCC GTGGCGCACGCAG        TTTTCGTGGATATCG  67 144
CXD79_RS01885  371438 ..  371467 +  -2.7   -4.8622   AGGAGCTCGTCCCCA       CGGGGACTGGCTCC CGA GGGATCAG-CCCAG       TTTTTCCTTCAGCAG  77 118
CXD79_RS01905  376093 ..  376121 +  -4.5  -3.35679   GGCGCGGCCCGCGAA       GCAGCTGCGGGC AGGCAG GCCCG-GGCTGA        TTATCCATGCAACGA  51 79
        mreC NONE
        mreD  377551 ..  377576 +  -3.9  -3.09492   GACGACGTCGAATCT         TCCG-CCGTCTG ATC CGGGCGGGCGCA         TGTTCGAATTCAAGA  45 14
        mrdA NONE
        rodA  381132 ..  381179 +  -4.6  -3.61715   CCCTGCGCATCGATC AGCGCGC-CGTCGGGGGCCGG CTCGCCC CTGGCCGCCAGCACGCGCGCC TTGTTGACCGCGATC  54 496
CXD79_RS01955  387255 ..  387293 + -11.9  -4.42788   TGGTGGCCCAGAACT  TCACCA-GCACGACCTTGC CGC GCA-GGTCCTGCATGGTGA  TTTTCTGGCCTTCGA  88 498
        rsmI NONE
CXD79_RS01985  391027 ..  391061 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS01995 NONE
CXD79_RS02000 NONE
CXD79_RS02005  394319 ..  394350 + -15.9  -4.25104   GGCTGAGCGCCGGCC      CGGGTGCCTGTCC CCGCGC GGACAGGCACCGG       TTTTCCTGCGGGGAC  95 35
        trxB  401094 ..  401104 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS02040  402385 ..  402406 +  -8.7  -3.18582   GCGCCACCAGGCCCA           CCGCCTGCGT ATC GCGCAG-CGG           TTGGTAGCTGAGCTG  56 269
CXD79_RS02100 NONE
CXD79_RS02105  415009 ..  415023 +  -2.7  -2.62184   TGACGCCAGGGAACT               GGCGG GCACG CCGCA               TGGTCTGAGCAGAAG  39 38
CXD79_RS02110  416422 ..  416432 +  -5.4  -3.37533   AGAAGAACGCGTGCA                 GGAA GCG TTCC                 TTGATGGTTTTGGGG  49 438
CXD79_RS02125  417826 ..  417881 +  -9.8  -3.13403   CCAGCACCAGCCAGA GGC-T--GCGCCGC-GCGTCGGCAAAGCG CGC CGCCTGGCCG-CGCAGCGGCGCGTACGCC TCTTCGTCGGCCGCC  60 53
CXD79_RS02140  421085 ..  421095 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 54
CXD79_RS02145  422224 ..  422261 + -10.6  -3.53224   GCCGGTCATGGAGCA  GCC--GGCCAGGCGC-ACG CGC CGTTGCGCCCGGCCACGGC  TTTCGCGCAGCGCTA  70 123
        gltS  423521 ..  423532 +  -4.4  -3.16881   GCCGTTCGTGGGAGG                CATG TGAC CATG                 TTCATCCGCTGGCTC  47 19
CXD79_RS02155  425465 ..  425479 +  -2.1  -3.14931   GATCACGATGCCCGC              GCC-TC CCTT GATGGC               TTCGTCCAGGCTGGC  43 455
CXD79_RS02185  431313 ..  431341 + -10.3  -2.57026   TCTGGATGGGGGAAA       GCGGCCGGC-CGG GCTTG CCGTGCCGGC-GC       ATTGGTGTCACTCTA  57 65
CXD79_RS02220  437777 ..  437821 +    -4  -2.87132   GGCGTGGCGCGGGGG CCGCCGGCGGATGACGCCGCG GCCG CGCGGCGGCAA-TACCTGCGA TGTATCGGCCGACCC  43 12
CXD79_RS02225 NONE
CXD79_RS02230 NONE
CXD79_RS02235  441114 ..  441159 +  -8.9  -3.32769   GACGAAGTTGGCGGT GGTCGGCGTGGCGTT-GTCGGG ATG CACGGCCAGGGCGATGCCGACC TTGATGGTTTCGGCC  59 105
CXD79_RS02245 NONE
CXD79_RS02250  444386 ..  444408 + -10.4  -4.69622   CCTAGCGTCGTCCGC           ACGCCGCGCC GCC GGCGCAGCGA           TTTTTCCCCTTGTCT  93 36
CXD79_RS02255  445842 ..  445857 +  -2.6  -4.08216   CAGGAAGCGCGACAC              CATGTAG TAG CT-CATG              TTTTCCACGCAATAC  58 233
CXD79_RS02285  451787 ..  451802 +    -6   -3.5774   TTACCGCTCAAAGCG              CCGCGG CGAA CAGCGG               TTTCCACGATTCGAT  56 63
CXD79_RS02315  461101 ..  461122 +  -5.7  -3.30771   CCCGCTCAGGACATC           GGTAAGCGC CGCG GCGCTGCCC            TTGTACGGAATGTGC  51 409
CXD79_RS02340  464559 ..  464588 +  -7.7  -3.14132   CTGCCTGAGCGCCGC       GAGCCGCTCGCCG CACA CGCCCAGCAGCTC        TTCGTACACCCCGGC  54 33
CXD79_RS02350 NONE
CXD79_RS02355  466926 ..  466946 +  -3.1  -2.77192   CAGCACCGAGCCATA            GAGCAGCGG CTG CTGCAGATC            GTTCTTGCCGGCCTT  39 97
CXD79_RS02380  473921 ..  473947 + -23.8  -4.79223   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 34
CXD79_RS02425 NONE
CXD79_RS02430  485481 ..  485518 +  -8.3  -3.28924   CCATGTCCAGCGAGG   CGTCGTCGGGTACCTGG CCGG CCAGGTAGGCCACGCCG    TTGTAGACAGCCATG  59 441
CXD79_RS02445 NONE
CXD79_RS02450  488131 ..  488174 +  -3.1  -4.58685   GGTCGAAAACTACTG GTAATCCCCCCTATGGCAGGG GGAA TCC-GCCATGAGGGGG-TCGC TTTTTCACAACATTT  71 22
        phaZ  489529 ..  489544 + -11.8   -4.2687   GCGCGCTCCCTGCAA              CGGGCC GCCT GGCCCG               TTTCTGCTTTTTACG  91 48
        rsxB NONE
         nth  490918 ..  490932 +  -3.4  -3.88985   ACATCGTGGGAAACA               CCGTGG AAA CCCTGG               TTTCTGAAGCGTTTT  56 108
CXD79_RS02470 NONE
CXD79_RS02475 NONE
CXD79_RS02480  493861 ..  493871 +  -8.2  -2.52516   AACCTCCTGAAGGAA                 GCCG ACA CGGC                 CTTGCTCATCCGGCA  51 39
CXD79_RS02485 NONE
CXD79_RS02490 NONE
CXD79_RS02495 NONE
CXD79_RS02500  497776 ..  497810 + -30.1  -3.09516   GCTGACCCGCGCGCA     CGCTGGCGGCGCGGC GCCAG GCCGCGCCGCCAGCG     TTCAGTCCTGGGCGC 100 36
        msrB NONE
CXD79_RS02540 NONE
CXD79_RS02545 NONE
CXD79_RS02550  506220 ..  506249 + -19.5  -4.13767   AGCCATCGCCATCAA       CAAAATTGCCCGC TTTC GCGGGCAATTTTG        TTTTCGGCTGCCGGG 100 47
        lplT  514829 ..  514857 +  -6.5  -3.74747   CAGCAGGGCAATCTG        GCGCCGCAGGTAG GGA CTGCAGGCGGCGA        TTTCCTCGGGCTTGG  61 278
        ompR NONE
CXD79_RS02590 NONE
CXD79_RS02595  519032 ..  519042 +  -4.6  -3.10677   TAGCGTAGAATTTAG                 GGCT TGA GGCC                 TTGCCTGCCTTAATT  47 38
CXD79_RS02600  519639 ..  519655 + -10.8  -3.95584   GCTGTAATTTCCCCG              GCCCGG CTCGT CCGGGC              TTTCATTGCTCCAGA  79 34
CXD79_RS02605  520219 ..  520271 + -15.5  -2.79188   AGCGCCCCCCGCGGT GCGCCGGCCTCCCCCGCCGGCGGCCG CAGC CGGCC-CCTGCGCGGG-G-CCGGCAC TCATTCCCTTCCCTC  75 40
CXD79_RS02615  522915 ..  522931 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD79_RS02635 NONE
CXD79_RS02640  526657 ..  526683 +  -8.7  -3.53012   ATCCAGCTCGAATAG        GCGCGCCCGC CCCGGCCT GCG-GCGCGC         TTTGGCGCACCGCAG  62 26
CXD79_RS02645  527728 ..  527764 +   -16   -4.2558   GGCGCCTGCCCATTG   CGCGCCAA-TCCCGC CCAATCAA GCGGGAATTGGCGCG    TTTTCCTGGACAATC  95 41
CXD79_RS02650  528643 ..  528653 +  -2.4  -3.01497   AGTAAGGCGGCCGGA                 GCGG GAA CGGC                 TATGCTTTCGGCTGC  41 84
CXD79_RS02655  530055 ..  530087 +  -3.2  -4.72272   CGGCCGGCGCACGCC     GCCGGCGCGCGCCGG CCCT CCGGTTC-CGCCCCC      TTTTTCGTGGAGAAC  75 476
CXD79_RS02665 NONE
        argF  532370 ..  532392 +  -6.3  -2.58714   AAGCGCTAAAATGCC           CCGTTAGAC TTCTT GTTTGACGG           TCCGTTGCTGTCAAA  46 112
        argG  533787 ..  533816 + -23.7  -4.08394   GCGGCAACCGCGCGA       GGGTGCCTGTCCC TGCC GGGACAGGCACCC        TTTTGCCGCAGGTGT 100 41
CXD79_RS02740  546840 ..  546876 + -20.4  -3.34398   ATGGCCTGCCTTCAT   GAAAGCCCCGGTCAATC GCAT GATTG-CCGGGGCTTTC    TCTTTGCCGCGCCGC 100 60
CXD79_RS02750  547790 ..  547812 + -12.7  -5.63517   TGATGTGCCCAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGCC 100 65
CXD79_RS02760 NONE
CXD79_RS02765  550755 ..  550765 +  -4.6  -2.92371   CCAGCCAGCCGTAAA                 CCGG CAT CTGG                 TATGGTTGCCTCCAT  44 53
CXD79_RS02770  552499 ..  552509 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS02775  553732 ..  553764 +  -3.2  -3.05844   CCATGTTGCTCGACC      CGACCGTGGACCAC ACGCC GTCGACCACCGCCG      TCTTGGCGTGCAACA  43 244
        egtD  557187 ..  557201 +    -7  -2.71011   GCGCCCGCCACCCAC               GTCCGC AGC GCGGCC               TGCTTACCCGCCCGT  48 366
CXD79_RS02800  558368 ..  558399 + -20.4  -4.37886   CCAGAGAATTCAAAA      CAAAATGCCCGCAA TCGC TTGCGGGCATTTTG       TTTTGTGCGCGATGA 100 38
CXD79_RS02815  559850 ..  559890 +  -5.8  -3.58536   AGGCTGCGCCAGTCT  ACCGCCGCGGCCGGCGCG CCATT CGCGGGGACTGAGGCGGC  TTTGGCCGTCAATTT  57 309
CXD79_RS02825  560604 ..  560659 + -13.9  -4.11216   CCAGTCTTGCCTATT GATGCCCTGCGCG-CCCTATCGTGGA CATAT TCGGCGCCAGGGCCGCGCAGGGCGAC TTTTAACCGTAACGG  85 77
CXD79_RS02830  562145 ..  562155 +  -8.2  -3.14132   GTCCGGCCAGCACTA                 GCGC GGC GCGC                 TTCGTCAGCGGCCGG  56 25
CXD79_RS02860  568039 ..  568058 +  -8.6  -3.68222   TGCCTATATGCATAT            TGTGAAGC GCGT GCTTCGCA             TTATTCAGATTCGCA  65 139
CXD79_RS02865  568374 ..  568395 +  -3.6  -3.86015   ATCCCGGCGGTCCGG           CGGCC-GCC ATCCG GGCTGGCCC           TTTATCCGCCCAATA  57 65
CXD79_RS02870  569538 ..  569552 +  -2.7  -2.69151   TTCCTGCCAGGAGTG               CGGCG ATGAG CCCCG               TAGTATCTGAAGCCA  40 82
CXD79_RS02875 NONE
CXD79_RS02880 NONE
CXD79_RS02885 NONE
CXD79_RS02890  573421 ..  573436 +  -7.5  -2.87132   CCGGTCTCGCCGCCC              CGGCG GCAAGG CGCCG               TATCTGCGAGGGGGG  52 139
CXD79_RS02895 NONE
        groL  575666 ..  575689 + -19.6  -4.86621   CTTCCCAAAAAAAAA          CCCCGCCAGG TTCG CCTGGCGGGG           TTTTTCATTGGAGCT 100 87
CXD79_RS02910 NONE
CXD79_RS02915  580421 ..  580434 +  -9.5  -3.53012   TCGTCCTGGACTGAG               CGGCG GCGC CGCCG                TTTCCAAGCGCGCCG  64 27
CXD79_RS02920 NONE
        pyrF  582623 ..  582658 + -20.4  -2.59748   TAAGAACGTAACCCC    CCGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCGC     TGACTTCTCAGGGTG  95 30
CXD79_RS02960 NONE
CXD79_RS02965 NONE
        phnD  590264 ..  590301 + -11.3  -3.02511   GGCCCGCGTGCGCGG   CCA-GTCGCTGCGCCG CGCGCGC CGGCGCATCGGCATGG   TGTTCCAGGAGTACA  62 261
CXD79_RS02980  591447 ..  591478 +  -6.7  -3.78329   TCAATACCTGGATGC      GGCGC-TTCGAT CCGGCCGAC ATCGAACGCGCC      TTTCAATTGCTCGAC  64 101
        phnE NONE
        phnE  593695 ..  593715 +  -3.9  -3.59979   TCAATTTCCGGGTTA            GCTTTGGGT ACT ATCCTAGGC            TTTCGGCTCGGCGGG  51 165
CXD79_RS03000 NONE
CXD79_RS03005  595573 ..  595591 +  -2.2  -3.53091   CCGGTGAGGGTGATG             GCGGCGTC GAA GGCGCGGA             TTTGCGCCAGCGCGT  47 262
        rsmD NONE
CXD79_RS03020 NONE
CXD79_RS03025  598052 ..  598076 + -15.7   -3.9941   CCTCCCCCCCTCGCG          GCGCGCCGG CCTGTCA CCGGCGCGC          TTTCGTTGTCGGCCA  91 59
        benE  599235 ..  599261 + -12.2  -3.57144   GGCCTACGACGGCCA         GCGCACCTCGGC CAT GTCGGGGTGCAC         TTTCAGGATCCGGCA  74 45
CXD79_RS03045 NONE
CXD79_RS03050  603419 ..  603435 + -13.7  -4.72272   CGCCTCAGAAAAAAA              GCCCTCC GCT GGAGGGC              TTTTTCGTGGGCCGC 100 49
CXD79_RS03060  605788 ..  605830 +  -3.3  -3.66874   TCGCCGTCGGTCAGC CTGAGCACGCGCGCGCGC GCCTGATA GCGC-CGCGCATAGTCGG TTTCGATGCGGTTGA  51 504
CXD79_RS03095  616046 ..  616060 +    -7  -3.41636   CGCCGACGTTCCGGG               CGCGCC CTC GTCGCG               TTCCTTGCCTTGCTT  56 172
CXD79_RS03100 NONE
CXD79_RS03105  618135 ..  618178 + -10.9  -2.57344   ATCAACCTCAACTGA CGGCA-GCCCG-GCGGGCGGC CCCG GCCGCCCCCACTGCCGTGCCG ATTGTCGCAAGACTG  59 26
CXD79_RS03110 NONE
CXD79_RS03115  620737 ..  620747 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 110
CXD79_RS03120  621930 ..  621943 +  -3.7  -2.71791   CAGGCCCTTCCTGCA               GCGGG CCGG CCGGC                GTTTCAACAAGACCT  41 204
CXD79_RS03130  622216 ..  622244 +  -3.8  -5.55769   CCAAACACCAAAAAG       GGAAGC-TAGCGG TTAC CTGCCGTGCTTCC        TTTTTTCTTGTAGCC  95 38
CXD79_RS03135  622348 ..  622367 +  -6.3  -3.94877   CTCCAAACACTTCAA            GGCCCGC CGCGTC GCGAGCC             TTCTTGTTCCAGGAT  64 35
CXD79_RS03140  622833 ..  622852 +  -7.1  -3.14468   CGTGATCCGGCCGTA            GCGCG-GC CCGGC GCGCGCGC            TTGCCTATAATGGCG  52 25
CXD79_RS03145 NONE
CXD79_RS03155 NONE
CXD79_RS03160  625542 ..  625554 +  -4.7  -3.54424   ACTGCCCTGGCTGGC                CGCCG ACA CGCCG                TTTCCCCCGGTCGAA  52 50
CXD79_RS03170  627052 ..  627089 +  -3.2  -3.00923   GCCGCCCTGAGCACG   CGCGGGGCGGCAAAGT CGATCT ACAATTCCGCCCCATG    TCTATCCTCTTCCAC  42 31
CXD79_RS03175  628160 ..  628172 +  -6.2  -4.74103   CCCGAGCGGGCATGG                GCCC CAAGA GGGC                TTTTTGCCTTGGGCA  82 49
CXD79_RS03185  630268 ..  630303 +  -8.8  -3.54424   GCGCATCGCGCGGCC    CGGCCGGCCGATCGGGC GAG GCCTGCGCGCCCG-CCG    TTTCGCGGAATGCGA  62 67
CXD79_RS03215  639141 ..  639158 + -10.5  -3.21218   TGCCAGTTGGCGCTT             GGGCGCG TTGC TGCGCCC              TTCCTGCTCGGGCGT  60 82
CXD79_RS03235 NONE
CXD79_RS03240 NONE
CXD79_RS03245  643628 ..  643640 +  -2.6  -3.07816   CGTCTCCACTAAGGG                CGGG TGGAT CTCG                TTGGCTGCCTCCAGA  41 29
CXD79_RS03250  645029 ..  645047 +  -6.7  -3.77832   TGTTGCGGCGCGCAT            C-CACCGG GTGG CCGGTGCG             TTCTTCGCTTTGCGC  61 313
        galU  647544 ..  647562 +  -4.4  -2.71924   GCGCTCGGTAAAGGC             GATGACCG CGC CGGCCACC             ATTTGCGGCGCCATG  40 299
CXD79_RS03280  651727 ..  651753 +  -9.5  -2.62184   CAGGCGCGCGCGCCG        GCTG-GCT-CGGC GGC GCCGAAGCGCAGC        TGCTGTACCGCCGGG  55 143
CXD79_RS03295  655624 ..  655638 +  -2.8  -4.09685   CGGAAAAGCGGCGCG               TGCC GGACAGG GGCA               TTTTAGGGGCTGGCG  59 521
CXD79_RS03305 NONE
        dusB NONE
CXD79_RS03315 NONE
        purH NONE
        ruvC NONE
        ruvA  661157 ..  661205 + -10.8  -3.30124   CGCGACCGCCTCCAG CGCGGCGGGCGGCGC-G-GCCAAC CCC GAGGGCGCGGCGCCGCTGGCCACG TTGTCGCGCGTGAGC  66 83
        ruvB  664514 ..  664548 + -14.9  -4.84359   GGTCGATGGGGTCGG    GCCGCGC-GCGGGCGC CCGC GCGCGAGCTGCGCGGC     TTTTTCTCGGCCTCG 100 272
CXD79_RS03360 NONE
CXD79_RS03365  668638 ..  668673 +  -9.1  -3.03124   AACGCATCGTAGTCC   TGCATCCAGGCGCGC CATTGCGC GCGCGCCTGG--GCA    TGTTCACGCATGGCC  55 336
CXD79_RS03380 NONE
CXD79_RS03385 NONE
CXD79_RS03390 NONE
CXD79_RS03395  673696 ..  673739 +   -21  -3.53091   CTACAAGATAGACTG ATCCCCGGGTGCCTGTCCCC GCAG GGGGACAGGCACCCGCTGAC TTTGCCCGCCAGGCT 100 25
CXD79_RS03400 NONE
CXD79_RS03405  676291 ..  676304 +  -2.4  -4.10144   CCTTGATAAAGCGCG               CGAT GCGCGG ATCG                TTCTTGTTGTCTTCA  58 151
CXD79_RS03415  678275 ..  678285 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS03420  679776 ..  679802 +  -5.9  -4.14243   TAGAGTGGGGTCTCT        GCAACACGTGCC CCAG GGCAC-TGTTGG         TTTTGCGCTGGAGTG  66 512
CXD79_RS03450  683568 ..  683581 +  -5.9  -6.06723   CACAGGATTGATCAA               CCGCT TTCG GGCGG                TTTTTTTTTCGCCCC 100 468
CXD79_RS03455 NONE
CXD79_RS03460 NONE
CXD79_RS03465  686960 ..  686994 +  -2.6  -2.74012   TCGGCACGCCATCGA     CCTGGTGCGCTACAGC AAC GGGGTGGTGCGCCGGA     TCATTGCGCTGCTGA  38 50
CXD79_RS03470 NONE
CXD79_RS03475  688319 ..  688343 + -15.7  -4.67038   CCTTCTTCTTTCTAA          GCCCTGCTGGC CGA GCCAGTGGGGC          TTTTGCTTTTGGGGC 100 77
CXD79_RS03480  689153 ..  689171 +  -3.9  -3.28924   GGCCGGCTTCGAAGG            CGACTTCC TCCA GGAA-TCG             TTCTACCAAGCCATC  47 186
CXD79_RS03495 NONE
CXD79_RS03500  691315 ..  691332 + -10.5  -3.65351   GCCGATTGACGGTTG             CCCCTGC TCAC GCGGGGG              TTTCCGTCAGCCTGC  70 43
CXD79_RS03505 NONE
CXD79_RS03510 NONE
CXD79_RS03515 NONE
CXD79_RS03520 NONE
CXD79_RS03525 NONE
CXD79_RS03530  693805 ..  693818 +  -9.5  -5.46657   GGGCGCAACTGGAAC               CCGCC ACAT GGCGG                TTTTTTATTGCCCTC 100 69
CXD79_RS03535 NONE
CXD79_RS03540 NONE
CXD79_RS03545 NONE
CXD79_RS03550 NONE
CXD79_RS03555  698196 ..  698216 +  -3.1  -5.32944   ATGAGTAATCCCGAA            CGCCGGGAT CTC GTCGCGGCA            TTTTTTCATTATCCG  89 33
CXD79_RS03560 NONE
CXD79_RS03565 NONE
CXD79_RS03570 NONE
CXD79_RS03575 NONE
CXD79_RS03580  703728 ..  703740 +  -6.2  -5.80817   CCAATGAATGAACGG                GCCC ATAGG GGGC                TTTTTTTGTGTTGAG 100 30
CXD79_RS03585 NONE
CXD79_RS03590 NONE
CXD79_RS03595 NONE
CXD79_RS03600 NONE
CXD79_RS03605  706511 ..  706531 +  -9.7  -3.54741   GAACAGCACGCGGTC            GCCAGCC TGAAAGC GGCTGGC            TTTCACCAGCTGCTC  64 405
CXD79_RS03620  707162 ..  707172 +  -8.2  -2.78216   GCACGTCGACCATGC                 CGCC CAG GGCG                 TCGTTCGTGACGATG  52 235
CXD79_RS03645  711044 ..  711062 +    -3  -2.65264   GGCGGGCGCCAGCCC             GCCCCG GCAGCCA CAGGGC             TCCTATCGATCGTGA  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB  714977 ..  714996 +  -2.8  -2.54325   CAACGTGGGGCCCTT            TTACCCGT TAAC ACGTGTGA             CTCTCTTTGCAAAGG  39 15
         pal  715547 ..  715576 + -21.5  -4.54727   AGCAGCCCCACCACG       CGTCGGGACGGTC ATCC GGCCGTCCCGACG        TTTTCGTTTCAGACC 100 56
        ybgF NONE
CXD79_RS03685 NONE
CXD79_RS03690  718227 ..  718254 + -10.5  -4.15453   ATAGGATGAGCACCT        CGC-CCGCCGCC AGCCC GGCCGCGGCGCG        TTTTCCGCTGACTTC  78 120
CXD79_RS03695 NONE
CXD79_RS03700  719624 ..  719635 +  -2.2  -3.21099   CCGGCCCTGCACTAC                GCGCG CCA CG-GC                TTCCTGGTCACGCCC  42 465
CXD79_RS03710 NONE
CXD79_RS03715  721739 ..  721793 +  -2.5  -2.70932   GCGCGCCAGCAGCCC GCCGGTCCAGGCCCGGCCCCAGGCCC GCAA GGTGTTGGCGCCGG-CGTGGCCCAGA TGCTTCCAGAACAGG  38 500
CXD79_RS03725  724903 ..  724917 +  -4.2  -3.64703   TGCGCGACATGATCA               GCGG CGTGTGC CCGC               TTTCGGTCAGCGCGA  51 297
CXD79_RS03735  727401 ..  727413 +  -9.1  -2.52464   GCCGCCAGCAAGGCG                TCGGC CAG GCCGA                TGAATTGCGCCACGC  51 100
CXD79_RS03755 NONE
CXD79_RS03760  734082 ..  734098 +  -2.2  -3.53012   CAAGGAGGCTGCAAC              GCGGTA TCCTC TACCAC              TTTGGCCCGAAGACA  48 94
CXD79_RS03765  735221 ..  735240 + -16.4  -3.15147   TCCGCCAGCCGGCAT            GGGCGGCG GACG CGCCGCCC             TGTCTATTGCTTGAC  81 388
CXD79_RS03790  738715 ..  738729 +  -3.4  -4.07687   CGCGCTTGGCGTCGG               CCTCGG AAA CCGGCG               TTTTCGCCGCCCGGT  60 247
CXD79_RS03825  747957 ..  747971 +  -2.1  -3.84406   CGCTCGCGCAGCGAC               GATTG CGGGC CGATC               TTCTTCTGGTAGGCG  56 430
        nspC  750882 ..  750901 +  -4.2  -3.18366   AGGATTACGTAGACA            GCCTG-TCC TGA GGAACTGGC            TCTGTTGATTGAAGC  45 15
CXD79_RS03845  752285 ..  752295 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 119
CXD79_RS03850  753404 ..  753430 + -10.1  -3.06133   TGCCGGCAGCGCAAC         GCTGTGGCCGT TTCGT ACGGCTACCGC         TTCAATCGAACATTC  60 130
CXD79_RS03855  754111 ..  754154 +  -2.8  -3.91897   GCATCACCATCGAGG CGGTCGCGGAAGCGGCGCGC TGAC GCCGGCCGCGTTCCCTACCA TTTGTACGTGACCCG  58 3
CXD79_RS03870  758809 ..  758825 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD79_RS03890 NONE
CXD79_RS03895  763490 ..  763518 +  -7.9  -3.07113   GGCCACGGCGGCAGC        GCGCGCGGCGGCG CTT CGCCACTGCCCGG        TTCCATCAGGTAGTA  52 295
CXD79_RS03905  765112 ..  765146 +  -8.5  -3.06183   TCGGCCAGCCATTGC     TTGCGCGCCGACC ATACCGGCA GGACCGCGCGCAA     TTCCGTGCCGATGCA  55 501
CXD79_RS03930  769546 ..  769566 +  -8.2  -3.12999   GCCGGGTATGAGTGT            GCGAGCCG CCGGC CGGCTCCC            TTACCTGTCGGATAC  56 101
CXD79_RS03935 NONE
CXD79_RS03940  770756 ..  770781 + -13.3  -5.15969   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG 100 108
CXD79_RS03950 NONE
CXD79_RS03955 NONE
CXD79_RS03960  777378 ..  777412 + -13.5  -2.99947   CATTGGGCGCCGCAC    GCCTGGCATCGGCGGC GCCG GCCGGCGAGGCC-GGC     TATCTGTGAAGATTC  70 152
CXD79_RS03970 NONE
CXD79_RS03975  780940 ..  780955 +  -7.5  -3.14211   GGTGCCCCGGCCTCG              CGGCG CGTATC CGCCG               TTGCTCGCGCGCAGT  54 62
CXD79_RS03985  781904 ..  781925 +  -2.1  -3.07291   CTGAGCGCTACACAC           CGGTTGCGT CGGT GCGAATCCG            TTCAATCGACTACTT  41 161
CXD79_RS03990  787090 ..  787118 +   -11  -3.31779   AAGCGCCGTGAATCA       CGGC-CCGCC-TGC CTC GCGCGGCGGCGCCG       TCTCTTTGCGTTCTT  66 40
CXD79_RS03995 NONE
CXD79_RS04000 NONE
CXD79_RS04005  792038 ..  792062 +  -2.7  -3.59979   CGCCTAAGGAGTAAC          CCTGCAAATCG CCG CGTTATGCAGA          TTTCGCATAACCGGC  49 27
CXD79_RS04010 NONE
CXD79_RS04015  794118 ..  794134 +  -6.5  -3.54424   ATATCAATGGAACTG              GGGCG TGCTGTT CGCCC              TTTCCCCGGATGGCG  56 129
CXD79_RS04025 NONE
CXD79_RS04030  796311 ..  796327 +  -7.9    -3.273   CCGTTATCCAATACT              CAGGCGG TAG CCGCATG              TCTTCCCTTTTCTAC  56 41
CXD79_RS04035  797657 ..  797670 +  -2.3  -3.44848   CGCTGTTGACGTAGA               AGACG TGGA CGTCC                TGTTTGGTGAAGCCC  47 497
CXD79_RS04060  802288 ..  802307 +   -15  -3.14564   CCGGCGAGCAAGCCC            CAGGCGGC GCCG GCCGCCTG             TTGCTCCCGCCATGG  76 151
CXD79_RS04065  803658 ..  803676 + -10.2  -3.04461   GTCGCCGGCGCGCAG             CGCGGCGA GGA TCGCGGCG             TGTTCGGCCTGGGTC  59 182
        pepN  819367 ..  819379 +  -3.3  -2.74192   AAAGCCTTGGATCTG                GCTGC TTA GGAGC                TACTCTTGAAACGTA  40 17
CXD79_RS04135  820570 ..  820604 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS04160 NONE
        serB  827105 ..  827127 +  -6.1  -3.16039   TCGCGACGGCCTCCC           GCCGCCCGG CCGGC CCGCGCGCC           TTACTCCGGCTGCTT  51 131
CXD79_RS04175 NONE
CXD79_RS04180 NONE
CXD79_RS04185  832270 ..  832286 +    -3  -4.11484   CATCGATTGCGGCTC             CAGCACC AGCC GGT-CTG              TTTTCAGCACTTGCC  61 509
CXD79_RS04285 NONE
CXD79_RS04290 NONE
CXD79_RS04295 NONE
CXD79_RS04300 NONE
CXD79_RS04305  856485 ..  856501 +  -2.1  -3.05384   GCTCATGCTCGCGCG              TTGACGC GCA GCGCCCA              TTCGGTGACGGCCAC  41 22
CXD79_RS04340  863758 ..  863791 +  -6.9  -3.09516   GGTAATCTCGCTTTG     ACTAATTATCCAAGA ATAT TCTTTGATAATTAGG      TTGCGTCATGAAAAG  52 108
CXD79_RS04345 NONE
        mexI NONE
CXD79_RS04355 NONE
CXD79_RS04360  870421 ..  870431 +  -3.2  -3.28712   GCGTATCGCCGGCCT                 TCAG GTA CTGG                 TTGTCCAGGCCCGCG  47 239
CXD79_RS04375 NONE
CXD79_RS04380 NONE
CXD79_RS04385 NONE
CXD79_RS04390  878362 ..  878413 + -12.9  -2.53876   CGATCGCCTCGGTCA GGAACTGCGGCGCGTCGCCGCGCA GCCGG TCCGCGCCCA-GCGCCGCGGTGCC TCCCTTCAGGTAGGC  62 232
        lrhA NONE
CXD79_RS04420  885891 ..  885909 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 303
CXD79_RS04455  894883 ..  894920 +   -12  -3.05816   ACTGGGTAGCCTGCC   GCAGCGACGCGAAC-GC GTGCA GCTGTTCGAGGCGCTGC   TTCCATGAGCGCTCC  66 470
CXD79_RS04485  900395 ..  900405 +  -4.6  -4.07568   GGGTGCACCATCAAA                 CGGC ACC GCTG                 TTTTCCCCAGGCCCG  62 31
CXD79_RS04490  901469 ..  901508 +  -2.8  -3.90291   TCGACCACGGTCTTC  TCGATTTCCAGCAGGACCA CGA TGG-CATGCTCGATATCGC  TTTCGTTGACCAGCT  56 434
CXD79_RS04500  903592 ..  903602 +  -4.6  -3.36327   CGGCCGCCTCGACAT                 TGCG CGC CGCG                 TTGTAGATGCGCTGG  49 255
CXD79_RS04525  908034 ..  908048 +  -2.1  -2.50816   AGCCCCAGCGGCCGA              GG-TCC TGCA GGATCC               ATTCGTAGATGACCA  37 520
CXD79_RS04555  914397 ..  914408 +  -7.2  -2.52623   TGCGTGGCCCCGGGC                CGCC CGTA GGCG                 ATGTTCTCGGCCAGC  48 497
CXD79_RS04565  916813 ..  916829 + -11.5  -2.77013   GAACGCCTGGGCTGA              GCGCGGC GAT GCTGCGC              CTTGTTACCGACATC  62 26
CXD79_RS04570 NONE
CXD79_RS04575  917320 ..  917339 +  -4.2  -4.00042   GACTACCCCGATACC            GGCCGT-TG AAC CGCGCGGCC            TTATTTGCTGCGCAC  59 17
CXD79_RS04585  919358 ..  919372 +  -7.1  -2.70932   AAGGTCAGCGTGCTG               CCGCT GTCGA AGCGG               TAGTTCAGCGCCGGC  49 365
CXD79_RS04600  922253 ..  922281 + -16.9  -5.53288   CGGCCAGACCGGAAA        TCCCATGCAGATC ACT GATTTGCATGGGA        TTTTTTTCGCTTCGG 100 59
CXD79_RS04605  925391 ..  925449 + -29.8  -3.25072   TTTCATCCCCTGTCC TGAAGC-CGGCCATCCGGCCG-CCGCGGC GCAA GCCGCGGGCGGCCGGATGGCCGCGCC-CA TTCCGTTCTCCTCCC 100 49
CXD79_RS04610 NONE
        accB NONE
CXD79_RS04620  928934 ..  928954 +  -3.9  -2.93853   AACACATTTCGTTCA            CGCGACC CTGAACC GGTCCCG            GTTTCGTTGCCACGG  43 15
CXD79_RS04625 NONE
CXD79_RS04630 NONE
CXD79_RS04635 NONE
CXD79_RS04640 NONE
        accC NONE
CXD79_RS04655 NONE
CXD79_RS04660  936009 ..  936027 +  -6.7  -4.11216   CACCCGCCGACGTCG            CGCGTTGC AGCC GCA-CGCG             TTTTGCAAGTAACGG  67 137
CXD79_RS04665  936349 ..  936364 +  -3.2  -3.10775   GTTATCGTCGCGGTT              GCGC CACCTGGA GCGC               CTTTTGCATGCGCGT  44 105
CXD79_RS04670  937575 ..  937587 +  -6.3  -2.88544   CGAAATCCTTTACAA                TTTGG CTA CCAAA                TGTGTAGGAGTGGAC  48 93
CXD79_RS04675  937831 ..  937852 + -17.3  -3.84451   TTGAGGGGCGCGCGA           CGGGCAGCC GGCA GGCTGCCCG            TTTGCATTTCGCCCG  95 37
CXD79_RS04680  938312 ..  938322 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 73
CXD79_RS04685  939384 ..  939420 + -15.7  -3.14132   CATGCCACCGGCATC    CGGCCGCTCGTCGACCT GCA AGGCCGTCAGGCGGCCG    TTCCTGCACGGGCCG  77 82
CXD79_RS04700 NONE
CXD79_RS04705  943558 ..  943570 +  -9.1  -3.17075   GGCCTATGCGCCGCA                TCCGG TGG CCGGA                TTCGCTTAGCCGCCG  59 4
CXD79_RS04720  946094 ..  946127 +  -5.8  -3.62046   CTGCCCGGGCTGCTG     CACGCGCGCGGGCG CGCCGT CGCTGGGGCGCATG      TTGTTCAGGAAGTCG  57 255
CXD79_RS04745  952771 ..  952781 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS04750  954052 ..  954103 +  -9.2  -3.21099   GGCCGGAACGTCGGG CAGCG-CCGGCGAGCGCTTGCGG CTCGTGA CGGCCAGCGCGCGCAGGTCGCCG TTCCTGATCAGCGGC  56 292
CXD79_RS04760  956005 ..  956036 + -11.6  -2.81133   TACCCACGCAAACGA      GAGCCCCGATACGGA TTG TCCA-GTCGGGGCTC      TCTGCTGGGTGCGTC  63 238
CXD79_RS04770 NONE
CXD79_RS04775  957807 ..  957832 + -18.3  -4.55798   TTAACAAACTATTTT         GCCCCGCGCGA GGTG TTGCGCGGGGC          TTTTCATTTCCCCTC 100 291
        gyrA NONE
        serC NONE
        pheA  967314 ..  967365 +  -4.5  -4.84761   GGCGTGGTTGACGCA CACCA-GGCGGCCGCCGTGACGGA GCGTGTG TCCGTC-CGGCG-CTGCCATATTG TTTTTCTGCAGGTAT  82 47
CXD79_RS04830 NONE
        aroA  969609 ..  969622 +  -3.1   -3.6692   GCGGGACTGAACGGC               GCC-TG CCC CATGGC               TATTTTCGCATCCGC  53 31
CXD79_RS04840  970291 ..  970301 +  -6.8  -3.91984   TCTGGTGCGCCTAGC                 CACG GCG CGTG                 TTGTTTCGGCAGTAT  66 27
CXD79_RS04845 NONE
CXD79_RS04850  972595 ..  972624 + -16.6  -5.00616   TTGGTGTTCTACCGG       CAAAGCCCCTTG CTTGTT CAAGGGGCTTTG        TTTTTTCGGGCCGGC 100 67
CXD79_RS04855  973093 ..  973107 +  -3.4  -3.56092   TACTTCCTACCGAGA               GCCCGC GCT GTGGAC               TTTGAACCCTGGTGG  49 59
        lapB NONE
       rfaE1 NONE
        rfaD  976253 ..  976277 +  -4.2  -3.40597   CTGAAGTAGCGGATT         TGC-CCCGGGT AATT GCCCGGGTGGA          TGTTTGCGTGCACCG  49 32
CXD79_RS04875  976900 ..  976910 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS04880  977958 ..  977980 + -14.1  -3.78934   GCCAGCGCGGCTAAA           CCGCCTCGG CCGAT CCGGGGCGG           TTATTATCGGCGGCA  83 69
        cysM  979242 ..  979291 +   -17  -3.01712   CCAGCGGCGCCGGAT CGGCCGGCAGCGCGACCGGCGCG AACAC CG-GCAGGCCGCGCTGCCAGCCA TGTTCGACCAGGAAG  82 361
CXD79_RS04895  981074 ..  981089 +  -7.5  -3.08006   ATTGTGCAATGCGGT              CCCGG GTTTCG CCGGG               TAATTATTGTTATTT  54 53
CXD79_RS04900 NONE
CXD79_RS04905  982823 ..  982842 + -16.4  -5.75945   CACGCAGAGAGAAAG            CCGCGGGC TGTC GCCCGCGG             TTTTTTTTCGGCCAT 100 52
CXD79_RS04910 NONE
CXD79_RS04915  985611 ..  985626 + -11.8  -5.86332   CCGCTTCGGCGAGAA              CGCCCC GCAA GGGGCG               TTTTTTTTGCCTTGG 100 46
CXD79_RS04920  986884 ..  986900 + -11.5   -3.5944   GCGCGGCGCCAGCGC              CCCGGCG TAT TGCCGGG              TTTCGGCATCTCGAT  72 95
        cysA  989954 ..  989987 +  -5.1  -2.71712   CCTCGGCGTGCTGGA     CGCGGTGGCCACGCGC TAC GGGCGCG-CCATCACG     GTTTACCGGCCCGAC  45 264
        cysD  991726 ..  991737 +  -3.6  -3.90048   GGCATCACCATCGAT                GTGG CCTA CCGC                 TATTTTTCGACACCC  59 330
CXD79_RS04955  994238 ..  994258 +  -4.5   -3.6215   GCCAGTGGTAGGGGG            CCGCGCCCG TCG CGGCAGTGG            TTTGACATGCATTCG  52 80
CXD79_RS04960  994778 ..  994793 +  -4.6  -4.62069   CCAGGCAGCCAGCCA              GTCGGC CTAT GCCTAC               TTTTTCCCGTAGCAG  75 86
CXD79_RS04970  996339 ..  996390 + -22.6  -2.87132   TTTGTGTCTGGCACG GCTTTCCGCAATAAAAGGGCACCC GCAA GGGTGTCCTTTTATTGCGAAAAGA TATCTGGAAGAAAGC 100 81
CXD79_RS04975  997254 ..  997271 + -14.1  -5.14563   ATTCCCGATCAGTAC             GGCGCGC CGTG GCGCGCC              TTTTTTCATCCCGGC 100 60
CXD79_RS04985  999638 ..  999656 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 244
CXD79_RS05005 1003489 .. 1003521 +  -3.4  -3.80733   AGCGGCCGCCGCCGG      CCCGGCGATT AACGCAAATTTAA AAACGCCGGG      TTATTCTGGCCTGCC  56 69
CXD79_RS05020 NONE
CXD79_RS05025 1009801 .. 1009831 + -25.6  -3.55444   CGCGGCCGTCCAAAA       CAGACAGGCCGGCA AGA TGCCGGCCTGTCTG       TTTGCGCAGTGGCGA 100 46
        aceE NONE
        aceF NONE
        lpdA 1022958 .. 1022981 + -18.2  -2.52464   CGCGGCATGGCAGCA          CAAGGGCCCC TCGC GGGGCCCTTG           TGCGTTGGCGCGGCG  85 45
         tkt NONE
         gap 1029452 .. 1029494 + -21.4  -4.07568   CTGAACAGGGCGCAA GGGCCAGGTTGGTTTTCCCG TCA CGGGGAAACGGATCTGGCCC TTTTCGCAGGCAGGC 100 51
         pgk 1030939 .. 1030954 +    -6  -3.01712   TCGAAGCCGGTGATG              CCCGAG GCGG CGCGGG               TCTTGAGCGGCCCGG  48 227
CXD79_RS05145 NONE
CXD79_RS05150 1040877 .. 1040893 +  -2.1  -3.01712   TCTCTTGCTACCCAT              GCCATGC GCA GCAAGCC              TATTGACGCGCCCGG  41 68
CXD79_RS05155 1042255 .. 1042289 +  -6.3  -3.64487   GCTGCAAGTCGGCGC    GCTCGCGCG-CCGGCA GGCC TTCCAGCCGCGCGACC     TTCTTGGCCGTGTCG  59 456
CXD79_RS05165 1044155 .. 1044180 +  -3.9   -4.7416   CGCCGCCCGGCAATA         GGGCGTGCGCTA TAG TGG-GCGCGCCG         TTTTTCAGATTTTCA  77 25
CXD79_RS05170 NONE
CXD79_RS05175 1045640 .. 1045650 +  -8.2  -3.02511   GCCGAGGCCGAACGC                 GCGC CGG GCGC                 TGTTCAGCCGGTCGG  55 264
CXD79_RS05190 1047641 .. 1047665 +  -7.8  -3.93369   TGGCACACGCGCGCC          TCGGTGACGT TGAGC ACGGCGCCGA          TTTCCTTGAGGTTCA  67 436
        flhD NONE
        flhC 1049659 .. 1049699 +  -4.6   -2.7386   AAAAGCACCAGAAAA CCCCCCATAACCCG-CG TTTTTGCC CGACGGGTCAGGGGGGA  TCATTGGCGTCGGTT  43 64
        motA NONE
        motB NONE
CXD79_RS05220 NONE
        cheA NONE
        cheW 1054583 .. 1054605 + -12.7  -3.90856   TGACGGCGGTCAGTC          CG-CGGGCGG TGCG CCGCCCGTCG           TTTCGTTCAACGCTT  82 38
CXD79_RS05235 1056666 .. 1056701 +  -7.5  -2.82516   ACTTTCCCATCCTGG    CCGATTTC-GCGCGCC AGCGC GGCGGGCCGGTATCGG    TGTGGTGCTGCGCCG  52 341
CXD79_RS05245 1058260 .. 1058299 +  -2.1  -4.43909   CGACCGCGGGCATCG CGTTT-GACGCCCCGGTCC CAAC GGAGCGG-GCGTCCGGACA  TTATTTTCTTGGAGT  67 19
        cheY NONE
        cheZ 1059530 .. 1059548 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 206
CXD79_RS05280 1062509 .. 1062532 +  -6.6  -3.68351   TGATGCCGGTGTTGG          TGGCG-GCCAC CAT GGGGCGCGCCG          TTTCCATGGTGCGCA  61 231
        dacB NONE
CXD79_RS05350 1078151 .. 1078165 + -11.4  -6.34424   CCGCCCACAGGAAAA               CCGCCT TGC AGGCGG               TTTTTTTTTTGCCGC 100 59
CXD79_RS05355 1079521 .. 1079545 +  -3.4  -3.34398   CCCTGGCCTGCGGGG         CGGGACCGGGC ACAG GACCGG-CGCG          TGTTTCGCGCACGAC  46 77
CXD79_RS05360 1082566 .. 1082580 +  -2.7   -4.2679   GCGAGGAGGGTCTAT               CCCCC GCGGA GGAGG               TTTTCCTGGAGCTTG  63 42
CXD79_RS05370 1085014 .. 1085057 +  -8.6  -2.66316   GATTACGCAATTGAA GTAGCACCCCGTAGCACGCG GGGG TGCGTGGCGCGGGGCGCGGC TGGTATGATGAACGC  52 22
CXD79_RS05375 1085412 .. 1085464 +  -7.4  -3.66999   GCCTGCTGATCAGCC GCCGCTGATCACGGCGGGGCGGGC CGCGC GTCCGCCCCGGCATGCACAATGGG TTTGCGTAGATCGGT  63 18
CXD79_RS05380 NONE
CXD79_RS05385 1086355 .. 1086376 +    -5   -3.7282   GGGCGTGCCCCATTC           GCGGCTGG TTTCGC CCGGCCAC            TTGTTGGTGGCGTCC  58 146
CXD79_RS05395 1089132 .. 1089152 +  -3.1   -4.4017   CCAGCGTGGGCGCGC            AGATCGCCA GGC TGGCGGCCA            TTTTCTCGACCTTGG  68 422
CXD79_RS05410 1090903 .. 1090919 +  -4.4  -3.27704   GTAGCATCTTTCCGG             CG-TGCG CTGC CGCATCG              TTCACTTTCGCAGCT  49 89
CXD79_RS05415 1093502 .. 1093516 +  -3.4  -2.62184   GGCGGCTGTGGGCCT               CGCTGG AGA CCGGCA               TGGTGTACCGGGCCG  39 283
CXD79_RS05425 1095111 .. 1095145 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 221
         ppx 1104167 .. 1104201 + -21.4  -2.52464   CCTGAAACCCGATCT     CCGGGAGCCTGTCCCC GAA GGGGACTGGCTCCCGC     TGACTTCCGGGGAGC 100 36
CXD79_RS05495 1111004 .. 1111029 + -10.3  -3.53012   GCGATAGTACTTGAT         CTGGCCGGCCT GGAC GGGCCCGCCGG          TTTCAGGCGGGCCGC  67 34
CXD79_RS05500 1112491 .. 1112505 +  -5.6  -3.02144   CCGACGCGCAGGGCA               TGAGCC TGG GGCCCA               TGTTGCGCGGCCTGG  47 419
        dusA 1116049 .. 1116083 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS05545 NONE
CXD79_RS05550 1120577 .. 1120587 +  -3.2   -3.7614   GACTGGGCAGCTGGG                 CTGG AAG TCAG                 TTGTTCGTCCTGATT  56 2
CXD79_RS05555 1121618 .. 1121649 +  -9.4  -3.03243   CCAGTCCGCTGCCGG      GCGTTTCGCGGTGGG CGG CCCGCCG-GTAATGC      TCTTCGAAGATCCGT  55 174
CXD79_RS05565 NONE
CXD79_RS05570 1126444 .. 1126466 +  -5.5  -3.72324   CGCCGGCTGGCGGCG          CA-GGCGGCC TGAT GGACGCCCTG           TTCTTCCTGGAGGTG  57 14
CXD79_RS05575 1127547 .. 1127566 +  -6.4  -3.73775   GGCTATACCGGGCTG            GTCAGCCTG GGG CAGGC-GGC            TTTCATGGGCCTGGG  59 239
CXD79_RS05585 NONE
CXD79_RS05590 1130154 .. 1130168 +  -3.5  -2.78384   TCAAGCACTACAAGC              GCC-GC AAGC GCTGGC               TGTCATGACGCGCGC  41 3
CXD79_RS05595 1132063 .. 1132084 +  -2.9  -3.12351   GCAGGCAGGTGGCGG           TG-CGTACCG GCG CGGTCCGGCG           TTGCGTATCCAGCGC  44 50
CXD79_RS05600 1133228 .. 1133265 +  -7.6  -2.73364   CGAGCGCGCGGATGT   AGTCGGCGTCGAAGTA CATGGC TTCTTCGTCGCCGGCG    TCCTTGGCCTCGACC  49 504
CXD79_RS05635 NONE
        lolD NONE
CXD79_RS05645 1142105 .. 1142136 +  -4.2  -3.78775   CAGGGCGGCGACGCC      CTGACGCCCGGCCGT CCG GCG-CCGGGCCCCTG      TTTCCTCCTGCCCGC  57 22
CXD79_RS05650 1145704 .. 1145728 + -12.8  -6.34424   TCCGCCCGTTGTTGG          CCGCCTGTCG TGTAT CGACTGGCGG          TTTTTTTTTTGCCGC 100 109
CXD79_RS05655 1146227 .. 1146245 +  -3.8  -3.60762   GTAGGCGAAATCCTC             GTCAAGTC AGC GACTTCGC             CTTTTTTGGCCACTC  51 187
CXD79_RS05660 1150293 .. 1150321 +  -9.4  -2.87132   ACTAAGCGCCGTAAG        ACGGGGGGCGCC GATGG GGCGCCTCCCAC        TGTCTGGCGAGCAGG  56 36
CXD79_RS05670 NONE
CXD79_RS05675 1154974 .. 1154988 +  -2.7  -3.02263   CGGAGCGCGGCGAAG               CCGCG CTACC CGAGG               TCTTGCAGGACCTCT  42 53
CXD79_RS05680 1155879 .. 1155902 +    -8  -3.09015   CGCGCCTTTCGCGCC          GGGCCGTTGG CGCC CCGGCTGCCC           TTGAATCCCTATGCA  54 43
        greB 1156699 .. 1156733 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 241
CXD79_RS05715 1164116 .. 1164134 +  -5.2  -4.42081   CAGGCAGGGAAGCGG             GCCGCAGT AAA ATTGCGGG             TTTTCCCTTTATGTT  72 16
CXD79_RS05725 NONE
        odhB 1170699 .. 1170755 + -12.9  -3.74693   GAAGAATGCCTTCTT CTGTCGCTGCCGCCAAGGGCCGGGCCGC CATC GCGGCCC-GCCC--GGCGGCCCTGCCGG TTTCGTCGAATCCGG  79 58
        lpdA NONE
        zapE 1173601 .. 1173617 +  -3.5  -3.14132   TCGGAAGCCAGGAAG              GCCACCG TGG CGGCGAC              TTCCTCCGGCAGGCC  45 114
CXD79_RS05750 1175439 .. 1175473 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS05785 1180986 .. 1181014 + -19.6  -2.53876   CGGGGCAACGACGCA       GGCGCCGCACCCG ATGA CGGG-GCGGCGCC        TGCGTTGCGATCAGC  93 67
CXD79_RS05795 1185659 .. 1185677 + -11.6  -3.91911   CCGCGCAAAAGGAAA             ACCCGGCC TGG GGCCGGGC             TTTCCTTGGACTGCG  81 44
CXD79_RS05805 NONE
        pgeF NONE
        phaC 1190062 .. 1190081 +  -4.8  -3.61894   CGGTTTGAGTACGCG            CGCGGGCC GCAA GGCCGGCA             TTCTTGGCGGGCGTT  52 33
        phbB 1190878 .. 1190906 +  -9.6  -3.04263   CGCATTCGGAGGGGG       CCGGG-GTCCG GGGGGAAG CGGACGCCCGG        TATTACACGTAAAAT  57 44
        phaR 1191564 .. 1191583 + -16.4  -4.24204   CTGGCTGAAGGAAAA            GGGGCGCC CACG GGCGCCCC             TTTTCCGTATGAGTC 100 52
CXD79_RS05830 NONE
CXD79_RS05835 NONE
CXD79_RS05840 NONE
CXD79_RS05845 1194878 .. 1194892 +    -7  -2.79183   CATCTGGTAGCGCGG               CCACGC GCG GCGCGG               TATGGTGGCGGTCCC  48 31
CXD79_RS05850 1195866 .. 1195876 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS05855 1196970 .. 1196992 + -11.9  -2.50816   GTAGCCCGGCCCATA           GCGCGCCCG CGGTC CCGGCGCGC           CTTCGTCGCTGCCGC  58 115
CXD79_RS05880 NONE
CXD79_RS05885 1202293 .. 1202311 +    -3  -3.58396   GCAGGCATTGCCATA             CGCACTGG GCA CGAGTGGG             ATTTTTAATTTCACG  49 56
CXD79_RS05890 1203979 .. 1203995 +  -6.5  -3.39895   CGCGGAACCAACATG              CCGGC CCACAAA GCCGG              TTCATTGCTACACCG  55 167
CXD79_RS05895 NONE
CXD79_RS05900 NONE
CXD79_RS05910 1208650 .. 1208662 +  -3.3  -3.35679   GGCGAACGGCTCGAC                CACCA GAT TGGGG                TTGTCGATGGGCAGC  47 465
CXD79_RS05920 NONE
CXD79_RS05925 NONE
CXD79_RS05930 1211776 .. 1211811 +    -9  -3.14132   GCACGACGGCCAGCG   CTGAGCCGG-CCGGCG CGCCTA CGCCGGGCCAGC-CAG    TTCGTCGGCCAGCGC  59 22
CXD79_RS05940 1214122 .. 1214139 +  -5.5  -3.34398   AGACGCTGCCTGTAA             GCCGC CGACCGTT GCGGC              TATTTGGCCGCGCCG  51 86
CXD79_RS05955 1216697 .. 1216736 +  -9.4   -3.5361   CCTGGGCGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD79_RS05960 1217763 .. 1217803 + -16.2  -2.71011   TATTGACAGTTCACA  GCTAGCGCGGCGCTAT CCGCATACC ATAGCGCCGCGCCGGC  TCGTTGCCAAGGCAT  77 21
CXD79_RS06005 1225646 .. 1225692 +  -5.1  -2.97188   GCTCGCGCGCATCCC TGGCG-GATGCGCGGGC-CGG ACCGGCC TCGAGCCTGCGTGGCGCGCCA TGTCTCGTCCTGTCC  47 111
CXD79_RS06010 1226582 .. 1226628 +  -5.1  -3.29461   GGATCGGCGCGGCCG CCCT-GGATGCG-CAGGCATAGC GCC GCGGCGCATGGCGTATCCTAGGG TTATGCAAAGACTTC  51 6
CXD79_RS06015 1226879 .. 1226920 +  -4.3  -4.08216   TGCTCGGCCAACGGG CCG-CTGGGCAGGGTGCCGT CTT GCGACATCATGGTCAGCCGG TTTTCGCCGACCTGG  60 73
CXD79_RS06025 NONE
CXD79_RS06030 1228925 .. 1228965 +  -6.6  -2.78596   CCGGGCTACCATAGG CGCAGCCATCCGGCGGCCG CCAT CGGCCGCCCGGCG-CACCG  TATCGTCACGAGGTA  47 111
CXD79_RS06035 NONE
CXD79_RS06040 1229565 .. 1229588 +    -3  -4.07568   CTGACCTTCTGCGCC          GCGCCGGC GATGGTAA GCTGGCTC           TTTTCCGCGCGGCCG  59 37
CXD79_RS06045 NONE
CXD79_RS06050 1230810 .. 1230839 +  -7.7  -3.21395   GCCCCCGCGCCAGCC       GC-GTGGCGCCTTG CGC CTCGGCGCCGCAGC       TCTTGTCCAGCAGCT  53 277
        clpB 1235450 .. 1235473 + -13.2  -5.48063   CGCCGCGTCTCTCAA          CCCCTGGATCC AAT GGA-CCAGGGG          TTTTTTCTGTTCGCT 100 69
CXD79_RS06075 1237211 .. 1237240 +  -4.9  -3.05384   CGGCGATCGCGTGAT       CAGC-GGGATCCTG CAG CAGGACCTCGGCAG       TTGGCTGGCGCCGGA  45 123
CXD79_RS06085 1241290 .. 1241323 +   -11  -2.68942   GCTTGAGGGTGTCGA     CGCGATGC-CCGCGC ACCAG GCGCGGCGTATCGGG     GTTCTGTCCGGCGCT  59 388
CXD79_RS06095 NONE
CXD79_RS06100 NONE
CXD79_RS06105 1244467 .. 1244499 +  -9.7  -3.05463   GTCAGGCGCGGCTGT      TGCGGCCGGCGGG GCGGCAG CCCGCCGGCAGGG      TTGCCTGCCGCACAT  57 47
CXD79_RS06115 1246951 .. 1246972 +  -8.6  -5.47218   GGCCAGGTGCTGCGC           GCCGGCGC CTGAGC GCGCCTGC            TTTTTTTCCCTACGC 100 14
CXD79_RS06120 1248321 .. 1248336 +  -7.5  -3.14132   GTTGCGCCCGTGGCC              GGCGC TGCGGC GCGCC               TTGATGAGGGCGCGC  53 377
CXD79_RS06150 NONE
CXD79_RS06155 1254310 .. 1254321 +  -7.2  -4.15565   ACATGTTTCGTGGGC                CCGC CTGG GCGG                 TTTTACGGTACTCAA  67 77
CXD79_RS06160 NONE
