locus-tag class description RD16_RS00005 PF13932 GidA associated domain RD16_RS00005 PF01134 Glucose inhibited division protein A RD16_RS00010 PF02527 rRNA small subunit methyltransferase G RD16_RS00015 PF13614 AAA domain RD16_RS00025 PF02195 ParB-like nuclease domain RD16_RS00025 PF17762 HTH domain found in ParB protein RD16_RS00030 PF00710 Asparaginase, N-terminal RD16_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain RD16_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain RD16_RS00035 PF00710 Asparaginase, N-terminal RD16_RS00055 PF03144 Elongation factor Tu domain 2 RD16_RS00055 PF00009 Elongation factor Tu GTP binding domain RD16_RS00055 PF03143 Elongation factor Tu C-terminal domain RD16_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RD16_RS00070 PF00467 KOW motif RD16_RS00070 PF02357 Transcription termination factor nusG RD16_RS00075 PF03946 Ribosomal protein L11, N-terminal domain RD16_RS00075 PF00298 Ribosomal protein L11, RNA binding domain RD16_RS00080 PF00687 Ribosomal protein L1p/L10e family RD16_RS00085 PF00466 Ribosomal protein L10 RD16_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain RD16_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain RD16_RS00095 PF04565 RNA polymerase Rpb2, domain 3 RD16_RS00095 PF00562 RNA polymerase Rpb2, domain 6 RD16_RS00095 PF04560 RNA polymerase Rpb2, domain 7 RD16_RS00095 PF04563 RNA polymerase beta subunit RD16_RS00095 PF10385 RNA polymerase beta subunit external 1 domain RD16_RS00095 PF04561 RNA polymerase Rpb2, domain 2 RD16_RS00100 PF04997 RNA polymerase Rpb1, domain 1 RD16_RS00100 PF00623 RNA polymerase Rpb1, domain 2 RD16_RS00100 PF04983 RNA polymerase Rpb1, domain 3 RD16_RS00100 PF05000 RNA polymerase Rpb1, domain 4 RD16_RS00100 PF04998 RNA polymerase Rpb1, domain 5 RD16_RS00130 PF00072 Response regulator receiver domain RD16_RS00130 PF00486 Transcriptional regulatory protein, C terminal RD16_RS00140 PF02515 CoA-transferase family III RD16_RS00155 PF01575 MaoC like domain RD16_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS00160 PF03466 LysR substrate binding domain RD16_RS00165 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit RD16_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit RD16_RS00190 PF05746 DALR anticodon binding domain RD16_RS00200 PF01553 Acyltransferase RD16_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD16_RS00215 PF01327 Polypeptide deformylase RD16_RS00255 PF02615 Malate/L-lactate dehydrogenase RD16_RS00260 PF00561 alpha/beta hydrolase fold RD16_RS00265 PF00561 alpha/beta hydrolase fold RD16_RS00265 PF07021 Methionine biosynthesis protein MetW RD16_RS00275 PF07690 Major Facilitator Superfamily RD16_RS00285 PF01177 Asp/Glu/Hydantoin racemase RD16_RS00290 PF00005 ABC transporter RD16_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS00335 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS00350 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS00350 PF00970 Oxidoreductase FAD-binding domain RD16_RS00350 PF00175 Oxidoreductase NAD-binding domain RD16_RS00355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS00365 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS00395 PF00183 Hsp90 protein RD16_RS00400 PF13417 Glutathione S-transferase, N-terminal domain RD16_RS00400 PF00043 Glutathione S-transferase, C-terminal domain RD16_RS00405 PF01510 N-acetylmuramoyl-L-alanine amidase RD16_RS00415 PF01578 Cytochrome C assembly protein RD16_RS00420 PF00448 SRP54-type protein, GTPase domain RD16_RS00420 PF02881 SRP54-type protein, helical bundle domain RD16_RS00420 PF02978 Signal peptide binding domain RD16_RS00435 PF02719 Polysaccharide biosynthesis protein RD16_RS00445 PF10997 Alternate to MurJ RD16_RS00450 PF00534 Glycosyl transferases group 1 RD16_RS00450 PF00862 Sucrose synthase RD16_RS00455 PF02397 Bacterial sugar transferase RD16_RS00460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD16_RS00470 PF02350 UDP-N-acetylglucosamine 2-epimerase RD16_RS00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD16_RS00480 PF00132 Bacterial transferase hexapeptide (six repeats) RD16_RS00485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD16_RS00485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD16_RS00490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD16_RS00495 PF00534 Glycosyl transferases group 1 RD16_RS00495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RD16_RS00505 PF03309 Type III pantothenate kinase RD16_RS00515 PF02405 Permease MlaE RD16_RS00520 PF00005 ABC transporter RD16_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain RD16_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase RD16_RS00550 PF01063 Amino-transferase class IV RD16_RS00555 PF04359 Protein of unknown function (DUF493) RD16_RS00560 PF03099 Biotin/lipoate A/B protein ligase family RD16_RS00565 PF04055 Radical SAM superfamily RD16_RS00565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RD16_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RD16_RS00575 PF04321 RmlD substrate binding domain RD16_RS00580 PF16363 GDP-mannose 4,6 dehydratase RD16_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme RD16_RS00600 PF01323 DSBA-like thioredoxin domain RD16_RS00600 PF00085 Thioredoxin RD16_RS00610 PF00750 tRNA synthetases class I (R) RD16_RS00610 PF05746 DALR anticodon binding domain RD16_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain RD16_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS00640 PF13416 Bacterial extracellular solute-binding protein RD16_RS00645 PF00005 ABC transporter RD16_RS00645 PF17912 MalK OB fold domain RD16_RS00650 PF00149 Calcineurin-like phosphoesterase RD16_RS00665 PF00005 ABC transporter RD16_RS00665 PF12857 TOBE-like domain RD16_RS00670 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS00685 PF00356 Bacterial regulatory proteins, lacI family RD16_RS00695 PF01425 Amidase RD16_RS00700 PF00682 HMGL-like RD16_RS00700 PF08502 LeuA allosteric (dimerisation) domain RD16_RS00710 PF04552 Sigma-54, DNA binding domain RD16_RS00710 PF04963 Sigma-54 factor, core binding domain RD16_RS00710 PF00309 Sigma-54 factor, Activator interacting domain (AID) RD16_RS00720 PF03466 LysR substrate binding domain RD16_RS00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS00735 PF13609 Gram-negative porin RD16_RS00740 PF00291 Pyridoxal-phosphate dependent enzyme RD16_RS00740 PF00585 C-terminal regulatory domain of Threonine dehydratase RD16_RS00755 PF07729 FCD domain RD16_RS00755 PF00392 Bacterial regulatory proteins, gntR family RD16_RS00760 PF02515 CoA-transferase family III RD16_RS00770 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS00775 PF01494 FAD binding domain RD16_RS00780 PF01494 FAD binding domain RD16_RS00785 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS00795 PF03746 LamB/YcsF family RD16_RS00800 PF02626 Carboxyltransferase domain, subdomain A and B RD16_RS00805 PF02682 Carboxyltransferase domain, subdomain C and D RD16_RS00815 PF03466 LysR substrate binding domain RD16_RS00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS00820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD16_RS00820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD16_RS00820 PF01842 ACT domain RD16_RS00830 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS00830 PF00672 HAMP domain RD16_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS00835 PF00072 Response regulator receiver domain RD16_RS00835 PF00486 Transcriptional regulatory protein, C terminal RD16_RS00840 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS00840 PF00989 PAS fold RD16_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS00840 PF11808 Phosphate regulon sensor protein PhoR RD16_RS00845 PF00486 Transcriptional regulatory protein, C terminal RD16_RS00845 PF00072 Response regulator receiver domain RD16_RS00850 PF01209 ubiE/COQ5 methyltransferase family RD16_RS00865 PF03109 ABC1 family RD16_RS00880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS00880 PF00005 ABC transporter RD16_RS00885 PF04536 TPM domain RD16_RS00895 PF00270 DEAD/DEAH box helicase RD16_RS00895 PF00271 Helicase conserved C-terminal domain RD16_RS00900 PF01810 LysE type translocator RD16_RS00905 PF00009 Elongation factor Tu GTP binding domain RD16_RS00905 PF03144 Elongation factor Tu domain 2 RD16_RS00905 PF16658 Class II release factor RF3, C-terminal domain RD16_RS00915 PF00210 Ferritin-like domain RD16_RS00940 PF00581 Rhodanese-like domain RD16_RS00940 PF17773 UPF0176 acylphosphatase like domain RD16_RS00945 PF01588 Putative tRNA binding domain RD16_RS00945 PF09334 tRNA synthetases class I (M) RD16_RS00955 PF10609 NUBPL iron-transfer P-loop NTPase RD16_RS00970 PF00692 dUTPase RD16_RS00995 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RD16_RS00995 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RD16_RS00995 PF01276 Orn/Lys/Arg decarboxylase, major domain RD16_RS01010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD16_RS01010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD16_RS01015 PF02535 ZIP Zinc transporter RD16_RS01020 PF01571 Aminomethyltransferase folate-binding domain RD16_RS01020 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD16_RS01025 PF01597 Glycine cleavage H-protein RD16_RS01030 PF02347 Glycine cleavage system P-protein RD16_RS01035 PF00392 Bacterial regulatory proteins, gntR family RD16_RS01035 PF07729 FCD domain RD16_RS01040 PF02515 CoA-transferase family III RD16_RS01050 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS01065 PF09518 HindIII restriction endonuclease RD16_RS01070 PF02355 Protein export membrane protein RD16_RS01070 PF07549 SecD/SecF GG Motif RD16_RS01075 PF13667 ThiC-associated domain RD16_RS01075 PF01964 Radical SAM ThiC family RD16_RS01080 PF00171 Aldehyde dehydrogenase family RD16_RS01085 PF01565 FAD binding domain RD16_RS01085 PF02913 FAD linked oxidases, C-terminal domain RD16_RS01115 PF06508 Queuosine biosynthesis protein QueC RD16_RS01120 PF00311 Phosphoenolpyruvate carboxylase RD16_RS01125 PF03797 Autotransporter beta-domain RD16_RS01125 PF00082 Subtilase family RD16_RS01130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD16_RS01130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD16_RS01135 PF02667 Short chain fatty acid transporter RD16_RS01145 PF09339 IclR helix-turn-helix domain RD16_RS01145 PF01614 Bacterial transcriptional regulator RD16_RS01150 PF01144 Coenzyme A transferase RD16_RS01155 PF01144 Coenzyme A transferase RD16_RS01160 PF02426 Muconolactone delta-isomerase RD16_RS01170 PF12146 Serine aminopeptidase, S33 RD16_RS01200 PF02627 Carboxymuconolactone decarboxylase family RD16_RS01205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD16_RS01205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD16_RS01210 PF07702 UTRA domain RD16_RS01210 PF00392 Bacterial regulatory proteins, gntR family RD16_RS01215 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS01220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS01230 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS01235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RD16_RS01240 PF01743 Poly A polymerase head domain RD16_RS01240 PF12626 Polymerase A arginine-rich C-terminus RD16_RS01240 PF12627 Probable RNA and SrmB- binding site of polymerase A RD16_RS01250 PF00308 Bacterial dnaA protein RD16_RS01255 PF02769 AIR synthase related protein, C-terminal domain RD16_RS01255 PF00586 AIR synthase related protein, N-terminal domain RD16_RS01265 PF08676 MutL C terminal dimerisation domain RD16_RS01265 PF01119 DNA mismatch repair protein, C-terminal domain RD16_RS01270 PF09335 SNARE associated Golgi protein RD16_RS01275 PF01520 N-acetylmuramoyl-L-alanine amidase RD16_RS01275 PF11741 AMIN domain RD16_RS01280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RD16_RS01285 PF10415 Fumarase C C-terminus RD16_RS01285 PF00206 Lyase RD16_RS01295 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS01300 PF03466 LysR substrate binding domain RD16_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS01310 PF02515 CoA-transferase family III RD16_RS01315 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS01320 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS01320 PF18158 Adaptive response protein AidB N-terminal domain RD16_RS01340 PF01654 Cytochrome bd terminal oxidase subunit I RD16_RS01345 PF02322 Cytochrome bd terminal oxidase subunit II RD16_RS01350 PF08173 Membrane bound YbgT-like protein RD16_RS01355 PF00664 ABC transporter transmembrane region RD16_RS01355 PF00005 ABC transporter RD16_RS01360 PF00005 ABC transporter RD16_RS01360 PF00664 ABC transporter transmembrane region RD16_RS01365 PF00156 Phosphoribosyl transferase domain RD16_RS01380 PF13609 Gram-negative porin RD16_RS01405 PF04386 Stringent starvation protein B RD16_RS01410 PF02798 Glutathione S-transferase, N-terminal domain RD16_RS01410 PF00043 Glutathione S-transferase, C-terminal domain RD16_RS01415 PF02167 Cytochrome C1 family RD16_RS01420 PF00032 Cytochrome b(C-terminal)/b6/petD RD16_RS01420 PF00033 Cytochrome b/b6/petB RD16_RS01425 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RD16_RS01425 PF00355 Rieske [2Fe-2S] domain RD16_RS01430 PF01741 Large-conductance mechanosensitive channel, MscL RD16_RS01435 PF01784 NIF3 (NGG1p interacting factor 3) RD16_RS01440 PF13180 PDZ domain RD16_RS01450 PF04299 Putative FMN-binding domain RD16_RS01455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD16_RS01460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS01465 PF07859 alpha/beta hydrolase fold RD16_RS01475 PF08502 LeuA allosteric (dimerisation) domain RD16_RS01475 PF00682 HMGL-like RD16_RS01480 PF12833 Helix-turn-helix domain RD16_RS01485 PF00920 Dehydratase family RD16_RS01490 PF07690 Major Facilitator Superfamily RD16_RS01495 PF03466 LysR substrate binding domain RD16_RS01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS01505 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) RD16_RS01535 PF07859 alpha/beta hydrolase fold RD16_RS01545 PF02653 Branched-chain amino acid transport system / permease component RD16_RS01550 PF11862 Domain of unknown function (DUF3382) RD16_RS01550 PF02653 Branched-chain amino acid transport system / permease component RD16_RS01555 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS01555 PF00005 ABC transporter RD16_RS01560 PF00005 ABC transporter RD16_RS01575 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS01580 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS01580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS01580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS01585 PF13193 AMP-binding enzyme C-terminal domain RD16_RS01585 PF00501 AMP-binding enzyme RD16_RS01605 PF00202 Aminotransferase class-III RD16_RS01610 PF02581 Thiamine monophosphate synthase RD16_RS01615 PF08543 Phosphomethylpyrimidine kinase RD16_RS01620 PF00301 Rubredoxin RD16_RS01625 PF02622 Uncharacterized ACR, COG1678 RD16_RS01630 PF03652 Holliday junction resolvase RD16_RS01635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD16_RS01635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD16_RS01640 PF01979 Amidohydrolase family RD16_RS01645 PF01553 Acyltransferase RD16_RS01650 PF00149 Calcineurin-like phosphoesterase RD16_RS01660 PF00912 Transglycosylase RD16_RS01675 PF13193 AMP-binding enzyme C-terminal domain RD16_RS01675 PF00501 AMP-binding enzyme RD16_RS01680 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS01695 PF12706 Beta-lactamase superfamily domain RD16_RS01700 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS01720 PF00990 Diguanylate cyclase, GGDEF domain RD16_RS01720 PF03707 Bacterial signalling protein N terminal repeat RD16_RS01720 PF00563 EAL domain RD16_RS01725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD16_RS01725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RD16_RS01730 PF13532 2OG-Fe(II) oxygenase superfamily RD16_RS01735 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA RD16_RS01740 PF04463 Protein of unknown function (DUF523) RD16_RS01745 PF00005 ABC transporter RD16_RS01750 PF01032 FecCD transport family RD16_RS01755 PF01497 Periplasmic binding protein RD16_RS01760 PF05171 Haemin-degrading HemS.ChuX domain RD16_RS01765 PF00593 TonB dependent receptor RD16_RS01765 PF07715 TonB-dependent Receptor Plug Domain RD16_RS01765 PF04886 PT repeat RD16_RS01770 PF16220 Domain of unknown function (DUF4880) RD16_RS01770 PF04773 FecR protein RD16_RS01775 PF04542 Sigma-70 region 2 RD16_RS01775 PF08281 Sigma-70, region 4 RD16_RS01800 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD16_RS01810 PF00392 Bacterial regulatory proteins, gntR family RD16_RS01810 PF07729 FCD domain RD16_RS01830 PF00171 Aldehyde dehydrogenase family RD16_RS01840 PF00175 Oxidoreductase NAD-binding domain RD16_RS01840 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS01840 PF00970 Oxidoreductase FAD-binding domain RD16_RS01865 PF03458 UPF0126 domain RD16_RS01870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD16_RS01870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD16_RS01875 PF03372 Endonuclease/Exonuclease/phosphatase family RD16_RS01880 PF00156 Phosphoribosyl transferase domain RD16_RS01885 PF02637 GatB domain RD16_RS01885 PF02934 GatB/GatE catalytic domain RD16_RS01890 PF01425 Amidase RD16_RS01895 PF02686 Glu-tRNAGln amidotransferase C subunit RD16_RS01905 PF04085 rod shape-determining protein MreC RD16_RS01915 PF00905 Penicillin binding protein transpeptidase domain RD16_RS01915 PF03717 Penicillin-binding Protein dimerisation domain RD16_RS01920 PF01098 Cell cycle protein RD16_RS01925 PF02615 Malate/L-lactate dehydrogenase RD16_RS01930 PF00939 Sodium:sulfate symporter transmembrane region RD16_RS01935 PF00440 Bacterial regulatory proteins, tetR family RD16_RS01945 PF00696 Amino acid kinase family RD16_RS01950 PF03180 NLPA lipoprotein RD16_RS01955 PF00578 AhpC/TSA family RD16_RS01960 PF04972 BON domain RD16_RS01965 PF13580 SIS domain RD16_RS01970 PF02021 Uncharacterised protein family UPF0102 RD16_RS01975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD16_RS01980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RD16_RS01980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD16_RS01990 PF00892 EamA-like transporter family RD16_RS01995 PF01810 LysE type translocator RD16_RS02000 PF12146 Serine aminopeptidase, S33 RD16_RS02015 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RD16_RS02020 PF00535 Glycosyl transferase family 2 RD16_RS02035 PF03616 Sodium/glutamate symporter RD16_RS02045 PF02667 Short chain fatty acid transporter RD16_RS02060 PF00929 Exonuclease RD16_RS02065 PF00873 AcrB/AcrD/AcrF family RD16_RS02075 PF00009 Elongation factor Tu GTP binding domain RD16_RS02075 PF03144 Elongation factor Tu domain 2 RD16_RS02075 PF00679 Elongation factor G C-terminus RD16_RS02075 PF14492 Elongation Factor G, domain II RD16_RS02075 PF03764 Elongation factor G, domain IV RD16_RS02080 PF00582 Universal stress protein family RD16_RS02090 PF00155 Aminotransferase class I and II RD16_RS02090 PF00392 Bacterial regulatory proteins, gntR family RD16_RS02095 PF00679 Elongation factor G C-terminus RD16_RS02095 PF14492 Elongation Factor G, domain II RD16_RS02095 PF03144 Elongation factor Tu domain 2 RD16_RS02095 PF00009 Elongation factor Tu GTP binding domain RD16_RS02095 PF03764 Elongation factor G, domain IV RD16_RS02100 PF02308 MgtC family RD16_RS02105 PF03471 Transporter associated domain RD16_RS02105 PF03741 Integral membrane protein TerC family RD16_RS02110 PF02515 CoA-transferase family III RD16_RS02115 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS02120 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS02125 PF03466 LysR substrate binding domain RD16_RS02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS02130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS02130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS02130 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS02140 PF02803 Thiolase, C-terminal domain RD16_RS02140 PF00108 Thiolase, N-terminal domain RD16_RS02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS02155 PF03466 LysR substrate binding domain RD16_RS02160 PF00313 'Cold-shock' DNA-binding domain RD16_RS02170 PF00392 Bacterial regulatory proteins, gntR family RD16_RS02170 PF07729 FCD domain RD16_RS02175 PF00171 Aldehyde dehydrogenase family RD16_RS02180 PF02667 Short chain fatty acid transporter RD16_RS02185 PF00970 Oxidoreductase FAD-binding domain RD16_RS02185 PF00042 Globin RD16_RS02185 PF00175 Oxidoreductase NAD-binding domain RD16_RS02190 PF01042 Endoribonuclease L-PSP RD16_RS02195 PF03466 LysR substrate binding domain RD16_RS02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS02215 PF02515 CoA-transferase family III RD16_RS02225 PF03466 LysR substrate binding domain RD16_RS02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS02230 PF02515 CoA-transferase family III RD16_RS02245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS02245 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS02245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS02250 PF00376 MerR family regulatory protein RD16_RS02250 PF09278 MerR, DNA binding RD16_RS02265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS02265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS02265 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS02275 PF00108 Thiolase, N-terminal domain RD16_RS02275 PF02803 Thiolase, C-terminal domain RD16_RS02280 PF01039 Carboxyl transferase domain RD16_RS02285 PF00364 Biotin-requiring enzyme RD16_RS02285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD16_RS02285 PF00289 Biotin carboxylase, N-terminal domain RD16_RS02285 PF02785 Biotin carboxylase C-terminal domain RD16_RS02295 PF00202 Aminotransferase class-III RD16_RS02300 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS02305 PF14031 Putative serine dehydratase domain RD16_RS02305 PF01168 Alanine racemase, N-terminal domain RD16_RS02310 PF16868 NMT1-like family RD16_RS02320 PF07715 TonB-dependent Receptor Plug Domain RD16_RS02320 PF00593 TonB dependent receptor RD16_RS02325 PF04361 Protein of unknown function (DUF494) RD16_RS02340 PF01131 DNA topoisomerase RD16_RS02340 PF01751 Toprim domain RD16_RS02350 PF00005 ABC transporter RD16_RS02355 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS02365 PF00171 Aldehyde dehydrogenase family RD16_RS02375 PF00205 Thiamine pyrophosphate enzyme, central domain RD16_RS02375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS02375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS02380 PF01037 Lrp/AsnC ligand binding domain RD16_RS02385 PF01062 Bestrophin, RFP-TM, chloride channel RD16_RS02395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD16_RS02415 PF12111 Polyribonucleotide phosphorylase C terminal RD16_RS02415 PF00575 S1 RNA binding domain RD16_RS02415 PF10150 Ribonuclease E/G family RD16_RS02420 PF00849 RNA pseudouridylate synthase RD16_RS02420 PF01479 S4 domain RD16_RS02425 PF13419 Haloacid dehalogenase-like hydrolase RD16_RS02430 PF00174 Oxidoreductase molybdopterin binding domain RD16_RS02435 PF01794 Ferric reductase like transmembrane component RD16_RS02455 PF01070 FMN-dependent dehydrogenase RD16_RS02465 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS02470 PF01425 Amidase RD16_RS02475 PF09339 IclR helix-turn-helix domain RD16_RS02475 PF01614 Bacterial transcriptional regulator RD16_RS02480 PF18053 DNA gyrase B subunit insert domain RD16_RS02480 PF00204 DNA gyrase B RD16_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS02480 PF01751 Toprim domain RD16_RS02480 PF00986 DNA gyrase B subunit, carboxyl terminus RD16_RS02485 PF02767 DNA polymerase III beta subunit, central domain RD16_RS02485 PF02768 DNA polymerase III beta subunit, C-terminal domain RD16_RS02485 PF00712 DNA polymerase III beta subunit, N-terminal domain RD16_RS02490 PF08299 Bacterial dnaA protein helix-turn-helix RD16_RS02490 PF00308 Bacterial dnaA protein RD16_RS02490 PF11638 DnaA N-terminal domain RD16_RS02495 PF00468 Ribosomal protein L34 RD16_RS02500 PF00825 Ribonuclease P RD16_RS02505 PF01809 Putative membrane protein insertion efficiency factor RD16_RS02510 