locus-tag class description WU08_RS00005 PF13932 GidA associated domain WU08_RS00005 PF01134 Glucose inhibited division protein A WU08_RS00010 PF02527 rRNA small subunit methyltransferase G WU08_RS00015 PF13614 AAA domain WU08_RS00025 PF02195 ParB-like nuclease domain WU08_RS00025 PF17762 HTH domain found in ParB protein WU08_RS00030 PF00710 Asparaginase, N-terminal WU08_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain WU08_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain WU08_RS00035 PF00710 Asparaginase, N-terminal WU08_RS00055 PF00009 Elongation factor Tu GTP binding domain WU08_RS00055 PF03144 Elongation factor Tu domain 2 WU08_RS00055 PF03143 Elongation factor Tu C-terminal domain WU08_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WU08_RS00070 PF02357 Transcription termination factor nusG WU08_RS00070 PF00467 KOW motif WU08_RS00075 PF00298 Ribosomal protein L11, RNA binding domain WU08_RS00075 PF03946 Ribosomal protein L11, N-terminal domain WU08_RS00080 PF00687 Ribosomal protein L1p/L10e family WU08_RS00085 PF00466 Ribosomal protein L10 WU08_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain WU08_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain WU08_RS00095 PF04563 RNA polymerase beta subunit WU08_RS00095 PF04560 RNA polymerase Rpb2, domain 7 WU08_RS00095 PF00562 RNA polymerase Rpb2, domain 6 WU08_RS00095 PF10385 RNA polymerase beta subunit external 1 domain WU08_RS00095 PF04565 RNA polymerase Rpb2, domain 3 WU08_RS00095 PF04561 RNA polymerase Rpb2, domain 2 WU08_RS00100 PF04998 RNA polymerase Rpb1, domain 5 WU08_RS00100 PF00623 RNA polymerase Rpb1, domain 2 WU08_RS00100 PF04983 RNA polymerase Rpb1, domain 3 WU08_RS00100 PF05000 RNA polymerase Rpb1, domain 4 WU08_RS00100 PF04997 RNA polymerase Rpb1, domain 1 WU08_RS00130 PF00486 Transcriptional regulatory protein, C terminal WU08_RS00130 PF00072 Response regulator receiver domain WU08_RS00140 PF02515 CoA-transferase family III WU08_RS00155 PF01575 MaoC like domain WU08_RS00160 PF03466 LysR substrate binding domain WU08_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS00165 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit WU08_RS00190 PF05746 DALR anticodon binding domain WU08_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit WU08_RS00200 PF01553 Acyltransferase WU08_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU08_RS00215 PF01327 Polypeptide deformylase WU08_RS00250 PF02615 Malate/L-lactate dehydrogenase WU08_RS00255 PF00561 alpha/beta hydrolase fold WU08_RS00260 PF07021 Methionine biosynthesis protein MetW WU08_RS00260 PF00561 alpha/beta hydrolase fold WU08_RS00275 PF07690 Major Facilitator Superfamily WU08_RS00285 PF01177 Asp/Glu/Hydantoin racemase WU08_RS00290 PF00005 ABC transporter WU08_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS00340 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS00355 PF00175 Oxidoreductase NAD-binding domain WU08_RS00355 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS00355 PF00970 Oxidoreductase FAD-binding domain WU08_RS00360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS00370 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS00400 PF00183 Hsp90 protein WU08_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS00405 PF00043 Glutathione S-transferase, C-terminal domain WU08_RS00405 PF13417 Glutathione S-transferase, N-terminal domain WU08_RS00410 PF01510 N-acetylmuramoyl-L-alanine amidase WU08_RS00420 PF01578 Cytochrome C assembly protein WU08_RS00425 PF02881 SRP54-type protein, helical bundle domain WU08_RS00425 PF02978 Signal peptide binding domain WU08_RS00425 PF00448 SRP54-type protein, GTPase domain WU08_RS00440 PF02719 Polysaccharide biosynthesis protein WU08_RS00450 PF10997 Alternate to MurJ WU08_RS00455 PF00534 Glycosyl transferases group 1 WU08_RS00455 PF00862 Sucrose synthase WU08_RS00460 PF02397 Bacterial sugar transferase WU08_RS00465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WU08_RS00475 PF02350 UDP-N-acetylglucosamine 2-epimerase WU08_RS00480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WU08_RS00485 PF00132 Bacterial transferase hexapeptide (six repeats) WU08_RS00490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WU08_RS00490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WU08_RS00495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WU08_RS00500 PF00534 Glycosyl transferases group 1 WU08_RS00500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) WU08_RS00510 PF03309 Type III pantothenate kinase WU08_RS00520 PF02405 Permease MlaE WU08_RS00525 PF00005 ABC transporter WU08_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase WU08_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain WU08_RS00550 PF01063 Amino-transferase class IV WU08_RS00555 PF04359 Protein of unknown function (DUF493) WU08_RS00560 PF03099 Biotin/lipoate A/B protein ligase family WU08_RS00565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WU08_RS00565 PF04055 Radical SAM superfamily WU08_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase WU08_RS00575 PF04321 RmlD substrate binding domain WU08_RS00580 PF16363 GDP-mannose 4,6 dehydratase WU08_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme WU08_RS00600 PF00085 Thioredoxin WU08_RS00600 PF01323 DSBA-like thioredoxin domain WU08_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain WU08_RS00610 PF05746 DALR anticodon binding domain WU08_RS00610 PF00750 tRNA synthetases class I (R) WU08_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS00640 PF13416 Bacterial extracellular solute-binding protein WU08_RS00645 PF17912 MalK OB fold domain WU08_RS00645 PF00005 ABC transporter WU08_RS00650 PF00149 Calcineurin-like phosphoesterase WU08_RS00660 PF12857 TOBE-like domain WU08_RS00660 PF00005 ABC transporter WU08_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS00680 PF00356 Bacterial regulatory proteins, lacI family WU08_RS00690 PF01425 Amidase WU08_RS00695 PF08502 LeuA allosteric (dimerisation) domain WU08_RS00695 PF00682 HMGL-like WU08_RS00705 PF04963 Sigma-54 factor, core binding domain WU08_RS00705 PF00309 Sigma-54 factor, Activator interacting domain (AID) WU08_RS00705 PF04552 Sigma-54, DNA binding domain WU08_RS00715 PF03466 LysR substrate binding domain WU08_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS00730 PF13609 Gram-negative porin WU08_RS00735 PF00585 C-terminal regulatory domain of Threonine dehydratase WU08_RS00735 PF00291 Pyridoxal-phosphate dependent enzyme WU08_RS00750 PF00392 Bacterial regulatory proteins, gntR family WU08_RS00750 PF07729 FCD domain WU08_RS00755 PF02515 CoA-transferase family III WU08_RS00765 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS00775 