locus-tag class description AVS42_RS00005 PF01134 Glucose inhibited division protein A AVS42_RS00005 PF13932 GidA associated domain AVS42_RS00010 PF02527 rRNA small subunit methyltransferase G AVS42_RS00015 PF13614 AAA domain AVS42_RS00025 PF02195 ParB-like nuclease domain AVS42_RS00025 PF17762 HTH domain found in ParB protein AVS42_RS00030 PF00710 Asparaginase, N-terminal AVS42_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain AVS42_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain AVS42_RS00035 PF00710 Asparaginase, N-terminal AVS42_RS00055 PF00009 Elongation factor Tu GTP binding domain AVS42_RS00055 PF03143 Elongation factor Tu C-terminal domain AVS42_RS00055 PF03144 Elongation factor Tu domain 2 AVS42_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVS42_RS00070 PF02357 Transcription termination factor nusG AVS42_RS00070 PF00467 KOW motif AVS42_RS00075 PF03946 Ribosomal protein L11, N-terminal domain AVS42_RS00075 PF00298 Ribosomal protein L11, RNA binding domain AVS42_RS00080 PF00687 Ribosomal protein L1p/L10e family AVS42_RS00085 PF00466 Ribosomal protein L10 AVS42_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain AVS42_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain AVS42_RS00095 PF00562 RNA polymerase Rpb2, domain 6 AVS42_RS00095 PF10385 RNA polymerase beta subunit external 1 domain AVS42_RS00095 PF04560 RNA polymerase Rpb2, domain 7 AVS42_RS00095 PF04561 RNA polymerase Rpb2, domain 2 AVS42_RS00095 PF04563 RNA polymerase beta subunit AVS42_RS00095 PF04565 RNA polymerase Rpb2, domain 3 AVS42_RS00100 PF04983 RNA polymerase Rpb1, domain 3 AVS42_RS00100 PF00623 RNA polymerase Rpb1, domain 2 AVS42_RS00100 PF04997 RNA polymerase Rpb1, domain 1 AVS42_RS00100 PF04998 RNA polymerase Rpb1, domain 5 AVS42_RS00100 PF05000 RNA polymerase Rpb1, domain 4 AVS42_RS00130 PF00072 Response regulator receiver domain AVS42_RS00130 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS00140 PF02515 CoA-transferase family III AVS42_RS00155 PF01575 MaoC like domain AVS42_RS00160 PF03466 LysR substrate binding domain AVS42_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS00165 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit AVS42_RS00190 PF05746 DALR anticodon binding domain AVS42_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit AVS42_RS00200 PF01553 Acyltransferase AVS42_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS42_RS00215 PF01327 Polypeptide deformylase AVS42_RS00250 PF02615 Malate/L-lactate dehydrogenase AVS42_RS00255 PF00561 alpha/beta hydrolase fold AVS42_RS00260 PF07021 Methionine biosynthesis protein MetW AVS42_RS00260 PF00561 alpha/beta hydrolase fold AVS42_RS00275 PF07690 Major Facilitator Superfamily AVS42_RS00285 PF01177 Asp/Glu/Hydantoin racemase AVS42_RS00290 PF00005 ABC transporter AVS42_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS00340 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS00355 PF00175 Oxidoreductase NAD-binding domain AVS42_RS00355 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS00355 PF00970 Oxidoreductase FAD-binding domain AVS42_RS00360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS00370 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS00400 PF00183 Hsp90 protein AVS42_RS00405 PF13417 Glutathione S-transferase, N-terminal domain AVS42_RS00405 PF00043 Glutathione S-transferase, C-terminal domain AVS42_RS00410 PF01510 N-acetylmuramoyl-L-alanine amidase AVS42_RS00420 PF01578 Cytochrome C assembly protein AVS42_RS00425 PF02978 Signal peptide binding domain AVS42_RS00425 PF00448 SRP54-type protein, GTPase domain AVS42_RS00425 PF02881 SRP54-type protein, helical bundle domain AVS42_RS00440 PF02719 Polysaccharide biosynthesis protein AVS42_RS00450 PF10997 Alternate to MurJ AVS42_RS00455 PF00862 Sucrose synthase AVS42_RS00455 PF00534 Glycosyl transferases group 1 AVS42_RS00460 PF02397 Bacterial sugar transferase AVS42_RS00465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVS42_RS00475 PF02350 UDP-N-acetylglucosamine 2-epimerase AVS42_RS00480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVS42_RS00485 PF00132 Bacterial transferase hexapeptide (six repeats) AVS42_RS00490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVS42_RS00490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVS42_RS00495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS42_RS00500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVS42_RS00500 PF00534 Glycosyl transferases group 1 AVS42_RS00510 PF03309 Type III pantothenate kinase AVS42_RS00520 PF02405 Permease MlaE AVS42_RS00525 PF00005 ABC transporter AVS42_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase AVS42_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain AVS42_RS00550 PF01063 Amino-transferase class IV AVS42_RS00555 PF04359 Protein of unknown function (DUF493) AVS42_RS00560 PF03099 Biotin/lipoate A/B protein ligase family AVS42_RS00565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVS42_RS00565 PF04055 Radical SAM superfamily AVS42_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVS42_RS00575 PF04321 RmlD substrate binding domain AVS42_RS00580 PF16363 GDP-mannose 4,6 dehydratase AVS42_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS42_RS00600 PF01323 DSBA-like thioredoxin domain AVS42_RS00600 PF00085 Thioredoxin AVS42_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain AVS42_RS00610 PF05746 DALR anticodon binding domain AVS42_RS00610 PF00750 tRNA synthetases class I (R) AVS42_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS00640 PF13416 Bacterial extracellular solute-binding protein AVS42_RS00645 PF17912 MalK OB fold domain AVS42_RS00645 PF00005 ABC transporter AVS42_RS00650 PF00149 Calcineurin-like phosphoesterase AVS42_RS00660 PF12857 TOBE-like domain AVS42_RS00660 PF00005 ABC transporter AVS42_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS00680 PF00356 Bacterial regulatory proteins, lacI family AVS42_RS00690 PF01425 Amidase AVS42_RS00695 PF08502 LeuA allosteric (dimerisation) domain AVS42_RS00695 PF00682 HMGL-like AVS42_RS00705 PF04963 Sigma-54 factor, core binding domain AVS42_RS00705 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVS42_RS00705 PF04552 Sigma-54, DNA binding domain AVS42_RS00715 PF03466 LysR substrate binding domain AVS42_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS00730 PF13609 Gram-negative porin AVS42_RS00735 PF00291 Pyridoxal-phosphate dependent enzyme AVS42_RS00735 PF00585 C-terminal regulatory domain of Threonine dehydratase AVS42_RS00750 PF07729 FCD domain AVS42_RS00750 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS00755 PF02515 CoA-transferase family III AVS42_RS00765 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS00775 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS00785 PF03746 LamB/YcsF family AVS42_RS00790 PF02626 Carboxyltransferase domain, subdomain A and B AVS42_RS00795 PF02682 Carboxyltransferase domain, subdomain C and D AVS42_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS00805 PF03466 LysR substrate binding domain AVS42_RS00810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS42_RS00810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS42_RS00810 PF01842 ACT domain AVS42_RS00820 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS00820 PF00672 HAMP domain AVS42_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS00825 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS00825 PF00072 Response regulator receiver domain AVS42_RS00830 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS00830 PF11808 Phosphate regulon sensor protein PhoR AVS42_RS00830 PF00989 PAS fold AVS42_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS00835 PF00072 Response regulator receiver domain AVS42_RS00835 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS00840 PF01209 ubiE/COQ5 methyltransferase family AVS42_RS00855 PF03109 ABC1 family AVS42_RS00870 PF00005 ABC transporter AVS42_RS00870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS00875 PF04536 TPM domain AVS42_RS00885 PF00271 Helicase conserved C-terminal domain AVS42_RS00885 PF00270 DEAD/DEAH box helicase AVS42_RS00890 PF01810 LysE type translocator AVS42_RS00895 PF16658 Class II release factor RF3, C-terminal domain AVS42_RS00895 PF03144 Elongation factor Tu domain 2 AVS42_RS00895 PF00009 Elongation factor Tu GTP binding domain AVS42_RS00905 PF00210 Ferritin-like domain AVS42_RS00930 PF00581 Rhodanese-like domain AVS42_RS00930 PF17773 UPF0176 acylphosphatase like domain AVS42_RS00935 PF01588 Putative tRNA binding domain AVS42_RS00935 PF09334 tRNA synthetases class I (M) AVS42_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase AVS42_RS00960 PF00692 dUTPase AVS42_RS00985 PF01276 Orn/Lys/Arg decarboxylase, major domain AVS42_RS00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AVS42_RS00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AVS42_RS01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVS42_RS01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVS42_RS01005 PF02535 ZIP Zinc transporter AVS42_RS01010 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVS42_RS01010 PF01571 Aminomethyltransferase folate-binding domain AVS42_RS01015 PF01597 Glycine cleavage H-protein AVS42_RS01020 PF02347 Glycine cleavage system P-protein AVS42_RS01025 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS01025 PF07729 FCD domain AVS42_RS01030 PF02515 CoA-transferase family III AVS42_RS01040 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS01060 PF12146 Serine aminopeptidase, S33 AVS42_RS01070 PF02426 Muconolactone delta-isomerase AVS42_RS01075 PF01144 Coenzyme A transferase AVS42_RS01080 PF01144 Coenzyme A transferase AVS42_RS01085 PF09339 IclR helix-turn-helix domain AVS42_RS01085 PF01614 Bacterial transcriptional regulator AVS42_RS01095 PF02667 Short chain fatty acid transporter AVS42_RS01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS42_RS01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS42_RS01105 PF03797 Autotransporter beta-domain AVS42_RS01105 PF00082 Subtilase family AVS42_RS01110 PF00311 Phosphoenolpyruvate carboxylase AVS42_RS01115 PF06508 Queuosine biosynthesis protein QueC AVS42_RS01140 PF01565 FAD binding domain AVS42_RS01140 PF02913 FAD linked oxidases, C-terminal domain AVS42_RS01145 PF00171 Aldehyde dehydrogenase family AVS42_RS01150 PF01964 Radical SAM ThiC family AVS42_RS01150 PF13667 ThiC-associated domain AVS42_RS01155 PF02355 Protein export membrane protein AVS42_RS01155 PF07549 SecD/SecF GG Motif AVS42_RS01160 PF09518 HindIII restriction endonuclease AVS42_RS01190 PF02627 Carboxymuconolactone decarboxylase family AVS42_RS01195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS42_RS01195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS42_RS01200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS42_RS01200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS42_RS01205 PF07702 UTRA domain AVS42_RS01205 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS01210 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS01215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS01225 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS01230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVS42_RS01235 PF01743 Poly A polymerase head domain AVS42_RS01235 PF12626 Polymerase A arginine-rich C-terminus AVS42_RS01235 PF12627 Probable RNA and SrmB- binding site of polymerase A AVS42_RS01245 PF00308 Bacterial dnaA protein AVS42_RS01250 PF02769 AIR synthase related protein, C-terminal domain AVS42_RS01250 PF00586 AIR synthase related protein, N-terminal domain AVS42_RS01260 PF01119 DNA mismatch repair protein, C-terminal domain AVS42_RS01260 PF08676 MutL C terminal dimerisation domain AVS42_RS01265 PF09335 SNARE associated Golgi protein AVS42_RS01270 PF01520 N-acetylmuramoyl-L-alanine amidase AVS42_RS01270 PF11741 AMIN domain AVS42_RS01275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AVS42_RS01280 PF00206 Lyase AVS42_RS01280 PF10415 Fumarase C C-terminus AVS42_RS01290 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS01295 PF03466 LysR substrate binding domain AVS42_RS01305 PF02515 CoA-transferase family III AVS42_RS01310 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS01315 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS01315 PF18158 Adaptive response protein AidB N-terminal domain AVS42_RS01315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS01335 PF01654 Cytochrome bd terminal oxidase subunit I AVS42_RS01340 PF02322 Cytochrome bd terminal oxidase subunit II AVS42_RS01345 PF08173 Membrane bound YbgT-like protein AVS42_RS01350 PF00664 ABC transporter transmembrane region AVS42_RS01350 PF00005 ABC transporter AVS42_RS01355 PF00005 ABC transporter AVS42_RS01355 PF00664 ABC transporter transmembrane region AVS42_RS01360 PF00156 Phosphoribosyl transferase domain AVS42_RS01375 PF13609 Gram-negative porin AVS42_RS01400 PF04386 Stringent starvation protein B AVS42_RS01405 PF02798 Glutathione S-transferase, N-terminal domain AVS42_RS01405 PF00043 Glutathione S-transferase, C-terminal domain AVS42_RS01410 PF02167 Cytochrome C1 family AVS42_RS01415 PF00032 Cytochrome b(C-terminal)/b6/petD AVS42_RS01415 PF00033 Cytochrome b/b6/petB AVS42_RS01420 PF00355 Rieske [2Fe-2S] domain AVS42_RS01420 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVS42_RS01425 PF01741 Large-conductance mechanosensitive channel, MscL AVS42_RS01430 PF01784 NIF3 (NGG1p interacting factor 3) AVS42_RS01435 PF13180 PDZ domain AVS42_RS01445 PF04299 Putative FMN-binding domain AVS42_RS01450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS42_RS01455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS01460 PF07859 alpha/beta hydrolase fold AVS42_RS01470 PF00682 HMGL-like AVS42_RS01470 PF08502 LeuA allosteric (dimerisation) domain AVS42_RS01475 PF12833 Helix-turn-helix domain AVS42_RS01480 PF00920 Dehydratase family AVS42_RS01485 PF07690 Major Facilitator Superfamily AVS42_RS01490 PF03466 LysR substrate binding domain AVS42_RS01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS01500 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AVS42_RS01530 PF07859 alpha/beta hydrolase fold AVS42_RS01540 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS01545 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS01545 PF11862 Domain of unknown function (DUF3382) AVS42_RS01550 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS01550 PF00005 ABC transporter AVS42_RS01555 PF00005 ABC transporter AVS42_RS01570 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS01575 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS01575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS01575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS01580 PF00501 AMP-binding enzyme AVS42_RS01580 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS01600 PF00202 Aminotransferase class-III AVS42_RS01605 PF02581 Thiamine monophosphate synthase AVS42_RS01610 PF08543 Phosphomethylpyrimidine kinase AVS42_RS01615 PF00301 Rubredoxin AVS42_RS01620 PF02622 Uncharacterized ACR, COG1678 AVS42_RS01625 PF03652 Holliday junction resolvase AVS42_RS01630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS42_RS01630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS42_RS01635 PF01979 Amidohydrolase family AVS42_RS01640 PF01553 Acyltransferase AVS42_RS01645 PF00149 Calcineurin-like phosphoesterase AVS42_RS01655 PF00912 Transglycosylase AVS42_RS01670 PF00501 AMP-binding enzyme AVS42_RS01670 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS01675 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS01690 PF12706 Beta-lactamase superfamily domain AVS42_RS01695 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS01700 PF03466 LysR substrate binding domain AVS42_RS01710 PF11737 Protein of unknown function (DUF3300) AVS42_RS01720 PF00563 EAL domain AVS42_RS01720 PF03707 Bacterial signalling protein N terminal repeat AVS42_RS01720 PF00990 Diguanylate cyclase, GGDEF domain AVS42_RS01725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVS42_RS01725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVS42_RS01730 PF13532 2OG-Fe(II) oxygenase superfamily AVS42_RS01735 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AVS42_RS01740 PF04463 Protein of unknown function (DUF523) AVS42_RS01745 PF00005 ABC transporter AVS42_RS01750 PF01032 FecCD transport family AVS42_RS01755 PF01497 Periplasmic binding protein AVS42_RS01760 PF05171 Haemin-degrading HemS.ChuX domain AVS42_RS01765 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS01765 PF04886 PT repeat AVS42_RS01765 PF00593 TonB dependent receptor AVS42_RS01770 PF16220 Domain of unknown function (DUF4880) AVS42_RS01770 PF04773 FecR protein AVS42_RS01775 PF04542 Sigma-70 region 2 AVS42_RS01775 PF08281 Sigma-70, region 4 AVS42_RS01800 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVS42_RS01810 PF07729 FCD domain AVS42_RS01810 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS01830 PF00171 Aldehyde dehydrogenase family AVS42_RS01840 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS01840 PF00175 Oxidoreductase NAD-binding domain AVS42_RS01840 PF00970 Oxidoreductase FAD-binding domain AVS42_RS01865 PF03458 UPF0126 domain AVS42_RS01870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVS42_RS01870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVS42_RS01875 PF03372 Endonuclease/Exonuclease/phosphatase family AVS42_RS01880 PF00156 Phosphoribosyl transferase domain AVS42_RS01885 PF02637 GatB domain AVS42_RS01885 PF02934 GatB/GatE catalytic domain AVS42_RS01890 PF01425 Amidase AVS42_RS01895 PF02686 Glu-tRNAGln amidotransferase C subunit AVS42_RS01905 PF04085 rod shape-determining protein MreC AVS42_RS01915 PF03717 Penicillin-binding Protein dimerisation domain AVS42_RS01915 PF00905 Penicillin binding protein transpeptidase domain AVS42_RS01920 PF01098 Cell cycle protein AVS42_RS01925 PF02615 Malate/L-lactate dehydrogenase AVS42_RS01930 PF00939 Sodium:sulfate symporter transmembrane region AVS42_RS01935 PF00440 Bacterial regulatory proteins, tetR family AVS42_RS01945 PF00696 Amino acid kinase family AVS42_RS01950 PF03180 NLPA lipoprotein AVS42_RS01955 PF00578 AhpC/TSA family AVS42_RS01960 PF04972 BON domain AVS42_RS01965 PF13580 SIS domain AVS42_RS01975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS42_RS01980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVS42_RS01980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVS42_RS02000 PF02515 CoA-transferase family III AVS42_RS02005 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02010 PF02515 CoA-transferase family III AVS42_RS02025 PF09339 IclR helix-turn-helix domain AVS42_RS02030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS02040 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02045 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS02045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS42_RS02045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS42_RS02050 PF02515 CoA-transferase family III AVS42_RS02055 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS02055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS02055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS02060 PF03466 LysR substrate binding domain AVS42_RS02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS02070 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02090 PF00892 EamA-like transporter family AVS42_RS02095 PF01810 LysE type translocator AVS42_RS02100 PF12146 Serine aminopeptidase, S33 AVS42_RS02120 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVS42_RS02125 PF00535 Glycosyl transferase family 2 AVS42_RS02155 PF02667 Short chain fatty acid transporter AVS42_RS02170 PF00929 Exonuclease AVS42_RS02175 PF00873 AcrB/AcrD/AcrF family AVS42_RS02200 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS02205 PF03466 LysR substrate binding domain AVS42_RS02210 PF09330 D-lactate dehydrogenase, membrane binding AVS42_RS02210 PF01565 FAD binding domain AVS42_RS02215 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS02215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS02215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS02220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS02220 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS02220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS02225 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02230 PF01546 Peptidase family M20/M25/M40 AVS42_RS02230 PF07687 Peptidase dimerisation domain AVS42_RS02240 PF01042 Endoribonuclease L-PSP AVS42_RS02250 PF00107 Zinc-binding dehydrogenase AVS42_RS02250 PF08240 Alcohol dehydrogenase GroES-like domain AVS42_RS02255 PF03466 LysR substrate binding domain AVS42_RS02255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS02260 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS42_RS02260 PF13380 CoA binding domain AVS42_RS02265 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS02275 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02280 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AVS42_RS02285 PF01380 SIS domain AVS42_RS02290 PF01037 Lrp/AsnC ligand binding domain AVS42_RS02295 PF00108 Thiolase, N-terminal domain AVS42_RS02295 PF02803 Thiolase, C-terminal domain AVS42_RS02300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS42_RS02300 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS02300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS42_RS02305 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVS42_RS02305 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS02305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS02305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS02310 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02315 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS42_RS02315 PF13380 CoA binding domain AVS42_RS02315 PF00583 Acetyltransferase (GNAT) family AVS42_RS02330 PF00384 Molybdopterin oxidoreductase AVS42_RS02330 PF01568 Molydopterin dinucleotide binding domain AVS42_RS02355 PF01488 Shikimate / quinate 5-dehydrogenase AVS42_RS02355 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVS42_RS02355 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVS42_RS02360 PF00472 RF-1 domain AVS42_RS02360 PF03462 PCRF domain AVS42_RS02365 PF17827 PrmC N-terminal domain AVS42_RS02365 PF05175 Methyltransferase small domain AVS42_RS02370 PF00462 Glutaredoxin AVS42_RS02375 PF02441 Flavoprotein AVS42_RS02380 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02385 PF09084 NMT1/THI5 like AVS42_RS02390 PF00941 FAD binding domain in molybdopterin dehydrogenase AVS42_RS02390 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVS42_RS02395 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVS42_RS02395 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS42_RS02420 PF05036 Sporulation related domain AVS42_RS02420 PF03330 Lytic transglycolase AVS42_RS02425 PF03668 P-loop ATPase protein family AVS42_RS02435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS42_RS02435 PF00034 Cytochrome c AVS42_RS02435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS42_RS02440 PF02603 HPr Serine kinase N terminus AVS42_RS02440 PF07475 HPr Serine kinase C-terminal domain AVS42_RS02445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVS42_RS02450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVS42_RS02455 PF00005 ABC transporter AVS42_RS02475 PF00571 CBS domain AVS42_RS02475 PF01380 SIS domain AVS42_RS02480 PF02222 ATP-grasp domain AVS42_RS02480 PF01370 NAD dependent epimerase/dehydratase family AVS42_RS02485 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS02485 PF00593 TonB dependent receptor AVS42_RS02495 PF05199 GMC oxidoreductase AVS42_RS02495 PF00732 GMC oxidoreductase AVS42_RS02515 PF02938 GAD domain AVS42_RS02515 PF00152 tRNA synthetases class II (D, K and N) AVS42_RS02515 PF01336 OB-fold nucleic acid binding domain AVS42_RS02520 PF03372 Endonuclease/Exonuclease/phosphatase family AVS42_RS02525 PF13091 PLD-like domain AVS42_RS02550 PF13458 Periplasmic binding protein AVS42_RS02555 PF01425 Amidase AVS42_RS02560 PF05995 Cysteine dioxygenase type I AVS42_RS02565 PF01614 Bacterial transcriptional regulator AVS42_RS02565 PF09339 IclR helix-turn-helix domain AVS42_RS02570 PF02515 CoA-transferase family III AVS42_RS02575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS42_RS02575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS42_RS02575 