        crcB 1255281 .. 1255323 + -13.2   -3.6502   GGCTGGGGCTGGCGA CCGTGCGCCTGCTGTTGCGC TGA GCCCGGCGGCGGGCGCCAGG TTTCAGTCCGGCGTG  79 3
         alr 1259619 .. 1259642 +    -8  -2.56596   GAGCATTGTGCGGAT          CGCCGGCGGG CCGG CCTGCTGGCA           TGAATTGCTACGCAA  50 39
CXD79_RS06190 1260663 .. 1260685 +  -5.5  -4.45399   AGGCCGGATCGTCAC          GCTGGC-GCG CTGA CGCCGCCAGA           TTTTCCTGTTGCTGT  72 215
CXD79_RS06200 1262423 .. 1262469 + -12.9  -2.73875   GCTCGATGGCCAGTT GCAGCCGGCGGCGCTGCTG GAACTCGGA TAGCCGCGCCTCGGGCTGC TCGTGTTCGGCGGCG  63 213
        radA 1266100 .. 1266110 +  -4.6  -3.13299   CGTTGATGGCACGTC                 CGGG GAG CCTG                 TCTTGAGTCTGCTGG  47 35
CXD79_RS06220 1266980 .. 1267000 +  -6.7  -3.58905   CAACGAATTATAGGT            CACGCGGCA TTT TGCCGCGCC            TTGTATGTGCGGGCT  58 119
CXD79_RS06225 1267542 .. 1267563 +  -2.1  -3.53012   CATCCTCCCAGCAGG           CCGACGCCGC CCA GCGCCA-CGG           TTTGCAGCACCAGCG  47 295
CXD79_RS06260 NONE
CXD79_RS06265 NONE
        maiA 1275520 .. 1275541 + -17.3  -5.67063   GCGCCCAAGCAAAAA           GGGCAGCCC GGAT GGGCTGCCC            TTTTTTTCTGGTGCC 100 45
CXD79_RS06280 1275925 .. 1275946 + -12.3  -5.09762   CGTCGACACAAAAGG           GCCGTTCAC GCAA GTGAGCGGC            TTTTTGTATTGCGCT 100 77
CXD79_RS06290 1277930 .. 1277950 +  -6.7  -4.14392   TGGGCGACGATCACG            GTCACGGGC GCG GCCAGTGTC            TTTTCCAGGTTGCCG  69 417
CXD79_RS06300 1279263 .. 1279289 + -12.2  -3.85698   ATCAAGACATTACAG         CCGGCCTGGCGT GCG ACGCCAAACCGG         TTTGTCCGGGCGGCC  81 92
        scpB NONE
CXD79_RS06315 1283448 .. 1283467 +  -9.3     -6.13   GGCCAGGCAATACGG            TGGGCTG GGCGTG CAGCCCA             TTTTTTTTTGAGTGT 100 453
        rimP NONE
        nusA NONE
CXD79_RS06330 NONE
        rbfA 1288948 .. 1288977 +    -5  -2.60341   TGTTCCCGACGAGCC       CGAAGACCAGTCC TGACC GGGCTG-TCGTCG       CTGCTTTTTCTCCTT  42 10
        truB NONE
        typA 1291620 .. 1291646 + -22.4  -4.65895   GCGGTGCCAGCGCAA         GGGTTGTGGCCG TGG CGGCCACAACCC         TTTTTACATGCAGCC 100 66
        polA 1296331 .. 1296356 + -17.5  -2.69151   GCGCACTGATGCGGC         CCCGGCCGGCG TCCG CGCCGGCCGGA          TACTGTCTGACAGCC  80 32
CXD79_RS06370 NONE
CXD79_RS06375 1298122 .. 1298147 + -21.9  -2.52676   ACCTGTAGCGGGCCG         GGGCCTGCCCG TGCT CGGGCAGGCCC          TCAGTTGCCCGCGTC 100 33
CXD79_RS06385 1301460 .. 1301511 +  -7.2   -4.8048   ACAGGCACGCCGGGG TTGGAGTTTGCGGGTGCCAGTCCCC TGC GGGGACAGGCACCCG-GGGTTAGAG TTTTTCCTCTACCCC  84 117
CXD79_RS06415 NONE
CXD79_RS06420 NONE
        parC 1315667 .. 1315682 +  -8.2  -3.22475   GTGCGTCCCAGGCAG              CCGGTG CTGT CGCCGG               TGTTCTGAGCGTGAA  58 2
CXD79_RS06430 1317073 .. 1317107 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS06455 1320729 .. 1320757 +  -8.7  -3.29144   TGACCAGCAGGTTGG        CGCCCGTGTCGTG CAG CACCACCCGGCCG        TTCTCCAGCACGTAG  59 157
        ugpB 1329902 .. 1329932 + -21.1  -3.18118   TTGGCCTGTGCCTGT       AGCGGCCGGCCGG CATTA CCGGCCGGCCGCC       TGTATTCTCACCTGG 100 145
        ugpA NONE
        ugpE NONE
CXD79_RS06520 1332929 .. 1332962 + -17.3  -3.44325   GCCGCAGCGGGGACA     GGCGCCCGTGCGCGG CGAG CCGCGCGCATGCGCC      TTACTTGTACGACGT  87 102
CXD79_RS06530 1334971 .. 1334981 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS06535 1336151 .. 1336191 +  -3.1  -3.06261   ACAGAAGATGCCCAC CGCGACGCAGGCGATGCCG ACCAG CGGCGAGGCG-GCG-CGCG TGTTCGCGGTTGCGA  42 191
CXD79_RS06550 NONE
CXD79_RS06555 1337804 .. 1337862 +  -2.9  -4.56597   CCCGCGGCAGCCTGA TCCCCTTGCCGGGCGCAGGGCTAC-CGGC CCG GCCGCGCGGCCC-GTGCGGCACAATGGGA TTTTTGGCGCAAGGC  69 76
CXD79_RS06560 1338744 .. 1338776 +  -9.7  -3.06671   GCAGCCCGGGCGCCA      TGGCGGTGCAGCGCG TCA CGCCCAGCATGGCCA      TGTTGCGGTCGATCT  59 67
CXD79_RS06620 1348485 .. 1348513 + -10.1   -2.9348   GACGCGCAGCACGGC        GGCTAGGGCGCGG CGA CCGCGCCACACCC        TATGTAAAATTTACA  59 20
CXD79_RS06625 NONE
        arsC 1350573 .. 1350604 + -24.5  -3.90112   TGAGGGCGAGTGATT      GCGGCCTGGCGCG GCAAGA CGCGCCAGGCCGC       TTTCGTTGACGGCCG 100 70
CXD79_RS06665 1355814 .. 1355845 +   -10  -2.81547   GGGCCAGCGGCAACA      GGCGCTGCGCGGCC TGGC GGTCGTCCAGCGCA       TAGTTGATCTGCAGG  56 306
CXD79_RS06695 NONE
CXD79_RS06700 1361381 .. 1361424 +  -8.3  -2.51133   CTGCACGTGATGCAG GCGGTCGAGG--CGCAG-TCCA GCG TGGAGCTGCTCACCTCGATCGC GTTCGTGGATGACTC  51 258
CXD79_RS06745 1381324 .. 1381381 +  -7.7  -3.07113   CTGTCGTCCACATAG CGCAG-CGCGG-C-GGGCGCCGCGGGGCT CACG AGCGGCGC-GCGCCCTGGCCCCGGTTGCG TTGGCTGGACTGATC  53 66
CXD79_RS06770 1385715 .. 1385738 +  -8.8  -3.53012   CGGCGAACAGCCGCC          GCAGCTGGCGC CCT GCGCCATC-GC          TTTGCGGCGCCGGGC  61 350
CXD79_RS06795 1388780 .. 1388812 + -12.7  -2.73875   CGCCTGGCGCGGCGC     GGCCGGTCCTGCCC GAACTG GGGCCGGAC-GGCC      TGGTGTTCGCCGAGG  65 244
CXD79_RS06805 1392377 .. 1392409 + -10.5  -3.05963   TGTCGACCGTGCCCA     CGC-GCGCGCCGTC GGGCAG GGCGGCGCGCAGGG      TATTGACCTGCACGT  59 285
CXD79_RS06820 NONE
CXD79_RS06825 1398328 .. 1398343 +  -4.6  -3.41051   GAGATCGGCAATGGC              CTGGTG GAAG CGCCGG               TTCTCGTCGAAGTAG  52 291
CXD79_RS06835 NONE
CXD79_RS06840 NONE
CXD79_RS06845 1402816 .. 1402828 +  -3.3  -2.64243   AGCCCCGCAGGAGCC                GCGTC CAT GAAGC                TGCTGTCGCATATCC  39 16
CXD79_RS06850 NONE
CXD79_RS06855 1405376 .. 1405400 + -13.5  -3.21416   CGGCGGGCCGACGGC          GGTCAGGCTGG CGT CCAGCCCGGCC          TTGCTCATGGCGCTG  72 427
CXD79_RS06875 NONE
CXD79_RS06880 NONE
CXD79_RS06885 1411347 .. 1411383 +  -9.4  -3.02511   GAAGTAGCCCGTCGC   CGG-CGCTGGCTGTCCC TGCG GGGACAGATACCGTCCG    TCTTGGCCGGCTACC  57 34
        flhB 1417642 .. 1417681 +  -3.5  -3.67296   GGTGATGATCCTGCT  GGTGGCGATGTTCACGCG CAAGC CGC-TGGATTTCGCCGCG  TTTCCCTCGGTGCTG  54 199
        flgB NONE
        flgC NONE
        flgD NONE
CXD79_RS06960 NONE
CXD79_RS06965 1427671 .. 1427701 +  -2.2  -4.32034   CGGCCAGCTGATTAT       CAACGCGCGCGCCG AAG CGCCGCGCCAGGAG       TTTTCATCATGATGC  65 30
        flgG NONE
CXD79_RS06975 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 1434674 .. 1434699 +   -14  -3.05384   GTAGTCGGGAAATGG         CGCGCGCTCC CCTCGA GGAGCGCGTG          TTCGATGGAAAGCGG  72 57
CXD79_RS07000 1436565 .. 1436576 +  -2.2  -3.68853   GGGCGAAATGGCGGC                CGGA TAGT TCTG                 TTTGGCGGTTTTTGC  51 49
CXD79_RS07005 1438348 .. 1438383 + -22.6  -4.56597   CCAGGACGGGAAAGC    GGCGATCCGCCGCGGC CAGC GCCGCGCCGGATCGTC     TTTTTACAGGCAGCG 100 92
CXD79_RS07010 1439924 .. 1439939 +  -4.6  -3.78419   CGTCGGGTGCCGTCG              GGTGCC GCTG GGTGCC               TTGTATCTTTCCTCC  58 47
CXD79_RS07015 1441155 .. 1441181 +  -2.9  -3.90744   CAAGACGGTATCTGT        CCCC-GCGGG GACAGGCA CCCGAAGGGG         TTATTTGCCCGCCAG  58 45
        fliE 1454507 .. 1454528 +  -7.2  -2.88544   CCAGCAGCTCGGCCA           CCGCCGTG TAGAGT TGCGGCGG            TATATGGGCATCCAG  50 518
CXD79_RS07140 NONE
CXD79_RS07145 1461203 .. 1461219 +  -3.5  -3.31415   GACAACGGTTTCATC              GCCGCAC AGT GACCGGC              TTCGATTTCGTCGTC  47 14
CXD79_RS07150 NONE
CXD79_RS07155 NONE
        rpsB NONE
CXD79_RS07185 1470586 .. 1470620 + -13.5  -3.83144   ACGCGTCATCGTAGG    GGCCGGCCAGGGCGGG GCTT CCCGAACT-GCCGGCC     TATTTCTTGTCTTAC  83 40
CXD79_RS07190 NONE
CXD79_RS07195 1471961 .. 1472012 + -10.8  -3.10344   ATCATGACCGTATAA TTCCGGTTGAGGTATCGGGGCCGT ATCG ACGGCTCCGGTGTCGATATCGGAA TCTGTTCCGTACGCG  64 26
        uppS NONE
CXD79_RS07205 NONE
CXD79_RS07210 1474950 .. 1474978 + -10.1  -3.59979   TCATTCGCCGGCAAT        CTCGGCCTGGCGT GAC GCGCCGGGCCGCC        TTTCGCGTCCACCCG  67 11
        rseP NONE
        bamA 1478767 .. 1478800 +  -2.9  -3.72893   GTTACGCATGAAAAC     ATGGGAAATGGCCGG TTGC CCGGCCGTCCCGCAG      TTTAGTGGCACAATA  53 65
CXD79_RS07225 1479420 .. 1479430 +  -2.4  -2.64218   CTGGGCCGATAAGCA                 CGCC CAT GCCG                 GTTCTGCTGGACCCT  38 29
        lpxD NONE
        fabZ NONE
CXD79_RS07240 NONE
CXD79_RS07245 NONE
CXD79_RS07250 NONE
CXD79_RS07255 NONE
CXD79_RS07265 1487763 .. 1487783 +   -14  -5.40072   CGGCAGCAGGAAAAA            GCCTCGCC CTTGC GGCGAGGC            TTTTTTTCGCCGGGC 100 46
CXD79_RS07275 1489089 .. 1489108 + -10.6  -3.09015   CGTAACCATGACCTT            GCCCGCCG GCGA CGGCAGGC             TTCACTAGCTGTGAA  64 36
CXD79_RS07285 1491118 .. 1491141 + -17.4  -3.59979   CGTGAGGTTCGACCC          GGGCGCGCCG GCCG CGGCGCGTCC           TTTCGCGTCCGCGCC  89 36
CXD79_RS07290 1492335 .. 1492355 +  -9.7  -3.67622   GCGCTGGTTGACGCG            CGTGTCGTG CTT CAGGACACG            TTCCTTTTCGCGCTG  68 30
CXD79_RS07300 NONE
CXD79_RS07305 NONE
CXD79_RS07310 1494771 .. 1494784 +  -2.4  -2.62616   CTCGCCAACGACTTA               CGTT TACGTT AACG                TCATGTCGAGCGTCC  38 129
CXD79_RS07315 NONE
CXD79_RS07320 NONE
        mmsB 1498153 .. 1498169 +  -4.3  -3.08464   GGCCGGGCGGCCAGG              GCCATTC CGC GAGAGGC              TTGCATGCCTGATAC  47 50
CXD79_RS07330 1498598 .. 1498625 +  -6.8  -2.90075   TGACCGCGGTGCGGG        TGACGCCGCGTT GAAC GGCGCGGCGGCC         TATACTTGGCGCGCC  50 12
CXD79_RS07335 1499539 .. 1499573 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 204
CXD79_RS07360 NONE
CXD79_RS07365 1507086 .. 1507113 + -14.2  -6.15828   GCCTCGAACGTCCGC        CCCATCCACGGCG CCA TGCCG-GGATGGG        TTTTTTTTTGGTGCC 100 47
CXD79_RS07395 1513724 .. 1513734 +  -4.6  -3.07113   ACTCGCGAATAGGGG                 GCTC AGT GGGC                 TTGGATGACCTGGTG  45 156
CXD79_RS07400 1514035 .. 1514045 +  -2.6  -3.57144   CAGCGCTTGCAGATG                 TAAT CCG ATTA                 TTTCCAGGTGGCGCG  48 23
CXD79_RS07405 1515107 .. 1515126 +   -10  -4.07568   CGGCAGTGTCATAAT            CGGGGTTG ACCG TAACCCCG             TTTTCGCGCGAAGCC  78 27
CXD79_RS07410 NONE
CXD79_RS07415 1517077 .. 1517125 +  -8.6  -2.62184   GCCAGGCCGCCAAAT AGGCCGCGCGTTCAGGCCGGGCT GACG GGCGCGGCCAG-GCGCGCGATCG TGGTGTCCAGCGGCC  52 24
        apbC NONE
CXD79_RS07440 NONE
CXD79_RS07445 NONE
CXD79_RS07450 NONE
CXD79_RS07455 1524823 .. 1524840 +  -8.4  -3.29829   TGCTGCATGCGGGCA             CCGCAC CATGGC GTGCGG              TTGTCGGAAGCTATA  58 88
CXD79_RS07460 1525122 .. 1525136 +  -5.6  -3.13403   ACCACCCTCGTTTGA               TACCGG AGC CCGGCA               TGTTGCTGACCAAGA  49 26
CXD79_RS07465 1528602 .. 1528624 +  -3.2  -3.01712   GGCGCTGCTGGCCGG           CGACGGCGAC GTG GTGGCCGACA           TCTTCCGCACCCGCG  42 522
CXD79_RS07475 NONE
CXD79_RS07480 NONE
CXD79_RS07485 1530548 .. 1530598 + -10.2  -3.61398   GCCAGTAGCCCGGGC GGCAAGCCGCGCGGCGTCCGGCC GCCTCA GGCCGGGCGC-GTGCGCCGGACC TTCTTGCGCGCGAAA  67 33
CXD79_RS07500 NONE
CXD79_RS07505 1534204 .. 1534224 + -16.9  -4.07687   AGCACGAAATCCAAA            GGCCACGAG ACA CTCGTGGCC            TTTTGCACGGGGCGT 100 121
        leuC NONE
        leuD 1536473 .. 1536509 + -18.6  -3.37556   TGACGCGTTGCCTGC    CGGCCCGCCGTCCGCG TTGAT CGCGCGCGGCGGGCCC    TTGCCTTGTTTTCCC  93 38
        leuB 1537666 .. 1537682 + -10.1  -4.58685   CCACTGTGCGCAAGG              GCCGCGA TTT TTGCGGC              TTTTTCGCACAATTT  93 73
         asd 1538946 .. 1539002 + -11.8  -4.07568   CCTGACGCGCGGCGC CGGCGCGCATGGCAGGATACAAGGGCGCC CGCG GGCGCCCTTG--T-C-GC-AGGCGCGCCG TTTTCGACGGCAAGG  82 36
CXD79_RS07530 NONE
        truA 1541610 .. 1541622 +  -4.7  -3.61398   TTTACGCAAACGGTC                CGCGC TCA GCGCA                TTCTTCCACACCCAG  52 130
CXD79_RS07540 1542733 .. 1542749 +  -6.5  -3.53012   ATGGCGACGGTGGCG              CGGGG CAAATAA CCCCG              TTTCGACGCGACGCG  56 14
CXD79_RS07545 NONE
CXD79_RS07550 NONE
CXD79_RS07555 NONE
CXD79_RS07560 1546074 .. 1546094 + -15.5   -5.1101   TATCGAAACGGAAAA            CGCCAAGTC GCT GACTTGGCG            TTTTTTGCCTGATCG 100 62
CXD79_RS07565 NONE
        yaaA 1548157 .. 1548194 +  -3.4  -4.21812   CGCAAGCAGGCCTGA  CAGGACG-CGCG-ATGTC GGCA GGCTTACGCGTCTTCCTG   TTCTTTTCGCTCGGC  63 26
CXD79_RS07575 1549878 .. 1549892 +    -7  -3.72576   CGGCGTCGGCGCGCT               CGCCGG TCT CGGGCG               TTTCCTCGCCCGCCG  61 494
CXD79_RS07600 1554072 .. 1554099 +  -7.6  -3.88291   GGATTGAGATCAACT        CGGGTCGGATCG CGTA CAATGCGGCCCG         TTTCTAGGAGTCATC  66 34
CXD79_RS07605 NONE
        plsX 1555392 .. 1555408 +  -4.4  -3.14211   GCCGTCGCGCCCGGC             GCGGCTG GGGA CA-CCGC              TTGATGGAAAAAGCT  47 5
CXD79_RS07615 1556398 .. 1556445 + -11.9  -2.50816   GCTGGCCCGCATGTA GGCGGAAGGGCGCGCTGCGCGCG CCTG TGCGCG-ACCGCGCACG-CCGCC ATTCCTCCATACCGA  61 25
        fabD NONE
        fabG 1558177 .. 1558210 + -12.3  -4.03234   TGCAATAGTGAGAAG     CGCGCGGCGCGGC CCATCCAA GCCCAGCCGCGCG      TTTCTGTGGAAACGC  83 33
CXD79_RS07630 1558638 .. 1558658 +  -4.5  -3.55563   TCGAACACTTCGGGG            CGGCGCCGG GAA TCGGGGCGG            TTTCAGGAATGCCGT  52 72
        fabF 1559994 .. 1560028 +  -6.5  -3.69216   CCAACGGTTCGATGG    CCGTTCGT-CGGGTTTG AGT TGAACCCGGACG-GCGG    TATTTTCGATAACCG  59 9
CXD79_RS07640 NONE
        rpoE NONE
CXD79_RS07650 1561616 .. 1561629 +  -2.3  -3.54408   GACGCCGGAGCAGGA               CGTTG ATGA CACCG                TTGCTTTACATGCGC  48 20
CXD79_RS07655 NONE
CXD79_RS07660 1564241 .. 1564265 + -22.9  -4.65895   GGCTGGTTGCCGCAA          CGAGGGGGCGC ATG GCGCCCCCTCG          TTTTTGGCTCGCCCG 100 62
CXD79_RS07665 NONE
        lepB 1567013 .. 1567026 +  -3.7  -3.17392   ACTTCAGCGATTTGA               GCCGC ATTG GCCGC                TTCCATTGACCGCTA  45 3
CXD79_RS07675 NONE
CXD79_RS07680 NONE
        recO NONE
CXD79_RS07690 1570341 .. 1570367 + -15.9  -3.14344   GATGCCCAGCGCGCC        CAGCGCCGCGCG GGCC CGCGCGGC-CTG         TTCGTCCGCGACATC  80 157
        lptF 1579019 .. 1579044 +  -6.1  -3.01791   GTACTGGGCGATGAC         GCT-GGTGCTGC GCA GCACCACCTGGC         TGTTGGGCAGCACGT  48 280
CXD79_RS07745 1581137 .. 1581150 +  -2.3  -3.14132   GAGGAGCAGAGAAAT               GAGCG AAGT CGCTA                TTGATCGGCGGCAAG  42 124
        mmsA 1582690 .. 1582713 +  -8.2  -3.15544   CTATATTACTTATAA          TTGGCTCC-GT CTA ACAGGGGCCAA          TTCATGAACCTGCAG  56 98
CXD79_RS07755 1583836 .. 1583870 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS07765 1585319 .. 1585336 + -14.1  -4.41895   GAGGCCCAAGCAAAA             GCGCCCC GGAC GGGGCGC              TTTTGCTTGGGCCTT 100 77
CXD79_RS07780 1588828 .. 1588874 + -21.5  -2.62184   CATCATGCTGACCAT GCCGACGCTGGGCG-CGCGCGC CGAT GCGCGCGCCGGCAAGCGCCGGC TGCTCTACACCAGCA 100 294
         acs 1592161 .. 1592191 + -14.7  -4.17089   CGTCAGTCTGTAGCC      AGC-CGGGCCGGTC GCAT GACCGGCCCGTGCC       TTTTCCGGCTTTGCA  95 101
CXD79_RS07795 NONE
CXD79_RS07800 1594147 .. 1594172 +   -14  -3.28712   GGTACGCGGGCATTG         CGCGGCCGCGC GCTGA GCGCGGC-GCG         TTCTCAGCCGCCCGC  75 10
CXD79_RS07825 1599281 .. 1599320 + -14.2  -3.62597   GCCGCAGGGCACGCT  GGCCGAGAAGCTGCGCGCC GGC GGCGC-CGGCATTCCGGCC  TTCTTCACGCGTACC  80 439
CXD79_RS07835 1600360 .. 1600377 + -14.1  -5.75945   TTTTTGTATGTAAGG             CGCCGGC GTTA GCCGGCG              TTTTTTTTCGCCCAT 100 51
CXD79_RS07840 NONE
CXD79_RS07845 NONE
CXD79_RS07850 1604367 .. 1604390 +  -2.3  -4.71426   GCGGCGCGTATTGAA          CGCGGT-GGC TTGGC GCCTGCCGCA          TTTTCTTCCTCAACC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 1607881 .. 1607938 + -13.4  -3.48276   AGACCGCAAGTAGGG CAGGGCGCGCGGCGCATGCAGGCGCCG CGCCGGT CGG-GCC-GCCCGCGCGGCG-GCCCTG TTATCTCCAGGGCCG  75 28
CXD79_RS07870 1609026 .. 1609038 + -10.5  -3.38291   GTGGCGCCAGTGGCT                GGCCG AGA CGGCC                TTCTGACATTCTCCC  65 7
CXD79_RS07880 1611852 .. 1611862 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 194
CXD79_RS07885 NONE
CXD79_RS07890 NONE
CXD79_RS07895 NONE
CXD79_RS07900 NONE
CXD79_RS07905 1617044 .. 1617090 + -14.3  -3.09581   AACCTGCGTTAATGG TCAGTAATCCGGCCAGGCCGCG GCAT CGCGGCCCGGCCGGAA-ACCGC TGTCTTCCGCGTTTG  73 29
        ftsB 1617503 .. 1617518 + -10.4  -5.86332   CCGGACGCGCCAACA              CTCCCC GCCA GGGGAG               TTTTTTTTGCCTTGG 100 50
CXD79_RS07920 1620051 .. 1620071 +  -4.5  -3.04792   TGGCTCAGTCGCTCC            CCGGCGCCG CAA TGACGCCGC            TCTTGCGCCTGATCA  45 11
CXD79_RS07925 NONE
CXD79_RS07930 1621289 .. 1621316 +  -6.2  -3.39784   CGGCCCGGCTCCGCC        CGGCCAGC-CCTG GGC CAGGCGCTGCGCG        TGTTGTTCGGCCTGG  55 294
CXD79_RS08010 NONE
        sdhC NONE
        sdhD NONE
CXD79_RS08025 NONE
CXD79_RS08030 1642377 .. 1642387 +  -6.8  -3.01906   CAAGGAACTGATGGT                 CCGT CGT ACGG                 TCTAGTGTTTATTGG  51 10
CXD79_RS08035 NONE
CXD79_RS08040 1644038 .. 1644051 +  -9.5   -5.4505   CGTCCACTGAAAGAA               CCGCC TTCG GGCGG                TTTTTTCTTGCCGGC 100 54
CXD79_RS08070 NONE
CXD79_RS08075 NONE
CXD79_RS08080 NONE
CXD79_RS08085 NONE
        potA NONE
CXD79_RS08095 NONE
CXD79_RS08100 NONE
CXD79_RS08105 NONE
CXD79_RS08110 1658427 .. 1658445 +  -5.2  -4.36914   ACCGTCGGCGCCATG             TTGCCGGC CGC GTCGGTGA             TTTTCTCGGCCAGCA  69 331
        rmuC 1660341 .. 1660380 +  -5.5  -3.90744   CTGAGGAGCAGGCGC  GGGGGCGGAGAGCCC-CC GGCGG GGCGGGCGGTCCGCCCAA  TTCTTTCGCCGCCAA  63 37
CXD79_RS08125 1662043 .. 1662057 +    -7  -2.96984   GGCCCCGATTCTGGC               CCGCGC CTG GCCCGG               TATCTGCTAAATTTC  51 1
        rpiA 1662882 .. 1662910 +  -5.2  -4.07885   CGGGTCATAACCTTG       CG-GGTCGGGCAG CCCT CTGCGCAACCGCG        TTTTCAGGGGCACTA  64 106
        phoU 1663876 .. 1663931 +  -8.1  -3.05596   GGTTCATATGGCCAG GCGGCCTGCTCGCCCGGCGCCAGCCGC AGCA GCG-CGGGCGCCTCGCCA-TAGGCCGA TTCAATCCGCGCCTG  52 166
        hrpA 1671458 .. 1671498 + -17.6  -3.57263   GCGGTAGGGGGCTGT CCCACGGG-TGCCTGTCCC TGCG GGGACAGGCACCCCGAGAG  TTTGCGGGTGCCAGT  90 34
CXD79_RS08165 NONE
CXD79_RS08170 NONE
CXD79_RS08175 NONE
CXD79_RS08180 NONE
CXD79_RS08185 1680139 .. 1680170 + -13.6  -3.04144   ATAGGGCGCGTCGTA      TTCGCGCCGTGCCG GGGC CGGCGCGGCGGGAC       TGTTCCAGATGAACA  69 250
CXD79_RS08195 1682586 .. 1682603 +    -4  -3.76641   TATGAAGACAGGCGC             CGCCGC GGATAA GCGACG              TTTGCGTATTGCGCT  57 14
CXD79_RS08200 1684139 .. 1684167 +  -2.3  -3.27743   GCCGTTACACCCAGC       CGCGCAGCCAGT AGACGA ACAGGCCG-GCG        TATTCCTTGATGATG  44 438
        msbA 1687880 .. 1687896 +  -6.5  -3.53012   CAACACCTGTTGCGC              CCATTGC GGC GCCATGG              TTTCGGCGGCGGCCA  55 148
CXD79_RS08230 NONE
CXD79_RS08235 1691150 .. 1691163 +  -3.7  -4.74103   TCATGCGCGTGCGGT               CGCGC GAGA GCGCC                TTTTTCAGTTCGGCC  77 418
CXD79_RS08255 NONE
CXD79_RS08260 NONE
CXD79_RS08265 1695899 .. 1695937 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CXD79_RS08270 1699162 .. 1699172 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf 1699347 .. 1699381 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CXD79_RS08280 1702482 .. 1702535 +  -6.6  -3.76224   GCTGGTGACCGCGCG CCGCCGGCGT-C-GCTCAGGGTACGGC GAT GCCG-GCGCTGCGCAGCAGGGCGGCGG TTTCGTAGATGGGCA  62 33
CXD79_RS08320 1709385 .. 1709417 +  -4.6   -4.1899   GTCGCGGCGACGCTG      AGCGGCAGGCGGCA GATTG TGACGGCCGCCGCG      TTTTGCATACACTGG  66 25
CXD79_RS08325 1710883 .. 1710905 +    -9  -3.03441   CCAGGGTGCGGGCAA           AGCGCGCGAC CAT GTCGCGCACC           TGTTCGGCGGTGATG  55 107
CXD79_RS08335 1713646 .. 1713704 + -15.8   -3.6106   TATGTAGTAGCCGCC GCTGTCGGCGCGCACGCGCTCG-CCGC CCATGC GCAGCCGCGCGCCTTCGCGCCGGCCGC TTTCGACATATTCCA  85 396
CXD79_RS08370 1721164 .. 1721193 + -18.5  -3.09492   CCAGGGTCAGCAGTT       CGCGCGCGCGGGC TTCG GCCTGGGCGCGCG        TCTTGCCGTTGGCGA  85 432
CXD79_RS08395 1727880 .. 1727928 +    -8  -3.67296   CTGAACGCCGAGGCC TGGAGCG-GCGCCTGA-CGCCGGC TGG GCCCGCGCTTGGCCGCGCGCGCCG TTTGGATCGATAATG  63 11
CXD79_RS08400 1729090 .. 1729128 +  -8.7  -3.03159   GGCCTGGCGCTCAGT  GCGC-GCCGGCCGC-CGCC TCG GCCGCGCCGCCGCCCGCGC  TCTTGGCGGACTTGG  55 49
CXD79_RS08430 NONE
CXD79_RS08435 1736930 .. 1736949 + -16.4  -4.18018   TTGGCTCATGCAAAA            CGCGCCCC TTGC GGGGCGCG             TTTTCGCTGGCGGAC 100 54
CXD79_RS08450 1740219 .. 1740233 +    -7  -3.01924   GCGGTAATCAGGTGC               GGGCCG GCG CCGCCC               TGTTCGGCCAGCGTC  52 478
CXD79_RS08465 NONE
CXD79_RS08470 NONE
CXD79_RS08475 NONE
CXD79_RS08480 1746153 .. 1746184 +   -10  -4.07568   AGTAATCCCGCATCG      GCGGCGGGCT-CCGC ACG GCGGCGGCCCGCCCA      TTTTCCCGGAAGCAG  78 36
CXD79_RS08490 1747794 .. 1747838 + -15.6  -3.17075   TCGGCGTCGACCAGC GGCGTCCAGGCCAGCTGGCGC GCCT GCGCCAGCAGCTC-GGCCGCC TTGCCTTGCCCGGCG  77 197
CXD79_RS08505 1750978 .. 1750999 + -15.1  -3.01712   GGCCTGTTCTTCCAT           GGCCGTGGC CGCC GCCGCGGCC            TGTTCGACCAGCGCG  74 197
        greA 1753787 .. 1753807 +  -9.6  -3.07104   ATCCGAATTCCTGAA            CGCCGGGC CGTGC GCCGGGCG            TCTGTATCGTTGTCG  57 238
CXD79_RS08525 1755803 .. 1755840 +  -7.5  -3.16742   ACCGCGCCGTCTCCG   CGCGCGCTGAGC-GCCTC CAG GCGGCTGCGCAGGTCGCG   TTCGTGAGCGTTCAG  53 203
CXD79_RS08570 NONE
CXD79_RS08575 NONE
CXD79_RS08580 1763493 .. 1763506 +  -3.1  -3.17444   CGTCAAGATTTCAAT               TCGAG GAGG TTCGA                TATGTCTGTTTCTCC  44 58
CXD79_RS08585 NONE
CXD79_RS08590 NONE
CXD79_RS08595 NONE
CXD79_RS08600 NONE
CXD79_RS08605 NONE
CXD79_RS08610 NONE
CXD79_RS08615 NONE
CXD79_RS08620 NONE
CXD79_RS08625 NONE
CXD79_RS08630 NONE
CXD79_RS08635 NONE
CXD79_RS08640 NONE
CXD79_RS08645 NONE
CXD79_RS08650 NONE
CXD79_RS08655 NONE
CXD79_RS08660 NONE
CXD79_RS08665 NONE
CXD79_RS08670 1777654 .. 1777676 + -14.2  -2.70932   TGGCCCGGGCAGGGG           GGCTACGGCA CGC TGTCGTAGCC           TCGTTCGCGCAGCGC  69 44
CXD79_RS08685 1779857 .. 1779871 +  -5.6  -3.59262   GACCTGCTGCATCGC               CTGCCT GCA AGGCCG               TTTCGCGATCTCGGC  54 514
CXD79_RS08705 1786799 .. 1786815 +  -5.1  -2.78463   GCGCCGGCAGGCAGG              TTCTGCG TCG CGCACAA              TGTGCTGCGCAAGGT  43 398
CXD79_RS08720 1788690 .. 1788740 +  -5.5   -3.7108   GCCGCGCGTGGCGGA TCTGCGCGTCGATGCGCTGCCCG ATCCAGC CGGCCAGCTCA-CGAT-CGTAGA TTTCGGTGTCCAGCT  58 123
CXD79_RS08730 1790302 .. 1790324 +  -4.1   -5.4505   TTCGTTTGAAAACAG          GCACTTAGGC GCAA GCC-GGGTGC           TTTTTTCTTGGGCGG  90 47
CXD79_RS08740 1793452 .. 1793492 +   -11  -3.53012   ACGGGCGCGCGGCCT  GCGCGCAGGCTTTTGCCG GGTAA CGGCCGGGATCTGCGCGC  TTTGGCCCGGGACCC  70 65
CXD79_RS08745 1794109 .. 1794143 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS08775 NONE
        ectA 1802551 .. 1802561 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS08785 1803579 .. 1803601 +  -6.2  -2.78463   AGGGGGCATCCGGCG           CGCCGCCA CGTACAA TGGCGCCG           TATGATGCACACGCT  47 39
CXD79_RS08790 1804169 .. 1804214 + -11.7  -3.04144   CACCCGCGGGCGCGG CGACTG-GGACGTGCAGGCCTG AGC CAGGCCCGCGCGGCCTCAGGCC TGTTCGCCCTCGCCG  65 4
        tsaD 1808597 .. 1808615 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 204
CXD79_RS08825 NONE
CXD79_RS08830 NONE
CXD79_RS08835 NONE
CXD79_RS08840 NONE
CXD79_RS08845 1814501 .. 1814528 + -15.5  -3.75153   GATCCGCAGGAATGA        CGCCCCGGGGC TGCAAC GCCCCGGGACG         TTTGCGTTGGCGCGC  85 49
CXD79_RS08850 1815521 .. 1815574 + -14.8  -3.55444   GCGGACCTTCTGAGG CG-CTG-CCG-G-GGACGTCCCGTCC GGTGGG GGACGGGGCGTCCGCTCGGACAGCCG TTTCCGGCATGGCCC  81 28
        rlmD 1817045 .. 1817076 +   -18  -3.25169   CTGCCTGAGGCGGCC      CGCCGGGCGGCG GCGTTCAG CGCCGCCCGGTG       TTGCTCAGTTCTTCG  89 33
CXD79_RS08865 1817858 .. 1817911 +  -4.3  -3.52877   TTAGCGATCGATTGC TTGAGA-CTATCAATTAATTAGATTT ATT AAATTTTATTAATTGATAGCTAACAA TTATCATCTCTTCAT  52 48
CXD79_RS08870 1818709 .. 1818732 +   -21  -4.32201   CTGGCCTGATGCCTG          GCCGGCGGCG CTGC CGCCGCCGGC           TTTTCCCTTCCTTCG 100 32
CXD79_RS08875 1820396 .. 1820416 +  -8.1  -3.53811   GCCGCTGCCGTGCAG            CCCGAAGCC GTC GGCGGCGGG            TTTGCGCACGGTCAG  60 170
CXD79_RS08890 1824169 .. 1824215 + -20.3  -4.87626   TCGGCCTGGAACATG GCCCGGTTGGTGGCGATTCCTT CCAT GAGGAA-CGGCACCAGCCGGGC TTTTTCCTGTTCGGC 100 116
CXD79_RS08900 1825439 .. 1825449 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS08910 1826432 .. 1826471 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD79_RS08915 1827745 .. 1827786 +  -7.9  -3.89354   GCTGCTTGATCCGCC TCG-GTGGCGGTGCCGACCG TGC CGGTCAGCGTCACCACGCCA TTGTTCGTTTCGACC  67 268
CXD79_RS08950 1836963 .. 1836998 +   -19  -3.14132   CCGGGTGCCCGAGTG    CCCGGGTGCCTGTCCC AGCG GGGACAGGCACCAGGA     TTCCTGCGGGGACAG  90 50
CXD79_RS08960 1839046 .. 1839067 +  -2.1  -2.87132   AACTGCGGGCCTTGT           TGCAGGCGT AACG GCGCGGGCA            TGTCTGCGGGCGGCC  40 15
CXD79_RS08965 1840337 .. 1840365 + -10.1  -2.77994   TAGCGCCGGCCGGGT        TCGGCGCGCCGCC GAG GGCGGCGCGGAAA        TGGTTGCAATTTCTG  57 38
CXD79_RS08970 NONE
CXD79_RS08975 NONE
CXD79_RS08980 1842419 .. 1842434 +  -6.2  -4.83722   GTCTATGGCATCAAG              TTGCAT GGTT ATGCAA               TTTTATTCTGCTGTT  86 490
CXD79_RS08990 1843842 .. 1843857 +  -8.2   -3.4247   TCCAGCGCCGGCGCG              CCGCCG CCTT CGGTGG               TCTTCTTCAGCTTCT  61 343
CXD79_RS09015 1851253 .. 1851263 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS09020 1852674 .. 1852684 +  -2.4  -4.06419   CAGGGTGTCAGCATA                 CAGG TAG CCGG                 TTCTTTGTAGCAAAA  58 432
CXD79_RS09030 NONE
CXD79_RS09035 1856399 .. 1856453 + -15.8  -2.61383   GCTGGACATCATCAC GGCCTGAGCTTCGCGTCTTGCGCCCGC ATCG GCTGGCGCAAGACGCG--GCA-GGGCC ATTCTCAATAGCGGT  74 19
CXD79_RS09070 1865832 .. 1865851 +  -7.1  -3.42354   AAGGTGTATTGGCCG            CTGGCCT TGGCCT GGGCCAG             TTCTGCCTTGACCTG  58 290
CXD79_RS09080 1867774 .. 1867795 + -14.4   -2.6155   CCGGGCCGCGCCGCG           GGGCCGCC TATAAT GGCGGCCC            GTTGGTCTTCCCAGG  69 45
CXD79_RS09085 1868106 .. 1868132 +  -7.9  -5.06816   GGCGCCATCTGACGC        ACTGAGCGCGCC ATCG GGCGCGC-CGGC         TTTTTCTTGGACAAT  88 21
CXD79_RS09090 1868693 .. 1868704 +  -2.2  -4.05004   AGTGCCGTGCCTTCT                C-CGG CGT CCGCG                TTATTGTTCTACTGC  58 246
CXD79_RS09095 1869005 .. 1869020 + -11.8  -4.93547   AGCGCGTCCATAAAA              GCCCCC GCCA GGGGGC               TTTTTCATTGCTTGG 100 48
CXD79_RS09100 1869868 .. 1869878 +  -3.2  -3.77808   GCGAGATCTTCAAGC                 GACG CGG TGTC                 TTGTGTTCTGGTCGC  56 261
CXD79_RS09105 1870245 .. 1870270 + -16.9  -5.06414   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 92
CXD79_RS09115 NONE
CXD79_RS09120 1873066 .. 1873092 + -14.4  -3.01924   TCGATAAGCGTTGAT         CGCGCCGGCC CTCATCC GGCTGGCGCG         TCTTCACCAGAGATA  72 78
        clpX 1874443 .. 1874477 + -19.6  -3.05819   GATCCCGGCCGCCAT     TGCAAGAAAACCCGTT TGT AACGGGTTTTTTTGCA     TCTTCCCGCTATCTG 100 46
CXD79_RS09130 1877098 .. 1877122 + -22.9  -5.45726   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTCGGCTATC 100 59
CXD79_RS09140 1879602 .. 1879618 +  -7.2  -4.21827   TGAGCCCGCGCGCCA              TCGCCG CGATC CGGCGG              TTTTCCCGTGTTTCA  72 38
CXD79_RS09145 1880602 .. 1880622 +  -2.4  -3.16564   GGTGCCGTTGGCCAA            GTCGCTCG GCGTA CGGGCGGA            TTGATGCCATGAAAA  42 1
CXD79_RS09150 1881070 .. 1881083 +  -2.3   -2.6563   GGCGATGGTGGCCGA               GTGGC TGAT GCAAC                TGCGTTATTGAGCGC  38 1
CXD79_RS09155 NONE
CXD79_RS09160 NONE
CXD79_RS09165 NONE
CXD79_RS09170 1884391 .. 1884418 + -11.3   -3.1876   TCAAGGCCGAATTGC       CGC-CGCTGCCGG CCGA CCGGC-GCGCGCG        TTCGTGGATGGGCTT  64 125
CXD79_RS09185 NONE
CXD79_RS09190 NONE
CXD79_RS09195 NONE
CXD79_RS09200 1888824 .. 1888840 + -13.7  -3.65812   GAGCCTTCAGCGCGG              CGTGGCC GGC GGCCACG              TTGTATTGCCCCACC  80 47
CXD79_RS09210 1890690 .. 1890719 +    -2  -3.64703   CGCACGCGCAGCCGC       TGCCGCCCGCCGG CAACC CCGGCGC-TGGGA       TTTACATGCCCCGCA  51 392
        uvrB 1895998 .. 1896012 +  -3.5  -2.70932   GAAAGACGGAAATTA               GCGGA GAAAA TTCGC               TCGTTACAAACAGGC  41 47
CXD79_RS09235 1896791 .. 1896806 + -11.8  -5.00616   CCCAAAATGAGAAAA              CCGCGC GACT GCGCGG               TTTTTTCCGACCGAG 100 96
        iscR NONE
CXD79_RS09245 NONE
        iscU NONE
        iscA NONE
        hscB 1900021 .. 1900041 +  -2.4  -3.32844   GGCGGCCGGCCCGAT            GCGCGGCA ACCGA TGACCCGC            TTGTGCGGTGCCGCG  44 81
        hscA NONE
         fdx NONE
        iscX 1902525 .. 1902559 + -24.4  -3.53012   GCCGGCGCGCCGCCC     GGACAAGGGCCCCGTC ATG GACGGGGCCCTTGTCG     TTTCGGGGCCGCGCG 100 48
CXD79_RS09280 1903686 .. 1903720 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS09295 1906593 .. 1906612 + -12.1  -5.60993   TGCGTTTGGCTTGAG            CCCCGCG AACCCC CGCGGGG             TTTTTTTATGGCCCG 100 66
CXD79_RS09305 1909382 .. 1909405 +  -9.4  -3.15249   CGCTACGTCACCACG          GCCTGCGCGC TGGC GCGCGACGGC           TTGATCGACGGTATC  59 364
CXD79_RS09315 1911031 .. 1911055 +  -7.2   -3.4072   CATTTCGTGCCGGCC          GGCGTCAA CTGCTATTC TTGACGCC          TTCTCCTGCCAGGTC  56 54
CXD79_RS09320 1911927 .. 1911940 +  -2.3  -2.70354   GCGCGTGGGCGACGC               GGTCG AGAT CGAAC                TGGATTTCTAGCCCC  38 1
CXD79_RS09325 1912459 .. 1912486 + -10.5  -2.55253   GGCCTGACGGCCGTT        GCGCGCGCGCCC GGCAA GGGCGC-CGCGG        TCACTTCCGATTCGT  57 34
CXD79_RS09330 1913578 .. 1913620 +  -7.7  -5.59357   CGGCGCGGGAACCCG GGGCGGCATCC--TCACACGC GGC GCGTGCAAATGGATACCGCCC TTTTTTTAATGTCAT 100 49
CXD79_RS09335 NONE
CXD79_RS09340 1916370 .. 1916388 + -17.4  -5.78622   AGGCGACGCAACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGCGTAC 100 47
CXD79_RS09355 NONE
CXD79_RS09360 1919280 .. 1919292 +  -6.2  -3.30124   TTCGCCCGGCTGAAA                GCGG TCAGT CCGC                TTATAACAACTCAAC  53 28
CXD79_RS09365 1920889 .. 1920946 +  -3.1   -4.2679   TATTCTGGGGAATAT CCAAGAACTGAGTCGCCGCGCGGCGCCG CCA TGGCGCCGCGCAGC-ACGTAGGAGATCG TTTTCGTGCAAATTC  63 15
CXD79_RS09370 NONE
CXD79_RS09375 NONE
CXD79_RS09380 NONE
CXD79_RS09385 1925740 .. 1925758 + -17.4    -5.252   GCGCGACGCGCTGCG             GGCCGGCC GCT GGCCGGCC             TTTTTTATGGCCATG 100 42
CXD79_RS09395 NONE
CXD79_RS09400 1929485 .. 1929505 +  -3.2  -2.62616   GACTTCCCGTTCCTA           GCG-GGGCA TTCC TGCCAGCGC            TGGTATCGGCCCTGA  39 25
CXD79_RS09405 1930330 .. 1930346 +  -7.9  -3.63991   CCGCGCAACGGCGCA              CGGCGCT GCA GGCGCTG              TTCTTCGACATGGTG  63 398
CXD79_RS09415 1932794 .. 1932819 +    -6  -4.15044   ATTGGTCAGTTTCTA         CGCCAGCCAA TAAGCC TCGGCAGGCG          TTTCTTCACGCAGGA  66 13
CXD79_RS09420 NONE
CXD79_RS09425 1934264 .. 1934295 +  -8.7  -2.94218   TCCGGGCAAGGAGTA     GGG-CGGCGGCGCTG GCAT CGGC-CTGCCGACCC      TCTATAATCAAAAAT  54 25
        alaS NONE
CXD79_RS09435 1937217 .. 1937244 + -21.4  -3.01791   GCGCCTGCCGGCAAG        CAAACGGCCCGC GCAA GCGGGCCGTTTG         TCTTGGCGCGAGCGT 100 41
CXD79_RS09445 1938527 .. 1938545 + -10.2  -4.55295   CTGCATTTCTTGAAA             GCGCTGCC TAT GCCAGCGC             TTTCTTTGTCCGCAA  89 139
        rimM NONE
        trmD 1940350 .. 1940362 +  -9.1  -4.08216   GGCCAGTCCGCAGCG                CAGCG CCA CGCTG                TTTTCGGCCGACTCG  72 400
CXD79_RS09495 1946781 .. 1946807 +   -15  -3.17075   CGCTTGCCATGGGCA         GGAACCCCCGGC CGC GCCGGGGGGCCC         TTGCGTTCAGACGCC  76 85
CXD79_RS09505 NONE
        rlmN NONE
CXD79_RS09515 NONE
CXD79_RS09520 NONE
CXD79_RS09525 NONE
CXD79_RS09530 NONE
        bamB NONE
         der NONE
CXD79_RS09545 1959122 .. 1959136 +  -9.2  -2.52464   GTAGAGTACTGATTT               CGGCGC ACT GTGCCG               TCACTTAAAACAAAC  54 118
CXD79_RS09550 1959432 .. 1959461 + -17.2  -4.36595   AGCATTACCCTTGAT       TGCCCGCC-GCGC GGCCA GCGCCGGCGGGCA       TTTTCGCTTTGGCTC 100 53
        hflX NONE
        hflK NONE
        hflC 1962883 .. 1962912 + -19.3  -4.98531   AAAACATTCCGCATA       CGGCTGAGCGGGC TTAC GCCCTCTCAGCCG        TTTTTCGTTTGGGCA 100 122
CXD79_RS09570 1964178 .. 1964188 +  -6.8  -2.55896   GATTTCCGGATTTCC                 CGAG AAA CTCG                 ATATTGATTCGTAAA  47 76
CXD79_RS09575 1965504 .. 1965537 + -18.1   -3.9461   TCAAGGGGTAGGGCG     CCGCGGGCCGCGCCCC GTT GTGGCGCGGCCT-CGG     TTATTATTCGCCAGG 100 30
CXD79_RS09580 1966322 .. 1966332 +  -3.2  -3.23452   CTGTGCTACTGATGC                 GGCA AGT TGTC                 TTAGCTTGTCGCCAT  46 195
CXD79_RS09585 1966647 .. 1966676 +  -6.5  -3.16055   GCCTGTATTGATGCC       TGATTCCCGAATC TATT GATTCCAGAATCA        TTCATCCAGGATTTG  51 30
CXD79_RS09590 1968927 .. 1968952 +  -6.1  -4.24002   TGGCGGGTGGCGGCA         TG-CATGTGCCG GGC CGGCGCATGGCC         TTTTGCGGTTTGCGG  70 260
        rpoD NONE
CXD79_RS09605 1971759 .. 1971784 + -16.9  -5.14626   TACCAAGTAAACATG         CGGGTCTCGGA GCAA TCCGAGGCCCG          TTTTGTTTTGGTGGT 100 36
CXD79_RS09615 1973536 .. 1973552 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD79_RS09635 1976290 .. 1976331 +  -6.3  -3.02511   CATGCAGTGGGTGCG CCAGCA-GTCGCCGGCCGGC TGA GCCGGCGCGCGCCGTTCAGG TCTTGAGGCGGTAGC  49 4
CXD79_RS09705 1987218 .. 1987230 +  -3.3  -2.52516   TGCCGCACCGCCTCC                AGCAG CGC CTGCA                ATTCGTCCTCGGCAA  39 62
        bioF NONE
CXD79_RS09720 NONE
        bioD NONE
CXD79_RS09730 1992600 .. 1992610 +  -8.2  -3.53444   GGTCACCGCGCCCGT                 GGCC ATG GGCC                 TTTCCGAAACCCTGG  62 446
CXD79_RS09745 1994081 .. 1994120 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD79_RS09760 1998768 .. 1998782 +  -5.6  -3.78934   CTGGTGAGCTACAGC               GCCAAG GCC CTGGGC               TTCTTCTAACCCGGG  60 2
CXD79_RS09775 2002028 .. 2002038 +  -8.2  -3.33162   TGGTCAACGTGGCGT                 CGGC ATT GCCG                 TTCTCGAATACGCTG  59 280
CXD79_RS09785 2004020 .. 2004036 +  -9.3  -2.75481   TGCTCCTGGGTGGCA              GGGGCCC CGC GGCCCCC              TGGTTGGAATTGGCA  55 392
CXD79_RS09795 2005359 .. 2005385 + -13.6   -3.7795   TGGATTCGCCGCGCT         TGGCCGCGAGCG CCG CGCCGGCGGCCA         TTTGCTGGGCTTTGG  82 280
CXD79_RS09805 2006371 .. 2006398 + -17.8  -3.02144   TCGCGCAGCGTGGTT        TCGCGGTAGGCGC GCA GCGCC-ACCGCGA        TGTTGGCGACGGTAA  82 361
CXD79_RS09815 NONE
CXD79_RS09820 2008097 .. 2008110 +  -4.5  -3.02144   CGCCGCGGCGCTGCA               GGTCG GTGA TGACC                TCTTCGAGCGCCTGC  46 208
CXD79_RS09840 2012465 .. 2012475 +  -3.2  -2.78816   GTAGCTGGGCGGGTC                 GTAC ACC GTGC                 TGTCGTAGGGGCTGG  40 329
CXD79_RS09870 2017444 .. 2017459 +  -3.2  -2.52516   CAGCGGATATTGATC              GCCG CCATCGCC CGGC               CTTGCTGGTCGACGC  39 120
CXD79_RS09890 NONE
CXD79_RS09895 2021363 .. 2021391 + -10.2  -3.52073   TTTCGGCCACCATCA        GCCGGTGCGCCT CGTGC AGGCGCAGCTGC        TTCTGGTATTGCAGC  65 177
CXD79_RS09925 2027500 .. 2027524 +  -2.7  -4.07568   CCGTACCAGCGGGCA          CGGCATTGCGG CGG CTGCAACACTG          TTTTGCGCCGGCGCC  59 49
CXD79_RS09930 2028775 .. 2028821 +  -9.6  -3.68222   GGTCGCCGCCGGCCA GTTGC-CG-G-GCCAGGTCGCGCG CCA CGT-CGACCTGGCGCGCGTGCGAC TTGTTCGAATTGGCG  68 224
CXD79_RS09945 2031673 .. 2031714 + -14.3  -3.19513   GGGACAGGCAAGCAA TTGGCGGGTGCCAGTCCCC CTGT GGGGACAGGCACCCGGGGG  TTAGGTTGCCGTTCT  73 126
CXD79_RS09955 2033573 .. 2033583 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS09970 2035996 .. 2036024 +  -8.1  -4.10552   GCCGGCGTGCCGTTG        TCCGGCTTGGC CGCCTGT GCCATGTCGGA        TTTGCTTTAGTGGAA  69 395
CXD79_RS09980 NONE
CXD79_RS09985 NONE
CXD79_RS09990 NONE
CXD79_RS09995 2039657 .. 2039667 +  -2.4  -2.94416   ACCCATCGCGCTCGT                 CGAC CTT GGCG                 TCTGTCATGAACATC  41 40
CXD79_RS10000 NONE
CXD79_RS10005 NONE
CXD79_RS10010 2041992 .. 2042019 + -10.6   -4.2535   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT  89 104
CXD79_RS10045 2047292 .. 2047326 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS10080 NONE
CXD79_RS10085 2056622 .. 2056671 +  -5.6  -3.29144   GTTCGATCACAATAC TCG-GCGCGGCTTGACACCGGGCCG CGC CGGCCCGCGG--GGGCCGCGCACAA TTATCAACACCATCC  51 12
CXD79_RS10090 NONE
CXD79_RS10095 2058976 .. 2058992 +  -3.6  -3.14344   GCGCCGGCCACGCGC              TCGGGC GCCAG GCCCCA              TTCGTGCAGCACCTC  45 102
CXD79_RS10130 NONE
CXD79_RS10135 2066271 .. 2066283 +  -3.3  -3.65046   GGCCGCGCTGATCGC                CATCG CCC CGCTG                TTCTTCCCCTCCGGC  53 82
CXD79_RS10145 2068287 .. 2068341 + -12.1  -3.01712   AAAGCCGGGCCGCCG GCCA-GCAT-GGCCGCCGCCGTGGTGG CGC CCATCAAGGCCGCGGCCGACACGTGGC TGTTGCCCGCCAGCC  66 277
        queF 2071462 .. 2071488 +  -7.9  -2.52464   CAATAGCCGCGTTCA         GCGCGGTGCGG CGCGC CTGCATCGCGA         TCCATTGCGCCAGCA  49 35
CXD79_RS10225 2087576 .. 2087615 + -11.3  -3.28712   GCTGACCGCCTGGCG  CTGCCCGCCCGACAGCA GGCCGA TGCGGTCGGCCAGGCGG   TTCTCCAGCCCCAGG  66 387
CXD79_RS10315 2106633 .. 2106652 +  -3.4  -2.82595   ACAGGTCCTGAGGTG            GCTTACGG CTTG CCGCACGC             GTTTCGGTGGTTCAA  41 175
CXD79_RS10320 NONE
        rpmG 2107362 .. 2107383 + -18.7  -4.86731   GCGCGCCATGGTGAA           CGGCCCCGC CAGG GCGGGGCCG            TTTTATTTGGCAAGG 100 68
CXD79_RS10350 2112229 .. 2112259 + -22.6  -3.85698   CGTCTCAGGTCAAAC       CGCAGAGCCCGCCG CAC CGGCGGGCTCTTCG       TTTATGCGGCGGCGA 100 49
CXD79_RS10355 NONE
CXD79_RS10360 2114059 .. 2114099 +  -2.4  -5.00884   TCCTATAATCGATGG T-TTTGACCGCCCGCGCCC TGCC GGGCGCGGTCCGTTACCTA  TTTTTTCGCACGAGT  79 45
CXD79_RS10365 NONE
CXD79_RS10370 NONE
CXD79_RS10375 NONE
CXD79_RS10380 NONE
CXD79_RS10385 2120359 .. 2120369 +  -2.4  -3.01712   TATCGGCGCCCGCCG                 CCAG GCA CAGG                 TCTTCCCGGAAACGC  41 104
CXD79_RS10395 NONE
CXD79_RS10400 NONE
CXD79_RS10405 2123933 .. 2123957 + -13.6  -4.09685   CCCCCAAAAACAAAA         CCCCGCGAGCC GTGA GGCT-GCGGGG          TTTTGAGCAATAAAA  85 355
CXD79_RS10440 2131720 .. 2131738 +  -8.1  -3.20348   ACCTTCGCCATCTGG             GTGCTGC TGTTC GCAGCGC             TTGCCTATTACTCGC  54 285
CXD79_RS10455 NONE
CXD79_RS10460 NONE
CXD79_RS10465 2136969 .. 2136983 +   -10  -3.33696   GGCGTAGCCGCTGGT               TTCGCC GCT GGCGAA               TTGCTTGGAAAAGCC  63 336
CXD79_RS10490 2140291 .. 2140311 +  -4.7  -3.62046   AGCTCGCCGGCCTCG           CC-GGCCA GCGCCA TGGCCAGG            TTCTTGGGCGAATGG  54 285
        acnB 2143861 .. 2143880 + -16.4  -4.91852   TTCGGCCATGACAAA            GGCCCGCC GCAA GGCGGGCC             TTTCTTTTTGCTGCG 100 48
CXD79_RS10510 NONE
CXD79_RS10515 2145140 .. 2145150 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD79_RS10520 2146276 .. 2146288 +  -4.8  -4.07568   GGTCAGGCTGCCAGC                CTGG TAGTC CCAG                TTTTCAGGCGCCCCC  63 147
CXD79_RS10540 2150294 .. 2150314 +  -3.8  -4.09864   GAGCACGTCGGCCCG            GCGCCCGC CTCGC GCGGGAAC            TTTTGACGCATCGAT  61 108
        acnA 2153188 .. 2153211 + -19.6  -5.26875   CCTGCGCGACCCGAA          CCCTCCGGCC TGCT GGCCGGAGGG           TTTTTTCGTTGGACG 100 59
CXD79_RS10555 2155417 .. 2155437 +    -4  -3.79687   GTTCCACTGACCGGA           TC-GCGCCGC CAT GCG-CGCCGA           TATTTTCTGCCGCGT  57 31
        earP 2156574 .. 2156590 +  -2.2  -2.64274   TGCTTTGCCCGGATC              GGCC GGTGCTCAA GGCC              TCACTTTGACAGCCT  38 60
         efp 2157270 .. 2157289 + -16.4  -5.75342   CAGGCGCAACCGAAA            CGGGCCGC ATGC GCGGCCCG             TTTTTTTTGCCCCGG 100 56
CXD79_RS10670 2177439 .. 2177451 +  -5.5   -3.2614   TCTTGAAAAAAGCTG                GCACG GTT TGTGC                TTGGTATGGGGCATC  51 256
