locus-tag class description CYG28_RS00005 PF13932 GidA associated domain CYG28_RS00005 PF01134 Glucose inhibited division protein A CYG28_RS00010 PF02527 rRNA small subunit methyltransferase G CYG28_RS00015 PF13614 AAA domain CYG28_RS00025 PF17762 HTH domain found in ParB protein CYG28_RS00025 PF02195 ParB-like nuclease domain CYG28_RS00050 PF03143 Elongation factor Tu C-terminal domain CYG28_RS00050 PF03144 Elongation factor Tu domain 2 CYG28_RS00050 PF00009 Elongation factor Tu GTP binding domain CYG28_RS00060 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CYG28_RS00065 PF02357 Transcription termination factor nusG CYG28_RS00065 PF00467 KOW motif CYG28_RS00070 PF00298 Ribosomal protein L11, RNA binding domain CYG28_RS00070 PF03946 Ribosomal protein L11, N-terminal domain CYG28_RS00075 PF00687 Ribosomal protein L1p/L10e family CYG28_RS00080 PF00466 Ribosomal protein L10 CYG28_RS00085 PF16320 Ribosomal protein L7/L12 dimerisation domain CYG28_RS00085 PF00542 Ribosomal protein L7/L12 C-terminal domain CYG28_RS00090 PF00562 RNA polymerase Rpb2, domain 6 CYG28_RS00090 PF04560 RNA polymerase Rpb2, domain 7 CYG28_RS00090 PF04565 RNA polymerase Rpb2, domain 3 CYG28_RS00090 PF04561 RNA polymerase Rpb2, domain 2 CYG28_RS00090 PF10385 RNA polymerase beta subunit external 1 domain CYG28_RS00090 PF04563 RNA polymerase beta subunit CYG28_RS00095 PF04983 RNA polymerase Rpb1, domain 3 CYG28_RS00095 PF05000 RNA polymerase Rpb1, domain 4 CYG28_RS00095 PF00623 RNA polymerase Rpb1, domain 2 CYG28_RS00095 PF04998 RNA polymerase Rpb1, domain 5 CYG28_RS00095 PF04997 RNA polymerase Rpb1, domain 1 CYG28_RS00125 PF00072 Response regulator receiver domain CYG28_RS00125 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS00135 PF02515 CoA-transferase family III CYG28_RS00150 PF01575 MaoC like domain CYG28_RS00155 PF03466 LysR substrate binding domain CYG28_RS00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS00160 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS00180 PF02091 Glycyl-tRNA synthetase alpha subunit CYG28_RS00185 PF02092 Glycyl-tRNA synthetase beta subunit CYG28_RS00185 PF05746 DALR anticodon binding domain CYG28_RS00195 PF01553 Acyltransferase CYG28_RS00205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG28_RS00210 PF01327 Polypeptide deformylase CYG28_RS00250 PF00561 alpha/beta hydrolase fold CYG28_RS00255 PF00561 alpha/beta hydrolase fold CYG28_RS00255 PF07021 Methionine biosynthesis protein MetW CYG28_RS00270 PF07690 Major Facilitator Superfamily CYG28_RS00280 PF01177 Asp/Glu/Hydantoin racemase CYG28_RS00285 PF00005 ABC transporter CYG28_RS00290 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS00300 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS00335 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS00350 PF00175 Oxidoreductase NAD-binding domain CYG28_RS00350 PF00970 Oxidoreductase FAD-binding domain CYG28_RS00350 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG28_RS00355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS00365 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS00395 PF00183 Hsp90 protein CYG28_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS00400 PF00043 Glutathione S-transferase, C-terminal domain CYG28_RS00400 PF13417 Glutathione S-transferase, N-terminal domain CYG28_RS00405 PF01510 N-acetylmuramoyl-L-alanine amidase CYG28_RS00415 PF01578 Cytochrome C assembly protein CYG28_RS00420 PF00448 SRP54-type protein, GTPase domain CYG28_RS00420 PF02881 SRP54-type protein, helical bundle domain CYG28_RS00420 PF02978 Signal peptide binding domain CYG28_RS00435 PF02719 Polysaccharide biosynthesis protein CYG28_RS00445 PF10997 Alternate to MurJ CYG28_RS00450 PF00534 Glycosyl transferases group 1 CYG28_RS00450 PF00862 Sucrose synthase CYG28_RS00455 PF02397 Bacterial sugar transferase CYG28_RS00460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYG28_RS00470 PF02350 UDP-N-acetylglucosamine 2-epimerase CYG28_RS00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYG28_RS00480 PF00132 Bacterial transferase hexapeptide (six repeats) CYG28_RS00485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG28_RS00485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG28_RS00490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYG28_RS00495 PF00534 Glycosyl transferases group 1 CYG28_RS00495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CYG28_RS00505 PF03309 Type III pantothenate kinase CYG28_RS00515 PF02405 Permease MlaE CYG28_RS00520 PF00005 ABC transporter CYG28_RS00540 PF00768 D-alanyl-D-alanine carboxypeptidase CYG28_RS00540 PF07943 Penicillin-binding protein 5, C-terminal domain CYG28_RS00545 PF01063 Amino-transferase class IV CYG28_RS00550 PF04359 Protein of unknown function (DUF493) CYG28_RS00555 PF03099 Biotin/lipoate A/B protein ligase family CYG28_RS00560 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CYG28_RS00560 PF04055 Radical SAM superfamily CYG28_RS00565 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CYG28_RS00570 PF04321 RmlD substrate binding domain CYG28_RS00575 PF16363 GDP-mannose 4,6 dehydratase CYG28_RS00590 PF01053 Cys/Met metabolism PLP-dependent enzyme CYG28_RS00595 PF01323 DSBA-like thioredoxin domain CYG28_RS00595 PF00085 Thioredoxin CYG28_RS00605 PF05746 DALR anticodon binding domain CYG28_RS00605 PF00750 tRNA synthetases class I (R) CYG28_RS00605 PF03485 Arginyl tRNA synthetase N terminal domain CYG28_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS00635 PF13416 Bacterial extracellular solute-binding protein CYG28_RS00640 PF17912 MalK OB fold domain CYG28_RS00640 PF00005 ABC transporter CYG28_RS00645 PF00149 Calcineurin-like phosphoesterase CYG28_RS00655 PF12857 TOBE-like domain CYG28_RS00655 PF00005 ABC transporter CYG28_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS00675 PF00356 Bacterial regulatory proteins, lacI family CYG28_RS00685 PF01425 Amidase CYG28_RS00690 PF00682 HMGL-like CYG28_RS00690 PF08502 LeuA allosteric (dimerisation) domain CYG28_RS00700 PF04552 Sigma-54, DNA binding domain CYG28_RS00700 PF04963 Sigma-54 factor, core binding domain CYG28_RS00700 PF00309 Sigma-54 factor, Activator interacting domain (AID) CYG28_RS00710 PF03466 LysR substrate binding domain CYG28_RS00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS00730 PF00291 Pyridoxal-phosphate dependent enzyme CYG28_RS00730 PF00585 C-terminal regulatory domain of Threonine dehydratase CYG28_RS00745 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS00745 PF07729 FCD domain CYG28_RS00750 PF02515 CoA-transferase family III CYG28_RS00760 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS00770 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS00785 PF02626 Carboxyltransferase domain, subdomain A and B CYG28_RS00790 PF02682 Carboxyltransferase domain, subdomain C and D CYG28_RS00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS00800 PF03466 LysR substrate binding domain CYG28_RS00805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG28_RS00805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG28_RS00805 PF01842 ACT domain CYG28_RS00815 PF00672 HAMP domain CYG28_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS00815 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS00820 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS00820 PF00072 Response regulator receiver domain CYG28_RS00825 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS00825 PF11808 Phosphate regulon sensor protein PhoR CYG28_RS00825 PF00989 PAS fold CYG28_RS00830 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS00830 PF00072 Response regulator receiver domain CYG28_RS00835 PF01209 ubiE/COQ5 methyltransferase family CYG28_RS00850 PF03109 ABC1 family CYG28_RS00870 PF04536 TPM domain CYG28_RS00880 PF00271 Helicase conserved C-terminal domain CYG28_RS00880 PF00270 DEAD/DEAH box helicase CYG28_RS00885 PF01810 LysE type translocator CYG28_RS00890 PF03144 Elongation factor Tu domain 2 CYG28_RS00890 PF00009 Elongation factor Tu GTP binding domain CYG28_RS00890 PF16658 Class II release factor RF3, C-terminal domain CYG28_RS00900 PF00210 Ferritin-like domain CYG28_RS00930 PF00581 Rhodanese-like domain CYG28_RS00930 PF17773 UPF0176 acylphosphatase like domain CYG28_RS00935 PF09334 tRNA synthetases class I (M) CYG28_RS00935 PF01588 Putative tRNA binding domain CYG28_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase CYG28_RS00960 PF00692 dUTPase CYG28_RS00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CYG28_RS00985 PF01276 Orn/Lys/Arg decarboxylase, major domain CYG28_RS00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYG28_RS01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYG28_RS01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYG28_RS01005 PF02535 ZIP Zinc transporter CYG28_RS01010 PF01571 Aminomethyltransferase folate-binding domain CYG28_RS01010 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYG28_RS01015 PF01597 Glycine cleavage H-protein CYG28_RS01020 PF02347 Glycine cleavage system P-protein CYG28_RS01025 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS01025 PF07729 FCD domain CYG28_RS01030 PF02515 CoA-transferase family III CYG28_RS01060 PF12146 Serine aminopeptidase, S33 CYG28_RS01070 PF02426 Muconolactone delta-isomerase CYG28_RS01075 PF01144 Coenzyme A transferase CYG28_RS01080 PF01144 Coenzyme A transferase CYG28_RS01085 PF09339 IclR helix-turn-helix domain CYG28_RS01085 PF01614 Bacterial transcriptional regulator CYG28_RS01095 PF02667 Short chain fatty acid transporter CYG28_RS01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG28_RS01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG28_RS01105 PF03797 Autotransporter beta-domain CYG28_RS01105 PF00082 Subtilase family CYG28_RS01110 PF00311 Phosphoenolpyruvate carboxylase CYG28_RS01115 PF06508 Queuosine biosynthesis protein QueC CYG28_RS01145 PF02913 FAD linked oxidases, C-terminal domain CYG28_RS01145 PF01565 FAD binding domain CYG28_RS01150 PF00171 Aldehyde dehydrogenase family CYG28_RS01155 PF13667 ThiC-associated domain CYG28_RS01155 PF01964 Radical SAM ThiC family CYG28_RS01160 PF07549 SecD/SecF GG Motif CYG28_RS01160 PF02355 Protein export membrane protein CYG28_RS01165 PF09518 HindIII restriction endonuclease CYG28_RS01195 PF02627 Carboxymuconolactone decarboxylase family CYG28_RS01205 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS01205 PF07702 UTRA domain CYG28_RS01210 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS01215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS01225 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS01230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CYG28_RS01235 PF01743 Poly A polymerase head domain CYG28_RS01235 PF12626 Polymerase A arginine-rich C-terminus CYG28_RS01235 PF12627 Probable RNA and SrmB- binding site of polymerase A CYG28_RS01245 PF00308 Bacterial dnaA protein CYG28_RS01250 PF02769 AIR synthase related protein, C-terminal domain CYG28_RS01250 PF00586 AIR synthase related protein, N-terminal domain CYG28_RS01260 PF01119 DNA mismatch repair protein, C-terminal domain CYG28_RS01260 PF08676 MutL C terminal dimerisation domain CYG28_RS01265 PF09335 SNARE associated Golgi protein CYG28_RS01270 PF01520 N-acetylmuramoyl-L-alanine amidase CYG28_RS01270 PF11741 AMIN domain CYG28_RS01275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CYG28_RS01280 PF00206 Lyase CYG28_RS01280 PF10415 Fumarase C C-terminus CYG28_RS01290 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS01295 PF03466 LysR substrate binding domain CYG28_RS01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS01305 PF02515 CoA-transferase family III CYG28_RS01310 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS01345 PF01654 Cytochrome bd terminal oxidase subunit I CYG28_RS01350 PF02322 Cytochrome bd terminal oxidase subunit II CYG28_RS01355 PF08173 Membrane bound YbgT-like protein CYG28_RS01360 PF00664 ABC transporter transmembrane region CYG28_RS01360 PF00005 ABC transporter CYG28_RS01365 PF00005 ABC transporter CYG28_RS01365 PF00664 ABC transporter transmembrane region CYG28_RS01370 PF00156 Phosphoribosyl transferase domain CYG28_RS01415 PF04386 Stringent starvation protein B CYG28_RS01420 PF02798 Glutathione S-transferase, N-terminal domain CYG28_RS01420 PF00043 Glutathione S-transferase, C-terminal domain CYG28_RS01425 PF02167 Cytochrome C1 family CYG28_RS01430 PF00033 Cytochrome b/b6/petB CYG28_RS01430 PF00032 Cytochrome b(C-terminal)/b6/petD CYG28_RS01435 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CYG28_RS01435 PF00355 Rieske [2Fe-2S] domain CYG28_RS01440 PF01741 Large-conductance mechanosensitive channel, MscL CYG28_RS01445 PF01784 NIF3 (NGG1p interacting factor 3) CYG28_RS01450 PF13180 PDZ domain CYG28_RS01460 PF04299 Putative FMN-binding domain CYG28_RS01465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG28_RS01470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS01475 PF07859 alpha/beta hydrolase fold CYG28_RS01485 PF00682 HMGL-like CYG28_RS01485 PF08502 LeuA allosteric (dimerisation) domain CYG28_RS01490 PF12833 Helix-turn-helix domain CYG28_RS01495 PF00920 Dehydratase family CYG28_RS01500 PF07690 Major Facilitator Superfamily CYG28_RS01505 PF03466 LysR substrate binding domain CYG28_RS01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS01515 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CYG28_RS01545 PF07859 alpha/beta hydrolase fold CYG28_RS01555 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS01560 PF11862 Domain of unknown function (DUF3382) CYG28_RS01560 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS01565 PF00005 ABC transporter CYG28_RS01565 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS01570 PF00005 ABC transporter CYG28_RS01585 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS01590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS01590 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS01590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS01595 PF00501 AMP-binding enzyme CYG28_RS01595 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS01615 PF00202 Aminotransferase class-III CYG28_RS01620 PF02581 Thiamine monophosphate synthase CYG28_RS01625 PF08543 Phosphomethylpyrimidine kinase CYG28_RS01630 PF00301 Rubredoxin CYG28_RS01635 PF02622 Uncharacterized ACR, COG1678 CYG28_RS01640 PF03652 Holliday junction resolvase CYG28_RS01645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYG28_RS01645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYG28_RS01650 PF01979 Amidohydrolase family CYG28_RS01655 PF01553 Acyltransferase CYG28_RS01660 PF00149 Calcineurin-like phosphoesterase CYG28_RS01670 PF00912 Transglycosylase CYG28_RS01685 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS01685 PF00501 AMP-binding enzyme CYG28_RS01690 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS01705 PF12706 Beta-lactamase superfamily domain CYG28_RS01710 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS01725 PF11737 Protein of unknown function (DUF3300) CYG28_RS01735 PF00990 Diguanylate cyclase, GGDEF domain CYG28_RS01735 PF03707 Bacterial signalling protein N terminal repeat CYG28_RS01735 PF00563 EAL domain CYG28_RS01740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CYG28_RS01740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYG28_RS01745 PF13532 2OG-Fe(II) oxygenase superfamily CYG28_RS01750 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CYG28_RS01755 PF04463 Protein of unknown function (DUF523) CYG28_RS01760 PF00005 ABC transporter CYG28_RS01765 PF01032 FecCD transport family CYG28_RS01770 PF01497 Periplasmic binding protein CYG28_RS01775 PF05171 Haemin-degrading HemS.ChuX domain CYG28_RS01780 PF00593 TonB dependent receptor CYG28_RS01780 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS01780 PF04886 PT repeat CYG28_RS01785 PF16220 Domain of unknown function (DUF4880) CYG28_RS01785 PF04773 FecR protein CYG28_RS01790 PF04542 Sigma-70 region 2 CYG28_RS01790 PF08281 Sigma-70, region 4 CYG28_RS01815 PF02423 Ornithine cyclodeaminase/mu-crystallin family CYG28_RS01825 PF07729 FCD domain CYG28_RS01825 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS01845 PF00171 Aldehyde dehydrogenase family CYG28_RS01855 PF00970 Oxidoreductase FAD-binding domain CYG28_RS01855 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG28_RS01855 PF00175 Oxidoreductase NAD-binding domain CYG28_RS01880 PF03458 UPF0126 domain CYG28_RS01885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYG28_RS01885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYG28_RS01890 PF03372 Endonuclease/Exonuclease/phosphatase family CYG28_RS01895 PF00156 Phosphoribosyl transferase domain CYG28_RS01900 PF02934 GatB/GatE catalytic domain CYG28_RS01900 PF02637 GatB domain CYG28_RS01905 PF01425 Amidase CYG28_RS01910 PF02686 Glu-tRNAGln amidotransferase C subunit CYG28_RS01920 PF04085 rod shape-determining protein MreC CYG28_RS01930 PF03717 Penicillin-binding Protein dimerisation domain CYG28_RS01930 PF00905 Penicillin binding protein transpeptidase domain CYG28_RS01935 PF01098 Cell cycle protein CYG28_RS01940 PF02615 Malate/L-lactate dehydrogenase CYG28_RS01945 PF00939 Sodium:sulfate symporter transmembrane region CYG28_RS01950 PF00440 Bacterial regulatory proteins, tetR family CYG28_RS01960 PF00696 Amino acid kinase family CYG28_RS01965 PF03180 NLPA lipoprotein CYG28_RS01970 PF00578 AhpC/TSA family CYG28_RS01975 PF04972 BON domain CYG28_RS01980 PF13580 SIS domain CYG28_RS01985 PF02021 Uncharacterised protein family UPF0102 CYG28_RS01990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG28_RS01995 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CYG28_RS01995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYG28_RS02015 PF02515 CoA-transferase family III CYG28_RS02020 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02025 PF02515 CoA-transferase family III CYG28_RS02040 PF09339 IclR helix-turn-helix domain CYG28_RS02045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS02055 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02060 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS02060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG28_RS02060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG28_RS02065 PF02515 CoA-transferase family III CYG28_RS02070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS02070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS02070 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS02075 PF03466 LysR substrate binding domain CYG28_RS02085 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02095 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02110 PF00892 EamA-like transporter family CYG28_RS02115 PF01810 LysE type translocator CYG28_RS02120 PF12146 Serine aminopeptidase, S33 CYG28_RS02140 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CYG28_RS02145 PF00535 Glycosyl transferase family 2 CYG28_RS02160 PF03616 Sodium/glutamate symporter CYG28_RS02170 PF02667 Short chain fatty acid transporter CYG28_RS02185 PF00929 Exonuclease CYG28_RS02215 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS02220 PF03466 LysR substrate binding domain CYG28_RS02225 PF09330 D-lactate dehydrogenase, membrane binding CYG28_RS02225 PF01565 FAD binding domain CYG28_RS02230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS02230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS02230 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS02235 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS02235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS02235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS02240 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02245 PF07687 Peptidase dimerisation domain CYG28_RS02245 PF01546 Peptidase family M20/M25/M40 CYG28_RS02255 PF01042 Endoribonuclease L-PSP CYG28_RS02265 PF00107 Zinc-binding dehydrogenase CYG28_RS02265 PF08240 Alcohol dehydrogenase GroES-like domain CYG28_RS02270 PF03466 LysR substrate binding domain CYG28_RS02270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS02275 PF13607 Succinyl-CoA ligase like flavodoxin domain CYG28_RS02275 PF13380 CoA binding domain CYG28_RS02280 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS02290 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02295 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CYG28_RS02300 PF01380 SIS domain CYG28_RS02305 PF01037 Lrp/AsnC ligand binding domain CYG28_RS02310 PF02803 Thiolase, C-terminal domain CYG28_RS02310 PF00108 Thiolase, N-terminal domain CYG28_RS02315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG28_RS02315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG28_RS02315 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS02320 PF12806 Acetyl-CoA dehydrogenase C-terminal like CYG28_RS02320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS02320 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS02320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS02325 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02330 PF00583 Acetyltransferase (GNAT) family CYG28_RS02330 PF13380 CoA binding domain CYG28_RS02330 PF13607 Succinyl-CoA ligase like flavodoxin domain CYG28_RS02345 PF01568 Molydopterin dinucleotide binding domain CYG28_RS02345 PF00384 Molybdopterin oxidoreductase CYG28_RS02365 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CYG28_RS02365 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CYG28_RS02365 PF01488 Shikimate / quinate 5-dehydrogenase CYG28_RS02370 PF03462 PCRF domain CYG28_RS02370 PF00472 RF-1 domain CYG28_RS02375 PF05175 Methyltransferase small domain CYG28_RS02375 PF17827 PrmC N-terminal domain CYG28_RS02380 PF00462 Glutaredoxin CYG28_RS02385 PF02441 Flavoprotein CYG28_RS02390 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02395 PF09084 NMT1/THI5 like CYG28_RS02400 PF00941 FAD binding domain in molybdopterin dehydrogenase CYG28_RS02400 PF03450 CO dehydrogenase flavoprotein C-terminal domain CYG28_RS02405 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CYG28_RS02405 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG28_RS02425 PF05036 Sporulation related domain CYG28_RS02425 PF03330 Lytic transglycolase CYG28_RS02430 PF03668 P-loop ATPase protein family CYG28_RS02440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG28_RS02440 PF00034 Cytochrome c CYG28_RS02440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYG28_RS02445 PF07475 HPr Serine kinase C-terminal domain CYG28_RS02445 PF02603 HPr Serine kinase N terminus CYG28_RS02450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG28_RS02460 PF00005 ABC transporter CYG28_RS02480 PF01380 SIS domain CYG28_RS02480 PF00571 CBS domain CYG28_RS02485 PF02222 ATP-grasp domain CYG28_RS02485 PF01370 NAD dependent epimerase/dehydratase family CYG28_RS02520 PF02938 GAD domain CYG28_RS02520 PF01336 OB-fold nucleic acid binding domain CYG28_RS02520 PF00152 tRNA synthetases class II (D, K and N) CYG28_RS02525 PF03372 Endonuclease/Exonuclease/phosphatase family CYG28_RS02530 PF13091 PLD-like domain CYG28_RS02555 PF13458 Periplasmic binding protein CYG28_RS02560 PF01425 Amidase CYG28_RS02565 PF05995 Cysteine dioxygenase type I CYG28_RS02570 PF09339 IclR helix-turn-helix domain CYG28_RS02570 PF01614 Bacterial transcriptional regulator CYG28_RS02580 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS02580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG28_RS02580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG28_RS02585 PF05275 