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS00785 PF03746 LamB/YcsF family WU08_RS00790 PF02626 Carboxyltransferase domain, subdomain A and B WU08_RS00795 PF02682 Carboxyltransferase domain, subdomain C and D WU08_RS00805 PF03466 LysR substrate binding domain WU08_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS00810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU08_RS00810 PF01842 ACT domain WU08_RS00810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU08_RS00820 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS00820 PF00672 HAMP domain WU08_RS00825 PF00072 Response regulator receiver domain WU08_RS00825 PF00486 Transcriptional regulatory protein, C terminal WU08_RS00830 PF00989 PAS fold WU08_RS00830 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS00830 PF11808 Phosphate regulon sensor protein PhoR WU08_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS00835 PF00486 Transcriptional regulatory protein, C terminal WU08_RS00835 PF00072 Response regulator receiver domain WU08_RS00840 PF01209 ubiE/COQ5 methyltransferase family WU08_RS00855 PF03109 ABC1 family WU08_RS00870 PF00005 ABC transporter WU08_RS00870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS00875 PF04536 TPM domain WU08_RS00885 PF00271 Helicase conserved C-terminal domain WU08_RS00885 PF00270 DEAD/DEAH box helicase WU08_RS00890 PF01810 LysE type translocator WU08_RS00895 PF03144 Elongation factor Tu domain 2 WU08_RS00895 PF00009 Elongation factor Tu GTP binding domain WU08_RS00895 PF16658 Class II release factor RF3, C-terminal domain WU08_RS00905 PF00210 Ferritin-like domain WU08_RS00930 PF00581 Rhodanese-like domain WU08_RS00930 PF17773 UPF0176 acylphosphatase like domain WU08_RS00935 PF09334 tRNA synthetases class I (M) WU08_RS00935 PF01588 Putative tRNA binding domain WU08_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase WU08_RS00960 PF00692 dUTPase WU08_RS00985 PF01276 Orn/Lys/Arg decarboxylase, major domain WU08_RS00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain WU08_RS00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain WU08_RS01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WU08_RS01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WU08_RS01005 PF02535 ZIP Zinc transporter WU08_RS01010 PF01571 Aminomethyltransferase folate-binding domain WU08_RS01010 PF08669 Glycine cleavage T-protein C-terminal barrel domain WU08_RS01015 PF01597 Glycine cleavage H-protein WU08_RS01020 PF02347 Glycine cleavage system P-protein WU08_RS01025 PF00392 Bacterial regulatory proteins, gntR family WU08_RS01025 PF07729 FCD domain WU08_RS01030 PF02515 CoA-transferase family III WU08_RS01040 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS01060 PF12146 Serine aminopeptidase, S33 WU08_RS01070 PF02426 Muconolactone delta-isomerase WU08_RS01075 PF01144 Coenzyme A transferase WU08_RS01080 PF01144 Coenzyme A transferase WU08_RS01085 PF09339 IclR helix-turn-helix domain WU08_RS01085 PF01614 Bacterial transcriptional regulator WU08_RS01095 PF02667 Short chain fatty acid transporter WU08_RS01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU08_RS01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU08_RS01105 PF03797 Autotransporter beta-domain WU08_RS01105 PF00082 Subtilase family WU08_RS01110 PF00311 Phosphoenolpyruvate carboxylase WU08_RS01115 PF06508 Queuosine biosynthesis protein QueC WU08_RS01145 PF02913 FAD linked oxidases, C-terminal domain WU08_RS01145 PF01565 FAD binding domain WU08_RS01150 PF00171 Aldehyde dehydrogenase family WU08_RS01155 PF01964 Radical SAM ThiC family WU08_RS01155 PF13667 ThiC-associated domain WU08_RS01160 PF02355 Protein export membrane protein WU08_RS01160 PF07549 SecD/SecF GG Motif WU08_RS01165 PF09518 HindIII restriction endonuclease WU08_RS01195 PF02627 Carboxymuconolactone decarboxylase family WU08_RS01200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU08_RS01200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU08_RS01205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU08_RS01205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU08_RS01210 PF07702 UTRA domain WU08_RS01210 PF00392 Bacterial regulatory proteins, gntR family WU08_RS01215 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS01220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS01230 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS01235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WU08_RS01240 PF12627 Probable RNA and SrmB- binding site of polymerase A WU08_RS01240 PF12626 Polymerase A arginine-rich C-terminus WU08_RS01240 PF01743 Poly A polymerase head domain WU08_RS01250 PF00308 Bacterial dnaA protein WU08_RS01255 PF00586 AIR synthase related protein, N-terminal domain WU08_RS01255 PF02769 AIR synthase related protein, C-terminal domain WU08_RS01265 PF08676 MutL C terminal dimerisation domain WU08_RS01265 PF01119 DNA mismatch repair protein, C-terminal domain WU08_RS01270 PF09335 SNARE associated Golgi protein WU08_RS01275 PF01520 N-acetylmuramoyl-L-alanine amidase WU08_RS01275 PF11741 AMIN domain WU08_RS01280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE WU08_RS01285 PF00206 Lyase WU08_RS01285 PF10415 Fumarase C C-terminus WU08_RS01295 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS01300 PF03466 LysR substrate binding domain WU08_RS01310 PF02515 CoA-transferase family III WU08_RS01315 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS01320 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS01320 PF18158 Adaptive response protein AidB N-terminal domain WU08_RS01340 PF01654 Cytochrome bd terminal oxidase subunit I WU08_RS01345 PF02322 Cytochrome bd terminal oxidase subunit II WU08_RS01350 PF08173 Membrane bound YbgT-like protein WU08_RS01355 PF00005 ABC transporter WU08_RS01355 PF00664 ABC transporter transmembrane region WU08_RS01360 PF00005 ABC transporter WU08_RS01360 PF00664 ABC transporter transmembrane region WU08_RS01365 PF00156 Phosphoribosyl transferase domain WU08_RS01380 PF13609 Gram-negative porin WU08_RS01410 PF04386 Stringent starvation protein B WU08_RS01415 PF02798 Glutathione S-transferase, N-terminal domain WU08_RS01415 PF00043 Glutathione S-transferase, C-terminal domain WU08_RS01420 PF02167 Cytochrome C1 family WU08_RS01425 PF00033 Cytochrome b/b6/petB WU08_RS01425 PF00032 Cytochrome b(C-terminal)/b6/petD WU08_RS01430 PF00355 Rieske [2Fe-2S] domain WU08_RS01430 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WU08_RS01435 PF01741 Large-conductance mechanosensitive channel, MscL WU08_RS01440 PF01784 NIF3 (NGG1p interacting factor 3) WU08_RS01445 PF13180 PDZ domain WU08_RS01455 PF04299 Putative FMN-binding domain