CXD81_RS00015    3394 ..    3417 +  -6.8  -2.96979   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCTGTTCC  51 16
CXD81_RS00020 NONE
CXD81_RS00025    5210 ..    5241 +  -3.6  -3.14344   ACGCGGCCAGCGGCG      CTTACCG-CGCCG GCTCGTA CGGCGTCGGGCAG      TTGCTGGCGGCCGTG  45 103
CXD81_RS00035    6413 ..    6434 +  -7.3  -4.09685   CTCAGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  67 116
CXD81_RS00040 NONE
CXD81_RS00045    6668 ..    6680 +  -2.7  -3.65046   GTCATGGGCACCATC                GAATT CTA AGTTC                TTCTTCAAGTCAGAA  53 28
         tuf    7926 ..    7960 + -18.1  -3.72893   AAGGCGCGGTTTTCC    CATGGATAGAGGGGCC GGAT GGCC-CTCTATCCATG     TTTGCTGGAAAAGTA  93 39
CXD81_RS00055 NONE
        secE NONE
        nusG    9056 ..    9074 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CXD81_RS00075   10300 ..   10321 + -14.5  -2.62184   ATAGAACTTTGGGCC           GCATCCGGA CTTG TCCGGATGC            TGCTGTCAAAGACCG  71 55
CXD81_RS00080   11043 ..   11056 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG CGTC CGGAA                TTCGCTGAACGACAA  41 31
CXD81_RS00085   11517 ..   11549 + -17.7  -4.35524   AGACCTCGCGTCGAC      GCCCGGGGACAGC GCTCTTA GCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 40
        rpoB NONE
        rpoC   20076 ..   20099 + -16.8   -4.4078   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 83
CXD81_RS00105   22150 ..   22174 +  -3.4  -3.02144   AGCCCCAGGCCAGCG          CCGCCTACTT CGTTC GAGCCGGCGG          TGTTGACGCGCGTAA  42 228
CXD81_RS00125   27452 ..   27486 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS00160 NONE
CXD81_RS00165   34454 ..   34511 + -16.7  -3.53224   ACCTGATGGCGCTGT GCGAACCCGCGCCATGACGCCGGGCCGG CGC CCGGCACGGCCCCGCGGCCCGGGC-CGC TTTGCGGGCCGACTA  86 9
CXD81_RS00170 NONE
        glyQ NONE
CXD81_RS00185 NONE
CXD81_RS00190   40595 ..   40613 +  -2.2  -2.53015   CAACTGCTGCAGGAG             GCCTGATC CAT GGCCTGGC             TGCGTTCGGCGCTGT  37 20
CXD81_RS00195 NONE
CXD81_RS00200   42211 ..   42236 +  -5.9  -3.74693   CCCTGCCGCAGTTCT         GAGCCCGCGCC GGCT GGCGCGGCCGA          TTTGCTACGATGACG  59 24
        gloA NONE
CXD81_RS00210   43600 ..   43610 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  57 407
CXD81_RS00220   45098 ..   45110 +  -6.2  -2.71144   GGCCACGCCCGGGGC                CGCC GGCCA GGCG                TAATTGGCCAGGCTG  47 509
CXD81_RS00230   46039 ..   46051 +  -6.2  -3.96531   AGTCTCGATTCGTGG                CGGC ATCAA GCCG                TTTATCCATATCTGA  64 315
CXD81_RS00240   47473 ..   47511 + -10.9  -3.14132   GGGCCAGGTTGATCT  CCAGCGGCGCGGCGGC GCGGGAAG GCCGCCGCGAC-CGGG   TTGGTGCCCAGCAGC  64 520
CXD81_RS00250 NONE
        metW   50078 ..   50088 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 97
CXD81_RS00265   51098 ..   51113 +  -3.2  -2.70932   TCACAGCTAGCAGGA              CCGG CGCGCCTA CCGG               TCGTTCCACGGGAGA  40 31
CXD81_RS00270   52437 ..   52452 +  -7.5  -3.14527   CGCTACCCGCGCAAG              CCGCC CGCAGT GGCGG               TATTGATAACAATTC  54 71
CXD81_RS00375   70070 ..   70080 +  -4.6  -3.07013   CAAGCATGGACGCAT                 GTCG CAA CGGC                 TGTATTGACCCAGTG  45 59
CXD81_RS00380   70668 ..   70678 +  -4.6  -3.10464   ATTCAACAAGAACAC                 CGTG CAG CGCG                 TGTTCCAGTTGATGG  47 249
        htpG   73562 ..   73594 +  -6.8  -4.08767   ATGCGCTCGATCAAG      GGGTGGCTGTCCCC GCGCG GGGGGCTGACACCG      TTTTGGCAGGCTGGC  67 43
CXD81_RS00420   77804 ..   77838 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS00430   79792 ..   79808 +  -2.1  -4.07568   AGTCTTCCCCGATCA              GCAGTTC TTC GTACAGC              TTTTCCCCGGGCCGC  58 213
        waaC   92972 ..   92998 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ACA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CXD81_RS00495   94274 ..   94284 +  -8.2  -3.14132   ATTGGCTGGGATAGC                 CCGC CGT GCGG                 TTCGTCAGGGCCGCA  56 27
CXD81_RS00515 NONE
CXD81_RS00520   98558 ..   98572 +  -4.2  -5.01732   CATGCCGGCCACCAT               CCCG CTGCGGC CGGG               TTTTTTCCAGCGCTT  81 404
CXD81_RS00530 NONE
CXD81_RS00535  100410 ..  100423 +  -2.4  -3.51934   TGACCCGGCCCGCGT               TGCA TCACGT TGCA                TGTTTGTAAGCGCAA  48 38
CXD81_RS00540 NONE
CXD81_RS00545  102743 ..  102768 + -13.2  -3.61178   CTGTAGCGGCCGGCA         GGCGGGCGGC CCTGGC GCCGCCCGCG          TTTCGCGTCCCTCGC  77 35
CXD81_RS00550 NONE
        lipB  103778 ..  103800 + -12.7  -3.31792   CTTTTTTGTCTCGAA           CCGGAGCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  71 49
        lipA  104853 ..  104873 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
        metC  110499 ..  110518 + -10.7  -3.89346   CCCATCAACGACAAA            GCCTCCG CATGGA CGGAGGC             TTTGTGGCGTCGGGG  77 53
CXD81_RS00610 NONE
CXD81_RS00615  114737 ..  114765 +    -6  -3.78419   GTCCGCAGGGGGACT        GGCACCGG CCAAATCCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 100
CXD81_RS00620  116017 ..  116032 +  -5.4  -2.72991   CCATGCTCCATCCGG              GGACAGG CAC CC-GTCC              TCCTTCAGCGTATCC  45 81
CXD81_RS00685  128728 ..  128770 +  -5.5   -3.1247   ACGGATCGCCGTCGA TACGGTGGCGGACCAGCTGC CAGG GCTGCTGCTGCGCCAG-GTA TTCGCTGTCGAAGAT  47 466
        rpoN  132587 ..  132602 +  -6.2  -4.30833   CCACGCCGCGGGTCG              TTAGGA CGCC TCCTAA               TTTGTTCCTGATTTC  73 22
CXD81_RS00705  132999 ..  133030 + -16.6  -3.96148   GAGCGACGCGGCGCC      TTGCGCCAGCCGGC TCAT GCTGCCTGGCGCAA       TTTATCGTCCCCACA  93 39
CXD81_RS00740  142789 ..  142802 +  -5.2  -3.77188   CGGGACGGATCCAGG               GCGC CGCATT GCGC                TATTTATGTTTCAAT  60 70
CXD81_RS00745  143562 ..  143582 +  -8.9  -3.96148   GAGCCGGGCGACGAC            CGCCTGCGC GTC GCGTAGGCC            TTTCTCCTCACGACA  70 8
CXD81_RS00775  150294 ..  150327 +  -7.4   -3.1505   CGGCCACGCCGGCCA     GCGCGCCGACCTGGT AGACC ACCAGGTCGTAG-GC     TTCCTGCGGGGTGAT  54 510
CXD81_RS00800  154062 ..  154083 +  -6.5  -4.28361   GAAGCGCACCAGTTT           C-TCGGCCAC TTC GCGGCCGATG           TTTTCCTGGGATTCC  72 373
        ubiE  160819 ..  160834 + -11.8  -3.53811   AAGGTTTGCCGCGCA              GGCCCC AACC GGGGCC               TTTCCAGCCGCTCCC  72 121
CXD81_RS00840  161989 ..  162016 + -19.2  -3.30007   CGGCCGGGCTGCACC        GTGAACCGGCCC GCCA GGGCCGGTTCGC         TTATGGGCCGGTCTT 100 103
CXD81_RS00845 NONE
        ubiB  164639 ..  164671 +  -4.8  -3.13403   TCAAGATGAACGCGA     TCACCGAGTGGGCGGC CTT GCCGGCCAC-CGA-GA     TGTTCCTGCGCGACA  47 330
CXD81_RS00880 NONE
CXD81_RS00885 NONE
CXD81_RS00890 NONE
CXD81_RS00895  173559 ..  173580 + -17.3   -4.7373   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG 100 48
CXD81_RS00905 NONE
CXD81_RS00910  175445 ..  175462 +  -6.3  -3.05844   ACAGGTCGTCGGCGA             TCAG-CGC CTC GCGGCTGA             TCTTGCGCTCGGGCG  49 219
CXD81_RS00920  176973 ..  176983 +  -6.8  -2.62735   TGGGCCGCCGGTTCC                 CAGG AGT CCTG                 TCATGTCCGCAATCT  47 104
CXD81_RS00925  177785 ..  177817 +  -2.6  -3.92324   TGGCGGCGCCGCGTC     CAGCCCC-C-GCGCCG TAG CGCCTTGGCGGGGCTG     TTTACTATTACGCCC  56 9
CXD81_RS00930  178706 ..  178750 +  -8.3  -3.92324   GGGTTCGGCCTTCTC GTCGGCGTGGCTGGCGGCCAG CAC CATGCCCTCGGACACGCCGAA TTTCATCTTGCGCGG  70 135
        apbC  182417 ..  182434 +  -3.3  -3.14125   TGGTGGTCCGGCCCG             CCTGACG CATG CGTCGGA              TATTGCGTGTCTGCC  44 21
CXD81_RS00950 NONE
CXD81_RS00955  188024 ..  188036 +  -7.7  -3.37344   GCGGCGGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  59 49
CXD81_RS00960  188815 ..  188836 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC CTC GTCGGGCTGC           TTCATGTAGCGGGAA  52 216
CXD81_RS00980  190651 ..  190679 +    -8  -5.24129   GTCCTACAATTCCCC        GAGGTCGGCCCG CTCGT CGGGCCGGTTGC        TTTTTTGTCACCAGC  95 76
CXD81_RS00985  193034 ..  193073 + -33.6  -3.65812   GCAGTAAATCCGACG  CGCCGCGCCGCGCCGCCC GAGG GGGCGGCCCGGCGCGGCG   TTGTCTTCGAGGGAG 100 34
CXD81_RS00990  194341 ..  194351 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS00995  195368 ..  195393 +  -4.7  -3.72481   TAGCCTGGCGGGCAC        GGCGCATGCGG GCAGGG CCGC--GCGCC         TATTGTTTTGGTAAA  55 38
CXD81_RS01000 NONE
CXD81_RS01005  197007 ..  197022 +    -6  -3.55444   AACAGGGGCGGATCG              GCGCCC ATCC GGACGC               TTTGCGGCATGGCGC  56 49
        gcvT  198500 ..  198523 +  -7.4  -3.97368   GGCTTCCGCGCGGCC          GTTGGC-CGCC GGA GGCGCGCAAAC          TTTCTCCATTCCCAC  68 47
        gcvH  198957 ..  198977 +  -8.1  -3.90744   CAACGGGCCGGCCCG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAAAAC  68 48
        gcvP  201877 ..  201922 +    -9  -3.75665   GTGCGCGCTCATGGC GCATGACGAGGTGCCTGTCCCC CCAT GGGGACTGGCACCT-G-CAAGA TTTCATGGCGTCTGC  68 44
CXD81_RS01030 NONE
CXD81_RS01035  205407 ..  205443 +  -6.6  -4.26019   CTTCGGCCTGTGCCT   GTGCGCCGACCTGGTG CTGGCCA CGCCAG--CGGCGCGC   TTTTGCCTGTCGTTC  70 411
CXD81_RS01045  206614 ..  206649 +  -3.2  -3.56568   GTGGCCACTTGTGCC    GCAATGCGC-CAGCAGG GAA CTTGCTACGCGCATCGG    TTTGGCAGATCATTG  49 54
CXD81_RS01050  207521 ..  207532 +  -7.2  -3.60098   GGGCTTGCCGTTCAT                GCCG ACCA CGGC                 TTTGGCGTAGCCGGT  60 481
CXD81_RS01085  212333 ..  212347 +  -4.2  -3.72893   CAGGGTGCGCGTCAG               GCCG ATCAGCC CGGC               TTTGGTCGCCGAATA  55 352
        queC  222888 ..  222901 +  -4.5  -2.82623   GCATCAGGACGGTGT               CGCGCC ATT GGC-CG               TGCTTGTAGCCCACC  44 126
CXD81_RS01125  224419 ..  224453 +  -8.4  -2.84298   CCTCCAGGCATCGCC     GCGCGACTGAGCCTGG CGC CCGGCCTGCGTTGCGC     TAGTTGTGAACTGTC  54 16
CXD81_RS01140 NONE
CXD81_RS01145  227801 ..  227822 + -18.7  -3.41051   ACGACTTTGCTGTGC           CGGGCGCCC CTTG GGGCGCCCG            TTGTCCTACCCGTAG  93 80
CXD81_RS01150  229387 ..  229409 +    -4  -4.18018   CCACCGCCTTTTCCT           GCATGCCCTG CTG CAGCGCGTCC           TTTTCGCTGACGCCC  63 123
CXD81_RS01160  232168 ..  232187 +  -5.6   -4.7497   GGCCGGCGCAACCGG            GACAGCCT TGCG GGGCTGCC             TTTTTCATGGATGGG  81 64
CXD81_RS01165  233272 ..  233282 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 76
CXD81_RS01170  234262 ..  234307 + -13.5  -3.14132   CAACCTGGACGAATA CAACCTATTGACAGTTCACAG CTAG CTGTGATGTCTCAATAGGTTG TTCATCCAGGCCGGA  72 1
CXD81_RS01175  235489 ..  235523 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS01195  238816 ..  238854 +  -7.3  -3.14229   AGGCGGCGCTCGAAG  GCGCCGACGGCGCCC-TGC AGG GCATGGGCCCGGGCG-CGC  TGTTCATCAACATGT  52 315
CXD81_RS01215  243993 ..  244011 + -11.6  -3.04144   ATCATCCATCCCACG             GCGCCGGC GGC GCCGGCCC             TGTTCGCGCTGGCCG  65 367
CXD81_RS01225  246014 ..  246061 + -10.4  -3.01712   AAGGCAATCTGCAGC CCTGACCAGGGGAGCCGCTGCCC TCA GCGCAGCGGCTCGA-TGGCCTGG TCTTCCAGCGCGGCC  60 21
CXD81_RS01250  250651 ..  250680 + -23.7  -3.18264   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 97
CXD81_RS01265  254284 ..  254313 + -23.7  -2.62616   CGACACCCGCGGCAA       GGGTGCCTGTCCC AGCC GGGACAGGCACCC        TGCTGTACGCCATCG 100 72
        fumC  257779 ..  257791 +  -4.7  -2.52464   GCGCGCCGCTAGAGC                GGCGC CGG GCGCG                TCAGTTGGGCGCGCC  42 29
CXD81_RS01290  259920 ..  259935 + -11.8   -5.4505   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC 100 54
         ggt  263105 ..  263124 +  -5.6  -4.36914   CGCCAGGAAGATCGG            CCCGGCGCC GGT GG-GCAGGG            TTTTATACGGCGCGA  69 414
CXD81_RS01320  266502 ..  266541 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD81_RS01330  267988 ..  268005 + -14.1  -3.84451   GTCGAACCAGGAAAA             CGCCGCC GTCA GGCGGCG              TTTGCGTTTGCGCAA  83 441
CXD81_RS01340 NONE
CXD81_RS01345 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC  275098 ..  275135 +  -2.7  -2.71041   AGGCCGGCTGCACCG   CGCCGCGCCCATGT GACTGGCCTAA GCATCGGCGC-GCG   GTTATAGTTCGCCTT  40 10
CXD81_RS01370  275856 ..  275882 +  -8.7  -2.84812   CCCAATCGGGCAGCA        CGCG-CACCAGG CCTG CCTGATGGCGCG         TGTCATGCTGTCGCT  54 157
CXD81_RS01380  277287 ..  277328 +  -7.9  -4.18488   CGGCCGGACACTGTG GGCAGTGCTTCGCGCGCAGC ATG GCTGCGCCAGGCGCA-TGTC TTTCTTGCCATCCGT  74 167
CXD81_RS01400 NONE
CXD81_RS01405  280219 ..  280231 +  -3.3  -3.34517   TGCATTGTAGTGAAA                CTTCG CGC CGCAG                TCTTTCGGACAGGCT  46 518
        mscL  285488 ..  285500 +  -6.2  -3.63569   CAGGCCCAGCACGCG                CGCC AGCTG GGCG                TTGTTGCCCCATTGC  57 479
CXD81_RS01450  287191 ..  287225 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS01480  293562 ..  293588 + -12.3  -2.58544   CAGCACCGCCAGCTC        GGCCGCGGCCAC GGCG GTG-CCGCGGTC         ATTGTGCGGGTGCAC  62 285
CXD81_RS01490  295205 ..  295248 +  -8.1  -3.33814   CGGCGCGGCGCGAGC CGCCGG-CCTGAGGCGCCGGCG GGG CGTCG-TGCC-CGGATCCGGCG TATTATCTAGCGTTT  56 15
CXD81_RS01495  297303 ..  297329 + -11.5  -2.74488   TGTCCTGATTCACAG        GCCCGCG-CGGC CAGC GCCGGCGCGCGC         TGATTCGCGTCGTTG  62 176
CXD81_RS01505  299844 ..  299863 +  -7.8  -3.35679   TGATGCCCAGCTCCA            GCCCGATC AGGT GATAGGGC             TTGTACATGGCCGAA  59 391
CXD81_RS01530  304388 ..  304419 + -10.1  -3.05384   TCCACCTTGAGCAGC      GGCAGCCGGCCCAC GTCCA GCGGGTC-GCTGCC      TTCGGTGCGCAGCAG  59 344
CXD81_RS01550 NONE
CXD81_RS01555 NONE
CXD81_RS01560 NONE
CXD81_RS01565 NONE
CXD81_RS01570  311396 ..  311423 +  -9.1  -4.07568   TCCCGAAGTCTTCCT        TC-CTGCGCCGG CCTGT CCGGCGCAGCGC        TTTTGGGGACGGCAC  75 56
CXD81_RS01585 NONE
CXD81_RS01590 NONE
CXD81_RS01595 NONE
CXD81_RS01600 NONE
CXD81_RS01605  319627 ..  319645 +  -3.1   -3.4247   ATCTTGGCGTGCGTC            TG-GCGGG CGCG CTCGCTCA             TGTTGTTGACGTTCT  47 336
CXD81_RS01630 NONE
CXD81_RS01635 NONE
        ruvX NONE
CXD81_RS01645 NONE
CXD81_RS01650  327619 ..  327633 +  -2.7  -2.82516   CAGCCGCAGCGTGCA               CACGC CGTTC GCGGG               TATGATGCTGCCCGG  41 64
CXD81_RS01655  328439 ..  328475 + -16.4  -3.06831   TCGCCGGCGAGCTGT    AGCCGGCCCGGGCGGC GCGTG GCCGCCCGCGGCGGCG    TTCAGTCGCCGTTGG  79 24
CXD81_RS01675  332766 ..  332790 +   -15  -3.16492   TCATCCTCCGGTTGC         CGCCGCGCGGG CCGT CCCGC-CGGCG          TGTTGCTGGCTATCC  76 408
CXD81_RS01720 NONE
CXD81_RS01725 NONE
CXD81_RS01730  341908 ..  341930 +    -9  -2.71681   CGCGCAGCAGCCGGT           CGCCGGCGGC ATG GCCGTGGGTG           TCATTGACCGACTTG  52 361
CXD81_RS01755  345621 ..  345631 +  -2.4  -2.82519   CCAGCGTGTCGCACC                 AGCG CGC CGCC                 TGATTGATGTCATGC  39 190
CXD81_RS01800 NONE
CXD81_RS01805 NONE
CXD81_RS01810 NONE
CXD81_RS01815  356136 ..  356170 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS01835  360344 ..  360368 +  -7.8  -4.96388   CTGAAGCGGCGTCGC          GCCCGGGG TGCGGGTTT TCCCGGGC          TTTTATTTAGTGCTT  86 37
CXD81_RS01840 NONE
CXD81_RS01845 NONE
CXD81_RS01850  363198 ..  363214 +  -3.6  -2.62157   CAAGAAGTAGACGCA              CCCTGG AACGG CCATGG              CTTATCGCATTCATC  40 31
CXD81_RS01855  364265 ..  364292 + -15.6  -2.56596   TGCCCGGGGTGCCGG        GGTGCCTGTCCC AGCG GGGACAGGCACA         TGGATTCCTGCGGGG  74 69
CXD81_RS01860  365245 ..  365273 + -10.1  -4.11216   GCAACAAGCGGCGGG        GTTTGCCGGCGCG GCT CGCGGCGGCGCGC        TTTTCGGCATGCCGC  78 94
CXD81_RS01865  366862 ..  366878 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD81_RS01880  369109 ..  369138 +  -4.1  -4.29738   ACATAGTTGACGTAG       TTGCCGGCGCCGT GGCC GTGGCGCACGCAG        TTTTCGTGGATATCG  67 144
CXD81_RS01895  372486 ..  372515 +  -2.7   -4.8622   AGGAGCTCGTCCCCA       CGGGGACTGGCTCC CGA GGGATCAG-CCCAG       TTTTTCCTTCAGCAG  77 118
CXD81_RS01915  377141 ..  377169 +  -4.5  -3.35679   GGCGCGGCCCGCGAA       GCAGCTGCGGGC AGGCAG GCCCG-GGCTGA        TTATCCATGCAACGA  51 79
        mreC NONE
        mreD  378599 ..  378624 +  -3.9  -3.09492   GACGACGTCGAATCT         TCCG-CCGTCTG ATC CGGGCGGGCGCA         TGTTCGAATTCAAGA  45 14
        mrdA NONE
        rodA  382180 ..  382227 +  -4.6  -3.61715   CCCTGCGCATCGATC AGCGCGC-CGTCGGGGGCCGG CTCGCCC CTGGCCGCCAGCACGCGCGCC TTGTTGACCGCGATC  54 496
CXD81_RS01965  388303 ..  388341 + -11.9  -4.42788   TGGTGGCCCAGAACT  TCACCA-GCACGACCTTGC CGC GCA-GGTCCTGCATGGTGA  TTTTCTGGCCTTCGA  88 498
        rsmI NONE
CXD81_RS01995  392075 ..  392109 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS02005 NONE
CXD81_RS02010 NONE
CXD81_RS02015  395367 ..  395398 + -15.9  -4.25104   GGCTGAGCGCCGGCC      CGGGTGCCTGTCC CCGCGC GGACAGGCACCGG       TTTTCCTGCGGGGAC  95 35
        trxB  402142 ..  402152 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS02050  403433 ..  403454 +  -8.7  -3.18582   GCGCCACCAGGCCCA           CCGCCTGCGT ATC GCGCAG-CGG           TTGGTAGCTGAGCTG  56 269
CXD81_RS02110 NONE
CXD81_RS02115  416057 ..  416071 +  -2.7  -2.62184   TGACGCCAGGGAACT               GGCGG GCACG CCGCA               TGGTCTGAGCAGAAG  39 38
CXD81_RS02120  417470 ..  417480 +  -5.4  -3.37533   AGAAGAACGCGTGCA                 GGAA GCG TTCC                 TTGATGGTTTTGGGG  49 438
CXD81_RS02135  418874 ..  418929 +  -9.8  -3.13403   CCAGCACCAGCCAGA GGC-T--GCGCCGC-GCGTCGGCAAAGCG CGC CGCCTGGCCG-CGCAGCGGCGCGTACGCC TCTTCGTCGGCCGCC  60 53
CXD81_RS02150  422133 ..  422143 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 54
CXD81_RS02155  423272 ..  423309 + -10.6  -3.53224   GCCGGTCATGGAGCA  GCC--GGCCAGGCGC-ACG CGC CGTTGCGCCCGGCCACGGC  TTTCGCGCAGCGCTA  70 123
        gltS  424569 ..  424580 +  -4.4  -3.16881   GCCGTTCGTGGGAGG                CATG TGAC CATG                 TTCATCCGCTGGCTC  47 19
CXD81_RS02165  426513 ..  426527 +  -2.1  -3.14931   GATCACGATGCCCGC              GCC-TC CCTT GATGGC               TTCGTCCAGGCTGGC  43 455
CXD81_RS02195  432483 ..  432495 +  -6.9  -3.29144   GAACACCAGGGCCTT                GGGCG CGA TGCCC                TTGTGCAGCAGGTCG  52 187
CXD81_RS02220  436057 ..  436070 +  -4.5  -3.53733   AGGCCTGAACAGCGC               CCGGT GATC ACTGG                TGTTTATCACCTCCG  52 33
CXD81_RS02225  438272 ..  438287 +  -6.8  -3.03124   CGGTACGCCGAACTG              CTTGCG CGTG CGCAGG               TATTCCGCCGTCAGC  48 408
CXD81_RS02265  446695 ..  446753 +  -7.5  -2.70932   GCTGCATGAAGGCCT CCAGCACGCGACGCGGCCTGGGCACGGGG ATCCA CGCCATGCCCAGGC-GCAT-G-G-GCTGG TGCTTGCCGGCCAGG  49 189
CXD81_RS02285  451936 ..  451946 +  -2.4  -3.17075   GCGGGACGGCCATGC                 ACGG CGC CCGA                 TTGCGTTGCCCACCA  42 42
CXD81_RS02290  452981 ..  452994 +  -3.7  -2.56596   AACCATCGCCAACGT               CGCCG ACAT CAGCG                TCGATTGATCGACAC  40 4
CXD81_RS02295  454216 ..  454228 +  -4.7  -4.20696   GGGACAGCCTCCCTG                ACCGG CCG CCGGC                TTTTCCCCTTACTCC  66 202
CXD81_RS02305  456949 ..  456963 +  -2.1  -3.17075   CAATAAAGCACCTGG              C-AGGC AAAG GCCTCG               TTGAGTTCCCACAGA  43 267
CXD81_RS02320 NONE
CXD81_RS02325 NONE
CXD81_RS02330 NONE
CXD81_RS02335 NONE
CXD81_RS02340 NONE
CXD81_RS02345  469486 ..  469496 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS02350  470479 ..  470518 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD81_RS02355  471625 ..  471656 + -12.2  -3.03338   TCAGTTCGAAGGTGC      GCAGGCGGGCCAGG CGCG CCTGCTCCTCCTGC       TGTTCGCGGACTTCT  67 101
CXD81_RS02365  473574 ..  473600 + -11.5  -3.58231   GACCCCGCCTTCGCG         GCGGGCGTTCG TGCGC CGGGCGTCCGC         TTGTGTCCATTCTTT  72 53
CXD81_RS02370  474721 ..  474731 +  -2.4  -3.14344   CGATCTGTGATGCGC                 GGGC GAT GACC                 TTGCTCAAGGACCTG  42 31
        prmC NONE
        grxD NONE
CXD81_RS02385  476494 ..  476520 + -22.4  -3.64703   CGCCTGCCTGTACCT         GAAGCCTGCCCC GAT GGGGCAGGCTTC         TTTGCGTACGGCCGC 100 53
CXD81_RS02390 NONE
CXD81_RS02395 NONE
CXD81_RS02400 NONE
CXD81_RS02405  482468 ..  482483 +  -3.2  -3.17685   GGGGAGTTTGTCGAT              GGAGTT CACT AACACC               TTCCATGTGTCCTTG  44 14
CXD81_RS02410  482990 ..  483038 +  -7.9  -3.14132   CGCGGCGCCTGTAGC CGCGGCC-GCGCCCGCGGGCAG CGTGGT CAGCCCGGATGCGCAGGCTGTG TTGCTGCAGGCGCAG  54 130
CXD81_RS02415  483278 ..  483302 +  -7.8  -2.91582   TTCCGATACGCGAGG         CGCCTG-TCCC GCAT GGGAACTGGCG          TCTGTCCGTGCAGTG  52 61
CXD81_RS02440  488442 ..  488485 +  -9.5  -3.44222   CGGTAGGGCGGGGTT CGGTGTGGGTGCCAGTCCCC GCAAG GGGGACAGGCA-CCGTGGCG TTACTTGCTGCTTTG  63 35
CXD81_RS02485  495903 ..  495933 +  -8.2  -3.53012   CTTATCCCTGATCCC      GGCGCTGGCC-GC CATGGC GCTGGCAGGCGCC       TTTCCCGCGCCGAGC  62 194
CXD81_RS02495  498983 ..  498999 + -10.8  -2.73875   GAAGGTCCTGACCGG              CGCGCG GGTGG CGCGCG              TGGTGTTCCAGAACC  60 372
CXD81_RS02505  501372 ..  501389 +  -8.3  -3.90112   GACAGGGCAGGGCCG             CGCCGCC GCCA GGCGGCC              TTTCCTTGAAAAACC  70 41
CXD81_RS02510 NONE
CXD81_RS02515 NONE
        aspS  504383 ..  504415 +  -9.8  -3.64703   GCCAGCGGCCGGAAT     CGGGC-AGGCCGGGC AATG GCGTGGCTTCGCCCG      TTTCGATAACGCGCC  70 81
CXD81_RS02525 NONE
        clsB  506588 ..  506600 +  -6.2  -3.14132   CGCCGGCCAGGATGC                GCGG CGTCA CCGC                TTCGTCCAGGAACCA  50 111
CXD81_RS02555  511552 ..  511595 +  -8.1  -3.18199   CGAACCGCTGCAGTA AAC-C-G-CGGCGTCCGCCGGC CTC GCCGGCGGACGCTGTCCGCGCC TTGCCTTGCGCCTTA  54 25
CXD81_RS02560  512960 ..  512984 + -10.7  -2.71011   ACGCCGCCTGAAGCG         CGGCGGCCGC CAGCCC GCG-CCGCCG          TGCTTCAGCCGGCGT  60 30
CXD81_RS02570  515012 ..  515042 + -10.3  -3.43446   GGGGCTGGGGCAGCA       GGCCATGCGCGCG CGCAA CCCGCGCCTGGTC       TATTGTTCGGTATCG  65 374
CXD81_RS02580  516751 ..  516769 +  -8.1  -3.47227   CGCGTCGGACAGGCC            GGCGC-CG ATGC CGCGCGCC             TTGTCGTCCTTGCCG  58 209
CXD81_RS02640 NONE
CXD81_RS02645  529457 ..  529484 +  -7.6  -3.22884   GCCCCCTTACCGGAA        GTC-CGGCGCGCG CTT CTCGCGCAGCGAC        TTGATGCCTTCGTGC  56 114
CXD81_RS02655 NONE
CXD81_RS02660  531708 ..  531739 + -13.1  -4.20516   CTCGCGGCGCCGCCG      CGTTGCGTCTGGCC TGTCT GGC-AGACGCGACG      TTTCTTCCGTCCCCC  91 149
CXD81_RS02670  534592 ..  534623 + -17.2  -3.53012   TGGCCCAACCTATCT      GACCGGCCGGGCCG GCGA CGGCCGGACCGGTC       TTTCGAAGACCACCA  89 24
CXD81_RS02675 NONE
CXD81_RS02680 NONE
CXD81_RS02685 NONE
CXD81_RS02690 NONE
CXD81_RS02695  540370 ..  540397 + -21.4  -3.62597   TGCACCAAGGGCGTG        GGTGCCTGTCCC CGTG GGGACAGGCACC         TTGTTCCCCCCTCCG 100 56
CXD81_RS02775  557516 ..  557540 +    -7  -3.01791   GAACAGGTTGAAGTA          GCTGGCCGCG TCCAT CGCCGCCACC          TGTTCGGCCGGCGAT  51 234
CXD81_RS02790 NONE
        folB NONE
        ttcA  563631 ..  563641 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS02810  564771 ..  564790 +  -3.4  -3.30124   CGTTCACATAACCCA            GGTGCGGC GTAA GCAGCACG             TTGTCCAGCGTGCGC  47 151
CXD81_RS02840 NONE
CXD81_RS02845  571103 ..  571128 +  -6.7   -4.7497   GAAGTGCAGCGCCAA         GCCCGGAACCCG TAA CTGGA-CCGGGC         TTTTTGCTGCATGCC  84 212
CXD81_RS02850 NONE
CXD81_RS02855 NONE
        trpD NONE
        trpC  575184 ..  575216 + -12.6   -3.8186   CCGGCCTCAGCGGCC     GCTGCCG-CGCGCCG GCGC CGGCGCGCCGCCCGC      TTCTTCCTTGCGATG  81 55
CXD81_RS02880  579047 ..  579079 +    -9  -3.04322   GGGCGGTCTGGAACA      TGACGCTGCGCGCC TGCTC GGCGCGCATGGCCA      TCTTGGCCAGTTGCC  57 46
CXD81_RS02890  581239 ..  581280 + -10.1  -2.78463   ACAGCACCAGCGATT CGATGTC-GCTGCCCACCTG GGT CAGGTCGGCGGCCGTCATGG TGTGGTCCACGCGCT  56 113
CXD81_RS02925  587494 ..  587529 +   -19  -3.14132   GCGTGCTGGCGTATG    ACGGGGTGCCTGTCCC CGCT GGGACAGGCACCCGGA     TTCCTGCGGGAAGAG  90 76
CXD81_RS02940 NONE
CXD81_RS02945  591939 ..  591957 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 202
CXD81_RS02970  601203 ..  601222 + -12.8  -5.60993   TTACAGGTAAAAAAA            CCGCTGGC CCTT GCCGGCGG             TTTTTTTATGCGCGG 100 51
CXD81_RS02980 NONE
CXD81_RS02985  605027 ..  605083 + -16.4  -2.80398   AGGGACGTTGCGCGC CGGCGTCCCG-TCCCGGGTGCGGCGCC TGGC GGCGCCGCACCCCGTATCGAGTTGCCA TGCTTGCATTCATTC  77 49
CXD81_RS02990  606437 ..  606486 +  -6.4  -3.73775   GCCGCGCCCGCCCAG CAGGCGCGCGCCGGCGCCGC CCATCTGGACAT GCGGCG-CGGCGT-CGTCGG TTTCGTCGGCGTCGG  59 171
CXD81_RS03000  607824 ..  607879 +  -2.5  -4.45175   ATACGTCTACACGAT GAACCGTGTCG-GCAAGATCGTGCCGC CCAA GCGGCA-GATCCTGCGCGACATCTCCC TTTCCTTTTTTCCTG  67 143
CXD81_RS03015  610329 ..  610344 + -11.8   -4.7497   CGCCTCAACGAGAAA              CCCGGC TTCG GCCGGG               TTTTTCGTGGCTGCC 100 66
CXD81_RS03020  611678 ..  611716 + -20.3  -3.25113   CGGGGACCAAGATTC   AGCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGAG   TATTCAGTTTTGCGG 100 68
CXD81_RS03045  617477 ..  617504 +  -9.2  -2.61582   GTATCCGCGCCCGCA        CCG-AGATCAAGC CGC GCTGGATCTTCGG        GTTCTGGGTGGGGTC  54 390
CXD81_RS03070  622773 ..  622784 +  -7.2  -3.95456   GCTAGCCAGTTCCCG                GGGC CGCG GCCC                 TTTCCTGTTCCGTTT  66 36
CXD81_RS03075  624106 ..  624148 + -14.1  -2.78384   CGGTTTCGAGCAACT GGCGCTCGTCGGGGCCGATG TGGC CGTCGGCCTTGGCC-GCGCC TATCATGGCCACCAG  67 302
CXD81_RS03085  625233 ..  625251 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 214
CXD81_RS03110  630294 ..  630307 +  -2.3  -3.02166   GCCGACGATCCGGGC               CGGTG ATAA TGCCG                TACTTTCATTCCGGC  41 20
CXD81_RS03115  630975 ..  631009 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS03150  639160 ..  639173 +  -5.9  -2.87931   ACCGTCAGCCGCGTC               CTGGC CCGC GCCGG                TCTGTCGCACCTGGC  48 330
CXD81_RS03190 NONE
CXD81_RS03195 NONE
CXD81_RS03200 NONE
CXD81_RS03205  648725 ..  648778 +  -4.3  -2.94144   GCGCGGGGGGTGCAC TGATGATCCGCCTGCCGCTGCGCCGC GCC GCGCTCCTGCCGCTGGCCG-TCATCG TCCTTTACCTGCCGG  44 23
CXD81_RS03210 NONE
CXD81_RS03215 NONE
CXD81_RS03220 NONE
CXD81_RS03225 NONE
CXD81_RS03230  654057 ..  654093 +  -7.9  -3.85698   CATCGATGACTTGCG   CGTGCTGCGCGCCGAC GCGCTG GCCGGC-CGCAGCGCC    TTTGTCAGCGGCGCC  66 110
CXD81_RS03240  655866 ..  655880 +  -3.4  -3.78934   GATACCCGCAACGAT               CCCCGG CTT TCGCGG               TTGTTCTCCAACCGC  56 202
CXD81_RS03250 NONE
CXD81_RS03255 NONE
CXD81_RS03280 NONE
CXD81_RS03285  666452 ..  666479 + -11.4  -4.50976   GTAGCGCCCCGGAAA        GCCCGCATAAACT TCA GGTTT-TGCGGGC        TTTTCTCATCTGGAC 100 63
CXD81_RS03290  667004 ..  667023 +    -7  -3.08679   CCGTAGCTGAAGAAC            GCGTCAGC GAAG GCGGGCGC             TATTGCATCGAGCCG  52 35
CXD81_RS03305  668080 ..  668090 +  -3.2  -3.41602   GGGTGATGGAATGAA                 TGCC CTG GGTA                 TTGTGATACCATGCA  48 27
CXD81_RS03310 NONE
CXD81_RS03315  669504 ..  669537 +  -4.6  -4.36411   CCAAGCTGATTACCG    TCCACAACCCGGTTGT CTGA GCA-CCGGGTCG-GGA     TTTTCGTCATTCATG  69 6
CXD81_RS03320 NONE
CXD81_RS03325 NONE
        ureC NONE
        ureE  672879 ..  672906 +  -6.8   -3.1372   GTTGCATCTGTCTTC        GCCGGCGCTGCC GATC GGCGGCTTCAGC         TATTCGTAGGGCCTG  52 62
CXD81_RS03340 NONE
        ureG  674270 ..  674310 +  -8.7  -3.58726   GCTTGCCGAAGATTC  CCGCGCACGCGCTTGCTCG GTG CGGGCCGGCGCGCCTGCCG  TTATATATAGAGGAC  62 99
CXD81_RS03390  687294 ..  687311 +  -9.1  -3.16564   CAGGGCAGGGCGTTG             TCGCGTC CGAT GACGCGG              TTGGTCGAATAGGCG  56 422
CXD81_RS03410  690082 ..  690105 + -16.8  -6.06723   CCTTTGGTGGATTTA          GCCCGAGATC GCAA GATCTCGGGC           TTTTTTTTTCGCCGC 100 465
CXD81_RS03415  691551 ..  691561 +  -6.8   -3.1506   CATACAATTCCGTAG                 CCGT CAC ACGG                 TTGATAGGGAGATTT  52 102
        tviB NONE
        tviC  693875 ..  693887 +  -4.8  -3.51232   CCATGCCCTGGTACA                CGCA ATTCC TGCG                TTGATTTGAAAGCCA  52 9
CXD81_RS03430 NONE
CXD81_RS03435 NONE
        asnB NONE
CXD81_RS03445 NONE
CXD81_RS03450 NONE
CXD81_RS03455  702068 ..  702095 +    -9  -2.60571   GCCAGGATCTCGGCC        TGCTGCGGGTCG GACT CGACCAGCCGCG         CTTCCTTGAGCGCTT  51 325
CXD81_RS03470 NONE
CXD81_RS03475 NONE
CXD81_RS03480  707842 ..  707867 +  -3.1  -3.54543   GGCTGGCGCTGCCGG         CGGGTGGCGCA TGAG TGCACGGCCTG          TTTCCGGCAATGGAT  49 12
CXD81_RS03485  709236 ..  709262 +  -5.9  -5.40072   ATTTGACATCGATTT        GACGCCCAA-CA GGTA TGCTTGCGCGTC         TTTTTTTGCAACGAG  95 87
CXD81_RS03490  711475 ..  711494 +  -7.1  -3.16564   CGCCCCAGGGCAGGT            CGAGCGGC TGCTT GCCGC-CG            TTGGTCAGCTCCAGC  53 285
CXD81_RS03505  715258 ..  715284 + -10.8  -3.18582   GGCCAGCAGCAGGAT         CAGCGCCGCG TTCAGCT CGCGGCTCTG         TTCGTCGCTGAGGTC  64 131
CXD81_RS03530 NONE
        lolB  721537 ..  721553 +  -6.5  -2.52896   CGGCGGTCTAGAATA              GGGGC ATCCCCA GCCCC              TCGCTTCCGCCGTGA  45 46
CXD81_RS03540 NONE
CXD81_RS03545  722560 ..  722602 +  -4.2  -5.79595   CCAATACATAAAAAA GCTGTTGAAC-G-CGCCCGT CAGAC ACTGGCTCCAGTTCAGCAGC TTTTTTGTTTTACGA 100 43
CXD81_RS03550  723679 ..  723703 + -12.8  -4.07885   GCGGCGCGCAAAAAC          CACGCAGCGC ATGTC GCGCCGCGTG          TTTTAACCGGCGATC  83 81
CXD81_RS03555  724414 ..  724452 + -24.8  -2.91695   CGTGCCCGACGTCCC   CGAAACCCTGCGCATGCG ATT TGCATGCGCAGGGTTTTG   TACTTTACAAATACG 100 79
CXD81_RS03560 NONE
CXD81_RS03565 NONE
        ychF  727081 ..  727099 +  -6.7  -3.05816   TGGTGGACAGATTGG             CCCGTTG TAAAT CAATGGG             TTGCATAAACAATAC  51 78
CXD81_RS03575  728477 ..  728504 + -16.4   -3.4285   GCGAAGTGGGTAGAA        CGGCCTTATCCT TTTC AGGATAGGGCCG         TTGTCCCTTGAGTGC  85 67
CXD81_RS03580 NONE
CXD81_RS03585 NONE
CXD81_RS03590 NONE
CXD81_RS03595 NONE
CXD81_RS03600  737252 ..  737265 +  -3.1  -2.79183   TGGTGACCTTTTCGG               CGAGAC GGA GTC-CG               TATGATACAGATAGC  40 7
CXD81_RS03605 NONE
CXD81_RS03610 NONE
CXD81_RS03615 NONE
CXD81_RS03620  739530 ..  739549 +  -6.4  -2.64243   ATTCCAGCACCCAGA            CGCGCAAT GCCG ATTCCGCG             TCATGTCCGATATGG  46 379
CXD81_RS03630 NONE
CXD81_RS03635  741408 ..  741422 +  -3.5  -3.72893   CGCGTTGCTCTGTCG               TGGTG ATGGG CACCG               TTTGCTCCCGACCTC  54 436
CXD81_RS03665  749540 ..  749567 + -10.5  -3.08679   GCCAAGCGCGGCGCC        GGCG-GCGCGCC GGCCG GGAGCGCTCGCC        TATTGCCTGGCCCCG  62 49
CXD81_RS03675  752120 ..  752147 + -13.4  -3.34398   GCGCAGTTCTTCATA        TCGGCTGCTGCC GCGC GGCAGCAGCAGG         TCTTTCCAGGCGGCA  74 237
CXD81_RS03705  757315 ..  757333 +  -4.6  -2.78596   CAGAAAATATATATA             CCTACA GAAAACA TGTAGG             TATAATCCGAACATC  43 85
CXD81_RS03710 NONE
CXD81_RS03715 NONE
CXD81_RS03720  761030 ..  761048 +    -3  -3.01001   CCCCTCGCATACAAC             GACAAGGA GAC TCCATGAC             TGTCATTTCCCGCTA  42 163
CXD81_RS03725  762064 ..  762104 +  -4.7   -3.2794   AACTAGGCTTGCGGG TGGCTACCGGG-TGCGGGCC GCAA GCCCCGCAGCCCGGC--CCA TTGGTGTCCATGGAC  49 35
        modA  763237 ..  763281 +  -9.2  -2.64616   CCCTGCTCAAGGCCT GGTCGCCGGCGCTGATCC TGCTGAAAT GGATCGGCGGCGCCTACC TCGTCTACCTGGGCA  54 302
CXD81_RS03740 NONE
CXD81_RS03745 NONE
CXD81_RS03750  765351 ..  765379 + -11.6  -3.30771   TCGACATCGGCTCGG        CCGGCCGCGTGG AAGTG CTGCGCGGCCCG        TTCTCGGCCCTGTAC  68 419
CXD81_RS03760  767677 ..  767688 +  -7.2  -5.30616   CAGTCCATGAACCAC                CGCC TTCC GGCG                 TTTTTATTTCCCTCG  95 113
CXD81_RS03765 NONE
CXD81_RS03770  768234 ..  768260 + -13.7  -3.09831   GTCGGTCTCGCCCCA        TGACGGCCGCCC CCCG GGGCGGCCG-CG         TCCTTTTGCGGTACG  73 51
CXD81_RS03780  769859 ..  769875 +  -5.7  -4.36914   AGGTCCGCTAAGCGG              GCGGGGC GCG GGCCTGC              TTTTGTGGGCGCGAC  72 30
        modA  770755 ..  770765 +  -2.4  -2.61264   CTGTAACCCCTTGCA                 GGAG TCC CGCC                 CTTGTCGCTGACCAG  38 35
        modB NONE
        modC  772937 ..  772960 +  -5.2  -3.72576   CCCTGCCCTGCGGCT          TG-GGCCCGGC GTA GCTGCGCCGCA          TTTCGTAAAGCCGCA  58 394
CXD81_RS03810  776439 ..  776460 +  -6.5  -2.87132   TTTCCCTTGTTCGGC           CTGGCGCAT GCAT ATGCGCCGC            TATATGCGGCAAGGA  48 257
CXD81_RS03815  778179 ..  778229 +  -5.1  -2.50034   CGGCTAAGGCCTGAC CCAACCGGACCAT-GCGGCGCGGG CCTG CCCGCGCCGCTGCGCTCCACCGGG CGTTTTCCCTTCATG  44 34
CXD81_RS03820  779492 ..  779509 +  -9.1  -3.14132   AGCGCCTGCAAGCGC             GCCTGGCG CAG CGCC-GGC             TTGATGCGCGCCGGA  56 68
CXD81_RS03835  783383 ..  783407 +  -8.4   -4.1899   GCGCTGAACACGCCA          ACCCGGGCGG CCCGT CCTCCCGGGG          TTTTCCCTAGGGTCG  76 34
CXD81_RS03840 NONE
CXD81_RS03845  786071 ..  786086 + -11.8  -5.18357   TGTCCATCCGGAAAA              GGCGGC CGCG GCCGCC               TTTTTTCATGCCTTC 100 50
CXD81_RS03850  787315 ..  787349 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 259
CXD81_RS03890 NONE
CXD81_RS03895  795822 ..  795840 +  -2.2  -3.57263   ACTGAAACGGCGGCC             ATCCCGGG CGT CCAGGGGC             TTTCCGCGTCGGAAT  48 36
CXD81_RS03900 NONE
CXD81_RS03905 NONE
        xerC  798890 ..  798925 +  -8.9  -2.80816   AGCGGTGCCGGACTT    CGC-CCTCGACGCCGG TGAAC TCGGCGTCGCGCTGCG    TGTACTCGATCAGGC  52 436
CXD81_RS03945  805700 ..  805726 +  -3.8  -3.93556   GCTCCGTCCCCTCTT         GAAGATGG AAATTCCGCCC CCATCTTC         TTTCGTTGCATCGAT  59 76
CXD81_RS03950  807144 ..  807160 + -10.1  -2.57795   AGCCAGGCGCGAATA              TTCGGGC CGC GCCCGGA              TCGATTCATAGTGGA  57 128
        dksA  807699 ..  807722 + -13.2  -5.07652   CCGAACGCATTACCA          GGGCTATGCT CCAC GGCATAGCCC           TTTTGTTTTCGGACC 100 76
        hslV NONE
        hslU  809673 ..  809698 + -11.9  -3.81027   CGGCAGCCAGGACCT         GGCC-CGCTACG TGC TGTAGCGCGGCC         TTTCCCTTACTTGGA  79 7
CXD81_RS03980  811034 ..  811044 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD81_RS03985  812027 ..  812066 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD81_RS03990  813436 ..  813453 + -11.3  -2.56596   TTGGCCCTGGCCAGG             CAGCGCA TCGA TGCGCTG              TCGCTTGATGCGCGC  59 364
CXD81_RS04025 NONE
        zapA  820618 ..  820632 +  -2.8  -2.95102   CTCGCGCGCAGTATT               CATGCA GTA TTCATG               GTTTGTCCCTGCCGT  42 55
        ssrS  820822 ..  820856 + -12.3  -3.05993   CAGGCGGGGCATCTA    TCC--AGGCAGGCCTGT ATC GCAGGCCTGCCTTCGGA    TGTCTCTCTCCCTCC  67 27
        ilvD NONE
CXD81_RS04060 NONE
        msrA  826620 ..  826651 + -10.8  -3.69256   GGATGCCTTCGCCGC      GGTACAGGTCCAGG TATT CCTGGATCTGCCCC       TTCTCTTCGGTGCCT  74 458
CXD81_RS04075  828260 ..  828274 +  -4.9  -3.56643   GCGACGAAGCCGGAA               CCGCG AATCA TGCGG               TTTGCAGGATCTCCG  52 289
CXD81_RS04080 NONE
CXD81_RS04085 NONE
CXD81_RS04090  830719 ..  830757 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CXD81_RS04095  833981 ..  833991 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf  834166 ..  834200 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CXD81_RS04105  835143 ..  835163 +   -14  -4.54727   CGGTTCCGCTCGCAA            CGGCTGGC TTCGT GCCAGCCG            TTTTCGTTTGCAGGC 100 56
CXD81_RS04115 NONE
CXD81_RS04120  838399 ..  838453 +  -9.9  -3.56862   TCGCGCAGATCCCAG GCGCTCAGCCGTGCCGCG-CGCACC GGCTTGG GGCGCGCCGCGGCG-GGCTTGGCGG TTTCGGCGGGTTTCT  67 285
        rnpB  840527 ..  840547 + -19.7  -2.52464   TGCATTTTCATGACA            GCCGGCCGG AAT CCGGCCGGC            TGGCTTACGGCGCCC  93 41
        mraZ NONE
        rsmH NONE
        ftsL  842588 ..  842609 +  -6.5  -4.16016   AACCAGCCCGCCGGA           GGCGCCCAGT GAG GC-GGGTGCC           TTTCTTCGACAATCC  66 14
CXD81_RS04150 NONE
        murF NONE
CXD81_RS04160 NONE
CXD81_RS04165 NONE
        ftsW NONE
        murG NONE
CXD81_RS04180 NONE
CXD81_RS04185  854457 ..  854469 +  -3.3  -2.87132   CGGCGCGACAAGATT                GAACG GGA CGCTC                TGTGTGGAACGACGC  41 24
CXD81_RS04190 NONE
        ftsA  856625 ..  856636 +  -3.6  -3.55622   CCGTTGCGGACCACG                GTCG GCTT CGGC                 TTTGAGGCGATTCAC  51 127
        ftsZ  858081 ..  858092 +    -3  -3.63968   CCGGTTATGCCGGTG                TCTA TTGG TAGA                 TTTCCGGCTTTCGCA  53 210
CXD81_RS04205  859075 ..  859103 + -14.6  -4.57073   CGATATCGGTTTTCG        TCCTATGGCCGC GCTGA GCGGCCATAGGC        TTTTTGGCGGGGATG 100 52
CXD81_RS04215  860734 ..  860759 +  -5.4   -3.5394   CACGGCAGGCCGTTG         CGGTCCAGGT GCGTTA AACTGGATCG          TTTCCCGGCGGGTTT  54 77
        secA NONE
CXD81_RS04225  864469 ..  864482 +  -5.9  -4.19704   TGCGTGATCCATGGA               TGGCC GGCA GGCCG                TTTTCACTGACCTTA  70 161
CXD81_RS04230  865845 ..  865876 +  -8.6  -2.82635   GGCAATGGTGAAGCT      GCCGTGCGGGTCGGC GTA GGCGACGTGC-CGGC      TGTAGTGATCGGGAT  53 368
CXD81_RS04240  866978 ..  867000 +  -4.8  -2.57132   GCGCACGCGCGGCGC           GGGCGC TGCGGCATAAT GCGCCC           CTTATCGAAAAGGGC  42 10
CXD81_RS04245 NONE
CXD81_RS04250  868836 ..  868867 +  -4.3  -2.62396   GGCGTGCGCCGTGAA      CGGGTTTTGCCTG GCGGGG CATGCCAGGCCCG       TCATCTCGCAAGGTA  42 79
CXD81_RS04255  869760 ..  869778 +  -6.7  -4.37092   ATGCCCAGGCGGGTA            TCGG-CGC CGAT GCGGCCGA             TTTTCTGGAAACCAT  72 212
CXD81_RS04295  877516 ..  877529 +  -5.9  -3.20991   CTGGATCGCAGCGTG               GCCGG CCTG TCGGC                TTGAATTCGGTTGGA  51 8
        aroQ NONE
CXD81_RS04305 NONE
        accC  880338 ..  880388 +  -8.8  -2.55668   GTGCCCAGCTGGCAC CGCGACGACCCCGCCGTGCCGGGC CTGGT GCCCGACGCCGCGCG--CGACGCG ATTCATATCGAACTC  52 422
CXD81_RS04320 NONE
CXD81_RS04325 NONE
CXD81_RS04330  883656 ..  883674 + -13.1  -5.40072   CTGCTTCCGGCAAGA             CGCCCGC TTCAT GCGGGCG             TTTTTTTGCGGCGGC 100 48
CXD81_RS04335  884172 ..  884209 +  -4.8  -2.78384   CCTGCTGTCCCACCT  GGCCGCGATGGCAAGCGC CGTC GCGCT-GTCGCTG-GGCC   TGTACTGGGGCGCCG  43 44
CXD81_RS04340 NONE
CXD81_RS04345 NONE
CXD81_RS04350  886567 ..  886582 +    -6  -2.56838   AGTCCTATCTGATCC              GCCGGG AGTG CGCGGC               ATGTATTTCGATCTA  46 29
CXD81_RS04355  888030 ..  888042 + -10.5  -3.53091   CAGCGATTCCGGCGG                CGGCG TAG CGCCG                TTTCAGACGCCGAAT  67 18
CXD81_RS04385  897636 ..  897651 +  -3.3  -3.53012   GTAATCCCTATAATG              CGAAA CAAATA TTTCG               TTTGCGGCGAAAACA  49 155
CXD81_RS04390  898291 ..  898305 +  -5.6   -4.6951   GTCGGCAGTCCGGCA               CGCGGC GCT GTCGTG               TTTGTTTTGCGTGGT  77 185
CXD81_RS04395  898861 ..  898916 +  -3.3  -3.40522   TTGTCGCCAGCGGCG CGCCAT-TCGGGTA-AGGTGGCGGACTT CCC ACGTC-GCCGCCGCTACCCGCCATGTCG TTGTCGTCCGAAAGT  48 44
CXD81_RS04400  900356 ..  900378 + -11.2  -3.01712   TCAGGTGCTGGGCCG           CCAGCTCGGC GGG GGCGGGCTGG           TATTCGCCGCAGAAC  62 283
CXD81_RS04410  904269 ..  904303 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS04430  907717 ..  907727 +  -2.4  -3.78934   TCTTTCGCGATCCTC                 TGCG ATC CGCC                 TTATTGTGACCAACA  54 126
        dbpA  909101 ..  909115 +  -4.2  -3.28712   CGGCGGTTCCGCATG               CGCTTC CTG GAAGAG               TTCTGAGCGCGGCGG  47 5
CXD81_RS04440  910112 ..  910141 +   -12  -3.16564   CAGACCACGCTGCCG       CCGGCGGCGCGC ACCGCG GCGCACAGCCGG        TTGATGGGCTGCACG  68 521
        pmbA  915928 ..  915953 + -19.1  -3.02096   GCCGGCGCCGGCAGG         GTGCCTGTCCC CGTG GGGACAGGCAC          TGTCTCGTTCATGGC  90 51
CXD81_RS04480  917361 ..  917395 + -21.5  -3.53012   GCCGCCGTTTCGGTC    CGGCCAGGGGCCGCCC TTCG GGGCGGCCCCTG-CTG     TTTGGGCGCAACGCC 100 45
CXD81_RS04485 NONE
CXD81_RS04490  918474 ..  918503 + -20.9  -3.28791   AAGCGCTAATGTCCC       GCAAAAAGGCCGC GAAA GCGGCCTTTTTGC        TTATGGCGCCCCGGT 100 32
CXD81_RS04495 NONE
CXD81_RS04500  920507 ..  920526 +  -4.2  -2.80074   CTGGAATTTTGAGTC            CTGTCGCG GCTG CGCTATAG             TGATCTTATCCGGGC  41 29
        erpA  920990 ..  921015 + -18.3  -4.54727   CCGGTCCGCGATCGA         GGCCCTTCGGC ATGC GCCGGAGGGCC          TTTTCGTTTGGGCGC 100 53
CXD81_RS04525  926122 ..  926132 +  -4.6  -3.30124   GCGTGTTAAGTTGGT                 GGGG TAG CCTC                 TTATCGAGGGTCCCA  49 19
CXD81_RS04530  926847 ..  926868 +  -2.9  -4.62069   GGGCTTGCTTGAGCC           TGGCTCATG CCGA CTTGAGGCA            TTTTTGCGGTAGACG  71 52
CXD81_RS04535  928321 ..  928342 + -15.9  -5.30155   GCCCGCCGCCGGCAA           GACAGGCCC GCAA GGGCCTGTC            TTTTTTCATTGATGG 100 59
        nrdR  929232 ..  929256 +  -8.6  -2.90194   TGCACGATGGCGTCC         TGCACC-CGGT GCAC GCCGGGGTGCA          TGTGGTTGCGGCCGT  54 330
        ribD  931888 ..  931902 +  -9.2   -2.9006   GCGATCGGAACGCGG               TGCGCG TGG CGCGCG               TCTATCCGATGGGTT  56 98
CXD81_RS04575 NONE
CXD81_RS04580 NONE
CXD81_RS04585  936230 ..  936272 +  -2.5  -3.72576   TTCTCGCGCGAGAAC GCGATGAAGC-GCTGGCCGTC CAG GTCGGCCAGCCGCG-CGCAGC TTTGCTGCGCCAGCG  53 380
CXD81_RS04595  938171 ..  938205 +  -6.3  -3.65522   ATGCGCCGGCAATGG    CGCCGGCC-AC-CGCCG GAC CGACGAGCAGGCCGGTG    TTGTTGCCCTGCATG  57 138
CXD81_RS04605  940254 ..  940299 + -15.3  -3.05498   GCCTGCGCGAAGGCG CGGCGGCGCTGCGCGGCTGACG CCG CATCGGCCGCGCCG-GCCGGTG TATATATATCGCATG  77 6
CXD81_RS04615  941966 ..  942001 +   -19  -2.99319   GTCCCGACCCGTGGC    AAGGGGTGCCTGTCCC GGCG GGGACAGGCACCCCCC     TCTCTCTCCGACATT  90 93