PF02096 60Kd inner membrane protein RD16_RS02510 PF14849 YidC periplasmic domain RD16_RS02520 PF02525 Flavodoxin-like fold RD16_RS02525 PF03466 LysR substrate binding domain RD16_RS02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS02540 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS02545 PF00589 Phage integrase family RD16_RS02580 PF03837 RecT family RD16_RS02625 PF01042 Endoribonuclease L-PSP RD16_RS02635 PF01145 SPFH domain / Band 7 family RD16_RS02640 PF07411 Domain of unknown function (DUF1508) RD16_RS02645 PF01168 Alanine racemase, N-terminal domain RD16_RS02645 PF14031 Putative serine dehydratase domain RD16_RS02655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS02655 PF03466 LysR substrate binding domain RD16_RS02675 PF12951 Passenger-associated-transport-repeat RD16_RS02675 PF12951 Passenger-associated-transport-repeat RD16_RS02685 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS02690 PF00501 AMP-binding enzyme RD16_RS02690 PF13193 AMP-binding enzyme C-terminal domain RD16_RS02695 PF01614 Bacterial transcriptional regulator RD16_RS02695 PF09339 IclR helix-turn-helix domain RD16_RS02700 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS02705 PF02627 Carboxymuconolactone decarboxylase family RD16_RS02710 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS02720 PF00491 Arginase family RD16_RS02725 PF00202 Aminotransferase class-III RD16_RS02735 PF07729 FCD domain RD16_RS02735 PF00392 Bacterial regulatory proteins, gntR family RD16_RS02740 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS02745 PF01266 FAD dependent oxidoreductase RD16_RS02750 PF01361 Tautomerase enzyme RD16_RS02755 PF18693 TRAM domain RD16_RS02755 PF00919 Uncharacterized protein family UPF0004 RD16_RS02755 PF04055 Radical SAM superfamily RD16_RS02765 PF03641 Possible lysine decarboxylase RD16_RS02775 PF13419 Haloacid dehalogenase-like hydrolase RD16_RS02785 PF00551 Formyl transferase RD16_RS02785 PF02911 Formyl transferase, C-terminal domain RD16_RS02790 PF01327 Polypeptide deformylase RD16_RS02795 PF00266 Aminotransferase class-V RD16_RS02800 PF01037 Lrp/AsnC ligand binding domain RD16_RS02805 PF02481 DNA recombination-mediator protein A RD16_RS02805 PF17782 DprA winged helix domain RD16_RS02810 PF00682 HMGL-like RD16_RS02820 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS02825 PF00155 Aminotransferase class I and II RD16_RS02830 PF01168 Alanine racemase, N-terminal domain RD16_RS02835 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS02845 PF03466 LysR substrate binding domain RD16_RS02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS02850 PF01810 LysE type translocator RD16_RS02865 PF01958 Domain of unknown function DUF108 RD16_RS02865 PF03447 Homoserine dehydrogenase, NAD binding domain RD16_RS02875 PF01029 NusB family RD16_RS02875 PF01189 16S rRNA methyltransferase RsmB/F RD16_RS02885 PF00989 PAS fold RD16_RS02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS02885 PF00672 HAMP domain RD16_RS02885 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS02890 PF02954 Bacterial regulatory protein, Fis family RD16_RS02890 PF00072 Response regulator receiver domain RD16_RS02890 PF00158 Sigma-54 interaction domain RD16_RS02895 PF02254 TrkA-N domain RD16_RS02895 PF02080 TrkA-C domain RD16_RS02900 PF02386 Cation transport protein RD16_RS02905 PF01047 MarR family RD16_RS02915 PF12804 MobA-like NTP transferase domain RD16_RS02925 PF17645 Arylmalonate decarboxylase RD16_RS02930 PF00561 alpha/beta hydrolase fold RD16_RS02940 PF00857 Isochorismatase family RD16_RS02950 PF00355 Rieske [2Fe-2S] domain RD16_RS02950 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD16_RS02955 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS02955 PF14759 Reductase C-terminal RD16_RS02960 PF00355 Rieske [2Fe-2S] domain RD16_RS02965 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS02970 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD16_RS02970 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD16_RS02975 PF00941 FAD binding domain in molybdopterin dehydrogenase RD16_RS02975 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD16_RS02980 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS02980 PF01799 [2Fe-2S] binding domain RD16_RS02990 PF00005 ABC transporter RD16_RS02995 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS03005 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS03010 PF04107 Glutamate-cysteine ligase family 2(GCS2) RD16_RS03015 PF08241 Methyltransferase domain RD16_RS03025 PF00588 SpoU rRNA Methylase family RD16_RS03030 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03035 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RD16_RS03035 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RD16_RS03040 PF02556 Preprotein translocase subunit SecB RD16_RS03045 PF00462 Glutaredoxin RD16_RS03050 PF00581 Rhodanese-like domain RD16_RS03050 PF12368 Rhodanase C-terminal RD16_RS03050 PF17773 UPF0176 acylphosphatase like domain RD16_RS03055 PF00300 Histidine phosphatase superfamily (branch 1) RD16_RS03060 PF01551 Peptidase family M23 RD16_RS03065 PF13180 PDZ domain RD16_RS03065 PF03572 Peptidase family S41 RD16_RS03070 PF00899 ThiF family RD16_RS03080 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03095 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03110 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS03110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD16_RS03115 PF00005 ABC transporter RD16_RS03120 PF00005 ABC transporter RD16_RS03120 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS03125 PF02653 Branched-chain amino acid transport system / permease component RD16_RS03130 PF13458 Periplasmic binding protein RD16_RS03140 PF13193 AMP-binding enzyme C-terminal domain RD16_RS03140 PF00501 AMP-binding enzyme RD16_RS03145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS03145 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS03145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS03150 PF00364 Biotin-requiring enzyme RD16_RS03150 PF02817 e3 binding domain RD16_RS03150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD16_RS03155 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS03160 PF02780 Transketolase, C-terminal domain RD16_RS03160 PF02779 Transketolase, pyrimidine binding domain RD16_RS03165 PF00676 Dehydrogenase E1 component RD16_RS03175 PF13607 Succinyl-CoA ligase like flavodoxin domain RD16_RS03175 PF13380 CoA binding domain RD16_RS03180 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03185 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS03185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS03185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS03190 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS03195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD16_RS03195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD16_RS03210 PF01575 MaoC like domain RD16_RS03215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS03215 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS03215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS03220 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03225 PF02515 CoA-transferase family III RD16_RS03230 PF03466 LysR substrate binding domain RD16_RS03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS03235 PF00701 Dihydrodipicolinate synthetase family RD16_RS03260 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS03265 PF03466 LysR substrate binding domain RD16_RS03270 PF09330 D-lactate dehydrogenase, membrane binding RD16_RS03270 PF01565 FAD binding domain RD16_RS03275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS03275 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS03275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS03280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS03280 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS03280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS03285 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03290 PF01546 Peptidase family M20/M25/M40 RD16_RS03290 PF07687 Peptidase dimerisation domain RD16_RS03300 PF01042 Endoribonuclease L-PSP RD16_RS03310 PF00107 Zinc-binding dehydrogenase RD16_RS03310 PF08240 Alcohol dehydrogenase GroES-like domain RD16_RS03315 PF03466 LysR substrate binding domain RD16_RS03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS03320 PF13607 Succinyl-CoA ligase like flavodoxin domain RD16_RS03320 PF13380 CoA binding domain RD16_RS03325 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS03335 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03340 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RD16_RS03345 PF01380 SIS domain RD16_RS03350 PF01037 Lrp/AsnC ligand binding domain RD16_RS03355 PF00108 Thiolase, N-terminal domain RD16_RS03355 PF02803 Thiolase, C-terminal domain RD16_RS03360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD16_RS03360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD16_RS03360 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS03365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS03365 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS03365 PF12806 Acetyl-CoA dehydrogenase C-terminal like RD16_RS03365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS03370 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03375 PF13607 Succinyl-CoA ligase like flavodoxin domain RD16_RS03375 PF13380 CoA binding domain RD16_RS03375 PF00583 Acetyltransferase (GNAT) family RD16_RS03390 PF00384 Molybdopterin oxidoreductase RD16_RS03390 PF01568 Molydopterin dinucleotide binding domain RD16_RS03410 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RD16_RS03410 PF01488 Shikimate / quinate 5-dehydrogenase RD16_RS03410 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RD16_RS03415 PF03462 PCRF domain RD16_RS03415 PF00472 RF-1 domain RD16_RS03420 PF17827 PrmC N-terminal domain RD16_RS03420 PF05175 Methyltransferase small domain RD16_RS03425 PF00462 Glutaredoxin RD16_RS03430 PF02441 Flavoprotein RD16_RS03435 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03440 PF09084 NMT1/THI5 like RD16_RS03445 PF00941 FAD binding domain in molybdopterin dehydrogenase RD16_RS03445 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD16_RS03450 PF01799 [2Fe-2S] binding domain RD16_RS03450 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS03455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD16_RS03455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD16_RS03475 PF05036 Sporulation related domain RD16_RS03475 PF03330 Lytic transglycolase RD16_RS03480 PF03668 P-loop ATPase protein family RD16_RS03490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD16_RS03490 PF00034 Cytochrome c RD16_RS03490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD16_RS03495 PF07475 HPr Serine kinase C-terminal domain RD16_RS03495 PF02603 HPr Serine kinase N terminus RD16_RS03500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RD16_RS03505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RD16_RS03510 PF00005 ABC transporter RD16_RS03530 PF00571 CBS domain RD16_RS03530 PF01380 SIS domain RD16_RS03535 PF02222 ATP-grasp domain RD16_RS03535 PF01370 NAD dependent epimerase/dehydratase family RD16_RS03540 PF00593 TonB dependent receptor RD16_RS03540 PF07715 TonB-dependent Receptor Plug Domain RD16_RS03550 PF05199 GMC oxidoreductase RD16_RS03550 PF00732 GMC oxidoreductase RD16_RS03570 PF01336 OB-fold nucleic acid binding domain RD16_RS03570 PF02938 GAD domain RD16_RS03570 PF00152 tRNA synthetases class II (D, K and N) RD16_RS03575 PF03372 Endonuclease/Exonuclease/phosphatase family RD16_RS03580 PF13091 PLD-like domain RD16_RS03615 PF00202 Aminotransferase class-III RD16_RS03620 PF01425 Amidase RD16_RS03625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS03625 PF00005 ABC transporter RD16_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS03640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS03660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD16_RS03665 PF16653 Saccharopine dehydrogenase C-terminal domain RD16_RS03665 PF03435 Saccharopine dehydrogenase NADP binding domain RD16_RS03680 PF04264 YceI-like domain RD16_RS03685 PF07715 TonB-dependent Receptor Plug Domain RD16_RS03685 PF00593 TonB dependent receptor RD16_RS03690 PF04773 FecR protein RD16_RS03690 PF16220 Domain of unknown function (DUF4880) RD16_RS03730 PF01472 PUA domain RD16_RS03730 PF00696 Amino acid kinase family RD16_RS03735 PF01018 GTP1/OBG RD16_RS03735 PF01926 50S ribosome-binding GTPase RD16_RS03740 PF01016 Ribosomal L27 protein RD16_RS03745 PF00829 Ribosomal prokaryotic L21 protein RD16_RS03755 PF00348 Polyprenyl synthetase RD16_RS03765 PF03466 LysR substrate binding domain RD16_RS03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS03770 PF05378 Hydantoinase/oxoprolinase N-terminal region RD16_RS03770 PF01968 Hydantoinase/oxoprolinase RD16_RS03775 PF02538 Hydantoinase B/oxoprolinase RD16_RS03780 PF01266 FAD dependent oxidoreductase RD16_RS03785 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS03790 PF00171 Aldehyde dehydrogenase family RD16_RS03795 PF02794 RTX toxin acyltransferase family RD16_RS03805 PF02382 N-terminal domain in RTX protein RD16_RS03805 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) RD16_RS03805 PF03497 Anthrax toxin LF subunit RD16_RS03810 PF00664 ABC transporter transmembrane region RD16_RS03810 PF00005 ABC transporter RD16_RS03810 PF03412 Peptidase C39 family RD16_RS03815 PF13533 Biotin-lipoyl like RD16_RS03820 PF02321 Outer membrane efflux protein RD16_RS03825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS03825 PF03466 LysR substrate binding domain RD16_RS03830 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS03840 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS03845 PF00005 ABC transporter RD16_RS03850 PF01063 Amino-transferase class IV RD16_RS03870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS03870 PF00205 Thiamine pyrophosphate enzyme, central domain RD16_RS03870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS03875 PF00392 Bacterial regulatory proteins, gntR family RD16_RS03875 PF07729 FCD domain RD16_RS03885 PF00392 Bacterial regulatory proteins, gntR family RD16_RS03885 PF07729 FCD domain RD16_RS03890 PF08240 Alcohol dehydrogenase GroES-like domain RD16_RS03890 PF00107 Zinc-binding dehydrogenase RD16_RS03895 PF00501 AMP-binding enzyme RD16_RS03895 PF13193 AMP-binding enzyme C-terminal domain RD16_RS03905 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS03910 PF00005 ABC transporter RD16_RS03915 PF09084 NMT1/THI5 like RD16_RS03925 PF00205 Thiamine pyrophosphate enzyme, central domain RD16_RS03925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS03925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS03945 PF00205 Thiamine pyrophosphate enzyme, central domain RD16_RS03945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS03945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS03950 PF10369 Small subunit of acetolactate synthase RD16_RS03955 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RD16_RS03955 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RD16_RS03960 PF01066 CDP-alcohol phosphatidyltransferase RD16_RS03970 PF00312 Ribosomal protein S15 RD16_RS03975 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RD16_RS03975 PF00013 KH domain RD16_RS03975 PF00575 S1 RNA binding domain RD16_RS03975 PF03725 3' exoribonuclease family, domain 2 RD16_RS03975 PF01138 3' exoribonuclease family, domain 1 RD16_RS03990 PF00291 Pyridoxal-phosphate dependent enzyme RD16_RS03990 PF13291 ACT domain RD16_RS04005 PF00109 Beta-ketoacyl synthase, N-terminal domain RD16_RS04005 PF14765 Polyketide synthase dehydratase RD16_RS04005 PF00550 Phosphopantetheine attachment site RD16_RS04005 PF08659 KR domain RD16_RS04005 PF00698 Acyl transferase domain RD16_RS04005 PF02801 Beta-ketoacyl synthase, C-terminal domain RD16_RS04005 PF08240 Alcohol dehydrogenase GroES-like domain RD16_RS04005 PF08990 Erythronolide synthase docking RD16_RS04005 PF16197 Ketoacyl-synthetase C-terminal extension RD16_RS04010 PF00121 Triosephosphate isomerase RD16_RS04015 PF03840 Preprotein translocase SecG subunit RD16_RS04025 PF02028 BCCT, betaine/carnitine/choline family transporter RD16_RS04035 PF05034 Methylaspartate ammonia-lyase N-terminus RD16_RS04035 PF07476 Methylaspartate ammonia-lyase C-terminus RD16_RS04040 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS04055 PF14698 Argininosuccinate lyase C-terminal RD16_RS04055 PF00206 Lyase RD16_RS04060 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS04075 PF03466 LysR substrate binding domain RD16_RS04075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS04080 PF01053 Cys/Met metabolism PLP-dependent enzyme RD16_RS04085 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD16_RS04100 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS04105 PF01266 FAD dependent oxidoreductase RD16_RS04115 PF01968 Hydantoinase/oxoprolinase RD16_RS04115 PF05378 Hydantoinase/oxoprolinase N-terminal region RD16_RS04125 PF00127 Copper binding proteins, plastocyanin/azurin family RD16_RS04135 PF02321 Outer membrane efflux protein RD16_RS04140 PF00873 AcrB/AcrD/AcrF family RD16_RS04145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD16_RS04150 PF01638 HxlR-like helix-turn-helix RD16_RS04160 PF02028 BCCT, betaine/carnitine/choline family transporter RD16_RS04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS04165 PF03466 LysR substrate binding domain RD16_RS04170 PF00781 Diacylglycerol kinase catalytic domain RD16_RS04180 PF01569 PAP2 superfamily RD16_RS04205 PF13609 Gram-negative porin RD16_RS04210 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RD16_RS04215 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RD16_RS04220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RD16_RS04225 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RD16_RS04235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD16_RS04235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RD16_RS04235 PF10531 SLBB domain RD16_RS04240 PF00384 Molybdopterin oxidoreductase RD16_RS04240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD16_RS04240 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal RD16_RS04245 PF00146 NADH dehydrogenase RD16_RS04250 PF12838 4Fe-4S dicluster domain RD16_RS04255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RD16_RS04260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD16_RS04265 PF00361 Proton-conducting membrane transporter RD16_RS04265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD16_RS04270 PF00361 Proton-conducting membrane transporter RD16_RS04270 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus RD16_RS04275 PF00361 Proton-conducting membrane transporter RD16_RS04285 PF00593 TonB dependent receptor RD16_RS04285 PF07715 TonB-dependent Receptor Plug Domain RD16_RS04290 PF00593 TonB dependent receptor RD16_RS04290 PF07715 TonB-dependent Receptor Plug Domain RD16_RS04305 PF00205 Thiamine pyrophosphate enzyme, central domain RD16_RS04305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS04305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS04310 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS04315 PF03466 LysR substrate binding domain RD16_RS04325 PF03461 TRCF domain RD16_RS04325 PF00270 DEAD/DEAH box helicase RD16_RS04325 PF00271 Helicase conserved C-terminal domain RD16_RS04325 PF17757 UvrB interaction domain RD16_RS04325 PF02559 CarD-like/TRCF domain RD16_RS04330 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD16_RS04335 PF02542 YgbB family RD16_RS04345 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RD16_RS04350 PF11940 Domain of unknown function (DUF3458) Ig-like fold RD16_RS04350 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RD16_RS04350 PF01433 Peptidase family M1 domain RD16_RS04365 PF00005 ABC transporter RD16_RS04365 PF00664 ABC transporter transmembrane region RD16_RS04370 PF05724 Thiopurine S-methyltransferase (TPMT) RD16_RS04385 PF07238 PilZ domain RD16_RS04385 PF07317 Flagellar regulator YcgR RD16_RS04415 PF00364 Biotin-requiring enzyme RD16_RS04420 PF00682 HMGL-like RD16_RS04420 PF00364 Biotin-requiring enzyme RD16_RS04420 PF02436 Conserved carboxylase domain RD16_RS04440 PF07702 UTRA domain RD16_RS04440 PF00392 Bacterial regulatory proteins, gntR family RD16_RS04445 PF00289 Biotin carboxylase, N-terminal domain RD16_RS04445 PF02785 Biotin carboxylase C-terminal domain RD16_RS04445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD16_RS04450 PF01039 Carboxyl transferase domain RD16_RS04495 PF00664 ABC transporter transmembrane region RD16_RS04495 PF00005 ABC transporter RD16_RS04500 PF00248 Aldo/keto reductase family RD16_RS04505 PF00248 Aldo/keto reductase family RD16_RS04520 PF00149 Calcineurin-like phosphoesterase RD16_RS04525 PF17092 Penicillin-binding protein OB-like domain RD16_RS04525 PF00905 Penicillin binding protein transpeptidase domain RD16_RS04525 PF00912 Transglycosylase RD16_RS04530 PF00326 Prolyl oligopeptidase family RD16_RS04540 PF11799 impB/mucB/samB family C-terminal domain RD16_RS04540 PF11798 IMS family HHH motif RD16_RS04540 PF00817 impB/mucB/samB family RD16_RS04555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS04555 PF03466 LysR substrate binding domain RD16_RS04560 PF09084 NMT1/THI5 like RD16_RS04570 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS04580 PF03972 MmgE/PrpD family RD16_RS04585 PF00171 Aldehyde dehydrogenase family RD16_RS04590 PF00890 FAD binding domain RD16_RS04590 PF14537 Cytochrome c3 RD16_RS04600 PF04303 PrpF protein RD16_RS04615 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD16_RS04625 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS04630 PF03466 LysR substrate binding domain RD16_RS04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS04640 PF00501 AMP-binding enzyme RD16_RS04640 PF13193 AMP-binding enzyme C-terminal domain RD16_RS04665 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS04670 PF03466 LysR substrate binding domain RD16_RS04695 PF07690 Major Facilitator Superfamily RD16_RS04700 PF13419 Haloacid dehalogenase-like hydrolase RD16_RS04710 PF00691 OmpA family RD16_RS04715 PF00521 DNA gyrase/topoisomerase IV, subunit A RD16_RS04715 PF03989 DNA gyrase C-terminal domain, beta-propeller RD16_RS04720 PF00266 Aminotransferase class-V RD16_RS04725 PF00800 Prephenate dehydratase RD16_RS04725 PF01817 Chorismate mutase type II RD16_RS04725 PF01842 ACT domain RD16_RS04730 PF02153 Prephenate dehydrogenase RD16_RS04735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD16_RS04740 PF02224 Cytidylate kinase RD16_RS04745 PF00575 S1 RNA binding domain RD16_RS04750 PF00216 Bacterial DNA-binding protein RD16_RS04760 PF18073 Rubredoxin metal binding domain RD16_RS04765 PF00294 pfkB family carbohydrate kinase RD16_RS04770 PF01370 NAD dependent epimerase/dehydratase family RD16_RS04775 PF10531 SLBB domain RD16_RS04785 PF00291 Pyridoxal-phosphate dependent enzyme RD16_RS04790 PF13406 Transglycosylase SLT domain RD16_RS04795 PF00850 Histone deacetylase domain RD16_RS04800 PF01012 Electron transfer flavoprotein domain RD16_RS04805 PF00766 Electron transfer flavoprotein FAD-binding domain RD16_RS04805 PF01012 Electron transfer flavoprotein domain RD16_RS04810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS04810 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS04810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS04810 PF12806 Acetyl-CoA dehydrogenase C-terminal like RD16_RS04815 PF00578 AhpC/TSA family RD16_RS04815 PF10417 C-terminal domain of 1-Cys peroxiredoxin RD16_RS04830 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS04840 PF00005 ABC transporter RD16_RS04840 PF17850 CysA C-terminal regulatory domain RD16_RS04840 PF12857 TOBE-like domain RD16_RS04845 PF01507 Phosphoadenosine phosphosulfate reductase family RD16_RS04850 PF01507 Phosphoadenosine phosphosulfate reductase family RD16_RS04860 PF04055 Radical SAM superfamily RD16_RS04875 PF01245 Ribosomal protein L19 RD16_RS04880 PF00293 NUDIX domain RD16_RS04885 PF00248 Aldo/keto reductase family RD16_RS04895 PF07690 Major