WU08_RS01460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU08_RS01465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS01470 PF07859 alpha/beta hydrolase fold WU08_RS01480 PF08502 LeuA allosteric (dimerisation) domain WU08_RS01480 PF00682 HMGL-like WU08_RS01485 PF12833 Helix-turn-helix domain WU08_RS01490 PF00920 Dehydratase family WU08_RS01495 PF07690 Major Facilitator Superfamily WU08_RS01500 PF03466 LysR substrate binding domain WU08_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS01510 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) WU08_RS01540 PF07859 alpha/beta hydrolase fold WU08_RS01550 PF02653 Branched-chain amino acid transport system / permease component WU08_RS01555 PF02653 Branched-chain amino acid transport system / permease component WU08_RS01555 PF11862 Domain of unknown function (DUF3382) WU08_RS01560 PF00005 ABC transporter WU08_RS01560 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS01565 PF00005 ABC transporter WU08_RS01580 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS01585 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS01585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS01585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS01590 PF13193 AMP-binding enzyme C-terminal domain WU08_RS01590 PF00501 AMP-binding enzyme WU08_RS01610 PF00202 Aminotransferase class-III WU08_RS01615 PF02581 Thiamine monophosphate synthase WU08_RS01620 PF08543 Phosphomethylpyrimidine kinase WU08_RS01625 PF00301 Rubredoxin WU08_RS01630 PF02622 Uncharacterized ACR, COG1678 WU08_RS01635 PF03652 Holliday junction resolvase WU08_RS01640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU08_RS01640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU08_RS01645 PF01979 Amidohydrolase family WU08_RS01650 PF01553 Acyltransferase WU08_RS01655 PF00149 Calcineurin-like phosphoesterase WU08_RS01665 PF00912 Transglycosylase WU08_RS01680 PF13193 AMP-binding enzyme C-terminal domain WU08_RS01680 PF00501 AMP-binding enzyme WU08_RS01685 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS01700 PF12706 Beta-lactamase superfamily domain WU08_RS01705 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS01710 PF03466 LysR substrate binding domain WU08_RS01720 PF11737 Protein of unknown function (DUF3300) WU08_RS01730 PF00990 Diguanylate cyclase, GGDEF domain WU08_RS01730 PF03707 Bacterial signalling protein N terminal repeat WU08_RS01730 PF00563 EAL domain WU08_RS01735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WU08_RS01735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WU08_RS01740 PF13532 2OG-Fe(II) oxygenase superfamily WU08_RS01745 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA WU08_RS01750 PF04463 Protein of unknown function (DUF523) WU08_RS01755 PF00005 ABC transporter WU08_RS01760 PF01032 FecCD transport family WU08_RS01765 PF01497 Periplasmic binding protein WU08_RS01770 PF05171 Haemin-degrading HemS.ChuX domain WU08_RS01775 PF04886 PT repeat WU08_RS01775 PF07715 TonB-dependent Receptor Plug Domain WU08_RS01775 PF00593 TonB dependent receptor WU08_RS01780 PF16220 Domain of unknown function (DUF4880) WU08_RS01780 PF04773 FecR protein WU08_RS01785 PF04542 Sigma-70 region 2 WU08_RS01785 PF08281 Sigma-70, region 4 WU08_RS01810 PF02423 Ornithine cyclodeaminase/mu-crystallin family WU08_RS01820 PF00392 Bacterial regulatory proteins, gntR family WU08_RS01820 PF07729 FCD domain WU08_RS01840 PF00171 Aldehyde dehydrogenase family WU08_RS01850 PF00175 Oxidoreductase NAD-binding domain WU08_RS01850 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS01850 PF00970 Oxidoreductase FAD-binding domain WU08_RS01875 PF03458 UPF0126 domain WU08_RS01880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WU08_RS01880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WU08_RS01885 PF03372 Endonuclease/Exonuclease/phosphatase family WU08_RS01890 PF00156 Phosphoribosyl transferase domain WU08_RS01895 PF02934 GatB/GatE catalytic domain WU08_RS01895 PF02637 GatB domain WU08_RS01900 PF01425 Amidase WU08_RS01905 PF02686 Glu-tRNAGln amidotransferase C subunit WU08_RS01915 PF04085 rod shape-determining protein MreC WU08_RS01925 PF00905 Penicillin binding protein transpeptidase domain WU08_RS01925 PF03717 Penicillin-binding Protein dimerisation domain WU08_RS01930 PF01098 Cell cycle protein WU08_RS01935 PF02615 Malate/L-lactate dehydrogenase WU08_RS01940 PF00939 Sodium:sulfate symporter transmembrane region WU08_RS01945 PF00440 Bacterial regulatory proteins, tetR family WU08_RS01955 PF00696 Amino acid kinase family WU08_RS01960 PF03180 NLPA lipoprotein WU08_RS01965 PF00578 AhpC/TSA family WU08_RS01970 PF04972 BON domain WU08_RS01975 PF13580 SIS domain WU08_RS01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WU08_RS01990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WU08_RS01990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WU08_RS02010 PF02515 CoA-transferase family III WU08_RS02015 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02020 PF02515 CoA-transferase family III WU08_RS02035 PF09339 IclR helix-turn-helix domain WU08_RS02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS02050 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU08_RS02055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU08_RS02055 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS02060 PF02515 CoA-transferase family III WU08_RS02065 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS02070 PF03466 LysR substrate binding domain WU08_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02090 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02100 PF00892 EamA-like transporter family WU08_RS02105 PF01810 LysE type translocator WU08_RS02110 PF12146 Serine aminopeptidase, S33 WU08_RS02130 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase WU08_RS02135 PF00535 Glycosyl transferase family 2 WU08_RS02155 PF03616 Sodium/glutamate symporter WU08_RS02165 PF02667 Short chain fatty acid transporter WU08_RS02180 PF00929 Exonuclease WU08_RS02185 PF00873 AcrB/AcrD/AcrF family WU08_RS02210 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS02215 PF03466 LysR substrate binding domain WU08_RS02220 PF01565 FAD binding domain WU08_RS02220 PF09330 D-lactate dehydrogenase, membrane binding WU08_RS02225 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS02225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS02225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS02230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS02230 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS02230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS02235 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02240 PF07687 Peptidase dimerisation domain WU08_RS02240 PF01546 Peptidase family M20/M25/M40 