CXD81_RS04620  943194 ..  943224 +  -7.4  -2.66969   GCCGCCCGGGAAACC       GCTGCCGCGGATCG CTG CGATCCGCGCTCCC       TCCGTTGTCTTGATA  50 175
CXD81_RS04625 NONE
CXD81_RS04630  944980 ..  944993 +  -4.5  -3.35813   GAAGCCCGGCCCGGA               GC-GCG AAG CGCAGC               TTGATTGAAATCAAG  51 4
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD  949118 ..  949151 + -28.3  -3.86015   CCGGCCTTGGTTCGC     CGACAACCCCCCGGG CTTG CCCGGGGGGTTGTCG      TTTGTGGCGGGGGTG 100 74
CXD81_RS04685 NONE
CXD81_RS04690 NONE
CXD81_RS04695 NONE
CXD81_RS04705  960310 ..  960326 +  -5.7  -3.44229   CTGGGTGCAATCCCG              GGGGTGC CGG GCGCGCC              TTGTCGTCGTAAGCT  53 54
CXD81_RS04710  961018 ..  961068 +  -2.3  -2.62184   CCAGGCCGGCCATGA CGTGCCAGCCGACGGGCGGACGCGC CAG GC-CGGC-GCCCATCGCCTGGGCCA TCATGTAGGCGCCGG  38 227
CXD81_RS04720 NONE
CXD81_RS04725 NONE
CXD81_RS04730 NONE
CXD81_RS04735  963871 ..  963881 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS04740  965355 ..  965370 +  -2.6  -3.61178   AGTTTTCACGGGGCA              TGGTTA TTCC TAACTA               TTTCAAATGACTCGG  50 495
CXD81_RS04750  966291 ..  966302 +  -3.6  -3.48395   CCAGCCTGCCTGCCC                TGCG TCAT CGCG                 TTCTATAGACGGAAT  49 6
        tldD  967822 ..  967839 +  -6.9   -5.9873   CCTGGCCTGGAAAAA             TCGCGTG GTGA CGCGCGG              TTTTTTTTGTGCTAG 100 66
        aroG  969393 ..  969413 +  -9.7  -2.52464   ACAAGGCGTAATCCT            TCATCGTGG CTG CCCCGATGA            TGGATTCGCGCCGGC  55 307
CXD81_RS04770  983357 ..  983379 + -19.2  -4.72272   CGCGGTGCCCGGCAA           GCCCACGCGA AGG TCGCGTGGGC           TTTTTCATGCCCGCC 100 57
CXD81_RS04775 NONE
        glcE NONE
CXD81_RS04785  987725 ..  987760 + -15.4  -3.68619   GGCGGCCGGTATCGA    CGCGCGTCGTGCCC GCCACCCA GGGCTTGACGCGCG     TTTCGATGAATTCCA  88 408
CXD81_RS04800  991648 ..  991685 + -20.5   -2.6563   GCGCGCGCCGTTAGG   CGGGCCCCGGCGCGGCGC CAT GCGCCGCACC-GGCCCCG   TGCCTTATTCCACGG  95 27
CXD81_RS04830 NONE
        mnmA  998995 ..  999027 + -11.1  -3.73775   GGAGGCGCGCCGGTC      TCGCGGTGGCCGCGG CCG CGGCCGCCACAGCGG      TTTCATAAACCTGGG  73 63
CXD81_RS04840  999913 ..  999968 + -24.2  -3.05596   CGGTCGGCGGCCAGG GTGGCCGGCAATGAAAAAGGCGGCTC ATGC GAGCCGCCTTTTTCATTGCACGCCGG TTCGGTCAGGCGGTC 100 62
CXD81_RS04850 NONE
CXD81_RS04855 1002679 .. 1002694 + -10.4  -5.96521   GCAAGGCAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 62
CXD81_RS04870 NONE
CXD81_RS04875 1006367 .. 1006401 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS04895 NONE
CXD81_RS04900 NONE
CXD81_RS04905 NONE
CXD81_RS04910 NONE
CXD81_RS04915 1012550 .. 1012567 +  -2.6  -2.66869   CGCGCCGGCGCGCCG             GCGCCA AGGAGA TGGCGG              TGAGTTCTTCCATAT  38 49
CXD81_RS04920 NONE
CXD81_RS04925 NONE
CXD81_RS04930 NONE
CXD81_RS04935 1015901 .. 1015942 + -14.5  -3.53012   CGGCGCGCCGCGTCC GCGCG-GCGCCGCC-GCTT CAGGAC AGGCCGGCGGCGCGCGTGC TTTCGGCCGACAAGC  81 43
CXD81_RS04950 NONE
CXD81_RS04955 NONE
CXD81_RS04960 NONE
CXD81_RS04965 NONE
CXD81_RS04975 1023227 .. 1023282 +  -7.2  -3.06696   CGCCGGCCTGGTGAT GGTCGAGGCCACCGCGGTCGAGCCGC GCGG GCGCATCAGCCACGGCTGCCTGGGCC TGTATTCCGACGCGA  51 205
CXD81_RS05000 1026826 .. 1026840 +  -3.5  -2.72344   GTCCAACTGCTGGAG              GC-CGC CCAT GCGCGC               TAATTCGAACTCGAA  41 8
CXD81_RS05005 NONE
CXD81_RS05010 1028569 .. 1028585 + -10.8  -3.31144   GCCTGAAGGTATCGA              GCGCCG GCGAG CGGCGC              TTGTAGCCCTCGGGC  66 35
CXD81_RS05025 1031584 .. 1031599 +  -2.5  -3.33696   TACAGATCAACTGAG              CC-GGC CGACC GCCTGG              TTCATTACCCAGGAG  44 27
CXD81_RS05030 1032997 .. 1033027 + -21.8  -3.23899   CGCGCCGCGCTGAGC       GGCGCCTGGCCGGC CGT GCCGGCCGGGCGGC       TTGCCTTACTTGAGC 100 28
CXD81_RS05040 1035067 .. 1035103 + -23.8  -4.26076   CCCGCCGCTCATCCC   GGCGCGGACGGCTTCCC TCGC GGGAGGCCG-CCGCGCC    TTTTCATGGCGGTGC 100 70
CXD81_RS05045 1035959 .. 1035992 +  -8.7  -3.18681   GGCGGGCGTAGTGCT     CGGC-GTTGCCGGCCT GCT GGGCCGGCGTCAGCAG     TTCGTCGGGTTCGCG  56 400
CXD81_RS05060 1039077 .. 1039119 + -12.6  -3.16564   GGCCAGGCTGATCAG CGCGGCGAACATGGTGCTGG TGT CCAGCGTGGTCGTCGCCGCG TTGATCAGGTAGCCC  68 140
CXD81_RS05095 1044891 .. 1044901 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 178
CXD81_RS05105 NONE
CXD81_RS05110 1049143 .. 1049164 + -12.9   -3.8591   CGTGTCGGTATCCGC           GGGCGCGGG CGTG CCCGCGCCG            TTATTCATTGTAGGA  83 52
CXD81_RS05115 1050549 .. 1050574 +  -3.1  -3.15544   CGAAGGCGATCTGCG         GCGTGGCGTAA TAGC TGGCGGCGCGC          TTGGTCAGCATCAGC  43 186
CXD81_RS05125 NONE
CXD81_RS05130 NONE
CXD81_RS05135 NONE
CXD81_RS05140 1055430 .. 1055440 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 154
CXD81_RS05145 1056907 .. 1056917 +  -8.2  -3.13899   CGAAATCGTACATGC                 CGCC CAG GGCG                 TATTCCTGCACGCTT  56 488
CXD81_RS05160 1060165 .. 1060199 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS05175 1062163 .. 1062176 +  -3.8  -3.53224   GGGTGCGCGTTCGCG               GCGA CTTTGA TCGC                TTTGACGGGCAAATG  51 314
CXD81_RS05185 1064078 .. 1064093 + -10.4  -2.89881   GCAATGCGCACAGGG              CTGCGG TTCG CCGCAG               TGTGTCGAATGAATA  59 243
CXD81_RS05195 1064500 .. 1064515 +  -6.1  -3.31461   GGTCCGGGTGTCTTT              GCGTG GCGAGA CACGC               TTGTCCCAGTGGGTG  53 55
CXD81_RS05200 1065742 .. 1065770 + -17.5  -4.11216   GGCTCTAGAAACCAA        GGCCTTGCAACTC GAT GCGTTGCAAGGCC        TTTTAAAAATGGCGG 100 127
CXD81_RS05225 1068279 .. 1068289 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 65
CXD81_RS05230 1069417 .. 1069473 +  -7.9  -3.63694   AAGAGCACGCTCAGG GCCACCGCGCCGGCGCCGCG-GGCG-GCC AGC GGCCCGACATGCA-CGCCGGCGTCG-GGC TTCTTGAAGCTGCCT  60 149
CXD81_RS05250 1073185 .. 1073209 +  -5.6  -3.91897   GGACAGCCTCGTCCT         GGCGCGCCAGC CGTC GC-GGCCCGTC          TTTATCCGTGCAACG  63 51
CXD81_RS05305 NONE
CXD81_RS05310 NONE
CXD81_RS05315 NONE
CXD81_RS05320 NONE
CXD81_RS05325 NONE
CXD81_RS05330 NONE
CXD81_RS05335 1088515 .. 1088542 +  -4.7  -4.07568   CGCCCCTGCCACCTC        GGCCATCGCCT GCACGA ACGCGGCGGCC         TTTTCCGCCACGCCG  63 253
CXD81_RS05380 NONE
CXD81_RS05385 NONE
CXD81_RS05390 1100362 .. 1100386 +  -3.4  -3.61517   GCACCATTGCAGCAC          CGCTTCGGCC GTCAG GGCCGGATCC          TTCTTCACGACGAAT  51 154
CXD81_RS05400 1103286 .. 1103322 +  -5.1  -3.13403   GAGCGTGCGCGTCAG  CGGC-CGC-GGCAGCAGC CGCA GC-GTCGCCAGCGAGCCG   TCTTCGTGCCGCACC  47 132
CXD81_RS05410 1105216 .. 1105242 +  -4.3    -3.445   GGAATCGTGAAGCTG         GCGACCTGAGC CGCGC GCTTAGGACAC         GTTTTTCCTGCATAA  51 17
CXD81_RS05415 NONE
        mgtE 1107313 .. 1107323 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 157
CXD81_RS05445 NONE
CXD81_RS05450 NONE
CXD81_RS05455 NONE
CXD81_RS05460 1116106 .. 1116122 +  -2.2  -3.13522   GCCCGTGACAGGTAA              GGCGAA ATGAA TTCTCC              TATTGATCCCGCGAT  42 176
CXD81_RS05465 1117074 .. 1117087 +  -2.3  -3.09933   TGGCGGGCTATCCCT               TGCCG GGGC CAGCA                TTGCATGGCTTGCCG  42 190
CXD81_RS05470 1117513 .. 1117527 +  -7.1  -2.70932   GCGGCCGAGTAACAG               GGCTC AGACA GAGCC               TGGTTGGCAGACCCA  48 29
        priB NONE
        rpsR NONE
CXD81_RS05485 1118739 .. 1118755 + -10.8  -5.75342   GCATGCCTGAAAAAA              GCCGGC CTGGT GCCGGC              TTTTTTTTCGAGGGC 100 48
CXD81_RS05490 NONE
CXD81_RS05495 1121174 .. 1121207 +  -2.9  -4.56597   CTGTCCGGCAAAGAT     CACCTGGGCCATCGG GATA CCGCTGGCCAGGCTC      TTTTTCGAGCCGCAG  71 160
CXD81_RS05525 1127250 .. 1127264 +  -2.1  -3.07935   TCAAGGATATGTTCC               GCAAG GACGG TTTGC               TTAAATGAATCCGAT  41 3
CXD81_RS05530 NONE
CXD81_RS05535 1130002 .. 1130039 + -28.5  -4.26076   CAGGCTGTTTGCAAG   GGCAACCCCCGGCCGCC GCAA GGCGCCCGGGGGTTGCC    TTTTCATGGCCGTCC 100 51
CXD81_RS05540 1130474 .. 1130498 + -17.1  -4.36914   GAACCGTGAAAAAAA          GCCCGCCGGCG CGA TGCTGGCGGGC          TTTTCTCGCGCAAGC 100 88
CXD81_RS05545 NONE
CXD81_RS05550 1132844 .. 1132861 +  -4.1  -2.52464   CAGCCACCGCTGGTA             CG-GGGTC AAA GACCTGCG             TGCCTTCGGGCACCG  40 130
        garL 1137497 .. 1137514 + -11.3   -4.0616   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTTGCCGTA  81 82
CXD81_RS05635 1146754 .. 1146775 +  -2.8  -3.25072   TGCTGGCGTTGCGGG           CAGCCGGG GGGCGG CGCGGCGG            TTCGGTTATGATGCG  46 109
CXD81_RS05640 NONE
CXD81_RS05645 1148902 .. 1148922 + -19.7  -3.75153   CACGTGCGATCGAGA            CGGCCCGGC CCT GCCGGGCCG            TTTGCATTGCAGCCA 100 47
CXD81_RS05650 1150394 .. 1150417 +  -6.6  -3.05343   GGCGTCCACGGAATA          GACGGACCAC GTTT GGCGTCCGTC           TGTTGGACATCTGCG  49 25
        pcaF 1151744 .. 1151759 + -10.4   -5.1925   CCGGCATGGCAAAAA              GGAGCC TTAG GGCTCC               TTTTTTGCGTTCTGG 100 54
        clpS 1153224 .. 1153242 +    -8  -4.19704   GACCTGATCCGCATC             GGGCGCGG TCG CCGCGTCG             TTTTGCCTGGCCTTG  74 34
CXD81_RS05675 NONE
        pbpC NONE
        clpA 1163033 .. 1163046 +  -4.5  -2.94747   ACTGATCGACTGACC               GTGTG GATC CACGC                TCTCTGATCGCCTGC  45 28
CXD81_RS05690 NONE
CXD81_RS05695 NONE
CXD81_RS05700 1166714 .. 1166742 +  -5.3  -3.16564   GACGCGAAAACAGAA        GGTTAACCTTTTT CGT ATACGGGTTAACC        TTAATACCGTACGCG  49 20
CXD81_RS05705 1170964 .. 1170974 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 292
CXD81_RS05710 NONE
CXD81_RS05715 1173158 .. 1173190 +   -17  -2.71712   TGATCGGCCTGTGCC     GGCGGCGCGG-GCTC CCCG GGGCGCTGCGCCGCC      ATTTGCCGCAGCCGC  80 38
CXD81_RS05720 NONE
CXD81_RS05725 NONE
CXD81_RS05730 NONE
CXD81_RS05735 1176832 .. 1176861 +  -3.3   -3.9461   TGGGCGAAGTCGAGG       CCTGAGCCAGTCC GCAC GCACGGGCGCCGG        TTCTTCTTGCGGAAC  58 21
CXD81_RS05745 1178915 .. 1178930 + -11.8  -5.86061   CGTTCGATTTTCAAG              CCGCCC CTCG GGGCGG               TTTTTTTTGGTGGGG 100 58
CXD81_RS05765 1184933 .. 1184945 +  -6.2  -4.15565   AGACCCATCTGGGCA                GCGG CCTGC CCGC                TTTTGCCATCGTCGG  66 211
CXD81_RS05775 1187822 .. 1187855 +  -5.8  -2.64616   ACGATGGCCAGCGCC     GCGCCGGCGATCTG CACCAC CAGCACGTCGCCGC      TCATCTGGCTGGCGC  45 443
        cyoB NONE
        cyoC NONE
        cyoD NONE
CXD81_RS05805 1193810 .. 1193842 + -14.1  -3.53012   GCGCCACGAGCTGCG     CGCGCGACGGCGCG GCTGAG CGCGCCGCC-CGCG      TTTGCGCCCGGGCGC  78 7
CXD81_RS05810 1194586 .. 1194619 +  -5.1   -4.1899   CATCCGCATCGACGG     CGGCATCACGCGCTCG GTC TGAGCGCG-GCCGCCC     TTTTCAATCCGATCC  69 4
        hutG 1195599 .. 1195633 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS05835 1200371 .. 1200392 +  -7.9  -3.78419   CGCGGGCAGGCACCA           GGCGTCCTG ATGA CGGGGTGCC            TTGTATCTTTCCTCC  66 16
CXD81_RS05840 1201736 .. 1201754 + -13.8  -3.21099   CGCCAGACAAGCAAA             CGGCCGCT CGC GGCGGCCG             TTCGTCATGGGGACA  73 173
CXD81_RS05855 1204228 .. 1204249 +  -2.8  -2.64616   CCTGCCCTGCGCGGC           GGGCCAGG CATGAA CCAGGGCC            TGCTGTACCTGGCGG  39 13
CXD81_RS05860 1205123 .. 1205152 + -23.7  -3.53224   GGTAACTACATACCC       GGGAGCCTGTCCC AGCG GGGACAGGCTCCC        TTTGCCGCGGCAGTC 100 36
CXD81_RS05875 1208177 .. 1208194 +  -2.5  -2.57344   ACCGTACCAGGCCGC             GCCGGCC TTCA GCCCGGG              ATTGTGCGCCGCGTA  38 356
        moaC NONE
CXD81_RS05895 NONE
CXD81_RS05900 NONE
        moaB NONE
CXD81_RS05910 1215403 .. 1215430 + -21.4  -2.70932   CCGAGGGACACCGCA        GGTGCCTGTCCC CACG GGGACAGGCACC         TCGTTCACCCCCCGA 100 138
CXD81_RS05925 1218814 .. 1218824 +  -5.4  -4.09243   GAGAATATGTTTTCT                 TCTC GTC GAGA                 TTTTCCGCGCCTATG  64 105
CXD81_RS05930 1219450 .. 1219467 +  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 54
CXD81_RS05940 NONE
CXD81_RS05945 NONE
CXD81_RS05950 1224693 .. 1224722 +  -7.7  -3.28712   AGCGTGTAGGCGGCC       GGCTGCACCAGCGC GCC GCGC-GCGGCGGCC       TTGTGCGCCAGCGCG  55 297
         ggt NONE
CXD81_RS05985 1232129 .. 1232187 + -21.6  -4.65895   GGTGGGGGCGGCGGG CCGCCGCAGCGGCGGCCG-GCTGCCGCG ATCGG CGCGGC-GCGCGGGCGCCGCCGCGCCCG TTTTTCGGTGGCGAC 100 45
CXD81_RS05990 1233467 .. 1233514 + -11.9  -2.62184   CCCTGGCGGTGGGGG TGCCGTTCGGACTGGCCGCCGG CTATT TCGGCGGCTGGACCGA-CAGCG TCATCTCGCGCGCCA  61 344
CXD81_RS06015 NONE
CXD81_RS06020 1238193 .. 1238208 +  -2.4  -4.10657   CAGCACCAGGGCCTT              GTCGGG GATA CCCAGC               TTTTCGAGGATATCG  61 414
CXD81_RS06030 1239843 .. 1239878 +   -11  -3.97636   GCCCACGCCGACAAG    CAGGC-GCGCCGCAAGG CGG CCTGACGGCGCCGCCGG    TTTCTCCATTCCAGT  79 2
CXD81_RS06035 NONE
        paaI NONE
        paaJ 1241878 .. 1241896 +  -5.9  -3.37796   GGCGTTCGCGGTGGG             CAGCGGC ATCAC GCCGGTG             TTCTCGCTGGTGAAG  55 405
CXD81_RS06060 NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF 1248027 .. 1248058 + -18.8  -3.55444   GGCGGGTTCGCAGGG      C-GCAACGCCGGCCG CCA TGGCCGGCGTTGCCG      TTTCAGGGGTAGACG  95 45
CXD81_RS06090 1250099 .. 1250133 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS06120 1258509 .. 1258530 + -14.5  -5.55769   TGCGCTCCCTACGAA           CGGCCTTTC GCGA GAAAGGCCG            TTTTTTATTGTCCCG 100 50
CXD81_RS06125 1266552 .. 1266586 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS06155 NONE
CXD81_RS06160 1272169 .. 1272192 +    -8  -3.27475   CCAGCACGTACCGGT          GCCCGTGCAG GTTG CGGCACTGGC           TGTTGTGGTCGGGGA  55 406
CXD81_RS06175 1273420 .. 1273457 +  -6.8  -3.53012   AACCAAGCGCCTGCG   CGGCAGGGTGCGCGAT GACTGA AGCGCGCGCCGGGCTG    TTTGCCCGCCGGCGC  58 4
CXD81_RS06180 NONE
CXD81_RS06185 1274908 .. 1274919 +  -7.2  -3.72576   CGCACACCGCGTAGC                CGCG CTCG CGCG                 TTTCCTGCAGCAGCA  64 326
CXD81_RS06195 NONE
CXD81_RS06200 1278011 .. 1278052 + -15.7  -2.52234   GCACGGCGCCGCCCA GCGCAATGCTGCCGGCGGC CAGC GCCGCCGCCATCCATGCGC  GTTCATGACGTTTGT  69 493
CXD81_RS06220 NONE
CXD81_RS06225 NONE
CXD81_RS06230 1283671 .. 1283724 +  -5.2  -3.86897   GCCGTTCTGGTCACG GGCGCGCTGTGGCCCTGTCGT-CCAT CGCC ATGCTGCGCCAGGCCCACGCCG-GCC TTTATGCCGCGTGCC  60 390
CXD81_RS06235 1284196 .. 1284247 +  -2.2  -4.59773   TCAGCCGCCAATACG GCGCGACAGCT-CGCGGGCGG-CCT CGACC AGGACCGGC-GCGTAGCCGTCCAGC TTTTTCAGCGTCACC  70 48
CXD81_RS06255 1289838 .. 1289854 + -10.8  -3.13403   GGTGCAGGACATCAT              CGCGCC CGACC GGCGCG              TCTTCGTGGGCACCG  64 138
CXD81_RS06265 NONE
CXD81_RS06270 NONE
CXD81_RS06275 1294072 .. 1294091 +  -3.4   -3.5764   CGTGTCGTGGAACAG            CCCGGACA TCAC TGCGCGGG             TTTCCCACTGGCGTT  51 510
CXD81_RS06295 1297618 .. 1297632 +  -2.7  -3.14881   CGACAGGCGCGGCGC               GCGCC CGACC GGAGC               TTCGTGACCCGATTC  44 4
CXD81_RS06300 NONE
CXD81_RS06305 1301429 .. 1301463 + -16.5  -2.53995   CTGCCCCCCGTATGA    CGGG-GTGCCTGTCCC CGCG GGGACAGGCACACCAG     TCAGTTCAGCTGGAT  77 61
CXD81_RS06320 1303093 .. 1303112 +  -4.8  -4.57073   GCGTAGAGTTGCTGC            GCGCGCGC ATGG GCGCGGCC             TTTTTCCACCAGATG  72 359
        guaB 1308833 .. 1308870 + -22.2  -4.86731   ATCACGCAATGCATC   GCGCACCGG-CAGAACC GGCCA GGTTCTGGCCGGTGCGC   TTTTATTTCCAACCG 100 58
CXD81_RS06345 NONE
CXD81_RS06350 1310768 .. 1310784 +  -3.7  -4.12902   AAGTCGGTGGATTGA              TAGCTGA ATT TCAGATA              TTTTACAAATAGTTG  61 39
CXD81_RS06355 1311083 .. 1311093 +  -6.8  -3.16564   AGTCCCGCAGGGTCT                 TCCG ACG CGGA                 TTGGTGACATGGGGC  52 8
CXD81_RS06360 1312649 .. 1312699 +  -5.2  -3.75332   CTGGTAGGCGAGCAG GTCCATGGCCAGTCTGGCTTCG TTGGTGT CGGCGGCGAGCTGGCCCTGGGC TTTGGCTTGGCGAAT  58 232
CXD81_RS06370 1314959 .. 1314981 +   -12  -3.58522   GCAAATCCGGGCTTG           CTGGCCGG GCTGTCG CCGGCCAG           TTTCGGCATCGTCAT  72 314
CXD81_RS06380 NONE
CXD81_RS06385 NONE
CXD81_RS06390 NONE
CXD81_RS06395 NONE
CXD81_RS06400 NONE
CXD81_RS06405 NONE
CXD81_RS06410 1323322 .. 1323343 +  -2.8  -2.74999   GGCCAGTCGGCGGCC           GCCGCGCC CGGGAT GACGCGGA            TCCTGTTGCGGGTTG  40 252
CXD81_RS06420 1325210 .. 1325223 +  -3.8  -3.64703   GGGCGCCAGCGAGGC               CAGC AGGGCG GCTG                TTTCGCTGGCCGCGA  54 440
CXD81_RS06435 1328708 .. 1328730 + -10.4  -2.81464   AACGCAATAGGACGG           CGGCGCGGGC AGG GGCCGCGCAG           TATCATGGCTGGTCG  59 119
CXD81_RS06440 NONE
CXD81_RS06445 1329869 .. 1329907 +  -8.6  -2.70932   CTAGGCCGCCGCAAG   GCGGGCGCAAGGCCTCGC GCG GCCAGTCCGTGCGCCACC   TGCTTGCCGGCAACC  52 37
CXD81_RS06450 1331147 .. 1331161 +  -3.4  -3.35073   GGGGACGGACCTGGA               GGCGCG CAG CACGTC               TTCCTTGCCCATGAT  47 204
CXD81_RS06460 1333285 .. 1333331 + -14.5  -3.36273   CGCTGCGCGCCAGCG CAACGCCGCGGCCGTCGATGGCG GCT TGC-AGC-ACGGCCGCGGAGTTG TTGATCTTCAGGCCG  79 298
CXD81_RS06470 1334845 .. 1334873 +  -2.4  -2.57931   CAGGCCGTGGACCAG       GGGCA-G-GCATGC TGA GCGTGCGCGTGGCC       ATTGTCGGCGGTGGC  38 11
CXD81_RS06475 NONE
CXD81_RS06480 1337053 .. 1337070 +  -5.5  -2.63596   CGACCAAGACTGAGT             CCGCGCGT CTG GC-CGCGG             TCCTGTCCAATCACC  44 28
CXD81_RS06485 1338718 .. 1338732 +  -9.2  -3.44146   GATGGCCTCGAGCAG               CGCCGT GCG GCGGCG               TTCGTTGTCGCGGCG  61 408
CXD81_RS06495 NONE
CXD81_RS06500 NONE
CXD81_RS06505 1342156 .. 1342168 +  -6.2  -3.31726   GGGGGGGGGGGGCGC                GCCG GTCCG CGGC                TGTTCTATAACGGCC  53 427
CXD81_RS06510 NONE
CXD81_RS06515 1344732 .. 1344753 +  -2.9  -2.94099   CGAGAAAACCGGCGG           GGCGCGC-TG AAC CATGTGGGCC           TATCTCGTCAGGCGA  41 16
CXD81_RS06520 NONE
CXD81_RS06525 NONE
CXD81_RS06530 1348160 .. 1348180 +    -6  -3.53012   CCGCGCGCGGGAGGC            GGCCGTGG CCTGA CAGCGGCC            TTTGCGGGGGGCGGC  56 13
CXD81_RS06535 1349377 .. 1349390 +  -3.7  -3.16647   TGCCCTGGGCAGCCG               GCCCG ATTC CTGGC                ATTTTCATGCCTGGA  45 85
CXD81_RS06540 NONE
CXD81_RS06545 1350332 .. 1350368 + -18.8  -2.70932   GCCGCCTATGGCCTG   GCG-GGCG-CGCGCTTGC GGG GCGAGCGCGGCGCCGCGC   TCGTTGACGCCGGCC  87 44
CXD81_RS06555 1352152 .. 1352166 +  -3.4  -3.57144   CGCGCTCGCGCAGCG               CCGCCG TCA CGCTGG               TTTCGGCCTGGAACC  51 498
CXD81_RS06565 1353742 .. 1353752 +  -2.4  -2.80816   CGAGAACACCTCGAC                 CCTG GCG CCGG                 TGTGCTACCTGCAGG  40 310
CXD81_RS06575 1354052 .. 1354067 +  -3.2  -4.00066   GCGACGCAATCGGCG              CGCTAT TGTT AAAGCG               TTTGTCAGTTGTCCA  58 98
CXD81_RS06580 1355229 .. 1355263 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 439
CXD81_RS06590 1356861 .. 1356898 +  -3.9  -3.56594   GGTGCCCATATAGTC   GGCGGCCGCGGCCTGGGG CAG CGGCGGGTTG-GGCCGGC   TTTGGGCGAATTTCA  51 491
CXD81_RS06600 1359231 .. 1359244 +  -8.1  -3.28712   CGACCAGGTTGCCCA               GCACG ATGC CGTGC                TTGTGGCCCAGGCCC  55 237
CXD81_RS06610 NONE
CXD81_RS06615 1361134 .. 1361152 +  -2.4   -2.8655   GAAAGCGATGATGCC             TTTCGCTT GAT AAGGGAGA             TCTACTATGCCTCGC  40 16
CXD81_RS06620 1361543 .. 1361573 + -16.2  -4.09685   TACATCGCGGATCGC       TGCAAACGGGGCTG TAA TGGCCCCGTTTGCG       TTTTGAAGGCTCAAA  95 50
CXD81_RS06625 NONE
CXD81_RS06630 NONE
CXD81_RS06635 1365384 .. 1365397 +  -2.3  -3.88137   CCGGACCCCGCCTCT               GCGGA GTGA TACGC                TTTGTCGGCAATTGT  54 17
CXD81_RS06640 1365897 .. 1365926 + -15.8  -4.41047   TACGGCAGGCCGCGA       CGCCGCCTGGTTC TTCGC GAACC-GGCGGCG       TTTTCCTTGGGCGCT 100 61
CXD81_RS06645 1366118 .. 1366152 +   -26  -3.45027   CCCGACCAGTAGTTC     CAAGGCCGTCAGTGAT CAC ATCACTGACGGCCTTG     TCTTTCGTGGGGACT 100 33
CXD81_RS06655 1368234 .. 1368267 + -15.9  -3.14564   AACTGGAGCTGTAGT     CCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGC      TTCCTCGGCCCGTGC  78 27
CXD81_RS06665 1369813 .. 1369836 +  -8.8  -2.58892   TGCCGGGGCGGGGCT          GTGCCGCC ATGCGCGA GGCGGCGC           TCAATTGATCTGCCT  52 263
CXD81_RS06670 1370173 .. 1370196 + -14.6   -5.0925   CAACCAGATCAAAAA          GGCTTGGCGA TTCA TCGCCAGGCC           TTTTTCGTTTTCGCA 100 35
CXD81_RS06675 1370980 .. 1371025 + -12.7  -3.05844   ATGTAGAACTGGATG CGCG-CG-ATACGGCCGCGCA CGTACT TGCGCGGCTGTATGCGGCGGG TCTTGAAGTCCACGA  66 360
CXD81_RS06685 1371868 .. 1371898 + -10.4  -4.86621   GCCGCACCGTGCGCA      GCCGCC-TGCCGC GATAGG GCGCCAAGGCGGC       TTTTTCATTGGGCGT 100 59
CXD81_RS06690 NONE
CXD81_RS06695 1372873 .. 1372889 +  -7.3  -3.20348   TTTGGGGTCGAATAA              TATGCGC ATT GCGTATA              TTCCGTATTCCTCCC  52 89
CXD81_RS06700 1374202 .. 1374260 +  -7.9  -4.07568   TTCCGTCTTCCACGG CCTGGACTGA-GCCGTATCGCGTGGCGC GCCA GCGCCACGCGAGCCCGCGTCAGACGCGC TTTTCCCCGCCCAGC  69 16
CXD81_RS06710 1375875 .. 1375895 +  -6.8  -3.40403   GCGGGCGGGCTGGTT           TCGC-CGCC CACC GGCGCGCGG            TTGTAGTGAAAGGGC  55 180
CXD81_RS06725 NONE
CXD81_RS06730 NONE
CXD81_RS06735 NONE
CXD81_RS06740 NONE
CXD81_RS06745 1382014 .. 1382024 +  -3.2  -3.05384   ATTGCCCTGTGGCGC                 TCGA CGG TCGG                 TTGAGTCCGCAGGGG  42 11
CXD81_RS06750 NONE
CXD81_RS06755 NONE
CXD81_RS06760 1385809 .. 1385823 +    -7  -5.15969   CTATGCGGGCTTGCT               GCCCCC CGA GGAGGC               TTTTTTGCCTTGGGG  93 161
        recA NONE
        recX 1391868 .. 1391914 +  -9.3  -3.33815   CGACTGAACGATGCC GCTTCGTGCGGGCGGCGGCGCGC GAT GCGGGC--CCGCCTGCCTGGGGC TTGCTTGCGGCCCGT  61 34
CXD81_RS06795 1395447 .. 1395467 +  -6.7  -3.40403   GGTCGGCCCGGGCCG            CGTCGCCGG CAA TCGGCTGCG            TTATACTCCCCAGGA  56 153
CXD81_RS06800 NONE
CXD81_RS06805 NONE
        sucD 1398230 .. 1398249 + -16.4  -5.78622   CCGCCTGTCCCAGGA            CGGCCCGC GATC GCGGGCCG             TTTTTTTTCGCATGC 100 57
CXD81_RS06815 1399191 .. 1399233 + -23.5  -5.07652   GCTGAACTACAATAG CGGGCTGTTCGGGCCCCGCC TTCA GGCGGGG-CTGACCAGCCCG TTTTCTTTTGGCCGC 100 47
CXD81_RS06820 1400114 .. 1400147 +  -5.9  -4.03413   GTTCGTGCTGGCCAT     CCTGGGGGTGGTGGC TTCG GTCATCGTCTCCAGC      TTTCTCTGACGCCCT  66 92
CXD81_RS06825 NONE
CXD81_RS06830 NONE
CXD81_RS06835 NONE
CXD81_RS06840 1404735 .. 1404752 +  -2.6  -4.23781   TCCGCCGGCCCGGCG             TCCGGC GACAAA GCCTGA              TTTCATTTTCATCAA  62 8
CXD81_RS06845 1405345 .. 1405386 + -23.8   -4.2231   GCCTGGGGCGGCCGG CGGCGCGGAAGCGA-CGGC AGGCA GCCGCTCGCATCCGCGCCG TTTTGCGTCATGCTT 100 53
CXD81_RS06850 NONE
CXD81_RS06855 1406390 .. 1406409 + -12.8  -5.07652   GCCGGCATGATGCAA            GCCCTCGG TCAT CCGGGGGC             TTTTCTTTTGCCGCG 100 50
CXD81_RS06860 NONE
CXD81_RS06865 1408295 .. 1408333 +   -11  -3.01712   GGGTCGCGGCGTTCA  TGGCGG-CCGCGGCGGCG CCGTC TGCC-CCGCGCACCGCCA  TCTTGGCGCGGCAGG  62 185
CXD81_RS06875 NONE
        cpaB NONE
CXD81_RS06885 NONE
CXD81_RS06890 1414071 .. 1414084 +  -8.1  -3.53012   GCTGATCCGCCGCAT               CGTCG CCAT CGACG                TTTGAGGAGCCGGGC  60 7
CXD81_RS06900 NONE
CXD81_RS06905 NONE
        folD 1417461 .. 1417475 +  -3.4  -3.75933   CGTGCGATCGGAGAA               ATCGCC GCC GGCGGA               TTTGCTCGCGTCTAT  55 187
CXD81_RS06930 NONE
CXD81_RS06935 NONE
CXD81_RS06940 1425202 .. 1425212 +  -6.8  -3.07816   CGTCGATATCGAACG                 GGAG CGT CTCC                 TTGGATAACTCGCAC  51 7
CXD81_RS06945 NONE
        purU NONE
CXD81_RS06955 NONE
CXD81_RS06960 NONE
CXD81_RS06965 1429984 .. 1430005 + -14.5   -5.1287   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 53
CXD81_RS06975 1431381 .. 1431403 +  -9.8  -3.40403   CTTACAGGCCCAGTA           CGGCCTGCAT GTC GTACAGGCCG           TTGTCCTGGCGCGCC  65 76
CXD81_RS06990 1433318 .. 1433339 + -15.9  -6.10489   GCTCTACCAACCCTG           CCTCCAGGC GCAA GCCTGGAGG            TTTTTTTTTGCGGTT 100 48
        hrcA 1437102 .. 1437119 +  -5.5  -3.54382   GCCTGCGCGCGGGGC             GGCGCCT TGAG AGGTGTC              TTCGTGTTTCTTCGC  54 62
CXD81_RS07010 1438236 .. 1438253 +  -8.3  -2.52676   CTGTGGTTGAAGCGG             CGGGCGC GAGC GCGCCGG              TCCATTCCGCGAATG  51 50
CXD81_RS07015 1438564 .. 1438589 +  -3.8  -5.52384   GGGCGGCGACGCGCC         GTCCGGCGGC GTCATG GGAGCCGGGC          TTTTTTTCCTGGAAA  90 54
        grpE 1439209 .. 1439253 +  -5.6  -3.05384   GTCCGGCGCTGGTCG TGGTGTCCGCCGGCCAGGGCTG AAG CAGGCATGGCCGCCGC-C-CCA TTCGATCCCGCCGAG  47 3
CXD81_RS07025 1439649 .. 1439667 +    -3  -2.78725   AACTCCAGTTACTGG             GGGACTGA GTT TCAAACCC             TGATTCCTACCGTAT  40 55
        dnaK 1441652 .. 1441694 + -18.5  -3.27298   GGCCGAACGATGACG TGCGATACGCCCGGTAGCTG ATTC CAGCTACCGGGCGCG-CGCG TTGATGATTCAGAAC  93 42
        dnaJ 1442937 .. 1442966 + -22.3  -2.88249   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 93
CXD81_RS07045 NONE
CXD81_RS07050 1447237 .. 1447268 +  -7.9  -3.85864   TGGGCCAGGCGTCGA      GCA-GCCGGCGCAG CCAGA CCGCGCCGGCCTCC      TTGTTGTAGTGCTCG  67 187
CXD81_RS07070 NONE
CXD81_RS07075 1451107 .. 1451135 + -16.7  -4.38712   CCAGTAAGCGGCGCC        GGGCAAGCCCCCG ATC CGGGGGCTTTTCC        TTTTCTAGCGCTCGG 100 34
CXD81_RS07085 1453059 .. 1453083 + -11.4  -5.02074   GCATCAGCCGAGAAA         CCCGC-GCCCC TATG GGGGTAGCGGG          TTTTTTGCCGAATGG 100 60
CXD81_RS07090 1454261 .. 1454278 +  -3.3  -2.74864   TGTGGGATTCCGTTT             CGGGTTG AGGC CGGTCCG              GTATTTGCTTCTACA  40 83
CXD81_RS07095 1455629 .. 1455639 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS07100 1457011 .. 1457033 +  -7.6  -3.17212   CGCGCAGGCGCGCCA           GCAGTTCGCC GAC GCCGAACGGC           TTGGTCAGGTAGTCG  53 393
CXD81_RS07135 NONE
CXD81_RS07140 1468040 .. 1468074 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS07170 NONE
        lolA 1475030 .. 1475050 +  -3.3  -3.05596   CCTGCGGGCCAAGGC           CGCCGCAT GGTGTA ATGCG-CG            TTGGATCCGCCCGTG  42 74
CXD81_RS07180 NONE
CXD81_RS07185 1477854 .. 1477871 + -11.3  -4.98531   CACGTGAACCAGAAA             CGGAACC CGCG GGTTCCG              TTTTTCATTTCGGCG 100 54
CXD81_RS07190 1478494 .. 1478511 + -14.1  -4.95957   GTGCCGCAAAAAAAG             GCCGCCC ATCC GGGCGGC              TTTTTCATTGATTTG 100 167
CXD81_RS07205 1479902 .. 1479915 +  -9.5  -3.28791   GCCAGGAAGGCTGAC               CGGCC CGCG GGCCG                TTATGCGCCAGCCGT  61 27
CXD81_RS07215 1481543 .. 1481564 +  -7.3  -2.78463   GGGAAGAACACCATC           TCGCGCGCCA TGC TGG-GCGTGA           TCTGCTGCAGCGCCT  49 352
CXD81_RS07270 1494678 .. 1494726 +  -6.6  -2.70932   CCGCCGCGGACAACG AGGAGCGG-TCCG-GCCCGGGC TGACCGC GCCCGGTCACGGATCCGTGCCA TCATTGCCGGCGGCG  47 3
CXD81_RS07275 1495606 .. 1495616 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS07280 NONE
        yaaA 1497421 .. 1497458 +  -3.4  -4.21812   CGCAAGCAGGCCTGA  CAGGACG-CGCG-ATGTC GGCA GGCTTACGCGTCTTCCTG   TTCTTTTCGCTCGGC  63 26
CXD81_RS07290 1499142 .. 1499156 +    -7  -3.72576   CGGCGTCGGCGCGCT               CGCCGG TCT CGGGCG               TTTCCTCGCCCGCCG  61 494
CXD81_RS07300 NONE
CXD81_RS07305 1502700 .. 1502734 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        thrS NONE
CXD81_RS07335 1507988 .. 1508024 + -19.3  -3.05463   CAGGCTGATCCCATC    CCCGGCCCGGTTGCCCT CGA GGGGCGTCCGGGCCGGC    TTGCGTGCGGCCCGT 100 33
CXD81_RS07340 1509080 .. 1509093 +  -3.1  -2.87243   GCCGGCTGAACTTGC               TGCTA TGAC TGGCA                TCGTTATCGTCGTGC  41 32
CXD81_RS07345 NONE
CXD81_RS07350 1509884 .. 1509910 + -10.8  -2.62735   AAAACCTCAGGTTCC         GGCAGCCCGC CGTCGGC GCGGGCTGCA         TCGTCTACGCGCTCT  59 42
        ptsP 1511705 .. 1511722 + -10.5  -5.64006   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT 100 47
CXD81_RS07370 NONE
CXD81_RS07375 1514870 .. 1514888 +   -16  -5.31275   GGGCGCGGCAATGCG             GGCAGGCC TTG GGCCTGCC             TTTTTTGTCGTCAAA 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
CXD81_RS07395 1518028 .. 1518038 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS07400 1519282 .. 1519322 +  -5.9  -3.29144   CGGGGCGGCCCTCGG  GATGCCGCGGGAGGTCATC CGT GATGTCGTGCCACGGCGCC  TTGTGGGCGACGTAG  53 265
CXD81_RS07435 1525216 .. 1525231 +  -7.5  -2.71011   GCGGAACAGGGACCG              GCGCG CCGTCC CGCGC               TGATTGCGAAGGGAT  51 7
CXD81_RS07440 1526482 .. 1526501 +   -15  -5.15634   CGCCCGCATGGAAAA            CCGGACGC GCGA GCGTCCGG             TTTTTTCATGGCCTC 100 72
CXD81_RS07450 1528093 .. 1528119 + -17.3  -5.26875   GCCGGCGCCGTCCAG        GCCCGC-CGCCC TTCG GGGCGCGCGGGC         TTTTTTCATTGGAGG 100 46
CXD81_RS07455 NONE
CXD81_RS07460 NONE
CXD81_RS07465 1529028 .. 1529046 +  -4.4  -2.77523   CCGTGCCCTTGCCGC             TGGCGCTC TGA GTCCGCCA             TGATCTTCCTGCGCA  43 15
CXD81_RS07470 1529629 .. 1529646 +  -9.1  -3.41836   AAAATAGCCGATTCG             CGGC-CGC CTG GCGGGCCG             TCTTTCCATCCCTAT  63 129
        purE NONE
CXD81_RS07480 1531372 .. 1531386 +  -3.4  -2.60075   GCGCTGGGCATGGCC               GCGCCG CTC TGACGC               ATTGATTCCCGCCGC  39 14
CXD81_RS07485 1532471 .. 1532487 +  -7.2  -2.62184   AACTCCTGATTGCCG              CGCCTG CCGGC CGGGCG              TAATCTCACGCGGAC  47 56
CXD81_RS07490 1533611 .. 1533648 + -10.5  -3.06162   CTAGGGCGAGGGCGG   CGGGGCGGGCAAGATCGC CAA GCGATAC-GCCTGTCCCG   TATTGCGGTACGCTA  60 37
CXD81_RS07495 1534552 .. 1534570 +  -5.9  -3.62518   GTATTTGATGGGAGA             GCAAGGG GAATA CCCTAGC             TTTCCGGATCTTTCG  59 50
CXD81_RS07500 NONE
CXD81_RS07505 NONE
CXD81_RS07510 NONE
CXD81_RS07515 1537940 .. 1537963 + -19.6  -2.75064   TGGGTTGAGCCCGGC          CTGCCGCGCG CGCC CGCGCGGCAG           TGGTTCCATGGCCGG  93 33
CXD81_RS07520 1539650 .. 1539680 +    -9  -3.89956   CCGGCACGCCGGGCG      CGATGCCGC-CGCG CAACA CGCGGGCGGCG-CG      TTTGGTCTATCCTGC  73 55
CXD81_RS07525 1540294 .. 1540333 + -12.1  -3.73072   GCACGCGGGGAAGTT  TGCCG-GTGCCAGTCCCC CTTGC GGGGACAGGCACGCGGGG  TTTAGTAGAAGGCTT  77 122
CXD81_RS07540 NONE
        xerD NONE
        ybaK 1545894 .. 1545916 +  -9.1  -2.94144   TCGTCGCATGACCAG          GCCGGCGCGT TACG GCG-GCCGGC           TCCTTTCCATGGAGA  56 100
CXD81_RS07555 1546490 .. 1546504 +  -5.6  -3.57144   CGCAGTTCCTGGCGG               TGCTGG GCA CCCGCA               TTTCGCACTGACCCC  54 0
CXD81_RS07560 1547024 .. 1547034 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS07565 1548498 .. 1548516 +    -3  -4.07885   CGGATAGTTGCGGCC             CAGCGC GTGGGCG GCGCGG             TTTTCCGAGGACATC  58 485
CXD81_RS07580 1551208 .. 1551222 +  -9.2  -3.28712   AACTGGGAAAACATC               GCCGCG CTG TGCGGC               TTCTAGGCCGCGCGC  61 187
CXD81_RS07585 NONE
CXD81_RS07590 1557823 .. 1557881 + -24.1  -2.71731   TGATGGGTCCGGTCG -G-GCCGGGGCTCGCCAGCTACGCATTCT GTT AGAATGCGTAGCTGGCGGGCCCCTTCGCA TGGTTCGGCGGTGAA 100 521
         ffs 1557992 .. 1558027 + -10.7  -2.70932   AGGGGCGCCGTGACC   GGAATGTATCGCGATCC AGGC GGATCGC-AT-CATTCC    TGGTTGCGGCGCCCC  60 54
CXD81_RS07600 NONE
CXD81_RS07605 1560596 .. 1560630 + -13.5   -2.6927   GCTGCCGTTCTGATA    TCGC-CTTGGCGGCCC AGCC GGGCCGCCGGGCGCGC     TGCTGTCTGCGCGAT  67 28
        recR 1561287 .. 1561297 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS07615 1562490 .. 1562519 +  -2.7  -4.13767   CGCCGTCCTCGAGTA       TGACC-AGGCGGGC GTT GCGCGCATCGGCCA       TTTTCACATCCGACA  61 214
CXD81_RS07635 1565538 .. 1565572 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS07680 1574255 .. 1574307 +   -11  -3.28791   CGCGCAGGCATGCTG CGCCGCGCGGCCATCCGGCGGGGCC GCAA GGCGCCGCCGGGCA-CCGCCCGATG TTATCCCCGGCAAAT  66 298
        mutS NONE
CXD81_RS07695 1579184 .. 1579205 + -15.9   -4.4078   GGGCAGGCATGCTAA           TGGCCTCCG GTAA CGGAGGCCA            TTTTCATTGCGCGAA 100 520
CXD81_RS07700 1579988 .. 1580011 + -18.2  -5.40474   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 50
CXD81_RS07720 NONE
        glnH NONE
        glnP NONE
        glnQ 1586466 .. 1586487 +  -8.8  -3.05844   GTGGAAACCGCGTCG           TCGTGCAT CGTGAC ATGCACGA            TATTGGCGTCGGCCG  55 165
CXD81_RS07765 1592288 .. 1592299 +  -4.4  -3.35679   GTTCGTGGGACGCGG                CTGA GGTT TCAG                 TTCTCGCTGGCGGCC  51 22
CXD81_RS07775 1595046 .. 1595056 +  -3.2  -3.89614   TTACGCTCGGCTTTG                 GTCA GAT TGGC                 TTTGTCGCCCTTGGC  58 441
CXD81_RS07800 1597809 .. 1597835 + -12.2  -3.05384   GCGCAGCGCCGCCAC         CTCGGCGTCGCC CGG GGCGGCGTCGAA         TTCGGTGAGGCCGGC  66 492
CXD81_RS07810 1600086 .. 1600102 +  -6.5   -4.8083   AACTTGCGGCCGCGC              TGTCGGC CAC GCTGGCA              TTTTTCGTGCTGTTG  82 139
        rdgB 1604229 .. 1604239 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS07830 NONE
CXD81_RS07835 1606593 .. 1606615 +  -7.6  -4.16842   CCAGGAGTGCGGGAC           CTGGCACGCA TTT TGCTTGCCTG           TTTATTGCCAGTCGG  74 133
        glnA 1608085 .. 1608137 + -22.1  -3.11634   ACTACAGCCTGTAAT CCGGGAGGCTGTGCGGCG-GCGGGCC TCGC GGCCCGCCCGCCGCGC--CGTCCCGG TTGCCTCCTATGACG 100 27
CXD81_RS07845 NONE
        ntrC NONE
CXD81_RS07860 1612521 .. 1612543 + -11.9  -4.56597   TGCCGTAAAGTGAGA           CGGGCGCCG CCAGC CGGCGCCCA           TTTTTCCACGGCGCG 100 33
CXD81_RS07865 1613685 .. 1613719 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 214
CXD81_RS07890 1619328 .. 1619341 +  -9.5  -5.27335   CGCCGCCAGGAAAAG               CCGCC TTCG GGCGG                TTTTTCTTTGGCCGC 100 48
        dkgB 1622822 .. 1622839 +  -2.6  -3.65351   GAGGGGTGGGCGTAT             TGCTGG ACAAGA CCGGCG              TTTCGCTGACGCTGG  51 478
CXD81_RS07915 NONE
        recG NONE
CXD81_RS07925 1628593 .. 1628619 +  -9.4  -3.14132   GGCCGGCGTGGCGAA        GCCC-GGCCGG AAATGC TCGGCCAGGGC         TTGCTCGACCACGCG  59 58
        mmsA 1631131 .. 1631160 + -18.6  -2.67316   GTTCGGGCTGAGCGC       GCGCCGGCGCGGC CGGGC GCCGCGCCGG-GC       TGCCTTGTTGCGTTC  87 30
CXD81_RS07940 1631747 .. 1631768 + -15.9   -5.4505   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 47
CXD81_RS07965 NONE
CXD81_RS07970 NONE
CXD81_RS07975 NONE
CXD81_RS07980 NONE
CXD81_RS07985 NONE
CXD81_RS07990 NONE
        tviB NONE
        tviC 1647071 .. 1647121 +  -2.7  -3.07816   GCCGCCATGCCCTGG TACACGCAATTCCTG-CG-ATGA TCGAGCT TCATTCGTCAGGCATCGCGCGTA TTCCGTACCTGACGG  42 5
CXD81_RS08005 1649156 .. 1649174 +  -5.2  -3.13403   GATGAGCCGGAGCAT             GGCATGAG CGC CTCGTTCC             TGTTCCTGCAGGGCG  49 36
CXD81_RS08010 1650352 .. 1650362 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD81_RS08015 NONE
CXD81_RS08020 NONE
CXD81_RS08025 1653913 .. 1653947 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS08090 NONE
CXD81_RS08095 1667301 .. 1667337 + -11.4  -3.01712   TATGCGCCCGATGCC    GTCGTGCGGGCGCTGG ACGCG CCGGCGCTGGCGCGCC    TGTTCGCGGCCAGCG  65 427
CXD81_RS08105 NONE
CXD81_RS08110 NONE
CXD81_RS08115 NONE
CXD81_RS08120 NONE
CXD81_RS08125 1673950 .. 1673976 + -22.3  -3.05384   GGCAAGTAGGCGCGG         GCGGGCGCGGG CGGGC CCCGCGCCCGC         TTGCGTCGCGCACGC 100 32
CXD81_RS08140 1676664 .. 1676711 +  -5.4  -2.73468   ACGGCGATGACCGCG TGCGCGGGCTC-CAGCCGGGT GCTCACG GTCAGGCGGCGCGCTCGCGCA TGCTTGAGGATATTG  43 191
CXD81_RS08155 1682479 .. 1682499 +  -8.2  -3.34895   CGATGGCGGCATCTT            GCCTTGGC GAATG GCCACGGC            TTGCTTCAGGCTGGC  59 267
CXD81_RS08175 1684605 .. 1684643 + -10.1  -3.65351   GAACCGGTCTGAGCG  CCGGGGCGGCGGCG-CCC GCAT GGACCGCCGCCGTCGCGA   TTTCCATGACGGTGC  67 29
CXD81_RS08205 NONE
CXD81_RS08210 1691309 .. 1691350 +  -3.7  -2.71791   CTCGACATCAACGGC GG-CGCCGTGATGCTC-TG ACACGC CATGCGCATCGCAGCGGCC ATTTGCACCAAAACT  41 8
CXD81_RS08215 1692728 .. 1692742 + -12.8  -4.15044   GTCGCACTGCGCCAG               CCGGGC GTA GCCCGG               TTTCTTCAGGCGCGC  86 383
CXD81_RS08225 1694672 .. 1694687 +  -5.4  -3.67597   CAGTCGGTGCCGGCC              GG-CCTG CCG CAGGGCC              TTGTTCCCTGGGAGC  57 286
CXD81_RS08235 1696407 .. 1696441 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS08275 NONE
CXD81_RS08280 1703970 .. 1703982 +  -4.8  -3.01712   CAGTACGATATCGTG                CTGG CGCGC CCAG                TCTTCCACCCCCGCG  46 363
CXD81_RS08290 1704992 .. 1705002 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS08295 1706479 .. 1706534 + -11.7  -4.07568   CCAGCGTATAGCCGT CCGGGGTGGCCTTGGCCAGCGCG-TCG GCGC CGATCGCGCCG-CCGCCGCCGCCGCGG TTTTCCACCACGACC  82 498
CXD81_RS08305 1710091 .. 1710104 +  -2.3  -3.01918   CGCAAACCGGGAGTC               CTGCC TGAT GGAAG                TCGTTTATGCCCTGG  41 18
CXD81_RS08310 NONE
CXD81_RS08315 NONE
CXD81_RS08320 NONE
CXD81_RS08325 NONE
CXD81_RS08330 1713239 .. 1713249 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 117
CXD81_RS08335 1714286 .. 1714311 +  -8.2  -2.70932   TATGGTAGAAAGGTC         AGCGGCAGGCC ATGAC GGCC-GCCGCC         TACTTCAAGGAGCGA  52 58
CXD81_RS08340 1714904 .. 1714919 +  -4.6  -2.84454   CGCATTCAGGCAAAA              TGTCGG CTGT CCGACC               CTTTAAGTCCTTTAT  44 90
CXD81_RS08345 NONE
        tadA NONE
CXD81_RS08355 1717284 .. 1717330 +    -7  -4.56597   AGCACACCCACTGAA CGCAGGCCCCGCTACGTGTCCT GCC GGGGCACCCAGGCGGGCTGGCG TTTTTCCAGGAAAGA  77 27
CXD81_RS08380 1723896 .. 1723939 + -12.2  -3.28924   GGCATCGAGGCGTAA GCGGGGCGCCCGC-GCGCGGC CTG GCCGCGCCGCCCGCGGCATGC TTATAACGACAGGTA  71 26
CXD81_RS08385 1724859 .. 1724882 + -17.4  -2.61695   TCATACCGATACCGT          GTCGCGGGCC CGCC GGCCCGCGGC           CTATTTGCCGATCCC  80 57
CXD81_RS08390 NONE
CXD81_RS08395 1726685 .. 1726707 + -11.9  -3.15544   AATACGTCTGAACCA           CGCGCGGGC CTGGC GCCCGCGCC           TTCATCGCCATGACC  66 30
CXD81_RS08405 1729054 .. 1729082 +  -2.9  -3.59738   GCCTTGGCGCGCATG        GCGTCCTTGACCG AGT CGGACAGGCGGGC        TTTGAGCGTATCGTG  50 464
CXD81_RS08415 NONE
CXD81_RS08420 1730951 .. 1730988 + -11.4  -2.67021   GTAGGTCCGGCCGCG  CCGG-CGGCGGCC--AACC TTA GGTTATGGCCGCTGTCCGG  ATTGCTATTTGGCGC  61 37
CXD81_RS08425 1732570 .. 1732580 +  -8.2  -3.06796   GCATCCAGCAGTTCG                 CGGC GCT GCCG                 TTCGATCAGCTCGGG  55 248
        mltG NONE
CXD81_RS08450 1738981 .. 1739000 +  -2.8  -3.16564   GAGCTGGTGGCGCAA            GCGGCATGA GCC TCG-GTCGC            TTCCTGCCCTGGCAG  44 17
        holB 1740043 .. 1740056 +  -9.5  -4.03078   CCTGCCAGTGACGAT               CGGGC CACG GCCCG                TTTCTCCTGTGATCC  75 30
CXD81_RS08460 NONE
CXD81_RS08465 1741814 .. 1741833 +   -15  -5.52384   CTCCACCTGATCACG            TGCCGCCC ACCG GGGCGGCA             TTTTTTTGCTCGGGG 100 94
CXD81_RS08470 1742695 .. 1742712 +  -5.6  -4.67982   GATGTATCCCTGTGG             CCGTAT CCATCC ATACGG              TTTTCTTCACTCCAA  77 39
CXD81_RS08475 1743663 .. 1743678 +  -2.5  -3.90744   CATCTACAACCTGTG              CAGCG TATACC TGCTG               TTCTTTCGCGGCACG  56 189
CXD81_RS08485 1745009 .. 1745065 +  -7.3  -3.65902   GATACGCGCCGCCTG GCCCA-CATCGT--CG-CGCTGGGGCAGG ACG CCGGCGCCGGCGACGCCGCGGTGCTGGGC TTTGCCTGCGATGCC  61 100
CXD81_RS08495 1747404 .. 1747432 + -19.6  -3.04398   CGCATCGGCGTACCA       GGCAGCCGGCCCC GCAA GGGGCCGGC-GCC        GTTTTCAGCGCAGGC 100 68
CXD81_RS08575 NONE
CXD81_RS08580 1763045 .. 1763061 +  -2.9  -3.71645   TTGTATCCTATGGCT              TGGATGG CAT CGGTCCA              TTTCAATATGACGTT  53 98
CXD81_RS08585 1764129 .. 1764153 +  -6.3  -5.24129   GGCCGTCGATTTCGG          GTGAGGGGCCA GCC TGGCCTTGCGC          TTTTTTCTCCAGCGC  93 173
CXD81_RS08600 1779600 .. 1779623 +    -3  -3.40403   GCGGCCTGCCGCCGG          CTCGGCGCAT GGGG ATTCGCAGGG           TTCTCATGCGCCGGC  48 47
CXD81_RS08605 1780151 .. 1780161 +  -3.2  -4.45261   ATGGTCGGCTTGTCA                 CGAG ATT CTTG                 TTTTCCATTTCTTTC  69 85
CXD81_RS08610 NONE
CXD81_RS08615 1783757 .. 1783788 +    -3   -3.9941   GAGCCAGATATTCGC     TGAC-CGC-CGGGC CGCCGT GCCCGCGCGCGTAA      TTTCCTTCTGCGGGG  58 23
CXD81_RS08620 NONE
CXD81_RS08625 1786638 .. 1786653 +  -4.6  -2.78384   GCGAGAACGCGGCCG              CGACGC TACA GCGTCA               TGTGCTGCGGCAGCC  43 46
CXD81_RS08670 1794867 .. 1794895 + -14.6   -3.6106   AATCCATCATGCATC       GGCGCGCG-CCCGC TGG GCGGGGCGCG-GCC       TTTCCCCCTGTTACG  81 40
CXD81_RS08675 1798592 .. 1798649 + -16.2  -2.71712   CGGGCACACCGTCAC GCGC-AAGGCGGGCTGGTCGCGCCGGT CATGC ACCTGCAGGGTCAGCCCGCCATCGCGC ATTTCGAACAAGGCG  77 63
CXD81_RS08690 1801764 .. 1801810 +  -8.6  -4.18018   CCACGCCCAGCGCGC CGCGCAC-CGCGTGGTTGCCC ACCACC GAGTAGCCGCGCGCGCGCGTG TTTTCGATCAGGCGG  75 197
CXD81_RS08700 1803546 .. 1803563 + -12.7  -4.19735   CTCGAGCGTGAAGAA             GACGCCC GCGA GGGCGTC              TTTGCTTTTGGAGCC  91 53
CXD81_RS08710 1805462 .. 1805475 +  -9.5  -2.81966   GGATGCGCGGCCGCG               CGCCG TCAC CGGCG                TGTCATGGCATTTCC  56 85
CXD81_RS08715 NONE
CXD81_RS08720 1808007 .. 1808032 + -19.1  -4.56597   TACGCCAAATGAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 29
CXD81_RS08740 NONE
CXD81_RS08745 NONE
CXD81_RS08750 1813702 .. 1813712 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
        tilS 1815868 .. 1815890 +    -9  -3.28924   AAAATACTCAGCTTT           GCCCGCCCAG ACC CTATGCGGGC           TTGTCAGCCAGAGTA  61 83
CXD81_RS08765 NONE
CXD81_RS08770 1817364 .. 1817385 + -14.5  -5.45802   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 37
CXD81_RS08780 NONE
CXD81_RS08785 NONE
CXD81_RS08790 NONE
CXD81_RS08795 NONE
CXD81_RS08800 NONE
CXD81_RS08805 NONE
CXD81_RS08810 NONE