Facilitator Superfamily RD16_RS04900 PF04345 Chorismate lyase RD16_RS04905 PF01479 S4 domain RD16_RS04905 PF00849 RNA pseudouridylate synthase RD16_RS04910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS04910 PF03466 LysR substrate binding domain RD16_RS04915 PF00529 HlyD membrane-fusion protein of T1SS RD16_RS04915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD16_RS04920 PF00873 AcrB/AcrD/AcrF family RD16_RS04925 PF02321 Outer membrane efflux protein RD16_RS04935 PF02630 SCO1/SenC RD16_RS04940 PF01432 Peptidase family M3 RD16_RS04945 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD16_RS04945 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD16_RS04950 PF00196 Bacterial regulatory proteins, luxR family RD16_RS04950 PF00072 Response regulator receiver domain RD16_RS04955 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS04955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS04955 PF00989 PAS fold RD16_RS04960 PF17831 Pyruvate dehydrogenase E1 component middle domain RD16_RS04960 PF00456 Transketolase, thiamine diphosphate binding domain RD16_RS04965 PF02817 e3 binding domain RD16_RS04965 PF00364 Biotin-requiring enzyme RD16_RS04965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD16_RS04970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD16_RS04970 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS04975 PF00669 Bacterial flagellin N-terminal helical region RD16_RS04975 PF00700 Bacterial flagellin C-terminal helical region RD16_RS04985 PF04452 RNA methyltransferase RD16_RS04990 PF02780 Transketolase, C-terminal domain RD16_RS04990 PF02779 Transketolase, pyrimidine binding domain RD16_RS04990 PF00456 Transketolase, thiamine diphosphate binding domain RD16_RS04995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD16_RS04995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD16_RS05000 PF00162 Phosphoglycerate kinase RD16_RS05010 PF00871 Acetokinase family RD16_RS05015 PF01515 Phosphate acetyl/butaryl transferase RD16_RS05020 PF11339 Protein of unknown function (DUF3141) RD16_RS05025 PF02798 Glutathione S-transferase, N-terminal domain RD16_RS05025 PF14834 Glutathione S-transferase, C-terminal domain RD16_RS05045 PF00226 DnaJ domain RD16_RS05045 PF01556 DnaJ C terminal domain RD16_RS05055 PF03591 AzlC protein RD16_RS05060 PF01384 Phosphate transporter family RD16_RS05065 PF00994 Probable molybdopterin binding domain RD16_RS05075 PF01476 LysM domain RD16_RS05075 PF08525 Opacity-associated protein A N-terminal motif RD16_RS05075 PF01551 Peptidase family M23 RD16_RS05085 PF01176 Translation initiation factor 1A / IF-1 RD16_RS05095 PF04542 Sigma-70 region 2 RD16_RS05095 PF04545 Sigma-70, region 4 RD16_RS05095 PF04539 Sigma-70 region 3 RD16_RS05100 PF05247 Flagellar transcriptional activator (FlhD) RD16_RS05105 PF05280 Flagellar transcriptional activator (FlhC) RD16_RS05110 PF01618 MotA/TolQ/ExbB proton channel family RD16_RS05115 PF00691 OmpA family RD16_RS05115 PF13677 Membrane MotB of proton-channel complex MotA/MotB RD16_RS05120 PF00072 Response regulator receiver domain RD16_RS05125 PF01627 Hpt domain RD16_RS05125 PF01584 CheW-like domain RD16_RS05125 PF09078 CheY binding RD16_RS05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS05125 PF02895 Signal transducing histidine kinase, homodimeric domain RD16_RS05130 PF01584 CheW-like domain RD16_RS05135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD16_RS05135 PF00672 HAMP domain RD16_RS05135 PF02203 Tar ligand binding domain homologue RD16_RS05145 PF01339 CheB methylesterase RD16_RS05145 PF00072 Response regulator receiver domain RD16_RS05150 PF00072 Response regulator receiver domain RD16_RS05155 PF04344 Chemotaxis phosphatase, CheZ RD16_RS05180 PF00248 Aldo/keto reductase family RD16_RS05185 PF00795 Carbon-nitrogen hydrolase RD16_RS05190 PF03471 Transporter associated domain RD16_RS05190 PF00571 CBS domain RD16_RS05195 PF02130 Uncharacterized protein family UPF0054 RD16_RS05200 PF02562 PhoH-like protein RD16_RS05205 PF04055 Radical SAM superfamily RD16_RS05205 PF00919 Uncharacterized protein family UPF0004 RD16_RS05205 PF01938 TRAM domain RD16_RS05220 PF07549 SecD/SecF GG Motif RD16_RS05220 PF02355 Protein export membrane protein RD16_RS05225 PF02355 Protein export membrane protein RD16_RS05225 PF13721 SecD export protein N-terminal TM region RD16_RS05225 PF07549 SecD/SecF GG Motif RD16_RS05230 PF02699 Preprotein translocase subunit RD16_RS05240 PF01702 Queuine tRNA-ribosyltransferase RD16_RS05245 PF02547 Queuosine biosynthesis protein RD16_RS05250 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RD16_RS05265 PF03212 Pertactin RD16_RS05265 PF03797 Autotransporter beta-domain RD16_RS05270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD16_RS05270 PF14824 Sirohaem biosynthesis protein central RD16_RS05270 PF10414 Sirohaem synthase dimerisation region RD16_RS05295 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RD16_RS05300 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RD16_RS05300 PF01464 Transglycosylase SLT domain RD16_RS05305 PF00155 Aminotransferase class I and II RD16_RS05315 PF00390 Malic enzyme, N-terminal domain RD16_RS05315 PF03949 Malic enzyme, NAD binding domain RD16_RS05315 PF01515 Phosphate acetyl/butaryl transferase RD16_RS05325 PF01337 Barstar (barnase inhibitor) RD16_RS05340 PF00005 ABC transporter RD16_RS05345 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS05350 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS05355 PF12849 PBP superfamily domain RD16_RS05360 PF02503 Polyphosphate kinase middle domain RD16_RS05360 PF17941 Polyphosphate kinase C-terminal domain 1 RD16_RS05360 PF13089 Polyphosphate kinase N-terminal domain RD16_RS05360 PF13090 Polyphosphate kinase C-terminal domain 2 RD16_RS05365 PF02541 Ppx/GppA phosphatase family RD16_RS05375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD16_RS05375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD16_RS05375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD16_RS05375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD16_RS05380 PF00809 Pterin binding enzyme RD16_RS05385 PF00004 ATPase family associated with various cellular activities (AAA) RD16_RS05385 PF17862 AAA+ lid domain RD16_RS05385 PF06480 FtsH Extracellular RD16_RS05385 PF01434 Peptidase family M41 RD16_RS05390 PF01728 FtsJ-like methyltransferase RD16_RS05395 PF01985 CRS1 / YhbY (CRM) domain RD16_RS05420 PF01636 Phosphotransferase enzyme family RD16_RS05425 PF01207 Dihydrouridine synthase (Dus) RD16_RS05440 PF03631 Virulence factor BrkB RD16_RS05450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RD16_RS05455 PF00486 Transcriptional regulatory protein, C terminal RD16_RS05455 PF00072 Response regulator receiver domain RD16_RS05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS05460 PF07689 KaiB domain RD16_RS05460 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS05470 PF00005 ABC transporter RD16_RS05470 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS05490 PF00005 ABC transporter RD16_RS05495 PF00501 AMP-binding enzyme RD16_RS05500 PF00440 Bacterial regulatory proteins, tetR family RD16_RS05500 PF17932 Tetracyclin repressor-like, C-terminal domain RD16_RS05510 PF00152 tRNA synthetases class II (D, K and N) RD16_RS05510 PF01336 OB-fold nucleic acid binding domain RD16_RS05515 PF00106 short chain dehydrogenase RD16_RS05520 PF03462 PCRF domain RD16_RS05520 PF00472 RF-1 domain RD16_RS05525 PF02272 DHHA1 domain RD16_RS05525 PF17768 RecJ OB domain RD16_RS05525 PF01368 DHH family RD16_RS05535 PF02687 FtsX-like permease family RD16_RS05535 PF12704 MacB-like periplasmic core domain RD16_RS05540 PF00005 ABC transporter RD16_RS05545 PF01026 TatD related DNase RD16_RS05580 PF02811 PHP domain RD16_RS05585 PF03449 Transcription elongation factor, N-terminal RD16_RS05585 PF01272 Transcription elongation factor, GreA/GreB, C-term RD16_RS05595 PF16970 Type-1 fimbrial protein, A RD16_RS05600 PF01515 Phosphate acetyl/butaryl transferase RD16_RS05600 PF03949 Malic enzyme, NAD binding domain RD16_RS05600 PF00390 Malic enzyme, N-terminal domain RD16_RS05605 PF00456 Transketolase, thiamine diphosphate binding domain RD16_RS05605 PF17831 Pyruvate dehydrogenase E1 component middle domain RD16_RS05610 PF01037 Lrp/AsnC ligand binding domain RD16_RS05615 PF03169 OPT oligopeptide transporter protein RD16_RS05620 PF02779 Transketolase, pyrimidine binding domain RD16_RS05620 PF16078 2-oxoglutarate dehydrogenase N-terminus RD16_RS05620 PF16870 2-oxoglutarate dehydrogenase C-terminal RD16_RS05620 PF00676 Dehydrogenase E1 component RD16_RS05625 PF02817 e3 binding domain RD16_RS05625 PF00364 Biotin-requiring enzyme RD16_RS05625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD16_RS05630 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS05630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD16_RS05635 PF03969 AFG1-like ATPase RD16_RS05645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS05645 PF03466 LysR substrate binding domain RD16_RS05655 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS05680 PF08281 Sigma-70, region 4 RD16_RS05680 PF04542 Sigma-70 region 2 RD16_RS05685 PF04773 FecR protein RD16_RS05685 PF16220 Domain of unknown function (DUF4880) RD16_RS05690 PF07715 TonB-dependent Receptor Plug Domain RD16_RS05690 PF00593 TonB dependent receptor RD16_RS05715 PF00579 tRNA synthetases class I (W and Y) RD16_RS05720 PF16921 Tex protein YqgF-like domain RD16_RS05720 PF17674 HHH domain RD16_RS05720 PF00575 S1 RNA binding domain RD16_RS05720 PF09371 Tex-like protein N-terminal domain RD16_RS05725 PF13307 Helicase C-terminal domain RD16_RS05725 PF04851 Type III restriction enzyme, res subunit RD16_RS05730 PF13525 Outer membrane lipoprotein RD16_RS05735 PF01479 S4 domain RD16_RS05735 PF00849 RNA pseudouridylate synthase RD16_RS05740 PF02578 Multi-copper polyphenol oxidoreductase laccase RD16_RS05745 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RD16_RS05750 PF00106 short chain dehydrogenase RD16_RS05755 PF05233 PHB accumulation regulatory domain RD16_RS05755 PF07879 PHB/PHA accumulation regulator DNA-binding domain RD16_RS05760 PF10634 Fe2+ transport protein RD16_RS05770 PF03239 Iron permease FTR1 family RD16_RS05780 PF02567 Phenazine biosynthesis-like protein RD16_RS05800 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS05805 PF13378 Enolase C-terminal domain-like RD16_RS05805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD16_RS05810 PF03466 LysR substrate binding domain RD16_RS05810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS05820 PF07690 Major Facilitator Superfamily RD16_RS05835 PF02016 LD-carboxypeptidase N-terminal domain RD16_RS05835 PF17676 LD-carboxypeptidase C-terminal domain RD16_RS05845 PF03466 LysR substrate binding domain RD16_RS05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS05850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD16_RS05850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD16_RS05855 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS05880 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD16_RS05900 PF00005 ABC transporter RD16_RS05905 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS05910 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS05915 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS05920 PF00155 Aminotransferase class I and II RD16_RS05950 PF02627 Carboxymuconolactone decarboxylase family RD16_RS05955 PF04542 Sigma-70 region 2 RD16_RS05955 PF12680 SnoaL-like domain RD16_RS05955 PF08281 Sigma-70, region 4 RD16_RS05965 PF12843 Putative quorum-sensing-regulated virulence factor RD16_RS05970 PF00293 NUDIX domain RD16_RS05985 PF13545 Crp-like helix-turn-helix domain RD16_RS05985 PF00027 Cyclic nucleotide-binding domain RD16_RS05990 PF10431 C-terminal, D2-small domain, of ClpB protein RD16_RS05990 PF02861 Clp amino terminal domain, pathogenicity island component RD16_RS05990 PF17871 AAA lid domain RD16_RS05990 PF07724 AAA domain (Cdc48 subfamily) RD16_RS05990 PF00004 ATPase family associated with various cellular activities (AAA) RD16_RS06000 PF03212 Pertactin RD16_RS06000 PF03797 Autotransporter beta-domain RD16_RS06005 PF03212 Pertactin RD16_RS06005 PF03797 Autotransporter beta-domain RD16_RS06020 PF09370 Phosphoenolpyruvate hydrolase-like RD16_RS06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS06030 PF03466 LysR substrate binding domain RD16_RS06035 PF07969 Amidohydrolase family RD16_RS06045 PF00258 Flavodoxin RD16_RS06045 PF00175 Oxidoreductase NAD-binding domain RD16_RS06045 PF00667 FAD binding domain RD16_RS06050 PF02424 ApbE family RD16_RS06070 PF00005 ABC transporter RD16_RS06075 PF01061 ABC-2 type transporter RD16_RS06085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RD16_RS06090 PF01593 Flavin containing amine oxidoreductase RD16_RS06090 PF01593 Flavin containing amine oxidoreductase RD16_RS06105 PF01168 Alanine racemase, N-terminal domain RD16_RS06105 PF00842 Alanine racemase, C-terminal domain RD16_RS06125 PF04545 Sigma-70, region 4 RD16_RS06125 PF04542 Sigma-70 region 2 RD16_RS06130 PF12450 von Willebrand factor RD16_RS06130 PF00092 von Willebrand factor type A domain RD16_RS06130 PF12034 Domain of unknown function (DUF3520) RD16_RS06135 PF18073 Rubredoxin metal binding domain RD16_RS06150 PF01554 MatE RD16_RS06160 PF01197 Ribosomal protein L31 RD16_RS06165 PF03301 Tryptophan 2,3-dioxygenase RD16_RS06170 PF04199 Putative cyclase RD16_RS06175 PF04002 RadC-like JAB domain RD16_RS06180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD16_RS06185 PF02401 LytB protein RD16_RS06190 PF14497 Glutathione S-transferase, C-terminal domain RD16_RS06190 PF02798 Glutathione S-transferase, N-terminal domain RD16_RS06210 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD16_RS06210 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD16_RS06215 PF00881 Nitroreductase family RD16_RS06220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS06220 PF03466 LysR substrate binding domain RD16_RS06230 PF04079 Segregation and condensation complex subunit ScpB RD16_RS06235 PF01479 S4 domain RD16_RS06235 PF00849 RNA pseudouridylate synthase RD16_RS06240 PF17384 RimP C-terminal SH3 domain RD16_RS06240 PF02576 RimP N-terminal domain RD16_RS06245 PF08529 NusA N-terminal domain RD16_RS06245 PF13184 NusA-like KH domain RD16_RS06250 PF00009 Elongation factor Tu GTP binding domain RD16_RS06250 PF11987 Translation-initiation factor 2 RD16_RS06250 PF08364 Bacterial translation initiation factor IF-2 associated region RD16_RS06250 PF04760 Translation initiation factor IF-2, N-terminal region RD16_RS06255 PF02033 Ribosome-binding factor A RD16_RS06260 PF01509 TruB family pseudouridylate synthase (N terminal domain) RD16_RS06260 PF16198 tRNA pseudouridylate synthase B C-terminal domain RD16_RS06265 PF00009 Elongation factor Tu GTP binding domain RD16_RS06265 PF00679 Elongation factor G C-terminus RD16_RS06265 PF03144 Elongation factor Tu domain 2 RD16_RS06280 PF03641 Possible lysine decarboxylase RD16_RS06285 PF01612 3'-5' exonuclease RD16_RS06285 PF00476 DNA polymerase family A RD16_RS06285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RD16_RS06285 PF01367 5'-3' exonuclease, C-terminal SAM fold RD16_RS06295 PF01738 Dienelactone hydrolase family RD16_RS06300 PF02690 Na+/Pi-cotransporter RD16_RS06305 PF03315 Serine dehydratase beta chain RD16_RS06305 PF03313 Serine dehydratase alpha chain RD16_RS06310 PF02677 Epoxyqueuosine reductase QueH RD16_RS06315 PF03710 Glutamate-ammonia ligase adenylyltransferase RD16_RS06315 PF08335 GlnD PII-uridylyltransferase RD16_RS06325 PF07497 Rho termination factor, RNA-binding domain RD16_RS06325 PF07498 Rho termination factor, N-terminal domain RD16_RS06325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD16_RS06330 PF00085 Thioredoxin RD16_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS06335 PF01751 Toprim domain RD16_RS06335 PF00986 DNA gyrase B subunit, carboxyl terminus RD16_RS06335 PF00204 DNA gyrase B RD16_RS06345 PF00521 DNA gyrase/topoisomerase IV, subunit A RD16_RS06350 PF04235 Protein of unknown function (DUF418) RD16_RS06360 PF00892 EamA-like transporter family RD16_RS06375 PF01177 Asp/Glu/Hydantoin racemase RD16_RS06380 PF00005 ABC transporter RD16_RS06385 PF00005 ABC transporter RD16_RS06385 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS06390 PF11862 Domain of unknown function (DUF3382) RD16_RS06390 PF02653 Branched-chain amino acid transport system / permease component RD16_RS06395 PF02653 Branched-chain amino acid transport system / permease component RD16_RS06400 PF13458 Periplasmic binding protein RD16_RS06410 PF02592 Putative vitamin uptake transporter RD16_RS06415 PF14748 Pyrroline-5-carboxylate reductase dimerisation RD16_RS06415 PF03807 NADP oxidoreductase coenzyme F420-dependent RD16_RS06420 PF13416 Bacterial extracellular solute-binding protein RD16_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS06435 PF00005 ABC transporter RD16_RS06435 PF17912 MalK OB fold domain RD16_RS06440 PF13458 Periplasmic binding protein RD16_RS06470 PF04241 Protein of unknown function (DUF423) RD16_RS06480 PF08808 RES domain RD16_RS06485 PF03180 NLPA lipoprotein RD16_RS06490 PF01070 FMN-dependent dehydrogenase RD16_RS06495 PF02666 Phosphatidylserine decarboxylase RD16_RS06510 PF10437 Bacterial lipoate protein ligase C-terminus RD16_RS06510 PF03099 Biotin/lipoate A/B protein ligase family RD16_RS06525 PF00043 Glutathione S-transferase, C-terminal domain RD16_RS06525 PF02798 Glutathione S-transferase, N-terminal domain RD16_RS06530 PF00255 Glutathione peroxidase RD16_RS06550 PF02515 CoA-transferase family III RD16_RS06555 PF03960 ArsC family RD16_RS06560 PF00578 AhpC/TSA family RD16_RS06580 PF07681 DoxX RD16_RS06585 PF16485 Protealysin propeptide RD16_RS06585 PF02868 Thermolysin metallopeptidase, alpha-helical domain RD16_RS06585 PF01447 Thermolysin metallopeptidase, catalytic domain RD16_RS06595 PF00248 Aldo/keto reductase family RD16_RS06600 PF00582 Universal stress protein family RD16_RS06615 PF00392 Bacterial regulatory proteins, gntR family RD16_RS06615 PF00155 Aminotransferase class I and II RD16_RS06620 PF01168 Alanine racemase, N-terminal domain RD16_RS06625 PF08543 Phosphomethylpyrimidine kinase RD16_RS06635 PF00128 Alpha amylase, catalytic domain RD16_RS06640 PF02446 4-alpha-glucanotransferase RD16_RS06650 PF00128 Alpha amylase, catalytic domain RD16_RS06650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD16_RS06650 PF11941 Domain of unknown function (DUF3459) RD16_RS06655 PF00128 Alpha amylase, catalytic domain RD16_RS06655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD16_RS06660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD16_RS06660 PF02806 Alpha amylase, C-terminal all-beta domain RD16_RS06660 PF00128 Alpha amylase, catalytic domain RD16_RS06665 PF16657 Maltogenic Amylase, C-terminal domain RD16_RS06665 PF00128 Alpha amylase, catalytic domain RD16_RS06670 PF11896 Domain of unknown function (DUF3416) RD16_RS06670 PF00128 Alpha amylase, catalytic domain RD16_RS06700 PF03706 Lysylphosphatidylglycerol synthase TM region RD16_RS06715 PF13091 PLD-like domain RD16_RS06720 PF03372 Endonuclease/Exonuclease/phosphatase family RD16_RS06725 PF03551 Transcriptional regulator PadR-like family RD16_RS06735 PF12951 Passenger-associated-transport-repeat RD16_RS06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS06745 PF03466 LysR substrate binding domain RD16_RS06755 PF03328 HpcH/HpaI aldolase/citrate lyase family RD16_RS06760 PF00392 Bacterial regulatory proteins, gntR family RD16_RS06760 PF07729 FCD domain RD16_RS06765 PF13380 CoA binding domain RD16_RS06765 PF13607 Succinyl-CoA ligase like flavodoxin domain RD16_RS06770 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS06780 PF02515 CoA-transferase family III RD16_RS06785 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS06790 PF00356 Bacterial regulatory proteins, lacI family RD16_RS06795 PF00694 Aconitase C-terminal domain RD16_RS06805 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS06810 PF13378 Enolase C-terminal domain-like RD16_RS06815 PF08546 Ketopantoate reductase PanE/ApbA C terminal RD16_RS06815 PF02558 Ketopantoate reductase PanE/ApbA RD16_RS06825 PF00005 ABC transporter RD16_RS06830 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS06835 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS06845 PF01312 FlhB HrpN YscU SpaS Family RD16_RS06855 PF00448 SRP54-type protein, GTPase domain RD16_RS06865 PF04316 Anti-sigma-28 factor, FlgM RD16_RS06875 PF00460 Flagella basal body rod protein RD16_RS06880 PF00460 Flagella basal body rod protein RD16_RS06880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD16_RS06885 PF13861 FlgD Tudor-like domain RD16_RS06885 PF03963 Flagellar hook capping protein - N-terminal region RD16_RS06885 PF13860 FlgD Ig-like domain RD16_RS06890 PF07559 Flagellar basal body protein FlaE RD16_RS06890 PF00460 Flagella basal body rod protein RD16_RS06890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD16_RS06895 PF00460 Flagella basal body rod protein RD16_RS06895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD16_RS06900 PF00460 Flagella basal body rod protein RD16_RS06900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD16_RS06905 PF02107 Flagellar L-ring protein RD16_RS06910 PF02119 Flagellar P-ring protein RD16_RS06915 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RD16_RS06915 PF10135 Rod binding protein RD16_RS06920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD16_RS06920 PF00460 Flagella basal body rod protein RD16_RS06925 PF00669 Bacterial flagellin N-terminal helical region RD16_RS06930 PF02203 Tar ligand binding domain homologue RD16_RS06930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD16_RS06930 PF00672 HAMP domain RD16_RS06935 PF02203 Tar ligand binding domain homologue RD16_RS06935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD16_RS06935 PF00672 HAMP domain RD16_RS06940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD16_RS06940 PF08447 PAS fold RD16_RS06950 PF01311 Bacterial export proteins, family 1 RD16_RS06955 PF01313 Bacterial export proteins, family 3 RD16_RS06960 PF00813 FliP family RD16_RS06965 PF04347 Flagellar biosynthesis protein, FliO RD16_RS06970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD16_RS06970 PF16973 Flagellar motor switch protein FliN N-terminal RD16_RS06975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD16_RS06975 PF02154 Flagellar motor switch protein FliM RD16_RS06980 PF03748 Flagellar basal body-associated protein FliL RD16_RS07005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD16_RS07005 PF18269 T3SS EscN ATPase C-terminal domain RD16_RS07015 PF14842 FliG N-terminal domain RD16_RS07015 PF14841 FliG middle domain RD16_RS07015 PF01706 FliG C-terminal domain RD16_RS07020 PF01514 Secretory protein of YscJ/FliF family RD16_RS07020 PF08345 Flagellar M-ring protein C-terminal RD16_RS07025 PF02049 Flagellar hook-basal body complex protein FliE RD16_RS07035 PF01312 FlhB HrpN YscU SpaS Family RD16_RS07055 PF02561 Flagellar protein FliS RD16_RS07060 PF02465 Flagellar hook-associated protein 2 N-terminus RD16_RS07060 PF07196 Flagellin hook IN motif RD16_RS07060 PF07195 Flagellar hook-associated protein 2 C-terminus RD16_RS07070 PF02875 Mur ligase family, glutamate ligase domain RD16_RS07070 PF08245 Mur ligase middle domain RD16_RS07085 PF00156 Phosphoribosyl transferase domain RD16_RS07100 PF01909 Nucleotidyltransferase domain RD16_RS07100 PF01966 HD domain RD16_RS07100 PF08335 GlnD PII-uridylyltransferase RD16_RS07105 PF00557 Metallopeptidase family M24 RD16_RS07110 PF00318 Ribosomal protein S2 RD16_RS07115 PF00889 Elongation factor TS RD16_RS07120 PF00696 Amino acid kinase family RD16_RS07125 PF01765 Ribosome recycling factor RD16_RS07130 PF01255 Putative undecaprenyl diphosphate synthase RD16_RS07140 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD16_RS07140 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RD16_RS07140 PF13288 DXP reductoisomerase C-terminal domain RD16_RS07145 PF17820 PDZ domain RD16_RS07145 PF02163 Peptidase family M50 RD16_RS07150 PF07244 Surface antigen