WU08_RS02250 PF01042 Endoribonuclease L-PSP WU08_RS02260 PF00107 Zinc-binding dehydrogenase WU08_RS02260 PF08240 Alcohol dehydrogenase GroES-like domain WU08_RS02265 PF03466 LysR substrate binding domain WU08_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS02270 PF13380 CoA binding domain WU08_RS02270 PF13607 Succinyl-CoA ligase like flavodoxin domain WU08_RS02275 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS02285 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02290 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family WU08_RS02295 PF01380 SIS domain WU08_RS02300 PF01037 Lrp/AsnC ligand binding domain WU08_RS02305 PF00108 Thiolase, N-terminal domain WU08_RS02305 PF02803 Thiolase, C-terminal domain WU08_RS02310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU08_RS02310 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS02310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU08_RS02315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS02315 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS02315 PF12806 Acetyl-CoA dehydrogenase C-terminal like WU08_RS02315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS02320 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02325 PF00583 Acetyltransferase (GNAT) family WU08_RS02325 PF13607 Succinyl-CoA ligase like flavodoxin domain WU08_RS02325 PF13380 CoA binding domain WU08_RS02340 PF01568 Molydopterin dinucleotide binding domain WU08_RS02340 PF00384 Molybdopterin oxidoreductase WU08_RS02360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain WU08_RS02360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain WU08_RS02360 PF01488 Shikimate / quinate 5-dehydrogenase WU08_RS02365 PF00472 RF-1 domain WU08_RS02365 PF03462 PCRF domain WU08_RS02370 PF05175 Methyltransferase small domain WU08_RS02370 PF17827 PrmC N-terminal domain WU08_RS02375 PF00462 Glutaredoxin WU08_RS02380 PF02441 Flavoprotein WU08_RS02385 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02390 PF09084 NMT1/THI5 like WU08_RS02395 PF00941 FAD binding domain in molybdopterin dehydrogenase WU08_RS02395 PF03450 CO dehydrogenase flavoprotein C-terminal domain WU08_RS02400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU08_RS02400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU08_RS02420 PF05036 Sporulation related domain WU08_RS02420 PF03330 Lytic transglycolase WU08_RS02425 PF03668 P-loop ATPase protein family WU08_RS02435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU08_RS02435 PF00034 Cytochrome c WU08_RS02435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU08_RS02440 PF07475 HPr Serine kinase C-terminal domain WU08_RS02440 PF02603 HPr Serine kinase N terminus WU08_RS02445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WU08_RS02450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WU08_RS02455 PF00005 ABC transporter WU08_RS02475 PF01380 SIS domain WU08_RS02475 PF00571 CBS domain WU08_RS02480 PF02222 ATP-grasp domain WU08_RS02480 PF01370 NAD dependent epimerase/dehydratase family WU08_RS02485 PF07715 TonB-dependent Receptor Plug Domain WU08_RS02485 PF00593 TonB dependent receptor WU08_RS02495 PF00732 GMC oxidoreductase WU08_RS02495 PF05199 GMC oxidoreductase WU08_RS02515 PF02938 GAD domain WU08_RS02515 PF00152 tRNA synthetases class II (D, K and N) WU08_RS02515 PF01336 OB-fold nucleic acid binding domain WU08_RS02520 PF03372 Endonuclease/Exonuclease/phosphatase family WU08_RS02525 PF13091 PLD-like domain WU08_RS02550 PF13458 Periplasmic binding protein WU08_RS02555 PF01425 Amidase WU08_RS02560 PF05995 Cysteine dioxygenase type I WU08_RS02565 PF01614 Bacterial transcriptional regulator WU08_RS02565 PF09339 IclR helix-turn-helix domain WU08_RS02570 PF02515 CoA-transferase family III WU08_RS02575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU08_RS02575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU08_RS02575 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS02580 PF05275 Copper resistance protein B precursor (CopB) WU08_RS02585 PF07732 Multicopper oxidase WU08_RS02585 PF07731 Multicopper oxidase WU08_RS02585 PF00394 Multicopper oxidase WU08_RS02615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU08_RS02615 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain WU08_RS02615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU08_RS02620 PF02515 CoA-transferase family III WU08_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS02640 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS02645 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS02650 PF01256 Carbohydrate kinase WU08_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS02675 PF12911 N-terminal TM domain of oligopeptide transport permease C WU08_RS02675 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS02680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS02680 PF00005 ABC transporter WU08_RS02690 PF07687 Peptidase dimerisation domain WU08_RS02690 PF01546 Peptidase family M20/M25/M40 WU08_RS02700 PF13361 UvrD-like helicase C-terminal domain WU08_RS02700 PF00580 UvrD/REP helicase N-terminal domain WU08_RS02705 PF00270 DEAD/DEAH box helicase WU08_RS02705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WU08_RS02705 PF17764 3′ DNA-binding domain (3′BD) WU08_RS02705 PF00271 Helicase conserved C-terminal domain WU08_RS02705 PF18074 Primosomal protein N C-terminal domain WU08_RS02710 PF01208 Uroporphyrinogen decarboxylase (URO-D) WU08_RS02720 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WU08_RS02725 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU08_RS02725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU08_RS02730 PF00231 ATP synthase WU08_RS02735 PF00306 ATP synthase alpha/beta chain, C terminal domain WU08_RS02735 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU08_RS02735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU08_RS02740 PF00213 ATP synthase delta (OSCP) subunit WU08_RS02745 PF00430 ATP synthase B/B' CF(0) WU08_RS02750 PF00137 ATP synthase subunit C WU08_RS02755 PF00119 ATP synthase A chain WU08_RS02780 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS02785 PF17820 PDZ domain WU08_RS02785 PF13180 PDZ domain WU08_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS02790 PF13192 Thioredoxin domain WU08_RS02800 PF01171 PP-loop family WU08_RS02810 PF01842 ACT domain WU08_RS02810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU08_RS02810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU08_RS02815 PF10411 Disulfide bond isomerase protein N-terminus WU08_RS02815 PF13098 Thioredoxin-like domain WU08_RS02820 PF01494 FAD binding domain WU08_RS02825 PF03562 MltA specific insert domain WU08_RS02825 PF06725 3D domain WU08_RS02830 PF04379 ApaG