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS02580 PF05275 Copper resistance protein B precursor (CopB) AVS42_RS02585 PF07731 Multicopper oxidase AVS42_RS02585 PF00394 Multicopper oxidase AVS42_RS02585 PF07732 Multicopper oxidase AVS42_RS02615 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AVS42_RS02615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS42_RS02615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS42_RS02620 PF02515 CoA-transferase family III AVS42_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS02640 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS02645 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS02650 PF01256 Carbohydrate kinase AVS42_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS02675 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS02675 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS42_RS02680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS02680 PF00005 ABC transporter AVS42_RS02690 PF07687 Peptidase dimerisation domain AVS42_RS02690 PF01546 Peptidase family M20/M25/M40 AVS42_RS02700 PF00580 UvrD/REP helicase N-terminal domain AVS42_RS02700 PF13361 UvrD-like helicase C-terminal domain AVS42_RS02705 PF00270 DEAD/DEAH box helicase AVS42_RS02705 PF00271 Helicase conserved C-terminal domain AVS42_RS02705 PF17764 3′ DNA-binding domain (3′BD) AVS42_RS02705 PF18074 Primosomal protein N C-terminal domain AVS42_RS02705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVS42_RS02710 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVS42_RS02720 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVS42_RS02725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS42_RS02725 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS42_RS02730 PF00231 ATP synthase AVS42_RS02735 PF00306 ATP synthase alpha/beta chain, C terminal domain AVS42_RS02735 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS42_RS02735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS42_RS02740 PF00213 ATP synthase delta (OSCP) subunit AVS42_RS02745 PF00430 ATP synthase B/B' CF(0) AVS42_RS02750 PF00137 ATP synthase subunit C AVS42_RS02755 PF00119 ATP synthase A chain AVS42_RS02780 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS02785 PF13180 PDZ domain AVS42_RS02785 PF17820 PDZ domain AVS42_RS02790 PF13192 Thioredoxin domain AVS42_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS02800 PF01171 PP-loop family AVS42_RS02810 PF01842 ACT domain AVS42_RS02810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS42_RS02810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS42_RS02815 PF10411 Disulfide bond isomerase protein N-terminus AVS42_RS02815 PF13098 Thioredoxin-like domain AVS42_RS02820 PF01494 FAD binding domain AVS42_RS02825 PF03562 MltA specific insert domain AVS42_RS02825 PF06725 3D domain AVS42_RS02830 PF04379 ApaG domain AVS42_RS02835 PF00834 Ribulose-phosphate 3 epimerase family AVS42_RS02840 PF13419 Haloacid dehalogenase-like hydrolase AVS42_RS02845 PF04715 Anthranilate synthase component I, N terminal region AVS42_RS02845 PF00425 chorismate binding enzyme AVS42_RS02850 PF00117 Glutamine amidotransferase class-I AVS42_RS02855 PF02885 Glycosyl transferase family, helical bundle domain AVS42_RS02855 PF00591 Glycosyl transferase family, a/b domain AVS42_RS02860 PF00218 Indole-3-glycerol phosphate synthase AVS42_RS02880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS02880 PF18158 Adaptive response protein AidB N-terminal domain AVS42_RS02880 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS02885 PF03466 LysR substrate binding domain AVS42_RS02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS02890 PF00551 Formyl transferase AVS42_RS02900 PF01613 Flavin reductase like domain AVS42_RS02905 PF01243 Pyridoxamine 5'-phosphate oxidase AVS42_RS02905 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVS42_RS02915 PF07690 Major Facilitator Superfamily AVS42_RS02920 PF00899 ThiF family AVS42_RS02925 PF07702 UTRA domain AVS42_RS02925 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS02930 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS02930 PF00501 AMP-binding enzyme AVS42_RS02935 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS02950 PF01063 Amino-transferase class IV AVS42_RS02955 PF04715 Anthranilate synthase component I, N terminal region AVS42_RS02955 PF00425 chorismate binding enzyme AVS42_RS02960 PF17760 UvrA interaction domain AVS42_RS02960 PF17755 UvrA DNA-binding domain AVS42_RS02960 PF00005 ABC transporter AVS42_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS02970 PF03466 LysR substrate binding domain AVS42_RS02975 PF00535 Glycosyl transferase family 2 AVS42_RS02980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS03000 PF12848 ABC transporter AVS42_RS03000 PF00005 ABC transporter AVS42_RS03020 PF03776 Septum formation topological specificity factor MinE AVS42_RS03025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVS42_RS03030 PF03775 Septum formation inhibitor MinC, C-terminal domain AVS42_RS03030 PF05209 Septum formation inhibitor MinC, N-terminal domain AVS42_RS03035 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVS42_RS03035 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AVS42_RS03040 PF01654 Cytochrome bd terminal oxidase subunit I AVS42_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS03050 PF02702 Osmosensitive K+ channel His kinase sensor domain AVS42_RS03050 PF13493 Domain of unknown function (DUF4118) AVS42_RS03055 PF00072 Response regulator receiver domain AVS42_RS03055 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS03070 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS03075 PF04391 Protein of unknown function (DUF533) AVS42_RS03095 PF01476 LysM domain AVS42_RS03095 PF01464 Transglycosylase SLT domain AVS42_RS03100 PF00753 Metallo-beta-lactamase superfamily AVS42_RS03100 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVS42_RS03105 PF08241 Methyltransferase domain AVS42_RS03110 PF00075 RNase H AVS42_RS03120 PF05199 GMC oxidoreductase AVS42_RS03120 PF00732 GMC oxidoreductase AVS42_RS03160 PF01575 MaoC like domain AVS42_RS03165 PF00108 Thiolase, N-terminal domain AVS42_RS03165 PF02803 Thiolase, C-terminal domain AVS42_RS03175 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS03180 PF00106 short chain dehydrogenase AVS42_RS03190 PF00005 ABC transporter AVS42_RS03190 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS03195 PF00005 ABC transporter AVS42_RS03200 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS03210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS03210 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS03210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS03215 PF00440 Bacterial regulatory proteins, tetR family AVS42_RS03215 PF08361 MAATS-type transcriptional repressor, C-terminal region AVS42_RS03220 PF14535 AMP-binding enzyme C-terminal domain AVS42_RS03220 PF00501 AMP-binding enzyme AVS42_RS03225 PF02515 CoA-transferase family III AVS42_RS03245 PF04285 Protein of unknown function (DUF444) AVS42_RS03250 PF04293 SpoVR like protein AVS42_RS03265 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS03270 PF05034 Methylaspartate ammonia-lyase N-terminus AVS42_RS03270 PF07476 Methylaspartate ammonia-lyase C-terminus AVS42_RS03275 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS03275 PF07702 UTRA domain AVS42_RS03290 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS03295 PF09278 MerR, DNA binding AVS42_RS03295 PF00376 MerR family regulatory protein AVS42_RS03300 PF01774 UreD urease accessory protein AVS42_RS03305 PF00547 Urease, gamma subunit AVS42_RS03310 PF04955 HupE / UreJ protein AVS42_RS03315 PF00699 Urease beta subunit AVS42_RS03320 PF01979 Amidohydrolase family AVS42_RS03320 PF00449 Urease alpha-subunit, N-terminal domain AVS42_RS03325 PF02814 UreE urease accessory protein, N-terminal domain AVS42_RS03325 PF05194 UreE urease accessory protein, C-terminal domain AVS42_RS03330 PF01730 UreF AVS42_RS03335 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS42_RS03345 PF07364 Metallopeptidase family M81 AVS42_RS03345 PF07171 MlrC C-terminus AVS42_RS03355 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS03360 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS03365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS03375 PF00202 Aminotransferase class-III AVS42_RS03380 PF00155 Aminotransferase class I and II AVS42_RS03380 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS03385 PF00186 Dihydrofolate reductase AVS42_RS03390 PF00303 Thymidylate synthase AVS42_RS03400 PF03232 Ubiquinone biosynthesis protein COQ7 AVS42_RS03405 PF00953 Glycosyl transferase family 4 AVS42_RS03410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS42_RS03410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS42_RS03410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS42_RS03415 PF01370 NAD dependent epimerase/dehydratase family AVS42_RS03420 PF03023 Lipid II flippase MurJ AVS42_RS03425 PF00534 Glycosyl transferases group 1 AVS42_RS03425 PF13439 Glycosyltransferase Family 4 AVS42_RS03430 PF13537 Glutamine amidotransferase domain AVS42_RS03430 PF00733 Asparagine synthase AVS42_RS03435 PF13439 Glycosyltransferase Family 4 AVS42_RS03435 PF00534 Glycosyl transferases group 1 AVS42_RS03440 PF00534 Glycosyl transferases group 1 AVS42_RS03440 PF13439 Glycosyltransferase Family 4 AVS42_RS03445 PF13477 Glycosyl transferase 4-like AVS42_RS03445 PF00534 Glycosyl transferases group 1 AVS42_RS03450 PF00342 Phosphoglucose isomerase AVS42_RS03455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS42_RS03455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS42_RS03455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS42_RS03455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS42_RS03465 PF02913 FAD linked oxidases, C-terminal domain AVS42_RS03465 PF01565 FAD binding domain AVS42_RS03470 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS03470 PF00072 Response regulator receiver domain AVS42_RS03475 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS03475 PF08521 Two-component sensor kinase N-terminal AVS42_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS03480 PF00884 Sulfatase AVS42_RS03490 PF04209 homogentisate 1,2-dioxygenase AVS42_RS03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS03495 PF03466 LysR substrate binding domain AVS42_RS03505 PF01494 FAD binding domain AVS42_RS03515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVS42_RS03515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVS42_RS03515 PF06827 Zinc finger found in FPG and IleRS AVS42_RS03525 PF03550 Outer membrane lipoprotein LolB AVS42_RS03530 PF00288 GHMP kinases N terminal domain AVS42_RS03530 PF08544 GHMP kinases C terminal AVS42_RS03540 PF14572 Phosphoribosyl synthetase-associated domain AVS42_RS03540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVS42_RS03545 PF01386 Ribosomal L25p family AVS42_RS03545 PF14693 Ribosomal protein TL5, C-terminal domain AVS42_RS03550 PF01195 Peptidyl-tRNA hydrolase AVS42_RS03560 PF06071 Protein of unknown function (DUF933) AVS42_RS03560 PF01926 50S ribosome-binding GTPase AVS42_RS03565 PF13356 Arm DNA-binding domain AVS42_RS03565 PF00589 Phage integrase family AVS42_RS03585 PF01555 DNA methylase AVS42_RS03590 PF13175 AAA ATPase domain AVS42_RS03625 PF13361 UvrD-like helicase C-terminal domain AVS42_RS03625 PF00580 UvrD/REP helicase N-terminal domain AVS42_RS03640 PF12951 Passenger-associated-transport-repeat AVS42_RS03650 PF00072 Response regulator receiver domain AVS42_RS03650 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS03665 PF00440 Bacterial regulatory proteins, tetR family AVS42_RS03665 PF17938 Tetracyclin repressor-like, C-terminal domain AVS42_RS03695 PF01266 FAD dependent oxidoreductase AVS42_RS03710 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS03720 PF01810 LysE type translocator AVS42_RS03765 PF00561 alpha/beta hydrolase fold AVS42_RS03775 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS03780 PF00005 ABC transporter AVS42_RS03780 PF03459 TOBE domain AVS42_RS03785 PF13091 PLD-like domain AVS42_RS03795 PF03167 Uracil DNA glycosylase superfamily AVS42_RS03800 PF00271 Helicase conserved C-terminal domain AVS42_RS03800 PF00270 DEAD/DEAH box helicase AVS42_RS03810 PF01743 Poly A polymerase head domain AVS42_RS03810 PF12627 Probable RNA and SrmB- binding site of polymerase A AVS42_RS03815 PF14718 Soluble lytic murein transglycosylase L domain AVS42_RS03815 PF01464 Transglycosylase SLT domain AVS42_RS03825 PF07690 Major Facilitator Superfamily AVS42_RS03825 PF00083 Sugar (and other) transporter AVS42_RS03830 PF00850 Histone deacetylase domain AVS42_RS03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS03835 PF03466 LysR substrate binding domain AVS42_RS03845 PF02219 Methylenetetrahydrofolate reductase AVS42_RS03850 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AVS42_RS03855 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVS42_RS03855 PF05221 S-adenosyl-L-homocysteine hydrolase AVS42_RS03860 PF00534 Glycosyl transferases group 1 AVS42_RS03860 PF13439 Glycosyltransferase Family 4 AVS42_RS03870 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVS42_RS03870 PF02772 S-adenosylmethionine synthetase, central domain AVS42_RS03870 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVS42_RS03880 PF03279 Bacterial lipid A biosynthesis acyltransferase AVS42_RS03885 PF01678 Diaminopimelate epimerase AVS42_RS03895 PF00589 Phage integrase family AVS42_RS03895 PF02899 Phage integrase, N-terminal SAM-like domain AVS42_RS03900 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS03900 PF00593 TonB dependent receptor AVS42_RS03905 PF03824 High-affinity nickel-transport protein AVS42_RS03915 PF01297 Zinc-uptake complex component A periplasmic AVS42_RS03920 PF00950 ABC 3 transport family AVS42_RS03925 PF00005 ABC transporter AVS42_RS03935 PF01475 Ferric uptake regulator family AVS42_RS03940 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS42_RS03940 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVS42_RS03945 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVS42_RS03950 PF00227 Proteasome subunit AVS42_RS03955 PF07724 AAA domain (Cdc48 subfamily) AVS42_RS03955 PF10431 C-terminal, D2-small domain, of ClpB protein AVS42_RS03955 PF00004 ATPase family associated with various cellular activities (AAA) AVS42_RS03965 PF01923 Cobalamin adenosyltransferase AVS42_RS03980 PF02525 Flavodoxin-like fold AVS42_RS03985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS42_RS03985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS42_RS03995 PF01970 Tripartite tricarboxylate transporter TctA family AVS42_RS04035 PF01790 Prolipoprotein diacylglyceryl transferase AVS42_RS04040 PF00920 Dehydratase family AVS42_RS04045 PF00034 Cytochrome c AVS42_RS04050 PF01625 Peptide methionine sulfoxide reductase AVS42_RS04055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS42_RS04060 PF01037 Lrp/AsnC ligand binding domain AVS42_RS04100 PF07687 Peptidase dimerisation domain AVS42_RS04100 PF01546 Peptidase family M20/M25/M40 AVS42_RS04105 PF01979 Amidohydrolase family AVS42_RS04110 PF12848 ABC transporter AVS42_RS04110 PF16326 ABC transporter C-terminal domain AVS42_RS04110 PF00005 ABC transporter AVS42_RS04120 PF02381 MraZ protein, putative antitoxin-like AVS42_RS04125 PF01795 MraW methylase family AVS42_RS04130 PF04999 Cell division protein FtsL AVS42_RS04135 PF03717 Penicillin-binding Protein dimerisation domain AVS42_RS04135 PF00905 Penicillin binding protein transpeptidase domain AVS42_RS04140 PF08245 Mur ligase middle domain AVS42_RS04140 PF02875 Mur ligase family, glutamate ligase domain AVS42_RS04145 PF00953 Glycosyl transferase family 4 AVS42_RS04150 PF08245 Mur ligase middle domain AVS42_RS04150 PF02875 Mur ligase family, glutamate ligase domain AVS42_RS04155 PF01098 Cell cycle protein AVS42_RS04160 PF03033 Glycosyltransferase family 28 N-terminal domain AVS42_RS04160 PF04101 Glycosyltransferase family 28 C-terminal domain AVS42_RS04165 PF08245 Mur ligase middle domain AVS42_RS04165 PF01225 Mur ligase family, catalytic domain AVS42_RS04165 PF02875 Mur ligase family, glutamate ligase domain AVS42_RS04170 PF01820 D-ala D-ala ligase N-terminus AVS42_RS04170 PF07478 D-ala D-ala ligase C-terminus AVS42_RS04175 PF03799 Cell division protein FtsQ AVS42_RS04175 PF08478 POTRA domain, FtsQ-type AVS42_RS04180 PF02491 SHS2 domain inserted in FTSA AVS42_RS04185 PF00091 Tubulin/FtsZ family, GTPase domain AVS42_RS04185 PF12327 FtsZ family, C-terminal domain AVS42_RS04190 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVS42_RS04200 PF01476 LysM domain AVS42_RS04200 PF01551 Peptidase family M23 AVS42_RS04200 PF08525 Opacity-associated protein A N-terminal motif AVS42_RS04205 PF02810 SEC-C motif AVS42_RS04205 PF07517 SecA DEAD-like domain AVS42_RS04205 PF07516 SecA Wing and Scaffold domain AVS42_RS04205 PF01043 SecA preprotein cross-linking domain AVS42_RS04215 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS04225 PF00106 short chain dehydrogenase AVS42_RS04230 PF01266 FAD dependent oxidoreductase AVS42_RS04235 PF01037 Lrp/AsnC ligand binding domain AVS42_RS04245 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AVS42_RS04255 PF01488 Shikimate / quinate 5-dehydrogenase AVS42_RS04255 PF08501 Shikimate dehydrogenase substrate binding domain AVS42_RS04255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVS42_RS04265 PF00773 RNB domain AVS42_RS04270 PF05728 Uncharacterised protein family (UPF0227) AVS42_RS04275 PF02875 Mur ligase family, glutamate ligase domain AVS42_RS04275 PF01225 Mur ligase family, catalytic domain AVS42_RS04275 PF08245 Mur ligase middle domain AVS42_RS04280 PF08534 Redoxin AVS42_RS04285 PF01220 Dehydroquinase class II AVS42_RS04290 PF00364 Biotin-requiring enzyme AVS42_RS04295 PF00289 Biotin carboxylase, N-terminal domain AVS42_RS04295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS42_RS04295 PF02785 Biotin carboxylase C-terminal domain AVS42_RS04310 PF00294 pfkB family carbohydrate kinase AVS42_RS04335 PF03062 MBOAT, membrane-bound O-acyltransferase family AVS42_RS04340 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS04340 PF00501 AMP-binding enzyme AVS42_RS04355 PF00268 Ribonucleotide reductase, small chain AVS42_RS04360 PF02867 Ribonucleotide reductase, barrel domain AVS42_RS04360 PF03477 ATP cone domain AVS42_RS04360 PF00317 Ribonucleotide reductase, all-alpha domain AVS42_RS04375 PF01037 Lrp/AsnC ligand binding domain AVS42_RS04390 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVS42_RS04395 PF13380 CoA binding domain AVS42_RS04395 PF00583 Acetyltransferase (GNAT) family AVS42_RS04395 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS42_RS04410 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS04410 PF07729 FCD domain AVS42_RS04420 PF00271 Helicase conserved C-terminal domain AVS42_RS04420 PF00270 DEAD/DEAH box helicase AVS42_RS04420 PF03880 DbpA RNA binding domain AVS42_RS04425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS42_RS04430 PF00857 Isochorismatase family AVS42_RS04435 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS04440 PF00005 ABC transporter AVS42_RS04450 PF02230 Phospholipase/Carboxylesterase AVS42_RS04455 PF04751 Protein of unknown function (DUF615) AVS42_RS04460 PF01523 Putative modulator of DNA gyrase AVS42_RS04465 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS04470 PF00572 Ribosomal protein L13 AVS42_RS04475 PF00380 Ribosomal protein S9/S16 AVS42_RS04480 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVS42_RS04480 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVS42_RS04490 PF01521 Iron-sulphur cluster biosynthesis AVS42_RS04495 PF03702 Anhydro-N-acetylmuramic acid kinase AVS42_RS04500 PF08460 Bacterial SH3 domain AVS42_RS04500 PF01551 Peptidase family M23 AVS42_RS04510 PF01479 S4 domain AVS42_RS04510 PF00579 tRNA synthetases class I (W and Y) AVS42_RS04520 PF00464 Serine hydroxymethyltransferase AVS42_RS04525 PF03477 ATP cone domain AVS42_RS04540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS42_RS04540 PF01872 RibD C-terminal domain AVS42_RS04555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS04555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS04555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS04555 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS04555 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS04555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS04565 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS04570 PF03466 LysR substrate binding domain AVS42_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS04575 PF02515 CoA-transferase family III AVS42_RS04595 PF02678 Pirin AVS42_RS04595 PF05726 Pirin C-terminal cupin domain AVS42_RS04610 PF00072 Response regulator receiver domain AVS42_RS04615 PF06481 COX Aromatic Rich Motif AVS42_RS04615 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVS42_RS04620 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS42_RS04625 PF00510 Cytochrome c oxidase subunit III AVS42_RS04630 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVS42_RS04635 PF01022 Bacterial regulatory protein, arsR family AVS42_RS04655 PF05114 Protein of unknown function (DUF692) AVS42_RS04670 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS04670 PF00593 TonB dependent receptor AVS42_RS04685 PF01476 LysM domain AVS42_RS04685 PF01551 Peptidase family M23 AVS42_RS04700 PF04461 Protein of unknown function (DUF520) AVS42_RS04710 PF04542 Sigma-70 region 2 AVS42_RS04710 PF08281 Sigma-70, region 4 AVS42_RS04730 PF00795 Carbon-nitrogen hydrolase AVS42_RS04735 PF01523 Putative modulator of DNA gyrase AVS42_RS04740 PF00793 DAHP synthetase I family AVS42_RS04755 PF13018 Extended Signal Peptide of Type V secretion system AVS42_RS04755 PF13018 Extended Signal Peptide of Type V secretion system AVS42_RS04755 PF05594 Haemagluttinin repeat AVS42_RS04755 PF13332 Hemagglutinin repeat AVS42_RS04755 PF05860 haemagglutination activity domain AVS42_RS04755 PF05860 haemagglutination activity domain AVS42_RS04755 PF05594 Haemagluttinin repeat AVS42_RS04755 PF13332 Hemagglutinin repeat AVS42_RS04760 PF02913 FAD linked oxidases, C-terminal domain AVS42_RS04760 PF01565 FAD binding domain AVS42_RS04765 PF01565 FAD binding domain AVS42_RS04765 PF02913 FAD linked oxidases, C-terminal domain AVS42_RS04770 PF01565 FAD binding domain AVS42_RS04775 PF02754 Cysteine-rich domain AVS42_RS04775 PF13183 4Fe-4S dicluster domain AVS42_RS04780 PF00756 Putative esterase AVS42_RS04785 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS04785 PF00593 TonB dependent receptor AVS42_RS04795 PF02233 NAD(P) transhydrogenase beta subunit AVS42_RS04800 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVS42_RS04805 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVS42_RS04810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVS42_RS04810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVS42_RS04820 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS04825 PF03466 LysR substrate binding domain AVS42_RS04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS04835 PF01925 Sulfite exporter TauE/SafE AVS42_RS04840 PF13417 Glutathione S-transferase, N-terminal domain AVS42_RS04840 PF00043 Glutathione S-transferase, C-terminal domain AVS42_RS04845 PF08328 Adenylosuccinate lyase C-terminal AVS42_RS04845 PF00206 Lyase AVS42_RS04850 PF01322 Cytochrome C' AVS42_RS04870 PF01594 AI-2E family transporter AVS42_RS04880 PF07729 FCD domain AVS42_RS04880 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS04890 PF01425 Amidase AVS42_RS04895 PF02515 CoA-transferase family III AVS42_RS04900 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS04920 PF00005 ABC transporter AVS42_RS04935 PF09339 IclR helix-turn-helix domain AVS42_RS04935 PF01614 Bacterial transcriptional regulator AVS42_RS04945 PF00501 AMP-binding enzyme AVS42_RS04945 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS04950 PF01042 Endoribonuclease L-PSP AVS42_RS04955 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS04970 PF00005 ABC transporter AVS42_RS04975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS42_RS04995 PF03466 LysR substrate binding domain AVS42_RS04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS05005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS42_RS05010 