variable number repeat RD16_RS07150 PF01103 Surface antigen RD16_RS07155 PF03938 Outer membrane protein (OmpH-like) RD16_RS07160 PF00132 Bacterial transferase hexapeptide (six repeats) RD16_RS07160 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RD16_RS07165 PF07977 FabA-like domain RD16_RS07170 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RD16_RS07170 PF00132 Bacterial transferase hexapeptide (six repeats) RD16_RS07175 PF02684 Lipid-A-disaccharide synthetase RD16_RS07180 PF01351 Ribonuclease HII RD16_RS07185 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD16_RS07185 PF00588 SpoU rRNA Methylase family RD16_RS07190 PF03618 Kinase/pyrophosphorylase RD16_RS07195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RD16_RS07195 PF00391 PEP-utilising enzyme, mobile domain RD16_RS07195 PF02896 PEP-utilising enzyme, TIM barrel domain RD16_RS07200 PF00117 Glutamine amidotransferase class-I RD16_RS07200 PF00958 GMP synthase C terminal domain RD16_RS07215 PF01145 SPFH domain / Band 7 family RD16_RS07215 PF16200 C-terminal region of band_7 RD16_RS07220 PF00990 Diguanylate cyclase, GGDEF domain RD16_RS07220 PF08448 PAS fold RD16_RS07225 PF01668 SmpB protein RD16_RS07230 PF03364 Polyketide cyclase / dehydrase and lipid transport RD16_RS07235 PF03658 RnfH family Ubiquitin RD16_RS07240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS07240 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS07240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS07245 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS07250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD16_RS07250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD16_RS07275 PF00923 Transaldolase/Fructose-6-phosphate aldolase RD16_RS07280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RD16_RS07280 PF00117 Glutamine amidotransferase class-I RD16_RS07285 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD16_RS07285 PF02142 MGS-like domain RD16_RS07285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD16_RS07295 PF00300 Histidine phosphatase superfamily (branch 1) RD16_RS07300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS07300 PF03466 LysR substrate binding domain RD16_RS07305 PF00005 ABC transporter RD16_RS07305 PF08402 TOBE domain RD16_RS07310 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS07325 PF08447 PAS fold RD16_RS07325 PF00563 EAL domain RD16_RS07325 PF00990 Diguanylate cyclase, GGDEF domain RD16_RS07325 PF08448 PAS fold RD16_RS07330 PF01264 Chorismate synthase RD16_RS07335 PF01435 Peptidase family M48 RD16_RS07340 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RD16_RS07345 PF03453 MoeA N-terminal region (domain I and II) RD16_RS07345 PF03454 MoeA C-terminal region (domain IV) RD16_RS07345 PF00994 Probable molybdopterin binding domain RD16_RS07350 PF12804 MobA-like NTP transferase domain RD16_RS07355 PF10609 NUBPL iron-transfer P-loop NTPase RD16_RS07385 PF00384 Molybdopterin oxidoreductase RD16_RS07385 PF01568 Molydopterin dinucleotide binding domain RD16_RS07385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD16_RS07390 PF13247 4Fe-4S dicluster domain RD16_RS07415 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS07420 PF00005 ABC transporter RD16_RS07425 PF12849 PBP superfamily domain RD16_RS07430 PF00330 Aconitase family (aconitate hydratase) RD16_RS07435 PF00694 Aconitase C-terminal domain RD16_RS07440 PF00180 Isocitrate/isopropylmalate dehydrogenase RD16_RS07445 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD16_RS07445 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD16_RS07455 PF01416 tRNA pseudouridine synthase RD16_RS07460 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS07470 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS07475 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RD16_RS07490 PF00990 Diguanylate cyclase, GGDEF domain RD16_RS07500 PF06969 HemN C-terminal domain RD16_RS07500 PF04055 Radical SAM superfamily RD16_RS07510 PF00196 Bacterial regulatory proteins, luxR family RD16_RS07515 PF02824 TGS domain RD16_RS07515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD16_RS07515 PF03129 Anticodon binding domain RD16_RS07515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD16_RS07520 PF00707 Translation initiation factor IF-3, C-terminal domain RD16_RS07520 PF05198 Translation initiation factor IF-3, N-terminal domain RD16_RS07525 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RD16_RS07525 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RD16_RS07535 PF00381 PTS HPr component phosphorylation site RD16_RS07540 PF05524 PEP-utilising enzyme, N-terminal RD16_RS07540 PF00391 PEP-utilising enzyme, mobile domain RD16_RS07540 PF02896 PEP-utilising enzyme, TIM barrel domain RD16_RS07550 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD16_RS07560 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS07565 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS07570 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS07575 PF00005 ABC transporter RD16_RS07590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD16_RS07590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD16_RS07600 PF02293 AmiS/UreI family transporter RD16_RS07605 PF03069 Acetamidase/Formamidase family RD16_RS07620 PF01116 Fructose-bisphosphate aldolase class-II RD16_RS07630 PF01259 SAICAR synthetase RD16_RS07635 PF15723 Motility quorum-sensing regulator, toxin of MqsA RD16_RS07640 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA RD16_RS07645 PF02600 Disulfide bond formation protein DsbB RD16_RS07650 PF00731 AIR carboxylase RD16_RS07655 PF02222 ATP-grasp domain RD16_RS07655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RD16_RS07660 PF01300 Telomere recombination RD16_RS07660 PF03481 Putative GTP-binding controlling metal-binding RD16_RS07665 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS07670 PF01614 Bacterial transcriptional regulator RD16_RS07670 PF09339 IclR helix-turn-helix domain RD16_RS07675 PF00491 Arginase family RD16_RS07680 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS07685 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS07690 PF00005 ABC transporter RD16_RS07695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS07695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS07705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS07705 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS07705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS07710 PF00205 Thiamine pyrophosphate enzyme, central domain RD16_RS07710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS07710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS07715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS07715 PF03466 LysR substrate binding domain RD16_RS07720 PF00589 Phage integrase family RD16_RS07720 PF02899 Phage integrase, N-terminal SAM-like domain RD16_RS07725 PF04073 Aminoacyl-tRNA editing domain RD16_RS07730 PF01174 SNO glutamine amidotransferase family RD16_RS07745 PF00768 D-alanyl-D-alanine carboxypeptidase RD16_RS07755 PF07690 Major Facilitator Superfamily RD16_RS07765 PF12705 PD-(D/E)XK nuclease superfamily RD16_RS07765 PF00580 UvrD/REP helicase N-terminal domain RD16_RS07765 PF13361 UvrD-like helicase C-terminal domain RD16_RS07775 PF12169 DNA polymerase III subunits gamma and tau domain III RD16_RS07775 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RD16_RS07775 PF12170 DNA polymerase III tau subunit V interacting with alpha RD16_RS07780 PF02575 YbaB/EbfC DNA-binding family RD16_RS07785 PF02132 RecR protein RD16_RS07785 PF13662 Toprim domain RD16_RS07805 PF04228 Putative neutral zinc metallopeptidase RD16_RS07810 PF01300 Telomere recombination RD16_RS07845 PF03358 NADPH-dependent FMN reductase RD16_RS07850 PF07311 Dodecin RD16_RS07855 PF01624 MutS domain I RD16_RS07855 PF05188 MutS domain II RD16_RS07855 PF05192 MutS domain III RD16_RS07855 PF05190 MutS family domain IV RD16_RS07855 PF00488 MutS domain V RD16_RS07860 PF08007 Cupin superfamily protein RD16_RS07865 PF16970 Type-1 fimbrial protein, A RD16_RS07870 PF06804 NlpB/DapX lipoprotein RD16_RS07875 PF00701 Dihydrodipicolinate synthetase family RD16_RS07880 PF02163 Peptidase family M50 RD16_RS07890 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS07895 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS07900 PF00005 ABC transporter RD16_RS07905 PF02824 TGS domain RD16_RS07905 PF04607 Region found in RelA / SpoT proteins RD16_RS07905 PF13291 ACT domain RD16_RS07910 PF01192 RNA polymerase Rpb6 RD16_RS07915 PF00625 Guanylate kinase RD16_RS07920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD16_RS07925 PF00034 Cytochrome c RD16_RS07935 PF00877 NlpC/P60 family RD16_RS07940 PF01048 Phosphorylase superfamily RD16_RS07940 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RD16_RS07960 PF08340 Domain of unknown function (DUF1732) RD16_RS07960 PF03755 YicC-like family, N-terminal region RD16_RS07965 PF01138 3' exoribonuclease family, domain 1 RD16_RS07965 PF03725 3' exoribonuclease family, domain 2 RD16_RS07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS07975 PF03466 LysR substrate binding domain RD16_RS07980 PF00990 Diguanylate cyclase, GGDEF domain RD16_RS07980 PF17154 Gammaproteobacterial periplasmic sensor domain RD16_RS07980 PF00672 HAMP domain RD16_RS07980 PF00563 EAL domain RD16_RS07985 PF01725 Ham1 family RD16_RS07995 PF04055 Radical SAM superfamily RD16_RS07995 PF06969 HemN C-terminal domain RD16_RS08000 PF03951 Glutamine synthetase, beta-Grasp domain RD16_RS08000 PF00120 Glutamine synthetase, catalytic domain RD16_RS08005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS08005 PF00989 PAS fold RD16_RS08005 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS08010 PF00158 Sigma-54 interaction domain RD16_RS08010 PF00072 Response regulator receiver domain RD16_RS08010 PF02954 Bacterial regulatory protein, Fis family RD16_RS08015 PF03466 LysR substrate binding domain RD16_RS08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS08020 PF02678 Pirin RD16_RS08020 PF17954 Quercetinase C-terminal cupin domain RD16_RS08025 PF05726 Pirin C-terminal cupin domain RD16_RS08025 PF02678 Pirin RD16_RS08035 PF08402 TOBE domain RD16_RS08035 PF00005 ABC transporter RD16_RS08040 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS08050 PF00970 Oxidoreductase FAD-binding domain RD16_RS08050 PF00175 Oxidoreductase NAD-binding domain RD16_RS08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS08055 PF03466 LysR substrate binding domain RD16_RS08065 PF00248 Aldo/keto reductase family RD16_RS08075 PF01042 Endoribonuclease L-PSP RD16_RS08080 PF00270 DEAD/DEAH box helicase RD16_RS08080 PF17191 RecG wedge domain RD16_RS08080 PF00271 Helicase conserved C-terminal domain RD16_RS08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS08085 PF03466 LysR substrate binding domain RD16_RS08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS08090 PF03466 LysR substrate binding domain RD16_RS08095 PF00171 Aldehyde dehydrogenase family RD16_RS08100 PF00210 Ferritin-like domain RD16_RS08125 PF00005 ABC transporter RD16_RS08135 PF00534 Glycosyl transferases group 1 RD16_RS08145 PF02563 Polysaccharide biosynthesis/export protein RD16_RS08150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD16_RS08150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD16_RS08150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD16_RS08155 PF01370 NAD dependent epimerase/dehydratase family RD16_RS08160 PF05159 Capsule polysaccharide biosynthesis protein RD16_RS08165 PF05159 Capsule polysaccharide biosynthesis protein RD16_RS08180 PF00884 Sulfatase RD16_RS08210 PF17863 AAA lid domain RD16_RS08210 PF07726 ATPase family associated with various cellular activities (AAA) RD16_RS08225 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS08235 PF03741 Integral membrane protein TerC family RD16_RS08245 PF02653 Branched-chain amino acid transport system / permease component RD16_RS08245 PF11862 Domain of unknown function (DUF3382) RD16_RS08250 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS08250 PF00005 ABC transporter RD16_RS08255 PF00005 ABC transporter RD16_RS08265 PF14759 Reductase C-terminal RD16_RS08265 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS08280 PF00106 short chain dehydrogenase RD16_RS08300 PF00196 Bacterial regulatory proteins, luxR family RD16_RS08300 PF00072 Response regulator receiver domain RD16_RS08305 PF12951 Passenger-associated-transport-repeat RD16_RS08305 PF03797 Autotransporter beta-domain RD16_RS08305 PF00082 Subtilase family RD16_RS08310 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA RD16_RS08315 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system RD16_RS08320 PF02798 Glutathione S-transferase, N-terminal domain RD16_RS08320 PF00043 Glutathione S-transferase, C-terminal domain RD16_RS08325 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD16_RS08335 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS08345 PF01070 FMN-dependent dehydrogenase RD16_RS08350 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD16_RS08365 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS08370 PF03466 LysR substrate binding domain RD16_RS08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS08375 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS08400 PF03358 NADPH-dependent FMN reductase RD16_RS08425 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS08435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS08435 PF03466 LysR substrate binding domain RD16_RS08450 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS08455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD16_RS08455 PF13244 Domain of unknown function (DUF4040) RD16_RS08455 PF00361 Proton-conducting membrane transporter RD16_RS08455 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RD16_RS08460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD16_RS08465 PF00361 Proton-conducting membrane transporter RD16_RS08470 PF01899 Na+/H+ ion antiporter subunit RD16_RS08475 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RD16_RS08500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD16_RS08505 PF02016 LD-carboxypeptidase N-terminal domain RD16_RS08505 PF17676 LD-carboxypeptidase C-terminal domain RD16_RS08510 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS08515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS08525 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS08530 PF12848 ABC transporter RD16_RS08530 PF00005 ABC transporter RD16_RS08535 PF00005 ABC transporter RD16_RS08560 PF01205 Uncharacterized protein family UPF0029 RD16_RS08565 PF00085 Thioredoxin RD16_RS08575 PF00860 Permease family RD16_RS08580 PF00814 Glycoprotease family RD16_RS08590 PF02660 Glycerol-3-phosphate acyltransferase RD16_RS08595 PF01975 Survival protein SurE RD16_RS08605 PF01551 Peptidase family M23 RD16_RS08605 PF01476 LysM domain RD16_RS08625 PF05958 tRNA (Uracil-5-)-methyltransferase RD16_RS08630 PF00376 MerR family regulatory protein RD16_RS08630 PF09278 MerR, DNA binding RD16_RS08640 PF08534 Redoxin RD16_RS08640 PF00462 Glutaredoxin RD16_RS08645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD16_RS08645 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS08650 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RD16_RS08655 PF03009 Glycerophosphoryl diester phosphodiesterase family RD16_RS08660 PF13145 PPIC-type PPIASE domain RD16_RS08665 PF13472 GDSL-like Lipase/Acylhydrolase family RD16_RS08670 PF00005 ABC transporter RD16_RS08680 PF04972 BON domain RD16_RS08690 PF05532 CsbD-like RD16_RS08695 PF02875 Mur ligase family, glutamate ligase domain RD16_RS08695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD16_RS08695 PF08245 Mur ligase middle domain RD16_RS08700 PF02875 Mur ligase family, glutamate ligase domain RD16_RS08700 PF08245 Mur ligase middle domain RD16_RS08700 PF08443 RimK-like ATP-grasp domain RD16_RS08720 PF04305 Protein of unknown function (DUF455) RD16_RS08725 PF13406 Transglycosylase SLT domain RD16_RS08740 PF01037 Lrp/AsnC ligand binding domain RD16_RS08750 PF04127 DNA / pantothenate metabolism flavoprotein RD16_RS08750 PF02441 Flavoprotein RD16_RS08755 PF01252 Signal peptidase (SPase) II RD16_RS08760 PF00133 tRNA synthetases class I (I, L, M and V) RD16_RS08760 PF06827 Zinc finger found in FPG and IleRS RD16_RS08760 PF08264 Anticodon-binding domain of tRNA RD16_RS08765 PF06574 FAD synthetase RD16_RS08765 PF01687 Riboflavin kinase RD16_RS08770 PF01029 NusB family RD16_RS08770 PF01189 16S rRNA methyltransferase RsmB/F RD16_RS08795 PF00580 UvrD/REP helicase N-terminal domain RD16_RS08795 PF13361 UvrD-like helicase C-terminal domain RD16_RS08800 PF07715 TonB-dependent Receptor Plug Domain RD16_RS08805 PF12848 ABC transporter RD16_RS08805 PF00005 ABC transporter RD16_RS08810 PF05175 Methyltransferase small domain RD16_RS08815 PF01546 Peptidase family M20/M25/M40 RD16_RS08815 PF07687 Peptidase dimerisation domain RD16_RS08820 PF00132 Bacterial transferase hexapeptide (six repeats) RD16_RS08820 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RD16_RS08820 PF14602 Hexapeptide repeat of succinyl-transferase RD16_RS08855 PF00313 'Cold-shock' DNA-binding domain RD16_RS08865 PF00313 'Cold-shock' DNA-binding domain RD16_RS08870 PF03350 Uncharacterized protein family, UPF0114 RD16_RS08875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD16_RS08875 PF05697 Bacterial trigger factor protein (TF) RD16_RS08875 PF05698 Bacterial trigger factor protein (TF) C-terminus RD16_RS08880 PF00574 Clp protease RD16_RS08885 PF06689 ClpX C4-type zinc finger RD16_RS08885 PF10431 C-terminal, D2-small domain, of ClpB protein RD16_RS08885 PF07724 AAA domain (Cdc48 subfamily) RD16_RS08890 PF02190 ATP-dependent protease La (LON) substrate-binding domain RD16_RS08890 PF00004 ATPase family associated with various cellular activities (AAA) RD16_RS08890 PF05362 Lon protease (S16) C-terminal proteolytic domain RD16_RS08895 PF03466 LysR substrate binding domain RD16_RS08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS08900 PF02515 CoA-transferase family III RD16_RS08905 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS08910 PF01575 MaoC like domain RD16_RS08915 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS08925 PF00108 Thiolase, N-terminal domain RD16_RS08925 PF02803 Thiolase, C-terminal domain RD16_RS08935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS08935 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS08935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS08945 PF01144 Coenzyme A transferase RD16_RS08950 PF01144 Coenzyme A transferase RD16_RS08955 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS08975 PF03212 Pertactin RD16_RS08975 PF03797 Autotransporter beta-domain RD16_RS08980 PF00717 Peptidase S24-like RD16_RS08980 PF01726 LexA DNA binding domain RD16_RS08985 PF00155 Aminotransferase class I and II RD16_RS08990 PF17757 UvrB interaction domain RD16_RS08990 PF12344 Ultra-violet resistance protein B RD16_RS08990 PF02151 UvrB/uvrC motif RD16_RS08990 PF04851 Type III restriction enzyme, res subunit RD16_RS08990 PF00271 Helicase conserved C-terminal domain RD16_RS08995 PF01451 Low molecular weight phosphotyrosine protein phosphatase RD16_RS09000 PF02082 Transcriptional regulator RD16_RS09005 PF00266 Aminotransferase class-V RD16_RS09010 PF01592 NifU-like N terminal domain RD16_RS09015 PF01521 Iron-sulphur cluster biosynthesis RD16_RS09020 PF07743 HSCB C-terminal oligomerisation domain RD16_RS09025 PF00012 Hsp70 protein RD16_RS09030 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS09035 PF04384 Iron-sulphur cluster assembly RD16_RS09040 PF02142 MGS-like domain RD16_RS09050 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS09065 PF03812 2-keto-3-deoxygluconate permease RD16_RS09070 PF07005 Sugar-binding N-terminal domain RD16_RS09070 PF17042 Nucleotide-binding C-terminal domain RD16_RS09075 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD16_RS09090 PF02261 Aspartate decarboxylase RD16_RS09095 PF00175 Oxidoreductase NAD-binding domain RD16_RS09095 PF00970 Oxidoreductase FAD-binding domain RD16_RS09095 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS09100 PF01266 FAD dependent oxidoreductase RD16_RS09105 PF13416 Bacterial extracellular solute-binding protein RD16_RS09110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS09110 PF03466 LysR substrate binding domain RD16_RS09125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS09130 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS09135 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS09140 PF00005 ABC transporter RD16_RS09140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS09145 PF01425 Amidase RD16_RS09190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD16_RS09190 PF01411 tRNA synthetases class II (A) RD16_RS09190 PF02272 DHHA1 domain RD16_RS09195 PF01206 Sulfurtransferase TusA RD16_RS09205 PF00886 Ribosomal protein S16 RD16_RS09210 PF01782 RimM N-terminal domain RD16_RS09215 PF01746 tRNA (Guanine-1)-methyltransferase RD16_RS09220 PF00266 Aminotransferase class-V RD16_RS09240 PF01571 Aminomethyltransferase folate-binding domain RD16_RS09245 PF02618 YceG-like family RD16_RS09250 PF02223 Thymidylate kinase RD16_RS09255 PF12169 DNA polymerase III subunits gamma and tau domain III RD16_RS09260 PF01026 TatD related DNase RD16_RS09275 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS09285 PF00005 ABC transporter RD16_RS09290 PF00491 Arginase family RD16_RS09295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD16_RS09295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD16_RS09300 PF00171 Aldehyde dehydrogenase family RD16_RS09305 PF07687 Peptidase dimerisation domain RD16_RS09305 PF01546 Peptidase family M20/M25/M40 RD16_RS09310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS09310 PF00205 Thiamine pyrophosphate enzyme, central domain RD16_RS09310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS09320 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD16_RS09320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS09330 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD16_RS09330 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS09335 PF00392 Bacterial regulatory proteins, gntR family RD16_RS09335 PF07729 FCD domain RD16_RS09345 PF04343 Protein of unknown function, DUF488 RD16_RS09365 PF01425 Amidase RD16_RS09370 PF07286 Protein of unknown function (DUF1445) RD16_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS09380 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS09380 PF00072 Response regulator receiver domain RD16_RS09380 PF00989 PAS fold RD16_RS09380 PF01627 Hpt domain RD16_RS09380 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS09385 PF00196 Bacterial regulatory proteins, luxR family RD16_RS09385 PF00072 Response regulator receiver domain RD16_RS09390 PF05860 haemagglutination activity domain RD16_RS09390 PF13332 Hemagglutinin repeat RD16_RS09390 PF05594 Haemagluttinin repeat RD16_RS09390 PF13018 Extended Signal Peptide of Type V secretion system RD16_RS09395 PF16970 Type-1 fimbrial protein, A RD16_RS09400 PF02753 Pili assembly chaperone PapD, C-terminal domain RD16_RS09400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RD16_RS09405 PF13953 PapC C-terminal domain RD16_RS09405 PF00577 Outer membrane usher protein RD16_RS09405 PF13954 PapC N-terminal domain RD16_RS09410 PF00419 Fimbrial protein RD16_RS09415 PF17287 POTRA domain RD16_RS09415 PF08479 POTRA domain, ShlB-type RD16_RS09415 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RD16_RS09430 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS09455 PF03466 LysR substrate binding domain RD16_RS09465 PF05378 Hydantoinase/oxoprolinase N-terminal region RD16_RS09465 PF01968 Hydantoinase/oxoprolinase RD16_RS09480 PF05552 Conserved TM helix RD16_RS09480 PF00924 Mechanosensitive ion channel RD16_RS09490 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS09495 PF00588 SpoU rRNA Methylase family RD16_RS09500 PF00459 Inositol monophosphatase family RD16_RS09505 PF03741 Integral membrane protein TerC family RD16_RS09505 PF03471 Transporter associated