CXD81_RS08815 NONE
CXD81_RS08820 NONE
CXD81_RS08825 1827106 .. 1827116 +  -2.4  -2.66316   TTCATTGAGCGTGGA                 CACC GAC GGGG                 TGATGTCGTGCACCA  38 477
CXD81_RS08835 1829231 .. 1829273 +  -8.2  -3.25073   CACAGCGGCGGCTAT CCCGCGCGCCAGGCGCTCG AACAGG CG-GCGCCCGGCCGGCCGG TGTTCCTGTTGCGCC  58 408
CXD81_RS08845 1831308 .. 1831330 + -10.6  -2.70932   TCGCTGTTCGGTGCG           CCATGAGCGT GCG ACCCTCATGG           TGGTTCGCCGCGGCG  60 20
CXD81_RS08850 NONE
CXD81_RS08855 1833221 .. 1833237 +  -5.1  -4.12198   TCCCTTACAGGCGGG              CAGGC CGGCGGC GCCTG              TTTTACAACCTTGTA  64 45
CXD81_RS08860 1833417 .. 1833444 + -18.6  -5.04385   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC 100 83
CXD81_RS08905 NONE
CXD81_RS08910 1842077 .. 1842097 +  -4.5  -3.19157   TTGCCGCTGCATGGG            CGGCCCGCT CCA GGCGGCCAG            TTCGTCCGCTTCGTC  47 99
CXD81_RS08935 1848413 .. 1848426 +  -9.5  -3.53091   CCTGTATCGCCGCAC               CCGCC GCCG GGCGG                TTTGAAAAGCCGGCT  64 7
CXD81_RS08940 1848569 .. 1848593 + -17.2  -4.98531   GCGCCAATATGAAAA          GCCGCCATGC CTTGT GCATGGCGGC          TTTTTGCTTTGGGCG 100 35
CXD81_RS08945 1849279 .. 1849298 +    -5  -4.20696   AAAATACTAGGCGAA            TTAAAGCG TCAA CGCTCTAA             TTTTCGGCTTGGTCG  66 43
CXD81_RS08950 NONE
CXD81_RS08955 1851920 .. 1851945 +  -3.3  -3.61517   TGCGGCTACCGCCGC        TGGC-G-CGCC TGAACC GGCGACGGCCA         TTATTCGCGCGAAAT  49 82
CXD81_RS08960 NONE
CXD81_RS08965 1855079 .. 1855093 +  -3.4  -3.96051   GCGCGGCATCATCAA               CGAGGC TAC GCCATG               TTTCATCTGTTCTGT  58 131
CXD81_RS08970 1856125 .. 1856153 + -15.2  -3.53012   GGGCGCAACCATCCC        GCTTGCCCGGCC CCGGC GGCCGGGCGCGC        TTTCCGGAGCAGGCG  81 41
CXD81_RS08975 NONE
CXD81_RS08980 1858225 .. 1858273 + -18.2  -2.90075   GGTGCTGGCCGAGGT CGTGC-CCTAGGGTGCCTGTCCC TGCG GGGACAGGCACCCTTGCCGCAGG TGTCGTTCCCCGGGC  86 16
CXD81_RS09010 1866953 .. 1866981 + -10.1  -3.06915   CAGAACGTTCAGGCC        GCGGGCGCGCCGC ATG GCGGCGTGGTGGC        TTCGGTCGCCTACCT  60 125
CXD81_RS09015 NONE
CXD81_RS09020 1868450 .. 1868469 +  -4.2    -3.889   ATACGGGCATCCCGG            GGTATGGCG GCT CGCCG-GCC            TTTGCTATCCTTGCG  57 62
CXD81_RS09025 NONE
CXD81_RS09030 NONE
CXD81_RS09035 NONE
CXD81_RS09040 1874861 .. 1874915 + -15.7  -2.71364   GGGGCGGAGAACGAG TAGGCGG-GGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCGTGCCAACCGTCAA TCGTTGACGAAGTCC  75 23
CXD81_RS09050 1876514 .. 1876525 +  -7.2  -4.59773   TCTATATCCAGCATG                GCGG CGCT CCGC                 TTTTTCGGGCTCAAG  79 84
CXD81_RS09070 NONE
CXD81_RS09075 NONE
CXD81_RS09080 NONE
CXD81_RS09085 1882603 .. 1882619 +    -3  -2.78679   CGGGCGAGGGGGCCT              GAGATG CGCGC CATTTC              CTTTCCGTCCCGGCG  40 24
CXD81_RS09090 NONE
        cpaB 1884000 .. 1884014 +  -3.5  -3.01791   GTGCGCGGCGGCGAC               GTGCA GGCAG TGCGC               TATTGACGAACAGCT  44 5
CXD81_RS09100 NONE
CXD81_RS09105 1886804 .. 1886827 + -12.4  -3.16564   CCGCCATCCATGGAA          TTCGGCGCCG CGGG CGGCGGCGAA           TTCATCGCGTCCGAA  69 58
CXD81_RS09115 NONE
CXD81_RS09120 NONE
CXD81_RS09125 NONE
CXD81_RS09135 NONE
CXD81_RS09140 1894951 .. 1894987 +  -4.4  -3.04398   CCGAAACGGCCGATG   GCGTGG-CCGATCCG TAACCGGC CGGGTTGGGCCACGG    GTTTTACGAAACCGC  45 9
CXD81_RS09145 1895791 .. 1895806 +  -3.2  -3.83318   GTATGGCGGGGCGGG              GCATAG GCGG CTACGC               TTGTATTATTGCCGG  56 74
CXD81_RS09150 NONE
CXD81_RS09155 1897151 .. 1897177 + -11.5  -3.65351   GGTCCGGCGCCGGTT        CGCCGGCGCCGC GGCC GCGG-GCCGGCA         TTTCCGTCCAGCTCG  75 105
CXD81_RS09160 1897763 .. 1897775 +  -2.6  -3.29471   GCTGGGCGAGCCCCC                GGTC CCTTC GGCC                TTCGTATCATGAACG  44 1
CXD81_RS09165 1898264 .. 1898283 + -16.4  -3.75629   CCGGGGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG  88 95
CXD81_RS09185 1902576 .. 1902588 +  -7.7  -2.71144   GCCCTCCAGGCCCGT                GACGT CGA ACGTC                TCGTTGCCCACGATG  49 311
CXD81_RS09200 1908533 .. 1908558 +  -4.7  -3.06696   GCAATGCTCGCCTGG         CGCAGGAC-TGG GGT TCACGTCCTGCA         TGTCTTGAAACGCAA  45 133
CXD81_RS09205 1909568 .. 1909602 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 271
CXD81_RS09235 NONE
CXD81_RS09240 1915733 .. 1915752 +  -9.2  -2.72344   GCGCGCATGAACAGC            GGCCTGGC CTGC GCCACGCC             TGCTTCGAAATCGGC  52 243
CXD81_RS09250 1916229 .. 1916247 +  -4.4  -3.66018   GGGTGAACAGGCCAG             CCAGCCGG TGC CCGACTGA             TTCTTCCCATCCTCC  55 7
CXD81_RS09255 NONE
CXD81_RS09260 1918306 .. 1918352 +  -7.2  -3.55444   ACAAAGGGGAGCCAG GCGGCGG-TC-CGCCTGCCGGT CGGAA ATCGGCGAGCGTGTTCCGTCGC TTTACGGAATCGGAG  58 339
CXD81_RS09265 1919064 .. 1919098 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 262
CXD81_RS09285 1922929 .. 1922962 + -15.9  -2.70932   GCGCGCGGCCGCGGC     CGACGTGGCCGGCGC CGGC GCGTCCGCCTCGTCG      TCCTTGAAGCGGCGC  75 93
CXD81_RS09300 1925540 .. 1925596 +  -7.2  -4.64334   GCAAGGCGCGTGCGG CCCT-GTCCACGCGCGGCGGCCCC-CC GCGCAA GGCGGGGCAGCCGC-CGCCAACCAGGG TTTTGTTGCGGCGTT  79 173
CXD81_RS09305 NONE
CXD81_RS09310 NONE
CXD81_RS09315 1928143 .. 1928181 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CXD81_RS09320 1931406 .. 1931416 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf 1931591 .. 1931625 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CXD81_RS09345 1935521 .. 1935543 +  -4.7  -2.70932   TGAACGGCCGATGCT           GCAGCAGCG GGTGG CGCAGCTCC           TCGTTGGCGCGGCGC  43 296
CXD81_RS09390 1943998 .. 1944008 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 180
CXD81_RS09395 1945157 .. 1945196 +  -8.4  -3.60098   AAGCGCCGTGGCAAA  CACAGGAGTCGCCCGCGCG TTG CGCGTGCGCGGC-CATGGG  TTTACGCTAGCGCCT  62 170
CXD81_RS09400 1947454 .. 1947467 +  -5.9  -3.82824   GCAGGTCGGCCAGGA               CGGCG TCGA TGCCG                TTCTTGTCGATCGTG  63 408
CXD81_RS09425 1951681 .. 1951735 + -11.8  -3.84712   CTATTGACAGTTCAC AGCTAGGATGCCGCCGACCCCGGCGC CAT GCGCCGGGGTCGGCCGTCGCAAATCA TTTCATCTCCAATTG  79 20
CXD81_RS09430 1953259 .. 1953271 +  -4.7  -2.71712   GTCGCCGGCCCCGTA                CGCCG GAG CGGCC                CTTTCCCGGGCCGCG  43 145
CXD81_RS09435 NONE
CXD81_RS09440 1955481 .. 1955500 + -11.4  -4.11692   CGATATGATGGAAGA            CGGTCACC AGTG GGTGGCCG             TTTTCCCAATCGCTC  82 78
CXD81_RS09445 1955910 .. 1955925 +    -6  -2.83112   GGCCGCTGAGGCATG              CCGCGG CGAG CGGCGG               TATGATCGATTGCAT  48 32
CXD81_RS09450 1957225 .. 1957252 +  -2.5  -3.08679   CTGCGGCGAGGGGGG        GGCGCAGTGGC TACAAT GCCGCGATGCC         TATTCGCTACACCCC  42 87
CXD81_RS09455 1958082 .. 1958094 +  -3.3  -3.78793   GGCCGCCGCAAAGCA                GGCTA CCA TCGCC                TTATTCATAATTATG  56 89
CXD81_RS09460 1958940 .. 1958967 +    -9  -3.01712   GCCGCCGGCGAAAGC        GCCGGCCTGATC GCCC GGCTGGGCCGGC         TGTTCGAGCGAGACA  57 69
CXD81_RS09465 NONE
CXD81_RS09470 1961411 .. 1961440 +  -8.5  -2.62983   AGCGCTTCAGGACGG       TGGCGCGCAAGGCC GAC GACCTGGC-CGCCA       TCCTGTACACGTCCG  52 485
CXD81_RS09480 1963695 .. 1963718 + -13.8    -4.015   TGAGGGACGAAAGGG          GAGCGGCGCC GGCC GGCGCGGCTC           TTCTTTCATCGCTGG  84 53
CXD81_RS09485 1964343 .. 1964362 +  -5.6  -3.32343   GTGAAGTAGGGGTTG            C-GCCGTCC CGC GGCCGGCCG            TTCTAGGGATATCCC  51 32
CXD81_RS09490 1965477 .. 1965508 + -20.8  -2.71712   TCAAGTAATCGCGTA      TTCGGCCGGGCGCC GCGC GGCGCCCGGCCGGC       ATTTCCACCGAACAC 100 33
CXD81_RS09500 1967496 .. 1967539 + -10.9  -3.14344   GGTTGCGCGCGGACA GGCGCAGGCCG-G-GGCCGGG CAGG CCCAGCAGCACCGCCTGCGCC TTGATCAAGGCGATG  64 257
CXD81_RS09510 NONE
CXD81_RS09515 NONE
CXD81_RS09520 1970704 .. 1970720 +  -2.1  -4.62069   GCGCGCTTTTACCTC              CGTGAGG AAT CCATGCG              TTTTTCGCCTCAGCG  70 266
CXD81_RS09525 1972049 .. 1972080 +   -15  -4.26076   GCCAGCAGTCCTAAG      CGGCGCGCGGCGCC CGAC GGCGCCGCGTTCCC       TTTTCGTGAGCATCG  95 27
CXD81_RS09530 1975546 .. 1975577 +  -6.5  -3.61398   TGGCGCCGCAGGGCG      C-CACGCCGGCCGA CGAGA TCGGCTGGTGCGAG      TTCTTCCGCGACGCG  56 227
CXD81_RS09540 1977583 .. 1977601 + -11.6  -2.56271   GCGGCCACGCCTGAA             GCAGGGCG GGG CGCCCGGC             GTATTATCATCACGA  61 27
CXD81_RS09545 NONE
CXD81_RS09550 NONE
        uvrC NONE
        pgsA 1981713 .. 1981723 +  -8.2  -3.85698   GTGGCGGGCTGGTTC                 GCGG CCG CCGC                 TTTCTGGAGACCGCG  68 111
        aceA 1985516 .. 1985554 + -13.7  -2.90392   TCAAGGCGGCGTGAT  CGGGC-GGCGCCCGCCCC GCAT GGGGCCGGCGCCAGCAAG   TGTAGTTGCAGGGTG  71 27
CXD81_RS09580 NONE
CXD81_RS09585 1986978 .. 1986994 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD81_RS09610 NONE
CXD81_RS09615 NONE
CXD81_RS09620 NONE
CXD81_RS09625 1994090 .. 1994103 +  -2.4  -4.25658   CACGACGGGAACGCC               TCGT ATGACA ACGA                TTATTTTCATCGCCT  62 43
CXD81_RS09630 NONE
CXD81_RS09635 1995649 .. 1995664 +  -6.1  -3.20382   CGTCGATCGACTCCT              GCGCT TCGGCC AGCGC               TTCGTAGATCTGGAA  50 100
CXD81_RS09665 NONE
CXD81_RS09670 2005195 .. 2005205 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS09675 NONE
CXD81_RS09680 NONE
CXD81_RS09685 2007798 .. 2007816 +  -6.8  -3.28712   ATGCCTAAGCCATAA             GATGTATT ATA GATACATC             TTATAAACCGCAGGA  54 442
CXD81_RS09695 NONE
CXD81_RS09700 NONE
CXD81_RS09705 2009941 .. 2009957 +  -2.1  -3.08046   CCCAAATCTGCGAAA              ATCCGCC GTT GGCCGAA              CTTTTGCAGTGAGAA  42 60
         xth NONE
CXD81_RS09715 2012362 .. 2012373 +  -2.2  -2.90571   CCGCTACCAAAACGG                C-CGG AAT CCGTG                TATAGTTGCGGACTT  40 82
CXD81_RS09720 2012485 .. 2012512 + -12.8  -5.63517   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC 100 42
CXD81_RS09755 2018773 .. 2018800 + -18.4  -2.50443   CAGACGCCTCCCGGC        CAGGCGCGCGCA CGCC TGCGCGCGCCCG         CTTCCTGCCCTCTCC  87 406
CXD81_RS09775 2023013 .. 2023031 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 249
CXD81_RS09805 2028510 .. 2028520 +  -2.4  -2.71461   AGCAATCGGCATTGC                 CGCC ACG GGCC                 TCGGTTTCCTATTCT  38 101
CXD81_RS09810 NONE
CXD81_RS09815 NONE
CXD81_RS09820 NONE
CXD81_RS09825 2033734 .. 2033780 + -17.2  -3.56821   CAGCGGCGCAGGCCC GTCGCCGCC-GGCCGGCGCGG CGTCCC CTTCGCCGGCCTGGCGCCGGC TTTCCAGGATCTCCT  93 418
CXD81_RS09840 NONE
CXD81_RS09845 NONE
CXD81_RS09850 2037324 .. 2037358 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 213
CXD81_RS09870 2039758 .. 2039768 +  -2.4  -2.71712   CCGCTTGCCGGGATA                 CTGG GGG CCCG                 CTTTCGCCCGCGAGA  38 75
CXD81_RS09875 NONE
CXD81_RS09880 2042785 .. 2042816 +  -6.4  -3.23216   CAGACGCGATTGACG      CGCGCC-GCCTCGGG CCC CTGGTGGCCGGTGCG      TTCGTGCTCGTGCGG  50 480
CXD81_RS09890 2043983 .. 2044040 + -21.1  -2.83403   GTTTAATAGCAACAT CCTTCGTCCTTCGAACCGCCGCCCGGC CCAT GCCGGGCGGCGGCCCGGGCGATGGCGG CTTTCCTGGCGGCGC 100 102
CXD81_RS09895 2044815 .. 2044841 +   -10   -3.5393   CCAACCGCGATCTGG         TGGCCGCCCTGC TCA GTTGAGCGGCCA         TTTGCGCCGGATCAT  67 6
CXD81_RS09900 2047063 .. 2047083 +  -5.3  -3.57144   CGATGGGCCCGGGCA            GCAGCCGCT CGA AGCGGATAC            TTTGCGCGTCCAGGC  54 514
CXD81_RS09915 2048474 .. 2048525 + -11.6  -3.14931   CGCGCCCGGCTCAGT C-GGCCGGCG-CGCGCCGCACCG-CG GCGT CGACGATGCG-CTCGGCGCCGGCCAG TTGCTGCGCCATCCC  66 41
CXD81_RS09925 2049366 .. 2049397 + -24.6  -2.82759   TACGGAAGGATTCGG      CAGGAGCCTGTCCC CGTC GGGACAGGCTCCTG       TGTCATAGGTATCTT 100 121
CXD81_RS09935 2051194 .. 2051212 + -10.2  -3.01712   AGGTCGTAGCGCATC             GCCGCCAG GCG CTCGCGGC             TGTTCAGCGGCAGGA  59 358
CXD81_RS09945 2053182 .. 2053197 + -10.4  -2.78384   GCCAGCTCGGGGTCG              TCGCGC AGCC GCGCGA               TATAGTCGGCCACCC  56 498
CXD81_RS09960 2055748 .. 2055770 + -11.3  -2.70932   TGGCGCTGTAGCTCA           CCAGCAGGC ACTTG GTCTGCTGG           TAATTCGACAGCGCC  59 148
CXD81_RS09970 2059522 .. 2059556 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
CXD81_RS10015 2067492 .. 2067526 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS10025 2069390 .. 2069417 +  -5.5  -3.66058   CGCCGCGCCCGCCGC        CGC-CGTGGCGC AACCC GCGCCATGAGCA        TTCTCTATCTGCTGT  57 1
        ccoS 2069937 .. 2069960 +  -7.4  -3.28924   TCGTATTACGTGGTG          CAG-CGCACCT GTC AGGCGCGGCTG          TTCTGCGACAAGCTG  56 408
        ccoO NONE
CXD81_RS10045 NONE
        ccoP NONE
        ccoG NONE
CXD81_RS10060 2074747 .. 2074796 +  -2.6  -3.11812   TCGAGCGCGTCGCCG CGCCGGC-CGCCGACGCGCGTCGC TGAA GCGGAGC-CGACCATGCGCTGGCG TTCGCTGATGTGGAT  42 0
CXD81_RS10065 2075015 .. 2075032 +  -3.3   -3.6761   GCGGCCAGGACGAGA             CGCCGTT CTGA AGCGCCG              TGTTTGTTGCGACGC  53 15
CXD81_RS10070 NONE
CXD81_RS10075 NONE
CXD81_RS10080 NONE
CXD81_RS10085 2078628 .. 2078655 +  -6.2  -3.01712   GGCCCGGATGGTGGC        GGCCGTC-AGCTG CGC CAGCGCGACGCCC        TGTTCGGGCCCGGCG  48 476
CXD81_RS10095 NONE
CXD81_RS10100 2080407 .. 2080446 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD81_RS10105 2081813 .. 2081837 +  -4.9  -3.77087   AGAGCCGACTTGTAA          TCGGCCTCG GTGCGTA CGGGGCGGA          TTTCCATGTTCACTC  58 361
CXD81_RS10115 2082892 .. 2082909 +  -8.3  -3.67954   GGCGCGGCTGGGGTG             GCGCAGC TTGC GCAGCGC              TTTGGCCTCTATTTG  67 483
CXD81_RS10130 2085890 .. 2085907 +  -8.3  -3.63968   CGCCTCGTCGGTCGC             CAGGCCG CTTT CGGCCAG              TTTCGCCATTTCGGC  63 129
CXD81_RS10225 2107701 .. 2107719 + -17.4  -3.15544   TCTGAACGCAAGGGC             CCCCCGGC GCG GCCGGGGG             TTCCTGCCCATGGCA  84 36
CXD81_RS10240 2110688 .. 2110698 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS10245 2111681 .. 2111720 +  -9.4   -3.5361   CCTGGGCGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD81_RS10255 NONE
CXD81_RS10260 NONE
CXD81_RS10265 2114511 .. 2114533 + -11.2  -3.57144   CGACGCGCTGGCCGC           GCTGGCGCGC CGC GCGCCCTAGC           TTTCGCGCTCGCCCG  70 4
CXD81_RS10285 2117264 .. 2117283 + -16.4  -3.90112   TCGCGCCAAGACAAA            CGGCCCGC TTGC GCGGGCCG             TTTGCTTGCCGGCAG  93 53
CXD81_RS10375 NONE
CXD81_RS10380 2138116 .. 2138134 + -17.4  -3.10522   GTACGCCAAAAAAAA             CCCGGGCC AGC GGCCCGGG             TCTGTTGCGTCGCCT  84 135
CXD81_RS10435 2149973 .. 2149983 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 86
CXD81_RS10440 2151341 .. 2151356 +    -6  -2.50699   CAGGTCGAAATGCTC              GGCGGC AAAC GCCACC               ATATCTTCCTTGAGC  44 379
CXD81_RS10500 2161864 .. 2161892 + -19.7  -4.15508   GGCACGGCCGGCATC        GAGAAGCGGAGCC CAT GGCTCCGCTTTTC        TTTTGCGGCTTGCTT 100 45
        lexA 2162673 .. 2162687 + -12.8  -4.74103   CTACGCGGGCTTGCT               GCCCCC CGA GGGGGC               TTTTTGCCTTGGGGC 100 75
CXD81_RS10590 2177382 .. 2177406 + -22.9  -4.11692   GATAGCCGAAAAAAA          CCGGGCCCGGA TGA TCCGGGCCCGG          TTTTGCGGGTCGCTG 100 91
CXD81_RS10615 2184234 .. 2184259 + -14.7  -5.14563   GGCGCGCAACAAAAA         GCCCCACTGCC GCGA GGCAATGGGGC          TTTTTTCATGCGGCC 100 45
CXD81_RS10650 2188763 .. 2188799 +   -21  -4.59773   TTCGCGTGCGCAGTC    GAACTGCCGCCATCCC CACAA GGGATGACGGCAGTTC    TTTTTACGGATGGGG 100 70
        dapD NONE
CXD81_RS10670 NONE
CXD81_RS10675 2193148 .. 2193158 +  -4.6  -2.64912   GCGAACAATTGAACA                 CGTG ATA CGCG                 CTTCTGGCTTGACCC  42 21
CXD81_RS10680 2195123 .. 2195133 +  -2.4  -3.58365   GCGCAGCGTAAAACC                 AGCG AGA CGCA                 TTATCTCCTATACTC  48 74
CXD81_RS10685 2198509 .. 2198523 +  -7.1  -3.53012   TGCGGCTTTGCGCCA               GGCTG AGATA CAGCC               TTTCCCGGGCCCGGG  58 488
CXD81_RS10700 2202406 .. 2202440 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS10715 NONE
CXD81_RS10720 NONE
CXD81_RS10725 2209744 .. 2209759 +    -6  -4.08945   CACCACTTTGACAGG              CGGCGC CGCC GCGCCC               TTTTCCCGCCATGCT  66 104
       coaBC 2211144 .. 2211196 +  -9.2  -3.53174   CCTCGATCAGCGAAT GCGACAGCGACAGCCAGGCCAGCGC CAGAAA GCGC-GGCCGGGCT-TC-CAGTTGC TGTTTCTCCGCCTCT  61 191
CXD81_RS10740 2212528 .. 2212550 +  -6.8  -2.84298   AGGACGAGCCCGTGG           TCGCCGTGCC CGC GGCGCCGCGC           TAGTTGTGAACTGTC  50 0
CXD81_RS10770 2217672 .. 2217688 +  -2.1  -3.61398   AGCAAGGTATGGCCG              GCCAGCC GGC GGATGTC              TTCTTCACCGCGCAA  50 223
        cphA 2223179 .. 2223199 + -15.4  -3.61398   TTCGCCCCTCTTGCC            GCGCCGCC CGAAC GGCGGCGC            TTCTTCGACGACAGG  83 50
        cphA 2225857 .. 2225874 + -14.1  -5.28176   CTCAAATGTAACTTG             GGCCGGC GCAA GCCGGCC              TTTTTTCTCCCTGCG 100 84
CXD81_RS10795 NONE
CXD81_RS10800 NONE
CXD81_RS10805 2226901 .. 2226922 + -15.9  -5.86965   CGCCGTACGTGTACC           GCCTTCGGG TTCG CCCGAAGGC            TTTTTTTTGGTGCCT 100 73
CXD81_RS10835 2230435 .. 2230453 +  -5.9  -3.16564   GCTGGCTCAGCCTGC             GGCCGAC TGAGC GTCGCCC             TTGATGGCCTCGGCG  51 16
CXD81_RS10845 2233358 .. 2233384 +  -5.1   -2.8352   CGAGCTGGCCACCAT        CCGGC-CCGCCGT CTG ACG-CGGAGCCGC        CTTGTTCAGTTACCG  46 10
        rlmJ 2234631 .. 2234673 +  -8.8  -3.28924   CACCACGCCCAGCGC CGCCCGGCGCAGGCCCGGCG CGA CGTCCGGATAGCGCGCGGCG TTCTCGCCGGCGATG  59 407
        cueR 2237490 .. 2237512 +  -8.3  -3.29144   CGGCCGCCTCGGCAA           GGCGCTCGG CCTCC TCGCGCGCC           TTCTGCCGCGCCTGG  58 72
        plsY 2244841 .. 2244869 +  -2.9  -3.86015   CCACCGCGCGCCGAT        GACCGCGAGTTGG TGC CCAAAGCGAGGAC        TTTGTGGGACAGATA  56 162
CXD81_RS10915 2246365 .. 2246392 +  -9.8  -2.52464   GGCGCGGATGGCCTT        GGCCGCCAGC ACCTCGAC GATGGCGGCC         TGCGTTGCCGCCGCC  55 402
CXD81_RS10925 2248577 .. 2248607 + -18.3  -3.58343   CGCGCGCCTCGCCCC       GCAAGCAGGCCGC CTCGC GCGGCCTGCCTGC       TTTCGAGGTCGTCAA  90 49
CXD81_RS10935 2250417 .. 2250432 +  -4.6  -3.64703   AATTCCAGTTGCGCG              CCGTCG GCGT CGAAGG               TTTCGCTGCGCACGC  54 146
CXD81_RS10960 NONE
CXD81_RS10965 NONE
CXD81_RS10970 NONE
CXD81_RS10975 2259550 .. 2259560 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS10980 2260741 .. 2260755 +  -8.5  -3.35813   TGCCTGGAATAAGGG               GCCGC TCGGC GCGGC               TTCGTTAACCTCGAC  59 202
CXD81_RS11005 2266169 .. 2266182 +  -8.1  -3.06261   CGACCTGCGCCGCCA               GCTCG GCTT CGAGC                TGTTCCGCGTTCGCG  52 279
CXD81_RS11015 NONE
         alr NONE
CXD81_RS11030 NONE
CXD81_RS11035 2273942 .. 2273957 +    -6  -3.53811   CGCAGCATGCGGTCC              GCGGCG GTCT CGCCGG               TTTCCACCACGTAAC  56 158
CXD81_RS11050 2276083 .. 2276116 +  -2.3  -3.60792   GTAGTCCCCATACGT     CGCGTCGTAAGTTTT ACGG AAGACGTTCAGCGCG      TTGTATCTGAATGCT  48 37
CXD81_RS11055 2277271 .. 2277281 +  -2.4  -4.07568   CACCACCGCCAGCGT                 GCTG ATG CTGC                 TTTTCCGAACCCGGG  58 448
CXD81_RS11165 NONE
        sycN NONE
CXD81_RS11175 NONE
CXD81_RS11180 NONE
CXD81_RS11185 NONE
CXD81_RS11190 NONE
CXD81_RS11195 NONE
CXD81_RS11200 2298883 .. 2298904 + -12.9  -3.01712   TCGCCGCCGACCTAG           ACGCCGCGC GTCA GCGCGGCGA            TATTCGGGGCCGAGG  70 65
CXD81_RS11210 2301114 .. 2301126 +  -4.1  -3.55444   AGGCGGTCGCCCGAG                TCGAG GTC TTCGA                TTTCCACGGTCGCGC  51 511
CXD81_RS11220 2304165 .. 2304205 +  -3.2  -3.28712   CGTAGCGGTCCAGGT CCT-GTCCG-GTCATGGCGG CGA CCGCCTTCACGTGGCCCAGG TTCTCGGCCACCAGG  47 523
CXD81_RS11230 2305452 .. 2305476 + -11.4  -3.14344   TGGCGCAGCGGCTGG         CGGCGCG-CTG AAGC CGGCCGCGCCG          TTGATGGCGCGCATC  66 15
CXD81_RS11235 2307051 .. 2307085 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS11270 NONE
CXD81_RS11275 2315171 .. 2315187 + -15.1  -3.05384   GGCTGCGCCGAGACG              GCCGGCG TGG CGCCGGC              TTCGGTCGGCAGGCC  74 475
        htpX 2317555 .. 2317574 + -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 52
CXD81_RS11305 NONE
CXD81_RS11310 NONE
CXD81_RS11320 NONE
CXD81_RS11325 2325794 .. 2325849 +  -5.5  -2.82623   GGTTGGACGCCACCA CCACATCGAACCAGTCCGGGTGCTGCAC GAA GTGC-GCGCACAGGATG-T-CGATGTGG TACTTGTCCCAGCGC  44 400
CXD81_RS11340 NONE
CXD81_RS11345 NONE
CXD81_RS11350 NONE
CXD81_RS11355 2333916 .. 2333950 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        gabT NONE
CXD81_RS11370 NONE
CXD81_RS11375 NONE
CXD81_RS11380 NONE
CXD81_RS11385 NONE
CXD81_RS11390 2341258 .. 2341314 +  -3.7  -3.53012   GGCGCGTCACCATGC CGGTGAC-CGGCTCGCCGCGCAGGA AGGCGCGGA TCTTG-GCCGCCAGCTGCGCCACCG TTTCGCGGCGCAGGC  49 65
CXD81_RS11400 2344141 .. 2344157 +  -2.1  -3.17051   TATCATGCCTATCAG              GCCCGAT TGC ACCGCGC              TGTTGCTGGTGCCGG  43 498
CXD81_RS11415 2347531 .. 2347549 + -17.4  -3.55622   AGCGCAATAACCGTC             CGGGCGGC CAT GCCGCCCG             TTTCCCGGCCTTGCC  89 31
        purD NONE
CXD81_RS11425 NONE
        nadD 2350479 .. 2350491 + -10.5  -3.93489   TCCGCCACATCGACA                CCCGC GCC GCGGG                TTATATTTATCGTTA  77 60
        rsfS NONE
        rlmH NONE
CXD81_RS11445 2352456 .. 2352486 +  -7.5  -2.73364   GATACGGCGCCCGCC      GCGCAGCAACGCGC CCAG GC-CGTGGCTGCGG       TGCTTGGCATCGACC  49 472
CXD81_RS11480 NONE
CXD81_RS11485 NONE
CXD81_RS11490 2363723 .. 2363742 +  -7.8  -3.67597   ATCTAGCGCATCGGG            CCCGGCATG CAG CG-GCCGGG            TTCTTCAATAGCGCC  63 35
CXD81_RS11505 2367047 .. 2367067 + -15.4  -2.57132   CAGGCGCTGGCGCTG            GCCGCCCG ACAGG CGGGCGGC            ATTCTGGCCCACCGG  69 298
CXD81_RS11515 NONE
CXD81_RS11520 NONE
CXD81_RS11525 2370712 .. 2370750 + -19.7  -3.01712   AGCTGACATCCGCGG  C-GAGGTGTGCCTGTCCC CACT GGGACAGGCACACCGCAG   TGTTGACGGGCGCCG 100 84
CXD81_RS11540 2375049 .. 2375088 +    -2  -3.44527   CTCGCGTAGCGGCGC GGGCAGGCT-GCCCGCGG CAGCCA CCA-GGTCGAGCCAGCCC  TTGTCGTAATCGGTG  47 463
        lpxO 2382928 .. 2382963 + -20.4  -2.53015   TGGCACTCTAACCAC    CCGGGTGCCTGTCCCC GCGG GGGGACTGGCACCCGC     TGACTTGGCGCCTGT  95 30
CXD81_RS11580 2388468 .. 2388522 + -13.5  -3.04322   TGGTTTTCATCAAGA AGCTGTAACCAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTAAA-ATGGCC TGTTCGCAACTTACC  70 18
CXD81_RS11585 2388849 .. 2388864 + -11.8  -4.90266   TTCGCCTCATCGCAA              CCGGCC GGCA GGCCGG               TTTTTCATTGATGCC 100 53
CXD81_RS11590 2390852 .. 2390874 + -12.6  -3.61715   TCTCGATGGCTTCTT           CGCCGCGCGC CAG GCGCTCGGTG           TTCTTGACCCCGGTG  74 122
CXD81_RS11615 2396830 .. 2396884 +  -7.2  -3.39327   ATTGAGCGAATCGCC GCCGCGCGCGTAGTACATGTAGAC CACGCCCCC GTC--CATGAACAACGCGCGCCGC TTGTGGGTGTAGCCG  55 480
CXD81_RS11665 NONE
CXD81_RS11670 2406938 .. 2406948 +  -3.2  -2.63631   TCCCTTCGAGCAACC                 TGGG CTA TCCA                 TCATGTCGCAGTTGA  39 53
CXD81_RS11675 2408263 .. 2408273 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS11725 2417617 .. 2417638 + -14.4  -4.07885   CCGGCATTGCCGCCA           CGGGCCCG CGCAGA CGGGCCCG            TTTTGCAGGACCGTC  85 42
CXD81_RS11735 NONE
        acnD NONE
        prpF NONE
CXD81_RS11750 NONE
CXD81_RS11755 2425947 .. 2425960 +  -3.9  -3.53012   TCACGCTGGTTGTCG               TCAAA CCCT TTTGA                TTTCCGCGCCAGCGA  51 12
CXD81_RS11760 2427395 .. 2427406 +  -7.2  -3.28712   AAGCGCCGGCCCGCG                CGCC ACGC GGCG                 TTGTAAAAGCGCCGC  54 39
CXD81_RS11765 2427848 .. 2427866 +  -7.4  -5.75342   AAGCCCCTTTTAAGA             CCCGCT CTAAACC AGCGGG             TTTTTTTTGGCCGGG 100 96
CXD81_RS11775 2429391 .. 2429411 +  -8.3  -3.09492   AATAACCCTTATACG            TCCCCGT TAGGGAT ACGGGGA            TGTTGCAGTTCACGG  56 39
CXD81_RS11780 NONE
CXD81_RS11785 NONE
        hslO NONE
CXD81_RS11795 2433929 .. 2433945 +  -7.9  -2.84325   ACAGGCCGGACTTGT              CCACGCC GAA GGCCTGG              TCGTATTTGCCGGGC  52 449
CXD81_RS11815 2437419 .. 2437452 + -27.5  -3.16742   CGGAAGACAGCGGTT     TCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGA      TTACTGACCATTAAC 100 487
CXD81_RS11910 2457847 .. 2457893 + -16.5  -5.00884   CGGCATGTAAGCGCG GGCGCGCACGTGGGCGCC-GGCA GGA TACCAGGCGCCCTCGCG-GCGCC TTTTTTCCAGACCGT 100 31
CXD81_RS11915 NONE
CXD81_RS11920 NONE
CXD81_RS11925 2460575 .. 2460593 +  -8.8  -3.45849   GATGCCGTCCAGGCC             CGCGGC CAGCCGC GCCGCG             TTGTCGTGGTCTAGC  61 273
CXD81_RS11960 2469167 .. 2469184 + -14.1  -4.41494   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 61
CXD81_RS11970 2470836 .. 2470865 +  -8.5  -3.05596   GACAGTTCACAACTA       GCCGTTCA-GGCCG GCC CGGCCCTGCACCGC       TTCGCTGACCACCTG  55 25
CXD81_RS11990 NONE
CXD81_RS12000 NONE
CXD81_RS12005 2478863 .. 2478890 + -18.4  -2.71924   CATGACCTGAGCCGC        GCGGGCGAGGCC TGAC GGACTCGCCCGC         CTTTCCGGGAGGCTG  87 11
CXD81_RS12010 2479226 .. 2479245 +  -2.7  -3.63266   ATGCGCAACGTACGG            CCCGGCT GAACAG GGCCCGG             TTTCCGATGGATTTT  53 17
CXD81_RS12015 2480068 .. 2480086 + -14.6  -5.78622   CTGCGCAGCGAAAAA             GGCTTGCC AAC GGCAAGCC             TTTTTTTTCGCCTCC 100 50
CXD81_RS12020 2481177 .. 2481199 +  -5.5  -3.83026   AGGCGGCCAACCCAT          GACCCGCACC AGCC GG-GCGGATC           TTTCATGTGCCGCGG  60 24
CXD81_RS12025 2482290 .. 2482300 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 171
CXD81_RS12035 2484500 .. 2484547 +  -7.4  -3.64822   GGTTGGCGATGCCCA CGCCGTGGCCGGCCAGCGCCAG TTGG CAGACGGTGGACGAATACGGCG TTTCGATGGCGGCGT  60 228
         maf NONE
CXD81_RS12140 NONE
CXD81_RS12145 2503469 .. 2503514 + -13.1  -2.71712   TGACGGAGAAGCACC AGGCCG-CGCGCGACATGGTGC TGC GCGCCCTGCCGCGCGGCGGCGG CTTTCGCGAAGACGA  67 217
CXD81_RS12240 2523919 .. 2523975 + -11.5  -3.65812   AGGTCCGGCGCACGC GCCCGGCCTG-AG-GCGGCCGG-ACGCC GCGC GGCTTGCCGCCCGGGCTACTGGCCGGGC TTCTGTTCGGCAGCC  75 15
        mobA NONE
CXD81_RS12305 NONE
        mobB 2537552 .. 2537564 +  -3.3  -4.36914   GGCGGCGCATTGCCG                TCGGC CGC GCCCA                TTTTCTGCCACAGCG  67 162
CXD81_RS12340 NONE
CXD81_RS12345 NONE
CXD81_RS12350 NONE
CXD81_RS12355 2546790 .. 2546814 + -11.3  -3.57792   ACCACCCGCACGCCG          GCCTGCGCCAG CTC CAGCCGCAGGC          TTTCGCAATACGTCG  70 398
         tal 2553070 .. 2553080 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS12385 2554119 .. 2554129 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
        smpB 2562195 .. 2562208 +  -5.9  -2.71364   CGCGATTCCTGATGC               GGTCG CGGC CGGCC                TGCTTGGCCGCGTAC  47 29
CXD81_RS12450 2565622 .. 2565643 +  -8.6  -4.56597   GTTGACGTCGGCGTT           GCGCGCGG CGTTGA CCTCGCGC            TTTTTCAGCACGCCG  83 258
CXD81_RS12460 2566719 .. 2566739 +   -14  -4.77036   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 52
CXD81_RS12470 2570378 .. 2570388 +  -2.4  -3.16492   GCGGCAGCACTGCCT                 CCAG GTC CAGG                 TGTTCGTGGATATGC  43 291
         map 2587266 .. 2587283 +  -5.5  -2.87132   GGCCTTCGTGACACG             GCCGG TCGAAATC CCGGC              TCTCTGACCCCCGCC  46 1
CXD81_RS12560 2590312 .. 2590327 +  -7.5  -3.30124   GTTCACGCCCGAGAT              GGCGC AGGCGC GCGCC               TTCTACCCGCTCACC  56 420
CXD81_RS12570 2591191 .. 2591247 + -31.9  -2.71364   GGCGTTGCGGCGCAA CGCCTGA-CGGC-C-GCGCGGCCGGCTT GCGC AAGCCGGCCGCGCCGCGCCGGTCAGGCG TCGTTGGCCGCGTAG 100 19
CXD81_RS12595 2596218 .. 2596230 +  -3.3  -4.57569   CCTTTACCCGGCCAA                TAGGC GGC GCCAA                TTTTTGACAGAATCG  71 117
CXD81_RS12600 NONE
        fliS 2598065 .. 2598090 +  -3.1  -4.82901   CACCCTGCGCCTGCC         GTTCCGGCCTG AAAC CAGGAAGGCAC          TTTTTGTCCAGCCGC  75 14
CXD81_RS12610 NONE
CXD81_RS12615 NONE
CXD81_RS12620 NONE
CXD81_RS12625 NONE
CXD81_RS12630 2600725 .. 2600774 + -11.4  -3.53444   CGGCCCAGGCGCCAG TTCG-GCCTCGGTG-GCGCCGCCGC TTT GCG-CGGCGCGCACCACGGCGCGCA TTTGCGACAGCATGC  69 276
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 2606539 .. 2606590 +  -4.4  -3.30441   CGCCCTGACGCCTGC GCCGGG-TCC-GGCCGCGCAAGGCGGC CCG GCCGCC--GC-CGGCAAGGGTCCCAGC TTCTCGCAAGTGCTG  49 96
CXD81_RS12670 2608903 .. 2608920 + -10.5  -2.52464   TTTCGCCCTGTTTTT             CGCCTGC CAGC GCGGGCG              TGAATTGCGGCAGAA  56 308
        fliL NONE
        fliM NONE
        fliN 2611061 .. 2611075 +  -5.6  -3.14564   ACCGCTTGAACAGTC               GCCGCT AAA AGCCGC               TTCATGACCGAATCC  49 18
        fliO NONE
CXD81_RS12700 NONE
CXD81_RS12705 2612517 .. 2612532 +  -5.4  -2.78712   TGTCCTGAACGCGCC              TGGCCGC GCC GCG-CCA              TGATTGCGTTCACCA  45 33
        fliR 2613448 .. 2613466 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 153
        flgA 2631717 .. 2631732 +  -5.4  -2.79004   CCCCCATCGGGCCGG              TC-CCGC GCA GCGGAGA              ATATTTTGAAGATCC  45 131
        flgM NONE
CXD81_RS12800 2632594 .. 2632610 +  -9.3  -3.01712   CATCAAGGCCGCGGG              CGCCAGC CGC GCGGGCG              TCTTGCGCGCGCCCG  57 91
CXD81_RS12820 2639587 .. 2639641 +  -7.7  -5.35365   CTGGGGCGCTGGCAA GTAGAAGTCAGCGGGAGCCAGTCCCC GTTC GGGGACAGGCTCCCGG-GTATATTGC TTTTTCTTATGTTTT 100 102
CXD81_RS12825 NONE
CXD81_RS12830 NONE
CXD81_RS12835 2642094 .. 2642104 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS12840 2643232 .. 2643263 +  -5.7  -3.30214   CCGGGGCCTGGATGC      CGGCGCGGGCCGCC TGCCT GG-GGATGGCGCCG      TTGATGTAGTCGATT  52 149
        leuD NONE
CXD81_RS12870 2649931 .. 2649941 +  -8.2  -2.57132   AGCGCCACCAGCGCC                 GGCG CCG CGCC                 CTTGTAGGCCACCGC  51 446
CXD81_RS12900 2656914 .. 2656924 +  -2.4  -3.68351   GCCGATATTGAGGAT                 GGCC AGC GGCG                 TTTCGATCATGGCCC  53 513
CXD81_RS12915 NONE
CXD81_RS12920 2662653 .. 2662685 +  -5.4   -3.4072   GCCGCGTACTCGCCC     TGCAGCCGGGCGCCC AGGC GGGCGGTCAGC-GCG      TTGTCGTCGCGGATG  52 281
CXD81_RS12945 NONE
        clsB 2668959 .. 2669005 +  -9.8  -3.19602   ACACCGCCGGCGCCG CCTGGGCGCCTGGCTGGCCGGC ATC GTCGGCCTGGCCGTCGTCGGGG TATTGCTGTACCAGG  62 60
CXD81_RS12970 NONE
CXD81_RS12975 NONE
CXD81_RS12980 2673157 .. 2673179 +  -8.3  -2.87132   CGCCGCTCGTGAGCC           CCGCGGCGC CCGCC GCGCTGCGC           TATGTGGACGACAGC  54 29
        treS NONE
        glgB NONE
        glgX NONE
        treZ 2686544 .. 2686595 + -10.5  -3.04144   ACCGCCGACACCCTG GCGCGCTGGCGCGCCCGGCCTCC CGCCAT GCTGACCGCGCGCGCCGGCGGGA TGTTGCGCGTGCCCG  60 188
        treY 2690435 .. 2690474 + -15.6  -3.14132   AATGATGCGCAGGGC  CGGCCGCAGCGCCCGCGCG GCC TGCGCCAGCGC-GTGGCCG  TTCATGCCGGGCAGC  78 169
        ptsJ 2696441 .. 2696457 +  -4.3  -3.09908   ACATCAACCAGGCGA              CTTCCCA TAA TGGGGCG              GTTATTTTCCGAACG  47 55
CXD81_RS13045 2697117 .. 2697127 +  -5.4  -3.03798   CTGCCCATCGGCCGG                 GTGA GCC TCAC                 ATTCTTTCTCGCCCT  47 186
CXD81_RS13050 NONE
CXD81_RS13055 NONE
CXD81_RS13060 2699337 .. 2699358 +  -9.4  -3.01712   CCGCACCGCCGCCTG           GGCCGCGCC ATGGC GGC-CGGCC           TGTTCCACCGACAGG  57 396
CXD81_RS13075 2700959 .. 2700981 + -20.6  -5.41746   GCCGCGCCGCGATCG           CAGGGCCGCC TCG GGCGGCCCTG           TTTTTTTGGACGCTT 100 51
CXD81_RS13080 2701794 .. 2701816 + -10.5  -3.34398   GTGACCGCGCCCAAT           TCGACGGCG GCGCG CGCCGGCGA           TGTTTCCGCGCCGCG  63 273
CXD81_RS13085 NONE
CXD81_RS13090 2703299 .. 2703321 +  -3.3  -3.24747   GGCATCGGCCCGCCT           CGCCGGG CCCTGCCCA CCCGGAG           TTCATCATGTCACGC  46 89
CXD81_RS13095 2704245 .. 2704295 +  -5.6  -3.42996   ATGGTGGGCTCGATG CCCGCGTCGCGCAGCAT-TTGCAGCA CGT TGC-GCGACGTGCTGCA--ACGCGGG TTGTGGTAGATGGTG  52 403
CXD81_RS13120 2709132 .. 2709145 +  -2.3  -2.62184   TCCGGGCGCGCGTCC               GCTCG ACCT CAAGC                TGGTCTGACGCGCAC  38 4
CXD81_RS13125 NONE
CXD81_RS13130 NONE
CXD81_RS13135 NONE
CXD81_RS13140 2711293 .. 2711305 +  -2.6  -2.78384   GCGGTGGCCGTGGTC                GTGC AGAGG GCGC                TGTCATGAACCGCAC  38 5
CXD81_RS13145 2712062 .. 2712078 +  -4.4  -3.10641   AAAATTCTCCAGCCC             CGAGTGG ACCG CC-CTCG              TTCCCTGATGCCTTC  47 1
CXD81_RS13150 2712958 .. 2712996 + -10.4  -3.53012   GCGCCGGCGGCGGGC  GCCGCCGAACAACGCGGC GCAAG GCC-CGTTGTTCG-CGCC  TTTGCCGCGCGCCGG  67 41
CXD81_RS13155 2713595 .. 2713607 +  -4.7  -3.02739   TGTCGCCACGGACGC                CGCGC GCG GCCCG                TCTGTATCCGTTCCC  45 82
         psd 2714589 .. 2714645 +  -2.2  -2.74192   TTCGCTTTATCGATA CATGAGGGCTTGCTAGATTGCGGC CTGGCCATC GCCGCCGTTTCTGGAGCTCTCATG TCGTCTTCCGCACTG  38 56
CXD81_RS13165 2716223 .. 2716255 +  -5.6  -4.31837   CGGGTCGTTGGGCAC     GGCGATG--GTCGCGC CCT GCGGGATGGCATCGCC     TTTCTTCAGTTTCTT  69 461
CXD81_RS13185 2718463 .. 2718520 + -12.5   -3.3514   GCCATGCCCGTCGTG CTGGCGCTGACCGCGT-CGCTGGGCGGG CAG CGCGCCCTGCGCACGCAGTATCCGCTAG TTGTGAACTGTCAAT  73 193
CXD81_RS13205 2721810 .. 2721843 +  -4.5  -3.84451   TTGCCGCAGCGGCCA     TGGACGAGTTGCTCGG AGC CC-AGTGTCTCGACCA     TTTCGATTTCGGCGG  60 296
CXD81_RS13230 2727054 .. 2727074 +  -5.3  -2.53263   CGCCGGTCGCGCGAG            CTGGCCGAG GAG TTCGGCCGA            TGAGTTCGGCGTCGC  44 2
CXD81_RS13235 2727733 .. 2727743 +  -3.2  -3.53811   CAATTCACGGCGTCA                 TGTG TCA CGCA                 TTTCGACGGGGTCCC  49 103
CXD81_RS13240 NONE
CXD81_RS13245 NONE
CXD81_RS13250 2730137 .. 2730173 +   -13  -2.71791   TCAACGTACGCCCAG    GTTTCCGGCTCCGG GTCGCACTA CCGGAGCCGGAGCC    ATTTGGAGCACGAGT  67 72
        livH NONE
        livM NONE
CXD81_RS13265 NONE
CXD81_RS13270 2734065 .. 2734075 +  -8.2  -3.60098   AGCACCACGGCATCG                 GCGC CGC GCGC                 TTTCAGGTGGGCGAT  63 267
CXD81_RS13285 2736192 .. 2736230 +  -4.4  -3.53012   CGGCGCTGCACACCA   GTTGGCCTGCCACGATGT AGA ACATCGTGGTCAGCATGC   TTTCGCCGCGGCCGA  52 338
CXD81_RS13295 NONE
        trxA 2744374 .. 2744415 +  -2.1  -4.06864   CCGCGCATTCCCCCC TGATTCCCGC-GCGGGCC CGTCCGT GGCCCGCCGCCCGAACCC TTCTTCTTATCTCCC  58 66
         rho 2745731 .. 2745748 + -14.1  -4.54727   CACGCCCGTCCCGAC             CCCCGGC CCGC GCCGGGG              TTTTGCTTTGCGGGC 100 54
CXD81_RS13335 2752314 .. 2752326 +  -4.7  -4.09243   TAACGGTTTTTCCCC                GCTGC AAA GCCGC                TTTTCACGCCATGTC  62 38
CXD81_RS13340 2753162 .. 2753174 +  -6.2  -4.11501   ATATTCACCGCCAAC                CCGC CGCGC GCGG                TTTCCTTGTATTTGG  69 191
CXD81_RS13350 2756510 .. 2756549 + -11.5  -3.05384   GATACACCACGATGC GCGATGCCTG-GGC-GGGCG CGC CGCCCTGCTGCAGGCG-CGC TTCCATGGCCCGCAC  62 181
CXD81_RS13370 2761682 .. 2761715 +  -5.2  -3.14963   CACGGCGCCGGCCAG     GCCCTAGACTGCCA CGCAAT TCGCAGTCCAGCGC      TTCACTCGTTATGCC  49 133
CXD81_RS13375 NONE
CXD81_RS13380 2762919 .. 2762929 +  -4.6  -4.07568   GAGGCGGCCGGCACG                 TGCG TTA CGCG                 TTTTCGCGCGAAGCG  62 92
CXD81_RS13425 2774514 .. 2774537 + -11.7   -4.8622   CAAATCGTTGATCAA          GGCCTGGCA CATCGC TGCCGGGCC           TTTTTCATTGGCGCG 100 39
CXD81_RS13435 2777170 .. 2777186 +  -5.7  -2.64472   TGATGCGCAGGATGC              CGCGGTC ATA GGCCGCC              TGGATTTCCGACATC  45 268
CXD81_RS13445 2778787 .. 2778797 +  -5.4  -5.69473   TGCACGTCCCCCATT                 TCTC ATC GAGA                 TTTTTTTCTGATATC 100 300
CXD81_RS13455 2778961 .. 2778982 + -17.3   -4.8622   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 34
CXD81_RS13475 2781914 .. 2781928 +  -4.2  -2.73124   CCGGGCAGTTCGTTA               GACTAG GAG CCAGTC               ATTTCAACCCTAAAC  41 71
        kynB NONE
        kynA 2783593 .. 2783629 +  -3.5  -3.40403   CGTGCGCCGGGCTGC    TTGCCCGGCCTGGCTGG CGA CCCGCTAACCTGGGAAA    TTATCATGAAAGAAG  49 152
CXD81_RS13490 2783934 .. 2783949 + -10.4  -5.86061   GAGGCGCACCAGAAA              GCAGCC TGCG GGCTGC               TTTTTTTTCCTCGCG 100 58
CXD81_RS13495 NONE
CXD81_RS13500 2787278 .. 2787295 +  -6.9   -3.9777   GTGGGCACCGTGATG             CGCGCCG CTCT TGGCGTG              TTTCTCGCTCTTGGC  66 147
CXD81_RS13520 2791595 .. 2791611 +  -9.3  -2.73364   TGGCCGCCAGCCTGG              GCACGCC GGC GGCGCGC              TGATTACGGTGACGG  55 6
CXD81_RS13525 2792436 .. 2792470 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS13535 2794280 .. 2794312 +   -17  -3.01791   ACTCGGCCAGTTCCA     GCGCCCAGGTGCGGG TGCA CCCG-ACCAGGGCGC      TCTTGGCGGCCGAAT  82 290
        hpnC NONE
        hpnD NONE
CXD81_RS13560 2799601 .. 2799613 +  -4.7  -2.93073   GAAGACTCCTCAGGC                CGGCG TCG CGACG                TGGTTCTTGAGCCGG  44 450
CXD81_RS13585 2802727 .. 2802737 +  -3.2  -3.45366   TCATCCCGGTCGTGC                 TGGC ACT GCTA                 TTCATTCATTGACCG  48 3
CXD81_RS13590 NONE
CXD81_RS13595 NONE
CXD81_RS13600 NONE
CXD81_RS13605 2806676 .. 2806704 +  -6.6  -3.28712   CCGTGGCCGGATCGC       GCACGGCCTGGGC GAAC GCCTGGGCCA-GC        TTGTCGCGCACCGCG  52 184
CXD81_RS13620 2810523 .. 2810535 +  -4.7  -2.72344   ATGGACAATCTCCCC                GGCCG CAG CCGCC                TGCTTGCACATCCCG  43 499
CXD81_RS13640 2813704 .. 2813728 + -13.6  -3.30771   CCCTACGGCCAGTTC         GGTGCGGC-CG CCAT CGAGCCGCACC          TTGTGCCGGATGTCG  74 251
CXD81_RS13670 NONE
CXD81_RS13675 2824249 .. 2824280 +  -2.7  -3.14931   CGAACCGCCAGCCCT      GCGGGCGGACCTC TACCTC GTGGCCCGCCGGA       TTCATGCGGGCTGCC  43 364
CXD81_RS13710 2827704 .. 2827727 +   -16  -3.21416   TGCCGCCTCGGGATG          GCGC-GCGCGC CAG GCGCGCAGCGC          TTCCTGGTAGCGCTC  80 66
CXD81_RS13730 NONE
CXD81_RS13735 2831313 .. 2831340 +   -14  -4.56597   CTGAGCGCAACCCGA        TCGGCGGCGGGC CCGC GCCCGCCGCGGC         TTTTTCGACAACCAA 100 37
CXD81_RS13740 2832224 .. 2832263 + -11.5   -2.9162   CCTTGGCGCGCCATC CTGCCGCGGCGTGCGCC CCCACCAA GGCGC-CGCCGTG-CAG  TCGTTTCCGGAGTTC  63 69
CXD81_RS13745 NONE
CXD81_RS13750 NONE
CXD81_RS13755 2834452 .. 2834484 +  -5.3   -2.9296   CCGCGGCGCCATGAA      CCGGCGCATGGCGGC GGC GCCGTGGGGCGATGG      TATGGTTGGGCTTTC  46 65
CXD81_RS13760 2835735 .. 2835782 + -14.1  -3.61517   GCACCGCGGCCGCCT TGCGC-GGCC-ATGGCGCGCGCG CCCG CGCGTGCGCCGGCGGCCCGTGCG TTATTCGACACAGGT  78 300
CXD81_RS13765 2836697 .. 2836711 +    -7  -2.85668   GGATGCCTTGGCAAC               GAGCCG GCG CGGCGC               TATGGTATGCGGATA  50 53
CXD81_RS13780 2839971 .. 2839991 + -10.3   -3.6502   TGCTAGACTTTTCCG            TGGGCGGCG ATC CGCCGCCGG            TTTCCCTAGGAGGTG  70 70
CXD81_RS13785 2840500 .. 2840523 +  -7.4  -3.06302   GGCCCACGGCCGGGC          TGCCGCGTTGC GCC GCGG-GCGGCA          TTCCCTGCAGGTCCT  52 162
CXD81_RS13815 2846564 .. 2846586 +  -6.8  -3.29144   CGATGCGTTCGCCTT           CGGCCGCGTC GAG GGCCAGGCCG           TTGTAGCGGCGGTCG  52 305
CXD81_RS13825 2848578 .. 2848596 + -10.2  -3.44051   GGGGGCCGCAGGCTT             GGCGCCCA TCA TGCGCGCC             TTCTCGTAGTGGAAC  65 297
CXD81_RS13855 NONE
CXD81_RS13860 NONE
CXD81_RS13865 2857083 .. 2857132 +  -8.4   -3.9392   GCTGCGCCTGTACGG CGGGAC-GC-GCGCCGC-CGGGCGC TGA GCGCCAGCGCGGCGCGGCAGGCGGG TTGTTTACACTGGAG  70 1
CXD81_RS13870 2857791 .. 2857825 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        bamD 2868820 .. 2868848 + -21.1  -4.08064   ACTCGCGCAGTCCAA        GGAAAGCCCGGCC CCA GGCCGGGTTTTCC        TTTTGCGCGGCCGTT 100 45
CXD81_RS13940 2873484 .. 2873520 + -27.4  -2.71364   AAGCGCTGATCGCAA   CGCAGGCGCCGC-CCCG TCAT CGGGTGCGGCGCCTGCG    TCGTTGCCCCGATCC 100 32
CXD81_RS13965 NONE
CXD81_RS13970 2878218 .. 2878228 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 91
CXD81_RS13975 2879718 .. 2879736 +  -8.9  -3.28924   GGTATCGATCTGGCC             GGAAAGC AGCGC GCTTTCC             TTGTCGGCCACCGTG  59 511
CXD81_RS13985 2881328 .. 2881345 +  -2.5  -3.58343   ACACGACCGAGCCGG             CCAGCGC CTGG GCGCGGA              TTTCGCGATGCTCGA  50 376
        mdeB 2893689 .. 2893726 + -20.6  -3.06796   CCTGGCAGTCGTGAC   GGCCGCATCGGCCGGG ACGTGG CCCGGCCGATGCCGTC    TTCGCTGCGGTGCAG 100 27
CXD81_RS14025 2896272 .. 2896289 +    -4  -3.04144   GGCTCCATAACTCTT             CTGGCG CCAAGA CGCCCG              TGTTACCCATGCAAA  44 173
CXD81_RS14030 2896956 .. 2896966 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS14040 2898308 .. 2898338 +  -6.8  -3.65046   GCGCTTGGTCAGGAA      GCGCATGCGCCGG TCGATT TC-GCGCAGGCGC       TTCTTGCCGTACAGG  57 363
CXD81_RS14100 NONE
        recJ 2917891 .. 2917902 +  -7.2  -3.65812   GAGCACGCCGCCTGA                GGGC CGCC GCCC                 TTCTGTTACAAACCG  61 26
CXD81_RS14110 NONE
CXD81_RS14115 NONE
        lysS NONE
CXD81_RS14125 NONE
CXD81_RS14170 2933194 .. 2933212 +    -8  -3.53012   GCCAGCATCTGCCGC             GTGACGGC ATC GCCGCCGC             TTTGCAGCAAGGAGG  58 170
CXD81_RS14190 2937097 .. 2937117 +  -2.5  -3.31144   GCCCCGGGAGGAACA            TCATGTTGA AAG TCAGCGAGA            TTCTGCGCGTCAAGG  44 60
CXD81_RS14195 2937606 .. 2937616 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 74
CXD81_RS14200 2938655 .. 2938665 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS14205 2939863 .. 2939888 + -16.9  -3.12595   TCACGCGCAGCGGCA         CGCCGCG-CGCA ATC TGCGTCGCGGCG         TATTGCATCATTGCA  80 219
CXD81_RS14215 NONE
CXD81_RS14220 2942998 .. 2943008 +  -4.6  -3.30124   GCCAGGCGTTCGGCC                 CGCT GAT GGCG                 TTCTGCGCGATAGCG  49 374