CXD79_RS10690 2180631 .. 2180684 +  -8.8  -2.82623   ACTTCGTCAACGATT GACGGTTGGCA--CGGTGCCTGTCCC CACG GGGACAGGCACCGCATCCCCGCCTAC TCGTTCTCCGCCCCG  54 24
CXD79_RS10730 2191909 .. 2191951 + -10.5  -3.40403   TAGTAGCGCGACAGC GCGCGTGA-GCACGCCGCGC GCAT GGGCGGCCTGCATCACCTGC TTGTCGTCCAGCCCC  65 171
CXD79_RS10740 2194679 .. 2194722 +   -34  -3.06815   TTGTTTGGATCGTTC GACGCGGGATGGGGGCGCCC CCAT GGGCGCCACCATCCCGCGTC TGTATTGAGGAGGAT 100 41
CXD79_RS10745 2196234 .. 2196257 +   -21  -5.47399   CCCGCGGGCAAGCAA          GGCCGGCGCC TTCG GGCGCCGGCC           TTTTTTTCGCCTTGC 100 47
CXD79_RS10750 2197323 .. 2197353 +  -5.4  -2.71712   CCCTAGGGCACGACC      TCGGCCAGCACCT CGTCGC AGG-GCCGGCTGA       CTTTCAGGGCGAGCA  45 107
        pgaA NONE
        pgaB NONE
        pgaC NONE
CXD79_RS10820 2213691 .. 2213705 +  -5.6   -4.1891   CGCCACCAGGTCGGC               CTGCCC GCT GGACAG               TTTCTGTTCGGCCAG  66 180
CXD79_RS10835 NONE
CXD79_RS10840 NONE
CXD79_RS10845 2216488 .. 2216498 +  -2.4  -2.54523   GAAAACCCACCTCCA                 GGGG TAA CCCA                 TGCATTCCAGTCTGC  38 19
CXD79_RS10850 NONE
CXD79_RS10855 NONE
CXD79_RS10860 NONE
CXD79_RS10865 NONE
CXD79_RS10870 2222100 .. 2222127 + -18.6  -3.11687   GACAGGCGCAAAAAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTCGGTACTGCTTGC  90 189
CXD79_RS10905 2229058 .. 2229073 +  -3.2  -4.07568   TTCCACCGGGGTATC              GGGC CGCAACTC GCCC               TTTTCGACCGCGCGG  60 198
CXD79_RS10960 2238159 .. 2238180 + -14.5  -4.93696   GCCGCAAAAGAAAAA           GGCCCTTGA TTGC TCAAGGGCC            TTTTTGATCTTTGGC 100 209
CXD79_RS11000 NONE
CXD79_RS11005 2246547 .. 2246557 +  -2.4  -3.06796   CGTGATCATCGAAAA                 GGCC GAA GTCC                 TTGAATAAGCTGGCG  41 7
CXD79_RS11010 2247513 .. 2247538 + -19.1  -4.55798   CCGCGCCGGGAAAAA         GAGCCTGTCCC CGTC GGGACAGGCTC          TTTTCATTTGGCGTA 100 204
CXD79_RS11030 2251871 .. 2251900 + -22.3  -2.62616   CCACTCCGGCGGCCA       GTGTGCCTGTCCC CGCC GGGACAGGCACAC        TGCTGTACGCCATCG 100 87
CXD79_RS11040 2254108 .. 2254124 +  -5.7  -3.09803   CGCGCACATTGACCA              CCGTGCC GTT GTCGCGG              TATTCGCTGGCCTTG  48 194
CXD79_RS11055 2257136 .. 2257168 +  -8.5  -3.61715   ATCGCCCCGGCCTCG    CCGCCCGCCA-G-GCC GAAC GGCGCATGGCGG-CGG     TTGTTCGACAGGATG  63 184
CXD79_RS11075 NONE
CXD79_RS11080 NONE
CXD79_RS11085 2264658 .. 2264669 +  -7.2  -3.27923   GCGCTGGTGGCCAGC                GGCC TGGT GGCC                 TTGCTGCTGTTCACC  54 111
CXD79_RS11095 NONE
CXD79_RS11100 2267917 .. 2267936 +  -2.7  -3.58343   CACCAACGTCATCGG            CTGCGCC ATCTTC GCCGCGG             TTTCCGGCTCGTCGG  49 332
CXD79_RS11140 NONE
CXD79_RS11145 2291914 .. 2291931 +  -3.4  -3.73775   CGGCCCGGTGCAGCC             GCC-GCA GGCTA TGCAGGC             TTTGCTGGCCATAGG  55 419
CXD79_RS11195 2298961 .. 2298973 +  -3.3  -3.13371   CGCTATTTTTATTCG                CCGGG CGC TTCGG                TATATTAGTGGCCTG  44 76
CXD79_RS11200 2299854 .. 2299869 +  -7.5  -3.39895   CCTGGGCCCGCTTGC              GCCGG CGGTTT CCGGC               TTCGTTCCTCCCGAC  59 133
CXD79_RS11205 NONE
CXD79_RS11210 NONE
CXD79_RS11215 NONE
CXD79_RS11220 NONE
CXD79_RS11225 NONE
CXD79_RS11230 2306550 .. 2306570 + -10.4  -2.70932   CTCGACGCCATGGTG           GCGC-GCGC CAAC GCGCCGCGC            TGATTCACCCCGCCC  57 2
CXD79_RS11295 2319443 .. 2319453 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS11300 2320896 .. 2320924 +  -2.9  -3.59738   GCCTTGGCGCGCATG        GCGTCCTTGACCG AGT CGGACAGGCGGGC        TTTGAGCGTATCGTG  50 464
CXD79_RS11310 NONE
CXD79_RS11315 2322793 .. 2322830 + -11.4  -2.67021   GTAGGTCCGGCCGCG  CCGG-CGGCGGCC--AACC TTA GGTTATGGCCGCTGTCCGG  ATTGCTATTTGGCGC  61 37
CXD79_RS11320 2324412 .. 2324422 +  -8.2  -3.06796   GCATCCAGCAGTTCG                 CGGC GCT GCCG                 TTCGATCAGCTCGGG  55 248
CXD79_RS11360 2334840 .. 2334850 +  -8.2  -3.21747   GCGTCGCGACGCGCC                 CGCG CAG CGCG                 TTACTCCTCCCATCC  58 106
CXD79_RS11365 NONE
CXD79_RS11370 2337421 .. 2337435 +  -2.7  -3.75169   AGAATCCCTGCCCCG               CGTGG CCGGT CCCCG               TTTCATGGAGTCGTC  53 39
CXD79_RS11375 2338289 .. 2338323 + -14.9  -3.63515   GCTCGTCGATGACGA     GGTGGGCCATGCCGC GTTCG GTGGCCAGGCCCACC     TTCTTGCCGATGGGC  83 64
CXD79_RS11450 2352088 .. 2352109 +  -3.6  -3.53012   GGCAGCACCGCGTTG           GCCGCGAT GCCCTG GTCGCGGG            TTTCGGCGGCCAGGG  49 205
CXD79_RS11470 NONE
CXD79_RS11475 2357045 .. 2357063 +  -6.7  -3.21416   GAAGACGCCGCCCGA            CG-CCGCA ACGC TGCGGTCG             TTGATCGTCGCCATG  52 168
        arsH 2358293 .. 2358303 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 255
CXD79_RS11495 2359735 .. 2359769 + -17.1  -2.66316   GGGCGTCGCTCACGG    CGCCTCCTGGCCGCCG TCCT TGGCGGCC-GGCGGCG     TCATGTCGTAGGACG  80 453
CXD79_RS11515 2363157 .. 2363174 +  -4.8  -3.16742   CCCATGCGGTTTCCC             GG-CGCC TGAGC GGCGGCC             TTACTCCGGCTTGAG  47 17
CXD79_RS11535 2366881 .. 2366892 +  -5.8  -2.62184   CGCAGATCGGCACCT                TGCG CACG CGCA                 TCGTCTGAGCGGGCA  44 6
CXD79_RS11540 NONE
CXD79_RS11545 2368931 .. 2368941 +  -6.8  -2.94912   GCGCCGCGCATCCAG                 GCAG AAC CTGC                 TCTATAACTTCAAGG  51 59
CXD79_RS11550 NONE
CXD79_RS11555 2371194 .. 2371205 +  -7.2  -3.14132   TAGAGCGAGCGCCGG                CCCG TGCG CGGG                 TTGGTGCGCACCAGG  53 253
CXD79_RS11565 2372764 .. 2372782 + -10.4  -3.68073   TGCTGGCGATTGAAA             TATACGTC AAT GACGTATA             TTCTTCCATGAACTG  70 109
CXD79_RS11575 2373314 .. 2373339 + -13.3  -2.79831   AGCTGCGATTCAGAA         CCGCCAGCG CAGCACCA CGCTGGCGG          TGTGCTGGCGGTTGC  67 45
CXD79_RS11585 NONE
CXD79_RS11590 NONE
CXD79_RS11600 2381463 .. 2381511 +  -7.3  -2.84192   ACAGTCCGGCCAGCG GCC--GCGCTTCGG-CGCGCGGCG GCGC CGCCGCGCGCCCGGCCCGCAAGGG TGTACTGCTCATGTC  50 439
CXD79_RS11655 2393108 .. 2393121 +  -9.5   -2.5092   CTTCCAGGCCGCGCC               GCGCG GCCG CGCGC                ATTCATAAAATATTC  54 61
CXD79_RS11660 NONE
CXD79_RS11665 2395139 .. 2395164 +  -9.7  -3.24232   GGCCGATCCGCCCGC         CGC-CCTGCCTA GAA TCGGCAGGAGCG         TGTCTTTCAAGGGAG  61 120
CXD79_RS11670 2396006 .. 2396016 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS11675 2397036 .. 2397047 +  -5.8  -3.01712   GCGGCGTCGGCTCGG                TCGC CGGC GCGA                 TCTTCGGCGCGAGCC  47 41
CXD79_RS11685 NONE
CXD79_RS11690 2398909 .. 2398919 +  -3.2  -4.09685   TCGCGGCACTCGCGT                 CATC GGA GGTG                 TTTTGGCCCGTACGA  59 252
CXD79_RS11695 2399827 .. 2399848 +  -8.7  -3.30771   CATATCGTCGGCCAC           CGCC-TCGGC CTG GTCGATGGCG           TTCTGCACGCTCTCG  58 328
CXD79_RS11705 2402120 .. 2402138 + -12.4  -3.57144   TCCAGCACCGCCGCG             GCGTCGGC CGC GTCGACGC             TTTCCCAATGCAGCG  74 344
CXD79_RS11775 NONE
CXD79_RS11780 2421442 .. 2421477 +    -9  -4.70266   AAGCCCGTCCAGCAC   GACGGCGCCCGCGCGG CGGGCA CGGCGCGGG-GCC-TC    TTTTTCCCTGCTGTT  86 94
CXD79_RS11785 2423777 .. 2423798 + -15.9  -4.77165   CCCGGCAAGAAAAAA           GCCGGCATC TCTC GATGCCGGC            TTTTCTTCTGCGCGC 100 306
CXD79_RS11805 2427223 .. 2427241 + -10.2  -2.62184   GTCACCCCGATCCCG             GCCGCCAC CAT GTGGCGGA             TGGTCTCCAGCGAGG  55 278
CXD79_RS11840 2436181 .. 2436239 + -12.3  -4.06419   CGACGCATGAACGGC GCCGGCGCGCGGCCAAAGAAAAACCGCC CGAA GGCGGCTTTTCC-TGGCGGCGCACGGCC TTATTTGTCCACGAA  83 31
CXD79_RS11850 2438469 .. 2438496 + -15.6  -4.59773   ACTGCCTTGTTTGTC        GGCAAAGCGGCC ATCC GGCCGCTTTGCA         TTTTTCCCCGTAGCA 100 107
CXD79_RS11855 NONE
CXD79_RS11860 2441015 .. 2441025 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS11865 2442337 .. 2442348 +  -2.2  -3.21099   CCCCTCGACCAGGTA                G-GCG GCG CGCTC                TTCGTGCTCGGGCGG  43 333
CXD79_RS11880 2445103 .. 2445156 + -19.6  -3.01712   GGGGCCGGCGCCGTC CCGGCCG-CGGCAGCCGCGGCAG-CCG GTT CGGCCTGCCG-GGCCGCCGCCTGCTGG TGTTCGACCGCCCGG  87 294
CXD79_RS11915 2454001 .. 2454029 + -11.6  -2.65298   TCCAGCGAGGCCGCC        GCCGCCGCGGTC TGCTC GGCCATGGCGGC        ATTCTCCTGCGTGGC  61 105
CXD79_RS11930 2458165 .. 2458200 + -20.4  -2.84602   GGCACCCCGGATTCA    GCGCGTGCCAGTCCCC GTGC GGGGACAGGCACGCGG     GTTTACTGCAGTGCC 100 154
CXD79_RS11940 2460211 .. 2460226 +  -6.2  -3.07355   CATAGACCGGTGCCC              CTGAAA TCCT TTTCAG               TCGTTGTTGTTTCAA  49 230
CXD79_RS11945 NONE
CXD79_RS11950 NONE
CXD79_RS11955 2461074 .. 2461086 +  -9.1  -3.28712   GGGCAATTTGAGCTC                GCCGT GCA ACGGC                TTGTCGGACACGCAC  59 243
CXD79_RS11965 2463725 .. 2463746 +  -7.9  -3.61398   CTCCTCGATGGGCAC           GGCC-GGCGC GCC GCGCCCGGCA           TTGTTGAACAGCACA  60 501
CXD79_RS11975 NONE
CXD79_RS11980 2465909 .. 2465919 +  -8.2  -4.09685   CGCGAGGGCTTGCTG                 GCCC CGG GGGC                 TTTTCCGCCCTCGGG  72 45
CXD79_RS11985 NONE
CXD79_RS11990 NONE
CXD79_RS11995 2469489 .. 2469515 + -13.6  -3.14132   CTTGGGCTTGATGGC         CAGCGCGCGGGC GAT GGCCACGCGCTG         TTGCTGGCCACCCGA  72 308
CXD79_RS12025 NONE
        bamC 2475534 .. 2475557 + -18.2  -5.78622   AGCGGCGCAAAAAAA          CCGGCAAGCC GCAA GGCTTGCCGG           TTTTTTTTGGCCTGG 100 66
CXD79_RS12050 2481114 .. 2481142 + -20.3  -3.61398   ACGACTGATGCCGGC        CTGCGCGGCGCGC GGC GCGCGTTGCGCAG        TTGTTGCACACGCAG 100 33
CXD79_RS12060 NONE
CXD79_RS12065 NONE
CXD79_RS12070 2485895 .. 2485909 +  -4.2  -3.14931   CGTTTGGAGTGTTTG               GCCATG CTG CATGGA               TTGATACCGAATCGC  45 52
CXD79_RS12075 NONE
CXD79_RS12080 NONE
CXD79_RS12085 NONE
CXD79_RS12090 2489584 .. 2489609 +  -8.2  -3.40403   CGTCCAGGCCGCGCA         GGC-GCCGCAG CGCAT CGGCGGCCGCC         TTGTCGTCCAGCGGC  61 483
CXD79_RS12100 2490685 .. 2490716 + -14.6  -3.02829   CTGCGCCCCAGGCGC      GCGAATGGCTGTAT GCCC ATACAGCCATTCGA       TCTTACCCGCCTCTG  74 50
CXD79_RS12105 NONE
CXD79_RS12110 2492363 .. 2492397 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 264
CXD79_RS12155 2505024 .. 2505056 +   -20  -2.64616   AGGCGCCTGCCCGTG     CGG-GTGCCTGTCCC CGCT GGGACAGGCACACCG      TCGTCTCCGTCCCCG  95 77
CXD79_RS12160 2506626 .. 2506660 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 201
CXD79_RS12195 2512891 .. 2512932 +  -2.1  -4.01411   AAGGCACAGTAAGCG TGCGGA-CGCGGCGATGCCG CGC CCGCATATCCACGATCCGGA TTTGAGTTTTTCGTA  56 29
CXD79_RS12200 2514342 .. 2514364 +  -9.8  -3.28712   TGGTGGCGTCGAGTT           CGAGCACGGT TTC GCCGTGCTGG           TTGTCCACCACCCAG  63 207
CXD79_RS12285 2528029 .. 2528059 + -19.6  -3.14344   TTTTCCATGCGGGCG       GGCGGCGCCGGGCG CCG CGCCGGTCGCCGCC       TTACTGCACCACCTG 100 79
CXD79_RS12300 2531220 .. 2531263 +  -9.4   -3.0127   TGAAACCGGGGACGC GCGCCTCACCCAGGCAGGGG AGCG CCGCTGCCTCGCTCAGGCGA TCTGTAATTCCCTCG  57 38
CXD79_RS12305 2532618 .. 2532666 +  -3.5  -3.39449   ACCAGCTGAGGCGCA CGACGCACGGCGCGCGCGCGGC CTTGCC GCGGCGCGCGCGAAG-GAGCCC TTCATGTTGCTCGGA  49 32
CXD79_RS12310 NONE
CXD79_RS12315 NONE
CXD79_RS12320 2534792 .. 2534812 +  -3.3  -3.35046   CGGACCGCCGGGCAA            CGGGTAT ATTGGGA ATATCCG            TCTTTCCGAGACTGC  46 59
CXD79_RS12325 2535622 .. 2535656 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 411
CXD79_RS12370 2542773 .. 2542790 +  -8.3  -4.13767   ATGCAACGAAAAAAA             CGGCGCC GCAA GGCACCG              TTTTGCCGTGCCACC  72 151
CXD79_RS12405 NONE
CXD79_RS12410 2550950 .. 2550960 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 383
CXD79_RS12420 2552044 .. 2552078 + -12.9  -2.61582   GGACACGATTGCGCC    CGTCGGCCTTGGCCTT GTAC AAGGCCAGGTCCG-CG     CTTCTGAATGCCCTG  62 105
CXD79_RS12465 2561361 .. 2561380 + -13.6   -5.5112   CGCCAGACATTGCAA            GCCCCTGA TCCG TCAGGGGC             TTTTTTCTTGGTCCC 100 36
CXD79_RS12470 NONE
CXD79_RS12475 NONE
CXD79_RS12480 NONE
CXD79_RS12485 NONE
CXD79_RS12490 NONE
CXD79_RS12495 2568742 .. 2568760 + -13.8  -2.61264   TCATCATGGAAGGCC             GCTGCCCG CTC CGGGCGGC             CTTGTCCATGGAGCC  69 111
CXD79_RS12500 2569997 .. 2570014 +  -7.7  -4.18197   GCCAAGGTCCAGGCA             CGCTGAA CATC TTCGGCG              TTTTCCATACGCACT  74 20
CXD79_RS12505 2572399 .. 2572424 +  -4.7  -5.29846   AAATACCCAGGAAAC         CCCTGTAGA ACCGAGCG TCTGCGGGG          TTTTTCTTTCGGGTT  93 107
CXD79_RS12510 2573331 .. 2573342 +  -3.6  -3.12668   CAGGCGCCGACGCCG                GCGT AAAT GCGC                 TTGGGTCTCCAGATG  45 85
CXD79_RS12520 2574584 .. 2574621 +  -9.8  -3.05384   CTGGCGCATAACGGC   CCGCGGGCCGGTCAGCC TTCCT GGCTGA-TGACCGGCGG   TTCGATCCAGAAAAA  60 30
CXD79_RS12530 2575493 .. 2575530 + -10.5  -2.59742   AAATTTGCCGCAACG   CAGCAAACGCCGGC-GTC CCG GACTGCGGGCGGTTGCGG   ATTGTCGCCATTGCG  57 153
CXD79_RS12535 2575983 .. 2576002 + -10.6  -5.40072   GCAAATCAATGAAAA            AGCCGCCC GGAT GGGCGGCC             TTTTTTTGCGGCACG 100 53
        trxB NONE
CXD79_RS12570 NONE
CXD79_RS12575 2584561 .. 2584571 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 77
CXD79_RS12580 2585554 .. 2585593 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD79_RS12585 NONE
        kdpF 2589750 .. 2589762 +  -4.8  -3.81287   AAATTCTGATGAACG                CCGA TTTCC TCGG                TTTGCTGCTGCTGTA  58 32
        kdpB NONE
        kdpC 2594315 .. 2594335 +  -6.7   -2.8655   CCTGGCGCTGGACCG            CCTGCGCTG AAG CGGCGCGCG            TATAGTATGCGTGCC  50 16
        kdpE 2598019 .. 2598053 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 203
CXD79_RS12650 2603514 .. 2603542 +  -5.8  -3.33261   TCTTGCGCACGTTGG        CCGTGGCCGCGC TGCCC GCGGCGCCACGC        TTGTAGGCCTTGAGC  52 186
CXD79_RS12665 2605302 .. 2605315 +  -9.5  -2.75183   TCCTTATCATGCCTC               GGCGC TGTC GCGCC                TCATTGACTGCCACT  55 87
CXD79_RS12670 NONE
CXD79_RS12675 2607537 .. 2607562 +  -7.5  -3.16881   GCACGAACCCCAGCT         TGCGGTGCAGCG CGA CGCTGC-CGGCG         TTGGTGGCGTCGATC  53 148
CXD79_RS12690 2611527 .. 2611556 + -22.3  -2.62616   GACATCCGCGACAGA       GTGTGCCTGTCCC CGCT GGGACAGGCACAC        TGCTCTACGCCATGA 100 97
CXD79_RS12730 NONE
        recN 2621551 .. 2621591 +  -2.3  -4.75776   ATTTACGAAAAATGT  CAAGGATCTTCAGGCGGGG AAA CGTCGCCTTCAGGCCCATG  TTTTTCAGTTCGCTT  76 453
        bamE NONE
CXD79_RS12750 2623364 .. 2623376 +  -4.7  -3.29144   TTGATCGATCAGCCA                GCCGG CGG CCAGC                TTGTAGCGGCCATCG  49 263
CXD79_RS12760 2624488 .. 2624509 + -14.5  -5.63236   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTTTTGCAT 100 37
CXD79_RS12805 2635080 .. 2635095 +  -3.2  -3.40403   CGCGACGCTATTCTC              GACTTC CCAC GAAGCC               TTGTCCTGCGAAGGG  48 53
CXD79_RS12810 NONE
CXD79_RS12815 2637589 .. 2637604 +    -4  -3.90588   CGCGCAGCGATACCC              CTTC-GG ATT CCAGAAG              TTTCATTACCCCATA  58 426
CXD79_RS12940 2662713 .. 2662745 +  -8.9  -4.07568   CCCGCCAGGAAGCGG      GCCTGCCGCGCGTAC GCG GCGCGGTCGGCGGGC      TTTTCGCCAAAGCGC  72 179
CXD79_RS12955 2665303 .. 2665353 +  -7.2   -4.0162   CCGAGTTTCGCGCCG CCGCAGCGCTCGCTGCTGGGCGAG ATC CTCGACTGGATGCTGGCGCCGCTG TTTCTCCTGTGGCCC  66 105
CXD79_RS12960 2666733 .. 2666748 +    -4  -3.71917   CCGGGCTGGTACGCG              CGATAG TTAC CTATTG               TTTCAAATTTAAGAT  54 61
CXD79_RS12965 2668581 .. 2668609 + -10.9  -4.60041   TGATAACCATCCCCC        GCCGGGTTGGACC GCT GCGCCAATCCGGC        TTTTTCAAGCTCCCT 100 38
CXD79_RS13010 2677397 .. 2677410 +  -9.5  -2.70932   CGAAGCCCTCTCCTA               GGCCC GCGC GGGCC                TGATTGCACAAGAAG  55 25
CXD79_RS13015 2678939 .. 2678961 + -19.2  -5.53288   TGCGTGCCCCGTACG           GGCCCGACAC GAT GTGTCGGGCC           TTTTTTTGCCTTGCG 100 243
        rdgC 2680651 .. 2680676 +  -6.7  -4.68724   GTAAATGACGTCCGC         GCCCGCCAGGCC CTC GGCCAG-CGTGC         TTTTCTGTTCGATCA  82 434
CXD79_RS13050 2683699 .. 2683746 + -21.2  -4.15788   CGATCCAGCGCCAGT GCGGCTGAGCATGCCGGCGGGC GCCT GCCGGCCGCCTTGCTCAGCCCC TTTCTTGAGCACGTT 100 18
CXD79_RS13070 2686214 .. 2686272 +  -2.2  -4.33153   CTGTCCACGCGCGCA C-GG-GCCGAGGAAGCGTGCCGGACTGCC CACG GGCAGCCCGGCGCGGA-CTACAGCTCCAG TTTGTTGATCTTGGC  65 78
CXD79_RS13080 2688228 .. 2688238 +  -6.8  -3.03159   AGCCCAATCAATGAC                 CGCT CGC AGCG                 TCTTGGGCGCGTTCG  51 121
CXD79_RS13125 2695643 .. 2695677 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS13135 2698027 .. 2698039 +  -3.4   -4.2349   CTGGACAAGTCCTTG                TTCC AGCGA GGAA                TTTTCGATCTGCGCG  63 69
CXD79_RS13145 2699430 .. 2699464 +  -2.1     -3.94   ATTGACAGTTCACAC    CTAG-CGTCC-ATGCCA GCT TGGCGTAGGACGTCCCG    TTGTTTACGGCTTGC  56 22
CXD79_RS13170 2702983 .. 2703017 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS13240 NONE
CXD79_RS13265 2721651 .. 2721695 +    -7  -3.67792   ACTGCTGGGCGCGCG CCACGCGCTCGGCATTCAGCC ACTT GG-TGACGGTCGTGCCCGTGG TTTCCCTGAATCTAC  64 358
CXD79_RS13275 2723701 .. 2723748 +  -8.4  -2.55544   AGGTCATCAGCAGCG CCATCGGCGTCACC-GTGACCTG GCC CAGCGCATAGTTGAAGCCGATGG TCACTTCCGTGATGA  51 224
        sulP 2729430 .. 2729445 +  -3.9  -3.54424   GCTGGCGAGCGGCCC              CGGCC CGGTCA GGCTG               TTTCCGGCGCTCACC  51 379
CXD79_RS13365 2741987 .. 2742000 +  -4.5  -3.54459   CGGTGGCAGGCCGTC               GCCAGG ATT CC-GGC               TTTGCGACGACTTGG  52 57
CXD79_RS13395 2748009 .. 2748030 +  -2.9  -2.65264   AGGCGGTAGGTGGCG           GCGAGCCAGT ACG AC-GGCATGC           TGCTGTGCGTGGTCG  39 47
CXD79_RS13440 2758856 .. 2758873 +  -4.1  -4.31943   TCCCGCCGCCCGCCA             TGAACCG GGGA CGCTTCA              TCTTTTTTCTGTACC  68 42
CXD79_RS13445 2759652 .. 2759675 + -16.7   -3.0806   CCGGGCCCGCGCGCC          GGCGGCGCG GATCGG CGCGCCGCC           TCTTGCGGATTTCGC  81 48
CXD79_RS13450 2760962 .. 2760972 +  -2.4   -4.4078   CATACGCGATGGTCT                 GGCC CTG GGGC                 TTTTCGTTGGCCAGC  68 83
CXD79_RS13480 2767840 .. 2767863 +  -2.2  -4.07568   CGGCAGGCGCCGCCG          CGGCCTGAGC GCCT GCCCAGCCCC           TTTTCCCGCCCCGAA  58 18
CXD79_RS13485 NONE
CXD79_RS13490 2770556 .. 2770581 + -13.3  -2.57132   CCTGGCGATCCTGCA         CGATGTGCCGC GTCA GCGGCGTATCG          ATTATCCCGGGCGCC  66 269
CXD79_RS13520 NONE
CXD79_RS13525 2776946 .. 2776983 +  -2.5  -4.58395   CGGCACGAGGCCGCG   GCCG-TCAATTCGCGCGG ATC CCGCGCTCGTCGATCAGC   TTTTTCCAGCGTGCG  70 112
CXD79_RS13540 2780123 .. 2780165 +  -3.9  -3.84406   GGCCGAATTAGCGCG CG-CCCGCCAGCCTGCCTGG CCGG CCAGCCAGGGGCGCGGATCG TTGTTGTCATAGCGG  58 339
        queE 2782221 .. 2782243 +  -4.8  -3.64703   CCATGACTGTCCGTC           CCATCGCG GGAGATG CGCGATGA           TTTCCGTCACCCGCC  55 35
        queD 2782924 .. 2782948 +  -7.8  -3.31792   CTTGGCGCCCTGCCC         CA-CCAGGCGC TTGA GCGCCGGGATG          TTGTGGGCGTCGTAC  55 266
CXD79_RS13580 NONE
CXD79_RS13585 2786187 .. 2786204 + -11.3   -4.1822   GCGCTCCAAGGCGGT             GTACCGC CTGG GCGGTAC              TTTCTTCGGCTCGGC  89 192
CXD79_RS13600 2788513 .. 2788540 +  -5.5  -2.53263   TGCACGCGGCCCTGC        CCGGCGGTCGAC ACCAG GTCGG-CGCCGA        TCAATTGCGCATCGC  42 428
CXD79_RS13615 NONE
CXD79_RS13620 NONE
CXD79_RS13625 NONE
CXD79_RS13630 NONE
CXD79_RS13635 2804666 .. 2804680 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 128
CXD79_RS13645 2806452 .. 2806498 + -12.1  -3.35679   GCAACGCCGGCCATG GCGGCCGGCGTTGCGCCCTGCG AACC CGCCGCGATCAGCG-CGGCCGC TTGTCGATGACGCGC  73 45
        paaX 2817189 .. 2817214 +  -4.6  -3.62597   GCGCCTGCAGCAGCG         TGGCCGCCAC CAGCGC GTCGCCGCCA          TTGTTGCCCGGTCCG  54 497
CXD79_RS13720 NONE
        rsgA 2820194 .. 2820218 +  -4.3  -3.78419   GTCCCCACGAGGACA         GGCACCTGCCG ACTCC CGG--GGTGCC         TTGTATCTTTCCTCC  58 56
CXD79_RS13755 2826686 .. 2826738 +  -7.4  -3.36054   GGGCAAGACCACCGC GTGCGGCCTGCTGGCGCAGGCC GACCCGCAG GGCCTGCACCTGCCGTCCGACC TGTTCTATGGCTTTC  59 151
CXD79_RS13775 2830523 .. 2830550 + -11.2  -3.77119   CGCGCGCGGCGTGAT        GCGGGGCCCGGGC GGG GCCTG-GCGCCGC        TTGTATTCGTTGATG  74 501
        argH 2835026 .. 2835043 +  -9.8  -4.65895   CGCTCCATGTAAAAA             CCCGGC CTGCGC GCCGGG              TTTTTACATGCCGCG  93 49
CXD79_RS13810 2837935 .. 2837945 +  -8.2  -2.80622   CCGCGATTTCCGGCC                 GCGC GCC GCGC                 TATGATCGACTATCT  52 10
        moaA 2839405 .. 2839415 +  -4.6  -3.05384   TCCTCGCGGCTGTCC                 TGGC GTG GCCG                 TTCGGTGCGCAGCGG  46 372
CXD79_RS13845 NONE
CXD79_RS13850 2846627 .. 2846645 + -13.8  -3.05463   TCGGCCAGCACGGCC             TGGCGGCG TAG CGCCGCCG             TTCAGTCGGCGGGCT  72 15
CXD79_RS13860 2847816 .. 2847831 +  -4.6  -3.14404   CGCCGCCACCATGCT              GGCCCA GGCC TGAGCC               TTACGTAGTTGCTGT  47 13
CXD79_RS13865 2849338 .. 2849373 + -13.2  -3.00298   AGCGACTGCCGCGGC    AAAGGGAGCCTGTCCC CGCT GGGACAGGCTCCCGGG     TATGTAGTTACCACG  70 57
CXD79_RS13880 NONE
CXD79_RS13885 2852986 .. 2853004 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 297
        cadR 2857001 .. 2857011 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS13905 2857994 .. 2858033 +  -9.4   -3.5361   CCTGGACAAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD79_RS13910 2859168 .. 2859182 +  -2.7  -3.57144   CTTGCTCGGTCATGT               AGGCC GACAG GGCCA               TTTCCAGCTGCAGGG  50 129
CXD79_RS13950 2867259 .. 2867293 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS13970 2871369 .. 2871379 +  -6.8  -3.40878   CGCGCTGTCGGGCAC                 GCTC ACC GAGC                 TCTTGTTCGCCTCGT  56 335
CXD79_RS13990 2877716 .. 2877736 +  -8.1  -2.62263   GATCGTGCAGCATCT            CGCGGGCCG GGC CGGACAGCG            TGATCTCGCCCGACT  48 139
CXD79_RS14065 2902135 .. 2902155 + -15.4  -5.13343   GTCGTTATTATTTGA            GGCGGGGC TGCAT GCCCCGCC            TTTTATTTTGCATTG 100 92
CXD79_RS14070 2902737 .. 2902752 + -10.4  -4.62069   CCAGAACGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTGCCATGCCGG  93 81
CXD79_RS14100 NONE
CXD79_RS14105 NONE
CXD79_RS14110 2911136 .. 2911162 +   -15  -3.60865   ACCCTGACCCGGCCG         CGCCGGCGCCGC CCC GCGCAGCCGGCG         TTCTGCTTTAGAATC  81 34
CXD79_RS14115 NONE
CXD79_RS14120 2912228 .. 2912244 +  -2.1  -2.64099   AAACAAACCCATCAG              GAGCCCC CAT GCGTCTC              ATTCTGCTCGGACCG  38 108
CXD79_RS14125 2912898 .. 2912956 + -13.8  -3.39895   GCAGAGCTAAACCGC GCCGCG-AGGCCGCCGCGCCGCCCGCGCA GGGG TGCGCGGCCG-CGCG-CGCCCTGCCCGCC TTCATTGCTAGCCAA  77 31
CXD79_RS14130 2913753 .. 2913781 + -18.2  -2.84602   AGTAATCCCTCCCCC        CGACGTGCCGGC TCGAT GCCGGCACGTTG        CTTTGGTACCCTGGC  86 36
        murJ 2915409 .. 2915441 +   -12  -4.20516   AATAGTGAAAATCAC      AACAAAGACCGGCC CTTAC GGCCGGTCTTTGCA      TTTATTGGATCGACA  91 65
CXD79_RS14140 2916623 .. 2916646 +  -6.8  -3.58037   GGGCTTGCAATCCCC          GTCGGAC-TTG ATA CAATGTCTGAC          TTTGCCGAATTCATA  58 74
CXD79_RS14145 2916982 .. 2916999 + -11.3  -5.45802   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC 100 69
CXD79_RS14165 2919690 .. 2919700 +  -2.4   -3.7941   AGCCGATATTGCCGT                 TGGC GCC GCCC                 TTGTTCTCCACGATG  54 342
CXD79_RS14210 NONE
CXD79_RS14215 2929540 .. 2929552 +  -3.3  -3.07233   AAGCCGCCAAGAGCA                TCGGC TAA GCCTA                TATTGCCCATTGTCA  42 18
CXD79_RS14220 2931325 .. 2931344 + -13.6  -5.40072   CCACCCATGCCGGAA            GAAGGCCC TGCG GGGCCTTC             TTTTTTTGCCCGGCG 100 44
        pdxA NONE
CXD79_RS14230 2933870 .. 2933900 + -11.1  -3.06183   CCAGCTGCCCGCACT      G-GCGCGCCAGGCGC CGC GCG-CGGGCGCGCAC      TTCCATCGAGCTGAG  62 459
CXD79_RS14290 2943765 .. 2943783 +  -5.8  -3.14931   CCTTGCCCGGGCCCG             GCGCTGCC ATC GGCCACGC             TTGCTAACGCCTCGA  49 98
CXD79_RS14295 NONE
CXD79_RS14300 2946338 .. 2946372 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
CXD79_RS14325 2951702 .. 2951720 +   -11  -3.55444   ATTTCGCCCATGCGG             CGCTCGAT CAG GTCGAGCG             TTTCCAGCGTGAAGG  71 424
CXD79_RS14335 2954432 .. 2954466 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS14360 2960770 .. 2960811 + -26.8  -3.54903   GGCGCGTTCCCTTCC GACCCGATGCGTCGCCGGC CCGTT GCCGGC-ACGCATCGGGTC TTATCCATTTTATAT 100 62
CXD79_RS14365 NONE
CXD79_RS14370 2962595 .. 2962610 +  -3.3  -4.28548   GCATGTCGCACCGCT              GAATC CCGCAC GATTC               TTTTCATCACTCCGT  63 24
CXD79_RS14375 2963484 .. 2963509 + -20.5  -4.56597   CCGGGCCTGCATCCC         GCCAAGCCGCC CTCG GGCGGCTTGGC          TTTTTCACCCGGCCG 100 68
CXD79_RS14380 2963679 .. 2963724 +   -28  -5.84381   AGGCCAGCAACAAGG CCAGCAAGAAAAAAGCCGCT CATGGA AGCGGCTTTTTTCTTGCTGG TTTTTTTCTTGCTGG 100 58
CXD79_RS14385 2964916 .. 2964928 +  -3.3  -4.11216   ACCTATTGACAGTTC                ACAGC TAA GCTGG                TTTTCCGAGTCGCGC  59 18
CXD79_RS14390 2966129 .. 2966146 +  -5.5  -3.29144   CTGGCCGACGCCACG             CGACTCT ACGA AGAGGCG              TTCTGACGCCGCTGG  51 2
CXD79_RS14430 NONE
CXD79_RS14435 NONE
CXD79_RS14440 NONE
CXD79_RS14445 NONE
CXD79_RS14450 NONE
CXD79_RS14455 2976107 .. 2976146 +  -6.5  -3.17075   GATGCGCAAGGCGCA GG-CGTGCGATGGCCTGTA TTCG TAC-GGCCATGTCACGGCC  TTGCCTTACGAGCCG  51 275
CXD79_RS14465 2978154 .. 2978164 +  -5.4  -3.25823   CGTTTTCCGAGCTGG                 CTTC CAT GAAG                 TTCATATAGACAGGC  51 6
CXD79_RS14470 NONE
CXD79_RS14475 2980257 .. 2980283 + -10.9  -4.52857   GGCCGCGACGGCTGG        CGCGCCAGGACG AGGC TGTCCTGGC-CG         TTTTCTATGACACGT  95 46
        soxR NONE
CXD79_RS14490 2981936 .. 2981961 +  -5.4  -3.34398   CGTAAGGCAGTATTG         CCGGCTGTATC CCGAT GGTGC-GCCGG         TCTTTGCGCCCGCGC  51 57
CXD79_RS14495 2984323 .. 2984357 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS14510 2986787 .. 2986803 +  -4.3  -3.14132   GACAGGCAGCAATCG              CCGGGCT GTT AGCTCAG              TTGGTAGAGCAGCGG  47 140
CXD79_RS14515 2986875 .. 2986904 + -17.3   -5.0925   CACCATGATTTGTAA       GGCCGTTAGTGAT AGTA GTCACTAACGGCC        TTTTTGCTTTTCGGC 100 36
CXD79_RS14560 NONE
CXD79_RS14565 2993758 .. 2993774 +  -5.8  -3.05596   GAATACGTGATCAGC             GGCGCGG CCGG CC-CGCC              TTCGCTCAGGGCATG  48 332
        panB 2995547 .. 2995562 +  -3.2  -4.07568   TCCTGCAAACCCGCT              CCC-GCG CGC CGTAGGG              TTTTCGCCACAGGCA  59 253
CXD79_RS14580 2997172 .. 2997206 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 256
CXD79_RS14610 3003088 .. 3003107 +   -10  -3.33261   GCACGCTGGCGATGG            CGTCGGCGG CCA CCGCC-ACG            TTGTCGCGGTTCAGG  63 72
CXD79_RS14640 NONE
CXD79_RS14645 NONE
CXD79_RS14650 3011835 .. 3011855 +  -8.9  -3.46602   TTGTACCGAGTAACC            TTGCGCGGG CCG CCTGCGCCA            TTGTGATGTCCACGG  60 84
CXD79_RS14660 NONE
CXD79_RS14665 3014761 .. 3014783 +  -6.9  -3.35679   AGGCATCGACCAGCA           GGCCCTGGT AACGC GCCACGGCC           TTGTGCGTCACGCCG  52 304
CXD79_RS14675 NONE
CXD79_RS14680 3017938 .. 3017960 +  -5.4   -3.7941   ACGAGCTGACGTCGT           GCAGGTCGGC GAT GCGGATCAGC           TTCTTGTAGACCGTG  58 115
CXD79_RS14695 3020821 .. 3020851 +  -6.8  -3.39784   TGGCGCACCAGGCTG      GGGCCGAGCGTGC CGGGAT GC-TGCTCGGCCA       TGTTCTTCAGGCTCC  55 431
        gcvA 3025328 .. 3025370 + -10.5  -3.56092   GGCAGCGTGAGCGCC GCGGCGGCCTGCGCGATGGT CATG GCCACCAT-CAGGTCGCCGC TTTGCGCGATGCTCC  67 412
CXD79_RS14735 3028428 .. 3028466 +  -9.6  -3.14132   CGGATCGGCGATGCC G-CCGACCGCGCGCACCGG CATG CCGGTGCG-GCGG-CGCAC  TTGCTCGGCCAGGCC  59 213
CXD79_RS14745 NONE
CXD79_RS14790 3037678 .. 3037710 +  -3.4  -2.78463   CCACTTCGGCCGGCT     CCATCAGCCGGTC GAACGGCA GGCCG-CTGAGGG      TCTCCTGCCAGCGGT  40 172
CXD79_RS14840 NONE
CXD79_RS14845 3046236 .. 3046246 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 64
CXD79_RS14850 3047388 .. 3047408 +  -2.4  -2.59267   GCCCAGCGTCGAGAT            CAGCACGA CGTAA TCGGGCAG            CTTGGTGTCCTTGCC  38 163
CXD79_RS14865 NONE
CXD79_RS14870 3050754 .. 3050769 + -10.4  -5.86332   ACGAACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTGCCTTGC 100 58
CXD79_RS14885 3053498 .. 3053517 +   -15   -4.8622   GCGTGCAATGAAAAA            GGCGGCTC GCAT GAGCCGCC             TTTTTCATTGCCGGC 100 49
CXD79_RS14905 NONE
CXD79_RS14910 3058685 .. 3058713 + -14.6  -5.40072   GCCCGCCATGCAGCC       GCCCCGTTGGACG ACCA CG-CCAGCGGGGC        TTTTTTTCGCCGGCC 100 78
CXD79_RS14915 3060211 .. 3060239 +  -5.2  -3.36569   GCGCACCATGGGCGT       CGTCG-CCGTCGC CCTG GCGGCGGTCAATG        TATTTGGCGGCTTCC  53 231
CXD79_RS14925 3062067 .. 3062079 +  -4.7  -3.55622   TCCAGGCTCCAGGCA                TCGGC CTC GCCGC                TTTCCAGCAGTTCCC  54 334
CXD79_RS14935 3065185 .. 3065195 +  -6.8  -3.31144   CCTATTACGCCACGG                 CGAC GGT GTCG                 TTCTGACCATGGCGA  54 9
CXD79_RS14940 3066579 .. 3066595 +    -5  -3.15544   ACTCCTTCACCATGG              CGCCGC AACCC GAGGCG              TTCATGACGATGGCC  47 489
CXD79_RS14965 3084813 .. 3084850 + -16.4  -3.61398   GCGAGGCGGCCTTGA   TGGCATCGACGGCGAT CTTCAC ATTGCCGTCGGTGCCG    TTCTTGAAACCGACA  85 523
CXD79_RS14985 3088488 .. 3088509 + -18.7  -5.06414   TTCGTCCCGGAATGC           CGGCGCGCC TCAA GGCGCGCCG            TTTTTATTGCGCCAC 100 49
CXD79_RS15015 3092727 .. 3092743 +  -5.7   -3.4277   GCTGGTACATGAACC              CGTGGTC CTT GGCCTCG              TTGTAGGTCTTGCCT  55 128
        chrA 3095540 .. 3095561 +  -3.6  -4.11216   CGGATCGTCGTAGAC           GACGC-GCC ATACC GGCAGCGGC           TTTTCCACGTGGCCC  63 280
CXD79_RS15050 NONE
CXD79_RS15055 NONE
CXD79_RS15060 NONE
CXD79_RS15065 3102572 .. 3102591 +  -2.8  -3.23216   TTCAGCGTCGTCGAC            GCCAT-GCC CGA GGCTATGCC            TTGCTCGTGGTGCGC  46 280
CXD79_RS15075 3104303 .. 3104324 + -18.7  -3.28712   CGCCACAAACGACAA           CCCCCCGGG CAAG CCCGGGGGG            TTGTCGGCGAACCAA  93 70
CXD79_RS15130 3115671 .. 3115682 +  -5.8  -3.01712   GGGTACGGAAGCGGC                TGGC GATG GCCA                 TCTTGGCGCGCGGCC  48 303
CXD79_RS15140 3117979 .. 3117989 +  -4.6   -4.0371   AGGTCCACCATGGCC                 GGCG CCG TGCC                 TTTGTATGGAACATG  63 455
CXD79_RS15170 3121603 .. 3121631 +  -5.3  -3.87373   GCACATTTGGACAAT       TCATTGCGCCCG CCATGA TGGGCGC-ATGG        TTTATCCGCGCTGTC  60 141
CXD79_RS15180 3123849 .. 3123863 +  -3.5  -3.72576   GCGCGCAGGGCCGCT               TCGAC CTGAT GTCGG               TTTGCTCGGGCGCGC  54 348
CXD79_RS15210 3129806 .. 3129820 +  -3.5  -3.94746   GAATGTGCCGGAGGG              CGC-GC ACGC GCAGCG               TTTGCTTGAATCTCA  59 63
CXD79_RS15215 NONE
CXD79_RS15220 3132658 .. 3132672 +  -4.2  -3.14931   GTCGAGCACGGTGTC               GTCGTC GTT GACCAC               TTCATCGAACGTGAA  45 266
CXD79_RS15260 NONE
CXD79_RS15265 3140367 .. 3140378 +  -5.8  -3.78022   CTTCAGTAGCGGTCC                CAGG CCTT CCTG                 TTTCATCCCTCTACC  60 183
CXD79_RS15275 NONE
CXD79_RS15280 NONE
CXD79_RS15285 3143963 .. 3143978 +  -8.2  -3.53444   AGCCGCCGCGCCTCG              GCGTGG ATAT CCGCGC               TTTCGAACGCGGTGA  61 167
CXD79_RS15305 NONE
CXD79_RS15310 NONE
CXD79_RS15315 3149451 .. 3149487 +  -5.1  -3.02144   CGTCATCAGTGTCAG    CATCGGCCGGTTGGT CGACAGC ACCAGCCCGTCTATG    TATTCCAGCCCCTGC  46 127
CXD79_RS15325 3153548 .. 3153576 +  -4.4   -3.2614   AGGCCACCGCGGTGC       CGCG-CGCGGCCG GCAC CATCTGCGTCGCG        TTGGTCTGCAAGGTG  47 226
CXD79_RS15350 3159416 .. 3159451 +   -24  -3.73224   ATTCAGAGCGATCAC    TTCGGCGGGCGCGCCT TGCA GGGCGCGCCCGCCGCA     TTTGGTAACAACTAA 100 47
CXD79_RS15355 NONE
CXD79_RS15360 3163961 .. 3164012 + -18.2  -2.83677   AGGCCGCCTATCGGC GCCATTTGAAATGGCTCGCGCCGAC GAG GTTG-CGGGGGCCATATCAAATGGC TGTGCTGAATTCATT  86 141
CXD79_RS15365 3164722 .. 3164744 + -20.6  -4.65895   TTAGCAGCACCTTAA           GCCGCCTGGC TCC GCCAGGCGGC           TTTTTCCGTCCCGCG 100 57
CXD79_RS15370 3165669 .. 3165706 + -12.5  -2.64155   GCAGCACGGCGCAGG   CGCCGCCCGCCACGCCC GGCA GGGCATGCAGGGCCGCG    TCGATTTCCGCCAGC  62 290
         mpl NONE
CXD79_RS15445 3178568 .. 3178583 +  -2.4  -2.64354   GGGGCGCTCCTGACG              CCGCCG CGCC CGATGG               ATTCTCACTATGTAC  38 72
CXD79_RS15450 3180512 .. 3180531 +  -2.7  -2.76468   CGCCCTAAAATGCAC            GGGTGCG ACGCTC CGCTTCC             TCCTCTTCGATCCTG  40 61
CXD79_RS15455 NONE
CXD79_RS15460 3182308 .. 3182318 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS15465 NONE
CXD79_RS15470 3184228 .. 3184251 +  -5.2  -3.28712   CAGCATCCGCCACGG          TCCAGGCC GAACACCA GGCCCGGA           TTGTCGGGCGAGCCG  49 374
CXD79_RS15495 3188244 .. 3188265 +  -9.3   -4.1891   GTCGCTCAGGCGCTT           GTCGCCGGC CACC GCCAGCGGC            TTTATCTTGCCGGCC  75 332
CXD79_RS15520 3194571 .. 3194599 +  -8.7  -3.51032   GCGGCTTGCCCAGCA        GATACAGGTCGCC GAT GGCGTCCAGGATC        TTGTGCTTCACGAAT  61 307
CXD79_RS15605 3215726 .. 3215736 +  -4.6  -3.30771   CGCCGCCCGTGAAAA                 TCGC ATT GCGG                 TTGTAGAGCATGTGC  49 481
CXD79_RS15620 3218025 .. 3218037 +  -7.7  -2.54523   GATCGGGCCAAAGGG                CGTAC GGC GTACG                TCCCTTCCCGTCTCA  50 43
        hppD 3227216 .. 3227236 +   -14  -3.60151   GCCTGGCGCGAGTAA            GGCCCACC CTCGC GGTGGGCC            TTGTCATTTCGGGCG  78 46
CXD79_RS15680 3231118 .. 3231130 +  -9.1  -3.18681   GAGCACGACCTCGCC                CTGGC CGC GCCAG                TTGATGACCTTGCCC  59 384
CXD79_RS15690 3232842 .. 3232855 +  -5.2  -3.21099   TGCATGAATACTGCG               CGCG AGTTAC CGCG                TTGATGCTAGAGCAG  49 450
CXD79_RS15710 3235011 .. 3235026 +  -6.1  -5.24129   TACAGAAAACCAAAC              GGCAC CACCAA GTGCC               TTTTTTGTGCCCGCC  90 220
CXD79_RS15715 3235575 .. 3235589 +  -4.2  -2.94411   GCATGAACTAAGGAG               ACCATG AAT CATGGA               ATTGTTTGACAACCT  44 30
CXD79_RS15720 3237128 .. 3237145 + -14.1  -6.11644   GCCGGCCGGCGCGAA             CCGGGCC CTCG GGCCCGG              TTTTTTTTTGCCTCG 100 63
CXD79_RS15725 NONE
CXD79_RS15730 3239916 .. 3239955 + -26.5  -3.05384   CTGCGCGACTGAGGC  CGCGGCGCCGGCCGCTCG CAGCC CGGGCGGCCGGCGCC-CG  TTCGATCAGGCCGCC 100 29
CXD79_RS15760 3243963 .. 3243985 +  -6.8  -2.53911   GAATGCCAGTTCGGC           CAGCCGGCGG ATG CCGTCGTCGG           TGAATTCCAGCTTCA  44 243
CXD79_RS15790 NONE
CXD79_RS15795 NONE
CXD79_RS15800 3251170 .. 3251226 +  -7.8  -2.91264   AACTCGCCGCCGCCT TGCGGCCCTG-AC-GGCGCTGGGCGCGC TGT GGGCGGCCGGCGCCGGTGCGCATCCGCA TATGTGGATCGACGC  52 15
CXD79_RS15805 NONE
CXD79_RS15810 3252799 .. 3252811 +  -4.7  -3.23637   GACGAATTTTGCACG                CCCGG GTG CCGGA                TTCAATTGATATGTT  49 56
CXD79_RS15815 3255295 .. 3255318 +    -3  -3.85698   GGCGCCGGCGGCAGC          CAGTTGCGGG CGCG CCTGCAACCA           TTTGTCCAGCGCGGC  56 362
CXD79_RS15845 3260850 .. 3260868 + -17.4   -4.4078   TCCCGTGTCGCGAAA             CGCCCCGC CTG GCGGGGCG             TTTTGCTTGGCCGCG 100 48
CXD79_RS15850 3261191 .. 3261205 +    -7  -3.08371   GCAACAACTACTGAG               GGGCGC ACG GCGGCC               TGTCTTGGCCATGTC  52 27
CXD79_RS15855 3262507 .. 3262540 +    -6  -3.34005   ATGAAGCGGGAAAGG     CGAGTACGCGCCGTG CGGAT CATGGTGC-TACGCG     TTGTCCGGCTTCATT  53 223
CXD79_RS15860 NONE
CXD79_RS15865 NONE
        metF 3265290 .. 3265300 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS15875 3266420 .. 3266432 +  -6.2  -3.01924   GAAGCGCTCGAACGC                GGCC AGAAA GGCC                TGTTCGGCGGCGCTC  48 141
CXD79_RS15900 NONE
CXD79_RS15905 3274055 .. 3274075 +    -4  -3.57561   CAAGGGTTCGGGCAT           GTCGC-GGCC CAC GGCCAGC-AC           TTTGAACAGTTCGCC  51 94
CXD79_RS15925 3279336 .. 3279375 + -15.6  -2.64099   TATCCGGGCCGCCCG  CGCGCGGGCGGCC-GCGCT GCT GGCGCTGGCCGGCTGCGCC  ATTCTGCTGGGAGCC  74 277
CXD79_RS15930 3280854 .. 3280867 +  -3.7  -2.62263   GCTGTTCTCGCTGCT               GCCGC TCGA GCCGC                TGCTGTAGGCGCGCT  40 4
CXD79_RS15955 3285478 .. 3285520 + -11.9  -3.18681   CCAGTTCGGCCTGGA CCTGC-GCACGGGTGGC-GGC GTC GCCGGCCGGCCGGGCCGCGGG TTCCTGCGCTTCGCC  64 354
CXD79_RS16030 NONE
CXD79_RS16035 3298331 .. 3298345 +  -3.4  -3.96327   GCAGAAATTCATGGC               GGCCTG CGC CCGGTC               TTTCTCCTCGACCGT  58 202
CXD79_RS16045 NONE
CXD79_RS16050 3301711 .. 3301745 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 280
CXD79_RS16070 3307699 .. 3307736 +  -7.6  -3.03124   GTGGCTGAACCGGAA   CGGCGAGGTTG-CGGCC GGCTG GGCGGGCAACCAAGCCG   TGTTCAAGAATCAGC  53 33
CXD79_RS16075 3310348 .. 3310384 + -12.9  -2.72144   TTTGATGCCCAAGGG    CTGGCGCAGTCCGCCAG GCG CTGGCGGACGGTCCTGG    GTTTCGAAAGAATCG  67 73
CXD79_RS16085 3311817 .. 3311831 +  -4.9  -2.88249   ACACCGCTGCCTGGC               GTGGC CGAGT GCCGC               TATGTGACCAATATC  44 173
CXD79_RS16190 NONE
CXD79_RS16195 3336311 .. 3336321 +  -8.2  -3.53012   CGCATCGATGGGCCC                 GGCC GGC GGCC                 TTTGCGCCGGCCGCG  62 50
CXD79_RS16200 NONE
CXD79_RS16205 3338452 .. 3338462 +  -6.8  -3.85817   AAATGCGGGGCGGCG                 CTGG CCG CCAG                 TTTCTGCGGCACCGT  63 189
CXD79_RS16215 3340754 .. 3340764 +  -2.4  -4.19238   CGCCGTTGGGCATTG                 CGGC CCG GCCA                 TTTTCCGATTCAAAA  62 92
        fahA 3342192 .. 3342219 + -21.4   -4.8622   CTCCGGCTTGCCGAA        GGTGCCTGTCCC AACC GGGACAGGCACC         TTTTTCCTTGCGGGC 100 108
CXD79_RS16250 NONE
CXD79_RS16255 3352155 .. 3352185 +  -3.9  -2.57132   CGCGCTGGCGCAGCA       GGCGCGCGG CCTCGACGAATTC CCGCACGCC       CTTGTCGCGCAGCAG  40 506
CXD79_RS16310 NONE
CXD79_RS16315 NONE
CXD79_RS16320 3366926 .. 3366944 +  -4.4  -2.62184   CCCTCGCGGATGACC             TGGTGCAC CAC GCGCTCCA             TGATCTCGGGCGAGG  40 362
CXD79_RS16330 3369988 .. 3370021 +  -5.1  -3.21099   GATGGTGCCGTGCTG     GATGTTCCCGGTGGC GCTG GCCTGCGGCAACACC      TTCGTGCTCAAGCCG  49 495
CXD79_RS16340 3372882 .. 3372902 +  -3.8  -3.11459   AGGGCGGGCCTGGCC            CGCCCGCG CAACC CGAGGGAG            TTCCATGCTGGTATT  45 46
CXD79_RS16345 NONE
CXD79_RS16350 3375004 .. 3375057 + -15.3  -3.01712   TGGGCGAGGACATCG TCACGGCCA-GCGCGCGGCG-GCGG CGCGAA CTGCGCGCCACGCGCATGGCCATGG TGTTCCAGGAGCCCA  77 291
CXD79_RS16360 3377836 .. 3377846 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS16365 3379080 .. 3379096 +  -2.1  -4.62783   CTTTTAGCCAGTTTC              CGGATGA ATT TCCGCCG              TTTTTCGGCTACGTC  70 255
CXD79_RS16415 3386282 .. 3386322 +   -14  -2.80816   ACCTTGCTGGACCGC GCCTGGGGGCTGGAGGCGC ATTC GCGCCTG-AGCTGCCAGGC  TATCGTGGCTGGCGA  71 268
CXD79_RS16440 NONE
CXD79_RS16445 NONE
CXD79_RS16450 NONE
CXD79_RS16455 3393136 .. 3393163 +  -8.2  -3.78775   ATGACCTTGTCGGCG        TCCTCGCCCGCC AGCG GGCGGCCGCGGC         TTTGCTGGTGGCGCA  67 131
CXD79_RS16530 NONE
CXD79_RS16535 NONE
CXD79_RS16540 3410674 .. 3410688 +  -7.8  -3.30771   GGCCTGGCCATGGCG               CAGGTC GAC GGCCTG               TTCTGCGCCATGTCC  56 163
CXD79_RS16550 NONE
CXD79_RS16555 3413829 .. 3413863 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS16570 3418141 .. 3418163 +  -4.8  -4.67982   GGCCTTATCCGTCTG           GCAGGTCATG GGG TATGGCCTGG           TTTTCTTCGGTGGCA  75 224
CXD79_RS16580 3420233 .. 3420256 + -13.8  -2.54702   TGGGTGCGCACCGGC          GCGCGCTGGC GGTG GCCAGCGAGC           TGCCTTCGCGTCTGT  69 511
CXD79_RS16595 3422896 .. 3422906 +  -8.2  -3.53012   GTGTGGATGGTGACG                 CGGC ACG GCCG                 TTTCAGCGCCCGCAG  61 275
        gloB NONE