PF07690 Major Facilitator Superfamily AVS42_RS05015 PF03466 LysR substrate binding domain AVS42_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS05030 PF01425 Amidase AVS42_RS05035 PF00677 Lumazine binding domain AVS42_RS05040 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS05045 PF01037 Lrp/AsnC ligand binding domain AVS42_RS05045 PF13404 AsnC-type helix-turn-helix domain AVS42_RS05055 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS05055 PF00501 AMP-binding enzyme AVS42_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS05070 PF00005 ABC transporter AVS42_RS05085 PF08240 Alcohol dehydrogenase GroES-like domain AVS42_RS05085 PF00107 Zinc-binding dehydrogenase AVS42_RS05105 PF00403 Heavy-metal-associated domain AVS42_RS05110 PF01966 HD domain AVS42_RS05115 PF00155 Aminotransferase class I and II AVS42_RS05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS05120 PF03466 LysR substrate binding domain AVS42_RS05130 PF00083 Sugar (and other) transporter AVS42_RS05150 PF13609 Gram-negative porin AVS42_RS05155 PF02548 Ketopantoate hydroxymethyltransferase AVS42_RS05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS05160 PF03466 LysR substrate binding domain AVS42_RS05225 PF00440 Bacterial regulatory proteins, tetR family AVS42_RS05240 PF05170 AsmA family AVS42_RS05245 PF03352 Methyladenine glycosylase AVS42_RS05250 PF09278 MerR, DNA binding AVS42_RS05250 PF00376 MerR family regulatory protein AVS42_RS05265 PF01547 Bacterial extracellular solute-binding protein AVS42_RS05275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS42_RS05275 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS05280 PF00005 ABC transporter AVS42_RS05280 PF08402 TOBE domain AVS42_RS05285 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS05290 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS05290 PF14785 Maltose transport system permease protein MalF P2 domain AVS42_RS05310 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS05315 PF07729 FCD domain AVS42_RS05315 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS05345 PF00465 Iron-containing alcohol dehydrogenase AVS42_RS05360 PF03180 NLPA lipoprotein AVS42_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS05370 PF00005 ABC transporter AVS42_RS05370 PF09383 NIL domain AVS42_RS05375 PF01055 Glycosyl hydrolases family 31 AVS42_RS05375 PF13802 Galactose mutarotase-like AVS42_RS05385 PF00459 Inositol monophosphatase family AVS42_RS05400 PF00501 AMP-binding enzyme AVS42_RS05400 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS05405 PF07687 Peptidase dimerisation domain AVS42_RS05405 PF01546 Peptidase family M20/M25/M40 AVS42_RS05410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS05410 PF03466 LysR substrate binding domain AVS42_RS05415 PF03601 Conserved hypothetical protein 698 AVS42_RS05420 PF03061 Thioesterase superfamily AVS42_RS05425 PF03448 MgtE intracellular N domain AVS42_RS05425 PF00571 CBS domain AVS42_RS05425 PF01769 Divalent cation transporter AVS42_RS05445 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS05455 PF02609 Exonuclease VII small subunit AVS42_RS05460 PF00348 Polyprenyl synthetase AVS42_RS05465 PF02780 Transketolase, C-terminal domain AVS42_RS05465 PF02779 Transketolase, pyrimidine binding domain AVS42_RS05465 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVS42_RS05470 PF02649 Type I GTP cyclohydrolase folE2 AVS42_RS05475 PF01250 Ribosomal protein S6 AVS42_RS05485 PF01084 Ribosomal protein S18 AVS42_RS05490 PF01281 Ribosomal protein L9, N-terminal domain AVS42_RS05490 PF03948 Ribosomal protein L9, C-terminal domain AVS42_RS05500 PF00772 DnaB-like helicase N terminal domain AVS42_RS05500 PF03796 DnaB-like helicase C terminal domain AVS42_RS05505 PF13593 SBF-like CPA transporter family (DUF4137) AVS42_RS05510 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVS42_RS05515 PF13638 PIN domain AVS42_RS05515 PF02562 PhoH-like protein AVS42_RS05520 PF00578 AhpC/TSA family AVS42_RS05525 PF04430 Protein of unknown function (DUF498/DUF598) AVS42_RS05530 PF00155 Aminotransferase class I and II AVS42_RS05535 PF03447 Homoserine dehydrogenase, NAD binding domain AVS42_RS05535 PF01842 ACT domain AVS42_RS05535 PF00742 Homoserine dehydrogenase AVS42_RS05540 PF14821 Threonine synthase N terminus AVS42_RS05540 PF00291 Pyridoxal-phosphate dependent enzyme AVS42_RS05555 PF02615 Malate/L-lactate dehydrogenase AVS42_RS05565 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS05580 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS42_RS05585 PF01649 Ribosomal protein S20 AVS42_RS05595 PF03023 Lipid II flippase MurJ AVS42_RS05600 PF00106 short chain dehydrogenase AVS42_RS05605 PF05191 Adenylate kinase, active site lid AVS42_RS05610 PF02348 Cytidylyltransferase AVS42_RS05615 PF03966 Trm112p-like protein AVS42_RS05620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVS42_RS05625 PF02472 Biopolymer transport protein ExbD/TolR AVS42_RS05630 PF01618 MotA/TolQ/ExbB proton channel family AVS42_RS05640 PF13742 OB-fold nucleic acid binding domain AVS42_RS05640 PF02601 Exonuclease VII, large subunit AVS42_RS05645 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVS42_RS05645 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVS42_RS05650 PF00654 Voltage gated chloride channel AVS42_RS05655 PF02803 Thiolase, C-terminal domain AVS42_RS05655 PF00108 Thiolase, N-terminal domain AVS42_RS05665 PF00313 'Cold-shock' DNA-binding domain AVS42_RS05670 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVS42_RS05675 PF17962 Bacterial macroglobulin domain 6 AVS42_RS05675 PF00207 Alpha-2-macroglobulin family AVS42_RS05675 PF07703 Alpha-2-macroglobulin bait region domain AVS42_RS05675 PF01835 MG2 domain AVS42_RS05675 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AVS42_RS05675 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AVS42_RS05675 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AVS42_RS05675 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AVS42_RS05680 PF06832 Penicillin-Binding Protein C-terminus Family AVS42_RS05680 PF00912 Transglycosylase AVS42_RS05680 PF00905 Penicillin binding protein transpeptidase domain AVS42_RS05685 PF17871 AAA lid domain AVS42_RS05685 PF07724 AAA domain (Cdc48 subfamily) AVS42_RS05685 PF02861 Clp amino terminal domain, pathogenicity island component AVS42_RS05685 PF10431 C-terminal, D2-small domain, of ClpB protein AVS42_RS05685 PF00004 ATPase family associated with various cellular activities (AAA) AVS42_RS05690 PF04403 Paraquat-inducible protein A AVS42_RS05695 PF02470 MlaD protein AVS42_RS05705 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVS42_RS05705 PF14850 DNA-binding domain of Proline dehydrogenase AVS42_RS05705 PF01619 Proline dehydrogenase AVS42_RS05705 PF00171 Aldehyde dehydrogenase family AVS42_RS05715 PF13458 Periplasmic binding protein AVS42_RS05720 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS05725 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS05725 PF11862 Domain of unknown function (DUF3382) AVS42_RS05730 PF00005 ABC transporter AVS42_RS05730 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS05735 PF00005 ABC transporter AVS42_RS05740 PF07690 Major Facilitator Superfamily AVS42_RS05745 PF00440 Bacterial regulatory proteins, tetR family AVS42_RS05755 PF03212 Pertactin AVS42_RS05755 PF03797 Autotransporter beta-domain AVS42_RS05765 PF00543 Nitrogen regulatory protein P-II AVS42_RS05770 PF04380 Membrane fusogenic activity AVS42_RS05785 PF00083 Sugar (and other) transporter AVS42_RS05785 PF07690 Major Facilitator Superfamily AVS42_RS05795 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS42_RS05800 PF00510 Cytochrome c oxidase subunit III AVS42_RS05805 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVS42_RS05810 PF02104 SURF1 family AVS42_RS05835 PF13411 MerR HTH family regulatory protein AVS42_RS05840 PF00403 Heavy-metal-associated domain AVS42_RS05860 PF06968 Biotin and Thiamin Synthesis associated domain AVS42_RS05860 PF04055 Radical SAM superfamily AVS42_RS05875 PF08534 Redoxin AVS42_RS05885 PF01738 Dienelactone hydrolase family AVS42_RS05895 PF01967 MoaC family AVS42_RS05905 PF02391 MoaE protein AVS42_RS05910 PF00994 Probable molybdopterin binding domain AVS42_RS05915 PF03454 MoeA C-terminal region (domain IV) AVS42_RS05915 PF03453 MoeA N-terminal region (domain I and II) AVS42_RS05915 PF00994 Probable molybdopterin binding domain AVS42_RS05920 PF06463 Molybdenum Cofactor Synthesis C AVS42_RS05920 PF04055 Radical SAM superfamily AVS42_RS05940 PF14698 Argininosuccinate lyase C-terminal AVS42_RS05940 PF00206 Lyase AVS42_RS05945 PF00924 Mechanosensitive ion channel AVS42_RS05950 PF02540 NAD synthase AVS42_RS05950 PF00795 Carbon-nitrogen hydrolase AVS42_RS05955 PF00543 Nitrogen regulatory protein P-II AVS42_RS05980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS05980 PF03466 LysR substrate binding domain AVS42_RS05990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS05995 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS06000 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS42_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS06005 PF03193 RsgA GTPase AVS42_RS06010 PF01435 Peptidase family M48 AVS42_RS06015 PF00929 Exonuclease AVS42_RS06020 PF03853 YjeF-related protein N-terminus AVS42_RS06025 PF07848 PaaX-like protein AVS42_RS06025 PF08223 PaaX-like protein C-terminal domain AVS42_RS06030 PF05138 Phenylacetic acid catabolic protein AVS42_RS06035 PF06243 Phenylacetic acid degradation B AVS42_RS06040 PF05138 Phenylacetic acid catabolic protein AVS42_RS06045 PF01883 Iron-sulfur cluster assembly protein AVS42_RS06050 PF00970 Oxidoreductase FAD-binding domain AVS42_RS06050 PF00175 Oxidoreductase NAD-binding domain AVS42_RS06050 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS06060 PF00171 Aldehyde dehydrogenase family AVS42_RS06065 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS06070 PF03061 Thioesterase superfamily AVS42_RS06075 PF14535 AMP-binding enzyme C-terminal domain AVS42_RS06075 PF00501 AMP-binding enzyme AVS42_RS06080 PF16970 Type-1 fimbrial protein, A AVS42_RS06090 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS06095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS06095 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS42_RS06100 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS42_RS06105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVS42_RS06105 PF02769 AIR synthase related protein, C-terminal domain AVS42_RS06105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AVS42_RS06110 PF05594 Haemagluttinin repeat AVS42_RS06110 PF05860 haemagglutination activity domain AVS42_RS06110 PF13018 Extended Signal Peptide of Type V secretion system AVS42_RS06110 PF13332 Hemagglutinin repeat AVS42_RS06135 PF00596 Class II Aldolase and Adducin N-terminal domain AVS42_RS06140 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS06145 PF01242 6-pyruvoyl tetrahydropterin synthase AVS42_RS06155 PF00472 RF-1 domain AVS42_RS06175 PF00701 Dihydrodipicolinate synthetase family AVS42_RS06180 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS06205 PF00890 FAD binding domain AVS42_RS06205 PF14537 Cytochrome c3 AVS42_RS06210 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS06225 PF01266 FAD dependent oxidoreductase AVS42_RS06225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVS42_RS06230 PF08220 DeoR-like helix-turn-helix domain AVS42_RS06230 PF00455 DeoR C terminal sensor domain AVS42_RS06235 PF17912 MalK OB fold domain AVS42_RS06235 PF00005 ABC transporter AVS42_RS06240 PF00005 ABC transporter AVS42_RS06240 PF17912 MalK OB fold domain AVS42_RS06250 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS06275 PF01037 Lrp/AsnC ligand binding domain AVS42_RS06280 PF01266 FAD dependent oxidoreductase AVS42_RS06285 PF12320 Type 5 capsule protein repressor C-terminal domain AVS42_RS06285 PF00149 Calcineurin-like phosphoesterase AVS42_RS06325 PF00571 CBS domain AVS42_RS06325 PF00478 IMP dehydrogenase / GMP reductase domain AVS42_RS06330 PF00958 GMP synthase C terminal domain AVS42_RS06330 PF00117 Glutamine amidotransferase class-I AVS42_RS06330 PF02540 NAD synthase AVS42_RS06345 PF13657 HipA N-terminal domain AVS42_RS06345 PF07804 HipA-like C-terminal domain AVS42_RS06355 PF07690 Major Facilitator Superfamily AVS42_RS06370 PF01979 Amidohydrolase family AVS42_RS06380 PF00005 ABC transporter AVS42_RS06385 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS06410 PF01965 DJ-1/PfpI family AVS42_RS06420 PF00916 Sulfate permease family AVS42_RS06420 PF01740 STAS domain AVS42_RS06425 PF00753 Metallo-beta-lactamase superfamily AVS42_RS06425 PF10996 Beta-Casp domain AVS42_RS06425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVS42_RS06445 PF12706 Beta-lactamase superfamily domain AVS42_RS06450 PF01965 DJ-1/PfpI family AVS42_RS06450 PF12833 Helix-turn-helix domain AVS42_RS06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS06455 PF03466 LysR substrate binding domain AVS42_RS06470 PF00107 Zinc-binding dehydrogenase AVS42_RS06470 PF08240 Alcohol dehydrogenase GroES-like domain AVS42_RS06475 PF07690 Major Facilitator Superfamily AVS42_RS06480 PF00155 Aminotransferase class I and II AVS42_RS06480 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS06490 PF01810 LysE type translocator AVS42_RS06500 PF07687 Peptidase dimerisation domain AVS42_RS06500 PF01546 Peptidase family M20/M25/M40 AVS42_RS06505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS06510 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS06515 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS42_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS06520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS06520 PF00005 ABC transporter AVS42_RS06525 PF00356 Bacterial regulatory proteins, lacI family AVS42_RS06555 PF09335 SNARE associated Golgi protein AVS42_RS06570 PF13847 Methyltransferase domain AVS42_RS06585 PF00155 Aminotransferase class I and II AVS42_RS06585 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS06595 PF00692 dUTPase AVS42_RS06610 PF01632 Ribosomal protein L35 AVS42_RS06615 PF00453 Ribosomal protein L20 AVS42_RS06620 PF01409 tRNA synthetases class II core domain (F) AVS42_RS06620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVS42_RS06625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVS42_RS06625 PF01588 Putative tRNA binding domain AVS42_RS06625 PF03147 Ferredoxin-fold anticodon binding domain AVS42_RS06625 PF03483 B3/4 domain AVS42_RS06625 PF03484 tRNA synthetase B5 domain AVS42_RS06630 PF00216 Bacterial DNA-binding protein AVS42_RS06680 PF04231 Endonuclease I AVS42_RS06700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS42_RS06700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS42_RS06705 PF04381 Putative exonuclease, RdgC AVS42_RS06715 PF02515 CoA-transferase family III AVS42_RS06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS06720 PF03466 LysR substrate binding domain AVS42_RS06740 PF00106 short chain dehydrogenase AVS42_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS06755 PF08402 TOBE domain AVS42_RS06755 PF00005 ABC transporter AVS42_RS06760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS42_RS06760 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS06760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS42_RS06765 PF08946 Osmosensory transporter coiled coil AVS42_RS06765 PF00083 Sugar (and other) transporter AVS42_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS06770 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS06775 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS06775 PF00072 Response regulator receiver domain AVS42_RS06780 PF00154 recA bacterial DNA recombination protein AVS42_RS06785 PF02631 RecX family AVS42_RS06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS06790 PF03466 LysR substrate binding domain AVS42_RS06795 PF01717 Cobalamin-independent synthase, Catalytic domain AVS42_RS06795 PF08267 Cobalamin-independent synthase, N-terminal domain AVS42_RS06805 PF00549 CoA-ligase AVS42_RS06805 PF08442 ATP-grasp domain AVS42_RS06810 PF02629 CoA binding domain AVS42_RS06810 PF00549 CoA-ligase AVS42_RS06815 PF03741 Integral membrane protein TerC family AVS42_RS06820 PF03741 Integral membrane protein TerC family AVS42_RS06825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVS42_RS06825 PF03900 Porphobilinogen deaminase, C-terminal domain AVS42_RS06845 PF00719 Inorganic pyrophosphatase AVS42_RS06850 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS42_RS06885 PF13629 Pilus formation protein N terminal region AVS42_RS06885 PF00263 Bacterial type II and III secretion system protein AVS42_RS06885 PF04972 BON domain AVS42_RS06890 PF00437 Type II/IV secretion system protein AVS42_RS06910 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS06915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVS42_RS06915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVS42_RS06920 PF02615 Malate/L-lactate dehydrogenase AVS42_RS06925 PF03466 LysR substrate binding domain AVS42_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS06935 PF01266 FAD dependent oxidoreductase AVS42_RS06940 PF04267 Sarcosine oxidase, delta subunit family AVS42_RS06945 PF17806 Sarcosine oxidase A3 domain AVS42_RS06945 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS06945 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVS42_RS06945 PF01571 Aminomethyltransferase folate-binding domain AVS42_RS06955 PF00551 Formyl transferase AVS42_RS06960 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS06970 PF00561 alpha/beta hydrolase fold AVS42_RS06980 PF01565 FAD binding domain AVS42_RS06980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVS42_RS06985 PF05173 Dihydrodipicolinate reductase, C-terminus AVS42_RS06985 PF01113 Dihydrodipicolinate reductase, N-terminus AVS42_RS06990 PF04355 SmpA / OmlA family AVS42_RS06995 PF01475 Ferric uptake regulator family AVS42_RS07000 PF02463 RecF/RecN/SMC N terminal domain AVS42_RS07005 PF01513 ATP-NAD kinase AVS42_RS07010 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AVS42_RS07010 PF01628 HrcA protein C terminal domain AVS42_RS07015 PF00762 Ferrochelatase AVS42_RS07025 PF01025 GrpE AVS42_RS07035 PF00012 Hsp70 protein AVS42_RS07040 PF01556 DnaJ C terminal domain AVS42_RS07040 PF00226 DnaJ domain AVS42_RS07040 PF00684 DnaJ central domain AVS42_RS07045 PF05193 Peptidase M16 inactive domain AVS42_RS07045 PF00675 Insulinase (Peptidase family M16) AVS42_RS07065 PF17862 AAA+ lid domain AVS42_RS07065 PF00004 ATPase family associated with various cellular activities (AAA) AVS42_RS07065 PF01434 Peptidase family M41 AVS42_RS07075 PF00034 Cytochrome c AVS42_RS07090 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS42_RS07110 PF00072 Response regulator receiver domain AVS42_RS07110 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS07120 PF02669 K+-transporting ATPase, c chain AVS42_RS07130 PF03814 Potassium-transporting ATPase A subunit AVS42_RS07145 PF00474 Sodium:solute symporter family AVS42_RS07160 PF00893 Small Multidrug Resistance protein AVS42_RS07165 PF00488 MutS domain V AVS42_RS07165 PF01713 Smr domain AVS42_RS07170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS07175 PF17854 FtsK alpha domain AVS42_RS07175 PF01580 FtsK/SpoIIIE family AVS42_RS07175 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVS42_RS07175 PF09397 Ftsk gamma domain AVS42_RS07180 PF03548 Outer membrane lipoprotein carrier protein LolA AVS42_RS07185 PF12002 MgsA AAA+ ATPase C terminal AVS42_RS07185 PF16193 AAA C-terminal domain AVS42_RS07185 PF00004 ATPase family associated with various cellular activities (AAA) AVS42_RS07190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS42_RS07190 PF02403 Seryl-tRNA synthetase N-terminal domain AVS42_RS07215 PF00990 Diguanylate cyclase, GGDEF domain AVS42_RS07215 PF17151 Periplasmic sensor domain AVS42_RS07230 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS07230 PF07660 Secretin and TonB N terminus short domain AVS42_RS07230 PF00593 TonB dependent receptor AVS42_RS07235 PF07690 Major Facilitator Superfamily AVS42_RS07255 PF06276 Ferric iron reductase FhuF-like transporter AVS42_RS07255 PF04183 IucA / IucC family AVS42_RS07265 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AVS42_RS07275 PF00999 Sodium/hydrogen exchanger family AVS42_RS07275 PF02254 TrkA-N domain AVS42_RS07280 PF00106 short chain dehydrogenase AVS42_RS07290 PF03883 Peroxide stress protein YaaA AVS42_RS07300 PF12805 FUSC-like inner membrane protein yccS AVS42_RS07310 PF00990 Diguanylate cyclase, GGDEF domain AVS42_RS07320 PF06969 HemN C-terminal domain AVS42_RS07320 PF04055 Radical SAM superfamily AVS42_RS07330 PF00196 Bacterial regulatory proteins, luxR family AVS42_RS07335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVS42_RS07335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS42_RS07335 PF02824 TGS domain AVS42_RS07335 PF03129 Anticodon binding domain AVS42_RS07340 PF05198 Translation initiation factor IF-3, N-terminal domain AVS42_RS07340 PF00707 Translation initiation factor IF-3, C-terminal domain AVS42_RS07345 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVS42_RS07345 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVS42_RS07355 PF00381 PTS HPr component phosphorylation site AVS42_RS07360 PF05524 PEP-utilising enzyme, N-terminal AVS42_RS07360 PF00391 PEP-utilising enzyme, mobile domain AVS42_RS07360 PF02896 PEP-utilising enzyme, TIM barrel domain AVS42_RS07370 PF02566 OsmC-like protein AVS42_RS07375 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVS42_RS07385 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS07390 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS07395 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS07400 PF00005 ABC transporter AVS42_RS07415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS42_RS07415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS42_RS07425 PF02293 AmiS/UreI family transporter AVS42_RS07430 PF03069 Acetamidase/Formamidase family AVS42_RS07445 PF01116 Fructose-bisphosphate aldolase class-II AVS42_RS07455 PF01259 SAICAR synthetase AVS42_RS07460 PF15723 Motility quorum-sensing regulator, toxin of MqsA AVS42_RS07465 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AVS42_RS07475 PF02600 Disulfide bond formation protein DsbB AVS42_RS07480 PF00731 AIR carboxylase AVS42_RS07485 PF02222 ATP-grasp domain AVS42_RS07485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVS42_RS07490 PF01300 Telomere recombination AVS42_RS07490 PF03481 Putative GTP-binding controlling metal-binding AVS42_RS07495 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS07500 PF01614 Bacterial transcriptional regulator AVS42_RS07500 PF09339 IclR helix-turn-helix domain AVS42_RS07505 PF00491 Arginase family AVS42_RS07510 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS07520 PF00005 ABC transporter AVS42_RS07525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS07525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS07535 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS07535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS07535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS07540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS07540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS07540 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS07545 PF03466 LysR substrate binding domain AVS42_RS07550 PF02899 Phage integrase, N-terminal SAM-like domain AVS42_RS07550 PF00589 Phage integrase family AVS42_RS07555 PF04073 Aminoacyl-tRNA editing domain AVS42_RS07560 PF01174 SNO glutamine amidotransferase family AVS42_RS07575 PF00768 D-alanyl-D-alanine carboxypeptidase AVS42_RS07585 PF07690 Major Facilitator Superfamily AVS42_RS07595 PF12705 PD-(D/E)XK nuclease superfamily AVS42_RS07595 PF13361 UvrD-like helicase C-terminal domain AVS42_RS07595 PF00580 UvrD/REP helicase N-terminal domain AVS42_RS07610 PF12169 DNA polymerase III subunits gamma and tau domain III AVS42_RS07610 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AVS42_RS07610 PF12170 DNA polymerase III tau subunit V interacting with alpha AVS42_RS07615 PF02575 YbaB/EbfC DNA-binding family AVS42_RS07620 PF02132 RecR protein AVS42_RS07620 PF13662 Toprim domain AVS42_RS07640 PF04228 Putative neutral zinc