CXD81_RS14245 2945835 .. 2945850 +  -4.6  -2.57132   CAACTTGTAACGGTT              GGCTGG CCAT CCACCC               CTTATCCAGCGGCGC  42 53
CXD81_RS14250 2947928 .. 2947944 +  -2.2   -2.8372   TACGGCGGCCGCGGT              CTGAGC CTGCT GCTAAG              GTTTCATGGCAAATA  40 22
        folP NONE
CXD81_RS14260 2950170 .. 2950189 + -16.4  -5.06414   CCGGACCTGCCCGAA            GGCCCGCC TGAT GGCGGGCC             TTTTTGTTGCGCGGG 100 48
CXD81_RS14265 2951291 .. 2951318 + -21.4  -3.48276   CCGACGGGGTGCTGG        GGTGCCTGTCCC CGCG GGGACAGGCACC         TTGTATCGGGGCAGG 100 154
        ppk1 2955221 .. 2955240 +   -15  -5.09259   CGGCCCGCTGCCGCC            TGGCCGCC CGCG GGCGGCCA             TTTTATTTTGAAATA 100 43
        pstS 2956481 .. 2956502 + -10.1  -2.52464   CCTGGCCGGACCAGT           GAACGGCGA GCGA TCGCCGTCC            TGACTTCGCGGGGCG  56 68
        pstC NONE
        pstA NONE
        pstB 2959273 .. 2959307 +  -7.7  -3.49858   CGGAAGACTACATCA    CCGGCCGCTTCGGCTG AGGC CGGCCGGCG-GGCCGA     TTCTGGTATAGTTGC  60 9
CXD81_RS14300 2959500 .. 2959540 + -11.2  -3.86346   TAGCCGCTCCATGCA TGTCAAAGCCCCGATACGG ATTT CCG-GTCGGGGCTTTCGCG  TTTCTGCGGGCGTGC  77 119
CXD81_RS14305 2960686 .. 2960724 +  -3.8  -3.32844   TCGGGGTCGGGGTGC  CGCCCGGCGTGCTCG ATGACATAGG CGAACAC-CCGGCCG   TTCTCGCGTGCGAAC  47 104
CXD81_RS14330 2967090 .. 2967100 +  -8.2  -3.53091   CATCAGCCCTTGCGC                 GCCC ACC GGGC                 TTTCGGCAAACGGGT  61 336
CXD81_RS14345 NONE
        cobA 2973128 .. 2973168 + -14.7  -3.32498   TGCCCAGGCCCAGTT CGGCG-CGCGTGCCGCGC AGTTCG GTGCGGTGCGCGATGCCG  TTGGTGTGTACCGTA  79 220
        queA NONE
CXD81_RS14400 2981964 .. 2981990 + -12.3  -2.70932   GCGCGGGGTCGACTA        GGGCCG-GCC-CC CCC GGCGGCGCGGCCC        TCGTTGCGCCGCGCC  65 25
        yajC 2982464 .. 2982482 + -17.4  -3.65046   TGTAAGGTCACACAA             GGCCCCGC GTG GCGGGGCC             TTGTTCCGCTCACCC  91 36
        secD 2984429 .. 2984454 +  -2.5     -3.37   CCCTGCCGCCCGCCG         TCC-TGATACGC AAG GCGAAACATGGA         ATTTTTCCGGATTCA  46 54
        secF 2985408 .. 2985437 + -22.2  -5.81412   CCCGGTAGTAAAAAA       CCCTGCCCGGCC AAATGC GGCCGGGCAGGG        TTTTTTTTACATGCA 100 48
CXD81_RS14420 2987112 .. 2987135 +    -8  -3.61398   CGTCGTCAAGCAGCA          CTTCGGGGCG CGCG CGCCACGACG           TTCTTGAGCACCCAG  60 403
        miaB NONE
CXD81_RS14435 NONE
        ybeY 2990599 .. 2990634 +  -5.3  -3.31905   GCGCCGCGCAGATTG    GC-GCCAATGCGCCCC AAATC GGGGAACAATGGCCGC    TGTTGTATGCAAAAT  51 43
CXD81_RS14445 NONE
CXD81_RS14450 2993664 .. 2993703 +    -5  -3.53444   TAGACGATGACGCCG GTGTCGTGG-CTTGC-GC ACCAGG GCAGCAGGTCCGCGGCGC  TTTCGCGGCGGATGG  52 440
CXD81_RS14460 NONE
CXD81_RS14465 2994765 .. 2994778 +  -8.1  -2.80398   GGTGTAGAAGTTACG               CCGCT GCGG AGCGG                TAGTTCAGTTGGTTA  51 54
CXD81_RS14470 2994863 .. 2994884 + -14.5   -5.7946   AAAAAATTCCGAAAA           GCCAGTTGC GTAA GCAACTGGC            TTTTTTTCTTCCCGG 100 40
CXD81_RS14475 2996310 .. 2996329 +  -4.8  -3.28712   GCGAATTGGCTTCGT            CGCGGCGC TCCT GCGGCACG             TTGTCCAGCAGCACC  49 235
CXD81_RS14540 3008488 .. 3008522 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 493
CXD81_RS14550 3009761 .. 3009773 +  -4.7  -2.90496   GCCCAGCCGTCCGCC                GCAGC ACC GCCGC                TGATTTCCCGCGGGC  44 10
CXD81_RS14555 3010176 .. 3010203 + -11.2  -2.75074   GCCCCGATGAAGATG        GCCGGATCGACG CGCG CGTCGTTCAGGC         TGATGTTCCAGTGCA  59 70
CXD81_RS14595 NONE
CXD81_RS14600 3017416 .. 3017426 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 238
CXD81_RS14605 3018632 .. 3018649 +    -4  -3.60805   CCGCGCGCCACGCCG             GCGGGC AGGACG GCCCGG              TTTGCGCTACGCTGT  51 44
CXD81_RS14610 3019381 .. 3019402 +  -8.1  -3.64599   GGCGCCCCGGTCACA           CGAATGTTGC ACC GCAACA-TCG           TTTGCGGTGTAATAG  63 48
CXD81_RS14615 NONE
CXD81_RS14620 NONE
CXD81_RS14625 NONE
        fabI 3025227 .. 3025238 +  -7.2  -3.33483   GGAATCGGCACCTCG                GCGC CGCG GCGC                 TTCATGATTTCGATC  55 470
CXD81_RS14650 3030157 .. 3030167 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS14655 3031178 .. 3031191 +  -3.1   -4.2074   CACAACTAGCTGCCC               GGTTT GAAG AAGCC                TTTCTCTCTTGGGAG  63 32
CXD81_RS14660 3032443 .. 3032469 +   -13  -4.65895   CCATGGCAGTACGTA        CGCCCGGCCGC CTCACC GCG-CCGGGCG         TTTTTGCGTCCGGCG 100 79
CXD81_RS14680 NONE
CXD81_RS14685 NONE
        folD NONE
CXD81_RS14695 3044506 .. 3044541 +   -19  -2.59431   TGCAAGCCTGACCTC    TCAGGTGCCTGTCCCC GCAG GGGGACTGGCACCTGC     TGACTTCTGGACGCC  87 30
CXD81_RS14700 3045309 .. 3045326 + -14.1    -3.965   ACCCAATGATCCGGA             CCGCGCC CCAG GGCGCGG              TTGTTGCTTTTGCGC  84 32
CXD81_RS14705 3045718 .. 3045748 + -25.6  -4.07568   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 44
CXD81_RS14725 3052209 .. 3052238 +  -4.3   -4.1822   CACCACCCGCAGCCC       CACCAG-TTCGC ACATGCG GCGAATCTGGCG       TTTCTTGCCCTCGCG  63 182
CXD81_RS14735 3053451 .. 3053479 + -10.2  -4.07885   CGCTGGCGCGCGCGC       CCGTCGCGCCGCG CTGA CGCCGC-CGGCGG        TTTTGACGCAGAATC  78 9
CXD81_RS14745 3056201 .. 3056217 +  -2.2  -4.42238   CGTCCGACAGGGTGA              CCTCGA CGCTC TCGATG              TTTTCCTTCAACTGC  68 234
CXD81_RS14755 3058644 .. 3058655 +  -7.2  -3.78953   CTTCCACTTGCTGCA                CCGG CAGG CCGG                 TTTCCTCCTGGGCCT  64 435
CXD81_RS14770 3061237 .. 3061257 +  -8.1  -3.01712   CCTGGTGTTGAAGCC            GGCGGGCCC CGA GGCCCCGGC            TCTTCGCGGACCACG  53 438
        mltB 3076879 .. 3076891 +  -4.7  -3.57144   AGATCTTCGGCATGT                AGGCC TCG GGCCA                TTTGCGGATGCCCGG  54 322
CXD81_RS14925 3094128 .. 3094148 + -18.3   -5.4505   GCCGCTACAATGAGG            GGGCCTCGC ATA GCGAGGCCC            TTTTTTCTTGCCGCG 100 52
        ubiG NONE
CXD81_RS14935 3095660 .. 3095682 +  -2.7  -2.77899   GCGGGCCCCATGCCC          GT-GCCGG CGCCACAC CCGGCCAC           TGATTGCTCCACCCA  40 59
CXD81_RS14940 NONE
        ssrA 3097484 .. 3097506 + -13.6  -5.85178   CAAGTATTTACCTAA           TAGCCAACTT CAA AAGTTGGCTA           TTTTTTTTGGCTGTT 100 57
CXD81_RS14950 3097751 .. 3097779 +  -6.9  -3.02471   GCGGGGCAAAATAGT        TTGTTAATGTGTA CTA TACACATTAAAAG        TGTGTATAGTACACA  51 19
CXD81_RS14955 3097982 .. 3098008 +  -7.9  -2.84298   GGTTTGAAGTGAGAC         ACAAGCCCCGA AGCAA TCGGGGCCTGC         TAGTTGTGAACTGTC  52 29
CXD81_RS14970 3099510 .. 3099547 + -11.3   -3.6682   TCCGACGCACCCAGC   AGAGAGCCCCGA-CTGGA CAA TCCGTATCGGGGCTCTCG   TTTGCGTGGGTAGCA  73 55
CXD81_RS14980 3101933 .. 3101967 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS14995 3104492 .. 3104525 + -13.1   -3.0497   GACGGCACTCCGTAC     ACGAC-CGCTTCGCGC ATG GCGCGCAGCGCGTCGG     TATTCCAGATACTCT  70 111
CXD81_RS15005 3107029 .. 3107039 +  -2.4  -3.02381   CGGAAACCAATTCCC                 CCAG ATG CCGG                 TCTATGGTGTTCTGC  41 119
CXD81_RS15010 NONE
CXD81_RS15020 NONE
CXD81_RS15025 3112050 .. 3112081 +  -5.6  -3.14132   TCAGGCGCAGGGCCA      GCGCCGCCACCGCG TCCT CCAGGTGGCGCGGC       TTGCTCGCCCCCACG  47 102
CXD81_RS15040 3115799 .. 3115818 +  -2.8  -3.53761   TTGACAAGCGCCCCC            GCGACGC CCAAGAT GCG-CGC            TTTCGCCGCCCCTTG  49 37
CXD81_RS15045 3116391 .. 3116425 +  -7.8  -2.58999   GCGTAAGTCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS15145 3136905 .. 3136916 +  -5.8  -3.53811   TATCGCGCCGCTGCA                CCCT GGTC AGGG                 TTTCGGGCAGATCGA  57 414
CXD81_RS15155 3138404 .. 3138451 +  -4.1  -2.71712   GATCGCCTCCTTGGG CGCTGCGC-GGCCG-ATGCGC-CG GCG CGCGCCCGTACGTCCAGTGTAGCG ATTTCGGCGCCGCGC  41 220
CXD81_RS15175 3141793 .. 3141827 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS15190 3145431 .. 3145446 +  -3.2  -2.87132   GGCTGACCGAGATGC              TGCTCG GTTC CGAGGA               TCTGTAAGGAGGCCA  41 3
        ilvN 3145954 .. 3145981 +  -8.2  -2.55074   GGATACTGAAAATCT        GACCGGCGCGCC TGGC GGCGCGCCACCC         TGCATTAGCATTCAC  52 24
        ilvC 3147094 .. 3147111 + -14.1  -5.79595   GCAGGCTGGTCCAGA             CGCGCCC CACG GGGCGCG              TTTTTTCTTTTCCGC 100 75
        pssA 3148165 .. 3148178 +  -8.1  -3.27022   CCTGGCGCACGCTGG               GCAGG CCGA CCTGC                TTGATCTCGGCTGGC  56 199
CXD81_RS15215 3148745 .. 3148768 +  -4.5  -3.63367   GGCAACAGCGTAACA          GGGCGCCCGG TTGTC TCGGG-GCTC          GTTTTTCTTGAAACC  55 28
CXD81_RS15220 3149129 .. 3149164 + -16.8  -5.04601   CTCCCCATGACGCAA    CCGTGGTCGGGGCGAC GCAT GTCGCAACGGCCACGG     TTTTTCATTTGTAAG 100 54
         pnp 3151375 .. 3151392 + -14.1  -4.66163   TTCCTGACGCAAGAA             CGGCGCC CGCG GGCGCCG              TTTTTGCGTCCGCAT 100 50
CXD81_RS15230 3152356 .. 3152390 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS15240 3154806 .. 3154829 +  -3.7  -3.73775   TCACATGGAAATCCT          TGGGGTCGC TGTAGC GCAGCCCCG           TTTCGTAAGGCTGCG  55 336
CXD81_RS15255 3156724 .. 3156756 +   -14  -4.66318   TAGCGCCAGCCGGAC      GGCGGGCGCGCCGG ATCGC CCGGTGCGCCCGGA      TTTTCTTGCCCTGGT 100 38
CXD81_RS15260 3157604 .. 3157616 +  -5.5  -3.02074   CGCCGCAGCTTAAGT                TTCCG TTC CGGAG                TCTGTAATGTCTTTG  47 28
        secG 3158079 .. 3158108 +    -3  -4.09685   TGCTAGAATGCCCGA      CTTT--CCAGGATC TTCG GATCCTGGTCGAAG       TTTTGCAGGATGCCG  59 35
CXD81_RS15270 3158265 .. 3158290 + -13.3  -4.91109   AAAGCCAGCAAAAAA         GCCCATATGCG TCAG CGCCTATGGGC          TTTTTGTCGTCCAGG 100 86
CXD81_RS15275 3161186 .. 3161211 +  -2.4  -3.58343   CAGGGCCCCGGCCTC         CCGGACCAGC AGTTGC GCCAGTTCGG          TTTCCCGATGCTCCG  50 123
CXD81_RS15285 3163411 .. 3163449 + -12.4  -3.87994   TCCTATCGGACGCGC  CTGTCCGCGGCGTAGCG TCCGTC CGC-ACGGCGCGGGCGG   TTTGTCGGCATCACT  81 11
CXD81_RS15290 NONE
CXD81_RS15295 3166413 .. 3166423 +  -2.4  -3.35679   GTCGGTGCTGGCCCT                 GCGC GAA GCGA                 TTCTCGATCGGGCCG  46 494
CXD81_RS15305 3168592 .. 3168620 +  -2.9  -3.86015   CCACCGCACGCCGAT        GACCGCGAGTTGG TGC CCAAAGCGAGGAC        TTTGTGGGACAGATA  56 91
CXD81_RS15310 3170088 .. 3170102 +  -5.6  -3.53091   GCTGCTGTTCCTCGC               GCAGCG CTT CGATGC               TTTGGCCGCACGCCT  52 374
        metC NONE
CXD81_RS15330 3174159 .. 3174217 + -18.7  -4.56597   TTCCGATTCGAGCAG GTCCG-GCGCCGCGGGCG-GCGCCGGTGG TTG CGTTCGGCCCGCGCCCGCGGCGCGTGGCC TTTTTCAACGAAGAA 100 66
CXD81_RS15335 NONE
CXD81_RS15340 3177303 .. 3177315 +  -3.3  -3.63627   CAAGGTCCGGTCCGA                CCCCA CCG TGGCG                TTTCGCATCTGAACG  53 1
CXD81_RS15365 3184701 .. 3184725 +  -5.6  -4.00042   TTGCAGCATGGGTTG         CGCGGCATGGC GCGG GCCG-GCCGCA          TTGTTTGATGGCGCG  63 63
         azu 3185415 .. 3185436 + -11.5  -2.62184   ATGTGCTCGGCCCGC           TCGACCCGC GCCT GCGGGCCGA            TGATCTCGCGAAACA  59 142
CXD81_RS15400 NONE
CXD81_RS15405 NONE
CXD81_RS15410 3196517 .. 3196530 +  -3.7  -4.35461   ACGCGGCGGCCTGAG               CGGGC GCGA GCCCC                TTTTCATCGTCTTGA  68 59
CXD81_RS15415 3197436 .. 3197458 +  -3.3  -3.38046   TGGCCAGCGGCTGGA           GGCGGCATG ATGCG CGTGCTGCA           TATTTCGGATACCCA  48 16
CXD81_RS15420 3198266 .. 3198280 +  -9.2  -3.14795   CGGATGACGCGCGCC               GCGGCG CGA TGCCGC               TGTTCGTGAACCTTT  59 34
CXD81_RS15425 3199259 .. 3199274 +    -6  -2.66326   CTTGCCGTCGCTGAA              CCGCTC CAGG GTGCGG               TCGATTTCCCGTTCA  45 207
CXD81_RS15455 3202981 .. 3203016 + -26.4  -4.24326   GGGCCTCGTGCCCGC    GCGAAAAAAGCCGCCC TTCG GGGCGGCTTTTTTCGC     TTTTGAATCATGTTT 100 86
CXD81_RS15460 NONE
CXD81_RS15465 3203987 .. 3204003 +    -5  -3.05384   TGCGCGCTGAACCAC              CGGCGC GGGCG GCGCGG              TTCGATCGCGCCGCC  45 31
CXD81_RS15470 NONE
CXD81_RS15475 NONE
        nuoE NONE
        nuoF NONE
CXD81_RS15490 NONE
        nuoH NONE
        nuoI NONE
CXD81_RS15505 NONE
        nuoK NONE
CXD81_RS15515 NONE
CXD81_RS15520 NONE
        nuoN NONE
CXD81_RS15530 3218133 .. 3218149 + -13.7  -5.78622   GCCGCTTCAGCGATA              CCGCCTC CAT GAGGCGG              TTTTTTTTCGCCTAC 100 50
CXD81_RS15535 3220667 .. 3220687 + -11.8  -4.98531   ACCCCGCCGTTCCGA            CGGCCTCC CGCAA GGGGGCCG            TTTTTCATTTCCGGC 100 52
CXD81_RS15540 3223146 .. 3223162 + -15.1  -6.09133   GCGCAGCAGGGAAAA              CCGGCGC ATT GCGCCGG              TTTTTTTTTGGCATG 100 49
CXD81_RS15545 3223994 .. 3224023 + -10.6  -2.65808   GAATTCGGCCACTTC       GCCGGCGGCCTG CCGGGT CAGGCCGACGAC        TGCGTTCTTGGCGGT  55 266
CXD81_RS15565 3228510 .. 3228539 + -23.7  -3.03006   CCGTCAAGTGTTCAT       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TATGTGTGGCTTACT 100 114
CXD81_RS15580 NONE
CXD81_RS15585 3234134 .. 3234144 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS15610 3239720 .. 3239730 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS15615 3240769 .. 3240790 + -10.1  -3.01712   CTCTACAATCGGCAG           CGCCCGG ACGTCGAG CCGGGCG            TATTGCCGGCCGCGC  60 60
CXD81_RS15620 3241912 .. 3241931 +  -4.4  -3.45571   GCCGATATCCATTGA            TGTATATA GTCA TGTATACA             TTGATATTTCCCCAC  51 162
CXD81_RS15625 NONE
CXD81_RS15630 NONE
CXD81_RS15635 NONE
CXD81_RS15640 NONE
CXD81_RS15645 NONE
CXD81_RS15650 NONE
CXD81_RS15655 NONE
CXD81_RS15660 3251183 .. 3251223 +  -3.6  -3.65046   TCGAGCGGCGGGCCG  CGCGGCGCCCGCCGCCGG CCCGT CCGGCGCCCGGCCAGGAG  TTATTACAATGACAA  54 44
CXD81_RS15665 3252092 .. 3252105 +  -5.9  -2.78935   CGAACCCGTGTGCTC               GCGGT TGCC GCCGC                TATACTGGCCGATAT  46 86
CXD81_RS15680 NONE
CXD81_RS15685 3256692 .. 3256703 +  -5.8  -3.01712   ACGGCGGCTTCTACA                TGCC CTGA GGCA                 TGTTCAAGCCAACAC  47 18
CXD81_RS15690 NONE
CXD81_RS15695 3258852 .. 3258863 +  -5.8  -3.93695   TTGCGCCAGCGGATT                GACC CGCA GGTC                 TTTCTCGCTGGTGAA  63 522
CXD81_RS15755 3274688 .. 3274707 +  -4.3  -2.71144   TTGATCTGCATGTAC            TCG-GCCA GGCCA TGGCGCGA            TCCTTCGCGGCCGTA  40 84
CXD81_RS15790 3284767 .. 3284792 +  -8.9  -3.70902   CGCGAACGCAAAAAA         GCCGACACCAC GTTT GCGGTATCGGC          TTTCGCTATGCGCCC  65 63
        rplU NONE
CXD81_RS15815 3288284 .. 3288305 + -17.3  -5.45802   TCCCCGGAACGGCGA           GCCCTGCCG CACG CGGCAGGGC            TTTTTGTTTTCAGGC 100 53
        obgE NONE
CXD81_RS15825 3290783 .. 3290805 +  -4.1  -3.13073   ACCAACCAACATGCC           GGACAAGCC CCTCC GATTTGTCC           TGTATTCCTGACCGT  45 62
CXD81_RS15835 3292497 .. 3292531 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 310
CXD81_RS15850 3293839 .. 3293862 + -10.2  -4.41348   TGGAATAATGCCCCT          GCCGCGC-CCC ACC GGGCGCGCGCC          TTTATTTCAGCGAGA  88 56
CXD81_RS15855 3296234 .. 3296244 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 183
CXD81_RS15860 3297266 .. 3297310 + -10.6   -2.8294   ATCGGCGCCGTGTTC CCACGCGCGCAGCGGGAGCGGC AGT GCCG-TAGCGC-GCGCGTGAGG TGCTTGTGCACCATA  57 43
CXD81_RS15870 3298945 .. 3298975 +  -6.2  -4.27584   GGCCGTTCCGTCTTA       GAGATTGGTAGTGG TAA TTACTTTCAATCTC       TTTTCGGTTAAACAT  70 135
CXD81_RS15875 3301591 .. 3301604 +  -3.7  -3.36803   CGTTCCGGCGCGCCT               GCAGG ACCA CCGGC                TTGTCGATGCCCTTG  47 217
CXD81_RS15900 NONE
CXD81_RS15905 3308188 .. 3308211 +    -3  -4.17556   GATGGTGACGGCGTA          GCCGGACACG CGCG CCTGTTCGAC           TTTCTTGCGGATCTC  61 285
CXD81_RS15915 3310673 .. 3310683 +  -6.8  -3.09516   ATCCACAAGGGGCGG                 CCGA TGT TCGG                 TTACATCCTGCGGCG  52 101
CXD81_RS15920 NONE
CXD81_RS15925 NONE
CXD81_RS15930 NONE
CXD81_RS15935 3315588 .. 3315598 +  -2.4  -4.41348   CGTCCCGGTGGACCC                 CGTG TAA CCCG                 TTTATTTCCCAGCCC  65 19
CXD81_RS15940 3317187 .. 3317226 +  -5.7  -3.54408   GACCGCGGCTTCCAG GAGTTCGG-CGTCGCTGTC GGCC GACAGCG-CGACCGAGCAG  TTCATTTCGCTGGGA  57 197
CXD81_RS15950 3318582 .. 3318592 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 121
CXD81_RS15955 3319631 .. 3319652 + -10.1  -3.01712   CTCTACAATCGGCAG           CGCCCGG ACGTCGAG CCGGGCG            TATTGCCGGCCGCGC  60 60
CXD81_RS15965 3320843 .. 3320870 +  -6.2  -2.79188   CGCCAGCGGATCGGG        CGTGAGCGTGCCG CGG CGGC-CGTTGGCG        TAGTTGCCTTCGATG  46 163
        lptD NONE
CXD81_RS15990 NONE
        rsmA 3328419 .. 3328457 + -10.3  -3.01712   GCGCCACCACCGGCA  CGCCGG-CGGCGCTGGC GATGCGG GCCA-CGCCGGCCGGGG  TCTTGCCGCGCAGCG  59 254
         pyk 3331343 .. 3331376 +  -5.2  -3.61398   GTTGAAGCCGTCCTT     GGCGCCGG-CGATGA AGGTC TCGTAGACCGGCACC     TTCTTCCAGGCGCCC  54 454
CXD81_RS16095 NONE
CXD81_RS16100 3347573 .. 3347610 +  -6.1  -2.66787   GCTGAGCGTTCGCGC   GCATCGT-CGCGCACGCC GCT GGTGGGCCCGGGCGCTGC   TCATCTCGCTGTTGC  46 36
CXD81_RS16110 3348858 .. 3348873 +  -6.2  -5.00616   CTATGCTCGCATACA              CTGTAT GTCC ATACAG               TTTTTTGGGCCACAA  86 294
CXD81_RS16125 3349673 .. 3349695 +  -7.6  -3.63991   CGAGCGCCAACAGCA           TTAGCGGCCG CAG CGGCGGCCAA           TTCTTGAGCGTCATC  60 278
CXD81_RS16245 3366263 .. 3366282 +  -4.2  -2.91274   GATCGGACCGAAGCC            GC-CGGCGA CCT TCACCGAGC            TATGCTTCAGCTGAG  43 161
CXD81_RS16290 NONE
CXD81_RS16295 NONE
CXD81_RS16300 3374665 .. 3374682 +  -3.3  -3.54424   ATCGAGGAAGAAGCG             GCG-GCGC TGC GCGAACGC             TTTCAGGGCGTCAAC  49 52
CXD81_RS16305 3375751 .. 3375766 +  -4.6  -3.01712   CAGCGCAAAACCAAC              AGTGCC CTGG GGCACG               TGTTGCAGAGACCCC  45 47
CXD81_RS16310 3376149 .. 3376164 +  -3.2  -3.94438   CACCCGACATCCGAA              GAAAGC ATAT GCTTGC               TATTTTGTTAGCATG  58 167
CXD81_RS16325 3379354 .. 3379377 +   -21  -2.60496   GGTAAGCAAGCGCGC          GGCCGCCGCG CTGG CGCGGCGGCC           CTGTTTCAGGCCGCC 100 36
CXD81_RS16360 3385722 .. 3385762 + -12.4  -2.73875   GCTGAGCGCGGGTGT CGCAGTGGCCGGCGCGCGC CCGG GCGCGCGCC-GCTTCAGGG  TCGTATTCCGAGGAA  65 36
CXD81_RS16365 3387207 .. 3387236 + -15.7  -3.01712   TGGCCTGACGCACGC       GGAGGCGGCGCGCC TCA GGC-CGCCGCGTCC       TCTTCCAGCCAGGGG  77 33
        recQ 3391660 .. 3391687 + -16.2  -3.14344   GGCGGTTGGCGATAC        GCGGCGTGCCGC GCGA GCGGCGCGCCAC         TTCGTGCGCGCCGTC  80 410
CXD81_RS16395 3393509 .. 3393527 +  -6.6  -3.40403   AATGATGCTACAGGG             GGCTGCGC GAT GCGTATCC             TTGTCATCGGCGGAA  55 90
CXD81_RS16400 3394632 .. 3394662 +  -6.6  -3.39784   TCCGCGCCCAGCTTG       CCGCGCATCTCCAG CAG CAGGCGCTCCGCGG       TCTTCTTGCCGATGC  55 228
CXD81_RS16435 3400434 .. 3400487 +  -6.5  -3.18264   CTATTCGCGCATCAG GGCTTCGATCTCGCGCGCCTGCACCG GCA CGCCGCGGGTGA-TGAGTTCGCAGCC TTCCTCGGTCACCAG  51 50
CXD81_RS16445 3403306 .. 3403330 + -14.3  -2.87132   CAGAGCACCCATCTG          CCGCATCCTGT CAT GCAGGGTGCGG          TATGTCCGACGCGCA  71 218
CXD81_RS16450 3404044 .. 3404058 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 215
CXD81_RS16460 3406103 .. 3406114 +  -2.2  -3.53566   TGCGGGTTTTGGCAT                CGGA CCAG TCTG                 CTTTTCTTCTTGGCT  48 224
CXD81_RS16465 3407325 .. 3407363 + -18.8  -2.79831   GCGCGTCGTCAACTA   CAATCAGGCGGCGAGGCG TCG CGCCTCGCCACCTGCTGG   CTGTTTTCGGATGAC  87 58
CXD81_RS16470 3408268 .. 3408300 +   -10  -3.53012   TGAGCGCGGCTTCGA     TACC-CGGCCTTATT CCGG AATCAGGCCGTGGTA      TTTGCGGCCCAGGGC  67 38
CXD81_RS16480 3410737 .. 3410756 + -11.4  -3.21354   TGGATGCCGGCAGCG            TTGCGCGG CCAG CCGCGCGA             TTGCTGGCTGTATGC  66 53
CXD81_RS16505 NONE
CXD81_RS16510 3414855 .. 3414869 + -12.8  -4.27316   CTGCGCCAGCTTGCT               GCCCCC CAG GGGGGC               TTTTGCCTTGGGGCG  91 69
CXD81_RS16515 3416616 .. 3416634 +   -11  -3.13403   CGCCTGCACCAGCAG             CGTCGGGA AGT TCTCGACG             TCTTCCTCGCCCAGC  64 190
CXD81_RS16525 3417743 .. 3417753 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS16530 3418768 .. 3418793 +  -9.7  -5.00616   TCTAGCGCATTGCCC         TGCACGCCCCCC CGG GGGGGGCCT-CA         TTTTTTCCGGAAACC  95 36
CXD81_RS16535 3419739 .. 3419767 + -12.3  -2.87132   TGCTCCTTGTTGCGG        TGCCGCATCGGCG CCG CCCCGGGGCGGCA        TCTATCCGCAACCAC  66 139
CXD81_RS16540 3420790 .. 3420802 +  -9.1  -3.71917   AGCCTGACTAACAGG                CGACC TGG GGTCG                TTTCCGGTTTCCGGT  68 183
CXD81_RS16545 3425259 .. 3425317 + -22.6   -2.5474   CGGCGGGCGCGCAGG CCTCG-CCCGATCGGCCGGCCGGGCCGCGC GAT GCGCGGCCCGGCCG-C--ATTGGGACGCGG CCTTTATTGCTTTTC 100 57
CXD81_RS16555 3427333 .. 3427353 +    -9  -5.40072   GCAGAGCTGGAATTC           G-GGCCACC TTCG GGTGGCCTC            TTTTTTTGCCCAAGG 100 95
CXD81_RS16585 3432169 .. 3432191 + -16.2  -3.34715   GACACCATGAGGGGC           GGCCGGCCCG GTT CGGGCCAGCC           TGTTTCCAGCACGTC  82 158
CXD81_RS16645 3443231 .. 3443279 + -13.8  -3.35679   CGCCGCAGGTCGTTG CGGCCCGGCGTGCCCGGTCCGC GCCGACA GCGG-CCGGGC-CGATGGCCCG TTCTCACTGGAAGGG  77 207
CXD81_RS16650 NONE
CXD81_RS16655 NONE
CXD81_RS16660 3446922 .. 3446971 +  -9.7  -5.07011   ACCGCATCGGCGGCG CGTATTAGGGCTGGCGGGCGTCC GTCG GGACGCCGCCCGGCCCGGGATCG TTTTTCCTTTATCTG  95 18
CXD81_RS16670 3450244 .. 3450295 +  -3.6  -3.14132   TTGCACCCTTCACAG CGCGCCCGA-GCCGCGCCCGGC GGCCAGCCAG GCCGGGT-CGGCGTAGGAGGCG TTGATGCGCGAGGCC  45 125
CXD81_RS16680 3452112 .. 3452128 + -13.7  -5.60993   GCGGCCCACGAAAAA              GCCCTCC AGC GGAGGGC              TTTTTTTCTGAGGCG 100 47
CXD81_RS16695 NONE
CXD81_RS16700 NONE
        ftsY 3460185 .. 3460210 + -20.5  -2.90496   GTTCGCGCCTGCCCG         CAACGCCGCCC GTCC GGGCGGCGTTG          TCATTTCCAGAACGG 100 46
CXD81_RS16775 NONE
CXD81_RS16780 NONE
        nusB 3470640 .. 3470672 + -11.1  -3.72695   GCGGCGCTGACCTTC      CGCGGGCGCGCCCGC GCG GCGCGTCCGTTCGCG      TTTGCTGGCAGGAGT  73 31
        thiL NONE
CXD81_RS16795 NONE
CXD81_RS16800 3472886 .. 3472929 + -14.4  -3.28745   CAGGCACCCTGAGAA GTCAGCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGGGGGG TTACGTTCTTACCGC  75 119
CXD81_RS16825 3479859 .. 3479882 + -19.6  -6.06723   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTTGGGAAG 100 44
CXD81_RS16875 3490596 .. 3490606 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 192
CXD81_RS16885 3491645 .. 3491655 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS16890 NONE
CXD81_RS16895 3493608 .. 3493622 +  -3.4   -4.2828   ACTTCGCCGCCATCG               GGCAGC ACG GTCGCC               TTTTCCTGGATGCGG  67 245
CXD81_RS16910 3496377 .. 3496403 +  -2.8  -5.06103   CGGGAGCAGCGCGGC         TTGTCCGGCTGC CCA GCGGTCTGGCTA         TTTTTTGCAAATTGT  79 442
CXD81_RS16920 NONE
CXD81_RS16925 3497143 .. 3497186 + -22.8  -2.72471   TGTCCTTCATCGCGC ACAAAACAAAATGCCCGCAA GCGA TTGCGGGCATTTTGTTTTGA ATTCTCTGGTGGCGC 100 80
CXD81_RS16945 NONE
CXD81_RS16950 3502018 .. 3502031 +  -5.9  -3.30474   GCCTGTTCGAGCGCT               GGCTG TAGC CGGCC                TTGCTAGTTGTGAAC  53 18
CXD81_RS16975 3507735 .. 3507757 + -12.7  -4.57569   GGCGCAAAGAAAAAA          CCCCGG-CGC TTGC GCGACCGGGG           TTTTTGGGCACATCA 100 57
CXD81_RS16985 3508675 .. 3508703 + -15.4  -3.72576   CGCGGCAAAGAGAAA       GCCCCGG-CAATC ATGC GATTGACCGGGGC        TTTCATGAAGGCAGG  85 46
         rnr 3511691 .. 3511716 +  -6.7  -4.08064   ATTGCACCGTAGACC         GGGCCGCAGGGC CCG GCCC-GCCGCCG         TTTTCCGGCGGCGTT  67 80
        rlmB 3512510 .. 3512532 + -12.6  -3.03124   GTAAACTCTTGCAGC           GGCGCGCCGT CGC GCCGCGCGCC           TCTTCGAACGTCCGA  67 37
CXD81_RS17005 NONE
CXD81_RS17010 3514597 .. 3514611 +  -3.4  -4.66537   AAGCTAGTATTGGCG               CGGCTC AGG GCGCTG               TTTTCTCTTGACAGC  71 105
CXD81_RS17015 3515127 .. 3515139 +  -9.1  -3.64703   GGACGCAAAGGCAAA                TCGGC GCT GCCGA                TTTGCCTAACAAAAC  68 42
CXD81_RS17020 3515361 .. 3515394 + -12.4   -5.4505   AAGCAGGCGCAATAA    CCCCG-GCGAGGGCGC ATCG GCGCAC-CGCACGGGG     TTTTTTGTTGCGCGC 100 92
CXD81_RS17025 NONE
CXD81_RS17030 NONE
CXD81_RS17035 NONE
CXD81_RS17040 NONE
CXD81_RS17045 NONE
CXD81_RS17050 3521764 .. 3521776 +  -4.7  -3.69068   GGACAGGCACCCTCG                CGCGG TTG CCGCC                TATTTCTTGCCGTCC  55 98
CXD81_RS17070 3526244 .. 3526302 +  -4.3  -3.15544   GTGGCGCATTCCCAG --GGCAGCGCGCGGCCGGTCTGTGGGCTG GCG TAGCCCACCGTCCAGTGGCCCGCCGCCAA TTCGTCCGGGTGCCC  45 331
CXD81_RS17100 NONE
CXD81_RS17105 3532127 .. 3532137 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS17110 3533141 .. 3533153 +  -4.7  -3.57144   GACAGTTCACAGCTA                GCGGC CGG GGCGC                TTTGCGGCTCGGGCC  54 25
CXD81_RS17120 3535525 .. 3535553 + -13.1  -3.14564   GCTCGAAGCGCTTCT        TGTCCACGCCGCC ATG GGTGGCGTAGGCA        TTCATGCGCAGCTGC  68 275
CXD81_RS17150 NONE
CXD81_RS17155 3540977 .. 3541003 +  -6.4  -3.87373   AAGCGGCCCTCAGTG         GGCCGAGTCGAG GGC CTTGCCGTGGCC         TTTCTGGCCGATCTG  62 50
         smc 3546087 .. 3546108 +  -2.9  -3.28447   AACCCATATTCGGAT           TTGCGCTGCC TTA GGC-GCGGGA           TATTCTCATGAGTGA  46 41
CXD81_RS17170 NONE
        ligA 3549298 .. 3549327 + -19.5  -3.15663   CCCGGCAGCCGAAAA       CAAAATTGCCCGC GAAA GCGGGCAATTTTG        TTGATGGCGATGGCT 100 59
CXD81_RS17200 NONE
CXD81_RS17205 NONE
CXD81_RS17210 3553456 .. 3553472 +  -4.3  -3.05471   CCGGATTAGGGTTGA              TCCCGGT GGG GTCGGGG              TGGTTATTTGATACT  45 131
CXD81_RS17215 3554822 .. 3554845 + -19.6  -2.62735   TCTCCTGCTTCACCT          CGCACCGGCC TGAG GGCCGGTGCG           TCGTATGCGCCGTGT  93 101
CXD81_RS17220 NONE
CXD81_RS17225 3558102 .. 3558121 +  -7.8  -3.29461   CCGCGACATGGCCCG            CGCCGTCG AGCA TGATGGCG             TTGTCGAAGCCCTTG  55 392
        pncB 3569912 .. 3569929 + -14.1  -4.17048   GGTGTTCCAGCTTCC             GCCGGCC TGAG GGCCGGC              TTGTTTTCGCCAACC  91 16
CXD81_RS17295 3570412 .. 3570451 +   -18  -4.08945   CGCGCCTCGGGACGG  TACAGGCATTGCGGCATC GGCC GATGCCGCAATGCCTTCA   TTTTGCCGGGATGGT 100 114
CXD81_RS17310 3574157 .. 3574171 +  -4.2  -4.09685   CGGGGGCGGCCGCGT               GCCCTA CAC TAGGTC               TTTTGCACGCTCCGG  61 64
        argE NONE
        trpB NONE
CXD81_RS17325 NONE
CXD81_RS17330 3578452 .. 3578483 + -10.8  -4.67353   CCCGCCGGCAGTGCC      TGCGAACGCCCGGC CCAG GCCGGGCGTTGTTA       TTTTTCCATGCATGC 100 46
CXD81_RS17340 3580436 .. 3580489 + -13.7  -3.68359   CCCTTGCCGCAGCGG GGACAATTGGCGGGTGCCAGTCCCC CTGC GGGGACAGGCACCCGAGGAGTGGTC TTATGATTTTCCGGC  80 86
CXD81_RS17345 3581600 .. 3581626 + -23.8  -3.92869   GCACAGCAGGAAAAA         GCGGGTTGCGGC GCT GCCGCAACCCGC         TTTGTGCGTCAGTGA 100 66
CXD81_RS17355 3586234 .. 3586246 +  -4.1  -3.42809   CAACTGGAGACGGCC                TGACC ATG GGTTA                TTCGTTGGTGGTATT  49 23
CXD81_RS17360 3586960 .. 3587017 + -15.6  -3.27408   CTGTCTTACCTGGAT CGGCGCCATGCG-CGCGCTG--CCGTCGC CCG GCGACGGAATAGCGCGGCGCACGCCACCG TCTATTTGGGTAAGA  80 75
        msrP 3588003 .. 3588019 +  -2.1  -3.16564   AGCCTCTACCAGGGC              CTGGACC TGC GGGCCAA              TTACTGAGGTCCCCA  42 2
        msrQ 3588862 .. 3588896 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS17385 3591070 .. 3591101 +  -5.1  -4.03234   TCAGGTCGCGCACCA      GCTG-CGCCAGC CTGGCGGCC GCGGGCGTCAGC      TTTCTATGCCGCAAC  63 77
CXD81_RS17395 NONE
CXD81_RS17400 3594010 .. 3594059 + -13.5  -3.96148   GCCAGGCCACCGACG TGGC-CGCCC-GCGCCGCGGGCG AAAAGC TGGCCGCGGCGCTGGGCCAGCCG TTTATCGTGGAAAAC  84 219
CXD81_RS17410 3595121 .. 3595138 +  -2.7  -3.14132   GCCGGCCAGGCCCGC             GGCAA GATAGGCA TTGCC              TTCGTCCAGCAGCAG  43 303
CXD81_RS17420 3596456 .. 3596501 + -10.4  -3.05384   CTCATTCTTATATAA TGCGTCACGCGCTACTATTC GCCCAA GTTAAGTAGCGCGTCACGCA TTACATGGGCAAGGG  60 117
CXD81_RS17425 3599906 .. 3599916 +  -3.2  -3.59979   AATCCTATTCTTGCC                 TTCC TCA GGAG                 TTTGCCATGCCCAAC  49 39
CXD81_RS17430 NONE
        pruA NONE
CXD81_RS17440 3604127 .. 3604140 +  -5.9  -3.34947   TCGCCGCATGCGTGC               CTGGC TGAT GCCGG                TTGTGGGCCTTGTTG  52 384
CXD81_RS17450 3604969 .. 3605003 + -22.3  -3.53012   CTAGGCGCGCTGCCC    G-CAAAGGCCGCCCGG CATG CCGGGCGGCCTTTGTC     TTTGGCGCAACGCAG 100 42
CXD81_RS17455 3606068 .. 3606078 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS17465 3607061 .. 3607100 +  -9.4   -3.5361   CCTGGACAAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD81_RS17470 3608312 .. 3608325 +  -5.3  -2.83403   CCGGCGGCATGGCGA               GAAGA CCTT TCTTC                ATTTCCTGCCGCGCG  46 206
CXD81_RS17495 3614900 .. 3614930 + -12.5  -3.29144   TTGCACGACGCCCCC       GGCCACGTCGGCC AGCGC GGCCGACGTACCC       TTGTACGGCACGTGG  70 423
CXD81_RS17520 3619494 .. 3619504 +  -6.8  -3.51825   CCATCGACGCCGCCA                 TGCG GAA CGCA                 TTCTCGTTCGAGTCC  58 378
CXD81_RS17530 3622394 .. 3622406 +  -6.2  -3.60792   ACTTTCCACAGATCC                CGCC TGTCC GGCG                TTTCACCATTCGAGG  56 89
CXD81_RS17535 3622795 .. 3622815 +  -2.5  -3.13906   GTCAAGGGCGGGTCT           CCC-CCGG GGTGCG TCGGCGGG            TGGTTTTCCGTTAGC  42 46
CXD81_RS17540 3623359 .. 3623384 + -18.3  -5.42862   CCCGGCGCCGTACAC         GCCCCGCCGGCC GCA GGCCG-CGGGGC         TTTTTTTCGGCCTGT 100 51
CXD81_RS17545 3624206 .. 3624234 + -10.3  -3.55444   TAGAGTGACACCAAT       GC-GCCGGCACGG CAAGC CCG-GCCGGCCGC       TTTCCCCCATCCAGA  67 89
CXD81_RS17560 3627846 .. 3627880 +  -8.5  -2.71364   CCGCGTAGAGCTCGC    GGCTGATCACGCC-CC GGGT GGCGGCGTGCTCGGCG     TACTTGGCGCCCTGC  52 504
CXD81_RS17610 NONE
CXD81_RS17615 NONE
CXD81_RS17620 3639604 .. 3639620 + -15.1  -5.75945   TTCCGTTTTCCTCCT              GCCGCGC TCT GCGCGGC              TTTTTTTTGGGGCGT 100 55
CXD81_RS17625 NONE
CXD81_RS17630 NONE
CXD81_RS17635 NONE
CXD81_RS17640 NONE
CXD81_RS17645 NONE
CXD81_RS17650 3646492 .. 3646528 +  -9.9  -3.69395   GGGCAGCGGCCGCCG    CAGCACGGTGGCCGGCG CGG CGCTGGCCAACGCGGCG    TTGTTCCATGGTCGA  70 303
CXD81_RS17660 NONE
CXD81_RS17665 NONE
CXD81_RS17670 NONE
CXD81_RS17675 NONE
        lpdA NONE
CXD81_RS17685 3654622 .. 3654643 +  -4.3   -2.5474   GGCCTGCGCCAGCAG           CC-GTTCGGC GTT GCCGTGCAGG           ATCTTCTCCATCGCG  42 103
CXD81_RS17705 3659250 .. 3659283 +  -7.3  -3.65902   GTCAGCGGGTGCCTG     TCCCCCGTGCGGG GACAGGCA CCCGGGTGGGGGG      TTTACATGCGCTCGA  61 50
CXD81_RS17715 NONE
CXD81_RS17720 3661576 .. 3661614 +   -11  -3.20723   TGCCCGCTGCCGATG  ATGC-CCACCAGCGGCG CGAACA CGCCGGTGGTGGCGCAG   TTGAGTTCCTCGACA  64 224
CXD81_RS17745 NONE
        grxC NONE
        secB NONE
CXD81_RS17760 NONE
CXD81_RS17765 3669799 .. 3669836 + -13.3  -2.79183   CGCGAAGATGCGCGG   CGCAGCCGC-GCCGGTGG CCG CCAGCGCCTGCGGCAGCG   TGTCGTGCACCTGCA  67 293
CXD81_RS17780 3671988 .. 3672000 +  -9.1  -4.09685   GGTGTCCTGGACGCC                CTGGC CGC GCCAG                TTTTGCGCCATGGAC  72 173
CXD81_RS17835 NONE
CXD81_RS17840 NONE
CXD81_RS17845 NONE
CXD81_RS17850 3687841 .. 3687891 +  -8.1  -4.32857   GAGGACGGGCTCCCA GGGTTCGGCAGGTGCCTGTCTCC CGTGC GGGGACAGGCACCTGAGTGTCAC TTTGTCTTTGCCAGC  77 49
CXD81_RS17885 3694255 .. 3694282 +  -6.2  -3.17714   GCGGCTGTACTGATT        GTTGGCGTCGAC CAGC GTCGACAGCAGC         TTCATGAAGATTTCG  50 69
CXD81_RS17925 3703707 .. 3703719 +  -7.7  -3.61398   CAGCGCGATCGTGCC                CGTCA GGT TGACG                TTCTTGGGAAACCGG  60 299
CXD81_RS17935 NONE
CXD81_RS17940 NONE
CXD81_RS17945 3706357 .. 3706367 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS17950 3707407 .. 3707417 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS17955 NONE
CXD81_RS17965 NONE
CXD81_RS17970 3710672 .. 3710714 + -14.2  -3.33696   CATGAAGCACTGATG CGGTACG--GGGCGG-CGGCC CGCA GGCCGTCCGCCCCGCGCACCG TTCATTCCAGGCGGA  75 28
CXD81_RS17985 3714043 .. 3714067 + -14.9  -2.90075   CGCCGGTATCGATTT          CGCTGGCGGCC TGA GGCCGCCGGCA          TATGGTTCGAACGCC  73 12
CXD81_RS17990 3715625 .. 3715639 +  -2.7  -3.72576   AGGCCTGGCCGGACA               GCGGC AACGG GCCGA               TTTCCTGCAGCAAGG  53 464
        kynU NONE
CXD81_RS18020 NONE
CXD81_RS18025 NONE
CXD81_RS18030 3721634 .. 3721661 +  -3.2  -3.54424   CCCGTTCTTGATGTC        CGCGGC-GCGCGC GCC GCGCCCTGACCCG        TTTCCGACCGTCCCA  49 49
CXD81_RS18035 3722882 .. 3722896 +    -7  -2.62983   CGAAGCGCGCCAGCA               GCGCCG GTT CGACGC               TGATCTCGGCCTGCC  48 293
CXD81_RS18060 3725891 .. 3725918 + -19.2  -3.02324   GCGCCGTGTTGATTC        GGTGCCTGTCCC GACA GGGACGGGCACC         TGTGCTTTCGATCAG 100 57
CXD81_RS18075 3729065 .. 3729106 +  -6.5  -3.11634   CCGGCCGAATCGCTG TCGGTGCCGGTG-AGCGATC TGT GATCGGTGCGCCTGCACGGG TTCCGTCATCTGGGG  51 2
CXD81_RS18080 3730252 .. 3730302 + -18.9   -3.6579   GAGCGATCGACAGGG CGGCGGCGCCTGGCCGATGGCAGC CGGC GCCGCCGCCGGCCAGGCGG-GCTG TTGTTAGAATCCCTT  95 39
CXD81_RS18085 3731163 .. 3731197 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS18100 NONE
        rocF 3734343 .. 3734353 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 80
CXD81_RS18110 3735512 .. 3735526 +    -7  -3.41693   GCCCGATTTGGCGTA               GCCGGC CAC GCCCGC               TTCGTTCATGGTGGG  58 180
CXD81_RS18175 3751283 .. 3751309 +  -2.1  -3.61178   CCCTGGCTGCAGGCG         TTCCGGCCTGC CGTCC GCTGACCCGAA         TTTCCGATCCATCCG  48 5
CXD81_RS18180 3752521 .. 3752535 +  -2.7  -4.07568   GCAATACGCTATGCT               CGACG CGCGC CGCCG               TTTTCGCCGGCGCAG  59 70
CXD81_RS18185 3752976 .. 3753000 +   -15  -4.57073   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG 100 49
CXD81_RS18200 3755463 .. 3755473 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 71
CXD81_RS18205 NONE
CXD81_RS18210 3757151 .. 3757167 + -10.8  -5.10497   GGCCGTAGTTCAACA              GCCCGC CTCGA GCGGGC              TTTTTTGCGTCGGTT 100 47
CXD81_RS18215 3757573 .. 3757583 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS18225 3758576 .. 3758621 +    -6  -2.89564   TACAACCTATTGACA GTTCACACCTAACCCCCACC CGCCCC GGTAGGGGCTAGGAGATAAC TGTGTCCGATACCAA  48 14
CXD81_RS18230 3759179 .. 3759189 +  -2.4  -3.39895   GTGCAGGTAATGGCC                 CAGC TCG GCGG                 TTCGTTCATGAAGCA  46 114
CXD81_RS18240 NONE
CXD81_RS18245 NONE
CXD81_RS18250 NONE
CXD81_RS18255 3761522 .. 3761536 + -12.8  -3.02511   CCGCCTGATCTCCCT               GGGCGG CGC CCGCCC               TATTACCCACGTAGC  67 33
CXD81_RS18260 NONE
CXD81_RS18265 NONE
CXD81_RS18270 NONE
CXD81_RS18275 NONE
CXD81_RS18280 3764366 .. 3764376 +  -8.2  -3.54424   CAGCAGCTCGCCTGA                 CCGC ATG GCGG                 TTTCGAGGGATAGCA  63 406
CXD81_RS18300 3769372 .. 3769400 +  -4.4  -3.44622   ACTTCGACCGATTCC        CCGCGCTGGTTG GTCAG CGGCCAGCGCAC        TTCGTTCTGCGGGTC  49 329
CXD81_RS18315 3771602 .. 3771621 + -16.4    -3.767   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC  91 219
        dnaA NONE
CXD81_RS18345 3777232 .. 3777245 +  -2.3  -5.03145   CGCGCGCGAACGGTG               TGGCC GTGA GGCTG                TTTTTTAAGGCGTTA  79 81
        gyrB 3779752 .. 3779773 + -13.7   -4.4078   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG 100 53
CXD81_RS18360 NONE
CXD81_RS18365 3783535 .. 3783589 +  -6.3  -3.76759   CCTGCAGGCGTGCGC GAGGGGCGGCGTAT-ACTGGCTCTCGC CGC GCGAAGGCCGGCCAT-CGCCGTGCCGC TTTCCTGACCTTCAT  62 369
CXD81_RS18375 3784827 .. 3784877 +  -6.3  -3.44848   GCAAAATCTGCAAAG CGGG-CTT-GGCTACATTGCGTTC ACTGGA GATCGCA-TGAAGCCCAAGACCCG TCTTTACTACGCCGA  55 79
CXD81_RS18380 3785721 .. 3785734 +  -9.5  -3.26471   GCGTTGCAGGCCCGC               CCGGG CCGG CCCGG                TTACTATGGCCGTAG  61 40
CXD81_RS18390 3788675 .. 3788704 +  -8.7  -3.09681   ATGATGCAGTGCAAA       TATTACGTTTACG TAAA CGTAAACGTAAAG        TTGAGTCGGGTTTTC  56 487
CXD81_RS18405 3790468 .. 3790502 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 218
CXD81_RS18425 3795392 .. 3795405 +  -3.1  -2.79796   CATCAACGCCCCACG               GGTAT GCCC ATGCC                TATCATCGAATCCCG  40 117
CXD81_RS18430 NONE
CXD81_RS18435 3799072 .. 3799110 +  -6.7  -3.14931   CGCTGATCGAAGTGA  AG-TGA-ATGACGCCGGGC GCG GCCCGGCGTCGGGTCAGCC  TTGCTCCGGCGTGAC  52 21
CXD81_RS18450 3801878 .. 3801915 +    -9  -2.70932   TGCCCAGCGCCGGCG   CGGGCGCGCCG-GGCTC CACCC GCGCCACGCCGTGCTCG   TCGTTGGCGGCGAGA  52 188
CXD81_RS18460 3804096 .. 3804108 +  -6.2  -2.64155   CGTCCCGACTCCAAT                GCGC CAATC GCGC                TGCCTTTCCGCCAGG  46 70
CXD81_RS18465 3806233 .. 3806262 + -20.9  -3.29144   CGGGCGCCGACGCAA       TGCACAACCCACC GCAA GGTGGGTTGTGCA        TTCTGGACGCGGTCG 100 59
CXD81_RS18470 3808701 .. 3808720 +  -3.4  -4.07568   GAAAACGTGAAGACC            GCGCGCAG CGCA CTGCCCCC             TTTTACAGAGCCGCG  59 87
CXD81_RS18475 3809390 .. 3809425 + -16.8  -2.70525   GATGCGGCCGCGCCA    GACATGGCGCGCCGGC CCGT GCTGGCGCGCCATCGC     ATTGATTTCCGGAAC  80 39
CXD81_RS18490 3815693 .. 3815715 +  -5.4  -3.50853   GCACCGCGCGGTCCA           CGCGACCGAC GCG GCCAGTTGCG           TTATCGTTGCCGCAA  54 102
CXD81_RS18495 3816817 .. 3816827 +  -8.2  -2.82635   GCGATTCGTGCGCAA                 GGCC CGG GGCC                 TGTGATGATCGAGCT  54 10
CXD81_RS18500 NONE
CXD81_RS18505 NONE
CXD81_RS18510 3819244 .. 3819265 +  -3.5  -3.64822   AGTTCTGAGCTTGCC           CGACCCGCG AGGC TGCGCGCCG            TTTCCCTGCAGGACT  54 33
CXD81_RS18515 NONE
CXD81_RS18520 3821971 .. 3822018 +  -2.7  -3.02511   TGGCGGTGGACAACT CC-TGGATGTTCATCAGCACCGA CGCG TCGCCGCTGACGCACA-CCACGG TCTTGCCGGGATGCG  41 467
CXD81_RS18530 3824117 .. 3824133 +  -5.7  -3.28712   GATCGCGCGCCAGCG              CGGCCAG CGG CAGGTCG              TTCTCGGCCAGGCCG  52 137
CXD81_RS18540 3825823 .. 3825853 +  -8.9  -3.21063   TGTGCCGGCACTTTC      CCGC-CAGACGGGC GCTC GCGCGCCTGCGCGG       TATTGCGTTTGGCTG  56 299
CXD81_RS18545 3826860 .. 3826870 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 270
CXD81_RS18555 3827911 .. 3827959 +  -9.7  -3.03159   CGGCGCACGTCCTCT TCGGCG-CGGCC-GCTGCGCGCCAC GTA GTCG-GC-CAGCTGGTCGGCGCCGA TGTTGCCCACGTTGA  59 62
CXD81_RS18565 NONE
CXD81_RS18570 3834782 .. 3834804 +  -8.4  -4.05714   CGCGGCTGAGCCCGC          GC-CGCCGG CCAGCC CCGGCGTGC           TTTATCATTGGCCCT  72 32
CXD81_RS18575 NONE
        thiD 3836566 .. 3836576 +  -3.2  -4.21462   GTTGACTCCCCTATA                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  63 67
CXD81_RS18585 NONE
CXD81_RS18590 NONE
CXD81_RS18595 3838810 .. 3838850 +  -6.8  -3.05268   CGTGAAAAGAAGTCA CCGCGTCGACGCAGC CCAGGGCCGCCA GCAGCG-CGGCGCGG  TCTTGCACCTGATTG  48 246
CXD81_RS18605 3840468 .. 3840481 +  -3.7  -2.87132   GCGCCCTGCGACCCG               GGCGC GCCC GCGCA                TCTGTAACAGGGACG  43 97
CXD81_RS18610 NONE
CXD81_RS18615 3842609 .. 3842640 +  -4.4  -3.72576   CAGGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  55 92
CXD81_RS18620 3844020 .. 3844054 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD81_RS18635 NONE
CXD81_RS18640 NONE
        fusA NONE
         tuf 3849973 .. 3849998 + -11.1  -4.62203   AGCAGTACCCAACCA         GTGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CXD81_RS18655 3850370 .. 3850409 + -20.2  -3.53091   TGTGGCGCAGCTCGT  GAAAAATGGCCGCATTCC CCCG GGAGTGCGGCCATTTTGC   TTTGGCGCGACAGCT 100 63
CXD81_RS18660 NONE
CXD81_RS18665 NONE
CXD81_RS18670 NONE
CXD81_RS18675 NONE
CXD81_RS18680 NONE
CXD81_RS18685 NONE
CXD81_RS18690 NONE
CXD81_RS18695 NONE
CXD81_RS18700 NONE
CXD81_RS18705 3855493 .. 3855515 + -17.8  -5.84381   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG 100 70
CXD81_RS18725 NONE
CXD81_RS18730 3859590 .. 3859601 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAGTT  44 31
CXD81_RS18735 NONE
CXD81_RS18740 NONE
CXD81_RS18745 NONE
CXD81_RS18750 NONE
CXD81_RS18755 NONE
CXD81_RS18760 NONE
CXD81_RS18765 NONE
CXD81_RS18770 NONE
        secY NONE
CXD81_RS18780 NONE
CXD81_RS18785 3864686 .. 3864705 +  -2.8  -3.08812   GCGTCAAGGCTAACC            CAGTTAGCG GTA CGC-AACGG            ATTTATTCAAGGAAC  44 28
CXD81_RS18790 NONE
CXD81_RS18795 3865485 .. 3865500 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  44 3
CXD81_RS18800 3866215 .. 3866244 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  78 98
CXD81_RS18805 3867353 .. 3867381 + -21.7  -2.84218   CCGTAAGCAGTCAAG        CGCGGTGGGCGCG CCA TGCGCCCGCCGCG        ATGTTTTCATGCATC 100 35
CXD81_RS18810 3867918 .. 3867947 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCGCGCG 100 46
CXD81_RS18820 NONE
        dsbD 3870780 .. 3870833 +  -3.1  -3.04144   GCTCCTGACGTTGCT TCGTATC-GCCTCGGGCGCGC-CCG AGGCGA TGGCGTGGGCGAGAGGCTGGTACGA TGTTGCCCATACCAG  42 33
CXD81_RS18830 3872032 .. 3872042 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGGCGC  52 207
CXD81_RS18845 3874495 .. 3874521 +  -6.4  -5.14563   CCGTTGTCTATGAGG         GGGGGGAAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAACGC  90 112
CXD81_RS18850 NONE
        ccsB 3877985 .. 3878014 + -22.3  -3.54459   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 44
        cyaY 3880357 .. 3880410 + -17.3  -2.80816   CGACGTCGCTGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCACGCAGCA TATCGTCCATGACGA  78 513
CXD81_RS18880 NONE
CXD81_RS18885 NONE
CXD81_RS18890 3885441 .. 3885496 + -14.6  -5.14965   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCCGGCGGA TTTTTTCGTCCGCGT 100 120
CXD81_RS18905 3890550 .. 3890568 +   -16  -3.44848   GCTTCACCCAGTATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  82 142