CXD79_RS16615 3426203 .. 3426228 +  -3.3  -2.71712   GCGCCCGTCCGCCAA         GCCGCTA AAATTCCTACAA TAGCGGC          CTTTCCGCAAGGCAA  40 64
        fabI 3427076 .. 3427104 +    -6  -3.78419   CCCCGTAGGGGGACT        GGCACCGG CCAAATTCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 57
CXD79_RS16625 3428331 .. 3428360 + -17.9  -2.62616   CTGTCCCCGCAGGGA       GGGTGCCTGTCCC CGCC GGGACAGGCACAC        TGCTGTACGCCATCG  85 56
CXD79_RS16635 3430053 .. 3430086 +  -8.9  -3.53091   CCTCGATACGGCACG     TGCTGCAACCAGGC GCCGCTG GCCTGGC-GCAGCA     TTTCGCCGGCCAGGT  61 460
CXD79_RS16655 3433824 .. 3433834 +  -4.6  -4.12188   AGACCGTGTGGGGCA                 TCGG CTA CCGG                 TTTTCGCCCTGATGA  62 3
CXD79_RS16660 3435273 .. 3435325 + -14.1  -3.33696   TGCGAAGGCTTGACC CGCCGGCCG-CGCCG-TC-AGGCGCC CGGC GGCGGCAAGAGCGGCACCGGCCGGCG TTCCTTGCCGAACAC  75 28
CXD79_RS16675 3439619 .. 3439656 + -16.9  -3.18274   CCCGACAATCCGCTG   TCGCCGGCCGCC-CTCCG CTT CGGGCCGGCGGCCGGCGC   TTCCATTCCAATCCA  84 85
        minC 3440611 .. 3440629 +  -2.4  -3.86346   GCCTTCATACGCTTT             TTGCTTTA CGA TAACGCGA             TTTGTACGCACATAA  54 87
        minD NONE
        minE 3441898 .. 3441916 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 191
CXD79_RS16740 3452230 .. 3452249 + -10.6  -5.50499   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTACCTGTAA 100 49
        uvrA NONE
CXD79_RS16755 NONE
CXD79_RS16760 3460305 .. 3460347 + -14.1  -3.07935   AGGTGCAATACCACT GACT-CCGGTGCCTGTCCCC GCAG GGGGACTGGCACCGGCAAAC TTCCGTGCCTGCCGT  72 24
CXD79_RS16765 3462006 .. 3462021 +  -2.4  -3.01712   CCGGGCTTGCCCAGC              GCGGCG CGGC TGCCGA               TATTGACGACCCGCC  41 437
CXD79_RS16780 3465099 .. 3465133 +  -5.4  -3.53811   GCCTTGCTCGCCGCC     GCGCCTGCCGCCTGAC CAT GTCCGCCGCCCGGCTC     TTTGCCCGCAGTCCC  54 11
CXD79_RS16785 3466352 .. 3466376 +  -9.1  -3.01712   GCTTCGGACAGGTCG          CCGGCGCGCAG CGC CAGCGGGTCGG          TCTTGCCGCCGGCGC  55 524
CXD79_RS16795 NONE
CXD79_RS16800 3469053 .. 3469070 +  -2.6  -3.05463   CGCGGGCGCGGCGTT             GGCGGT ACACTG ACAGCC              TTCCATCCAGCCGGT  41 52
        pdxH NONE
CXD79_RS16810 NONE
CXD79_RS16815 NONE
        purU 3472339 .. 3472353 +  -5.6  -3.05384   CGAAATGGCGCAAGG               CCGCCT GCA AGGCCG               TTGCCTGCAGGGACG  46 65
CXD79_RS16845 3478187 .. 3478211 + -12.8  -3.65902   GCAAGTGCAGTTTCG          CGCCACGCGC ATCCG GCGCGTCGCG          TTTCACTGGCATCGC  77 90
        apaG 3484459 .. 3484489 + -10.3  -4.13945   CATGCCGCGTACACT       GCACTGAGCCGGG CTCCT CCCGGCACGGTGA       TTTTCCGATCCGCAT  78 19
CXD79_RS16885 NONE
CXD79_RS16890 3486947 .. 3486971 +  -3.4  -3.08032   GGCAACTCATCGAAG         GGGCCTCGCGC AATT GAGCG-GGCCG          TCGTTTTCAGGAGCA  44 9
CXD79_RS16895 NONE
CXD79_RS16900 3488976 .. 3489010 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 207
CXD79_RS16920 3492478 .. 3492492 + -11.4  -3.57144   CACGGTGGCCAGCGC               CAGGGC CTC GCCCTG               TTTGCGCGTGCGCAC  71 267
CXD79_RS16930 3494877 .. 3494896 + -16.4  -3.75153   CCGCCCGATTGCCGA            CGCCGCGC GCAT GCGCGGCG             TTTCCATTGGCGCGC  88 81
CXD79_RS16950 3498258 .. 3498270 +  -3.3  -3.04792   ATTGATGCTGCGCAA                GCGCT CGT AGCGA                TATTAACCATCGTGA  42 16
CXD79_RS16955 3499236 .. 3499256 + -14.7  -2.52676   ATCCCAAATTTTCGG            CGTCCGCCA TGG TGGCGGGCG            TCCGTTAGCAAGATC  71 40
CXD79_RS16960 NONE
CXD79_RS16965 NONE
CXD79_RS16970 NONE
CXD79_RS16975 3502358 .. 3502396 + -12.2  -3.53012   GTGCCGCCCATCCTA   CGGTAGGGCGGGGACAGC CCG GCTGAACCCGCCAAGCCG   TTTCAACAGGAAAGC  74 67
CXD79_RS16980 NONE
        atpD NONE
CXD79_RS16990 3505228 .. 3505255 + -18.6  -2.91924   CCGCCGCGTCAGGCA        GACAAAGGCGAC TTCG GTCGCCTTTGTC         GTTTCTGGCGCATCC  89 58
CXD79_RS16995 3506311 .. 3506340 +  -2.2  -3.09581   CCAGGGCAGTAAAAT       CACGGCT-TCC GATCACCAA GGATAGTCGTG       TCTGTTGCCCCTTTG  42 74
CXD79_RS17000 3507606 .. 3507623 +  -4.1  -3.60048   GGCACGACCCTGAAA             GCTCACA CCCT TGTTAGC              GTTTTTTCCCCAAAG  51 217
CXD79_RS17005 3509825 .. 3509851 +  -5.7  -2.62184   CGCTGGAGATCTGAG        CGGGGCCG-GCG CCGG CGCTCGAACCCG         TACTCTGACCGAACA  44 27
CXD79_RS17010 3511970 .. 3511980 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS17015 3513048 .. 3513089 +  -8.5  -3.14132   GGCGTTGCGGAGGGG GGAACAAGGTGCCTGTCCC CACG GGGACAGGCACCCACGCCC  TTGGTGCAGGGACAG  56 89
CXD79_RS17065 3524198 .. 3524210 +  -9.1  -3.33696   GGCGCGGTCGGCCTG                GCGCA GCA TGCGC                TTGCTTACGCGCAGC  59 219
CXD79_RS17080 3526593 .. 3526607 +  -2.7  -4.21607   CGCATCTGACGCCGC               GCGGG CCCAT CCCAC               TTTATATTCCCTCGA  63 32
CXD79_RS17085 3527775 .. 3527789 +  -3.4  -3.78934   CCCTCAAGGCGTACG               CGTAGC GCA GCCGCG               TTGTTGTGCGCGCCG  56 21
CXD79_RS17100 3531212 .. 3531225 +  -2.3  -3.07935   GGTACAATGTCGCCT               CTTCG CGCC CGTAG                TTCAATGGATAGAAT  41 184
CXD79_RS17105 3531276 .. 3531291 +  -4.6  -3.53224   ATACAGGTTCGATTC              CTGTCG GGCG CGCCAG               TTTCCCAAGGCCCTA  52 11
CXD79_RS17110 3532379 .. 3532389 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS17115 3533536 .. 3533558 +  -5.5  -3.15579   CTGCCCATGCGCCGT          GGCG-GCGTC GGCC GGCGTGCGCC           TTGCTCCCCGGTTGC  49 168
CXD79_RS17120 NONE
CXD79_RS17125 NONE
CXD79_RS17130 3537071 .. 3537107 + -10.9  -3.15544   CGGGCCACTGCGCCT   GGGCGGCGCAGTCGCGC ACGAA GC-CGA-TGCGCCGCGC   TTCGTCGGCGTCGAA  64 217
CXD79_RS17150 3540455 .. 3540507 + -27.1  -3.02144   CTGGGCCGCGCCCAA CGCCGGCTGAAGCACGGCGG-CGC GGGCTG GCGGCCGCCGCGCTTCAGGCGGCG TCTTCGAGCGCCTGG 100 16
CXD79_RS17165 NONE
CXD79_RS17170 3545037 .. 3545066 + -11.3  -2.62263   CGGACCTGTTTCCCG       ACGCCGGCCAGCG GGTG CGCTGGATGGCGC        TGGTGTCGGCGACGT  59 509
CXD79_RS17180 3547332 .. 3547384 +  -9.2  -3.04501   GCGGTATTCGGGCTT GCC-C-TGCAGTAGCAGCCGCACGCG CACGC CGCGCGCGGCGGC--CTGCATGAGGC TCTTGCGGAATTGAT  55 403
CXD79_RS17235 NONE
CXD79_RS17240 NONE
        lptC NONE
        lptA NONE
        lptB 3562798 .. 3562813 +  -3.2  -3.66288   TCAAACGTACACAAT              CTTGCG CTAG CGCAAC               TTGTATTGGCCAATA  53 108
CXD79_RS17265 NONE
CXD79_RS17270 3565069 .. 3565081 +  -4.7  -2.71144   CACGTCCAGCGGCGT                GACCG CGC CGGCC                TGGTTGCCCCAGCTG  43 127
        rapZ NONE
CXD79_RS17290 3569092 .. 3569102 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS17295 3570522 .. 3570556 +   -10  -3.41229   CCGGTTGCGCCGGGT    CCTGCTGCGCCTCGC CGCTGA GCGA-GCGCGCCAGG     TTCTGCTCGAACTAT  65 441
CXD79_RS17355 3581521 .. 3581542 +  -7.3  -4.61873   CCACCAAGAATTCGA           TGCCCAG CCCTTGCA CTGGGCA            TTTTCATTTGTGCGC  79 35
CXD79_RS17405 NONE
CXD79_RS17410 3597003 .. 3597058 +  -7.4  -4.18197   CGTCCAGCGTGATTT CCACGATGGCCGTCAGCGTGCTGCCCA CCT TGGCCGGCGCGACGATGGCCACC-TGC TTTTCGATCACGCCT  73 304
        glmS 3599521 .. 3599559 +  -8.1  -2.56715   GCAGGCGGGCGATAT  CCATCGG-CGCG-CGCTGC ACG GCCTTGTCGCGCCCGATGG  TGCATTCGTCCAGGT  48 330
CXD79_RS17440 NONE
CXD79_RS17445 3605759 .. 3605813 + -20.2  -2.50779   TGACAGTAGGCGGCC CAGGCTGGCGCGCATGCGTCGCGGCAA GGCC TTGCCGCGACGC--GC-CGCCGGCATG CTGTTGGCTTGTCAT  95 38
CXD79_RS17450 3607262 .. 3607273 +  -7.2  -3.51934   ACCACATCGACCGCC                GCGC TCCA GCGC                 TCTTTCTGCAGGGGC  58 449
CXD79_RS17460 NONE
CXD79_RS17465 NONE
CXD79_RS17470 NONE
        argE 3611902 .. 3611951 +    -2  -3.50133   GGTAGTGGTGATGTA CCCCCCCGTCACGAACGCCGGGCT TTCG GGTCCGG--TCCATGACGGTGGCG CTTTTTCTACAACTA  48 74
CXD79_RS17480 3613012 .. 3613036 +   -20   -3.3514   ATCGACTGATCGCGG          CGGGCGCCCG CGGCC CGGGCGCCCG          TTGTGCCGTGTCGGT 100 32
CXD79_RS17485 3614353 .. 3614370 +  -5.5  -2.71712   CAGAAGAACATCATT             TCCAAGG CCAT CCTGGGA              CTTTGAGCGAGAGGC  45 2
CXD79_RS17490 3615662 .. 3615681 +  -3.4  -3.65812   TCAGTTCGGGCTTGG            CGTCGTAC AGGT GGCCGACG             TTGTGTTCGGCGGGG  51 167
CXD79_RS17505 3619595 .. 3619605 +  -8.2  -3.35813   TCGGCAACTTCTTCG                 GCGC CGA GCGC                 TTCGTTCCCATCACC  60 176
CXD79_RS17515 NONE
CXD79_RS17520 3621301 .. 3621335 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS17535 3624704 .. 3624738 +  -8.5  -2.71364   CCGCGTAGAGCTCGC    GGCTGATCACGCC-CC GGGT GGCGGCGTGCTCGGCG     TACTTGGCGCCCTGC  52 504
CXD79_RS17585 NONE
CXD79_RS17590 NONE
CXD79_RS17595 3636462 .. 3636478 + -15.1  -5.75945   TTCCGTTTTCCTCCT              GCCGCGC TCT GCGCGGC              TTTTTTTTGGGGCGT 100 55
CXD79_RS17600 NONE
CXD79_RS17605 NONE
CXD79_RS17610 NONE
CXD79_RS17615 NONE
CXD79_RS17620 NONE
CXD79_RS17625 3643350 .. 3643386 +  -9.9  -3.69395   GGGCAGCGGCCGCCG    CAGCACGGTGGCCGGCG CGG CGCTGGCCAACGCGGCG    TTGTTCCATGGTCGA  70 303
CXD79_RS17635 NONE
CXD79_RS17640 NONE
CXD79_RS17645 NONE
CXD79_RS17650 NONE
        lpdA NONE
CXD79_RS17660 3651480 .. 3651501 +  -4.3   -2.5474   GGCCTGCGCCAGCAG           CC-GTTCGGC GTT GCCGTGCAGG           ATCTTCTCCATCGCG  42 103
CXD79_RS17680 3656108 .. 3656141 +  -7.3  -3.65902   GTCAGCGGGTGCCTG     TCCCCCGTGCGGG GACAGGCA CCCGGGTGGGGGG      TTTACATGCGCTCGA  61 50
CXD79_RS17690 NONE
CXD79_RS17695 3658434 .. 3658472 +   -11  -3.20723   TGCCCGCTGCCGATG  ATGC-CCACCAGCGGCG CGAACA CGCCGGTGGTGGCGCAG   TTGAGTTCCTCGACA  64 224
CXD79_RS17720 NONE
        grxC NONE
        secB NONE
CXD79_RS17735 NONE
CXD79_RS17740 3666657 .. 3666694 + -13.3  -2.79183   CGCGAAGATGCGCGG   CGCAGCCGC-GCCGGTGG CCG CCAGCGCCTGCGGCAGCG   TGTCGTGCACCTGCA  67 293
CXD79_RS17755 3668846 .. 3668858 +  -9.1  -4.09685   GGTGTCCTGGACGCC                CTGGC CGC GCCAG                TTTTGCGCCATGGAC  72 173
CXD79_RS17810 NONE
CXD79_RS17815 NONE
CXD79_RS17820 NONE
CXD79_RS17825 3684699 .. 3684749 +  -8.1  -4.32857   GAGGACGGGCTCCCA GGGTTCGGCAGGTGCCTGTCTCC CGTGC GGGGACAGGCACCTGAGTGTCAC TTTGTCTTTGCCAGC  77 49
CXD79_RS17860 3691113 .. 3691140 +  -6.2  -3.17714   GCGGCTGTACTGATT        GTTGGCGTCGAC CAGC GTCGACAGCAGC         TTCATGAAGATTTCG  50 69
CXD79_RS17900 3700565 .. 3700577 +  -7.7  -3.61398   CAGCGCGATCGTGCC                CGTCA GGT TGACG                TTCTTGGGAAACCGG  60 299
CXD79_RS17910 NONE
CXD79_RS17915 NONE
CXD79_RS17920 3703215 .. 3703225 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS17930 NONE
CXD79_RS17940 NONE
CXD79_RS17945 3706481 .. 3706523 + -14.2  -3.33696   CATGAAGCACTGATG CGGTACG--GGGCGG-CGGCC CGCA GGCCGTCCGCCCCGCGCACCG TTCATTCCAGGCGGA  75 28
CXD79_RS17960 3709852 .. 3709876 + -14.9  -2.90075   CGCCGGTATCGATTT          CGCTGGCGGCC TGA GGCCGCCGGCA          TATGGTTCGAACGCC  73 12
CXD79_RS17965 3711434 .. 3711448 +  -2.7  -3.72576   AGGCCTGGCCGGACA               GCGGC AACGG GCCGA               TTTCCTGCAGCAAGG  53 464
        kynU NONE
CXD79_RS17995 NONE
CXD79_RS18000 NONE
CXD79_RS18005 3717443 .. 3717470 +  -3.2  -3.54424   CCCGTTCTTGATGTC        CGCGGC-GCGCGC GCC GCGCCCTGACCCG        TTTCCGACCGTCCCA  49 49
CXD79_RS18010 3718691 .. 3718705 +    -7  -2.62983   CGAAGCGCGCCAGCA               GCGCCG GTT CGACGC               TGATCTCGGCCTGCC  48 293
CXD79_RS18035 3721700 .. 3721727 + -19.2  -3.02324   GCGCCGTGTTGATTC        GGTGCCTGTCCC GACA GGGACGGGCACC         TGTGCTTTCGATCAG 100 57
CXD79_RS18050 3724874 .. 3724915 +  -6.5  -3.11634   CCGGCCGAATCGCTG TCGGTGCCGGTG-AGCGATC TGT GATCGGTGCGCCTGCACGGG TTCCGTCATCTGGGG  51 2
CXD79_RS18055 3726061 .. 3726111 + -18.9   -3.6579   GAGCGATCGACAGGG CGGCGGCGCCTGGCCGATGGCAGC CGGC GCCGCCGCCGGCCAGGCGG-GCTG TTGTTAGAATCCCTT  95 39
CXD79_RS18060 3726972 .. 3727006 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS18075 NONE
        rocF 3730152 .. 3730162 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 80
CXD79_RS18085 3731321 .. 3731335 +    -7  -3.41693   GCCCGATTTGGCGTA               GCCGGC CAC GCCCGC               TTCGTTCATGGTGGG  58 180
CXD79_RS18150 3747092 .. 3747118 +  -2.1  -3.61178   CCCTGGCTGCAGGCG         TTCCGGCCTGC CGTCC GCTGACCCGAA         TTTCCGATCCATCCG  48 5
CXD79_RS18155 3748330 .. 3748344 +  -2.7  -4.07568   GCAATACGCTATGCT               CGACG CGCGC CGCCG               TTTTCGCCGGCGCAG  59 70
CXD79_RS18160 3748785 .. 3748809 +   -15  -4.57073   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG 100 49
CXD79_RS18175 3751272 .. 3751282 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 71
CXD79_RS18180 3752275 .. 3752320 +    -6  -2.89564   TACAACCTATTGACA GTTCACACCTAACCCCCACC CGCCCC GGTAGGGGCTAGGAGATAAC TGTGTCCGATACCAA  48 14
CXD79_RS18185 3752878 .. 3752888 +  -2.4  -3.39895   GTGCAGGTAATGGCC                 CAGC TCG GCGG                 TTCGTTCATGAAGCA  46 114
CXD79_RS18195 NONE
CXD79_RS18200 NONE
CXD79_RS18205 NONE
CXD79_RS18210 3755221 .. 3755235 + -12.8  -3.02511   CCGCCTGATCTCCCT               GGGCGG CGC CCGCCC               TATTACCCACGTAGC  67 33
CXD79_RS18215 NONE
CXD79_RS18220 NONE
CXD79_RS18225 NONE
CXD79_RS18230 NONE
CXD79_RS18235 3758065 .. 3758075 +  -8.2  -3.54424   CAGCAGCTCGCCTGA                 CCGC ATG GCGG                 TTTCGAGGGATAGCA  63 406
CXD79_RS18255 3763071 .. 3763099 +  -4.4  -3.44622   ACTTCGACCGATTCC        CCGCGCTGGTTG GTCAG CGGCCAGCGCAC        TTCGTTCTGCGGGTC  49 329
CXD79_RS18270 3765301 .. 3765320 + -16.4    -3.767   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC  91 219
        dnaA NONE
CXD79_RS18300 3770931 .. 3770944 +  -2.3  -5.03145   CGCGCGCGAACGGTG               TGGCC GTGA GGCTG                TTTTTTAAGGCGTTA  79 81
        gyrB 3773451 .. 3773472 + -13.7   -4.4078   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG 100 53
CXD79_RS18315 NONE
CXD79_RS18320 3777234 .. 3777288 +  -6.3  -3.76759   CCTGCAGGCGTGCGC GAGGGGCGGCGTAT-ACTGGCTCTCGC CGC GCGAAGGCCGGCCAT-CGCCGTGCCGC TTTCCTGACCTTCAT  62 369
CXD79_RS18330 3778526 .. 3778576 +  -6.3  -3.44848   GCAAAATCTGCAAAG CGGG-CTT-GGCTACATTGCGTTC ACTGGA GATCGCA-TGAAGCCCAAGACCCG TCTTTACTACGCCGA  55 79
CXD79_RS18335 3779420 .. 3779433 +  -9.5  -3.26471   GCGTTGCAGGCCCGC               CCGGG CCGG CCCGG                TTACTATGGCCGTAG  61 40
CXD79_RS18345 3781891 .. 3781930 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD79_RS18350 3783423 .. 3783458 +  -5.6  -3.09681   ATGATGCAGTGCAAA    TATTACGTTTACGT AAACGTAA ACGTAAACGTAAAG     TTGAGTCGGGTTTTC  49 487
CXD79_RS18365 3785222 .. 3785256 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 218
CXD79_RS18385 3790146 .. 3790159 +  -3.1  -2.79796   CATCAACGCCCCACG               GGTAT GCCC ATGCC                TATCATCGAATCCCG  40 117
CXD79_RS18390 NONE
CXD79_RS18395 3793826 .. 3793864 +  -6.7  -3.14931   CGCTGATCGAAGTGA  AG-TGA-ATGACGCCGGGC GCG GCCCGGCGTCGGGTCAGCC  TTGCTCCGGCGTGAC  52 21
CXD79_RS18410 3796632 .. 3796669 +    -9  -2.70932   TGCCCAGCGCCGGCG   CGGGCGCGCCG-GGCTC CACCC GCGCCACGCCGTGCTCG   TCGTTGGCGGCGAGA  52 188
CXD79_RS18420 3798850 .. 3798862 +  -6.2  -2.64155   CGTCCCGACTCCAAT                GCGC CAATC GCGC                TGCCTTTCCGCCAGG  46 70
CXD79_RS18425 3800987 .. 3801016 + -20.9  -3.29144   CGGGCGCCGACGCAA       TGCACAACCCACC GCAA GGTGGGTTGTGCA        TTCTGGACGCGGTCG 100 59
CXD79_RS18430 3803455 .. 3803474 +  -3.4  -4.07568   GAAAACGTGAAGACC            GCGCGCAG CGCA CTGCCCCC             TTTTACAGAGCCGCG  59 87
CXD79_RS18435 3804144 .. 3804179 + -16.8  -2.70525   GATGCGGCCGCGCCA    GACATGGCGCGCCGGC CCGT GCTGGCGCGCCATCGC     ATTGATTTCCGGAAC  80 39
CXD79_RS18450 3810447 .. 3810469 +  -5.4  -3.50853   GCACCGCGCGGTCCA           CGCGACCGAC GCG GCCAGTTGCG           TTATCGTTGCCGCAA  54 102
CXD79_RS18455 3811571 .. 3811581 +  -8.2  -2.82635   GCGATTCGTGCGCAA                 GGCC CGG GGCC                 TGTGATGATCGAGCT  54 10
CXD79_RS18460 NONE
CXD79_RS18465 NONE
CXD79_RS18470 3813998 .. 3814019 +  -3.5  -3.64822   AGTTCTGAGCTTGCC           CGACCCGCG AGGC TGCGCGCCG            TTTCCCTGCAGGACT  54 33
CXD79_RS18475 NONE
CXD79_RS18480 3816725 .. 3816772 +  -2.7  -3.02511   TGGCGGTGGACAACT CC-TGGATGTTCATCAGCACCGA CGCG TCGCCGCTGACGCACA-CCACGG TCTTGCCGGGATGCG  41 467
CXD79_RS18490 3818871 .. 3818887 +  -5.7  -3.28712   GATCGCGCGCCAGCG              CGGCCAG CGG CAGGTCG              TTCTCGGCCAGGCCG  52 137
CXD79_RS18500 3820577 .. 3820607 +  -8.9  -3.21063   TGTGCCGGCACTTTC      CCGC-CAGACGGGC GCTC GCGCGCCTGCGCGG       TATTGCGTTTGGCTG  56 299
CXD79_RS18505 3821614 .. 3821624 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 270
CXD79_RS18515 3822665 .. 3822713 +  -9.7  -3.03159   CGGCGCACGTCCTCT TCGGCG-CGGCC-GCTGCGCGCCAC GTA GTCG-GC-CAGCTGGTCGGCGCCGA TGTTGCCCACGTTGA  59 62
CXD79_RS18525 NONE
CXD79_RS18530 3829536 .. 3829558 +  -8.4  -4.05714   CGCGGCTGAGCCCGC          GC-CGCCGG CCAGCC CCGGCGTGC           TTTATCATTGGCCCT  72 32
CXD79_RS18535 NONE
        thiD 3831320 .. 3831330 +  -3.2  -4.21462   GTTGACTCCCCTATA                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  63 67
CXD79_RS18545 NONE
CXD79_RS18550 NONE
CXD79_RS18555 3833564 .. 3833604 +  -6.8  -3.05268   CGTGAAAAGAAGTCA CCGCGTCGACGCAGC CCAGGGCCGCCA GCAGCG-CGGCGCGG  TCTTGCACCTGATTG  48 246
CXD79_RS18565 3835222 .. 3835235 +  -3.7  -2.87132   GCGCCCTGCGACCCG               GGCGC GCCC GCGCA                TCTGTAACAGGGACG  43 97
CXD79_RS18570 NONE
CXD79_RS18575 3837363 .. 3837394 +  -4.4  -3.72576   CAGGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  55 92
CXD79_RS18580 3838774 .. 3838808 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD79_RS18595 NONE
CXD79_RS18600 NONE
        fusA NONE
         tuf 3844727 .. 3844752 + -11.1  -4.62203   AGCAGTACCCAACCA         GTGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CXD79_RS18615 3845124 .. 3845163 + -20.2  -3.53091   TGTGGCGCAGCTCGT  GAAAAATGGCCGCATTCC CCCG GGAGTGCGGCCATTTTGC   TTTGGCGCGACAGCT 100 63
CXD79_RS18620 NONE
CXD79_RS18625 NONE
CXD79_RS18630 NONE
CXD79_RS18635 NONE
CXD79_RS18640 NONE
CXD79_RS18645 NONE
CXD79_RS18650 NONE
CXD79_RS18655 NONE
CXD79_RS18660 NONE
CXD79_RS18665 3850247 .. 3850269 + -17.8  -5.84381   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG 100 70
CXD79_RS18685 NONE
CXD79_RS18690 3854344 .. 3854355 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAGTT  44 31
CXD79_RS18695 NONE
CXD79_RS18700 NONE
CXD79_RS18705 NONE
CXD79_RS18710 NONE
CXD79_RS18715 NONE
CXD79_RS18720 NONE
CXD79_RS18725 NONE
CXD79_RS18730 NONE
        secY NONE
CXD79_RS18740 NONE
CXD79_RS18745 3859440 .. 3859459 +  -2.8  -3.08812   GCGTCAAGGCTAACC            CAGTTAGCG GTA CGC-AACGG            ATTTATTCAAGGAAC  44 28
CXD79_RS18750 NONE
CXD79_RS18755 3860239 .. 3860254 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  44 3
CXD79_RS18760 3860969 .. 3860998 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  78 98
CXD79_RS18765 3862107 .. 3862135 + -21.7  -2.84218   CCGTAAGCAGTCAAG        CGCGGTGGGCGCG CCA TGCGCCCGCCGCG        ATGTTTTCATGCATC 100 35
CXD79_RS18770 3862672 .. 3862701 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCGCGCG 100 46
CXD79_RS18780 NONE
        dsbD 3865534 .. 3865587 +  -3.1  -3.04144   GCTCCTGACGTTGCT TCGTATC-GCCTCGGGCGCGC-CCG AGGCGA TGGCGTGGGCGAGAGGCTGGTACGA TGTTGCCCATACCAG  42 33
CXD79_RS18790 3866786 .. 3866796 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGGCGC  52 207
CXD79_RS18805 3869249 .. 3869275 +  -6.4  -5.14563   CCGTTGTCTATGAGG         GGGGGGAAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAACGC  90 112
CXD79_RS18810 NONE
        ccsB 3872739 .. 3872768 + -22.3  -3.54459   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 44
        cyaY 3875111 .. 3875164 + -17.3  -2.80816   CGACGTCGCTGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCACGCAGCA TATCGTCCATGACGA  78 513
CXD79_RS18840 NONE
CXD79_RS18845 NONE
CXD79_RS18850 3880195 .. 3880250 + -14.6  -5.14965   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCCGGCGGA TTTTTTCGTCCGCGT 100 120
CXD79_RS18865 3885304 .. 3885322 +   -16  -3.44848   GCTTCACCCAGTATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  82 142
         ssb 3885952 .. 3885967 + -10.4  -5.78622   CGCTGGATGCGAAAG              CCCTGC CCAG GCAGGG               TTTTTTTTCGCCTGG 100 57
CXD79_RS18875 NONE
CXD79_RS18880 3888793 .. 3888805 +  -4.8  -3.32844   GGGCTGGGCCGGGCC                GCGA TCGAT TCGC                TTATCCGCTGACCGC  49 2
CXD79_RS18885 NONE
CXD79_RS18890 NONE
CXD79_RS18895 NONE
CXD79_RS18900 3891675 .. 3891717 +  -7.4  -2.79796   GCCAGCATATGGGGC ACCTGCACCGCCACGTCGCG CGT CACGCCCAGGCGTTGCAGGG TGTCCTGCAATACGC  49 284
CXD79_RS18910 NONE
CXD79_RS18915 3895261 .. 3895291 +  -3.2  -2.63301   GGATCTTTCCTGCCA       GCAGTGTGTCTATG TAC TACATTCACACTGC       TACTCTCAGAATGTC  39 137
CXD79_RS18920 NONE
CXD79_RS18925 3897306 .. 3897329 + -17.4  -3.28712   GCCCCGCAGCGGGGC          GCGGCTGGCC GCAA GGCCGGCCGC           TTGTCGCCCGCACGC  86 59
CXD79_RS18930 NONE
CXD79_RS18935 3899448 .. 3899471 + -17.4  -3.97331   GACACGATTGTCCTG          CCGGCGGGCG AGGC TGCCCGCCGG           TTCTTTGCCTGGATT  95 44
CXD79_RS18940 NONE
CXD79_RS18945 NONE
CXD79_RS18950 3902645 .. 3902662 +  -9.9  -3.72576   TCATGATTTCCTCTT             TTCGCAC GGAC GTGCGAA              TTTAATCGAAAAAAA  71 284
CXD79_RS18995 3911213 .. 3911228 +  -4.6  -2.53382   CCGCCGATTGACAAG              CCTGGC CGGC GCTGGG               TAGATTGCGCCTACT  42 30
CXD79_RS19000 3912337 .. 3912375 + -10.9  -3.73224   AGCGGGCGCATACCT  CGCTTGAAGGCGGCGGCC GCAT GGCCGCCGTCG-CAGGGG   TTTCGTACCCCATCG  73 39
CXD79_RS19035 3917279 .. 3917298 +  -4.8  -3.35679   CCTGGCCGAAGGAGC            GGCCTGAG GCGC CGCCGGCC             TTCTCCATCCACGAA  51 19
CXD79_RS19045 NONE
CXD79_RS19050 3920438 .. 3920477 + -13.5  -2.78715   ACTGAGGCTGCGCGA TCGCCC-GC-CCGCCGCGC GTGC GCGCGGCGCCGCTGGGCGC  TATAATGCGCAACTT  67 36
CXD79_RS19055 3921051 .. 3921078 +  -8.4  -3.06831   AGACCTCCTCGAGTG        GCGCCG-TGGTGT CGA ACGCCATCCGCGC        TTGCGTGAACGTTGA  55 477
CXD79_RS19070 3923051 .. 3923082 +   -13  -2.89668   CATCCCCGACCAGCT      GACCGACTGAGCGC CGGC GCGCTCAGTCCATC       TGTATCCCGCTCTTG  69 16
CXD79_RS19125 3934746 .. 3934758 +  -5.5  -3.55622   ACCTCGCGGTGCACC                GCGTC CTC GATGC                TTTCGCCGACTTCGA  54 315
CXD79_RS19150 3939646 .. 3939658 +  -6.9   -3.7456   GCCCGAGAACGTGGC                CGGCG GCT TGCCG                TATTTCTTGGTGTAG  61 272
CXD79_RS19195 3949021 .. 3949036 + -10.4  -2.57132   TCGCCGGCAGCAAAC              TGCCGC TGGC GCGGCA               ATTCTAGGCGGCGGG  57 3
CXD79_RS19200 3950085 .. 3950095 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS19205 3951279 .. 3951298 +  -5.6  -3.90112   CACGGCGCACAGGAC            GCCGCGGCC GTC GGCCA-GGC            TTTCCTTCAGGCCGC  60 205
CXD79_RS19240 3958535 .. 3958558 +  -9.4   -3.1372   AGGCCTTGATGTCGT          GCGCCAGCGC TTCG GCGCCGGCGG           TATTGGTGGCCAGTA  59 220
CXD79_RS19270 3962786 .. 3962803 + -12.7  -3.21218   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  69 86
CXD79_RS19300 3968241 .. 3968283 +   -14  -3.23853   CGCCGGCGCCGAATC CTCCGAGGCCGTGCTGGCGG CGG CCGCCGCCGCGGCTTGCGAG TATTGCTTCCACACC  75 147
CXD79_RS19310 3972128 .. 3972175 +  -6.1  -4.63218   GCGGTCTGTCTTGCA TGCGCGG-GCGCCG-CGTACGGC GTCA GGCGGGGGTCAGCGCACCGCGCA TTTTCTTCAGCGCCG  78 397
CXD79_RS19335 3976864 .. 3976893 +   -15  -4.25104   CGGGGCGTTGCATGC       TGCCCACCCGGC CCCTGT GCCGCGTGGGCA        TTTTGCTGCGCCCGC  95 55
CXD79_RS19340 NONE
CXD79_RS19345 3983469 .. 3983481 +  -9.1  -3.18264   GCCTGTCCCCGCGGG                GACGG ATA CCGTC                TTAGTACGTACGGCA  59 101
CXD79_RS19350 3984303 .. 3984317 +  -7.8  -3.28712   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTGAGGCGCCCGC  56 5
CXD79_RS19355 NONE
CXD79_RS19360 NONE
        mlaE NONE
        mlaD NONE
CXD79_RS19375 3988591 .. 3988609 +  -5.2  -4.72386   GGCCACCGCCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  81 45
CXD79_RS19380 3989388 .. 3989399 +  -5.8  -4.07568   AGCCGCGCCGGCGCG                GCTG GAAG CAGC                 TTTTCGGCCAGCCGG  64 185
CXD79_RS19390 NONE
CXD79_RS19395 NONE
        murA NONE
CXD79_RS19405 3993151 .. 3993172 + -18.7  -2.61274   CATCGCCTGAACCCC           GCCGCCCGC GCCG GCGGGCGGC            CTTCCTTGCAGTACC  87 31
        hisD NONE
CXD79_RS19415 NONE
        hisB 3996161 .. 3996175 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCG  42 3
        hisH 3996906 .. 3996918 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  57 39
CXD79_RS19430 NONE
        hisF NONE
        hisI NONE
CXD79_RS19445 NONE
CXD79_RS19450 3999612 .. 3999627 +  -2.4  -2.90496   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAATTTCGGAGAACC  40 7
        tatA 3999884 .. 3999909 + -12.6    -3.889   CCTAGTCCCGGCCCG         GGACCGGC-CC ATGAC GGCGCCGGTCC         TTTCCTATCGTTCCA  81 36
        tatB NONE
        tatC 4001226 .. 4001251 +  -5.3  -2.52676   AAGTAGACGGTTTCA         CGCTTGCCGCGG CCG CC-CGGCATGCC         TACATTGCCGGCATG  44 65
CXD79_RS19470 4001767 .. 4001781 +  -4.2  -2.82327   TTCGCATACCAAATC               CTTGCC GGC GCCAAG               ATTTCAGTATGAGAA  43 43
CXD79_RS19475 4002990 .. 4003033 + -11.6  -2.52516   CCGTCCGGCCGGCAC CATCCCGCATACGTGTTGGC AACC GCCAACGCGCATGCGTGCAG ATTCGTCGTACAAAA  61 67
CXD79_RS19480 NONE
CXD79_RS19485 NONE
CXD79_RS19490 NONE
CXD79_RS19495 4005573 .. 4005583 +  -3.2  -3.63968   ATATTGCGAATGAAC                 CCTT CCG GAGG                 TTTCGACGTTTCCGC  53 28
CXD79_RS19500 4006332 .. 4006350 +    -3  -3.09785   CGGCAGCGTCGATAT             GTTGAGCC GCC GGCTCGGA             TCTGTTCGCCTGTCC  44 21
CXD79_RS19505 NONE
CXD79_RS19510 NONE
CXD79_RS19515 NONE
CXD79_RS19520 NONE
CXD79_RS19525 NONE
CXD79_RS19530 NONE
       virB9 NONE
CXD79_RS19540 NONE
      virB11 4014715 .. 4014725 +  -2.4  -4.29396   ACGCCTGCCGCCTGC                 ACGC ATT GCGA                 TTTTCGTGCATAATT  62 40
CXD79_RS19550 4014844 .. 4014865 + -15.9   -4.7497   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC 100 37
CXD79_RS19560 NONE
CXD79_RS19565 NONE
CXD79_RS19570 NONE
CXD79_RS19575 4020235 .. 4020267 +  -5.4  -3.02043   ATGTGCCTGCTTGCT      TTGCGCACCGGCGT CCATC GCGCCGCGCCGCAA      TCTTCCCACCGCCTT  47 209
CXD79_RS19580 NONE
CXD79_RS19585 NONE
CXD79_RS19590 4024026 .. 4024059 +  -5.2  -3.71873   CGCATCGAATTCCCG    AGCCGGCG-CGG-CAC GCTG GTGGCCGTCGACGGCG     TTTCGCTGTCGCTGG  57 75
        argJ NONE
CXD79_RS19610 NONE
CXD79_RS19615 4028730 .. 4028749 +    -2  -2.89475   GGATCCGCGGGCTGC            TCTGACGC AACG GCGCTAGG             TGTGATGTCTCAATA  40 21
CXD79_RS19620 4029820 .. 4029830 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD79_RS19625 4031008 .. 4031029 +  -3.7  -2.70932   CGCCACGCTCAGGTA           GT-CGATCAG CCC CTGCTCGTAC           TGGTTGCGCGCCAGG  40 199
CXD79_RS19665 NONE
CXD79_RS19690 NONE
        glpK 4048889 .. 4048925 +  -2.2  -3.53811   CACGCCGGCGCGCCG   GCCGCGGGGCTG-GCC AGCTGGC GGCGCAGCACCA-GGC   TTTGCGCGCCATGCA  50 138
CXD79_RS19730 4055607 .. 4055623 +  -2.2  -2.70932   CACGACACGCACGGA              GGCC AAGCATGAA GGCC              TGGTTGCGACAACAC  38 14
CXD79_RS19735 4056514 .. 4056527 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4057637 .. 4057682 +  -6.2  -3.18264   CGGCGTGCTCCAGGT TGCCGCGGTTCAGCTTGGGC AGGATCGC GCCCA-GCTGC-TCGCGGTA TTGCTCGATCAGCGC  51 280
        mutY 4062380 .. 4062390 +  -3.2  -3.28924   CCAGCCTGAAGGTGA                 TCTG CTG CAGG                 TTCTGCCGCCCGCTG  47 95
CXD79_RS19760 4064112 .. 4064122 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 144
CXD79_RS19765 NONE
CXD79_RS19770 NONE
CXD79_RS19775 NONE
CXD79_RS19780 NONE
CXD79_RS19785 NONE
CXD79_RS19790 NONE
CXD79_RS19795 4071240 .. 4071259 + -16.4  -6.06723   GGCCGAGCGTGCACG            CCGCCCCG CAAC CGGGGCGG             TTTTTTTTTCGCGCG 100 57
CXD79_RS19805 NONE
CXD79_RS19810 4073960 .. 4073985 +  -5.9  -3.61652   GACGGAAAGGCGATG         CCGGCGTCCGG CTGG CCCGCCGCCGA          TTGATTGTTTACGCA  56 53
CXD79_RS19815 4075436 .. 4075456 +  -2.4  -2.78712   AGACCAAGCCCTATC            CCAGCGAG CCATT CACGCTGA            TCGTTCCGTTCGGCG  38 209
CXD79_RS19830 4078419 .. 4078438 +  -2.8  -4.07568   GCACCGTCACGCGCT            CCAGCGTGT CGA ACAC-CAGG            TTTTCCACAGCCAGG  58 124
        mnmE 4090853 .. 4090871 +  -6.7  -2.62184   CCGCGCCGGCGATGC            GGCC-CAC GATC GTGCGGCC             TGCTATCGCGCAGCC  47 398
CXD79_RS19895 4092961 .. 4092974 +  -2.3  -3.29947   AAACCCGCCATCGCA               CGCTG AAGA CGGTG                TTGCTGTGGTGGCTG  44 49
CXD79_RS19900 4094436 .. 4094450 +  -5.7  -3.06183   TCATCCGTTGGCCTG               CGATC TGCGC GATCG               TTCCATGGCCATCCA  47 74
CXD79_RS19905 4095519 .. 4095551 + -18.4  -3.02144   AAGAAGTAAACCGAT     CGCGCGGCCGGCGGC ATGC GCCGCCG-CCGCGCA      TCTTCCCAACGGTGC  90 32
CXD79_RS19910 NONE
CXD79_RS19915 4097595 .. 4097616 + -15.9  -5.06414   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 46
CXD79_RS19925 4099425 .. 4099436 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CXD79_RS19920 4097595 .. 4097616 - -15.9  -4.65895   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 59
CXD79_RS19890 4090133 .. 4090147 -  -5.7  -4.15788   AACGTCTTCAACAAA               GTCGA TCTGC TCGAC               GCGGCGTTCCAGGGC  69 303
CXD79_RS19880 NONE
CXD79_RS19875 NONE
CXD79_RS19870 NONE
CXD79_RS19865 NONE
CXD79_RS19860 4083460 .. 4083472 - -10.5  -2.78384   GTTTCTTTTAGCACA                GCGCG CGG CGCGC                TCAGGCCTGCTGCGC  57 26
CXD79_RS19855 4082091 .. 4082111 -    -9  -3.12999   GCATGGGACATGGAA            CCGCTCCT TGTTC AGGAGCGA            TCCATTATGAAAACG  59 130
CXD79_RS19850 4081170 .. 4081180 -  -8.2  -2.57344   GACGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTGCG  52 8
CXD79_RS19845 4080062 .. 4080075 -  -2.4  -2.86676   CCGAGGAATCGAAAC               GATG CGCGCC CATC                TCAGCTTCCCTGCGC  40 26
CXD79_RS19840 NONE
CXD79_RS19835 4078343 .. 4078372 - -22.9  -3.48593   GACGCCGCGACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       GGCGGCATTCAGCGC 100 34
CXD79_RS19825 4075557 .. 4075589 - -10.6  -4.17762   GATCGTGGAAAACAA     GGCTG-GCGCCAATG GCAT CATCGGCGCGCAGCA      TGCGAAGAAGGCGAC  89 235
CXD79_RS19800 4070856 .. 4070868 -  -9.1  -3.01791   ACGGCGTCCTGAACA                TCGCC CGC GGCGA                CCGGGTCCGGATGAA  55 446
CXD79_RS19755 4061937 .. 4061967 -  -5.2  -2.52896   CCATCCCCGAACGCA       GCACGGCCATGCTG GTG CTGCACGGCCCCGA       CGGCATCCTGCTGCA  42 379
CXD79_RS19725 4053508 .. 4053525 -  -2.5     -2.97   AAATCAATCTACAGA             GTCGGAC GTTC GGCCGGC              GCGGACGCGCCGGCC  41 112
CXD79_RS19720 NONE
CXD79_RS19715 NONE
CXD79_RS19710 4050363 .. 4050397 -  -2.7  -3.53811   GCGATCCGCCGGAAA    GCCCGGCGCCAGCG CCGTTTCC CGCCGCC-CCGGCC     CGCCGCCTCAGTGCA  49 33
CXD79_RS19705 NONE
CXD79_RS19700 4048449 .. 4048462 -  -8.1  -3.14132   GCTGTCGTGCATGAA               TGCCG ACAG CGGCA                TCCCGCTGTCCGAGC  53 358
CXD79_RS19685 4045476 .. 4045503 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  43 42
CXD79_RS19680 NONE
CXD79_RS19675 4043684 .. 4043699 -  -7.6  -2.57132   GCCTGCGCCGAGAAG              CTGTCA AATT TGACAG               GATCTGCCGCGGCCG  50 45
CXD79_RS19670 4043001 .. 4043051 -   -11  -2.50935   ACGCCACCCAGGAAC GCCCGCCCCGCGTGCTGCTGCT CGACGGC AGCGGCAACATGCGCGCCGAGC TGGTCATGACCGCCA  58 248
CXD79_RS19660 NONE
CXD79_RS19655 NONE
        zapD 4039795 .. 4039809 -  -5.6  -3.55071   CCAGACCGGCCCAAA               CTGGCA GTT TGCCGG               GCGCTGCTGAAATAG  54 137
        mdtA 4038476 .. 4038505 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  52 10
        mdtB 4035412 .. 4035434 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  42 16
CXD79_RS19635 NONE
CXD79_RS19630 4030631 .. 4030665 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS19600 4024223 .. 4024252 -  -9.9  -3.16191   CGACACCTTGAGCAA       CGCCGAGCAGCGCA AGG TGCGCGGC-CGCCG       CATCGGCATGATCTT  62 140
CXD79_RS19555 4014844 .. 4014865 - -15.9  -3.91144   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC  91 66
CXD79_RS19330 NONE
        fghA 3973911 .. 3973942 -  -4.3  -4.08706   CGCCCAGTATATAAA      GCGGCCCGGGC CCGGCCTGTT ACCCCAGCCGC       TCGACGTGAAACCGG  62 13
CXD79_RS19320 3973133 .. 3973152 -    -2  -3.53012   CTGCGCCGCGCCAAA            GTTCCGGA ATTT CCCAGTAC             GCAGGATATTTTTCT  48 54
        rpoH 3972101 .. 3972120 - -13.6  -5.40474   AGGCCCCCAAAAAAA            CAGACCGC CGTA GCGGTCTG             TCTTGCATGCGCGGG 100 55
CXD79_RS19305 3967806 .. 3967821 -  -8.2  -3.66666   GCGAAAACCTGGAAA              CCGCGC TGGT GCGCGA               ATGCGGCGAAGAAGC  63 427
        coxB 3965845 .. 3965877 - -13.4  -3.22858   CCAACTACAGGAACA     GCAGCGG-GGCGCGC TTCA GCGCGCCTCCACCAC      GTCCTTGGGTTGGAC  73 8
        ctaD NONE
CXD79_RS19285 NONE
CXD79_RS19280 NONE
CXD79_RS19275 3962786 .. 3962803 - -12.7  -3.33696   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  71 57
CXD79_RS19265 NONE
CXD79_RS19260 NONE
CXD79_RS19255 NONE
CXD79_RS19250 NONE
CXD79_RS19245 3958374 .. 3958400 -  -8.7  -2.87132   TTGGGCGTCCACAGA         TATCGGCCCCC CATGC GGGGACAGATA         CCGTCTTGGCAGTCA  54 137
CXD79_RS19235 3957246 .. 3957261 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CXD79_RS19230 3956389 .. 3956418 -  -2.6  -3.31322   GCGAAGGTTCGATAA       GCGCGACGATTC CAGGGC GTGCCGGCGCGC        TACGGCTTGTCCGCC  44 25
        glmU NONE
CXD79_RS19220 3953495 .. 3953526 - -10.8  -3.04322   TGCAACCTCGCAATA      CGCGGCGTCAGCGGA CCA TCCGCCG-CACTGCG      GGCATTATAGAAGTA  62 87
CXD79_RS19215 NONE
CXD79_RS19210 3950896 .. 3950930 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS19190 3947311 .. 3947321 -  -8.2  -5.15634   CACTCTAGGAAAAAA                 GCGC GGC GCGC                 GAAAATAATTAAAAC  95 203
CXD79_RS19185 3945870 .. 3945901 -  -8.6  -2.56596   TGGGTGACGAAGGGA      TGCGAGGGCCG-CCG TGG CGGCCGGCCCTCATT      CGGAGGTGGCGGTGC  52 21
CXD79_RS19180 NONE
CXD79_RS19175 NONE
CXD79_RS19170 NONE
CXD79_RS19165 NONE
CXD79_RS19160 NONE
CXD79_RS19155 3939035 .. 3939049 - -11.4  -3.90112   TGGCGGCCAAGGAAA               CGCTGG CCA CCAGCG               ACCTCAACACCGAGC  77 391
CXD79_RS19145 NONE
CXD79_RS19140 NONE
CXD79_RS19135 3935248 .. 3935259 -  -2.2  -3.18389   GGAAGATGAAAATCA                CGAA ACAC CTCG                 TTCATGCAGGCCCGG  42 95
CXD79_RS19130 3934365 .. 3934410 - -14.5  -3.70902   CGCGCGAGACCGAAA GCCCGGGTTTCCGGCAGCGCG TCGC CACGCAGCTGGCCACCCAGGC CACCCAGGCCATCCA  88 96
CXD79_RS19120 NONE
CXD79_RS19115 NONE
CXD79_RS19110 NONE
CXD79_RS19105 3929095 .. 3929108 -  -5.2  -3.10611   TTTACCCGAAGAAAC               GGGC CAGCAC GCCC                TGCCGCGGATGTCGG  49 382
CXD79_RS19100 NONE
CXD79_RS19095 NONE
CXD79_RS19090 NONE
CXD79_RS19085 3925334 .. 3925344 -  -8.2  -2.70932   CTCTGTCTGCAATGA                 GGGG GCG CCCC                 GGGTTCAGCGCCCGT  52 30
CXD79_RS19080 3924093 .. 3924108 -    -6  -2.55606   CTATATAGGATGAAT              GGGGTG CCTG CCCCCC               TGGGGACAGATACCG  46 163
CXD79_RS19075 3922927 .. 3922943 - -10.8  -3.19602   CGGGCTACACCAAGA              CGCCGC CCTAC GCGGCG              GGCATCGCCCTGCAG  64 155
CXD79_RS19065 3920656 .. 3920668 -  -3.3  -3.60475   AAGTGTGATCCGAAA                GCGGA CCG CCCAC                TTTGGTTGGGTCGGT  49 498
        trmB NONE
         pip NONE
        thiS NONE
        lysM NONE
CXD79_RS19010 3913219 .. 3913232 -  -5.9  -2.87931   GCCAGGTGCGACAGA               CCGGC GCGG GCCAG                GACGCGGCTGACGGT  48 330
CXD79_RS18990 3909336 .. 3909355 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TTGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CXD79_RS18985 3908273 .. 3908287 -  -2.8  -3.01924   GATTCGCCCGCAAGA               TCCC ACCAATG GGGA               GTTGGGAACGCGTCT  42 101
CXD79_RS18980 3907854 .. 3907886 - -18.5  -5.81412   CGGAGGCAAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTACGGCTGCG 100 63
CXD79_RS18975 3906134 .. 3906162 -  -7.4  -3.53012   GCGCGCTGCTCGAAA       GCGAATCGGC-CC GGCT GGCGGCGATCCGC        GGCACGGACGCCGAC  60 434
CXD79_RS18965 3903356 .. 3903379 -   -21  -2.71364   GCAGCCCGGCAAGCA          GGCGCCCGCC GGCA GGCGGGCGCC           TGGCGGCGTCAGCGC 100 34
CXD79_RS18960 3902678 .. 3902694 - -15.1  -5.53288   TTTAATCGAAAAAAA              CCGGCGC CCG GCGCCGG              ACCATGACTGCGTTC 100 39
CXD79_RS18955 3902395 .. 3902432 - -16.9  -2.65174   AAAATAAGTAATCTA   CCCGGGAGCCTGTCCCC GCAT GGGGACTGGCTCCCGCC    AACTTCAGCCGTCAG  80 104
CXD79_RS18905 3891007 .. 3891033 -  -9.2  -2.52516   CGCGGCACGACGAAG         CCGCCGCCACGC TAG GCCAGGCGCCGG         GGGCGCAGCTGTATC  51 513
        uvrA 3880952 .. 3880986 -  -2.8  -3.01712   GGCCTGGCGGCAAGA    TAGGGGGG--CGGGCG GTTCG CGTCCGTGCCGCCCTA    GTCTAGCGCCGTTTG  42 28
CXD79_RS18855 3880093 .. 3880116 -  -8.9  -3.53012   GGCGGCTGTTCGAAA          TGGGCTGAGG GGCTG CCTC-GCCCA          TGCGGCCTACCCCAA  62 183
CXD79_RS18835 3874349 .. 3874374 -  -2.4  -3.70149   TCGACAGTATCGAAA         GCCAGGCGGAC GATTG GGCCGCA-GGC         CTGGATGTCGATATC  53 331
CXD79_RS18825 NONE
        lysA 3872739 .. 3872768 - -22.3  -3.53012   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 48
CXD79_RS18800 NONE
        hemB NONE
CXD79_RS18775 3862106 .. 3862136 - -15.3  -3.13164   CCCGTAAGCAGTCAA       GCGCGGTGGGCGC GCCAT GCGCCCGCCGCGA       TGTTTTCATGCATCG  78 453
CXD79_RS18675 3851274 .. 3851294 - -15.4  -4.72272   GCCGGCCATGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCCTGAGCCCGG 100 50
CXD79_RS18670 3850247 .. 3850269 - -17.8  -3.72576   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG  93 125
CXD79_RS18585 3838584 .. 3838605 - -15.1  -3.14132   TCTGTTCTTCACCAA           GGCCACGCC TTCG GGCGCGGCC            TAGCTGTGAACTGTC  76 25
CXD79_RS18560 3833001 .. 3833032 -  -2.2  -4.68103   CCAACTGGAACAAAA     GGC-CCGCCACGAC TTCGAG GACGC-GCGGCGCC      AGGCCGTGCAATCGG  76 357
CXD79_RS18520 3822425 .. 3822459 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS18495 3818722 .. 3818771 -  -7.9  -3.91084   GCAGCCTGAAGGAAA CCCGGCTGCCGC-TCACGCC-GCC GCCCG AGCAGGCATGACGCCGC-GCCAGG CCGTTCAGGTCAGCA  68 30
        ilvB 3816231 .. 3816270 -  -4.9  -3.76224   TGGCCAGCGACGAAA CCGCC-TTCATCACC-GGC GCCT GCCTGGAGGTGGATGGCGG  CCGCTGCGTGTAGGC  58 94
CXD79_RS18445 3804640 .. 3804693 -  -9.4  -3.25823   CTGGGGCCACAGCAA CAGGACGT-GGCGGCCGCGGTCGGCG ATTT CGCCCTGCGCCGC-GCCGACGGCCTG TGGGCCTACCAATTG  61 390
CXD79_RS18415 3796139 .. 3796166 -  -8.4  -3.25823   CCTGCCGCACATCAA        GACCGGCAA-GGC CGT GCCGCTGGCGGTC        ACCACCGCCGGCCGG  59 351
CXD79_RS18405 3794090 .. 3794111 -  -4.3  -3.05596   GACGCCGGGACGGAA           GTCCTGCAT CGCC ATGCCGGCC            CCGTCCTTACTTGCG  45 32
CXD79_RS18400 3793832 .. 3793856 - -17.1  -3.20991   TCGAAGTGAAGTGAA          TGACGCCGGGC GCG GCCCGGCGTCG          GGTCAGCCTTGCTCC  84 28
CXD79_RS18370 3784978 .. 3785022 -    -2  -3.17723   GTATTTCGAAGGCAA GCTCAAGCGCCGCACCGATGCC GAC GGCATCG-TGCGTTTCCAG-GC GGCGTAGCGGGCGCG  42 56
CXD79_RS18360 3783425 .. 3783450 - -13.5  -3.38522   GATGCAGTGCAAATA         TTACGTTTACG TAAA CGTAAACGTAA          ACGTAAAGTTGAGTC  75 97