metallopeptidase AVS42_RS07645 PF01300 Telomere recombination AVS42_RS07685 PF03358 NADPH-dependent FMN reductase AVS42_RS07690 PF07311 Dodecin AVS42_RS07695 PF05192 MutS domain III AVS42_RS07695 PF05190 MutS family domain IV AVS42_RS07695 PF00488 MutS domain V AVS42_RS07695 PF01624 MutS domain I AVS42_RS07695 PF05188 MutS domain II AVS42_RS07700 PF08007 Cupin superfamily protein AVS42_RS07705 PF16970 Type-1 fimbrial protein, A AVS42_RS07710 PF06804 NlpB/DapX lipoprotein AVS42_RS07715 PF00701 Dihydrodipicolinate synthetase family AVS42_RS07720 PF17820 PDZ domain AVS42_RS07720 PF02163 Peptidase family M50 AVS42_RS07735 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS07745 PF00005 ABC transporter AVS42_RS07750 PF02824 TGS domain AVS42_RS07750 PF04607 Region found in RelA / SpoT proteins AVS42_RS07750 PF13291 ACT domain AVS42_RS07755 PF01192 RNA polymerase Rpb6 AVS42_RS07760 PF00625 Guanylate kinase AVS42_RS07765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS42_RS07770 PF00034 Cytochrome c AVS42_RS07780 PF00877 NlpC/P60 family AVS42_RS07785 PF01048 Phosphorylase superfamily AVS42_RS07785 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AVS42_RS07805 PF03755 YicC-like family, N-terminal region AVS42_RS07805 PF08340 Domain of unknown function (DUF1732) AVS42_RS07810 PF01138 3' exoribonuclease family, domain 1 AVS42_RS07810 PF03725 3' exoribonuclease family, domain 2 AVS42_RS07820 PF03466 LysR substrate binding domain AVS42_RS07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS07825 PF02203 Tar ligand binding domain homologue AVS42_RS07825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS42_RS07825 PF00672 HAMP domain AVS42_RS07830 PF00990 Diguanylate cyclase, GGDEF domain AVS42_RS07830 PF17154 Gammaproteobacterial periplasmic sensor domain AVS42_RS07830 PF00672 HAMP domain AVS42_RS07830 PF00563 EAL domain AVS42_RS07835 PF01725 Ham1 family AVS42_RS07845 PF06969 HemN C-terminal domain AVS42_RS07845 PF04055 Radical SAM superfamily AVS42_RS07850 PF00120 Glutamine synthetase, catalytic domain AVS42_RS07850 PF03951 Glutamine synthetase, beta-Grasp domain AVS42_RS07855 PF00989 PAS fold AVS42_RS07855 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS07860 PF02954 Bacterial regulatory protein, Fis family AVS42_RS07860 PF00072 Response regulator receiver domain AVS42_RS07860 PF00158 Sigma-54 interaction domain AVS42_RS07865 PF03466 LysR substrate binding domain AVS42_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS07870 PF02678 Pirin AVS42_RS07870 PF17954 Quercetinase C-terminal cupin domain AVS42_RS07875 PF02678 Pirin AVS42_RS07875 PF05726 Pirin C-terminal cupin domain AVS42_RS07885 PF08402 TOBE domain AVS42_RS07885 PF00005 ABC transporter AVS42_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS07900 PF00175 Oxidoreductase NAD-binding domain AVS42_RS07900 PF00970 Oxidoreductase FAD-binding domain AVS42_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS07905 PF03466 LysR substrate binding domain AVS42_RS07915 PF00248 Aldo/keto reductase family AVS42_RS07925 PF01042 Endoribonuclease L-PSP AVS42_RS07930 PF00271 Helicase conserved C-terminal domain AVS42_RS07930 PF00270 DEAD/DEAH box helicase AVS42_RS07930 PF17191 RecG wedge domain AVS42_RS07935 PF03466 LysR substrate binding domain AVS42_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS07940 PF03466 LysR substrate binding domain AVS42_RS07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS07945 PF00171 Aldehyde dehydrogenase family AVS42_RS07950 PF00210 Ferritin-like domain AVS42_RS07970 PF00535 Glycosyl transferase family 2 AVS42_RS07980 PF00005 ABC transporter AVS42_RS07990 PF00534 Glycosyl transferases group 1 AVS42_RS08000 PF02563 Polysaccharide biosynthesis/export protein AVS42_RS08005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS42_RS08005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS42_RS08005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS42_RS08010 PF01370 NAD dependent epimerase/dehydratase family AVS42_RS08015 PF05159 Capsule polysaccharide biosynthesis protein AVS42_RS08020 PF05159 Capsule polysaccharide biosynthesis protein AVS42_RS08030 PF00106 short chain dehydrogenase AVS42_RS08045 PF14759 Reductase C-terminal AVS42_RS08045 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS08055 PF00005 ABC transporter AVS42_RS08060 PF00005 ABC transporter AVS42_RS08060 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS08065 PF11862 Domain of unknown function (DUF3382) AVS42_RS08065 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS08075 PF03741 Integral membrane protein TerC family AVS42_RS08085 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS08100 PF07726 ATPase family associated with various cellular activities (AAA) AVS42_RS08100 PF17863 AAA lid domain AVS42_RS08135 PF00884 Sulfatase AVS42_RS08160 PF00196 Bacterial regulatory proteins, luxR family AVS42_RS08160 PF00072 Response regulator receiver domain AVS42_RS08165 PF03797 Autotransporter beta-domain AVS42_RS08165 PF12951 Passenger-associated-transport-repeat AVS42_RS08165 PF00082 Subtilase family AVS42_RS08170 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AVS42_RS08175 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AVS42_RS08180 PF02798 Glutathione S-transferase, N-terminal domain AVS42_RS08180 PF00043 Glutathione S-transferase, C-terminal domain AVS42_RS08185 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS42_RS08190 PF03466 LysR substrate binding domain AVS42_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS08195 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS08205 PF01070 FMN-dependent dehydrogenase AVS42_RS08210 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS42_RS08225 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS08230 PF03466 LysR substrate binding domain AVS42_RS08230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS08235 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS08260 PF03358 NADPH-dependent FMN reductase AVS42_RS08280 PF07969 Amidohydrolase family AVS42_RS08285 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS08295 PF03466 LysR substrate binding domain AVS42_RS08310 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS08315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVS42_RS08315 PF00361 Proton-conducting membrane transporter AVS42_RS08315 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AVS42_RS08315 PF13244 Domain of unknown function (DUF4040) AVS42_RS08320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVS42_RS08325 PF00361 Proton-conducting membrane transporter AVS42_RS08330 PF01899 Na+/H+ ion antiporter subunit AVS42_RS08335 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AVS42_RS08360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS42_RS08365 PF17676 LD-carboxypeptidase C-terminal domain AVS42_RS08365 PF02016 LD-carboxypeptidase N-terminal domain AVS42_RS08370 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS08375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS08385 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS08390 PF00005 ABC transporter AVS42_RS08390 PF12848 ABC transporter AVS42_RS08395 PF00005 ABC transporter AVS42_RS08425 PF00970 Oxidoreductase FAD-binding domain AVS42_RS08425 PF00175 Oxidoreductase NAD-binding domain AVS42_RS08425 PF00042 Globin AVS42_RS08430 PF02082 Transcriptional regulator AVS42_RS08435 PF01266 FAD dependent oxidoreductase AVS42_RS08450 PF01571 Aminomethyltransferase folate-binding domain AVS42_RS08455 PF02618 YceG-like family AVS42_RS08460 PF02223 Thymidylate kinase AVS42_RS08465 PF12169 DNA polymerase III subunits gamma and tau domain III AVS42_RS08470 PF01026 TatD related DNase AVS42_RS08485 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS08495 PF00005 ABC transporter AVS42_RS08500 PF00491 Arginase family AVS42_RS08505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVS42_RS08505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVS42_RS08510 PF00171 Aldehyde dehydrogenase family AVS42_RS08515 PF01546 Peptidase family M20/M25/M40 AVS42_RS08515 PF07687 Peptidase dimerisation domain AVS42_RS08520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS08520 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS08520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS08530 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS42_RS08530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS08540 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS08540 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS42_RS08545 PF07729 FCD domain AVS42_RS08545 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS08555 PF04343 Protein of unknown function, DUF488 AVS42_RS08560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS42_RS08580 PF01425 Amidase AVS42_RS08585 PF07286 Protein of unknown function (DUF1445) AVS42_RS08595 PF00989 PAS fold AVS42_RS08595 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS08595 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS08595 PF01627 Hpt domain AVS42_RS08595 PF00072 Response regulator receiver domain AVS42_RS08600 PF00196 Bacterial regulatory proteins, luxR family AVS42_RS08600 PF00072 Response regulator receiver domain AVS42_RS08605 PF05594 Haemagluttinin repeat AVS42_RS08605 PF13332 Hemagglutinin repeat AVS42_RS08605 PF05860 haemagglutination activity domain AVS42_RS08605 PF13018 Extended Signal Peptide of Type V secretion system AVS42_RS08610 PF16970 Type-1 fimbrial protein, A AVS42_RS08615 PF02753 Pili assembly chaperone PapD, C-terminal domain AVS42_RS08615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AVS42_RS08620 PF13953 PapC C-terminal domain AVS42_RS08620 PF13954 PapC N-terminal domain AVS42_RS08620 PF00577 Outer membrane usher protein AVS42_RS08625 PF00419 Fimbrial protein AVS42_RS08630 PF08479 POTRA domain, ShlB-type AVS42_RS08630 PF17287 POTRA domain AVS42_RS08630 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AVS42_RS08645 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS08670 PF03466 LysR substrate binding domain AVS42_RS08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS08680 PF01968 Hydantoinase/oxoprolinase AVS42_RS08680 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS42_RS08695 PF05552 Conserved TM helix AVS42_RS08695 PF00924 Mechanosensitive ion channel AVS42_RS08705 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS08710 PF00588 SpoU rRNA Methylase family AVS42_RS08715 PF00459 Inositol monophosphatase family AVS42_RS08720 PF03471 Transporter associated domain AVS42_RS08720 PF03741 Integral membrane protein TerC family AVS42_RS08725 PF02673 Bacitracin resistance protein BacA AVS42_RS08730 PF00149 Calcineurin-like phosphoesterase AVS42_RS08735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVS42_RS08745 PF09190 DALR domain AVS42_RS08745 PF01406 tRNA synthetases class I (C) catalytic domain AVS42_RS08750 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS42_RS08750 PF12833 Helix-turn-helix domain AVS42_RS08750 PF06029 AlkA N-terminal domain AVS42_RS08750 PF02805 Metal binding domain of Ada AVS42_RS08755 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVS42_RS08765 PF01171 PP-loop family AVS42_RS08765 PF09179 TilS substrate binding domain AVS42_RS08770 PF13840 ACT domain AVS42_RS08770 PF01842 ACT domain AVS42_RS08770 PF00696 Amino acid kinase family AVS42_RS08795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS42_RS08795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS42_RS08800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS08800 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS42_RS08805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS08810 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS08815 PF00561 alpha/beta hydrolase fold AVS42_RS08820 PF01958 Domain of unknown function DUF108 AVS42_RS08820 PF03447 Homoserine dehydrogenase, NAD binding domain AVS42_RS08835 PF03466 LysR substrate binding domain AVS42_RS08835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS08855 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS08860 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS08865 PF00005 ABC transporter AVS42_RS08865 PF08402 TOBE domain AVS42_RS08875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS42_RS08875 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS08880 PF09339 IclR helix-turn-helix domain AVS42_RS08880 PF01614 Bacterial transcriptional regulator AVS42_RS08885 PF13380 CoA binding domain AVS42_RS08890 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS08895 PF01042 Endoribonuclease L-PSP AVS42_RS08920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS42_RS08930 PF00535 Glycosyl transferase family 2 AVS42_RS08935 PF14883 Hypothetical glycosyl hydrolase family 13 AVS42_RS08935 PF01522 Polysaccharide deacetylase AVS42_RS08955 PF12802 MarR family AVS42_RS08960 PF00072 Response regulator receiver domain AVS42_RS08960 PF00196 Bacterial regulatory proteins, luxR family AVS42_RS08970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS42_RS08970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS42_RS08970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS42_RS08970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS42_RS08975 PF00342 Phosphoglucose isomerase AVS42_RS08980 PF00132 Bacterial transferase hexapeptide (six repeats) AVS42_RS08990 PF02146 Sir2 family AVS42_RS08995 PF00459 Inositol monophosphatase family AVS42_RS09000 PF00171 Aldehyde dehydrogenase family AVS42_RS09005 PF00202 Aminotransferase class-III AVS42_RS09010 PF00155 Aminotransferase class I and II AVS42_RS09010 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS09020 PF00580 UvrD/REP helicase N-terminal domain AVS42_RS09020 PF13361 UvrD-like helicase C-terminal domain AVS42_RS09025 PF01544 CorA-like Mg2+ transporter protein AVS42_RS09035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS09040 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS09045 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS42_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS09050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS09050 PF00005 ABC transporter AVS42_RS09055 PF01047 MarR family AVS42_RS09070 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AVS42_RS09070 PF08479 POTRA domain, ShlB-type AVS42_RS09075 PF03707 Bacterial signalling protein N terminal repeat AVS42_RS09075 PF00990 Diguanylate cyclase, GGDEF domain AVS42_RS09075 PF00563 EAL domain AVS42_RS09105 PF04972 BON domain AVS42_RS09105 PF13629 Pilus formation protein N terminal region AVS42_RS09105 PF00263 Bacterial type II and III secretion system protein AVS42_RS09115 PF00437 Type II/IV secretion system protein AVS42_RS09145 PF00072 Response regulator receiver domain AVS42_RS09145 PF00158 Sigma-54 interaction domain AVS42_RS09145 PF02954 Bacterial regulatory protein, Fis family AVS42_RS09160 PF08281 Sigma-70, region 4 AVS42_RS09160 PF04542 Sigma-70 region 2 AVS42_RS09170 PF00034 Cytochrome c AVS42_RS09175 PF09285 Elongation factor P, C-terminal AVS42_RS09175 PF01132 Elongation factor P (EF-P) OB domain AVS42_RS09175 PF08207 Elongation factor P (EF-P) KOW-like domain AVS42_RS09190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVS42_RS09195 PF00330 Aconitase family (aconitate hydratase) AVS42_RS09195 PF00694 Aconitase C-terminal domain AVS42_RS09205 PF00593 TonB dependent receptor AVS42_RS09205 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS09220 PF00691 OmpA family AVS42_RS09230 PF06434 Aconitate hydratase 2 N-terminus AVS42_RS09230 PF11791 Aconitate B N-terminal domain AVS42_RS09230 PF00330 Aconitase family (aconitate hydratase) AVS42_RS09255 PF00892 EamA-like transporter family AVS42_RS09260 PF01925 Sulfite exporter TauE/SafE AVS42_RS09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS09280 PF03466 LysR substrate binding domain AVS42_RS09285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVS42_RS09285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVS42_RS09295 PF03466 LysR substrate binding domain AVS42_RS09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS09340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS42_RS09340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS42_RS09345 PF01425 Amidase AVS42_RS09355 PF00171 Aldehyde dehydrogenase family AVS42_RS09370 PF00133 tRNA synthetases class I (I, L, M and V) AVS42_RS09370 PF13603 Leucyl-tRNA synthetase, Domain 2 AVS42_RS09370 PF08264 Anticodon-binding domain of tRNA AVS42_RS09370 PF09334 tRNA synthetases class I (M) AVS42_RS09375 PF07690 Major Facilitator Superfamily AVS42_RS09380 PF01047 MarR family AVS42_RS09400 PF01740 STAS domain AVS42_RS09400 PF00916 Sulfate permease family AVS42_RS09405 PF00471 Ribosomal protein L33 AVS42_RS09410 PF00830 Ribosomal L28 family AVS42_RS09415 PF07690 Major Facilitator Superfamily AVS42_RS09440 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS09445 PF01522 Polysaccharide deacetylase AVS42_RS09455 PF01425 Amidase AVS42_RS09460 PF01425 Amidase AVS42_RS09495 PF01152 Bacterial-like globin AVS42_RS09520 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS09540 PF02803 Thiolase, C-terminal domain AVS42_RS09540 PF00108 Thiolase, N-terminal domain AVS42_RS09545 PF14535 AMP-binding enzyme C-terminal domain AVS42_RS09545 PF00501 AMP-binding enzyme AVS42_RS09550 PF07859 alpha/beta hydrolase fold AVS42_RS09555 PF02515 CoA-transferase family III AVS42_RS09560 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS09570 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS09575 PF00866 Ring hydroxylating beta subunit AVS42_RS09580 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS42_RS09580 PF00355 Rieske [2Fe-2S] domain AVS42_RS09585 PF13458 Periplasmic binding protein AVS42_RS09590 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS09595 PF11862 Domain of unknown function (DUF3382) AVS42_RS09595 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS09610 PF00463 Isocitrate lyase family AVS42_RS09615 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AVS42_RS09615 PF14489 QueF-like protein AVS42_RS09630 PF01066 CDP-alcohol phosphatidyltransferase AVS42_RS09635 PF08459 UvrC Helix-hairpin-helix N-terminal AVS42_RS09635 PF02151 UvrB/uvrC motif AVS42_RS09635 PF01541 GIY-YIG catalytic domain AVS42_RS09640 PF00933 Glycosyl hydrolase family 3 N terminal domain AVS42_RS09645 PF01648 4'-phosphopantetheinyl transferase superfamily AVS42_RS09650 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVS42_RS09655 PF02321 Outer membrane efflux protein AVS42_RS09655 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AVS42_RS09660 PF00873 AcrB/AcrD/AcrF family AVS42_RS09665 PF00529 HlyD membrane-fusion protein of T1SS AVS42_RS09665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS42_RS09685 PF03459 TOBE domain AVS42_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS09690 PF00005 ABC transporter AVS42_RS09705 PF00080 Copper/zinc superoxide dismutase (SODC) AVS42_RS09710 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS09720 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS09730 PF07729 FCD domain AVS42_RS09730 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS09740 PF02803 Thiolase, C-terminal domain AVS42_RS09740 PF00108 Thiolase, N-terminal domain AVS42_RS09745 PF01361 Tautomerase enzyme AVS42_RS09750 PF00571 CBS domain AVS42_RS09750 PF00005 ABC transporter AVS42_RS09755 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS09780 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS09780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS42_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS09805 PF03466 LysR substrate binding domain AVS42_RS09815 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS09815 PF01799 [2Fe-2S] binding domain AVS42_RS09820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS42_RS09830 PF06719 AraC-type transcriptional regulator N-terminus AVS42_RS09830 PF12833 Helix-turn-helix domain AVS42_RS09850 PF07690 Major Facilitator Superfamily AVS42_RS09865 PF00583 Acetyltransferase (GNAT) family AVS42_RS09875 PF00664 ABC transporter transmembrane region AVS42_RS09875 PF00005 ABC transporter AVS42_RS09885 PF02535 ZIP Zinc transporter AVS42_RS09900 PF01740 STAS domain AVS42_RS09900 PF00916 Sulfate permease family AVS42_RS09920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVS42_RS09920 PF03625 Domain of unknown function DUF302 AVS42_RS09930 PF12833 Helix-turn-helix domain AVS42_RS09930 PF02805 Metal binding domain of Ada AVS42_RS09935 PF07237 Protein of unknown function (DUF1428) AVS42_RS09940 PF02567 Phenazine biosynthesis-like protein AVS42_RS09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS09945 PF03466 LysR substrate binding domain AVS42_RS09950 PF04286 Protein of unknown function (DUF445) AVS42_RS09965 PF00171 Aldehyde dehydrogenase family AVS42_RS09970 PF01590 GAF domain AVS42_RS09970 PF00158 Sigma-54 interaction domain AVS42_RS09970 PF02954 Bacterial regulatory protein, Fis family AVS42_RS09995 PF03788 LrgA family AVS42_RS10000 PF13649 Methyltransferase domain AVS42_RS10010 PF00155 Aminotransferase class I and II AVS42_RS10015 PF00202 Aminotransferase class-III AVS42_RS10050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS42_RS10050 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVS42_RS10055 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVS42_RS10055 PF12801 4Fe-4S binding domain AVS42_RS10055 PF13746 4Fe-4S dicluster domain AVS42_RS10080 PF00005 ABC transporter AVS42_RS10085 PF01061 ABC-2 type transporter AVS42_RS10090 PF01594 AI-2E family transporter AVS42_RS10120 PF04546 Sigma-70, non-essential region AVS42_RS10120 PF04539 Sigma-70 region 3 AVS42_RS10120 PF04542 Sigma-70 region 2 AVS42_RS10120 PF03979 Sigma-70 factor, region 1.1 AVS42_RS10120 PF00140 Sigma-70 factor, region 1.2 AVS42_RS10120 PF04545 Sigma-70, region 4 AVS42_RS10125 PF01807 CHC2 zinc finger AVS42_RS10125 PF08278 DNA primase DnaG DnaB-binding AVS42_RS10125 PF10410 DnaB-helicase binding domain of primase AVS42_RS10125 PF08275 DNA primase catalytic core, N-terminal domain AVS42_RS10130 PF01165 Ribosomal protein S21 AVS42_RS10135 PF00156 Phosphoribosyl transferase domain AVS42_RS10140 PF00709 Adenylosuccinate synthetase AVS42_RS10145 PF13393 Histidyl-tRNA synthetase AVS42_RS10150 PF01145 SPFH domain / Band 7 family AVS42_RS10155 PF12221 Bacterial membrane protein N terminal AVS42_RS10155 PF01145 SPFH domain / Band 7 family AVS42_RS10160 PF16360 GTP-binding GTPase Middle Region AVS42_RS10160 PF13167 GTP-binding GTPase N-terminal AVS42_RS10160 PF01926 50S ribosome-binding GTPase AVS42_RS10165 PF17209 Hfq protein AVS42_RS10170 PF00155 Aminotransferase class I and II AVS42_RS10175 PF01926 50S ribosome-binding GTPase AVS42_RS10175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVS42_RS10180 PF13360 PQQ-like domain AVS42_RS10185 PF09976 Tetratricopeptide repeat-like domain AVS42_RS10190 PF03129 Anticodon binding domain AVS42_RS10190 PF13393 Histidyl-tRNA synthetase AVS42_RS10195 PF04551 GcpE protein AVS42_RS10205 PF04055 Radical SAM superfamily AVS42_RS10210 PF00334 Nucleoside diphosphate kinase AVS42_RS10215 PF08264 Anticodon-binding domain of tRNA AVS42_RS10215 PF00133 tRNA synthetases class I (I, L, M and V) AVS42_RS10215 PF10458 Valyl tRNA synthetase tRNA binding arm AVS42_RS10225 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS10225 PF00072 Response regulator receiver domain AVS42_RS10230 PF08521 Two-component sensor kinase N-terminal AVS42_RS10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS10230 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS10250 PF00266 Aminotransferase class-V AVS42_RS10255 PF01746 tRNA (Guanine-1)-methyltransferase AVS42_RS10260 PF01782 RimM N-terminal domain AVS42_RS10265 PF00886 Ribosomal protein S16 AVS42_RS10275 PF01206 Sulfurtransferase TusA AVS42_RS10280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVS42_RS10280 PF01411 tRNA synthetases class II (A) AVS42_RS10280 PF02272 DHHA1 domain AVS42_RS10325 PF01425 Amidase AVS42_RS10330 PF00005 ABC transporter AVS42_RS10330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS10335 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS10340 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS10345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS10365 PF03466 LysR substrate binding domain AVS42_RS10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS10370 