Copper resistance protein B precursor (CopB) CYG28_RS02590 PF07732 Multicopper oxidase CYG28_RS02590 PF00394 Multicopper oxidase CYG28_RS02590 PF07731 Multicopper oxidase CYG28_RS02630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS02630 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS02630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS02645 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS02650 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS02655 PF01256 Carbohydrate kinase CYG28_RS02675 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS02680 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG28_RS02680 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS02685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS02685 PF00005 ABC transporter CYG28_RS02695 PF01546 Peptidase family M20/M25/M40 CYG28_RS02695 PF07687 Peptidase dimerisation domain CYG28_RS02705 PF00580 UvrD/REP helicase N-terminal domain CYG28_RS02705 PF13361 UvrD-like helicase C-terminal domain CYG28_RS02710 PF18074 Primosomal protein N C-terminal domain CYG28_RS02710 PF17764 3′ DNA-binding domain (3′BD) CYG28_RS02710 PF00270 DEAD/DEAH box helicase CYG28_RS02710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CYG28_RS02710 PF00271 Helicase conserved C-terminal domain CYG28_RS02715 PF01208 Uroporphyrinogen decarboxylase (URO-D) CYG28_RS02725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CYG28_RS02730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG28_RS02730 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYG28_RS02735 PF00231 ATP synthase CYG28_RS02740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG28_RS02740 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYG28_RS02740 PF00306 ATP synthase alpha/beta chain, C terminal domain CYG28_RS02745 PF00213 ATP synthase delta (OSCP) subunit CYG28_RS02750 PF00430 ATP synthase B/B' CF(0) CYG28_RS02755 PF00137 ATP synthase subunit C CYG28_RS02760 PF00119 ATP synthase A chain CYG28_RS02785 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS02790 PF13180 PDZ domain CYG28_RS02790 PF17820 PDZ domain CYG28_RS02795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS02795 PF13192 Thioredoxin domain CYG28_RS02805 PF01171 PP-loop family CYG28_RS02815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG28_RS02815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG28_RS02815 PF01842 ACT domain CYG28_RS02820 PF13098 Thioredoxin-like domain CYG28_RS02820 PF10411 Disulfide bond isomerase protein N-terminus CYG28_RS02825 PF01494 FAD binding domain CYG28_RS02830 PF03562 MltA specific insert domain CYG28_RS02830 PF06725 3D domain CYG28_RS02835 PF04379 ApaG domain CYG28_RS02840 PF00834 Ribulose-phosphate 3 epimerase family CYG28_RS02845 PF13419 Haloacid dehalogenase-like hydrolase CYG28_RS02850 PF00425 chorismate binding enzyme CYG28_RS02850 PF04715 Anthranilate synthase component I, N terminal region CYG28_RS02855 PF00117 Glutamine amidotransferase class-I CYG28_RS02860 PF00591 Glycosyl transferase family, a/b domain CYG28_RS02860 PF02885 Glycosyl transferase family, helical bundle domain CYG28_RS02865 PF00218 Indole-3-glycerol phosphate synthase CYG28_RS02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS02890 PF03466 LysR substrate binding domain CYG28_RS02895 PF00551 Formyl transferase CYG28_RS02905 PF01613 Flavin reductase like domain CYG28_RS02910 PF01243 Pyridoxamine 5'-phosphate oxidase CYG28_RS02910 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CYG28_RS02920 PF07690 Major Facilitator Superfamily CYG28_RS02925 PF00899 ThiF family CYG28_RS02930 PF07702 UTRA domain CYG28_RS02930 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS02935 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS02935 PF00501 AMP-binding enzyme CYG28_RS02940 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS02955 PF01063 Amino-transferase class IV CYG28_RS02960 PF04715 Anthranilate synthase component I, N terminal region CYG28_RS02960 PF00425 chorismate binding enzyme CYG28_RS02965 PF17755 UvrA DNA-binding domain CYG28_RS02965 PF17760 UvrA interaction domain CYG28_RS02965 PF00005 ABC transporter CYG28_RS02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS02975 PF03466 LysR substrate binding domain CYG28_RS02980 PF00535 Glycosyl transferase family 2 CYG28_RS02985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS02990 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS03025 PF03776 Septum formation topological specificity factor MinE CYG28_RS03030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYG28_RS03035 PF05209 Septum formation inhibitor MinC, N-terminal domain CYG28_RS03035 PF03775 Septum formation inhibitor MinC, C-terminal domain CYG28_RS03040 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYG28_RS03040 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CYG28_RS03045 PF01654 Cytochrome bd terminal oxidase subunit I CYG28_RS03055 PF02702 Osmosensitive K+ channel His kinase sensor domain CYG28_RS03055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS03055 PF13493 Domain of unknown function (DUF4118) CYG28_RS03060 PF00072 Response regulator receiver domain CYG28_RS03060 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS03075 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS03080 PF04391 Protein of unknown function (DUF533) CYG28_RS03100 PF01476 LysM domain CYG28_RS03100 PF01464 Transglycosylase SLT domain CYG28_RS03105 PF00753 Metallo-beta-lactamase superfamily CYG28_RS03105 PF16123 Hydroxyacylglutathione hydrolase C-terminus CYG28_RS03110 PF08241 Methyltransferase domain CYG28_RS03115 PF00075 RNase H CYG28_RS03165 PF01575 MaoC like domain CYG28_RS03180 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS03185 PF00106 short chain dehydrogenase CYG28_RS03195 PF00005 ABC transporter CYG28_RS03195 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS03200 PF00005 ABC transporter CYG28_RS03205 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS03215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS03215 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS03215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS03220 PF00440 Bacterial regulatory proteins, tetR family CYG28_RS03220 PF08361 MAATS-type transcriptional repressor, C-terminal region CYG28_RS03225 PF00501 AMP-binding enzyme CYG28_RS03225 PF14535 AMP-binding enzyme C-terminal domain CYG28_RS03230 PF02515 CoA-transferase family III CYG28_RS03250 PF04285 Protein of unknown function (DUF444) CYG28_RS03255 PF04293 SpoVR like protein CYG28_RS03270 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS03275 PF05034 Methylaspartate ammonia-lyase N-terminus CYG28_RS03275 PF07476 Methylaspartate ammonia-lyase C-terminus CYG28_RS03280 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS03280 PF07702 UTRA domain CYG28_RS03300 PF00376 MerR family regulatory protein CYG28_RS03300 PF09278 MerR, DNA binding CYG28_RS03310 PF01774 UreD urease accessory protein CYG28_RS03315 PF00547 Urease, gamma subunit CYG28_RS03320 PF04955 HupE / UreJ protein CYG28_RS03325 PF00699 Urease beta subunit CYG28_RS03330 PF01979 Amidohydrolase family CYG28_RS03330 PF00449 Urease alpha-subunit, N-terminal domain CYG28_RS03335 PF02814 UreE urease accessory protein, N-terminal domain CYG28_RS03335 PF05194 UreE urease accessory protein, C-terminal domain CYG28_RS03340 PF01730 UreF CYG28_RS03345 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYG28_RS03355 PF07171 MlrC C-terminus CYG28_RS03355 PF07364 Metallopeptidase family M81 CYG28_RS03365 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS03370 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS03375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS03385 PF00202 Aminotransferase class-III CYG28_RS03390 PF00155 Aminotransferase class I and II CYG28_RS03390 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS03395 PF00186 Dihydrofolate reductase CYG28_RS03400 PF00303 Thymidylate synthase CYG28_RS03410 PF03232 Ubiquinone biosynthesis protein COQ7 CYG28_RS03415 PF00953 Glycosyl transferase family 4 CYG28_RS03420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYG28_RS03420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYG28_RS03420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYG28_RS03425 PF01370 NAD dependent epimerase/dehydratase family CYG28_RS03430 PF03023 Lipid II flippase MurJ CYG28_RS03435 PF00534 Glycosyl transferases group 1 CYG28_RS03435 PF13439 Glycosyltransferase Family 4 CYG28_RS03440 PF13537 Glutamine amidotransferase domain CYG28_RS03440 PF00733 Asparagine synthase CYG28_RS03445 PF13439 Glycosyltransferase Family 4 CYG28_RS03445 PF00534 Glycosyl transferases group 1 CYG28_RS03450 PF00534 Glycosyl transferases group 1 CYG28_RS03450 PF13439 Glycosyltransferase Family 4 CYG28_RS03455 PF13477 Glycosyl transferase 4-like CYG28_RS03455 PF00534 Glycosyl transferases group 1 CYG28_RS03460 PF00342 Phosphoglucose isomerase CYG28_RS03465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYG28_RS03465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYG28_RS03465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYG28_RS03465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYG28_RS03475 PF02913 FAD linked oxidases, C-terminal domain CYG28_RS03475 PF01565 FAD binding domain CYG28_RS03480 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS03480 PF00072 Response regulator receiver domain CYG28_RS03485 PF08521 Two-component sensor kinase N-terminal CYG28_RS03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS03485 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS03490 PF00884 Sulfatase CYG28_RS03500 PF04209 homogentisate 1,2-dioxygenase CYG28_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS03505 PF03466 LysR substrate binding domain CYG28_RS03515 PF01494 FAD binding domain CYG28_RS03525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYG28_RS03525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYG28_RS03525 PF06827 Zinc finger found in FPG and IleRS CYG28_RS03535 PF03550 Outer membrane lipoprotein LolB CYG28_RS03540 PF00288 GHMP kinases N terminal domain CYG28_RS03540 PF08544 GHMP kinases C terminal CYG28_RS03550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYG28_RS03550 PF14572 Phosphoribosyl synthetase-associated domain CYG28_RS03555 PF01386 Ribosomal L25p family CYG28_RS03555 PF14693 Ribosomal protein TL5, C-terminal domain CYG28_RS03560 PF01195 Peptidyl-tRNA hydrolase CYG28_RS03570 PF06071 Protein of unknown function (DUF933) CYG28_RS03570 PF01926 50S ribosome-binding GTPase CYG28_RS03575 PF00589 Phage integrase family CYG28_RS03575 PF13356 Arm DNA-binding domain CYG28_RS03595 PF01555 DNA methylase CYG28_RS03600 PF13175 AAA ATPase domain CYG28_RS03635 PF13361 UvrD-like helicase C-terminal domain CYG28_RS03635 PF00580 UvrD/REP helicase N-terminal domain CYG28_RS03655 PF12951 Passenger-associated-transport-repeat CYG28_RS03665 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS03665 PF00072 Response regulator receiver domain CYG28_RS03680 PF00440 Bacterial regulatory proteins, tetR family CYG28_RS03680 PF17938 Tetracyclin repressor-like, C-terminal domain CYG28_RS03715 PF01266 FAD dependent oxidoreductase CYG28_RS03730 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS03785 PF00561 alpha/beta hydrolase fold CYG28_RS03795 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS03800 PF03459 TOBE domain CYG28_RS03800 PF00005 ABC transporter CYG28_RS03805 PF13091 PLD-like domain CYG28_RS03815 PF03167 Uracil DNA glycosylase superfamily CYG28_RS03820 PF00270 DEAD/DEAH box helicase CYG28_RS03820 PF00271 Helicase conserved C-terminal domain CYG28_RS03830 PF12627 Probable RNA and SrmB- binding site of polymerase A CYG28_RS03830 PF01743 Poly A polymerase head domain CYG28_RS03835 PF01464 Transglycosylase SLT domain CYG28_RS03835 PF14718 Soluble lytic murein transglycosylase L domain CYG28_RS03845 PF00083 Sugar (and other) transporter CYG28_RS03845 PF07690 Major Facilitator Superfamily CYG28_RS03850 PF00850 Histone deacetylase domain CYG28_RS03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS03855 PF03466 LysR substrate binding domain CYG28_RS03865 PF02219 Methylenetetrahydrofolate reductase CYG28_RS03870 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CYG28_RS03875 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CYG28_RS03875 PF05221 S-adenosyl-L-homocysteine hydrolase CYG28_RS03880 PF00534 Glycosyl transferases group 1 CYG28_RS03880 PF13439 Glycosyltransferase Family 4 CYG28_RS03890 PF02772 S-adenosylmethionine synthetase, central domain CYG28_RS03890 PF00438 S-adenosylmethionine synthetase, N-terminal domain CYG28_RS03890 PF02773 S-adenosylmethionine synthetase, C-terminal domain CYG28_RS03900 PF03279 Bacterial lipid A biosynthesis acyltransferase CYG28_RS03905 PF01678 Diaminopimelate epimerase CYG28_RS03915 PF02899 Phage integrase, N-terminal SAM-like domain CYG28_RS03915 PF00589 Phage integrase family CYG28_RS03920 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS03920 PF00593 TonB dependent receptor CYG28_RS03925 PF03824 High-affinity nickel-transport protein CYG28_RS03935 PF01297 Zinc-uptake complex component A periplasmic CYG28_RS03940 PF00950 ABC 3 transport family CYG28_RS03945 PF00005 ABC transporter CYG28_RS03950 PF01475 Ferric uptake regulator family CYG28_RS03955 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYG28_RS03955 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYG28_RS03960 PF01258 Prokaryotic dksA/traR C4-type zinc finger CYG28_RS03965 PF00227 Proteasome subunit CYG28_RS03970 PF00004 ATPase family associated with various cellular activities (AAA) CYG28_RS03970 PF07724 AAA domain (Cdc48 subfamily) CYG28_RS03970 PF10431 C-terminal, D2-small domain, of ClpB protein CYG28_RS03985 PF01923 Cobalamin adenosyltransferase CYG28_RS04005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG28_RS04005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYG28_RS04015 PF01970 Tripartite tricarboxylate transporter TctA family CYG28_RS04055 PF01790 Prolipoprotein diacylglyceryl transferase CYG28_RS04060 PF00920 Dehydratase family CYG28_RS04065 PF00034 Cytochrome c CYG28_RS04070 PF01625 Peptide methionine sulfoxide reductase CYG28_RS04075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG28_RS04080 PF01037 Lrp/AsnC ligand binding domain CYG28_RS04120 PF07687 Peptidase dimerisation domain CYG28_RS04120 PF01546 Peptidase family M20/M25/M40 CYG28_RS04125 PF01979 Amidohydrolase family CYG28_RS04130 PF00005 ABC transporter CYG28_RS04130 PF16326 ABC transporter C-terminal domain CYG28_RS04130 PF12848 ABC transporter CYG28_RS04140 PF02381 MraZ protein, putative antitoxin-like CYG28_RS04145 PF01795 MraW methylase family CYG28_RS04150 PF04999 Cell division protein FtsL CYG28_RS04155 PF03717 Penicillin-binding Protein dimerisation domain CYG28_RS04155 PF00905 Penicillin binding protein transpeptidase domain CYG28_RS04160 PF08245 Mur ligase middle domain CYG28_RS04160 PF02875 Mur ligase family, glutamate ligase domain CYG28_RS04165 PF00953 Glycosyl transferase family 4 CYG28_RS04170 PF08245 Mur ligase middle domain CYG28_RS04170 PF02875 Mur ligase family, glutamate ligase domain CYG28_RS04175 PF01098 Cell cycle protein CYG28_RS04180 PF03033 Glycosyltransferase family 28 N-terminal domain CYG28_RS04180 PF04101 Glycosyltransferase family 28 C-terminal domain CYG28_RS04185 PF01225 Mur ligase family, catalytic domain CYG28_RS04185 PF02875 Mur ligase family, glutamate ligase domain CYG28_RS04185 PF08245 Mur ligase middle domain CYG28_RS04190 PF01820 D-ala D-ala ligase N-terminus CYG28_RS04190 PF07478 D-ala D-ala ligase C-terminus CYG28_RS04195 PF03799 Cell division protein FtsQ CYG28_RS04195 PF08478 POTRA domain, FtsQ-type CYG28_RS04200 PF02491 SHS2 domain inserted in FTSA CYG28_RS04205 PF00091 Tubulin/FtsZ family, GTPase domain CYG28_RS04205 PF12327 FtsZ family, C-terminal domain CYG28_RS04210 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CYG28_RS04220 PF01551 Peptidase family M23 CYG28_RS04220 PF08525 Opacity-associated protein A N-terminal motif CYG28_RS04220 PF01476 LysM domain CYG28_RS04225 PF02810 SEC-C motif CYG28_RS04225 PF07516 SecA Wing and Scaffold domain CYG28_RS04225 PF01043 SecA preprotein cross-linking domain CYG28_RS04225 PF07517 SecA DEAD-like domain CYG28_RS04235 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS04245 PF00106 short chain dehydrogenase CYG28_RS04250 PF01266 FAD dependent oxidoreductase CYG28_RS04255 PF01037 Lrp/AsnC ligand binding domain CYG28_RS04265 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CYG28_RS04275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYG28_RS04275 PF08501 Shikimate dehydrogenase substrate binding domain CYG28_RS04275 PF01488 Shikimate / quinate 5-dehydrogenase CYG28_RS04285 PF00773 RNB domain CYG28_RS04290 PF05728 Uncharacterised protein family (UPF0227) CYG28_RS04295 PF08245 Mur ligase middle domain CYG28_RS04295 PF02875 Mur ligase family, glutamate ligase domain CYG28_RS04295 PF01225 Mur ligase family, catalytic domain CYG28_RS04300 PF08534 Redoxin CYG28_RS04305 PF01220 Dehydroquinase class II CYG28_RS04310 PF00364 Biotin-requiring enzyme CYG28_RS04315 PF02785 Biotin carboxylase C-terminal domain CYG28_RS04315 PF00289 Biotin carboxylase, N-terminal domain CYG28_RS04315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG28_RS04330 PF00294 pfkB family carbohydrate kinase CYG28_RS04355 PF03062 MBOAT, membrane-bound O-acyltransferase family CYG28_RS04360 PF00501 AMP-binding enzyme CYG28_RS04360 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS04375 PF00268 Ribonucleotide reductase, small chain CYG28_RS04380 PF00317 Ribonucleotide reductase, all-alpha domain CYG28_RS04380 PF02867 Ribonucleotide reductase, barrel domain CYG28_RS04380 PF03477 ATP cone domain CYG28_RS04395 PF01037 Lrp/AsnC ligand binding domain CYG28_RS04410 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYG28_RS04415 PF13380 CoA binding domain CYG28_RS04415 PF13607 Succinyl-CoA ligase like flavodoxin domain CYG28_RS04415 PF00583 Acetyltransferase (GNAT) family CYG28_RS04430 PF07729 FCD domain CYG28_RS04430 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS04440 PF03880 DbpA RNA binding domain CYG28_RS04440 PF00271 Helicase conserved C-terminal domain CYG28_RS04440 PF00270 DEAD/DEAH box helicase CYG28_RS04445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG28_RS04450 PF00857 Isochorismatase family CYG28_RS04455 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS04460 PF00005 ABC transporter CYG28_RS04470 PF02230 Phospholipase/Carboxylesterase CYG28_RS04475 PF04751 Protein of unknown function (DUF615) CYG28_RS04480 PF01523 Putative modulator of DNA gyrase CYG28_RS04485 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS04490 PF00572 Ribosomal protein L13 CYG28_RS04495 PF00380 Ribosomal protein S9/S16 CYG28_RS04500 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYG28_RS04500 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYG28_RS04510 PF01521 Iron-sulphur cluster biosynthesis CYG28_RS04515 PF03702 Anhydro-N-acetylmuramic acid kinase CYG28_RS04520 PF01551 Peptidase family M23 CYG28_RS04520 PF08460 Bacterial SH3 domain CYG28_RS04530 PF01479 S4 domain CYG28_RS04530 PF00579 tRNA synthetases class I (W and Y) CYG28_RS04540 PF00464 Serine hydroxymethyltransferase CYG28_RS04545 PF03477 ATP cone domain CYG28_RS04560 PF01872 RibD C-terminal domain CYG28_RS04560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYG28_RS04580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS04580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS04580 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS04580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS04580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS04580 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS04590 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS04595 PF03466 LysR substrate binding domain CYG28_RS04595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS04600 PF02515 CoA-transferase family III CYG28_RS04620 PF05726 Pirin C-terminal cupin domain CYG28_RS04620 PF02678 Pirin CYG28_RS04635 PF00072 Response regulator receiver domain CYG28_RS04640 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYG28_RS04640 PF06481 COX Aromatic Rich Motif CYG28_RS04645 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG28_RS04650 PF00510 Cytochrome c oxidase subunit III CYG28_RS04655 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CYG28_RS04660 PF01022 Bacterial regulatory protein, arsR family CYG28_RS04680 PF05114 Protein of unknown function (DUF692) CYG28_RS04695 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS04695 PF00593 TonB dependent receptor CYG28_RS04710 PF01476 LysM domain CYG28_RS04710 PF01551 Peptidase family M23 CYG28_RS04725 PF04461 Protein of unknown function (DUF520) CYG28_RS04735 PF08281 Sigma-70, region 4 CYG28_RS04735 PF04542 Sigma-70 region 2 CYG28_RS04755 PF00795 Carbon-nitrogen hydrolase CYG28_RS04760 PF01523 Putative modulator of DNA gyrase CYG28_RS04765 PF00793 DAHP synthetase I family CYG28_RS04770 PF05594 Haemagluttinin repeat CYG28_RS04770 PF13332 Hemagglutinin repeat CYG28_RS04770 PF05860 haemagglutination activity domain CYG28_RS04770 PF13018 Extended Signal Peptide of Type V secretion system CYG28_RS04770 PF05594 Haemagluttinin repeat CYG28_RS04770 PF05860 haemagglutination activity domain CYG28_RS04770 PF13018 Extended Signal Peptide of Type V secretion system CYG28_RS04770 PF13332 Hemagglutinin repeat CYG28_RS04775 PF01565 FAD binding domain CYG28_RS04775 PF02913 FAD linked oxidases, C-terminal domain CYG28_RS04780 PF01565 FAD binding domain CYG28_RS04780 PF02913 FAD linked oxidases, C-terminal domain CYG28_RS04785 PF01565 FAD binding domain CYG28_RS04790 PF13183 4Fe-4S dicluster domain CYG28_RS04790 PF02754 Cysteine-rich domain CYG28_RS04795 PF00756 Putative esterase CYG28_RS04800 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS04800 PF00593 TonB dependent receptor CYG28_RS04810 PF02233 NAD(P) transhydrogenase beta subunit CYG28_RS04820 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYG28_RS04820 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYG28_RS04830 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS04835 PF03466 LysR substrate binding domain CYG28_RS04845 PF01925 Sulfite exporter TauE/SafE CYG28_RS04850 PF13417 Glutathione S-transferase, N-terminal domain CYG28_RS04850 PF00043 Glutathione S-transferase, C-terminal domain CYG28_RS04855 PF08328 Adenylosuccinate lyase C-terminal CYG28_RS04855 PF00206 Lyase CYG28_RS04860 PF01322 Cytochrome C' CYG28_RS04880 PF01594 AI-2E family transporter CYG28_RS04890 PF07729 FCD domain CYG28_RS04890 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS04900 PF01425 Amidase CYG28_RS04905 PF02515 CoA-transferase family III CYG28_RS04910 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS04925 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS04930 PF00005 ABC transporter CYG28_RS04945 PF09339 IclR helix-turn-helix domain CYG28_RS04945 PF01614 Bacterial transcriptional regulator CYG28_RS04955 PF00501 AMP-binding enzyme CYG28_RS04955 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS04960 PF01042 Endoribonuclease L-PSP CYG28_RS04965 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS04980 PF00005 ABC transporter CYG28_RS05000 PF03466 LysR substrate binding domain CYG28_RS05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS05010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYG28_RS05015 