domain WU08_RS02835 PF00834 Ribulose-phosphate 3 epimerase family WU08_RS02840 PF13419 Haloacid dehalogenase-like hydrolase WU08_RS02845 PF04715 Anthranilate synthase component I, N terminal region WU08_RS02845 PF00425 chorismate binding enzyme WU08_RS02850 PF00117 Glutamine amidotransferase class-I WU08_RS02855 PF02885 Glycosyl transferase family, helical bundle domain WU08_RS02855 PF00591 Glycosyl transferase family, a/b domain WU08_RS02860 PF00218 Indole-3-glycerol phosphate synthase WU08_RS02880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS02880 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS02880 PF18158 Adaptive response protein AidB N-terminal domain WU08_RS02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS02885 PF03466 LysR substrate binding domain WU08_RS02890 PF00551 Formyl transferase WU08_RS02900 PF01613 Flavin reductase like domain WU08_RS02905 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WU08_RS02905 PF01243 Pyridoxamine 5'-phosphate oxidase WU08_RS02915 PF07690 Major Facilitator Superfamily WU08_RS02920 PF00899 ThiF family WU08_RS02925 PF07702 UTRA domain WU08_RS02925 PF00392 Bacterial regulatory proteins, gntR family WU08_RS02930 PF13193 AMP-binding enzyme C-terminal domain WU08_RS02930 PF00501 AMP-binding enzyme WU08_RS02935 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS02950 PF01063 Amino-transferase class IV WU08_RS02955 PF00425 chorismate binding enzyme WU08_RS02955 PF04715 Anthranilate synthase component I, N terminal region WU08_RS02960 PF17755 UvrA DNA-binding domain WU08_RS02960 PF00005 ABC transporter WU08_RS02960 PF17760 UvrA interaction domain WU08_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS02970 PF03466 LysR substrate binding domain WU08_RS02975 PF00535 Glycosyl transferase family 2 WU08_RS02980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS03000 PF12848 ABC transporter WU08_RS03000 PF00005 ABC transporter WU08_RS03020 PF03776 Septum formation topological specificity factor MinE WU08_RS03025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WU08_RS03030 PF03775 Septum formation inhibitor MinC, C-terminal domain WU08_RS03030 PF05209 Septum formation inhibitor MinC, N-terminal domain WU08_RS03035 PF00749 tRNA synthetases class I (E and Q), catalytic domain WU08_RS03035 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain WU08_RS03040 PF01654 Cytochrome bd terminal oxidase subunit I WU08_RS03050 PF13493 Domain of unknown function (DUF4118) WU08_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS03050 PF02702 Osmosensitive K+ channel His kinase sensor domain WU08_RS03055 PF00486 Transcriptional regulatory protein, C terminal WU08_RS03055 PF00072 Response regulator receiver domain WU08_RS03070 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS03075 PF04391 Protein of unknown function (DUF533) WU08_RS03095 PF01464 Transglycosylase SLT domain WU08_RS03095 PF01476 LysM domain WU08_RS03100 PF00753 Metallo-beta-lactamase superfamily WU08_RS03100 PF16123 Hydroxyacylglutathione hydrolase C-terminus WU08_RS03105 PF08241 Methyltransferase domain WU08_RS03110 PF00075 RNase H WU08_RS03120 PF00732 GMC oxidoreductase WU08_RS03120 PF05199 GMC oxidoreductase WU08_RS03160 PF01575 MaoC like domain WU08_RS03165 PF02803 Thiolase, C-terminal domain WU08_RS03165 PF00108 Thiolase, N-terminal domain WU08_RS03175 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS03180 PF00106 short chain dehydrogenase WU08_RS03190 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS03190 PF00005 ABC transporter WU08_RS03195 PF00005 ABC transporter WU08_RS03200 PF02653 Branched-chain amino acid transport system / permease component WU08_RS03210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS03210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS03210 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS03215 PF08361 MAATS-type transcriptional repressor, C-terminal region WU08_RS03215 PF00440 Bacterial regulatory proteins, tetR family WU08_RS03220 PF14535 AMP-binding enzyme C-terminal domain WU08_RS03220 PF00501 AMP-binding enzyme WU08_RS03225 PF02515 CoA-transferase family III WU08_RS03245 PF04285 Protein of unknown function (DUF444) WU08_RS03250 PF04293 SpoVR like protein WU08_RS03265 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS03270 PF07476 Methylaspartate ammonia-lyase C-terminus WU08_RS03270 PF05034 Methylaspartate ammonia-lyase N-terminus WU08_RS03275 PF07702 UTRA domain WU08_RS03275 PF00392 Bacterial regulatory proteins, gntR family WU08_RS03290 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS03295 PF00376 MerR family regulatory protein WU08_RS03295 PF09278 MerR, DNA binding WU08_RS03300 PF01774 UreD urease accessory protein WU08_RS03305 PF00547 Urease, gamma subunit WU08_RS03310 PF04955 HupE / UreJ protein WU08_RS03315 PF00699 Urease beta subunit WU08_RS03320 PF00449 Urease alpha-subunit, N-terminal domain WU08_RS03320 PF01979 Amidohydrolase family WU08_RS03325 PF05194 UreE urease accessory protein, C-terminal domain WU08_RS03325 PF02814 UreE urease accessory protein, N-terminal domain WU08_RS03330 PF01730 UreF WU08_RS03335 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU08_RS03345 PF07364 Metallopeptidase family M81 WU08_RS03345 PF07171 MlrC C-terminus WU08_RS03355 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS03360 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS03365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS03375 PF00202 Aminotransferase class-III WU08_RS03380 PF00392 Bacterial regulatory proteins, gntR family WU08_RS03380 PF00155 Aminotransferase class I and II WU08_RS03385 PF00186 Dihydrofolate reductase WU08_RS03390 PF00303 Thymidylate synthase WU08_RS03400 PF03232 Ubiquinone biosynthesis protein COQ7 WU08_RS03405 PF00953 Glycosyl transferase family 4 WU08_RS03410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU08_RS03410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU08_RS03410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU08_RS03415 PF01370 NAD dependent epimerase/dehydratase family WU08_RS03420 PF03023 Lipid II flippase MurJ WU08_RS03425 PF13439 Glycosyltransferase Family 4 WU08_RS03425 PF00534 Glycosyl transferases group 1 WU08_RS03430 PF00733 Asparagine synthase WU08_RS03430 PF13537 Glutamine amidotransferase domain WU08_RS03435 PF00534 Glycosyl transferases group 1 WU08_RS03435 PF13439 Glycosyltransferase Family 4 WU08_RS03440 PF13439 Glycosyltransferase Family 4 WU08_RS03440 PF00534 Glycosyl transferases group 1 WU08_RS03445 PF13477 Glycosyl transferase 4-like WU08_RS03445 PF00534 Glycosyl transferases group 1 WU08_RS03450 PF00342 Phosphoglucose isomerase