PF13416 Bacterial extracellular solute-binding protein AVS42_RS10375 PF01266 FAD dependent oxidoreductase AVS42_RS10380 PF00175 Oxidoreductase NAD-binding domain AVS42_RS10380 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS10380 PF00970 Oxidoreductase FAD-binding domain AVS42_RS10385 PF02261 Aspartate decarboxylase AVS42_RS10400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVS42_RS10405 PF17042 Nucleotide-binding C-terminal domain AVS42_RS10405 PF07005 Sugar-binding N-terminal domain AVS42_RS10410 PF03812 2-keto-3-deoxygluconate permease AVS42_RS10420 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS10430 PF02142 MGS-like domain AVS42_RS10435 PF04384 Iron-sulphur cluster assembly AVS42_RS10440 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS10445 PF00012 Hsp70 protein AVS42_RS10450 PF07743 HSCB C-terminal oligomerisation domain AVS42_RS10455 PF01521 Iron-sulphur cluster biosynthesis AVS42_RS10460 PF01592 NifU-like N terminal domain AVS42_RS10465 PF00266 Aminotransferase class-V AVS42_RS10470 PF02082 Transcriptional regulator AVS42_RS10475 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVS42_RS10480 PF00271 Helicase conserved C-terminal domain AVS42_RS10480 PF17757 UvrB interaction domain AVS42_RS10480 PF04851 Type III restriction enzyme, res subunit AVS42_RS10480 PF02151 UvrB/uvrC motif AVS42_RS10480 PF12344 Ultra-violet resistance protein B AVS42_RS10485 PF00155 Aminotransferase class I and II AVS42_RS10490 PF01726 LexA DNA binding domain AVS42_RS10490 PF00717 Peptidase S24-like AVS42_RS10495 PF03212 Pertactin AVS42_RS10495 PF03797 Autotransporter beta-domain AVS42_RS10520 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS10525 PF01144 Coenzyme A transferase AVS42_RS10530 PF01144 Coenzyme A transferase AVS42_RS10540 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS10540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS10540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS10550 PF02803 Thiolase, C-terminal domain AVS42_RS10550 PF00108 Thiolase, N-terminal domain AVS42_RS10560 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS10565 PF01575 MaoC like domain AVS42_RS10570 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS10575 PF02515 CoA-transferase family III AVS42_RS10580 PF03466 LysR substrate binding domain AVS42_RS10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS10585 PF00004 ATPase family associated with various cellular activities (AAA) AVS42_RS10585 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVS42_RS10585 PF05362 Lon protease (S16) C-terminal proteolytic domain AVS42_RS10590 PF07724 AAA domain (Cdc48 subfamily) AVS42_RS10590 PF10431 C-terminal, D2-small domain, of ClpB protein AVS42_RS10590 PF06689 ClpX C4-type zinc finger AVS42_RS10595 PF00574 Clp protease AVS42_RS10600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVS42_RS10600 PF05698 Bacterial trigger factor protein (TF) C-terminus AVS42_RS10600 PF05697 Bacterial trigger factor protein (TF) AVS42_RS10605 PF03350 Uncharacterized protein family, UPF0114 AVS42_RS10620 PF00313 'Cold-shock' DNA-binding domain AVS42_RS10655 PF14602 Hexapeptide repeat of succinyl-transferase AVS42_RS10655 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVS42_RS10655 PF00132 Bacterial transferase hexapeptide (six repeats) AVS42_RS10660 PF07687 Peptidase dimerisation domain AVS42_RS10660 PF01546 Peptidase family M20/M25/M40 AVS42_RS10665 PF05175 Methyltransferase small domain AVS42_RS10670 PF00005 ABC transporter AVS42_RS10670 PF12848 ABC transporter AVS42_RS10675 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS10680 PF13361 UvrD-like helicase C-terminal domain AVS42_RS10680 PF00580 UvrD/REP helicase N-terminal domain AVS42_RS10700 PF00551 Formyl transferase AVS42_RS10705 PF06574 FAD synthetase AVS42_RS10705 PF01687 Riboflavin kinase AVS42_RS10710 PF08264 Anticodon-binding domain of tRNA AVS42_RS10710 PF06827 Zinc finger found in FPG and IleRS AVS42_RS10710 PF00133 tRNA synthetases class I (I, L, M and V) AVS42_RS10715 PF01252 Signal peptidase (SPase) II AVS42_RS10720 PF04127 DNA / pantothenate metabolism flavoprotein AVS42_RS10720 PF02441 Flavoprotein AVS42_RS10730 PF01037 Lrp/AsnC ligand binding domain AVS42_RS10750 PF13406 Transglycosylase SLT domain AVS42_RS10755 PF04305 Protein of unknown function (DUF455) AVS42_RS10775 PF08443 RimK-like ATP-grasp domain AVS42_RS10775 PF08245 Mur ligase middle domain AVS42_RS10775 PF02875 Mur ligase family, glutamate ligase domain AVS42_RS10780 PF08245 Mur ligase middle domain AVS42_RS10780 PF02875 Mur ligase family, glutamate ligase domain AVS42_RS10780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS42_RS10785 PF05532 CsbD-like AVS42_RS10795 PF04972 BON domain AVS42_RS10810 PF00005 ABC transporter AVS42_RS10815 PF13472 GDSL-like Lipase/Acylhydrolase family AVS42_RS10820 PF13145 PPIC-type PPIASE domain AVS42_RS10825 PF03009 Glycerophosphoryl diester phosphodiesterase family AVS42_RS10830 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AVS42_RS10835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS42_RS10835 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS10840 PF00462 Glutaredoxin AVS42_RS10840 PF08534 Redoxin AVS42_RS10850 PF09278 MerR, DNA binding AVS42_RS10850 PF00376 MerR family regulatory protein AVS42_RS10855 PF05958 tRNA (Uracil-5-)-methyltransferase AVS42_RS10875 PF01551 Peptidase family M23 AVS42_RS10875 PF01476 LysM domain AVS42_RS10885 PF01975 Survival protein SurE AVS42_RS10890 PF02660 Glycerol-3-phosphate acyltransferase AVS42_RS10900 PF00814 Glycoprotease family AVS42_RS10905 PF00860 Permease family AVS42_RS10915 PF00085 Thioredoxin AVS42_RS10920 PF01205 Uncharacterized protein family UPF0029 AVS42_RS10930 PF00583 Acetyltransferase (GNAT) family AVS42_RS10935 PF12802 MarR family AVS42_RS10945 PF00202 Aminotransferase class-III AVS42_RS10950 PF16868 NMT1-like family AVS42_RS10970 PF03797 Autotransporter beta-domain AVS42_RS10980 PF13091 PLD-like domain AVS42_RS10980 PF13396 Phospholipase_D-nuclease N-terminal AVS42_RS10985 PF01740 STAS domain AVS42_RS10990 PF13581 Histidine kinase-like ATPase domain AVS42_RS10995 PF01168 Alanine racemase, N-terminal domain AVS42_RS10995 PF00842 Alanine racemase, C-terminal domain AVS42_RS11005 PF07228 Stage II sporulation protein E (SpoIIE) AVS42_RS11005 PF00672 HAMP domain AVS42_RS11030 PF04542 Sigma-70 region 2 AVS42_RS11030 PF08281 Sigma-70, region 4 AVS42_RS11035 PF00263 Bacterial type II and III secretion system protein AVS42_RS11035 PF03958 Bacterial type II/III secretion system short domain AVS42_RS11045 PF01312 FlhB HrpN YscU SpaS Family AVS42_RS11050 PF01311 Bacterial export proteins, family 1 AVS42_RS11055 PF01313 Bacterial export proteins, family 3 AVS42_RS11060 PF00813 FliP family AVS42_RS11065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS42_RS11080 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS42_RS11080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS42_RS11080 PF18269 T3SS EscN ATPase C-terminal domain AVS42_RS11085 PF02108 Flagellar assembly protein FliH AVS42_RS11095 PF01514 Secretory protein of YscJ/FliF family AVS42_RS11160 PF00771 FHIPEP family AVS42_RS11190 PF01272 Transcription elongation factor, GreA/GreB, C-term AVS42_RS11190 PF03449 Transcription elongation factor, N-terminal AVS42_RS11195 PF00672 HAMP domain AVS42_RS11195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS42_RS11195 PF02203 Tar ligand binding domain homologue AVS42_RS11200 PF00860 Permease family AVS42_RS11220 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS11230 PF13419 Haloacid dehalogenase-like hydrolase AVS42_RS11235 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS11240 PF00005 ABC transporter AVS42_RS11240 PF08402 TOBE domain AVS42_RS11245 PF03466 LysR substrate binding domain AVS42_RS11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS11255 PF00581 Rhodanese-like domain AVS42_RS11265 PF01435 Peptidase family M48 AVS42_RS11270 PF08240 Alcohol dehydrogenase GroES-like domain AVS42_RS11270 PF00107 Zinc-binding dehydrogenase AVS42_RS11275 PF00892 EamA-like transporter family AVS42_RS11285 PF01047 MarR family AVS42_RS11295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS42_RS11295 PF00529 HlyD membrane-fusion protein of T1SS AVS42_RS11300 PF07690 Major Facilitator Superfamily AVS42_RS11305 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS42_RS11310 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS11310 PF00155 Aminotransferase class I and II AVS42_RS11315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS11325 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS11325 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS42_RS11330 PF00005 ABC transporter AVS42_RS11330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS11340 PF00202 Aminotransferase class-III AVS42_RS11345 PF07883 Cupin domain AVS42_RS11350 PF00850 Histone deacetylase domain AVS42_RS11355 PF07687 Peptidase dimerisation domain AVS42_RS11355 PF01546 Peptidase family M20/M25/M40 AVS42_RS11365 PF00171 Aldehyde dehydrogenase family AVS42_RS11370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS42_RS11375 PF00202 Aminotransferase class-III AVS42_RS11380 PF01235 Sodium:alanine symporter family AVS42_RS11385 PF05872 Bacterial protein of unknown function (DUF853) AVS42_RS11390 PF01709 Transcriptional regulator AVS42_RS11395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVS42_RS11395 PF02844 Phosphoribosylglycinamide synthetase, N domain AVS42_RS11395 PF02843 Phosphoribosylglycinamide synthetase, C domain AVS42_RS11400 PF01218 Coproporphyrinogen III oxidase AVS42_RS11405 PF01467 Cytidylyltransferase-like AVS42_RS11415 PF02590 Predicted SPOUT methyltransferase AVS42_RS11420 PF02545 Maf-like protein AVS42_RS11425 PF03797 Autotransporter beta-domain AVS42_RS11425 PF03212 Pertactin AVS42_RS11465 PF00575 S1 RNA binding domain AVS42_RS11465 PF10150 Ribonuclease E/G family AVS42_RS11470 PF00800 Prephenate dehydratase AVS42_RS11470 PF01842 ACT domain AVS42_RS11480 PF07690 Major Facilitator Superfamily AVS42_RS11485 PF00005 ABC transporter AVS42_RS11485 PF00664 ABC transporter transmembrane region AVS42_RS11490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS42_RS11500 PF03692 Putative zinc- or iron-chelating domain AVS42_RS11515 PF00884 Sulfatase AVS42_RS11520 PF00534 Glycosyl transferases group 1 AVS42_RS11520 PF13439 Glycosyltransferase Family 4 AVS42_RS11525 PF00535 Glycosyl transferase family 2 AVS42_RS11530 PF01522 Polysaccharide deacetylase AVS42_RS11535 PF13439 Glycosyltransferase Family 4 AVS42_RS11535 PF00534 Glycosyl transferases group 1 AVS42_RS11540 PF14579 Helix-hairpin-helix motif AVS42_RS11540 PF02811 PHP domain AVS42_RS11540 PF01336 OB-fold nucleic acid binding domain AVS42_RS11540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVS42_RS11540 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVS42_RS11550 PF11898 Domain of unknown function (DUF3418) AVS42_RS11550 PF04408 Helicase associated domain (HA2) AVS42_RS11550 PF00271 Helicase conserved C-terminal domain AVS42_RS11550 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AVS42_RS11550 PF00270 DEAD/DEAH box helicase AVS42_RS11555 PF00696 Amino acid kinase family AVS42_RS11555 PF00583 Acetyltransferase (GNAT) family AVS42_RS11560 PF04362 Bacterial Fe(2+) trafficking AVS42_RS11565 PF04185 Phosphoesterase family AVS42_RS11565 PF05506 Domain of unknown function (DUF756) AVS42_RS11570 PF01895 PhoU domain AVS42_RS11575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVS42_RS11580 PF18158 Adaptive response protein AidB N-terminal domain AVS42_RS11580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS11580 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS11585 PF02646 RmuC family AVS42_RS11595 PF02245 Methylpurine-DNA glycosylase (MPG) AVS42_RS11605 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS11615 PF00005 ABC transporter AVS42_RS11615 PF08402 TOBE domain AVS42_RS11620 PF13416 Bacterial extracellular solute-binding protein AVS42_RS11640 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS11650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS11650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS42_RS11670 PF00285 Citrate synthase, C-terminal domain AVS42_RS11675 PF03937 Flavinator of succinate dehydrogenase AVS42_RS11680 PF13085 2Fe-2S iron-sulfur cluster binding domain AVS42_RS11685 PF00890 FAD binding domain AVS42_RS11685 PF02910 Fumarate reductase flavoprotein C-term AVS42_RS11690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVS42_RS11695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVS42_RS11700 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS11700 PF07702 UTRA domain AVS42_RS11705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVS42_RS11705 PF00056 lactate/malate dehydrogenase, NAD binding domain AVS42_RS11715 PF00285 Citrate synthase, C-terminal domain AVS42_RS11720 PF00330 Aconitase family (aconitate hydratase) AVS42_RS11720 PF00694 Aconitase C-terminal domain AVS42_RS11725 PF04303 PrpF protein AVS42_RS11730 PF03972 MmgE/PrpD family AVS42_RS11735 PF03653 Uncharacterised protein family (UPF0093) AVS42_RS11740 PF02926 THUMP domain AVS42_RS11740 PF01170 Putative RNA methylase family UPF0020 AVS42_RS11760 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS42_RS11760 PF00501 AMP-binding enzyme AVS42_RS11760 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS11770 PF01430 Hsp33 protein AVS42_RS11795 PF00211 Adenylate and Guanylate cyclase catalytic domain AVS42_RS11800 PF04977 Septum formation initiator AVS42_RS11805 PF03952 Enolase, N-terminal domain AVS42_RS11805 PF00113 Enolase, C-terminal TIM barrel domain AVS42_RS11815 PF00793 DAHP synthetase I family AVS42_RS11820 PF00117 Glutamine amidotransferase class-I AVS42_RS11820 PF06418 CTP synthase N-terminus AVS42_RS11830 PF00557 Metallopeptidase family M24 AVS42_RS11830 PF01321 Creatinase/Prolidase N-terminal domain AVS42_RS11840 PF03576 Peptidase family S58 AVS42_RS11845 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS42_RS11845 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS11850 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS11855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS11860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS11860 PF00005 ABC transporter AVS42_RS11865 PF01112 Asparaginase AVS42_RS11875 PF01144 Coenzyme A transferase AVS42_RS11895 PF16363 GDP-mannose 4,6 dehydratase AVS42_RS11910 PF01212 Beta-eliminating lyase AVS42_RS11915 PF00892 EamA-like transporter family AVS42_RS11920 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS42_RS11920 PF00501 AMP-binding enzyme AVS42_RS11920 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS11930 PF03928 Haem-degrading AVS42_RS11935 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS42_RS11935 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS11935 PF00501 AMP-binding enzyme AVS42_RS11940 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS11940 PF00501 AMP-binding enzyme AVS42_RS11940 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS42_RS11945 PF00877 NlpC/P60 family AVS42_RS11960 PF03466 LysR substrate binding domain AVS42_RS11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS11965 PF00171 Aldehyde dehydrogenase family AVS42_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS11975 PF03466 LysR substrate binding domain AVS42_RS11985 PF02789 Cytosol aminopeptidase family, N-terminal domain AVS42_RS11985 PF00883 Cytosol aminopeptidase family, catalytic domain AVS42_RS11990 PF04364 DNA polymerase III chi subunit, HolC AVS42_RS12000 PF01027 Inhibitor of apoptosis-promoting Bax1 AVS42_RS12005 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS12015 PF00291 Pyridoxal-phosphate dependent enzyme AVS42_RS12025 PF11967 Recombination protein O N terminal AVS42_RS12025 PF02565 Recombination protein O C terminal AVS42_RS12030 PF07650 KH domain AVS42_RS12030 PF01926 50S ribosome-binding GTPase AVS42_RS12035 PF14622 Ribonuclease-III-like AVS42_RS12035 PF00035 Double-stranded RNA binding motif AVS42_RS12040 PF10502 Signal peptidase, peptidase S26 AVS42_RS12045 PF00679 Elongation factor G C-terminus AVS42_RS12045 PF06421 GTP-binding protein LepA C-terminus AVS42_RS12045 PF03144 Elongation factor Tu domain 2 AVS42_RS12045 PF00009 Elongation factor Tu GTP binding domain AVS42_RS12050 PF13180 PDZ domain AVS42_RS12065 PF04542 Sigma-70 region 2 AVS42_RS12065 PF08281 Sigma-70, region 4 AVS42_RS12075 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS42_RS12075 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS42_RS12080 PF00550 Phosphopantetheine attachment site AVS42_RS12090 PF00698 Acyl transferase domain AVS42_RS12095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVS42_RS12095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVS42_RS12100 PF02504 Fatty acid synthesis protein AVS42_RS12105 PF01783 Ribosomal L32p protein family AVS42_RS12110 PF02620 Large ribosomal RNA subunit accumulation protein YceD AVS42_RS12115 PF02545 Maf-like protein AVS42_RS12125 PF01510 N-acetylmuramoyl-L-alanine amidase AVS42_RS12130 PF12805 FUSC-like inner membrane protein yccS AVS42_RS12140 PF03883 Peroxide stress protein YaaA AVS42_RS12155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVS42_RS12160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS12170 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS12175 PF01416 tRNA pseudouridine synthase AVS42_RS12185 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVS42_RS12185 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVS42_RS12190 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS42_RS12195 PF00694 Aconitase C-terminal domain AVS42_RS12200 PF00330 Aconitase family (aconitate hydratase) AVS42_RS12205 PF12849 PBP superfamily domain AVS42_RS12210 PF00005 ABC transporter AVS42_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS12240 PF13247 4Fe-4S dicluster domain AVS42_RS12245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVS42_RS12245 PF01568 Molydopterin dinucleotide binding domain AVS42_RS12245 PF00384 Molybdopterin oxidoreductase AVS42_RS12275 PF10609 NUBPL iron-transfer P-loop NTPase AVS42_RS12280 PF12804 MobA-like NTP transferase domain AVS42_RS12285 PF00994 Probable molybdopterin binding domain AVS42_RS12285 PF03454 MoeA C-terminal region (domain IV) AVS42_RS12285 PF03453 MoeA N-terminal region (domain I and II) AVS42_RS12290 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AVS42_RS12295 PF01435 Peptidase family M48 AVS42_RS12300 PF01264 Chorismate synthase AVS42_RS12305 PF00563 EAL domain AVS42_RS12305 PF00990 Diguanylate cyclase, GGDEF domain AVS42_RS12305 PF08447 PAS fold AVS42_RS12305 PF08448 PAS fold AVS42_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS12325 PF00005 ABC transporter AVS42_RS12325 PF08402 TOBE domain AVS42_RS12330 PF03466 LysR substrate binding domain AVS42_RS12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS12335 PF00300 Histidine phosphatase superfamily (branch 1) AVS42_RS12345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS42_RS12345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVS42_RS12345 PF02142 MGS-like domain AVS42_RS12350 PF00117 Glutamine amidotransferase class-I AVS42_RS12350 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVS42_RS12355 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVS42_RS12380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS42_RS12380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS42_RS12385 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS12390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS12390 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS12390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS12395 PF03658 RnfH family Ubiquitin AVS42_RS12400 PF03364 Polyketide cyclase / dehydrase and lipid transport AVS42_RS12410 PF01668 SmpB protein AVS42_RS12415 PF00990 Diguanylate cyclase, GGDEF domain AVS42_RS12415 PF08448 PAS fold AVS42_RS12420 PF01145 SPFH domain / Band 7 family AVS42_RS12420 PF16200 C-terminal region of band_7 AVS42_RS12435 PF00117 Glutamine amidotransferase class-I AVS42_RS12435 PF00958 GMP synthase C terminal domain AVS42_RS12440 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVS42_RS12440 PF00391 PEP-utilising enzyme, mobile domain AVS42_RS12440 PF02896 PEP-utilising enzyme, TIM barrel domain AVS42_RS12445 PF03618 Kinase/pyrophosphorylase AVS42_RS12450 PF00588 SpoU rRNA Methylase family AVS42_RS12450 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVS42_RS12455 PF01351 Ribonuclease HII AVS42_RS12460 PF02684 Lipid-A-disaccharide synthetase AVS42_RS12465 PF00132 Bacterial transferase hexapeptide (six repeats) AVS42_RS12465 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVS42_RS12470 PF07977 FabA-like domain AVS42_RS12475 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVS42_RS12475 PF00132 Bacterial transferase hexapeptide (six repeats) AVS42_RS12480 PF03938 Outer membrane protein (OmpH-like) AVS42_RS12485 PF01103 Surface antigen AVS42_RS12485 PF07244 Surface antigen variable number repeat AVS42_RS12490 PF02163 Peptidase family M50 AVS42_RS12490 PF17820 PDZ domain AVS42_RS12495 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVS42_RS12495 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVS42_RS12495 PF13288 DXP reductoisomerase C-terminal domain AVS42_RS12505 PF01255 Putative undecaprenyl diphosphate synthase AVS42_RS12510 PF01765 Ribosome recycling factor AVS42_RS12515 PF00696 Amino acid kinase family AVS42_RS12520 PF00889 Elongation factor TS AVS42_RS12525 PF00318 Ribosomal protein S2 AVS42_RS12530 PF00557 Metallopeptidase family M24 AVS42_RS12535 PF01909 Nucleotidyltransferase domain AVS42_RS12535 PF01966 HD domain AVS42_RS12535 PF08335 GlnD PII-uridylyltransferase AVS42_RS12550 PF00156 Phosphoribosyl transferase domain AVS42_RS12565 PF08245 Mur ligase middle domain AVS42_RS12565 PF02875 Mur ligase family, glutamate ligase domain AVS42_RS12575 PF02465 Flagellar hook-associated protein 2 N-terminus AVS42_RS12575 PF07195 Flagellar hook-associated protein 2 C-terminus AVS42_RS12575 PF07196 Flagellin hook IN motif AVS42_RS12580 PF02561 Flagellar protein FliS AVS42_RS12600 PF01312 FlhB HrpN YscU SpaS Family AVS42_RS12610 PF02049 Flagellar hook-basal body complex protein FliE AVS42_RS12615 PF01514 Secretory protein of YscJ/FliF family AVS42_RS12615 PF08345 Flagellar M-ring protein C-terminal AVS42_RS12620 PF14842 FliG N-terminal domain AVS42_RS12620 PF01706 FliG C-terminal domain AVS42_RS12620 PF14841 FliG middle domain AVS42_RS12630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS42_RS12630 PF18269 T3SS EscN ATPase C-terminal domain AVS42_RS12655 PF03748 Flagellar basal body-associated protein FliL AVS42_RS12660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS42_RS12660 PF02154 Flagellar motor switch protein FliM AVS42_RS12665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS42_RS12665 PF16973 Flagellar motor switch protein FliN N-terminal AVS42_RS12670 PF04347 Flagellar biosynthesis protein, FliO AVS42_RS12675 PF00813 FliP family AVS42_RS12680 PF01313 Bacterial export proteins, family 3 AVS42_RS12685 PF01311 Bacterial export proteins, family 1 AVS42_RS12695 PF08447 PAS fold AVS42_RS12695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS42_RS12700 PF02203 Tar ligand binding domain homologue AVS42_RS12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS42_RS12700 PF00672 HAMP domain AVS42_RS12705 PF02203 Tar ligand binding domain homologue AVS42_RS12705 PF00672 HAMP domain AVS42_RS12705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS42_RS12710 PF00669 Bacterial flagellin N-terminal helical region AVS42_RS12715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS42_RS12715 PF00460 Flagella basal body rod protein AVS42_RS12720 PF10135 Rod binding protein AVS42_RS12720 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVS42_RS12725 PF02119 Flagellar P-ring protein AVS42_RS12730 PF02107 Flagellar L-ring protein AVS42_RS12735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS42_RS12735 PF00460 Flagella basal body rod protein AVS42_RS12740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS42_RS12740 PF00460 Flagella basal body rod protein AVS42_RS12745 PF07559 Flagellar basal body protein FlaE AVS42_RS12745 PF00460 Flagella basal body rod protein