PF07690 Major Facilitator Superfamily CYG28_RS05020 PF03466 LysR substrate binding domain CYG28_RS05020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS05035 PF01425 Amidase CYG28_RS05040 PF00677 Lumazine binding domain CYG28_RS05045 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS05050 PF13404 AsnC-type helix-turn-helix domain CYG28_RS05050 PF01037 Lrp/AsnC ligand binding domain CYG28_RS05060 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS05060 PF00501 AMP-binding enzyme CYG28_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS05075 PF00005 ABC transporter CYG28_RS05090 PF00107 Zinc-binding dehydrogenase CYG28_RS05090 PF08240 Alcohol dehydrogenase GroES-like domain CYG28_RS05110 PF00403 Heavy-metal-associated domain CYG28_RS05115 PF01966 HD domain CYG28_RS05120 PF00155 Aminotransferase class I and II CYG28_RS05125 PF03466 LysR substrate binding domain CYG28_RS05125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS05135 PF00083 Sugar (and other) transporter CYG28_RS05155 PF13609 Gram-negative porin CYG28_RS05160 PF02548 Ketopantoate hydroxymethyltransferase CYG28_RS05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS05165 PF03466 LysR substrate binding domain CYG28_RS05230 PF00440 Bacterial regulatory proteins, tetR family CYG28_RS05240 PF05170 AsmA family CYG28_RS05245 PF03352 Methyladenine glycosylase CYG28_RS05250 PF09278 MerR, DNA binding CYG28_RS05250 PF00376 MerR family regulatory protein CYG28_RS05265 PF01547 Bacterial extracellular solute-binding protein CYG28_RS05280 PF08402 TOBE domain CYG28_RS05280 PF00005 ABC transporter CYG28_RS05285 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS05290 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS05290 PF14785 Maltose transport system permease protein MalF P2 domain CYG28_RS05310 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS05315 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS05315 PF07729 FCD domain CYG28_RS05345 PF00465 Iron-containing alcohol dehydrogenase CYG28_RS05360 PF03180 NLPA lipoprotein CYG28_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS05370 PF00005 ABC transporter CYG28_RS05370 PF09383 NIL domain CYG28_RS05375 PF01055 Glycosyl hydrolases family 31 CYG28_RS05375 PF13802 Galactose mutarotase-like CYG28_RS05385 PF00459 Inositol monophosphatase family CYG28_RS05400 PF00501 AMP-binding enzyme CYG28_RS05400 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS05405 PF01546 Peptidase family M20/M25/M40 CYG28_RS05405 PF07687 Peptidase dimerisation domain CYG28_RS05410 PF03466 LysR substrate binding domain CYG28_RS05410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS05415 PF03601 Conserved hypothetical protein 698 CYG28_RS05420 PF03061 Thioesterase superfamily CYG28_RS05425 PF03448 MgtE intracellular N domain CYG28_RS05425 PF01769 Divalent cation transporter CYG28_RS05425 PF00571 CBS domain CYG28_RS05445 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS05455 PF02609 Exonuclease VII small subunit CYG28_RS05460 PF00348 Polyprenyl synthetase CYG28_RS05465 PF02780 Transketolase, C-terminal domain CYG28_RS05465 PF02779 Transketolase, pyrimidine binding domain CYG28_RS05465 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYG28_RS05470 PF02649 Type I GTP cyclohydrolase folE2 CYG28_RS05475 PF01250 Ribosomal protein S6 CYG28_RS05485 PF01084 Ribosomal protein S18 CYG28_RS05490 PF03948 Ribosomal protein L9, C-terminal domain CYG28_RS05490 PF01281 Ribosomal protein L9, N-terminal domain CYG28_RS05500 PF00772 DnaB-like helicase N terminal domain CYG28_RS05500 PF03796 DnaB-like helicase C terminal domain CYG28_RS05505 PF13593 SBF-like CPA transporter family (DUF4137) CYG28_RS05510 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYG28_RS05515 PF02562 PhoH-like protein CYG28_RS05515 PF13638 PIN domain CYG28_RS05520 PF00578 AhpC/TSA family CYG28_RS05525 PF04430 Protein of unknown function (DUF498/DUF598) CYG28_RS05530 PF00155 Aminotransferase class I and II CYG28_RS05535 PF01842 ACT domain CYG28_RS05535 PF03447 Homoserine dehydrogenase, NAD binding domain CYG28_RS05535 PF00742 Homoserine dehydrogenase CYG28_RS05540 PF14821 Threonine synthase N terminus CYG28_RS05540 PF00291 Pyridoxal-phosphate dependent enzyme CYG28_RS05555 PF02615 Malate/L-lactate dehydrogenase CYG28_RS05585 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG28_RS05590 PF01649 Ribosomal protein S20 CYG28_RS05600 PF03023 Lipid II flippase MurJ CYG28_RS05605 PF00106 short chain dehydrogenase CYG28_RS05610 PF05191 Adenylate kinase, active site lid CYG28_RS05615 PF02348 Cytidylyltransferase CYG28_RS05620 PF03966 Trm112p-like protein CYG28_RS05625 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CYG28_RS05630 PF02472 Biopolymer transport protein ExbD/TolR CYG28_RS05635 PF01618 MotA/TolQ/ExbB proton channel family CYG28_RS05645 PF02601 Exonuclease VII, large subunit CYG28_RS05645 PF13742 OB-fold nucleic acid binding domain CYG28_RS05650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYG28_RS05650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYG28_RS05655 PF00654 Voltage gated chloride channel CYG28_RS05660 PF00108 Thiolase, N-terminal domain CYG28_RS05660 PF02803 Thiolase, C-terminal domain CYG28_RS05670 PF00313 'Cold-shock' DNA-binding domain CYG28_RS05675 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYG28_RS05680 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CYG28_RS05680 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CYG28_RS05680 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CYG28_RS05680 PF17962 Bacterial macroglobulin domain 6 CYG28_RS05680 PF01835 MG2 domain CYG28_RS05680 PF00207 Alpha-2-macroglobulin family CYG28_RS05680 PF07703 Alpha-2-macroglobulin bait region domain CYG28_RS05680 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CYG28_RS05685 PF06832 Penicillin-Binding Protein C-terminus Family CYG28_RS05685 PF00912 Transglycosylase CYG28_RS05685 PF00905 Penicillin binding protein transpeptidase domain CYG28_RS05690 PF17871 AAA lid domain CYG28_RS05690 PF07724 AAA domain (Cdc48 subfamily) CYG28_RS05690 PF00004 ATPase family associated with various cellular activities (AAA) CYG28_RS05690 PF02861 Clp amino terminal domain, pathogenicity island component CYG28_RS05690 PF10431 C-terminal, D2-small domain, of ClpB protein CYG28_RS05695 PF04403 Paraquat-inducible protein A CYG28_RS05700 PF02470 MlaD protein CYG28_RS05710 PF01619 Proline dehydrogenase CYG28_RS05710 PF14850 DNA-binding domain of Proline dehydrogenase CYG28_RS05710 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CYG28_RS05710 PF00171 Aldehyde dehydrogenase family CYG28_RS05720 PF13458 Periplasmic binding protein CYG28_RS05725 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS05730 PF11862 Domain of unknown function (DUF3382) CYG28_RS05730 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS05735 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS05735 PF00005 ABC transporter CYG28_RS05740 PF00005 ABC transporter CYG28_RS05745 PF07690 Major Facilitator Superfamily CYG28_RS05750 PF00440 Bacterial regulatory proteins, tetR family CYG28_RS05765 PF00543 Nitrogen regulatory protein P-II CYG28_RS05770 PF04380 Membrane fusogenic activity CYG28_RS05785 PF07690 Major Facilitator Superfamily CYG28_RS05785 PF00083 Sugar (and other) transporter CYG28_RS05795 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG28_RS05800 PF00510 Cytochrome c oxidase subunit III CYG28_RS05805 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CYG28_RS05810 PF02104 SURF1 family CYG28_RS05835 PF13411 MerR HTH family regulatory protein CYG28_RS05840 PF00403 Heavy-metal-associated domain CYG28_RS05860 PF06968 Biotin and Thiamin Synthesis associated domain CYG28_RS05860 PF04055 Radical SAM superfamily CYG28_RS05875 PF08534 Redoxin CYG28_RS05885 PF01738 Dienelactone hydrolase family CYG28_RS05895 PF01967 MoaC family CYG28_RS05905 PF02391 MoaE protein CYG28_RS05910 PF00994 Probable molybdopterin binding domain CYG28_RS05915 PF03454 MoeA C-terminal region (domain IV) CYG28_RS05915 PF03453 MoeA N-terminal region (domain I and II) CYG28_RS05915 PF00994 Probable molybdopterin binding domain CYG28_RS05920 PF04055 Radical SAM superfamily CYG28_RS05920 PF06463 Molybdenum Cofactor Synthesis C CYG28_RS05955 PF14698 Argininosuccinate lyase C-terminal CYG28_RS05955 PF00206 Lyase CYG28_RS05960 PF00924 Mechanosensitive ion channel CYG28_RS05965 PF02540 NAD synthase CYG28_RS05965 PF00795 Carbon-nitrogen hydrolase CYG28_RS05970 PF00543 Nitrogen regulatory protein P-II CYG28_RS05995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS05995 PF03466 LysR substrate binding domain CYG28_RS06005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS06010 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS06025 PF03193 RsgA GTPase CYG28_RS06030 PF01435 Peptidase family M48 CYG28_RS06035 PF00929 Exonuclease CYG28_RS06040 PF03853 YjeF-related protein N-terminus CYG28_RS06045 PF08223 PaaX-like protein C-terminal domain CYG28_RS06045 PF07848 PaaX-like protein CYG28_RS06050 PF05138 Phenylacetic acid catabolic protein CYG28_RS06055 PF06243 Phenylacetic acid degradation B CYG28_RS06060 PF05138 Phenylacetic acid catabolic protein CYG28_RS06065 PF01883 Iron-sulfur cluster assembly protein CYG28_RS06085 PF00171 Aldehyde dehydrogenase family CYG28_RS06090 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS06095 PF03061 Thioesterase superfamily CYG28_RS06100 PF00501 AMP-binding enzyme CYG28_RS06100 PF14535 AMP-binding enzyme C-terminal domain CYG28_RS06105 PF16970 Type-1 fimbrial protein, A CYG28_RS06125 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS06130 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG28_RS06130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS06135 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG28_RS06140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CYG28_RS06140 PF02769 AIR synthase related protein, C-terminal domain CYG28_RS06140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CYG28_RS06145 PF05860 haemagglutination activity domain CYG28_RS06145 PF05594 Haemagluttinin repeat CYG28_RS06145 PF13018 Extended Signal Peptide of Type V secretion system CYG28_RS06145 PF13332 Hemagglutinin repeat CYG28_RS06175 PF00596 Class II Aldolase and Adducin N-terminal domain CYG28_RS06180 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS06185 PF01242 6-pyruvoyl tetrahydropterin synthase CYG28_RS06195 PF00472 RF-1 domain CYG28_RS06215 PF00701 Dihydrodipicolinate synthetase family CYG28_RS06220 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS06245 PF00890 FAD binding domain CYG28_RS06245 PF14537 Cytochrome c3 CYG28_RS06250 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS06265 PF01266 FAD dependent oxidoreductase CYG28_RS06265 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CYG28_RS06270 PF08220 DeoR-like helix-turn-helix domain CYG28_RS06270 PF00455 DeoR C terminal sensor domain CYG28_RS06275 PF17912 MalK OB fold domain CYG28_RS06275 PF00005 ABC transporter CYG28_RS06285 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS06320 PF01037 Lrp/AsnC ligand binding domain CYG28_RS06325 PF01266 FAD dependent oxidoreductase CYG28_RS06330 PF00149 Calcineurin-like phosphoesterase CYG28_RS06330 PF12320 Type 5 capsule protein repressor C-terminal domain CYG28_RS06370 PF00571 CBS domain CYG28_RS06370 PF00478 IMP dehydrogenase / GMP reductase domain CYG28_RS06375 PF02540 NAD synthase CYG28_RS06375 PF00958 GMP synthase C terminal domain CYG28_RS06375 PF00117 Glutamine amidotransferase class-I CYG28_RS06390 PF07804 HipA-like C-terminal domain CYG28_RS06390 PF13657 HipA N-terminal domain CYG28_RS06400 PF07690 Major Facilitator Superfamily CYG28_RS06415 PF01979 Amidohydrolase family CYG28_RS06425 PF00005 ABC transporter CYG28_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS06460 PF00916 Sulfate permease family CYG28_RS06460 PF01740 STAS domain CYG28_RS06465 PF00753 Metallo-beta-lactamase superfamily CYG28_RS06465 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CYG28_RS06465 PF10996 Beta-Casp domain CYG28_RS06485 PF12706 Beta-lactamase superfamily domain CYG28_RS06490 PF01965 DJ-1/PfpI family CYG28_RS06490 PF12833 Helix-turn-helix domain CYG28_RS06495 PF03466 LysR substrate binding domain CYG28_RS06495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS06510 PF08240 Alcohol dehydrogenase GroES-like domain CYG28_RS06510 PF00107 Zinc-binding dehydrogenase CYG28_RS06515 PF07690 Major Facilitator Superfamily CYG28_RS06520 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS06520 PF00155 Aminotransferase class I and II CYG28_RS06530 PF01810 LysE type translocator CYG28_RS06540 PF01546 Peptidase family M20/M25/M40 CYG28_RS06540 PF07687 Peptidase dimerisation domain CYG28_RS06545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS06550 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS06555 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG28_RS06555 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS06560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS06560 PF00005 ABC transporter CYG28_RS06565 PF00356 Bacterial regulatory proteins, lacI family CYG28_RS06595 PF09335 SNARE associated Golgi protein CYG28_RS06610 PF13847 Methyltransferase domain CYG28_RS06625 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS06625 PF00155 Aminotransferase class I and II CYG28_RS06635 PF00692 dUTPase CYG28_RS06645 PF01632 Ribosomal protein L35 CYG28_RS06650 PF00453 Ribosomal protein L20 CYG28_RS06655 PF01409 tRNA synthetases class II core domain (F) CYG28_RS06655 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CYG28_RS06660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CYG28_RS06660 PF01588 Putative tRNA binding domain CYG28_RS06660 PF03147 Ferredoxin-fold anticodon binding domain CYG28_RS06660 PF03484 tRNA synthetase B5 domain CYG28_RS06660 PF03483 B3/4 domain CYG28_RS06665 PF00216 Bacterial DNA-binding protein CYG28_RS06710 PF04231 Endonuclease I CYG28_RS06730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYG28_RS06730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYG28_RS06735 PF04381 Putative exonuclease, RdgC CYG28_RS06745 PF02515 CoA-transferase family III CYG28_RS06750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS06750 PF03466 LysR substrate binding domain CYG28_RS06770 PF00106 short chain dehydrogenase CYG28_RS06780 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS06785 PF00005 ABC transporter CYG28_RS06785 PF08402 TOBE domain CYG28_RS06790 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS06790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG28_RS06790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG28_RS06795 PF08946 Osmosensory transporter coiled coil CYG28_RS06795 PF00083 Sugar (and other) transporter CYG28_RS06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS06800 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS06805 PF00072 Response regulator receiver domain CYG28_RS06805 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS06810 PF00154 recA bacterial DNA recombination protein CYG28_RS06815 PF02631 RecX family CYG28_RS06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS06820 PF03466 LysR substrate binding domain CYG28_RS06825 PF08267 Cobalamin-independent synthase, N-terminal domain CYG28_RS06825 PF01717 Cobalamin-independent synthase, Catalytic domain CYG28_RS06835 PF08442 ATP-grasp domain CYG28_RS06835 PF00549 CoA-ligase CYG28_RS06840 PF00549 CoA-ligase CYG28_RS06840 PF02629 CoA binding domain CYG28_RS06845 PF03741 Integral membrane protein TerC family CYG28_RS06850 PF03741 Integral membrane protein TerC family CYG28_RS06855 PF03900 Porphobilinogen deaminase, C-terminal domain CYG28_RS06855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CYG28_RS06875 PF00719 Inorganic pyrophosphatase CYG28_RS06880 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYG28_RS06915 PF13629 Pilus formation protein N terminal region CYG28_RS06915 PF04972 BON domain CYG28_RS06915 PF00263 Bacterial type II and III secretion system protein CYG28_RS06920 PF00437 Type II/IV secretion system protein CYG28_RS06935 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS06940 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYG28_RS06940 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYG28_RS06945 PF02615 Malate/L-lactate dehydrogenase CYG28_RS06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS06950 PF03466 LysR substrate binding domain CYG28_RS06960 PF01266 FAD dependent oxidoreductase CYG28_RS06965 PF04267 Sarcosine oxidase, delta subunit family CYG28_RS06970 PF17806 Sarcosine oxidase A3 domain CYG28_RS06970 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS06970 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYG28_RS06970 PF01571 Aminomethyltransferase folate-binding domain CYG28_RS06980 PF00551 Formyl transferase CYG28_RS06985 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS06995 PF00561 alpha/beta hydrolase fold CYG28_RS07005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CYG28_RS07005 PF01565 FAD binding domain CYG28_RS07010 PF05173 Dihydrodipicolinate reductase, C-terminus CYG28_RS07010 PF01113 Dihydrodipicolinate reductase, N-terminus CYG28_RS07015 PF04355 SmpA / OmlA family CYG28_RS07020 PF01475 Ferric uptake regulator family CYG28_RS07025 PF02463 RecF/RecN/SMC N terminal domain CYG28_RS07030 PF01513 ATP-NAD kinase CYG28_RS07035 PF01628 HrcA protein C terminal domain CYG28_RS07035 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CYG28_RS07040 PF00762 Ferrochelatase CYG28_RS07050 PF01025 GrpE CYG28_RS07060 PF00012 Hsp70 protein CYG28_RS07065 PF00226 DnaJ domain CYG28_RS07065 PF00684 DnaJ central domain CYG28_RS07065 PF01556 DnaJ C terminal domain CYG28_RS07070 PF00675 Insulinase (Peptidase family M16) CYG28_RS07070 PF05193 Peptidase M16 inactive domain CYG28_RS07090 PF01434 Peptidase family M41 CYG28_RS07090 PF17862 AAA+ lid domain CYG28_RS07090 PF00004 ATPase family associated with various cellular activities (AAA) CYG28_RS07100 PF00034 Cytochrome c CYG28_RS07115 PF00180 Isocitrate/isopropylmalate dehydrogenase CYG28_RS07135 PF00072 Response regulator receiver domain CYG28_RS07135 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS07145 PF02669 K+-transporting ATPase, c chain CYG28_RS07155 PF03814 Potassium-transporting ATPase A subunit CYG28_RS07170 PF00474 Sodium:solute symporter family CYG28_RS07185 PF00893 Small Multidrug Resistance protein CYG28_RS07190 PF01713 Smr domain CYG28_RS07190 PF00488 MutS domain V CYG28_RS07195 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS07200 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CYG28_RS07200 PF17854 FtsK alpha domain CYG28_RS07200 PF01580 FtsK/SpoIIIE family CYG28_RS07200 PF09397 Ftsk gamma domain CYG28_RS07205 PF03548 Outer membrane lipoprotein carrier protein LolA CYG28_RS07210 PF12002 MgsA AAA+ ATPase C terminal CYG28_RS07210 PF16193 AAA C-terminal domain CYG28_RS07210 PF00004 ATPase family associated with various cellular activities (AAA) CYG28_RS07215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG28_RS07215 PF02403 Seryl-tRNA synthetase N-terminal domain CYG28_RS07240 PF00990 Diguanylate cyclase, GGDEF domain CYG28_RS07240 PF17151 Periplasmic sensor domain CYG28_RS07255 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS07255 PF07660 Secretin and TonB N terminus short domain CYG28_RS07255 PF00593 TonB dependent receptor CYG28_RS07260 PF07690 Major Facilitator Superfamily CYG28_RS07280 PF06276 Ferric iron reductase FhuF-like transporter CYG28_RS07280 PF04183 IucA / IucC family CYG28_RS07290 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CYG28_RS07300 PF02254 TrkA-N domain CYG28_RS07300 PF00999 Sodium/hydrogen exchanger family CYG28_RS07305 PF00106 short chain dehydrogenase CYG28_RS07315 PF03883 Peroxide stress protein YaaA CYG28_RS07335 PF00990 Diguanylate cyclase, GGDEF domain CYG28_RS07355 PF00196 Bacterial regulatory proteins, luxR family CYG28_RS07360 PF03129 Anticodon binding domain CYG28_RS07360 PF02824 TGS domain CYG28_RS07360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYG28_RS07360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG28_RS07365 PF00707 Translation initiation factor IF-3, C-terminal domain CYG28_RS07365 PF05198 Translation initiation factor IF-3, N-terminal domain CYG28_RS07370 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CYG28_RS07370 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CYG28_RS07380 PF00381 PTS HPr component phosphorylation site CYG28_RS07385 PF02896 PEP-utilising enzyme, TIM barrel domain CYG28_RS07385 PF00391 PEP-utilising enzyme, mobile domain CYG28_RS07385 PF05524 PEP-utilising enzyme, N-terminal CYG28_RS07400 PF02423 Ornithine cyclodeaminase/mu-crystallin family CYG28_RS07410 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS07415 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS07420 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS07425 PF00005 ABC transporter CYG28_RS07440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG28_RS07440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG28_RS07450 PF02293 AmiS/UreI family transporter CYG28_RS07455 PF03069 Acetamidase/Formamidase family CYG28_RS07470 PF01116 Fructose-bisphosphate aldolase class-II CYG28_RS07480 PF01259 SAICAR synthetase CYG28_RS07485 PF15723 Motility quorum-sensing regulator, toxin of MqsA CYG28_RS07490 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CYG28_RS07500 PF02600 Disulfide bond formation protein DsbB CYG28_RS07505 PF00731 AIR carboxylase CYG28_RS07510 PF02222 ATP-grasp domain CYG28_RS07510 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CYG28_RS07515 PF03481 Putative GTP-binding controlling metal-binding CYG28_RS07515 PF01300 Telomere recombination CYG28_RS07520 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS07525 PF01614 Bacterial transcriptional regulator CYG28_RS07525 PF09339 IclR helix-turn-helix domain CYG28_RS07530 PF00491 Arginase family CYG28_RS07535 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS07540 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS07545 PF00005 ABC transporter CYG28_RS07550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS07550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS07560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS07560 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS07560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS07565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS07565 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS07565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS07570 PF03466 LysR substrate binding domain CYG28_RS07575 PF00589 Phage integrase family CYG28_RS07575 PF02899 Phage integrase, N-terminal SAM-like domain CYG28_RS07580 PF04073 Aminoacyl-tRNA editing domain CYG28_RS07585 PF01174 SNO glutamine amidotransferase family CYG28_RS07600 PF00768 D-alanyl-D-alanine carboxypeptidase CYG28_RS07610 PF07690 Major Facilitator Superfamily CYG28_RS07620 PF00580 UvrD/REP helicase N-terminal domain CYG28_RS07620 PF12705 PD-(D/E)XK nuclease superfamily CYG28_RS07620 PF13361 UvrD-like helicase C-terminal domain CYG28_RS07630 PF12169 DNA polymerase III subunits gamma and tau domain III CYG28_RS07630 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CYG28_RS07630 PF12170 DNA polymerase III tau subunit V interacting with alpha CYG28_RS07635 PF02575 