CXD79_RS18310 3773451 .. 3773472 - -11.5  -3.57144   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG  72 95
        rpmH 3767819 .. 3767835 -  -2.1  -2.78384   TCCGCCTGGATTAGA              CGGCCAG ACG CTTGCGG              CCCTTGGCGCGGCGG  38 4
CXD79_RS18285 3767318 .. 3767362 -  -2.8  -4.12902   GAAGTACCGGTAAAA CCGGATCGGGGCGATAAGCAG TCTC CTGATCATCGCGCT-ATCCGT GTGAAGTGAGCATCT  59 10
        yidD NONE
        yidC 3765301 .. 3765320 - -16.4  -5.55664   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC 100 43
CXD79_RS18260 3762739 .. 3762784 - -14.8  -2.78384   CGGCGCCGCAGGACA CGGCCG-AGGTCGCCGGCCGCAA GGC CTGAGGCCGGC--CCTACGGCCG GGCCGTGTCGCTCTG  72 17
CXD79_RS18250 3760088 .. 3760114 -  -7.1  -2.82516   CCCTGTACGACCAGA         GCGCGCCGGCC GACGA GGCCGAGGCGT         TCCGGCGCAGCGGCT  50 68
CXD79_RS18240 3757281 .. 3757313 -  -3.3  -3.28791   ATGTGCGGCCCACAA     GTACGGCGGGATTG AGGCCG CCA-CCCGCCGCGC      CATCGTCCGTGCCGC  47 393
CXD79_RS18170 3749771 .. 3749786 -  -8.2  -3.09273   GCGCGCCAATAGATA              GGCCAC CACA GCGGCC               CCCACCAGGATCAGG  56 199
CXD79_RS18165 3748785 .. 3748809 -   -15   -4.2828   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG  95 52
CXD79_RS18140 3745181 .. 3745196 -    -6  -3.15579   CCAACGCCCCAGCAA              GCGGCG TGCC CGACGC               TCGCGGAAGATCCGC  51 71
CXD79_RS18135 NONE
CXD79_RS18130 3744727 .. 3744743 -  -3.5  -5.00616   TTGCGTTTGAAAAAA              TCGCCTG CGC CCGGCGC              GATGCCGGACAGCGT  81 127
CXD79_RS18125 3737456 .. 3737492 - -11.3  -3.09785   GCATACGCCAATATA    GCCGCAATGCCGGCCGC CGA GCGGCCGGCCCGGCCCC    CGGTCAATACGCCAC  64 29
CXD79_RS18120 3736755 .. 3736770 - -11.8  -5.10461   CGCACGCAAGAAAAA              CGGCCC GCAA GGGCCG               TCTCAAAACGTGGGC 100 118
CXD79_RS18115 NONE
CXD79_RS18110 NONE
CXD79_RS18105 NONE
CXD79_RS18100 NONE
CXD79_RS18095 NONE
CXD79_RS18090 3730641 .. 3730657 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD79_RS18070 NONE
CXD79_RS18065 3726700 .. 3726718 - -10.3  -3.07222   AGGAGCACCTGAAGA             TCCTCGC GGCCT GCGAGGA             AGGCAATGCCGCGCG  59 110
CXD79_RS18045 NONE
        rimO 3721311 .. 3721330 - -11.4  -3.28712   TTGGCTGCGCTACAA            GCGCCACG CCTT CATGGCGC             GCGGCTTGAGCGCCG  66 434
CXD79_RS18030 NONE
CXD79_RS18025 NONE
CXD79_RS18020 NONE
CXD79_RS18015 3718369 .. 3718389 - -11.8  -3.36492   GCTGGAATTGCAGAA            GGCCGGCG GCAAG CGCCAGCC            GGTGGACGTCTTCGT  66 82
CXD79_RS17985 NONE
        dprA NONE
CXD79_RS17975 3711515 .. 3711543 -  -4.3  -3.20723   TGTTCATGAATGGAA        CGGGCGATGCGGC GAG GCCGCGTAGCATG        AGGAGGGCGTATGGG  47 131
CXD79_RS17970 3710782 .. 3710818 -  -2.2  -4.28254   GCTCAAGAGCGAAAA   CCCCAACGT-GCGCCGCA TCC TG-GGCGTGACGCCGGGC   GCCGGCGCCAACCTG  65 237
CXD79_RS17950 3706235 .. 3706260 - -10.3  -3.35679   CGTCGTCACCGAGAA         CGGCGTGGCGC AGAT GCGCCAGGTCG          ACGGCGTGGCCGTGC  63 290
CXD79_RS17935 3704027 .. 3704061 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS17905 3700225 .. 3700239 -  -8.5  -3.14132   CCTGCGCTGGATCAA               CCGCC TGTGC GGCGG               CATGCTGGTCGTGCT  56 123
        rsmB NONE
CXD79_RS17890 NONE
CXD79_RS17885 NONE
CXD79_RS17880 NONE
        trkA NONE
CXD79_RS17870 3691663 .. 3691689 - -11.4  -2.70232   CTGAATAGTACACCA         CCGCGCGGGCAG CGG CCGCGCGCGCCG         CTATTTGCGCCAGAA  62 26
CXD79_RS17865 3690662 .. 3690704 -  -3.2  -3.14344   GACCCGCGCGAGGAA TTCCATGCAGCCTGGCATGC GCC GCACGCCACGCTGGTCGCCA CCATGCCGGACGACA  45 398
CXD79_RS17855 3689164 .. 3689199 -  -2.3  -3.54424   CGGGACGCGCCGAAA    CCCTTGCCATGCGGG ACTTTA CGCGCCCGGCCAGCG     ACCCGCGGCAGTCCG  48 167
CXD79_RS17850 NONE
CXD79_RS17845 3686994 .. 3687040 -  -8.6  -3.53224   CAGCGCGCGCGCAAA CGCCAGCAGGTCCTCGGCCTG CACATC CAGGCCATAGTCCAGCTG-CG GCCCCGACTGCGACA  62 262
CXD79_RS17835 NONE
CXD79_RS17830 3684482 .. 3684493 -  -7.2  -3.68351   GCGTCACCAGCGAAA                CGCC AGAC GGCG                 AGATCGCCGCATCCA  64 278
CXD79_RS17805 NONE
CXD79_RS17800 NONE
CXD79_RS17795 NONE
CXD79_RS17790 NONE
CXD79_RS17785 NONE
CXD79_RS17780 NONE
CXD79_RS17775 NONE
CXD79_RS17770 NONE
CXD79_RS17765 3670273 .. 3670292 - -13.6  -4.52589   TTCCCTTAGATAAAA            CGGGCGTT ACCA AACGCCCG             GCAGGTAACCACTAT 100 37
CXD79_RS17760 3668600 .. 3668614 - -11.4  -3.09635   AGCCTGAGCATCGAA               GTGGCC TAC GGCCAC               GCCTGGCGGGCGCCG  62 125
CXD79_RS17750 NONE
CXD79_RS17745 3665989 .. 3666010 - -10.1  -3.05384   GCTTTCCGCAGGTAA           TCACCGCCA TCAT CGGCGGCGA            CGTGCACGCCGGTTT  59 423
CXD79_RS17715 NONE
CXD79_RS17710 NONE
CXD79_RS17705 NONE
CXD79_RS17700 3658032 .. 3658066 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS17685 3656097 .. 3656133 - -23.8  -2.71693   GAGGAAGGAAAGTCA    GCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGG    GTGGGGGGTTTACAT 100 35
CXD79_RS17670 NONE
CXD79_RS17665 3651405 .. 3651436 -   -15  -2.60075   GCGGGTCGAATGAAG      GCAGCCGCGCCGCC CGAG GGCGGCGCGTTCGC       ATGAGGACGAGGCCC  71 45
CXD79_RS17580 NONE
CXD79_RS17575 NONE
CXD79_RS17570 NONE
CXD79_RS17565 NONE
CXD79_RS17560 NONE
CXD79_RS17555 NONE
CXD79_RS17550 NONE
CXD79_RS17545 NONE
CXD79_RS17540 3624020 .. 3624048 -  -3.7  -3.31726   GGTCGCCACAGAATA       CCTGCGCGCTGG TCCAGG CCGGCGC-CGGG        GTGGCGCTGGTGGAC  47 199
CXD79_RS17530 3622136 .. 3622146 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS17525 3620958 .. 3620970 -  -6.9  -3.29144   CGACCTGCTGCACAA                GGGCA TCG CGCCC                AAGGCCCTGGTGTTC  52 187
CXD79_RS17500 3617383 .. 3617396 -  -4.5  -3.53733   CGGAGGTGATAAACA               CCAGT GATC ACCGG                GCGCTGTTCAGGCCT  52 33
CXD79_RS17495 3615166 .. 3615181 -  -6.8  -3.03124   GCTGACGGCGGAATA              CCTGCG CACG CGCAAG               CAGTTCGGCGTACCG  48 408
CXD79_RS17455 3606700 .. 3606758 -  -7.5  -2.70932   CCTGGCCGGCAAGCA CCAGC-C-C-ATGC-GCCTGGGCATGGCG TGGAT CCCCGTGCCCAGGCCGCGTCGCGTGCTGG AGGCCTTCATGCAGC  49 189
CXD79_RS17435 3601507 .. 3601517 -  -2.4  -3.17075   TGGTGGGCAACGCAA                 TCGG GCG CCGT                 GCATGGCCGTCCCGC  42 42
CXD79_RS17430 3600459 .. 3600472 -  -3.7  -2.56596   GTGTCGATCAATCGA               CGCTG ATGT CGGCG                ACGTTGGCGATGGTT  40 4
CXD79_RS17425 3599225 .. 3599237 -  -4.7  -4.20696   GGAGTAAGGGGAAAA                GCCGG CGG CCGGT                CAGGGAGGCTGTCCC  66 202
CXD79_RS17415 3596490 .. 3596504 -  -2.1  -3.17075   TCTGTGGGAACTCAA              CGAGGC CTTT GCCT-G               CCAGGTGCTTTATTG  43 267
CXD79_RS17400 NONE
CXD79_RS17395 NONE
CXD79_RS17390 NONE
CXD79_RS17385 NONE
CXD79_RS17380 NONE
CXD79_RS17375 3583957 .. 3583967 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS17365 3582935 .. 3582974 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD79_RS17360 3581797 .. 3581828 - -12.2  -3.03338   AGAAGTCCGCGAACA      GCAGGAGGAGCAGG CGCG CCTGGCCCGCCTGC       GCACCTTCGAACTGA  67 101
CXD79_RS17350 3579853 .. 3579879 - -11.5  -3.58231   AAAGAATGGACACAA         GCGGACGCCCG GCGCA CGAACGCCCGC         CGCGAAGGCGGGGTC  72 53
CXD79_RS17345 3578722 .. 3578732 -  -2.4  -3.14344   CAGGTCCTTGAGCAA                 GGTC ATC GCCC                 GCGCATCACAGATCG  42 31
        prmC NONE
        grxD NONE
CXD79_RS17330 3576933 .. 3576959 - -22.4  -3.64703   GCGGCCGTACGCAAA         GAAGCCTGCCCC ATC GGGGCAGGCTTC         AGGTACAGGCAGGCG 100 53
CXD79_RS17325 NONE
CXD79_RS17320 NONE
CXD79_RS17315 NONE
CXD79_RS17310 3570970 .. 3570985 -  -3.2  -3.17685   CAAGGACACATGGAA              GGTGTT AGTG AACTCC               ATCGACAAACTCCCC  44 14
CXD79_RS17305 3570415 .. 3570463 -  -7.9  -3.14132   CTGCGCCTGCAGCAA CACAGCCTGCGCATCCGGGCTG ACCACG CTGCCCGCGGGCGC-GGCCGCG GCTACAGGCGCCGCG  54 130
CXD79_RS17300 3570151 .. 3570175 -  -7.8  -2.91582   CACTGCACGGACAGA         CGCCAGTTCCC ATGC GGGA-CAGGCG          CCTCGCGTATCGGAA  52 61
CXD79_RS17275 3564968 .. 3565011 -  -9.5  -3.44222   CAAAGCAGCAAGTAA CGCCACGG-TGCCTGTCCCC CTTGC GGGGACTGGCACCCACACCG AACCCCGCCCTACCG  63 35
CXD79_RS17230 3557520 .. 3557550 -  -8.2  -3.53012   GCTCGGCGCGGGAAA      GGCGCCTGCCAGC GCCATG GC-GGCCAGCGCC       GGGATCAGGGATAAG  62 194
CXD79_RS17220 3554454 .. 3554470 - -10.8  -2.73875   GGTTCTGGAACACCA              CGCGCG CCACC CGCGCG              CCGGTCAGGACCTTC  60 372
CXD79_RS17210 3552064 .. 3552081 -  -8.3  -3.90112   GGTTTTTCAAGGAAA             GGCCGCC TGGC GGCGGCG              CGGCCCTGCCCTGTC  70 41
CXD79_RS17205 NONE
CXD79_RS17200 NONE
        aspS 3549038 .. 3549070 -  -9.8  -3.64703   GGCGCGTTATCGAAA     CGGGCGAAGCCACGC CATT GCCCGGCCT-GCCCG      ATTCCGGCCGCTGGC  70 81
CXD79_RS17190 NONE
        clsB 3546853 .. 3546865 -  -6.2  -3.14132   TGGTTCCTGGACGAA                GCGG TGACG CCGC                GCATCCTGGCCGGCG  50 111
CXD79_RS17160 3541858 .. 3541901 -  -8.1  -3.18199   TAAGGCGCAAGGCAA GGCGCGGACAGCGTCCGCCGGC GAG GCCGGCGGACGCCG-C-G-GTT TACTGCAGCGGTTCG  54 25
CXD79_RS17155 3540469 .. 3540493 - -10.7  -2.71011   ACGCCGGCTGAAGCA         CGGCGG-CGC GGGCTG GCGGCCGCCG          CGCTTCAGGCGGCGT  60 30
CXD79_RS17145 3538411 .. 3538441 - -10.3  -3.43446   CGATACCGAACAATA       GACCAGGCGCGGG TTGCG CGCGCGCATGGCC       TGCTGCCCCAGCCCC  65 374
CXD79_RS17135 3536684 .. 3536702 -  -8.1  -3.47227   CGGCAAGGACGACAA            GGCGCGCG GCAT CG-GCGCC             GGCCTGTCCGACGCG  58 209
CXD79_RS17075 NONE
CXD79_RS17070 3523968 .. 3523995 -  -7.6  -3.22884   GCACGAAGGCATCAA        GTCGCTGCGCGAG AAG CGCGCGCCG-GAC        TTCCGGTAAGGGGGC  56 114
CXD79_RS17060 NONE
CXD79_RS17055 3521713 .. 3521744 - -13.1  -4.20516   GGGGGACGGAAGAAA      CGTCGCGTCT-GCC AGACA GGCCAGACGCAACG      CGGCGGCGCCGCGAG  91 149
CXD79_RS17045 3518829 .. 3518860 - -17.2  -3.53012   TGGTGGTCTTCGAAA      GACCGGTCCGGCCG TCGC CGGCCCGGCCGGTC       AGATAGGTTGGGCCA  89 24
CXD79_RS17040 NONE
CXD79_RS17035 NONE
CXD79_RS17030 NONE
CXD79_RS17025 NONE
CXD79_RS17020 3513055 .. 3513082 - -21.4  -3.62597   CGGAGGGGGGAACAA        GGTGCCTGTCCC CACG GGGACAGGCACC         CACGCCCTTGGTGCA 100 56
CXD79_RS16940 3495912 .. 3495936 -    -7  -3.01791   ATCGCCGGCCGAACA          GGTGGCGGCG ATGGA CGCGGCCAGC          TACTTCAACCTGTTC  51 234
CXD79_RS16925 NONE
        folB NONE
        ttcA 3489811 .. 3489821 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS16905 3488662 .. 3488681 -  -3.4  -3.30124   GCGCACGCTGGACAA            CGTGCTGC TTAC GCCGCACC             TGGGTTATGTGAACG  47 151
CXD79_RS16875 NONE
CXD79_RS16870 3482324 .. 3482349 -  -6.7   -4.7497   GGCATGCAGCAAAAA         GCCCGG-TCCAG TTA CGGGTTCCGGGC         TTGGCGCTGCACTTC  84 212
CXD79_RS16865 NONE
CXD79_RS16860 NONE
        trpD NONE
        trpC 3478236 .. 3478268 - -12.6   -3.8186   CATCGCAAGGAAGAA     GCGGGCGGCGCGCCG GCGC CGGCGCG-CGGCAGC      GGCCGCTGAGGCCGG  81 55
CXD79_RS16835 3474373 .. 3474405 -    -9  -3.04322   GGCAACTGGCCAAGA      TGGCCATGCGCGCC GAGCA GGCGCGCAGCGTCA      TGTTCCAGACCGCCC  57 46
CXD79_RS16825 3472172 .. 3472213 - -10.1  -2.78463   AGCGCGTGGACCACA CCATGACGGCCGCCGACCTG ACC CAGGTGGGCAGC-GACATCG AATCGCTGGTGCTGT  56 113
CXD79_RS16790 3465923 .. 3465958 -   -19  -3.14132   CTCTTCCCGCAGGAA    TCCGGGTGCCTGTCCC AGCG GGGACAGGCACCCCGT     CATACGCCAGCACGC  90 76
CXD79_RS16775 NONE
CXD79_RS16770 3461495 .. 3461513 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 202
CXD79_RS16745 3452230 .. 3452249 - -12.8  -5.60993   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTACCTGTAA 100 51
CXD79_RS16735 NONE
CXD79_RS16730 3448369 .. 3448425 - -16.4  -2.80398   GAATGAATGCAAGCA TGGCAACTCGATACGGGGTGCGGCGCC GCCA GGCGCCGCACCCGGGA-CGGGACGCCG GCGCGCAACGTCCCT  77 49
CXD79_RS16725 3446966 .. 3447015 -  -6.4  -3.73775   CCGACGCCGACGAAA CCGACG-ACGCCG-CGCCGC ATGTCCAGATGG GCGGCGCCGGCGCGCGCCTG CTGGGCGGGCGCGGC  59 171
CXD79_RS16715 3445573 .. 3445628 -  -2.5  -4.45175   CAGGAAAAAAGGAAA GGGAGATGTCGCGCAGGATC-TGCCGC TTGG GCGGCACGATCTTGC-CGACACGGTTC ATCGTGTAGACGTAT  67 143
CXD79_RS16700 3443108 .. 3443123 - -11.8   -4.7497   GGCAGCCACGAAAAA              CCCGGC CGAA GCCGGG               TTTCTCGTTGAGGCG 100 66
CXD79_RS16695 3441736 .. 3441774 - -20.3  -3.25113   CCGCAAAACTGAATA   CTCGGGTGCCTGTCCCC GCACG GGGGACAGGCACCCGCT   GAATCTTGGTCCCCG 100 68
CXD79_RS16670 3435948 .. 3435975 -  -9.2  -2.61582   GACCCCACCCAGAAC        CCGAAGATCCAGC GCG GCTTGATCT-CGG        TGCGGGCGCGGATAC  54 390
CXD79_RS16645 3430668 .. 3430679 -  -7.2  -3.95456   AAACGGAACAGGAAA                GGGC CGCG GCCC                 CGGGAACTGGCTAGC  66 36
CXD79_RS16640 3429304 .. 3429346 - -14.1  -2.78384   CTGGTGGCCATGATA GGCGC-GGCCAAGGCCGACG GCCA CATCGGCCCCGACGAGCGCC AGTTGCTCGAAACCG  67 302
CXD79_RS16630 3428201 .. 3428219 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 214
CXD79_RS16605 3423145 .. 3423158 -  -2.3  -3.02166   GCCGGAATGAAAGTA               CGGCA TTAT CACCG                GCCCGGATCGTCGGC  41 20
CXD79_RS16600 3422443 .. 3422477 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS16565 NONE
CXD79_RS16560 3413305 .. 3413317 -  -9.1  -3.02511   GCGAGGCGTTCAATA                TCGCC AAC GGCGA                CGTGGTGCTGTGGCA  55 368
CXD79_RS16525 NONE
CXD79_RS16520 NONE
CXD79_RS16515 NONE
CXD79_RS16510 3404673 .. 3404726 -  -4.3  -2.94144   CCGGCAGGTAAAGGA CGATGA-CGGCCAGCGGCAGGAGCGC GGC GCGGCGCAGCGGCAGGCGGATCATCA GTGCACCCCCCGCGC  44 23
CXD79_RS16505 NONE
CXD79_RS16500 NONE
CXD79_RS16495 NONE
CXD79_RS16490 NONE
CXD79_RS16485 3399358 .. 3399394 -  -7.9  -3.85698   GGCGCCGCTGACAAA   GGCGCTGCG-GCCGGC CAGCGC GTCGGCGCGCAGCACG    CGCAAGTCATCGATG  66 110
CXD79_RS16475 3397571 .. 3397585 -  -3.4  -3.78934   GCGGTTGGAGAACAA               CCGCGA AAG CCGGGG               ATCGTTGCGGGTATC  56 202
CXD79_RS16465 NONE
CXD79_RS16460 NONE
CXD79_RS16435 NONE
CXD79_RS16430 3386972 .. 3386999 - -11.4  -4.50976   GTCCAGATGAGAAAA        GCCCGCA-AAACC TGA AGTTTATGCGGGC        TTTCCGGGGCGCTAC 100 63
CXD79_RS16425 3386428 .. 3386447 -    -7  -3.08679   CGGCTCGATGCAATA            GCGCCCGC CTTC GCTGACGC             GTTCTTCAGCTACGG  52 35
CXD79_RS16410 3385361 .. 3385371 -  -3.2  -3.41602   TGCATGGTATCACAA                 TACC CAG GGCA                 TTCATTCCATCACCC  48 27
CXD79_RS16405 NONE
CXD79_RS16400 3383914 .. 3383947 -  -4.6  -4.36411   CATGAATGACGAAAA    TCC-CGACCCGG-TGC TCAG ACAACCGGGTTGTGGA     CGGTAATCAGCTTGG  69 6
CXD79_RS16395 NONE
CXD79_RS16390 NONE
        ureC NONE
        ureE 3380545 .. 3380572 -  -6.8   -3.1372   CAGGCCCTACGAATA        GCTGAAGCCGCC GATC GGCAGCGCCGGC         GAAGACAGATGCAAC  52 62
CXD79_RS16375 NONE
        ureG 3379141 .. 3379181 -  -8.7  -3.58726   GTCCTCTATATATAA  CGGCAGGCGCGCCGGCCCG CAC CGAGCAAGCGCGTGCGCGG  GAATCTTCGGCAAGC  62 99
CXD79_RS16325 3366139 .. 3366156 -  -9.1  -3.16564   CGCCTATTCGACCAA             CCGCGTC ATCG GACGCGA              CAACGCCCTGCCCTG  56 422
CXD79_RS16305 3363345 .. 3363368 - -16.8  -6.06723   GCGGCGAAAAAAAAA          GCCCGAGATC TTGC GATCTCGGGC           TAAATCCACCAAAGG 100 465
CXD79_RS16300 3361889 .. 3361899 -  -6.8   -3.1506   AAATCTCCCTATCAA                 CCGT GTG ACGG                 CTACGGAATTGTATG  52 102
        tviB NONE
        tviC 3359563 .. 3359575 -  -4.8  -3.51232   TGGCTTTCAAATCAA                CGCA GGAAT TGCG                TGTACCAGGGCATGG  52 9
CXD79_RS16285 NONE
CXD79_RS16280 NONE
        asnB NONE
CXD79_RS16270 NONE
CXD79_RS16265 NONE
CXD79_RS16260 3351355 .. 3351382 -    -9  -2.60571   AAGCGCTCAAGGAAG        CGCGGCTGGTCG AGTC CGACCCGCAGCA         GGCCGAGATCCTGGC  51 325
CXD79_RS16245 NONE
CXD79_RS16240 NONE
CXD79_RS16235 3345583 .. 3345608 -  -3.1  -3.54543   ATCCATTGCCGGAAA         CAGGCCGTGCA CTCA TGCGCCACCCG          CCGGCAGCGCCAGCC  49 12
CXD79_RS16230 3344188 .. 3344214 -  -5.9  -5.40072   CTCGTTGCAAAAAAA        GACGCGCAAGCA TACC TG-TTGGGCGTC         AAATCGATGTCAAAT  95 87
CXD79_RS16225 3341956 .. 3341975 -  -7.1  -3.16564   GCTGGAGCTGACCAA            CG-GCGGC AAGCA GCCGCTCG            ACCTGCCCTGGGGCG  53 285
CXD79_RS16210 3338166 .. 3338192 - -10.8  -3.18582   GACCTCAGCGACGAA         CAGAGCCGCG AGCTGAA CGCGGCGCTG         ATCCTGCTGCTGGCC  64 131
CXD79_RS16185 NONE
        lolB 3331897 .. 3331913 -  -6.5  -2.52896   TCACGGCGGAAGCGA              GGGGC TGGGGAT GCCCC              TATTCTAGACCGCCG  45 46
CXD79_RS16175 NONE
CXD79_RS16170 3330848 .. 3330890 -  -4.2  -5.79595   TCGTAAAACAAAAAA GCTGCTGAACTGGAGCCAGT GTCTG ACGGGCG-C-GTTCAACAGC TTTTTTATGTATTGG 100 43
CXD79_RS16165 3329747 .. 3329771 - -12.8  -4.07885   GATCGCCGGTTAAAA          CACGCGGCGC GACAT GCGCTGCGTG          GTTTTTGCGCGCCGC  83 81
CXD79_RS16160 3328998 .. 3329036 - -24.8  -2.91695   CGTATTTGTAAAGTA   CAAAACCCTGCGCATGCA AAT CGCATGCGCAGGGTTTCG   GGGACGTCGGGCACG 100 79
CXD79_RS16155 NONE
CXD79_RS16150 NONE
        ychF 3326351 .. 3326369 -  -6.7  -3.05816   GTATTGTTTATGCAA             CCCATTG ATTTA CAACGGG             CCAATCTGTCCACCA  51 78
CXD79_RS16140 3324946 .. 3324973 - -16.4   -3.4285   GCACTCAAGGGACAA        CGGCCCTATCCT GAAA AGGATAAGGCCG         TTCTACCCACTTCGC  85 67
CXD79_RS16135 NONE
CXD79_RS16130 NONE
CXD79_RS16125 NONE
CXD79_RS16120 NONE
CXD79_RS16115 3316185 .. 3316198 -  -3.1  -2.79183   GCTATCTGTATCATA               CG-GAC TCC GTCTCG               CCGAAAAGGTCACCA  40 7
CXD79_RS16110 NONE
CXD79_RS16105 NONE
CXD79_RS16100 3314309 .. 3314320 -  -5.8  -2.89475   GATCGACATAGCAGA                GCAG CAGA CTGC                 CAGCGGTCTTATGGA  46 240
CXD79_RS16065 3303883 .. 3303910 - -10.5  -3.08679   CGGGGCCAGGCAATA        GGCGAGCGCTCC CGGCC GGCGCGC-CGCC        GGCGCCGCGCTTGGC  62 49
CXD79_RS16055 3301303 .. 3301330 - -13.4  -3.34398   TGCCGCCTGGAAAGA        CCTGCTGCTGCC GCGC GGCAGCAGCCGA         TATGAAGAACTGCGC  74 237
CXD79_RS16025 3296117 .. 3296135 -  -4.6  -2.78596   GATGTTCGGATTATA             CCTACA TGTTTTC TGTAGG             TATATATATTTTCTG  43 85
CXD79_RS16020 NONE
CXD79_RS16015 NONE
CXD79_RS16010 3292402 .. 3292420 -    -3  -3.01001   TAGCGGGAAATGACA             GTCATGGA GTC TCCTTGTC             GTTGTATGCGAGGGG  42 163
CXD79_RS16005 3291346 .. 3291386 -  -4.7   -3.2794   GTCCATGGACACCAA TGG--GCCGGGCTGCGGGGC TTGC GGCCCGCA-CCCGGTAGCCA CCCGCAAGCCTAGTT  49 35
        modA 3290169 .. 3290213 -  -9.2  -2.64616   TGCCCAGGTAGACGA GGTAGGCGCCGCCGATCC ATTTCAGCA GGATCAGCGCCGGCGACC AGGCCTTGAGCAGGG  54 302
CXD79_RS15990 NONE
CXD79_RS15985 NONE
CXD79_RS15980 3288071 .. 3288099 - -11.6  -3.30771   GTACAGGGCCGAGAA        CGGGCCGCGCAG CACTT CCACGCGGCCGG        CCGAGCCGATGTCGA  68 419
CXD79_RS15970 3285762 .. 3285773 -  -7.2  -5.30616   CGAGGGAAATAAAAA                CGCC GGAA GGCG                 GTGGTTCATGGACTG  95 113
CXD79_RS15965 NONE
CXD79_RS15960 3285190 .. 3285216 - -13.7  -3.09831   CGTACCGCAAAAGGA        CG-CGGCCGCCC CGGG GGGCGGCCGTCA         TGGGGCGAGACCGAC  73 51
CXD79_RS15950 3283575 .. 3283591 -  -5.7  -4.36914   GTCGCGCCCACAAAA              GCAGGCC CGC GCCCCGC              CCGCTTAGCGGACCT  72 30
        modA 3282685 .. 3282695 -  -2.4  -2.61264   CTGGTCAGCGACAAG                 GGCG GGA CTCC                 TGCAAGGGGTTACAG  38 35
        modB NONE
        modC 3280490 .. 3280513 -  -5.2  -3.72576   TGCGGCTTTACGAAA          TGCGGCGCAGC TAC GCCGGGCC-CA          AGCCGCAGGGCAGGG  58 394
CXD79_RS15920 3276990 .. 3277011 -  -6.5  -2.87132   TCCTTGCCGCATATA           GCGGCGCAT ATGC ATGCGCCAG            GCCGAACAAGGGAAA  48 257
CXD79_RS15915 3275221 .. 3275271 -  -5.1  -2.50034   CATGAAGGGAAAACG CCCGGTGGAGCGCAGCGGCGCGGG CAGG CCCGCGCCGC-ATGGTCCGGTTGG GTCAGGCCTTAGCCG  44 34
CXD79_RS15910 3273941 .. 3273958 -  -9.1  -3.14132   TCCGGCGCGCATCAA             GCC-GGCG CTG CGCCAGGC             GCGCTTGCAGGCGCT  56 68
CXD79_RS15895 3270043 .. 3270067 -  -8.4   -4.1899   CGACCCTAGGGAAAA          CCCCGGGAGG ACGGG CCGCCCGGGT          TGGCGTGTTCAGCGC  76 34
CXD79_RS15890 NONE
CXD79_RS15885 3267364 .. 3267379 - -11.8  -5.18357   GAAGGCATGAAAAAA              GGCGGC CGCG GCCGCC               TTTTCCGGATGGACA 100 50
CXD79_RS15880 3266101 .. 3266135 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 259
CXD79_RS15840 NONE
CXD79_RS15835 3257610 .. 3257628 -  -2.2  -3.57263   ATTCCGACGCGGAAA             GCCCCTGG ACG CCCGGGAT             GGCCGCCGTTTCAGT  48 36
CXD79_RS15830 NONE
CXD79_RS15825 NONE
        xerC 3254525 .. 3254560 -  -8.9  -2.80816   GCCTGATCGAGTACA    CGCAGCGCGACGCCGA GTTCA CCGGCGTCGAGG-GCG    AAGTCCGGCACCGCT  52 436
CXD79_RS15785 3247724 .. 3247750 -  -3.8  -3.93556   ATCGATGCAACGAAA         GAAGATGG GGGCGGAATTT CCATCTTC         AAGAGGGGACGGAGC  59 76
CXD79_RS15780 3246290 .. 3246306 - -10.1  -2.57795   TCCACTATGAATCGA              TCCGGGC GCG GCCCGAA              TATTCGCGCCTGGCT  57 128
        dksA 3245728 .. 3245751 - -13.2  -5.07652   GGTCCGAAAACAAAA          GGGCTATGCC GTGG AGCATAGCCC           TGGTAATGCGTTCGG 100 76
        hslV NONE
        hslU 3243752 .. 3243777 - -11.9  -3.81027   TCCAAGTAAGGGAAA         GGCCGCGCTACA GCA CGTAGCG-GGCC         AGGTCCTGGCTGCCG  79 7
CXD79_RS15750 3242406 .. 3242416 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD79_RS15745 3241384 .. 3241423 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAC CTAG GTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD79_RS15740 3239997 .. 3240014 - -11.3  -2.56596   GCGCGCATCAAGCGA             CAGCGCA TCGA TGCGCTG              CCTGGCCAGGGCCAA  59 364
CXD79_RS15705 NONE
        zapA 3232818 .. 3232832 -  -2.8  -2.95102   ACGGCAGGGACAAAC               CATGAA TAC TGCATG               AATACTGCGCGCGAG  42 55
        ssrS 3232594 .. 3232628 - -12.3  -3.05993   GGAGGGAGAGAGACA    TCCGAAGGCAGGCCTGC GAT ACAGGCCTGCCT--GGA    TAGATGCCCCGCCTG  67 27
        ilvD NONE
CXD79_RS15670 NONE
        msrA 3226799 .. 3226830 - -10.8  -3.69256   AGGCACCGAAGAGAA      GGGGCAGATCCAGG AATA CCTGGACCTGTACC       GCGGCGAAGGCATCC  74 458
CXD79_RS15655 3225176 .. 3225190 -  -4.9  -3.56643   CGGAGATCCTGCAAA               CCGCA TGATT CGCGG               TTCCGGCTTCGTCGC  52 289
CXD79_RS15650 NONE
CXD79_RS15645 NONE
CXD79_RS15640 3222693 .. 3222731 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD79_RS15635 3219458 .. 3219468 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 3219249 .. 3219283 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD79_RS15625 3218286 .. 3218306 -   -14  -4.54727   GCCTGCAAACGAAAA            CGGCTGGC ACGAA GCCAGCCG            TTGCGAGCGGAACCG 100 56
CXD79_RS15615 NONE
CXD79_RS15610 3214996 .. 3215050 -  -9.9  -3.56862   AGAAACCCGCCGAAA CCGCCAAGCC-CGCCGCGGCGCGCC CCAAGCC GGTGCG-CGCGGCACGGCTGAGCGC CTGGGATCTGCGCGA  67 285
        rnpB 3212902 .. 3212922 - -19.7  -2.52464   GGGCGCCGTAAGCCA            GCCGGCCGG ATT CCGGCCGGC            TGTCATGAAAATGCA  93 41
        mraZ NONE
        rsmH NONE
        ftsL 3210840 .. 3210861 -  -6.5  -4.16016   GGATTGTCGAAGAAA           GGCACCC-GC CTC ACTGGGCGCC           TCCGGCGGGCTGGTT  66 14
CXD79_RS15580 NONE
        murF NONE
CXD79_RS15570 NONE
CXD79_RS15565 NONE
        ftsW NONE
        murG NONE
CXD79_RS15550 NONE
CXD79_RS15545 3198980 .. 3198992 -  -3.3  -2.87132   GCGTCGTTCCACACA                GAGCG TCC CGTTC                AATCTTGTCGCGCCG  41 24
CXD79_RS15540 NONE
        ftsA 3196813 .. 3196824 -  -3.6  -3.55622   GTGAATCGCCTCAAA                GCCG AAGC CGAC                 CGTGGTCCGCAACGG  51 127
        ftsZ 3195357 .. 3195368 -    -3  -3.63968   TGCGAAAGCCGGAAA                TCTA CCAA TAGA                 CACCGGCATAACCGG  53 210
CXD79_RS15525 3194346 .. 3194374 - -14.6  -4.57073   CATCCCCGCCAAAAA        GCCTATGGCCGC TCAGC GCGGCCATAGGA        CGAAAACCGATATCG 100 52
CXD79_RS15515 3192690 .. 3192715 -  -5.4   -3.5394   AAACCCGCCGGGAAA         CGATCCAGTT TAACGC ACCTGGACCG          CAACGGCCTGCCGTG  54 77
        secA NONE
CXD79_RS15505 3188967 .. 3188980 -  -5.9  -4.19704   TAAGGTCAGTGAAAA               CGGCC TGCC GGCCA                TCCATGGATCACGCA  70 161
CXD79_RS15500 3187573 .. 3187604 -  -8.6  -2.82635   ATCCCGATCACTACA      GCCG-GCACGTCGCC TAC GCCGACCCGCACGGC      AGCTTCACCATTGCC  53 368
CXD79_RS15490 3186449 .. 3186471 -  -4.8  -2.57132   GCCCTTTTCGATAAG           GGGCGC ATTATGCCGCA GCGCCC           GCGCCGCGCGTGCGC  42 10
CXD79_RS15485 NONE
CXD79_RS15480 3184582 .. 3184613 -  -4.3  -2.62396   TACCTTGCGAGATGA      CGGGCCTGGCATG CCCCGC CAGGCAAAACCCG       TTCACGGCGCACGCC  42 79
CXD79_RS15475 3183671 .. 3183689 -  -6.7  -4.37092   ATGGTTTCCAGAAAA            TCGGCCGC ATCG GCG-CCGA             TACCCGCCTGGGCAT  72 212
CXD79_RS15435 3175920 .. 3175933 -  -5.9  -3.20991   TCCAACCGAATTCAA               GCCGA CAGG CCGGC                CACGCTGCGATCCAG  51 8
        aroQ NONE
CXD79_RS15425 NONE
        accC 3173061 .. 3173111 -  -8.8  -2.55668   GAGTTCGATATGAAT CGCGTCG--CGCGCGGCGTCGGGC ACCAG GCCCGGCACGGCGGGGTCGTCGCG GTGCCAGCTGGGCAC  52 422
CXD79_RS15410 NONE
CXD79_RS15405 NONE
CXD79_RS15400 3169775 .. 3169793 - -13.1  -5.40072   GCCGCCGCAAAAAAA             CGCCCGC ATGAA GCGGGCG             TCTTGCCGGAAGCAG 100 48
CXD79_RS15395 3169240 .. 3169277 -  -4.8  -2.78384   CGGCGCCCCAGTACA  GGCC-CAGCGAC-AGCGC GACG GCGCTTGCCATCGCGGCC   AGGTGGGACAGCAGG  43 44
CXD79_RS15390 NONE
CXD79_RS15385 NONE
CXD79_RS15380 3166867 .. 3166882 -    -6  -2.56838   TAGATCGAAATACAT              GCCGCG CACT CCCGGC               GGATCAGATAGGACT  46 29
CXD79_RS15375 3165407 .. 3165419 - -10.5  -3.53091   ATTCGGCGTCTGAAA                CGGCG CTA CGCCG                CCGCCGGAATCGCTG  67 18
CXD79_RS15345 3155798 .. 3155813 -  -3.3  -3.53012   TGTTTTCGCCGCAAA              CGAAA TATTTG TTTCG               CATTATAGGGATTAC  49 155
CXD79_RS15340 3155144 .. 3155158 -  -5.6   -4.6951   ACCACGCAAAACAAA               CACGAC AGC GCCGCG               TGCCGGACTGCCGAC  77 185
CXD79_RS15335 3154533 .. 3154588 -  -3.3  -3.40522   ACTTTCGGACGACAA CGACATGGCGGGTAGCGGCGGC-GACGT GGG AAGTCCGCCACCT-TACCCGA-ATGGCG CGCCGCTGGCGACAA  48 44
CXD79_RS15330 3153071 .. 3153093 - -11.2  -3.01712   GTTCTGCGGCGAATA           CCAGCCCGCC CCC GCCGAGCTGG           CGGCCCAGCACCTGA  62 283
CXD79_RS15320 3149146 .. 3149180 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS15300 3145722 .. 3145732 -  -2.4  -3.78934   TGTTGGTCACAATAA                 GGCG GAT CGCA                 GAGGATCGCGAAAGA  54 126
        dbpA 3144334 .. 3144348 -  -4.2  -3.28712   CCGCCGCGCTCAGAA               CTCTTC CAG GAAGCG               CATGCGGAACCGCCG  47 5
CXD79_RS15290 3143308 .. 3143337 -   -12  -3.16564   CGTGCAGCCCATCAA       CCGGCTGTGCGC CGCGGT GCGCGCCGCCGG        CGGCAGCGTGGTCTG  68 521
        pmbA 3137496 .. 3137521 - -19.1  -3.02096   GCCATGAACGAGACA         GTGCCTGTCCC CACG GGGACAGGCAC          CCTGCCGGCGCCGGC  90 51
CXD79_RS15250 3136054 .. 3136088 - -21.5  -3.53012   GGCGTTGCGCCCAAA    CAG-CAGGGGCCGCCC CGAA GGGCGGCCCCTGGCCG     GACCGAAACGGCGGC 100 45
CXD79_RS15245 NONE
CXD79_RS15240 3134946 .. 3134975 - -20.9  -3.28791   ACCGGGGCGCCATAA       GCAAAAAGGCCGC TTTC GCGGCCTTTTTGC        GGGACATTAGCGCTT 100 32
CXD79_RS15235 NONE
CXD79_RS15230 3132923 .. 3132942 -  -4.2  -2.80074   GCCCGGATAAGATCA            CTATAGCG CAGC CGCGACAG             GACTCAAAATTCCAG  41 29
        erpA 3132434 .. 3132459 - -18.3  -4.54727   GCGCCCAAACGAAAA         GGCCCTCCGGC GCAT GCCGAAGGGCC          TCGATCGCGGACCGG 100 53
CXD79_RS15205 3127317 .. 3127327 -  -4.6  -3.30124   TGGGACCCTCGATAA                 GAGG CTA CCCC                 ACCAACTTAACACGC  49 19
CXD79_RS15200 3126581 .. 3126602 -  -2.9  -4.62069   CGTCTACCGCAAAAA           TGCCTCAAG TCGG CATGAGCCA            GGCTCAAGCAAGCCC  71 52
CXD79_RS15195 3125106 .. 3125127 - -15.9  -5.30155   CCATCAATGAAAAAA           GACAGGCCC TTGC GGGCCTGTC            TTGCCGGCGGCGGGC 100 59
        nrdR 3124192 .. 3124216 -  -8.6  -2.90194   ACGGCCGCAACCACA         TGCACCCCGGC GTGC ACCG-GGTGCA          GGACGCCATCGTGCA  54 330
        ribD 3121546 .. 3121560 -  -9.2   -2.9006   AACCCATCGGATAGA               CGCGCG CCA CGCGCA               CCGCGTTCCGATCGC  56 98
CXD79_RS15155 NONE
CXD79_RS15150 NONE
CXD79_RS15145 3117176 .. 3117218 -  -2.5  -3.72576   CGCTGGCGCAGCAAA GCTGCG-CGCGGCTGGCCGAC CTG GACGGCCAGC-GCTTCATCGC GTTCTCGCGCGAGAA  53 380
CXD79_RS15135 3115243 .. 3115277 -  -6.3  -3.65522   CATGCAGGGCAACAA    CACCGGCCTGCTCGTCG GTC CGGCG-GT-GGCCGGCG    CCATTGCCGGCGCAT  57 138
CXD79_RS15125 3113149 .. 3113194 - -15.3  -3.05498   CATGCGATATATATA CACCGGC-CGGCGCGGCCGATG CGG CGTCAGCCGCGCAGCGCCGCCG CGCCTTCGCGCAGGC  77 6
CXD79_RS15115 3111447 .. 3111482 -   -19  -2.99319   AATGTCGGAGAGAGA    GGGGGGTGCCTGTCCC CGCC GGGACAGGCACCCCTT     GCCACGGGTCGGGAC  90 93
CXD79_RS15110 3110224 .. 3110254 -  -7.4  -2.66969   TATCAAGACAACGGA       GGGAGCGCGGATCG CAG CGATCCGCGGCAGC       GGTTTCCCGGGCGGC  50 175
CXD79_RS15105 NONE
CXD79_RS15100 3108455 .. 3108468 -  -4.5  -3.35813   CTTGATTTCAATCAA               GCTGCG CTT CGC-GC               TCCGGGCCGGGCTTC  51 4
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD 3104297 .. 3104330 - -28.3  -3.86015   CACCCCCGCCACAAA     CGACAACCCCCCGGG CAAG CCCGGGGGGTTGTCG      GCGAACCAAGGCCGG 100 74
CXD79_RS15045 NONE
CXD79_RS15040 NONE
CXD79_RS15035 NONE
CXD79_RS15025 3093122 .. 3093138 -  -5.7  -3.44229   AGCTTACGACGACAA              GGCGCGC CCG GCACCCC              CGGGATTGCACCCAG  53 54
CXD79_RS15020 3092380 .. 3092430 -  -2.3  -2.62184   CCGGCGCCTACATGA TGGCCCAGGCGATGGGC-GCCG-GC CTG GCGCGTCCGCCCGTCGGCTGGCACG TCATGGCCGGCCTGG  38 227
CXD79_RS15010 NONE
CXD79_RS15005 NONE
CXD79_RS15000 NONE
CXD79_RS14995 3089567 .. 3089577 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS14990 3088276 .. 3088300 -  -4.1  -3.53012   TTCGGTTCGGCCAAA          TCGGTGCGC GCCCCCA GCGCTCCGG          TACGCCGCAAGGCTG  49 288
CXD79_RS14980 3087146 .. 3087157 -  -3.6  -3.48395   ATTCCGTCTATAGAA                CGCG ATGA CGCA                 GGGCAGGCAGGCTGG  49 6
        tldD 3085609 .. 3085626 -  -6.9   -5.9873   CTAGCACAAAAAAAA             CCGCGCG TCAC CACGCGA              TTTTTCCAGGCCAGG 100 66
        aroG 3084035 .. 3084055 -  -9.7  -2.52464   GCCGGCGCGAATCCA            TCATCGGGG CAG CCACGATGA            AGGATTACGCCTTGT  55 307
CXD79_RS14960 3070069 .. 3070091 - -19.2  -4.72272   GGCGGGCATGAAAAA           GCCCACGCGA CCT TCGCGTGGGC           TTGCCGGGCACCGCG 100 57
CXD79_RS14955 NONE
        glcE NONE
CXD79_RS14945 3065688 .. 3065723 - -15.4  -3.68619   TGGAATTCATCGAAA    CGCGCGTCAAGCCC TGGGTGGC GGGCACGACGCGCG     TCGATACCGGCCGCC  88 408
CXD79_RS14930 3061763 .. 3061800 - -20.5   -2.6563   CCGTGGAATAAGGCA   CGGGGCC-GGTGCGGCGC ATG GCGCCGCGCCGGGGCCCG   CCTAACGGCGCGCGC  95 27
CXD79_RS14900 NONE
        mnmA 3054421 .. 3054453 - -11.1  -3.73775   CCCAGGTTTATGAAA      CCGCTGTGGCGGCCG CGG CCGCGGCCACCGCGA      GACCGGCGCGCCTCC  73 63
CXD79_RS14890 3053480 .. 3053535 - -24.2  -3.05596   GACCGCCTGACCGAA CCGGCGTGCAATGAAAAAGGCGGCTC GCAT GAGCCGCCTTTTTCATTGCCGGCCAC CCTGGCCGCCGACCG 100 62
CXD79_RS14880 NONE
CXD79_RS14875 3050754 .. 3050769 - -10.4  -5.96521   ACGAACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTGCCTTGC 100 62
CXD79_RS14860 NONE
CXD79_RS14855 3047047 .. 3047081 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS14835 NONE
CXD79_RS14830 NONE
CXD79_RS14825 NONE
CXD79_RS14820 NONE
CXD79_RS14815 3040881 .. 3040898 -  -2.6  -2.66869   ATATGGAAGAACTCA             CCGCCA TCTCCT TGGCGC              CGGCGCGCCGGCGCG  38 49
CXD79_RS14810 NONE
CXD79_RS14805 NONE
CXD79_RS14800 NONE
CXD79_RS14795 3037506 .. 3037547 - -14.5  -3.53012   GCTTGTCGGCCGAAA GCACGCGCGCCGCCGGCCT GTCCTG AAGC-GGCGGCGC-CGCGC GGACGCGGCGCGCCG  81 43
CXD79_RS14780 NONE
CXD79_RS14775 NONE
CXD79_RS14770 NONE
CXD79_RS14765 NONE
CXD79_RS14755 3030166 .. 3030221 -  -7.2  -3.06696   TCGCGTCGGAATACA GGCCCAGGCAGCCGTGGCTGATGCGC CCGC GCGGCTCGACCGCGGTGGCCTCGACC ATCACCAGGCCGGCG  51 205
CXD79_RS14730 3026608 .. 3026622 -  -3.5  -2.72344   TTCGAGTTCGAATTA              GCGCGC ATGG GCG-GC               CTCCAGCAGTTGGAC  41 8
CXD79_RS14725 NONE
CXD79_RS14720 3024863 .. 3024879 - -10.8  -3.31144   GCCCGAGGGCTACAA              GCGCCG CTCGC CGGCGC              TCGATACCTTCAGGC  66 35
CXD79_RS14705 3021849 .. 3021864 -  -2.5  -3.33696   CTCCTGGGTAATGAA              CCAGGC GGTCG GCC-GG              CTCAGTTGATCTGTA  44 27
CXD79_RS14700 3020421 .. 3020451 - -21.8  -3.23899   GCTCAAGTAAGGCAA       GCCGCCCGGCCGGC ACG GCCGGCCAGGCGCC       GCTCAGCGCGGCGCG 100 28
CXD79_RS14690 3018345 .. 3018381 - -23.8  -4.26076   GCACCGCCATGAAAA   GGCGCGG-CGGCCTCCC GCGA GGGAAGCCGTCCGCGCC    GGGATGAGCGGCGGG 100 70
CXD79_RS14685 3017456 .. 3017489 -  -8.7  -3.18681   CGCGAACCCGACGAA     CTGCTGACGCCGGCCC AGC AGGCCGGCAAC-GCCG     AGCACTACGCCCGCC  56 400
CXD79_RS14670 3014329 .. 3014371 - -12.6  -3.16564   GGGCTACCTGATCAA CGCGGCGACGACCACGCTGG ACA CCAGCACCATGTTCGCCGCG CTGATCAGCCTGGCC  68 140
CXD79_RS14635 3008547 .. 3008557 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 178
CXD79_RS14630 3007498 .. 3007512 -  -3.5  -2.53382   ACGAGGCGCAAGTCA               TGCCC TCGAT AGGCA               GGCTGATGGCGCCCG  40 56
CXD79_RS14625 NONE
CXD79_RS14620 3004283 .. 3004304 - -12.9   -3.8591   TCCTACAATGAATAA           CGGCGCGGG CACG CCCGCGCCC            GCGGATACCGACACG  83 52
CXD79_RS14615 3002873 .. 3002898 -  -3.1  -3.15544   GCTGATGCTGACCAA         GCGCGCCGCCA GCTA TTACGCCACGC          CGCAGATCGCCTTCG  43 186
CXD79_RS14605 NONE
CXD79_RS14600 NONE
CXD79_RS14595 NONE
CXD79_RS14590 2998007 .. 2998017 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 154
CXD79_RS14585 2996530 .. 2996540 -  -8.2  -3.13899   AAGCGTGCAGGAATA                 CGCC CTG GGCG                 GCATGTACGATTTCG  56 488
CXD79_RS14570 2993248 .. 2993282 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS14555 2991271 .. 2991284 -  -3.8  -3.53224   CATTTGCCCGTCAAA               GCGA TCAAAG TCGC                CGCGAACGCGCACCC  51 314
CXD79_RS14545 2989354 .. 2989369 - -10.4  -2.89881   TATTCATTCGACACA              CTGCGG CGAA CCGCAG               CCCTGTGCGCATTGC  59 243
CXD79_RS14535 2988932 .. 2988947 -  -6.1  -3.31461   CACCCACTGGGACAA              GCGTG TCTCGC CACGC               AAAGACACCCGGACC  53 55
CXD79_RS14530 2987677 .. 2987705 - -17.5  -4.11216   CCGCCATTTTTAAAA        GGCCTTGCAACGC ATC GAGTTGCAAGGCC        TTGGTTTCTAGAGCC 100 127
CXD79_RS14505 2985158 .. 2985168 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 65
CXD79_RS14500 2983974 .. 2984030 -  -7.9  -3.63694   AGGCAGCTTCAAGAA GCC-CGACGCCGGCG-TGCATGTCGGGCC GCT GGC-CGCC-CGCGGCGCCGGCGCGGTGGC CCTGAGCGTGCTCTT  60 149
CXD79_RS14480 2980238 .. 2980262 -  -5.6  -3.91897   CGTTGCACGGATAAA         GACGGGCC-GC GACG GCTGGCGCGCC          AGGACGAGGCTGTCC  63 51
CXD79_RS14425 NONE
CXD79_RS14420 NONE
CXD79_RS14415 NONE
CXD79_RS14410 NONE
CXD79_RS14405 NONE
CXD79_RS14400 NONE
CXD79_RS14395 2965954 .. 2965981 -  -4.7  -4.07568   CGGCGTGGCGGAAAA        GGCCGCCGCGT TCGTGC AGGCGATGGCC         GAGGTGGCAGGGGCG  63 253
CXD79_RS14350 NONE
CXD79_RS14345 NONE
CXD79_RS14340 2954110 .. 2954134 -  -3.4  -3.61517   ATTCGTCGTGAAGAA          GGATCCGGCC CTGAC GGCCGAAGCG          GTGCTGCAATGGTGC  51 154
CXD79_RS14330 2951174 .. 2951210 -  -5.1  -3.13403   GGTGCGGCACGAAGA  CGGCTCGCTGGCGAC-GC TGCG GCTGCTGCC-GCG-GCCG   CTGACGCGCACGCTC  47 132
CXD79_RS14320 2949254 .. 2949280 -  -4.3    -3.445   TTATGCAGGAAAAAC         GTGTCCTAAGC GCGCG GCTCAGGTCGC         CAGCTTCACGATTCC  51 17
CXD79_RS14315 NONE
        mgtE 2947173 .. 2947183 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 157
CXD79_RS14285 NONE
CXD79_RS14280 NONE
CXD79_RS14275 NONE
CXD79_RS14270 2938374 .. 2938390 -  -2.2  -3.13522   ATCGCGGGATCAATA              GGAGAA TTCAT TTCGCC              TTACCTGTCACGGGC  42 176
CXD79_RS14265 2937409 .. 2937422 -  -2.3  -3.09933   CGGCAAGCCATGCAA               TGCTG GCCC CGGCA                AGGGATAGCCCGCCA  42 190
CXD79_RS14260 2936969 .. 2936983 -  -7.1  -2.70932   TGGGTCTGCCAACCA               GGCTC TGTCT GAGCC               CTGTTACTCGGCCGC  48 29
        priB NONE
        rpsR NONE
CXD79_RS14245 2935741 .. 2935757 - -10.8  -5.75342   GCCCTCGAAAAAAAA              GCCGGC ACCAG GCCGGC              TTTTTTCAGGCATGC 100 48
CXD79_RS14240 NONE
CXD79_RS14235 2933289 .. 2933322 -  -2.9  -4.56597   CTGCGGCTCGAAAAA     GAGCCTGGCCAGCGG TATC CCGATGGCCCAGGTG      ATCTTTGCCGGACAG  71 160
CXD79_RS14205 2927232 .. 2927246 -  -2.1  -3.07935   ATCGGATTCATTTAA               GCAAA CCGTC CTTGC               GGAACATATCCTTGA  41 3
CXD79_RS14200 NONE
CXD79_RS14195 2924457 .. 2924494 - -28.5  -4.26076   GGACGGCCATGAAAA   GGCAACCCCCGGGCGCC TTGC GGCGGCCGGGGGTTGCC    CTTGCAAACAGCCTG 100 51
CXD79_RS14190 2923998 .. 2924022 - -17.1  -4.36914   GCTTGCGCGAGAAAA          GCCCGCCAGCA TCG CGCCGGCGGGC          TTTTTTTCACGGTTC 100 88
CXD79_RS14185 NONE
CXD79_RS14180 2921635 .. 2921652 -  -4.1  -2.52464   CGGTGCCCGAAGGCA             CGCAGGTC TTT GACCC-CG             TACCAGCGGTGGCTG  40 130
        garL 2916982 .. 2916999 - -11.3   -4.0616   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC  81 82
CXD79_RS14095 2907721 .. 2907742 -  -2.8  -3.25072   CGCATCATAACCGAA           CCGCCGCG CCGCCC CCCGGCTG            CCCGCAACGCCAGCA  46 109
CXD79_RS14090 NONE
CXD79_RS14085 2905574 .. 2905594 - -19.7  -3.75153   TGGCTGCAATGCAAA            CGGCCCGGC AGG GCCGGGCCG            TCTCGATCGCACGTG 100 47
CXD79_RS14080 2904079 .. 2904102 -  -6.6  -3.05343   CGCAGATGTCCAACA          GACGGACGCC AAAC GTGGTCCGTC           TATTCCGTGGACGCC  49 25
        pcaF 2902737 .. 2902752 - -10.4   -5.1925   CCAGAACGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTGCCATGCCGG 100 54
        clpS 2901254 .. 2901272 -    -8  -4.19704   CAAGGCCAGGCAAAA             CGACGCGG CGA CCGCGCCC             GATGCGGATCAGGTC  74 34
CXD79_RS14055 NONE
        pbpC NONE
        clpA 2891450 .. 2891463 -  -4.5  -2.94747   GCAGGCGATCAGAGA               GCGTG GATC CACAC                GGTCAGTCGATCAGT  45 28
CXD79_RS14040 NONE
CXD79_RS14035 NONE
CXD79_RS14030 2887754 .. 2887782 -  -5.3  -3.16564   CGCGTACGGTATTAA        GGTTAACCCGTAT ACG AAAAAGGTTAACC        TTCTGTTTTCGCGTC  49 20
CXD79_RS14025 2883522 .. 2883532 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 292
CXD79_RS14020 NONE
CXD79_RS14015 2881306 .. 2881338 -   -17  -2.71712   GCGGCTGCGGCAAAT     GGCGGCGCAGCGCCC CGGG GAGC-CCGCGCCGCC      GGCACAGGCCGATCA  80 38
CXD79_RS14010 NONE
CXD79_RS14005 NONE
CXD79_RS14000 NONE
CXD79_RS13995 2877635 .. 2877664 -  -3.3   -3.9461   GTTCCGCAAGAAGAA       CCGGCGCCCGTGC GTGC GGACTGGCTCAGG        CCTCGACTTCGCCCA  58 21
CXD79_RS13985 2875566 .. 2875581 - -11.8  -5.86061   CCCCACCAAAAAAAA              CCGCCC CGAG GGGCGG               CTTGAAAATCGAACG 100 58
CXD79_RS13965 2869549 .. 2869561 -  -6.2  -4.15565   CCGACGATGGCAAAA                GCGG GCAGG CCGC                TGCCCAGATGGGTCT  66 211
CXD79_RS13955 2866639 .. 2866672 -  -5.8  -2.64616   GCGCCAGCCAGATGA     GCGGCGACGTGCTG GTGGTG CAGATCGCCGGCGC      GGCGCTGGCCATCGT  45 443
        cyoB NONE
        cyoC NONE
        cyoD NONE
CXD79_RS13925 2860652 .. 2860684 - -14.1  -3.53012   GCGCCCGGGCGCAAA     CGCG-GGCGGCGCG CTCAGC CGCGCCGTCGCGCG      CGCAGCTCGTGGCGC  78 7