AVS42_RS12745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS42_RS12750 PF13861 FlgD Tudor-like domain AVS42_RS12750 PF03963 Flagellar hook capping protein - N-terminal region AVS42_RS12750 PF13860 FlgD Ig-like domain AVS42_RS12755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS42_RS12755 PF00460 Flagella basal body rod protein AVS42_RS12760 PF00460 Flagella basal body rod protein AVS42_RS12770 PF04316 Anti-sigma-28 factor, FlgM AVS42_RS12780 PF00448 SRP54-type protein, GTPase domain AVS42_RS12790 PF01312 FlhB HrpN YscU SpaS Family AVS42_RS12800 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS12805 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS12810 PF00005 ABC transporter AVS42_RS12820 PF08546 Ketopantoate reductase PanE/ApbA C terminal AVS42_RS12820 PF02558 Ketopantoate reductase PanE/ApbA AVS42_RS12825 PF13378 Enolase C-terminal domain-like AVS42_RS12830 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS12840 PF00694 Aconitase C-terminal domain AVS42_RS12845 PF00356 Bacterial regulatory proteins, lacI family AVS42_RS12850 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS12855 PF02515 CoA-transferase family III AVS42_RS12865 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS12870 PF13380 CoA binding domain AVS42_RS12870 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS42_RS12875 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS12875 PF07729 FCD domain AVS42_RS12880 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS42_RS12890 PF03466 LysR substrate binding domain AVS42_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS12900 PF12951 Passenger-associated-transport-repeat AVS42_RS12910 PF03551 Transcriptional regulator PadR-like family AVS42_RS12920 PF03372 Endonuclease/Exonuclease/phosphatase family AVS42_RS12925 PF13091 PLD-like domain AVS42_RS12940 PF03706 Lysylphosphatidylglycerol synthase TM region AVS42_RS12970 PF11896 Domain of unknown function (DUF3416) AVS42_RS12970 PF00128 Alpha amylase, catalytic domain AVS42_RS12975 PF16657 Maltogenic Amylase, C-terminal domain AVS42_RS12975 PF00128 Alpha amylase, catalytic domain AVS42_RS12980 PF00128 Alpha amylase, catalytic domain AVS42_RS12980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS42_RS12980 PF02806 Alpha amylase, C-terminal all-beta domain AVS42_RS12985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS42_RS12985 PF00128 Alpha amylase, catalytic domain AVS42_RS12990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS42_RS12990 PF11941 Domain of unknown function (DUF3459) AVS42_RS12990 PF00128 Alpha amylase, catalytic domain AVS42_RS13000 PF00128 Alpha amylase, catalytic domain AVS42_RS13010 PF08543 Phosphomethylpyrimidine kinase AVS42_RS13015 PF01168 Alanine racemase, N-terminal domain AVS42_RS13020 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS13020 PF00155 Aminotransferase class I and II AVS42_RS13035 PF00582 Universal stress protein family AVS42_RS13040 PF00248 Aldo/keto reductase family AVS42_RS13050 PF16485 Protealysin propeptide AVS42_RS13050 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVS42_RS13050 PF01447 Thermolysin metallopeptidase, catalytic domain AVS42_RS13055 PF07681 DoxX AVS42_RS13075 PF00578 AhpC/TSA family AVS42_RS13080 PF03960 ArsC family AVS42_RS13085 PF02515 CoA-transferase family III AVS42_RS13105 PF00255 Glutathione peroxidase AVS42_RS13110 PF02798 Glutathione S-transferase, N-terminal domain AVS42_RS13110 PF00043 Glutathione S-transferase, C-terminal domain AVS42_RS13135 PF02666 Phosphatidylserine decarboxylase AVS42_RS13140 PF01070 FMN-dependent dehydrogenase AVS42_RS13145 PF03180 NLPA lipoprotein AVS42_RS13150 PF08808 RES domain AVS42_RS13160 PF04241 Protein of unknown function (DUF423) AVS42_RS13180 PF13458 Periplasmic binding protein AVS42_RS13185 PF00005 ABC transporter AVS42_RS13185 PF17912 MalK OB fold domain AVS42_RS13190 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS13195 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS13200 PF13416 Bacterial extracellular solute-binding protein AVS42_RS13205 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVS42_RS13205 PF03807 NADP oxidoreductase coenzyme F420-dependent AVS42_RS13210 PF02592 Putative vitamin uptake transporter AVS42_RS13220 PF13458 Periplasmic binding protein AVS42_RS13225 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS13230 PF11862 Domain of unknown function (DUF3382) AVS42_RS13230 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS13235 PF00005 ABC transporter AVS42_RS13235 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS13240 PF00005 ABC transporter AVS42_RS13245 PF01177 Asp/Glu/Hydantoin racemase AVS42_RS13260 PF00892 EamA-like transporter family AVS42_RS13270 PF04235 Protein of unknown function (DUF418) AVS42_RS13275 PF00521 DNA gyrase/topoisomerase IV, subunit A AVS42_RS13285 PF00986 DNA gyrase B subunit, carboxyl terminus AVS42_RS13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS13285 PF00204 DNA gyrase B AVS42_RS13285 PF01751 Toprim domain AVS42_RS13290 PF00085 Thioredoxin AVS42_RS13295 PF07498 Rho termination factor, N-terminal domain AVS42_RS13295 PF07497 Rho termination factor, RNA-binding domain AVS42_RS13295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS42_RS13305 PF08335 GlnD PII-uridylyltransferase AVS42_RS13305 PF03710 Glutamate-ammonia ligase adenylyltransferase AVS42_RS13310 PF02677 Epoxyqueuosine reductase QueH AVS42_RS13315 PF03313 Serine dehydratase alpha chain AVS42_RS13315 PF03315 Serine dehydratase beta chain AVS42_RS13320 PF02690 Na+/Pi-cotransporter AVS42_RS13325 PF01738 Dienelactone hydrolase family AVS42_RS13335 PF00476 DNA polymerase family A AVS42_RS13335 PF01612 3'-5' exonuclease AVS42_RS13335 PF01367 5'-3' exonuclease, C-terminal SAM fold AVS42_RS13335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVS42_RS13340 PF03641 Possible lysine decarboxylase AVS42_RS13355 PF00679 Elongation factor G C-terminus AVS42_RS13355 PF00009 Elongation factor Tu GTP binding domain AVS42_RS13355 PF03144 Elongation factor Tu domain 2 AVS42_RS13360 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVS42_RS13360 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVS42_RS13365 PF02033 Ribosome-binding factor A AVS42_RS13370 PF11987 Translation-initiation factor 2 AVS42_RS13370 PF00009 Elongation factor Tu GTP binding domain AVS42_RS13370 PF04760 Translation initiation factor IF-2, N-terminal region AVS42_RS13370 PF08364 Bacterial translation initiation factor IF-2 associated region AVS42_RS13375 PF13184 NusA-like KH domain AVS42_RS13375 PF08529 NusA N-terminal domain AVS42_RS13380 PF17384 RimP C-terminal SH3 domain AVS42_RS13380 PF02576 RimP N-terminal domain AVS42_RS13385 PF01479 S4 domain AVS42_RS13385 PF00849 RNA pseudouridylate synthase AVS42_RS13390 PF04079 Segregation and condensation complex subunit ScpB AVS42_RS13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS13400 PF03466 LysR substrate binding domain AVS42_RS13405 PF00881 Nitroreductase family AVS42_RS13410 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVS42_RS13410 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS42_RS13430 PF02798 Glutathione S-transferase, N-terminal domain AVS42_RS13430 PF14497 Glutathione S-transferase, C-terminal domain AVS42_RS13435 PF02401 LytB protein AVS42_RS13440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVS42_RS13445 PF04002 RadC-like JAB domain AVS42_RS13450 PF04199 Putative cyclase AVS42_RS13455 PF03301 Tryptophan 2,3-dioxygenase AVS42_RS13460 PF01197 Ribosomal protein L31 AVS42_RS13470 PF01554 MatE AVS42_RS13485 PF18073 Rubredoxin metal binding domain AVS42_RS13490 PF12034 Domain of unknown function (DUF3520) AVS42_RS13490 PF12450 von Willebrand factor AVS42_RS13490 PF00092 von Willebrand factor type A domain AVS42_RS13495 PF04542 Sigma-70 region 2 AVS42_RS13495 PF04545 Sigma-70, region 4 AVS42_RS13515 PF00842 Alanine racemase, C-terminal domain AVS42_RS13515 PF01168 Alanine racemase, N-terminal domain AVS42_RS13530 PF01593 Flavin containing amine oxidoreductase AVS42_RS13530 PF01593 Flavin containing amine oxidoreductase AVS42_RS13535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVS42_RS13545 PF01061 ABC-2 type transporter AVS42_RS13550 PF00005 ABC transporter AVS42_RS13570 PF02424 ApbE family AVS42_RS13575 PF00258 Flavodoxin AVS42_RS13575 PF00175 Oxidoreductase NAD-binding domain AVS42_RS13575 PF00667 FAD binding domain AVS42_RS13585 PF07969 Amidohydrolase family AVS42_RS13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS13590 PF03466 LysR substrate binding domain AVS42_RS13600 PF09370 Phosphoenolpyruvate hydrolase-like AVS42_RS13615 PF03212 Pertactin AVS42_RS13615 PF03797 Autotransporter beta-domain AVS42_RS13620 PF03212 Pertactin AVS42_RS13620 PF03797 Autotransporter beta-domain AVS42_RS13635 PF00004 ATPase family associated with various cellular activities (AAA) AVS42_RS13635 PF07724 AAA domain (Cdc48 subfamily) AVS42_RS13635 PF17871 AAA lid domain AVS42_RS13635 PF02861 Clp amino terminal domain, pathogenicity island component AVS42_RS13635 PF10431 C-terminal, D2-small domain, of ClpB protein AVS42_RS13640 PF00027 Cyclic nucleotide-binding domain AVS42_RS13640 PF13545 Crp-like helix-turn-helix domain AVS42_RS13655 PF00293 NUDIX domain AVS42_RS13660 PF12843 Putative quorum-sensing-regulated virulence factor AVS42_RS13670 PF12680 SnoaL-like domain AVS42_RS13670 PF04542 Sigma-70 region 2 AVS42_RS13670 PF08281 Sigma-70, region 4 AVS42_RS13675 PF02627 Carboxymuconolactone decarboxylase family AVS42_RS13705 PF00155 Aminotransferase class I and II AVS42_RS13710 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS13715 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS13725 PF00005 ABC transporter AVS42_RS13750 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS42_RS13775 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS13780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS42_RS13780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS42_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS13785 PF03466 LysR substrate binding domain AVS42_RS13795 PF17676 LD-carboxypeptidase C-terminal domain AVS42_RS13795 PF02016 LD-carboxypeptidase N-terminal domain AVS42_RS13810 PF07690 Major Facilitator Superfamily AVS42_RS13820 PF03466 LysR substrate binding domain AVS42_RS13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS13825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVS42_RS13825 PF13378 Enolase C-terminal domain-like AVS42_RS13830 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS13850 PF02567 Phenazine biosynthesis-like protein AVS42_RS13860 PF03239 Iron permease FTR1 family AVS42_RS13870 PF10634 Fe2+ transport protein AVS42_RS13875 PF05233 PHB accumulation regulatory domain AVS42_RS13875 PF07879 PHB/PHA accumulation regulator DNA-binding domain AVS42_RS13880 PF00106 short chain dehydrogenase AVS42_RS13885 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AVS42_RS13890 PF02578 Multi-copper polyphenol oxidoreductase laccase AVS42_RS13895 PF00849 RNA pseudouridylate synthase AVS42_RS13895 PF01479 S4 domain AVS42_RS13900 PF13525 Outer membrane lipoprotein AVS42_RS13905 PF13307 Helicase C-terminal domain AVS42_RS13905 PF04851 Type III restriction enzyme, res subunit AVS42_RS13910 PF16921 Tex protein YqgF-like domain AVS42_RS13910 PF17674 HHH domain AVS42_RS13910 PF09371 Tex-like protein N-terminal domain AVS42_RS13910 PF00575 S1 RNA binding domain AVS42_RS13915 PF00579 tRNA synthetases class I (W and Y) AVS42_RS13940 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS13950 PF03466 LysR substrate binding domain AVS42_RS13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS13960 PF03969 AFG1-like ATPase AVS42_RS13965 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS13965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS42_RS13970 PF02817 e3 binding domain AVS42_RS13970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS42_RS13970 PF00364 Biotin-requiring enzyme AVS42_RS13975 PF00676 Dehydrogenase E1 component AVS42_RS13975 PF02779 Transketolase, pyrimidine binding domain AVS42_RS13975 PF16078 2-oxoglutarate dehydrogenase N-terminus AVS42_RS13975 PF16870 2-oxoglutarate dehydrogenase C-terminal AVS42_RS13985 PF01037 Lrp/AsnC ligand binding domain AVS42_RS13990 PF00456 Transketolase, thiamine diphosphate binding domain AVS42_RS13990 PF17831 Pyruvate dehydrogenase E1 component middle domain AVS42_RS13995 PF00390 Malic enzyme, N-terminal domain AVS42_RS13995 PF01515 Phosphate acetyl/butaryl transferase AVS42_RS13995 PF03949 Malic enzyme, NAD binding domain AVS42_RS14000 PF16970 Type-1 fimbrial protein, A AVS42_RS14010 PF03449 Transcription elongation factor, N-terminal AVS42_RS14010 PF01272 Transcription elongation factor, GreA/GreB, C-term AVS42_RS14015 PF02811 PHP domain AVS42_RS14025 PF03772 Competence protein AVS42_RS14025 PF13567 Domain of unknown function (DUF4131) AVS42_RS14025 PF00753 Metallo-beta-lactamase superfamily AVS42_RS14055 PF01026 TatD related DNase AVS42_RS14060 PF00005 ABC transporter AVS42_RS14065 PF12704 MacB-like periplasmic core domain AVS42_RS14065 PF02687 FtsX-like permease family AVS42_RS14075 PF02272 DHHA1 domain AVS42_RS14075 PF17768 RecJ OB domain AVS42_RS14075 PF01368 DHH family AVS42_RS14085 PF00106 short chain dehydrogenase AVS42_RS14090 PF01336 OB-fold nucleic acid binding domain AVS42_RS14090 PF00152 tRNA synthetases class II (D, K and N) AVS42_RS14100 PF00440 Bacterial regulatory proteins, tetR family AVS42_RS14100 PF17932 Tetracyclin repressor-like, C-terminal domain AVS42_RS14105 PF00501 AMP-binding enzyme AVS42_RS14110 PF00005 ABC transporter AVS42_RS14120 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS14120 PF11862 Domain of unknown function (DUF3382) AVS42_RS14130 PF00005 ABC transporter AVS42_RS14130 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS14140 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS14140 PF07689 KaiB domain AVS42_RS14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS14145 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS14145 PF00072 Response regulator receiver domain AVS42_RS14150 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVS42_RS14160 PF03631 Virulence factor BrkB AVS42_RS14175 PF01207 Dihydrouridine synthase (Dus) AVS42_RS14180 PF01636 Phosphotransferase enzyme family AVS42_RS14205 PF01985 CRS1 / YhbY (CRM) domain AVS42_RS14210 PF01728 FtsJ-like methyltransferase AVS42_RS14215 PF17862 AAA+ lid domain AVS42_RS14215 PF01434 Peptidase family M41 AVS42_RS14215 PF06480 FtsH Extracellular AVS42_RS14215 PF00004 ATPase family associated with various cellular activities (AAA) AVS42_RS14220 PF00809 Pterin binding enzyme AVS42_RS14225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS42_RS14225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS42_RS14225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS42_RS14225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS42_RS14235 PF02541 Ppx/GppA phosphatase family AVS42_RS14240 PF02503 Polyphosphate kinase middle domain AVS42_RS14240 PF13090 Polyphosphate kinase C-terminal domain 2 AVS42_RS14240 PF17941 Polyphosphate kinase C-terminal domain 1 AVS42_RS14240 PF13089 Polyphosphate kinase N-terminal domain AVS42_RS14245 PF12849 PBP superfamily domain AVS42_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS14255 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS14260 PF00005 ABC transporter AVS42_RS14275 PF01337 Barstar (barnase inhibitor) AVS42_RS14285 PF03949 Malic enzyme, NAD binding domain AVS42_RS14285 PF01515 Phosphate acetyl/butaryl transferase AVS42_RS14285 PF00390 Malic enzyme, N-terminal domain AVS42_RS14295 PF00155 Aminotransferase class I and II AVS42_RS14300 PF01464 Transglycosylase SLT domain AVS42_RS14300 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AVS42_RS14305 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVS42_RS14330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS42_RS14330 PF14824 Sirohaem biosynthesis protein central AVS42_RS14330 PF10414 Sirohaem synthase dimerisation region AVS42_RS14335 PF03797 Autotransporter beta-domain AVS42_RS14335 PF03212 Pertactin AVS42_RS14350 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AVS42_RS14355 PF02547 Queuosine biosynthesis protein AVS42_RS14360 PF01702 Queuine tRNA-ribosyltransferase AVS42_RS14365 PF02699 Preprotein translocase subunit AVS42_RS14370 PF07549 SecD/SecF GG Motif AVS42_RS14370 PF13721 SecD export protein N-terminal TM region AVS42_RS14370 PF02355 Protein export membrane protein AVS42_RS14375 PF07549 SecD/SecF GG Motif AVS42_RS14375 PF02355 Protein export membrane protein AVS42_RS14390 PF01938 TRAM domain AVS42_RS14390 PF04055 Radical SAM superfamily AVS42_RS14390 PF00919 Uncharacterized protein family UPF0004 AVS42_RS14395 PF02562 PhoH-like protein AVS42_RS14400 PF02130 Uncharacterized protein family UPF0054 AVS42_RS14405 PF03471 Transporter associated domain AVS42_RS14405 PF00571 CBS domain AVS42_RS14410 PF00795 Carbon-nitrogen hydrolase AVS42_RS14415 PF00248 Aldo/keto reductase family AVS42_RS14440 PF04344 Chemotaxis phosphatase, CheZ AVS42_RS14445 PF00072 Response regulator receiver domain AVS42_RS14450 PF01339 CheB methylesterase AVS42_RS14450 PF00072 Response regulator receiver domain AVS42_RS14460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS42_RS14460 PF02203 Tar ligand binding domain homologue AVS42_RS14460 PF00672 HAMP domain AVS42_RS14465 PF01584 CheW-like domain AVS42_RS14470 PF01627 Hpt domain AVS42_RS14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS14470 PF02895 Signal transducing histidine kinase, homodimeric domain AVS42_RS14470 PF01584 CheW-like domain AVS42_RS14470 PF09078 CheY binding AVS42_RS14475 PF00072 Response regulator receiver domain AVS42_RS14480 PF00691 OmpA family AVS42_RS14480 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVS42_RS14485 PF01618 MotA/TolQ/ExbB proton channel family AVS42_RS14490 PF05280 Flagellar transcriptional activator (FlhC) AVS42_RS14495 PF05247 Flagellar transcriptional activator (FlhD) AVS42_RS14500 PF04545 Sigma-70, region 4 AVS42_RS14500 PF04539 Sigma-70 region 3 AVS42_RS14500 PF04542 Sigma-70 region 2 AVS42_RS14510 PF01176 Translation initiation factor 1A / IF-1 AVS42_RS14520 PF08525 Opacity-associated protein A N-terminal motif AVS42_RS14520 PF01551 Peptidase family M23 AVS42_RS14520 PF01476 LysM domain AVS42_RS14530 PF00994 Probable molybdopterin binding domain AVS42_RS14540 PF03591 AzlC protein AVS42_RS14550 PF00226 DnaJ domain AVS42_RS14550 PF01556 DnaJ C terminal domain AVS42_RS14575 PF14834 Glutathione S-transferase, C-terminal domain AVS42_RS14575 PF02798 Glutathione S-transferase, N-terminal domain AVS42_RS14580 PF11339 Protein of unknown function (DUF3141) AVS42_RS14585 PF01515 Phosphate acetyl/butaryl transferase AVS42_RS14590 PF00871 Acetokinase family AVS42_RS14600 PF00162 Phosphoglycerate kinase AVS42_RS14605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVS42_RS14605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVS42_RS14610 PF02779 Transketolase, pyrimidine binding domain AVS42_RS14610 PF02780 Transketolase, C-terminal domain AVS42_RS14610 PF00456 Transketolase, thiamine diphosphate binding domain AVS42_RS14615 PF04452 RNA methyltransferase AVS42_RS14625 PF00700 Bacterial flagellin C-terminal helical region AVS42_RS14625 PF00669 Bacterial flagellin N-terminal helical region AVS42_RS14630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS42_RS14630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS14635 PF02817 e3 binding domain AVS42_RS14635 PF00364 Biotin-requiring enzyme AVS42_RS14635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS42_RS14640 PF17831 Pyruvate dehydrogenase E1 component middle domain AVS42_RS14640 PF00456 Transketolase, thiamine diphosphate binding domain AVS42_RS14645 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS14645 PF00989 PAS fold AVS42_RS14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS14650 PF00072 Response regulator receiver domain AVS42_RS14650 PF00196 Bacterial regulatory proteins, luxR family AVS42_RS14655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVS42_RS14655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVS42_RS14660 PF01432 Peptidase family M3 AVS42_RS14665 PF02630 SCO1/SenC AVS42_RS14675 PF02321 Outer membrane efflux protein AVS42_RS14680 PF00873 AcrB/AcrD/AcrF family AVS42_RS14685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS42_RS14685 PF00529 HlyD membrane-fusion protein of T1SS AVS42_RS14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS14690 PF03466 LysR substrate binding domain AVS42_RS14695 PF00849 RNA pseudouridylate synthase AVS42_RS14695 PF01479 S4 domain AVS42_RS14700 PF04345 Chorismate lyase AVS42_RS14705 PF07690 Major Facilitator Superfamily AVS42_RS14715 PF00248 Aldo/keto reductase family AVS42_RS14725 PF00293 NUDIX domain AVS42_RS14730 PF01245 Ribosomal protein L19 AVS42_RS14745 PF04055 Radical SAM superfamily AVS42_RS14755 PF01507 Phosphoadenosine phosphosulfate reductase family AVS42_RS14760 PF12857 TOBE-like domain AVS42_RS14760 PF17850 CysA C-terminal regulatory domain AVS42_RS14760 PF00005 ABC transporter AVS42_RS14765 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS14770 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS14785 PF00578 AhpC/TSA family AVS42_RS14785 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVS42_RS14790 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS14790 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVS42_RS14790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS14790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS14795 PF01012 Electron transfer flavoprotein domain AVS42_RS14795 PF00766 Electron transfer flavoprotein FAD-binding domain AVS42_RS14800 PF01012 Electron transfer flavoprotein domain AVS42_RS14805 PF00850 Histone deacetylase domain AVS42_RS14810 PF13406 Transglycosylase SLT domain AVS42_RS14815 PF00291 Pyridoxal-phosphate dependent enzyme AVS42_RS14825 PF10531 SLBB domain AVS42_RS14830 PF01370 NAD dependent epimerase/dehydratase family AVS42_RS14835 PF00294 pfkB family carbohydrate kinase AVS42_RS14840 PF18073 Rubredoxin metal binding domain AVS42_RS14850 PF00216 Bacterial DNA-binding protein AVS42_RS14855 PF00575 S1 RNA binding domain AVS42_RS14860 PF02224 Cytidylate kinase AVS42_RS14865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVS42_RS14870 PF02153 Prephenate dehydrogenase AVS42_RS14875 PF01842 ACT domain AVS42_RS14875 PF00800 Prephenate dehydratase AVS42_RS14875 PF01817 Chorismate mutase type II AVS42_RS14880 PF00266 Aminotransferase class-V AVS42_RS14885 PF00521 DNA gyrase/topoisomerase IV, subunit A AVS42_RS14885 PF03989 DNA gyrase C-terminal domain, beta-propeller AVS42_RS14890 PF00691 OmpA family AVS42_RS14900 PF13419 Haloacid dehalogenase-like hydrolase AVS42_RS14905 PF07690 Major Facilitator Superfamily AVS42_RS14930 PF03466 LysR substrate binding domain AVS42_RS14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS14935 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS14945 PF00817 impB/mucB/samB family AVS42_RS14945 PF11799 impB/mucB/samB family C-terminal domain AVS42_RS14945 PF11798 IMS family HHH motif AVS42_RS14960 PF00326 Prolyl oligopeptidase family AVS42_RS14965 PF00905 Penicillin binding protein transpeptidase domain AVS42_RS14965 PF00912 Transglycosylase AVS42_RS14965 PF17092 Penicillin-binding protein OB-like domain AVS42_RS14970 PF00149 Calcineurin-like phosphoesterase AVS42_RS14985 PF00248 Aldo/keto reductase family AVS42_RS14990 PF00248 Aldo/keto reductase family AVS42_RS14995 PF00664 ABC transporter transmembrane region AVS42_RS14995 PF00005 ABC transporter AVS42_RS15040 PF01039 Carboxyl transferase domain AVS42_RS15045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS42_RS15045 PF02785 Biotin carboxylase C-terminal domain AVS42_RS15045 PF00289 Biotin carboxylase, N-terminal domain AVS42_RS15050 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS15050 PF07702 UTRA domain AVS42_RS15070 PF02436 Conserved carboxylase domain AVS42_RS15070 PF00682 HMGL-like AVS42_RS15070 PF00364 Biotin-requiring enzyme AVS42_RS15075 PF00364 Biotin-requiring enzyme AVS42_RS15085 PF01966 HD domain AVS42_RS15105 PF07238 PilZ domain AVS42_RS15105 PF07317 Flagellar regulator YcgR AVS42_RS15125 PF05724 Thiopurine S-methyltransferase (TPMT) AVS42_RS15130 