domain RD16_RS09510 PF02673 Bacitracin resistance protein BacA RD16_RS09515 PF00149 Calcineurin-like phosphoesterase RD16_RS09520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RD16_RS09530 PF01406 tRNA synthetases class I (C) catalytic domain RD16_RS09530 PF09190 DALR domain RD16_RS09535 PF12833 Helix-turn-helix domain RD16_RS09535 PF06029 AlkA N-terminal domain RD16_RS09535 PF00730 HhH-GPD superfamily base excision DNA repair protein RD16_RS09535 PF02805 Metal binding domain of Ada RD16_RS09540 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RD16_RS09550 PF09179 TilS substrate binding domain RD16_RS09550 PF01171 PP-loop family RD16_RS09555 PF01842 ACT domain RD16_RS09555 PF00696 Amino acid kinase family RD16_RS09555 PF13840 ACT domain RD16_RS09580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD16_RS09580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD16_RS09585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS09585 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD16_RS09590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS09595 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS09600 PF00561 alpha/beta hydrolase fold RD16_RS09605 PF03447 Homoserine dehydrogenase, NAD binding domain RD16_RS09605 PF01958 Domain of unknown function DUF108 RD16_RS09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS09620 PF03466 LysR substrate binding domain RD16_RS09640 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS09645 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS09650 PF00005 ABC transporter RD16_RS09650 PF08402 TOBE domain RD16_RS09660 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS09660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD16_RS09665 PF01614 Bacterial transcriptional regulator RD16_RS09665 PF09339 IclR helix-turn-helix domain RD16_RS09670 PF13380 CoA binding domain RD16_RS09675 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS09680 PF01042 Endoribonuclease L-PSP RD16_RS09705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD16_RS09715 PF00535 Glycosyl transferase family 2 RD16_RS09720 PF14883 Hypothetical glycosyl hydrolase family 13 RD16_RS09720 PF01522 Polysaccharide deacetylase RD16_RS09740 PF12802 MarR family RD16_RS09750 PF13458 Periplasmic binding protein RD16_RS09760 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS09760 PF00005 ABC transporter RD16_RS09765 PF00005 ABC transporter RD16_RS09770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD16_RS09770 PF00034 Cytochrome c RD16_RS09770 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD16_RS09775 PF01799 [2Fe-2S] binding domain RD16_RS09775 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS09780 PF01494 FAD binding domain RD16_RS09785 PF17645 Arylmalonate decarboxylase RD16_RS09790 PF00561 alpha/beta hydrolase fold RD16_RS09800 PF00857 Isochorismatase family RD16_RS09815 PF00042 Globin RD16_RS09815 PF00970 Oxidoreductase FAD-binding domain RD16_RS09815 PF00175 Oxidoreductase NAD-binding domain RD16_RS09820 PF07715 TonB-dependent Receptor Plug Domain RD16_RS09820 PF00593 TonB dependent receptor RD16_RS09830 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS09850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD16_RS09850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD16_RS09850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD16_RS09850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD16_RS09855 PF00342 Phosphoglucose isomerase RD16_RS09860 PF00132 Bacterial transferase hexapeptide (six repeats) RD16_RS09870 PF02146 Sir2 family RD16_RS09875 PF00459 Inositol monophosphatase family RD16_RS09880 PF00171 Aldehyde dehydrogenase family RD16_RS09885 PF00202 Aminotransferase class-III RD16_RS09890 PF00392 Bacterial regulatory proteins, gntR family RD16_RS09890 PF00155 Aminotransferase class I and II RD16_RS09900 PF00580 UvrD/REP helicase N-terminal domain RD16_RS09900 PF13361 UvrD-like helicase C-terminal domain RD16_RS09905 PF01544 CorA-like Mg2+ transporter protein RD16_RS09915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS09925 PF12911 N-terminal TM domain of oligopeptide transport permease C RD16_RS09925 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS09930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS09930 PF00005 ABC transporter RD16_RS09935 PF01047 MarR family RD16_RS09945 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RD16_RS09945 PF08479 POTRA domain, ShlB-type RD16_RS09950 PF03707 Bacterial signalling protein N terminal repeat RD16_RS09950 PF00563 EAL domain RD16_RS09950 PF00990 Diguanylate cyclase, GGDEF domain RD16_RS09980 PF04972 BON domain RD16_RS09980 PF00263 Bacterial type II and III secretion system protein RD16_RS09980 PF13629 Pilus formation protein N terminal region RD16_RS09990 PF00437 Type II/IV secretion system protein RD16_RS10020 PF00158 Sigma-54 interaction domain RD16_RS10020 PF02954 Bacterial regulatory protein, Fis family RD16_RS10020 PF00072 Response regulator receiver domain RD16_RS10035 PF04542 Sigma-70 region 2 RD16_RS10035 PF08281 Sigma-70, region 4 RD16_RS10045 PF00034 Cytochrome c RD16_RS10050 PF01132 Elongation factor P (EF-P) OB domain RD16_RS10050 PF08207 Elongation factor P (EF-P) KOW-like domain RD16_RS10050 PF09285 Elongation factor P, C-terminal RD16_RS10065 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RD16_RS10070 PF00694 Aconitase C-terminal domain RD16_RS10070 PF00330 Aconitase family (aconitate hydratase) RD16_RS10080 PF00593 TonB dependent receptor RD16_RS10080 PF07715 TonB-dependent Receptor Plug Domain RD16_RS10095 PF00691 OmpA family RD16_RS10105 PF06434 Aconitate hydratase 2 N-terminus RD16_RS10105 PF00330 Aconitase family (aconitate hydratase) RD16_RS10105 PF11791 Aconitate B N-terminal domain RD16_RS10130 PF00892 EamA-like transporter family RD16_RS10135 PF01925 Sulfite exporter TauE/SafE RD16_RS10150 PF03466 LysR substrate binding domain RD16_RS10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS10155 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RD16_RS10155 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RD16_RS10165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS10165 PF03466 LysR substrate binding domain RD16_RS10210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD16_RS10210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD16_RS10215 PF01425 Amidase RD16_RS10225 PF00171 Aldehyde dehydrogenase family RD16_RS10240 PF09334 tRNA synthetases class I (M) RD16_RS10240 PF08264 Anticodon-binding domain of tRNA RD16_RS10240 PF00133 tRNA synthetases class I (I, L, M and V) RD16_RS10240 PF13603 Leucyl-tRNA synthetase, Domain 2 RD16_RS10245 PF07690 Major Facilitator Superfamily RD16_RS10250 PF01047 MarR family RD16_RS10265 PF00916 Sulfate permease family RD16_RS10265 PF01740 STAS domain RD16_RS10270 PF00471 Ribosomal protein L33 RD16_RS10275 PF00830 Ribosomal L28 family RD16_RS10280 PF07690 Major Facilitator Superfamily RD16_RS10300 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS10305 PF00571 CBS domain RD16_RS10305 PF00005 ABC transporter RD16_RS10310 PF01361 Tautomerase enzyme RD16_RS10315 PF00108 Thiolase, N-terminal domain RD16_RS10315 PF02803 Thiolase, C-terminal domain RD16_RS10325 PF07729 FCD domain RD16_RS10325 PF00392 Bacterial regulatory proteins, gntR family RD16_RS10335 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS10345 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS10350 PF00080 Copper/zinc superoxide dismutase (SODC) RD16_RS10365 PF00005 ABC transporter RD16_RS10370 PF03459 TOBE domain RD16_RS10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS10390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD16_RS10390 PF00529 HlyD membrane-fusion protein of T1SS RD16_RS10395 PF00873 AcrB/AcrD/AcrF family RD16_RS10400 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RD16_RS10400 PF02321 Outer membrane efflux protein RD16_RS10405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RD16_RS10410 PF01648 4'-phosphopantetheinyl transferase superfamily RD16_RS10415 PF00933 Glycosyl hydrolase family 3 N terminal domain RD16_RS10420 PF02151 UvrB/uvrC motif RD16_RS10420 PF08459 UvrC Helix-hairpin-helix N-terminal RD16_RS10420 PF01541 GIY-YIG catalytic domain RD16_RS10425 PF01066 CDP-alcohol phosphatidyltransferase RD16_RS10440 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RD16_RS10440 PF14489 QueF-like protein RD16_RS10445 PF00463 Isocitrate lyase family RD16_RS10460 PF11862 Domain of unknown function (DUF3382) RD16_RS10460 PF02653 Branched-chain amino acid transport system / permease component RD16_RS10465 PF02653 Branched-chain amino acid transport system / permease component RD16_RS10470 PF13458 Periplasmic binding protein RD16_RS10475 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD16_RS10475 PF00355 Rieske [2Fe-2S] domain RD16_RS10480 PF00866 Ring hydroxylating beta subunit RD16_RS10485 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS10495 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS10500 PF02515 CoA-transferase family III RD16_RS10505 PF07859 alpha/beta hydrolase fold RD16_RS10510 PF14535 AMP-binding enzyme C-terminal domain RD16_RS10510 PF00501 AMP-binding enzyme RD16_RS10515 PF00108 Thiolase, N-terminal domain RD16_RS10515 PF02803 Thiolase, C-terminal domain RD16_RS10525 PF12228 Protein of unknown function (DUF3604) RD16_RS10530 PF03466 LysR substrate binding domain RD16_RS10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS10535 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS10555 PF01152 Bacterial-like globin RD16_RS10590 PF01425 Amidase RD16_RS10595 PF01425 Amidase RD16_RS10605 PF01522 Polysaccharide deacetylase RD16_RS10610 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS10630 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS10630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD16_RS10655 PF03466 LysR substrate binding domain RD16_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS10665 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS10665 PF01799 [2Fe-2S] binding domain RD16_RS10670 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD16_RS10680 PF12833 Helix-turn-helix domain RD16_RS10680 PF06719 AraC-type transcriptional regulator N-terminus RD16_RS10700 PF07690 Major Facilitator Superfamily RD16_RS10720 PF00583 Acetyltransferase (GNAT) family RD16_RS10730 PF00005 ABC transporter RD16_RS10730 PF00664 ABC transporter transmembrane region RD16_RS10740 PF02535 ZIP Zinc transporter RD16_RS10755 PF01740 STAS domain RD16_RS10755 PF00916 Sulfate permease family RD16_RS10775 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RD16_RS10775 PF03625 Domain of unknown function DUF302 RD16_RS10785 PF12833 Helix-turn-helix domain RD16_RS10785 PF02805 Metal binding domain of Ada RD16_RS10790 PF07237 Protein of unknown function (DUF1428) RD16_RS10795 PF02567 Phenazine biosynthesis-like protein RD16_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS10800 PF03466 LysR substrate binding domain RD16_RS10805 PF04286 Protein of unknown function (DUF445) RD16_RS10820 PF00171 Aldehyde dehydrogenase family RD16_RS10825 PF01590 GAF domain RD16_RS10825 PF00158 Sigma-54 interaction domain RD16_RS10825 PF02954 Bacterial regulatory protein, Fis family RD16_RS10835 PF04172 LrgB-like family RD16_RS10840 PF03788 LrgA family RD16_RS10845 PF13649 Methyltransferase domain RD16_RS10855 PF00155 Aminotransferase class I and II RD16_RS10860 PF00202 Aminotransferase class-III RD16_RS10895 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RD16_RS10895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD16_RS10900 PF13746 4Fe-4S dicluster domain RD16_RS10900 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RD16_RS10900 PF12801 4Fe-4S binding domain RD16_RS10925 PF00005 ABC transporter RD16_RS10930 PF01061 ABC-2 type transporter RD16_RS10935 PF01594 AI-2E family transporter RD16_RS10960 PF04539 Sigma-70 region 3 RD16_RS10960 PF03979 Sigma-70 factor, region 1.1 RD16_RS10960 PF00140 Sigma-70 factor, region 1.2 RD16_RS10960 PF04546 Sigma-70, non-essential region RD16_RS10960 PF04542 Sigma-70 region 2 RD16_RS10960 PF04545 Sigma-70, region 4 RD16_RS10965 PF10410 DnaB-helicase binding domain of primase RD16_RS10965 PF08275 DNA primase catalytic core, N-terminal domain RD16_RS10965 PF01807 CHC2 zinc finger RD16_RS10965 PF08278 DNA primase DnaG DnaB-binding RD16_RS10970 PF01165 Ribosomal protein S21 RD16_RS10975 PF00156 Phosphoribosyl transferase domain RD16_RS10980 PF00709 Adenylosuccinate synthetase RD16_RS10985 PF13393 Histidyl-tRNA synthetase RD16_RS10990 PF01145 SPFH domain / Band 7 family RD16_RS10995 PF01145 SPFH domain / Band 7 family RD16_RS10995 PF12221 Bacterial membrane protein N terminal RD16_RS11000 PF16360 GTP-binding GTPase Middle Region RD16_RS11000 PF01926 50S ribosome-binding GTPase RD16_RS11000 PF13167 GTP-binding GTPase N-terminal RD16_RS11005 PF17209 Hfq protein RD16_RS11010 PF00155 Aminotransferase class I and II RD16_RS11015 PF01926 50S ribosome-binding GTPase RD16_RS11015 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RD16_RS11020 PF13360 PQQ-like domain RD16_RS11025 PF09976 Tetratricopeptide repeat-like domain RD16_RS11030 PF03129 Anticodon binding domain RD16_RS11030 PF13393 Histidyl-tRNA synthetase RD16_RS11035 PF04551 GcpE protein RD16_RS11045 PF04055 Radical SAM superfamily RD16_RS11050 PF00334 Nucleoside diphosphate kinase RD16_RS11055 PF08264 Anticodon-binding domain of tRNA RD16_RS11055 PF10458 Valyl tRNA synthetase tRNA binding arm RD16_RS11055 PF00133 tRNA synthetases class I (I, L, M and V) RD16_RS11065 PF00486 Transcriptional regulatory protein, C terminal RD16_RS11065 PF00072 Response regulator receiver domain RD16_RS11070 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS11070 PF08521 Two-component sensor kinase N-terminal RD16_RS11070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS11085 PF01266 FAD dependent oxidoreductase RD16_RS11090 PF02082 Transcriptional regulator RD16_RS11095 PF00970 Oxidoreductase FAD-binding domain RD16_RS11095 PF00175 Oxidoreductase NAD-binding domain RD16_RS11095 PF00042 Globin RD16_RS11110 PF00583 Acetyltransferase (GNAT) family RD16_RS11115 PF12802 MarR family RD16_RS11125 PF00202 Aminotransferase class-III RD16_RS11130 PF16868 NMT1-like family RD16_RS11150 PF03797 Autotransporter beta-domain RD16_RS11160 PF13091 PLD-like domain RD16_RS11160 PF13396 Phospholipase_D-nuclease N-terminal RD16_RS11165 PF01740 STAS domain RD16_RS11170 PF13581 Histidine kinase-like ATPase domain RD16_RS11175 PF00842 Alanine racemase, C-terminal domain RD16_RS11175 PF01168 Alanine racemase, N-terminal domain RD16_RS11185 PF00672 HAMP domain RD16_RS11185 PF07228 Stage II sporulation protein E (SpoIIE) RD16_RS11210 PF04542 Sigma-70 region 2 RD16_RS11210 PF08281 Sigma-70, region 4 RD16_RS11215 PF00263 Bacterial type II and III secretion system protein RD16_RS11215 PF03958 Bacterial type II/III secretion system short domain RD16_RS11225 PF01312 FlhB HrpN YscU SpaS Family RD16_RS11230 PF01311 Bacterial export proteins, family 1 RD16_RS11235 PF01313 Bacterial export proteins, family 3 RD16_RS11240 PF00813 FliP family RD16_RS11245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD16_RS11260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD16_RS11260 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD16_RS11260 PF18269 T3SS EscN ATPase C-terminal domain RD16_RS11265 PF02108 Flagellar assembly protein FliH RD16_RS11275 PF01514 Secretory protein of YscJ/FliF family RD16_RS11340 PF00771 FHIPEP family RD16_RS11370 PF01272 Transcription elongation factor, GreA/GreB, C-term RD16_RS11370 PF03449 Transcription elongation factor, N-terminal RD16_RS11375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD16_RS11375 PF00672 HAMP domain RD16_RS11375 PF02203 Tar ligand binding domain homologue RD16_RS11380 PF00860 Permease family RD16_RS11400 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS11410 PF13419 Haloacid dehalogenase-like hydrolase RD16_RS11415 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS11420 PF08402 TOBE domain RD16_RS11420 PF00005 ABC transporter RD16_RS11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS11425 PF03466 LysR substrate binding domain RD16_RS11435 PF00581 Rhodanese-like domain RD16_RS11445 PF01435 Peptidase family M48 RD16_RS11450 PF00107 Zinc-binding dehydrogenase RD16_RS11450 PF08240 Alcohol dehydrogenase GroES-like domain RD16_RS11455 PF00892 EamA-like transporter family RD16_RS11465 PF01047 MarR family RD16_RS11475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD16_RS11475 PF00529 HlyD membrane-fusion protein of T1SS RD16_RS11480 PF07690 Major Facilitator Superfamily RD16_RS11485 PF00180 Isocitrate/isopropylmalate dehydrogenase RD16_RS11490 PF00392 Bacterial regulatory proteins, gntR family RD16_RS11490 PF00155 Aminotransferase class I and II RD16_RS11495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS11500 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS11505 PF12911 N-terminal TM domain of oligopeptide transport permease C RD16_RS11505 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS11510 PF00005 ABC transporter RD16_RS11510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS11520 PF00202 Aminotransferase class-III RD16_RS11525 PF07883 Cupin domain RD16_RS11530 PF00850 Histone deacetylase domain RD16_RS11535 PF01546 Peptidase family M20/M25/M40 RD16_RS11535 PF07687 Peptidase dimerisation domain RD16_RS11545 PF00171 Aldehyde dehydrogenase family RD16_RS11550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD16_RS11555 PF00202 Aminotransferase class-III RD16_RS11560 PF01235 Sodium:alanine symporter family RD16_RS11565 PF05872 Bacterial protein of unknown function (DUF853) RD16_RS11570 PF01709 Transcriptional regulator RD16_RS11575 PF02844 Phosphoribosylglycinamide synthetase, N domain RD16_RS11575 PF02843 Phosphoribosylglycinamide synthetase, C domain RD16_RS11575 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD16_RS11580 PF01218 Coproporphyrinogen III oxidase RD16_RS11585 PF01467 Cytidylyltransferase-like RD16_RS11595 PF02590 Predicted SPOUT methyltransferase RD16_RS11600 PF02545 Maf-like protein RD16_RS11605 PF03797 Autotransporter beta-domain RD16_RS11605 PF03212 Pertactin RD16_RS11645 PF10150 Ribonuclease E/G family RD16_RS11645 PF00575 S1 RNA binding domain RD16_RS11650 PF01842 ACT domain RD16_RS11650 PF00800 Prephenate dehydratase RD16_RS11660 PF07690 Major Facilitator Superfamily RD16_RS11665 PF00005 ABC transporter RD16_RS11665 PF00664 ABC transporter transmembrane region RD16_RS11670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD16_RS11680 PF03692 Putative zinc- or iron-chelating domain RD16_RS11695 PF00884 Sulfatase RD16_RS11700 PF00534 Glycosyl transferases group 1 RD16_RS11700 PF13439 Glycosyltransferase Family 4 RD16_RS11705 PF00535 Glycosyl transferase family 2 RD16_RS11710 PF01522 Polysaccharide deacetylase RD16_RS11715 PF13439 Glycosyltransferase Family 4 RD16_RS11715 PF00534 Glycosyl transferases group 1 RD16_RS11720 PF14579 Helix-hairpin-helix motif RD16_RS11720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RD16_RS11720 PF07733 Bacterial DNA polymerase III alpha NTPase domain RD16_RS11720 PF02811 PHP domain RD16_RS11720 PF01336 OB-fold nucleic acid binding domain RD16_RS11730 PF04408 Helicase associated domain (HA2) RD16_RS11730 PF00271 Helicase conserved C-terminal domain RD16_RS11730 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RD16_RS11730 PF11898 Domain of unknown function (DUF3418) RD16_RS11730 PF00270 DEAD/DEAH box helicase RD16_RS11735 PF00583 Acetyltransferase (GNAT) family RD16_RS11735 PF00696 Amino acid kinase family RD16_RS11740 PF04362 Bacterial Fe(2+) trafficking RD16_RS11745 PF04185 Phosphoesterase family RD16_RS11745 PF05506 Domain of unknown function (DUF756) RD16_RS11750 PF01895 PhoU domain RD16_RS11755 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RD16_RS11760 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS11760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS11760 PF18158 Adaptive response protein AidB N-terminal domain RD16_RS11765 PF02646 RmuC family RD16_RS11775 PF02245 Methylpurine-DNA glycosylase (MPG) RD16_RS11785 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS11790 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS11795 PF08402 TOBE domain RD16_RS11795 PF00005 ABC transporter RD16_RS11800 PF13416 Bacterial extracellular solute-binding protein RD16_RS11820 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS11830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS11830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD16_RS11850 PF00285 Citrate synthase, C-terminal domain RD16_RS11855 PF03937 Flavinator of succinate dehydrogenase RD16_RS11860 PF13085 2Fe-2S iron-sulfur cluster binding domain RD16_RS11865 PF02910 Fumarate reductase flavoprotein C-term RD16_RS11865 PF00890 FAD binding domain RD16_RS11870 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD16_RS11875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD16_RS11880 PF07702 UTRA domain RD16_RS11880 PF00392 Bacterial regulatory proteins, gntR family RD16_RS11885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RD16_RS11885 PF00056 lactate/malate dehydrogenase, NAD binding domain RD16_RS11895 PF00285 Citrate synthase, C-terminal domain RD16_RS11900 PF00694 Aconitase C-terminal domain RD16_RS11900 PF00330 Aconitase family (aconitate hydratase) RD16_RS11905 PF04303 PrpF protein RD16_RS11910 PF03972 MmgE/PrpD family RD16_RS11915 PF03653 Uncharacterised protein family (UPF0093) RD16_RS11920 PF02926 THUMP domain RD16_RS11920 PF01170 Putative RNA methylase family UPF0020 RD16_RS11940 PF00501 AMP-binding enzyme RD16_RS11940 PF13193 AMP-binding enzyme C-terminal domain RD16_RS11940 PF16177 Acetyl-coenzyme A synthetase N-terminus RD16_RS11950 PF01430 Hsp33 protein RD16_RS11975 PF00211 Adenylate and Guanylate cyclase catalytic domain RD16_RS11980 PF04977 Septum formation initiator RD16_RS11985 PF03952 Enolase, N-terminal domain RD16_RS11985 PF00113 Enolase, C-terminal TIM barrel domain RD16_RS11995 PF00793 DAHP synthetase I family RD16_RS12000 PF06418 CTP synthase N-terminus RD16_RS12000 PF00117 Glutamine amidotransferase class-I RD16_RS12010 PF01321 Creatinase/Prolidase N-terminal domain RD16_RS12010 PF00557 Metallopeptidase family M24 RD16_RS12020 PF03576 Peptidase family S58 RD16_RS12025 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS12025 PF12911 N-terminal TM domain of oligopeptide transport permease C RD16_RS12030 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS12035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS12040 PF00005 ABC transporter RD16_RS12040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS12045 PF01112 Asparaginase RD16_RS12055 PF01144 Coenzyme A transferase RD16_RS12075 PF16363 GDP-mannose 4,6 dehydratase RD16_RS12090 PF01212 Beta-eliminating lyase RD16_RS12095 PF00892 EamA-like transporter family RD16_RS12100 PF16177 Acetyl-coenzyme A synthetase N-terminus RD16_RS12100 PF00501 AMP-binding enzyme RD16_RS12100 PF13193 AMP-binding enzyme C-terminal domain RD16_RS12110 PF03928 Haem-degrading RD16_RS12115 PF16177 Acetyl-coenzyme A synthetase N-terminus RD16_RS12115 PF13193 AMP-binding enzyme C-terminal domain RD16_RS12115 PF00501 AMP-binding enzyme RD16_RS12120 PF00877 NlpC/P60 family RD16_RS12135 PF03466 LysR substrate binding domain RD16_RS12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS12140 PF00171 Aldehyde dehydrogenase family RD16_RS12150 PF03466 LysR substrate binding domain RD16_RS12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS12160 PF02789 Cytosol aminopeptidase family, N-terminal domain RD16_RS12160 PF00883 Cytosol aminopeptidase family, catalytic domain RD16_RS12165 PF04364 DNA polymerase III chi subunit, HolC RD16_RS12175 PF01027 Inhibitor of apoptosis-promoting Bax1 RD16_RS12180 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS12195 PF00291 Pyridoxal-phosphate dependent enzyme RD16_RS12205 PF02565 Recombination protein O C terminal RD16_RS12205 PF11967 Recombination protein O N terminal RD16_RS12210 PF07650 KH domain RD16_RS12210 