YbaB/EbfC DNA-binding family CYG28_RS07640 PF13662 Toprim domain CYG28_RS07640 PF02132 RecR protein CYG28_RS07660 PF04228 Putative neutral zinc metallopeptidase CYG28_RS07665 PF01300 Telomere recombination CYG28_RS07705 PF03358 NADPH-dependent FMN reductase CYG28_RS07710 PF07311 Dodecin CYG28_RS07715 PF01624 MutS domain I CYG28_RS07715 PF05188 MutS domain II CYG28_RS07715 PF05192 MutS domain III CYG28_RS07715 PF00488 MutS domain V CYG28_RS07715 PF05190 MutS family domain IV CYG28_RS07720 PF08007 Cupin superfamily protein CYG28_RS07725 PF16970 Type-1 fimbrial protein, A CYG28_RS07730 PF06804 NlpB/DapX lipoprotein CYG28_RS07735 PF00701 Dihydrodipicolinate synthetase family CYG28_RS07750 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS07755 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS07760 PF00005 ABC transporter CYG28_RS07765 PF02824 TGS domain CYG28_RS07765 PF13291 ACT domain CYG28_RS07765 PF04607 Region found in RelA / SpoT proteins CYG28_RS07770 PF01192 RNA polymerase Rpb6 CYG28_RS07775 PF00625 Guanylate kinase CYG28_RS07780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYG28_RS07785 PF00034 Cytochrome c CYG28_RS07795 PF00877 NlpC/P60 family CYG28_RS07800 PF01048 Phosphorylase superfamily CYG28_RS07800 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CYG28_RS07820 PF08340 Domain of unknown function (DUF1732) CYG28_RS07820 PF03755 YicC-like family, N-terminal region CYG28_RS07825 PF03725 3' exoribonuclease family, domain 2 CYG28_RS07825 PF01138 3' exoribonuclease family, domain 1 CYG28_RS07835 PF03466 LysR substrate binding domain CYG28_RS07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS07845 PF00672 HAMP domain CYG28_RS07845 PF17154 Gammaproteobacterial periplasmic sensor domain CYG28_RS07845 PF00990 Diguanylate cyclase, GGDEF domain CYG28_RS07845 PF00563 EAL domain CYG28_RS07850 PF01725 Ham1 family CYG28_RS07860 PF06969 HemN C-terminal domain CYG28_RS07860 PF04055 Radical SAM superfamily CYG28_RS07865 PF00120 Glutamine synthetase, catalytic domain CYG28_RS07865 PF03951 Glutamine synthetase, beta-Grasp domain CYG28_RS07870 PF00989 PAS fold CYG28_RS07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS07870 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS07875 PF02954 Bacterial regulatory protein, Fis family CYG28_RS07875 PF00158 Sigma-54 interaction domain CYG28_RS07875 PF00072 Response regulator receiver domain CYG28_RS07880 PF03466 LysR substrate binding domain CYG28_RS07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS07885 PF17954 Quercetinase C-terminal cupin domain CYG28_RS07885 PF02678 Pirin CYG28_RS07890 PF02678 Pirin CYG28_RS07890 PF05726 Pirin C-terminal cupin domain CYG28_RS07900 PF00005 ABC transporter CYG28_RS07900 PF08402 TOBE domain CYG28_RS07905 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS07915 PF00970 Oxidoreductase FAD-binding domain CYG28_RS07915 PF00175 Oxidoreductase NAD-binding domain CYG28_RS07920 PF03466 LysR substrate binding domain CYG28_RS07920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS07930 PF00248 Aldo/keto reductase family CYG28_RS07940 PF01042 Endoribonuclease L-PSP CYG28_RS07945 PF00270 DEAD/DEAH box helicase CYG28_RS07945 PF17191 RecG wedge domain CYG28_RS07945 PF00271 Helicase conserved C-terminal domain CYG28_RS07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS07950 PF03466 LysR substrate binding domain CYG28_RS07955 PF03466 LysR substrate binding domain CYG28_RS07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS07960 PF00171 Aldehyde dehydrogenase family CYG28_RS07965 PF00210 Ferritin-like domain CYG28_RS07985 PF00535 Glycosyl transferase family 2 CYG28_RS07995 PF00005 ABC transporter CYG28_RS08005 PF00534 Glycosyl transferases group 1 CYG28_RS08015 PF02563 Polysaccharide biosynthesis/export protein CYG28_RS08020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYG28_RS08020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYG28_RS08020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYG28_RS08025 PF01370 NAD dependent epimerase/dehydratase family CYG28_RS08030 PF05159 Capsule polysaccharide biosynthesis protein CYG28_RS08035 PF05159 Capsule polysaccharide biosynthesis protein CYG28_RS08045 PF00106 short chain dehydrogenase CYG28_RS08070 PF00005 ABC transporter CYG28_RS08075 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS08075 PF00005 ABC transporter CYG28_RS08090 PF03741 Integral membrane protein TerC family CYG28_RS08100 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS08115 PF17863 AAA lid domain CYG28_RS08115 PF07726 ATPase family associated with various cellular activities (AAA) CYG28_RS08150 PF00884 Sulfatase CYG28_RS08175 PF00072 Response regulator receiver domain CYG28_RS08175 PF00196 Bacterial regulatory proteins, luxR family CYG28_RS08180 PF00082 Subtilase family CYG28_RS08180 PF03797 Autotransporter beta-domain CYG28_RS08180 PF12951 Passenger-associated-transport-repeat CYG28_RS08185 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CYG28_RS08195 PF02798 Glutathione S-transferase, N-terminal domain CYG28_RS08195 PF00043 Glutathione S-transferase, C-terminal domain CYG28_RS08200 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CYG28_RS08205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS08205 PF03466 LysR substrate binding domain CYG28_RS08210 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS08220 PF01070 FMN-dependent dehydrogenase CYG28_RS08225 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYG28_RS08240 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS08245 PF03466 LysR substrate binding domain CYG28_RS08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS08250 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS08275 PF03358 NADPH-dependent FMN reductase CYG28_RS08300 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS08310 PF03466 LysR substrate binding domain CYG28_RS08330 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CYG28_RS08330 PF00361 Proton-conducting membrane transporter CYG28_RS08330 PF13244 Domain of unknown function (DUF4040) CYG28_RS08330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYG28_RS08335 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYG28_RS08340 PF00361 Proton-conducting membrane transporter CYG28_RS08345 PF01899 Na+/H+ ion antiporter subunit CYG28_RS08350 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CYG28_RS08375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYG28_RS08380 PF17676 LD-carboxypeptidase C-terminal domain CYG28_RS08380 PF02016 LD-carboxypeptidase N-terminal domain CYG28_RS08385 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS08390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS08400 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS08405 PF00005 ABC transporter CYG28_RS08405 PF12848 ABC transporter CYG28_RS08410 PF00005 ABC transporter CYG28_RS08440 PF00175 Oxidoreductase NAD-binding domain CYG28_RS08440 PF00042 Globin CYG28_RS08440 PF00970 Oxidoreductase FAD-binding domain CYG28_RS08445 PF02082 Transcriptional regulator CYG28_RS08450 PF01266 FAD dependent oxidoreductase CYG28_RS08465 PF01571 Aminomethyltransferase folate-binding domain CYG28_RS08470 PF02618 YceG-like family CYG28_RS08475 PF02223 Thymidylate kinase CYG28_RS08480 PF12169 DNA polymerase III subunits gamma and tau domain III CYG28_RS08485 PF01026 TatD related DNase CYG28_RS08500 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS08510 PF00005 ABC transporter CYG28_RS08520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYG28_RS08520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYG28_RS08530 PF01546 Peptidase family M20/M25/M40 CYG28_RS08530 PF07687 Peptidase dimerisation domain CYG28_RS08535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS08535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS08535 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS08545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS08545 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG28_RS08555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG28_RS08555 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS08560 PF07729 FCD domain CYG28_RS08560 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS08600 PF01425 Amidase CYG28_RS08605 PF07286 Protein of unknown function (DUF1445) CYG28_RS08615 PF00072 Response regulator receiver domain CYG28_RS08615 PF01627 Hpt domain CYG28_RS08615 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS08615 PF00989 PAS fold CYG28_RS08615 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS08620 PF00196 Bacterial regulatory proteins, luxR family CYG28_RS08620 PF00072 Response regulator receiver domain CYG28_RS08625 PF13018 Extended Signal Peptide of Type V secretion system CYG28_RS08625 PF05860 haemagglutination activity domain CYG28_RS08625 PF05594 Haemagluttinin repeat CYG28_RS08625 PF13332 Hemagglutinin repeat CYG28_RS08630 PF16970 Type-1 fimbrial protein, A CYG28_RS08635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CYG28_RS08635 PF02753 Pili assembly chaperone PapD, C-terminal domain CYG28_RS08640 PF13954 PapC N-terminal domain CYG28_RS08640 PF13953 PapC C-terminal domain CYG28_RS08640 PF00577 Outer membrane usher protein CYG28_RS08645 PF00419 Fimbrial protein CYG28_RS08650 PF08479 POTRA domain, ShlB-type CYG28_RS08650 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CYG28_RS08650 PF17287 POTRA domain CYG28_RS08665 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS08700 PF05378 Hydantoinase/oxoprolinase N-terminal region CYG28_RS08700 PF01968 Hydantoinase/oxoprolinase CYG28_RS08715 PF00924 Mechanosensitive ion channel CYG28_RS08715 PF05552 Conserved TM helix CYG28_RS08725 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS08730 PF00588 SpoU rRNA Methylase family CYG28_RS08735 PF00459 Inositol monophosphatase family CYG28_RS08740 PF03741 Integral membrane protein TerC family CYG28_RS08740 PF03471 Transporter associated domain CYG28_RS08745 PF02673 Bacitracin resistance protein BacA CYG28_RS08750 PF00149 Calcineurin-like phosphoesterase CYG28_RS08755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYG28_RS08765 PF01406 tRNA synthetases class I (C) catalytic domain CYG28_RS08765 PF09190 DALR domain CYG28_RS08770 PF12833 Helix-turn-helix domain CYG28_RS08770 PF02805 Metal binding domain of Ada CYG28_RS08770 PF06029 AlkA N-terminal domain CYG28_RS08770 PF00730 HhH-GPD superfamily base excision DNA repair protein CYG28_RS08775 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CYG28_RS08785 PF01171 PP-loop family CYG28_RS08785 PF09179 TilS substrate binding domain CYG28_RS08790 PF00696 Amino acid kinase family CYG28_RS08790 PF13840 ACT domain CYG28_RS08790 PF01842 ACT domain CYG28_RS08815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG28_RS08815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG28_RS08820 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG28_RS08820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS08825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS08830 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS08835 PF00561 alpha/beta hydrolase fold CYG28_RS08840 PF03447 Homoserine dehydrogenase, NAD binding domain CYG28_RS08840 PF01958 Domain of unknown function DUF108 CYG28_RS08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS08855 PF03466 LysR substrate binding domain CYG28_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS08875 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS08880 PF00005 ABC transporter CYG28_RS08880 PF08402 TOBE domain CYG28_RS08890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS08890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYG28_RS08895 PF09339 IclR helix-turn-helix domain CYG28_RS08895 PF01614 Bacterial transcriptional regulator CYG28_RS08900 PF13380 CoA binding domain CYG28_RS08905 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS08910 PF01042 Endoribonuclease L-PSP CYG28_RS08935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYG28_RS08945 PF00535 Glycosyl transferase family 2 CYG28_RS08950 PF14883 Hypothetical glycosyl hydrolase family 13 CYG28_RS08950 PF01522 Polysaccharide deacetylase CYG28_RS08970 PF12802 MarR family CYG28_RS08975 PF00072 Response regulator receiver domain CYG28_RS08975 PF00196 Bacterial regulatory proteins, luxR family CYG28_RS08985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYG28_RS08985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYG28_RS08985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYG28_RS08985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYG28_RS08990 PF00342 Phosphoglucose isomerase CYG28_RS08995 PF00132 Bacterial transferase hexapeptide (six repeats) CYG28_RS09005 PF02146 Sir2 family CYG28_RS09010 PF00459 Inositol monophosphatase family CYG28_RS09015 PF00171 Aldehyde dehydrogenase family CYG28_RS09020 PF00202 Aminotransferase class-III CYG28_RS09035 PF13361 UvrD-like helicase C-terminal domain CYG28_RS09035 PF00580 UvrD/REP helicase N-terminal domain CYG28_RS09040 PF01544 CorA-like Mg2+ transporter protein CYG28_RS09050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS09055 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS09060 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS09060 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG28_RS09065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS09065 PF00005 ABC transporter CYG28_RS09070 PF01047 MarR family CYG28_RS09090 PF08479 POTRA domain, ShlB-type CYG28_RS09090 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CYG28_RS09095 PF00563 EAL domain CYG28_RS09095 PF00990 Diguanylate cyclase, GGDEF domain CYG28_RS09095 PF03707 Bacterial signalling protein N terminal repeat CYG28_RS09125 PF04972 BON domain CYG28_RS09125 PF13629 Pilus formation protein N terminal region CYG28_RS09125 PF00263 Bacterial type II and III secretion system protein CYG28_RS09165 PF00158 Sigma-54 interaction domain CYG28_RS09165 PF00072 Response regulator receiver domain CYG28_RS09165 PF02954 Bacterial regulatory protein, Fis family CYG28_RS09180 PF08281 Sigma-70, region 4 CYG28_RS09180 PF04542 Sigma-70 region 2 CYG28_RS09190 PF00034 Cytochrome c CYG28_RS09195 PF09285 Elongation factor P, C-terminal CYG28_RS09195 PF01132 Elongation factor P (EF-P) OB domain CYG28_RS09195 PF08207 Elongation factor P (EF-P) KOW-like domain CYG28_RS09210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CYG28_RS09215 PF00694 Aconitase C-terminal domain CYG28_RS09215 PF00330 Aconitase family (aconitate hydratase) CYG28_RS09225 PF00593 TonB dependent receptor CYG28_RS09225 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS09245 PF00691 OmpA family CYG28_RS09255 PF11791 Aconitate B N-terminal domain CYG28_RS09255 PF00330 Aconitase family (aconitate hydratase) CYG28_RS09255 PF06434 Aconitate hydratase 2 N-terminus CYG28_RS09280 PF00892 EamA-like transporter family CYG28_RS09285 PF01925 Sulfite exporter TauE/SafE CYG28_RS09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS09305 PF03466 LysR substrate binding domain CYG28_RS09310 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CYG28_RS09310 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CYG28_RS09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS09320 PF03466 LysR substrate binding domain CYG28_RS09365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYG28_RS09365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYG28_RS09370 PF01425 Amidase CYG28_RS09380 PF00171 Aldehyde dehydrogenase family CYG28_RS09395 PF09334 tRNA synthetases class I (M) CYG28_RS09395 PF13603 Leucyl-tRNA synthetase, Domain 2 CYG28_RS09395 PF00133 tRNA synthetases class I (I, L, M and V) CYG28_RS09395 PF08264 Anticodon-binding domain of tRNA CYG28_RS09400 PF07690 Major Facilitator Superfamily CYG28_RS09405 PF01047 MarR family CYG28_RS09430 PF00916 Sulfate permease family CYG28_RS09430 PF01740 STAS domain CYG28_RS09435 PF00471 Ribosomal protein L33 CYG28_RS09440 PF00830 Ribosomal L28 family CYG28_RS09445 PF07690 Major Facilitator Superfamily CYG28_RS09465 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS09470 PF00571 CBS domain CYG28_RS09470 PF00005 ABC transporter CYG28_RS09475 PF01361 Tautomerase enzyme CYG28_RS09480 PF02803 Thiolase, C-terminal domain CYG28_RS09480 PF00108 Thiolase, N-terminal domain CYG28_RS09490 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS09490 PF07729 FCD domain CYG28_RS09500 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS09510 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS09515 PF00080 Copper/zinc superoxide dismutase (SODC) CYG28_RS09530 PF00005 ABC transporter CYG28_RS09535 PF03459 TOBE domain CYG28_RS09535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS09555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYG28_RS09555 PF00529 HlyD membrane-fusion protein of T1SS CYG28_RS09560 PF00873 AcrB/AcrD/AcrF family CYG28_RS09570 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CYG28_RS09575 PF01648 4'-phosphopantetheinyl transferase superfamily CYG28_RS09580 PF00933 Glycosyl hydrolase family 3 N terminal domain CYG28_RS09585 PF02151 UvrB/uvrC motif CYG28_RS09585 PF08459 UvrC Helix-hairpin-helix N-terminal CYG28_RS09585 PF01541 GIY-YIG catalytic domain CYG28_RS09590 PF01066 CDP-alcohol phosphatidyltransferase CYG28_RS09600 PF14489 QueF-like protein CYG28_RS09600 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CYG28_RS09605 PF00463 Isocitrate lyase family CYG28_RS09630 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS09635 PF13458 Periplasmic binding protein CYG28_RS09640 PF00355 Rieske [2Fe-2S] domain CYG28_RS09640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYG28_RS09645 PF00866 Ring hydroxylating beta subunit CYG28_RS09650 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS09660 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG28_RS09665 PF02515 CoA-transferase family III CYG28_RS09670 PF07859 alpha/beta hydrolase fold CYG28_RS09675 PF14535 AMP-binding enzyme C-terminal domain CYG28_RS09675 PF00501 AMP-binding enzyme CYG28_RS09680 PF02803 Thiolase, C-terminal domain CYG28_RS09680 PF00108 Thiolase, N-terminal domain CYG28_RS09695 PF03466 LysR substrate binding domain CYG28_RS09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS09700 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS09725 PF01152 Bacterial-like globin CYG28_RS09770 PF01522 Polysaccharide deacetylase CYG28_RS09775 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS09805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG28_RS09805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS09830 PF03466 LysR substrate binding domain CYG28_RS09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS09840 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG28_RS09840 PF01799 [2Fe-2S] binding domain CYG28_RS09845 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG28_RS09855 PF06719 AraC-type transcriptional regulator N-terminus CYG28_RS09855 PF12833 Helix-turn-helix domain CYG28_RS09875 PF07690 Major Facilitator Superfamily CYG28_RS09905 PF00664 ABC transporter transmembrane region CYG28_RS09905 PF00005 ABC transporter CYG28_RS09915 PF02535 ZIP Zinc transporter CYG28_RS09930 PF01740 STAS domain CYG28_RS09930 PF00916 Sulfate permease family CYG28_RS09950 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYG28_RS09950 PF03625 Domain of unknown function DUF302 CYG28_RS09960 PF12833 Helix-turn-helix domain CYG28_RS09960 PF02805 Metal binding domain of Ada CYG28_RS09965 PF07237 Protein of unknown function (DUF1428) CYG28_RS09970 PF02567 Phenazine biosynthesis-like protein CYG28_RS09975 PF03466 LysR substrate binding domain CYG28_RS09975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS09980 PF04286 Protein of unknown function (DUF445) CYG28_RS09995 PF00171 Aldehyde dehydrogenase family CYG28_RS10000 PF02954 Bacterial regulatory protein, Fis family CYG28_RS10000 PF00158 Sigma-54 interaction domain CYG28_RS10000 PF01590 GAF domain CYG28_RS10020 PF03788 LrgA family CYG28_RS10025 PF13649 Methyltransferase domain CYG28_RS10035 PF00155 Aminotransferase class I and II CYG28_RS10040 PF00202 Aminotransferase class-III CYG28_RS10075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYG28_RS10075 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CYG28_RS10080 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CYG28_RS10080 PF12801 4Fe-4S binding domain CYG28_RS10080 PF13746 4Fe-4S dicluster domain CYG28_RS10105 PF00005 ABC transporter CYG28_RS10110 PF01061 ABC-2 type transporter CYG28_RS10115 PF01594 AI-2E family transporter CYG28_RS10150 PF00140 Sigma-70 factor, region 1.2 CYG28_RS10150 PF04546 Sigma-70, non-essential region CYG28_RS10150 PF03979 Sigma-70 factor, region 1.1 CYG28_RS10150 PF04542 Sigma-70 region 2 CYG28_RS10150 PF04539 Sigma-70 region 3 CYG28_RS10150 PF04545 Sigma-70, region 4 CYG28_RS10160 PF08278 DNA primase DnaG DnaB-binding CYG28_RS10160 PF01807 CHC2 zinc finger CYG28_RS10160 PF08275 DNA primase catalytic core, N-terminal domain CYG28_RS10160 PF10410 DnaB-helicase binding domain of primase CYG28_RS10165 PF01165 Ribosomal protein S21 CYG28_RS10170 PF00156 Phosphoribosyl transferase domain CYG28_RS10175 PF00709 Adenylosuccinate synthetase CYG28_RS10180 PF13393 Histidyl-tRNA synthetase CYG28_RS10185 PF01145 SPFH domain / Band 7 family CYG28_RS10190 PF12221 Bacterial membrane protein N terminal CYG28_RS10190 PF01145 SPFH domain / Band 7 family CYG28_RS10195 PF01926 50S ribosome-binding GTPase CYG28_RS10195 PF16360 GTP-binding GTPase Middle Region CYG28_RS10195 PF13167 GTP-binding GTPase N-terminal CYG28_RS10200 PF17209 Hfq protein CYG28_RS10205 PF00155 Aminotransferase class I and II CYG28_RS10210 PF01926 50S ribosome-binding GTPase CYG28_RS10210 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CYG28_RS10215 PF13360 PQQ-like domain CYG28_RS10220 PF09976 Tetratricopeptide repeat-like domain CYG28_RS10225 PF13393 Histidyl-tRNA synthetase CYG28_RS10225 PF03129 Anticodon binding domain CYG28_RS10230 PF04551 GcpE protein CYG28_RS10240 PF04055 Radical SAM superfamily CYG28_RS10245 PF00334 Nucleoside diphosphate kinase CYG28_RS10250 PF08264 Anticodon-binding domain of tRNA CYG28_RS10250 PF10458 Valyl tRNA synthetase tRNA binding arm CYG28_RS10250 PF00133 tRNA synthetases class I (I, L, M and V) CYG28_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS10265 PF08521 Two-component sensor kinase N-terminal CYG28_RS10265 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS10290 PF00266 Aminotransferase class-V CYG28_RS10295 PF01746 tRNA (Guanine-1)-methyltransferase CYG28_RS10300 PF01782 RimM N-terminal domain CYG28_RS10305 PF00886 Ribosomal protein S16 CYG28_RS10315 PF01206 Sulfurtransferase TusA CYG28_RS10320 PF02272 DHHA1 domain CYG28_RS10320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYG28_RS10320 PF01411 tRNA synthetases class II (A) CYG28_RS10365 PF01425 Amidase CYG28_RS10370 PF00005 ABC transporter CYG28_RS10370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS10375 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS10380 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS10385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS10405 PF03466 LysR substrate binding domain CYG28_RS10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS10410 PF13416 Bacterial extracellular solute-binding protein CYG28_RS10415 PF01266 FAD dependent oxidoreductase CYG28_RS10420 PF00970 Oxidoreductase FAD-binding domain CYG28_RS10420 