WU08_RS03455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU08_RS03455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU08_RS03455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU08_RS03455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU08_RS03465 PF02913 FAD linked oxidases, C-terminal domain WU08_RS03465 PF01565 FAD binding domain WU08_RS03470 PF00486 Transcriptional regulatory protein, C terminal WU08_RS03470 PF00072 Response regulator receiver domain WU08_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS03475 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS03475 PF08521 Two-component sensor kinase N-terminal WU08_RS03480 PF00884 Sulfatase WU08_RS03490 PF04209 homogentisate 1,2-dioxygenase WU08_RS03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS03495 PF03466 LysR substrate binding domain WU08_RS03505 PF01494 FAD binding domain WU08_RS03515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WU08_RS03515 PF06827 Zinc finger found in FPG and IleRS WU08_RS03515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WU08_RS03525 PF03550 Outer membrane lipoprotein LolB WU08_RS03530 PF00288 GHMP kinases N terminal domain WU08_RS03530 PF08544 GHMP kinases C terminal WU08_RS03540 PF14572 Phosphoribosyl synthetase-associated domain WU08_RS03540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WU08_RS03545 PF14693 Ribosomal protein TL5, C-terminal domain WU08_RS03545 PF01386 Ribosomal L25p family WU08_RS03550 PF01195 Peptidyl-tRNA hydrolase WU08_RS03560 PF01926 50S ribosome-binding GTPase WU08_RS03560 PF06071 Protein of unknown function (DUF933) WU08_RS03565 PF00589 Phage integrase family WU08_RS03565 PF13356 Arm DNA-binding domain WU08_RS03585 PF01555 DNA methylase WU08_RS03590 PF13175 AAA ATPase domain WU08_RS03625 PF00580 UvrD/REP helicase N-terminal domain WU08_RS03625 PF13361 UvrD-like helicase C-terminal domain WU08_RS03645 PF12951 Passenger-associated-transport-repeat WU08_RS03655 PF00072 Response regulator receiver domain WU08_RS03655 PF00486 Transcriptional regulatory protein, C terminal WU08_RS03670 PF00440 Bacterial regulatory proteins, tetR family WU08_RS03670 PF17938 Tetracyclin repressor-like, C-terminal domain WU08_RS03700 PF01266 FAD dependent oxidoreductase WU08_RS03715 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS03725 PF01810 LysE type translocator WU08_RS03770 PF00561 alpha/beta hydrolase fold WU08_RS03780 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS03785 PF03459 TOBE domain WU08_RS03785 PF00005 ABC transporter WU08_RS03790 PF13091 PLD-like domain WU08_RS03800 PF03167 Uracil DNA glycosylase superfamily WU08_RS03805 PF00271 Helicase conserved C-terminal domain WU08_RS03805 PF00270 DEAD/DEAH box helicase WU08_RS03815 PF01743 Poly A polymerase head domain WU08_RS03815 PF12627 Probable RNA and SrmB- binding site of polymerase A WU08_RS03820 PF01464 Transglycosylase SLT domain WU08_RS03820 PF14718 Soluble lytic murein transglycosylase L domain WU08_RS03830 PF00083 Sugar (and other) transporter WU08_RS03830 PF07690 Major Facilitator Superfamily WU08_RS03835 PF00850 Histone deacetylase domain WU08_RS03840 PF03466 LysR substrate binding domain WU08_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS03850 PF02219 Methylenetetrahydrofolate reductase WU08_RS03855 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV WU08_RS03860 PF05221 S-adenosyl-L-homocysteine hydrolase WU08_RS03860 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WU08_RS03865 PF00534 Glycosyl transferases group 1 WU08_RS03865 PF13439 Glycosyltransferase Family 4 WU08_RS03875 PF02772 S-adenosylmethionine synthetase, central domain WU08_RS03875 PF02773 S-adenosylmethionine synthetase, C-terminal domain WU08_RS03875 PF00438 S-adenosylmethionine synthetase, N-terminal domain WU08_RS03885 PF03279 Bacterial lipid A biosynthesis acyltransferase WU08_RS03890 PF01678 Diaminopimelate epimerase WU08_RS03900 PF00589 Phage integrase family WU08_RS03900 PF02899 Phage integrase, N-terminal SAM-like domain WU08_RS03905 PF07715 TonB-dependent Receptor Plug Domain WU08_RS03905 PF00593 TonB dependent receptor WU08_RS03910 PF03824 High-affinity nickel-transport protein WU08_RS03920 PF01297 Zinc-uptake complex component A periplasmic WU08_RS03925 PF00950 ABC 3 transport family WU08_RS03930 PF00005 ABC transporter WU08_RS03940 PF01475 Ferric uptake regulator family WU08_RS03945 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU08_RS03945 PF07683 Cobalamin synthesis protein cobW C-terminal domain WU08_RS03950 PF01258 Prokaryotic dksA/traR C4-type zinc finger WU08_RS03955 PF00227 Proteasome subunit WU08_RS03960 PF07724 AAA domain (Cdc48 subfamily) WU08_RS03960 PF10431 C-terminal, D2-small domain, of ClpB protein WU08_RS03960 PF00004 ATPase family associated with various cellular activities (AAA) WU08_RS03970 PF01923 Cobalamin adenosyltransferase WU08_RS03985 PF02525 Flavodoxin-like fold WU08_RS03990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU08_RS03990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU08_RS04000 PF01970 Tripartite tricarboxylate transporter TctA family WU08_RS04040 PF01790 Prolipoprotein diacylglyceryl transferase WU08_RS04045 PF00920 Dehydratase family WU08_RS04050 PF00034 Cytochrome c WU08_RS04055 PF01625 Peptide methionine sulfoxide reductase WU08_RS04060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU08_RS04065 PF01037 Lrp/AsnC ligand binding domain WU08_RS04105 PF01546 Peptidase family M20/M25/M40 WU08_RS04105 PF07687 Peptidase dimerisation domain WU08_RS04110 PF01979 Amidohydrolase family WU08_RS04115 PF12848 ABC transporter WU08_RS04115 PF00005 ABC transporter WU08_RS04115 PF16326 ABC transporter C-terminal domain WU08_RS04125 PF02381 MraZ protein, putative antitoxin-like WU08_RS04130 PF01795 MraW methylase family WU08_RS04135 PF04999 Cell division protein FtsL WU08_RS04140 PF03717 Penicillin-binding Protein dimerisation domain WU08_RS04140 PF00905 Penicillin binding protein transpeptidase domain WU08_RS04145 PF02875 Mur ligase family, glutamate ligase domain WU08_RS04145 PF08245 Mur ligase middle domain WU08_RS04150 PF00953 Glycosyl transferase family 4 WU08_RS04155 PF08245 Mur ligase middle domain WU08_RS04155 PF02875 Mur ligase family, glutamate ligase domain WU08_RS04160 PF01098 Cell cycle protein WU08_RS04165 PF03033 Glycosyltransferase family 28 N-terminal domain WU08_RS04165 PF04101 Glycosyltransferase family 28 C-terminal domain WU08_RS04170 PF02875 Mur ligase family, glutamate ligase domain WU08_RS04170 PF01225 Mur ligase family, catalytic domain WU08_RS04170 PF08245 Mur ligase middle domain WU08_RS04175 PF01820 D-ala D-ala ligase N-terminus WU08_RS04175 PF07478 D-ala D-ala ligase C-terminus WU08_RS04180 PF03799 Cell division protein FtsQ WU08_RS04180 PF08478 