PF01926 50S ribosome-binding GTPase RD16_RS12215 PF14622 Ribonuclease-III-like RD16_RS12215 PF00035 Double-stranded RNA binding motif RD16_RS12220 PF10502 Signal peptidase, peptidase S26 RD16_RS12225 PF00679 Elongation factor G C-terminus RD16_RS12225 PF00009 Elongation factor Tu GTP binding domain RD16_RS12225 PF06421 GTP-binding protein LepA C-terminus RD16_RS12225 PF03144 Elongation factor Tu domain 2 RD16_RS12230 PF13180 PDZ domain RD16_RS12245 PF04542 Sigma-70 region 2 RD16_RS12245 PF08281 Sigma-70, region 4 RD16_RS12255 PF00109 Beta-ketoacyl synthase, N-terminal domain RD16_RS12255 PF02801 Beta-ketoacyl synthase, C-terminal domain RD16_RS12260 PF00550 Phosphopantetheine attachment site RD16_RS12270 PF00698 Acyl transferase domain RD16_RS12275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD16_RS12275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD16_RS12280 PF02504 Fatty acid synthesis protein RD16_RS12285 PF01783 Ribosomal L32p protein family RD16_RS12290 PF02620 Large ribosomal RNA subunit accumulation protein YceD RD16_RS12295 PF02545 Maf-like protein RD16_RS12305 PF01510 N-acetylmuramoyl-L-alanine amidase RD16_RS12310 PF12805 FUSC-like inner membrane protein yccS RD16_RS12320 PF03883 Peroxide stress protein YaaA RD16_RS12330 PF00106 short chain dehydrogenase RD16_RS12335 PF00999 Sodium/hydrogen exchanger family RD16_RS12335 PF02254 TrkA-N domain RD16_RS12345 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RD16_RS12355 PF04183 IucA / IucC family RD16_RS12355 PF06276 Ferric iron reductase FhuF-like transporter RD16_RS12375 PF07690 Major Facilitator Superfamily RD16_RS12380 PF07660 Secretin and TonB N terminus short domain RD16_RS12380 PF07715 TonB-dependent Receptor Plug Domain RD16_RS12380 PF00593 TonB dependent receptor RD16_RS12395 PF17151 Periplasmic sensor domain RD16_RS12395 PF00990 Diguanylate cyclase, GGDEF domain RD16_RS12420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD16_RS12420 PF02403 Seryl-tRNA synthetase N-terminal domain RD16_RS12425 PF12002 MgsA AAA+ ATPase C terminal RD16_RS12425 PF16193 AAA C-terminal domain RD16_RS12425 PF00004 ATPase family associated with various cellular activities (AAA) RD16_RS12430 PF03548 Outer membrane lipoprotein carrier protein LolA RD16_RS12435 PF09397 Ftsk gamma domain RD16_RS12435 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RD16_RS12435 PF01580 FtsK/SpoIIIE family RD16_RS12435 PF17854 FtsK alpha domain RD16_RS12440 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS12445 PF00488 MutS domain V RD16_RS12445 PF01713 Smr domain RD16_RS12450 PF00893 Small Multidrug Resistance protein RD16_RS12460 PF00474 Sodium:solute symporter family RD16_RS12470 PF03814 Potassium-transporting ATPase A subunit RD16_RS12480 PF02669 K+-transporting ATPase, c chain RD16_RS12485 PF13493 Domain of unknown function (DUF4118) RD16_RS12485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS12485 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS12485 PF02702 Osmosensitive K+ channel His kinase sensor domain RD16_RS12485 PF13492 GAF domain RD16_RS12490 PF00072 Response regulator receiver domain RD16_RS12490 PF00486 Transcriptional regulatory protein, C terminal RD16_RS12510 PF00180 Isocitrate/isopropylmalate dehydrogenase RD16_RS12525 PF00034 Cytochrome c RD16_RS12535 PF00004 ATPase family associated with various cellular activities (AAA) RD16_RS12535 PF17862 AAA+ lid domain RD16_RS12535 PF01434 Peptidase family M41 RD16_RS12555 PF00675 Insulinase (Peptidase family M16) RD16_RS12555 PF05193 Peptidase M16 inactive domain RD16_RS12560 PF00226 DnaJ domain RD16_RS12560 PF01556 DnaJ C terminal domain RD16_RS12560 PF00684 DnaJ central domain RD16_RS12565 PF00012 Hsp70 protein RD16_RS12575 PF01025 GrpE RD16_RS12585 PF00762 Ferrochelatase RD16_RS12590 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RD16_RS12590 PF01628 HrcA protein C terminal domain RD16_RS12595 PF01513 ATP-NAD kinase RD16_RS12600 PF02463 RecF/RecN/SMC N terminal domain RD16_RS12605 PF01475 Ferric uptake regulator family RD16_RS12610 PF04355 SmpA / OmlA family RD16_RS12615 PF05173 Dihydrodipicolinate reductase, C-terminus RD16_RS12615 PF01113 Dihydrodipicolinate reductase, N-terminus RD16_RS12620 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RD16_RS12620 PF01565 FAD binding domain RD16_RS12630 PF00561 alpha/beta hydrolase fold RD16_RS12640 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS12645 PF00551 Formyl transferase RD16_RS12655 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD16_RS12655 PF01571 Aminomethyltransferase folate-binding domain RD16_RS12655 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS12655 PF17806 Sarcosine oxidase A3 domain RD16_RS12660 PF04267 Sarcosine oxidase, delta subunit family RD16_RS12665 PF01266 FAD dependent oxidoreductase RD16_RS12675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS12675 PF03466 LysR substrate binding domain RD16_RS12680 PF02615 Malate/L-lactate dehydrogenase RD16_RS12685 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD16_RS12685 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD16_RS12690 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS12710 PF00437 Type II/IV secretion system protein RD16_RS12715 PF00263 Bacterial type II and III secretion system protein RD16_RS12715 PF13629 Pilus formation protein N terminal region RD16_RS12715 PF04972 BON domain RD16_RS12750 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD16_RS12755 PF00719 Inorganic pyrophosphatase RD16_RS12775 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RD16_RS12775 PF03900 Porphobilinogen deaminase, C-terminal domain RD16_RS12780 PF03741 Integral membrane protein TerC family RD16_RS12785 PF03741 Integral membrane protein TerC family RD16_RS12790 PF00549 CoA-ligase RD16_RS12790 PF02629 CoA binding domain RD16_RS12795 PF00549 CoA-ligase RD16_RS12795 PF08442 ATP-grasp domain RD16_RS12805 PF01717 Cobalamin-independent synthase, Catalytic domain RD16_RS12805 PF08267 Cobalamin-independent synthase, N-terminal domain RD16_RS12810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS12810 PF03466 LysR substrate binding domain RD16_RS12815 PF02631 RecX family RD16_RS12820 PF00154 recA bacterial DNA recombination protein RD16_RS12825 PF00486 Transcriptional regulatory protein, C terminal RD16_RS12825 PF00072 Response regulator receiver domain RD16_RS12830 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS12830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS12835 PF00083 Sugar (and other) transporter RD16_RS12835 PF08946 Osmosensory transporter coiled coil RD16_RS12840 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS12840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD16_RS12840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD16_RS12845 PF08402 TOBE domain RD16_RS12845 PF00005 ABC transporter RD16_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS12860 PF00106 short chain dehydrogenase RD16_RS12880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS12880 PF03466 LysR substrate binding domain RD16_RS12885 PF02515 CoA-transferase family III RD16_RS12895 PF04381 Putative exonuclease, RdgC RD16_RS12900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD16_RS12900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD16_RS12920 PF04231 Endonuclease I RD16_RS12970 PF00216 Bacterial DNA-binding protein RD16_RS12975 PF01588 Putative tRNA binding domain RD16_RS12975 PF03484 tRNA synthetase B5 domain RD16_RS12975 PF03483 B3/4 domain RD16_RS12975 PF03147 Ferredoxin-fold anticodon binding domain RD16_RS12975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RD16_RS12980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RD16_RS12980 PF01409 tRNA synthetases class II core domain (F) RD16_RS12985 PF00453 Ribosomal protein L20 RD16_RS12990 PF01632 Ribosomal protein L35 RD16_RS13000 PF00692 dUTPase RD16_RS13010 PF00392 Bacterial regulatory proteins, gntR family RD16_RS13010 PF00155 Aminotransferase class I and II RD16_RS13025 PF13847 Methyltransferase domain RD16_RS13035 PF09335 SNARE associated Golgi protein RD16_RS13060 PF00356 Bacterial regulatory proteins, lacI family RD16_RS13065 PF00005 ABC transporter RD16_RS13065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS13070 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS13070 PF12911 N-terminal TM domain of oligopeptide transport permease C RD16_RS13075 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS13080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS13085 PF07687 Peptidase dimerisation domain RD16_RS13085 PF01546 Peptidase family M20/M25/M40 RD16_RS13095 PF01810 LysE type translocator RD16_RS13105 PF00155 Aminotransferase class I and II RD16_RS13105 PF00392 Bacterial regulatory proteins, gntR family RD16_RS13110 PF07690 Major Facilitator Superfamily RD16_RS13115 PF00107 Zinc-binding dehydrogenase RD16_RS13115 PF08240 Alcohol dehydrogenase GroES-like domain RD16_RS13130 PF03466 LysR substrate binding domain RD16_RS13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS13135 PF01965 DJ-1/PfpI family RD16_RS13135 PF12833 Helix-turn-helix domain RD16_RS13140 PF12706 Beta-lactamase superfamily domain RD16_RS13155 PF00753 Metallo-beta-lactamase superfamily RD16_RS13155 PF10996 Beta-Casp domain RD16_RS13155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RD16_RS13160 PF01740 STAS domain RD16_RS13160 PF00916 Sulfate permease family RD16_RS13165 PF01965 DJ-1/PfpI family RD16_RS13180 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS13185 PF00005 ABC transporter RD16_RS13195 PF01979 Amidohydrolase family RD16_RS13210 PF07690 Major Facilitator Superfamily RD16_RS13220 PF07804 HipA-like C-terminal domain RD16_RS13220 PF13657 HipA N-terminal domain RD16_RS13230 PF02540 NAD synthase RD16_RS13230 PF00958 GMP synthase C terminal domain RD16_RS13230 PF00117 Glutamine amidotransferase class-I RD16_RS13235 PF00478 IMP dehydrogenase / GMP reductase domain RD16_RS13235 PF00571 CBS domain RD16_RS13255 PF00196 Bacterial regulatory proteins, luxR family RD16_RS13255 PF00072 Response regulator receiver domain RD16_RS13280 PF00149 Calcineurin-like phosphoesterase RD16_RS13280 PF12320 Type 5 capsule protein repressor C-terminal domain RD16_RS13285 PF01266 FAD dependent oxidoreductase RD16_RS13290 PF01037 Lrp/AsnC ligand binding domain RD16_RS13315 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS13325 PF17912 MalK OB fold domain RD16_RS13325 PF00005 ABC transporter RD16_RS13330 PF17912 MalK OB fold domain RD16_RS13330 PF00005 ABC transporter RD16_RS13335 PF08220 DeoR-like helix-turn-helix domain RD16_RS13335 PF00455 DeoR C terminal sensor domain RD16_RS13340 PF01266 FAD dependent oxidoreductase RD16_RS13340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RD16_RS13355 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS13360 PF00890 FAD binding domain RD16_RS13360 PF14537 Cytochrome c3 RD16_RS13385 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS13390 PF00701 Dihydrodipicolinate synthetase family RD16_RS13410 PF00472 RF-1 domain RD16_RS13420 PF01242 6-pyruvoyl tetrahydropterin synthase RD16_RS13425 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS13430 PF00596 Class II Aldolase and Adducin N-terminal domain RD16_RS13455 PF13018 Extended Signal Peptide of Type V secretion system RD16_RS13455 PF05594 Haemagluttinin repeat RD16_RS13455 PF13332 Hemagglutinin repeat RD16_RS13455 PF05860 haemagglutination activity domain RD16_RS13460 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RD16_RS13460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RD16_RS13460 PF02769 AIR synthase related protein, C-terminal domain RD16_RS13465 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD16_RS13470 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD16_RS13470 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD16_RS13475 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS13495 PF16970 Type-1 fimbrial protein, A RD16_RS13500 PF00501 AMP-binding enzyme RD16_RS13500 PF14535 AMP-binding enzyme C-terminal domain RD16_RS13505 PF03061 Thioesterase superfamily RD16_RS13510 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS13515 PF00171 Aldehyde dehydrogenase family RD16_RS13525 PF00175 Oxidoreductase NAD-binding domain RD16_RS13525 PF00970 Oxidoreductase FAD-binding domain RD16_RS13525 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS13530 PF01883 Iron-sulfur cluster assembly protein RD16_RS13535 PF05138 Phenylacetic acid catabolic protein RD16_RS13540 PF06243 Phenylacetic acid degradation B RD16_RS13545 PF05138 Phenylacetic acid catabolic protein RD16_RS13550 PF08223 PaaX-like protein C-terminal domain RD16_RS13550 PF07848 PaaX-like protein RD16_RS13555 PF03853 YjeF-related protein N-terminus RD16_RS13560 PF00929 Exonuclease RD16_RS13565 PF01435 Peptidase family M48 RD16_RS13570 PF03193 RsgA GTPase RD16_RS13575 PF12911 N-terminal TM domain of oligopeptide transport permease C RD16_RS13575 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS13580 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS13585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS13595 PF03466 LysR substrate binding domain RD16_RS13620 PF00543 Nitrogen regulatory protein P-II RD16_RS13625 PF02540 NAD synthase RD16_RS13625 PF00795 Carbon-nitrogen hydrolase RD16_RS13630 PF00924 Mechanosensitive ion channel RD16_RS13635 PF14698 Argininosuccinate lyase C-terminal RD16_RS13635 PF00206 Lyase RD16_RS13655 PF06463 Molybdenum Cofactor Synthesis C RD16_RS13655 PF04055 Radical SAM superfamily RD16_RS13660 PF03453 MoeA N-terminal region (domain I and II) RD16_RS13660 PF03454 MoeA C-terminal region (domain IV) RD16_RS13660 PF00994 Probable molybdopterin binding domain RD16_RS13665 PF00994 Probable molybdopterin binding domain RD16_RS13670 PF02391 MoaE protein RD16_RS13680 PF01967 MoaC family RD16_RS13690 PF01738 Dienelactone hydrolase family RD16_RS13700 PF08534 Redoxin RD16_RS13715 PF04055 Radical SAM superfamily RD16_RS13715 PF06968 Biotin and Thiamin Synthesis associated domain RD16_RS13735 PF00403 Heavy-metal-associated domain RD16_RS13740 PF13411 MerR HTH family regulatory protein RD16_RS13760 PF02104 SURF1 family RD16_RS13765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RD16_RS13770 PF00510 Cytochrome c oxidase subunit III RD16_RS13775 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD16_RS13785 PF07690 Major Facilitator Superfamily RD16_RS13785 PF00083 Sugar (and other) transporter RD16_RS13800 PF04380 Membrane fusogenic activity RD16_RS13805 PF00543 Nitrogen regulatory protein P-II RD16_RS13815 PF03797 Autotransporter beta-domain RD16_RS13815 PF03212 Pertactin RD16_RS13825 PF00440 Bacterial regulatory proteins, tetR family RD16_RS13830 PF07690 Major Facilitator Superfamily RD16_RS13835 PF00005 ABC transporter RD16_RS13840 PF00005 ABC transporter RD16_RS13840 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS13845 PF02653 Branched-chain amino acid transport system / permease component RD16_RS13845 PF11862 Domain of unknown function (DUF3382) RD16_RS13850 PF02653 Branched-chain amino acid transport system / permease component RD16_RS13855 PF13458 Periplasmic binding protein RD16_RS13865 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RD16_RS13865 PF14850 DNA-binding domain of Proline dehydrogenase RD16_RS13865 PF01619 Proline dehydrogenase RD16_RS13865 PF00171 Aldehyde dehydrogenase family RD16_RS13875 PF02470 MlaD protein RD16_RS13880 PF04403 Paraquat-inducible protein A RD16_RS13885 PF00004 ATPase family associated with various cellular activities (AAA) RD16_RS13885 PF17871 AAA lid domain RD16_RS13885 PF02861 Clp amino terminal domain, pathogenicity island component RD16_RS13885 PF10431 C-terminal, D2-small domain, of ClpB protein RD16_RS13885 PF07724 AAA domain (Cdc48 subfamily) RD16_RS13890 PF00912 Transglycosylase RD16_RS13890 PF06832 Penicillin-Binding Protein C-terminus Family RD16_RS13890 PF00905 Penicillin binding protein transpeptidase domain RD16_RS13895 PF00207 Alpha-2-macroglobulin family RD16_RS13895 PF07703 Alpha-2-macroglobulin bait region domain RD16_RS13895 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain RD16_RS13895 PF17962 Bacterial macroglobulin domain 6 RD16_RS13895 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain RD16_RS13895 PF11974 Bacterial alpha-2-macroglobulin MG3 domain RD16_RS13895 PF01835 MG2 domain RD16_RS13895 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain RD16_RS13900 PF02617 ATP-dependent Clp protease adaptor protein ClpS RD16_RS13905 PF00313 'Cold-shock' DNA-binding domain RD16_RS13915 PF00108 Thiolase, N-terminal domain RD16_RS13915 PF02803 Thiolase, C-terminal domain RD16_RS13920 PF00654 Voltage gated chloride channel RD16_RS13925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD16_RS13925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD16_RS13930 PF02601 Exonuclease VII, large subunit RD16_RS13930 PF13742 OB-fold nucleic acid binding domain RD16_RS13940 PF01618 MotA/TolQ/ExbB proton channel family RD16_RS13945 PF02472 Biopolymer transport protein ExbD/TolR RD16_RS13950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RD16_RS13955 PF03966 Trm112p-like protein RD16_RS13960 PF02348 Cytidylyltransferase RD16_RS13965 PF05191 Adenylate kinase, active site lid RD16_RS13970 PF00106 short chain dehydrogenase RD16_RS13975 PF03023 Lipid II flippase MurJ RD16_RS13985 PF01649 Ribosomal protein S20 RD16_RS13990 PF03328 HpcH/HpaI aldolase/citrate lyase family RD16_RS14005 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS14015 PF02615 Malate/L-lactate dehydrogenase RD16_RS14030 PF14821 Threonine synthase N terminus RD16_RS14030 PF00291 Pyridoxal-phosphate dependent enzyme RD16_RS14035 PF03447 Homoserine dehydrogenase, NAD binding domain RD16_RS14035 PF00742 Homoserine dehydrogenase RD16_RS14035 PF01842 ACT domain RD16_RS14040 PF00155 Aminotransferase class I and II RD16_RS14045 PF04430 Protein of unknown function (DUF498/DUF598) RD16_RS14050 PF00578 AhpC/TSA family RD16_RS14055 PF02562 PhoH-like protein RD16_RS14055 PF13638 PIN domain RD16_RS14060 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD16_RS14065 PF13593 SBF-like CPA transporter family (DUF4137) RD16_RS14070 PF03796 DnaB-like helicase C terminal domain RD16_RS14070 PF00772 DnaB-like helicase N terminal domain RD16_RS14080 PF03948 Ribosomal protein L9, C-terminal domain RD16_RS14080 PF01281 Ribosomal protein L9, N-terminal domain RD16_RS14085 PF01084 Ribosomal protein S18 RD16_RS14095 PF01250 Ribosomal protein S6 RD16_RS14100 PF02649 Type I GTP cyclohydrolase folE2 RD16_RS14105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RD16_RS14105 PF02779 Transketolase, pyrimidine binding domain RD16_RS14105 PF02780 Transketolase, C-terminal domain RD16_RS14110 PF00348 Polyprenyl synthetase RD16_RS14115 PF02609 Exonuclease VII small subunit RD16_RS14125 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS14145 PF00571 CBS domain RD16_RS14145 PF01769 Divalent cation transporter RD16_RS14145 PF03448 MgtE intracellular N domain RD16_RS14150 PF03061 Thioesterase superfamily RD16_RS14155 PF03601 Conserved hypothetical protein 698 RD16_RS14160 PF03466 LysR substrate binding domain RD16_RS14160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS14165 PF07687 Peptidase dimerisation domain RD16_RS14165 PF01546 Peptidase family M20/M25/M40 RD16_RS14170 PF13193 AMP-binding enzyme C-terminal domain RD16_RS14170 PF00501 AMP-binding enzyme RD16_RS14180 PF00459 Inositol monophosphatase family RD16_RS14190 PF13802 Galactose mutarotase-like RD16_RS14190 PF01055 Glycosyl hydrolases family 31 RD16_RS14195 PF09383 NIL domain RD16_RS14195 PF00005 ABC transporter RD16_RS14200 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS14205 PF03180 NLPA lipoprotein RD16_RS14220 PF00465 Iron-containing alcohol dehydrogenase RD16_RS14245 PF00392 Bacterial regulatory proteins, gntR family RD16_RS14245 PF07729 FCD domain RD16_RS14250 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS14270 PF14785 Maltose transport system permease protein MalF P2 domain RD16_RS14270 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS14275 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS14280 PF00005 ABC transporter RD16_RS14280 PF08402 TOBE domain RD16_RS14285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD16_RS14285 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS14295 PF01547 Bacterial extracellular solute-binding protein RD16_RS14310 PF09278 MerR, DNA binding RD16_RS14310 PF00376 MerR family regulatory protein RD16_RS14315 PF03352 Methyladenine glycosylase RD16_RS14320 PF05170 AsmA family RD16_RS14325 PF00440 Bacterial regulatory proteins, tetR family RD16_RS14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS14370 PF03466 LysR substrate binding domain RD16_RS14375 PF02548 Ketopantoate hydroxymethyltransferase RD16_RS14380 PF13609 Gram-negative porin RD16_RS14400 PF00083 Sugar (and other) transporter RD16_RS14410 PF03466 LysR substrate binding domain RD16_RS14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS14415 PF00155 Aminotransferase class I and II RD16_RS14420 PF01966 HD domain RD16_RS14425 PF00403 Heavy-metal-associated domain RD16_RS14445 PF08240 Alcohol dehydrogenase GroES-like domain RD16_RS14445 PF00107 Zinc-binding dehydrogenase RD16_RS14460 PF00005 ABC transporter RD16_RS14465 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS14475 PF00501 AMP-binding enzyme RD16_RS14475 PF13193 AMP-binding enzyme C-terminal domain RD16_RS14485 PF01037 Lrp/AsnC ligand binding domain RD16_RS14485 PF13404 AsnC-type helix-turn-helix domain RD16_RS14490 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS14495 PF00677 Lumazine binding domain RD16_RS14500 PF01425 Amidase RD16_RS14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS14515 PF03466 LysR substrate binding domain RD16_RS14520 PF07690 Major Facilitator Superfamily RD16_RS14525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD16_RS14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS14535 PF03466 LysR substrate binding domain RD16_RS14550 PF01594 AI-2E family transporter RD16_RS14570 PF01322 Cytochrome C' RD16_RS14575 PF08328 Adenylosuccinate lyase C-terminal RD16_RS14575 PF00206 Lyase RD16_RS14580 PF00043 Glutathione S-transferase, C-terminal domain RD16_RS14580 PF13417 Glutathione S-transferase, N-terminal domain RD16_RS14585 PF01925 Sulfite exporter TauE/SafE RD16_RS14595 PF03466 LysR substrate binding domain RD16_RS14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS14600 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS14610 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD16_RS14610 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RD16_RS14625 PF07715 TonB-dependent Receptor Plug Domain RD16_RS14625 PF00593 TonB dependent receptor RD16_RS14630 PF00756 Putative esterase RD16_RS14635 PF02754 Cysteine-rich domain RD16_RS14635 PF13183 4Fe-4S dicluster domain RD16_RS14640 PF01565 FAD binding domain RD16_RS14645 PF02913 FAD linked oxidases, C-terminal domain RD16_RS14645 PF01565 FAD binding domain RD16_RS14650 PF02913 FAD linked oxidases, C-terminal domain RD16_RS14650 PF01565 FAD binding domain RD16_RS14655 PF05860 haemagglutination activity domain RD16_RS14655 PF13332 Hemagglutinin repeat RD16_RS14655 PF05860 haemagglutination activity domain RD16_RS14655 PF05594 Haemagluttinin repeat RD16_RS14655 PF05594 Haemagluttinin repeat RD16_RS14655 PF13018 Extended Signal Peptide of Type V secretion system RD16_RS14655 PF13018 Extended Signal Peptide of Type V secretion system RD16_RS14655 PF13332 Hemagglutinin repeat RD16_RS14660 PF00793 DAHP synthetase I family RD16_RS14665 PF01523 Putative modulator of DNA gyrase RD16_RS14670 PF00795 Carbon-nitrogen hydrolase RD16_RS14690 PF08281 Sigma-70, region 4 RD16_RS14690 PF04542 Sigma-70 region 2 RD16_RS14700 PF04461 Protein of unknown function (DUF520) RD16_RS14715 PF01551 Peptidase family M23 RD16_RS14715 PF01476 LysM domain RD16_RS14730 PF00593 TonB dependent receptor RD16_RS14730 PF07715 TonB-dependent Receptor Plug Domain RD16_RS14745 PF05114 Protein of unknown function (DUF692) RD16_RS14760 PF07690 Major Facilitator