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG28_RS10420 PF00175 Oxidoreductase NAD-binding domain CYG28_RS10425 PF02261 Aspartate decarboxylase CYG28_RS10445 PF17042 Nucleotide-binding C-terminal domain CYG28_RS10445 PF07005 Sugar-binding N-terminal domain CYG28_RS10460 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS10470 PF02142 MGS-like domain CYG28_RS10475 PF04384 Iron-sulphur cluster assembly CYG28_RS10480 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG28_RS10485 PF00012 Hsp70 protein CYG28_RS10490 PF07743 HSCB C-terminal oligomerisation domain CYG28_RS10495 PF01521 Iron-sulphur cluster biosynthesis CYG28_RS10500 PF01592 NifU-like N terminal domain CYG28_RS10505 PF00266 Aminotransferase class-V CYG28_RS10510 PF02082 Transcriptional regulator CYG28_RS10515 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYG28_RS10520 PF17757 UvrB interaction domain CYG28_RS10520 PF12344 Ultra-violet resistance protein B CYG28_RS10520 PF02151 UvrB/uvrC motif CYG28_RS10520 PF00271 Helicase conserved C-terminal domain CYG28_RS10520 PF04851 Type III restriction enzyme, res subunit CYG28_RS10525 PF00155 Aminotransferase class I and II CYG28_RS10530 PF01726 LexA DNA binding domain CYG28_RS10530 PF00717 Peptidase S24-like CYG28_RS10555 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS10560 PF01144 Coenzyme A transferase CYG28_RS10565 PF01144 Coenzyme A transferase CYG28_RS10585 PF02803 Thiolase, C-terminal domain CYG28_RS10585 PF00108 Thiolase, N-terminal domain CYG28_RS10595 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS10600 PF01575 MaoC like domain CYG28_RS10605 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS10610 PF02515 CoA-transferase family III CYG28_RS10615 PF03466 LysR substrate binding domain CYG28_RS10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS10620 PF05362 Lon protease (S16) C-terminal proteolytic domain CYG28_RS10620 PF00004 ATPase family associated with various cellular activities (AAA) CYG28_RS10620 PF02190 ATP-dependent protease La (LON) substrate-binding domain CYG28_RS10625 PF06689 ClpX C4-type zinc finger CYG28_RS10625 PF10431 C-terminal, D2-small domain, of ClpB protein CYG28_RS10625 PF07724 AAA domain (Cdc48 subfamily) CYG28_RS10630 PF00574 Clp protease CYG28_RS10635 PF05697 Bacterial trigger factor protein (TF) CYG28_RS10635 PF05698 Bacterial trigger factor protein (TF) C-terminus CYG28_RS10635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYG28_RS10640 PF03350 Uncharacterized protein family, UPF0114 CYG28_RS10645 PF00313 'Cold-shock' DNA-binding domain CYG28_RS10655 PF00313 'Cold-shock' DNA-binding domain CYG28_RS10690 PF00132 Bacterial transferase hexapeptide (six repeats) CYG28_RS10690 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CYG28_RS10690 PF14602 Hexapeptide repeat of succinyl-transferase CYG28_RS10695 PF07687 Peptidase dimerisation domain CYG28_RS10695 PF01546 Peptidase family M20/M25/M40 CYG28_RS10700 PF05175 Methyltransferase small domain CYG28_RS10705 PF12848 ABC transporter CYG28_RS10705 PF00005 ABC transporter CYG28_RS10710 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS10715 PF13361 UvrD-like helicase C-terminal domain CYG28_RS10715 PF00580 UvrD/REP helicase N-terminal domain CYG28_RS10735 PF00551 Formyl transferase CYG28_RS10740 PF06574 FAD synthetase CYG28_RS10740 PF01687 Riboflavin kinase CYG28_RS10745 PF06827 Zinc finger found in FPG and IleRS CYG28_RS10745 PF00133 tRNA synthetases class I (I, L, M and V) CYG28_RS10745 PF08264 Anticodon-binding domain of tRNA CYG28_RS10750 PF01252 Signal peptidase (SPase) II CYG28_RS10755 PF04127 DNA / pantothenate metabolism flavoprotein CYG28_RS10755 PF02441 Flavoprotein CYG28_RS10765 PF01037 Lrp/AsnC ligand binding domain CYG28_RS10785 PF13406 Transglycosylase SLT domain CYG28_RS10790 PF04305 Protein of unknown function (DUF455) CYG28_RS10810 PF02875 Mur ligase family, glutamate ligase domain CYG28_RS10810 PF08245 Mur ligase middle domain CYG28_RS10810 PF08443 RimK-like ATP-grasp domain CYG28_RS10815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG28_RS10815 PF08245 Mur ligase middle domain CYG28_RS10815 PF02875 Mur ligase family, glutamate ligase domain CYG28_RS10820 PF05532 CsbD-like CYG28_RS10830 PF04972 BON domain CYG28_RS10845 PF00005 ABC transporter CYG28_RS10850 PF13472 GDSL-like Lipase/Acylhydrolase family CYG28_RS10855 PF13145 PPIC-type PPIASE domain CYG28_RS10860 PF03009 Glycerophosphoryl diester phosphodiesterase family CYG28_RS10865 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CYG28_RS10870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS10870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG28_RS10875 PF00462 Glutaredoxin CYG28_RS10875 PF08534 Redoxin CYG28_RS10885 PF09278 MerR, DNA binding CYG28_RS10885 PF00376 MerR family regulatory protein CYG28_RS10890 PF05958 tRNA (Uracil-5-)-methyltransferase CYG28_RS10910 PF01476 LysM domain CYG28_RS10910 PF01551 Peptidase family M23 CYG28_RS10920 PF01975 Survival protein SurE CYG28_RS10925 PF02660 Glycerol-3-phosphate acyltransferase CYG28_RS10935 PF00814 Glycoprotease family CYG28_RS10940 PF00860 Permease family CYG28_RS10950 PF00085 Thioredoxin CYG28_RS10955 PF01205 Uncharacterized protein family UPF0029 CYG28_RS10965 PF00583 Acetyltransferase (GNAT) family CYG28_RS10970 PF12802 MarR family CYG28_RS10980 PF00202 Aminotransferase class-III CYG28_RS10985 PF16868 NMT1-like family CYG28_RS11005 PF03797 Autotransporter beta-domain CYG28_RS11020 PF13396 Phospholipase_D-nuclease N-terminal CYG28_RS11020 PF13091 PLD-like domain CYG28_RS11025 PF01740 STAS domain CYG28_RS11030 PF13581 Histidine kinase-like ATPase domain CYG28_RS11035 PF01168 Alanine racemase, N-terminal domain CYG28_RS11035 PF00842 Alanine racemase, C-terminal domain CYG28_RS11045 PF07228 Stage II sporulation protein E (SpoIIE) CYG28_RS11045 PF00672 HAMP domain CYG28_RS11070 PF04542 Sigma-70 region 2 CYG28_RS11070 PF08281 Sigma-70, region 4 CYG28_RS11075 PF00263 Bacterial type II and III secretion system protein CYG28_RS11075 PF03958 Bacterial type II/III secretion system short domain CYG28_RS11085 PF01312 FlhB HrpN YscU SpaS Family CYG28_RS11090 PF01311 Bacterial export proteins, family 1 CYG28_RS11095 PF01313 Bacterial export proteins, family 3 CYG28_RS11100 PF00813 FliP family CYG28_RS11105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYG28_RS11120 PF18269 T3SS EscN ATPase C-terminal domain CYG28_RS11120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG28_RS11120 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYG28_RS11125 PF02108 Flagellar assembly protein FliH CYG28_RS11135 PF01514 Secretory protein of YscJ/FliF family CYG28_RS11200 PF00771 FHIPEP family CYG28_RS11230 PF01272 Transcription elongation factor, GreA/GreB, C-term CYG28_RS11230 PF03449 Transcription elongation factor, N-terminal CYG28_RS11235 PF02203 Tar ligand binding domain homologue CYG28_RS11235 PF00672 HAMP domain CYG28_RS11235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG28_RS11240 PF00860 Permease family CYG28_RS11270 PF13419 Haloacid dehalogenase-like hydrolase CYG28_RS11275 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS11280 PF08402 TOBE domain CYG28_RS11280 PF00005 ABC transporter CYG28_RS11285 PF03466 LysR substrate binding domain CYG28_RS11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS11295 PF00581 Rhodanese-like domain CYG28_RS11305 PF01435 Peptidase family M48 CYG28_RS11310 PF08240 Alcohol dehydrogenase GroES-like domain CYG28_RS11310 PF00107 Zinc-binding dehydrogenase CYG28_RS11315 PF00892 EamA-like transporter family CYG28_RS11325 PF01047 MarR family CYG28_RS11335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYG28_RS11335 PF00529 HlyD membrane-fusion protein of T1SS CYG28_RS11340 PF07690 Major Facilitator Superfamily CYG28_RS11345 PF00180 Isocitrate/isopropylmalate dehydrogenase CYG28_RS11350 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS11350 PF00155 Aminotransferase class I and II CYG28_RS11355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS11360 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS11365 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG28_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS11370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS11370 PF00005 ABC transporter CYG28_RS11380 PF00202 Aminotransferase class-III CYG28_RS11385 PF07883 Cupin domain CYG28_RS11390 PF00850 Histone deacetylase domain CYG28_RS11395 PF01546 Peptidase family M20/M25/M40 CYG28_RS11395 PF07687 Peptidase dimerisation domain CYG28_RS11405 PF00171 Aldehyde dehydrogenase family CYG28_RS11410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG28_RS11415 PF00202 Aminotransferase class-III CYG28_RS11420 PF01235 Sodium:alanine symporter family CYG28_RS11425 PF05872 Bacterial protein of unknown function (DUF853) CYG28_RS11430 PF01709 Transcriptional regulator CYG28_RS11435 PF02844 Phosphoribosylglycinamide synthetase, N domain CYG28_RS11435 PF02843 Phosphoribosylglycinamide synthetase, C domain CYG28_RS11435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYG28_RS11440 PF01218 Coproporphyrinogen III oxidase CYG28_RS11445 PF01467 Cytidylyltransferase-like CYG28_RS11455 PF02590 Predicted SPOUT methyltransferase CYG28_RS11460 PF02545 Maf-like protein CYG28_RS11465 PF03212 Pertactin CYG28_RS11465 PF03797 Autotransporter beta-domain CYG28_RS11505 PF00575 S1 RNA binding domain CYG28_RS11505 PF10150 Ribonuclease E/G family CYG28_RS11510 PF01842 ACT domain CYG28_RS11510 PF00800 Prephenate dehydratase CYG28_RS11520 PF07690 Major Facilitator Superfamily CYG28_RS11525 PF00005 ABC transporter CYG28_RS11525 PF00664 ABC transporter transmembrane region CYG28_RS11530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CYG28_RS11540 PF03692 Putative zinc- or iron-chelating domain CYG28_RS11555 PF00884 Sulfatase CYG28_RS11560 PF00534 Glycosyl transferases group 1 CYG28_RS11560 PF13439 Glycosyltransferase Family 4 CYG28_RS11565 PF00535 Glycosyl transferase family 2 CYG28_RS11570 PF01522 Polysaccharide deacetylase CYG28_RS11575 PF13439 Glycosyltransferase Family 4 CYG28_RS11575 PF00534 Glycosyl transferases group 1 CYG28_RS11580 PF14579 Helix-hairpin-helix motif CYG28_RS11580 PF02811 PHP domain CYG28_RS11580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYG28_RS11580 PF01336 OB-fold nucleic acid binding domain CYG28_RS11580 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYG28_RS11590 PF00270 DEAD/DEAH box helicase CYG28_RS11590 PF11898 Domain of unknown function (DUF3418) CYG28_RS11590 PF04408 Helicase associated domain (HA2) CYG28_RS11590 PF00271 Helicase conserved C-terminal domain CYG28_RS11590 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CYG28_RS11595 PF00583 Acetyltransferase (GNAT) family CYG28_RS11595 PF00696 Amino acid kinase family CYG28_RS11600 PF04362 Bacterial Fe(2+) trafficking CYG28_RS11605 PF05506 Domain of unknown function (DUF756) CYG28_RS11605 PF04185 Phosphoesterase family CYG28_RS11610 PF01895 PhoU domain CYG28_RS11615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CYG28_RS11620 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS11620 PF18158 Adaptive response protein AidB N-terminal domain CYG28_RS11620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS11625 PF02646 RmuC family CYG28_RS11635 PF02245 Methylpurine-DNA glycosylase (MPG) CYG28_RS11645 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS11655 PF08402 TOBE domain CYG28_RS11655 PF00005 ABC transporter CYG28_RS11660 PF13416 Bacterial extracellular solute-binding protein CYG28_RS11680 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS11690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS11690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CYG28_RS11705 PF00285 Citrate synthase, C-terminal domain CYG28_RS11710 PF03937 Flavinator of succinate dehydrogenase CYG28_RS11715 PF13085 2Fe-2S iron-sulfur cluster binding domain CYG28_RS11720 PF02910 Fumarate reductase flavoprotein C-term CYG28_RS11720 PF00890 FAD binding domain CYG28_RS11725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CYG28_RS11730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CYG28_RS11735 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS11735 PF07702 UTRA domain CYG28_RS11740 PF00056 lactate/malate dehydrogenase, NAD binding domain CYG28_RS11740 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYG28_RS11750 PF00285 Citrate synthase, C-terminal domain CYG28_RS11755 PF00330 Aconitase family (aconitate hydratase) CYG28_RS11755 PF00694 Aconitase C-terminal domain CYG28_RS11760 PF04303 PrpF protein CYG28_RS11765 PF03972 MmgE/PrpD family CYG28_RS11770 PF03653 Uncharacterised protein family (UPF0093) CYG28_RS11775 PF01170 Putative RNA methylase family UPF0020 CYG28_RS11775 PF02926 THUMP domain CYG28_RS11795 PF16177 Acetyl-coenzyme A synthetase N-terminus CYG28_RS11795 PF00501 AMP-binding enzyme CYG28_RS11795 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS11805 PF01430 Hsp33 protein CYG28_RS11830 PF00211 Adenylate and Guanylate cyclase catalytic domain CYG28_RS11835 PF04977 Septum formation initiator CYG28_RS11840 PF03952 Enolase, N-terminal domain CYG28_RS11840 PF00113 Enolase, C-terminal TIM barrel domain CYG28_RS11850 PF00793 DAHP synthetase I family CYG28_RS11855 PF00117 Glutamine amidotransferase class-I CYG28_RS11855 PF06418 CTP synthase N-terminus CYG28_RS11865 PF00557 Metallopeptidase family M24 CYG28_RS11865 PF01321 Creatinase/Prolidase N-terminal domain CYG28_RS11875 PF03576 Peptidase family S58 CYG28_RS11880 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS11880 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG28_RS11885 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS11890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS11895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS11895 PF00005 ABC transporter CYG28_RS11900 PF01112 Asparaginase CYG28_RS11910 PF01144 Coenzyme A transferase CYG28_RS11930 PF16363 GDP-mannose 4,6 dehydratase CYG28_RS11945 PF01212 Beta-eliminating lyase CYG28_RS11950 PF00892 EamA-like transporter family CYG28_RS11955 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS11955 PF16177 Acetyl-coenzyme A synthetase N-terminus CYG28_RS11955 PF00501 AMP-binding enzyme CYG28_RS11965 PF03928 Haem-degrading CYG28_RS11975 PF00877 NlpC/P60 family CYG28_RS12000 PF03466 LysR substrate binding domain CYG28_RS12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS12005 PF00171 Aldehyde dehydrogenase family CYG28_RS12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS12015 PF03466 LysR substrate binding domain CYG28_RS12025 PF00883 Cytosol aminopeptidase family, catalytic domain CYG28_RS12025 PF02789 Cytosol aminopeptidase family, N-terminal domain CYG28_RS12030 PF04364 DNA polymerase III chi subunit, HolC CYG28_RS12040 PF01027 Inhibitor of apoptosis-promoting Bax1 CYG28_RS12045 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS12060 PF00291 Pyridoxal-phosphate dependent enzyme CYG28_RS12070 PF11967 Recombination protein O N terminal CYG28_RS12070 PF02565 Recombination protein O C terminal CYG28_RS12075 PF07650 KH domain CYG28_RS12075 PF01926 50S ribosome-binding GTPase CYG28_RS12080 PF00035 Double-stranded RNA binding motif CYG28_RS12080 PF14622 Ribonuclease-III-like CYG28_RS12085 PF10502 Signal peptidase, peptidase S26 CYG28_RS12090 PF06421 GTP-binding protein LepA C-terminus CYG28_RS12090 PF00679 Elongation factor G C-terminus CYG28_RS12090 PF00009 Elongation factor Tu GTP binding domain CYG28_RS12090 PF03144 Elongation factor Tu domain 2 CYG28_RS12095 PF13180 PDZ domain CYG28_RS12110 PF08281 Sigma-70, region 4 CYG28_RS12110 PF04542 Sigma-70 region 2 CYG28_RS12120 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG28_RS12120 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG28_RS12125 PF00550 Phosphopantetheine attachment site CYG28_RS12135 PF00698 Acyl transferase domain CYG28_RS12140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYG28_RS12140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYG28_RS12145 PF02504 Fatty acid synthesis protein CYG28_RS12150 PF01783 Ribosomal L32p protein family CYG28_RS12155 PF02620 Large ribosomal RNA subunit accumulation protein YceD CYG28_RS12160 PF02545 Maf-like protein CYG28_RS12170 PF01510 N-acetylmuramoyl-L-alanine amidase CYG28_RS12190 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CYG28_RS12195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS12205 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS12210 PF01416 tRNA pseudouridine synthase CYG28_RS12220 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYG28_RS12220 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYG28_RS12225 PF00180 Isocitrate/isopropylmalate dehydrogenase CYG28_RS12230 PF00694 Aconitase C-terminal domain CYG28_RS12235 PF00330 Aconitase family (aconitate hydratase) CYG28_RS12240 PF12849 PBP superfamily domain CYG28_RS12245 PF00005 ABC transporter CYG28_RS12280 PF00384 Molybdopterin oxidoreductase CYG28_RS12280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CYG28_RS12280 PF01568 Molydopterin dinucleotide binding domain CYG28_RS12310 PF10609 NUBPL iron-transfer P-loop NTPase CYG28_RS12315 PF12804 MobA-like NTP transferase domain CYG28_RS12320 PF03454 MoeA C-terminal region (domain IV) CYG28_RS12320 PF00994 Probable molybdopterin binding domain CYG28_RS12320 PF03453 MoeA N-terminal region (domain I and II) CYG28_RS12325 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CYG28_RS12330 PF01435 Peptidase family M48 CYG28_RS12335 PF01264 Chorismate synthase CYG28_RS12340 PF08448 PAS fold CYG28_RS12340 PF00990 Diguanylate cyclase, GGDEF domain CYG28_RS12340 PF08447 PAS fold CYG28_RS12340 PF00563 EAL domain CYG28_RS12355 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS12360 PF08402 TOBE domain CYG28_RS12360 PF00005 ABC transporter CYG28_RS12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS12365 PF03466 LysR substrate binding domain CYG28_RS12370 PF00300 Histidine phosphatase superfamily (branch 1) CYG28_RS12380 PF02142 MGS-like domain CYG28_RS12380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYG28_RS12380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG28_RS12385 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CYG28_RS12385 PF00117 Glutamine amidotransferase class-I CYG28_RS12390 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYG28_RS12420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYG28_RS12420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG28_RS12425 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS12430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS12430 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS12430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS12435 PF03658 RnfH family Ubiquitin CYG28_RS12440 PF03364 Polyketide cyclase / dehydrase and lipid transport CYG28_RS12450 PF01668 SmpB protein CYG28_RS12455 PF00990 Diguanylate cyclase, GGDEF domain CYG28_RS12455 PF08448 PAS fold CYG28_RS12460 PF01145 SPFH domain / Band 7 family CYG28_RS12460 PF16200 C-terminal region of band_7 CYG28_RS12475 PF00958 GMP synthase C terminal domain CYG28_RS12475 PF00117 Glutamine amidotransferase class-I CYG28_RS12480 PF00391 PEP-utilising enzyme, mobile domain CYG28_RS12480 PF02896 PEP-utilising enzyme, TIM barrel domain CYG28_RS12480 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CYG28_RS12485 PF03618 Kinase/pyrophosphorylase CYG28_RS12490 PF00588 SpoU rRNA Methylase family CYG28_RS12490 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYG28_RS12495 PF01351 Ribonuclease HII CYG28_RS12500 PF02684 Lipid-A-disaccharide synthetase CYG28_RS12505 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CYG28_RS12505 PF00132 Bacterial transferase hexapeptide (six repeats) CYG28_RS12510 PF07977 FabA-like domain CYG28_RS12515 PF00132 Bacterial transferase hexapeptide (six repeats) CYG28_RS12515 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CYG28_RS12520 PF03938 Outer membrane protein (OmpH-like) CYG28_RS12525 PF07244 Surface antigen variable number repeat CYG28_RS12525 PF01103 Surface antigen CYG28_RS12530 PF02163 Peptidase family M50 CYG28_RS12530 PF17820 PDZ domain CYG28_RS12535 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYG28_RS12535 PF13288 DXP reductoisomerase C-terminal domain CYG28_RS12535 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CYG28_RS12545 PF01255 Putative undecaprenyl diphosphate synthase CYG28_RS12550 PF01765 Ribosome recycling factor CYG28_RS12555 PF00696 Amino acid kinase family CYG28_RS12560 PF00889 Elongation factor TS CYG28_RS12565 PF00318 Ribosomal protein S2 CYG28_RS12570 PF00557 Metallopeptidase family M24 CYG28_RS12575 PF01909 Nucleotidyltransferase domain CYG28_RS12575 PF01966 HD domain CYG28_RS12575 PF08335 GlnD PII-uridylyltransferase CYG28_RS12590 PF00156 Phosphoribosyl transferase domain CYG28_RS12605 PF08245 Mur ligase middle domain CYG28_RS12605 PF02875 Mur ligase family, glutamate ligase domain CYG28_RS12615 PF07196 Flagellin hook IN motif CYG28_RS12615 PF07195 Flagellar hook-associated protein 2 C-terminus CYG28_RS12615 PF02465 Flagellar hook-associated protein 2 N-terminus CYG28_RS12620 PF02561 Flagellar protein FliS CYG28_RS12645 PF01312 FlhB HrpN YscU SpaS Family CYG28_RS12655 PF02049 Flagellar hook-basal body complex protein FliE CYG28_RS12660 PF08345 Flagellar M-ring protein C-terminal CYG28_RS12660 PF01514 Secretory protein of YscJ/FliF family CYG28_RS12665 PF14842 FliG N-terminal domain CYG28_RS12665 PF01706 FliG C-terminal domain CYG28_RS12665 PF14841 FliG middle domain CYG28_RS12675 PF18269 T3SS EscN ATPase C-terminal domain CYG28_RS12675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG28_RS12700 PF03748 Flagellar basal body-associated protein FliL CYG28_RS12705 PF02154 Flagellar motor switch protein FliM CYG28_RS12705 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYG28_RS12710 PF16973 Flagellar motor switch protein FliN N-terminal CYG28_RS12710 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CYG28_RS12715 PF04347 Flagellar biosynthesis protein, FliO CYG28_RS12720 PF00813 FliP family CYG28_RS12725 PF01313 Bacterial export proteins, family 3 CYG28_RS12730 PF01311 Bacterial export proteins, family 1 CYG28_RS12740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG28_RS12740 PF08447 PAS fold CYG28_RS12745 PF02203 Tar ligand binding domain homologue CYG28_RS12745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG28_RS12745 PF00672 HAMP domain CYG28_RS12750 PF00672 HAMP domain CYG28_RS12750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG28_RS12750 PF02203 Tar ligand binding domain homologue CYG28_RS12755 PF00669 Bacterial flagellin N-terminal helical region CYG28_RS12760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG28_RS12760 PF00460 Flagella basal body rod protein CYG28_RS12765 PF10135 Rod binding protein CYG28_RS12765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CYG28_RS12770 PF02119 Flagellar P-ring protein CYG28_RS12775 PF02107 Flagellar L-ring protein CYG28_RS12780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG28_RS12780 PF00460 Flagella basal body rod protein CYG28_RS12785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG28_RS12785 PF00460 Flagella basal body rod protein CYG28_RS12790 PF07559 Flagellar basal body protein FlaE CYG28_RS12790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG28_RS12790 PF00460 Flagella basal body rod protein CYG28_RS12795 PF13861 FlgD Tudor-like domain CYG28_RS12795 PF03963 