CXD79_RS13920 2859875 .. 2859908 -  -5.1   -4.1899   GGATCGGATTGAAAA     GGGCGGC-CGCGCTCA GAC CGAGCGCGTGATGCCG     CCGTCGATGCGGATG  69 4
        hutG 2858861 .. 2858895 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS13895 2854101 .. 2854122 -  -7.9  -3.78419   GGAGGAAAGATACAA           GGCACCCCG TCAT CAGGACGCC            TGGTGCCTGCCCGCG  66 16
CXD79_RS13890 2852739 .. 2852757 - -13.8  -3.21099   TGTCCCCATGACGAA             CGGCCGCC GCG AGCGGCCG             TTTGCTTGTCTGGCG  73 173
CXD79_RS13875 2850244 .. 2850265 -  -2.8  -2.64616   CCGCCAGGTACAGCA           GGCCCTGG TTCATG CCTGGCCC            GCCGCGCAGGGCAGG  39 13
CXD79_RS13870 2849341 .. 2849370 - -23.7  -3.53224   GACTGCCGCGGCAAA       GGGAGCCTGTCCC CGCT GGGACAGGCTCCC        GGGTATGTAGTTACC 100 36
CXD79_RS13855 2846299 .. 2846316 -  -2.5  -2.57344   TACGCGGCGCACAAT             CCCGGGC TGAA GGCCGGC              GCGGCCTGGTACGGT  38 356
        moaC NONE
CXD79_RS13835 NONE
CXD79_RS13830 NONE
        moaB NONE
CXD79_RS13820 2839063 .. 2839090 - -21.4  -2.70932   TCGGGGGGTGAACGA        GGTGCCTGTCCC CGTG GGGACAGGCACC         TGCGGTGTCCCTCGG 100 138
CXD79_RS13805 2835669 .. 2835679 -  -5.4  -4.09243   CATAGGCGCGGAAAA                 TCTC GAC GAGA                 AGAAAACATATTCTC  64 105
CXD79_RS13800 2835026 .. 2835043 -  -9.8  -4.65895   CGCTCCATGTAAAAA             CCCGGC CTGCGC GCCGGG              TTTTTACATGCCGCG  93 54
CXD79_RS13790 NONE
CXD79_RS13785 NONE
CXD79_RS13780 2829771 .. 2829800 -  -7.7  -3.28712   CGCGCTGGCGCACAA       GGCCGCCGC-GCGC GGC GCGCTGGTGCAGCC       GGCCGCCTACACGCT  55 297
         ggt NONE
CXD79_RS13745 2822306 .. 2822364 - -21.6  -4.65895   GTCGCCACCGAAAAA CGGGCGCGGCGGCGCCCGCGC-GCCGCG CCGAT CGCGGCAGC-CGGCCGCCGCTGCGGCGG CCCGCCGCCCCCACC 100 45
CXD79_RS13740 2820979 .. 2821026 - -11.9  -2.62184   TGGCGCGCGAGATGA CGCTG-TCGGTCCAGCCGCCGA AATAG CCGGCGGCCAGTCCGAACGGCA CCCCCACCGCCAGGG  61 344
CXD79_RS13715 NONE
CXD79_RS13710 2816285 .. 2816300 -  -2.4  -4.10657   CGATATCCTCGAAAA              GCTGGG TATC CCCGAC               AAGGCCCTGGTGCTG  61 414
CXD79_RS13700 2814615 .. 2814650 -   -11  -3.97636   ACTGGAATGGAGAAA    CCGGCGGCGCCGTCAGG CCG CCTTGCGGCGC-GCCTG    CTTGTCGGCGTGGGC  79 2
CXD79_RS13695 NONE
        paaI NONE
        paaJ 2812597 .. 2812615 -  -5.9  -3.37796   CTTCACCAGCGAGAA             CACCGGC GTGAT GCCGCTG             CCCACCGCGAACGCC  55 405
CXD79_RS13670 NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF 2806435 .. 2806466 - -18.8  -3.55444   CGTCTACCCCTGAAA      CGGCAACGCCGGCCA TGG CGGCCGGCGTTGC-G      CCCTGCGAACCCGCC  95 45
CXD79_RS13640 2804360 .. 2804394 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS13610 2795963 .. 2795984 - -14.5  -5.55769   CGGGACAATAAAAAA           CGGCCTTTC TCGC GAAAGGCCG            TTCGTAGGGAGCGCA 100 50
CXD79_RS13605 2787907 .. 2787941 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS13575 NONE
CXD79_RS13570 2782301 .. 2782324 -    -8  -3.27475   TCCCCGACCACAACA          GCCAGTGCCG CAAC CTGCACGGGC           ACCGGTACGTGCTGG  55 406
CXD79_RS13555 2781036 .. 2781073 -  -6.8  -3.53012   GCGCCGGCGGGCAAA   CAGCCCGGCGCGCGCT TCAGTC ATCGCGCACCCTGCCG    CGCAGGCGCTTGGTT  58 4
CXD79_RS13550 NONE
CXD79_RS13545 2779574 .. 2779585 -  -7.2  -3.72576   TGCTGCTGCAGGAAA                CGCG CGAG CGCG                 GCTACGCGGTGTGCG  64 326
CXD79_RS13535 NONE
CXD79_RS13530 2776441 .. 2776482 - -15.7  -2.52234   ACAAACGTCATGAAC GCGCATGGATGGCGGCGGC GCTG GCCGCCGGCAGCATTGCGC  TGGGCGGCGCCGTGC  69 493
CXD79_RS13510 NONE
CXD79_RS13505 NONE
CXD79_RS13500 2770769 .. 2770822 -  -5.2  -3.86897   GGCACGCGGCATAAA GGC-CGGCGTGGGCCTGGCGCAGCAT GGCG ATGG-ACGACAGGGCCACAGCGCGCC CGTGACCAGAACGGC  60 390
CXD79_RS13495 2770246 .. 2770297 -  -2.2  -4.59773   GGTGACGCTGAAAAA GCTGGACGGCTACGC-GCCGGTCCT GGTCG AGG-CCGCCCGCG-AGCTGTCGCGC CGTATTGGCGGCTGA  70 48
CXD79_RS13475 2764639 .. 2764655 - -10.8  -3.13403   CGGTGCCCACGAAGA              CGCGCC GGTCG GGCGCG              ATGATGTCCTGCACC  64 138
CXD79_RS13465 NONE
CXD79_RS13460 NONE
CXD79_RS13455 2760402 .. 2760421 -  -3.4   -3.5764   AACGCCAGTGGGAAA            CCCGCGCA GTGA TGTCCGGG             CTGTTCCACGACACG  51 510
CXD79_RS13435 2756861 .. 2756875 -  -2.7  -3.14881   GAATCGGGTCACGAA               GCTCC GGTCG GGCGC               GCGCCGCGCCTGTCG  44 4
CXD79_RS13430 NONE
CXD79_RS13425 2753030 .. 2753064 - -16.5  -2.53995   ATCCAGCTGAACTGA    CTGGTGTGCCTGTCCC CGCG GGGACAGGCAC-CCCG     TCATACGGGGGGCAG  77 61
CXD79_RS13410 2751381 .. 2751400 -  -4.8  -4.57073   CATCTGGTGGAAAAA            GGCCGCGC CCAT GCGCGCGC             GCAGCAACTCTACGC  72 359
        guaB 2745623 .. 2745660 - -22.2  -4.86731   CGGTTGGAAATAAAA   GCGCACCGGCCAGAACC TGGCC GGTTCTG-CCGGTGCGC   GATGCATTGCGTGAT 100 58
CXD79_RS13385 NONE
CXD79_RS13380 2743709 .. 2743725 -  -3.7  -4.12902   CAACTATTTGTAAAA              TATCTGA AAT TCAGCTA              TCAATCCACCGACTT  61 39
CXD79_RS13375 2743400 .. 2743410 -  -6.8  -3.16564   GCCCCATGTCACCAA                 TCCG CGT CGGA                 AGACCCTGCGGGACT  52 8
CXD79_RS13370 2741794 .. 2741844 -  -5.2  -3.75332   ATTCGCCAAGCCAAA GCCCAGGGCCAGCTCGCCGCCG ACACCAA CGAAGCCAGACTGGCCATGGAC CTGCTCGCCTACCAG  58 232
CXD79_RS13360 2739512 .. 2739534 -   -12  -3.58522   ATGACGATGCCGAAA           CTGGCCGG CGACAGC CCGGCCAG           CAAGCCCGGATTTGC  72 314
CXD79_RS13350 NONE
CXD79_RS13345 NONE
CXD79_RS13340 NONE
CXD79_RS13335 NONE
CXD79_RS13330 NONE
CXD79_RS13325 NONE
CXD79_RS13320 2731150 .. 2731171 -  -2.8  -2.74999   CAACCCGCAACAGGA           TCCGCGTC ATCCCG GGCGCGGC            GGCCGCCGACTGGCC  40 252
CXD79_RS13310 2729270 .. 2729283 -  -3.8  -3.64703   TCGCGGCCAGCGAAA               CAGC CGCCCT GCTG                GCCTCGCTGGCGCCC  54 440
CXD79_RS13295 2725763 .. 2725785 - -10.4  -2.81464   CGACCAGCCATGATA           CTGCGCGGCC CCT GCCCGCGCCG           CCGTCCTATTGCGTT  59 119
CXD79_RS13290 NONE
CXD79_RS13285 2724586 .. 2724624 -  -8.6  -2.70932   GGTTGCCGGCAAGCA   GGTGGCGCACGGACTGGC CGC GCGAGGCCTTGCGCCCGC   CTTGCGGCGGCCTAG  52 37
CXD79_RS13280 2723332 .. 2723346 -  -3.4  -3.35073   ATCATGGGCAAGGAA               GACGTG CTG CGCGCC               TCCAGGTCCGTCCCC  47 204
CXD79_RS13270 2721162 .. 2721208 - -14.5  -3.36273   CGGCCTGAAGATCAA CAACTCCGCGGCCGT-GCT-GCA AGC CGCCATCGACGGCCGCGGCGTTG CGCTGGCGCGCAGCG  79 298
CXD79_RS13260 2719620 .. 2719648 -  -2.4  -2.57931   GCCACCGCCGACAAT       GGCCACGCGCACGC TCA GCATGC-C-TGCCC       CTGGTCCACGGCCTG  38 11
CXD79_RS13255 NONE
CXD79_RS13250 2717423 .. 2717440 -  -5.5  -2.63596   GGTGATTGGACAGGA             CCGCG-GC CAG ACGCGCGG             ACTCAGTCTTGGTCG  44 28
CXD79_RS13245 2715761 .. 2715775 -  -9.2  -3.44146   CGCCGCGACAACGAA               CGCCGC CGC ACGGCG               CTGCTCGAGGCCATC  61 408
CXD79_RS13235 NONE
CXD79_RS13230 NONE
CXD79_RS13225 2712325 .. 2712337 -  -6.2  -3.31726   GGCCGTTATAGAACA                GCCG CGGAC CGGC                GCGCCCCCCCCCCCC  53 427
CXD79_RS13220 NONE
CXD79_RS13215 2709740 .. 2709761 -  -2.9  -2.94099   TCGCCTGACGAGATA           GGCCCACATG GTT CA-GCGCGCC           CCGCCGGTTTTCTCG  41 16
CXD79_RS13210 NONE
CXD79_RS13205 NONE
CXD79_RS13200 2706313 .. 2706333 -    -6  -3.53012   GCCGCCCCCCGCAAA            GGCCGCTG TCAGG CCACGGCC            GCCTCCCGCGCGCGG  56 13
CXD79_RS13195 2705103 .. 2705116 -  -3.7  -3.16647   TCCAGGCATGAAAAT               GCCAG GAAT CGGGC                CGGCTGCCCAGGGCA  45 85
CXD79_RS13190 NONE
CXD79_RS13185 2704125 .. 2704161 - -18.8  -2.70932   GGCCGGCGTCAACGA   GCGCGGCGCCGCGCTCGC CCC GCAAGCGCG-CGCC-CGC   CAGGCCATAGGCGGC  87 44
CXD79_RS13175 2702327 .. 2702341 -  -3.4  -3.57144   GGTTCCAGGCCGAAA               CCAGCG TGA CGGCGG               CGCTGCGCGAGCGCG  51 498
CXD79_RS13165 2700741 .. 2700751 -  -2.4  -2.80816   CCTGCAGGTAGCACA                 CCGG CGC CAGG                 GTCGAGGTGTTCTCG  40 310
CXD79_RS13155 2700426 .. 2700441 -  -3.2  -4.00066   TGGACAACTGACAAA              CGCTTT AACA ATAGCG               CGCCGATTGCGTCGC  58 98
CXD79_RS13150 2699230 .. 2699264 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 439
CXD79_RS13140 2697595 .. 2697632 -  -3.9  -3.56594   TGAAATTCGCCCAAA   GCCGGCC-CAACCCGCCG CTG CCCCAGGCCGCGGCCGCC   GACTATATGGGCACC  51 491
CXD79_RS13130 2695249 .. 2695262 -  -8.1  -3.28712   GGGCCTGGGCCACAA               GCACG GCAT CGTGC                TGGGCAACCTGGTCG  55 237
CXD79_RS13120 NONE
CXD79_RS13115 2693341 .. 2693359 -  -2.4   -2.8655   GCGAGGCATAGTAGA             TCTCCCTT ATC AAGCGAAA             GGCATCATCGCTTTC  40 16
CXD79_RS13110 2692920 .. 2692950 - -16.2  -4.09685   TTTGAGCCTTCAAAA       CGCAAACGGGGCCA TTA CAGCCCCGTTTGCA       GCGATCCGCGATGTA  95 50
CXD79_RS13105 NONE
CXD79_RS13100 NONE
CXD79_RS13095 2689096 .. 2689109 -  -2.3  -3.88137   ACAATTGCCGACAAA               GCGTA TCAC TCCGC                AGAGGCGGGGTCCGG  54 17
CXD79_RS13090 2688567 .. 2688596 - -15.8  -4.41047   AGCGCCCAAGGAAAA       CGCCGCC-GGTTC GCGAA GAACCAGGCGGCG       TCGCGGCCTGCCGTA 100 61
CXD79_RS13085 2688341 .. 2688375 -   -26  -3.45027   AGTCCCCACGAAAGA     CAAGGCCGTCAGTGAT GTG ATCACTGACGGCCTTG     GAACTACTGGTCGGG 100 33
CXD79_RS13075 2686226 .. 2686259 - -15.9  -3.14564   GCACGGGCCGAGGAA     GCGTGCCGGACTGCC CACG GGCAGCCCGGCGCGG      ACTACAGCTCCAGTT  78 27
CXD79_RS13065 2684657 .. 2684680 -  -8.8  -2.58892   AGGCAGATCAATTGA          GCGCCGCC TCGCGCAT GGCGGCAC           AGCCCCGCCCCGGCA  52 263
CXD79_RS13060 2684297 .. 2684320 - -14.6   -5.0925   TGCGAAAACGAAAAA          GGCCTGGCGA TGAA TCGCCAAGCC           TTTTTGATCTGGTTG 100 35
CXD79_RS13055 2683468 .. 2683513 - -12.7  -3.05844   TCGTGGACTTCAAGA CCCGCCGCATACAGCCGCGCA AGTACG TGCGCGGCCGTAT-CG-CGCG CATCCAGTTCTACAT  66 360
CXD79_RS13045 2682595 .. 2682625 - -10.4  -4.86621   ACGCCCAATGAAAAA      GCCGCCTTGGCGC CCTATC GCGGCA-GGCGGC       TGCGCACGGTGCGGC 100 59
CXD79_RS13040 NONE
CXD79_RS13035 2681604 .. 2681620 -  -7.3  -3.20348   GGGAGGAATACGGAA              TATACGC AAT GCGCATA              TTATTCGACCCCAAA  52 89
CXD79_RS13030 2680233 .. 2680291 -  -7.9  -4.07568   GCTGGGCGGGGAAAA GCGCGTCTGACGCGGGCTCGCGTGGCGC TGGC GCGCCACGCGATACGGC-TCAGTCCAGG CCGTGGAAGACGGAA  69 16
CXD79_RS13020 2678598 .. 2678618 -  -6.8  -3.40403   GCCCTTTCACTACAA           CCGCGCGCC GGTG GGCG-GCGA            AACCAGCCCGCCCGC  55 180
CXD79_RS13005 NONE
CXD79_RS13000 NONE
CXD79_RS12995 NONE
CXD79_RS12990 NONE
CXD79_RS12985 2672469 .. 2672479 -  -3.2  -3.05384   CCCCTGCGGACTCAA                 CCGA CCG TCGA                 GCGCCACAGGGCAAT  42 11
CXD79_RS12980 NONE
CXD79_RS12975 NONE
CXD79_RS12970 2668670 .. 2668684 -    -7  -5.15969   CCCCAAGGCAAAAAA               GCCTCC TCG GGGGGC               AGCAAGCCCGCATAG  93 161
        recA NONE
        recX 2662579 .. 2662625 -  -9.3  -3.33815   ACGGGCCGCAAGCAA GCCCCAGGCAGGCGG--GCCCGC ATC GCGCGCCGCCGCCCGCACGAAGC GGCATCGTTCAGTCG  61 34
CXD79_RS12935 2659026 .. 2659046 -  -6.7  -3.40403   TCCTGGGGAGTATAA            CGCAGCCGA TTG CCGGCGACG            CGGCCCGGGCCGACC  56 153
CXD79_RS12930 NONE
CXD79_RS12925 NONE
        sucD 2656244 .. 2656263 - -16.4  -5.78622   GCATGCGAAAAAAAA            CGGCCCGC GATC GCGGGCCG             TCCTGGGACAGGCGG 100 57
CXD79_RS12915 2655260 .. 2655302 - -23.5  -5.07652   GCGGCCAAAAGAAAA CGGGCTGGTCAG-CCCCGCC TGAA GGCGGGGCCCGAACAGCCCG CTATTGTAGTTCAGC 100 47
CXD79_RS12910 2654346 .. 2654379 -  -5.9  -4.03413   AGGGCGTCAGAGAAA     GCTGGAGACGATGAC CGAA GCCACCACCCCCAGG      ATGGCCAGCACGAAC  66 92
CXD79_RS12905 NONE
CXD79_RS12900 NONE
CXD79_RS12895 NONE
CXD79_RS12890 2649741 .. 2649758 -  -2.6  -4.23781   TTGATGAAAATGAAA             TCAGGC TTTGTC GCCGGA              CGCCGGGCCGGCGGA  62 8
CXD79_RS12885 2649107 .. 2649148 - -23.8   -4.2231   AAGCATGACGCAAAA CGGCGCGGATGCGAGCGGC TGCCT GCCG-TCGCTTCCGCGCCG CCGGCCGCCCCAGGC 100 53
CXD79_RS12880 NONE
CXD79_RS12875 2648084 .. 2648103 - -12.8  -5.07652   CGCGGCAAAAGAAAA            GCCCCCGG ATGA CCGAGGGC             TTGCATCATGCCGGC 100 50
CXD79_RS12870 NONE
CXD79_RS12865 2646160 .. 2646198 -   -11  -3.01712   CCTGCCGCGCCAAGA  TGGCGGTGCGCGG-GGCA GACGG CGCCGCCGCGG-CCGCCA  TGAACGCCGCGACCC  62 185
CXD79_RS12855 NONE
        cpaB NONE
CXD79_RS12845 NONE
CXD79_RS12840 2640409 .. 2640422 -  -8.1  -3.53012   GCCCGGCTCCTCAAA               CGTCG ATGG CGACG                ATGCGGCGGATCAGC  60 7
CXD79_RS12830 NONE
CXD79_RS12825 NONE
        folD 2637018 .. 2637032 -  -3.4  -3.75933   ATAGACGCGAGCAAA               TCCGCC GGC GGCGAT               TTCTCCGATCGCACG  55 187
CXD79_RS12800 NONE
CXD79_RS12795 NONE
CXD79_RS12790 2629281 .. 2629291 -  -6.8  -3.07816   GTGCGAGTTATCCAA                 GGAG ACG CTCC                 CGTTCGATATCGACG  51 7
CXD79_RS12785 NONE
        purU NONE
CXD79_RS12775 NONE
CXD79_RS12770 NONE
CXD79_RS12765 2624488 .. 2624509 - -14.5   -5.1287   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTTTTGCAT 100 53
CXD79_RS12755 2623090 .. 2623112 -  -9.8  -3.40403   GGCGCGCCAGGACAA           CGGCCTGTAC GAC ATGCAGGCCG           TACTGGGCCTGTAAG  65 76
CXD79_RS12740 2621154 .. 2621175 - -15.9  -6.10489   AACCGCAAAAAAAAA           CCTCCAGGC TTGC GCCTGGAGG            CAGGGTTGGTAGAGC 100 48
        hrcA 2617374 .. 2617391 -  -5.5  -3.54382   GCGAAGAAACACGAA             GACACCT CTCA AGGCGCC              GCCCCGCGCGCAGGC  54 62
CXD79_RS12720 2616240 .. 2616257 -  -8.3  -2.52676   CATTCGCGGAATGGA             CCGGCGC GCTC GCGCCCG              CCGCTTCAACCACAG  51 50
CXD79_RS12715 2615904 .. 2615929 -  -3.8  -5.52384   TTTCCAGGAAAAAAA         GCCCGGCTCC CATGAC GCCGCCGGAC          GGCGCGTCGCCGCCC  90 54
        grpE 2615240 .. 2615284 -  -5.6  -3.05384   CTCGGCGGGATCGAA TGG-G-GCGGCGGCCATGCCTG CTT CAGCCCTGGCCGGCGGACACCA CGACCAGCGCCGGAC  47 3
CXD79_RS12705 2614826 .. 2614844 -    -3  -2.78725   ATACGGTAGGAATCA             GGGTTTGA AAC TCAGTCCC             CCAGTAACTGGAGTT  40 55
        dnaK 2612799 .. 2612841 - -18.5  -3.27298   GTTCTGAATCATCAA CGCG-CGCGCCCGGTAGCTG GAAT CAGCTACCGGGCGTATCGCA CGTCATCGTTCGGCC  93 42
        dnaJ 2611527 .. 2611556 - -22.3  -2.88249   GACATCCGCGACAGA       GTGTGCCTGTCCC CGCT GGGACAGGCACAC        TGCTCTACGCCATGA 100 93
CXD79_RS12685 NONE
CXD79_RS12680 2607225 .. 2607256 -  -7.9  -3.85864   CGAGCACTACAACAA      GGAGGCCGGCGCGG TCTGG CTGCGCCGGC-TGC      TCGACGCCTGGCCCA  67 187
CXD79_RS12660 NONE
CXD79_RS12655 2603358 .. 2603386 - -16.7  -4.38712   CCGAGCGCTAGAAAA        GGAAAAGCCCCCG GAT CGGGGGCTTGCCC        GGCGCCGCTTACTGG 100 34
CXD79_RS12645 2601410 .. 2601434 - -11.4  -5.02074   CCATTCGGCAAAAAA         CCCGCTACCCC CATA GGGGC-GCGGG          TTTCTCGGCTGATGC 100 60
CXD79_RS12640 2600215 .. 2600232 -  -3.3  -2.74864   TGTAGAAGCAAATAC             CGGACCG GCCT CAACCCG              AAACGGAATCCCACA  40 83
CXD79_RS12635 2598854 .. 2598864 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS12630 2597460 .. 2597482 -  -7.6  -3.17212   CGACTACCTGACCAA           GCCGTTCGGC GTC GGCGAACTGC           TGGCGCGCCTGCGCG  53 393
CXD79_RS12595 NONE
CXD79_RS12590 2586421 .. 2586455 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS12560 NONE
        lolA 2579445 .. 2579465 -  -3.3  -3.05596   CACGGGCGGATCCAA           CG-CGCAT TACACC ATGCGGCG            GCCTTGGCCCGCAGG  42 74
CXD79_RS12550 NONE
CXD79_RS12545 2576624 .. 2576641 - -11.3  -4.98531   CGCCGAAATGAAAAA             CGGAACC CGCG GGTTCCG              TTTCTGGTTCACGTG 100 54
CXD79_RS12540 2575984 .. 2576001 - -14.1  -4.95957   CAAATCAATGAAAAA             GCCGCCC GGAT GGGCGGC              CTTTTTTTGCGGCAC 100 167
CXD79_RS12525 2574580 .. 2574593 -  -9.5  -3.28791   ACGGCTGGCGCATAA               CGGCC CGCG GGCCG                GTCAGCCTTCCTGGC  61 27
CXD79_RS12515 2572931 .. 2572952 -  -7.3  -2.78463   AGGCGCTGCAGCAGA           TCACGC-CCA GCA TGGCGCGCGA           GATGGTGTTCTTCCC  49 352
CXD79_RS12460 2559769 .. 2559817 -  -6.6  -2.70932   CGCCGCCGGCAATGA TGGCACGGATCCGTGACCGGGC GCGGTCA GCCCGGGC-CGGA-CCGCTCCT CGTTGTCCGCGGCGG  47 3
CXD79_RS12455 2558879 .. 2558889 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS12450 NONE
        yaaA 2557037 .. 2557074 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
CXD79_RS12440 2555339 .. 2555353 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  61 494
CXD79_RS12430 NONE
CXD79_RS12425 2551761 .. 2551795 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        thrS NONE
CXD79_RS12395 2546471 .. 2546507 - -19.3  -3.05463   ACGGGCCGCACGCAA    GCCGGCCCGGACGCCCC TCG AGGGCAACCGGGCCGGG    GATGGGATCAGCCTG 100 33
CXD79_RS12390 2545402 .. 2545415 -  -3.1  -2.87243   GCACGACGATAACGA               TGCCA GTCA TAGCA                GCAAGTTCAGCCGGC  41 32
CXD79_RS12385 NONE
CXD79_RS12380 2544585 .. 2544611 - -10.8  -2.62735   AGAGCGCGTAGACGA         TGCAGCCCGC GCCGACG GCGGGCTGCC         GGAACCTGAGGTTTT  59 42
        ptsP 2542773 .. 2542790 - -10.5  -5.64006   ATGCAACGAAAAAAA             CGGCGCC GCAA GGCACCG              TTTTGCCGTGCCACC 100 47
CXD79_RS12360 NONE
CXD79_RS12355 2539607 .. 2539625 -   -16  -5.31275   TTTGACGACAAAAAA             GGCAGGCC CAA GGCCTGCC             CGCATTGCCGCGCCC 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
CXD79_RS12335 2536457 .. 2536467 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS12330 2535173 .. 2535213 -  -5.9  -3.29144   CTACGTCGCCCACAA  GGCGCCGTGGCACGACATC ACG GATGACCTCCCGCGGCATC  CCGAGGGCCGCCCCG  53 265
CXD79_RS12295 2529264 .. 2529279 -  -7.5  -2.71011   ATCCCTTCGCAATCA              GCGCG GGACGG CGCGC               CGGTCCCTGTTCCGC  51 7
CXD79_RS12290 2527994 .. 2528013 -   -15  -5.15634   GAGGCCATGAAAAAA            CCGGACGC TCGC GCGTCCGG             TTTTCCATGCGGGCG 100 72
CXD79_RS12280 2526376 .. 2526402 - -17.3  -5.26875   CCTCCAATGAAAAAA        GCCCGCGCGCCC CGAA GGGCG-GCGGGC         CTGGACGGCGCCGGC 100 46
CXD79_RS12275 NONE
CXD79_RS12270 NONE
CXD79_RS12265 2525449 .. 2525467 -  -4.4  -2.77523   TGCGCAGGAAGATCA             TGGCGGAC TCA GAGCGCCA             GCGGCAAGGGCACGG  43 15
CXD79_RS12260 2524849 .. 2524866 -  -9.1  -3.41836   ATAGGGATGGAAAGA             CGGCCCGC CAG GCG-GCCG             CGAATCGGCTATTTT  63 129
        purE NONE
CXD79_RS12250 2523109 .. 2523123 -  -3.4  -2.60075   GCGGCGGGAATCAAT               GCGTCA GAG CGGCGC               GGCCATGCCCAGCGC  39 14
CXD79_RS12245 2522008 .. 2522024 -  -7.2  -2.62184   GTCCGCGTGAGATTA              CGCCCG GCCGG CAGGCG              CGGCAATCAGGAGTT  47 56
CXD79_RS12240 2520847 .. 2520884 - -10.5  -3.06162   TAGCGTACCGCAATA   CGGGACAGGC-GTATCGC TTG GCGATCTTGCCCGCCCCG   CCGCCCTCGCCCTAG  60 37
CXD79_RS12235 2519925 .. 2519943 -  -5.9  -3.62518   CGAAAGATCCGGAAA             GCTAGGG TATTC CCCTTGC             TCTCCCATCAAATAC  59 50
CXD79_RS12230 NONE
CXD79_RS12225 NONE
CXD79_RS12220 NONE
CXD79_RS12215 2516532 .. 2516555 - -19.6  -2.75064   CCGGCCATGGAACCA          CTGCCGCGCG GGCG CGCGCGGCAG           GCCGGGCTCAACCCA  93 33
CXD79_RS12210 2514815 .. 2514845 -    -9  -3.89956   GCAGGATAGACCAAA      CG-CGCCGCCCGCG TGTTG CGCG-GCGGCATCG      CGCCCGGCGTGCCGG  73 55
CXD79_RS12205 2514162 .. 2514201 - -12.1  -3.73072   AAGCCTTCTACTAAA  CCCCGCGTGCCTGTCCCC GCAAG GGGGACTGGCAC-CGGCA  AACTTCCCCGCGTGC  77 122
CXD79_RS12190 NONE
        xerD NONE
        ybaK 2508579 .. 2508601 -  -9.1  -2.94144   TCTCCATGGAAAGGA          GCCGGC-CGC CGTA ACGCGCCGGC           CTGGTCATGCGACGA  56 100
CXD79_RS12175 2507991 .. 2508005 -  -5.6  -3.57144   GGGGTCAGTGCGAAA               TGCGGG TGC CCAGCA               CCGCCAGGAACTGCG  54 0
CXD79_RS12170 2507461 .. 2507471 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS12165 2505979 .. 2505997 -    -3  -4.07885   GATGTCCTCGGAAAA             CCGCGC CGCCCAC GCGCTG             GGCCGCAACTATCCG  58 485
CXD79_RS12150 2503273 .. 2503287 -  -9.2  -3.28712   GCGCGCGGCCTAGAA               GCCGCA CAG CGCGGC               GATGTTTTCCCAGTT  61 187
CXD79_RS12145 NONE
CXD79_RS12140 2496614 .. 2496672 - -24.1  -2.71731   TTCACCGCCGAACCA TGCGAAGGGGCCCGCCAGCTACGCATTCT AAC AGAATGCGTAGCTGGCGAGCCCCGGC-C- CGACCGGACCCATCA 100 521
         ffs 2496468 .. 2496503 - -10.7  -2.70932   GGGGCGCCGCAACCA   GGAATG-AT-GCGATCC GCCT GGATCGCGATACATTCC    GGTCACGGCGCCCCT  60 54
CXD79_RS12130 NONE
CXD79_RS12125 2493865 .. 2493899 - -13.5   -2.6927   ATCGCGCAGACAGCA    GCGCGCCCGGCGGCCC GGCT GGGCCGCCAAG-GCGA     TATCAGAACGGCAGC  67 28
        recR 2493198 .. 2493208 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS12115 2491976 .. 2492005 -  -2.7  -4.13767   TGTCGGATGTGAAAA       TGGCCGATGCGCGC AAC GCCCGCCT-GGTCA       TACTCGAGGACGGCG  61 214
CXD79_RS12095 2488923 .. 2488957 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS12055 2481237 .. 2481289 -   -11  -3.28791   ATTTGCCGGGGATAA CATCGGGCGG-TGCCCGGCGGCGCC TTGC GGCCCCGCCGGATGGCCGCGCGGCG CAGCATGCCTGCGCG  66 298
        mutS NONE
CXD79_RS12040 2476339 .. 2476360 - -15.9   -4.4078   TTCGCGCAATGAAAA           TGGCCTCCG TTAC CGGAGGCCA            TTAGCATGCCTGCCC 100 520
CXD79_RS12035 2475534 .. 2475557 - -18.2  -5.40474   AGCGGCGCAAAAAAA          CCGGCAAGCC GCAA GGCTTGCCGG           TTTTTTTTGGCCTGG 100 50
CXD79_RS12015 NONE
        glnH NONE
        glnP NONE
        glnQ 2469058 .. 2469079 -  -8.8  -3.05844   CGGCCGACGCCAATA           TCGTGCAT GTCACG ATGCACGA            CGACGCGGTTTCCAC  55 165
CXD79_RS11970 2463246 .. 2463257 -  -4.4  -3.35679   GGCCGCCAGCGAGAA                CTGA AACC TCAG                 CCGCGTCCCACGAAC  51 22
CXD79_RS11960 2460489 .. 2460499 -  -3.2  -3.89614   GCCAAGGGCGACAAA                 GCCA ATC TGAC                 CAAAGCCGAGCGTAA  58 441
CXD79_RS11935 2457710 .. 2457736 - -12.2  -3.05384   GCCGGCCTCACCGAA         TTCGACGCCGCC CCG GGCGACGCCGAG         GTGGCGGCGCTGCGC  66 492
CXD79_RS11925 2455443 .. 2455459 -  -6.5   -4.8083   CAACAGCACGAAAAA              TGCCAGC GTG GCCGACA              GCGCGGCCGCAAGTT  82 139
        rdgB 2451306 .. 2451316 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS11905 NONE
CXD79_RS11900 2448930 .. 2448952 -  -7.6  -4.16842   CCGACTGGCAATAAA           CAGGCAAGCA AAA TGCGTGCCAG           GTCCCGCACTCCTGG  74 133
        glnA 2447408 .. 2447460 - -22.1  -3.11634   CGTCATAGGAGGCAA CCGGGACG--GCGCGGCGGGCGGGCC GCGA GGCCCGC-CGCCGCACAGCCTCCCGG ATTACAGGCTGTAGT 100 27
CXD79_RS11890 NONE
        ntrC NONE
CXD79_RS11875 2443002 .. 2443024 - -11.9  -4.56597   CGCGCCGTGGAAAAA           TGGGCGCCG GCTGG CGGCGCCCG           TCTCACTTTACGGCA 100 33
CXD79_RS11870 2441826 .. 2441860 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 214
CXD79_RS11845 2436204 .. 2436217 -  -9.5  -5.27335   GCGGCCAAAGAAAAA               CCGCC CGAA GGCGG                CTTTTCCTGGCGGCG 100 48
        dkgB 2432706 .. 2432723 -  -2.6  -3.65351   CCAGCGTCAGCGAAA             CGCCGG TCTTGT CCAGCA              ATACGCCCACCCCTC  51 478
CXD79_RS11820 NONE
        recG NONE
CXD79_RS11810 2426926 .. 2426952 -  -9.4  -3.14132   CGCGTGGTCGAGCAA        GCCCTGGCCGA GCATTT CCGGCC-GGGC         TTCGCCACGCCGGCC  59 58
        mmsA 2424385 .. 2424414 - -18.6  -2.67316   GAACGCAACAAGGCA       GC-CCGGCGCGGC GCCCG GCCGCGCCGGCGC       GCGCTCAGCCCGAAC  87 30
CXD79_RS11795 2423777 .. 2423798 - -15.9   -5.4505   CCCGGCAAGAAAAAA           GCCGGCATC TCTC GATGCCGGC            TTTTCTTCTGCGCGC 100 47
CXD79_RS11770 NONE
CXD79_RS11765 NONE
CXD79_RS11760 NONE
CXD79_RS11755 NONE
CXD79_RS11750 NONE
CXD79_RS11745 NONE
        tviB NONE
        tviC 2408424 .. 2408474 -  -2.7  -3.07816   CCGTCAGGTACGGAA TACGCGCGATGCCTGACGAATGA AGCTCGA TCAT-CG-CAGGAATTGCGTGTA CCAGGGCATGGCGGC  42 5
CXD79_RS11730 2406371 .. 2406389 -  -5.2  -3.13403   CGCCCTGCAGGAACA             GGAACGAG GCG CTCATGCC             ATGCTCCGGCTCATC  49 36
CXD79_RS11725 2405183 .. 2405193 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD79_RS11720 NONE
CXD79_RS11715 NONE
CXD79_RS11710 2401598 .. 2401632 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS11645 NONE
CXD79_RS11640 2388208 .. 2388244 - -11.4  -3.01712   CGCTGGCCGCGAACA    GGCGCGCCAGCGCCGG CGCGT CCAGCGCCCGCACGAC    GGCATCGGGCGCATA  65 427
CXD79_RS11630 NONE
CXD79_RS11625 NONE
CXD79_RS11620 NONE
CXD79_RS11615 NONE
CXD79_RS11610 2381569 .. 2381595 - -22.3  -3.05384   GCGTGCGCGACGCAA         GCGGGCGCGGG GCCCG CCCGCGCCCGC         CCGCGCCTACTTGCC 100 32
CXD79_RS11595 2378834 .. 2378881 -  -5.4  -2.73468   CAATATCCTCAAGCA TGCGCGAGCGCGCCGCCTGAC CGTGAGC ACCCGGCTG-GAGCCCGCGCA CGCGGTCATCGCCGT  43 191
CXD79_RS11580 2373046 .. 2373066 -  -8.2  -3.34895   GCCAGCCTGAAGCAA            GCCGTGGC CATTC GCCAAGGC            AAGATGCCGCCATCG  59 267
CXD79_RS11560 2370902 .. 2370940 - -10.1  -3.65351   GCACCGTCATGGAAA  TCGCGACGGCGGCGGTCC ATGC GGG-CGCCGCCGCCCCGG   CGCTCAGACCGGTTC  67 29
CXD79_RS11530 NONE
CXD79_RS11525 2364227 .. 2364244 -  -6.3  -2.62184   TGGCGTGTCAGAGCA             TCA-CGGC GCC GCCGTTGA             TGTCGAGCACGGCGC  46 0
CXD79_RS11520 2362803 .. 2362817 - -12.8  -4.15044   GCGCGCCTGAAGAAA               CCGGGC TAC GCCCGG               CTGGCGCAGTGCGAC  86 383
CXD79_RS11510 2360858 .. 2360873 -  -5.4  -3.67597   GCTCCCAGGGAACAA              GGCCCTG CGG CAGG-CC              GGCCGGCACCGACTG  57 286
CXD79_RS11500 2359104 .. 2359138 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS11460 NONE
CXD79_RS11455 2351563 .. 2351575 -  -4.8  -3.01712   CGCGGGGGTGGAAGA                CTGG GCGCG CCAG                CACGATATCGTACTG  46 363
CXD79_RS11445 2350543 .. 2350553 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS11440 2349011 .. 2349066 - -11.7  -4.07568   GGTCGTGGTGGAAAA CCGCGGCGGCGGCGG-CGGCGCGATCG GCGC CGA-CGCGCTGGCCAAGGCCACCCCGG ACGGCTATACGCTGG  82 498
CXD79_RS11430 2345441 .. 2345454 -  -2.3  -3.01918   CCAGGGCATAAACGA               CTTCC ATCA GGCAG                GACTCCCGGTTTGCG  41 18
CXD79_RS11425 NONE
CXD79_RS11420 NONE
CXD79_RS11415 NONE
CXD79_RS11410 NONE
CXD79_RS11405 2342296 .. 2342306 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 117
CXD79_RS11400 2341234 .. 2341259 -  -8.2  -2.70932   TCGCTCCTTGAAGTA         GGCGGC-GGCC GTCAT GGCCTGCCGCT         GACCTTTCTACCATA  52 58
CXD79_RS11395 2340626 .. 2340641 -  -4.6  -2.84454   ATAAAGGACTTAAAG              GGTCGG ACAG CCGACA               TTTTGCCTGAATGCG  44 90
CXD79_RS11390 NONE
        tadA NONE
CXD79_RS11380 2338215 .. 2338261 -    -7  -4.56597   TCTTTCCTGGAAAAA CGCCAGCCCGCCTGGGTGCCCC GGC AGGACACGTAGCGGGGCCTGCG TTCAGTGGGTGTGCT  77 27
CXD79_RS11355 2331606 .. 2331649 - -12.2  -3.28924   TACCTGTCGTTATAA GCATGCCGCGGGCGGCGCGGC CAG GCCGCGC-GCGGGCGCCCCGC TTACGCCTCGATGCC  71 26
CXD79_RS11350 2330663 .. 2330686 - -17.4  -2.61695   GGGATCGGCAAATAG          GCCGCGGGCC GGCG GGCCCGCGAC           ACGGTATCGGTATGA  80 57
CXD79_RS11345 NONE
CXD79_RS11340 2328838 .. 2328860 - -11.9  -3.15544   GGTCATGGCGATGAA           GGCGCGGGC GCCAG GCCCGCGCG           TGGTTCAGACGTATT  66 30
CXD79_RS11330 NONE
CXD79_RS11305 2320468 .. 2320498 -  -5.2  -3.14602   TCTAGTCGACCAAGA       CCGGACGCGCTCCC TAG GGGAGCAGGCGCGC       CTTGACCTGCTGCGA  49 8
        mltG NONE
CXD79_RS11285 2316545 .. 2316564 -  -2.8  -3.16564   CTGCCAGGGCAGGAA            GCGAC-CGA GGC TCATGCCGC            TTGCGCCACCAGCTC  44 17
        holB 2315489 .. 2315502 -  -9.5  -4.03078   GGATCACAGGAGAAA               CGGGC CGTG GCCCG                ATCGTCACTGGCAGG  75 30
CXD79_RS11275 NONE
CXD79_RS11270 2313712 .. 2313731 -   -15  -5.52384   CCCCGAGCAAAAAAA            TGCCGCCC CGGT GGGCGGCA             CGTGATCAGGTGGAG 100 94
CXD79_RS11265 2312833 .. 2312850 -  -5.6  -4.67982   TTGGAGTGAAGAAAA             CCGTAT GGATGG ATACGG              CCACAGGGATACATC  77 39
CXD79_RS11260 2311867 .. 2311882 -  -2.5  -3.90744   CGTGCCGCGAAAGAA              CAGCA GGTATA CGCTG               CACAGGTTGTAGATG  56 189
CXD79_RS11250 2310480 .. 2310536 -  -7.3  -3.65902   GGCATCGCAGGCAAA GCCCAGCACCGCGGCGTCGCCGGCGCCGG CGT CCTGCCCCAGCG-CG--ACGATG-TGGGC CAGGCGGCGCGTATC  61 100
CXD79_RS11240 2308113 .. 2308141 - -19.6  -3.04398   GCCTGCGCTGAAAAC       GGC-GCCGGCCCC TTGC GGGGCCGGCTGCC        TGGTACGCCGATGCG 100 68
CXD79_RS11160 NONE
CXD79_RS11155 2292484 .. 2292500 -  -2.9  -3.71645   AACGTCATATTGAAA              TGGACCG ATG CCATCCA              AGCCATAGGATACAA  53 98
CXD79_RS11150 2291392 .. 2291416 -  -6.3  -5.24129   GCGCTGGAGAAAAAA          GCGCAAGGCCA GGC TGGCCCCTCAC          CCGAAATCGACGGCC  93 173
CXD79_RS11135 2275922 .. 2275945 -    -3  -3.40403   GCCGGCGCATGAGAA          CCCTGCGAAT CCCC ATGCGCCGAG           CCGGCGGCAGGCCGC  48 47
CXD79_RS11130 2275384 .. 2275394 -  -3.2  -4.45261   GAAAGAAATGGAAAA                 CAAG AAT CTCG                 TGACAAGCCGACCAT  69 85
CXD79_RS11125 NONE
CXD79_RS11120 2271757 .. 2271788 -    -3   -3.9941   CCCCGCAGAAGGAAA     TTACGCGCGCGGGC ACGGCG GCCCG-GCG-GTCA      GCGAATATCTGGCTC  58 23
CXD79_RS11115 NONE
CXD79_RS11110 2268892 .. 2268907 -  -4.6  -2.78384   GGCTGCCGCAGCACA              TGACGC TGTA GCGTCG               CGGCCGCGTTCTCGC  43 46
CXD79_RS11065 2260650 .. 2260678 - -14.6   -3.6106   CGTAACAGGGGGAAA       GGC-CGCGCCCCGC CCA GCGGG-CGCGCGCC       GATGCATGATGGATT  81 40
CXD79_RS11060 2256896 .. 2256953 - -16.2  -2.71712   CGCCTTGTTCGAAAT GCGCGATGGCGGGCTGACCCTGCAGGT GCATG ACCGGCGCGACCAGCCCGCCTT-GCGC GTGACGGTGTGCCCG  77 63
CXD79_RS11045 2253735 .. 2253781 -  -8.6  -4.18018   CCGCCTGATCGAAAA CACGCGCGCGCGCGGCTACTC GGTGGT GGGCAACCACGCG-GTGCGCG GCGCGCTGGGCGTGG  75 197
CXD79_RS11035 2251982 .. 2251999 - -12.7  -4.19735   GGCTCCAAAAGCAAA             GACGCCC TCGC GGGCGTC              TTCTTCACGCTCGAG  91 53
CXD79_RS11025 2250070 .. 2250083 -  -9.5  -2.81966   GGAAATGCCATGACA               CGCCG GTGA CGGCG                CGCGGCCGCGCATCC  56 85
CXD79_RS11020 NONE
CXD79_RS11015 2247513 .. 2247538 - -19.1  -4.56597   CCGCGCCGGGAAAAA         GAGCCTGTCCC CGTC GGGACAGGCTC          TTTTCATTTGGCGTA 100 29
CXD79_RS10995 NONE
CXD79_RS10990 NONE
CXD79_RS10985 2241833 .. 2241843 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS10980 NONE
        tilS 2239654 .. 2239676 -    -9  -3.28924   TACTCTGGCTGACAA           GCCCGCATAG GGT CTGGGCGGGC           AAAGCTGAGTATTTT  61 83
CXD79_RS10970 NONE
CXD79_RS10965 2238159 .. 2238180 - -14.5  -5.45802   GCCGCAAAAGAAAAA           GGCCCTTGA TTGC TCAAGGGCC            TTTTTGATCTTTGGC 100 37
CXD79_RS10955 NONE
CXD79_RS10950 NONE
CXD79_RS10945 NONE
CXD79_RS10940 NONE
CXD79_RS10935 NONE
CXD79_RS10930 NONE
CXD79_RS10925 NONE
CXD79_RS10920 NONE
CXD79_RS10915 NONE
CXD79_RS10910 2228428 .. 2228438 -  -2.4  -2.66316   TGGTGCACGACATCA                 CCCC GTC GGTG                 TCCACGCTCAATGAA  38 477
CXD79_RS10900 2226271 .. 2226313 -  -8.2  -3.25073   GGCGCAACAGGAACA CCGGCCGGCCGGGCGC-CG CCTGTT CGAGCGCCTGGCGCGCGGG ATAGCCGCCGCTGTG  58 408
CXD79_RS10890 2224214 .. 2224236 - -10.6  -2.70932   CGCCGCGGCGAACCA           CCATGAGGGT CGC ACGCTCATGG           CGCACCGAACAGCGA  60 20
CXD79_RS10885 NONE
CXD79_RS10880 2222307 .. 2222323 -  -5.1  -4.12198   TACAAGGTTGTAAAA              CAGGC GCCGCCG GCCTG              CCCGCCTGTAAGGGA  64 45
CXD79_RS10875 2222100 .. 2222127 - -18.6  -5.04385   GACAGGCGCAAAAAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTCGGTACTGCTTGC 100 83
CXD79_RS10830 NONE
CXD79_RS10825 2213447 .. 2213467 -  -4.5  -3.19157   GACGAAGCGGACGAA            CTGGCCGCC TGG AGCGGGCCG            CCCATGCAGCGGCAA  47 99
CXD79_RS10800 2207118 .. 2207131 -  -9.5  -3.53091   AGCCGGCTTTTCAAA               CCGCC CGGC GGCGG                GTGCGGCGATACAGG  64 7
CXD79_RS10795 2206951 .. 2206975 - -17.2  -4.98531   CGCCCAAAGCAAAAA          GCCGCCATGC ACAAG GCATGGCGGC          TTTTCATATTGGCGC 100 35
CXD79_RS10790 2206246 .. 2206265 -    -5  -4.20696   CGACCAAGCCGAAAA            TTAGAGCG TTGA CGCTTTAA             TTCGCCTAGTATTTT  66 43
CXD79_RS10785 NONE
CXD79_RS10780 2203599 .. 2203624 -  -3.3  -3.61517   ATTTCGCGCGAATAA        TGGCCGTCGCC GGTTCA GGCG-C-GCCA         GCGGCGGTAGCCGCA  49 82
CXD79_RS10775 NONE
CXD79_RS10770 2200451 .. 2200465 -  -3.4  -3.96051   ACAGAACAGATGAAA               CATGGC GTA GCCTCG               TTGATGATGCCGCGC  58 131
CXD79_RS10765 2199391 .. 2199419 - -15.2  -3.53012   CGCCTGCTCCGGAAA        GCGCGCCCGGCC GCCGG GGCCGGGCAAGC        GGGATGGTTGCGCCC  81 41
CXD79_RS10760 NONE
CXD79_RS10755 2197271 .. 2197319 - -18.2  -2.90075   GCCCGGGGAACGACA CCTGCGGCAAGGGTGCCTGTCCC CGCA GGGACAGGCACCCTAGG-GCACG ACCTCGGCCAGCACC  86 16
CXD79_RS10725 2188563 .. 2188591 - -10.1  -3.06915   AGGTAGGCGACCGAA        GCCACCACGCCGC CAT GCGGCGCGCCCGC        GGCCTGAACGTTCTG  60 125
CXD79_RS10720 NONE
CXD79_RS10715 2187075 .. 2187094 -  -4.2    -3.889   CGCAAGGATAGCAAA            GGC-CGGCG AGC CGCCATACC            CCGGGATGCCCGTAT  57 62
CXD79_RS10710 NONE
CXD79_RS10705 NONE
CXD79_RS10700 NONE
CXD79_RS10695 2180629 .. 2180683 - -15.7  -2.71364   GGACTTCGTCAACGA TTGACGGTTGGCACGGTGCCTGTCCC CACG GGGACAGGCACCGCATCC-CCGCCTA CTCGTTCTCCGCCCC  75 23
CXD79_RS10685 2179019 .. 2179030 -  -7.2  -4.59773   CTTGAGCCCGAAAAA                GCGG AGCG CCGC                 CATGCTGGATATAGA  79 84
CXD79_RS10665 NONE
CXD79_RS10660 NONE
CXD79_RS10655 NONE
CXD79_RS10650 2172934 .. 2172950 -    -3  -2.78679   CGCCGGGACGGAAAG              GAAATG GCGCG CATCTC              AGGCCCCCTCGCCCG  40 24
CXD79_RS10645 NONE
        cpaB 2171539 .. 2171553 -  -3.5  -3.01791   AGCTGTTCGTCAATA               GCGCA CTGCC TGCAC               GTCGCCGCCGCGCAC  44 5
CXD79_RS10635 NONE
CXD79_RS10630 2168726 .. 2168749 - -12.4  -3.16564   TTCGGACGCGATGAA          TTCGCCGCCG CCCG CGGCGCCGAA           TTCCATGGATGGCGG  69 58
CXD79_RS10620 NONE
CXD79_RS10615 NONE
CXD79_RS10610 NONE
CXD79_RS10600 NONE
CXD79_RS10595 2160566 .. 2160602 -  -4.4  -3.04398   GCGGTTTCGTAAAAC   CCGTGGCCCAACCCG GCCGGTTA CGGATCGG-CCACGC    CATCGGCCGTTTCGG  45 9
CXD79_RS10590 2159747 .. 2159762 -  -3.2  -3.83318   CCGGCAATAATACAA              GCGTAG CCGC CTATGC               CCCGCCCCGCCATAC  56 74
CXD79_RS10585 NONE
CXD79_RS10580 2158376 .. 2158402 - -11.5  -3.65351   CGAGCTGGACGGAAA        TGCCGGC-CCGC GGCC GCGGCGCCGGCG         AACCGGCGCCGGACC  75 105
CXD79_RS10575 2157778 .. 2157790 -  -2.6  -3.29471   CGTTCATGATACGAA                GGCC GAAGG GACC                GGGGGCTCGCCCAGC  44 1
CXD79_RS10570 2157270 .. 2157289 - -16.4  -3.75629   CAGGCGCAACCGAAA            CGGGCCGC ATGC GCGGCCCG             TTTTTTTTGCCCCGG  88 95
CXD79_RS10550 2152965 .. 2152977 -  -7.7  -2.71144   CATCGTGGGCAACGA                GACGT TCG ACGTC                ACGGGCCTGGAGGGC  49 311
CXD79_RS10535 2146995 .. 2147020 -  -4.7  -3.06696   TTGCGTTTCAAGACA         TGCAGGACGTGA ACC CCA-GTCCTGCG         CCAGGCGAGCATTGC  45 133
CXD79_RS10530 2145951 .. 2145985 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 271
CXD79_RS10500 NONE
CXD79_RS10495 2139801 .. 2139820 -  -9.2  -2.72344   GCCGATTTCGAAGCA            GGCGTGGC GCAG GCCAGGCC             GCTGTTCATGCGCGC  52 243
CXD79_RS10485 2139306 .. 2139324 -  -4.4  -3.66018   GGAGGATGGGAAGAA             TCAGTCGG GCA CCGGCTGG             CTGGCCTGTTCACCC  55 7
CXD79_RS10480 NONE
CXD79_RS10475 2137201 .. 2137247 -  -7.2  -3.55444   CTCCGATTCCGTAAA GCGACGGAACACGCTCGCCGAT TTCCG ACCGGCAGGCG-GA-CCGCCGC CTGGCTCCCCTTTGT  58 339
CXD79_RS10470 2136455 .. 2136489 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 262
CXD79_RS10450 2132591 .. 2132624 - -15.9  -2.70932   GCGCCGCTTCAAGGA     CGACGAGGCGGACGC GCCG GCGCCGGCCACGTCG      GCCGCGGCCGCGCGC  75 93
CXD79_RS10435 2129957 .. 2130013 -  -7.2  -4.64334   AACGCCGCAACAAAA CCCTGGTTGGCG-GCGGCTGCCCCGCC TTGCGC GG-GGGGCCGCCGCGCGTGGAC-AGGG CCGCACGCGCCTTGC  79 173
CXD79_RS10430 NONE
CXD79_RS10425 NONE
CXD79_RS10420 2127372 .. 2127410 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD79_RS10415 2124137 .. 2124147 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 2123928 .. 2123962 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD79_RS10390 2120010 .. 2120032 -  -4.7  -2.70932   GCGCCGCGCCAACGA           GGAGCTGCG CCACC CGCTGCTGC           AGCATCGGCCGTTCA  43 296
CXD79_RS10345 2111545 .. 2111555 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 180
CXD79_RS10340 2110496 .. 2110506 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS10335 2109308 .. 2109347 -  -8.4  -3.60098   AGGCGCTAGCGTAAA  CCCATG-GCCGCGCACGCG CAA CGCGCGGGCGACTCCTGTG  TTTGCCACGGCGCTT  62 170
CXD79_RS10330 2107037 .. 2107050 -  -5.9  -3.82824   CACGATCGACAAGAA               CGGCA TCGA CGCCG                TCCTGGCCGACCTGC  63 408
CXD79_RS10305 2102769 .. 2102823 - -11.8  -3.84712   CAATTGGAGATGAAA TGATTTGCGACGGCCGACCCCGGCGC ATG GCGCCGGGGTCGGCGGCATCCTAGCT GTGAACTGTCAATAG  79 20
CXD79_RS10300 2101233 .. 2101245 -  -4.7  -2.71712   CGCGGCCCGGGAAAG                GGCCG CTC CGGCG                TACGGGGCCGGCGAC  43 145
CXD79_RS10295 NONE
CXD79_RS10290 2099004 .. 2099023 - -11.4  -4.11692   GAGCGATTGGGAAAA            CGGCCACC CACT GGTGACCG             TCTTCCATCATATCG  82 78
CXD79_RS10285 2098579 .. 2098594 -    -6  -2.83112   ATGCAATCGATCATA              CCGCCG CTCG CCGCGG               CATGCCTCAGCGGCC  48 32
CXD79_RS10280 2097252 .. 2097279 -  -2.5  -3.08679   GGGGTGTAGCGAATA        GGCATCGCGGC ATTGTA GCCACTGCGCC         CCCCCCTCGCCGCAG  42 87
CXD79_RS10275 2096410 .. 2096422 -  -3.3  -3.78793   CATAATTATGAATAA                GGCGA TGG TAGCC                TGCTTTGCGGCGGCC  56 89
CXD79_RS10270 2095537 .. 2095564 -    -9  -3.01712   TGTCTCGCTCGAACA        GCCGGCCCAGCC GGGC GATCAGGCCGGC         GCTTTCGCCGGCGGC  57 69
CXD79_RS10265 NONE
CXD79_RS10260 2093064 .. 2093093 -  -8.5  -2.62983   CGGACGTGTACAGGA       TGGCG-GCCAGGTC GTC GGCCTTGCGCGCCA       CCGTCCTGAAGCGCT  52 485
CXD79_RS10250 2090786 .. 2090809 - -13.8    -4.015   CCAGCGATGAAAGAA          GAGCCGCGCC GGCC GGCGCCGCTC           CCCTTTCGTCCCTCA  84 53
CXD79_RS10245 2090142 .. 2090161 -  -5.6  -3.32343   GGGATATCCCTAGAA            CGGCCGGCC GCG GGACGGC-G            CAACCCCTACTTCAC  51 32
CXD79_RS10240 2088996 .. 2089027 - -20.8  -2.71712   GTGTTCGGTGGAAAT      GCCGGCCGGGCGCC GCGC GGCGCCCGGCCGAA       TACGCGATTACTTGA 100 33
CXD79_RS10230 2086965 .. 2087008 - -10.9  -3.14344   CATCGCCTTGATCAA GGCGCAGGCGGTGCTGCTGGG CCTG CCCGGCC-C-CGGCCTGCGCC TGTCCGCGCGCAACC  64 257
CXD79_RS10220 NONE
CXD79_RS10215 NONE
CXD79_RS10210 2083784 .. 2083800 -  -2.1  -4.62069   CGCTGAGGCGAAAAA              CGCATGG ATT CCTCACG              GAGGTAAAAGCGCGC  70 266
CXD79_RS10205 2082424 .. 2082455 -   -15  -4.26076   CGATGCTCACGAAAA      GGGAACGCGGCGCC GTCG GGCGCCGCGCGCCG       CTTAGGACTGCTGGC  95 27
CXD79_RS10200 2078927 .. 2078958 -  -6.5  -3.61398   CGCGTCGCGGAAGAA      CTCGCACCAGCCGA TCTCG TCGGCCGGCGTG-G      CGCCCTGCGGCGCCA  56 227
CXD79_RS10190 2076903 .. 2076921 - -11.6  -2.56271   TCGTGATGATAATAC             GCCGGGCG CCC CGCCCTGC             TTCAGGCGTGGCCGC  61 27
CXD79_RS10185 NONE
CXD79_RS10180 NONE
        uvrC NONE
        pgsA 2072781 .. 2072791 -  -8.2  -3.85698   CGCGGTCTCCAGAAA                 GCGG CGG CCGC                 GAACCAGCCCGCCAC  68 111
        aceA 2068909 .. 2068930 - -11.5  -6.06723   GGCGGCAAAAAAAAA           GGGGGCGTC CGAG GACGCCCCA            AATCCACCCTGCAAC 100 85
CXD79_RS10150 2067510 .. 2067526 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD79_RS10125 NONE
CXD79_RS10120 NONE
CXD79_RS10115 NONE