Superfamily RD16_RS14765 PF01022 Bacterial regulatory protein, arsR family RD16_RS14770 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RD16_RS14775 PF00510 Cytochrome c oxidase subunit III RD16_RS14780 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD16_RS14785 PF06481 COX Aromatic Rich Motif RD16_RS14785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD16_RS14790 PF00072 Response regulator receiver domain RD16_RS14805 PF02678 Pirin RD16_RS14805 PF05726 Pirin C-terminal cupin domain RD16_RS14825 PF02515 CoA-transferase family III RD16_RS14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS14830 PF03466 LysR substrate binding domain RD16_RS14835 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS14845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS14845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS14845 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS14845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS14845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS14845 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS14860 PF01872 RibD C-terminal domain RD16_RS14860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD16_RS14875 PF03477 ATP cone domain RD16_RS14880 PF00464 Serine hydroxymethyltransferase RD16_RS14890 PF01479 S4 domain RD16_RS14890 PF00579 tRNA synthetases class I (W and Y) RD16_RS14900 PF01551 Peptidase family M23 RD16_RS14900 PF08460 Bacterial SH3 domain RD16_RS14905 PF03702 Anhydro-N-acetylmuramic acid kinase RD16_RS14910 PF01521 Iron-sulphur cluster biosynthesis RD16_RS14920 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD16_RS14920 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD16_RS14925 PF00380 Ribosomal protein S9/S16 RD16_RS14930 PF00572 Ribosomal protein L13 RD16_RS14935 PF03480 Bacterial extracellular solute-binding protein, family 7 RD16_RS14940 PF01523 Putative modulator of DNA gyrase RD16_RS14945 PF04751 Protein of unknown function (DUF615) RD16_RS14950 PF02230 Phospholipase/Carboxylesterase RD16_RS14960 PF00005 ABC transporter RD16_RS14965 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS14970 PF00857 Isochorismatase family RD16_RS14975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD16_RS14980 PF03880 DbpA RNA binding domain RD16_RS14980 PF00270 DEAD/DEAH box helicase RD16_RS14980 PF00271 Helicase conserved C-terminal domain RD16_RS14990 PF07729 FCD domain RD16_RS14990 PF00392 Bacterial regulatory proteins, gntR family RD16_RS15000 PF13380 CoA binding domain RD16_RS15000 PF13607 Succinyl-CoA ligase like flavodoxin domain RD16_RS15000 PF00583 Acetyltransferase (GNAT) family RD16_RS15005 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD16_RS15020 PF01037 Lrp/AsnC ligand binding domain RD16_RS15035 PF03477 ATP cone domain RD16_RS15035 PF02867 Ribonucleotide reductase, barrel domain RD16_RS15035 PF00317 Ribonucleotide reductase, all-alpha domain RD16_RS15040 PF00268 Ribonucleotide reductase, small chain RD16_RS15055 PF13193 AMP-binding enzyme C-terminal domain RD16_RS15055 PF00501 AMP-binding enzyme RD16_RS15060 PF03062 MBOAT, membrane-bound O-acyltransferase family RD16_RS15085 PF00294 pfkB family carbohydrate kinase RD16_RS15100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD16_RS15100 PF02785 Biotin carboxylase C-terminal domain RD16_RS15100 PF00289 Biotin carboxylase, N-terminal domain RD16_RS15105 PF00364 Biotin-requiring enzyme RD16_RS15110 PF01220 Dehydroquinase class II RD16_RS15115 PF08534 Redoxin RD16_RS15120 PF01225 Mur ligase family, catalytic domain RD16_RS15120 PF08245 Mur ligase middle domain RD16_RS15120 PF02875 Mur ligase family, glutamate ligase domain RD16_RS15125 PF05728 Uncharacterised protein family (UPF0227) RD16_RS15130 PF00773 RNB domain RD16_RS15140 PF08501 Shikimate dehydrogenase substrate binding domain RD16_RS15140 PF01488 Shikimate / quinate 5-dehydrogenase RD16_RS15140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RD16_RS15155 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP RD16_RS15165 PF01037 Lrp/AsnC ligand binding domain RD16_RS15170 PF01266 FAD dependent oxidoreductase RD16_RS15175 PF00106 short chain dehydrogenase RD16_RS15185 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS15195 PF07516 SecA Wing and Scaffold domain RD16_RS15195 PF02810 SEC-C motif RD16_RS15195 PF01043 SecA preprotein cross-linking domain RD16_RS15195 PF07517 SecA DEAD-like domain RD16_RS15200 PF01476 LysM domain RD16_RS15200 PF08525 Opacity-associated protein A N-terminal motif RD16_RS15200 PF01551 Peptidase family M23 RD16_RS15210 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RD16_RS15215 PF12327 FtsZ family, C-terminal domain RD16_RS15215 PF00091 Tubulin/FtsZ family, GTPase domain RD16_RS15220 PF02491 SHS2 domain inserted in FTSA RD16_RS15225 PF03799 Cell division protein FtsQ RD16_RS15225 PF08478 POTRA domain, FtsQ-type RD16_RS15230 PF01820 D-ala D-ala ligase N-terminus RD16_RS15230 PF07478 D-ala D-ala ligase C-terminus RD16_RS15235 PF01225 Mur ligase family, catalytic domain RD16_RS15235 PF02875 Mur ligase family, glutamate ligase domain RD16_RS15235 PF08245 Mur ligase middle domain RD16_RS15240 PF03033 Glycosyltransferase family 28 N-terminal domain RD16_RS15240 PF04101 Glycosyltransferase family 28 C-terminal domain RD16_RS15245 PF01098 Cell cycle protein RD16_RS15250 PF02875 Mur ligase family, glutamate ligase domain RD16_RS15250 PF08245 Mur ligase middle domain RD16_RS15255 PF00953 Glycosyl transferase family 4 RD16_RS15260 PF08245 Mur ligase middle domain RD16_RS15260 PF02875 Mur ligase family, glutamate ligase domain RD16_RS15265 PF03717 Penicillin-binding Protein dimerisation domain RD16_RS15265 PF00905 Penicillin binding protein transpeptidase domain RD16_RS15270 PF04999 Cell division protein FtsL RD16_RS15275 PF01795 MraW methylase family RD16_RS15280 PF02381 MraZ protein, putative antitoxin-like RD16_RS15290 PF12848 ABC transporter RD16_RS15290 PF16326 ABC transporter C-terminal domain RD16_RS15290 PF00005 ABC transporter RD16_RS15295 PF01979 Amidohydrolase family RD16_RS15300 PF01546 Peptidase family M20/M25/M40 RD16_RS15300 PF07687 Peptidase dimerisation domain RD16_RS15340 PF01037 Lrp/AsnC ligand binding domain RD16_RS15345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD16_RS15350 PF01625 Peptide methionine sulfoxide reductase RD16_RS15355 PF00034 Cytochrome c RD16_RS15360 PF00920 Dehydratase family RD16_RS15365 PF01790 Prolipoprotein diacylglyceryl transferase RD16_RS15405 PF01970 Tripartite tricarboxylate transporter TctA family RD16_RS15415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD16_RS15415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD16_RS15420 PF02525 Flavodoxin-like fold RD16_RS15430 PF03167 Uracil DNA glycosylase superfamily RD16_RS15435 PF00271 Helicase conserved C-terminal domain RD16_RS15435 PF00270 DEAD/DEAH box helicase RD16_RS15445 PF01743 Poly A polymerase head domain RD16_RS15445 PF12627 Probable RNA and SrmB- binding site of polymerase A RD16_RS15450 PF14718 Soluble lytic murein transglycosylase L domain RD16_RS15450 PF01464 Transglycosylase SLT domain RD16_RS15460 PF00083 Sugar (and other) transporter RD16_RS15460 PF07690 Major Facilitator Superfamily RD16_RS15465 PF00850 Histone deacetylase domain RD16_RS15470 PF03466 LysR substrate binding domain RD16_RS15470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS15480 PF02219 Methylenetetrahydrofolate reductase RD16_RS15485 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RD16_RS15490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD16_RS15490 PF05221 S-adenosyl-L-homocysteine hydrolase RD16_RS15495 PF13439 Glycosyltransferase Family 4 RD16_RS15495 PF00534 Glycosyl transferases group 1 RD16_RS15505 PF02772 S-adenosylmethionine synthetase, central domain RD16_RS15505 PF00438 S-adenosylmethionine synthetase, N-terminal domain RD16_RS15505 PF02773 S-adenosylmethionine synthetase, C-terminal domain RD16_RS15515 PF03279 Bacterial lipid A biosynthesis acyltransferase RD16_RS15520 PF01678 Diaminopimelate epimerase RD16_RS15530 PF02899 Phage integrase, N-terminal SAM-like domain RD16_RS15530 PF00589 Phage integrase family RD16_RS15535 PF07715 TonB-dependent Receptor Plug Domain RD16_RS15535 PF00593 TonB dependent receptor RD16_RS15540 PF03824 High-affinity nickel-transport protein RD16_RS15550 PF01297 Zinc-uptake complex component A periplasmic RD16_RS15555 PF00950 ABC 3 transport family RD16_RS15560 PF00005 ABC transporter RD16_RS15570 PF01475 Ferric uptake regulator family RD16_RS15575 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD16_RS15575 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD16_RS15580 PF01258 Prokaryotic dksA/traR C4-type zinc finger RD16_RS15585 PF00227 Proteasome subunit RD16_RS15590 PF07724 AAA domain (Cdc48 subfamily) RD16_RS15590 PF10431 C-terminal, D2-small domain, of ClpB protein RD16_RS15590 PF00004 ATPase family associated with various cellular activities (AAA) RD16_RS15600 PF01923 Cobalamin adenosyltransferase RD16_RS15615 PF13091 PLD-like domain RD16_RS15620 PF03459 TOBE domain RD16_RS15620 PF00005 ABC transporter RD16_RS15625 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS15635 PF00561 alpha/beta hydrolase fold RD16_RS15680 PF01810 LysE type translocator RD16_RS15690 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS15705 PF01266 FAD dependent oxidoreductase RD16_RS15720 PF13361 UvrD-like helicase C-terminal domain RD16_RS15720 PF00580 UvrD/REP helicase N-terminal domain RD16_RS15745 PF13175 AAA ATPase domain RD16_RS15750 PF01555 DNA methylase RD16_RS15765 PF13356 Arm DNA-binding domain RD16_RS15765 PF00589 Phage integrase family RD16_RS15770 PF06071 Protein of unknown function (DUF933) RD16_RS15770 PF01926 50S ribosome-binding GTPase RD16_RS15780 PF01195 Peptidyl-tRNA hydrolase RD16_RS15785 PF01386 Ribosomal L25p family RD16_RS15785 PF14693 Ribosomal protein TL5, C-terminal domain RD16_RS15790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RD16_RS15790 PF14572 Phosphoribosyl synthetase-associated domain RD16_RS15800 PF08544 GHMP kinases C terminal RD16_RS15800 PF00288 GHMP kinases N terminal domain RD16_RS15805 PF03550 Outer membrane lipoprotein LolB RD16_RS15815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RD16_RS15815 PF06827 Zinc finger found in FPG and IleRS RD16_RS15815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RD16_RS15825 PF01494 FAD binding domain RD16_RS15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS15835 PF03466 LysR substrate binding domain RD16_RS15840 PF04209 homogentisate 1,2-dioxygenase RD16_RS15850 PF00884 Sulfatase RD16_RS15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS15855 PF08521 Two-component sensor kinase N-terminal RD16_RS15855 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS15860 PF00072 Response regulator receiver domain RD16_RS15860 PF00486 Transcriptional regulatory protein, C terminal RD16_RS15865 PF02913 FAD linked oxidases, C-terminal domain RD16_RS15865 PF01565 FAD binding domain RD16_RS15875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD16_RS15875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD16_RS15875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD16_RS15875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD16_RS15880 PF00342 Phosphoglucose isomerase RD16_RS15885 PF13477 Glycosyl transferase 4-like RD16_RS15885 PF00534 Glycosyl transferases group 1 RD16_RS15890 PF00534 Glycosyl transferases group 1 RD16_RS15890 PF13439 Glycosyltransferase Family 4 RD16_RS15895 PF13439 Glycosyltransferase Family 4 RD16_RS15895 PF00534 Glycosyl transferases group 1 RD16_RS15900 PF00733 Asparagine synthase RD16_RS15900 PF13537 Glutamine amidotransferase domain RD16_RS15905 PF00534 Glycosyl transferases group 1 RD16_RS15905 PF13439 Glycosyltransferase Family 4 RD16_RS15910 PF03023 Lipid II flippase MurJ RD16_RS15915 PF01370 NAD dependent epimerase/dehydratase family RD16_RS15920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD16_RS15920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD16_RS15920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD16_RS15925 PF00953 Glycosyl transferase family 4 RD16_RS15930 PF03232 Ubiquinone biosynthesis protein COQ7 RD16_RS15940 PF00303 Thymidylate synthase RD16_RS15945 PF00186 Dihydrofolate reductase RD16_RS15950 PF00392 Bacterial regulatory proteins, gntR family RD16_RS15950 PF00155 Aminotransferase class I and II RD16_RS15955 PF00202 Aminotransferase class-III RD16_RS15960 PF00171 Aldehyde dehydrogenase family RD16_RS15965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS15970 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS15975 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS15985 PF07364 Metallopeptidase family M81 RD16_RS15985 PF07171 MlrC C-terminus RD16_RS15995 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD16_RS16000 PF01730 UreF RD16_RS16005 PF02814 UreE urease accessory protein, N-terminal domain RD16_RS16005 PF05194 UreE urease accessory protein, C-terminal domain RD16_RS16010 PF00449 Urease alpha-subunit, N-terminal domain RD16_RS16010 PF01979 Amidohydrolase family RD16_RS16015 PF00699 Urease beta subunit RD16_RS16020 PF04955 HupE / UreJ protein RD16_RS16025 PF00547 Urease, gamma subunit RD16_RS16030 PF01774 UreD urease accessory protein RD16_RS16035 PF00376 MerR family regulatory protein RD16_RS16035 PF09278 MerR, DNA binding RD16_RS16040 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS16055 PF00392 Bacterial regulatory proteins, gntR family RD16_RS16055 PF07702 UTRA domain RD16_RS16060 PF05034 Methylaspartate ammonia-lyase N-terminus RD16_RS16060 PF07476 Methylaspartate ammonia-lyase C-terminus RD16_RS16065 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS16080 PF04293 SpoVR like protein RD16_RS16085 PF04285 Protein of unknown function (DUF444) RD16_RS16110 PF02515 CoA-transferase family III RD16_RS16115 PF00501 AMP-binding enzyme RD16_RS16115 PF14535 AMP-binding enzyme C-terminal domain RD16_RS16120 PF00440 Bacterial regulatory proteins, tetR family RD16_RS16120 PF08361 MAATS-type transcriptional repressor, C-terminal region RD16_RS16125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS16125 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS16125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS16135 PF02653 Branched-chain amino acid transport system / permease component RD16_RS16140 PF00005 ABC transporter RD16_RS16145 PF00005 ABC transporter RD16_RS16145 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS16155 PF00106 short chain dehydrogenase RD16_RS16160 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS16170 PF02803 Thiolase, C-terminal domain RD16_RS16170 PF00108 Thiolase, N-terminal domain RD16_RS16175 PF01575 MaoC like domain RD16_RS16220 PF00075 RNase H RD16_RS16225 PF08241 Methyltransferase domain RD16_RS16230 PF00753 Metallo-beta-lactamase superfamily RD16_RS16230 PF16123 Hydroxyacylglutathione hydrolase C-terminus RD16_RS16235 PF01464 Transglycosylase SLT domain RD16_RS16235 PF01476 LysM domain RD16_RS16255 PF04391 Protein of unknown function (DUF533) RD16_RS16260 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS16275 PF00486 Transcriptional regulatory protein, C terminal RD16_RS16275 PF00072 Response regulator receiver domain RD16_RS16280 PF02702 Osmosensitive K+ channel His kinase sensor domain RD16_RS16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS16280 PF13493 Domain of unknown function (DUF4118) RD16_RS16290 PF01654 Cytochrome bd terminal oxidase subunit I RD16_RS16295 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RD16_RS16295 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD16_RS16300 PF03775 Septum formation inhibitor MinC, C-terminal domain RD16_RS16300 PF05209 Septum formation inhibitor MinC, N-terminal domain RD16_RS16305 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RD16_RS16310 PF03776 Septum formation topological specificity factor MinE RD16_RS16330 PF12848 ABC transporter RD16_RS16330 PF00005 ABC transporter RD16_RS16340 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS16345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS16350 PF00535 Glycosyl transferase family 2 RD16_RS16355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS16355 PF03466 LysR substrate binding domain RD16_RS16365 PF17760 UvrA interaction domain RD16_RS16365 PF17755 UvrA DNA-binding domain RD16_RS16365 PF00005 ABC transporter RD16_RS16370 PF04715 Anthranilate synthase component I, N terminal region RD16_RS16370 PF00425 chorismate binding enzyme RD16_RS16375 PF01063 Amino-transferase class IV RD16_RS16390 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS16395 PF00501 AMP-binding enzyme RD16_RS16395 PF13193 AMP-binding enzyme C-terminal domain RD16_RS16400 PF07702 UTRA domain RD16_RS16400 PF00392 Bacterial regulatory proteins, gntR family RD16_RS16405 PF00899 ThiF family RD16_RS16410 PF07690 Major Facilitator Superfamily RD16_RS16420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RD16_RS16420 PF01243 Pyridoxamine 5'-phosphate oxidase RD16_RS16425 PF01613 Flavin reductase like domain RD16_RS16435 PF00551 Formyl transferase RD16_RS16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS16440 PF03466 LysR substrate binding domain RD16_RS16445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS16445 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS16445 PF18158 Adaptive response protein AidB N-terminal domain RD16_RS16470 PF00218 Indole-3-glycerol phosphate synthase RD16_RS16475 PF00591 Glycosyl transferase family, a/b domain RD16_RS16475 PF02885 Glycosyl transferase family, helical bundle domain RD16_RS16480 PF00117 Glutamine amidotransferase class-I RD16_RS16485 PF00425 chorismate binding enzyme RD16_RS16485 PF04715 Anthranilate synthase component I, N terminal region RD16_RS16490 PF13419 Haloacid dehalogenase-like hydrolase RD16_RS16495 PF00834 Ribulose-phosphate 3 epimerase family RD16_RS16500 PF04379 ApaG domain RD16_RS16505 PF03562 MltA specific insert domain RD16_RS16505 PF06725 3D domain RD16_RS16510 PF01494 FAD binding domain RD16_RS16515 PF13098 Thioredoxin-like domain RD16_RS16515 PF10411 Disulfide bond isomerase protein N-terminus RD16_RS16520 PF01842 ACT domain RD16_RS16520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD16_RS16520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD16_RS16530 PF01171 PP-loop family RD16_RS16540 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS16540 PF13192 Thioredoxin domain RD16_RS16545 PF13180 PDZ domain RD16_RS16545 PF17820 PDZ domain RD16_RS16550 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS16575 PF00119 ATP synthase A chain RD16_RS16580 PF00137 ATP synthase subunit C RD16_RS16585 PF00430 ATP synthase B/B' CF(0) RD16_RS16590 PF00213 ATP synthase delta (OSCP) subunit RD16_RS16595 PF00306 ATP synthase alpha/beta chain, C terminal domain RD16_RS16595 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD16_RS16595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD16_RS16600 PF00231 ATP synthase RD16_RS16605 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD16_RS16605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD16_RS16610 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RD16_RS16620 PF01208 Uroporphyrinogen decarboxylase (URO-D) RD16_RS16625 PF18074 Primosomal protein N C-terminal domain RD16_RS16625 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RD16_RS16625 PF00271 Helicase conserved C-terminal domain RD16_RS16625 PF17764 3′ DNA-binding domain (3′BD) RD16_RS16625 PF00270 DEAD/DEAH box helicase RD16_RS16630 PF13361 UvrD-like helicase C-terminal domain RD16_RS16630 PF00580 UvrD/REP helicase N-terminal domain RD16_RS16640 PF07687 Peptidase dimerisation domain RD16_RS16640 PF01546 Peptidase family M20/M25/M40 RD16_RS16650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS16650 PF00005 ABC transporter RD16_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS16655 PF12911 N-terminal TM domain of oligopeptide transport permease C RD16_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS16680 PF01256 Carbohydrate kinase RD16_RS16685 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS16690 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS16705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS16705 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS16705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS16710 PF02515 CoA-transferase family III RD16_RS16715 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RD16_RS16715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD16_RS16715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD16_RS16745 PF07731 Multicopper oxidase RD16_RS16745 PF00394 Multicopper oxidase RD16_RS16745 PF07732 Multicopper oxidase RD16_RS16750 PF05275 Copper resistance protein B precursor (CopB) RD16_RS16755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD16_RS16755 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS16755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD16_RS16770 PF01614 Bacterial transcriptional regulator RD16_RS16770 PF09339 IclR helix-turn-helix domain RD16_RS16775 PF05995 Cysteine dioxygenase type I RD16_RS16780 PF01425 Amidase RD16_RS16785 PF13458 Periplasmic binding protein RD16_RS16795 PF04972 BON domain RD16_RS16795 PF00691 OmpA family RD16_RS16800 PF01329 Pterin 4 alpha carbinolamine dehydratase RD16_RS16810 PF00483 Nucleotidyl transferase RD16_RS16815 PF01636 Phosphotransferase enzyme family RD16_RS16820 PF04453 LPS transport system D RD16_RS16825 PF09312 SurA N-terminal domain RD16_RS16825 PF00639 PPIC-type PPIASE domain RD16_RS16830 PF00398 Ribosomal RNA adenine dimethylase RD16_RS16835 PF02595 Glycerate kinase family RD16_RS16840 PF02887 Pyruvate kinase, alpha/beta domain RD16_RS16840 PF00224 Pyruvate kinase, barrel domain RD16_RS16845 PF07670 Nucleoside recognition RD16_RS16850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD16_RS16850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD16_RS16850 PF02770 Acyl-CoA dehydrogenase, middle domain RD16_RS16850 PF09317 Domain of unknown function (DUF1974) RD16_RS16865 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS16870 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS16875 PF00005 ABC transporter RD16_RS16880 PF01032 FecCD transport family RD16_RS16890 PF00691 OmpA family RD16_RS16895 PF04052 TolB amino-terminal domain RD16_RS16895 PF07676 WD40-like Beta Propeller Repeat RD16_RS16905 PF02472 Biopolymer transport protein ExbD/TolR RD16_RS16910 PF01618 MotA/TolQ/ExbB proton channel family RD16_RS16915 PF03061 Thioesterase superfamily RD16_RS16920 PF04073 Aminoacyl-tRNA editing domain RD16_RS16920 PF03129 Anticodon binding domain RD16_RS16920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD16_RS16925 PF00293 NUDIX domain RD16_RS16930 PF00486 Transcriptional regulatory protein, C terminal RD16_RS16930 PF00072 Response regulator receiver domain RD16_RS16940 PF02586 SOS response associated peptidase (SRAP) RD16_RS17005 PF06791 Prophage tail length tape measure protein RD16_RS17155 PF00270 DEAD/DEAH box helicase RD16_RS17155 PF00271 Helicase conserved C-terminal domain RD16_RS17170 PF01063 Amino-transferase class IV RD16_RS17185 PF00561 alpha/beta hydrolase fold RD16_RS17190 PF13181 Tetratricopeptide repeat RD16_RS17190 PF01435 Peptidase family M48 RD16_RS17195 PF00483 Nucleotidyl transferase RD16_RS17205 PF13609 Gram-negative porin RD16_RS17235 PF05195 Aminopeptidase P, N-terminal domain RD16_RS17235 PF00557 Metallopeptidase family M24 RD16_RS17245 PF01494 FAD binding domain RD16_RS17250 PF01207 Dihydrouridine synthase (Dus) RD16_RS17255 PF02954 Bacterial regulatory protein, Fis family RD16_RS17260 PF02142 MGS-like domain RD16_RS17260 PF01808 AICARFT/IMPCHase bienzyme RD16_RS17265 PF02075 Crossover junction endodeoxyribonuclease RuvC RD16_RS17270 PF01330 RuvA N terminal domain RD16_RS17270 PF07499 RuvA, C-terminal domain RD16_RS17275 PF01370 NAD dependent epimerase/dehydratase family RD16_RS17280 PF00291 Pyridoxal-phosphate dependent enzyme RD16_RS17285 PF05491 RuvB C-terminal winged helix domain RD16_RS17285 PF17864 RuvB AAA lid domain