         ssb 3891198 .. 3891213 + -10.4  -5.78622   CGCTGGATGCGAAAG              CCCTGC CCAG GCAGGG               TTTTTTTTCGCCTGG 100 57
CXD81_RS18915 NONE
CXD81_RS18920 3894039 .. 3894051 +  -4.8  -3.32844   GGGCTGGGCCGGGCC                GCGA TCGAT TCGC                TTATCCGCTGACCGC  49 2
CXD81_RS18925 NONE
CXD81_RS18930 NONE
CXD81_RS18935 NONE
CXD81_RS18940 3896921 .. 3896963 +  -7.4  -2.79796   GCCAGCATATGGGGC ACCTGCACCGCCACGTCGCG CGT CACGCCCAGGCGTTGCAGGG TGTCCTGCAATACGC  49 284
CXD81_RS18950 NONE
CXD81_RS18955 3900507 .. 3900537 +  -3.2  -2.63301   GGATCTTTCCTGCCA       GCAGTGTGTCTATG TAC TACATTCACACTGC       TACTCTCAGAATGTC  39 137
CXD81_RS18960 NONE
CXD81_RS18965 3902552 .. 3902575 + -17.4  -3.28712   GCCCCGCAGCGGGGC          GCGGCTGGCC GCAA GGCCGGCCGC           TTGTCGCCCGCACGC  86 59
CXD81_RS18970 NONE
CXD81_RS18975 3904694 .. 3904717 + -17.4  -3.97331   GACACGATTGTCCTG          CCGGCGGGCG AGGC TGCCCGCCGG           TTCTTTGCCTGGATT  95 44
CXD81_RS18980 NONE
CXD81_RS18985 NONE
CXD81_RS18990 3907891 .. 3907908 +  -9.9  -3.72576   TCATGATTTCCTCTT             TTCGCAC GGAC GTGCGAA              TTTAATCGAAAAAAA  71 284
CXD81_RS19035 3916459 .. 3916474 +  -4.6  -2.53382   CCGCCGATTGACAAG              CCTGGC CGGC GCTGGG               TAGATTGCGCCTACT  42 30
CXD81_RS19040 3917583 .. 3917621 + -10.9  -3.73224   AGCGGGCGCATACCT  CGCTTGAAGGCGGCGGCC GCAT GGCCGCCGTCG-CAGGGG   TTTCGTACCCCATCG  73 39
CXD81_RS19075 3922524 .. 3922543 +  -4.8  -3.35679   CCTGGCCGAAGGAGC            GGCCTGAG GCGC CGCCGGCC             TTCTCCATCCACGAA  51 19
CXD81_RS19085 NONE
CXD81_RS19090 3925683 .. 3925722 + -13.5  -2.78715   ACTGAGGCTGCGCGA TCGCCC-GC-CCGCCGCGC GTGC GCGCGGCGCCGCTGGGCGC  TATAATGCGCAACTT  67 36
CXD81_RS19095 3926296 .. 3926323 +  -8.4  -3.06831   AGACCTCCTCGAGTG        GCGCCG-TGGTGT CGA ACGCCATCCGCGC        TTGCGTGAACGTTGA  55 477
CXD81_RS19110 3928295 .. 3928326 +   -13  -2.89668   CATCCCCGACCAGCT      GACCGACTGAGCGC CGGC GCGCTCAGTCCATC       TGTATCCCGCTCTTG  69 16
CXD81_RS19165 3939990 .. 3940002 +  -5.5  -3.55622   ACCTCGCGGTGCACC                GCGTC CTC GATGC                TTTCGCCGACTTCGA  54 315
CXD81_RS19190 3944890 .. 3944902 +  -6.9   -3.7456   GCCCGAGAACGTGGC                CGGCG GCT TGCCG                TATTTCTTGGTGTAG  61 272
CXD81_RS19235 3954265 .. 3954280 + -10.4  -2.57132   TCGCCGGCAGCAAAC              TGCCGC TGGC GCGGCA               ATTCTAGGCGGCGGG  57 3
CXD81_RS19240 3955329 .. 3955339 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS19245 3956523 .. 3956542 +  -5.6  -3.90112   CACGGCGCACAGGAC            GCCGCGGCC GTC GGCCA-GGC            TTTCCTTCAGGCCGC  60 205
CXD81_RS19280 3963779 .. 3963802 +  -9.4   -3.1372   AGGCCTTGATGTCGT          GCGCCAGCGC TTCG GCGCCGGCGG           TATTGGTGGCCAGTA  59 220
CXD81_RS19310 3968030 .. 3968047 + -12.7  -3.21218   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  69 86
CXD81_RS19340 3973485 .. 3973527 +   -14  -3.23853   CGCCGGCGCCGAATC CTCCGAGGCCGTGCTGGCGG CGG CCGCCGCCGCGGCTTGCGAG TATTGCTTCCACACC  75 147
CXD81_RS19350 3977372 .. 3977419 +  -6.1  -4.63218   GCGGTCTGTCTTGCA TGCGCGG-GCGCCG-CGTACGGC GTCA GGCGGGGGTCAGCGCACCGCGCA TTTTCTTCAGCGCCG  78 397
CXD81_RS19375 3982108 .. 3982137 +   -15  -4.25104   CGGGGCGTTGCATGC       TGCCCACCCGGC CCCTGT GCCGCGTGGGCA        TTTTGCTGCGCCCGC  95 55
CXD81_RS19380 NONE
CXD81_RS19385 3988713 .. 3988725 +  -9.1  -3.18264   GCCTGTCCCCGCGGG                GACGG ATA CCGTC                TTAGTACGTACGGCA  59 101
CXD81_RS19390 3989547 .. 3989561 +  -7.8  -3.28712   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTGAGGCGCCCGC  56 5
CXD81_RS19395 NONE
CXD81_RS19400 NONE
        mlaE NONE
        mlaD NONE
CXD81_RS19415 3993835 .. 3993853 +  -5.2  -4.72386   GGCCACCGCCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  81 45
CXD81_RS19420 3994632 .. 3994643 +  -5.8  -4.07568   AGCCGCGCCGGCGCG                GCTG GAAG CAGC                 TTTTCGGCCAGCCGG  64 185
CXD81_RS19430 NONE
CXD81_RS19435 NONE
        murA NONE
CXD81_RS19445 3998395 .. 3998416 + -18.7  -2.61274   CATCGCCTGAACCCC           GCCGCCCGC GCCG GCGGGCGGC            CTTCCTTGCAGTACC  87 31
        hisD NONE
CXD81_RS19455 NONE
        hisB 4001405 .. 4001419 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCG  42 3
        hisH 4002150 .. 4002162 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  57 39
CXD81_RS19470 NONE
        hisF NONE
        hisI NONE
CXD81_RS19485 NONE
CXD81_RS19490 4004856 .. 4004871 +  -2.4  -2.90496   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAATTTCGGAGAACC  40 7
        tatA 4005128 .. 4005153 + -12.6    -3.889   CCTAGTCCCGGCCCG         GGACCGGC-CC ATGAC GGCGCCGGTCC         TTTCCTATCGTTCCA  81 36
        tatB NONE
        tatC 4006470 .. 4006495 +  -5.3  -2.52676   AAGTAGACGGTTTCA         CGCTTGCCGCGG CCG CC-CGGCATGCC         TACATTGCCGGCATG  44 65
CXD81_RS19510 4007011 .. 4007025 +  -4.2  -2.82327   TTCGCATACCAAATC               CTTGCC GGC GCCAAG               ATTTCAGTATGAGAA  43 43
CXD81_RS19515 4008234 .. 4008277 + -11.6  -2.52516   CCGTCCGGCCGGCAC CATCCCGCATACGTGTTGGC AACC GCCAACGCGCATGCGTGCAG ATTCGTCGTACAAAA  61 67
CXD81_RS19520 NONE
CXD81_RS19525 NONE
CXD81_RS19530 NONE
CXD81_RS19535 4010817 .. 4010827 +  -3.2  -3.63968   ATATTGCGAATGAAC                 CCTT CCG GAGG                 TTTCGACGTTTCCGC  53 28
CXD81_RS19540 4011576 .. 4011594 +    -3  -3.09785   CGGCAGCGTCGATAT             GTTGAGCC GCC GGCTCGGA             TCTGTTCGCCTGTCC  44 21
CXD81_RS19545 NONE
CXD81_RS19550 NONE
CXD81_RS19555 NONE
CXD81_RS19560 NONE
CXD81_RS19565 NONE
CXD81_RS19570 NONE
       virB9 NONE
CXD81_RS19580 NONE
      virB11 4019959 .. 4019969 +  -2.4  -4.29396   ACGCCTGCCGCCTGC                 ACGC ATT GCGA                 TTTTCGTGCATAATT  62 40
CXD81_RS19590 4020088 .. 4020109 + -15.9   -4.7497   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC 100 37
CXD81_RS19600 NONE
CXD81_RS19605 NONE
CXD81_RS19610 NONE
CXD81_RS19615 4025479 .. 4025511 +  -5.4  -3.02043   ATGTGCCTGCTTGCT      TTGCGCACCGGCGT CCATC GCGCCGCGCCGCAA      TCTTCCCACCGCCTT  47 209
CXD81_RS19620 NONE
CXD81_RS19625 NONE
CXD81_RS19630 4029270 .. 4029303 +  -5.2  -3.71873   CGCATCGAATTCCCG    AGCCGGCG-CGG-CAC GCTG GTGGCCGTCGACGGCG     TTTCGCTGTCGCTGG  57 75
        argJ NONE
CXD81_RS19650 NONE
CXD81_RS19655 4033973 .. 4033992 +    -2  -2.89475   GGATCCGCGGGCTGC            TCTGACGC AACG GCGCTAGG             TGTGATGTCTCAATA  40 21
CXD81_RS19660 4035063 .. 4035073 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS19665 4036112 .. 4036122 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD81_RS19675 4037300 .. 4037321 +  -3.7  -2.70932   CGCCACGCTCAGGTA           GT-CGATCAG CCC CTGCTCGTAC           TGGTTGCGCGCCAGG  40 199
CXD81_RS19715 NONE
CXD81_RS19740 NONE
        glpK 4055181 .. 4055217 +  -2.2  -3.53811   CACGCCGGCGCGCCG   GCCGCGGGGCTG-GCC AGCTGGC GGCGCAGCACCA-GGC   TTTGCGCGCCATGCA  50 138
CXD81_RS19780 4061899 .. 4061915 +  -2.2  -2.70932   CACGACACGCACGGA              GGCC AAGCATGAA GGCC              TGGTTGCGACAACAC  38 14
CXD81_RS19785 4062806 .. 4062819 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4063929 .. 4063974 +  -6.2  -3.18264   CGGCGTGCTCCAGGT TGCCGCGGTTCAGCTTGGGC AGGATCGC GCCCA-GCTGC-TCGCGGTA TTGCTCGATCAGCGC  51 280
        mutY 4068672 .. 4068682 +  -3.2  -3.28924   CCAGCCTGAAGGTGA                 TCTG CTG CAGG                 TTCTGCCGCCCGCTG  47 95
CXD81_RS19810 4070404 .. 4070414 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 144
CXD81_RS19815 4071397 .. 4071436 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD81_RS19820 NONE
CXD81_RS19825 NONE
CXD81_RS19830 NONE
CXD81_RS19835 NONE
CXD81_RS19840 NONE
CXD81_RS19845 NONE
CXD81_RS19850 4078581 .. 4078600 + -16.4  -6.06723   GGCCGAGCGTGCACG            CCGCCCCG CAAC CGGGGCGG             TTTTTTTTTCGCGCG 100 57
CXD81_RS19860 NONE
CXD81_RS19865 4081301 .. 4081326 +  -5.9  -3.61652   GACGGAAAGGCGATG         CCGGCGTCCGG CTGG CCCGCCGCCGA          TTGATTGTTTACGCA  56 53
CXD81_RS19870 4082777 .. 4082797 +  -2.4  -2.78712   AGACCAAGCCCTATC            CCAGCGAG CCATT CACGCTGA            TCGTTCCGTTCGGCG  38 209
CXD81_RS19885 4085760 .. 4085779 +  -2.8  -4.07568   GCACCGTCACGCGCT            CCAGCGTGT CGA ACAC-CAGG            TTTTCCACAGCCAGG  58 124
        mnmE 4098194 .. 4098212 +  -6.7  -2.62184   CCGCGCCGGCGATGC            GGCC-CAC GATC GTGCGGCC             TGCTATCGCGCAGCC  47 398
CXD81_RS19950 4100302 .. 4100315 +  -2.3  -3.29947   AAACCCGCCATCGCA               CGCTG AAGA CGGTG                TTGCTGTGGTGGCTG  44 49
CXD81_RS19955 4101777 .. 4101791 +  -5.7  -3.06183   TCATCCGTTGGCCTG               CGATC TGCGC GATCG               TTCCATGGCCATCCA  47 74
CXD81_RS19960 4102860 .. 4102892 + -18.4  -3.02144   AAGAAGTAAACCGAT     CGCGCGGCCGGCGGC ATGC GCCGCCG-CCGCGCA      TCTTCCCAACGGTGC  90 32
CXD81_RS19965 NONE
CXD81_RS19970 4104936 .. 4104957 + -15.9  -5.06414   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 46
CXD81_RS19980 4106766 .. 4106777 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CXD81_RS19975 4104936 .. 4104957 - -15.9  -4.65895   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 59
CXD81_RS19945 4097474 .. 4097488 -  -5.7  -4.15788   AACGTCTTCAACAAA               GTCGA TCTGC TCGAC               GCGGCGTTCCAGGGC  69 303
CXD81_RS19935 NONE
CXD81_RS19930 NONE
CXD81_RS19925 NONE
CXD81_RS19920 NONE
CXD81_RS19915 4090801 .. 4090813 - -10.5  -2.78384   GTTTCTTTTAGCACA                GCGCG CGG CGCGC                TCAGGCCTGCTGCGC  57 26
CXD81_RS19910 4089432 .. 4089452 -    -9  -3.12999   GCATGGGACATGGAA            CCGCTCCT TGTTC AGGAGCGA            TCCATTATGAAAACG  59 130
CXD81_RS19905 4088511 .. 4088521 -  -8.2  -2.57344   GACGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTGCG  52 8
CXD81_RS19900 4087403 .. 4087416 -  -2.4  -2.86676   CCGAGGAATCGAAAC               GATG CGCGCC CATC                TCAGCTTCCCTGCGC  40 26
CXD81_RS19895 NONE
CXD81_RS19890 4085684 .. 4085713 - -22.9  -3.48593   GACGCCGCGACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       GGCGGCATTCAGCGC 100 34
CXD81_RS19880 4082898 .. 4082930 - -10.6  -4.17762   GATCGTGGAAAACAA     GGCTG-GCGCCAATG GCAT CATCGGCGCGCAGCA      TGCGAAGAAGGCGAC  89 235
CXD81_RS19855 4078197 .. 4078209 -  -9.1  -3.01791   ACGGCGTCCTGAACA                TCGCC CGC GGCGA                CCGGGTCCGGATGAA  55 446
CXD81_RS19805 4068229 .. 4068259 -  -5.2  -2.52896   CCATCCCCGAACGCA       GCACGGCCATGCTG GTG CTGCACGGCCCCGA       CGGCATCCTGCTGCA  42 379
CXD81_RS19775 4059800 .. 4059817 -  -2.5     -2.97   AAATCAATCTACAGA             GTCGGAC GTTC GGCCGGC              GCGGACGCGCCGGCC  41 112
CXD81_RS19770 NONE
CXD81_RS19765 NONE
CXD81_RS19760 4056655 .. 4056689 -  -2.7  -3.53811   GCGATCCGCCGGAAA    GCCCGGCGCCAGCG CCGTTTCC CGCCGCC-CCGGCC     CGCCGCCTCAGTGCA  49 33
CXD81_RS19755 NONE
CXD81_RS19750 4054741 .. 4054754 -  -8.1  -3.14132   GCTGTCGTGCATGAA               TGCCG ACAG CGGCA                TCCCGCTGTCCGAGC  53 358
CXD81_RS19735 4051768 .. 4051795 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  43 42
CXD81_RS19730 NONE
CXD81_RS19725 4049976 .. 4049991 -  -7.6  -2.57132   GCCTGCGCCGAGAAG              CTGTCA AATT TGACAG               GATCTGCCGCGGCCG  50 45
CXD81_RS19720 4049293 .. 4049343 -   -11  -2.50935   ACGCCACCCAGGAAC GCCCGCCCCGCGTGCTGCTGCT CGACGGC AGCGGCAACATGCGCGCCGAGC TGGTCATGACCGCCA  58 248
CXD81_RS19710 NONE
CXD81_RS19705 NONE
        zapD 4046087 .. 4046101 -  -5.6  -3.55071   CCAGACCGGCCCAAA               CTGGCA GTT TGCCGG               GCGCTGCTGAAATAG  54 137
        mdtA 4044768 .. 4044797 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  52 10
        mdtB 4041704 .. 4041726 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  42 16
CXD81_RS19685 NONE
CXD81_RS19680 4036923 .. 4036957 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS19640 4029467 .. 4029496 -  -9.9  -3.16191   CGACACCTTGAGCAA       CGCCGAGCAGCGCA AGG TGCGCGGC-CGCCG       CATCGGCATGATCTT  62 140
CXD81_RS19595 4020088 .. 4020109 - -15.9  -3.91144   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC  91 66
CXD81_RS19370 NONE
        fghA 3979155 .. 3979186 -  -4.3  -4.08706   CGCCCAGTATATAAA      GCGGCCCGGGC CCGGCCTGTT ACCCCAGCCGC       TCGACGTGAAACCGG  62 13
CXD81_RS19360 3978377 .. 3978396 -    -2  -3.53012   CTGCGCCGCGCCAAA            GTTCCGGA ATTT CCCAGTAC             GCAGGATATTTTTCT  48 54
        rpoH 3977345 .. 3977364 - -13.6  -5.40474   AGGCCCCCAAAAAAA            CAGACCGC CGTA GCGGTCTG             TCTTGCATGCGCGGG 100 55
CXD81_RS19345 3973050 .. 3973065 -  -8.2  -3.66666   GCGAAAACCTGGAAA              CCGCGC TGGT GCGCGA               ATGCGGCGAAGAAGC  63 427
        coxB 3971089 .. 3971121 - -13.4  -3.22858   CCAACTACAGGAACA     GCAGCGG-GGCGCGC TTCA GCGCGCCTCCACCAC      GTCCTTGGGTTGGAC  73 8
        ctaD NONE
CXD81_RS19325 NONE
CXD81_RS19320 NONE
CXD81_RS19315 3968030 .. 3968047 - -12.7  -3.33696   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  71 57
CXD81_RS19305 NONE
CXD81_RS19300 NONE
CXD81_RS19295 NONE
CXD81_RS19290 NONE
CXD81_RS19285 3963618 .. 3963644 -  -8.7  -2.87132   TTGGGCGTCCACAGA         TATCGGCCCCC CATGC GGGGACAGATA         CCGTCTTGGCAGTCA  54 137
CXD81_RS19275 3962490 .. 3962505 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CXD81_RS19270 3961633 .. 3961662 -  -2.6  -3.31322   GCGAAGGTTCGATAA       GCGCGACGATTC CAGGGC GTGCCGGCGCGC        TACGGCTTGTCCGCC  44 25
        glmU NONE
CXD81_RS19260 3958739 .. 3958770 - -10.8  -3.04322   TGCAACCTCGCAATA      CGCGGCGTCAGCGGA CCA TCCGCCG-CACTGCG      GGCATTATAGAAGTA  62 87
CXD81_RS19255 NONE
CXD81_RS19250 3956140 .. 3956174 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS19230 3952555 .. 3952565 -  -8.2  -5.15634   CACTCTAGGAAAAAA                 GCGC GGC GCGC                 GAAAATAATTAAAAC  95 203
CXD81_RS19225 3951114 .. 3951145 -  -8.6  -2.56596   TGGGTGACGAAGGGA      TGCGAGGGCCG-CCG TGG CGGCCGGCCCTCATT      CGGAGGTGGCGGTGC  52 21
CXD81_RS19220 NONE
CXD81_RS19215 NONE
CXD81_RS19210 NONE
CXD81_RS19205 NONE
CXD81_RS19200 NONE
CXD81_RS19195 3944279 .. 3944293 - -11.4  -3.90112   TGGCGGCCAAGGAAA               CGCTGG CCA CCAGCG               ACCTCAACACCGAGC  77 391
CXD81_RS19185 NONE
CXD81_RS19180 NONE
CXD81_RS19175 3940492 .. 3940503 -  -2.2  -3.18389   GGAAGATGAAAATCA                CGAA ACAC CTCG                 TTCATGCAGGCCCGG  42 95
CXD81_RS19170 3939609 .. 3939654 - -14.5  -3.70902   CGCGCGAGACCGAAA GCCCGGGTTTCCGGCAGCGCG TCGC CACGCAGCTGGCCACCCAGGC CACCCAGGCCATCCA  88 96
CXD81_RS19160 NONE
CXD81_RS19155 NONE
CXD81_RS19150 NONE
CXD81_RS19145 3934339 .. 3934352 -  -5.2  -3.10611   TTTACCCGAAGAAAC               GGGC CAGCAC GCCC                TGCCGCGGATGTCGG  49 382
CXD81_RS19140 NONE
CXD81_RS19135 NONE
CXD81_RS19130 NONE
CXD81_RS19125 3930578 .. 3930588 -  -8.2  -2.70932   CTCTGTCTGCAATGA                 GGGG GCG CCCC                 GGGTTCAGCGCCCGT  52 30
CXD81_RS19120 3929337 .. 3929352 -    -6  -2.55606   CTATATAGGATGAAT              GGGGTG CCTG CCCCCC               TGGGGACAGATACCG  46 163
CXD81_RS19115 3928171 .. 3928187 - -10.8  -3.19602   CGGGCTACACCAAGA              CGCCGC CCTAC GCGGCG              GGCATCGCCCTGCAG  64 155
        trmB NONE
         pip NONE
        thiS NONE
        lysM NONE
CXD81_RS19050 3918464 .. 3918477 -  -5.9  -2.87931   GCCAGGTGCGACAGA               CCGGC GCGG GCCAG                GACGCGGCTGACGGT  48 330
CXD81_RS19030 3914582 .. 3914601 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TTGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CXD81_RS19025 3913519 .. 3913533 -  -2.8  -3.01924   GATTCGCCCGCAAGA               TCCC ACCAATG GGGA               GTTGGGAACGCGTCT  42 101
CXD81_RS19020 3913100 .. 3913132 - -18.5  -5.81412   CGGAGGCAAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTACGGCTGCG 100 63
CXD81_RS19015 3911380 .. 3911408 -  -7.4  -3.53012   GCGCGCTGCTCGAAA       GCGAATCGGC-CC GGCT GGCGGCGATCCGC        GGCACGGACGCCGAC  60 434
CXD81_RS19005 3908602 .. 3908625 -   -21  -2.71364   GCAGCCCGGCAAGCA          GGCGCCCGCC GGCA GGCGGGCGCC           TGGCGGCGTCAGCGC 100 34
CXD81_RS19000 3907924 .. 3907940 - -15.1  -5.53288   TTTAATCGAAAAAAA              CCGGCGC CCG GCGCCGG              ACCATGACTGCGTTC 100 39
CXD81_RS18995 3907641 .. 3907678 - -16.9  -2.65174   AAAATAAGTAATCTA   CCCGGGAGCCTGTCCCC GCAT GGGGACTGGCTCCCGCC    AACTTCAGCCGTCAG  80 104
CXD81_RS18945 3896253 .. 3896279 -  -9.2  -2.52516   CGCGGCACGACGAAG         CCGCCGCCACGC TAG GCCAGGCGCCGG         GGGCGCAGCTGTATC  51 513
        uvrA 3886198 .. 3886232 -  -2.8  -3.01712   GGCCTGGCGGCAAGA    TAGGGGGG--CGGGCG GTTCG CGTCCGTGCCGCCCTA    GTCTAGCGCCGTTTG  42 28
CXD81_RS18895 3885339 .. 3885362 -  -8.9  -3.53012   GGCGGCTGTTCGAAA          TGGGCTGAGG GGCTG CCTC-GCCCA          TGCGGCCTACCCCAA  62 183
CXD81_RS18875 3879595 .. 3879620 -  -2.4  -3.70149   TCGACAGTATCGAAA         GCCAGGCGGAC GATTG GGCCGCA-GGC         CTGGATGTCGATATC  53 331
CXD81_RS18865 NONE
        lysA 3877985 .. 3878014 - -22.3  -3.53012   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 48
CXD81_RS18840 NONE
        hemB NONE
CXD81_RS18815 3867352 .. 3867382 - -15.3  -3.13164   CCCGTAAGCAGTCAA       GCGCGGTGGGCGC GCCAT GCGCCCGCCGCGA       TGTTTTCATGCATCG  78 453
CXD81_RS18715 3856520 .. 3856540 - -15.4  -4.72272   GCCGGCCATGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCCTGAGCCCGG 100 50
CXD81_RS18710 3855493 .. 3855515 - -17.8  -3.72576   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG  93 125
CXD81_RS18625 3843830 .. 3843851 - -15.1  -3.14132   TCTGTTCTTCACCAA           GGCCACGCC TTCG GGCGCGGCC            TAGCTGTGAACTGTC  76 25
CXD81_RS18600 3838247 .. 3838278 -  -2.2  -4.68103   CCAACTGGAACAAAA     GGC-CCGCCACGAC TTCGAG GACGC-GCGGCGCC      AGGCCGTGCAATCGG  76 357
CXD81_RS18560 3827671 .. 3827705 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS18535 3823968 .. 3824017 -  -7.9  -3.91084   GCAGCCTGAAGGAAA CCCGGCTGCCGC-TCACGCC-GCC GCCCG AGCAGGCATGACGCCGC-GCCAGG CCGTTCAGGTCAGCA  68 30
        ilvB 3821477 .. 3821516 -  -4.9  -3.76224   TGGCCAGCGACGAAA CCGCC-TTCATCACC-GGC GCCT GCCTGGAGGTGGATGGCGG  CCGCTGCGTGTAGGC  58 94
CXD81_RS18485 3809886 .. 3809939 -  -9.4  -3.25823   CTGGGGCCACAGCAA CAGGACGT-GGCGGCCGCGGTCGGCG ATTT CGCCCTGCGCCGC-GCCGACGGCCTG TGGGCCTACCAATTG  61 390
CXD81_RS18455 3801385 .. 3801412 -  -8.4  -3.25823   CCTGCCGCACATCAA        GACCGGCAA-GGC CGT GCCGCTGGCGGTC        ACCACCGCCGGCCGG  59 351
CXD81_RS18445 3799336 .. 3799357 -  -4.3  -3.05596   GACGCCGGGACGGAA           GTCCTGCAT CGCC ATGCCGGCC            CCGTCCTTACTTGCG  45 32
CXD81_RS18440 3799078 .. 3799102 - -17.1  -3.20991   TCGAAGTGAAGTGAA          TGACGCCGGGC GCG GCCCGGCGTCG          GGTCAGCCTTGCTCC  84 28
CXD81_RS18410 3790224 .. 3790268 -    -2  -3.17723   GTATTTCGAAGGCAA GCTCAAGCGCCGCACCGATGCC GAC GGCATCG-TGCGTTTCCAG-GC GGCGTAGCGGGCGCG  42 56
CXD81_RS18400 3788677 .. 3788702 - -13.5  -3.38522   GATGCAGTGCAAATA         TTACGTTTACG TAAA CGTAAACGTAA          AGTTGAGTCGGGTTT  75 91
CXD81_RS18355 3779752 .. 3779773 - -11.5  -3.57144   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG  72 95
        rpmH 3774120 .. 3774136 -  -2.1  -2.78384   TCCGCCTGGATTAGA              CGGCCAG ACG CTTGCGG              CCCTTGGCGCGGCGG  38 4
CXD81_RS18330 3773619 .. 3773663 -  -2.8  -4.12902   GAAGTACCGGTAAAA CCGGATCGGGGCGATAAGCAG TCTC CTGATCATCGCGCT-ATCCGT GTGAAGTGAGCATCT  59 10
        yidD NONE
        yidC 3771602 .. 3771621 - -16.4  -5.55664   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC 100 43
CXD81_RS18305 3769040 .. 3769085 - -14.8  -2.78384   CGGCGCCGCAGGACA CGGCCG-AGGTCGCCGGCCGCAA GGC CTGAGGCCGGC--CCTACGGCCG GGCCGTGTCGCTCTG  72 17
CXD81_RS18295 3766389 .. 3766415 -  -7.1  -2.82516   CCCTGTACGACCAGA         GCGCGCCGGCC GACGA GGCCGAGGCGT         TCCGGCGCAGCGGCT  50 68
CXD81_RS18285 3763582 .. 3763614 -  -3.3  -3.28791   ATGTGCGGCCCACAA     GTACGGCGGGATTG AGGCCG CCA-CCCGCCGCGC      CATCGTCCGTGCCGC  47 393
CXD81_RS18195 3753962 .. 3753977 -  -8.2  -3.09273   GCGCGCCAATAGATA              GGCCAC CACA GCGGCC               CCCACCAGGATCAGG  56 199
CXD81_RS18190 3752976 .. 3753000 -   -15   -4.2828   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG  95 52
CXD81_RS18165 3749372 .. 3749387 -    -6  -3.15579   CCAACGCCCCAGCAA              GCGGCG TGCC CGACGC               TCGCGGAAGATCCGC  51 71
CXD81_RS18160 NONE
CXD81_RS18155 3748918 .. 3748934 -  -3.5  -5.00616   TTGCGTTTGAAAAAA              TCGCCTG CGC CCGGCGC              GATGCCGGACAGCGT  81 127
CXD81_RS18150 3741647 .. 3741683 - -11.3  -3.09785   GCATACGCCAATATA    GCCGCAATGCCGGCCGC CGA GCGGCCGGCCCGGCCCC    CGGTCAATACGCCAC  64 29
CXD81_RS18145 3740946 .. 3740961 - -11.8  -5.10461   CGCACGCAAGAAAAA              CGGCCC GCAA GGGCCG               TCTCAAAACGTGGGC 100 118
CXD81_RS18140 NONE
CXD81_RS18135 NONE
CXD81_RS18130 NONE
CXD81_RS18125 NONE
CXD81_RS18120 NONE
CXD81_RS18115 3734832 .. 3734848 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD81_RS18095 NONE
CXD81_RS18090 3730891 .. 3730909 - -10.3  -3.07222   AGGAGCACCTGAAGA             TCCTCGC GGCCT GCGAGGA             AGGCAATGCCGCGCG  59 110
CXD81_RS18070 NONE
        rimO 3725502 .. 3725521 - -11.4  -3.28712   TTGGCTGCGCTACAA            GCGCCACG CCTT CATGGCGC             GCGGCTTGAGCGCCG  66 434
CXD81_RS18055 NONE
CXD81_RS18050 NONE
CXD81_RS18045 NONE
CXD81_RS18040 3722560 .. 3722580 - -11.8  -3.36492   GCTGGAATTGCAGAA            GGCCGGCG GCAAG CGCCAGCC            GGTGGACGTCTTCGT  66 82
CXD81_RS18010 NONE
        dprA NONE
CXD81_RS18000 3715706 .. 3715734 -  -4.3  -3.20723   TGTTCATGAATGGAA        CGGGCGATGCGGC GAG GCCGCGTAGCATG        AGGAGGGCGTATGGG  47 131
CXD81_RS17995 3714973 .. 3715009 -  -2.2  -4.28254   GCTCAAGAGCGAAAA   CCCCAACGT-GCGCCGCA TCC TG-GGCGTGACGCCGGGC   GCCGGCGCCAACCTG  65 237
CXD81_RS17975 3710426 .. 3710451 - -10.3  -3.35679   CGTCGTCACCGAGAA         CGGCGTGGCGC AGAT GCGCCAGGTCG          ACGGCGTGGCCGTGC  63 290
CXD81_RS17960 3708218 .. 3708252 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS17930 3703367 .. 3703381 -  -8.5  -3.14132   CCTGCGCTGGATCAA               CCGCC TGTGC GGCGG               CATGCTGGTCGTGCT  56 123
        rsmB NONE
CXD81_RS17915 NONE
CXD81_RS17910 NONE
CXD81_RS17905 NONE
        trkA NONE
CXD81_RS17895 3694805 .. 3694831 - -11.4  -2.70232   CTGAATAGTACACCA         CCGCGCGGGCAG CGG CCGCGCGCGCCG         CTATTTGCGCCAGAA  62 26
CXD81_RS17890 3693804 .. 3693846 -  -3.2  -3.14344   GACCCGCGCGAGGAA TTCCATGCAGCCTGGCATGC GCC GCACGCCACGCTGGTCGCCA CCATGCCGGACGACA  45 398
CXD81_RS17880 3692306 .. 3692341 -  -2.3  -3.54424   CGGGACGCGCCGAAA    CCCTTGCCATGCGGG ACTTTA CGCGCCCGGCCAGCG     ACCCGCGGCAGTCCG  48 167
CXD81_RS17875 NONE
CXD81_RS17870 3690136 .. 3690182 -  -8.6  -3.53224   CAGCGCGCGCGCAAA CGCCAGCAGGTCCTCGGCCTG CACATC CAGGCCATAGTCCAGCTG-CG GCCCCGACTGCGACA  62 262
CXD81_RS17860 NONE
CXD81_RS17855 3687624 .. 3687635 -  -7.2  -3.68351   GCGTCACCAGCGAAA                CGCC AGAC GGCG                 AGATCGCCGCATCCA  64 278
CXD81_RS17830 NONE
CXD81_RS17825 NONE
CXD81_RS17820 NONE
CXD81_RS17815 NONE
CXD81_RS17810 NONE
CXD81_RS17805 NONE
CXD81_RS17800 NONE
CXD81_RS17795 NONE
CXD81_RS17790 3673415 .. 3673434 - -13.6  -4.52589   TTCCCTTAGATAAAA            CGGGCGTT ACCA AACGCCCG             GCAGGTAACCACTAT 100 37
CXD81_RS17785 3671742 .. 3671756 - -11.4  -3.09635   AGCCTGAGCATCGAA               GTGGCC TAC GGCCAC               GCCTGGCGGGCGCCG  62 125
CXD81_RS17775 NONE
CXD81_RS17770 3669131 .. 3669152 - -10.1  -3.05384   GCTTTCCGCAGGTAA           TCACCGCCA TCAT CGGCGGCGA            CGTGCACGCCGGTTT  59 423
CXD81_RS17740 NONE
CXD81_RS17735 NONE
CXD81_RS17730 NONE
CXD81_RS17725 3661174 .. 3661208 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS17710 3659239 .. 3659275 - -23.8  -2.71693   GAGGAAGGAAAGTCA    GCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGG    GTGGGGGGTTTACAT 100 35
CXD81_RS17695 NONE
CXD81_RS17690 3654547 .. 3654578 -   -15  -2.60075   GCGGGTCGAATGAAG      GCAGCCGCGCCGCC CGAG GGCGGCGCGTTCGC       ATGAGGACGAGGCCC  71 45
CXD81_RS17605 NONE
CXD81_RS17600 NONE
CXD81_RS17595 NONE
CXD81_RS17590 NONE
CXD81_RS17585 NONE
CXD81_RS17580 NONE
CXD81_RS17575 NONE
CXD81_RS17570 NONE
CXD81_RS17565 3627162 .. 3627190 -  -3.7  -3.31726   GGTCGCCACAGAATA       CCTGCGCGCTGG TCCAGG CCGGCGC-CGGG        GTGGCGCTGGTGGAC  47 199
CXD81_RS17555 3625278 .. 3625288 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS17550 3624206 .. 3624234 - -10.3  -2.57026   TAGAGTGACACCAAT       GC-GCCGGCACGG CAAGC CCG-GCCGGCCGC       TTTCCCCCATCCAGA  57 65
CXD81_RS17515 3617726 .. 3617770 -    -4  -2.87132   GGGTCGGCCGATACA TCGCAGGTA-TTGCCGCCGCG CGGC CGCGGCGTCATCCGCCGGCGG CCCCCGCGCCACGCC  43 12
CXD81_RS17510 NONE
CXD81_RS17505 NONE
CXD81_RS17500 3614388 .. 3614433 -  -8.9  -3.32769   GGCCGAAACCATCAA GGTCGGCATCGCCCTGGCCGTG CAT CCCGAC-AACGCCACGCCGACC ACCGCCAACTTCGTC  59 105
CXD81_RS17490 NONE
CXD81_RS17485 3611139 .. 3611161 - -10.4  -4.69622   AGACAAGGGGAAAAA           TCGCTGCGCC GGC GGCGCGGCGT           GCGGACGACGCTAGG  93 36
CXD81_RS17480 3609690 .. 3609705 -  -2.6  -4.08216   GTATTGCGTGGAAAA              CATG-AG CTA CTACATG              GTGTCGCGCTTCCTG  58 233
CXD81_RS17445 3603745 .. 3603760 -    -6   -3.5774   ATCGAATCGTGGAAA              CCGCTG TTCG CCGCGG               CGCTTTGAGCGGTAA  56 63
CXD81_RS17415 3594425 .. 3594446 -  -5.7  -3.30771   GCACATTCCGTACAA           GGGCAGCGC CGCG GCGCTTACC            GATGTCCTGAGCGGG  51 409
CXD81_RS17390 3590959 .. 3590988 -  -7.7  -3.14132   GCCGGGGTGTACGAA       GAGCTGCTGGGCG TGTG CGGCGAGCGGCTC        GCGGCGCTCAGGCAG  54 33
CXD81_RS17380 NONE
CXD81_RS17375 3588601 .. 3588621 -  -3.1  -2.77192   AAGGCCGGCAAGAAC            GATCTGCAG CAG CCGCTGCTC            TATGGCTCGGTGCTG  39 97
CXD81_RS17350 3581600 .. 3581626 - -23.8  -4.79223   GCACAGCAGGAAAAA         GCGGGTTGCGGC GCT GCCGCAACCCGC         TTTGTGCGTCAGTGA 100 34
CXD81_RS17305 NONE
CXD81_RS17300 3570029 .. 3570066 -  -8.3  -3.28924   CATGGCTGTCTACAA   CGGCGTGGCCTACCTGG CCGG CCAGGTACCCGACGACG    CCTCGCTGGACATGG  59 441
CXD81_RS17285 NONE
CXD81_RS17280 3567373 .. 3567416 -  -3.1  -4.58685   AAATGTTGTGAAAAA GCGA-CCCCCTCATGGC-GGA TTCC CCCTGCCATAGGGGGGATTAC CAGTAGTTTTCGACC  71 22
        phaZ 3566003 .. 3566018 - -11.8   -4.2687   CGTAAAAAGCAGAAA              CGGGCC AGGC GGCCCG               TTGCAGGGAGCGCGC  91 48
        rsxB NONE
         nth 3564615 .. 3564629 -  -3.4  -3.88985   AAAACGCTTCAGAAA               CCAGGG TTT CCACGG               TGTTTCCCACGATGT  56 108
CXD81_RS17260 NONE
CXD81_RS17255 NONE
CXD81_RS17250 3561676 .. 3561686 -  -8.2  -2.52516   TGCCGGATGAGCAAG                 GCCG TGT CGGC                 TTCCTTCAGGAGGTT  51 39
CXD81_RS17245 NONE
CXD81_RS17240 NONE
CXD81_RS17235 NONE
CXD81_RS17230 3557737 .. 3557771 - -30.1  -3.09516   GCGCCCAGGACTGAA     CGCTGGCGGCGCGGC CTGGC GCCGCGCCGCCAGCG     TGCGCGCGGGTCAGC 100 36
        msrB NONE
CXD81_RS17190 NONE
CXD81_RS17185 NONE
CXD81_RS17180 3549298 .. 3549327 - -19.5  -4.13767   CCCGGCAGCCGAAAA       CAAAATTGCCCGC GAAA GCGGGCAATTTTG        TTGATGGCGATGGCT 100 47
        lplT 3540690 .. 3540718 -  -6.5  -3.74747   CCAAGCCCGAGGAAA        TCGCCGCCTGCAG TCC CTACCTGCGGCGC        CAGATTGCCCTGCTG  61 278
        ompR NONE
CXD81_RS17140 NONE
CXD81_RS17135 3536505 .. 3536515 -  -4.6  -3.10677   AATTAAGGCAGGCAA                 GGCC TCA AGCC                 CTAAATTCTACGCTA  47 38
CXD81_RS17130 3535892 .. 3535908 - -10.8  -3.95584   TCTGGAGCAATGAAA              GCCCGG ACGAG CCGGGC              CGGGGAAATTACAGC  79 34
CXD81_RS17125 3535276 .. 3535328 - -15.5  -2.79188   GAGGGAAGGGAATGA GTGCCGG-C-CCCGCGCAGG-GGCCG GCTG CGGCCGCCGGCGGGGGAGGCCGGCGC ACCGCGGGGGGCGCT  75 40
CXD81_RS17115 3532616 .. 3532632 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD81_RS17095 NONE
CXD81_RS17090 3528864 .. 3528890 -  -8.7  -3.53012   CTGCGGTGCGCCAAA        GCGCGC-CGC AGGCCGGG GCGGGCGCGC         CTATTCGAGCTGGAT  62 26
CXD81_RS17085 3527783 .. 3527819 -   -16   -4.2558   GATTGTCCAGGAAAA   CGCGCCAATTCCCGC TTGATTGG GCGGGA-TTGGCGCG    CAATGGGCAGGCGCC  95 41
CXD81_RS17080 3526894 .. 3526904 -  -2.4  -3.01497   GCAGCCGAAAGCATA                 GCCG TTC CCGC                 TCCGGCCGCCTTACT  41 84
CXD81_RS17075 3525460 .. 3525492 -  -3.2  -4.72272   GTTCTCCACGAAAAA     GGGGGCG-GAACCGG AGGG CCGGCGCGCGCCGGC      GGCGTGCGCCGGCCG  75 476
CXD81_RS17065 NONE
        argF 3523155 .. 3523177 -  -6.3  -2.58714   TTTGACAGCAACGGA           CCGTCAAAC AAGAA GTCTAACGG           GGCATTTTAGCGCTT  46 112
        argG 3521731 .. 3521760 - -23.7  -4.08394   ACACCTGCGGCAAAA       GGGTGCCTGTCCC GGCA GGGACAGGCACCC        TCGCGCGGTTGCCGC 100 41
CXD81_RS16990 3508671 .. 3508707 - -20.4  -3.34398   GCGGCGCGGCAAAGA   GAAAGCCCCGG-CAATC ATGC GATTGACCGGGGCTTTC    ATGAAGGCAGGCCAT 100 60
CXD81_RS16980 3507735 .. 3507757 - -12.7  -5.63517   GGCGCAAAGAAAAAA          CCCCGG-CGC TTGC GCGACCGGGG           TTTTTGGGCACATCA 100 65
CXD81_RS16970 NONE
CXD81_RS16965 3504782 .. 3504792 -  -4.6  -2.92371   ATGGAGGCAACCATA                 CCAG ATG CCGG                 TTTACGGCTGGCTGG  44 53
CXD81_RS16960 3503038 .. 3503048 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
        egtD 3498347 .. 3498361 -    -7  -2.71011   ACGGGCGGGTAAGCA               GGCCGC GCT GCGGAC               GTGGGTGGCGGGCGC  48 366
CXD81_RS16930 3497149 .. 3497180 - -20.4  -4.37886   TCATCGCGCACAAAA      CAAAATGCCCGCAA GCGA TTGCGGGCATTTTG       TTTTGAATTCTCTGG 100 38
CXD81_RS16915 3495658 .. 3495698 -  -5.8  -3.58536   AAATTGACGGCCAAA  GCCGCCTCAGTCCCCGCG AATGG CGCGCCGGCCGCGGCGGT  AGACTGGCGCAGCCT  57 309
CXD81_RS16905 3494889 .. 3494944 - -13.9  -4.11216   CCGTTACGGTTAAAA GTCGCCCTGCGCGGCCCTGGCGCCGA ATATG TCCACGATAGGG-CGCGCAGGGCATC AATAGGCAAGACTGG  85 77
CXD81_RS16900 3493393 .. 3493403 -  -8.2  -3.14132   CCGGCCGCTGACGAA                 GCGC GCC GCGC                 TAGTGCTGGCCGGAC  56 25
CXD81_RS16870 3487490 .. 3487509 -  -8.6  -3.68222   TGCGAATCTGAATAA            TGCGAAGC ACGC GCTTCACA             ATATGCATATAGGCA  65 139
CXD81_RS16865 3487153 .. 3487174 -  -3.6  -3.86015   TATTGGGCGGATAAA           GGGCCAGCC CGGAT GGC-GGCCG           CCGGACCGCCGGGAT  57 65
CXD81_RS16860 3485996 .. 3486010 -  -2.7  -2.69151   TGGCTTCAGATACTA               CGGGG CTCAT CGCCG               CACTCCTGGCAGGAA  40 82
CXD81_RS16855 NONE
CXD81_RS16850 NONE
CXD81_RS16845 NONE
CXD81_RS16840 3482112 .. 3482127 -  -7.5  -2.87132   CCCCCCTCGCAGATA              CGGCG CCTTGC CGCCG               GGGCGGCGAGACCGG  52 139
CXD81_RS16835 NONE
        groL 3479859 .. 3479882 - -19.6  -4.86621   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTTGGGAAG 100 87
CXD81_RS16820 NONE
CXD81_RS16815 3475114 .. 3475127 -  -9.5  -3.53012   CGGCGCGCTTGGAAA               CGGCG GCGC CGCCG                CTCAGTCCAGGACGA  64 27
CXD81_RS16810 NONE
        pyrF 3472890 .. 3472925 - -20.4  -2.59748   CACCCTGAGAAGTCA    GCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGG     GGGGTTACGTTCTTA  95 30
CXD81_RS16770 NONE
CXD81_RS16765 NONE
        phnD 3465247 .. 3465284 - -11.3  -3.02511   TGTACTCCTGGAACA   CCATGCCGATGCGCCG GCGCGCG CGGCGCAGCGAC-TGG   CCGCGCACGCGGGCC  62 261
CXD81_RS16750 3464070 .. 3464101 -  -6.7  -3.78329   GTCGAGCAATTGAAA      GGCGCGTTCGAT GTCGGCCGG ATCGAA-GCGCC      GCATCCAGGTATTGA  64 101
        phnE NONE
        phnE 3461832 .. 3461852 -  -3.9  -3.59979   CCCGCCGAGCCGAAA            GCCTAGGAT AGT ACCCAAAGC            TAACCCGGAAATTGA  51 166
        rsmD NONE
CXD81_RS16715 NONE
CXD81_RS16710 3457471 .. 3457495 - -15.7   -3.9941   TGGCCGACAACGAAA          GCGCGCCGG TGACAGG CCGGCGCGC          CGCGAGGGGGGGAGG  91 59
        benE 3456286 .. 3456312 - -12.2  -3.57144   TGCCGGATCCTGAAA         GTGCACCCCGAC ATG GCCGAGGTGCGC         TGGCCGTCGTAGGCC  74 45
CXD81_RS16690 NONE
CXD81_RS16685 3452112 .. 3452128 - -13.7  -4.72272   GCGGCCCACGAAAAA              GCCCTCC AGC GGAGGGC              TTTTTTTCTGAGGCG 100 49
CXD81_RS16675 3449717 .. 3449759 -  -3.3  -3.66874   TCAACCGCATCGAAA CCGACTATGCGCG-GCGC TATCAGGC GCGCGCGCGCGTGCTCAG GCTGACCGACGGCGA  51 504
CXD81_RS16640 3439487 .. 3439501 -    -7  -3.41636   AAGCAAGGCAAGGAA               CGCGAC GAG GGCGCG               CCCGGAACGTCGGCG  56 172
CXD81_RS16635 NONE
CXD81_RS16630 3437369 .. 3437412 - -10.9  -2.57344   CAGTCTTGCGACAAT CGGCACGGCAGTGGGGGCGGC CGGG GCCGCCCGC-CGGGC-TGCCG TCAGTTGAGGTTGAT  59 26
CXD81_RS16625 NONE
CXD81_RS16620 3434800 .. 3434810 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 110
CXD81_RS16615 3433604 .. 3433617 -  -3.7  -2.71791   AGGTCTTGTTGAAAC               GCCGG CCGG CCCGC                TGCAGGAAGGGCCTG  41 204
CXD81_RS16605 3433303 .. 3433331 -  -3.8  -5.55769   GGCTACAAGAAAAAA       GGAAGCACGGCAG GTAA CCGCTA-GCTTCC        CTTTTTGGTGTTTGG  95 38
CXD81_RS16600 3433180 .. 3433199 -  -6.3  -3.94877   ATCCTGGAACAAGAA            GGCTCGC GACGCG GCGGGCC             TTGAAGTGTTTGGAG  64 35
CXD81_RS16595 3432695 .. 3432714 -  -7.1  -3.14468   CGCCATTATAGGCAA            GCGCGCGC GCCGG GC-CGCGC            TACGGCCGGATCACG  52 25
CXD81_RS16590 NONE
CXD81_RS16580 NONE
CXD81_RS16575 3429993 .. 3430005 -  -4.7  -3.54424   TTCGACCGGGGGAAA                CGGCG TGT CGGCG                GCCAGCCAGGGCAGT  52 50
CXD81_RS16565 3428458 .. 3428495 -  -3.2  -3.00923   GTGGAAGAGGATAGA   CATGGGGCGGAATTGT AGATCG ACTTTGCCGCCCCGCG    CGTGCTCAGGGCGGC  42 31
CXD81_RS16560 3427375 .. 3427387 -  -6.2  -4.74103   TGCCCAAGGCAAAAA                GCCC TCTTG GGGC                CCATGCCCGCTCGGG  82 49
CXD81_RS16550 3425244 .. 3425279 -  -8.8  -3.54424   TCGCATTCCGCGAAA    CGG-CGGGCGCGCAGGC CTC GCCCGATCGGCCGGCCG    GGCCGCGCGATGCGC  62 67
CXD81_RS16520 3416389 .. 3416406 - -10.5  -3.21218   ACGCCCGAGCAGGAA             GGGCGCA GCAA CGCGCCC              AAGCGCCAACTGGCA  60 82
CXD81_RS16500 NONE
CXD81_RS16495 NONE
CXD81_RS16490 3411907 .. 3411919 -  -2.6  -3.07816   TCTGGAGGCAGCCAA                CGAG ATCCA CCCG                CCCTTAGTGGAGACG  41 29
CXD81_RS16485 3410500 .. 3410518 -  -6.7  -3.77832   GCGCAAAGCGAAGAA            CGCACCGG CCAC CCGGTG-G             ATGCGCGCCGCAACA  61 313
        galU 3407985 .. 3408003 -  -4.4  -2.71924   CATGGCGCCGCAAAT             GGTGGCCG GCG CGGTCATC             GCCTTTACCGAGCGC  40 299
CXD81_RS16455 3403794 .. 3403820 -  -9.5  -2.62184   CCCGGCGGTACAGCA        GCTGCGCTTCGGC GCC GCCG-AGC-CAGC        CGGCGCGCGCGCCTG  55 143
CXD81_RS16440 3399909 .. 3399923 -  -2.8  -4.09685   CGCCAGCCCCTAAAA               TGCC CCTGTCC GGCA               CGCGCCGCTTTTCCG  59 521
CXD81_RS16430 NONE
        dusB NONE
CXD81_RS16420 NONE
        purH NONE
        ruvC NONE
        ruvA 3394342 .. 3394390 - -10.8  -3.30124   GCTCACGCGCGACAA CGTGGCCAGCGGCGCCGCGCCCTC GGG GTTGGC-C-GCGCCGCCCGCCGCG CTGGAGGCGGTCGCG  66 83
        ruvB 3390999 .. 3391033 - -14.9  -4.84359   CGAGGCCGAGAAAAA    GCCGCGCAGCTCGCGC GCGG GCGCCCGC-GCGCGGC     CCGACCCCATCGACC 100 272
CXD81_RS16375 NONE
CXD81_RS16370 3386875 .. 3386910 -  -9.1  -3.03124   GGCCATGCGTGAACA   TGC--CCAGGCGCGC GCGCAATG GCGCGCCTGGATGCA    GGACTACGATGCGTT  55 336
CXD81_RS16355 NONE
CXD81_RS16350 NONE
CXD81_RS16345 NONE
CXD81_RS16340 3381809 .. 3381852 -   -21  -3.53091   AGCCTGGCGGGCAAA GTCAGCGGGTGCCTGTCCCC CTGC GGGGACAGGCACCCGGGGAT CAGTCTATCTTGTAG 100 25
CXD81_RS16335 NONE
CXD81_RS16330 3379244 .. 3379257 -  -2.4  -4.10144   TGAAGACAACAAGAA               CGAT CCGCGC ATCG                CGCGCTTTATCAAGG  58 151
CXD81_RS16320 3377263 .. 3377273 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS16315 3375746 .. 3375772 -  -5.9  -4.14243   CACTCCAGCGCAAAA        CCAACA-GTGCC CTGG GGCACGTGTTGC         AGAGACCCCACTCTA  66 512
CXD81_RS16285 3371967 .. 3371980 -  -5.9  -6.06723   GGGGCGAAAAAAAAA               CCGCC CGAA AGCGG                TTGATCAATCCTGTG 100 468
CXD81_RS16280 NONE
CXD81_RS16275 NONE
CXD81_RS16270 3368554 .. 3368588 -  -2.6  -2.74012   TCAGCAGCGCAATGA     TCCGGCGCACCACCCC GTT GCTGTAGCGCACCAGG     TCGATGGCGTGCCGA  38 50
CXD81_RS16265 NONE
CXD81_RS16260 3367205 .. 3367229 - -15.7  -4.67038   GCCCCAAAAGCAAAA          GCCCCACTGGC TCG GCCAGCAGGGC          TTAGAAAGAAGAAGG 100 77
CXD81_RS16255 3366377 .. 3366395 -  -3.9  -3.28924   GATGGCTTGGTAGAA            CGA-TTCC TGGA GGAAGTCG             CCTTCGAAGCCGGCC  47 186
CXD81_RS16240 NONE
CXD81_RS16235 3364216 .. 3364233 - -10.5  -3.65351   GCAGGCTGACGGAAA             CCCCCGC GTGA GCAGGGG              CAACCGTCAATCGGC  70 43
CXD81_RS16230 NONE
CXD81_RS16225 NONE
CXD81_RS16220 NONE
CXD81_RS16215 NONE
CXD81_RS16210 NONE
CXD81_RS16205 3361730 .. 3361743 -  -9.5  -5.46657   GAGGGCAATAAAAAA               CCGCC ATGT GGCGG                GTTCCAGTTGCGCCC 100 69
CXD81_RS16200 NONE
CXD81_RS16195 NONE
CXD81_RS16190 NONE
CXD81_RS16185 NONE
CXD81_RS16180 3357332 .. 3357352 -  -3.1  -5.32944   CGGATAATGAAAAAA            TGCCGCGAC GAG ATCCCGGCG            TTCGGGATTACTCAT  89 33
CXD81_RS16175 NONE
CXD81_RS16170 NONE
CXD81_RS16165 NONE
CXD81_RS16160 NONE
CXD81_RS16155 3351808 .. 3351820 -  -6.2  -5.80817   CTCAACACAAAAAAA                GCCC CCTAT GGGC                CCGTTCATTCATTGG 100 30
CXD81_RS16150 NONE
CXD81_RS16145 NONE
CXD81_RS16140 NONE
CXD81_RS16135 NONE
CXD81_RS16130 3349017 .. 3349037 -  -9.7  -3.54741   GAGCAGCTGGTGAAA            GCCAGCC GCTTTCA GGCTGGC            GACCGCGTGCTGTTC  64 405
CXD81_RS16115 3348376 .. 3348386 -  -8.2  -2.78216   CATCGTCACGAACGA                 CGCC CTG GGCG                 GCATGGTCGACGTGC  52 235
CXD81_RS16090 3344486 .. 3344504 -    -3  -2.65264   TCACGATCGATAGGA             GCCCTG TGGCTGC CGGGGC             GGGCTGGCGCCCGCC  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB 3340552 .. 3340571 -  -2.8  -2.54325   CCTTTGCAAAGAGAG            TCACACGT GTTA ACGGGTAA             AAGGGCCCCACGTTG  39 15
         pal 3339972 .. 3340001 - -21.5  -4.54727   GGTCTGAAACGAAAA       CGTCGGGACGGCC GGAT GACCGTCCCGACG        CGTGGTGGGGCTGCT 100 56
        ybgF NONE
CXD81_RS16050 NONE
CXD81_RS16045 3337294 .. 3337321 - -10.5  -4.15453   GAAGTCAGCGGAAAA        CGCGCCGCGGCC GGGCT GGCGGCGG-GCG        AGGTGCTCATCCTAT  78 120
CXD81_RS16040 NONE
CXD81_RS16035 3335913 .. 3335924 -  -2.2  -3.21099   GGGCGTGACCAGGAA                GC-CG TGG CGCGC                GTAGTGCAGGGCCGG  42 465
CXD81_RS16025 NONE
CXD81_RS16020 3333755 .. 3333809 -  -2.5  -2.70932   CCTGTTCTGGAAGCA TCTGGGCCACG-CCGGCGCCAACACC TTGC GGGCCTGGGGCCGGGCCTGGACCGGC GGGCTGCTGGCGCGC  38 500
CXD81_RS16010 3330631 .. 3330645 -  -4.2  -3.64703   TCGCGCTGACCGAAA               GCGG GCACACG CCGC               TGATCATGTCGCGCA  51 297
CXD81_RS16000 3328135 .. 3328147 -  -9.1  -2.52464   GCGTGGCGCAATTCA                TCGGC CTG GCCGA                CGCCTTGCTGGCGGC  51 100
CXD81_RS15980 NONE
CXD81_RS15975 3321450 .. 3321466 -  -2.2  -3.53012   TGTCTTCGGGCCAAA              GTGGTA GAGGA TACCGC              GTTGCAGCCTCCTTG  48 94
CXD81_RS15970 3320308 .. 3320327 - -16.4  -3.15147   GTCAAGCAATAGACA            GGGCGGCG CGTC CGCCGCCC             ATGCCGGCTGGCGGA  81 388
CXD81_RS15945 3316819 .. 3316833 -  -3.4  -4.07687   ACCGGGCGGCGAAAA               CGCCGG TTT CCGAGG               CCGACGCCAAGCGCG  60 247
CXD81_RS15910 3307577 .. 3307591 -  -2.1  -3.84406   CGCCTACCAGAAGAA               GATCG GCCCG CAATC               GTCGCTGCGCGAGCG  56 430
        nspC 3304647 .. 3304666 -  -4.2  -3.18366   GCTTCAATCAACAGA            GCCAGTTCC TCA GGA-CAGGC            TGTCTACGTAATCCT  45 15
CXD81_RS15890 3303253 .. 3303263 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 119
CXD81_RS15885 3302118 .. 3302144 - -10.1  -3.06133   GAATGTTCGATTGAA         GCGGTAGCCGT ACGAA ACGGCCACAGC         GTTGCGCTGCCGGCA  60 130
CXD81_RS15880 3301394 .. 3301437 -  -2.8  -3.91897   CGGGTCACGTACAAA TGGTAGGGAACGCGGCCGGC GTCA GCGCGCCGCTTCCGCGACCG CCTCGATGGTGATGC  58 3
CXD81_RS15865 3296723 .. 3296739 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD81_RS15845 NONE
CXD81_RS15840 3292030 .. 3292058 -  -7.9  -3.07113   TACTACCTGATGGAA        CCGGGCAGTGGCG AAG CGCCGCCGCGCGC        GCTGCCGCCGTGGCC  52 295
CXD81_RS15830 3290402 .. 3290436 -  -8.5  -3.06183   TGCATCGGCACGGAA     TTGCGCGCGGTCC TGCCGGTAT GGTCGGCGCGCAA     GCAATGGCTGGCCGA  55 501
CXD81_RS15805 3285982 .. 3286002 -  -8.2  -3.12999   GTATCCGACAGGTAA            GGGAGCCG GCCGG CGGCTCGC            ACACTCATACCCGGC  56 101
CXD81_RS15800 NONE
CXD81_RS15795 3284767 .. 3284792 - -13.3  -5.15969   CGCGAACGCAAAAAA         GCCGACACCAC GTTT GCGGTATCGGC          TTTCGCTATGCGCCC 100 108
CXD81_RS15785 NONE
CXD81_RS15780 NONE
CXD81_RS15775 3278136 .. 3278170 - -13.5  -2.99947   GAATCTTCACAGATA    GCC-GGCCTCGCCGGC CGGC GCCGCCGATGCCAGGC     GTGCGGCGCCCAATG  70 152
CXD81_RS15765 NONE
CXD81_RS15760 3274593 .. 3274608 -  -7.5  -3.14211   ACTGCGCGCGAGCAA              CGGCG GATACG CGCCG               CGAGGCCGGGGCACC  54 62