CXD79_RS10110 2060401 .. 2060414 -  -2.4  -4.25658   AGGCGATGAAAATAA               TCGT TGTCAT ACGA                GGCGTTCCCGTCGTG  62 43
CXD79_RS10105 NONE
CXD79_RS10100 2058840 .. 2058855 -  -6.1  -3.20382   TTCCAGATCTACGAA              GCGCT GGCCGA AGCGC               AGGAGTCGATCGACG  50 100
CXD79_RS10070 NONE
CXD79_RS10065 2049299 .. 2049309 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS10060 NONE
CXD79_RS10055 NONE
CXD79_RS10050 2046688 .. 2046706 -  -6.8  -3.28712   TCCTGCGGTTTATAA             GATGTATC TAT AATACATC             TTATGGCTTAGGCAT  54 442
CXD79_RS10040 NONE
CXD79_RS10035 NONE
CXD79_RS10030 2044547 .. 2044563 -  -2.1  -3.08046   TTCTCACTGCAAAAG              TTCGGCC AAC GGCGGAT              TTTCGCAGATTTGGG  42 60
         xth NONE
CXD79_RS10020 2042131 .. 2042142 -  -2.2  -2.90571   AAGTCCGCAACTATA                CACGG ATT CCG-G                CCGTTTTGGTAGCGG  40 82
CXD79_RS10015 2041992 .. 2042019 - -12.8  -5.63517   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT 100 42
CXD79_RS09975 2035704 .. 2035731 - -18.4  -2.50443   GGAGAGGGCAGGAAG        CGGGCGCGCGCA GGCG TGCGCGCGCCTG         GCCGGGAGGCGTCTG  87 406
CXD79_RS09950 2031473 .. 2031491 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 249
CXD79_RS09920 2025984 .. 2025994 -  -2.4  -2.71461   AGAATAGGAAACCGA                 GGCC CGT GGCG                 GCAATGCCGATTGCT  38 101
CXD79_RS09915 NONE
CXD79_RS09910 NONE
CXD79_RS09905 NONE
CXD79_RS09900 2020724 .. 2020770 - -17.2  -3.56821   AGGAGATCCTGGAAA GCCGGCGCCAGGCCGGCGAAG GGGACG CCGCGCCGGCC-GGCGGCGAC GGGCCTGCGCCGCTG  93 418
CXD79_RS09885 NONE
CXD79_RS09880 NONE
CXD79_RS09875 2017146 .. 2017180 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 213
CXD79_RS09855 2014736 .. 2014746 -  -2.4  -2.71712   TCTCGCGGGCGAAAG                 CGGG CCC CCAG                 TATCCCGGCAAGCGG  38 75
CXD79_RS09850 NONE
CXD79_RS09845 2011688 .. 2011719 -  -6.4  -3.23216   CCGCACGAGCACGAA      CGCACCGGCCACCAG GGG CCCGAGGC-GGCGCG      CGTCAATCGCGTCTG  50 480
CXD79_RS09835 2010464 .. 2010521 - -21.1  -2.83403   GCGCCGCCAGGAAAG CCGCCATCGCCCGGGCCGCCGCCCGGC ATGG GCCGGGCGGCGGTTCGAAGGACGAAGG ATGTTGCTATTAAAC 100 102
CXD79_RS09830 2009663 .. 2009689 -   -10   -3.5393   ATGATCCGGCGCAAA         TGGCCGCTCAAC TGA GCAGGGCGGCCA         CCAGATCGCGGTTGG  67 6
CXD79_RS09825 2007421 .. 2007441 -  -5.3  -3.57144   GCCTGGACGCGCAAA            GTATCCGCT TCG AGCGGCTGC            TGCCCGGGCCCATCG  54 514
CXD79_RS09810 2005979 .. 2006030 - -11.6  -3.14931   GGGATGGCGCAGCAA CTGGCCGGCGCCGAG-CGCATCGTCG ACGC CG-CGGTGCGGCGCG-CGCCGGCC-G ACTGAGCCGGGCGCG  66 41
CXD79_RS09800 2005107 .. 2005138 - -24.6  -2.82759   AAGATACCTATGACA      CAGGAGCCTGTCCC GACG GGGACAGGCTCCTG       CCGAATCCTTCCGTA 100 121
CXD79_RS09790 2003292 .. 2003310 - -10.2  -3.01712   TCCTGCCGCTGAACA             GCCGCGAG CGC CTGGCGGC             GATGCGCTACGACCT  59 358
CXD79_RS09780 2001307 .. 2001322 - -10.4  -2.78384   GGGTGGCCGACTATA              TCGCGC GGCT GCGCGA               CGACCCCGAGCTGGC  56 498
CXD79_RS09765 1998734 .. 1998756 - -11.3  -2.70932   GGCGCTGTCGAATTA           CCAGCAGAC CAAGT GCCTGCTGG           TGAGCTACAGCGCCA  59 148
CXD79_RS09755 1994948 .. 1994982 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CXD79_RS09710 1986978 .. 1987012 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS09700 1985087 .. 1985114 -  -5.5  -3.66058   ACAGCAGATAGAGAA        TGCTCATGGCGC GGGTT GCGCCACG-GCG        GCGGCGGGCGCGGCG  57 1
        ccoS 1984544 .. 1984567 -  -7.4  -3.28924   CAGCTTGTCGCAGAA          CAGCCGCGCCT GAC AGGTGCG-CTG          CACCACGTAATACGA  56 408
        ccoO NONE
CXD79_RS09680 NONE
        ccoP NONE
        ccoG NONE
CXD79_RS09665 NONE
CXD79_RS09660 1979472 .. 1979489 -  -3.3   -3.6761   GCGTCGCAACAAACA             CGGCGCT TCAG AACGGCG              TCTCGTCCTGGCCGC  53 15
CXD79_RS09655 NONE
CXD79_RS09650 NONE
CXD79_RS09645 NONE
CXD79_RS09640 1975849 .. 1975876 -  -6.2  -3.01712   CGCCGGGCCCGAACA        GGGCGTCGCGCTG GCG CAGCT-GACGGCC        GCCACCATCCGGGCC  48 476
CXD79_RS09630 NONE
CXD79_RS09625 1974058 .. 1974097 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAC CTAG GTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD79_RS09620 1972667 .. 1972691 -  -4.9  -3.77087   GAGTGAACATGGAAA          TCCGCCCCG TACGCAC CGAGGCCGA          TTACAAGTCGGCTCT  58 361
CXD79_RS09610 1971595 .. 1971612 -  -8.3  -3.67954   CAAATAGAGGCCAAA             GCGCTGC GCAA GCTGCGC              CACCCCAGCCGCGCC  67 483
CXD79_RS09595 1968597 .. 1968614 -  -8.3  -3.63968   GCCGAAATGGCGAAA             CTGGCCG AAAG CGGCCTG              GCGACCGACGAGGCG  63 129
CXD79_RS09500 1946785 .. 1946803 - -17.4  -3.15544   TGCCATGGGCAGGAA             CCCCCGGC CGC GCCGGGGG             GCCCTTGCGTTCAGA  84 36
CXD79_RS09485 1943806 .. 1943816 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS09475 1942784 .. 1942823 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGCCCAGG  64 4
CXD79_RS09470 NONE
CXD79_RS09465 NONE
CXD79_RS09460 1939971 .. 1939993 - -11.2  -3.57144   CGGGCGAGCGCGAAA           GCTAGGGCGC GCG GCGCGCCAGC           GCGGCCAGCGCGTCG  70 4
CXD79_RS09440 1937221 .. 1937240 - -16.4  -3.90112   CTGCCGGCAAGCAAA            CGGCCCGC GCAA GCGGGCCG             TTTGTCTTGGCGCGA  93 53
CXD79_RS09350 NONE
CXD79_RS09345 1916370 .. 1916388 - -17.4  -3.10522   AGGCGACGCAACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGCGTAC  84 135
CXD79_RS09290 1904521 .. 1904531 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 86
CXD79_RS09285 1903148 .. 1903163 -    -6  -2.50699   GCTCAAGGAAGATAT              GGTGGC GTTT GCCGCC               GAGCATTTCGACCTG  44 379
CXD79_RS09225 1892612 .. 1892640 - -19.7  -4.15508   AAGCAAGCCGCAAAA        GAAAAGCGGAGCC ATG GGCTCCGCTTCTC        GATGCCGGCCGTGCC 100 45
        lexA 1891817 .. 1891831 - -12.8  -4.74103   GCCCCAAGGCAAAAA               GCCCCC TCG GGGGGC               AGCAAGCCCGCGTAG 100 75
CXD79_RS09135 1877098 .. 1877122 - -22.9  -4.11692   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTCGGCTATC 100 91
CXD79_RS09110 1870245 .. 1870270 - -14.7  -5.14563   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 45
CXD79_RS09075 1865705 .. 1865741 -   -21  -4.59773   CCCCATCCGTAAAAA    GAACTGCCGTCATCCC TTGTG GGGATGGCGGCAGTTC    GACTGCGCACGCGAA 100 70
        dapD NONE
CXD79_RS09055 NONE
CXD79_RS09050 1861346 .. 1861356 -  -4.6  -2.64912   GGGTCAAGCCAGAAG                 CGCG TAT CACG                 TGTTCAATTGTTCGC  42 21
CXD79_RS09045 1859371 .. 1859381 -  -2.4  -3.58365   GAGTATAGGAGATAA                 TGCG TCT CGCT                 GGTTTTACGCTGCGC  48 74
CXD79_RS09040 1855981 .. 1855995 -  -7.1  -3.53012   CCCGGGCCCGGGAAA               GGCTG TATCT CAGCC               TGGCGCAAAGCCGCA  58 488
CXD79_RS09025 1852064 .. 1852098 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS09010 NONE
CXD79_RS09005 NONE
CXD79_RS09000 1844745 .. 1844760 -    -6  -4.08945   AGCATGGCGGGAAAA              GGGCGC GGCG GCGCCG               CCTGTCAAAGTGGTG  66 104
       coaBC 1843308 .. 1843360 -  -9.2  -3.53174   AGAGGCGGAGAAACA GCAACTG-GA-AGCCCGGCC-GCGC TTTCTG GCGCTGGCCTGGCTGTCGCTGTCGC ATTCGCTGATCGAGG  61 191
CXD79_RS08985 1841954 .. 1841976 -  -6.8  -2.84298   GACAGTTCACAACTA           GCGCGGCGCC GCG GGCACGGCGA           CCACGGGCTCGTCCT  50 0
CXD79_RS08955 1836816 .. 1836832 -  -2.1  -3.61398   TTGCGCGGTGAAGAA              GACATCC GCC GGCTGGC              CGGCCATACCTTGCT  50 223
        cphA 1831305 .. 1831325 - -15.4  -3.61398   CCTGTCGTCGAAGAA            GCGCCGCC GTTCG GGCGGCGC            GGCAAGAGGGGCGAA  83 50
        cphA 1828630 .. 1828647 - -14.1  -5.28176   CGCAGGGAGAAAAAA             GGCCGGC TTGC GCCGGCC              CAAGTTACATTTGAG 100 84
CXD79_RS08930 NONE
CXD79_RS08925 NONE
CXD79_RS08920 1827582 .. 1827603 - -15.9  -5.86965   AGGCACCAAAAAAAA           GCCTTCGGG CGAA CCCGAAGGC            GGTACACGTACGGCG 100 73
CXD79_RS08895 1824051 .. 1824069 -  -5.9  -3.16564   CGCCGAGGCCATCAA             GGGCGAC GCTCA GTCGGCC             GCAGGCTGAGCCAGC  51 16
CXD79_RS08885 1821120 .. 1821146 -  -5.1   -2.8352   CGGTAACTGAACAAG        GCGGCTCCG-CGT CAG ACGGCGG-GCCGG        ATGGTGGCCAGCTCG  46 10
        rlmJ 1819831 .. 1819873 -  -8.8  -3.28924   CATCGCCGGCGAGAA CGCCGCGCGCTATCCGGACG TCG CGCCGGGCCTGCGCCGGGCG GCGCTGGGCGTGGTG  59 407
        cueR 1816992 .. 1817014 -  -8.3  -3.29144   CCAGGCGCGGCAGAA           GGCGCGCGA GGAGG CCGAGCGCC           TTGCCGAGGCGGCCG  58 72
        plsY 1809635 .. 1809663 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGCGCGGTGG  56 162
CXD79_RS08815 1808112 .. 1808139 -  -9.8  -2.52464   GGCGGCGGCAACGCA        GGCCGCCATC GTCGAGGT GCTGGCGGCC         AAGGCCATCCGCGCC  55 402
CXD79_RS08805 1805897 .. 1805927 - -18.3  -3.58343   TTGACGACCTCGAAA       GCAGGCAGGCCGC GCGAG GCGGCCTGCTTGC       GGGGCGAGGCGCGCG  90 49
CXD79_RS08795 1804072 .. 1804087 -  -4.6  -3.64703   GCGTGCGCAGCGAAA              CCTTCG ACGC CGACGG               CGCGCAACTGGAATT  54 146
CXD79_RS08770 NONE
CXD79_RS08765 NONE
CXD79_RS08760 NONE
CXD79_RS08755 1794944 .. 1794954 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS08750 1793749 .. 1793763 -  -8.5  -3.35813   GTCGAGGTTAACGAA               GCCGC GCCGA GCGGC               CCCTTATTCCAGGCA  59 202
CXD79_RS08725 1788322 .. 1788335 -  -8.1  -3.06261   CGCGAACGCGGAACA               GCTCG AAGC CGAGC                TGGCGGCGCAGGTCG  52 279
CXD79_RS08715 NONE
         alr NONE
CXD79_RS08700 NONE
CXD79_RS08695 1780547 .. 1780562 -    -6  -3.53811   GTTACGTGGTGGAAA              CCGGCG AGAC CGCCGC               GGACCGCATGCTGCG  56 158
CXD79_RS08680 1778388 .. 1778421 -  -2.3  -3.60792   AGCATTCAGATACAA     CGCGCTGAACGTCTT CCGT AAAACTTACGACGCG      ACGTATGGGGACTAC  48 37
CXD79_RS08675 1777223 .. 1777233 -  -2.4  -4.07568   CCCGGGTTCGGAAAA                 GCAG CAT CAGC                 ACGCTGGCGGTGGTG  58 448
CXD79_RS08565 NONE
        sycN NONE
CXD79_RS08555 NONE
CXD79_RS08550 NONE
CXD79_RS08545 NONE
CXD79_RS08540 NONE
CXD79_RS08535 NONE
CXD79_RS08530 1755600 .. 1755621 - -12.9  -3.01712   CCTCGGCCCCGAATA           TCGCCGCGC TGAC GCGCGGCGT            CTAGGTCGGCGGCGA  70 65
CXD79_RS08520 1753378 .. 1753390 -  -4.1  -3.55444   GCGCGACCGTGGAAA                TCGAA GAC CTCGA                CTCGGGCGACCGCCT  51 511
CXD79_RS08510 1750299 .. 1750339 -  -3.2  -3.28712   CCTGGTGGCCGAGAA CCTGGGCCACGTGAAGGCGG TCG CCGCCATGAC-CGGAC-AGG ACCTGGACCGCTACG  47 523
CXD79_RS08500 1749028 .. 1749052 - -11.4  -3.14344   GATGCGCGCCATCAA         CGGCGCGGCCG GCTT CAG-CGCGCCG          CCAGCCGCTGCGCCA  66 15
CXD79_RS08495 1747419 .. 1747453 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS08460 NONE
CXD79_RS08455 1739317 .. 1739333 - -15.1  -3.05384   GGCCTGCCGACCGAA              GCCGGCG CCA CGCCGGC              CGTCTCGGCGCAGCC  74 475
        htpX 1736930 .. 1736949 - -16.4  -4.18018   TTGGCTCATGCAAAA            CGCGCCCC TTGC GGGGCGCG             TTTTCGCTGGCGGAC 100 52
CXD79_RS08425 NONE
CXD79_RS08420 NONE
CXD79_RS08410 NONE
CXD79_RS08405 1728655 .. 1728710 -  -5.5  -2.82623   GCGCTGGGACAAGTA CCACATCG-A-CATCCTGTGCGC-GCAC TTC GTGCAGCACCCGGACTGGTTCGATGTGG TGGTGGCGTCCAACC  44 400
CXD79_RS08390 NONE
CXD79_RS08385 NONE
CXD79_RS08380 NONE
CXD79_RS08375 1720554 .. 1720588 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        gabT NONE
CXD79_RS08360 NONE
CXD79_RS08355 NONE
CXD79_RS08350 NONE
CXD79_RS08345 NONE
CXD79_RS08340 1713190 .. 1713246 -  -3.7  -3.53012   GCCTGCGCCGCGAAA CGGTGGCGCAGCTGGCGGC-CAAGA TCCGCGCCT TCCTGCGCGGCGAGCCG-GTCACCG GCATGGTGACGCGCC  49 65
CXD79_RS08330 1710347 .. 1710363 -  -2.1  -3.17051   CCGGCACCAGCAACA              GCGCGGT GCA ATCGGGC              CTGATAGGCATGATA  43 498
CXD79_RS08315 1706955 .. 1706973 - -17.4  -3.55622   GGCAAGGCCGGGAAA             CGGGCGGC ATG GCCGCCCG             GACGGTTATTGCGCT  89 31
        purD NONE
CXD79_RS08305 NONE
        nadD 1704013 .. 1704025 - -10.5  -3.93489   TAACGATAAATATAA                CCCGC GGC GCGGG                TGTCGATGTGGCGGA  77 60
        rsfS NONE
        rlmH NONE
CXD79_RS08285 1702018 .. 1702048 -  -7.5  -2.73364   GGTCGATGCCAAGCA      CCGCAGCCACG-GC CTGG GCGCGTTGCTGCGC       GGCGGGCGCCGTATC  49 472
CXD79_RS08250 NONE
CXD79_RS08245 NONE
CXD79_RS08240 1690762 .. 1690781 -  -7.8  -3.67597   GGCGCTATTGAAGAA            CCCGGC-CG CTG CATGCCGGG            CCCGATGCGCTAGAT  63 35
CXD79_RS08225 1687437 .. 1687457 - -15.4  -2.57132   CCGGTGGGCCAGAAT            GCCGCCCG CCTGT CGGGCGGC            CAGCGCCAGCGCCTG  69 298
CXD79_RS08215 NONE
CXD79_RS08210 NONE
CXD79_RS08205 1683754 .. 1683792 - -19.7  -3.01712   CGGCGCCCGTCAACA  CTGCGGTGTGCCTGTCCC AGTG GGGACAGGCACACCTC-G   CCGCGGATGTCAGCT 100 84
CXD79_RS08190 1679416 .. 1679455 -    -2  -3.44527   CACCGATTACGACAA GGGCTGGCTCGACC-TGG TGGCTG CCGCGGGC-AGCCTGCCC  GCGCCGCTACGCGAG  47 463
        lpxO 1671541 .. 1671576 - -20.4  -2.53015   ACAGGCGCCAAGTCA    GCGGGTGCCAGTCCCC CCGC GGGGACAGGCACCCGG     GTGGTTAGAGTGCCA  95 30
CXD79_RS08150 1665982 .. 1666036 - -13.5  -3.04322   GGTAAGTTGCGAACA GGCCAT-TTTAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTGGTTACAGCT TCTTGATGAAAACCA  70 18
CXD79_RS08145 1665640 .. 1665655 - -11.8  -4.90266   GGCATCAATGAAAAA              CCGGCC TGCC GGCCGG               TTGCGATGAGGCGAA 100 53
CXD79_RS08140 1663630 .. 1663652 - -12.6  -3.61715   CACCGGGGTCAAGAA           CACCGAGCGC CTG GCGCGCGGCG           AAGAAGCCATCGAGA  74 122
CXD79_RS08115 1657620 .. 1657674 -  -7.2  -3.39327   CGGCTACACCCACAA GCGGCGCGCGTTGTTCATG--GAC GGGGGCGTG GTCTACATGTACTACGCGCGCGGC GGCGATTCGCTCAAT  55 480
CXD79_RS08065 NONE
CXD79_RS08060 1647556 .. 1647566 -  -3.2  -2.63631   TCAACTGCGACATGA                 TGGA TAG CCCA                 GGTTGCTCGAAGGGA  39 53
CXD79_RS08055 1646231 .. 1646241 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS08050 1645172 .. 1645207 - -14.7  -2.70932   GGTGGGCGGGAACGA   CGCGGCGGCGC-CGCGG CGGG CCGCCTGC-CCGCCGCG    CTGAGATGCACTAGA  72 45
CXD79_RS08005 1636865 .. 1636886 - -14.4  -4.07885   GACGGTCCTGCAAAA           CGGGCCCG TCTGCG CGGGCCCG            TGGCGGCAATGCCGG  85 42
CXD79_RS07995 NONE
        acnD NONE
        prpF NONE
CXD79_RS07980 NONE
CXD79_RS07975 1628543 .. 1628556 -  -3.9  -3.53012   TCGCTGGCGCGGAAA               TCAAA AGGG TTTGA                CGACAACCAGCGTGA  51 12
CXD79_RS07970 1627097 .. 1627108 -  -7.2  -3.28712   GCGGCGCTTTTACAA                CGCC GCGT GGCG                 CGCGGGCCGGCGCTT  54 39
CXD79_RS07965 1626637 .. 1626655 -  -7.4  -5.75342   CCCGGCCAAAAAAAA             CCCGCT GGTTTAG AGCGGG             TCTTAAAAGGGGCTT 100 96
CXD79_RS07955 1625092 .. 1625112 -  -8.3  -3.09492   CCGTGAACTGCAACA            TCCCCGT ATCCCTA ACGGGGA            CGTATAAGGGTTATT  56 39
CXD79_RS07950 NONE
CXD79_RS07945 NONE
        hslO NONE
CXD79_RS07935 1620558 .. 1620574 -  -7.9  -2.84325   GCCCGGCAAATACGA              CCAGGCC TTC GGCGTGG              ACAAGTCCGGCCTGT  52 449
CXD79_RS07915 1617051 .. 1617084 - -27.5  -3.16742   GTTAATGGTCAGTAA     TCCGGCCAGGCCGCG GCAT CGCGGCCCGGCCGGA      AACCGCTGTCTTCCG 100 487
CXD79_RS07820 1596610 .. 1596656 - -16.5  -5.00884   ACGGTCTGGAAAAAA GGCGC-CGCGAGGGCGCCTGGTA TCC TGCC-GGCGCCCACGTGCGCGCC CGCGCTTACATGCCG 100 31
CXD79_RS07815 NONE
CXD79_RS07810 NONE
CXD79_RS07805 1593910 .. 1593928 -  -8.8  -3.45849   GCTAGACCACGACAA             CGCGGC GCGGCTG GCCGCG             GGCCTGGACGGCATC  61 273
CXD79_RS07770 1585319 .. 1585336 - -14.1  -4.41494   GAGGCCCAAGCAAAA             GCGCCCC GGAC GGGGCGC              TTTTGCTTGGGCCTT 100 61
CXD79_RS07760 1583638 .. 1583667 -  -8.5  -3.05596   CAGGTGGTCAGCGAA       GCGGTGCAGGGCCG GGC CGGCC-TGAACGGC       TAGTTGTGAACTGTC  55 25
CXD79_RS07740 NONE
CXD79_RS07730 NONE
CXD79_RS07725 1575613 .. 1575640 - -18.4  -2.71924   CAGCCTCCCGGAAAG        GCGGGCGAGTCC GTCA GGCCTCGCCCGC         GCGGCTCAGGTCATG  87 11
CXD79_RS07720 1575258 .. 1575277 -  -2.7  -3.63266   AAAATCCATCGGAAA            CCGGGCC CTGTTC AGCCGGG             CCGTACGTTGCGCAT  53 17
CXD79_RS07715 1574417 .. 1574435 - -14.6  -5.78622   GGAGGCGAAAAAAAA             GGCTTGCC GTT GGCAAGCC             TTTTTCGCTGCGCAG 100 50
CXD79_RS07710 1573304 .. 1573326 -  -5.5  -3.83026   CCGCGGCACATGAAA          GATCCGC-CC GGCT GGTGCGGGTC           ATGGGTTGGCCGCCT  60 24
CXD79_RS07705 1572203 .. 1572213 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 171
CXD79_RS07695 1569956 .. 1570003 -  -7.4  -3.64822   ACGCCGCCATCGAAA CGCCGTATTCGTCCACCGTCTG CCAA CTGGCGCTGGCCGGCCACGGCG TGGGCATCGCCAACC  60 228
         maf NONE
CXD79_RS07590 NONE
CXD79_RS07585 1550989 .. 1551034 - -13.1  -2.71712   TCGTCTTCGCGAAAG CCGCCGCCGCGCGGCAGGGCGC GCA GCACCATGTCGCGCG-CGGCCT GGTGCTTCTCCGTCA  67 217
CXD79_RS07490 1530528 .. 1530584 - -11.5  -3.65812   GGCTGCCGAACAGAA GCCCGGCCAGTAGCCCGGGCGGCAAGCC GCGC GGCGT-CCGGCCGC-CT-CAGGCCGGGC GCGTGCGCCGGACCT  75 15
        mobA NONE
CXD79_RS07425 NONE
        mobB 1516939 .. 1516951 -  -3.3  -4.36914   CGCTGTGGCAGAAAA                TGGGC GCG GCCGA                CGGCAATGCGCCGCC  67 162
CXD79_RS07390 NONE
CXD79_RS07385 NONE
CXD79_RS07380 NONE
CXD79_RS07375 1507689 .. 1507713 - -11.3  -3.57792   CGACGTATTGCGAAA          GCCTGCGGCTG GAG CTGGCGCAGGC          CGGCGTGCGGGTGGT  70 398
         tal 1501423 .. 1501433 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS07350 1500374 .. 1500384 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS07340 1499087 .. 1499100 -  -4.5  -3.28924   CATCTCGGTGCACAA               CCGCGC CCA GC-CGG               TGCAGGCGGCGCTGG  49 295
        smpB 1492294 .. 1492307 -  -5.9  -2.71364   GTACGCGGCCAAGCA               GGCCG GCCG CGACC                GCATCAGGAATCGCG  47 29
CXD79_RS07280 1488859 .. 1488880 -  -8.6  -4.56597   CGGCGTGCTGAAAAA           GCGCGAGG TCAACG CCGCGCGC            AACGCCGACGTCAAC  83 258
CXD79_RS07270 1487763 .. 1487783 -   -14  -4.77036   CGGCAGCAGGAAAAA            GCCTCGCC CTTGC GGCGAGGC            TTTTTTTCGCCGGGC 100 52
CXD79_RS07260 1484114 .. 1484124 -  -2.4  -3.16492   GCATATCCACGAACA                 CCTG GAC CTGG                 AGGCAGTGCTGCCGC  43 291
         map 1467219 .. 1467236 -  -5.5  -2.87132   GGCGGGGGTCAGAGA             GCCGG GATTTCGA CCGGC              CGTGTCACGAAGGCC  46 1
CXD79_RS07170 1464175 .. 1464190 -  -7.5  -3.30124   GGTGAGCGGGTAGAA              GGCGC GCGCCT GCGCC               ATCTCGGGCGTGAAC  56 420
CXD79_RS07160 1463255 .. 1463311 - -31.9  -2.71364   CTACGCGGCCAACGA CGCCTGACCGGCGCGGCGCGGCCGGCTT GCGC AAGCCGGCCGCGC-G-GCCG-TCAGGCG TTGCGCCGCAACGCC 100 19
CXD79_RS07135 1458272 .. 1458284 -  -3.3  -4.57569   CGATTCTGTCAAAAA                TTGGC GCC GCCTA                TTGGCCGGGTAAAGG  71 117
CXD79_RS07130 NONE
        fliS 1456412 .. 1456437 -  -3.1  -4.82901   GCGGCTGGACAAAAA         GTGCCTTCCTG GTTT CAGGCCGGAAC          GGCAGGCGCAGGGTG  75 14
CXD79_RS07120 NONE
CXD79_RS07115 NONE
CXD79_RS07110 NONE
CXD79_RS07105 NONE
CXD79_RS07100 1453728 .. 1453777 - -11.4  -3.53444   GCATGCTGTCGCAAA TGCGCGCCGTGGTGCGCGCCG-CGC AAA GCGGCGGCGC-CACCGAGGC-CGAA CTGGCGCCTGGGCCG  69 276
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1447912 .. 1447963 -  -4.4  -3.30441   CAGCACTTGCGAGAA GCTGGGACCCTTGCCG-GC--GGCGGC CGG GCCGCCTTGCGCGGCC-GGA-CCCGGC GCAGGCGTCAGGGCG  49 96
CXD79_RS07060 1445582 .. 1445599 - -10.5  -2.52464   TTCTGCCGCAATTCA             CGCCCGC GCTG GCAGGCG              AAAAACAGGGCGAAA  56 308
        fliL NONE
        fliM NONE
        fliN 1443427 .. 1443441 -  -5.6  -3.14564   GGATTCGGTCATGAA               GCGGCT TTT AGCGGC               GACTGTTCAAGCGGT  49 18
        fliO NONE
CXD79_RS07030 NONE
CXD79_RS07025 1441970 .. 1441985 -  -5.4  -2.78712   TGGTGAACGCAATCA              TGG-CGC GGC GCGGCCA              GGCGCGTTCAGGACA  45 33
        fliR 1441036 .. 1441054 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 153
        flgA 1422770 .. 1422785 -  -5.4  -2.79004   GGATCTTCAAAATAT              TCTCCGC TGC GCGG-GA              CCGGCCCGATGGGGG  45 131
        flgM NONE
CXD79_RS06930 1421892 .. 1421908 -  -9.3  -3.01712   CGGGCGCGCGCAAGA              CGCCCGC GCG GCTGGCG              CCCGCGGCCTTGATG  57 91
CXD79_RS06910 1414861 .. 1414915 -  -7.7  -5.35365   AAAACATAAGAAAAA GCAATATAC-CCGGGAGCCTGTCCCC GAAC GGGGACTGGCTCCCGCTGACTTCTAC TTGCCAGCGCCCCAG 100 102
CXD79_RS06905 NONE
CXD79_RS06900 NONE
CXD79_RS06895 1412398 .. 1412408 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS06890 1411239 .. 1411270 -  -5.7  -3.30214   AATCGACTACATCAA      CGGCGCCATCC-CC AGGCA GGCGGCCCGCGCCG      GCATCCAGGCCCCGG  52 149
        leuD NONE
CXD79_RS06860 1404561 .. 1404571 -  -8.2  -2.57132   GCGGTGGCCTACAAG                 GGCG CGG CGCC                 GGCGCTGGTGGCGCT  51 446
CXD79_RS06830 1397578 .. 1397588 -  -2.4  -3.68351   GGGCCATGATCGAAA                 CGCC GCT GGCC                 ATCCTCAATATCGGC  53 513
CXD79_RS06815 NONE
CXD79_RS06810 1391817 .. 1391849 -  -5.4   -3.4072   CATCCGCGACGACAA     CGC-GCTGACCGCCC GCCT GGGCGCCCGGCTGCA      GGGCGAGTACGCGGC  52 281
CXD79_RS06785 NONE
        clsB 1385497 .. 1385543 -  -9.8  -3.19602   CCTGGTACAGCAATA CCCCGACGACGGCCAGGCCGAC GAT GCCGGCCAGCCAGGCGCCCAGG CGGCGCCGGCGGTGT  62 60
CXD79_RS06760 NONE
CXD79_RS06755 NONE
CXD79_RS06750 1381323 .. 1381345 -  -8.3  -2.87132   GCTGTCGTCCACATA           GCGCAGCGC GGCGG GCGCCGCGG           GGCTCACGAGCGGCG  54 29
        treS NONE
        glgB NONE
        glgX NONE
        treZ 1367907 .. 1367958 - -10.5  -3.04144   CGGGCACGCGCAACA TCCCGCCGGCGCGCGCGGTCAGC ATGGCG GGAGGCCGGGCGCGCCAGCGCGC CAGGGTGTCGGCGGT  60 188
        treY 1364028 .. 1364067 - -15.6  -3.14132   GCTGCCCGGCATGAA  CGGCCAC-GCGCTGGCGCA GGC CGCGCGGGCGCTGCGGCCG  GCCCTGCGCATCATT  78 169
        ptsJ 1358045 .. 1358061 -  -4.3  -3.09908   CGTTCGGAAAATAAC              CGCCCCA TTA TGGGAAG              TCGCCTGGTTGATGT  47 55
CXD79_RS06685 1357375 .. 1357385 -  -5.4  -3.03798   AGGGCGAGAAAGAAT                 GTGA GGC TCAC                 CCGGCCGATGGGCAG  47 186
CXD79_RS06680 NONE
CXD79_RS06675 NONE
CXD79_RS06670 1355144 .. 1355165 -  -9.4  -3.01712   CCTGTCGGTGGAACA           GGCCG-GCC GCCAT GGCGCGGCC           CAGGCGGCGGTGCGG  57 396
CXD79_RS06655 1353521 .. 1353543 - -20.6  -5.41746   AAGCGTCCAAAAAAA           CAGGGCCGCC CGA GGCGGCCCTG           CGATCGCGGCGCGGC 100 51
CXD79_RS06650 1352686 .. 1352708 - -10.5  -3.34398   CGCGGCGCGGAAACA           TCGCCGGCG CGCGC CGCCGTCGA           ATTGGGCGCGGTCAC  63 273
CXD79_RS06645 NONE
CXD79_RS06640 1351181 .. 1351203 -  -3.3  -3.24747   GCGTGACATGATGAA           CTCCGGG TGGGCAGGG CCCGGCG           AGGCGGGCCGATGCC  46 89
CXD79_RS06635 1350207 .. 1350257 -  -5.6  -3.42996   CACCATCTACCACAA CCCGCGT--TGCAGCACGTCGC-GCA ACG TGCTGCAA-ATGCTGCGCGACGCGGG CATCGAGCCCACCAT  52 403
CXD79_RS06610 1345357 .. 1345370 -  -2.3  -2.62184   GTGCGCGTCAGACCA               GCTTG AGGT CGAGC                GGACGCGCGCCCGGA  38 4
CXD79_RS06605 NONE
CXD79_RS06600 NONE
CXD79_RS06595 NONE
CXD79_RS06590 1343197 .. 1343209 -  -2.6  -2.78384   GTGCGGTTCATGACA                GCGC CCTCT GCAC                GACCACGGCCACCGC  38 5
CXD79_RS06585 1342424 .. 1342440 -  -4.4  -3.10641   GAAGGCATCAGGGAA             CGAG-GG CGGT CCACTCG              GGGCTGGAGAATTTT  47 1
CXD79_RS06580 1341506 .. 1341544 - -10.4  -3.53012   CCGGCGCGCGGCAAA  GGCG-CGAACAACG-GGC CTTGC GCCGCGTTGTTCGGCGGC  GCCCGCCGCCGGCGC  67 41
CXD79_RS06575 1340895 .. 1340907 -  -4.7  -3.02739   GGGAACGGATACAGA                CGGGC CGC GCGCG                GCGTCCGTGGCGACA  45 82
         psd 1339857 .. 1339913 -  -2.2  -2.74192   CAGTGCGGAAGACGA CATGAGAGCTCCAGAAACGGCGGC GATGGCCAG GCCGCAATCTAGCAAGCCCTCATG TATCGATAAAGCGAA  38 56
CXD79_RS06565 1338247 .. 1338279 -  -5.6  -4.31837   AAGAAACTGAAGAAA     GGCGATGCCATCCCGC AGG GCGCGAC--CATCGCC     GTGCCCAACGACCCG  69 461
CXD79_RS06545 1335982 .. 1336039 - -12.5   -3.3514   ATTGACAGTTCACAA CTAGCGGATACTGCGTGCGCAGGGCGCG CTG CCCGCCCAGCG-ACGCGGTCAGCGCCAG CACGACGGGCATGGC  73 193
CXD79_RS06525 1332659 .. 1332692 -  -4.5  -3.84451   CCGCCGAAATCGAAA     TGGTCGAGACACT-GG GCT CCGAGCAACTCGTCCA     TGGCCGCTGCGGCAA  60 296
CXD79_RS06500 1327428 .. 1327448 -  -5.3  -2.53263   GCGACGCCGAACTCA            TCGGCCGAA CTC CTCGGCCAG            CTCGCGCGACCGGCG  44 2
CXD79_RS06495 1326759 .. 1326769 -  -3.2  -3.53811   GGGACCCCGTCGAAA                 TGCG TGA CACA                 TGACGCCGTGAATTG  49 103
CXD79_RS06490 NONE
CXD79_RS06485 NONE
CXD79_RS06480 1324329 .. 1324365 -   -13  -2.71791   ACTCGTGCTCCAAAT    GGCTCCGGCTCCGG TAGTGCGAC CCGGAGCCGGAAAC    CTGGGCGTACGTTGA  67 72
        livH NONE
        livM NONE
CXD79_RS06465 NONE
CXD79_RS06460 1320427 .. 1320437 -  -8.2  -3.60098   ATCGCCCACCTGAAA                 GCGC GCG GCGC                 CGATGCCGTGGTGCT  63 267
CXD79_RS06445 1318272 .. 1318310 -  -4.4  -3.53012   TCGGCCGCGGCGAAA   GCATGCTGACCACGATGT TCT ACATCGTGGCAGGCCAAC   TGGTGTGCAGCGCCG  52 338
CXD79_RS06435 NONE
        trxA 1310087 .. 1310128 -  -2.1  -4.06864   GGGAGATAAGAAGAA GGGTTCGGGCGGCGGGCC ACGGACG GGCCCGC-GCGGGAATCA GGGGGGAATGCGCGG  58 66
         rho 1308754 .. 1308771 - -14.1  -4.54727   GCCCGCAAAGCAAAA             CCCCGGC GCGG GCCGGGG              GTCGGGACGGGCGTG 100 54
CXD79_RS06395 1302176 .. 1302188 -  -4.7  -4.09243   GACATGGCGTGAAAA                GCGGC TTT GCAGC                GGGGAAAAACCGTTA  62 38
CXD79_RS06390 1301328 .. 1301340 -  -6.2  -4.11501   CCAAATACAAGGAAA                CCGC GCGCG GCGG                GTTGGCGGTGAATAT  69 191
CXD79_RS06380 1297953 .. 1297992 - -11.5  -3.05384   GTGCGGGCCATGGAA GCG-CGCCTGCAGCAGGGCG GCG CGCCC-GCC-CAGGCATCGC GCATCGTGGTGTATC  62 181
CXD79_RS06360 1292787 .. 1292820 -  -5.2  -3.14963   GGCATAACGAGTGAA     GCGCTGGACTGCGA ATTGCG TGGCAGTCTAGGGC      CTGGCCGGCGCCGTG  49 133
CXD79_RS06355 NONE
CXD79_RS06350 1291573 .. 1291583 -  -4.6  -4.07568   CGCTTCGCGCGAAAA                 CGCG TAA CGCA                 CGTGCCGGCCGCCTC  62 92
CXD79_RS06305 1279965 .. 1279988 - -11.7   -4.8622   CGCGCCAATGAAAAA          GGCCCGGCA GCGATG TGCCAGGCC           TTGATCAACGATTTG 100 39
CXD79_RS06295 1277316 .. 1277332 -  -5.7  -2.64472   GATGTCGGAAATCCA              GGCGGCC TAT GACCGCG              GCATCCTGCGCATCA  45 268
CXD79_RS06285 1275705 .. 1275715 -  -5.4  -5.69473   GATATCAGAAAAAAA                 TCTC GAT GAGA                 AATGGGGGACGTGCA 100 300
CXD79_RS06275 1275520 .. 1275541 - -17.3   -4.8622   GCGCCCAAGCAAAAA           GGGCAGCCC GGAT GGGCTGCCC            TTTTTTTCTGGTGCC 100 34
CXD79_RS06255 1272574 .. 1272588 -  -4.2  -2.73124   GTTTAGGGTTGAAAT               GACTGG CTC CTAGTC               TAACGAACTGCCCGG  41 71
        kynB NONE
        kynA 1270873 .. 1270909 -  -3.5  -3.40403   CTTCTTTCATGATAA    TTTCCCAGGTTAGCGGG TCG CCAGCCAGGCCGGGCAA    GCAGCCCGGCGCACG  49 152
CXD79_RS06240 1270553 .. 1270568 - -10.4  -5.86061   CGCGAGGAAAAAAAA              GCAGCC CGCA GGCTGC               TTTCTGGTGCGCCTC 100 58
CXD79_RS06235 NONE
CXD79_RS06230 1267207 .. 1267224 -  -6.9   -3.9777   GCCAAGAGCGAGAAA             CACGCCA AGAG CGGCGCG              CATCACGGTGCCCAC  66 147
CXD79_RS06210 1262891 .. 1262907 -  -9.3  -2.73364   CCGTCACCGTAATCA              GCGCGCC GCC GGCGTGC              CCAGGCTGGCGGCCA  55 6
CXD79_RS06205 1262032 .. 1262066 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS06195 1260190 .. 1260222 -   -17  -3.01791   ATTCGGCCGCCAAGA     GCGCCCTGGT-CGGG TGCA CCCGCACCTGGGCGC      TGGAACTGGCCGAGT  82 290
        hpnC NONE
        hpnD NONE
CXD79_RS06170 1254889 .. 1254901 -  -4.7  -2.93073   CCGGCTCAAGAACCA                CGTCG CGA CGCCG                GCCTGAGGAGTCTTC  44 450
CXD79_RS06145 1251765 .. 1251775 -  -3.2  -3.45366   CGGTCAATGAATGAA                 TAGC AGT GCCA                 GCACGACCGGGATGA  48 3
CXD79_RS06140 NONE
CXD79_RS06135 NONE
CXD79_RS06130 NONE
CXD79_RS06125 1247798 .. 1247826 -  -6.6  -3.28712   CGCGGTGCGCGACAA       GC-TGGCCCAGGC GTTC GCCCAGGCCGTGC        GCGATCCGGCCACGG  52 184
CXD79_RS06110 1243967 .. 1243979 -  -4.7  -2.72344   CGGGATGTGCAAGCA                GGCGG CTG CGGCC                GGGGAGATTGTCCAT  43 499
CXD79_RS06090 1240774 .. 1240798 - -13.6  -3.30771   CGACATCCGGCACAA         GGTGCGGCTCG ATGG CG-GCCGCACC          GAACTGGCCGTAGGG  74 251
CXD79_RS06060 NONE
CXD79_RS06055 1230222 .. 1230253 -  -2.7  -3.14931   GGCAGCCCGCATGAA      TCCGGCGGGCCAC GAGGTA GAGGTCCGCCCGC       AGGGCTGGCGGTTCG  43 364
CXD79_RS06020 1226775 .. 1226798 -   -16  -3.21416   GAGCGCTACCAGGAA          GCGCTGCGCGC CTG GCGCGC-GCGC          CATCCCGAGGCGGCA  80 66
CXD79_RS06000 NONE
CXD79_RS05995 1223162 .. 1223189 -   -14  -4.56597   TTGGTTGTCGAAAAA        GCCGCGGCGGGC GCGG GCCCGCCGCCGA         TCGGGTTGCGCTCAG 100 37
CXD79_RS05990 1222239 .. 1222278 - -11.5   -2.9162   GAACTCCGGAAACGA CTG-CACGGCG-GCGCC TTGGTGGG GGCGCACGCCGCGGCAG  GATGGCGCGCCAAGG  63 69
CXD79_RS05985 NONE
CXD79_RS05980 NONE
CXD79_RS05975 1220018 .. 1220050 -  -5.3   -2.9296   GAAAGCCCAACCATA      CCATCGCCCCACGGC GCC GCCGCCATGCGCCGG      TTCATGGCGCCGCGG  46 65
CXD79_RS05970 1218720 .. 1218767 - -14.1  -3.61517   ACCTGTGTCGAATAA CGCACGGGCCGCCGGCGCACGCG CGGG CGCGCGCGCCAT-GGCC-GCGCA AGGCGGCCGCGGTGC  78 300
CXD79_RS05965 1217791 .. 1217805 -    -7  -2.85668   TATCCGCATACCATA               GCGCCG CGC CGGCTC               GTTGCCAAGGCATCC  50 53
CXD79_RS05950 1214511 .. 1214531 - -10.3   -3.6502   CACCTCCTAGGGAAA            CCGGCGGCG GAT CGCCGCCCA            CGGAAAAGTCTAGCA  70 70
CXD79_RS05945 1213979 .. 1214002 -  -7.4  -3.06302   AGGACCTGCAGGGAA          TGCCGC-CCGC GGC GCAACGCGGCA          GCCCGGCCGTGGGCC  52 162
CXD79_RS05915 1207916 .. 1207938 -  -6.8  -3.29144   CGACCGCCGCTACAA           CGGCCTGGCC CTC GACGCGGCCG           AAGGCGAACGCATCG  52 305
CXD79_RS05905 1205906 .. 1205924 - -10.2  -3.44051   GTTCCACTACGAGAA             GGCGCGCA TGA TGGGCGCC             AAGCCTGCGGCCCCC  65 297
CXD79_RS05875 NONE
CXD79_RS05870 NONE
CXD79_RS05865 1197370 .. 1197419 -  -8.4   -3.9392   CTCCAGTGTAAACAA CCCGCCTGCCGCGCCGCGCTGGCGC TCA GCGCCCG-GCGGCGC-GC-GTCCCG CCGTACAGGCGCAGC  70 1
CXD79_RS05860 1196677 .. 1196711 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        bamD 1185654 .. 1185682 - -21.1  -4.08064   AACGGCCGCGCAAAA        GGAAAACCCGGCC TGG GGCCGGGCTTTCC        TTGGACTGCGCGAGT 100 45
CXD79_RS05790 1180982 .. 1181018 - -27.4  -2.71364   GGATCGGGGCAACGA   CGCAGGCGCCGCACCCG ATGA CGGG-GCGGCGCCTGCG    TTGCGATCAGCGCTT 100 32
CXD79_RS05765 NONE
CXD79_RS05760 1176274 .. 1176284 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 91
CXD79_RS05755 1174766 .. 1174784 -  -8.9  -3.28924   CACGGTGGCCGACAA             GGAAAGC GCGCT GCTTTCC             GGCCAGATCGATACC  59 511
CXD79_RS05745 1173157 .. 1173174 -  -2.5  -3.58343   TCGAGCATCGCGAAA             TCCGCGC CCAG GCGCTGG              CCGGCTCGGTCGTGT  50 376
        mdeB 1160776 .. 1160813 - -20.6  -3.06796   CTGCACCGCAGCGAA   GACGGCATCGGCCGGG CCACGT CCCGGCCGATGCGGCC    GTCACGACTGCCAGG 100 27
CXD79_RS05705 1158211 .. 1158228 -    -4  -3.04144   TTTGCATGGGTAACA             CGGGCG TCTTGG CGCCAG              AAGAGTTATGGAGCC  44 175
CXD79_RS05700 1157534 .. 1157544 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS05690 1156162 .. 1156192 -  -6.8  -3.65046   CCTGTACGGCAAGAA      GCGCCTGCGC-GA AATCGA CCGGCGCATGCGC       TTCCTGACCAAGCGC  57 363
CXD79_RS05630 NONE
        recJ 1136598 .. 1136609 -  -7.2  -3.65812   CGGTTTGTAACAGAA                GGGC GGCG GCCC                 TCAGGCGGCGTGCTC  61 26
CXD79_RS05620 NONE
CXD79_RS05615 NONE
        lysS NONE
CXD79_RS05605 NONE
CXD79_RS05560 1121288 .. 1121306 -    -8  -3.53012   CCTCCTTGCTGCAAA             GCGGCGGC GAT GCCGTCAC             GCGGCAGATGCTGGC  58 170
CXD79_RS05540 1117383 .. 1117403 -  -2.5  -3.31144   CCTTGACGCGCAGAA            TCTCGCTGA CTT TCAACATGA            TGTTCCTCCCGGGGC  44 60
CXD79_RS05535 1116884 .. 1116894 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 74
CXD79_RS05530 1115661 .. 1115686 - -16.9  -3.12595   TGCAATGATGCAATA         CGCCGCGACGCA GAT TGCG-CGCGGCG         TGCCGCTGCGCGTGA  80 219
CXD79_RS05520 NONE
CXD79_RS05515 1112541 .. 1112551 -  -4.6  -3.30124   CGCTATCGCGCAGAA                 CGCC ATC AGCG                 GGCCGAACGCCTGGC  49 374
CXD79_RS05490 1109699 .. 1109714 -  -4.6  -2.57132   GCGCCGCTGGATAAG              GGGTGG ATGG CCAGCC               AACCGTTACAAGTTG  42 53
CXD79_RS05485 1107605 .. 1107621 -  -2.2   -2.8372   TATTTGCCATGAAAC              CTTAGC AGCAG GCTCAG              ACCGCGGCCGCCGTA  40 22
        folP NONE
CXD79_RS05475 1105360 .. 1105379 - -16.4  -5.06414   CCCGCGCAACAAAAA            GGCCCGCC ATCA GGCGGGCC             TTCGGGCAGGTCCGG 100 48
CXD79_RS05470 1104231 .. 1104258 - -21.4  -3.48276   CCTGCCCCGATACAA        GGTGCCTGTCCC CGCG GGGACAGGCACC         CCAGCACCCCGTCGG 100 154
        ppk1 1100309 .. 1100328 -   -15  -5.09259   TATTTCAAAATAAAA            TGGCCGCC CGCG GGCGGCCA             GGCGGCAGCGGGCCG 100 43
        pstS 1099047 .. 1099068 - -10.1  -2.52464   CGCCCCGCGAAGTCA           GGACGGCGA TCGC TCGCCGTTC            ACTGGTCCGGCCAGG  56 68
        pstC NONE
        pstA NONE
        pstB 1096242 .. 1096276 -  -7.7  -3.49858   GCAACTATACCAGAA    TCGGCC-CGCCGGCCG GCCT CAGCCGAAGCGGCCGG     TGATGTAGTCTTCCG  60 9
CXD79_RS05435 1096009 .. 1096049 - -11.2  -3.86346   GCACGCCCGCAGAAA CGCGAAAGCCCCGAC-CGG AAAT CCGTATCGGGGCTTTGACA  TGCATGGAGCGGCTA  77 119
CXD79_RS05430 1094825 .. 1094863 -  -3.8  -3.32844   GTTCGCACGCGAGAA  CGGCCGG-GTGTTCG CCTATGTCAT CGAGCACGCCGGGCG   GCACCCCGACCCCGA  47 104
CXD79_RS05405 1088449 .. 1088459 -  -8.2  -3.53091   ACCCGTTTGCCGAAA                 GCCC GGT GGGC                 GCGCAAGGGCTGATG  61 336
CXD79_RS05390 NONE
        cobA 1082381 .. 1082421 - -14.7  -3.32498   TACGGTACACACCAA CGGCATCGCGCACCGCAC CGAACT GCGCGGCACGCG-CGCCG  AACTGGGCCTGGGCA  79 220
        queA NONE
CXD79_RS05335 1073559 .. 1073585 - -12.3  -2.70932   GGCGCGGCGCAACGA        GGGCCGCGCCGCC GGG GG-GGC-CGGCCC        TAGTCGACCCCGCGC  65 25
        yajC 1073067 .. 1073085 - -17.4  -3.65046   GGGTGAGCGGAACAA             GGCCCCGC CAC GCGGGGCC             TTGTGTGACCTTACA  91 36
        secD 1071095 .. 1071120 -  -2.5     -3.37   TGAATCCGGAAAAAT         TCCATGTTTCGC CTT GCGTATCA-GGA         CGGCGGGCGGCAGGG  46 54
        secF 1070112 .. 1070141 - -22.2  -5.81412   TGCATGTAAAAAAAA       CCCTGCCCGGCC GCATTT GGCCGGGCAGGG        TTTTTTACTACCGGG 100 48
CXD79_RS05315 1068414 .. 1068437 -    -8  -3.61398   CTGGGTGCTCAAGAA          CGTCGTGGCG CGCG CGCCCCGAAG           TGCTGCTTGACGACG  60 403
        miaB NONE
CXD79_RS05300 NONE
        ybeY 1064915 .. 1064950 -  -5.3  -3.31905   ATTTTGCATACAACA    GCGGCCATTGTTCCCC GATTT GGGGCGCATTGGC-GC    CAATCTGCGCGGCGC  51 43
CXD79_RS05290 NONE
CXD79_RS05285 1061846 .. 1061885 -    -5  -3.53444   CCATCCGCCGCGAAA GCGCCGCGGACCTGCTGC CCTGGT GC-GCAAG-CCACGACAC  CGGCGTCATCGTCTA  52 440
CXD79_RS05275 NONE
CXD79_RS05270 1060771 .. 1060784 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CGTAACTTCTACACC  51 54
CXD79_RS05265 1060665 .. 1060686 - -14.5   -5.7946   CCGGGAAGAAAAAAA           GCCAGTTGC TTAC GCAACTGGC            TTTTCGGAATTTTTT 100 40
CXD79_RS05260 1059220 .. 1059239 -  -4.8  -3.28712   GGTGCTGCTGGACAA            CGTGCCGC AGGA GCGCCGCG             ACGAAGCCAATTCGC  49 235
CXD79_RS05195 1047027 .. 1047061 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 493
CXD79_RS05185 1045776 .. 1045788 -  -4.7  -2.90496   GCCCGCGGGAAATCA                GCGGC GGT GCTGC                GGCGGACGGCTGGGC  44 10
CXD79_RS05180 1045346 .. 1045373 - -11.2  -2.75074   TGCACTGGAACATCA        GCCTGAACGACG CGCG CGTCGATCCGGC         CATCTTCATCGGGGC  59 70
CXD79_RS05140 NONE
CXD79_RS05135 1038123 .. 1038133 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 238
CXD79_RS05130 1036900 .. 1036917 -    -4  -3.60805   ACAGCGTAGCGCAAA             CCGGGC CGTCCT GCCCGC              CGGCGTGGCGCGCGG  51 44
CXD79_RS05125 1036147 .. 1036168 -  -8.1  -3.64599   CTATTACACCGCAAA           CGA-TGTTGC GGT GCAACATTCG           TGTGACCGGGGCGCC  63 48
CXD79_RS05120 NONE
CXD79_RS05115 NONE
CXD79_RS05110 NONE
        fabI 1030311 .. 1030322 -  -7.2  -3.33483   GATCGAAATCATGAA                GCGC CGCG GCGC                 CGAGGTGCCGATTCC  55 470
CXD79_RS05085 1025382 .. 1025392 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS05080 1024358 .. 1024371 -  -3.1   -4.2074   CTCCCAAGAGAGAAA               GGCTT CTTC AAACC                GGGCAGCTAGTTGTG  63 32
CXD79_RS05075 1023080 .. 1023106 -   -13  -4.65895   CGCCGGACGCAAAAA        CGCCCGG-CGC GGTGAG GCGGCCGGGCG         TACGTACTGCCATGG 100 79
CXD79_RS05055 NONE
CXD79_RS05050 NONE
        folD NONE
CXD79_RS05040 1011008 .. 1011043 -   -19  -2.59431   GGCGTCCAGAAGTCA    GCAGGTGCCAGTCCCC CTGC GGGGACAGGCACCTGA     GAGGTCAGGCTTGCA  87 30
CXD79_RS05035 1010223 .. 1010240 - -14.1    -3.965   GCGCAAAAGCAACAA             CCGCGCC CTGG GGCGCGG              TCCGGATCATTGGGT  84 32
CXD79_RS05030 1009801 .. 1009831 - -25.6  -4.07568   CGCGGCCGTCCAAAA       CAGACAGGCCGGCA AGA TGCCGGCCTGTCTG       TTTGCGCAGTGGCGA 100 44
CXD79_RS05010 1003311 .. 1003340 -  -4.3   -4.1822   CGCGAGGGCAAGAAA       CGCCAGATTCGC CGCATGT GCGAA-CTGGTG       GGGCTGCGGGTGGTG  63 182
CXD79_RS05000 1002070 .. 1002098 - -10.2  -4.07885   GATTCTGCGTCAAAA       CCGCCG-GCGGCG TCAG CGCGGCGCGACGG        GCGCGCGCGCCAGCG  78 9
CXD79_RS04990  999332 ..  999348 -  -2.2  -4.42238   GCAGTTGAAGGAAAA              CATCGA GAGCG TCGAGG              TCACCCTGTCGGACG  68 234
CXD79_RS04980  996894 ..  996905 -  -7.2  -3.78953   AGGCCCAGGAGGAAA                CCGG CCTG CCGG                 TGCAGCAAGTGGAAG  64 435
CXD79_RS04965  994292 ..  994312 -  -8.1  -3.01712   CGTGGTCCGCGAAGA            GCCGGGGCC TCG GGGCCCGCC            GGCTTCAACACCAGG  53 438
        mltB  978658 ..  978670 -  -4.7  -3.57144   CCGGGCATCCGCAAA                TGGCC CGA GGCCT                ACATGCCGAAGATCT  54 322
CXD79_RS04810  961401 ..  961421 - -18.3   -5.4505   CGCGGCAAGAAAAAA            GGGCCTCGC TAT GCGAGGCCC            CCTCATTGTAGCGGC 100 52
        ubiG NONE
CXD79_RS04800  959867 ..  959889 -  -2.7  -2.77899   TGGGTGGAGCAATCA          GTGGCCGG GTGTGGCG CCGGC-AC           GGGCATGGGGCCCGC  40 59
CXD79_RS04795 NONE
        ssrA  958043 ..  958065 - -13.6  -5.85178   AACAGCCAAAAAAAA           TAGCCAACTT TTG AAGTTGGCTA           TTAGGTAAATACTTG 100 57
CXD79_RS04785  957770 ..  957798 -  -6.9  -3.02471   TGTGTACTATACACA        CTTTTAATGTGTA TAG TACACATTAACAA        ACTATTTTGCCCCGC  51 19
CXD79_RS04780  957541 ..  957567 -  -7.9  -2.84298   GACAGTTCACAACTA         GCAGGCCCCGA TTGCT TCGGGGCTTGT         GTCTCACTTCAAACC  52 29
CXD79_RS04765  956002 ..  956039 - -11.3   -3.6682   TGCTACCCACGCAAA   CGAGAGCCCCGATACGGA TTG TCCAG-TCGGGGCTCTCT   GCTGGGTGCGTCGGA  73 55
CXD79_RS04755  953582 ..  953616 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS04740  951024 ..  951057 - -13.1   -3.0497   AGAGTATCTGGAATA     CCGACGCGCTGCGCGC CAT GCGCGAAGCG-GTCGT     GTACGGAGTGCCGTC  70 111