Flagellar hook capping protein - N-terminal region CYG28_RS12795 PF13860 FlgD Ig-like domain CYG28_RS12800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CYG28_RS12800 PF00460 Flagella basal body rod protein CYG28_RS12805 PF00460 Flagella basal body rod protein CYG28_RS12815 PF04316 Anti-sigma-28 factor, FlgM CYG28_RS12835 PF01312 FlhB HrpN YscU SpaS Family CYG28_RS12845 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS12855 PF00005 ABC transporter CYG28_RS12865 PF02558 Ketopantoate reductase PanE/ApbA CYG28_RS12865 PF08546 Ketopantoate reductase PanE/ApbA C terminal CYG28_RS12870 PF13378 Enolase C-terminal domain-like CYG28_RS12875 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS12885 PF00694 Aconitase C-terminal domain CYG28_RS12890 PF00356 Bacterial regulatory proteins, lacI family CYG28_RS12895 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS12900 PF02515 CoA-transferase family III CYG28_RS12910 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS12915 PF13380 CoA binding domain CYG28_RS12915 PF13607 Succinyl-CoA ligase like flavodoxin domain CYG28_RS12920 PF07729 FCD domain CYG28_RS12920 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS12925 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG28_RS12935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS12935 PF03466 LysR substrate binding domain CYG28_RS12945 PF12951 Passenger-associated-transport-repeat CYG28_RS12955 PF03551 Transcriptional regulator PadR-like family CYG28_RS12965 PF03372 Endonuclease/Exonuclease/phosphatase family CYG28_RS12970 PF13091 PLD-like domain CYG28_RS13015 PF00128 Alpha amylase, catalytic domain CYG28_RS13015 PF16657 Maltogenic Amylase, C-terminal domain CYG28_RS13020 PF00128 Alpha amylase, catalytic domain CYG28_RS13020 PF02806 Alpha amylase, C-terminal all-beta domain CYG28_RS13020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG28_RS13025 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG28_RS13025 PF00128 Alpha amylase, catalytic domain CYG28_RS13030 PF00128 Alpha amylase, catalytic domain CYG28_RS13030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG28_RS13030 PF11941 Domain of unknown function (DUF3459) CYG28_RS13040 PF00128 Alpha amylase, catalytic domain CYG28_RS13050 PF08543 Phosphomethylpyrimidine kinase CYG28_RS13055 PF01168 Alanine racemase, N-terminal domain CYG28_RS13060 PF00155 Aminotransferase class I and II CYG28_RS13060 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS13075 PF00582 Universal stress protein family CYG28_RS13080 PF00248 Aldo/keto reductase family CYG28_RS13095 PF07681 DoxX CYG28_RS13115 PF00578 AhpC/TSA family CYG28_RS13120 PF03960 ArsC family CYG28_RS13125 PF02515 CoA-transferase family III CYG28_RS13145 PF00255 Glutathione peroxidase CYG28_RS13150 PF02798 Glutathione S-transferase, N-terminal domain CYG28_RS13150 PF00043 Glutathione S-transferase, C-terminal domain CYG28_RS13165 PF03099 Biotin/lipoate A/B protein ligase family CYG28_RS13165 PF10437 Bacterial lipoate protein ligase C-terminus CYG28_RS13180 PF02666 Phosphatidylserine decarboxylase CYG28_RS13185 PF01070 FMN-dependent dehydrogenase CYG28_RS13190 PF03180 NLPA lipoprotein CYG28_RS13195 PF08808 RES domain CYG28_RS13205 PF04241 Protein of unknown function (DUF423) CYG28_RS13225 PF13458 Periplasmic binding protein CYG28_RS13230 PF00005 ABC transporter CYG28_RS13230 PF17912 MalK OB fold domain CYG28_RS13235 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS13240 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS13245 PF13416 Bacterial extracellular solute-binding protein CYG28_RS13250 PF14748 Pyrroline-5-carboxylate reductase dimerisation CYG28_RS13250 PF03807 NADP oxidoreductase coenzyme F420-dependent CYG28_RS13255 PF02592 Putative vitamin uptake transporter CYG28_RS13270 PF13458 Periplasmic binding protein CYG28_RS13275 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS13280 PF11862 Domain of unknown function (DUF3382) CYG28_RS13280 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS13285 PF00005 ABC transporter CYG28_RS13285 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS13290 PF00005 ABC transporter CYG28_RS13295 PF01177 Asp/Glu/Hydantoin racemase CYG28_RS13320 PF04235 Protein of unknown function (DUF418) CYG28_RS13325 PF00521 DNA gyrase/topoisomerase IV, subunit A CYG28_RS13335 PF01751 Toprim domain CYG28_RS13335 PF00986 DNA gyrase B subunit, carboxyl terminus CYG28_RS13335 PF00204 DNA gyrase B CYG28_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS13340 PF00085 Thioredoxin CYG28_RS13345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG28_RS13345 PF07498 Rho termination factor, N-terminal domain CYG28_RS13345 PF07497 Rho termination factor, RNA-binding domain CYG28_RS13355 PF03710 Glutamate-ammonia ligase adenylyltransferase CYG28_RS13355 PF08335 GlnD PII-uridylyltransferase CYG28_RS13360 PF02677 Epoxyqueuosine reductase QueH CYG28_RS13365 PF03315 Serine dehydratase beta chain CYG28_RS13365 PF03313 Serine dehydratase alpha chain CYG28_RS13370 PF02690 Na+/Pi-cotransporter CYG28_RS13375 PF01738 Dienelactone hydrolase family CYG28_RS13385 PF00476 DNA polymerase family A CYG28_RS13385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYG28_RS13385 PF01367 5'-3' exonuclease, C-terminal SAM fold CYG28_RS13385 PF01612 3'-5' exonuclease CYG28_RS13390 PF03641 Possible lysine decarboxylase CYG28_RS13405 PF03144 Elongation factor Tu domain 2 CYG28_RS13405 PF00009 Elongation factor Tu GTP binding domain CYG28_RS13405 PF00679 Elongation factor G C-terminus CYG28_RS13410 PF01509 TruB family pseudouridylate synthase (N terminal domain) CYG28_RS13410 PF16198 tRNA pseudouridylate synthase B C-terminal domain CYG28_RS13415 PF02033 Ribosome-binding factor A CYG28_RS13420 PF04760 Translation initiation factor IF-2, N-terminal region CYG28_RS13420 PF08364 Bacterial translation initiation factor IF-2 associated region CYG28_RS13420 PF11987 Translation-initiation factor 2 CYG28_RS13420 PF00009 Elongation factor Tu GTP binding domain CYG28_RS13425 PF08529 NusA N-terminal domain CYG28_RS13425 PF13184 NusA-like KH domain CYG28_RS13430 PF17384 RimP C-terminal SH3 domain CYG28_RS13430 PF02576 RimP N-terminal domain CYG28_RS13435 PF00849 RNA pseudouridylate synthase CYG28_RS13435 PF01479 S4 domain CYG28_RS13440 PF04079 Segregation and condensation complex subunit ScpB CYG28_RS13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS13450 PF03466 LysR substrate binding domain CYG28_RS13455 PF00881 Nitroreductase family CYG28_RS13460 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYG28_RS13460 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYG28_RS13480 PF14497 Glutathione S-transferase, C-terminal domain CYG28_RS13480 PF02798 Glutathione S-transferase, N-terminal domain CYG28_RS13485 PF02401 LytB protein CYG28_RS13490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYG28_RS13495 PF04002 RadC-like JAB domain CYG28_RS13500 PF04199 Putative cyclase CYG28_RS13505 PF03301 Tryptophan 2,3-dioxygenase CYG28_RS13510 PF01197 Ribosomal protein L31 CYG28_RS13520 PF01554 MatE CYG28_RS13535 PF18073 Rubredoxin metal binding domain CYG28_RS13540 PF00092 von Willebrand factor type A domain CYG28_RS13540 PF12034 Domain of unknown function (DUF3520) CYG28_RS13540 PF12450 von Willebrand factor CYG28_RS13545 PF04545 Sigma-70, region 4 CYG28_RS13545 PF04542 Sigma-70 region 2 CYG28_RS13565 PF00842 Alanine racemase, C-terminal domain CYG28_RS13565 PF01168 Alanine racemase, N-terminal domain CYG28_RS13580 PF01593 Flavin containing amine oxidoreductase CYG28_RS13580 PF01593 Flavin containing amine oxidoreductase CYG28_RS13585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYG28_RS13595 PF01061 ABC-2 type transporter CYG28_RS13600 PF00005 ABC transporter CYG28_RS13620 PF02424 ApbE family CYG28_RS13625 PF00175 Oxidoreductase NAD-binding domain CYG28_RS13625 PF00258 Flavodoxin CYG28_RS13625 PF00667 FAD binding domain CYG28_RS13635 PF07969 Amidohydrolase family CYG28_RS13640 PF03466 LysR substrate binding domain CYG28_RS13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS13650 PF09370 Phosphoenolpyruvate hydrolase-like CYG28_RS13665 PF03797 Autotransporter beta-domain CYG28_RS13665 PF03212 Pertactin CYG28_RS13685 PF00004 ATPase family associated with various cellular activities (AAA) CYG28_RS13685 PF07724 AAA domain (Cdc48 subfamily) CYG28_RS13685 PF10431 C-terminal, D2-small domain, of ClpB protein CYG28_RS13685 PF17871 AAA lid domain CYG28_RS13685 PF02861 Clp amino terminal domain, pathogenicity island component CYG28_RS13690 PF13545 Crp-like helix-turn-helix domain CYG28_RS13690 PF00027 Cyclic nucleotide-binding domain CYG28_RS13705 PF00293 NUDIX domain CYG28_RS13710 PF12843 Putative quorum-sensing-regulated virulence factor CYG28_RS13720 PF12680 SnoaL-like domain CYG28_RS13720 PF08281 Sigma-70, region 4 CYG28_RS13720 PF04542 Sigma-70 region 2 CYG28_RS13725 PF02627 Carboxymuconolactone decarboxylase family CYG28_RS13755 PF00155 Aminotransferase class I and II CYG28_RS13760 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS13765 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS13770 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS13775 PF00005 ABC transporter CYG28_RS13800 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CYG28_RS13825 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS13830 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYG28_RS13830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG28_RS13835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS13835 PF03466 LysR substrate binding domain CYG28_RS13845 PF17676 LD-carboxypeptidase C-terminal domain CYG28_RS13845 PF02016 LD-carboxypeptidase N-terminal domain CYG28_RS13860 PF07690 Major Facilitator Superfamily CYG28_RS13870 PF03466 LysR substrate binding domain CYG28_RS13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS13875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG28_RS13875 PF13378 Enolase C-terminal domain-like CYG28_RS13880 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS13900 PF02567 Phenazine biosynthesis-like protein CYG28_RS13910 PF03239 Iron permease FTR1 family CYG28_RS13920 PF10634 Fe2+ transport protein CYG28_RS13925 PF05233 PHB accumulation regulatory domain CYG28_RS13925 PF07879 PHB/PHA accumulation regulator DNA-binding domain CYG28_RS13930 PF00106 short chain dehydrogenase CYG28_RS13935 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CYG28_RS13940 PF02578 Multi-copper polyphenol oxidoreductase laccase CYG28_RS13945 PF01479 S4 domain CYG28_RS13945 PF00849 RNA pseudouridylate synthase CYG28_RS13950 PF13525 Outer membrane lipoprotein CYG28_RS13955 PF13307 Helicase C-terminal domain CYG28_RS13955 PF04851 Type III restriction enzyme, res subunit CYG28_RS13960 PF00575 S1 RNA binding domain CYG28_RS13960 PF17674 HHH domain CYG28_RS13960 PF09371 Tex-like protein N-terminal domain CYG28_RS13960 PF16921 Tex protein YqgF-like domain CYG28_RS13965 PF00579 tRNA synthetases class I (W and Y) CYG28_RS13990 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS14000 PF03466 LysR substrate binding domain CYG28_RS14000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS14010 PF03969 AFG1-like ATPase CYG28_RS14015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG28_RS14015 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS14020 PF02817 e3 binding domain CYG28_RS14020 PF00364 Biotin-requiring enzyme CYG28_RS14020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYG28_RS14025 PF02779 Transketolase, pyrimidine binding domain CYG28_RS14025 PF16078 2-oxoglutarate dehydrogenase N-terminus CYG28_RS14025 PF00676 Dehydrogenase E1 component CYG28_RS14025 PF16870 2-oxoglutarate dehydrogenase C-terminal CYG28_RS14035 PF01037 Lrp/AsnC ligand binding domain CYG28_RS14040 PF17831 Pyruvate dehydrogenase E1 component middle domain CYG28_RS14040 PF00456 Transketolase, thiamine diphosphate binding domain CYG28_RS14045 PF00390 Malic enzyme, N-terminal domain CYG28_RS14045 PF03949 Malic enzyme, NAD binding domain CYG28_RS14045 PF01515 Phosphate acetyl/butaryl transferase CYG28_RS14050 PF16970 Type-1 fimbrial protein, A CYG28_RS14065 PF01272 Transcription elongation factor, GreA/GreB, C-term CYG28_RS14065 PF03449 Transcription elongation factor, N-terminal CYG28_RS14070 PF02811 PHP domain CYG28_RS14080 PF03772 Competence protein CYG28_RS14080 PF13567 Domain of unknown function (DUF4131) CYG28_RS14080 PF00753 Metallo-beta-lactamase superfamily CYG28_RS14105 PF01026 TatD related DNase CYG28_RS14110 PF00005 ABC transporter CYG28_RS14115 PF02687 FtsX-like permease family CYG28_RS14115 PF12704 MacB-like periplasmic core domain CYG28_RS14125 PF01368 DHH family CYG28_RS14125 PF02272 DHHA1 domain CYG28_RS14125 PF17768 RecJ OB domain CYG28_RS14135 PF00106 short chain dehydrogenase CYG28_RS14140 PF00152 tRNA synthetases class II (D, K and N) CYG28_RS14140 PF01336 OB-fold nucleic acid binding domain CYG28_RS14150 PF17932 Tetracyclin repressor-like, C-terminal domain CYG28_RS14150 PF00440 Bacterial regulatory proteins, tetR family CYG28_RS14155 PF00501 AMP-binding enzyme CYG28_RS14160 PF00005 ABC transporter CYG28_RS14180 PF00005 ABC transporter CYG28_RS14180 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS14190 PF07689 KaiB domain CYG28_RS14190 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS14195 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS14195 PF00072 Response regulator receiver domain CYG28_RS14200 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CYG28_RS14210 PF03631 Virulence factor BrkB CYG28_RS14225 PF01207 Dihydrouridine synthase (Dus) CYG28_RS14230 PF01636 Phosphotransferase enzyme family CYG28_RS14255 PF01985 CRS1 / YhbY (CRM) domain CYG28_RS14260 PF01728 FtsJ-like methyltransferase CYG28_RS14265 PF06480 FtsH Extracellular CYG28_RS14265 PF01434 Peptidase family M41 CYG28_RS14265 PF17862 AAA+ lid domain CYG28_RS14265 PF00004 ATPase family associated with various cellular activities (AAA) CYG28_RS14270 PF00809 Pterin binding enzyme CYG28_RS14275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYG28_RS14275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYG28_RS14275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYG28_RS14275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYG28_RS14285 PF02541 Ppx/GppA phosphatase family CYG28_RS14290 PF13090 Polyphosphate kinase C-terminal domain 2 CYG28_RS14290 PF17941 Polyphosphate kinase C-terminal domain 1 CYG28_RS14290 PF13089 Polyphosphate kinase N-terminal domain CYG28_RS14290 PF02503 Polyphosphate kinase middle domain CYG28_RS14295 PF12849 PBP superfamily domain CYG28_RS14300 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS14305 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS14310 PF00005 ABC transporter CYG28_RS14325 PF01337 Barstar (barnase inhibitor) CYG28_RS14335 PF00390 Malic enzyme, N-terminal domain CYG28_RS14335 PF01515 Phosphate acetyl/butaryl transferase CYG28_RS14335 PF03949 Malic enzyme, NAD binding domain CYG28_RS14345 PF00155 Aminotransferase class I and II CYG28_RS14355 PF01464 Transglycosylase SLT domain CYG28_RS14355 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CYG28_RS14360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYG28_RS14385 PF10414 Sirohaem synthase dimerisation region CYG28_RS14385 PF14824 Sirohaem biosynthesis protein central CYG28_RS14385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG28_RS14390 PF03212 Pertactin CYG28_RS14390 PF03797 Autotransporter beta-domain CYG28_RS14405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CYG28_RS14410 PF02547 Queuosine biosynthesis protein CYG28_RS14415 PF01702 Queuine tRNA-ribosyltransferase CYG28_RS14420 PF02699 Preprotein translocase subunit CYG28_RS14425 PF07549 SecD/SecF GG Motif CYG28_RS14425 PF02355 Protein export membrane protein CYG28_RS14425 PF13721 SecD export protein N-terminal TM region CYG28_RS14430 PF07549 SecD/SecF GG Motif CYG28_RS14430 PF02355 Protein export membrane protein CYG28_RS14445 PF00919 Uncharacterized protein family UPF0004 CYG28_RS14445 PF01938 TRAM domain CYG28_RS14445 PF04055 Radical SAM superfamily CYG28_RS14450 PF02562 PhoH-like protein CYG28_RS14455 PF02130 Uncharacterized protein family UPF0054 CYG28_RS14460 PF00571 CBS domain CYG28_RS14460 PF03471 Transporter associated domain CYG28_RS14465 PF00795 Carbon-nitrogen hydrolase CYG28_RS14470 PF00248 Aldo/keto reductase family CYG28_RS14495 PF04344 Chemotaxis phosphatase, CheZ CYG28_RS14500 PF00072 Response regulator receiver domain CYG28_RS14505 PF01339 CheB methylesterase CYG28_RS14505 PF00072 Response regulator receiver domain CYG28_RS14515 PF00672 HAMP domain CYG28_RS14515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYG28_RS14515 PF02203 Tar ligand binding domain homologue CYG28_RS14520 PF01584 CheW-like domain CYG28_RS14525 PF01584 CheW-like domain CYG28_RS14525 PF09078 CheY binding CYG28_RS14525 PF02895 Signal transducing histidine kinase, homodimeric domain CYG28_RS14525 PF01627 Hpt domain CYG28_RS14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS14530 PF00072 Response regulator receiver domain CYG28_RS14535 PF13677 Membrane MotB of proton-channel complex MotA/MotB CYG28_RS14535 PF00691 OmpA family CYG28_RS14540 PF01618 MotA/TolQ/ExbB proton channel family CYG28_RS14545 PF05280 Flagellar transcriptional activator (FlhC) CYG28_RS14550 PF05247 Flagellar transcriptional activator (FlhD) CYG28_RS14555 PF04542 Sigma-70 region 2 CYG28_RS14555 PF04545 Sigma-70, region 4 CYG28_RS14555 PF04539 Sigma-70 region 3 CYG28_RS14565 PF01176 Translation initiation factor 1A / IF-1 CYG28_RS14575 PF01551 Peptidase family M23 CYG28_RS14575 PF01476 LysM domain CYG28_RS14575 PF08525 Opacity-associated protein A N-terminal motif CYG28_RS14585 PF00994 Probable molybdopterin binding domain CYG28_RS14595 PF03591 AzlC protein CYG28_RS14605 PF00226 DnaJ domain CYG28_RS14605 PF01556 DnaJ C terminal domain CYG28_RS14625 PF14834 Glutathione S-transferase, C-terminal domain CYG28_RS14625 PF02798 Glutathione S-transferase, N-terminal domain CYG28_RS14630 PF11339 Protein of unknown function (DUF3141) CYG28_RS14635 PF01515 Phosphate acetyl/butaryl transferase CYG28_RS14640 PF00871 Acetokinase family CYG28_RS14650 PF00162 Phosphoglycerate kinase CYG28_RS14655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYG28_RS14655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYG28_RS14660 PF00456 Transketolase, thiamine diphosphate binding domain CYG28_RS14660 PF02780 Transketolase, C-terminal domain CYG28_RS14660 PF02779 Transketolase, pyrimidine binding domain CYG28_RS14665 PF04452 RNA methyltransferase CYG28_RS14675 PF00700 Bacterial flagellin C-terminal helical region CYG28_RS14675 PF00669 Bacterial flagellin N-terminal helical region CYG28_RS14680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG28_RS14680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS14685 PF02817 e3 binding domain CYG28_RS14685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYG28_RS14685 PF00364 Biotin-requiring enzyme CYG28_RS14690 PF17831 Pyruvate dehydrogenase E1 component middle domain CYG28_RS14690 PF00456 Transketolase, thiamine diphosphate binding domain CYG28_RS14695 PF00989 PAS fold CYG28_RS14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS14695 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS14700 PF00196 Bacterial regulatory proteins, luxR family CYG28_RS14700 PF00072 Response regulator receiver domain CYG28_RS14705 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYG28_RS14705 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYG28_RS14710 PF01432 Peptidase family M3 CYG28_RS14715 PF02630 SCO1/SenC CYG28_RS14725 PF02321 Outer membrane efflux protein CYG28_RS14730 PF00873 AcrB/AcrD/AcrF family CYG28_RS14740 PF03466 LysR substrate binding domain CYG28_RS14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS14745 PF00849 RNA pseudouridylate synthase CYG28_RS14745 PF01479 S4 domain CYG28_RS14750 PF04345 Chorismate lyase CYG28_RS14765 PF00248 Aldo/keto reductase family CYG28_RS14775 PF00293 NUDIX domain CYG28_RS14780 PF01245 Ribosomal protein L19 CYG28_RS14795 PF04055 Radical SAM superfamily CYG28_RS14805 PF01507 Phosphoadenosine phosphosulfate reductase family CYG28_RS14815 PF00005 ABC transporter CYG28_RS14815 PF17850 CysA C-terminal regulatory domain CYG28_RS14815 PF12857 TOBE-like domain CYG28_RS14835 PF10417 C-terminal domain of 1-Cys peroxiredoxin CYG28_RS14835 PF00578 AhpC/TSA family CYG28_RS14840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS14840 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS14840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS14840 PF12806 Acetyl-CoA dehydrogenase C-terminal like CYG28_RS14845 PF01012 Electron transfer flavoprotein domain CYG28_RS14845 PF00766 Electron transfer flavoprotein FAD-binding domain CYG28_RS14850 PF01012 Electron transfer flavoprotein domain CYG28_RS14855 PF00850 Histone deacetylase domain CYG28_RS14860 PF13406 Transglycosylase SLT domain CYG28_RS14865 PF00291 Pyridoxal-phosphate dependent enzyme CYG28_RS14875 PF10531 SLBB domain CYG28_RS14880 PF01370 NAD dependent epimerase/dehydratase family CYG28_RS14885 PF00294 pfkB family carbohydrate kinase CYG28_RS14890 PF18073 Rubredoxin metal binding domain CYG28_RS14900 PF00216 Bacterial DNA-binding protein CYG28_RS14905 PF00575 S1 RNA binding domain CYG28_RS14910 PF02224 Cytidylate kinase CYG28_RS14915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYG28_RS14920 PF02153 Prephenate dehydrogenase CYG28_RS14925 PF01817 Chorismate mutase type II CYG28_RS14925 PF01842 ACT domain CYG28_RS14925 PF00800 Prephenate dehydratase CYG28_RS14930 PF00266 Aminotransferase class-V CYG28_RS14935 PF00521 DNA gyrase/topoisomerase IV, subunit A CYG28_RS14935 PF03989 DNA gyrase C-terminal domain, beta-propeller CYG28_RS14940 PF00691 OmpA family CYG28_RS14950 PF13419 Haloacid dehalogenase-like hydrolase CYG28_RS14955 PF07690 Major Facilitator Superfamily CYG28_RS14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS14990 PF03466 LysR substrate binding domain CYG28_RS14995 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS15005 PF11798 IMS family HHH motif CYG28_RS15005 PF00817 impB/mucB/samB family CYG28_RS15005 PF11799 impB/mucB/samB family C-terminal domain CYG28_RS15020 PF00326 Prolyl oligopeptidase family CYG28_RS15025 PF17092 Penicillin-binding protein OB-like domain CYG28_RS15025 PF00912 Transglycosylase CYG28_RS15025 PF00905 Penicillin binding protein transpeptidase domain CYG28_RS15030 PF00149 Calcineurin-like phosphoesterase CYG28_RS15045 PF00248 Aldo/keto reductase family CYG28_RS15050 PF00248 Aldo/keto reductase family CYG28_RS15055 PF00005 ABC transporter CYG28_RS15055 PF00664 ABC transporter transmembrane region CYG28_RS15105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG28_RS15105 PF00289 Biotin carboxylase, N-terminal domain CYG28_RS15105 PF02785 Biotin carboxylase C-terminal domain CYG28_RS15110 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS15110 PF07702 UTRA domain CYG28_RS15130 PF00364 Biotin-requiring enzyme CYG28_RS15130 PF00682 HMGL-like CYG28_RS15130 PF02436 Conserved carboxylase domain CYG28_RS15135 PF00364 Biotin-requiring enzyme CYG28_RS15145 PF01966 HD domain CYG28_RS15165 PF07317 Flagellar regulator YcgR CYG28_RS15165 PF07238 PilZ domain CYG28_RS15185 PF05724 Thiopurine S-methyltransferase (TPMT) CYG28_RS15190 PF00005 ABC transporter CYG28_RS15190 PF00664 ABC transporter transmembrane region