POTRA domain, FtsQ-type WU08_RS04185 PF02491 SHS2 domain inserted in FTSA WU08_RS04190 PF12327 FtsZ family, C-terminal domain WU08_RS04190 PF00091 Tubulin/FtsZ family, GTPase domain WU08_RS04195 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WU08_RS04205 PF01551 Peptidase family M23 WU08_RS04205 PF01476 LysM domain WU08_RS04205 PF08525 Opacity-associated protein A N-terminal motif WU08_RS04210 PF01043 SecA preprotein cross-linking domain WU08_RS04210 PF07517 SecA DEAD-like domain WU08_RS04210 PF07516 SecA Wing and Scaffold domain WU08_RS04210 PF02810 SEC-C motif WU08_RS04220 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS04230 PF00106 short chain dehydrogenase WU08_RS04235 PF01266 FAD dependent oxidoreductase WU08_RS04240 PF01037 Lrp/AsnC ligand binding domain WU08_RS04250 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP WU08_RS04260 PF08501 Shikimate dehydrogenase substrate binding domain WU08_RS04260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain WU08_RS04260 PF01488 Shikimate / quinate 5-dehydrogenase WU08_RS04270 PF00773 RNB domain WU08_RS04275 PF05728 Uncharacterised protein family (UPF0227) WU08_RS04280 PF01225 Mur ligase family, catalytic domain WU08_RS04280 PF02875 Mur ligase family, glutamate ligase domain WU08_RS04280 PF08245 Mur ligase middle domain WU08_RS04285 PF08534 Redoxin WU08_RS04290 PF01220 Dehydroquinase class II WU08_RS04295 PF00364 Biotin-requiring enzyme WU08_RS04300 PF00289 Biotin carboxylase, N-terminal domain WU08_RS04300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU08_RS04300 PF02785 Biotin carboxylase C-terminal domain WU08_RS04315 PF00294 pfkB family carbohydrate kinase WU08_RS04340 PF03062 MBOAT, membrane-bound O-acyltransferase family WU08_RS04345 PF13193 AMP-binding enzyme C-terminal domain WU08_RS04345 PF00501 AMP-binding enzyme WU08_RS04360 PF00268 Ribonucleotide reductase, small chain WU08_RS04365 PF02867 Ribonucleotide reductase, barrel domain WU08_RS04365 PF00317 Ribonucleotide reductase, all-alpha domain WU08_RS04365 PF03477 ATP cone domain WU08_RS04380 PF01037 Lrp/AsnC ligand binding domain WU08_RS04395 PF00749 tRNA synthetases class I (E and Q), catalytic domain WU08_RS04400 PF13607 Succinyl-CoA ligase like flavodoxin domain WU08_RS04400 PF13380 CoA binding domain WU08_RS04400 PF00583 Acetyltransferase (GNAT) family WU08_RS04415 PF07729 FCD domain WU08_RS04415 PF00392 Bacterial regulatory proteins, gntR family WU08_RS04425 PF00271 Helicase conserved C-terminal domain WU08_RS04425 PF00270 DEAD/DEAH box helicase WU08_RS04425 PF03880 DbpA RNA binding domain WU08_RS04430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU08_RS04435 PF00857 Isochorismatase family WU08_RS04440 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS04445 PF00005 ABC transporter WU08_RS04455 PF02230 Phospholipase/Carboxylesterase WU08_RS04460 PF04751 Protein of unknown function (DUF615) WU08_RS04465 PF01523 Putative modulator of DNA gyrase WU08_RS04470 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS04475 PF00572 Ribosomal protein L13 WU08_RS04480 PF00380 Ribosomal protein S9/S16 WU08_RS04485 PF02774 Semialdehyde dehydrogenase, dimerisation domain WU08_RS04485 PF01118 Semialdehyde dehydrogenase, NAD binding domain WU08_RS04495 PF01521 Iron-sulphur cluster biosynthesis WU08_RS04500 PF03702 Anhydro-N-acetylmuramic acid kinase WU08_RS04505 PF01551 Peptidase family M23 WU08_RS04505 PF08460 Bacterial SH3 domain WU08_RS04515 PF01479 S4 domain WU08_RS04515 PF00579 tRNA synthetases class I (W and Y) WU08_RS04525 PF00464 Serine hydroxymethyltransferase WU08_RS04530 PF03477 ATP cone domain WU08_RS04545 PF01872 RibD C-terminal domain WU08_RS04545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU08_RS04560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS04560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS04560 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS04560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS04560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS04560 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS04570 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS04575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS04575 PF03466 LysR substrate binding domain WU08_RS04580 PF02515 CoA-transferase family III WU08_RS04600 PF02678 Pirin WU08_RS04600 PF05726 Pirin C-terminal cupin domain WU08_RS04615 PF00072 Response regulator receiver domain WU08_RS04620 PF06481 COX Aromatic Rich Motif WU08_RS04620 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WU08_RS04625 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU08_RS04630 PF00510 Cytochrome c oxidase subunit III WU08_RS04635 PF03626 Prokaryotic Cytochrome C oxidase subunit IV WU08_RS04640 PF01022 Bacterial regulatory protein, arsR family WU08_RS04660 PF05114 Protein of unknown function (DUF692) WU08_RS04675 PF07715 TonB-dependent Receptor Plug Domain WU08_RS04675 PF00593 TonB dependent receptor WU08_RS04690 PF01476 LysM domain WU08_RS04690 PF01551 Peptidase family M23 WU08_RS04705 PF04461 Protein of unknown function (DUF520) WU08_RS04715 PF08281 Sigma-70, region 4 WU08_RS04715 PF04542 Sigma-70 region 2 WU08_RS04735 PF00795 Carbon-nitrogen hydrolase WU08_RS04740 PF01523 Putative modulator of DNA gyrase WU08_RS04745 PF00793 DAHP synthetase I family WU08_RS04750 PF13332 Hemagglutinin repeat WU08_RS04750 PF05860 haemagglutination activity domain WU08_RS04750 PF05594 Haemagluttinin repeat WU08_RS04750 PF13332 Hemagglutinin repeat WU08_RS04750 PF05594 Haemagluttinin repeat WU08_RS04750 PF05860 haemagglutination activity domain WU08_RS04750 PF13018 Extended Signal Peptide of Type V secretion system WU08_RS04750 PF13018 Extended Signal Peptide of Type V secretion system WU08_RS04755 PF02913 FAD linked oxidases, C-terminal domain WU08_RS04755 PF01565 FAD binding domain WU08_RS04760 PF02913 FAD linked oxidases, C-terminal domain WU08_RS04760 PF01565 FAD binding domain WU08_RS04765 PF01565 FAD binding domain WU08_RS04770 PF13183 4Fe-4S dicluster domain WU08_RS04770 PF02754 Cysteine-rich domain WU08_RS04775 PF00756 Putative esterase WU08_RS04780 PF07715 TonB-dependent Receptor Plug Domain WU08_RS04780 PF00593 TonB dependent receptor WU08_RS04790 PF02233 NAD(P) transhydrogenase beta subunit WU08_RS04795 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch WU08_RS04800 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch WU08_RS04805 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WU08_RS04805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WU08_RS04815 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS04820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS04820 PF03466 LysR substrate binding domain WU08_RS04830 