PF00664 ABC transporter transmembrane region AVS42_RS15130 PF00005 ABC transporter AVS42_RS15145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS15145 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS15145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS15150 PF10369 Small subunit of acetolactate synthase AVS42_RS15155 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVS42_RS15155 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVS42_RS15160 PF01066 CDP-alcohol phosphatidyltransferase AVS42_RS15175 PF00312 Ribosomal protein S15 AVS42_RS15180 PF03725 3' exoribonuclease family, domain 2 AVS42_RS15180 PF00575 S1 RNA binding domain AVS42_RS15180 PF01138 3' exoribonuclease family, domain 1 AVS42_RS15180 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVS42_RS15180 PF00013 KH domain AVS42_RS15195 PF13291 ACT domain AVS42_RS15195 PF00291 Pyridoxal-phosphate dependent enzyme AVS42_RS15210 PF08240 Alcohol dehydrogenase GroES-like domain AVS42_RS15210 PF00698 Acyl transferase domain AVS42_RS15210 PF08659 KR domain AVS42_RS15210 PF16197 Ketoacyl-synthetase C-terminal extension AVS42_RS15210 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS42_RS15210 PF14765 Polyketide synthase dehydratase AVS42_RS15210 PF00550 Phosphopantetheine attachment site AVS42_RS15210 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS42_RS15210 PF08990 Erythronolide synthase docking AVS42_RS15215 PF00121 Triosephosphate isomerase AVS42_RS15220 PF03840 Preprotein translocase SecG subunit AVS42_RS15230 PF02028 BCCT, betaine/carnitine/choline family transporter AVS42_RS15240 PF05034 Methylaspartate ammonia-lyase N-terminus AVS42_RS15240 PF07476 Methylaspartate ammonia-lyase C-terminus AVS42_RS15245 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS15260 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS15275 PF03466 LysR substrate binding domain AVS42_RS15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS15280 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS42_RS15285 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS42_RS15300 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS15305 PF01266 FAD dependent oxidoreductase AVS42_RS15315 PF01968 Hydantoinase/oxoprolinase AVS42_RS15315 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS42_RS15325 PF00127 Copper binding proteins, plastocyanin/azurin family AVS42_RS15335 PF02321 Outer membrane efflux protein AVS42_RS15340 PF00873 AcrB/AcrD/AcrF family AVS42_RS15345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS42_RS15350 PF01638 HxlR-like helix-turn-helix AVS42_RS15360 PF02028 BCCT, betaine/carnitine/choline family transporter AVS42_RS15365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS15365 PF03466 LysR substrate binding domain AVS42_RS15370 PF00781 Diacylglycerol kinase catalytic domain AVS42_RS15380 PF01569 PAP2 superfamily AVS42_RS15410 PF13609 Gram-negative porin AVS42_RS15415 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVS42_RS15420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVS42_RS15425 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVS42_RS15430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVS42_RS15440 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVS42_RS15440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVS42_RS15440 PF10531 SLBB domain AVS42_RS15445 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVS42_RS15445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVS42_RS15445 PF00384 Molybdopterin oxidoreductase AVS42_RS15450 PF00146 NADH dehydrogenase AVS42_RS15455 PF12838 4Fe-4S dicluster domain AVS42_RS15460 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVS42_RS15465 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVS42_RS15470 PF00361 Proton-conducting membrane transporter AVS42_RS15470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVS42_RS15475 PF00361 Proton-conducting membrane transporter AVS42_RS15475 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVS42_RS15480 PF00361 Proton-conducting membrane transporter AVS42_RS15490 PF00593 TonB dependent receptor AVS42_RS15490 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS15495 PF00593 TonB dependent receptor AVS42_RS15495 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS15510 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS15510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS15510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS15515 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS15520 PF03466 LysR substrate binding domain AVS42_RS15530 PF00270 DEAD/DEAH box helicase AVS42_RS15530 PF00271 Helicase conserved C-terminal domain AVS42_RS15530 PF03461 TRCF domain AVS42_RS15530 PF17757 UvrB interaction domain AVS42_RS15530 PF02559 CarD-like/TRCF domain AVS42_RS15535 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVS42_RS15540 PF02542 YgbB family AVS42_RS15550 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AVS42_RS15555 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVS42_RS15555 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVS42_RS15555 PF01433 Peptidase family M1 domain AVS42_RS15575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS15575 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS15575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS15585 PF09084 NMT1/THI5 like AVS42_RS15590 PF00005 ABC transporter AVS42_RS15595 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS15605 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS15605 PF00501 AMP-binding enzyme AVS42_RS15610 PF00107 Zinc-binding dehydrogenase AVS42_RS15610 PF08240 Alcohol dehydrogenase GroES-like domain AVS42_RS15615 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS15615 PF07729 FCD domain AVS42_RS15625 PF07729 FCD domain AVS42_RS15625 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS15630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS15630 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS15630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS15650 PF01063 Amino-transferase class IV AVS42_RS15655 PF00005 ABC transporter AVS42_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS15670 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS15675 PF03466 LysR substrate binding domain AVS42_RS15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS15680 PF02321 Outer membrane efflux protein AVS42_RS15685 PF13533 Biotin-lipoyl like AVS42_RS15690 PF03412 Peptidase C39 family AVS42_RS15690 PF00005 ABC transporter AVS42_RS15690 PF00664 ABC transporter transmembrane region AVS42_RS15695 PF03497 Anthrax toxin LF subunit AVS42_RS15695 PF02382 N-terminal domain in RTX protein AVS42_RS15695 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AVS42_RS15705 PF02794 RTX toxin acyltransferase family AVS42_RS15710 PF00171 Aldehyde dehydrogenase family AVS42_RS15715 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS15720 PF01266 FAD dependent oxidoreductase AVS42_RS15725 PF02538 Hydantoinase B/oxoprolinase AVS42_RS15730 PF01968 Hydantoinase/oxoprolinase AVS42_RS15730 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS42_RS15735 PF03466 LysR substrate binding domain AVS42_RS15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS15745 PF00348 Polyprenyl synthetase AVS42_RS15755 PF00829 Ribosomal prokaryotic L21 protein AVS42_RS15760 PF01016 Ribosomal L27 protein AVS42_RS15765 PF01018 GTP1/OBG AVS42_RS15765 PF01926 50S ribosome-binding GTPase AVS42_RS15770 PF00696 Amino acid kinase family AVS42_RS15770 PF01472 PUA domain AVS42_RS15815 PF16220 Domain of unknown function (DUF4880) AVS42_RS15815 PF04773 FecR protein AVS42_RS15820 PF00593 TonB dependent receptor AVS42_RS15820 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS15825 PF04264 YceI-like domain AVS42_RS15835 PF03435 Saccharopine dehydrogenase NADP binding domain AVS42_RS15835 PF16653 Saccharopine dehydrogenase C-terminal domain AVS42_RS15840 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVS42_RS15860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS15865 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS15875 PF00005 ABC transporter AVS42_RS15875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS15880 PF01425 Amidase AVS42_RS15885 PF00202 Aminotransferase class-III AVS42_RS15905 PF04972 BON domain AVS42_RS15905 PF00691 OmpA family AVS42_RS15910 PF01329 Pterin 4 alpha carbinolamine dehydratase AVS42_RS15920 PF00483 Nucleotidyl transferase AVS42_RS15925 PF01636 Phosphotransferase enzyme family AVS42_RS15930 PF04453 LPS transport system D AVS42_RS15935 PF00639 PPIC-type PPIASE domain AVS42_RS15935 PF09312 SurA N-terminal domain AVS42_RS15940 PF00398 Ribosomal RNA adenine dimethylase AVS42_RS15945 PF02595 Glycerate kinase family AVS42_RS15950 PF00224 Pyruvate kinase, barrel domain AVS42_RS15950 PF02887 Pyruvate kinase, alpha/beta domain AVS42_RS15955 PF07670 Nucleoside recognition AVS42_RS15960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS15960 PF09317 Domain of unknown function (DUF1974) AVS42_RS15960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS15960 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS15980 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS15985 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS15990 PF00005 ABC transporter AVS42_RS15995 PF01032 FecCD transport family AVS42_RS16005 PF00691 OmpA family AVS42_RS16010 PF04052 TolB amino-terminal domain AVS42_RS16010 PF07676 WD40-like Beta Propeller Repeat AVS42_RS16020 PF02472 Biopolymer transport protein ExbD/TolR AVS42_RS16025 PF01618 MotA/TolQ/ExbB proton channel family AVS42_RS16030 PF03061 Thioesterase superfamily AVS42_RS16035 PF04073 Aminoacyl-tRNA editing domain AVS42_RS16035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS42_RS16035 PF03129 Anticodon binding domain AVS42_RS16040 PF00293 NUDIX domain AVS42_RS16045 PF00072 Response regulator receiver domain AVS42_RS16045 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS16055 PF02586 SOS response associated peptidase (SRAP) AVS42_RS16125 PF06791 Prophage tail length tape measure protein AVS42_RS16270 PF03180 NLPA lipoprotein AVS42_RS16280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVS42_RS16280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVS42_RS16285 PF00005 ABC transporter AVS42_RS16290 PF00005 ABC transporter AVS42_RS16290 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS16295 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS16300 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS16305 PF13458 Periplasmic binding protein AVS42_RS16310 PF01425 Amidase AVS42_RS16315 PF00484 Carbonic anhydrase AVS42_RS16330 PF09382 RQC domain AVS42_RS16330 PF00270 DEAD/DEAH box helicase AVS42_RS16330 PF00271 Helicase conserved C-terminal domain AVS42_RS16330 PF16124 RecQ zinc-binding AVS42_RS16330 PF00570 HRDC domain AVS42_RS16335 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVS42_RS16335 PF17864 RuvB AAA lid domain AVS42_RS16335 PF05491 RuvB C-terminal winged helix domain AVS42_RS16340 PF00291 Pyridoxal-phosphate dependent enzyme AVS42_RS16345 PF01370 NAD dependent epimerase/dehydratase family AVS42_RS16350 PF01330 RuvA N terminal domain AVS42_RS16350 PF07499 RuvA, C-terminal domain AVS42_RS16355 PF02075 Crossover junction endodeoxyribonuclease RuvC AVS42_RS16360 PF02142 MGS-like domain AVS42_RS16360 PF01808 AICARFT/IMPCHase bienzyme AVS42_RS16365 PF02954 Bacterial regulatory protein, Fis family AVS42_RS16370 PF01207 Dihydrouridine synthase (Dus) AVS42_RS16375 PF01494 FAD binding domain AVS42_RS16385 PF05195 Aminopeptidase P, N-terminal domain AVS42_RS16385 PF00557 Metallopeptidase family M24 AVS42_RS16410 PF13609 Gram-negative porin AVS42_RS16420 PF00483 Nucleotidyl transferase AVS42_RS16425 PF01435 Peptidase family M48 AVS42_RS16425 PF13181 Tetratricopeptide repeat AVS42_RS16430 PF00561 alpha/beta hydrolase fold AVS42_RS16445 PF01063 Amino-transferase class IV AVS42_RS16460 PF00270 DEAD/DEAH box helicase AVS42_RS16460 PF00271 Helicase conserved C-terminal domain AVS42_RS16480 PF02464 Competence-damaged protein AVS42_RS16480 PF18146 Damage-inducible protein CinA KH domain AVS42_RS16480 PF00994 Probable molybdopterin binding domain AVS42_RS16485 PF01614 Bacterial transcriptional regulator AVS42_RS16485 PF09339 IclR helix-turn-helix domain AVS42_RS16490 PF05785 Rho-activating domain of cytotoxic necrotizing factor AVS42_RS16490 PF18807 Tripartite Tc toxins repeat AVS42_RS16495 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS16505 PF01180 Dihydroorotate dehydrogenase AVS42_RS16510 PF04376 Arginine-tRNA-protein transferase, N terminus AVS42_RS16510 PF04377 Arginine-tRNA-protein transferase, C terminus AVS42_RS16515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVS42_RS16525 PF03466 LysR substrate binding domain AVS42_RS16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS16565 PF07729 FCD domain AVS42_RS16565 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS16570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS16570 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS16570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS16575 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS16580 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS42_RS16585 PF00390 Malic enzyme, N-terminal domain AVS42_RS16585 PF03949 Malic enzyme, NAD binding domain AVS42_RS16585 PF01515 Phosphate acetyl/butaryl transferase AVS42_RS16595 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS16600 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS16605 PF00005 ABC transporter AVS42_RS16605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS16620 PF03466 LysR substrate binding domain AVS42_RS16635 PF01022 Bacterial regulatory protein, arsR family AVS42_RS16650 PF03594 Benzoate membrane transport protein AVS42_RS16655 PF00037 4Fe-4S binding domain AVS42_RS16660 PF01467 Cytidylyltransferase-like AVS42_RS16670 PF02881 SRP54-type protein, helical bundle domain AVS42_RS16670 PF00448 SRP54-type protein, GTPase domain AVS42_RS16680 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS16685 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS16690 PF00005 ABC transporter AVS42_RS16700 PF00005 ABC transporter AVS42_RS16720 PF00925 GTP cyclohydrolase II AVS42_RS16720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVS42_RS16725 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVS42_RS16730 PF01029 NusB family AVS42_RS16735 PF00586 AIR synthase related protein, N-terminal domain AVS42_RS16735 PF02769 AIR synthase related protein, C-terminal domain AVS42_RS16740 PF04608 Phosphatidylglycerophosphatase A AVS42_RS16745 PF18146 Damage-inducible protein CinA KH domain AVS42_RS16745 PF02464 Competence-damaged protein AVS42_RS16745 PF00994 Probable molybdopterin binding domain AVS42_RS16750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVS42_RS16755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS16760 PF01219 Prokaryotic diacylglycerol kinase AVS42_RS16765 PF03631 Virulence factor BrkB AVS42_RS16770 PF03797 Autotransporter beta-domain AVS42_RS16770 PF03212 Pertactin AVS42_RS16775 PF00118 TCP-1/cpn60 chaperonin family AVS42_RS16780 PF00166 Chaperonin 10 Kd subunit AVS42_RS16800 PF00890 FAD binding domain AVS42_RS16810 PF03466 LysR substrate binding domain AVS42_RS16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS16815 PF00890 FAD binding domain AVS42_RS16835 PF00990 Diguanylate cyclase, GGDEF domain AVS42_RS16840 PF00072 Response regulator receiver domain AVS42_RS16870 PF03781 Sulfatase-modifying factor enzyme 1 AVS42_RS16870 PF12867 DinB superfamily AVS42_RS16875 PF10017 Histidine-specific methyltransferase, SAM-dependent AVS42_RS16885 PF13091 PLD-like domain AVS42_RS16885 PF13396 Phospholipase_D-nuclease N-terminal AVS42_RS16895 PF01645 Conserved region in glutamate synthase AVS42_RS16900 PF04143 Sulphur transport AVS42_RS16905 PF03547 Membrane transport protein AVS42_RS16910 PF13673 Acetyltransferase (GNAT) domain AVS42_RS16930 PF00575 S1 RNA binding domain AVS42_RS16930 PF17876 Cold shock domain AVS42_RS16930 PF00773 RNB domain AVS42_RS16930 PF08206 Ribonuclease B OB domain AVS42_RS16930 PF08461 Ribonuclease R winged-helix domain AVS42_RS16935 PF00588 SpoU rRNA Methylase family AVS42_RS16935 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVS42_RS16940 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS42_RS16945 PF18331 PKHD-type hydroxylase C-terminal domain AVS42_RS16945 PF13640 2OG-Fe(II) oxygenase superfamily AVS42_RS16950 PF00216 Bacterial DNA-binding protein AVS42_RS16965 PF01618 MotA/TolQ/ExbB proton channel family AVS42_RS16970 PF02472 Biopolymer transport protein ExbD/TolR AVS42_RS16975 PF00072 Response regulator receiver domain AVS42_RS16975 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS16980 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS16980 PF08521 Two-component sensor kinase N-terminal AVS42_RS16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS16985 PF02705 K+ potassium transporter AVS42_RS16990 PF00764 Arginosuccinate synthase AVS42_RS16995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS42_RS16995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS42_RS17000 PF00202 Aminotransferase class-III AVS42_RS17010 PF03466 LysR substrate binding domain AVS42_RS17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS17020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS42_RS17020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS42_RS17025 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17040 PF07729 FCD domain AVS42_RS17040 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS17050 PF07690 Major Facilitator Superfamily AVS42_RS17060 PF02627 Carboxymuconolactone decarboxylase family AVS42_RS17065 PF00578 AhpC/TSA family AVS42_RS17070 PF00672 HAMP domain AVS42_RS17070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS17070 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS17080 PF00072 Response regulator receiver domain AVS42_RS17080 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS17085 PF00814 Glycoprotease family AVS42_RS17090 PF03167 Uracil DNA glycosylase superfamily AVS42_RS17095 PF07690 Major Facilitator Superfamily AVS42_RS17100 PF06470 SMC proteins Flexible Hinge Domain AVS42_RS17100 PF02463 RecF/RecN/SMC N terminal domain AVS42_RS17110 PF01653 NAD-dependent DNA ligase adenylation domain AVS42_RS17110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVS42_RS17110 PF03120 NAD-dependent DNA ligase OB-fold domain AVS42_RS17110 PF00533 BRCA1 C Terminus (BRCT) domain AVS42_RS17110 PF12826 Helix-hairpin-helix motif AVS42_RS17125 PF04279 Intracellular septation protein A AVS42_RS17130 PF01641 SelR domain AVS42_RS17135 PF00005 ABC transporter AVS42_RS17140 PF02361 Cobalt transport protein AVS42_RS17145 PF02632 BioY family AVS42_RS17160 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS17160 PF00005 ABC transporter AVS42_RS17165 PF01063 Amino-transferase class IV AVS42_RS17180 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS17190 PF00005 ABC transporter AVS42_RS17195 PF00005 ABC transporter AVS42_RS17195 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS17200 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS42_RS17200 PF00633 Helix-hairpin-helix motif AVS42_RS17200 PF10576 Iron-sulfur binding domain of endonuclease III AVS42_RS17205 PF04060 Putative Fe-S cluster AVS42_RS17215 PF00970 Oxidoreductase FAD-binding domain AVS42_RS17215 PF00175 Oxidoreductase NAD-binding domain AVS42_RS17220 PF11953 Domain of unknown function (DUF3470) AVS42_RS17220 PF00037 4Fe-4S binding domain AVS42_RS17225 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVS42_RS17225 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AVS42_RS17230 PF01042 Endoribonuclease L-PSP AVS42_RS17240 PF06167 Glucose-regulated metallo-peptidase M90 AVS42_RS17245 PF13291 ACT domain AVS42_RS17245 PF04607 Region found in RelA / SpoT proteins AVS42_RS17245 PF02824 TGS domain AVS42_RS17250 PF01546 Peptidase family M20/M25/M40 AVS42_RS17250 PF07687 Peptidase dimerisation domain AVS42_RS17255 PF00291 Pyridoxal-phosphate dependent enzyme AVS42_RS17260 PF00290 Tryptophan synthase alpha chain AVS42_RS17265 PF01039 Carboxyl transferase domain AVS42_RS17265 PF17848 Acetyl-coA carboxylase zinc finger domain AVS42_RS17270 PF09411 Lipid A 3-O-deacylase (PagL) AVS42_RS17285 PF00575 S1 RNA binding domain AVS42_RS17285 PF10150 Ribonuclease E/G family AVS42_RS17285 PF12111 Polyribonucleotide phosphorylase C terminal AVS42_RS17290 PF00849 RNA pseudouridylate synthase AVS42_RS17290 PF01479 S4 domain AVS42_RS17295 PF13419 Haloacid dehalogenase-like hydrolase AVS42_RS17300 PF00174 Oxidoreductase molybdopterin binding domain AVS42_RS17305 PF01794 Ferric reductase like transmembrane component AVS42_RS17315 PF02515 CoA-transferase family III AVS42_RS17320 PF03466 LysR substrate binding domain AVS42_RS17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS17330 PF02515 CoA-transferase family III AVS42_RS17335 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17345 PF03466 LysR substrate binding domain AVS42_RS17345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS17350 PF01042 Endoribonuclease L-PSP AVS42_RS17355 PF00970 Oxidoreductase FAD-binding domain AVS42_RS17355 PF00042 Globin AVS42_RS17355 PF00175 Oxidoreductase NAD-binding domain AVS42_RS17360 PF02667 Short chain fatty acid transporter AVS42_RS17365 PF00171 Aldehyde dehydrogenase family AVS42_RS17370 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS17370 PF07729 FCD domain AVS42_RS17380 PF00313 'Cold-shock' DNA-binding domain AVS42_RS17385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS17385 PF03466 LysR substrate binding domain AVS42_RS17405 PF02803 Thiolase, C-terminal domain AVS42_RS17405 PF00108 Thiolase, N-terminal domain AVS42_RS17415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS17415 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS17415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS17420 PF03466 LysR substrate binding domain AVS42_RS17425 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17430 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS17435 PF02515 CoA-transferase family III AVS42_RS17440 PF03741 Integral membrane protein TerC family AVS42_RS17440 PF03471 Transporter associated domain AVS42_RS17445 PF02308 MgtC family AVS42_RS17450 PF14492 Elongation Factor G, domain II AVS42_RS17450 PF03764 Elongation factor G, domain IV AVS42_RS17450 PF00009 Elongation factor Tu GTP binding domain AVS42_RS17450 PF03144 Elongation factor Tu domain 2 AVS42_RS17450 PF00679 Elongation factor G C-terminus AVS42_RS17455 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS17455 PF00155 Aminotransferase class I and II AVS42_RS17465 PF00582 Universal stress protein family AVS42_RS17470 PF03144 Elongation factor Tu domain 2 AVS42_RS17470 PF00009 Elongation factor Tu GTP binding domain AVS42_RS17470 PF14492 Elongation Factor G, domain II AVS42_RS17470 PF00679 Elongation factor G C-terminus AVS42_RS17470 PF03764 Elongation factor G, domain IV AVS42_RS17480 PF00701 Dihydrodipicolinate synthetase family AVS42_RS17485 PF03466 LysR substrate binding domain AVS42_RS17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS17490 PF02515 CoA-transferase family III AVS42_RS17495 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS17500 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS17500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS17505 PF01575 MaoC like domain AVS42_RS17520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVS42_RS17520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVS42_RS17525 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS17530 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS17530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS17530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS17535 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17540 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS42_RS17540 PF13380 CoA binding domain AVS42_RS17550 PF00676 Dehydrogenase E1 component AVS42_RS17555 PF02779 Transketolase, pyrimidine binding domain AVS42_RS17555 PF02780 Transketolase, C-terminal domain AVS42_RS17560 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS17565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS42_RS17565 PF00364 