CXD81_RS15750 3273623 .. 3273644 -  -2.1  -3.07291   AAGTAGTCGATTGAA           CGGATTCGC ACCG ACGCAACCG            GTGTGTAGCGCTCAG  41 161
CXD81_RS15745 3268430 .. 3268458 -   -11  -3.31779   AAGAACGCAAAGAGA       CGGCGCCGCCGCGC GAG GCA-GGCGG-GCCG       TGATTCACGGCGCTT  66 40
CXD81_RS15740 NONE
CXD81_RS15735 NONE
CXD81_RS15730 3263486 .. 3263510 -  -2.7  -3.59979   GCCGGTTATGCGAAA          TCTGCATAACG CGG CGATTTGCAGG          GTTACTCCTTAGGCG  49 27
CXD81_RS15725 NONE
CXD81_RS15720 3261414 .. 3261430 -  -6.5  -3.54424   CGCCATCCGGGGAAA              GGGCG AACAGCA CGCCC              CAGTTCCATTGATAT  56 129
CXD81_RS15710 NONE
CXD81_RS15705 3259221 .. 3259237 -  -7.9    -3.273   GTAGAAAAGGGAAGA              CATGCGG CTA CCGCCTG              AGTATTGGATAACGG  56 41
CXD81_RS15700 3257878 .. 3257891 -  -2.3  -3.44848   GGGCTTCACCAAACA               GGACG TCCA CGTCT                TCTACGTCAACAGCG  47 497
CXD81_RS15675 3253241 .. 3253260 -   -15  -3.14564   CCATGGCGGGAGCAA            CAGGCGGC CGGC GCCGCCTG             GGGCTTGCTCGCCGG  76 151
CXD81_RS15670 3251872 .. 3251890 - -10.2  -3.04461   GACCCAGGCCGAACA             CGCCGCGA TCC TCGCCGCG             CTGCGCGCCGGCGAC  59 182
        pepN 3236169 .. 3236181 -  -3.3  -2.74192   TACGTTTCAAGAGTA                GCTCC TAA GCAGC                CAGATCCAAGGCTTT  40 17
CXD81_RS15600 3234944 .. 3234978 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CXD81_RS15575 NONE
        serB 3228422 .. 3228444 -  -6.1  -3.16039   AAGCAGCCGGAGTAA           GGCGCGCGG GCCGG CCGGGCGGC           GGGAGGCCGTCGCGA  51 131
CXD81_RS15560 NONE
CXD81_RS15555 NONE
CXD81_RS15550 3223263 .. 3223279 -    -3  -4.11484   GGCAAGTGCTGAAAA             CAG-ACC GGCT GGTGCTG              GAGCCGCAATCGATG  61 509
CXD81_RS15450 NONE
CXD81_RS15445 NONE
CXD81_RS15440 NONE
CXD81_RS15435 NONE
CXD81_RS15430 3199048 .. 3199064 -  -2.1  -3.05384   GTGGCCGTCACCGAA              TGGGCGC TGC GCGTCAA              CGCGCGAGCATGAGC  41 22
CXD81_RS15395 3191758 .. 3191791 -  -6.9  -3.09516   CTTTTCATGACGCAA     CCTAATTATCAAAGA ATAT TCTTGGATAATTAGT      CAAAGCGAGATTACC  52 108
CXD81_RS15390 NONE
        mexI NONE
CXD81_RS15380 NONE
CXD81_RS15375 3185118 .. 3185128 -  -3.2  -3.28712   CGCGGGCCTGGACAA                 CCAG TAC CTGA                 AGGCCGGCGATACGC  47 239
CXD81_RS15360 NONE
CXD81_RS15355 NONE
CXD81_RS15350 NONE
CXD81_RS15345 3177136 .. 3177187 - -12.9  -2.53876   GCCTACCTGAAGGGA GGCACCGCGGCGC-TGGGCGCGGA CCGGC TGCGCGGCGACGCGCCGCAGTTCC TGACCGAGGCGATCG  62 232
        lrhA NONE
CXD81_RS15315 3169640 .. 3169658 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 303
CXD81_RS15280 3160629 .. 3160666 -   -12  -3.05816   GGAGCGCTCATGGAA   GCAGCGCCTCGAACAGC TGCAC GC-GTTCGCGTCGCTGC   GGCAGGCTACCCAGT  66 470
CXD81_RS15250 3155144 .. 3155154 -  -4.6  -4.07568   CGGGCCTGGGGAAAA                 CAGC GGT GCCG                 TTTGATGGTGCACCC  62 31
CXD81_RS15245 3154041 .. 3154080 -  -2.8  -3.90291   AGCTGGTCAACGAAA  GCGATATCGAGCATG-CCA TCG TGGTCCTGCTGGAAATCGA  GAAGACCGTGGTCGA  56 434
CXD81_RS15235 3151947 .. 3151957 -  -4.6  -3.36327   CCAGCGCATCTACAA                 CGCG GCG CGCA                 ATGTCGAGGCGGCCG  49 255
CXD81_RS15210 3147501 .. 3147515 -  -2.1  -2.50816   TGGTCATCTACGAAT              GGATCC TGCA GGA-CC               TCGGCCGCTGGGGCT  37 520
CXD81_RS15180 3141141 .. 3141152 -  -7.2  -2.52623   GCTGGCCGAGAACAT                CGCC TACG GGCG                 GCCCGGGGCCACGCA  48 497
CXD81_RS15170 3138720 .. 3138736 - -11.5  -2.77013   GATGTCGGTAACAAG              GCGCAGC ATC GCCGCGC              TCAGCCCAGGCGTTC  62 26
CXD81_RS15165 NONE
CXD81_RS15160 3138210 .. 3138229 -  -4.2  -4.00042   GTGCGCAGCAAATAA            GGCCGCGCG GTT CA-ACGGCC            GGTATCGGGGTAGTC  59 17
CXD81_RS15150 3136177 .. 3136191 -  -7.1  -2.70932   GCCGGCGCTGAACTA               CCGCT TCGAC AGCGG               CAGCACGCTGACCTT  49 365
CXD81_RS15135 3133268 .. 3133296 - -16.9  -5.53288   CCGAAGCGAAAAAAA        TCCCATGCAAATC AGT GATCTGCATGGGA        TTTCCGGTCTGGCCG 100 59
CXD81_RS15130 3130100 .. 3130158 - -29.8  -3.25072   GGGAGGAGAACGGAA TG-GGCGCGGCCATCCGGCCGCCCGCGGC TTGC GCCGCGG-CGGCCGGATGGCCG-GCTTCA GGACAGGGGATGAAA 100 49
CXD81_RS15125 NONE
        accB NONE
CXD81_RS15115 3126595 .. 3126615 -  -3.9  -2.93853   CCGTGGCAACGAAAC            CGGGACC GGTTCAG GGTCGCG            TGAACGAAATGTGTT  43 15
CXD81_RS15110 NONE
CXD81_RS15105 NONE
CXD81_RS15100 NONE
CXD81_RS15095 NONE
        accC NONE
CXD81_RS15080 NONE
CXD81_RS15075 3119522 .. 3119540 -  -6.7  -4.11216   CCGTTACTTGCAAAA            CGCG-TGC GGCT GCAACGCG             CGACGTCGGCGGGTG  67 137
CXD81_RS15070 3119185 .. 3119200 -  -3.2  -3.10775   ACGCGCATGCAAAAG              GCGC TCCAGGTG GCGC               AACCGCGACGATAAC  44 105
CXD81_RS15065 3117962 .. 3117974 -  -6.3  -2.88544   GTCCACTCCTACACA                TTTGG TAG CCAAA                TTGTAAAGGATTTCG  48 93
CXD81_RS15060 3117697 .. 3117718 - -17.3  -3.84451   CGGGCGAAATGCAAA           CGGGCAGCC TGCC GGCTGCCCG            TCGCGCGCCCCTCAA  95 37
CXD81_RS15055 3117227 .. 3117237 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CXD81_RS15050 3116129 .. 3116165 - -15.7  -3.14132   CGGCCCGTGCAGGAA    CGGCCGCCTGACGGCCT TGC AGGTCGACGAGCGGCCG    GATGCCGGTGGCATG  77 82
CXD81_RS15035 NONE
CXD81_RS15030 3111979 .. 3111991 -  -9.1  -3.17075   CGGCGGCTAAGCGAA                TCCGG CCA CCGGA                TGCGGCGCATAGGCC  59 4
CXD81_RS15015 3109422 .. 3109455 -  -5.8  -3.62046   CGACTTCCTGAACAA     CATGCGCCCCAGCG ACGGCG CGCCCGCGCGCGTG      CAGCAGCCCGGGCAG  57 255
CXD81_RS14990 3102768 .. 3102778 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS14985 3101446 .. 3101497 -  -9.2  -3.21099   GCCGCTGATCAGGAA CGGCGACCTGCGCGCGCTGGCCG TCACGAG CCGCAAGCGCTCGCCGG-CGCTG CCCGACGTTCCGGCC  56 292
CXD81_RS14975 3099513 .. 3099544 - -11.6  -2.81133   GACGCACCCAGCAGA      GAGCCCCGAC-TGGA CAA TCCGTATCGGGGCTC      TCGTTTGCGTGGGTA  63 238
CXD81_RS14965 NONE
CXD81_RS14960 3097717 .. 3097742 - -18.3  -4.55798   GAGGGGAAATGAAAA         GCCCCGCGCAA CACC TCGCGCGGGGC          AAAATAGTTTGTTAA 100 291
        gyrA NONE
        serC NONE
        pheA 3088184 .. 3088235 -  -4.5  -4.84761   ATACCTGCAGAAAAA CAATATGGCAG-CGCCG-GACGGA CACACGC TCCGTCACGGCGGCCGCC-TGGTG TGCGTCAACCACGCC  82 47
CXD81_RS14905 NONE
        aroA 3085927 .. 3085940 -  -3.1   -3.6692   GCGGATGCGAAAATA               GCCATG GGG CA-GGC               GCCGTTCAGTCCCGC  53 31
CXD81_RS14895 3085248 .. 3085258 -  -6.8  -3.91984   ATACTGCCGAAACAA                 CACG CGC CGTG                 GCTAGGCGCACCAGA  66 27
CXD81_RS14890 NONE
CXD81_RS14885 3082925 .. 3082954 - -16.6  -5.00616   GCCGGCCCGAAAAAA       CAAAGCCCCTTG AACAAG CAAGGGGCTTTG        CCGGTAGAACACCAA 100 67
CXD81_RS14880 3082442 .. 3082456 -  -3.4  -3.56092   CCACCAGGGTTCAAA               GTCCAC AGC GCGGGC               TCTCGGTAGGAAGTA  49 59
        lapB NONE
       rfaE1 NONE
        rfaD 3079272 .. 3079296 -  -4.2  -3.40597   CGGTGCACGCAAACA         TCCACCCGGGC AATT ACCCGGG-GCA          AATCCGCTACTTCAG  49 32
CXD81_RS14860 3078639 .. 3078649 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS14855 3077569 .. 3077591 - -14.1  -3.78934   TGCCGCCGATAATAA           CCGCCCCGG ATCGG CCGAGGCGG           TTTAGCCGCGCTGGC  83 69
        cysM 3076258 .. 3076307 -   -17  -3.01712   CTTCCTGGTCGAACA TGGCTGGCAGCGCGGCCTGC-CG GTGTT CGCGCCGGTCGCGCTGCCGGCCG ATCCGGCGCCGCTGG  82 361
CXD81_RS14840 3074460 .. 3074475 -  -7.5  -3.08006   AAATAACAATAATTA              CCCGG CGAAAC CCGGG               ACCGCATTGCACAAT  54 53
CXD81_RS14835 NONE
CXD81_RS14830 3072707 .. 3072726 - -16.4  -5.75945   ATGGCCGAAAAAAAA            CCGCGGGC GACA GCCCGCGG             CTTTCTCTCTGCGTG 100 52
CXD81_RS14825 NONE
CXD81_RS14820 3069923 .. 3069938 - -11.8  -5.86332   CCAAGGCAAAAAAAA              CGCCCC TTGC GGGGCG               TTCTCGCCGAAGCGG 100 46
CXD81_RS14815 3068649 .. 3068665 - -11.5   -3.5944   ATCGAGATGCCGAAA              CCCGGCA ATA CGCCGGG              GCGCTGGCGCCGCGC  72 95
        cysA 3065562 .. 3065595 -  -5.1  -2.71712   GTCGGGCCGGTAAAC     CGTGATGG-CGCGCCC GTA GCGCGTGGCCACCGCG     TCCAGCACGCCGAGG  45 264
        cysD 3063812 .. 3063823 -  -3.6  -3.90048   GGGTGTCGAAAAATA                GCGG TAGG CCAC                 ATCGATGGTGATGCC  59 330
CXD81_RS14780 3061291 .. 3061311 -  -4.5   -3.6215   CGAATGCATGTCAAA            CCACTGCCG CGA CGGGCGCGG            CCCCCTACCACTGGC  52 80
CXD81_RS14775 3060756 .. 3060771 -  -4.6  -4.62069   CTGCTACGGGAAAAA              GTAGGC ATAG GCCGAC               TGGCTGGCTGCCTGG  75 86
CXD81_RS14765 3059159 .. 3059210 - -22.6  -2.87132   GCTTTCTTCCAGATA TCTTTTCGCAATAAAAGGACACCC TTGC GGGTGCCCTTTTATTGCGGAAAGC CGTGCCAGACACAAA 100 81
CXD81_RS14760 3058278 .. 3058295 - -14.1  -5.14563   GCCGGGATGAAAAAA             GGCGCGC CACG GCGCGCC              GTACTGATCGGGAAT 100 60
CXD81_RS14750 3055893 .. 3055911 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 244
CXD81_RS14730 3052028 .. 3052060 -  -3.4  -3.80733   GGCAGGCCAGAATAA      CCCGGCGTTT TTAAATTTGCGTT AATCGCCGGG      CCGGCGGCGGCCGCT  56 69
CXD81_RS14715 NONE
CXD81_RS14710 3045718 .. 3045748 - -25.6  -3.55444   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 46
        aceE NONE
        aceF NONE
        lpdA 3032568 .. 3032591 - -18.2  -2.52464   CGCCGCGCCAACGCA          CAAGGGCCCC GCGA GGGGCCCTTG           TGCTGCCATGCCGCG  85 45
         tkt NONE
         gap 3026055 .. 3026097 - -21.4  -4.07568   GCCTGCCTGCGAAAA GGGCCAGATCCGTTTCCCCG TGA CGGGAAAACCAACCTGGCCC TTGCGCCCTGTTCAG 100 51
         pgk 3024595 .. 3024610 -    -6  -3.01712   CCGGGCCGCTCAAGA              CCCGCG CCGC CTCGGG               CATCACCGGCTTCGA  48 227
CXD81_RS14590 NONE
CXD81_RS14585 3014656 .. 3014672 -  -2.1  -3.01712   CCGGGCGCGTCAATA              GGCTTGC TGC GCATGGC              ATGGGTAGCAAGAGA  41 68
CXD81_RS14580 3013260 .. 3013294 -  -6.3  -3.64487   CGACACGGCCAAGAA    GGTCGCGCGGCTGGAA GGCC TGCCGG-CGCGCGAGC     GCGCCGACTTGCAGC  59 456
CXD81_RS14570 3011369 .. 3011394 -  -3.9   -4.7416   TGAAAATCTGAAAAA         CGGCGCGC-CCA CTA TAGCGCACGCCC         TATTGCCGGGCGGCG  77 25
CXD81_RS14565 NONE
CXD81_RS14560 3009899 .. 3009909 -  -8.2  -3.02511   CCGACCGGCTGAACA                 GCGC CCG GCGC                 GCGTTCGGCCTCGGC  55 264
CXD81_RS14545 3007884 .. 3007908 -  -7.8  -3.93369   TGAACCTCAAGGAAA          TCGGCGCCGT GCTCA ACGTCACCGA          GGCGCGCGTGTGCCA  67 436
        flhD NONE
        flhC 3005850 .. 3005890 -  -4.6   -2.7386   AACCGACGCCAATGA TCCCCCCTGACCCGTCG GGCAAAAA CG-CGGGTTATGGGGGG  TTTTCTGGTGCTTTT  43 64
        motA NONE
        motB NONE
CXD81_RS14515 NONE
        cheA NONE
        cheW 3000944 .. 3000966 - -12.7  -3.90856   AAGCGTTGAACGAAA          CGACGGGCGG CGCA CCGCCCG-CG           GACTGACCGCCGTCA  82 38
CXD81_RS14500 2998848 .. 2998883 -  -7.5  -2.82516   CGGCGCAGCACCACA    CCGATACCGGCCCGCC GCGCT GGCGCGC-GAAATCGG    CCAGGATGGGAAAGT  52 341
CXD81_RS14490 2997250 .. 2997289 -  -2.1  -4.43909   ACTCCAAGAAAATAA TGTCCGGACGC-CCGCTCC GTTG GGACCGGGGCGTC-AAACG  CGATGCCCGCGGTCG  67 19
        cheY NONE
        cheZ 2996001 .. 2996019 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 206
CXD81_RS14455 2993017 .. 2993040 -  -6.6  -3.68351   TGCGCACCATGGAAA          CGGCGCGCCCC ATG GTGGC-CGCCA          CCAACACCGGCATCA  61 231
        dacB NONE
CXD81_RS14385 2977384 .. 2977398 - -11.4  -6.34424   GCGGCAAAAAAAAAA               CCGCCT GCA AGGCGG               TTTTCCTGTGGGCGG 100 59
CXD81_RS14380 2976004 .. 2976028 -  -3.4  -3.34398   GTCGTGCGCGAAACA         CGCG-CCGGTC CTGT GCCCGGTCCCG          CCCCGCAGGCCAGGG  46 77
CXD81_RS14375 2972969 .. 2972983 -  -2.7   -4.2679   CAAGCTCCAGGAAAA               CCTCC TCCGC GGGGG               ATAGACCCTCCTCGC  63 42
CXD81_RS14365 2970492 .. 2970535 -  -8.6  -2.66316   GCGTTCATCATACCA GCCGCGCCCCGCGCCACGCA CCCC CGCGTGCTACGGGGTGCTAC TTCAATTGCGTAATC  52 22
CXD81_RS14360 2970085 .. 2970137 -  -7.4  -3.66999   ACCGATCTACGCAAA CCCATTGTGCATGCCGGGGCGGAC GCGCG GCCCGCCCCGCCGTGATCAGCGGC GGCTGATCAGCAGGC  63 18
CXD81_RS14355 NONE
CXD81_RS14350 2969173 .. 2969194 -    -5   -3.7282   GGACGCCACCAACAA           GTGGCCGG GCGAAA CCAGCCGC            GAATGGGGCACGCCC  58 146
CXD81_RS14340 2966397 .. 2966417 -  -3.1   -4.4017   CCAAGGTCGAGAAAA            TGGCCGCCA GCC TGGCGATCT            GCGCGCCCACGCTGG  68 422
CXD81_RS14325 2964630 .. 2964646 -  -4.4  -3.27704   AGCTGCGAAAGTGAA             CGATGCG GCAG CGCA-CG              CCGGAAAGATGCTAC  49 89
CXD81_RS14320 2962033 .. 2962047 -  -3.4  -2.62184   CGGCCCGGTACACCA               TGCCGG TCT CCAGCG               AGGCCCACAGCCGCC  39 283
CXD81_RS14310 2960404 .. 2960438 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 221
         ppx 2951348 .. 2951382 - -21.4  -2.52464   GCTCCCCGGAAGTCA     GCGGGAGCCAGTCCCC TTC GGGGACAGGCTCCCGG     AGATCGGGTTTCAGG 100 36
CXD81_RS14240 2944520 .. 2944545 - -10.3  -3.53012   GCGGCCCGCCTGAAA         CCGGCGGGCCC GTCC AGGCCGGCCAG          ATCAAGTACTATCGC  67 34
CXD81_RS14235 2943044 .. 2943058 -  -5.6  -3.02144   CCAGGCCGCGCAACA               TGGGCC CCA GGCTCA               TGCCCTGCGCGTCGG  47 419
        dusA 2939466 .. 2939500 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS14185 NONE
CXD81_RS14180 2933913 .. 2933923 -  -3.2   -3.7614   AATCAGGACGAACAA                 CTGA CTT CCAG                 CCCAGCTGCCCAGTC  56 2
CXD81_RS14175 2932851 .. 2932882 -  -9.4  -3.03243   ACGGATCTTCGAAGA      GCATTAC-CGGCGGG CCG CCCACCGCGAAACGC      CCGGCAGCGGACTGG  55 174
CXD81_RS14165 NONE
CXD81_RS14160 2928034 .. 2928056 -  -5.5  -3.72324   CACCTCCAGGAAGAA          CAGGGCGTCC ATCA GGCCGCC-TG           CGCCGCCAGCCGGCG  57 14
CXD81_RS14155 2926934 .. 2926953 -  -6.4  -3.73775   CCCAGGCCCATGAAA            GCC-GCCTG CCC CAGGCTGAC            CAGCCCGGTATAGCC  59 239
CXD81_RS14145 NONE
CXD81_RS14140 2924332 .. 2924346 -  -3.5  -2.78384   GCGCGCGTCATGACA              GCCAGC GCTT GC-GGC               GCTTGTAGTGCTTGA  41 3
CXD81_RS14135 2922416 .. 2922437 -  -2.9  -3.12351   GCGCTGGATACGCAA           CGCCGGACCG CGC CGGTACG-CA           CCGCCACCTGCCTGC  44 50
CXD81_RS14130 2921235 .. 2921272 -  -7.6  -2.73364   GGTCGAGGCCAAGGA   CGCCGGCGACGAAGAA GCCATG TACTTCGACGCCGACT    ACATCCGCGCGCTCG  49 504
CXD81_RS14095 NONE
        lolD NONE
CXD81_RS14085 2912364 .. 2912395 -  -4.2  -3.78775   GCGGGCAGGAGGAAA      CAGGGGCCCGG-CGC CGG ACGGCCGGGCGTCAG      GGCGTCGCCGCCCTG  57 22
CXD81_RS14080 2908772 .. 2908796 - -12.8  -6.34424   GCGGCAAAAAAAAAA          CCGCCAGTCG ATACA CGACAGGCGG          CCAACAACGGGCGGA 100 109
CXD81_RS14075 2908255 .. 2908273 -  -3.8  -3.60762   GAGTGGCCAAAAAAG             GCGAAGTC GCT GACTTGAC             GAGGATTTCGCCTAC  51 187
CXD81_RS14070 2904179 .. 2904207 -  -9.4  -2.87132   CCTGCTCGCCAGACA        GTGGGAGGCGCC CCATC GGCGCCCCCCGT        CTTACGGCGCTTAGT  56 36
CXD81_RS14060 NONE
CXD81_RS14055 2899512 .. 2899526 -  -2.7  -3.02263   AGAGGTCCTGCAAGA               CCTCG GGTAG CGCGG               CTTCGCCGCGCTCCG  42 53
CXD81_RS14050 2898598 .. 2898621 -    -8  -3.09015   TGCATAGGGATTCAA          GGGCAGCCGG GGCG CCAACGGCCC           GGCGCGAAAGGCGCG  54 43
        greB 2897767 .. 2897801 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 241
CXD81_RS14015 2890368 .. 2890386 -  -5.2  -4.42081   AACATAAAGGGAAAA             CCCGCAAT TTT ACTGCGGC             CCGCTTCCCTGCCTG  72 16
CXD81_RS14005 NONE
        odhB 2883747 .. 2883803 - -12.9  -3.74693   CCGGATTCGACGAAA CCGGCAGGGCCGCC--GGGC-GGGCCGC GATG GCGGCCCGGCCCTTGGCGGCAGCGACAG AAGAAGGCATTCTTC  79 58
        lpdA NONE
        zapE 2880885 .. 2880901 -  -3.5  -3.14132   GGCCTGCCGGAGGAA              GTCGCCG CCA CGGTGGC              CTTCCTGGCTTCCGA  45 114
CXD81_RS13980 2879029 .. 2879063 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS13945 2873488 .. 2873516 - -19.6  -2.53876   GCTGATCGCAACGCA       GGCGCCGC-CCCG TCAT CGGGTGCGGCGCC        TGCGTCGTTGCCCCG  93 67
CXD81_RS13935 2868825 .. 2868843 - -11.6  -3.91911   CGCAGTCCAAGGAAA             GCCCGGCC CCA GGCCGGGT             TTTCCTTTTGCGCGG  81 44
CXD81_RS13925 NONE
        pgeF NONE
        phaC 2864421 .. 2864440 -  -4.8  -3.61894   AACGCCCGCCAAGAA            TGCCGGCC TTGC GGCCCGCG             CGCGTACTCAAACCG  52 33
        phbB 2863596 .. 2863624 -  -9.6  -3.04263   ATTTTACGTGTAATA       CCGGGCGTCCG CTTCCCCC CGGAC-CCCGG        CCCCCTCCGAATGCG  57 44
        phaR 2862919 .. 2862938 - -16.4  -4.24204   GACTCATACGGAAAA            GGGGCGCC CGTG GGCGCCCC             TTTTCCTTCAGCCAG 100 52
CXD81_RS13900 NONE
CXD81_RS13895 NONE
CXD81_RS13890 NONE
CXD81_RS13885 2859610 .. 2859624 -    -7  -2.79183   GGGACCGCCACCATA               CCGCGC CGC GCGTGG               CCGCGCTACCAGATG  48 31
CXD81_RS13880 2858626 .. 2858636 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS13875 2857510 .. 2857532 - -11.9  -2.50816   GCGGCAGCGACGAAG           GCGCGCCGG GACCG CGGGCGCGC           TATGGGCCGGGCTAC  58 115
CXD81_RS13850 NONE
CXD81_RS13845 2852191 .. 2852209 -    -3  -3.58396   CGTGAAATTAAAAAT             CCCACTCG TGC CCAGTGCG             TATGGCAATGCCTGC  49 56
CXD81_RS13840 2850507 .. 2850523 -  -6.5  -3.39895   CGGTGTAGCAATGAA              CCGGC TTTGTGG GCCGG              CATGTTGGTTCCGCG  55 167
CXD81_RS13835 NONE
CXD81_RS13830 NONE
CXD81_RS13820 2845840 .. 2845852 -  -3.3  -3.35679   GCTGCCCATCGACAA                CCCCA ATC TGGTG                GTCGAGCCGTTCGCC  47 465
CXD81_RS13810 NONE
CXD81_RS13805 NONE
CXD81_RS13800 2842691 .. 2842726 -    -9  -3.14132   GCGCTGGCCGACGAA   CTG-GCTGGCCCGGCG TAGGCG CGCCGG-CCGGCTCAG    CGCTGGCCGTCGTGC  59 22
CXD81_RS13790 2840363 .. 2840380 -  -5.5  -3.34398   CGGCGCGGCCAAATA             GCCGC AACGGTCG GCGGC              TTACAGGCAGCGTCT  51 86
CXD81_RS13775 2837766 .. 2837805 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGCCCAGG  64 4
CXD81_RS13770 2836699 .. 2836739 - -16.2  -2.71011   ATGCCTTGGCAACGA  GCCGGCGCGGCGCTAT GGTATGCGG ATAGCGCCGCGCTAGC  TGTGAACTGTCAATA  77 21
CXD81_RS13725 2828810 .. 2828856 -  -5.1  -2.97188   GGACAGGACGAGACA TGGCGCGCCACGCAGGCTCGA GGCCGGT CCG-GCCCGCGCATC-CGCCA GGGATGCGCGCGAGC  47 111
CXD81_RS13720 2827874 .. 2827920 -  -5.1  -3.29461   GAAGTCTTTGCATAA CCCTAGGATACGCCATGCGCCGC GGC GCTATGCCTG-CGCATCC-AGGG CGGCCGCGCCGATCC  51 6
CXD81_RS13715 2827582 .. 2827623 -  -4.3  -4.08216   CCAGGTCGGCGAAAA CCGGCTGACCATGATGTCGC AAG ACGGCACCCTGCCCAG-CGG CCCGTTGGCCGAGCA  60 73
CXD81_RS13705 NONE
CXD81_RS13700 2825537 .. 2825577 -  -6.6  -2.78596   TACCTCGTGACGATA CGGTG-CGCCGGGCGGCCG ATGG CGGCCGCCGGATGGCTGCG  CCTATGGTAGCCCGG  47 111
CXD81_RS13695 NONE
CXD81_RS13690 2824914 .. 2824937 -    -3  -4.07568   CGGCCGCGCGGAAAA          GAGCCAGC TTACCATC GCCGGCGC           GGCGCAGAAGGTCAG  59 37
CXD81_RS13685 NONE
CXD81_RS13680 2823663 .. 2823692 -  -7.7  -3.21395   AGCTGCTGGACAAGA       GCTGCGGCGCCGAG GCG CAAGGCGCCAC-GC       GGCTGGCGCGGGGGC  53 277
        clpB 2819029 .. 2819052 - -13.2  -5.48063   AGCGAACAGAAAAAA          CCCCTGG-TCC ATT GGATCCAGGGG          TTGAGAGACGCGGCG 100 69
CXD81_RS13655 2817262 .. 2817291 -  -4.9  -3.05384   TCCGGCGCCAGCCAA       CTGCCGAGGTCCTG CTG CAGGATCCC-GCTG       ATCACGCGATCGCCG  45 123
CXD81_RS13645 2813179 .. 2813212 -   -11  -2.68942   AGCGCCGGACAGAAC     CCCGATACGCCGCGC CTGGT GCGCGG-GCATCGCG     TCGACACCCTCAAGC  59 388
CXD81_RS13635 NONE
CXD81_RS13630 NONE
CXD81_RS13625 2810003 .. 2810035 -  -9.7  -3.05463   ATGTGCGGCAGGCAA      CCCTGCCGGCGGG CTGCCGC CCCGCCGGCCGCA      ACAGCCGCGCCTGAC  57 47
CXD81_RS13615 2807530 .. 2807551 -  -8.6  -5.47218   GCGTAGGGAAAAAAA           GCAGGCGC GCTCAG GCGCCGGC            GCGCAGCACCTGGCC 100 14
CXD81_RS13610 2806166 .. 2806181 -  -7.5  -3.14132   GCGCGCCCTCATCAA              GGCGC GCCGCA GCGCC               GGCCACGGGCGCAAC  53 377
CXD81_RS13580 NONE
CXD81_RS13575 2800181 .. 2800192 -  -7.2  -4.15565   TTGAGTACCGTAAAA                CCGC CCAG GCGG                 GCCCACGAAACATGT  67 77
CXD81_RS13570 NONE
        crcB 2799179 .. 2799221 - -13.2   -3.6502   CACGCCGGACTGAAA CCTGGCGCCCGCCGCCGGGC TCA GCGCAACAGCAGGCGCACGG TCGCCAGCCCCAGCC  79 3
         alr 2794860 .. 2794883 -    -8  -2.56596   TTGCGTAGCAATTCA          TGCCAGCAGG CCGG CCCGCCGGCG           ATCCGCACAATGCTC  50 39
CXD81_RS13540 2793817 .. 2793839 -  -5.5  -4.45399   ACAGCAACAGGAAAA          TCTGGCGGCG TCAG CGC-GCCAGC           GTGACGATCCGGCCT  72 215
CXD81_RS13530 2792033 .. 2792079 - -12.9  -2.73875   CGCCGCCGAACACGA GCAGCCCGAGGCGCGGCTA TCCGAGTTC CAGCAGCGCCGCCGGCTGC AACTGGCCATCGAGC  63 213
        radA 2788392 .. 2788402 -  -4.6  -3.13299   CCAGCAGACTCAAGA                 CAGG CTC CCCG                 GACGTGCCATCAACG  47 35
CXD81_RS13510 2787502 .. 2787522 -  -6.7  -3.58905   AGCCCGCACATACAA            GGCGCGGCA AAA TGCCGCGTG            ACCTATAATTCGTTG  58 119
CXD81_RS13505 2786939 .. 2786960 -  -2.1  -3.53012   CGCTGGTGCTGCAAA           CCG-TGGCGC TGG GCGGCGTCGG           CCTGCTGGGAGGATG  47 295
CXD81_RS13470 NONE
CXD81_RS13465 NONE
        maiA 2778961 .. 2778982 - -17.3  -5.67063   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 45
CXD81_RS13450 2778556 .. 2778577 - -12.3  -5.09762   AGCGCAATACAAAAA           GCCGCTCAC TTGC GTGAACGGC            CCTTTTGTGTCGACG 100 77
CXD81_RS13440 2776552 .. 2776572 -  -6.7  -4.14392   CGGCAACCTGGAAAA            GACACTGGC CGC GCCCGTGAC            CGTGATCGTCGCCCA  69 417
CXD81_RS13430 2775213 .. 2775239 - -12.2  -3.85698   GGCCGCCCGGACAAA         CCGGTTTGGCGT CGC ACGCCAGGCCGG         CTGTAATGTCTTGAT  81 92
        scpB NONE
CXD81_RS13415 2771035 .. 2771054 -  -9.3     -6.13   ACACTCAAAAAAAAA            TGGGCTG CACGCC CAGCCCA             CCGTATTGCCTGGCC 100 453
        rimP NONE
        nusA NONE
CXD81_RS13400 NONE
        rbfA 2765525 .. 2765554 -    -5  -2.60341   AAGGAGAAAAAGCAG       CGACGA-CAGCCC GGTCA GGACTGGTCTTCG       GGCTCGTCGGGAACA  42 10
        truB NONE
        typA 2762856 .. 2762882 - -22.4  -4.65895   GGCTGCATGTAAAAA         GGGTTGTGGCCG CCA CGGCCACAACCC         TTGCGCTGGCACCGC 100 66
        polA 2758146 .. 2758171 - -17.5  -2.69151   GGCTGTCAGACAGTA         TCCGGCCGGCG CGGA CGCCGGCCGGG          GCCGCATCAGTGCGC  80 32
CXD81_RS13360 NONE
CXD81_RS13355 2756355 .. 2756380 - -21.9  -2.52676   GACGCGGGCAACTGA         GGGCCTGCCCG AGCA CGGGCAGGCCC          CGGCCCGCTACAGGT 100 33
CXD81_RS13345 2752991 .. 2753042 -  -7.2   -4.8048   GGGGTAGAGGAAAAA CTCTAACCC-CGGGTGCCTGTCCCC GCA GGGGACTGGCACCCGCAAACTCCAA CCCCGGCGTGCCTGT  84 117
CXD81_RS13315 NONE
CXD81_RS13310 NONE
        parC 2738820 .. 2738835 -  -8.2  -3.22475   TTCACGCTCAGAACA              CCGGCG ACAG CACCGG               CTGCCTGGGACGCAC  58 2
CXD81_RS13300 2737395 .. 2737429 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS13275 2733745 .. 2733773 -  -8.7  -3.29144   CTACGTGCTGGAGAA        CGGCCGGGTGGTG CTG CACGACACGGGCG        CCAACCTGCTGGTCA  59 157
        ugpB 2724570 .. 2724600 - -21.1  -3.18118   CCAGGTGAGAATACA       GGCGGCCGGCCGG TAATG CCGGCCGGCCGCT       ACAGGCACAGGCCAA 100 145
        ugpA NONE
        ugpE NONE
CXD81_RS13210 2721540 .. 2721573 - -17.3  -3.44325   ACGTCGTACAAGTAA     GGCGCATGCGCGCGG CTCG CCGCGCACGGGCGCC      TGTCCCCGCTGCGGC  87 102
CXD81_RS13200 2719521 .. 2719531 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS13195 2718311 .. 2718351 -  -3.1  -3.06261   TCGCAACCGCGAACA CGCG-CGC-CGCCTCGCCG CTGGT CGGCATCGCCTGCGTCGCG GTGGGCATCTTCTGT  42 191
CXD81_RS13180 NONE
CXD81_RS13175 2716640 .. 2716698 -  -2.9  -4.56597   GCCTTGCGCCAAAAA TCCCATTGTGCCGCAC-GGGCCGCGCGGC CGG GCCG-GTAGCCCTGCGCCCGGCAAGGGGA TCAGGCTGCCGCGGG  69 76
CXD81_RS13170 2715726 .. 2715758 -  -9.7  -3.06671   AGATCGACCGCAACA      TGGCCATGCTGGGCG TGA CGCGCTGCACCGCCA      TGGCGCCCGGGCTGC  59 67
CXD81_RS13110 2705989 .. 2706017 - -10.1   -2.9348   TGTAAATTTTACATA        GGGTGTGGCGCGG TCG CCGCGCCCTAGCC        GCCGTGCTGCGCGTC  59 20
CXD81_RS13105 NONE
        arsC 2703898 .. 2703929 - -24.5  -3.90112   CGGCCGTCAACGAAA      GCGGCCTGGCGCG TCTTGC CGCGCCAGGCCGC       AATCACTCGCCCTCA 100 70
CXD81_RS13065 2698657 .. 2698688 -   -10  -2.81547   CCTGCAGATCAACTA      TGCGCTGGACGACC GCCA GGCCGCGCAGCGCC       TGTTGCCGCTGGCCC  56 306
CXD81_RS13035 NONE
CXD81_RS13030 2693078 .. 2693121 -  -8.3  -2.51133   GAGTCATCCACGAAC GCGATCGAGGTGAGCAGCTCCA CGC TGGA-CTGCG--CCTCGACCGC CTGCATCACGTGCAG  51 258
CXD81_RS12985 2673121 .. 2673178 -  -7.7  -3.07113   GATCAGTCCAGCCAA CGCAACCGGGGCCAGGGCGC-GCGCCGCT CGTG AGCCCCGCGGCGCCC-G-CCGCG-CTGCG CTATGTGGACGACAG  53 66
CXD81_RS12960 2668764 .. 2668787 -  -8.8  -3.53012   GCCCGGCGCCGCAAA          GC-GATGGCGC AGG GCGCCAGCTGC          GGCGGCTGTTCGCCG  61 350
CXD81_RS12935 2665690 .. 2665722 - -12.7  -2.73875   CCTCGGCGAACACCA     GGCC-GTCCGGCCC CAGTTC GGGCAGGACCGGCC      GCGCCGCGCCAGGCG  65 244
CXD81_RS12925 2662093 .. 2662125 - -10.5  -3.05963   ACGTGCAGGTCAATA     CCCTGCGCGCCGCC CTGCCC GACGGCGCGC-GCG      TGGGCACGGTCGACA  59 285
CXD81_RS12910 NONE
CXD81_RS12905 2656159 .. 2656174 -  -4.6  -3.41051   CTACTTCGACGAGAA              CCGGCG CTTC CACCAG               GCCATTGCCGATCTC  52 291
CXD81_RS12895 NONE
CXD81_RS12890 NONE
CXD81_RS12885 2651674 .. 2651686 -  -3.3  -2.64243   GGATATGCGACAGCA                GCTTC ATG GACGC                GGCTCCTGCGGGGCT  39 16
CXD81_RS12880 NONE
CXD81_RS12875 2649102 .. 2649126 - -13.5  -3.21416   CAGCGCCATGAGCAA          GGCCGGGCTGG ACG CCAGCCTGACC          GCCGTCGGCCCGCCG  72 427
CXD81_RS12855 NONE
CXD81_RS12850 NONE
CXD81_RS12845 2643119 .. 2643155 -  -9.4  -3.02511   GGTAGCCGGCCAAGA   CGGACGGTATCTGTCCC CGCA GGGACAGCCAGCG-CCG    GCGACGGGCTACTTC  57 34
        flhB 2636821 .. 2636860 -  -3.5  -3.67296   CAGCACCGAGGGAAA  CGCGGCGAAATCCA-GCG GCTTG CGCGTGAACATCGCCACC  AGCAGGATCATCACC  54 199
        flgB NONE
        flgC NONE
        flgD NONE
CXD81_RS12770 NONE
CXD81_RS12765 2626801 .. 2626831 -  -2.2  -4.32034   GCATCATGATGAAAA       CTCCTGGCGCGGCG CTT CGGCGCGCGCGTTG       ATAATCAGCTGGCCG  65 30
        flgG NONE
CXD81_RS12755 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 2619803 .. 2619828 -   -14  -3.05384   CCGCTTTCCATCGAA         CACGCGCTCC TCGAGG GGAGCGCGCG          CCATTTCCCGACTAC  72 57
CXD81_RS12730 2617926 .. 2617937 -  -2.2  -3.68853   GCAAAAACCGCCAAA                CAGA ACTA TCCG                 GCCGCCATTTCGCCC  51 49
CXD81_RS12725 2616119 .. 2616154 - -22.6  -4.56597   CGCTGCCTGTAAAAA    GACGATCCGGCGCGGC GCTG GCCGCGGCGGATCGCC     GCTTTCCCGTCCTGG 100 92
CXD81_RS12720 2614563 .. 2614578 -  -4.6  -3.78419   GGAGGAAAGATACAA              GGCACC CAGC GGCACC               CGACGGCACCCGACG  58 47
CXD81_RS12715 2613321 .. 2613347 -  -2.9  -3.90744   CTGGCGGGCAAATAA        CCCCTTCGGG TGCCTGTC CCCGC-GGGG         ACAGATACCGTCTTG  58 45
        fliE 2599974 .. 2599995 -  -7.2  -2.88544   CTGGATGCCCATATA           CCGCCGCA ACTCTA CACGGCGG            TGGCCGAGCTGCTGG  50 518
CXD81_RS12590 NONE
CXD81_RS12585 2593283 .. 2593299 -  -3.5  -3.31415   GACGACGAAATCGAA              GCCGGTC ACT GTGCGGC              GATGAAACCGTTGTC  47 14
CXD81_RS12580 NONE
CXD81_RS12575 NONE
        rpsB NONE
CXD81_RS12545 2583882 .. 2583916 - -13.5  -3.83144   GTAAGACAAGAAATA    GGCCGGC-AGTTCGGG AAGC CCCGCCCTGGCCGGCC     CCTACGATGACGCGT  83 40
CXD81_RS12540 NONE
CXD81_RS12535 2582490 .. 2582541 - -10.8  -3.10344   CGCGTACGGAACAGA TTCCGATATCGACACCGGAGCCGT CGAT ACGGCCCCGATACCTCAACCGGAA TTATACGGTCATGAT  64 26
        uppS NONE
CXD81_RS12525 NONE
CXD81_RS12520 2579524 .. 2579552 - -10.1  -3.59979   CGGGTGGACGCGAAA        GGCGGCCCGGCGC GTC ACGCCAGGCCGAG        ATTGCCGGCGAATGA  67 11
        rseP NONE
        bamA 2575702 .. 2575735 -  -2.9  -3.72893   TATTGTGCCACTAAA     CTGCGGGACGGCCGG GCAA CCGGCCATTTCCCAT      GTTTTCATGCGTAAC  53 65
CXD81_RS12505 2575072 .. 2575082 -  -2.4  -2.64218   AGGGTCCAGCAGAAC                 CGGC ATG GGCG                 TGCTTATCGGCCCAG  38 29
        lpxD NONE
        fabZ NONE
CXD81_RS12490 NONE
CXD81_RS12485 NONE
CXD81_RS12480 NONE
CXD81_RS12475 NONE
CXD81_RS12465 2566719 .. 2566739 -   -14  -5.40072   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 46
CXD81_RS12455 2565394 .. 2565413 - -10.6  -3.09015   TTCACAGCTAGTGAA            GCCTGCCG TCGC CGGCGGGC             AAGGTCATGGTTACG  64 36
CXD81_RS12445 2563361 .. 2563384 - -17.4  -3.59979   GGCGCGGACGCGAAA          GGACGCGCCG CGGC CGGCGCGCCC           GGGTCGAACCTCACG  89 36
CXD81_RS12440 2562147 .. 2562167 -  -9.7  -3.67622   CAGCGCGAAAAGGAA            CGTGTCCTG AAG CACGACACG            CGCGTCAACCAGCGC  68 30
CXD81_RS12430 NONE
CXD81_RS12425 NONE
CXD81_RS12420 2559718 .. 2559731 -  -2.4  -2.62616   GGACGCTCGACATGA               CGTT AACGTA AACG                TAAGTCGTTGGCGAG  38 129
CXD81_RS12415 NONE
CXD81_RS12410 NONE
        mmsB 2556333 .. 2556349 -  -4.3  -3.08464   GTATCAGGCATGCAA              GCCTCTC GCG GAATGGC              CCTGGCCGCCCGGCC  47 50
CXD81_RS12400 2555877 .. 2555904 -  -6.8  -2.90075   GGCGCGCCAAGTATA        GGCCGCCGCGCC GTTC AACGCGGCGTCA         CCCGCACCGCGGTCA  50 12
CXD81_RS12395 2554929 .. 2554963 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 204
CXD81_RS12370 NONE
CXD81_RS12365 2547390 .. 2547417 - -14.2  -6.15828   GGCACCAAAAAAAAA        CCCATCC-CGGCA TGG CGCCGTGGATGGG        GCGGACGTTCGAGGC 100 47
CXD81_RS12335 2540769 .. 2540779 -  -4.6  -3.07113   CACCAGGTCATCCAA                 GCCC ACT GAGC                 CCCCTATTCGCGAGT  45 156
CXD81_RS12330 2540458 .. 2540468 -  -2.6  -3.57144   CGCGCCACCTGGAAA                 TAAT CGG ATTA                 CATCTGCAAGCGCTG  48 23
CXD81_RS12325 2539377 .. 2539396 -   -10  -4.07568   GGCTTCGCGCGAAAA            CGGGGTTA CGGT CAACCCCG             ATTATGACACTGCCG  78 27
CXD81_RS12320 NONE
CXD81_RS12315 2537378 .. 2537426 -  -8.6  -2.62184   GGCCGCTGGACACCA CGATCGCGCGC-CTGGCCGCGCC CGTC AGCCCGGCCTGAACGCGCGGCCT ATTTGGCGGCCTGGC  52 24
        apbC NONE
CXD81_RS12290 NONE
CXD81_RS12285 NONE
CXD81_RS12280 NONE
CXD81_RS12275 2529663 .. 2529680 -  -8.4  -3.29829   TATAGCTTCCGACAA             CCGCAC GCCATG GTGCGG              TGCCCGCATGCAGCA  58 88
CXD81_RS12270 2529367 .. 2529381 -  -5.6  -3.13403   TCTTGGTCAGCAACA               TGCCGG GCT CCGGTA               TCAAACGAGGGTGGT  49 26
CXD81_RS12265 2525879 .. 2525901 -  -3.2  -3.01712   CGCGGGTGCGGAAGA           TGTCGGCCAC CAC GTCGCCGTCG           CCGGCCAGCAGCGCC  42 522
CXD81_RS12255 NONE
CXD81_RS12250 NONE
CXD81_RS12245 2523905 .. 2523955 - -10.2  -3.61398   TTTCGCGCGCAAGAA GGTCCGGCGCAC-GCGCCCGGCC TGAGGC GGCCGGACGCCGCGCGGCTTGCC GCCCGGGCTACTGGC  67 33
CXD81_RS12230 NONE
CXD81_RS12225 2520279 .. 2520299 - -16.9  -4.07687   ACGCCCCGTGCAAAA            GGCCACGAG TGT CTCGTGGCC            TTTGGATTTCGTGCT 100 121
        leuC NONE
        leuD 2517994 .. 2518030 - -18.6  -3.37556   GGGAAAACAAGGCAA    GGGCCCGCCGCGCGCG ATCAA CGCGGACGGCGGGCCG    GCAGGCAACGCGTCA  93 38
        leuB 2516821 .. 2516837 - -10.1  -4.58685   AAATTGTGCGAAAAA              GCCGCAA AAA TCGCGGC              CCTTGCGCACAGTGG  93 73
         asd 2515501 .. 2515557 - -11.8  -4.07568   CCTTGCCGTCGAAAA CGGCGCGCCT-GC-G-A--CAAGGGCGCC CGCG GGCGCCCTTGTATCCTGCCATGCGCGCCG GCGCCGCGCGTCAGG  82 36
CXD81_RS12200 NONE
        truA 2512881 .. 2512893 -  -4.7  -3.61398   CTGGGTGTGGAAGAA                TGCGC TGA GCGCG                GACCGTTTGCGTAAA  52 130
CXD81_RS12190 2511754 .. 2511770 -  -6.5  -3.53012   CGCGTCGCGTCGAAA              CGGGG TTATTTG CCCCG              CGCCACCGTCGCCAT  56 14
CXD81_RS12185 NONE
CXD81_RS12180 NONE
CXD81_RS12175 NONE
CXD81_RS12170 2508409 .. 2508429 - -15.5   -5.1101   CGATCAGGCAAAAAA            CGCCAAGTC AGC GACTTGGCG            TTTTCCGTTTCGATA 100 62
CXD81_RS12165 NONE
        yaaA 2506309 .. 2506346 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
CXD81_RS12155 2504611 .. 2504625 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  61 494
CXD81_RS12130 2500404 .. 2500431 -  -7.6  -3.88291   GATGACTCCTAGAAA        CGGGCCGCATTG TACG CGATCCGACCCG         AGTTGATCTCAATCC  66 34
CXD81_RS12125 NONE
        plsX 2499095 .. 2499111 -  -4.4  -3.14211   AGCTTTTTCCATCAA             GCGG-TG TCCC CAGCCGC              GCCGGGCGCGACGGC  47 5
CXD81_RS12115 2498058 .. 2498105 - -11.9  -2.50816   TCGGTATGGAGGAAT GGCGG-CGTGCGCGGT-CGCGCA CAGG CGCGCGCAGCGCGCCCTTCCGCC TACATGCGGGCCAGC  61 25
        fabD NONE
        fabG 2496293 .. 2496326 - -12.3  -4.03234   GCGTTTCCACAGAAA     CGCGCGGCTGGGC TTGGATGG GCCGCGCCGCGCG      CTTCTCACTATTGCA  83 33
CXD81_RS12100 2495845 .. 2495865 -  -4.5  -3.55563   ACGGCATTCCTGAAA            CCGCCCCGA TTC CCGGCGCCG            CCCCGAAGTGTTCGA  52 72
        fabF 2494475 .. 2494509 -  -6.5  -3.69216   CGGTTATCGAAAATA    CCGC-CGTCCGGGTTCA ACT CAAACCCG-ACGAACGG    CCATCGAACCGTTGG  59 9
CXD81_RS12090 NONE
        rpoE NONE
CXD81_RS12080 2492874 .. 2492887 -  -2.3  -3.54408   GCGCATGTAAAGCAA               CGGTG TCAT CAACG                TCCTGCTCCGGCGTC  48 20
CXD81_RS12075 NONE
CXD81_RS12070 2490238 .. 2490262 - -22.9  -4.65895   CGGGCGAGCCAAAAA          CGAGGGGGCGC CAT GCGCCCCCTCG          TTGCGGCAACCAGCC 100 62
CXD81_RS12065 NONE
        lepB 2487477 .. 2487490 -  -3.7  -3.17392   TAGCGGTCAATGGAA               GCGGC CAAT GCGGC                TCAAATCGCTGAAGT  45 3
CXD81_RS12055 NONE
CXD81_RS12050 NONE
        recO NONE
CXD81_RS12040 2484136 .. 2484162 - -15.9  -3.14344   GATGTCGCGGACGAA        CAG-GCCGCGCG GGCC CGCGCGGCGCTG         GGCGCGCTGGGCATC  80 157
        lptF 2475459 .. 2475484 -  -6.1  -3.01791   ACGTGCTGCCCAACA         GCCAGGTGGTGC TGC GCAGCACC-AGC         GTCATCGCCCAGTAC  48 280
CXD81_RS11985 2473353 .. 2473366 -  -2.3  -3.14132   CTTGCCGCCGATCAA               TAGCG ACTT CGCTC                ATTTCTCTGCTCCTC  42 124
        mmsA 2471790 .. 2471813 -  -8.2  -3.15544   CTGCAGGTTCATGAA          TTGGCCCCTGT TAG AC-GGAGCCAA          TTATAAGTAATATAG  56 98
CXD81_RS11975 2470633 .. 2470667 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS11965 2469167 .. 2469184 - -14.1  -4.41895   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 77
CXD81_RS11950 2465629 .. 2465675 - -21.5  -2.62184   TGCTGGTGTAGAGCA GCCGGCGCTTGCCGGCGCGCGC ATCG GCGCGCG-CGCCCAGCGTCGGC ATGGTCAGCATGATG 100 294
         acs 2462312 .. 2462342 - -14.7  -4.17089   TGCAAAGCCGGAAAA      GGCACGGGCCGGTC ATGC GACCGGCCCG-GCT       GGCTACAGACTGACG  95 101
CXD81_RS11935 NONE
CXD81_RS11930 2460331 .. 2460356 -   -14  -3.28712   GCGGGCGGCTGAGAA         CGC-GCCGCGC TCAGC GCGCGGCCGCG         CAATGCCCGCGTACC  75 10
CXD81_RS11905 2455183 .. 2455222 - -14.2  -3.62597   GGTACGCGTGAAGAA  GGCCGGAATGCCG-GCGCC GCC GGCGCGCAGCTTCTCGGCC  AGCGTGCCCTGCGGC  80 439
CXD81_RS11895 2454126 .. 2454143 - -14.1  -5.75945   ATGGGCGAAAAAAAA             CGCCGGC TAAC GCCGGCG              CCTTACATACAAAAA 100 51
CXD81_RS11890 NONE
CXD81_RS11885 NONE
CXD81_RS11880 2450113 .. 2450136 -  -2.3  -4.71426   GGTTGAGGAAGAAAA          TGCGGCAGGC GCCAA GCC-ACCGCG          TTCAATACGCGCCGC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 2446565 .. 2446622 - -13.4  -3.48276   CGGCCCTGGAGATAA CAGGGC-CGCCGCGCGGGC-GGC-CCG ACCGGCG CGGCGCCTGCATGCGCCGCGCGCCCTG CCCTACTTGCGGTCT  75 28
CXD81_RS11860 2445465 .. 2445477 - -10.5  -3.38291   GGGAGAATGTCAGAA                GGCCG TCT CGGCC                AGCCACTGGCGCCAC  65 7
CXD81_RS11850 2442641 .. 2442651 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 194
CXD81_RS11845 NONE
CXD81_RS11840 NONE
CXD81_RS11835 NONE
CXD81_RS11830 NONE
CXD81_RS11825 2437413 .. 2437459 - -14.3  -3.09581   CAAACGCGGAAGACA GCGGT-TTCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGATTACTGA CCATTAACGCAGGTT  73 29
        ftsB 2436985 .. 2437000 - -10.4  -5.86332   CCAAGGCAAAAAAAA              CTCCCC TGGC GGGGAG               TGTTGGCGCGTCCGG 100 50
CXD81_RS11810 2434432 .. 2434452 -  -4.5  -3.04792   TGATCAGGCGCAAGA            GCGGCGTCA TTG CGGCGCCGG            GGAGCGACTGAGCCA  45 11
CXD81_RS11805 NONE
CXD81_RS11800 2433187 .. 2433214 -  -6.2  -3.39784   CCAGGCCGAACAACA        CGCGCAGCGCCTG GCC CAGG-GCTGGCCG        GGCGGAGCCGGGCCG  55 294
CXD81_RS11720 NONE
        sdhC NONE
        sdhD NONE
CXD81_RS11705 NONE
CXD81_RS11700 2412116 .. 2412126 -  -6.8  -3.01906   CCAATAAACACTAGA                 CCGT ACG ACGG                 ACCATCAGTTCCTTG  51 10
CXD81_RS11695 NONE
CXD81_RS11690 2410452 .. 2410465 -  -9.5   -5.4505   GCCGGCAAGAAAAAA               CCGCC CGAA GGCGG                TTCTTTCAGTGGACG 100 54
CXD81_RS11660 NONE
CXD81_RS11655 NONE
CXD81_RS11650 NONE
CXD81_RS11645 NONE
        potA NONE
CXD81_RS11635 NONE
CXD81_RS11630 NONE
CXD81_RS11625 NONE
CXD81_RS11620 2396059 .. 2396077 -  -5.2  -4.36914   TGCTGGCCGAGAAAA             TCACCGAC GCG GCCGGCAA             CATGGCGCCGACGGT  69 331
        rmuC 2394124 .. 2394163 -  -5.5  -3.90744   TTGGCGGCGAAAGAA  TTGGGCGGACCGCCCGCC CCGCC GG-GGGCTCTCCGCCCCC  GCGCCTGCTCCTCAG  63 37
CXD81_RS11605 2392447 .. 2392461 -    -7  -2.96984   GAAATTTAGCAGATA               CCGGGC CAG GCGCGG               GCCAGAATCGGGGCC  51 1
        rpiA 2391594 .. 2391622 -  -5.2  -4.07885   TAGTGCCCCTGAAAA       CGCGGTTGCGCAG AGGG CTGCCCGACC-CG        CAAGGTTATGACCCG  64 106
        phoU 2390573 .. 2390628 -  -8.1  -3.05596   CAGGCGCGGATTGAA TCGGCCTA-TGGCGAGGCGCCCG-CGC TGCT GCGGCTGGCGCCGGGCGAGCAGGCCGC CTGGCCATATGAACC  52 166
        hrpA 2383006 .. 2383046 - -17.6  -3.57263   ACTGGCACCCGCAAA CTCTCGGGGTGCCTGTCCC CGCA GGGACAGGCA-CCCGTGGG  ACAGCCCCCTACCGC  90 34
CXD81_RS11565 NONE
CXD81_RS11560 NONE
CXD81_RS11555 NONE
CXD81_RS11550 NONE
CXD81_RS11545 2374334 .. 2374365 - -13.6  -3.04144   TGTTCATCTGGAACA      GTCCCGCCGCGCCG GCCC CGGCACGGCGCGAA       TACGACGCGCCCTAT  69 250
CXD81_RS11535 2371901 .. 2371918 -    -4  -3.76641   AGCGCAATACGCAAA             CGTCGC TTATCC GCGGCG              GCGCCTGTCTTCATA  57 14
CXD81_RS11530 2370337 .. 2370365 -  -2.3  -3.27743   CATCATCAAGGAATA       CGC-CGGCCTGT TCGTCT ACTGGCTGCGCG        GCTGGGTGTAACGGC  44 438
        msbA 2366608 .. 2366624 -  -6.5  -3.53012   TGGCCGCCGCCGAAA              CCATGGC GCC GCAATGG              GCGCAACAGGTGTTG  55 148
CXD81_RS11500 NONE
CXD81_RS11495 2363341 .. 2363354 -  -3.7  -4.74103   GGCCGAACTGAAAAA               GGCGC TCTC GCGCG                ACCGCACGCGCATGA  77 418
CXD81_RS11475 NONE
CXD81_RS11470 NONE
CXD81_RS11465 2358567 .. 2358605 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD81_RS11460 2355332 .. 2355342 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 2355123 .. 2355157 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD81_RS11450 2351969 .. 2352022 -  -6.6  -3.76224   TGCCCATCTACGAAA CCGCCGCCCTGCTGCGCAGCGC-CGGC ATC GCCGTACCCTGAGC-G-ACGCCGGCGG CGCGCGGTCACCAGC  62 33
CXD81_RS11410 2345087 .. 2345119 -  -4.6   -4.1899   CCAGTGTATGCAAAA      CGCGGCGGCCGTCA CAATC TGCCGCCTGCCGCT      CAGCGTCGCCGCGAC  66 25
CXD81_RS11405 2343599 .. 2343621 -    -9  -3.03441   CATCACCGCCGAACA           GGTGCGCGAC ATG GTCGCGCGCT           TTGCCCGCACCCTGG  55 107
CXD81_RS11395 2340800 .. 2340858 - -15.8   -3.6106   TGGAATATGTCGAAA GCGGCCGGCGCGAAGGCGCGCGGCTGC GCATGG GCGG-CGAGCGCGTGCGCGCCGACAGC GGCGGCTACTACATA  85 396
CXD81_RS11360 2333311 .. 2333340 - -18.5  -3.09492   TCGCCAACGGCAAGA       CGCGCGCCCAGGC CGAA GCCCGCGCGCGCG        AACTGCTGACCCTGG  85 432
CXD81_RS11335 2326576 .. 2326624 -    -8  -3.67296   CATTATCGATCCAAA CGGCGCGCGCGGCCAAGCGCGGGC CCA GCCGGCG-TCAGGCGC-CGCTCCA GGCCTCGGCGTTCAG  63 11
CXD81_RS11330 2325376 .. 2325414 -  -8.7  -3.03159   CCAAGTCCGCCAAGA  GCGCGGGCGGCGGCGCGGC CGA GGCG-GCGGCCGGC-GCGC  ACTGAGCGCCAGGCC  55 49
CXD81_RS11300 NONE
CXD81_RS11295 2317555 .. 2317574 - -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 54
CXD81_RS11280 2314271 .. 2314285 -    -7  -3.01924   GACGCTGGCCGAACA               GGGCGG CGC CGGCCC               GCACCTGATTACCGC  52 478
CXD81_RS11265 NONE
CXD81_RS11260 NONE
CXD81_RS11255 NONE
CXD81_RS11250 2308320 .. 2308351 -   -10  -4.07568   CTGCTTCCGGGAAAA      TGGGCGGGCCGCCGC CGT GCGG-AGCCCGCCGC      CGATGCGGGATTACT  78 36
CXD81_RS11240 2306666 .. 2306710 - -15.6  -3.17075   CGCCGGGCAAGGCAA GGCGGCC-GAGCTGCTGGCGC AGGC GCGCCAGCTGGCCTGGACGCC GCTGGTCGACGCCGA  77 197
CXD81_RS11225 2303505 .. 2303526 - -15.1  -3.01712   CGCGCTGGTCGAACA           GGCCGCGGC GGCG GCCACGGCC            ATGGAAGAACAGGCC  74 197
        greA 2300697 .. 2300717 -  -9.6  -3.07104   CGACAACGATACAGA            CGCCCGGC GCACG GCCCGGCG            TTCAGGAATTCGGAT  57 238
CXD81_RS11205 2298664 .. 2298701 -  -7.5  -3.16742   CTGAACGCTCACGAA   CGCGACCTGCGCAGCCGC CTG GAGGC-GCTCAGCGCGCG   CGGAGACGGCGCGGT  53 203
CXD81_RS11160 NONE
CXD81_RS11155 NONE
CXD81_RS11150 2290998 .. 2291011 -  -3.1  -3.17444   GGAGAAACAGACATA               TCGAA CCTC CTCGA                ATTGAAATCTTGACG  44 58
CXD81_RS11145 NONE
CXD81_RS11140 NONE
CXD81_RS11135 NONE
CXD81_RS11130 NONE
CXD81_RS11125 NONE
CXD81_RS11120 NONE
CXD81_RS11115 NONE