CXD79_RS04730  948510 ..  948520 -  -2.4  -3.02381   GCAGAACACCATAGA                 CCGG CAT CTGG                 GGGAATTGGTTTCCG  41 119
CXD79_RS04725 NONE
CXD79_RS04715 NONE
CXD79_RS04710  943468 ..  943499 -  -5.6  -3.14132   CGTGGGGGCGAGCAA      GCCGCGCCACCTGG AGGA CGCGGTGGCGGCGC       TGGCCCTGCGCCTGA  47 102
CXD79_RS04695  939731 ..  939750 -  -2.8  -3.53761   CAAGGGGCGGCGAAA            GCG-CGC ATCTTGG GCGTCGC            GGGGGCGCTTGTCAA  49 37
CXD79_RS04690  939124 ..  939158 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGACTTACGC  48 191
CXD79_RS04590  918633 ..  918644 -  -5.8  -3.53811   TCGATCTGCCCGAAA                CCCT GACC AGGG                 TGCAGCGGCGCGATA  57 414
CXD79_RS04580  917098 ..  917145 -  -4.1  -2.71712   GCGCGGCGCCGAAAT CGCTACACTGGACGTACGGGCGCG CGC CG-GCGCAT-CGGCC-GCGCAGCG CCCAAGGAGGCGATC  41 220
CXD79_RS04560  913722 ..  913756 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS04545  910103 ..  910118 -  -3.2  -2.87132   TGGCCTCCTTACAGA              TCCTCG GAAC CGAGCA               GCATCTCGGTCAGCC  41 3
        ilvN  909568 ..  909595 -  -8.2  -2.55074   GTGAATGCTAATGCA        GGGTGGCGCGCC GCCA GGCGCGCCGGTC         AGATTTTCAGTATCC  52 24
        ilvC  908438 ..  908455 - -14.1  -5.79595   GCGGAAAAGAAAAAA             CGCGCCC CGTG GGGCGCG              TCTGGACCAGCCTGC 100 75
        pssA  907371 ..  907384 -  -8.1  -3.27022   GCCAGCCGAGATCAA               GCAGG TCGG CCTGC                CCAGCGTGCGCCAGG  56 199
CXD79_RS04520  906781 ..  906804 -  -4.5  -3.63367   GGTTTCAAGAAAAAC          GAGC-CCCGA GACAA CCGGGCGCCC          TGTTACGCTGTTGCC  55 28
CXD79_RS04515  906385 ..  906420 - -16.8  -5.04601   CTTACAAATGAAAAA    CCGTGGCCGTTGCGAC ATGC GTCGCCCCGACCACGG     TTGCGTCATGGGGAG 100 54
         pnp  904157 ..  904174 - -14.1  -4.66163   ATGCGGACGCAAAAA             CGGCGCC CGCG GGCGCCG              TTCTTGCGTCAGGAA 100 50
CXD79_RS04505  903159 ..  903193 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS04495  900720 ..  900743 -  -3.7  -3.73775   CGCAGCCTTACGAAA          CGGGGCTGC GCTACA GCGACCCCA           AGGATTTCCATGTGA  55 336
CXD79_RS04480  898793 ..  898825 -   -14  -4.66318   ACCAGGGCAAGAAAA      TCCGGGCGCACCGG GCGAT CCGGCGCGCCCGCC      GTCCGGCTGGCGCTA 100 38
CXD79_RS04475  897933 ..  897945 -  -5.5  -3.02074   CAAAGACATTACAGA                CTCCG GAA CGGAA                ACTTAAGCTGCGGCG  47 28
        secG  897441 ..  897470 -    -3  -4.09685   CGGCATCCTGCAAAA      CTTCGACCAGGATC CGAA GATCCTGG--AAAG       TCGGGCATTCTAGCA  59 35
CXD79_RS04465  897259 ..  897284 - -13.3  -4.91109   CCTGGACGACAAAAA         GCCCATAGGCG CTGA CGCATATGGGC          TTTTTTGCTGGCTTT 100 86
CXD79_RS04460  894338 ..  894363 -  -2.4  -3.58343   CGGAGCATCGGGAAA         CCGAACTGGC GCAACT GCTGGTCCGG          GAGGCCGGGGCCCTG  50 123
CXD79_RS04450  892100 ..  892138 - -12.4  -3.87994   AGTGATGCCGACAAA  CCGCCCGCGCCGT-GCG GACGGA CGCTACGCCGCGGACAG   GCGCGTCCGATAGGA  81 11
CXD79_RS04445 NONE
CXD79_RS04440  889126 ..  889136 -  -2.4  -3.35679   CGGCCCGATCGAGAA                 TCGC TTC GCGC                 AGGGCCAGCACCGAC  46 494
CXD79_RS04430  886929 ..  886957 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGTGCGGTGG  56 91
CXD79_RS04425  885447 ..  885461 -  -5.6  -3.53091   AGGCGTGCGGCCAAA               GCATCG AAG CGCTGC               GCGAGGAACAGCAGC  52 374
        metC NONE
CXD79_RS04405  881332 ..  881390 - -18.7  -4.56597   TTCTTCGTTGAAAAA GGCCACGCGCCGCGGGCGCGGGCCGAACG CAA CCACCGGCGC-CGCCCGCGGCGC-CGGAC CTGCTCGAATCGGAA 100 66
CXD79_RS04400 NONE
CXD79_RS04395  878234 ..  878246 -  -3.3  -3.63627   CGTTCAGATGCGAAA                CGCCA CGG TGGGG                TCGGACCGGACCTTG  53 1
CXD79_RS04370  870824 ..  870848 -  -5.6  -4.00042   CGCGCCATCAAACAA         TGCGGC-CGGC CCGC GCCATGCCGCG          CAACCCATGCTGCAA  63 63
         azu  870113 ..  870134 - -11.5  -2.62184   TGTTTCGCGAGATCA           TCGGCCCGC AGGC GCGGGTCGA            GCGGGCCGAGCACAT  59 142
CXD79_RS04335 NONE
CXD79_RS04330 NONE
CXD79_RS04325  859019 ..  859032 -  -3.7  -4.35461   TCAAGACGATGAAAA               GGGGC TCGC GCCCG                CTCAGGCCGCCGCGT  68 59
CXD79_RS04320  858091 ..  858113 -  -3.3  -3.38046   TGGGTATCCGAAATA           TGCAGCACG CGCAT CATGCCGCC           TCCAGCCGCTGGCCA  48 16
CXD79_RS04315  857269 ..  857283 -  -9.2  -3.14795   AAAGGTTCACGAACA               GCGGCA TCG CGCCGC               GGCGCGCGTCATCCG  59 34
CXD79_RS04310  856275 ..  856290 -    -6  -2.66326   TGAACGGGAAATCGA              CCGCAC CCTG GAGCGG               TTCAGCGACGGCAAG  45 207
CXD79_RS04280  852533 ..  852568 - -26.4  -4.24326   AAACATGATTCAAAA    GCGAAAAAAGCCGCCC CGAA GGGCGGCTTTTTTCGC     GCGGGCACGAGGCCC 100 86
CXD79_RS04275 NONE
CXD79_RS04270  851546 ..  851562 -    -5  -3.05384   GGCGGCGCGATCGAA              CCGCGC CGCCC GCGCCG              GTGGTTCAGCGCGCA  45 31
CXD79_RS04265 NONE
CXD79_RS04260 NONE
        nuoE NONE
        nuoF NONE
CXD79_RS04245 NONE
        nuoH NONE
        nuoI NONE
CXD79_RS04230 NONE
        nuoK NONE
CXD79_RS04220 NONE
CXD79_RS04215 NONE
        nuoN NONE
CXD79_RS04205  837400 ..  837416 - -13.7  -5.78622   GTAGGCGAAAAAAAA              CCGCCTC ATG GAGGCGG              TATCGCTGAAGCGGC 100 50
CXD79_RS04200  834862 ..  834882 - -11.8  -4.98531   GCCGGAAATGAAAAA            CGGCCCCC TTGCG GGAGGCCG            TCGGAACGGCGGGGT 100 52
CXD79_RS04195  832387 ..  832403 - -15.1  -6.09133   CATGCCAAAAAAAAA              CCGGCGC AAT GCGCCGG              TTTTCCCTGCTGCGC 100 49
CXD79_RS04190  831526 ..  831555 - -10.6  -2.65808   ACCGCCAAGAACGCA       GTCGTCGGCCTG ACCCGG CAGGCCGCCGGC        GAAGTGGCCGAATTC  55 266
CXD79_RS04170  827010 ..  827039 - -23.7  -3.03006   AGTAAGCCACACATA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        ATGAACACTTGACGG 100 114
CXD79_RS04155 NONE
CXD79_RS04150  821405 ..  821415 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS04140  820356 ..  820387 -  -8.7  -3.61398   CCTGGGTTCGAAGAA      CGAGGTGG-AGCGC GTGGG GCGCTACCACGCCG      AAGCGCACGCCAGCT  62 39
CXD79_RS04125  815818 ..  815828 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS04120  814758 ..  814779 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CXD79_RS04115  813617 ..  813636 -  -4.4  -3.45571   GTGGGGAAATATCAA            TGTATACA TGAC TATATACA             TCAATGGATATCGGC  51 162
CXD79_RS04110 NONE
CXD79_RS04105 NONE
CXD79_RS04100 NONE
CXD79_RS04095 NONE
CXD79_RS04090 NONE
CXD79_RS04085 NONE
CXD79_RS04080 NONE
CXD79_RS04075  804325 ..  804365 -  -3.6  -3.65046   TTGTCATTGTAATAA  CTCCTGGCCGGGCGCCGG ACGGG CCGGCGGCGGGCGCCGCG  CGGCCCGCCGCTCGA  54 44
CXD79_RS04070  803443 ..  803456 -  -5.9  -2.78935   ATATCGGCCAGTATA               GCGGC GGCA ACCGC                GAGCACACGGGTTCG  46 86
CXD79_RS04055 NONE
CXD79_RS04050  798845 ..  798856 -  -5.8  -3.01712   GTGTTGGCTTGAACA                TGCC TCAG GGCA                 TGTAGAAGCCGCCGT  47 18
CXD79_RS04045 NONE
CXD79_RS04040  796685 ..  796696 -  -5.8  -3.93695   TTCACCAGCGAGAAA                GACC TGCG GGTC                 AATCCGCTGGCGCAA  63 522
CXD79_RS03980  780841 ..  780860 -  -4.3  -2.71144   TACGGCCGCGAAGGA            TCGCGCCA TGGCC TGGC-CGA            GTACATGCAGATCAA  40 84
CXD79_RS03945  770756 ..  770781 -  -8.9  -3.70902   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG  65 63
        rplU NONE
CXD79_RS03920  767243 ..  767264 - -17.3  -5.45802   GCCTGAAAACAAAAA           GCCCTGCCG CGTG CGGCAGGGC            TCGCCGTTCCGGGGA 100 53
        obgE NONE
CXD79_RS03910  764743 ..  764765 -  -4.1  -3.13073   ACGGTCAGGAATACA           GGACAAATC GGAGG GGCTTGTCC           GGCATGTTGGTTGGT  45 62
CXD79_RS03900  763017 ..  763051 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 310
CXD79_RS03885  761686 ..  761709 - -10.2  -4.41348   TCTCGCTGAAATAAA          GGCGCGCGCCC GGT GGG-GCGCGGC          AGGGGCATTATTCCA  88 56
CXD79_RS03880  759304 ..  759314 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 183
CXD79_RS03875  758238 ..  758282 - -10.6   -2.8294   TATGGTGCACAAGCA CCTCACGCGC-GCGCTA-CGGC ACT GCCGCTCCCGCTGCGCGCGTGG GAACACGGCGCCGAT  57 43
CXD79_RS03865  756573 ..  756603 -  -6.2  -4.27584   ATGTTTAACCGAAAA       GAGATTGAAAGTAA TTA CCACTACCAATCTC       TAAGACGGAACGGCC  70 135
CXD79_RS03860  753944 ..  753957 -  -3.7  -3.36803   CAAGGGCATCGACAA               GCCGG TGGT CCTGC                AGGCGCGCCGGAACG  47 217
CXD79_RS03835 NONE
CXD79_RS03830  747337 ..  747360 -    -3  -4.17556   GAGATCCGCAAGAAA          GTCGAACAGG CGCG CGTGTCCGGC           TACGCCGTCACCATC  61 285
CXD79_RS03820  744865 ..  744875 -  -6.8  -3.09516   CGCCGCAGGATGTAA                 CCGA ACA TCGG                 CCGCCCCTTGTGGAT  52 101
CXD79_RS03815 NONE
CXD79_RS03810 NONE
CXD79_RS03805 NONE
CXD79_RS03800  739950 ..  739960 -  -2.4  -4.41348   GGGCTGGGAAATAAA                 CGGG TTA CACG                 GGGTCCACCGGGACG  65 19
CXD79_RS03795  738322 ..  738361 -  -5.7  -3.54408   TCCCAGCGAAATGAA CTGCTCGGTCG-CGCTGTC GGCC GACAGCGACG-CCGAACTC  CTGGAAGCCGCGGTC  57 197
CXD79_RS03785  736956 ..  736966 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 121
CXD79_RS03780  735896 ..  735917 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CXD79_RS03770  734678 ..  734705 -  -6.2  -2.79188   CATCGAAGGCAACTA        CGCCAACG-GCCG CCG CGGCACGCTCACG        CCCGATCCGCTGGCG  46 163
        lptD NONE
CXD79_RS03745 NONE
        rsmA  727091 ..  727129 - -10.3  -3.01712   CGCTGCGCGGCAAGA  CCCCGGCCGGCG-TGGC CCGCATC GCCAGCGCCG-CCGGCG  TGCCGGTGGTGGCGC  59 254
         pyk  724172 ..  724205 -  -5.2  -3.61398   GGGCGCCTGGAAGAA     GGTGCCGGTCTACGA GACCT TCATCG-CCGGCGCC     AAGGACGGCTTCAAC  54 454
CXD79_RS03640 NONE
CXD79_RS03635  707938 ..  707975 -  -6.1  -2.66787   GCAACAGCGAGATGA   GCAGCGCCCGGGCCCACC AGC GGCGTGCGCG-ACGATGC   GCGCGAACGCTCAGC  46 36
CXD79_RS03625  706675 ..  706690 -  -6.2  -5.00616   TTGTGGCCCAAAAAA              CTGTAT GGAC ATACAG               TGTATGCGAGCATAG  86 294
CXD79_RS03610  705853 ..  705875 -  -7.6  -3.63991   GATGACGCTCAAGAA           TTGGCCGCCG CTG CGGCCGCTAA           TGCTGTTGGCGCTCG  60 278
CXD79_RS03490  689266 ..  689285 -  -4.2  -2.91274   CTCAGCTGAAGCATA            GCTCGGTGA AGG TCGCCG-GC            GGCTTCGGTCCGATC  43 161
CXD79_RS03445 NONE
CXD79_RS03440 NONE
CXD79_RS03435  680866 ..  680883 -  -3.3  -3.54424   GTTGACGCCCTGAAA             GCGTTCGC GCA GCGC-CGC             CGCTTCTTCCTCGAT  49 52
CXD79_RS03430  679782 ..  679797 -  -4.6  -3.01712   GGGGTCTCTGCAACA              CGTGCC CCAG GGCACT               GTTGGTTTTGCGCTG  45 47
CXD79_RS03425  679384 ..  679399 -  -3.2  -3.94438   CATGCTAACAAAATA              GCAAGC ATAT GCTTTC               TTCGGATGTCGGGTG  58 167
CXD79_RS03410  676171 ..  676194 -   -21  -2.60496   GGCGGCCTGAAACAG          GGCCGCCGCG CCAG CGCGGCGGCC           GCGCGCTTGCTTACC 100 36
CXD79_RS03375  669786 ..  669826 - -12.4  -2.73875   TTCCTCGGAATACGA CCCTGAAGC-GGCGCGCGC CCGG GCGCGCGCCGGCCACTGCG  ACACCCGCGCTCAGC  65 36
CXD79_RS03370  668312 ..  668341 - -15.7  -3.01712   CCCCTGGCTGGAAGA       GGACGCGGCG-GCC TGA GGCGCGCCGCCTCC       GCGTGCGTCAGGCCA  77 33
CXD79_RS03355 NONE
        recQ  663860 ..  663887 - -16.2  -3.14344   GACGGCGCGCACGAA        GTGGCGCGCCGC TCGC GCGGCACGCCGC         GTATCGCCAACCGCC  80 410
CXD79_RS03340  662020 ..  662038 -  -6.6  -3.40403   TTCCGCCGATGACAA             GGATACGC ATC GCGCAGCC             CCCTGTAGCATCATT  55 90
CXD79_RS03335  660885 ..  660915 -  -6.6  -3.39784   GCATCGGCAAGAAGA       CCGCGGAGCGCCTG CTG CTGGAGATGCGCGG       CAAGCTGGGCGCGGA  55 228
CXD79_RS03300  655060 ..  655113 -  -6.5  -3.18264   CTGGTGACCGAGGAA GGCTGCGAACTCA-TCACCCGCGGCG TGC CGGTGCAGGCGCGCGAGATCGAAGCC CTGATGCGCGAATAG  51 50
CXD79_RS03290  652217 ..  652241 - -14.3  -2.87132   TGCGCGTCGGACATA          CCGCACCCTGC ATG ACAGGATGCGG          CAGATGGGTGCTCTG  71 218
CXD79_RS03285  651489 ..  651503 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 215
CXD79_RS03275  649433 ..  649444 -  -2.2  -3.53566   AGCCAAGAAGAAAAG                CAGA CTGG TCCG                 ATGCCAAAACCCGCA  48 224
CXD79_RS03270  648184 ..  648222 - -18.8  -2.79831   GTCATCCGAAAACAG   CCAGCAGGTGGCGAGGCG CGA CGCCTCGCCGCCTGATTG   TAGTTGACGACGCGC  87 58
CXD79_RS03265  647247 ..  647279 -   -10  -3.53012   GCCCTGGGCCGCAAA     TACCACGGCCTGATT CCGG AATAAGGCCG-GGTA      TCGAAGCCGCGCTCA  67 38
CXD79_RS03255  644791 ..  644810 - -11.4  -3.21354   GCATACAGCCAGCAA            TCGCGCGG CTGG CCGCGCAA             CGCTGCCGGCATCCA  66 53
CXD79_RS03230 NONE
CXD79_RS03225  640678 ..  640692 - -12.8  -4.27316   CGCCCCAAGGCAAAA               GCCCCC CTG GGGGGC               AGCAAGCTGGCGCAG  91 69
CXD79_RS03220  638913 ..  638931 -   -11  -3.13403   GCTGGGCGAGGAAGA             CGTCGAGA ACT TCCCGACG             CTGCTGGTGCAGGCG  64 190
CXD79_RS03210  637794 ..  637804 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS03205  636754 ..  636779 -  -9.7  -5.00616   GGTTTCCGGAAAAAA         TG-AGGCCCCCC CCG GGGGGGCGTGCA         GGGCAATGCGCTAGA  95 36
CXD79_RS03200  635780 ..  635808 - -12.3  -2.87132   GTGGTTGCGGATAGA        TGCCGCCCCGGGG CGG CGCCGATGCGGCA        CCGCAACAAGGAGCA  66 139
CXD79_RS03195  634745 ..  634757 -  -9.1  -3.71917   ACCGGAAACCGGAAA                CGACC CCA GGTCG                CCTGTTAGTCAGGCT  68 183
CXD79_RS03190  630230 ..  630288 - -22.6   -2.5474   GAAAAGCAATAAAGG CCGCGTCCCAAT--G-CGGCCGGGCCGCGC ATC GCGCGGCCCGGCCGGCCGATCGGG-CGAGG CCTGCGCGCCCGCCG 100 57
CXD79_RS03180  628194 ..  628214 -    -9  -5.40072   CCTTGGGCAAAAAAA           GAGGCCACC CGAA GGTGGCC-C            GAATTCCAGCTCTGC 100 95
CXD79_RS03150  623356 ..  623378 - -16.2  -3.34715   GACGTGCTGGAAACA           GGCTGGCCCG AAC CGGGCCGGCC           GCCCCTCATGGTGTC  82 158
CXD79_RS03090  612268 ..  612316 - -13.8  -3.35679   CCCTTCCAGTGAGAA CGGGCCATCG-GCCCGG-CCGC TGTCGGC GCGGACCGGGCACGCCGGGCCG CAACGACCTGCGGCG  77 207
CXD79_RS03085 NONE
CXD79_RS03080 NONE
CXD79_RS03075  608576 ..  608625 -  -9.7  -5.07011   CAGATAAAGGAAAAA CGATCCCGGGCCGGGCGGCGTCC CGAC GGACGCCCGCCAGCCCTAATACG CGCCGCCGATGCGGT  95 18
CXD79_RS03065  605252 ..  605303 -  -3.6  -3.14132   GGCCTCGCGCATCAA CGCCTCCTACGCCG-ACCCGGC CTGGCTGGCC GCCGGGCGCGGC-TCGGGCGCG CTGTGAAGGGTGCAA  45 125
CXD79_RS03055  603419 ..  603435 - -13.7  -5.60993   CGCCTCAGAAAAAAA              GCCCTCC GCT GGAGGGC              TTTTTCGTGGGCCGC 100 47
CXD79_RS03040 NONE
CXD79_RS03035 NONE
        ftsY  595337 ..  595362 - -20.5  -2.90496   CCGTTCTGGAAATGA         CAACGCCGCCC GGAC GGGCGGCGTTG          CGGGCAGGCGCGAAC 100 46
CXD79_RS02955 NONE
CXD79_RS02950 NONE
        nusB  584876 ..  584908 - -11.1  -3.72695   ACTCCTGCCAGCAAA      CGCGAACGGACGCGC CGC GCGGGCGCGCCCGCG      GAAGGTCAGCGCCGC  73 31
        thiL NONE
CXD79_RS02935 NONE
CXD79_RS02930  582619 ..  582662 - -14.4  -3.28745   GCGGTAAGAACGTAA CCCCCCGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCGCTGAC TTCTCAGGGTGCCTG  75 119
CXD79_RS02905  575666 ..  575689 - -19.6  -6.06723   CTTCCCAAAAAAAAA          CCCCGCCAGG TTCG CCTGGCGGGG           TTTTTCATTGGAGCT 100 44
CXD79_RS02855  564942 ..  564952 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 192
CXD79_RS02845  563893 ..  563903 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS02840 NONE
CXD79_RS02835  561926 ..  561940 -  -3.4   -4.2828   CCGCATCCAGGAAAA               GGCGAC CGT GCTGCC               CGATGGCGGCGAAGT  67 245
CXD79_RS02820  559145 ..  559171 -  -2.8  -5.06103   ACAATTTGCAAAAAA         TAGCCAGACCGC TGG GCAGCCGGACAA         GCCGCGCTGCTCCCG  79 442
CXD79_RS02810 NONE
CXD79_RS02805  558362 ..  558405 - -22.8  -2.72471   GCGCCACCAGAGAAT TCAAAACAAAATGCCCGCAA TCGC TTGCGGGCATTTTGTTTTGT GCGCGATGAAGGACA 100 80
CXD79_RS02785 NONE
CXD79_RS02780  553517 ..  553530 -  -5.9  -3.30474   GTTCACAACTAGCAA               GGCCG GCTA CAGCC                AGCGCTCGAACAGGC  53 18
CXD79_RS02755  547790 ..  547812 - -12.7  -4.57569   TGATGTGCCCAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGCC 100 57
CXD79_RS02745  546844 ..  546872 - -15.4  -3.72576   CCTGCCTTCATGAAA       GCCCCGGTCAATC GCAT GATTG-CCGGGGC        TTTCTCTTTGCCGCG  85 46
         rnr  543831 ..  543856 -  -6.7  -4.08064   AACGCCGCCGGAAAA         CGGCGGC-GGGC CGG GCCCTGCGGCCC         GGTCTACGGTGCAAT  67 80
        rlmB  543015 ..  543037 - -12.6  -3.03124   TCGGACGTTCGAAGA           GGCGCGCGGC GCG ACGGCGCGCC           GCTGCAAGAGTTTAC  67 37
CXD79_RS02725 NONE
CXD79_RS02720  540936 ..  540950 -  -3.4  -4.66537   GCTGTCAAGAGAAAA               CAGCGC CCT GAGCCG               CGCCAATACTAGCTT  71 105
CXD79_RS02715  540408 ..  540420 -  -9.1  -3.64703   GTTTTGTTAGGCAAA                TCGGC AGC GCCGA                TTTGCCTTTGCGTCC  68 42
CXD79_RS02710  540153 ..  540186 - -12.4   -5.4505   GCGCGCAACAAAAAA    CCCCGTGCG-GTGCGC CGAT GCGCCCTCGC-CGGGG     TTATTGCGCCTGCTT 100 92
CXD79_RS02705 NONE
CXD79_RS02700 NONE
CXD79_RS02695 NONE
CXD79_RS02690 NONE
CXD79_RS02685 NONE
CXD79_RS02680  533771 ..  533783 -  -4.7  -3.69068   GGACGGCAAGAAATA                GGCGG CAA CCGCG                CGAGGGTGCCTGTCC  55 98
CXD79_RS02660  529245 ..  529303 -  -4.3  -3.15544   GGGCACCCGGACGAA TTGGCGGCGGGCCACTGGACGGTGGGCTA CGC CAGCCCACAGACCGGCCGCGCGCTGCC-- CTGGGAATGCGCCAC  45 331
CXD79_RS02630 NONE
CXD79_RS02625  523410 ..  523420 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS02620  522394 ..  522406 -  -4.7  -3.57144   GGCCCGAGCCGCAAA                GCGCC CCG GCCGC                TAGCTGTGAACTGTC  54 25
CXD79_RS02610  519994 ..  520022 - -13.1  -3.14564   GCAGCTGCGCATGAA        TGCCTACGCCACC CAT GGCGGCGTGGACA        AGAAGCGCTTCGAGC  68 275
CXD79_RS02580 NONE
CXD79_RS02575  514544 ..  514570 -  -6.4  -3.87373   CAGATCGGCCAGAAA         GGCCACGGCAAG GCC CTCGACTCGGCC         CACTGAGGGCCGCTT  62 50
         smc  509439 ..  509460 -  -2.9  -3.28447   TCACTCATGAGAATA           TCCCGC-GCC TAA GGCAGCGCAA           ATCCGAATATGGGTT  46 41
CXD79_RS02560 NONE
        ligA  506220 ..  506249 - -19.5  -3.15663   AGCCATCGCCATCAA       CAAAATTGCCCGC TTTC GCGGGCAATTTTG        TTTTCGGCTGCCGGG 100 59
CXD79_RS02530 NONE
CXD79_RS02525 NONE
CXD79_RS02520  502075 ..  502091 -  -4.3  -3.05471   AGTATCAAATAACCA              CCCCGAC CCC ACCGGGA              TCAACCCTAATCCGG  45 131
CXD79_RS02515  500702 ..  500725 - -19.6  -2.62735   ACACGGCGCATACGA          CGCACCGGCC CTCA GGCCGGTGCG           AGGTGAAGCAGGAGA  93 101
CXD79_RS02510 NONE
CXD79_RS02505  497426 ..  497445 -  -7.8  -3.29461   CAAGGGCTTCGACAA            CGCCATCA TGCT CGACGGCG             CGGGCCATGTCGCGG  55 392
        pncB  485618 ..  485635 - -14.1  -4.17048   GGTTGGCGAAAACAA             GCCGGCC CTCA GGCCGGC              GGAAGCTGGAACACC  91 16
CXD79_RS02435  485096 ..  485135 -   -18  -4.08945   ACCATCCCGGCAAAA  TGAAGGCATTGCGGCATC GGCC GATGCCGCAATGCCTGTA   CCGTCCCGAGGCGCG 100 114
CXD79_RS02420  481376 ..  481390 -  -4.2  -4.09685   CCGGAGCGTGCAAAA               GACCTA GTG TAGGGC               ACGCGGCCGCCCCCG  61 64
        argE NONE
        trpB NONE
CXD79_RS02405 NONE
CXD79_RS02400  477064 ..  477095 - -10.8  -4.67353   GCATGCATGGAAAAA      TAACAACGCCCGGC CTGG GCCGGGCGTTCGCA       GGCACTGCCGGCGGG 100 46
CXD79_RS02390  475058 ..  475111 - -13.7  -3.68359   GCCGGAAAATCATAA GACCACTCCTCGGGTGCCTGTCCCC GCAG GGGGACTGGCACCCGCCAATTGTCC CCGCTGCGGCAAGGG  80 86
CXD79_RS02385  473921 ..  473947 - -23.8  -3.92869   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 66
CXD79_RS02375  469301 ..  469313 -  -4.1  -3.42809   AATACCACCAACGAA                TAACC CAT GGTCA                GGCCGTCTCCAGTTG  49 23
CXD79_RS02370  468530 ..  468587 - -15.6  -3.27408   TCTTACCCAAATAGA CGGTGGCGTGCGCCGCGCTATTCCGTCGC CGG GCGACGG--CAGCGCG-CGCATGGCGCCG ATCCAGGTAAGACAG  80 75
        msrP  467528 ..  467544 -  -2.1  -3.16564   TGGGGACCTCAGTAA              TTGGCCC GCA GGTCCAG              GCCCTGGTAGAGGCT  42 2
        msrQ  466651 ..  466685 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS02345  464446 ..  464477 -  -5.1  -4.03234   GTTGCGGCATAGAAA      GCTGACGCCCGC GGCCGCCAG GCTGGCG-CAGC      TGGTGCGCGACCTGA  63 77
CXD79_RS02335 NONE
CXD79_RS02330  461488 ..  461537 - -13.5  -3.96148   GTTTTCCACGATAAA CGGCTGGCCCAGCGCCGCGGCCA GCTTTT CGCCCGCGGCGC-GGGCG-GCCA CGTCGGTGGCCTGGC  84 219
CXD79_RS02320  460409 ..  460426 -  -2.7  -3.14132   CTGCTGCTGGACGAA             GGCAA TGCCTATC TTGCC              GCGGGCCTGGCCGGC  43 303
CXD79_RS02310  459046 ..  459091 - -10.4  -3.05384   CCCTTGCCCATGTAA TGCGTGACGCGCTACTTAAC TTGGGC GAATAGTAGCGCGTGACGCA TTATATAAGAATGAG  60 117
CXD79_RS02305  455631 ..  455641 -  -3.2  -3.59979   GTTGGGCATGGCAAA                 CTCC TGA GGAA                 GGCAAGAATAGGATT  49 39
CXD79_RS02300 NONE
        pruA NONE
CXD79_RS02290  451407 ..  451420 -  -5.9  -3.34947   CAACAAGGCCCACAA               CCGGC ATCA GCCAG                GCACGCATGCGGCGA  52 384
CXD79_RS02280  450544 ..  450578 - -22.3  -3.53012   CTGCGTTGCGCCAAA    GACAAAGGCCGCCCGG CATG CCGGGCGGCCTTTG-C     GGGCAGCGCGCCTAG 100 42
CXD79_RS02275  449469 ..  449479 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS02270  448447 ..  448486 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTTGTCCAGG  64 4
CXD79_RS02265  447222 ..  447235 -  -5.3  -2.83403   CGCGCGGCAGGAAAT               GAAGA AAGG TCTTC                TCGCCATGCCGCCGG  46 206
CXD79_RS02240  440617 ..  440647 - -12.5  -3.29144   CCACGTGCCGTACAA       GGGTACGTCGGCC GCGCT GGCCGACGTGGCC       GGGGGCGTCGTGCAA  70 423
CXD79_RS02215  436043 ..  436053 -  -6.8  -3.51825   GGACTCGAACGAGAA                 TGCG TTC CGCA                 TGGCGGCGTCGATGG  58 378
CXD79_RS02205  433141 ..  433153 -  -6.2  -3.60792   CCTCGAATGGTGAAA                CGCC GGACA GGCG                GGATCTGTGGAAAGT  56 89
CXD79_RS02200  432732 ..  432752 -  -2.5  -3.13906   GCTAACGGAAAACCA           CCCGCCGA CGCACC CCGG-GGG            AGACCCGCCCTTGAC  42 46
CXD79_RS02195  432163 ..  432188 - -18.3  -5.42862   ACAGGCCGAAAAAAA         GCCCCG-CGGCC TGC GGCCGGCGGGGC         GTGTACGGCGCCGGG 100 51
CXD79_RS02190  431313 ..  431341 - -10.3  -3.55444   TCTGGATGGGGGAAA       GCGGCCGGC-CGG GCTTG CCGTGCCGGC-GC       ATTGGTGTCACTCTA  67 89
CXD79_RS02175  427079 ..  427096 -  -3.3  -3.08464   CTACCACTGAGCTAA             CCACCCC GAAA GAGGCGA              AATTCTAGCACGAAA  44 73
CXD79_RS02170  426967 ..  427001 - -19.5  -3.54489   GGAAGCGGAAATGAA    GAAGGGCCGGT-GCTT TTGC AAGCGACCGGCCCTTC     TGGGATGCTGGTGGG 100 34
CXD79_RS02165  426453 ..  426479 - -11.5  -2.78384   CGTTGTTCGACGATA         GCCCAGGCCTG GCGCA CAGGCCCGGGG         ATGCGCACAGACAGC  62 101
CXD79_RS02160  425003 ..  425048 -  -7.4  -3.86822   GAAGCCTTCGAGAAA CTGGGCGCGCCGCC--CCTGCC CGAG GGCAGGTAGGCGGCTGGCGCCG GGCTAGAAGAAGCTC  66 28
CXD79_RS02135 NONE
CXD79_RS02130 NONE
CXD79_RS02120 NONE
CXD79_RS02115  415916 ..  415953 - -14.7  -3.15699   ACGCATCTATGAAGA   TGCCGTGGCCGACTTCG TACG CGACGCCGGCCGCGGCT    ATGCCGGCCGCCAGG  77 87
CXD79_RS02090  412344 ..  412371 -  -3.9  -2.78996   CATCCTGATCGAAAT        GGGCAGGCCCG TCTGCG CGCGCCGTCCC         GCGAACCGCCGCTGC  41 41
CXD79_RS02085  411265 ..  411303 -   -13  -3.52093   ATATTGGAACCATAA   TCCGCGGCACCCGGCCCA TAT TGCATCCGGCGCCGCGGA   TTGCGGGCGGGCCAT  77 53
CXD79_RS02080 NONE
CXD79_RS02075 NONE
CXD79_RS02070  407558 ..  407568 -  -5.4  -2.94924   CCTGGATGGAGAAAG                 CTCT ACC AGAG                 GCTCATTCCTTGTAC  47 28
CXD79_RS02065 NONE
CXD79_RS02060  404869 ..  404897 - -11.7  -3.81755   ACGCGTGAAACAGAA        GCAGGGTGTTCAC GAT GTGAACACCCAGG        GACGGGCGCCGGCTT  79 59
CXD79_RS02055 NONE
CXD79_RS02050 NONE
CXD79_RS02045  401583 ..  401599 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  60 494
CXD79_RS02030  398646 ..  398670 -  -9.2  -3.64822   ACCGGTGTAGCCAAA         GCGGGCCAGCG TCTG CGC-GGCCAGC          CGCGCGCGCGGGTCG  68 347
CXD79_RS02020 NONE
CXD79_RS02015 NONE
CXD79_RS02010  394114 ..  394170 -  -6.6  -3.14051   TTATTTCCAGGAACA CCCG--CATCCCACCGAAGGCACGAT ACGCACG ACCGCGCCGCCGGTCGAATGGTCGGG CACGCCCGGCGGGTA  50 237
CXD79_RS01990  390722 ..  390732 -  -3.2  -2.78816   TCATCGGCCATGACA                 CATC GCT GACG                 GGGTTTGGCGGCGGG  40 151
CXD79_RS01975 NONE
CXD79_RS01970 NONE
CXD79_RS01965 NONE
CXD79_RS01960  386500 ..  386512 -  -3.3   -3.6968   CGAGAACCCCAAGAA                GCTGA AGT TCCGC                GAACTGGAAGCCGCC  55 436
        argB NONE
CXD79_RS01945 NONE
        slmA NONE
CXD79_RS01935 NONE
CXD79_RS01930 NONE
        gatC NONE
        gatA NONE
        gatB  371107 ..  371125 - -10.2  -2.62515   AATCGGTCGAGATCA             TCCGCGCC GCC GGCGCCGA             GCCCGCCGCGGTGCT  55 359
         xth  369446 ..  369457 -  -7.2  -4.25104   TTCGTCGGACGAAAA                GCCG GAAT CGGC                 CGCAAAACCAGTGCT  72 313
CXD79_RS01875  367662 ..  367691 -   -18  -3.93262   CCCAACAAATGGAAA       TGCCGCTGACCA TCGTGC TGGTCAGCGGCA        TGATCACCGGGTGCG 100 313
CXD79_RS01860  365003 ..  365046 - -11.6  -3.15544   GGTCAGGCGCATCAA GACCGGCG-CCGGCGCGCA TGCGTTC CGCGCGCAGGGCGACGGCC GCCATCTGTTCGTCA  64 284
CXD79_RS01820 NONE
CXD79_RS01815  355923 ..  355933 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CXD79_RS01810  354702 ..  354746 -    -4  -2.78463   AGTGGCGCGAGCAGA CGCTGTCCGAAGCGGGCGAC CTGGT GCTGGCCGCGCCGGATACCG GCCTGGACGCCAAAG  40 198
CXD79_RS01785  352408 ..  352442 -    -4   -4.9792   CATTTTAGATAAAAA     CCGCGCGCATGCAACC GGT GCCTGCCGGCGCGCCA     GCGCCGACGGCCCGC  79 115
CXD79_RS01780 NONE
CXD79_RS01775  350788 ..  350801 -  -2.3  -2.64616   TTCCCATCGAGAGCA               GGCAC GAGC GTGCT                TGTGCTGTCGATGAC  38 120
CXD79_RS01770 NONE
CXD79_RS01765 NONE
CXD79_RS01760  346116 ..  346168 - -16.2  -3.05844   TCGGCCAGCGGAATA TGCACCGCGCCGCTGGCGGCGG CGAGAATGC CCACCGCCAGCAGGGCAGCGCC CAGCGCCAGCAGCAG  79 60
CXD79_RS01755 NONE
CXD79_RS01750  344398 ..  344423 - -11.9  -3.57144   TGCGCCACCTCGAAA         CCGGCGC-CTGA GGT TCAGCGCGCCAG         CACCAGCAGGCGGCC  72 14
CXD79_RS01740 NONE
        alkB  342382 ..  342398 -  -9.3  -2.52464   TTGCGGCCGAATTCA              GGCGCCG GCG CGGCGCA              GCGTGAAGTTGATGC  54 6
CXD79_RS01730  341767 ..  341777 -  -8.2  -3.53012   TGCCGGCGTTGCAAA                 CGGC TCA GCCG                 GCCTCGCGCAACAGC  62 19
CXD79_RS01725  340196 ..  340213 - -12.7  -3.06915   AGGGACGCTACGCAA             GCCGGCT GGTC AGCCGGC              CCGAGCATCGCGACG  66 346
CXD79_RS01700 NONE
CXD79_RS01695  336061 ..  336075 -  -8.5  -2.56596   GTCGGGAGCAATCTA               CGCGG GTCGG CCGCG               CGCTGTCTGTTTACT  52 64
CXD79_RS01690 NONE
CXD79_RS01685 NONE
CXD79_RS01680 NONE
CXD79_RS01675 NONE
CXD79_RS01670  331132 ..  331166 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS01660 NONE
        lptG NONE
CXD79_RS01650  326932 ..  326944 -  -4.7  -3.01712   CGTTCGTGGCCAAGA                GCGAG ATC CGCGC                CTGGCCGGTCATCGG  46 510
CXD79_RS01615 NONE
CXD79_RS01610 NONE
CXD79_RS01605  320169 ..  320207 - -10.2  -5.80951   ATCCAAAACAAAAAA   GTGAAGCCCATCGGATCG TAA CAATCCGATGGGCCGGGC   CCTGCCCGTCGCGGC 100 45
CXD79_RS01600  317859 ..  317871 -  -2.7  -2.80074   GTTTTTACAAGAGGA                TCCAT GAC ATGAA                AATTCTGCAACCGCC  39 516
CXD79_RS01535 NONE
CXD79_RS01530  304027 ..  304043 -  -9.3   -2.7185   ATCATGGTGGAATTA              TGCGCCG GGC CGGCGCC              GGCGTGGCCGGCCTG  55 41
CXD79_RS01525  302818 ..  302852 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD79_RS01515  301663 ..  301678 - -11.8   -5.4505   TTGGCCAACAAAAAA              GCCGCC CGGA GGCGGC               TGGAAGGTCGGCTTC 100 42
CXD79_RS01510 NONE
CXD79_RS01505  299716 ..  299739 -  -3.1  -3.51934   CCTGGCTGAGAAACA          TCG-AGCCGA ACTTG CCGGCCCCGA          TCAACGCCACCCGCA  49 219
CXD79_RS01490 NONE
CXD79_RS01475  292130 ..  292160 -  -8.8  -2.66316   GCGGCGAGCAGATCA       CCGCCGTGGCGCTG GAC CTGGGCTACGGCAG       CCCGGGCGCCTTCAC  51 151
CXD79_RS01465 NONE
CXD79_RS01460 NONE
CXD79_RS01455 NONE
CXD79_RS01450  286978 ..  286988 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS01445  285623 ..  285651 -    -6  -3.08679   CCGCGTGATGGAAGA       CATCGTGCGCACGG GCG CCGTGCGG-CG-TG       GCTGGTTCGGCATCG  48 348
CXD79_RS01435  283896 ..  283922 -  -7.9  -3.23853   CCGCCGCAAGGAAGA        GGCCGCGCCGGA AGCG CCCGCCGC-GCC         GCCGGAAGATGTCAC  53 114
        petA NONE
CXD79_RS01420 NONE
CXD79_RS01415  280297 ..  280328 - -18.8  -3.94846   GTATGAAAAGCGAAA      GGCCAGCGCC-GCCA AAT TAGCAGGCGCTGGCC      CCGATTGCCAGGCGG 100 123
CXD79_RS01410 NONE
CXD79_RS01405  279125 ..  279149 - -17.2  -3.16191   CTACACCGGCATGAA          CGCAAGCGGC GCATG GCCGCTTGCG          AGGGACTGCATTGTA  84 73
CXD79_RS01400  279005 ..  279025 - -13.3  -5.07011   TACATAAACGAAAAA            GCCGTCTCC AGA GGAAACGGC            CTAGATCGTTGATTT 100 44
CXD79_RS01385 NONE
CXD79_RS01380  276755 ..  276794 -  -8.6  -3.02144   TCAGCGCCGCCAACA  CCATGCGCCTGG-ACAACA TGG TGCTGTACCAGACGCCCAG  CCTGGATGGTTTCAA  55 372
CXD79_RS01310 NONE
CXD79_RS01305  262545 ..  262560 -    -6  -4.07618   GCCGCAACAAGGAAA              CCGAGC TCGA GCGCGG               CACGGCGCTGGAAGC  66 190
CXD79_RS01295  259921 ..  259936 - -11.8  -3.57144   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC  72 46
CXD79_RS01285  257764 ..  257786 - -12.7  -3.24747   GGGCGACATGACCAA          CGCGCGCCGC TAGA GCGGCGC-CG           GGCGCGTCAGTTGGG  71 32
CXD79_RS01275 NONE
CXD79_RS01270  254242 ..  254279 -    -9  -3.35679   CGCGGGCAGTGAGAA   GCGGGCGCCCGTCCCC GTTGGG GAGGAGCGACACCCGC    GGCAAGGGTGCCTGT  63 127
        mutL NONE
        miaA  250652 ..  250681 - -23.7  -2.78816   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 30
CXD79_RS01245 NONE
CXD79_RS01240 NONE
        pcnB NONE
CXD79_RS01230  245861 ..  245874 -  -4.5  -3.38326   CAGAAGCTGAACGAA               GCGTCG GCG CG-CGC               GCTGAACACGCCGGC  49 189
CXD79_RS01210  240288 ..  240319 - -15.9  -3.76413   TTGCAAAATGGGAAA      GGCATCCGGTGCG TGCGAG CGCACCGGACACC       ATTGGACGGCCTGCG  90 42
CXD79_RS01205  239307 ..  239317 -  -2.4  -3.29144   CGACCTGGCGCACAA                 GGAC CTG GGCC                 TGGCGCTCGAACTGG  44 257
CXD79_RS01185  236325 ..  236335 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS01180  235204 ..  235218 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
        thiC  229271 ..  229285 -  -8.5  -3.02263   ACACCTCGGTCAAGA               CCGCC TACAC GGCGG               CCTGACCCGCATGGC  55 72
CXD79_RS01135 NONE
CXD79_RS01130  224034 ..  224083 -  -9.8  -2.82015   GCCATAGGCAGCATA TCGGCGACGGCGGCGCC--GCGGA TTTT CCCGCTTGGCGCGGCCGACGCGGC GCCGGTAGGCATCGC  56 396
CXD79_RS01120  222472 ..  222484 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTACCCGGACTGCCG  50 368
CXD79_RS01110  218815 ..  218843 -  -2.3  -4.92756   ATGATCAAAAACAAA        TCATCCTGGGACG CAG CGCCTCAAAATGT        TGGGAGGCTTCCGGG  76 237
CXD79_RS01105  215551 ..  215580 - -23.7  -2.78816   TCATGGCGCATGACA       GAGCGCCTGTCCC CGTG GGGACAGGCGCTC        TTGCCGCTGGTGTCG 100 111
CXD79_RS01100 NONE
CXD79_RS01095  212803 ..  212816 -  -3.7  -3.33696   GGGCTCCGTAAGGAA               GGCGC GGCG GCGTC                AGTGGGTCAGGTAAC  47 24
CXD79_RS01090  211989 ..  212022 - -12.4  -2.82519   CGAGCACATCAACCA    GGCGCTGCGGCGCCGC TGAG GCGGCGC-GC-GCGCG     ATGCGCGAGCAGGCG  66 61
CXD79_RS01080 NONE
CXD79_RS01075  209664 ..  209684 - -19.7  -4.11216   CTTCGATCGGTAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGGCGTTCAG 100 37
        catC NONE
CXD79_RS01065 NONE
        pcaD NONE
CXD79_RS01055  206874 ..  206886 -  -4.7  -3.73068   GGCCGAATGCAACAA                GTCGG CAA CCGGC                AAGACCGGCGACGAG  58 310
CXD79_RS01025  201802 ..  201812 -  -8.2  -3.28712   GGCGCGGGTGGACAA                 CGCC TAT GGCG                 ACCGCAACCTGGTGT  59 217
CXD79_RS00975 NONE
CXD79_RS00970 NONE
CXD79_RS00965  188274 ..  188286 -  -4.8  -3.41051   GCAGTTCGACGAGAA                GTCG TTCGT CGAC                TTCAAGGGCGATGTC  52 372
CXD79_RS00940  180909 ..  180938 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGT GCCACGGCGGCGCT       GCAGGGGCCGGCGGG  91 50
CXD79_RS00935  178600 ..  178626 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GTG GCGGGCCGGCGG         CGGCGCGCTCAGCGC 100 34
         bfr  173560 ..  173581 - -17.3  -3.75629   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG  91 63
CXD79_RS00875 NONE
CXD79_RS00870  166928 ..  166983 -  -6.7  -3.15544   CGCTATCCGCACGAA TTCTCCGGCGGCCAGCGCCAGCGC-AT CTGC ATCGCGCGCGCGCTGGCCACCCG-GCC GCGCTTCCTGATCTG  52 330
CXD79_RS00860  164535 ..  164592 -  -2.7  -4.11484   CTGAACTCTTCAAAA CCATGGAAGCGGTGCGCTGGAATAT-GG CGT CCGATATCCCATGGGACGACTTCGACGG CAGCAAGCTGTCGGA  59 327
        phoB NONE
        phoR NONE
CXD79_RS00820 NONE
CXD79_RS00815  155623 ..  155650 -  -2.7  -2.66316   CGGCCGACGATAGCA       GGGCG--GGACTG ACCT CAGTCTGTCGCCC        GGATTACGCGTTTGT  39 12
CXD79_RS00810  154987 ..  154999 -  -7.7  -3.78934   TTGCCTGTACAACAA                GGGTT GAA AACCC                CCCCCCCATTGTGGA  66 96
CXD79_RS00805  153494 ..  153509 -  -3.2  -3.73775   TCGAGCTCGACGAAA              TCGACG CCAT CGCCAA               CCTGGTGCGCCACGG  55 282
CXD79_RS00795 NONE
        pxpB NONE
CXD79_RS00785  150084 ..  150106 -    -9  -3.01712   TCCGGTCGGCGAAGA           CTTCCTGCGC CGC GCGCAGGCCG           ATGGCGCGGGCAGCG  57 495
CXD79_RS00770  147840 ..  147852 -  -5.5  -3.01712   GCGGCGCCGCCAATA                CCGCA TCC TGCGA                TGATGACTCGCATAG  47 110
CXD79_RS00760 NONE
CXD79_RS00755 NONE
CXD79_RS00750  143526 ..  143567 -  -9.2  -3.72027   AGCGCCTACGAACAA TGGGCGGGCGACGC-CGGC GACGA GCCGGGCGACGACCGCCTG CGCGTCGCGTAGGCC  68 125
        ilvA  136162 ..  136172 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 380
CXD79_RS00720 NONE
CXD79_RS00710  132734 ..  132774 -  -8.8  -3.05715   AATGCCGTTACCGAA CGCCAAGTCCGCGCCTGCG TGGA CGCGGGCGCGG-CTACGCT  GGGCGATCTCCAGTT  55 264
CXD79_RS00695  130456 ..  130475 - -16.4  -3.85165   CAGCGCAAATGTAAA            CGGCGCGC CAGG GCGCGCCG             TCAGGCCGGTCCGGG  91 55
        leuA  128020 ..  128048 - -16.7   -3.1372   GACCGCCGAGCAATA        CCTGGCCCACCTG GCG CAGGCGGGGCAGG        CGCGCGCGAAAGTGG  80 355
CXD79_RS00675 NONE
CXD79_RS00670  124695 ..  124739 - -17.8  -3.19653   CCAGAAGGCCAGGAA CAGCGCCGCGGCCGGC-GCAG CGAA CAACAGCCATCCGCGGCGCTG CATATCAATTCACCT  86 30
CXD79_RS00660 NONE
CXD79_RS00655  122127 ..  122137 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD79_RS00650  121049 ..  121077 -  -2.9  -3.30701   TTCCAGGAAATTCAA        TGGGCCGCCAGCA CCA CGCTGACGGACTG        GCCGGTCTGATAGGT  46 71
CXD79_RS00645  120173 ..  120194 - -10.8  -2.84325   GCGGTGCAAACATGA           CGCCGCCA TGTCAG CGGCGGCG            CTTGTTTCACTCGTC  61 32
CXD79_RS00640  119063 ..  119077 - -12.8  -3.48276   CGGTGGTTCACAGAA               CCGCCG CGT CGGCGG               CGAAGAAATGCTGTC  73 3
CXD79_RS00635 NONE
CXD79_RS00630 NONE
CXD79_RS00625  115862 ..  115880 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 182
CXD79_RS00605 NONE
CXD79_RS00600  111212 ..  111226 -    -7  -2.90714   TTAAAGCGTTACAGA               CTGCGG ATG CCGCGG               GGAAGTTCCATGGCG  50 43
CXD79_RS00595  110499 ..  110518 - -11.4  -4.08144   CCCATCAACGACAAA            GCCTCCGC ATGG ACGGAGGC             TTTGTGGCGTCGGGG  82 60
CXD79_RS00580 NONE
        rfbB NONE
        rfbD NONE
        rfbC  104821 ..  104856 - -16.1  -3.14878   GGCGTCAACTGAAGA    CGCGCGGGCCGCTAC GCATAG GTATCGGCCCGCGCC     AGCGCCACGCCCTGG  81 1
CXD79_RS00510 NONE
CXD79_RS00505 NONE
CXD79_RS00500   94077 ..   94110 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATT GCGGCGGGGGCGGCG      CTGCGTGCGCCCGAC  52 204
CXD79_RS00485 NONE
CXD79_RS00480 NONE
CXD79_RS00475 NONE
CXD79_RS00470 NONE
CXD79_RS00465   86735 ..   86750 -  -7.5  -2.62515   AATTCTCGCAGATTA              GCGCG AGGCTG CGCGC               CGTGGCGTGACAGAT  50 7
CXD79_RS00460 NONE
CXD79_RS00455   84787 ..   84810 -  -9.4  -3.53012   GCGTTGGTGCGCAAA          GGCGCGACAC TGCC GGGGCGCGCC           ATTGAGTGCGAGTCA  64 107
CXD79_RS00450 NONE
CXD79_RS00445   82754 ..   82775 -  -7.9  -4.62302   GAAGAGCCGGAAAAA           CCCAGTGCG ACGG CGCACAAGG            CCAGTGGCGTGGATA  81 73
CXD79_RS00435   79481 ..   79495 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 131
CXD79_RS00425   77326 ..   77352 -  -8.7  -4.07568   CTCGCTGCTGGAAAA         GCTGCCCGC GCAGCTCCA GCAGGCAGC         CGGCCAGCTGCAGGG  72 308
CXD79_RS00415 NONE
CXD79_RS00410 NONE
        ampD NONE
CXD79_RS00400   73382 ..   73413 - -10.1  -3.25823   GGTGCTGGAGATCAA      CCCGGACCACGCGC TGGTC GCGCG-GATCCGCG      ATGCCAGCGATGCGG  63 318
CXD79_RS00390   71199 ..   71221 - -12.6  -2.82742   ACGCTTTTATAACGA           CCGGCGCCCG CAT CAGGCGCTGG           GCATGAAGACTCCGG  66 195
CXD79_RS00365   66991 ..   67001 -  -8.2  -2.54655   AAAAGGCCCAACCCA                 GGGG TAC CCCC                 AAATTGATGATCCAT  52 507
CXD79_RS00355 NONE
CXD79_RS00350   64500 ..   64513 -  -5.3   -3.5323   AACTTCAAACAAAAC               TATCG CACT CGATA                TCAAGCGCATCGATC  54 1
CXD79_RS00345 NONE
CXD79_RS00340   63284 ..   63310 -  -4.3  -2.78384   GCGCGGCCCATGATA        TCCGTGCCC-CC ACCG GGTGGGAACGGT         ACGACCAGTGTAATA  43 189
CXD79_RS00335   62061 ..   62083 -  -8.4  -4.09685   GGTGATGGCGTAAAA           GGGCATAGCG ATC CGCTATATCC           AGCCTGGCAAGCCAA  72 385
CXD79_RS00325   60987 ..   60998 -    -3  -5.30348   ACTTAACAATAAAAA                TTCA AATA TGAA                 TGTTTAATTTAGTTA  89 105
CXD79_RS00320 NONE
CXD79_RS00315   58900 ..   58930 -  -5.3  -3.73068   GGTCGAAGCCAACAA       CCCCACCACCAGC ATCCA GCTGGTCGTGGCC       GGCATAGGGCTGGGT  57 344
CXD79_RS00305 NONE
CXD79_RS00300 NONE
CXD79_RS00295 NONE
CXD79_RS00290 NONE
CXD79_RS00285 NONE
CXD79_RS00280   53379 ..   53401 -  -4.8  -3.76482   CGACACCAGCAAGAA           CCTGGTCG AGGAAGG CGACAAGG           GCAAGCGCTACGCGC  58 247
CXD79_RS00235   45237 ..   45272 -  -2.4  -4.16842   TTCATGCTCAAGAAA    CGCGTGCGGATCCTG TGGCAGG CCGGCTGCGC-CGCG    CTGCTGCTGGCCGCC  61 474
CXD79_RS00215   43266 ..   43306 - -20.6  -3.53012   GTCTTGGCCGTCAAA CCG-CAGTGTGCCTGTCCC AGCG GGGACAGGCACACTGGCCG  CAGTTGGGACAGGCA 100 66
CXD79_RS00175   35576 ..   35594 - -13.1  -2.84298   GACAGTTCACAACTA             GCGCGGC GCCTG GCCGCGC             GGCAGCCAGTGCCAG  69 4
CXD79_RS00155   30988 ..   31001 -  -3.7  -2.70932   TCTCGCCGCGAATCA               TCGCC TGGC GGCGG                ATCCGGCCAGCATGG  41 94
CXD79_RS00150 NONE
CXD79_RS00145 NONE
CXD79_RS00140 NONE
CXD79_RS00135   28287 ..   28297 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD79_RS00130   26859 ..   26875 -  -5.8  -3.53012   TGCGCTGCCTGCAAA             GC-GGCG CGGA CGCCTGC              GTGCCCCTGCCGGCC  55 433
CXD79_RS00115   24044 ..   24068 -  -7.7  -2.97021   TCGGCAAAGATGATA          TCCAGGCCCAC TGC GCGGGCCTCGC          CCAGCTTGTCCAGCA  53 310
CXD79_RS00100   20076 ..   20099 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 53