Biotin-requiring enzyme AVS42_RS17565 PF02817 e3 binding domain AVS42_RS17570 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS17570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS17570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS17575 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS17575 PF00501 AMP-binding enzyme AVS42_RS17585 PF13458 Periplasmic binding protein AVS42_RS17590 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS17595 PF00005 ABC transporter AVS42_RS17595 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS42_RS17600 PF00005 ABC transporter AVS42_RS17605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS17605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS42_RS17620 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17635 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17645 PF00899 ThiF family AVS42_RS17650 PF03572 Peptidase family S41 AVS42_RS17650 PF13180 PDZ domain AVS42_RS17655 PF01551 Peptidase family M23 AVS42_RS17660 PF00300 Histidine phosphatase superfamily (branch 1) AVS42_RS17665 PF00581 Rhodanese-like domain AVS42_RS17665 PF17773 UPF0176 acylphosphatase like domain AVS42_RS17665 PF12368 Rhodanase C-terminal AVS42_RS17670 PF00462 Glutaredoxin AVS42_RS17675 PF02556 Preprotein translocase subunit SecB AVS42_RS17680 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVS42_RS17680 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVS42_RS17685 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17690 PF00588 SpoU rRNA Methylase family AVS42_RS17700 PF08241 Methyltransferase domain AVS42_RS17705 PF04107 Glutamate-cysteine ligase family 2(GCS2) AVS42_RS17710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS42_RS17720 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS17725 PF00005 ABC transporter AVS42_RS17735 PF01799 [2Fe-2S] binding domain AVS42_RS17735 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS17740 PF00941 FAD binding domain in molybdopterin dehydrogenase AVS42_RS17740 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVS42_RS17745 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS42_RS17745 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVS42_RS17750 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS42_RS17755 PF00355 Rieske [2Fe-2S] domain AVS42_RS17760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS17760 PF14759 Reductase C-terminal AVS42_RS17765 PF00355 Rieske [2Fe-2S] domain AVS42_RS17765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS42_RS17775 PF00857 Isochorismatase family AVS42_RS17785 PF00561 alpha/beta hydrolase fold AVS42_RS17790 PF17645 Arylmalonate decarboxylase AVS42_RS17800 PF12804 MobA-like NTP transferase domain AVS42_RS17810 PF01047 MarR family AVS42_RS17815 PF02386 Cation transport protein AVS42_RS17820 PF02254 TrkA-N domain AVS42_RS17820 PF02080 TrkA-C domain AVS42_RS17825 PF00072 Response regulator receiver domain AVS42_RS17825 PF02954 Bacterial regulatory protein, Fis family AVS42_RS17825 PF00158 Sigma-54 interaction domain AVS42_RS17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS17830 PF00989 PAS fold AVS42_RS17830 PF00672 HAMP domain AVS42_RS17830 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS17840 PF01029 NusB family AVS42_RS17840 PF01189 16S rRNA methyltransferase RsmB/F AVS42_RS17850 PF01958 Domain of unknown function DUF108 AVS42_RS17850 PF03447 Homoserine dehydrogenase, NAD binding domain AVS42_RS17875 PF01810 LysE type translocator AVS42_RS17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS17880 PF03466 LysR substrate binding domain AVS42_RS17890 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS17895 PF01168 Alanine racemase, N-terminal domain AVS42_RS17900 PF00155 Aminotransferase class I and II AVS42_RS17905 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS17915 PF00682 HMGL-like AVS42_RS17920 PF17782 DprA winged helix domain AVS42_RS17920 PF02481 DNA recombination-mediator protein A AVS42_RS17925 PF01037 Lrp/AsnC ligand binding domain AVS42_RS17930 PF00266 Aminotransferase class-V AVS42_RS17935 PF01327 Polypeptide deformylase AVS42_RS17950 PF02911 Formyl transferase, C-terminal domain AVS42_RS17950 PF00551 Formyl transferase AVS42_RS17960 PF13419 Haloacid dehalogenase-like hydrolase AVS42_RS17970 PF03641 Possible lysine decarboxylase AVS42_RS17980 PF04055 Radical SAM superfamily AVS42_RS17980 PF00919 Uncharacterized protein family UPF0004 AVS42_RS17980 PF18693 TRAM domain AVS42_RS17985 PF01361 Tautomerase enzyme AVS42_RS17990 PF01266 FAD dependent oxidoreductase AVS42_RS17995 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS18000 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS18000 PF07729 FCD domain AVS42_RS18010 PF00202 Aminotransferase class-III AVS42_RS18015 PF00491 Arginase family AVS42_RS18025 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS18030 PF02627 Carboxymuconolactone decarboxylase family AVS42_RS18035 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS18040 PF01614 Bacterial transcriptional regulator AVS42_RS18040 PF09339 IclR helix-turn-helix domain AVS42_RS18045 PF13193 AMP-binding enzyme C-terminal domain AVS42_RS18045 PF00501 AMP-binding enzyme AVS42_RS18050 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS18060 PF12951 Passenger-associated-transport-repeat AVS42_RS18060 PF12951 Passenger-associated-transport-repeat AVS42_RS18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS18080 PF03466 LysR substrate binding domain AVS42_RS18090 PF01168 Alanine racemase, N-terminal domain AVS42_RS18090 PF14031 Putative serine dehydratase domain AVS42_RS18095 PF07411 Domain of unknown function (DUF1508) AVS42_RS18100 PF01145 SPFH domain / Band 7 family AVS42_RS18110 PF01042 Endoribonuclease L-PSP AVS42_RS18155 PF03837 RecT family AVS42_RS18190 PF00589 Phage integrase family AVS42_RS18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS18195 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS18210 PF03466 LysR substrate binding domain AVS42_RS18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS18215 PF02525 Flavodoxin-like fold AVS42_RS18225 PF02096 60Kd inner membrane protein AVS42_RS18225 PF14849 YidC periplasmic domain AVS42_RS18230 PF01809 Putative membrane protein insertion efficiency factor AVS42_RS18235 PF00825 Ribonuclease P AVS42_RS18240 PF00468 Ribosomal protein L34 AVS42_RS18245 PF11638 DnaA N-terminal domain AVS42_RS18245 PF08299 Bacterial dnaA protein helix-turn-helix AVS42_RS18245 PF00308 Bacterial dnaA protein AVS42_RS18250 PF02767 DNA polymerase III beta subunit, central domain AVS42_RS18250 PF00712 DNA polymerase III beta subunit, N-terminal domain AVS42_RS18250 PF02768 DNA polymerase III beta subunit, C-terminal domain AVS42_RS18255 PF18053 DNA gyrase B subunit insert domain AVS42_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS18255 PF00204 DNA gyrase B AVS42_RS18255 PF00986 DNA gyrase B subunit, carboxyl terminus AVS42_RS18255 PF01751 Toprim domain AVS42_RS18260 PF01614 Bacterial transcriptional regulator AVS42_RS18260 PF09339 IclR helix-turn-helix domain AVS42_RS18265 PF01425 Amidase AVS42_RS18270 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS18275 PF00708 Acylphosphatase AVS42_RS18280 PF01070 FMN-dependent dehydrogenase AVS42_RS18300 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS18300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS18300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS18305 PF00376 MerR family regulatory protein AVS42_RS18305 PF09278 MerR, DNA binding AVS42_RS18320 PF02770 Acyl-CoA dehydrogenase, middle domain AVS42_RS18320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS42_RS18320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS42_RS18335 PF01039 Carboxyl transferase domain AVS42_RS18340 PF02785 Biotin carboxylase C-terminal domain AVS42_RS18340 PF00289 Biotin carboxylase, N-terminal domain AVS42_RS18340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS42_RS18340 PF00364 Biotin-requiring enzyme AVS42_RS18350 PF00202 Aminotransferase class-III AVS42_RS18355 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS18360 PF01168 Alanine racemase, N-terminal domain AVS42_RS18360 PF14031 Putative serine dehydratase domain AVS42_RS18365 PF16868 NMT1-like family AVS42_RS18375 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS18375 PF00593 TonB dependent receptor AVS42_RS18380 PF04361 Protein of unknown function (DUF494) AVS42_RS18395 PF01131 DNA topoisomerase AVS42_RS18395 PF01751 Toprim domain AVS42_RS18405 PF00005 ABC transporter AVS42_RS18410 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS18420 PF00171 Aldehyde dehydrogenase family AVS42_RS18430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS42_RS18430 PF00205 Thiamine pyrophosphate enzyme, central domain AVS42_RS18430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS42_RS18435 PF01037 Lrp/AsnC ligand binding domain AVS42_RS18440 PF01062 Bestrophin, RFP-TM, chloride channel AVS42_RS18450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVS42_RS18465 PF02574 Homocysteine S-methyltransferase AVS42_RS18465 PF00809 Pterin binding enzyme AVS42_RS18465 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVS42_RS18465 PF02607 B12 binding domain AVS42_RS18465 PF02310 B12 binding domain AVS42_RS18470 PF00593 TonB dependent receptor AVS42_RS18470 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS18475 PF01497 Periplasmic binding protein AVS42_RS18480 PF05690 Thiazole biosynthesis protein ThiG AVS42_RS18485 PF08543 Phosphomethylpyrimidine kinase AVS42_RS18500 PF02321 Outer membrane efflux protein AVS42_RS18505 PF01467 Cytidylyltransferase-like AVS42_RS18515 PF01594 AI-2E family transporter AVS42_RS18525 PF07885 Ion channel AVS42_RS18525 PF02254 TrkA-N domain AVS42_RS18535 PF00164 Ribosomal protein S12/S23 AVS42_RS18540 PF00177 Ribosomal protein S7p/S5e AVS42_RS18545 PF03144 Elongation factor Tu domain 2 AVS42_RS18545 PF00009 Elongation factor Tu GTP binding domain AVS42_RS18545 PF03764 Elongation factor G, domain IV AVS42_RS18545 PF14492 Elongation Factor G, domain II AVS42_RS18545 PF00679 Elongation factor G C-terminus AVS42_RS18550 PF03144 Elongation factor Tu domain 2 AVS42_RS18550 PF03143 Elongation factor Tu C-terminal domain AVS42_RS18550 PF00009 Elongation factor Tu GTP binding domain AVS42_RS18555 PF00338 Ribosomal protein S10p/S20e AVS42_RS18560 PF00297 Ribosomal protein L3 AVS42_RS18565 PF00573 Ribosomal protein L4/L1 family AVS42_RS18570 PF00276 Ribosomal protein L23 AVS42_RS18575 PF00181 Ribosomal Proteins L2, RNA binding domain AVS42_RS18575 PF03947 Ribosomal Proteins L2, C-terminal domain AVS42_RS18580 PF00203 Ribosomal protein S19 AVS42_RS18585 PF00237 Ribosomal protein L22p/L17e AVS42_RS18590 PF00189 Ribosomal protein S3, C-terminal domain AVS42_RS18590 PF07650 KH domain AVS42_RS18595 PF00252 Ribosomal protein L16p/L10e AVS42_RS18600 PF00831 Ribosomal L29 protein AVS42_RS18605 PF00366 Ribosomal protein S17 AVS42_RS18615 PF00171 Aldehyde dehydrogenase family AVS42_RS18625 PF00238 Ribosomal protein L14p/L23e AVS42_RS18630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVS42_RS18635 PF00673 ribosomal L5P family C-terminus AVS42_RS18635 PF00281 Ribosomal protein L5 AVS42_RS18640 PF00253 Ribosomal protein S14p/S29e AVS42_RS18645 PF00410 Ribosomal protein S8 AVS42_RS18650 PF00347 Ribosomal protein L6 AVS42_RS18655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVS42_RS18660 PF03719 Ribosomal protein S5, C-terminal domain AVS42_RS18660 PF00333 Ribosomal protein S5, N-terminal domain AVS42_RS18665 PF00327 Ribosomal protein L30p/L7e AVS42_RS18670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVS42_RS18675 PF00344 SecY translocase AVS42_RS18680 PF01176 Translation initiation factor 1A / IF-1 AVS42_RS18685 PF00444 Ribosomal protein L36 AVS42_RS18690 PF00416 Ribosomal protein S13/S18 AVS42_RS18695 PF00411 Ribosomal protein S11 AVS42_RS18700 PF00163 Ribosomal protein S4/S9 N-terminal domain AVS42_RS18700 PF01479 S4 domain AVS42_RS18705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVS42_RS18705 PF01000 RNA polymerase Rpb3/RpoA insert domain AVS42_RS18705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVS42_RS18710 PF01196 Ribosomal protein L17 AVS42_RS18715 PF01230 HIT domain AVS42_RS18720 PF03091 CutA1 divalent ion tolerance protein AVS42_RS18725 PF11412 Disulphide bond corrector protein DsbC AVS42_RS18725 PF02683 Cytochrome C biogenesis protein transmembrane region AVS42_RS18730 PF00892 EamA-like transporter family AVS42_RS18735 PF00490 Delta-aminolevulinic acid dehydratase AVS42_RS18740 PF01926 50S ribosome-binding GTPase AVS42_RS18745 PF00034 Cytochrome c AVS42_RS18750 PF05140 ResB-like family AVS42_RS18755 PF01578 Cytochrome C assembly protein AVS42_RS18760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVS42_RS18760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVS42_RS18765 PF13627 Prokaryotic lipoprotein-attachment site AVS42_RS18770 PF01491 Frataxin-like domain AVS42_RS18775 PF00912 Transglycosylase AVS42_RS18775 PF17092 Penicillin-binding protein OB-like domain AVS42_RS18775 PF00905 Penicillin binding protein transpeptidase domain AVS42_RS18780 PF01202 Shikimate kinase AVS42_RS18785 PF01761 3-dehydroquinate synthase AVS42_RS18790 PF01966 HD domain AVS42_RS18790 PF13286 Phosphohydrolase-associated domain AVS42_RS18795 PF13417 Glutathione S-transferase, N-terminal domain AVS42_RS18795 PF00043 Glutathione S-transferase, C-terminal domain AVS42_RS18800 PF17760 UvrA interaction domain AVS42_RS18800 PF17755 UvrA DNA-binding domain AVS42_RS18805 PF07690 Major Facilitator Superfamily AVS42_RS18810 PF00436 Single-strand binding protein family AVS42_RS18815 PF00593 TonB dependent receptor AVS42_RS18815 PF07715 TonB-dependent Receptor Plug Domain AVS42_RS18825 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS42_RS18835 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS18845 PF03466 LysR substrate binding domain AVS42_RS18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS18850 PF01979 Amidohydrolase family AVS42_RS18855 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS18860 PF00534 Glycosyl transferases group 1 AVS42_RS18860 PF13439 Glycosyltransferase Family 4 AVS42_RS18870 PF03466 LysR substrate binding domain AVS42_RS18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS18880 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS18885 PF00005 ABC transporter AVS42_RS18905 PF01274 Malate synthase AVS42_RS18910 PF07729 FCD domain AVS42_RS18910 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS18925 PF01040 UbiA prenyltransferase family AVS42_RS18930 PF00155 Aminotransferase class I and II AVS42_RS18935 PF13185 GAF domain AVS42_RS18940 PF00701 Dihydrodipicolinate synthetase family AVS42_RS18955 PF04972 BON domain AVS42_RS18955 PF01476 LysM domain AVS42_RS18960 PF02597 ThiS family AVS42_RS18960 PF05690 Thiazole biosynthesis protein ThiG AVS42_RS18965 PF00561 alpha/beta hydrolase fold AVS42_RS18970 PF02390 Putative methyltransferase AVS42_RS18985 PF00682 HMGL-like AVS42_RS18990 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS19010 PF07702 UTRA domain AVS42_RS19010 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS19015 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS19025 PF00392 Bacterial regulatory proteins, gntR family AVS42_RS19025 PF07702 UTRA domain AVS42_RS19030 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS19040 PF00005 ABC transporter AVS42_RS19045 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS19050 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS19055 PF08990 Erythronolide synthase docking AVS42_RS19055 PF08240 Alcohol dehydrogenase GroES-like domain AVS42_RS19055 PF14765 Polyketide synthase dehydratase AVS42_RS19055 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS42_RS19055 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS42_RS19055 PF08659 KR domain AVS42_RS19055 PF00550 Phosphopantetheine attachment site AVS42_RS19055 PF16197 Ketoacyl-synthetase C-terminal extension AVS42_RS19055 PF00698 Acyl transferase domain AVS42_RS19060 PF02515 CoA-transferase family III AVS42_RS19065 PF00440 Bacterial regulatory proteins, tetR family AVS42_RS19070 PF09297 NADH pyrophosphatase zinc ribbon domain AVS42_RS19070 PF00293 NUDIX domain AVS42_RS19075 PF00970 Oxidoreductase FAD-binding domain AVS42_RS19075 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS42_RS19075 PF00175 Oxidoreductase NAD-binding domain AVS42_RS19080 PF01425 Amidase AVS42_RS19090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS42_RS19090 PF03466 LysR substrate binding domain AVS42_RS19095 PF13458 Periplasmic binding protein AVS42_RS19105 PF00005 ABC transporter AVS42_RS19115 PF02653 Branched-chain amino acid transport system / permease component AVS42_RS19125 PF00355 Rieske [2Fe-2S] domain AVS42_RS19140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVS42_RS19140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVS42_RS19155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS42_RS19155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS42_RS19155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS42_RS19160 PF07690 Major Facilitator Superfamily AVS42_RS19165 PF12804 MobA-like NTP transferase domain AVS42_RS19165 PF14602 Hexapeptide repeat of succinyl-transferase AVS42_RS19165 PF00132 Bacterial transferase hexapeptide (six repeats) AVS42_RS19185 PF02630 SCO1/SenC AVS42_RS19190 PF01040 UbiA prenyltransferase family AVS42_RS19195 PF02628 Cytochrome oxidase assembly protein AVS42_RS19215 PF00510 Cytochrome c oxidase subunit III AVS42_RS19230 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS42_RS19235 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVS42_RS19235 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVS42_RS19245 PF00999 Sodium/hydrogen exchanger family AVS42_RS19250 PF00149 Calcineurin-like phosphoesterase AVS42_RS19255 PF04545 Sigma-70, region 4 AVS42_RS19255 PF00140 Sigma-70 factor, region 1.2 AVS42_RS19255 PF04542 Sigma-70 region 2 AVS42_RS19265 PF00756 Putative esterase AVS42_RS19270 PF08240 Alcohol dehydrogenase GroES-like domain AVS42_RS19270 PF00107 Zinc-binding dehydrogenase AVS42_RS19280 PF00310 Glutamine amidotransferases class-II AVS42_RS19280 PF01493 GXGXG motif AVS42_RS19280 PF01645 Conserved region in glutamate synthase AVS42_RS19280 PF04898 Glutamate synthase central domain AVS42_RS19285 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVS42_RS19285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS42_RS19290 PF03922 OmpW family AVS42_RS19295 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS19300 PF00005 ABC transporter AVS42_RS19305 PF02405 Permease MlaE AVS42_RS19310 PF02470 MlaD protein AVS42_RS19315 PF04333 MlaA lipoprotein AVS42_RS19325 PF00005 ABC transporter AVS42_RS19330 PF01061 ABC-2 type transporter AVS42_RS19340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVS42_RS19345 PF01634 ATP phosphoribosyltransferase AVS42_RS19350 PF00815 Histidinol dehydrogenase AVS42_RS19355 PF00155 Aminotransferase class I and II AVS42_RS19360 PF00475 Imidazoleglycerol-phosphate dehydratase AVS42_RS19365 PF00117 Glutamine amidotransferase class-I AVS42_RS19370 PF00977 Histidine biosynthesis protein AVS42_RS19375 PF00977 Histidine biosynthesis protein AVS42_RS19380 PF01502 Phosphoribosyl-AMP cyclohydrolase AVS42_RS19385 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVS42_RS19390 PF01230 HIT domain AVS42_RS19395 PF02416 mttA/Hcf106 family AVS42_RS19400 PF02416 mttA/Hcf106 family AVS42_RS19405 PF00902 Sec-independent protein translocase protein (TatC) AVS42_RS19415 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS19420 PF02917 Pertussis toxin, subunit 1 AVS42_RS19425 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS42_RS19425 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS42_RS19430 PF09275 Pertussis toxin S4 subunit AVS42_RS19435 PF09276 Pertussis toxin S5 subunit AVS42_RS19440 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS42_RS19440 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS42_RS19445 PF04956 TrbC/VIRB2 family AVS42_RS19450 PF05101 Type IV secretory pathway, VirB3-like protein AVS42_RS19455 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVS42_RS19460 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVS42_RS19470 PF04335 VirB8 protein AVS42_RS19475 PF03524 Conjugal transfer protein AVS42_RS19480 PF03743 Bacterial conjugation TrbI-like protein AVS42_RS19485 PF00437 Type II/IV secretion system protein AVS42_RS19495 PF00892 EamA-like transporter family AVS42_RS19515 PF01926 50S ribosome-binding GTPase AVS42_RS19515 PF12631 MnmE helical domain AVS42_RS19515 PF10396 GTP-binding protein TrmE N-terminus AVS42_RS19520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS19525 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS19530 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS42_RS19530 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS19535 PF00005 ABC transporter AVS42_RS19535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS19545 PF01960 ArgJ family AVS42_RS19555 PF00293 NUDIX domain AVS42_RS19575 PF02321 Outer membrane efflux protein AVS42_RS19580 PF00873 AcrB/AcrD/AcrF family AVS42_RS19585 PF00873 AcrB/AcrD/AcrF family AVS42_RS19590 PF13533 Biotin-lipoyl like AVS42_RS19595 PF07072 Cell division protein AVS42_RS19600 PF01121 Dephospho-CoA kinase AVS42_RS19605 PF01478 Type IV leader peptidase family AVS42_RS19605 PF06750 Bacterial Peptidase A24 N-terminal domain AVS42_RS19620 PF02569 Pantoate-beta-alanine ligase AVS42_RS19625 PF02616 Segregation and condensation protein ScpA AVS42_RS19635 PF07690 Major Facilitator Superfamily AVS42_RS19640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVS42_RS19640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVS42_RS19650 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS19655 PF00005 ABC transporter AVS42_RS19660 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS19665 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS19670 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS42_RS19675 PF00005 ABC transporter AVS42_RS19680 PF18075 FtsX extracellular domain AVS42_RS19685 PF03975 CheD chemotactic sensory transduction AVS42_RS19695 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS42_RS19695 PF00633 Helix-hairpin-helix motif AVS42_RS19695 PF10576 Iron-sulfur binding domain of endonuclease III AVS42_RS19695 PF14815 NUDIX domain AVS42_RS19705 PF08241 Methyltransferase domain AVS42_RS19715 PF02515 CoA-transferase family III AVS42_RS19720 PF02515 CoA-transferase family III AVS42_RS19730 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS19735 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS19740 PF00881 Nitroreductase family AVS42_RS19750 PF00682 HMGL-like AVS42_RS19755 PF00378 Enoyl-CoA hydratase/isomerase AVS42_RS19760 PF02515 CoA-transferase family III AVS42_RS19765 PF03401 Tripartite tricarboxylate transporter family receptor AVS42_RS19775 PF00199 Catalase AVS42_RS19775 PF06628 Catalase-related immune-responsive AVS42_RS19780 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS19785 PF00005 ABC transporter AVS42_RS19795 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS42_RS19800 PF01546 Peptidase family M20/M25/M40 AVS42_RS19800 PF07687 Peptidase dimerisation domain AVS42_RS19805 PF00005 ABC transporter AVS42_RS19805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS19810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS42_RS19810 PF00005 ABC transporter AVS42_RS19815 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS19815 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS42_RS19820 PF00528 Binding-protein-dependent transport system inner membrane component AVS42_RS19825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS42_RS19830 PF12631 MnmE helical domain AVS42_RS19830 PF01926 50S ribosome-binding GTPase AVS42_RS19830 PF10396 GTP-binding protein TrmE N-terminus AVS42_RS19840 PF00486 Transcriptional regulatory protein, C terminal AVS42_RS19840 PF00072 Response regulator receiver domain AVS42_RS19845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS42_RS19845 PF00512 His Kinase A (phospho-acceptor) domain AVS42_RS19860 PF01970 Tripartite tricarboxylate transporter TctA family AVS42_RS19865 PF00155 Aminotransferase class I and II AVS42_RS19870 PF00313 'Cold-shock' DNA-binding domain