RD16_RS17285 PF05496 Holliday junction DNA helicase RuvB P-loop domain RD16_RS17290 PF16124 RecQ zinc-binding RD16_RS17290 PF00271 Helicase conserved C-terminal domain RD16_RS17290 PF00270 DEAD/DEAH box helicase RD16_RS17290 PF00570 HRDC domain RD16_RS17290 PF09382 RQC domain RD16_RS17305 PF00484 Carbonic anhydrase RD16_RS17310 PF01425 Amidase RD16_RS17315 PF13458 Periplasmic binding protein RD16_RS17320 PF02653 Branched-chain amino acid transport system / permease component RD16_RS17325 PF02653 Branched-chain amino acid transport system / permease component RD16_RS17330 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS17330 PF00005 ABC transporter RD16_RS17335 PF00005 ABC transporter RD16_RS17340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RD16_RS17340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD16_RS17350 PF03180 NLPA lipoprotein RD16_RS17365 PF00994 Probable molybdopterin binding domain RD16_RS17365 PF18146 Damage-inducible protein CinA KH domain RD16_RS17365 PF02464 Competence-damaged protein RD16_RS17370 PF09339 IclR helix-turn-helix domain RD16_RS17370 PF01614 Bacterial transcriptional regulator RD16_RS17375 PF18807 Tripartite Tc toxins repeat RD16_RS17375 PF05785 Rho-activating domain of cytotoxic necrotizing factor RD16_RS17380 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS17390 PF01180 Dihydroorotate dehydrogenase RD16_RS17395 PF04376 Arginine-tRNA-protein transferase, N terminus RD16_RS17395 PF04377 Arginine-tRNA-protein transferase, C terminus RD16_RS17405 PF03466 LysR substrate binding domain RD16_RS17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS17445 PF00392 Bacterial regulatory proteins, gntR family RD16_RS17445 PF07729 FCD domain RD16_RS17450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD16_RS17450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD16_RS17450 PF00205 Thiamine pyrophosphate enzyme, central domain RD16_RS17455 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS17460 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD16_RS17465 PF00390 Malic enzyme, N-terminal domain RD16_RS17465 PF03949 Malic enzyme, NAD binding domain RD16_RS17465 PF01515 Phosphate acetyl/butaryl transferase RD16_RS17475 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS17480 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS17485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS17485 PF00005 ABC transporter RD16_RS17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS17500 PF03466 LysR substrate binding domain RD16_RS17515 PF01022 Bacterial regulatory protein, arsR family RD16_RS17530 PF03594 Benzoate membrane transport protein RD16_RS17535 PF00037 4Fe-4S binding domain RD16_RS17540 PF01467 Cytidylyltransferase-like RD16_RS17550 PF00448 SRP54-type protein, GTPase domain RD16_RS17550 PF02881 SRP54-type protein, helical bundle domain RD16_RS17565 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS17570 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS17575 PF00005 ABC transporter RD16_RS17585 PF00005 ABC transporter RD16_RS17605 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD16_RS17605 PF00925 GTP cyclohydrolase II RD16_RS17610 PF00885 6,7-dimethyl-8-ribityllumazine synthase RD16_RS17615 PF01029 NusB family RD16_RS17620 PF00586 AIR synthase related protein, N-terminal domain RD16_RS17620 PF02769 AIR synthase related protein, C-terminal domain RD16_RS17625 PF04608 Phosphatidylglycerophosphatase A RD16_RS17630 PF00994 Probable molybdopterin binding domain RD16_RS17630 PF02464 Competence-damaged protein RD16_RS17630 PF18146 Damage-inducible protein CinA KH domain RD16_RS17635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RD16_RS17640 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS17645 PF01219 Prokaryotic diacylglycerol kinase RD16_RS17650 PF03631 Virulence factor BrkB RD16_RS17655 PF03797 Autotransporter beta-domain RD16_RS17655 PF03212 Pertactin RD16_RS17660 PF00118 TCP-1/cpn60 chaperonin family RD16_RS17665 PF00166 Chaperonin 10 Kd subunit RD16_RS17685 PF00890 FAD binding domain RD16_RS17695 PF03466 LysR substrate binding domain RD16_RS17695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS17700 PF00890 FAD binding domain RD16_RS17715 PF00990 Diguanylate cyclase, GGDEF domain RD16_RS17720 PF00072 Response regulator receiver domain RD16_RS17755 PF03781 Sulfatase-modifying factor enzyme 1 RD16_RS17755 PF12867 DinB superfamily RD16_RS17760 PF10017 Histidine-specific methyltransferase, SAM-dependent RD16_RS17770 PF13396 Phospholipase_D-nuclease N-terminal RD16_RS17770 PF13091 PLD-like domain RD16_RS17790 PF01645 Conserved region in glutamate synthase RD16_RS17795 PF04143 Sulphur transport RD16_RS17800 PF03547 Membrane transport protein RD16_RS17805 PF13673 Acetyltransferase (GNAT) domain RD16_RS17825 PF00575 S1 RNA binding domain RD16_RS17825 PF00773 RNB domain RD16_RS17825 PF17876 Cold shock domain RD16_RS17825 PF08206 Ribonuclease B OB domain RD16_RS17825 PF08461 Ribonuclease R winged-helix domain RD16_RS17830 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD16_RS17830 PF00588 SpoU rRNA Methylase family RD16_RS17835 PF01053 Cys/Met metabolism PLP-dependent enzyme RD16_RS17840 PF18331 PKHD-type hydroxylase C-terminal domain RD16_RS17840 PF13640 2OG-Fe(II) oxygenase superfamily RD16_RS17845 PF00216 Bacterial DNA-binding protein RD16_RS17860 PF01618 MotA/TolQ/ExbB proton channel family RD16_RS17865 PF02472 Biopolymer transport protein ExbD/TolR RD16_RS17870 PF00486 Transcriptional regulatory protein, C terminal RD16_RS17870 PF00072 Response regulator receiver domain RD16_RS17875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS17875 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS17875 PF08521 Two-component sensor kinase N-terminal RD16_RS17880 PF02705 K+ potassium transporter RD16_RS17885 PF00764 Arginosuccinate synthase RD16_RS17890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD16_RS17890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD16_RS17895 PF00202 Aminotransferase class-III RD16_RS17905 PF03466 LysR substrate binding domain RD16_RS17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS17915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD16_RS17915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD16_RS17920 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS17935 PF07729 FCD domain RD16_RS17935 PF00392 Bacterial regulatory proteins, gntR family RD16_RS17945 PF07690 Major Facilitator Superfamily RD16_RS17955 PF02627 Carboxymuconolactone decarboxylase family RD16_RS17960 PF00578 AhpC/TSA family RD16_RS17965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS17965 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS17965 PF00672 HAMP domain RD16_RS17975 PF00072 Response regulator receiver domain RD16_RS17975 PF00486 Transcriptional regulatory protein, C terminal RD16_RS17980 PF00814 Glycoprotease family RD16_RS17985 PF03167 Uracil DNA glycosylase superfamily RD16_RS17990 PF07690 Major Facilitator Superfamily RD16_RS17995 PF06470 SMC proteins Flexible Hinge Domain RD16_RS17995 PF02463 RecF/RecN/SMC N terminal domain RD16_RS18005 PF12826 Helix-hairpin-helix motif RD16_RS18005 PF00533 BRCA1 C Terminus (BRCT) domain RD16_RS18005 PF01653 NAD-dependent DNA ligase adenylation domain RD16_RS18005 PF03120 NAD-dependent DNA ligase OB-fold domain RD16_RS18005 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RD16_RS18020 PF04279 Intracellular septation protein A RD16_RS18025 PF01641 SelR domain RD16_RS18030 PF00005 ABC transporter RD16_RS18035 PF02361 Cobalt transport protein RD16_RS18040 PF02632 BioY family RD16_RS18055 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS18055 PF00005 ABC transporter RD16_RS18060 PF01063 Amino-transferase class IV RD16_RS18075 PF02653 Branched-chain amino acid transport system / permease component RD16_RS18085 PF00005 ABC transporter RD16_RS18090 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD16_RS18090 PF00005 ABC transporter RD16_RS18095 PF00633 Helix-hairpin-helix motif RD16_RS18095 PF10576 Iron-sulfur binding domain of endonuclease III RD16_RS18095 PF00730 HhH-GPD superfamily base excision DNA repair protein RD16_RS18100 PF04060 Putative Fe-S cluster RD16_RS18110 PF00175 Oxidoreductase NAD-binding domain RD16_RS18110 PF00970 Oxidoreductase FAD-binding domain RD16_RS18115 PF11953 Domain of unknown function (DUF3470) RD16_RS18115 PF00037 4Fe-4S binding domain RD16_RS18120 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RD16_RS18120 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RD16_RS18125 PF01042 Endoribonuclease L-PSP RD16_RS18135 PF06167 Glucose-regulated metallo-peptidase M90 RD16_RS18140 PF04607 Region found in RelA / SpoT proteins RD16_RS18140 PF02824 TGS domain RD16_RS18140 PF13291 ACT domain RD16_RS18145 PF07687 Peptidase dimerisation domain RD16_RS18145 PF01546 Peptidase family M20/M25/M40 RD16_RS18150 PF00291 Pyridoxal-phosphate dependent enzyme RD16_RS18155 PF00290 Tryptophan synthase alpha chain RD16_RS18160 PF17848 Acetyl-coA carboxylase zinc finger domain RD16_RS18160 PF01039 Carboxyl transferase domain RD16_RS18165 PF09411 Lipid A 3-O-deacylase (PagL) RD16_RS18175 PF02574 Homocysteine S-methyltransferase RD16_RS18175 PF00809 Pterin binding enzyme RD16_RS18175 PF02965 Vitamin B12 dependent methionine synthase, activation domain RD16_RS18175 PF02310 B12 binding domain RD16_RS18175 PF02607 B12 binding domain RD16_RS18180 PF00593 TonB dependent receptor RD16_RS18180 PF07715 TonB-dependent Receptor Plug Domain RD16_RS18185 PF01497 Periplasmic binding protein RD16_RS18190 PF05690 Thiazole biosynthesis protein ThiG RD16_RS18195 PF08543 Phosphomethylpyrimidine kinase RD16_RS18210 PF02321 Outer membrane efflux protein RD16_RS18215 PF01467 Cytidylyltransferase-like RD16_RS18225 PF01594 AI-2E family transporter RD16_RS18235 PF07885 Ion channel RD16_RS18235 PF02254 TrkA-N domain RD16_RS18245 PF00164 Ribosomal protein S12/S23 RD16_RS18250 PF00177 Ribosomal protein S7p/S5e RD16_RS18255 PF03144 Elongation factor Tu domain 2 RD16_RS18255 PF00009 Elongation factor Tu GTP binding domain RD16_RS18255 PF00679 Elongation factor G C-terminus RD16_RS18255 PF03764 Elongation factor G, domain IV RD16_RS18255 PF14492 Elongation Factor G, domain II RD16_RS18260 PF03143 Elongation factor Tu C-terminal domain RD16_RS18260 PF03144 Elongation factor Tu domain 2 RD16_RS18260 PF00009 Elongation factor Tu GTP binding domain RD16_RS18265 PF00338 Ribosomal protein S10p/S20e RD16_RS18270 PF00297 Ribosomal protein L3 RD16_RS18275 PF00573 Ribosomal protein L4/L1 family RD16_RS18280 PF00276 Ribosomal protein L23 RD16_RS18285 PF00181 Ribosomal Proteins L2, RNA binding domain RD16_RS18285 PF03947 Ribosomal Proteins L2, C-terminal domain RD16_RS18290 PF00203 Ribosomal protein S19 RD16_RS18295 PF00237 Ribosomal protein L22p/L17e RD16_RS18300 PF00189 Ribosomal protein S3, C-terminal domain RD16_RS18300 PF07650 KH domain RD16_RS18305 PF00252 Ribosomal protein L16p/L10e RD16_RS18310 PF00831 Ribosomal L29 protein RD16_RS18315 PF00366 Ribosomal protein S17 RD16_RS18325 PF00171 Aldehyde dehydrogenase family RD16_RS18335 PF00238 Ribosomal protein L14p/L23e RD16_RS18340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RD16_RS18345 PF00281 Ribosomal protein L5 RD16_RS18345 PF00673 ribosomal L5P family C-terminus RD16_RS18350 PF00253 Ribosomal protein S14p/S29e RD16_RS18355 PF00410 Ribosomal protein S8 RD16_RS18360 PF00347 Ribosomal protein L6 RD16_RS18365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RD16_RS18370 PF00333 Ribosomal protein S5, N-terminal domain RD16_RS18370 PF03719 Ribosomal protein S5, C-terminal domain RD16_RS18375 PF00327 Ribosomal protein L30p/L7e RD16_RS18380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RD16_RS18385 PF00344 SecY translocase RD16_RS18390 PF01176 Translation initiation factor 1A / IF-1 RD16_RS18395 PF00444 Ribosomal protein L36 RD16_RS18400 PF00416 Ribosomal protein S13/S18 RD16_RS18405 PF00411 Ribosomal protein S11 RD16_RS18410 PF01479 S4 domain RD16_RS18410 PF00163 Ribosomal protein S4/S9 N-terminal domain RD16_RS18415 PF01000 RNA polymerase Rpb3/RpoA insert domain RD16_RS18415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RD16_RS18415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RD16_RS18420 PF01196 Ribosomal protein L17 RD16_RS18430 PF03091 CutA1 divalent ion tolerance protein RD16_RS18435 PF11412 Disulphide bond corrector protein DsbC RD16_RS18435 PF02683 Cytochrome C biogenesis protein transmembrane region RD16_RS18440 PF00892 EamA-like transporter family RD16_RS18445 PF00490 Delta-aminolevulinic acid dehydratase RD16_RS18450 PF01926 50S ribosome-binding GTPase RD16_RS18455 PF00034 Cytochrome c RD16_RS18460 PF05140 ResB-like family RD16_RS18465 PF01578 Cytochrome C assembly protein RD16_RS18470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RD16_RS18470 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD16_RS18475 PF01491 Frataxin-like domain RD16_RS18480 PF17092 Penicillin-binding protein OB-like domain RD16_RS18480 PF00912 Transglycosylase RD16_RS18480 PF00905 Penicillin binding protein transpeptidase domain RD16_RS18485 PF01202 Shikimate kinase RD16_RS18490 PF01761 3-dehydroquinate synthase RD16_RS18495 PF01966 HD domain RD16_RS18495 PF13286 Phosphohydrolase-associated domain RD16_RS18500 PF00043 Glutathione S-transferase, C-terminal domain RD16_RS18500 PF13417 Glutathione S-transferase, N-terminal domain RD16_RS18505 PF17760 UvrA interaction domain RD16_RS18505 PF17755 UvrA DNA-binding domain RD16_RS18510 PF07690 Major Facilitator Superfamily RD16_RS18515 PF00436 Single-strand binding protein family RD16_RS18520 PF00593 TonB dependent receptor RD16_RS18520 PF07715 TonB-dependent Receptor Plug Domain RD16_RS18530 PF03328 HpcH/HpaI aldolase/citrate lyase family RD16_RS18540 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS18550 PF03466 LysR substrate binding domain RD16_RS18555 PF01979 Amidohydrolase family RD16_RS18560 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS18565 PF13439 Glycosyltransferase Family 4 RD16_RS18565 PF00534 Glycosyl transferases group 1 RD16_RS18575 PF03466 LysR substrate binding domain RD16_RS18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS18585 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS18590 PF00005 ABC transporter RD16_RS18610 PF01274 Malate synthase RD16_RS18615 PF00392 Bacterial regulatory proteins, gntR family RD16_RS18615 PF07729 FCD domain RD16_RS18630 PF01040 UbiA prenyltransferase family RD16_RS18635 PF00155 Aminotransferase class I and II RD16_RS18640 PF13185 GAF domain RD16_RS18645 PF00701 Dihydrodipicolinate synthetase family RD16_RS18655 PF04972 BON domain RD16_RS18655 PF01476 LysM domain RD16_RS18660 PF05690 Thiazole biosynthesis protein ThiG RD16_RS18660 PF02597 ThiS family RD16_RS18665 PF00561 alpha/beta hydrolase fold RD16_RS18670 PF02390 Putative methyltransferase RD16_RS18685 PF00682 HMGL-like RD16_RS18690 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS18705 PF07702 UTRA domain RD16_RS18705 PF00392 Bacterial regulatory proteins, gntR family RD16_RS18710 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS18720 PF00392 Bacterial regulatory proteins, gntR family RD16_RS18720 PF07702 UTRA domain RD16_RS18725 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS18735 PF00005 ABC transporter RD16_RS18740 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS18745 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS18750 PF02801 Beta-ketoacyl synthase, C-terminal domain RD16_RS18750 PF16197 Ketoacyl-synthetase C-terminal extension RD16_RS18750 PF08990 Erythronolide synthase docking RD16_RS18750 PF08659 KR domain RD16_RS18750 PF00550 Phosphopantetheine attachment site RD16_RS18750 PF08240 Alcohol dehydrogenase GroES-like domain RD16_RS18750 PF00698 Acyl transferase domain RD16_RS18750 PF14765 Polyketide synthase dehydratase RD16_RS18750 PF00109 Beta-ketoacyl synthase, N-terminal domain RD16_RS18755 PF02515 CoA-transferase family III RD16_RS18760 PF00440 Bacterial regulatory proteins, tetR family RD16_RS18765 PF00293 NUDIX domain RD16_RS18765 PF09297 NADH pyrophosphatase zinc ribbon domain RD16_RS18770 PF00175 Oxidoreductase NAD-binding domain RD16_RS18770 PF00111 2Fe-2S iron-sulfur cluster binding domain RD16_RS18770 PF00970 Oxidoreductase FAD-binding domain RD16_RS18775 PF01425 Amidase RD16_RS18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD16_RS18785 PF03466 LysR substrate binding domain RD16_RS18790 PF13458 Periplasmic binding protein RD16_RS18800 PF00005 ABC transporter RD16_RS18810 PF02653 Branched-chain amino acid transport system / permease component RD16_RS18820 PF00355 Rieske [2Fe-2S] domain RD16_RS18835 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RD16_RS18835 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RD16_RS18850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD16_RS18850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD16_RS18850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD16_RS18855 PF07690 Major Facilitator Superfamily RD16_RS18860 PF14602 Hexapeptide repeat of succinyl-transferase RD16_RS18860 PF12804 MobA-like NTP transferase domain RD16_RS18860 PF00132 Bacterial transferase hexapeptide (six repeats) RD16_RS18880 PF02630 SCO1/SenC RD16_RS18885 PF01040 UbiA prenyltransferase family RD16_RS18890 PF02628 Cytochrome oxidase assembly protein RD16_RS18910 PF00510 Cytochrome c oxidase subunit III RD16_RS18925 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD16_RS18930 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD16_RS18930 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RD16_RS18940 PF00999 Sodium/hydrogen exchanger family RD16_RS18945 PF00149 Calcineurin-like phosphoesterase RD16_RS18950 PF00140 Sigma-70 factor, region 1.2 RD16_RS18950 PF04542 Sigma-70 region 2 RD16_RS18950 PF04545 Sigma-70, region 4 RD16_RS18960 PF00756 Putative esterase RD16_RS18965 PF00107 Zinc-binding dehydrogenase RD16_RS18965 PF08240 Alcohol dehydrogenase GroES-like domain RD16_RS18975 PF00310 Glutamine amidotransferases class-II RD16_RS18975 PF01493 GXGXG motif RD16_RS18975 PF01645 Conserved region in glutamate synthase RD16_RS18975 PF04898 Glutamate synthase central domain RD16_RS18980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD16_RS18980 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD16_RS18985 PF03922 OmpW family RD16_RS18990 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS18995 PF00005 ABC transporter RD16_RS19000 PF02405 Permease MlaE RD16_RS19005 PF02470 MlaD protein RD16_RS19010 PF04333 MlaA lipoprotein RD16_RS19025 PF01061 ABC-2 type transporter RD16_RS19035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD16_RS19040 PF01634 ATP phosphoribosyltransferase RD16_RS19045 PF00815 Histidinol dehydrogenase RD16_RS19050 PF00155 Aminotransferase class I and II RD16_RS19055 PF00475 Imidazoleglycerol-phosphate dehydratase RD16_RS19060 PF00117 Glutamine amidotransferase class-I RD16_RS19065 PF00977 Histidine biosynthesis protein RD16_RS19070 PF00977 Histidine biosynthesis protein RD16_RS19075 PF01502 Phosphoribosyl-AMP cyclohydrolase RD16_RS19080 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RD16_RS19085 PF01230 HIT domain RD16_RS19090 PF02416 mttA/Hcf106 family RD16_RS19095 PF02416 mttA/Hcf106 family RD16_RS19100 PF00902 Sec-independent protein translocase protein (TatC) RD16_RS19110 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS19115 PF02917 Pertussis toxin, subunit 1 RD16_RS19120 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD16_RS19120 PF03440 Aerolysin/Pertussis toxin (APT) domain RD16_RS19125 PF09275 Pertussis toxin S4 subunit RD16_RS19130 PF09276 Pertussis toxin S5 subunit RD16_RS19135 PF03440 Aerolysin/Pertussis toxin (APT) domain RD16_RS19135 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD16_RS19140 PF04956 TrbC/VIRB2 family RD16_RS19145 PF05101 Type IV secretory pathway, VirB3-like protein RD16_RS19150 PF03135 CagE, TrbE, VirB family, component of type IV transporter system RD16_RS19155 PF04610 TrbL/VirB6 plasmid conjugal transfer protein RD16_RS19165 PF04335 VirB8 protein RD16_RS19170 PF03524 Conjugal transfer protein RD16_RS19175 PF03743 Bacterial conjugation TrbI-like protein RD16_RS19180 PF00437 Type II/IV secretion system protein RD16_RS19190 PF00892 EamA-like transporter family RD16_RS19210 PF10396 GTP-binding protein TrmE N-terminus RD16_RS19210 PF01926 50S ribosome-binding GTPase RD16_RS19210 PF12631 MnmE helical domain RD16_RS19215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS19220 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS19225 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS19225 PF12911 N-terminal TM domain of oligopeptide transport permease C RD16_RS19230 PF00005 ABC transporter RD16_RS19230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS19240 PF01960 ArgJ family RD16_RS19250 PF00293 NUDIX domain RD16_RS19265 PF02321 Outer membrane efflux protein RD16_RS19270 PF00873 AcrB/AcrD/AcrF family RD16_RS19275 PF00873 AcrB/AcrD/AcrF family RD16_RS19280 PF13533 Biotin-lipoyl like RD16_RS19285 PF07072 Cell division protein RD16_RS19290 PF01121 Dephospho-CoA kinase RD16_RS19295 PF06750 Bacterial Peptidase A24 N-terminal domain RD16_RS19295 PF01478 Type IV leader peptidase family RD16_RS19310 PF02569 Pantoate-beta-alanine ligase RD16_RS19315 PF02616 Segregation and condensation protein ScpA RD16_RS19325 PF07690 Major Facilitator Superfamily RD16_RS19330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD16_RS19330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD16_RS19340 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS19345 PF00005 ABC transporter RD16_RS19350 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS19355 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS19360 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD16_RS19365 PF00005 ABC transporter RD16_RS19370 PF18075 FtsX extracellular domain RD16_RS19375 PF03975 CheD chemotactic sensory transduction RD16_RS19385 PF10576 Iron-sulfur binding domain of endonuclease III RD16_RS19385 PF00633 Helix-hairpin-helix motif RD16_RS19385 PF00730 HhH-GPD superfamily base excision DNA repair protein RD16_RS19385 PF14815 NUDIX domain RD16_RS19395 PF08241 Methyltransferase domain RD16_RS19405 PF02515 CoA-transferase family III RD16_RS19410 PF02515 CoA-transferase family III RD16_RS19420 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS19425 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS19430 PF00881 Nitroreductase family RD16_RS19440 PF00682 HMGL-like RD16_RS19445 PF00378 Enoyl-CoA hydratase/isomerase RD16_RS19450 PF02515 CoA-transferase family III RD16_RS19455 PF03401 Tripartite tricarboxylate transporter family receptor RD16_RS19465 PF00199 Catalase RD16_RS19465 PF06628 Catalase-related immune-responsive RD16_RS19470 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS19475 PF00005 ABC transporter RD16_RS19485 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD16_RS19490 PF07687 Peptidase dimerisation domain RD16_RS19490 PF01546 Peptidase family M20/M25/M40 RD16_RS19495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS19495 PF00005 ABC transporter RD16_RS19500 PF00005 ABC transporter RD16_RS19500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD16_RS19505 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS19505 PF12911 N-terminal TM domain of oligopeptide transport permease C RD16_RS19510 PF00528 Binding-protein-dependent transport system inner membrane component RD16_RS19515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD16_RS19520 PF01926 50S ribosome-binding GTPase RD16_RS19520 PF10396 GTP-binding protein TrmE N-terminus RD16_RS19520 PF12631 MnmE helical domain RD16_RS19530 PF00486 Transcriptional regulatory protein, C terminal RD16_RS19530 PF00072 Response regulator receiver domain RD16_RS19535 PF00512 His Kinase A (phospho-acceptor) domain RD16_RS19535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD16_RS19550 PF01970 Tripartite tricarboxylate transporter TctA family RD16_RS19555 PF00155 Aminotransferase class I and II RD16_RS19560 PF00313 'Cold-shock' DNA-binding domain