CYG28_RS15205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS15205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS15205 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS15210 PF10369 Small subunit of acetolactate synthase CYG28_RS15215 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CYG28_RS15215 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CYG28_RS15220 PF01066 CDP-alcohol phosphatidyltransferase CYG28_RS15235 PF00312 Ribosomal protein S15 CYG28_RS15240 PF03725 3' exoribonuclease family, domain 2 CYG28_RS15240 PF00013 KH domain CYG28_RS15240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CYG28_RS15240 PF01138 3' exoribonuclease family, domain 1 CYG28_RS15240 PF00575 S1 RNA binding domain CYG28_RS15255 PF13291 ACT domain CYG28_RS15255 PF00291 Pyridoxal-phosphate dependent enzyme CYG28_RS15270 PF08990 Erythronolide synthase docking CYG28_RS15270 PF16197 Ketoacyl-synthetase C-terminal extension CYG28_RS15270 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG28_RS15270 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG28_RS15270 PF08659 KR domain CYG28_RS15270 PF00550 Phosphopantetheine attachment site CYG28_RS15270 PF14765 Polyketide synthase dehydratase CYG28_RS15270 PF08240 Alcohol dehydrogenase GroES-like domain CYG28_RS15270 PF00698 Acyl transferase domain CYG28_RS15275 PF00121 Triosephosphate isomerase CYG28_RS15280 PF03840 Preprotein translocase SecG subunit CYG28_RS15290 PF02028 BCCT, betaine/carnitine/choline family transporter CYG28_RS15300 PF05034 Methylaspartate ammonia-lyase N-terminus CYG28_RS15300 PF07476 Methylaspartate ammonia-lyase C-terminus CYG28_RS15305 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS15320 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS15335 PF03466 LysR substrate binding domain CYG28_RS15340 PF01053 Cys/Met metabolism PLP-dependent enzyme CYG28_RS15345 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CYG28_RS15360 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS15365 PF01266 FAD dependent oxidoreductase CYG28_RS15375 PF01968 Hydantoinase/oxoprolinase CYG28_RS15375 PF05378 Hydantoinase/oxoprolinase N-terminal region CYG28_RS15385 PF00127 Copper binding proteins, plastocyanin/azurin family CYG28_RS15395 PF02321 Outer membrane efflux protein CYG28_RS15400 PF00873 AcrB/AcrD/AcrF family CYG28_RS15405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYG28_RS15410 PF01638 HxlR-like helix-turn-helix CYG28_RS15420 PF02028 BCCT, betaine/carnitine/choline family transporter CYG28_RS15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS15425 PF03466 LysR substrate binding domain CYG28_RS15430 PF00781 Diacylglycerol kinase catalytic domain CYG28_RS15440 PF01569 PAP2 superfamily CYG28_RS15470 PF13609 Gram-negative porin CYG28_RS15475 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CYG28_RS15480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYG28_RS15485 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CYG28_RS15490 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CYG28_RS15500 PF10531 SLBB domain CYG28_RS15500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYG28_RS15500 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CYG28_RS15505 PF00384 Molybdopterin oxidoreductase CYG28_RS15505 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CYG28_RS15505 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CYG28_RS15510 PF00146 NADH dehydrogenase CYG28_RS15515 PF12838 4Fe-4S dicluster domain CYG28_RS15520 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CYG28_RS15525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYG28_RS15530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYG28_RS15530 PF00361 Proton-conducting membrane transporter CYG28_RS15535 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CYG28_RS15535 PF00361 Proton-conducting membrane transporter CYG28_RS15540 PF00361 Proton-conducting membrane transporter CYG28_RS15550 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS15550 PF00593 TonB dependent receptor CYG28_RS15555 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS15555 PF00593 TonB dependent receptor CYG28_RS15570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS15570 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS15570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS15575 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS15580 PF03466 LysR substrate binding domain CYG28_RS15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS15590 PF03461 TRCF domain CYG28_RS15590 PF00271 Helicase conserved C-terminal domain CYG28_RS15590 PF17757 UvrB interaction domain CYG28_RS15590 PF00270 DEAD/DEAH box helicase CYG28_RS15590 PF02559 CarD-like/TRCF domain CYG28_RS15595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CYG28_RS15600 PF02542 YgbB family CYG28_RS15615 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CYG28_RS15620 PF11940 Domain of unknown function (DUF3458) Ig-like fold CYG28_RS15620 PF01433 Peptidase family M1 domain CYG28_RS15620 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CYG28_RS15640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS15640 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS15640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS15650 PF09084 NMT1/THI5 like CYG28_RS15655 PF00005 ABC transporter CYG28_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS15670 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS15670 PF00501 AMP-binding enzyme CYG28_RS15675 PF08240 Alcohol dehydrogenase GroES-like domain CYG28_RS15675 PF00107 Zinc-binding dehydrogenase CYG28_RS15680 PF07729 FCD domain CYG28_RS15680 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS15690 PF07729 FCD domain CYG28_RS15690 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS15695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS15695 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS15695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS15715 PF01063 Amino-transferase class IV CYG28_RS15720 PF00005 ABC transporter CYG28_RS15725 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS15735 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS15740 PF03466 LysR substrate binding domain CYG28_RS15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS15745 PF02321 Outer membrane efflux protein CYG28_RS15750 PF13533 Biotin-lipoyl like CYG28_RS15755 PF00664 ABC transporter transmembrane region CYG28_RS15755 PF00005 ABC transporter CYG28_RS15755 PF03412 Peptidase C39 family CYG28_RS15760 PF02382 N-terminal domain in RTX protein CYG28_RS15760 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CYG28_RS15760 PF03497 Anthrax toxin LF subunit CYG28_RS15770 PF02794 RTX toxin acyltransferase family CYG28_RS15775 PF00171 Aldehyde dehydrogenase family CYG28_RS15780 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS15790 PF01266 FAD dependent oxidoreductase CYG28_RS15795 PF02538 Hydantoinase B/oxoprolinase CYG28_RS15800 PF01968 Hydantoinase/oxoprolinase CYG28_RS15800 PF05378 Hydantoinase/oxoprolinase N-terminal region CYG28_RS15805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS15805 PF03466 LysR substrate binding domain CYG28_RS15815 PF00348 Polyprenyl synthetase CYG28_RS15825 PF00829 Ribosomal prokaryotic L21 protein CYG28_RS15830 PF01016 Ribosomal L27 protein CYG28_RS15835 PF01926 50S ribosome-binding GTPase CYG28_RS15835 PF01018 GTP1/OBG CYG28_RS15840 PF00696 Amino acid kinase family CYG28_RS15840 PF01472 PUA domain CYG28_RS15885 PF16220 Domain of unknown function (DUF4880) CYG28_RS15885 PF04773 FecR protein CYG28_RS15890 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS15890 PF00593 TonB dependent receptor CYG28_RS15895 PF04264 YceI-like domain CYG28_RS15905 PF16653 Saccharopine dehydrogenase C-terminal domain CYG28_RS15905 PF03435 Saccharopine dehydrogenase NADP binding domain CYG28_RS15910 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYG28_RS15930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS15935 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS15940 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS15945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS15945 PF00005 ABC transporter CYG28_RS15950 PF01425 Amidase CYG28_RS15955 PF00202 Aminotransferase class-III CYG28_RS15980 PF01329 Pterin 4 alpha carbinolamine dehydratase CYG28_RS15990 PF00483 Nucleotidyl transferase CYG28_RS15995 PF01636 Phosphotransferase enzyme family CYG28_RS16000 PF04453 LPS transport system D CYG28_RS16005 PF00639 PPIC-type PPIASE domain CYG28_RS16005 PF09312 SurA N-terminal domain CYG28_RS16010 PF00398 Ribosomal RNA adenine dimethylase CYG28_RS16015 PF02595 Glycerate kinase family CYG28_RS16020 PF00224 Pyruvate kinase, barrel domain CYG28_RS16020 PF02887 Pyruvate kinase, alpha/beta domain CYG28_RS16025 PF07670 Nucleoside recognition CYG28_RS16050 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS16055 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS16060 PF00005 ABC transporter CYG28_RS16065 PF01032 FecCD transport family CYG28_RS16075 PF00691 OmpA family CYG28_RS16080 PF04052 TolB amino-terminal domain CYG28_RS16080 PF07676 WD40-like Beta Propeller Repeat CYG28_RS16090 PF02472 Biopolymer transport protein ExbD/TolR CYG28_RS16095 PF01618 MotA/TolQ/ExbB proton channel family CYG28_RS16100 PF03061 Thioesterase superfamily CYG28_RS16105 PF04073 Aminoacyl-tRNA editing domain CYG28_RS16105 PF03129 Anticodon binding domain CYG28_RS16105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG28_RS16110 PF00293 NUDIX domain CYG28_RS16115 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS16115 PF00072 Response regulator receiver domain CYG28_RS16125 PF02586 SOS response associated peptidase (SRAP) CYG28_RS16200 PF06791 Prophage tail length tape measure protein CYG28_RS16340 PF03180 NLPA lipoprotein CYG28_RS16350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CYG28_RS16350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CYG28_RS16355 PF00005 ABC transporter CYG28_RS16360 PF00005 ABC transporter CYG28_RS16360 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS16365 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS16370 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS16375 PF13458 Periplasmic binding protein CYG28_RS16380 PF01425 Amidase CYG28_RS16385 PF00484 Carbonic anhydrase CYG28_RS16400 PF00570 HRDC domain CYG28_RS16400 PF00271 Helicase conserved C-terminal domain CYG28_RS16400 PF09382 RQC domain CYG28_RS16400 PF16124 RecQ zinc-binding CYG28_RS16400 PF00270 DEAD/DEAH box helicase CYG28_RS16405 PF05496 Holliday junction DNA helicase RuvB P-loop domain CYG28_RS16405 PF05491 RuvB C-terminal winged helix domain CYG28_RS16405 PF17864 RuvB AAA lid domain CYG28_RS16410 PF00291 Pyridoxal-phosphate dependent enzyme CYG28_RS16415 PF01370 NAD dependent epimerase/dehydratase family CYG28_RS16420 PF07499 RuvA, C-terminal domain CYG28_RS16420 PF01330 RuvA N terminal domain CYG28_RS16425 PF02075 Crossover junction endodeoxyribonuclease RuvC CYG28_RS16430 PF01808 AICARFT/IMPCHase bienzyme CYG28_RS16430 PF02142 MGS-like domain CYG28_RS16435 PF02954 Bacterial regulatory protein, Fis family CYG28_RS16440 PF01207 Dihydrouridine synthase (Dus) CYG28_RS16445 PF01494 FAD binding domain CYG28_RS16455 PF00557 Metallopeptidase family M24 CYG28_RS16455 PF05195 Aminopeptidase P, N-terminal domain CYG28_RS16480 PF13609 Gram-negative porin CYG28_RS16490 PF00483 Nucleotidyl transferase CYG28_RS16495 PF13181 Tetratricopeptide repeat CYG28_RS16495 PF01435 Peptidase family M48 CYG28_RS16500 PF00561 alpha/beta hydrolase fold CYG28_RS16515 PF01063 Amino-transferase class IV CYG28_RS16530 PF00271 Helicase conserved C-terminal domain CYG28_RS16530 PF00270 DEAD/DEAH box helicase CYG28_RS16560 PF02464 Competence-damaged protein CYG28_RS16560 PF18146 Damage-inducible protein CinA KH domain CYG28_RS16560 PF00994 Probable molybdopterin binding domain CYG28_RS16565 PF01614 Bacterial transcriptional regulator CYG28_RS16565 PF09339 IclR helix-turn-helix domain CYG28_RS16570 PF05785 Rho-activating domain of cytotoxic necrotizing factor CYG28_RS16570 PF18807 Tripartite Tc toxins repeat CYG28_RS16575 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS16585 PF01180 Dihydroorotate dehydrogenase CYG28_RS16590 PF04377 Arginine-tRNA-protein transferase, C terminus CYG28_RS16590 PF04376 Arginine-tRNA-protein transferase, N terminus CYG28_RS16605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS16605 PF03466 LysR substrate binding domain CYG28_RS16645 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS16645 PF07729 FCD domain CYG28_RS16650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS16650 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS16650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS16655 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS16660 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CYG28_RS16665 PF01515 Phosphate acetyl/butaryl transferase CYG28_RS16665 PF03949 Malic enzyme, NAD binding domain CYG28_RS16665 PF00390 Malic enzyme, N-terminal domain CYG28_RS16675 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS16680 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS16685 PF00005 ABC transporter CYG28_RS16685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS16700 PF03466 LysR substrate binding domain CYG28_RS16715 PF01022 Bacterial regulatory protein, arsR family CYG28_RS16730 PF03594 Benzoate membrane transport protein CYG28_RS16735 PF00037 4Fe-4S binding domain CYG28_RS16740 PF01467 Cytidylyltransferase-like CYG28_RS16750 PF02881 SRP54-type protein, helical bundle domain CYG28_RS16750 PF00448 SRP54-type protein, GTPase domain CYG28_RS16760 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS16765 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS16800 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CYG28_RS16800 PF00925 GTP cyclohydrolase II CYG28_RS16805 PF00885 6,7-dimethyl-8-ribityllumazine synthase CYG28_RS16810 PF01029 NusB family CYG28_RS16815 PF02769 AIR synthase related protein, C-terminal domain CYG28_RS16815 PF00586 AIR synthase related protein, N-terminal domain CYG28_RS16820 PF04608 Phosphatidylglycerophosphatase A CYG28_RS16825 PF18146 Damage-inducible protein CinA KH domain CYG28_RS16825 PF02464 Competence-damaged protein CYG28_RS16825 PF00994 Probable molybdopterin binding domain CYG28_RS16830 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYG28_RS16835 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS16840 PF01219 Prokaryotic diacylglycerol kinase CYG28_RS16845 PF03631 Virulence factor BrkB CYG28_RS16850 PF03212 Pertactin CYG28_RS16850 PF03797 Autotransporter beta-domain CYG28_RS16855 PF00118 TCP-1/cpn60 chaperonin family CYG28_RS16860 PF00166 Chaperonin 10 Kd subunit CYG28_RS16880 PF00890 FAD binding domain CYG28_RS16895 PF03466 LysR substrate binding domain CYG28_RS16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS16900 PF00890 FAD binding domain CYG28_RS16925 PF00990 Diguanylate cyclase, GGDEF domain CYG28_RS16930 PF00072 Response regulator receiver domain CYG28_RS16965 PF10017 Histidine-specific methyltransferase, SAM-dependent CYG28_RS16975 PF13396 Phospholipase_D-nuclease N-terminal CYG28_RS16975 PF13091 PLD-like domain CYG28_RS16985 PF01645 Conserved region in glutamate synthase CYG28_RS16990 PF04143 Sulphur transport CYG28_RS16995 PF03547 Membrane transport protein CYG28_RS17000 PF13673 Acetyltransferase (GNAT) domain CYG28_RS17020 PF08461 Ribonuclease R winged-helix domain CYG28_RS17020 PF08206 Ribonuclease B OB domain CYG28_RS17020 PF00773 RNB domain CYG28_RS17020 PF00575 S1 RNA binding domain CYG28_RS17020 PF17876 Cold shock domain CYG28_RS17025 PF00588 SpoU rRNA Methylase family CYG28_RS17025 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYG28_RS17030 PF01053 Cys/Met metabolism PLP-dependent enzyme CYG28_RS17035 PF13640 2OG-Fe(II) oxygenase superfamily CYG28_RS17035 PF18331 PKHD-type hydroxylase C-terminal domain CYG28_RS17040 PF00216 Bacterial DNA-binding protein CYG28_RS17055 PF01618 MotA/TolQ/ExbB proton channel family CYG28_RS17060 PF02472 Biopolymer transport protein ExbD/TolR CYG28_RS17065 PF00072 Response regulator receiver domain CYG28_RS17065 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS17070 PF08521 Two-component sensor kinase N-terminal CYG28_RS17070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS17070 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS17075 PF02705 K+ potassium transporter CYG28_RS17080 PF00764 Arginosuccinate synthase CYG28_RS17085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYG28_RS17085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYG28_RS17090 PF00202 Aminotransferase class-III CYG28_RS17100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS17100 PF03466 LysR substrate binding domain CYG28_RS17110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG28_RS17110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG28_RS17115 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS17130 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS17130 PF07729 FCD domain CYG28_RS17140 PF07690 Major Facilitator Superfamily CYG28_RS17150 PF02627 Carboxymuconolactone decarboxylase family CYG28_RS17155 PF00578 AhpC/TSA family CYG28_RS17160 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS17160 PF00672 HAMP domain CYG28_RS17170 PF00072 Response regulator receiver domain CYG28_RS17170 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS17175 PF00814 Glycoprotease family CYG28_RS17180 PF03167 Uracil DNA glycosylase superfamily CYG28_RS17185 PF07690 Major Facilitator Superfamily CYG28_RS17190 PF02463 RecF/RecN/SMC N terminal domain CYG28_RS17190 PF06470 SMC proteins Flexible Hinge Domain CYG28_RS17200 PF03120 NAD-dependent DNA ligase OB-fold domain CYG28_RS17200 PF12826 Helix-hairpin-helix motif CYG28_RS17200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CYG28_RS17200 PF00533 BRCA1 C Terminus (BRCT) domain CYG28_RS17200 PF01653 NAD-dependent DNA ligase adenylation domain CYG28_RS17215 PF04279 Intracellular septation protein A CYG28_RS17220 PF01641 SelR domain CYG28_RS17225 PF00005 ABC transporter CYG28_RS17230 PF02361 Cobalt transport protein CYG28_RS17235 PF02632 BioY family CYG28_RS17250 PF00005 ABC transporter CYG28_RS17250 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS17255 PF01063 Amino-transferase class IV CYG28_RS17270 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS17280 PF00005 ABC transporter CYG28_RS17285 PF00005 ABC transporter CYG28_RS17285 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS17290 PF10576 Iron-sulfur binding domain of endonuclease III CYG28_RS17290 PF00730 HhH-GPD superfamily base excision DNA repair protein CYG28_RS17290 PF00633 Helix-hairpin-helix motif CYG28_RS17295 PF04060 Putative Fe-S cluster CYG28_RS17305 PF00970 Oxidoreductase FAD-binding domain CYG28_RS17305 PF00175 Oxidoreductase NAD-binding domain CYG28_RS17310 PF00037 4Fe-4S binding domain CYG28_RS17310 PF11953 Domain of unknown function (DUF3470) CYG28_RS17315 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CYG28_RS17315 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CYG28_RS17320 PF01042 Endoribonuclease L-PSP CYG28_RS17330 PF06167 Glucose-regulated metallo-peptidase M90 CYG28_RS17335 PF02824 TGS domain CYG28_RS17335 PF04607 Region found in RelA / SpoT proteins CYG28_RS17335 PF13291 ACT domain CYG28_RS17340 PF01546 Peptidase family M20/M25/M40 CYG28_RS17340 PF07687 Peptidase dimerisation domain CYG28_RS17345 PF00291 Pyridoxal-phosphate dependent enzyme CYG28_RS17350 PF00290 Tryptophan synthase alpha chain CYG28_RS17355 PF17848 Acetyl-coA carboxylase zinc finger domain CYG28_RS17355 PF01039 Carboxyl transferase domain CYG28_RS17375 PF00575 S1 RNA binding domain CYG28_RS17375 PF10150 Ribonuclease E/G family CYG28_RS17375 PF12111 Polyribonucleotide phosphorylase C terminal CYG28_RS17380 PF01479 S4 domain CYG28_RS17380 PF00849 RNA pseudouridylate synthase CYG28_RS17385 PF13419 Haloacid dehalogenase-like hydrolase CYG28_RS17390 PF00174 Oxidoreductase molybdopterin binding domain CYG28_RS17395 PF01794 Ferric reductase like transmembrane component CYG28_RS17410 PF02515 CoA-transferase family III CYG28_RS17415 PF03466 LysR substrate binding domain CYG28_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS17425 PF02515 CoA-transferase family III CYG28_RS17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS17440 PF03466 LysR substrate binding domain CYG28_RS17445 PF01042 Endoribonuclease L-PSP CYG28_RS17450 PF00175 Oxidoreductase NAD-binding domain CYG28_RS17450 PF00042 Globin CYG28_RS17450 PF00970 Oxidoreductase FAD-binding domain CYG28_RS17455 PF02667 Short chain fatty acid transporter CYG28_RS17460 PF00171 Aldehyde dehydrogenase family CYG28_RS17465 PF07729 FCD domain CYG28_RS17465 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS17475 PF00313 'Cold-shock' DNA-binding domain CYG28_RS17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS17480 PF03466 LysR substrate binding domain CYG28_RS17505 PF00108 Thiolase, N-terminal domain CYG28_RS17505 PF02803 Thiolase, C-terminal domain CYG28_RS17515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS17515 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS17515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS17520 PF03466 LysR substrate binding domain CYG28_RS17520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS17525 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS17530 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS17535 PF02515 CoA-transferase family III CYG28_RS17540 PF03471 Transporter associated domain CYG28_RS17540 PF03741 Integral membrane protein TerC family CYG28_RS17545 PF02308 MgtC family CYG28_RS17555 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS17555 PF00155 Aminotransferase class I and II CYG28_RS17565 PF00582 Universal stress protein family CYG28_RS17570 PF00679 Elongation factor G C-terminus CYG28_RS17570 PF14492 Elongation Factor G, domain II CYG28_RS17570 PF03764 Elongation factor G, domain IV CYG28_RS17570 PF03144 Elongation factor Tu domain 2 CYG28_RS17570 PF00009 Elongation factor Tu GTP binding domain CYG28_RS17580 PF00701 Dihydrodipicolinate synthetase family CYG28_RS17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS17585 PF03466 LysR substrate binding domain CYG28_RS17590 PF02515 CoA-transferase family III CYG28_RS17595 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS17600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS17600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS17600 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS17605 PF01575 MaoC like domain CYG28_RS17620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYG28_RS17620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYG28_RS17625 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS17630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS17630 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS17630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS17635 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS17640 PF13380 CoA binding domain CYG28_RS17640 PF13607 Succinyl-CoA ligase like flavodoxin domain CYG28_RS17650 PF00676 Dehydrogenase E1 component CYG28_RS17655 PF02779 Transketolase, pyrimidine binding domain CYG28_RS17655 PF02780 Transketolase, C-terminal domain CYG28_RS17660 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS17665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYG28_RS17665 