CXD81_RS11110 NONE
CXD81_RS11105 NONE
CXD81_RS11100 NONE
CXD81_RS11095 NONE
CXD81_RS11090 NONE
CXD81_RS11085 NONE
CXD81_RS11080 NONE
CXD81_RS11075 NONE
CXD81_RS11070 NONE
CXD81_RS11065 NONE
CXD81_RS11060 2276828 .. 2276850 - -14.2  -2.70932   GCGCTGCGCGAACGA           GGCTACGACA GCG TGCCGTAGCC           CCCCTGCCCGGGCCA  69 44
CXD81_RS11045 2274633 .. 2274647 -  -5.6  -3.59262   GCCGAGATCGCGAAA               CGGCCT TGC AGGCAG               GCGATGCAGCAGGTC  54 514
CXD81_RS11025 2267689 .. 2267705 -  -5.1  -2.78463   ACCTTGCGCAGCACA              TTGTGCG CGA CGCAGAA              CCTGCCTGCCGGCGC  43 398
CXD81_RS11010 2265764 .. 2265814 -  -5.5   -3.7108   AGCTGGACACCGAAA TCTACG-ATCG-TGAGCTGGCCG GCTGGAT CGGGCAGCGCATCGACGCGCAGA TCCGCCACGCGCGGC  58 123
CXD81_RS11000 2264180 .. 2264202 -  -4.1   -5.4505   CCGCCCAAGAAAAAA          GCACCC-GGC TTGC GCCTAAGTGC           CTGTTTTCAAACGAA  90 47
CXD81_RS10990 2261012 .. 2261052 -   -11  -3.53012   GGGTCCCGGGCCAAA  GCGCGCAGATCCCGGCCG TTACC CGGCAAAAGCCTGCGCGC  AGGCCGCGCGCCCGT  70 65
CXD81_RS10985 2260361 .. 2260395 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS10955 NONE
        ectA 2251943 .. 2251953 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS10945 2250903 .. 2250925 -  -6.2  -2.78463   AGCGTGTGCATCATA           CGGCGCCA TTGTACG TGGCGGCG           CGCCGGATGCCCCCT  47 39
CXD81_RS10940 2250290 .. 2250335 - -11.7  -3.04144   CGGCGAGGGCGAACA GGCCTGAGGCCGCGCGGGCCTG GCT CAGGCCTGCACGTCC-CAGTCG CCGCGCCCGCGGGTG  65 4
        tsaD 2245889 .. 2245907 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 204
CXD81_RS10905 NONE
CXD81_RS10900 NONE
CXD81_RS10895 NONE
CXD81_RS10890 NONE
CXD81_RS10885 2239976 .. 2240003 - -15.5  -3.75153   GCGCGCCAACGCAAA        CGTCCCGGGGC GTTGCA GCCCCGGGGCG         TCATTCCTGCGGATC  85 49
CXD81_RS10880 2238930 .. 2238983 - -14.8  -3.55444   GGGCCATGCCGGAAA CGGCTGTCCGAGCGGACGCCCCGTCC CCCACC GGACGGGACGTCC-C-CGG-CAG-CG CCTCAGAAGGTCCGC  81 28
        rlmD 2237428 .. 2237459 -   -18  -3.25169   CGAAGAACTGAGCAA      CACCGGGCGGCG CTGAACGC CGCCGCCCGGCG       GGCCGCCTCAGGCAG  89 33
CXD81_RS10865 2236593 .. 2236646 -  -4.3  -3.52877   ATGAAGAGATGATAA TTGTTAGCTATCAATTAATAAAATTT AAT AAATCTAATTAATTGATAG-TCTCAA GCAATCGATCGCTAA  52 48
CXD81_RS10860 2235772 .. 2235795 -   -21  -4.32201   CGAAGGAAGGGAAAA          GCCGGCGGCG GCAG CGCCGCCGGC           CAGGCATCAGGCCAG 100 32
CXD81_RS10855 2234088 .. 2234108 -  -8.1  -3.53811   CTGACCGTGCGCAAA            CCCGCCGCC GAC GGCTTCGGG            CTGCACGGCAGCGGC  60 170
CXD81_RS10840 2230289 .. 2230335 - -20.3  -4.87626   GCCGAACAGGAAAAA GCCCGGCTGGTGCCG-TTCCTC ATGG AAGGAATCGCCACCAACCGGGC CATGTTCCAGGCCGA 100 116
CXD81_RS10830 2229055 .. 2229065 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS10820 2228033 .. 2228072 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD81_RS10810 2226718 .. 2226759 -  -7.9  -3.89354   GGTCGAAACGAACAA TGGCGTGGTGACGCTGACCG GCA CGGTCGGCACCGCCAC-CGA GGCGGATCAAGCAGC  67 268
CXD81_RS10775 2217506 .. 2217541 -   -19  -3.14132   CTGTCCCCGCAGGAA    TCCTGGTGCCTGTCCC CGCT GGGACAGGCACCCGGG     CACTCGGGCACCCGG  90 50
CXD81_RS10765 2215437 .. 2215458 -  -2.1  -2.87132   GGCCGCCCGCAGACA           TGCCCGCGC CGTT ACGCCTGCA            ACAAGGCCCGCAGTT  40 15
CXD81_RS10760 2214139 .. 2214167 - -10.1  -2.77994   CAGAAATTGCAACCA        TTTCCGCGCCGCC CTC GGCGGCGCGCCGA        ACCCGGCCGGCGCTA  57 38
CXD81_RS10755 NONE
CXD81_RS10750 NONE
CXD81_RS10745 2212070 .. 2212085 -  -6.2  -4.83722   AACAGCAGAATAAAA              TTGCAT AACC ATGCAA               CTTGATGCCATAGAC  86 490
CXD81_RS10735 2210647 .. 2210662 -  -8.2   -3.4247   AGAAGCTGAAGAAGA              CCACCG AAGG CGGCGG               CGCGCCGGCGCTGGA  61 343
CXD81_RS10710 2203241 .. 2203251 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS10705 2201820 .. 2201830 -  -2.4  -4.06419   TTTTGCTACAAAGAA                 CCGG CTA CCTG                 TATGCTGACACCCTG  58 432
CXD81_RS10695 NONE
CXD81_RS10690 2198051 .. 2198105 - -15.8  -2.61383   ACCGCTATTGAGAAT GGCCC-TGC--CGCGTCTTGCGCCAGC CGAT GCGGGCGCAAGACGCGAAGCTCAGGCC GTGATGATGTCCAGC  74 19
CXD81_RS10655 2188653 .. 2188672 -  -7.1  -3.42354   CAGGTCAAGGCAGAA            CTGGCCC AGGCCA AGGCCAG             CGGCCAATACACCTT  58 290
CXD81_RS10645 2186709 .. 2186730 - -14.4   -2.6155   CCTGGGAAGACCAAC           GGGCCGCC ATTATA GGCGGCCC            CGCGGCGCGGCCCGG  69 45
CXD81_RS10640 2186372 .. 2186398 -  -7.9  -5.06816   ATTGTCCAAGAAAAA        GCCG-GCGCGCC CGAT GGCGCGCTCAGT         GCGTCAGATGGCGCC  88 21
CXD81_RS10635 2185800 .. 2185811 -  -2.2  -4.05004   GCAGTAGAACAATAA                CGCGG ACG CCG-G                AGAAGGCACGGCACT  58 246
CXD81_RS10630 2185484 .. 2185499 - -11.8  -4.93547   CCAAGCAATGAAAAA              GCCCCC TGGC GGGGGC               TTTTATGGACGCGCT 100 48
CXD81_RS10625 2184626 .. 2184636 -  -3.2  -3.77808   GCGACCAGAACACAA                 GACA CCG CGTC                 GCTTGAAGATCTCGC  56 261
CXD81_RS10620 2184234 .. 2184259 - -16.9  -5.06414   GGCGCGCAACAAAAA         GCCCCACTGCC GCGA GGCAATGGGGC          TTTTTTCATGCGGCC 100 92
CXD81_RS10610 NONE
CXD81_RS10605 2181412 .. 2181438 - -14.4  -3.01924   TATCTCTGGTGAAGA         CGCGCCAGCC GGATGAG GGCCGGCGCG         ATCAACGCTTATCGA  72 78
        clpX 2180027 .. 2180061 - -19.6  -3.05819   CAGATAGCGGGAAGA     TGCAAAAAAACCCGTT ACA AACGGGTTTTCTTGCA     ATGGCGGCCGGGATC 100 46
CXD81_RS10595 2177382 .. 2177406 - -22.9  -5.45726   GATAGCCGAAAAAAA          CCGGGCCCGGA TGA TCCGGGCCCGG          TTTTGCGGGTCGCTG 100 59
CXD81_RS10585 2174886 .. 2174902 -  -7.2  -4.21827   TGAAACACGGGAAAA              CCGCCG GATCG CGGCGA              TGGCGCGCGGGCTCA  72 38
CXD81_RS10580 2173882 .. 2173902 -  -2.4  -3.16564   TTTTCATGGCATCAA            TCCGCCCG TACGC CGAGCGAC            TTGGCCAACGGCACC  42 1
CXD81_RS10575 2173421 .. 2173434 -  -2.3   -2.6563   GCGCTCAATAACGCA               GTTGC ATCA GCCAC                TCGGCCACCATCGCC  38 1
CXD81_RS10570 NONE
CXD81_RS10565 NONE
CXD81_RS10560 NONE
CXD81_RS10555 2170086 .. 2170113 - -11.3   -3.1876   AAGCCCATCCACGAA       CGCGCGC-GCCGG TCGG CCGGCAGCG-GCG        GCAATTCGGCCTTGA  64 125
CXD81_RS10540 NONE
CXD81_RS10535 NONE
CXD81_RS10530 NONE
CXD81_RS10525 2165664 .. 2165680 - -13.7  -3.65812   GGTGGGGCAATACAA              CGTGGCC GCC GGCCACG              CCGCGCTGAAGGCTC  80 47
CXD81_RS10515 2163785 .. 2163814 -    -2  -3.64703   TGCGGGGCATGTAAA       TCCCA-GCGCCGG GGTTG CCGGCGGGCGGCA       GCGGCTGCGCGTGCG  51 392
        uvrB 2158492 .. 2158506 -  -3.5  -2.70932   GCCTGTTTGTAACGA               GCGAA TTTTC TCCGC               TAATTTCCGTCTTTC  41 47
CXD81_RS10490 2157698 .. 2157713 - -11.8  -5.00616   CTCGGTCGGAAAAAA              CCGCGC AGTC GCGCGG               TTTTCTCATTTTGGG 100 96
        iscR NONE
CXD81_RS10480 NONE
        iscU NONE
        iscA NONE
        hscB 2154463 .. 2154483 -  -2.4  -3.32844   CGCGGCACCGCACAA            GCGGGTCA TCGGT TGCCGCGC            ATCGGGCCGGCCGCC  44 81
        hscA NONE
         fdx NONE
        iscX 2151945 .. 2151979 - -24.4  -3.53012   CGCGCGGCCCCGAAA     CGACAAGGGCCCCGTC CAT GACGGGGCCCTTGTCC     GGGCGGCGCGCCGGC 100 48
CXD81_RS10445 2150784 .. 2150818 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS10430 2147892 .. 2147911 - -12.1  -5.60993   CGGGCCATAAAAAAA            CCCCGCG GGGGTT CGCGGGG             CTCAAGCCAAACGCA 100 66
CXD81_RS10420 2145099 .. 2145122 -  -9.4  -3.15249   GATACCGTCGATCAA          GCCGTCGCGC GCCA GCGCGCAGGC           CGTGGTGACGTAGCG  59 364
CXD81_RS10410 2143449 .. 2143473 -  -7.2   -3.4072   GACCTGGCAGGAGAA          GGCGTCAA GAATAGCAG TTGACGCC          GGCCGGCACGAAATG  56 54
CXD81_RS10405 2142564 .. 2142577 -  -2.3  -2.70354   GGGGCTAGAAATCCA               GTTCG ATCT CGACC                GCGTCGCCCACGCGC  38 1
CXD81_RS10400 2142018 .. 2142045 - -10.5  -2.55253   ACGAATCGGAAGTGA        CCGCG-GCGCCC TTGCC GGGCGCGCGCGC        AACGGCCGTCAGGCC  57 34
CXD81_RS10395 2140884 .. 2140926 -  -7.7  -5.59357   ATGACATTAAAAAAA GGGCGGTATCCATTTGCACGC GCC GCGTGTGA--GGATGCCGCCC CGGGTTCCCGCGCCG 100 49
CXD81_RS10390 NONE
CXD81_RS10385 2138116 .. 2138134 - -17.4  -5.78622   GTACGCCAAAAAAAA             CCCGGGCC AGC GGCCCGGG             TCTGTTGCGTCGCCT 100 47
CXD81_RS10370 NONE
CXD81_RS10365 2135212 .. 2135224 -  -6.2  -3.30124   GTTGAGTTGTTATAA                GCGG ACTGA CCGC                TTTCAGCCGGGCGAA  53 28
CXD81_RS10360 2133558 .. 2133615 -  -3.1   -4.2679   GAATTTGCACGAAAA CGATCTCCTACGT-GCTGCGCGGCGCCA TGG CGGCGCCGCGCGGCGACTCAGTTCTTGG ATATTCCCCAGAATA  63 15
CXD81_RS10355 NONE
CXD81_RS10350 NONE
CXD81_RS10345 NONE
CXD81_RS10340 2128746 .. 2128764 - -17.4    -5.252   CATGGCCATAAAAAA             GGCCGGCC AGC GGCCGGCC             CGCAGCGCGTCGCGC 100 42
CXD81_RS10330 NONE
CXD81_RS10325 2124999 .. 2125019 -  -3.2  -2.62616   TCAGGGCCGATACCA           GCGCTGGCA GGAA TGCCC-CGC            TAGGAACGGGAAGTC  39 25
CXD81_RS10320 2124158 .. 2124174 -  -7.9  -3.63991   CACCATGTCGAAGAA              CAGCGCC TGC AGCGCCG              TGCGCCGTTGCGCGG  63 398
CXD81_RS10310 2121685 .. 2121710 -    -6  -4.15044   TCCTGCGTGAAGAAA         CGCCTGCCGA GGCTTA TTGGCTGGCG          TAGAAACTGACCAAT  66 13
CXD81_RS10305 NONE
CXD81_RS10300 2120209 .. 2120240 -  -8.7  -2.94218   ATTTTTGATTATAGA     GGGTCGGCAG-GCCG ATGC CAGCGCCGCCG-CCC      TACTCCTTGCCCGGA  54 25
        alaS NONE
CXD81_RS10290 2117260 .. 2117287 - -21.4  -3.01791   ACGCTCGCGCCAAGA        CAAACGGCCCGC TTGC GCGGGCCGTTTG         CTTGCCGGCAGGCGC 100 41
CXD81_RS10280 2115959 .. 2115977 - -10.2  -4.55295   TTGCGGACAAAGAAA             GCGCTGGC ATA GGCAGCGC             TTTCAAGAAATGCAG  89 139
        rimM NONE
        trmD 2114142 .. 2114154 -  -9.1  -4.08216   CGAGTCGGCCGAAAA                CAGCG TGG CGCTG                CGCTGCGGACTGGCC  72 400
CXD81_RS10230 2107697 .. 2107723 -   -15  -3.17075   GGCGTCTGAACGCAA         GGGCCCCCCGGC GCG GCCGGGGGTTCC         TGCCCATGGCAAGCG  76 85
CXD81_RS10220 NONE
        rlmN NONE
CXD81_RS10210 NONE
CXD81_RS10205 NONE
CXD81_RS10200 NONE
CXD81_RS10195 NONE
        bamB NONE
         der NONE
CXD81_RS10180 2095368 .. 2095382 -  -9.2  -2.52464   GTTTGTTTTAAGTGA               CGGCAC AGT GCGCCG               AAATCAGTACTCTAC  54 118
CXD81_RS10175 2095043 .. 2095072 - -17.2  -4.36595   GAGCCAAAGCGAAAA       TGCCCGCCGGCGC TGGCC GCGC-GGCGGGCA       ATCAAGGGTAATGCT 100 53
        hflX NONE
        hflK NONE
        hflC 2091592 .. 2091621 - -19.3  -4.98531   TGCCCAAACGAAAAA       CGGCTGAGAGGGC GTAA GCCCGCTCAGCCG        TATGCGGAATGTTTT 100 122
CXD81_RS10155 2090316 .. 2090326 -  -6.8  -2.55896   TTTACGAATCAATAT                 CGAG TTT CTCG                 GGAAATCCGGAAATC  47 76
CXD81_RS10150 2088967 .. 2089000 - -18.1   -3.9461   CCTGGCGAATAATAA     CCG-AGGCCGCGCCAC AAC GGGGCGCGGCCCGCGG     CGCCCTACCCCTTGA 100 30
CXD81_RS10145 2088172 .. 2088182 -  -3.2  -3.23452   ATGGCGACAAGCTAA                 GACA ACT TGCC                 GCATCAGTAGCACAG  46 195
CXD81_RS10140 2087828 .. 2087857 -  -6.5  -3.16055   CAAATCCTGGATGAA       TGATTCTGGAATC AATA GATTCGGGAATCA        GGCATCAATACAGGC  51 30
CXD81_RS10135 2085552 .. 2085577 -  -6.1  -4.24002   CCGCAAACCGCAAAA         GGCCATGCGCCG GCC CGGCACATG-CA         TGCCGCCACCCGCCA  70 260
        rpoD NONE
CXD81_RS10120 2082720 .. 2082745 - -16.9  -5.14626   ACCACCAAAACAAAA         CGGGCCTCGGA TTGC TCCGAGACCCG          CATGTTTACTTGGTA 100 36
CXD81_RS10110 2080952 .. 2080968 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD81_RS10090 2078173 .. 2078214 -  -6.3  -3.02511   GCTACCGCCTCAAGA CCTGAACGGCGCGCGCCGGC TCA GCCGGCCGGCGAC-TGCTGG CGCACCCACTGCATG  49 4
CXD81_RS10020 2067274 .. 2067286 -  -3.3  -2.52516   TTGCCGAGGACGAAT                TGCAG GCG CTGCT                GGAGGCGGTGCGGCA  39 62
        bioF NONE
CXD81_RS10005 NONE
        bioD NONE
CXD81_RS09995 2061894 .. 2061904 -  -8.2  -3.53444   CCAGGGTTTCGGAAA                 GGCC CAT GGCC                 ACGGGCGCGGTGACC  62 446
CXD81_RS09980 2060384 .. 2060423 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD81_RS09965 2055722 .. 2055736 -  -5.6  -3.78934   CCCGGGTTAGAAGAA               GCCCAG GGC CTTGGC               GCTGTAGCTCACCAG  60 2
CXD81_RS09950 2052466 .. 2052476 -  -8.2  -3.33162   CAGCGTATTCGAGAA                 CGGC AAT GCCG                 ACGCCACGTTGACCA  59 280
CXD81_RS09940 2050468 .. 2050484 -  -9.3  -2.75481   TGCCAATTCCAACCA              GGGGGCC GCG GGGCCCC              TGCCACCCAGGAGCA  55 392
CXD81_RS09930 2049119 .. 2049145 - -13.6   -3.7795   CCAAAGCCCAGCAAA         TGGCCGCCGGCG CGG CGCTCGCGGCCA         AGCGCGGCGAATCCA  82 280
CXD81_RS09920 2048106 .. 2048133 - -17.8  -3.02144   TTACCGTCGCCAACA        TCGCGGT-GGCGC TGC GCGCCTACCGCGA        AACCACGCTGCGCGA  82 361
CXD81_RS09910 NONE
CXD81_RS09905 2046394 .. 2046407 -  -4.5  -3.02144   GCAGGCGCTCGAAGA               GGTCA TCAC CGACC                TGCAGCGCCGCGGCG  46 208
CXD81_RS09885 2042029 .. 2042039 -  -3.2  -2.78816   CCAGCCCCTACGACA                 GCAC GGT GTAC                 GACCCGCCCAGCTAC  40 329
CXD81_RS09855 2037045 .. 2037060 -  -3.2  -2.52516   GCGTCGACCAGCAAG              GCCG GGCGATGG CGGC               GATCAATATCCGCTG  39 120
CXD81_RS09835 NONE
CXD81_RS09830 2033113 .. 2033141 - -10.2  -3.52073   GCTGCAATACCAGAA        GCAGCTGCGCCT GCACG AGGCGCACCGGC        TGATGGTGGCCGAAA  65 177
CXD81_RS09800 2026980 .. 2027004 -  -2.7  -4.07568   GGCGCCGGCGCAAAA          CAGTGTTGCAG CCG CCGCAATGCCG          TGCCCGCTGGTACGG  59 49
CXD81_RS09795 2025683 .. 2025729 -  -9.6  -3.68222   CGCCAATTCGAACAA GTCGCACGCGCGCCAGGTCG-ACG TGG CGCGCGACCTGGC-C-CG-GCAAC TGGCCGGCGGCGACC  68 224
CXD81_RS09780 2022790 .. 2022831 - -14.3  -3.19513   AGAACGGCAACCTAA CCCCCGGGTGCCTGTCCCC ACAG GGGGACTGGCACCCGCCAA  TTGCTTGCCTGTCCC  73 126
CXD81_RS09770 2020921 .. 2020931 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS09760 2018480 .. 2018508 -  -8.1  -4.10552   TTCCACTAAAGCAAA        TCCGACATGGC ACAGGCG GCCAAGCCGGA        CAACGGCACGCCGGC  69 395
CXD81_RS09750 NONE
CXD81_RS09745 NONE
CXD81_RS09740 NONE
CXD81_RS09735 2014635 .. 2014662 -   -14  -3.02144   GCAGGCCGCCGAACA        CGCCCGTCGGCC GCCA GGCCGCCGCGCG         CGCCAGCGCCGCGTC  72 225
CXD81_RS09725 2012485 .. 2012512 - -10.6   -4.2535   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC  89 104
CXD81_RS09690 2007178 .. 2007212 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS09655 NONE
CXD81_RS09650 1997833 .. 1997882 -  -5.6  -3.29144   GGATGGTGTTGATAA TTGTGCGCGGCCC--CCGCGGGCCG GCG CGGCCCGGTGTCAAGCCGCGC-CGA GTATTGTGATCGAAC  51 12
CXD81_RS09645 NONE
CXD81_RS09640 1995512 .. 1995528 -  -3.6  -3.14344   GAGGTGCTGCACGAA              TGGGGC CTGGC GCCCGA              GCGCGTGGCCGGCGC  45 102
CXD81_RS09605 NONE
CXD81_RS09600 1988221 .. 1988233 -  -3.3  -3.65046   GCCGGAGGGGAAGAA                CAGCG GGG CGATG                GCGATCAGCGCGGCC  53 82
CXD81_RS09590 1986163 .. 1986217 - -12.1  -3.01712   GGCTGGCGGGCAACA GCCACGTGTCGGCCGCGGCCTTGATGG GCG CCACCACGGCGGCGGCC-ATGC-TGGC CGGCGGCCCGGCTTT  67 277
        queF 1983016 .. 1983042 -  -7.9  -2.52464   TGCTGGCGCAATGGA         TCGCGATGCAG GCGCG CCGCACCGCGC         TGAACGCGGCTATTG  49 35
CXD81_RS09505 1966889 .. 1966928 - -11.3  -3.28712   CCTGGGGCTGGAGAA  CCGCCTGGCCGACCGCA TCGGCC TGCTGTCGGGCGGGCAG   CGCCAGGCGGTCAGC  66 387
CXD81_RS09415 1947852 .. 1947871 -  -3.4  -2.82595   TTGAACCACCGAAAC            GCGTGCGG CAAG CCGTAAGC             CACCTCAGGACCTGT  41 175
CXD81_RS09410 NONE
        rpmG 1947121 .. 1947142 - -18.7  -4.86731   CCTTGCCAAATAAAA           CGGCCCCGC CCTG GCGGGGCCG            TTCACCATGGCGCGC 100 68
CXD81_RS09385 1943294 .. 1943324 - -22.6  -3.85698   TCGCCGCCGCATAAA       CGAAGAGCCCGCCG GTG CGGCGGGCTCTGCG       GTTTGACCTGAGACG 100 49
CXD81_RS09380 NONE
CXD81_RS09375 1941454 .. 1941494 -  -2.4  -5.00884   ACTCGTGCGAAAAAA TAGGTAACGGACCGCGCCC GGCA GGGCGCGGGCGGTCAAA-A  CCATCGATTATAGGA  79 45
CXD81_RS09370 NONE
CXD81_RS09365 NONE
CXD81_RS09360 NONE
CXD81_RS09355 NONE
CXD81_RS09350 1935184 .. 1935194 -  -2.4  -3.01712   GCGTTTCCGGGAAGA                 CCTG TGC CTGG                 CGGCGGGCGCCGATA  41 104
CXD81_RS09340 NONE
CXD81_RS09335 NONE
CXD81_RS09330 1931596 .. 1931620 - -13.6  -4.09685   TTTTATTGCTCAAAA         CCCCGC-AGCC TCAC GGCTCGCGGGG          TTTTGTTTTTGGGGG  85 355
CXD81_RS09295 1923815 .. 1923833 -  -8.1  -3.20348   GCGAGTAATAGGCAA             GCGCTGC GAACA GCAGCAC             CCAGATGGCGAAGGT  54 285
CXD81_RS09280 NONE
CXD81_RS09275 NONE
CXD81_RS09270 1918570 .. 1918584 -   -10  -3.33696   GGCTTTTCCAAGCAA               TTCGCC AGC GGCGAA               ACCAGCGGCTACGCC  63 336
CXD81_RS09245 1915242 .. 1915262 -  -4.7  -3.62046   CCATTCGCCCAAGAA           CCTGGCCA TGGCGC TGGCC-GG            CGAGGCCGGCGAGCT  54 285
        acnB 1911673 .. 1911692 - -16.4  -4.91852   CGCAGCAAAAAGAAA            GGCCCGCC TTGC GGCGGGCC             TTTGTCATGGCCGAA 100 48
CXD81_RS09225 NONE
CXD81_RS09220 1910403 .. 1910413 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD81_RS09215 1909265 .. 1909277 -  -4.8  -4.07568   GGGGGCGCCTGAAAA                CTGG GACTA CCAG                GCTGGCAGCCTGACC  63 147
CXD81_RS09195 1905239 .. 1905259 -  -3.8  -4.09864   ATCGATGCGTCAAAA            GTTCCCGC GCGAG GCGGGCGC            CGGGCCGACGTGCTC  61 108
        acnA 1902342 .. 1902365 - -19.6  -5.26875   CGTCCAACGAAAAAA          CCCTCCGGCC AGCA GGCCGGAGGG           TTCGGGTCGCGCAGG 100 59
CXD81_RS09180 1900116 .. 1900136 -    -4  -3.79687   ACGCGGCAGAAAATA           TCGGCG-CGC ATG GCGGCGC-GA           TCCGGTCAGTGGAAC  57 31
        earP 1898963 .. 1898979 -  -2.2  -2.64274   AGGCTGTCAAAGTGA              GGCC TTGAGCACC GGCC              GATCCGGGCAAAGCA  38 60
         efp 1898264 .. 1898283 - -16.4  -5.75342   CCGGGGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG 100 56
CXD81_RS09065 1878102 .. 1878114 -  -5.5   -3.2614   GATGCCCCATACCAA                GCACA AAC CGTGC                CAGCTTTTTTCAAGA  51 256
CXD81_RS09045 1874860 .. 1874913 -  -8.8  -2.82623   CGGGGCGGAGAACGA GTAGGCGGGGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCG--TGCCAACCGTC AATCGTTGACGAAGT  54 24
CXD81_RS09005 1863593 .. 1863635 - -10.5  -3.40403   GGGGCTGGACGACAA GCAGGTGATGCAGGCCGCCC ATGC GCGCGGCGTGC-TCACGCGC GCTGTCGCGCTACTA  65 171
CXD81_RS08995 1860822 .. 1860865 -   -34  -3.06815   ATCCTCCTCAATACA GACGCGGGATGGTGGCGCCC ATGG GGGCGCCCCCATCCCGCGTC GAACGATCCAAACAA 100 41
CXD81_RS08990 1859287 .. 1859310 -   -21  -5.47399   GCAAGGCGAAAAAAA          GGCCGGCGCC CGAA GGCGCCGGCC           TTGCTTGCCCGCGGG 100 47
CXD81_RS08985 1858191 .. 1858221 -  -5.4  -2.71712   TGCTCGCCCTGAAAG      TCAGCCGGC-CCT GCGACG AGGTGCTGGCCGA       GGTCGTGCCCTAGGG  45 107
        pgaA NONE
        pgaB NONE
        pgaC NONE
CXD81_RS08915 1841839 .. 1841853 -  -5.6   -4.1891   CTGGCCGAACAGAAA               CTGTCC AGC GGGCAG               GCCGACCTGGTGGCG  66 180
CXD81_RS08900 NONE
CXD81_RS08895 NONE
CXD81_RS08890 1839046 .. 1839056 -  -2.4  -2.54523   GCAGACTGGAATGCA                 TGGG TTA CCCC                 TGGAGGTGGGTTTTC  38 19
CXD81_RS08885 NONE
CXD81_RS08880 NONE
CXD81_RS08875 NONE
CXD81_RS08870 NONE
CXD81_RS08865 1833417 .. 1833444 - -18.6  -3.11687   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC  90 189
CXD81_RS08830 1826471 .. 1826486 -  -3.2  -4.07568   CCGCGCGGTCGAAAA              GGGC GAGTTGCG GCCC               GATACCCCGGTGGAA  60 198
CXD81_RS08775 1817364 .. 1817385 - -14.5  -4.93696   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 209
CXD81_RS08735 NONE
CXD81_RS08730 1808988 .. 1808998 -  -2.4  -3.06796   CGCCAGCTTATTCAA                 GGAC TTC GGCC                 TTTTCGATGATCACG  41 7
CXD81_RS08725 1808007 .. 1808032 - -19.1  -4.55798   TACGCCAAATGAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 204
CXD81_RS08705 1803645 .. 1803674 - -22.3  -2.62616   CGATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACAC        TGGCCGCCGGAGTGG 100 87
CXD81_RS08695 1801421 .. 1801437 -  -5.7  -3.09803   CAAGGCCAGCGAATA              CCGCGAC AAC GGCACGG              TGGTCAATGTGCGCG  48 194
CXD81_RS08680 1798377 .. 1798409 -  -8.5  -3.61715   CATCCTGTCGAACAA    CCG-CCGCCATGCGCC GTTC GGC-C-TGGCGGGCGG     CGAGGCCGGGGCGAT  63 184
CXD81_RS08660 NONE
CXD81_RS08655 NONE
CXD81_RS08650 1790876 .. 1790887 -  -7.2  -3.27923   GGTGAACAGCAGCAA                GGCC ACCA GGCC                 GCTGGCCACCAGCGC  54 111
CXD81_RS08640 NONE
CXD81_RS08635 1787609 .. 1787628 -  -2.7  -3.58343   CCGACGAGCCGGAAA            CCGCGGC GAAGAT GGCGCAG             CCGATGACGTTGGTG  49 332
CXD81_RS08595 NONE
CXD81_RS08590 1763614 .. 1763631 -  -3.4  -3.73775   CCTATGGCCAGCAAA             GCCTGCA TAGCC TGC-GGC             GGCTGCACCGGGCCG  55 419
CXD81_RS08540 1756572 .. 1756584 -  -3.3  -3.13371   CAGGCCACTAATATA                CCGAA GCG CCCGG                CGAATAAAAATAGCG  44 76
CXD81_RS08535 1755676 .. 1755691 -  -7.5  -3.39895   GTCGGGAGGAACGAA              GCCGG AAACCG CCGGC               GCAAGCGGGCCCAGG  59 133
CXD81_RS08530 NONE
CXD81_RS08525 NONE
CXD81_RS08520 NONE
CXD81_RS08515 NONE
CXD81_RS08510 NONE
CXD81_RS08505 1748975 .. 1748995 - -10.4  -2.70932   GGGCGGGGTGAATCA           GCGCGGCGC GTTG GCGC-GCGC            CACCATGGCGTCGAG  57 2
CXD81_RS08440 1736092 .. 1736102 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS08435 NONE
CXD81_RS08410 1728626 .. 1728656 -  -5.2  -3.14602   TCTAGTCGACCAAGA       CCGGACGCGCTCCC TAG GGGAGCAGGCGCGC       CTTGACCTGCTGCGA  49 8
CXD81_RS08375 1720695 .. 1720705 -  -8.2  -3.21747   GGATGGGAGGAGTAA                 CGCG CTG CGCG                 GGCGCGTCGCGACGC  58 106
CXD81_RS08370 NONE
CXD81_RS08365 1718110 .. 1718124 -  -2.7  -3.75169   GACGACTCCATGAAA               CGGGG ACCGG CCACG               CGGGGCAGGGATTCT  53 39
CXD81_RS08360 1717222 .. 1717256 - -14.9  -3.63515   GCCCATCGGCAAGAA     GGTGGGCCTGGCCAC CGAAC GCGGCATGGCCCACC     TCGTCATCGACGAGC  83 64
CXD81_RS08285 1703436 .. 1703457 -  -3.6  -3.53012   CCCTGGCCGCCGAAA           CCCGCGAC CAGGGC ATCGCGGC            CAACGCGGTGCTGCC  49 205
CXD81_RS08265 NONE
CXD81_RS08260 1698482 .. 1698500 -  -6.7  -3.21416   CATGGCGACGATCAA            CGACCGCA GCGT TGCGG-CG             TCGGGCGGCGTCTTC  52 168
        arsH 1697242 .. 1697252 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 255
CXD81_RS08240 1695776 .. 1695810 - -17.1  -2.66316   CGTCCTACGACATGA    CGCCGCC-GGCCGCCA AGGA CGGCGGCCAGGAGGCG     CCGTGAGCGACGCCC  80 453
CXD81_RS08220 1692371 .. 1692388 -  -4.8  -3.16742   CTCAAGCCGGAGTAA             GGCCGCC GCTCA GGCG-CC             GGGAAACCGCATGGG  47 17
CXD81_RS08200 1688653 .. 1688664 -  -5.8  -2.62184   TGCCCGCTCAGACGA                TGCG CGTG CGCA                 AGGTGCCGATCTGCG  44 6
CXD81_RS08195 NONE
CXD81_RS08190 1686604 .. 1686614 -  -6.8  -2.94912   CCTTGAAGTTATAGA                 GCAG GTT CTGC                 CTGGATGCGCGGCGC  51 59
CXD81_RS08185 NONE
CXD81_RS08180 1684340 .. 1684351 -  -7.2  -3.14132   CCTGGTGCGCACCAA                CCCG CGCA CGGG                 CCGGCGCTCGCTCTA  53 253
CXD81_RS08170 1682763 .. 1682781 - -10.4  -3.68073   CAGTTCATGGAAGAA             TATACGTC ATT GACGTATA             TTTCAATCGCCAGCA  70 109
CXD81_RS08160 1682206 .. 1682231 - -13.3  -2.79831   GCAACCGCCAGCACA         CCGCCAGCG TGGTGCTG CGCTGGCGG          TTCTGAATCGCAGCT  67 45
CXD81_RS08150 NONE
CXD81_RS08145 NONE
CXD81_RS08135 1674034 .. 1674082 -  -7.3  -2.84192   GACATGAGCAGTACA CCCTTGCGGGCCGGGCGCGCGGCG GCGC CGCCGCGCG-CCGAAGCGC--GGC CGCTGGCCGGACTGT  50 439
CXD81_RS08080 1662424 .. 1662437 -  -9.5   -2.5092   GAATATTTTATGAAT               GCGCG CGGC CGCGC                GGCGCGGCCTGGAAG  54 61
CXD81_RS08075 NONE
CXD81_RS08070 1660381 .. 1660406 -  -9.7  -3.24232   CTCCCTTGAAAGACA         CGCTCCTGCCGA TTC TAGGCAGG-GCG         GCGGGCGGATCGGCC  61 120
CXD81_RS08065 1659529 .. 1659539 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS08060 1658498 .. 1658509 -  -5.8  -3.01712   GGCTCGCGCCGAAGA                TCGC GCCG GCGA                 CCGAGCCGACGCCGC  47 41
CXD81_RS08050 NONE
CXD81_RS08045 1656626 .. 1656636 -  -3.2  -4.09685   TCGTACGGGCCAAAA                 CACC TCC GATG                 ACGCGAGTGCCGCGA  59 252
CXD81_RS08040 1655697 .. 1655718 -  -8.7  -3.30771   CGAGAGCGTGCAGAA           CGCCATCGAC CAG GCCGA-GGCG           GTGGCCGACGATATG  58 328
CXD81_RS08030 1653407 .. 1653425 - -12.4  -3.57144   CGCTGCATTGGGAAA             GCGTCGAC GCG GCCGACGC             CGCGGCGGTGCTGGA  74 344
CXD81_RS07960 NONE
CXD81_RS07955 1634068 .. 1634103 -    -9  -4.70266   AACAGCAGGGAAAAA   GA-GGC-CCCGCGCCG TGCCCG CCGCGCGGGCGCCGTC    GTGCTGGACGGGCTT  86 94
CXD81_RS07950 1631747 .. 1631768 - -15.9  -4.77165   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 306
CXD81_RS07930 1628304 .. 1628322 - -10.2  -2.62184   CCTCGCTGGAGACCA             TCCGCCAC ATG GTGGCGGC             CGGGATCGGGGTGAC  55 278
CXD81_RS07895 1619306 .. 1619364 - -12.3  -4.06419   TTCGTGGACAAATAA GGCCGTGCGCCGCCA-GGAAAAGCCGCC TTCG GGCGGTTTTTCTTTGGCCGCGCGCCGGC GCCGTTCATGCGTCG  83 31
CXD81_RS07885 1617049 .. 1617076 - -15.6  -4.59773   TGCTACGGGGAAAAA        TGCAAAGCGGCC GGAT GGCCGCTTTGCC         GACAAACAAGGCAGT 100 107
CXD81_RS07880 NONE
CXD81_RS07875 1614520 .. 1614530 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS07870 1613197 .. 1613208 -  -2.2  -3.21099   CCGCCCGAGCACGAA                GAGCG CGC CGC-C                TACCTGGTCGAGGGG  43 333
CXD81_RS07855 1610389 .. 1610442 - -19.6  -3.01712   CCGGGCGGTCGAACA CCAGCAGGCGGCGGCC-CGGCAGGCCG AAC CGG-CTGCCGCGGCTGCCG-CGGCCGG GACGGCGCCGGCCCC  87 294
CXD81_RS07820 1601516 .. 1601544 - -11.6  -2.65298   GCCACGCAGGAGAAT        GCCGCCATGGCC GAGCA GACCGCGGCGGC        GGCGGCCTCGCTGGA  61 105
CXD81_RS07805 1597345 .. 1597380 - -20.4  -2.84602   GGCACTGCAGTAAAC    CCGCGTGCCTGTCCCC GCAC GGGGACTGGCACGCGC     TGAATCCGGGGTGCC 100 154
CXD81_RS07795 1595319 .. 1595334 -  -6.2  -3.07355   TTGAAACAACAACGA              CTGAAA AGGA TTTCAG               GGGCACCGGTCTATG  49 230
CXD81_RS07790 NONE
CXD81_RS07785 NONE
CXD81_RS07780 1594459 .. 1594471 -  -9.1  -3.28712   GTGCGTGTCCGACAA                GCCGT TGC ACGGC                GAGCTCAAATTGCCC  59 243
CXD81_RS07770 1591799 .. 1591820 -  -7.9  -3.61398   TGTGCTGTTCAACAA           TGCCGGGCGC GGC GCGCC-GGCC           GTGCCCATCGAGGAG  60 501
CXD81_RS07760 NONE
CXD81_RS07755 1589626 .. 1589636 -  -8.2  -4.09685   CCCGAGGGCGGAAAA                 GCCC CCG GGGC                 CAGCAAGCCCTCGCG  72 45
CXD81_RS07750 NONE
CXD81_RS07745 NONE
CXD81_RS07740 1586030 .. 1586056 - -13.6  -3.14132   TCGGGTGGCCAGCAA         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCCATCAAGCCCAAG  72 308
CXD81_RS07710 NONE
        bamC 1579988 .. 1580011 - -18.2  -5.78622   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 66
CXD81_RS07685 1574402 .. 1574430 - -20.3  -3.61398   CTGCGTGTGCAACAA        CTGCGCAACGCGC GCC GCGCGCCGCGCAG        GCCGGCATCAGTCGT 100 33
CXD81_RS07675 NONE
CXD81_RS07670 1571127 .. 1571137 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 72
CXD81_RS07665 NONE
CXD81_RS07660 1568586 .. 1568600 -  -4.2  -3.14931   GCGATTCGGTATCAA               TCCATG CAG CATGGC               CAAACACTCCAAACG  45 52
CXD81_RS07655 NONE
CXD81_RS07650 NONE
CXD81_RS07645 NONE
CXD81_RS07640 1564886 .. 1564911 -  -8.2  -3.40403   GCCGCTGGACGACAA         GGCGGCCGCCG ATGCG CTGCGGC-GCC         TGCGCGGCCTGGACG  61 483
CXD81_RS07630 1563779 .. 1563810 - -14.6  -3.02829   CAGAGGCGGGTAAGA      TCGAATGGCTGTAT GGGC ATACAGCCATTCGC       GCGCCTGGGGCGCAG  74 50
CXD81_RS07625 NONE
CXD81_RS07620 1562098 .. 1562132 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 264
CXD81_RS07575 1549439 .. 1549471 -   -20  -2.64616   CGGGGACGGAGACGA     CGGTGTGCCTGTCCC AGCG GGGACAGGCAC-CCG      CACGGGCAGGCGCCT  95 77
CXD81_RS07570 1547835 .. 1547869 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 201
CXD81_RS07535 1541563 .. 1541604 -  -2.1  -4.01411   TACGAAAAACTCAAA TCCGGATCGTGGATATGCGG GCG CGGCATCGCCGCG-TCCGCA CGCTTACTGTGCCTT  56 29
CXD81_RS07530 1540131 .. 1540153 -  -9.8  -3.28712   CTGGGTGGTGGACAA           CCAGCACGGC GAA ACCGTGCTCG           AACTCGACGCCACCA  63 207
CXD81_RS07445 1526436 .. 1526466 - -19.6  -3.14344   CAGGTGGTGCAGTAA       GGCGGCGACCGGCG CGG CGCCCGGCGCCGCC       CGCCCGCATGGAAAA 100 79
CXD81_RS07430 1523232 .. 1523275 -  -9.4   -3.0127   CGAGGGAATTACAGA TCGCCTGAGCGAGGCAGCGG CGCT CCCCTGCCTGGGTGAGGCGC GCGTCCCCGGTTTCA  57 38
CXD81_RS07425 1521829 .. 1521877 -  -3.5  -3.39449   TCCGAGCAACATGAA GGGCTC-CTTCGCGCGCGCCGC GGCAAG GCCGCGCGCGCGCCGTGCGTCG TGCGCCTCAGCTGGT  49 32
CXD81_RS07420 NONE
CXD81_RS07415 NONE
CXD81_RS07410 1519683 .. 1519703 -  -3.3  -3.35046   GCAGTCTCGGAAAGA            CGGATAT TCCCAAT ATACCCG            TTGCCCGGCGGTCCG  46 59
CXD81_RS07405 1518839 .. 1518873 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 411
CXD81_RS07360 1511705 .. 1511722 -  -8.3  -4.13767   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT  72 151
CXD81_RS07325 NONE
CXD81_RS07320 1503535 .. 1503545 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 383
CXD81_RS07310 1502417 .. 1502451 - -12.9  -2.61582   CAGGGCATTCAGAAG    CG-CGGACCTGGCCTT GTAC AAGGCCAAGGCCGACG     GGCGCAATCGTGTCC  62 105
CXD81_RS07265 1493115 .. 1493134 - -13.6   -5.5112   GGGACCAAGAAAAAA            GCCCCTGA CGGA TCAGGGGC             TTGCAATGTCTGGCG 100 36
CXD81_RS07260 NONE
CXD81_RS07255 NONE
CXD81_RS07250 NONE
CXD81_RS07245 NONE
CXD81_RS07240 NONE
CXD81_RS07235 1485735 .. 1485753 - -13.8  -2.61264   GGCTCCATGGACAAG             GCCGCCCG GAG CGGGCAGC             GGCCTTCCATGATGA  69 111
CXD81_RS07230 1484481 .. 1484498 -  -7.7  -4.18197   AGTGCGTATGGAAAA             CGCCGAA GATG TTCAGCG              TGCCTGGACCTTGGC  74 20
CXD81_RS07225 1482071 .. 1482096 -  -4.7  -5.29846   AACCCGAAAGAAAAA         CCCCGCAGA CGCTCGGT TCTACAGGG          GTTTCCTGGGTATTT  93 107
CXD81_RS07220 1481153 .. 1481164 -  -3.6  -3.12668   CATCTGGAGACCCAA                GCGC ATTT ACGC                 CGGCGTCGGCGCCTG  45 85
CXD81_RS07210 1479874 .. 1479911 -  -9.8  -3.05384   TTTTTCTGGATCGAA   CCGCCGGTCA-TCAGCC AGGAA GGCTGACCGGCCCGCGG   GCCGTTATGCGCCAG  60 30
CXD81_RS07200 1478965 .. 1479002 - -10.5  -2.59742   CGCAATGGCGACAAT   CCGCAACCGCCCGCAGTC CGG GAC-GCCGGCGTTTGCTG   CGTTGCGGCAAATTT  57 153
CXD81_RS07195 1478493 .. 1478512 - -10.6  -5.40072   CGTGCCGCAAAAAAA            GGCCGCCC ATCC GGGCGGCT             TTTTCATTGATTTGC 100 53
        trxB NONE
CXD81_RS07160 NONE
CXD81_RS07155 1469924 .. 1469934 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 77
CXD81_RS07150 1468902 .. 1468941 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD81_RS07145 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 1460158 .. 1460178 -  -6.7   -2.8655   GGCACGCATACTATA            CGCGCGCCG CTT CAGCGCAGG            CGGTCCAGCGCCAGG  50 16
        kdpE 1456440 .. 1456474 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 203
CXD81_RS07080 1450951 .. 1450979 -  -5.8  -3.33261   GCTCAAGGCCTACAA        GCGTGGCGCCGC GGGCA GCGCGGCCACGG        CCAACGTGCGCAAGA  52 186
CXD81_RS07065 1449178 .. 1449191 -  -9.5  -2.75183   AGTGGCAGTCAATGA               GGCGC GACA GCGCC                GAGGCATGATAAGGA  55 87
CXD81_RS07060 NONE
CXD81_RS07055 1446931 .. 1446956 -  -7.5  -3.16881   GATCGACGCCACCAA         CGCCG-GCAGCG TCG CGCTGCACCGCA         AGCTGGGGTTCGTGC  53 148
CXD81_RS07040 1442937 .. 1442966 - -22.3  -2.62616   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 97
CXD81_RS07000 NONE
        recN 1432902 .. 1432942 -  -2.3  -4.75776   AAGCGAACTGAAAAA  CATGGGCCTGAAGGCGACG TTT CCCCGCCTGAAGATCCTTG  ACATTTTTCGTAAAT  76 453
        bamE NONE
CXD81_RS06980 1431117 .. 1431129 -  -4.7  -3.29144   CGATGGCCGCTACAA                GCTGG CCG CCGGC                TGGCTGATCGATCAA  49 263
CXD81_RS06970 1429984 .. 1430005 - -14.5  -5.63236   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 37
CXD81_RS06925 1419398 .. 1419413 -  -3.2  -3.40403   CCCTTCGCAGGACAA              GGCTTC GTGG GAAGTC               GAGAATAGCGTCGCG  48 53
CXD81_RS06920 NONE
CXD81_RS06915 1416889 .. 1416904 -    -4  -3.90588   TATGGGGTAATGAAA              CTTCTGG AAT CC-GAAG              GGGTATCGCTGCGCG  58 426
CXD81_RS06790 1391748 .. 1391780 -  -8.9  -4.07568   GCGCTTTGGCGAAAA      GCCCGCCGACCGCGC CGC GTACGCGCGGCAGGC      CCGCTTCCTGGCGGG  72 179
CXD81_RS06775 1389140 .. 1389190 -  -7.2   -4.0162   GGGCCACAGGAGAAA CAGCGGCGCCAGCATCCAGTCGAG GAT CTCGCCCAGCAGCGAGCGCTGCGG CGGCGCGAAACTCGG  66 105
CXD81_RS06770 1387745 .. 1387760 -    -4  -3.71917   ATCTTAAATTTGAAA              CAATAG GTAA CTATCG               CGCGTACCAGCCCGG  54 61
CXD81_RS06765 1385884 .. 1385912 - -10.9  -4.60041   AGGGAGCTTGAAAAA        GCCGGATTGGCGC AGC GGTCCAACCCGGC        GGGGGATGGTTATCA 100 38
CXD81_RS06720 1377083 .. 1377096 -  -9.5  -2.70932   CTTCTTGTGCAATCA               GGCCC GCGC GGGCC                TAGGAGAGGGCTTCG  55 25
CXD81_RS06715 1375532 .. 1375554 - -19.2  -5.53288   CGCAAGGCAAAAAAA           GGCCCGACAC ATC GTGTCGGGCC           CGTACGGGGCACGCA 100 243
        rdgC 1373817 .. 1373842 -  -6.7  -4.68724   TGATCGAACAGAAAA         GCACG-CTGGCC GAG GGCCTGGCGGGC         GCGGACGTCATTTAC  82 434
CXD81_RS06680 1370747 .. 1370794 - -21.2  -4.15788   AACGTGCTCAAGAAA GGGGCTGAGCAAGGCGGCCGGC AGGC GCCCGCCGGCATGCTCAGCCGC ACTGGCGCTGGATCG 100 18
CXD81_RS06660 1368221 .. 1368279 -  -2.2  -4.33153   GCCAAGATCAACAAA CTGGAGCTGTAG-TCCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGCTTCCTCGGC-CC-G TGCGCGCGTGGACAG  65 78
CXD81_RS06650 1366255 .. 1366265 -  -6.8  -3.03159   CGAACGCGCCCAAGA                 CGCT GCG AGCG                 GTCATTGATTGGGCT  51 121
CXD81_RS06605 1358816 .. 1358850 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS06595 1356454 .. 1356466 -  -3.4   -4.2349   CGCGCAGATCGAAAA                TTCC TCGCT GGAA                CAAGGACTTGTCCAG  63 69
CXD81_RS06585 1355029 .. 1355063 -  -2.1     -3.94   GCAAGCCGTAAACAA    CGGGACGTCCTACGCCA AGC TGGCAT-GGACG-CTAG    GTGTGAACTGTCAAT  56 22
CXD81_RS06560 1351476 .. 1351510 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS06490 NONE
CXD81_RS06465 1332798 .. 1332842 -    -7  -3.67792   GTAGATTCAGGGAAA CCACGGGCACGACCGTCA-CC AAGT GGCTGAATGCCGAGCGCGTGG CGCGCGCCCAGCAGT  64 358
CXD81_RS06455 1330745 .. 1330792 -  -8.4  -2.55544   TCATCACGGAAGTGA CCATCGGCTTCAACTATGCGCTG GGC CAGGTCAC-GGTGACGCCGATGG CGCTGCTGATGACCT  51 224
        sulP 1325048 .. 1325063 -  -3.9  -3.54424   GGTGAGCGCCGGAAA              CAGCC TGACCG GGCCG               GGGCCGCTCGCCAGC  51 379
CXD81_RS06365 1312493 .. 1312506 -  -4.5  -3.54459   CCAAGTCGTCGCAAA               GCC-GG AAT CCTGGC               GACGGCCTGCCACCG  52 57
CXD81_RS06335 1306463 .. 1306484 -  -2.9  -2.65264   CGACCACGCACAGCA           GCATGCC-GT CGT ACTGGCTCGC           CGCCACCTACCGCCT  39 47
CXD81_RS06290 1295620 .. 1295637 -  -4.1  -4.31943   GGTACAGAAAAAAGA             TGAAGCG TCCC CGGTTCA              TGGCGGGCGGCGGGA  68 42
CXD81_RS06285 1294818 .. 1294841 - -16.7   -3.0806   GCGAAATCCGCAAGA          GGCGGCGCG CCGATC CGCGCCGCC           GGCGCGCGGGCCCGG  81 48
CXD81_RS06280 1293521 .. 1293531 -  -2.4   -4.4078   GCTGGCCAACGAAAA                 GCCC CAG GGCC                 AGACCATCGCGTATG  68 83
CXD81_RS06250 1286630 .. 1286653 -  -2.2  -4.07568   TTCGGGGCGGGAAAA          GGGGCTGGGC AGGC GCTCAGGCCG           CGGCGGCGCCTGCCG  58 18
CXD81_RS06245 NONE
CXD81_RS06240 1283912 .. 1283937 - -13.3  -2.57132   GGCGCCCGGGATAAT         CGATACGCCGC TGAC GCGGCACATCG          TGCAGGATCGCCAGG  66 269
CXD81_RS06210 NONE
CXD81_RS06205 1277510 .. 1277547 -  -2.5  -4.58395   CGCACGCTGGAAAAA   GCTGATCGACGAGCGCGG GAT CCGCGCGAATTGA-CGGC   CGCGGCCTCGTGCCG  70 112
CXD81_RS06190 1274328 .. 1274370 -  -3.9  -3.84406   CCGCTATGACAACAA CGATCCGCGCCCCTGGCTGG CCGG CCAGGCAGGCTGGCGGG-CG CGCGCTAATTCGGCC  58 339
        queE 1272250 .. 1272272 -  -4.8  -3.64703   GGCGGGTGACGGAAA           TCATCGCG CATCTCC CGCGATGG           GACGGACAGTCATGG  55 35
        queD 1271545 .. 1271569 -  -7.8  -3.31792   GTACGACGCCCACAA         CATCCCGGCGC TCAA GCGCCTGG-TG          GGGCAGGGCGCCAAG  55 266
CXD81_RS06150 NONE
CXD81_RS06145 1268289 .. 1268306 - -11.3   -4.1822   GCCGAGCCGAAGAAA             GTACCGC CCAG GCGGTAC              ACCGCCTTGGAGCGC  89 192
CXD81_RS06130 1265953 .. 1265980 -  -5.5  -2.53263   GCGATGCGCAATTGA        TCGGCG-CCGAC CTGGT GTCGACCGCCGG        GCAGGGCCGCGTGCA  42 428
CXD81_RS06115 NONE
CXD81_RS06110 NONE
CXD81_RS06105 NONE
CXD81_RS06100 NONE
CXD81_RS06095 1249813 .. 1249827 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
CXD81_RS06085 1247995 .. 1248041 - -12.1  -3.35679   GCGCGTCATCGACAA GCGGCCG-CGCTGATCGCGGCG GGTT CGCAGGGCGCAACGCCGGCCGC CATGGCCGGCGTTGC  73 45
        paaX 1237279 .. 1237304 -  -4.6  -3.62597   CGGACCGGGCAACAA         TGGCGGCGAC GCGCTG GTGGCGGCCA          CGCTGCTGCAGGCGC  54 497
CXD81_RS06010 NONE
        rsgA 1234275 .. 1234299 -  -4.3  -3.78419   GGAGGAAAGATACAA         GGCACC--CCG GGAGT CGGCAGGTGCC         TGTCCTCGTGGGGAC  58 56
CXD81_RS05975 1227755 .. 1227807 -  -7.4  -3.36054   GAAAGCCATAGAACA GGTCGGACGGCAGGTGCAGGCC CTGCGGGTC GGCCTGCGCCAGCAGGCCGCAC GCGGTGGTCTTGCCC  59 151
CXD81_RS05955 1223943 .. 1223970 - -11.2  -3.77119   CATCAACGAATACAA        GCGGCGC-CAGGC CCC GCCCGGGCCCCGC        ATCACGCCGCGCGCG  74 501
        argH 1219450 .. 1219467 -  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 49
CXD81_RS05920 1216548 .. 1216558 -  -8.2  -2.80622   AGATAGTCGATCATA                 GCGC GGC GCGC                 GGCCGGAAATCGCGG  52 10
        moaA 1215078 .. 1215088 -  -4.6  -3.05384   CCGCTGCGCACCGAA                 CGGC CAC GCCA                 GGACAGCCGCGAGGA  46 372
CXD81_RS05885 NONE
CXD81_RS05880 1207848 .. 1207866 - -13.8  -3.05463   AGCCCGCCGACTGAA             CGGCGGCG CTA CGCCGCCA             GGCCGTGCTGGCCGA  72 15
CXD81_RS05870 1206662 .. 1206677 -  -4.6  -3.14404   ACAGCAACTACGTAA              GGCTCA GGCC TGGGCC               AGCATGGTGGCGGCG  47 13
CXD81_RS05865 1205120 .. 1205155 - -13.2  -3.00298   CGTGGTAACTACATA    CCCGGGAGCCTGTCCC AGCG GGGACAGGCTCCCTTT     GCCGCGGCAGTCGCT  70 57
CXD81_RS05850 NONE
CXD81_RS05845 1201489 .. 1201507 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 297
        cadR 1197482 .. 1197492 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS05820 1195312 .. 1195326 -  -2.7  -3.57144   CCCTGCAGCTGGAAA               TGGCC CTGTC GGCCT               ACATGACCGAGCAAG  50 129
CXD81_RS05780 1187201 .. 1187235 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS05760 1183115 .. 1183125 -  -6.8  -3.40878   ACGAGGCGAACAAGA                 GCTC GGT GAGC                 GTGCCCGACAGCGCG  56 335
CXD81_RS05740 1176760 .. 1176780 -  -8.1  -2.62263   AGTCGGGCGAGATCA            CGCTGTCCG GCC CGGCCCGCG            AGATGCTGCACGATC  48 139
CXD81_RS05665 1152341 .. 1152361 - -15.4  -5.13343   CAATGCAAAATAAAA            GGCGGGGC ATGCA GCCCCGCC            TCAAATAATAACGAC 100 92
CXD81_RS05660 1151744 .. 1151759 - -10.4  -4.62069   CCGGCATGGCAAAAA              GGAGCC TTAG GGCTCC               TTTTTTGCGTTCTGG  93 81
CXD81_RS05630 NONE
CXD81_RS05625 NONE
CXD81_RS05620 1143334 .. 1143360 -   -15  -3.60865   GATTCTAAAGCAGAA         CGCCGGCTGCGC GGG GCGGCGCCGGCG         CGGCCGGGTCAGGGT  81 34
CXD81_RS05615 NONE
CXD81_RS05610 1142252 .. 1142268 -  -2.1  -2.64099   CGGTCCGAGCAGAAT              GAGACGC ATG GGGGCTC              CTGATGGGTTTGTTT  38 108
CXD81_RS05605 1141540 .. 1141598 - -13.8  -3.39895   TTGGCTAGCAATGAA GGCGGGCAGGGCG-CGCG-CGGCCGCGCA CCCC TGCGCGGGCGGCGCGGCGGCCT-CGCGGC GCGGTTTAGCTCTGC  77 31
CXD81_RS05600 1140715 .. 1140743 - -18.2  -2.84602   GCCAGGGTACCAAAG        CAACGTGCCGGC ATCGA GCCGGCACGTCG        GGGGGAGGGATTACT  86 36
        murJ 1139055 .. 1139087 -   -12  -4.20516   TGTCGATCCAATAAA      TGCAAAGACCGGCC GTAAG GGCCGGTCTTTGTT      GTGATTTTCACTATT  91 65
CXD81_RS05590 1137850 .. 1137873 -  -6.8  -3.58037   TATGAATTCGGCAAA          GTCAGACATTG TAT CAA-GTCCGAC          GGGGATTGCAAGCCC  58 74
CXD81_RS05585 1137497 .. 1137514 - -11.3  -5.45802   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTTGCCGTA 100 69
CXD81_RS05565 1134796 .. 1134806 -  -2.4   -3.7941   CATCGTGGAGAACAA                 GGGC GGC GCCA                 ACGGCAATATCGGCT  54 342
CXD81_RS05520 NONE
CXD81_RS05515 1124944 .. 1124956 -  -3.3  -3.07233   TGACAATGGGCAATA                TAGGC TTA GCCGA                TGCTCTTGGCGGCTT  42 18
CXD81_RS05510 1123152 .. 1123171 - -13.6  -5.40072   CGCCGGGCAAAAAAA            GAAGGCCC CGCA GGGCCTTC             TTCCGGCATGGGTGG 100 44
        pdxA NONE
CXD81_RS05500 1120596 .. 1120626 - -11.1  -3.06183   CTCAGCTCGATGGAA      GTGCGCGCCCG-CGC GCG GCGCCTGGCGCGC-C      AGTGCGGGCAGCTGG  62 459
CXD81_RS05440 1110713 .. 1110731 -  -5.8  -3.14931   TCGAGGCGTTAGCAA             GCGTGGCC GAT GGCAGCGC             CGGGCCCGGGCAAGG  49 98