PF00364 Biotin-requiring enzyme CYG28_RS17665 PF02817 e3 binding domain CYG28_RS17670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYG28_RS17670 PF02770 Acyl-CoA dehydrogenase, middle domain CYG28_RS17670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYG28_RS17675 PF00501 AMP-binding enzyme CYG28_RS17675 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS17685 PF13458 Periplasmic binding protein CYG28_RS17690 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS17695 PF00005 ABC transporter CYG28_RS17695 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG28_RS17700 PF00005 ABC transporter CYG28_RS17705 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS17705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG28_RS17720 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS17735 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS17750 PF00899 ThiF family CYG28_RS17755 PF03572 Peptidase family S41 CYG28_RS17755 PF13180 PDZ domain CYG28_RS17760 PF01551 Peptidase family M23 CYG28_RS17765 PF00300 Histidine phosphatase superfamily (branch 1) CYG28_RS17770 PF00581 Rhodanese-like domain CYG28_RS17770 PF12368 Rhodanase C-terminal CYG28_RS17770 PF17773 UPF0176 acylphosphatase like domain CYG28_RS17775 PF00462 Glutaredoxin CYG28_RS17780 PF02556 Preprotein translocase subunit SecB CYG28_RS17785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CYG28_RS17785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CYG28_RS17790 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS17795 PF00588 SpoU rRNA Methylase family CYG28_RS17805 PF08241 Methyltransferase domain CYG28_RS17810 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYG28_RS17815 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CYG28_RS17825 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS17830 PF00005 ABC transporter CYG28_RS17840 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG28_RS17840 PF01799 [2Fe-2S] binding domain CYG28_RS17845 PF00941 FAD binding domain in molybdopterin dehydrogenase CYG28_RS17845 PF03450 CO dehydrogenase flavoprotein C-terminal domain CYG28_RS17850 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CYG28_RS17850 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CYG28_RS17855 PF03480 Bacterial extracellular solute-binding protein, family 7 CYG28_RS17860 PF00355 Rieske [2Fe-2S] domain CYG28_RS17865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS17865 PF14759 Reductase C-terminal CYG28_RS17870 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYG28_RS17870 PF00355 Rieske [2Fe-2S] domain CYG28_RS17880 PF00857 Isochorismatase family CYG28_RS17895 PF17645 Arylmalonate decarboxylase CYG28_RS17905 PF12804 MobA-like NTP transferase domain CYG28_RS17915 PF01047 MarR family CYG28_RS17920 PF02386 Cation transport protein CYG28_RS17925 PF02080 TrkA-C domain CYG28_RS17925 PF02254 TrkA-N domain CYG28_RS17930 PF02954 Bacterial regulatory protein, Fis family CYG28_RS17930 PF00072 Response regulator receiver domain CYG28_RS17930 PF00158 Sigma-54 interaction domain CYG28_RS17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS17935 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS17935 PF00989 PAS fold CYG28_RS17935 PF00672 HAMP domain CYG28_RS17945 PF01189 16S rRNA methyltransferase RsmB/F CYG28_RS17945 PF01029 NusB family CYG28_RS17955 PF01958 Domain of unknown function DUF108 CYG28_RS17955 PF03447 Homoserine dehydrogenase, NAD binding domain CYG28_RS17975 PF01810 LysE type translocator CYG28_RS17980 PF03466 LysR substrate binding domain CYG28_RS17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS17990 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS18000 PF00155 Aminotransferase class I and II CYG28_RS18005 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS18015 PF00682 HMGL-like CYG28_RS18020 PF02481 DNA recombination-mediator protein A CYG28_RS18020 PF17782 DprA winged helix domain CYG28_RS18025 PF01037 Lrp/AsnC ligand binding domain CYG28_RS18030 PF00266 Aminotransferase class-V CYG28_RS18035 PF01327 Polypeptide deformylase CYG28_RS18050 PF00551 Formyl transferase CYG28_RS18050 PF02911 Formyl transferase, C-terminal domain CYG28_RS18060 PF13419 Haloacid dehalogenase-like hydrolase CYG28_RS18070 PF03641 Possible lysine decarboxylase CYG28_RS18080 PF00919 Uncharacterized protein family UPF0004 CYG28_RS18080 PF04055 Radical SAM superfamily CYG28_RS18080 PF18693 TRAM domain CYG28_RS18085 PF01361 Tautomerase enzyme CYG28_RS18090 PF01266 FAD dependent oxidoreductase CYG28_RS18095 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS18100 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS18100 PF07729 FCD domain CYG28_RS18115 PF00202 Aminotransferase class-III CYG28_RS18120 PF00491 Arginase family CYG28_RS18130 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS18135 PF02627 Carboxymuconolactone decarboxylase family CYG28_RS18140 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS18145 PF01614 Bacterial transcriptional regulator CYG28_RS18145 PF09339 IclR helix-turn-helix domain CYG28_RS18150 PF00501 AMP-binding enzyme CYG28_RS18150 PF13193 AMP-binding enzyme C-terminal domain CYG28_RS18155 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS18165 PF12951 Passenger-associated-transport-repeat CYG28_RS18165 PF12951 Passenger-associated-transport-repeat CYG28_RS18195 PF01168 Alanine racemase, N-terminal domain CYG28_RS18195 PF14031 Putative serine dehydratase domain CYG28_RS18200 PF07411 Domain of unknown function (DUF1508) CYG28_RS18205 PF01145 SPFH domain / Band 7 family CYG28_RS18215 PF01042 Endoribonuclease L-PSP CYG28_RS18265 PF03837 RecT family CYG28_RS18300 PF00589 Phage integrase family CYG28_RS18320 PF03466 LysR substrate binding domain CYG28_RS18320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS18335 PF02096 60Kd inner membrane protein CYG28_RS18335 PF14849 YidC periplasmic domain CYG28_RS18340 PF01809 Putative membrane protein insertion efficiency factor CYG28_RS18345 PF00825 Ribonuclease P CYG28_RS18350 PF00468 Ribosomal protein L34 CYG28_RS18355 PF00308 Bacterial dnaA protein CYG28_RS18355 PF11638 DnaA N-terminal domain CYG28_RS18355 PF08299 Bacterial dnaA protein helix-turn-helix CYG28_RS18360 PF02768 DNA polymerase III beta subunit, C-terminal domain CYG28_RS18360 PF02767 DNA polymerase III beta subunit, central domain CYG28_RS18360 PF00712 DNA polymerase III beta subunit, N-terminal domain CYG28_RS18365 PF01751 Toprim domain CYG28_RS18365 PF00204 DNA gyrase B CYG28_RS18365 PF00986 DNA gyrase B subunit, carboxyl terminus CYG28_RS18365 PF18053 DNA gyrase B subunit insert domain CYG28_RS18365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS18370 PF01614 Bacterial transcriptional regulator CYG28_RS18370 PF09339 IclR helix-turn-helix domain CYG28_RS18375 PF01425 Amidase CYG28_RS18380 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS18390 PF01070 FMN-dependent dehydrogenase CYG28_RS18415 PF09278 MerR, DNA binding CYG28_RS18415 PF00376 MerR family regulatory protein CYG28_RS18440 PF02803 Thiolase, C-terminal domain CYG28_RS18440 PF00108 Thiolase, N-terminal domain CYG28_RS18445 PF01039 Carboxyl transferase domain CYG28_RS18450 PF02785 Biotin carboxylase C-terminal domain CYG28_RS18450 PF00289 Biotin carboxylase, N-terminal domain CYG28_RS18450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG28_RS18450 PF00364 Biotin-requiring enzyme CYG28_RS18460 PF00202 Aminotransferase class-III CYG28_RS18465 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS18470 PF01168 Alanine racemase, N-terminal domain CYG28_RS18470 PF14031 Putative serine dehydratase domain CYG28_RS18475 PF16868 NMT1-like family CYG28_RS18485 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS18485 PF00593 TonB dependent receptor CYG28_RS18490 PF04361 Protein of unknown function (DUF494) CYG28_RS18505 PF01131 DNA topoisomerase CYG28_RS18505 PF01751 Toprim domain CYG28_RS18515 PF00005 ABC transporter CYG28_RS18520 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS18530 PF00171 Aldehyde dehydrogenase family CYG28_RS18540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG28_RS18540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG28_RS18540 PF00205 Thiamine pyrophosphate enzyme, central domain CYG28_RS18545 PF01037 Lrp/AsnC ligand binding domain CYG28_RS18550 PF01062 Bestrophin, RFP-TM, chloride channel CYG28_RS18560 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CYG28_RS18575 PF02574 Homocysteine S-methyltransferase CYG28_RS18575 PF00809 Pterin binding enzyme CYG28_RS18575 PF02607 B12 binding domain CYG28_RS18575 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYG28_RS18575 PF02310 B12 binding domain CYG28_RS18580 PF00593 TonB dependent receptor CYG28_RS18580 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS18585 PF01497 Periplasmic binding protein CYG28_RS18590 PF05690 Thiazole biosynthesis protein ThiG CYG28_RS18595 PF08543 Phosphomethylpyrimidine kinase CYG28_RS18610 PF02321 Outer membrane efflux protein CYG28_RS18615 PF01467 Cytidylyltransferase-like CYG28_RS18625 PF01594 AI-2E family transporter CYG28_RS18635 PF02254 TrkA-N domain CYG28_RS18635 PF07885 Ion channel CYG28_RS18650 PF00164 Ribosomal protein S12/S23 CYG28_RS18655 PF00177 Ribosomal protein S7p/S5e CYG28_RS18660 PF00009 Elongation factor Tu GTP binding domain CYG28_RS18660 PF03764 Elongation factor G, domain IV CYG28_RS18660 PF14492 Elongation Factor G, domain II CYG28_RS18660 PF00679 Elongation factor G C-terminus CYG28_RS18660 PF03144 Elongation factor Tu domain 2 CYG28_RS18665 PF00009 Elongation factor Tu GTP binding domain CYG28_RS18665 PF03143 Elongation factor Tu C-terminal domain CYG28_RS18665 PF03144 Elongation factor Tu domain 2 CYG28_RS18670 PF00338 Ribosomal protein S10p/S20e CYG28_RS18675 PF00297 Ribosomal protein L3 CYG28_RS18680 PF00573 Ribosomal protein L4/L1 family CYG28_RS18685 PF00276 Ribosomal protein L23 CYG28_RS18690 PF00181 Ribosomal Proteins L2, RNA binding domain CYG28_RS18690 PF03947 Ribosomal Proteins L2, C-terminal domain CYG28_RS18695 PF00203 Ribosomal protein S19 CYG28_RS18700 PF00237 Ribosomal protein L22p/L17e CYG28_RS18705 PF07650 KH domain CYG28_RS18705 PF00189 Ribosomal protein S3, C-terminal domain CYG28_RS18710 PF00252 Ribosomal protein L16p/L10e CYG28_RS18715 PF00831 Ribosomal L29 protein CYG28_RS18720 PF00366 Ribosomal protein S17 CYG28_RS18730 PF00171 Aldehyde dehydrogenase family CYG28_RS18740 PF00238 Ribosomal protein L14p/L23e CYG28_RS18745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CYG28_RS18750 PF00673 ribosomal L5P family C-terminus CYG28_RS18750 PF00281 Ribosomal protein L5 CYG28_RS18755 PF00253 Ribosomal protein S14p/S29e CYG28_RS18760 PF00410 Ribosomal protein S8 CYG28_RS18765 PF00347 Ribosomal protein L6 CYG28_RS18770 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CYG28_RS18775 PF03719 Ribosomal protein S5, C-terminal domain CYG28_RS18775 PF00333 Ribosomal protein S5, N-terminal domain CYG28_RS18780 PF00327 Ribosomal protein L30p/L7e CYG28_RS18785 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CYG28_RS18790 PF00344 SecY translocase CYG28_RS18795 PF01176 Translation initiation factor 1A / IF-1 CYG28_RS18800 PF00444 Ribosomal protein L36 CYG28_RS18805 PF00416 Ribosomal protein S13/S18 CYG28_RS18810 PF00411 Ribosomal protein S11 CYG28_RS18815 PF00163 Ribosomal protein S4/S9 N-terminal domain CYG28_RS18815 PF01479 S4 domain CYG28_RS18820 PF01000 RNA polymerase Rpb3/RpoA insert domain CYG28_RS18820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYG28_RS18820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYG28_RS18825 PF01196 Ribosomal protein L17 CYG28_RS18830 PF01230 HIT domain CYG28_RS18835 PF03091 CutA1 divalent ion tolerance protein CYG28_RS18840 PF11412 Disulphide bond corrector protein DsbC CYG28_RS18840 PF02683 Cytochrome C biogenesis protein transmembrane region CYG28_RS18845 PF00892 EamA-like transporter family CYG28_RS18850 PF00490 Delta-aminolevulinic acid dehydratase CYG28_RS18855 PF01926 50S ribosome-binding GTPase CYG28_RS18860 PF00034 Cytochrome c CYG28_RS18865 PF05140 ResB-like family CYG28_RS18870 PF01578 Cytochrome C assembly protein CYG28_RS18875 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYG28_RS18875 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYG28_RS18880 PF13627 Prokaryotic lipoprotein-attachment site CYG28_RS18885 PF01491 Frataxin-like domain CYG28_RS18890 PF00905 Penicillin binding protein transpeptidase domain CYG28_RS18890 PF00912 Transglycosylase CYG28_RS18890 PF17092 Penicillin-binding protein OB-like domain CYG28_RS18895 PF01202 Shikimate kinase CYG28_RS18900 PF01761 3-dehydroquinate synthase CYG28_RS18905 PF01966 HD domain CYG28_RS18905 PF13286 Phosphohydrolase-associated domain CYG28_RS18910 PF00043 Glutathione S-transferase, C-terminal domain CYG28_RS18910 PF13417 Glutathione S-transferase, N-terminal domain CYG28_RS18915 PF17760 UvrA interaction domain CYG28_RS18915 PF17755 UvrA DNA-binding domain CYG28_RS18920 PF07690 Major Facilitator Superfamily CYG28_RS18925 PF00436 Single-strand binding protein family CYG28_RS18930 PF00593 TonB dependent receptor CYG28_RS18930 PF07715 TonB-dependent Receptor Plug Domain CYG28_RS18940 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG28_RS18950 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS18960 PF03466 LysR substrate binding domain CYG28_RS18965 PF01979 Amidohydrolase family CYG28_RS18970 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS18975 PF13439 Glycosyltransferase Family 4 CYG28_RS18975 PF00534 Glycosyl transferases group 1 CYG28_RS18985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS18985 PF03466 LysR substrate binding domain CYG28_RS18995 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19000 PF00005 ABC transporter CYG28_RS19020 PF01274 Malate synthase CYG28_RS19040 PF01040 UbiA prenyltransferase family CYG28_RS19045 PF00155 Aminotransferase class I and II CYG28_RS19050 PF13185 GAF domain CYG28_RS19055 PF00701 Dihydrodipicolinate synthetase family CYG28_RS19070 PF01476 LysM domain CYG28_RS19070 PF04972 BON domain CYG28_RS19075 PF05690 Thiazole biosynthesis protein ThiG CYG28_RS19075 PF02597 ThiS family CYG28_RS19080 PF00561 alpha/beta hydrolase fold CYG28_RS19085 PF02390 Putative methyltransferase CYG28_RS19100 PF00682 HMGL-like CYG28_RS19105 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS19125 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS19125 PF07702 UTRA domain CYG28_RS19130 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS19140 PF00392 Bacterial regulatory proteins, gntR family CYG28_RS19140 PF07702 UTRA domain CYG28_RS19145 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19155 PF00005 ABC transporter CYG28_RS19160 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS19165 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS19170 PF08659 KR domain CYG28_RS19170 PF00550 Phosphopantetheine attachment site CYG28_RS19170 PF14765 Polyketide synthase dehydratase CYG28_RS19170 PF00698 Acyl transferase domain CYG28_RS19170 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG28_RS19170 PF16197 Ketoacyl-synthetase C-terminal extension CYG28_RS19170 PF08990 Erythronolide synthase docking CYG28_RS19170 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG28_RS19170 PF08240 Alcohol dehydrogenase GroES-like domain CYG28_RS19175 PF02515 CoA-transferase family III CYG28_RS19180 PF00440 Bacterial regulatory proteins, tetR family CYG28_RS19185 PF09297 NADH pyrophosphatase zinc ribbon domain CYG28_RS19185 PF00293 NUDIX domain CYG28_RS19190 PF00111 2Fe-2S iron-sulfur cluster binding domain CYG28_RS19190 PF00175 Oxidoreductase NAD-binding domain CYG28_RS19190 PF00970 Oxidoreductase FAD-binding domain CYG28_RS19195 PF01425 Amidase CYG28_RS19205 PF03466 LysR substrate binding domain CYG28_RS19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG28_RS19210 PF13458 Periplasmic binding protein CYG28_RS19220 PF00005 ABC transporter CYG28_RS19230 PF02653 Branched-chain amino acid transport system / permease component CYG28_RS19240 PF00355 Rieske [2Fe-2S] domain CYG28_RS19255 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CYG28_RS19255 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CYG28_RS19270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYG28_RS19270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYG28_RS19270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYG28_RS19275 PF07690 Major Facilitator Superfamily CYG28_RS19280 PF00132 Bacterial transferase hexapeptide (six repeats) CYG28_RS19280 PF12804 MobA-like NTP transferase domain CYG28_RS19280 PF14602 Hexapeptide repeat of succinyl-transferase CYG28_RS19300 PF02630 SCO1/SenC CYG28_RS19305 PF01040 UbiA prenyltransferase family CYG28_RS19310 PF02628 Cytochrome oxidase assembly protein CYG28_RS19330 PF00510 Cytochrome c oxidase subunit III CYG28_RS19345 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYG28_RS19350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYG28_RS19350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYG28_RS19360 PF00999 Sodium/hydrogen exchanger family CYG28_RS19365 PF00149 Calcineurin-like phosphoesterase CYG28_RS19370 PF04545 Sigma-70, region 4 CYG28_RS19370 PF04542 Sigma-70 region 2 CYG28_RS19370 PF00140 Sigma-70 factor, region 1.2 CYG28_RS19380 PF00756 Putative esterase CYG28_RS19385 PF00107 Zinc-binding dehydrogenase CYG28_RS19385 PF08240 Alcohol dehydrogenase GroES-like domain CYG28_RS19395 PF01493 GXGXG motif CYG28_RS19395 PF01645 Conserved region in glutamate synthase CYG28_RS19395 PF04898 Glutamate synthase central domain CYG28_RS19395 PF00310 Glutamine amidotransferases class-II CYG28_RS19400 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG28_RS19400 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYG28_RS19405 PF03922 OmpW family CYG28_RS19410 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS19415 PF00005 ABC transporter CYG28_RS19420 PF02405 Permease MlaE CYG28_RS19425 PF02470 MlaD protein CYG28_RS19430 PF04333 MlaA lipoprotein CYG28_RS19445 PF01061 ABC-2 type transporter CYG28_RS19455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYG28_RS19460 PF01634 ATP phosphoribosyltransferase CYG28_RS19465 PF00815 Histidinol dehydrogenase CYG28_RS19470 PF00155 Aminotransferase class I and II CYG28_RS19475 PF00475 Imidazoleglycerol-phosphate dehydratase CYG28_RS19480 PF00117 Glutamine amidotransferase class-I CYG28_RS19485 PF00977 Histidine biosynthesis protein CYG28_RS19490 PF00977 Histidine biosynthesis protein CYG28_RS19495 PF01502 Phosphoribosyl-AMP cyclohydrolase CYG28_RS19500 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CYG28_RS19505 PF01230 HIT domain CYG28_RS19510 PF02416 mttA/Hcf106 family CYG28_RS19515 PF02416 mttA/Hcf106 family CYG28_RS19520 PF00902 Sec-independent protein translocase protein (TatC) CYG28_RS19530 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS19535 PF02917 Pertussis toxin, subunit 1 CYG28_RS19540 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain CYG28_RS19540 PF03440 Aerolysin/Pertussis toxin (APT) domain CYG28_RS19545 PF09275 Pertussis toxin S4 subunit CYG28_RS19550 PF09276 Pertussis toxin S5 subunit CYG28_RS19555 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain CYG28_RS19555 PF03440 Aerolysin/Pertussis toxin (APT) domain CYG28_RS19560 PF04956 TrbC/VIRB2 family CYG28_RS19565 PF05101 Type IV secretory pathway, VirB3-like protein CYG28_RS19570 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CYG28_RS19575 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CYG28_RS19585 PF04335 VirB8 protein CYG28_RS19590 PF03524 Conjugal transfer protein CYG28_RS19595 PF03743 Bacterial conjugation TrbI-like protein CYG28_RS19600 PF00437 Type II/IV secretion system protein CYG28_RS19610 PF00892 EamA-like transporter family CYG28_RS19630 PF10396 GTP-binding protein TrmE N-terminus CYG28_RS19630 PF01926 50S ribosome-binding GTPase CYG28_RS19630 PF12631 MnmE helical domain CYG28_RS19635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS19640 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19645 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG28_RS19645 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19660 PF01960 ArgJ family CYG28_RS19670 PF00293 NUDIX domain CYG28_RS19695 PF02321 Outer membrane efflux protein CYG28_RS19700 PF00873 AcrB/AcrD/AcrF family CYG28_RS19705 PF00873 AcrB/AcrD/AcrF family CYG28_RS19710 PF13533 Biotin-lipoyl like CYG28_RS19715 PF07072 Cell division protein CYG28_RS19720 PF01121 Dephospho-CoA kinase CYG28_RS19725 PF06750 Bacterial Peptidase A24 N-terminal domain CYG28_RS19725 PF01478 Type IV leader peptidase family CYG28_RS19740 PF02569 Pantoate-beta-alanine ligase CYG28_RS19745 PF02616 Segregation and condensation protein ScpA CYG28_RS19755 PF07690 Major Facilitator Superfamily CYG28_RS19760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG28_RS19760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG28_RS19770 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS19775 PF00005 ABC transporter CYG28_RS19780 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19785 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19790 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG28_RS19795 PF00005 ABC transporter CYG28_RS19800 PF18075 FtsX extracellular domain CYG28_RS19805 PF03975 CheD chemotactic sensory transduction CYG28_RS19815 PF14815 NUDIX domain CYG28_RS19815 PF00730 HhH-GPD superfamily base excision DNA repair protein CYG28_RS19815 PF00633 Helix-hairpin-helix motif CYG28_RS19815 PF10576 Iron-sulfur binding domain of endonuclease III CYG28_RS19825 PF08241 Methyltransferase domain CYG28_RS19835 PF02515 CoA-transferase family III CYG28_RS19840 PF02515 CoA-transferase family III CYG28_RS19850 PF03401 Tripartite tricarboxylate transporter family receptor CYG28_RS19855 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS19860 PF00881 Nitroreductase family CYG28_RS19870 PF00682 HMGL-like CYG28_RS19875 PF00378 Enoyl-CoA hydratase/isomerase CYG28_RS19880 PF02515 CoA-transferase family III CYG28_RS19895 PF00199 Catalase CYG28_RS19895 PF06628 Catalase-related immune-responsive CYG28_RS19900 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19905 PF00005 ABC transporter CYG28_RS19915 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CYG28_RS19920 PF01546 Peptidase family M20/M25/M40 CYG28_RS19920 PF07687 Peptidase dimerisation domain CYG28_RS19925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS19925 PF00005 ABC transporter CYG28_RS19930 PF00005 ABC transporter CYG28_RS19930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG28_RS19935 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG28_RS19935 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19940 PF00528 Binding-protein-dependent transport system inner membrane component CYG28_RS19945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG28_RS19950 PF10396 GTP-binding protein TrmE N-terminus CYG28_RS19950 PF12631 MnmE helical domain CYG28_RS19950 PF01926 50S ribosome-binding GTPase CYG28_RS19960 PF00072 Response regulator receiver domain CYG28_RS19960 PF00486 Transcriptional regulatory protein, C terminal CYG28_RS19965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG28_RS19965 PF00512 His Kinase A (phospho-acceptor) domain CYG28_RS19980 PF01970 Tripartite tricarboxylate transporter TctA family CYG28_RS19985 PF00155 Aminotransferase class I and II CYG28_RS19990 PF00313 'Cold-shock' DNA-binding domain