CXD81_RS05435 NONE
CXD81_RS05430 1108124 .. 1108158 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CXD81_RS05405 1102776 .. 1102794 -   -11  -3.55444   CCTTCACGCTGGAAA             CGCTCGAC CTG ATCGAGCG             CCGCATGGGCGAAAT  71 424
CXD81_RS05395 1100030 .. 1100064 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS05370 1093685 .. 1093726 - -26.8  -3.54903   ATATAAAATGGATAA GACCCGATGCGT-GCCGGC AACGG GCCGGCGACGCATCGGGTC GGAAGGGAACGCGCC 100 62
CXD81_RS05365 NONE
CXD81_RS05360 1091886 .. 1091901 -  -3.3  -4.28548   ACGGAGTGATGAAAA              GAATC GTGCGG GATTC               AGCGGTGCGACATGC  63 24
CXD81_RS05355 1090987 .. 1091012 - -20.5  -4.56597   CGGCCGGGTGAAAAA         GCCAAGCCGCC CGAG GGCGGCTTGGC          GGGATGCAGGCCCGG 100 68
CXD81_RS05350 1090772 .. 1090817 -   -28  -5.84381   CCAGCAAGAAAAAAA CCAGCAAGAAAAAAGCCGCT TCCATG AGCGGCTTTTTTCTTGCTGG CCTTGTTGCTGGCCT 100 58
CXD81_RS05345 1089568 .. 1089580 -  -3.3  -4.11216   GCGCGACTCGGAAAA                CCAGC TTA GCTGT                GAACTGTCAATAGGT  59 18
CXD81_RS05340 1088350 .. 1088367 -  -5.5  -3.29144   CCAGCGGCGTCAGAA             CGCCTCT TCGT AGAGTCG              CGTGGCGTCGGCCAG  51 2
CXD81_RS05300 1082167 .. 1082195 -    -3  -3.30441   GAGTATTGGGGACAA       CGCGGCACGGCAC AATT GTGC-GCGGCGAG        AGTTTCGCAGTTTCT  46 101
CXD81_RS05295 1081293 .. 1081310 -  -5.5  -3.15544   GTCCAGCCCCAGCAA             CCGGCCGG CCA CCAGC-GG             CAACTCGATCTAATG  49 490
CXD81_RS05285 NONE
CXD81_RS05280 NONE
CXD81_RS05275 1077301 .. 1077340 -  -6.5  -3.17075   CGGCTCGTAAGGCAA GGCCGTGACATGGCC-GTA CGAA TACAGGCCATCGCACG-CC  TGCGCCTTGCGCATC  51 275
CXD81_RS05265 1075283 .. 1075293 -  -5.4  -3.25823   GCCTGTCTATATGAA                 CTTC ATG GAAG                 CCAGCTCGGAAAACG  51 6
CXD81_RS05260 NONE
CXD81_RS05255 1073164 .. 1073190 - -10.9  -4.52857   ACGTGTCATAGAAAA        CG-GCCAGGACA GCCT CGTCCTGGCGCG         CCAGCCGTCGCGGCC  95 46
        soxR NONE
CXD81_RS05240 1071486 .. 1071511 -  -5.4  -3.34398   GCGCGGGCGCAAAGA         CCGGC-GCACC ATCGG GATACAGCCGG         CAATACTGCCTTACG  51 57
CXD81_RS05235 1069090 .. 1069124 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS05220 1066644 .. 1066660 -  -4.3  -3.14132   CCGCTGCTCTACCAA              CTGAGCT AAC AGCCCGG              CGATTGCTGCCTGTC  47 140
CXD81_RS05215 1066543 .. 1066572 - -17.3   -5.0925   GCCGAAAAGCAAAAA       GGCCGTTAGTGAC TACT ATCACTAACGGCC        TTACAAATCATGGTG 100 36
CXD81_RS05170 NONE
CXD81_RS05165 1059673 .. 1059689 -  -5.8  -3.05596   CATGCCCTGAGCGAA             GGCG-GG CCGG CCGCGCC              GCTGATCACGTATTC  48 332
        panB 1057885 .. 1057900 -  -3.2  -4.07568   TGCCTGTGGCGAAAA              CCCTACG GCG CGC-GGG              AGCGGGTTTGCAGGA  59 253
CXD81_RS05150 1056241 .. 1056275 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 256
CXD81_RS05120 1050340 .. 1050359 -   -10  -3.33261   CCTGAACCGCGACAA            CGT-GGCGG TGG CCGCCGACG            CCATCGCCAGCGTGC  63 72
CXD81_RS05090 NONE
CXD81_RS05085 NONE
CXD81_RS05080 1041593 .. 1041613 -  -8.9  -3.46602   CCGTGGACATCACAA            TGGCGCAGG CGG CCCGCGCAA            GGTTACTCGGTACAA  60 84
CXD81_RS05070 NONE
CXD81_RS05065 1038665 .. 1038687 -  -6.9  -3.35679   CGGCGTGACGCACAA           GGCCGTGGC GCGTT ACCAGGGCC           TGCTGGTCGATGCCT  52 304
CXD81_RS05055 NONE
CXD81_RS05050 1035488 .. 1035510 -  -5.4   -3.7941   CACGGTCTACAAGAA           GCTGATCCGC ATC GCCGACCTGC           ACGACGTCAGCTCGT  58 115
CXD81_RS05035 1032597 .. 1032627 -  -6.8  -3.39784   GGAGCCTGAAGAACA      TGGCCGAGCA-GC ATCCCG GCACGCTCGGCCC       CAGCCTGGTGCGCCA  55 431
        gcvA 1028078 .. 1028120 - -10.5  -3.56092   GGAGCATCGCGCAAA GCGGCGACCTG-ATGGTGGC CATG ACCATCGCGCAGGCCGCCGC GGCGCTCACGCTGCC  67 412
CXD81_RS04995 1024982 .. 1025020 -  -9.6  -3.14132   GGCCTGGCCGAGCAA GTGCG-CCGC-CGCACCGG CATG CCGGTGCGCGCGGTCGG-C  GGCATCGCCGATCCG  59 213
CXD81_RS04985 NONE
CXD81_RS04940 1015738 .. 1015770 -  -3.4  -2.78463   ACCGCTGGCAGGAGA     CCCTCAG-CGGCC TGCCGTTC GACCGGCTGATGG      AGCCGGCCGAAGTGG  40 172
CXD81_RS04890 NONE
CXD81_RS04885 1007202 .. 1007212 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 64
CXD81_RS04880 1006040 .. 1006060 -  -2.4  -2.59267   GGCAAGGACACCAAG            CTGCCCGA TTACG TCGTGCTG            ATCTCGACGCTGGGC  38 163
CXD81_RS04865 NONE
CXD81_RS04860 1002679 .. 1002694 - -10.4  -5.86332   GCAAGGCAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 58
CXD81_RS04845  999931 ..  999950 -   -15   -4.8622   GCCGGCAATGAAAAA            GGCGGCTC ATGC GAGCCGCC             TTTTTCATTGCACGC 100 49
CXD81_RS04825 NONE
CXD81_RS04820  994735 ..  994763 - -14.6  -5.40072   GGCCGGCGAAAAAAA       GCCCCGCTGG-CG TGGT CGTCCAACGGGGC        GGCTGCATGGCGGGC 100 78
CXD81_RS04815  993209 ..  993237 -  -5.2  -3.36569   GGAAGCCGCCAAATA       CATTGACCGCCGC CAGG GCGACGG-CGACG        ACGCCCATGGTGCGC  53 231
CXD81_RS04805  991369 ..  991381 -  -4.7  -3.55622   GGGAACTGCTGGAAA                GCGGC GAG GCCGA                TGCCTGGAGCCTGGA  54 334
CXD81_RS04795  988253 ..  988263 -  -6.8  -3.31144   TCGCCATGGTCAGAA                 CGAC ACC GTCG                 CCGTGGCGTAATAGG  54 9
CXD81_RS04790  986853 ..  986869 -    -5  -3.15544   GGCCATCGTCATGAA              CGCCTC GGGTT GCGGCG              CCATGGTGAAGGAGT  47 489
CXD81_RS04765  968598 ..  968635 - -16.4  -3.61398   TGTCGGTTTCAAGAA   CGGCACCGACGGCAAT GTGAAG ATCGCCGTCGATGCCA    TCAAGGCCGCCTCGC  85 523
CXD81_RS04745  964939 ..  964960 - -18.7  -5.06414   GTGGCGCAATAAAAA           CGGCGCGCC TTGA GGCGCGCCG            GCATTCCGGGACGAA 100 49
CXD81_RS04715  960705 ..  960721 -  -5.7   -3.4277   AGGCAAGACCTACAA              CGAGGCC AAG GACCACG              GGTTCATGTACCAGC  55 128
        chrA  957887 ..  957908 -  -3.6  -4.11216   GGGCCACGTGGAAAA           GCCGCTGCC GGTAT GGC-GCGTC           GTCTACGACGATCCG  63 280
CXD81_RS04680 NONE
CXD81_RS04675 NONE
CXD81_RS04670 NONE
CXD81_RS04665  950857 ..  950876 -  -2.8  -3.23216   GCGCACCACGAGCAA            GGCATAGCC TCG GGC-ATGGC            GTCGACGACGCTGAA  46 280
CXD81_RS04655  949124 ..  949145 - -18.7  -3.28712   TTGGTTCGCCGACAA           CCCCCCGGG CTTG CCCGGGGGG            TTGTCGTTTGTGGCG  93 70
CXD81_RS04600  937766 ..  937777 -  -5.8  -3.01712   GGCCGCGCGCCAAGA                TGGC CATC GCCA                 GCCGCTTCCGTACCC  48 303
CXD81_RS04590  935459 ..  935469 -  -4.6   -4.0371   CATGTTCCATACAAA                 GGCA CGG CGCC                 GGCCATGGTGGACCT  63 455
CXD81_RS04560  931817 ..  931845 -  -5.3  -3.87373   GACAGCGCGGATAAA       CCAT-GCGCCCA TCATGG CGGGCGCAATGA        ATTGTCCAAATGTGC  60 141
CXD81_RS04550  929585 ..  929599 -  -3.5  -3.72576   GCGCGCCCGAGCAAA               CCGAC ATCAG GTCGA               AGCGGCCCTGCGCGC  54 348
CXD81_RS04520  923629 ..  923643 -  -3.5  -3.94746   TGAGATTCAAGCAAA              CGCTGC GCGT GC-GCG               CCCTCCGGCACATTC  59 63
CXD81_RS04515 NONE
CXD81_RS04510  920777 ..  920791 -  -4.2  -3.14931   TTCACGTTCGATGAA               GTGGTC AAC GACGAC               GACACCGTGCTCGAC  45 266
CXD81_RS04470 NONE
CXD81_RS04465  913071 ..  913082 -  -5.8  -3.78022   GGTAGAGGGATGAAA                CAGG AAGG CCTG                 GGACCGCTACTGAAG  60 183
CXD81_RS04455 NONE
CXD81_RS04450 NONE
CXD81_RS04445  909471 ..  909486 -  -8.2  -3.53444   TCACCGCGTTCGAAA              GCGCGG ATAT CCACGC               CGAGGCGCGGCGGCT  61 167
CXD81_RS04425 NONE
CXD81_RS04420 NONE
CXD81_RS04415  903962 ..  903998 -  -5.1  -3.02144   GCAGGGGCTGGAATA    CATAGACGGGCTGGT GCTGTCG ACCAACCGGCCGATG    CTGACACTGATGACG  46 127
CXD81_RS04405  899873 ..  899901 -  -4.4   -3.2614   CACCTTGCAGACCAA       CGCGACGCAGATG GTGC CGGCCGCG-CGCG        GCACCGCGGTGGCCT  47 226
CXD81_RS04380  893998 ..  894033 -   -24  -3.73224   TTAGTTGTTACCAAA    TGCGGCGGGCGCGCCC TGCA AGGCGCGCCCGCCGAA     GTGATCGCTCTGAAT 100 47
CXD81_RS04375 NONE
CXD81_RS04370  889437 ..  889488 - -18.2  -2.83677   AATGAATTCAGCACA GCCATTTGATATGGCCCCCG-CAAC CTC GTCGGCGCGAGCCATTTCAAATGGC GCCGATAGGCGGCCT  86 141
CXD81_RS04365  888705 ..  888727 - -20.6  -4.65895   CGCGGGACGGAAAAA           GCCGCCTGGC GGA GCCAGGCGGC           TTAAGGTGCTGCTAA 100 57
CXD81_RS04360  887743 ..  887780 - -12.5  -2.64155   GCTGGCGGAAATCGA   CGCGGCCCTGCATGCCC TGCC GGGCGTGGCGGGCGGCG    CCTGCGCCGTGCTGC  62 290
         mpl NONE
CXD81_RS04285  874866 ..  874881 -  -2.4  -2.64354   GTACATAGTGAGAAT              CCATCG GGCG CGGCGG               CGTCAGGAGCGCCCC  38 72
CXD81_RS04280  872918 ..  872937 -  -2.7  -2.76468   CAGGATCGAAGAGGA            GGAAGCG GAGCGT CGCACCC             GTGCATTTTAGGGCG  40 61
CXD81_RS04275 NONE
CXD81_RS04270  871131 ..  871141 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS04265 NONE
CXD81_RS04260  869198 ..  869221 -  -5.2  -3.28712   CGGCTCGCCCGACAA          TCCGGGCC TGGTGTTC GGCCTGGA           CCGTGGCGGATGCTG  49 374
CXD81_RS04235  865184 ..  865205 -  -9.3   -4.1891   GGCCGGCAAGATAAA           GCCGCTGGC GGTG GCCGGCGAC            AAGCGCCTGAGCGAC  75 332
CXD81_RS04210  858850 ..  858878 -  -8.7  -3.51032   ATTCGTGAAGCACAA        GATCCTGGACGCC ATC GGCGACCTGTATC        TGCTGGGCAAGCCGC  61 307
CXD81_RS04125  837713 ..  837723 -  -4.6  -3.30771   GCACATGCTCTACAA                 CCGC AAT GCGA                 TTTTCACGGGCGGCG  49 481
CXD81_RS04110  835412 ..  835424 -  -7.7  -2.54523   TGAGACGGGAAGGGA                CGTAC GCC GTACG                CCCTTTGGCCCGATC  50 43
        hppD  826214 ..  826234 -   -14  -3.60151   CGCCCGAAATGACAA            GGCCCACC GCGAG GGTGGGCC            TTACTCGCGCCAGGC  78 46
CXD81_RS04050  822320 ..  822332 -  -9.1  -3.18681   GGGCAAGGTCATCAA                CTGGC GCG GCCAG                GGCGAGGTCGTGCTC  59 384
CXD81_RS04040  820595 ..  820608 -  -5.2  -3.21099   CTGCTCTAGCATCAA               CGCG GTAACT CGCG                CGCAGTATTCATGCA  49 450
CXD81_RS04020  818424 ..  818439 -  -6.1  -5.24129   GGCGGGCACAAAAAA              GGCAC TTGGTG GTGCC               GTTTGGTTTTCTGTA  90 220
CXD81_RS04015  817861 ..  817875 -  -4.2  -2.94411   AGGTTGTCAAACAAT               TCCATG ATT CATGGT               CTCCTTAGTTCATGC  44 30
CXD81_RS04010  816305 ..  816322 - -14.1  -6.11644   CGAGGCAAAAAAAAA             CCGGGCC CGAG GGCCCGG              TTCGCGCCGGCCGGC 100 63
CXD81_RS04005 NONE
CXD81_RS04000  813495 ..  813534 - -26.5  -3.05384   GGCGGCCTGATCGAA  CG-GGCGCCGGCCGCCCG GGCTG CGAGCGGCCGGCGCCGCG  GCCTCAGTCGCGCAG 100 29
CXD81_RS03970  809465 ..  809487 -  -6.8  -2.53911   TGAAGCTGGAATTCA           CCGACGACGG CAT CCGCCGGCTG           GCCGAACTGGCATTC  44 243
CXD81_RS03940 NONE
CXD81_RS03935 NONE
CXD81_RS03930  802224 ..  802280 -  -7.8  -2.91264   GCGTCGATCCACATA TGCGGATGCGCACCGGCGCCGGCCGCCC ACA GCGCGCCCAGCGCC-GT-CAGGGCCGCA AGGCGGCGGCGAGTT  52 15
CXD81_RS03925 NONE
CXD81_RS03920  800639 ..  800651 -  -4.7  -3.23637   AACATATCAATTGAA                TCCGG CAC CCGGG                CGTGCAAAATTCGTC  49 56
CXD81_RS03915  798132 ..  798155 -    -3  -3.85698   GCCGCGCTGGACAAA          TGGTTGCAGG CGCG CCCGCAACTG           GCTGCCGCCGGCGCC  56 362
CXD81_RS03885  792582 ..  792600 - -17.4   -4.4078   CGCGGCCAAGCAAAA             CGCCCCGC CAG GCGGGGCG             TTTCGCGACACGGGA 100 48
CXD81_RS03880  792245 ..  792259 -    -7  -3.08371   GACATGGCCAAGACA               GGCCGC CGT GCGCCC               CTCAGTAGTTGTTGC  52 27
CXD81_RS03875  790910 ..  790943 -    -6  -3.34005   AATGAAGCCGGACAA     CGCGTA-GCACCATG ATCCG CACGGCGCGTACTCG     CCTTTCCCGCTTCAT  53 223
CXD81_RS03870 NONE
CXD81_RS03865 NONE
        metF  788150 ..  788160 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS03855  787018 ..  787030 -  -6.2  -3.01924   GAGCGCCGCCGAACA                GGCC TTTCT GGCC                GCGTTCGAGCGCTTC  48 141
CXD81_RS03830 NONE
CXD81_RS03825  779375 ..  779395 -    -4  -3.57561   GGCGAACTGTTCAAA           GT-GCTGGCC GTG GGCC-GCGAC           ATGCCCGAACCCTTG  51 94
CXD81_RS03805  774075 ..  774114 - -15.6  -2.64099   GGCTCCCAGCAGAAT  GGCGCAGCCGGCCAGCGCC AGC AGCGC-GGCCGCCCGCGCG  CGGGCGGCCCGGATA  74 277
CXD81_RS03800  772583 ..  772596 -  -3.7  -2.62263   AGCGCGCCTACAGCA               GCGGC TCGA GCGGC                AGCAGCGAGAACAGC  40 4
CXD81_RS03775  767930 ..  767972 - -11.9  -3.18681   GGCGAAGCGCAGGAA CCCGCGGCCCGGCCGGCCGGC GAC GCC-GCCACCCGTGC-GCAGG TCCAGGCCGAACTGG  64 354
CXD81_RS03700 NONE
CXD81_RS03695  755105 ..  755119 -  -3.4  -3.96327   ACGGTCGAGGAGAAA               GACCGG GCG CAGGCC               GCCATGAATTTCTGC  58 202
CXD81_RS03685 NONE
CXD81_RS03680  751705 ..  751739 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 280
CXD81_RS03660  745714 ..  745751 -  -7.6  -3.03124   GCTGATTCTTGAACA   CGGCTTGGTTGCCCGCC CAGCC GGCCG-CAACCTCGCCG   TTCCGGTTCAGCCAC  53 33
CXD81_RS03655  743066 ..  743102 - -12.9  -2.72144   CGATTCTTTCGAAAC    CCAGGACCGTCCGCCAG CGC CTGGCGGACTGCGCCAG    CCCTTGGGCATCAAA  67 73
CXD81_RS03645  741619 ..  741633 -  -4.9  -2.88249   GATATTGGTCACATA               GCGGC ACTCG GCCAC               GCCAGGCAGCGGTGT  44 173
CXD81_RS03625  738984 ..  738996 -  -2.6  -4.71426   CGGCGATGAACAAAA                GGCC GCCAA GACC                ACCGCCTTCGACTTG  76 434
CXD81_RS03525 NONE
CXD81_RS03520  717129 ..  717139 -  -8.2  -3.53012   CGCGGCCGGCGCAAA                 GGCC GCC GGCC                 GGGCCCATCGATGCG  62 50
CXD81_RS03515 NONE
CXD81_RS03510  714988 ..  714998 -  -6.8  -3.85817   ACGGTGCCGCAGAAA                 CTGG CGG CCAG                 CGCCGCCCCGCATTT  63 189
CXD81_RS03500  712686 ..  712696 -  -2.4  -4.19238   TTTTGAATCGGAAAA                 TGGC CGG GCCG                 CAATGCCCAACGGCG  62 92
        fahA  711231 ..  711258 - -21.4   -4.8622   GCCCGCAAGGAAAAA        GGTGCCTGTCCC GGTT GGGACAGGCACC         TTCGGCAAGCCGGAG 100 108
CXD81_RS03465 NONE
CXD81_RS03460  701265 ..  701295 -  -3.9  -2.57132   CTGCTGCGCGACAAG       GGCGTGCGG GAATTCGTCGAGG CCGCGCGCC       TGCTGCGCCAGCGCG  40 506
CXD81_RS03405 NONE
CXD81_RS03400 NONE
CXD81_RS03395  686506 ..  686524 -  -4.4  -2.62184   CCTCGCCCGAGATCA             TGGAGCGC GTG GTGCACCA             GGTCATCCGCGAGGG  40 362
CXD81_RS03385  683429 ..  683462 -  -5.1  -3.21099   CGGCTTGAGCACGAA     GGTGTTGCCGCAGGC CAGC GCCACCGGGAACATC      CAGCACGGCACCATC  49 495
CXD81_RS03375  680548 ..  680568 -  -3.8  -3.11459   AATACCAGCATGGAA            CTCCCTCG GGTTG CGCGGGCG            GGCCAGGCCCGCCCT  45 46
CXD81_RS03370 NONE
CXD81_RS03365  678393 ..  678446 - -15.3  -3.01712   TGGGCTCCTGGAACA CCATGGCCATGCGCGTGGCGCGCAG TTCGCG CCGC-CGCCGCGCGC-TGGCCGTGA CGATGTCCTCGCCCA  77 291
CXD81_RS03355  675604 ..  675614 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS03300  667129 ..  667169 -   -14  -2.80816   TCGCCAGCCACGATA GCCTGGCAGCT-CAGGCGC GAAT GCGCCTCCAGCCCCCAGGC  GCGGTCCAGCAAGGT  71 268
CXD81_RS03275 NONE
CXD81_RS03270 NONE
CXD81_RS03265 NONE
CXD81_RS03260  660288 ..  660315 -  -8.2  -3.78775   TGCGCCACCAGCAAA        GCCGCGGCCGCC CGCT GGCGGGCGAGGA         CGCCGACAAGGTCAT  67 131
CXD81_RS03185 NONE
CXD81_RS03180 NONE
CXD81_RS03175  642763 ..  642777 -  -7.8  -3.30771   GGACATGGCGCAGAA               CAGGCC GTC GACCTG               CGCCATGGCCAGGCC  56 163
CXD81_RS03165 NONE
CXD81_RS03160  639588 ..  639622 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CXD81_RS03145  635289 ..  635311 -  -4.8  -4.67982   TGCCACCGAAGAAAA           CCAGGCCATA CCC CATGACCTGC           CAGACGGATAAGGCC  75 224
CXD81_RS03135  633196 ..  633219 - -13.8  -2.54702   ACAGACGCGAAGGCA          GCTCGCTGGC CACC GCCAGCGCGC           GCCGGTGCGCACCCA  69 511
CXD81_RS03120  630546 ..  630556 -  -8.2  -3.53012   CTGCGGGCGCTGAAA                 CGGC CGT GCCG                 CGTCACCATCCACAC  61 275
        gloB NONE
CXD81_RS03100  627224 ..  627249 -  -3.3  -2.71712   TTGCCTTGCGGAAAG         GCCGCTA TTGTAGGAATTT TAGCGGC          TTGGCGGACGGGCGC  40 64
        fabI  626348 ..  626376 -    -6  -3.78419   GGAGGAAAGATACAA        GGCACCGG AGGTCGAATTTGG CCGGTGCC        AGTCCCCCTACGGGG  62 57
CXD81_RS03090  625092 ..  625121 - -17.9  -2.62616   CGATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACCC        TCCCTGCGGGGACAG  85 56
CXD81_RS03080  623366 ..  623399 -  -8.9  -3.53091   ACCTGGCCGGCGAAA     TGCTGC-GCCAGGC CAGCGGC GCCTGGTTGCAGCA     CGTGCCGTATCGAGG  61 460
CXD81_RS03060  619618 ..  619628 -  -4.6  -4.12188   TCATCAGGGCGAAAA                 CCGG TAG CCGA                 TGCCCCACACGGTCT  62 3
CXD81_RS03055  618127 ..  618179 - -14.1  -3.33696   GTGTTCGGCAAGGAA CGCCGGCCGGTGCCGCTCTTGCCGCC GCCG GGCGCCT-GA-CGGCG-CGGCCGGCG GGTCAAGCCTTCGCA  75 28
CXD81_RS03040  613796 ..  613833 - -16.9  -3.18274   TGGATTGGAATGGAA   GCGCCGGCCGCCGGCCCG AAG CGGAG-GGCGGCCGGCGA   CAGCGGATTGTCGGG  84 85
        minC  612823 ..  612841 -  -2.4  -3.86346   TTATGTGCGTACAAA             TCGCGTTA TCG TAAAGCAA             AAAGCGTATGAAGGC  54 87
        minD NONE
        minE  611536 ..  611554 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 191
CXD81_RS02975  601203 ..  601222 - -10.6  -5.50499   TTACAGGTAAAAAAA            CCGCTGGC CCTT GCCGGCGG             TTTTTTTATGCGCGG 100 49
        uvrA NONE
CXD81_RS02960 NONE
CXD81_RS02955  593105 ..  593147 - -14.1  -3.07935   ACGGCAGGCACGGAA GTTTGCCGGTGCCAGTCCCC CTGC GGGGACAGGCACCGG-AGTC AGTGGTATTGCACCT  72 24
CXD81_RS02950  591431 ..  591446 -  -2.4  -3.01712   GGCGGGTCGTCAATA              TCGGCA GCCG CGCCGC               GCTGGGCAAGCCCGG  41 437
CXD81_RS02935  588319 ..  588353 -  -5.4  -3.53811   GGGACTGCGGGCAAA     GAGCCGGGCGGCGGAC ATG GTCAGGCGGCAGGCGC     GGCGGCGAGCAAGGC  54 11
CXD81_RS02930  587076 ..  587100 -  -9.1  -3.01712   GCGCCGGCGGCAAGA          CCGACCCGCTG GCG CTGCGCGCCGG          CGACCTGTCCGAAGC  55 524
CXD81_RS02920 NONE
CXD81_RS02915  584382 ..  584399 -  -2.6  -3.05463   ACCGGCTGGATGGAA             GGCTGT CAGTGT ACCGCC              AACGCCGCGCCCGCG  41 52
        pdxH NONE
CXD81_RS02905 NONE
CXD81_RS02900 NONE
        purU  581099 ..  581113 -  -5.6  -3.05384   CGTCCCTGCAGGCAA               CGGCCT TGC AGGCGG               CCTTGCGCCATTTCG  46 65
CXD81_RS02870  575241 ..  575265 - -12.8  -3.65902   GCGATGCCAGTGAAA          CGCGACGCGC CGGAT GCGCGTGGCG          CGAAACTGCACTTGC  77 90
        apaG  568963 ..  568993 - -10.3  -4.13945   ATGCGGATCGGAAAA       TCACCGTGCCGGG AGGAG CCCGGCTCAGTGC       AGTGTACGCGGCATG  78 19
CXD81_RS02830 NONE
CXD81_RS02825  566481 ..  566505 -  -3.4  -3.08032   TGCTCCTGAAAACGA         CGGCC-CGCTC AATT GCGCGAGGCCC          CTTCGATGAGTTGCC  44 9
CXD81_RS02820 NONE
CXD81_RS02815  564442 ..  564476 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 207
CXD81_RS02795  560960 ..  560974 - -11.4  -3.57144   GTGCGCACGCGCAAA               CAGGGC GAG GCCCTG               GCGCTGGCCACCGTG  71 267
CXD81_RS02785  558556 ..  558575 - -16.4  -3.75153   GCGCGCCAATGGAAA            CGCCGCGC ATGC GCGCGGCG             TCGGCAATCGGGCGG  88 81
CXD81_RS02765  555182 ..  555194 -  -3.3  -3.04792   TCACGATGGTTAATA                TCGCT ACG AGCGC                TTGCGCAGCATCAAT  42 16
CXD81_RS02760  554196 ..  554216 - -14.7  -2.52676   GATCTTGCTAACGGA            CGCCCGCCA CCA TGGCGGACG            CCGAAAATTTGGGAT  71 40
CXD81_RS02755 NONE
CXD81_RS02750 NONE
CXD81_RS02745 NONE
CXD81_RS02740  551056 ..  551094 - -12.2  -3.53012   GCTTTCCTGTTGAAA   CGGCTTGGCGGGTTCAGC CGG GCTGTCCCCGCCCTACCG   TAGGATGGGCGGCAC  74 67
CXD81_RS02735 NONE
        atpD NONE
CXD81_RS02725  548197 ..  548224 - -18.6  -2.91924   GGATGCGCCAGAAAC        GACAAAGGCGAC CGAA GTCGCCTTTGTC         TGCCTGACGCGGCGG  89 58
CXD81_RS02720  547112 ..  547141 -  -2.2  -3.09581   CAAAGGGGCAACAGA       CACGACTATCC TTGGTGATC GGA-AGCCGTG       ATTTTACTGCCCTGG  42 74
CXD81_RS02715  545829 ..  545846 -  -4.1  -3.60048   CTTTGGGGAAAAAAC             GCTAACA AGGG TGTGAGC              TTTCAGGGTCGTGCC  51 217
CXD81_RS02710  543601 ..  543627 -  -5.7  -2.62184   TGTTCGGTCAGAGTA        CGGGTTCGAGCG CCGG CGC-CGGCCCCG         CTCAGATCTCCAGCG  44 27
CXD81_RS02705  541472 ..  541482 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS02700  540363 ..  540404 -  -8.5  -3.14132   CTGTCCCTGCACCAA GGGCGTGGGTGCCTGTCCC CGTG GGGACAGGCACCTTGTTCC  CCCCTCCGCAACGCC  56 89
CXD81_RS02650  529242 ..  529254 -  -9.1  -3.33696   GCTGCGCGTAAGCAA                GCGCA TGC TGCGC                CAGGCCGACCGCGCC  59 219
CXD81_RS02635  526845 ..  526859 -  -2.7  -4.21607   TCGAGGGAATATAAA               GTGGG ATGGG CCCGC               GCGGCGTCAGATGCG  63 32
CXD81_RS02630  525663 ..  525677 -  -3.4  -3.78934   CGGCGCGCACAACAA               CGCGGC TGC GCTACG               CGTACGCCTTGAGGG  56 21
CXD81_RS02615  522228 ..  522241 -  -2.3  -3.07935   ATTCTATCCATTGAA               CTACG GGCG CGAAG                AGGCGACATTGTACC  41 184
CXD81_RS02610  522162 ..  522177 -  -4.6  -3.53224   TAGGGCCTTGGGAAA              CTGGCG CGCC CGACAG               GAATCGAACCTGTAT  52 11
CXD81_RS02605  521064 ..  521074 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS02600  519895 ..  519917 -  -5.5  -3.15579   GCAACCGGGGAGCAA          GGCGCACGCC GGCC GACGC-CGCC           ACGGCGCATGGGCAG  49 168
CXD81_RS02595 NONE
CXD81_RS02590 NONE
CXD81_RS02585  516346 ..  516382 - -10.9  -3.15544   TTCGACGCCGACGAA   GCGCGGCGCA-TCG-GC TTCGT GCGCGACTGCGCCGCCC   AGGCGCAGTGGCCCG  64 217
CXD81_RS02565  512946 ..  512998 - -27.1  -3.02144   CCAGGCGCTCGAAGA CGCCGCCTGAAGCGCGGCGGCCGC CAGCCC GCG-CCGCCGTGCTTCAGCCGGCG TTGGGCGCGGCCCAG 100 16
CXD81_RS02550 NONE
CXD81_RS02545  508387 ..  508416 - -11.3  -2.62263   ACGTCGCCGACACCA       GCGCCATCCAGCG CACC CGCTGGCCGGCGT        CGGGAAACAGGTCCG  59 509
CXD81_RS02535  506069 ..  506121 -  -9.2  -3.04501   ATCAATTCCGCAAGA GCCTCATGCAG--GCCGCCGCGCGCG GCGTG CGCGTGCGGCTGCTACTGCA-G-GGC AAGCCCGAATACCGC  55 403
CXD81_RS02480 NONE
CXD81_RS02475 NONE
        lptC NONE
        lptA NONE
        lptB  490640 ..  490655 -  -3.2  -3.66288   TATTGGCCAATACAA              GTTGCG CTAG CGCAAG               ATTGTGTACGTTTGA  53 108
CXD81_RS02450 NONE
CXD81_RS02445  488372 ..  488384 -  -4.7  -2.71144   CAGCTGGGGCAACCA                GGCCG GCG CGGTC                ACGCCGCTGGACGTG  43 127
        rapZ NONE
CXD81_RS02425  484351 ..  484361 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS02420  482897 ..  482931 -   -10  -3.41229   ATAGTTCGAGCAGAA    CCTGGCGCGC-TCGC TCAGCG GCGAGGCGCAGCAGG     ACCCGGCGCAACCGG  65 441
CXD81_RS02360  471911 ..  471932 -  -7.3  -4.61873   GCGCACAAATGAAAA           TGCCCAG TGCAAGGG CTGGGCA            TCGAATTCTTGGTGG  79 35
CXD81_RS02315 NONE
CXD81_RS02310  456395 ..  456450 -  -7.4  -4.18197   AGGCGTGATCGAAAA GCA-GGTGGCCATCGTCGCGCCGGCCA AGG TGGGCAGCACGCTGACGGCCATCGTGG AAATCACGCTGGACG  73 304
        glmS  453894 ..  453932 -  -8.1  -2.56715   ACCTGGACGAATGCA  CCATCGGGCGCGACAAGGC CGT GCAGCG-CGCG-CCGATGG  ATATCGCCCGCCTGC  48 330
CXD81_RS02280 NONE
CXD81_RS02275  447640 ..  447694 - -20.2  -2.50779   ATGACAAGCCAACAG CATGCCGGCG-GC--GCGTCGCGGCAA GGCC TTGCCGCGACGCATGCGCGCCAGCCTG GGCCGCCTACTGTCA  95 38
CXD81_RS02270  446180 ..  446191 -  -7.2  -3.51934   GCCCCTGCAGAAAGA                GCGC TGGA GCGC                 GGCGGTCGATGTGGT  58 449
CXD81_RS02260 NONE
CXD81_RS02255 NONE
CXD81_RS02250 NONE
        argE  441502 ..  441551 -    -2  -3.50133   TAGTTGTAGAAAAAG CGCCACCGTCATGGA--CCGGACC CGAA AGCCCGGCGTTCGTGACGGGGGGG TACATCACCACTACC  48 74
CXD81_RS02240  440417 ..  440441 -   -20   -3.3514   ACCGACACGGCACAA          CGGGCGCCCG GGCCG CGGGCGCCCG          CCGCGATCAGTCGAT 100 32
CXD81_RS02235  439083 ..  439100 -  -5.5  -2.71712   GCCTCTCGCTCAAAG             TCCCAGG ATGG CCTTGGA              AATGATGTTCTTCTG  45 2
CXD81_RS02230  437772 ..  437791 -  -3.4  -3.65812   CCCCGCCGAACACAA            CGTCGGCC ACCT GTACGACG             CCAAGCCCGAACTGA  51 167
CXD81_RS02215  433848 ..  433858 -  -8.2  -3.35813   GGTGATGGGAACGAA                 GCGC TCG GCGC                 CGAAGAAGTTGCCGA  60 176
CXD81_RS02205 NONE
CXD81_RS02200  432118 ..  432152 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS02185  428127 ..  428144 -  -3.3  -3.08464   CTACCACTGAGCTAA             CCACCCC GAAA GAGGCGA              AATTCTAGCACGAAA  44 73
CXD81_RS02180  428015 ..  428049 - -19.5  -3.54489   GGAAGCGGAAATGAA    GAAGGGCCGGT-GCTT TTGC AAGCGACCGGCCCTTC     TGGGATGCTGGTGGG 100 34
CXD81_RS02175  427501 ..  427527 - -11.5  -2.78384   CGTTGTTCGACGATA         GCCCAGGCCTG GCGCA CAGGCCCGGGG         ATGCGCACAGACAGC  62 101
CXD81_RS02170  426051 ..  426096 -  -7.4  -3.86822   GAAGCCTTCGAGAAA CTGGGCGCGCCGCC--CCTGCC CGAG GGCAGGTAGGCGGCTGGCGCCG GGCTAGAAGAAGCTC  66 28
CXD81_RS02145 NONE
CXD81_RS02140 NONE
CXD81_RS02130 NONE
CXD81_RS02125  416964 ..  417001 - -14.7  -3.15699   ACGCATCTATGAAGA   TGCCGTGGCCGACTTCG TACG CGACGCCGGCCGCGGCT    ATGCCGGCCGCCAGG  77 87
CXD81_RS02100  413392 ..  413419 -  -3.9  -2.78996   CATCCTGATCGAAAT        GGGCAGGCCCG TCTGCG CGCGCCGTCCC         GCGAACCGCCGCTGC  41 41
CXD81_RS02095  412313 ..  412351 -   -13  -3.52093   ATATTGGAACCATAA   TCCGCGGCACCCGGCCCA TAT TGCATCCGGCGCCGCGGA   TTGCGGGCGGGCCAT  77 53
CXD81_RS02090 NONE
CXD81_RS02085 NONE
CXD81_RS02080  408606 ..  408616 -  -5.4  -2.94924   CCTGGATGGAGAAAG                 CTCT ACC AGAG                 GCTCATTCCTTGTAC  47 28
CXD81_RS02075 NONE
CXD81_RS02070  405917 ..  405945 - -11.7  -3.81755   ACGCGTGAAACAGAA        GCAGGGTGTTCAC GAT GTGAACACCCAGG        GACGGGCGCCGGCTT  79 59
CXD81_RS02065 NONE
CXD81_RS02060 NONE
CXD81_RS02055  402631 ..  402647 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  60 494
CXD81_RS02040  399694 ..  399718 -  -9.2  -3.64822   ACCGGTGTAGCCAAA         GCGGGCCAGCG TCTG CGC-GGCCAGC          CGCGCGCGCGGGTCG  68 347
CXD81_RS02030 NONE
CXD81_RS02025 NONE
CXD81_RS02020  395162 ..  395218 -  -6.6  -3.14051   TTATTTCCAGGAACA CCCG--CATCCCACCGAAGGCACGAT ACGCACG ACCGCGCCGCCGGTCGAATGGTCGGG CACGCCCGGCGGGTA  50 237
CXD81_RS02000  391770 ..  391780 -  -3.2  -2.78816   TCATCGGCCATGACA                 CATC GCT GACG                 GGGTTTGGCGGCGGG  40 151
CXD81_RS01985 NONE
CXD81_RS01980 NONE
CXD81_RS01975 NONE
CXD81_RS01970  387548 ..  387560 -  -3.3   -3.6968   CGAGAACCCCAAGAA                GCTGA AGT TCCGC                GAACTGGAAGCCGCC  55 436
        argB NONE
CXD81_RS01955 NONE
        slmA NONE
CXD81_RS01945 NONE
CXD81_RS01940 NONE
        gatC NONE
        gatA NONE
        gatB  372155 ..  372173 - -10.2  -2.62515   AATCGGTCGAGATCA             TCCGCGCC GCC GGCGCCGA             GCCCGCCGCGGTGCT  55 359
         xth  370494 ..  370505 -  -7.2  -4.25104   TTCGTCGGACGAAAA                GCCG GAAT CGGC                 CGCAAAACCAGTGCT  72 313
CXD81_RS01885  368710 ..  368739 -   -18  -3.93262   CCCAACAAATGGAAA       TGCCGCTGACCA TCGTGC TGGTCAGCGGCA        TGATCACCGGGTGCG 100 313
CXD81_RS01870  366051 ..  366094 - -11.6  -3.15544   GGTCAGGCGCATCAA GACCGGCG-CCGGCGCGCA TGCGTTC CGCGCGCAGGGCGACGGCC GCCATCTGTTCGTCA  64 284
CXD81_RS01830 NONE
CXD81_RS01825  356971 ..  356981 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CXD81_RS01820  355750 ..  355794 -    -4  -2.78463   AGTGGCGCGAGCAGA CGCTGTCCGAAGCGGGCGAC CTGGT GCTGGCCGCGCCGGATACCG GCCTGGACGCCAAAG  40 198
CXD81_RS01795  353456 ..  353490 -    -4   -4.9792   CATTTTAGATAAAAA     CCGCGCGCATGCAACC GGT GCCTGCCGGCGCGCCA     GCGCCGACGGCCCGC  79 115
CXD81_RS01790 NONE
CXD81_RS01785  351836 ..  351849 -  -2.3  -2.64616   TTCCCATCGAGAGCA               GGCAC GAGC GTGCT                TGTGCTGTCGATGAC  38 120
CXD81_RS01780 NONE
CXD81_RS01775 NONE
CXD81_RS01770  347164 ..  347216 - -16.2  -3.05844   TCGGCCAGCGGAATA TGCACCGCGCCGCTGGCGGCGG CGAGAATGC CCACCGCCAGCAGGGCAGCGCC CAGCGCCAGCAGCAG  79 60
CXD81_RS01765 NONE
CXD81_RS01760  345446 ..  345471 - -11.9  -3.57144   TGCGCCACCTCGAAA         CCGGCGC-CTGA GGT TCAGCGCGCCAG         CACCAGCAGGCGGCC  72 14
CXD81_RS01750 NONE
        alkB  343430 ..  343446 -  -9.3  -2.52464   TTGCGGCCGAATTCA              GGCGCCG GCG CGGCGCA              GCGTGAAGTTGATGC  54 6
CXD81_RS01740  342815 ..  342825 -  -8.2  -3.53012   TGCCGGCGTTGCAAA                 CGGC TCA GCCG                 GCCTCGCGCAACAGC  62 19
CXD81_RS01735  341244 ..  341261 - -12.7  -3.06915   AGGGACGCTACGCAA             GCCGGCT GGTC AGCCGGC              CCGAGCATCGCGACG  66 346
CXD81_RS01710 NONE
CXD81_RS01705  337109 ..  337123 -  -8.5  -2.56596   GTCGGGAGCAATCTA               CGCGG GTCGG CCGCG               CGCTGTCTGTTTACT  52 64
CXD81_RS01700 NONE
CXD81_RS01695 NONE
CXD81_RS01690 NONE
CXD81_RS01685 NONE
CXD81_RS01680  332180 ..  332214 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS01670 NONE
        lptG NONE
CXD81_RS01660  327980 ..  327992 -  -4.7  -3.01712   CGTTCGTGGCCAAGA                GCGAG ATC CGCGC                CTGGCCGGTCATCGG  46 510
CXD81_RS01625 NONE
CXD81_RS01620 NONE
CXD81_RS01615  321217 ..  321255 - -10.2  -5.80951   ATCCAAAACAAAAAA   GTGAAGCCCATCGGATCG TAA CAATCCGATGGGCCGGGC   CCTGCCCGTCGCGGC 100 45
CXD81_RS01610  318907 ..  318919 -  -2.7  -2.80074   GTTTTTACAAGAGGA                TCCAT GAC ATGAA                AATTCTGCAACCGCC  39 516
CXD81_RS01545 NONE
CXD81_RS01540  305075 ..  305091 -  -9.3   -2.7185   ATCATGGTGGAATTA              TGCGCCG GGC CGGCGCC              GGCGTGGCCGGCCTG  55 41
CXD81_RS01535  303866 ..  303900 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD81_RS01525  302711 ..  302726 - -11.8   -5.4505   TTGGCCAACAAAAAA              GCCGCC CGGA GGCGGC               TGGAAGGTCGGCTTC 100 42
CXD81_RS01520 NONE
CXD81_RS01515  300764 ..  300787 -  -3.1  -3.51934   CCTGGCTGAGAAACA          TCG-AGCCGA ACTTG CCGGCCCCGA          TCAACGCCACCCGCA  49 219
CXD81_RS01500 NONE
CXD81_RS01485  293178 ..  293208 -  -8.8  -2.66316   GCGGCGAGCAGATCA       CCGCCGTGGCGCTG GAC CTGGGCTACGGCAG       CCCGGGCGCCTTCAC  51 151
CXD81_RS01475 NONE
CXD81_RS01470 NONE
CXD81_RS01465 NONE
CXD81_RS01460  288026 ..  288036 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS01455  286671 ..  286699 -    -6  -3.08679   CCGCGTGATGGAAGA       CATCGTGCGCACGG GCG CCGTGCGG-CG-TG       GCTGGTTCGGCATCG  48 348
CXD81_RS01445  284944 ..  284970 -  -7.9  -3.23853   CCGCCGCAAGGAAGA        GGCCGCGCCGGA AGCG CCCGCCGC-GCC         GCCGGAAGATGTCAC  53 114
        petA NONE
CXD81_RS01430 NONE
CXD81_RS01425  281345 ..  281376 - -18.8  -3.94846   GTATGAAAAGCGAAA      GGCCAGCGCC-GCCA AAT TAGCAGGCGCTGGCC      CCGATTGCCAGGCGG 100 123
CXD81_RS01420 NONE
CXD81_RS01415  280173 ..  280197 - -17.2  -3.16191   CTACACCGGCATGAA          CGCAAGCGGC GCATG GCCGCTTGCG          AGGGACTGCATTGTA  84 73
CXD81_RS01410  280053 ..  280073 - -13.3  -5.07011   TACATAAACGAAAAA            GCCGTCTCC AGA GGAAACGGC            CTAGATCGTTGATTT 100 44
CXD81_RS01395 NONE
CXD81_RS01390  277803 ..  277842 -  -8.6  -3.02144   TCAGCGCCGCCAACA  CCATGCGCCTGG-ACAACA TGG TGCTGTACCAGACGCCCAG  CCTGGATGGTTTCAA  55 372
CXD81_RS01310 NONE
CXD81_RS01305  262641 ..  262691 - -13.4  -2.53876   TCCCAGCGGAATCCA GGGCATCGTGATCGG-GCCGCACGGC CTG GCCG-GCGGCGCCGATC-CG-CGCCG CGAAGGCCTGGCGCT  67 58
CXD81_RS01295  259920 ..  259935 - -11.8  -3.57144   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC  72 46
CXD81_RS01285  257763 ..  257785 - -12.7  -3.24747   GGGCGACATGACCAA          CGCGCGCCGC TAGA GCGGCGC-CG           GGCGCGTCAGTTGGG  71 32
CXD81_RS01275 NONE
CXD81_RS01270  254241 ..  254278 -    -9  -3.35679   CGCGGGCAGTGAGAA   GCGGGCGCCCGTCCCC GTTGGG GAGGAGCGACACCCGC    GGCAAGGGTGCCTGT  63 127
        mutL NONE
        miaA  250651 ..  250680 - -23.7  -2.78816   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 30
CXD81_RS01245 NONE
CXD81_RS01240 NONE
        pcnB NONE
CXD81_RS01230  245860 ..  245873 -  -4.5  -3.38326   CAGAAGCTGAACGAA               GCGTCG GCG CG-CGC               GCTGAACACGCCGGC  49 189
CXD81_RS01210  240287 ..  240318 - -15.9  -3.76413   TTGCAAAATGGGAAA      GGCATCCGGTGCG TGCGAG CGCACCGGACACC       ATTGGACGGCCTGCG  90 42
CXD81_RS01205  239306 ..  239316 -  -2.4  -3.29144   CGACCTGGCGCACAA                 GGAC CTG GGCC                 TGGCGCTCGAACTGG  44 257
CXD81_RS01185  236324 ..  236334 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS01180  235203 ..  235217 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
        thiC  229270 ..  229284 -  -8.5  -3.02263   ACACCTCGGTCAAGA               CCGCC TACAC GGCGG               CCTGACCCGCATGGC  55 72
CXD81_RS01135 NONE
CXD81_RS01130  224033 ..  224082 -  -9.8  -2.82015   GCCATAGGCAGCATA TCGGCGACGGCGGCGCC--GCGGA TTTT CCCGCTTGGCGCGGCCGACGCGGC GCCGGTAGGCATCGC  56 396
CXD81_RS01120  222471 ..  222483 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTACCCGGACTGCCG  50 368
CXD81_RS01110  218814 ..  218842 -  -2.3  -4.92756   ATGATCAAAAACAAA        TCATCCTGGGACG CAG CGCCTCAAAATGT        TGGGAGGCTTCCGGG  76 237
CXD81_RS01105  215550 ..  215579 - -23.7  -2.78816   TCATGGCGCATGACA       GAGCGCCTGTCCC CGTG GGGACAGGCGCTC        TTGCCGCTGGTGTCG 100 111
CXD81_RS01100 NONE
CXD81_RS01095  212802 ..  212815 -  -3.7  -3.33696   GGGCTCCGTAAGGAA               GGCGC GGCG GCGTC                AGTGGGTCAGGTAAC  47 24
CXD81_RS01090  211988 ..  212021 - -12.4  -2.82519   CGAGCACATCAACCA    GGCGCTGCGGCGCCGC TGAG GCGGCGC-GC-GCGCG     ATGCGCGAGCAGGCG  66 61
CXD81_RS01080 NONE
CXD81_RS01075  209663 ..  209683 - -19.7  -4.11216   CTTCGATCGGTAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGGCGTTCAG 100 37
        catC NONE
CXD81_RS01065 NONE
        pcaD NONE
CXD81_RS01055  206873 ..  206885 -  -4.7  -3.73068   GGCCGAATGCAACAA                GTCGG CAA CCGGC                AAGACCGGCGACGAG  58 310
CXD81_RS01025  201801 ..  201811 -  -8.2  -3.28712   GGCGCGGGTGGACAA                 CGCC TAT GGCG                 ACCGCAACCTGGTGT  59 217
CXD81_RS00975 NONE
CXD81_RS00970 NONE
CXD81_RS00965  188273 ..  188285 -  -4.8  -3.41051   GCAGTTCGACGAGAA                GTCG TTCGT CGAC                TTCAAGGGCGATGTC  52 372
CXD81_RS00940  180908 ..  180937 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGT GCCACGGCGGCGCT       GCAGGGGCCGGCGGG  91 50
CXD81_RS00935  178599 ..  178625 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GTG GCGGGCCGGCGG         CGGCGCGCTCAGCGC 100 34
         bfr  173559 ..  173580 - -17.3  -3.75629   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG  91 63
CXD81_RS00875 NONE
CXD81_RS00870  166927 ..  166982 -  -6.7  -3.15544   CGCTATCCGCACGAA TTCTCCGGCGGCCAGCGCCAGCGC-AT CTGC ATCGCGCGCGCGCTGGCCACCCG-GCC GCGCTTCCTGATCTG  52 330
CXD81_RS00860  164534 ..  164591 -  -2.7  -4.11484   CTGAACTCTTCAAAA CCATGGAAGCGGTGCGCTGGAATAT-GG CGT CCGATATCCCATGGGACGACTTCGACGG CAGCAAGCTGTCGGA  59 327
        phoB NONE
        phoR NONE
CXD81_RS00820 NONE
CXD81_RS00815  155622 ..  155649 -  -2.7  -2.66316   CGGCCGACGATAGCA       GGGCG--GGACTG ACCT CAGTCTGTCGCCC        GGATTACGCGTTTGT  39 12
CXD81_RS00810  154986 ..  154998 -  -7.7  -3.78934   TTGCCTGTACAACAA                GGGTT GAA AACCC                CCCCCCCATTGTGGA  66 96
CXD81_RS00805  153494 ..  153509 -  -3.2  -3.73775   TCGAGCTCGACGAAA              TCGACG CCAT CGCCAA               CCTGGTGCGCCACGG  55 281
CXD81_RS00795 NONE
        pxpB NONE
CXD81_RS00785  150084 ..  150106 -    -9  -3.01712   TCCGGTCGGCGAAGA           CTTCCTGCGC CGC GCGCAGGCCG           ATGGCGCGGGCAGCG  57 495
CXD81_RS00770  147840 ..  147852 -  -5.5  -3.01712   GCGGCGCCGCCAATA                CCGCA TCC TGCGA                TGATGACTCGCATAG  47 110
CXD81_RS00760 NONE
CXD81_RS00755 NONE
CXD81_RS00750  143526 ..  143567 -  -9.2  -3.72027   AGCGCCTACGAACAA TGGGCGGGCGACGC-CGGC GACGA GCCGGGCGACGACCGCCTG CGCGTCGCGTAGGCC  68 125
        ilvA  136162 ..  136172 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 380
CXD81_RS00720 NONE
CXD81_RS00710  132734 ..  132774 -  -8.8  -3.05715   AATGCCGTTACCGAA CGCCAAGTCCGCGCCTGCG TGGA CGCGGGCGCGG-CTACGCT  GGGCGATCTCCAGTT  55 264
CXD81_RS00695  130456 ..  130475 - -16.4  -3.85165   CAGCGCAAATGTAAA            CGGCGCGC CAGG GCGCGCCG             TCAGGCCGGTCCGGG  91 55
        leuA  128020 ..  128048 - -16.7   -3.1372   GACCGCCGAGCAATA        CCTGGCCCACCTG GCG CAGGCGGGGCAGG        CGCGCGCGAAAGTGG  80 355
CXD81_RS00675 NONE
CXD81_RS00670  124695 ..  124739 - -17.8  -3.19653   CCAGAAGGCCAGGAA CAGCGCCGCGGCCGGC-GCAG CGAA CAACAGCCATCCGCGGCGCTG CATATCAATTCACCT  86 30
CXD81_RS00660 NONE
CXD81_RS00655  122127 ..  122137 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD81_RS00650  121049 ..  121077 -  -2.9  -3.30701   TTCCAGGAAATTCAA        TGGGCCGCCAGCA CCA CGCTGACGGACTG        GCCGGTCTGATAGGT  46 71
CXD81_RS00645  120173 ..  120194 - -10.8  -2.84325   GCGGTGCAAACATGA           CGCCGCCA TGTCAG CGGCGGCG            CTTGTTTCACTCGTC  61 32
CXD81_RS00640  119063 ..  119077 - -12.8  -3.48276   CGGTGGTTCACAGAA               CCGCCG CGT CGGCGG               CGAAGAAATGCTGTC  73 3
CXD81_RS00635 NONE
CXD81_RS00630 NONE
CXD81_RS00625  115862 ..  115880 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 182
CXD81_RS00605 NONE
CXD81_RS00600  111212 ..  111226 -    -7  -2.90714   TTAAAGCGTTACAGA               CTGCGG ATG CCGCGG               GGAAGTTCCATGGCG  50 43
CXD81_RS00595  110499 ..  110518 - -11.4  -4.08144   CCCATCAACGACAAA            GCCTCCGC ATGG ACGGAGGC             TTTGTGGCGTCGGGG  82 60
CXD81_RS00580 NONE
        rfbB NONE
        rfbD NONE
        rfbC  104821 ..  104856 - -16.1  -3.14878   GGCGTCAACTGAAGA    CGCGCGGGCCGCTAC GCATAG GTATCGGCCCGCGCC     AGCGCCACGCCCTGG  81 1
CXD81_RS00510 NONE
CXD81_RS00505 NONE
CXD81_RS00500   94077 ..   94110 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATT GCGGCGGGGGCGGCG      CTGCGTGCGCCCGAC  52 204
CXD81_RS00485 NONE
CXD81_RS00480 NONE
CXD81_RS00475 NONE
CXD81_RS00470 NONE
CXD81_RS00465   86735 ..   86750 -  -7.5  -2.62515   AATTCTCGCAGATTA              GCGCG AGGCTG CGCGC               CGTGGCGTGACAGAT  50 7
CXD81_RS00460 NONE
CXD81_RS00455   84787 ..   84810 -  -9.4  -3.53012   GCGTTGGTGCGCAAA          GGCGCGACAC TGCC GGGGCGCGCC           ATTGAGTGCGAGTCA  64 107
CXD81_RS00450 NONE
CXD81_RS00445   82754 ..   82775 -  -7.9  -4.62302   GAAGAGCCGGAAAAA           CCCAGTGCG ACGG CGCACAAGG            CCAGTGGCGTGGATA  81 73
CXD81_RS00435   79481 ..   79495 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 131
CXD81_RS00425   77326 ..   77352 -  -8.7  -4.07568   CTCGCTGCTGGAAAA         GCTGCCCGC GCAGCTCCA GCAGGCAGC         CGGCCAGCTGCAGGG  72 308
CXD81_RS00415 NONE
CXD81_RS00410 NONE
        ampD NONE
CXD81_RS00400   73382 ..   73413 - -10.1  -3.25823   GGTGCTGGAGATCAA      CCCGGACCACGCGC TGGTC GCGCG-GATCCGCG      ATGCCAGCGATGCGG  63 318
CXD81_RS00390   71199 ..   71221 - -12.6  -2.82742   ACGCTTTTATAACGA           CCGGCGCCCG CAT CAGGCGCTGG           GCATGAAGACTCCGG  66 195
CXD81_RS00365   66991 ..   67001 -  -8.2  -2.54655   AAAAGGCCCAACCCA                 GGGG TAC CCCC                 AAATTGATGATCCAT  52 507
CXD81_RS00355 NONE
CXD81_RS00350   64500 ..   64513 -  -5.3   -3.5323   AACTTCAAACAAAAC               TATCG CACT CGATA                TCAAGCGCATCGATC  54 1
CXD81_RS00345 NONE
CXD81_RS00340   63284 ..   63310 -  -4.3  -2.78384   GCGCGGCCCATGATA        TCCGTGCCC-CC ACCG GGTGGGAACGGT         ACGACCAGTGTAATA  43 189
CXD81_RS00335   62061 ..   62083 -  -8.4  -4.09685   GGTGATGGCGTAAAA           GGGCATAGCG ATC CGCTATATCC           AGCCTGGCAAGCCAA  72 385
CXD81_RS00325   60987 ..   60998 -    -3  -5.30348   ACTTAACAATAAAAA                TTCA AATA TGAA                 TGTTTAATTTAGTTA  89 105
CXD81_RS00320 NONE
CXD81_RS00315   58900 ..   58930 -  -5.3  -3.73068   GGTCGAAGCCAACAA       CCCCACCACCAGC ATCCA GCTGGTCGTGGCC       GGCATAGGGCTGGGT  57 344
CXD81_RS00305 NONE
CXD81_RS00300 NONE
CXD81_RS00295 NONE
CXD81_RS00290 NONE
CXD81_RS00285 NONE
CXD81_RS00280   53379 ..   53401 -  -4.8  -3.76482   CGACACCAGCAAGAA           CCTGGTCG AGGAAGG CGACAAGG           GCAAGCGCTACGCGC  58 247
CXD81_RS00235   45237 ..   45272 -  -2.4  -4.16842   TTCATGCTCAAGAAA    CGCGTGCGGATCCTG TGGCAGG CCGGCTGCGC-CGCG    CTGCTGCTGGCCGCC  61 474
CXD81_RS00215   43266 ..   43306 - -20.6  -3.53012   GTCTTGGCCGTCAAA CCG-CAGTGTGCCTGTCCC AGCG GGGACAGGCACACTGGCCG  CAGTTGGGACAGGCA 100 66
CXD81_RS00175   35576 ..   35594 - -13.1  -2.84298   GACAGTTCACAACTA             GCGCGGC GCCTG GCCGCGC             GGCAGCCAGTGCCAG  69 4
CXD81_RS00155   30988 ..   31001 -  -3.7  -2.70932   TCTCGCCGCGAATCA               TCGCC TGGC GGCGG                ATCCGGCCAGCATGG  41 94
CXD81_RS00150 NONE
CXD81_RS00145 NONE
CXD81_RS00140 NONE
CXD81_RS00135   28287 ..   28297 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD81_RS00130   26859 ..   26875 -  -5.8  -3.53012   TGCGCTGCCTGCAAA             GC-GGCG CGGA CGCCTGC              GTGCCCCTGCCGGCC  55 433
CXD81_RS00115   24044 ..   24068 -  -7.7  -2.97021   TCGGCAAAGATGATA          TCCAGGCCCAC TGC GCGGGCCTCGC          CCAGCTTGTCCAGCA  53 310
CXD81_RS00100   20076 ..   20099 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 53