PF01925 Sulfite exporter TauE/SafE WU08_RS04835 PF13417 Glutathione S-transferase, N-terminal domain WU08_RS04835 PF00043 Glutathione S-transferase, C-terminal domain WU08_RS04840 PF08328 Adenylosuccinate lyase C-terminal WU08_RS04840 PF00206 Lyase WU08_RS04845 PF01322 Cytochrome C' WU08_RS04865 PF01594 AI-2E family transporter WU08_RS04875 PF00392 Bacterial regulatory proteins, gntR family WU08_RS04875 PF07729 FCD domain WU08_RS04885 PF01425 Amidase WU08_RS04890 PF02515 CoA-transferase family III WU08_RS04895 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS04915 PF00005 ABC transporter WU08_RS04930 PF09339 IclR helix-turn-helix domain WU08_RS04930 PF01614 Bacterial transcriptional regulator WU08_RS04940 PF13193 AMP-binding enzyme C-terminal domain WU08_RS04940 PF00501 AMP-binding enzyme WU08_RS04945 PF01042 Endoribonuclease L-PSP WU08_RS04950 PF02653 Branched-chain amino acid transport system / permease component WU08_RS04965 PF00005 ABC transporter WU08_RS04970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WU08_RS04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS04985 PF03466 LysR substrate binding domain WU08_RS04995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU08_RS05000 PF07690 Major Facilitator Superfamily WU08_RS05005 PF03466 LysR substrate binding domain WU08_RS05005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS05020 PF01425 Amidase WU08_RS05025 PF00677 Lumazine binding domain WU08_RS05030 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS05035 PF13404 AsnC-type helix-turn-helix domain WU08_RS05035 PF01037 Lrp/AsnC ligand binding domain WU08_RS05045 PF00501 AMP-binding enzyme WU08_RS05045 PF13193 AMP-binding enzyme C-terminal domain WU08_RS05055 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS05060 PF00005 ABC transporter WU08_RS05075 PF08240 Alcohol dehydrogenase GroES-like domain WU08_RS05075 PF00107 Zinc-binding dehydrogenase WU08_RS05095 PF00403 Heavy-metal-associated domain WU08_RS05100 PF01966 HD domain WU08_RS05105 PF00155 Aminotransferase class I and II WU08_RS05110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS05110 PF03466 LysR substrate binding domain WU08_RS05120 PF00083 Sugar (and other) transporter WU08_RS05140 PF13609 Gram-negative porin WU08_RS05145 PF02548 Ketopantoate hydroxymethyltransferase WU08_RS05150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS05150 PF03466 LysR substrate binding domain WU08_RS05215 PF00440 Bacterial regulatory proteins, tetR family WU08_RS05225 PF05170 AsmA family WU08_RS05230 PF03352 Methyladenine glycosylase WU08_RS05235 PF09278 MerR, DNA binding WU08_RS05235 PF00376 MerR family regulatory protein WU08_RS05250 PF01547 Bacterial extracellular solute-binding protein WU08_RS05260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU08_RS05260 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS05265 PF08402 TOBE domain WU08_RS05265 PF00005 ABC transporter WU08_RS05270 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS05275 PF14785 Maltose transport system permease protein MalF P2 domain WU08_RS05275 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS05295 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS05300 PF07729 FCD domain WU08_RS05300 PF00392 Bacterial regulatory proteins, gntR family WU08_RS05330 PF00465 Iron-containing alcohol dehydrogenase WU08_RS05345 PF03180 NLPA lipoprotein WU08_RS05350 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS05355 PF09383 NIL domain WU08_RS05355 PF00005 ABC transporter WU08_RS05360 PF01055 Glycosyl hydrolases family 31 WU08_RS05360 PF13802 Galactose mutarotase-like WU08_RS05370 PF00459 Inositol monophosphatase family WU08_RS05385 PF13193 AMP-binding enzyme C-terminal domain WU08_RS05385 PF00501 AMP-binding enzyme WU08_RS05390 PF07687 Peptidase dimerisation domain WU08_RS05390 PF01546 Peptidase family M20/M25/M40 WU08_RS05395 PF03466 LysR substrate binding domain WU08_RS05395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS05400 PF03601 Conserved hypothetical protein 698 WU08_RS05405 PF03061 Thioesterase superfamily WU08_RS05410 PF01769 Divalent cation transporter WU08_RS05410 PF03448 MgtE intracellular N domain WU08_RS05410 PF00571 CBS domain WU08_RS05430 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS05440 PF02609 Exonuclease VII small subunit WU08_RS05445 PF00348 Polyprenyl synthetase WU08_RS05450 PF02780 Transketolase, C-terminal domain WU08_RS05450 PF13292 1-deoxy-D-xylulose-5-phosphate synthase WU08_RS05450 PF02779 Transketolase, pyrimidine binding domain WU08_RS05455 PF02649 Type I GTP cyclohydrolase folE2 WU08_RS05460 PF01250 Ribosomal protein S6 WU08_RS05470 PF01084 Ribosomal protein S18 WU08_RS05475 PF03948 Ribosomal protein L9, C-terminal domain WU08_RS05475 PF01281 Ribosomal protein L9, N-terminal domain WU08_RS05485 PF03796 DnaB-like helicase C terminal domain WU08_RS05485 PF00772 DnaB-like helicase N terminal domain WU08_RS05490 PF13593 SBF-like CPA transporter family (DUF4137) WU08_RS05495 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WU08_RS05500 PF02562 PhoH-like protein WU08_RS05500 PF13638 PIN domain WU08_RS05505 PF00578 AhpC/TSA family WU08_RS05510 PF04430 Protein of unknown function (DUF498/DUF598) WU08_RS05515 PF00155 Aminotransferase class I and II WU08_RS05520 PF01842 ACT domain WU08_RS05520 PF03447 Homoserine dehydrogenase, NAD binding domain WU08_RS05520 PF00742 Homoserine dehydrogenase WU08_RS05525 PF00291 Pyridoxal-phosphate dependent enzyme WU08_RS05525 PF14821 Threonine synthase N terminus WU08_RS05540 PF02615 Malate/L-lactate dehydrogenase WU08_RS05550 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS05565 PF03328 HpcH/HpaI aldolase/citrate lyase family WU08_RS05570 PF01649 Ribosomal protein S20 WU08_RS05580 PF03023 Lipid II flippase MurJ WU08_RS05585 PF00106 short chain dehydrogenase WU08_RS05590 PF05191 Adenylate kinase, active site lid WU08_RS05595 PF02348 Cytidylyltransferase WU08_RS05600 PF03966 Trm112p-like protein WU08_RS05605 PF02606 Tetraacyldisaccharide-1-P 4'-kinase WU08_RS05610 PF02472 Biopolymer transport protein ExbD/TolR WU08_RS05615 PF01618 MotA/TolQ/ExbB proton channel family WU08_RS05625 PF02601 Exonuclease VII, large subunit WU08_RS05625 PF13742 OB-fold nucleic acid binding domain WU08_RS05630 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WU08_RS05630 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WU08_RS05635 PF00654 Voltage gated chloride channel WU08_RS05640 PF02803 Thiolase, C-terminal domain WU08_RS05640 PF00108 Thiolase, N-terminal domain WU08_RS05650 PF00313 'Cold-shock' DNA-binding domain WU08_RS05655 PF02617 ATP-dependent Clp protease adaptor protein ClpS WU08_RS05660 PF17962 Bacterial macroglobulin domain 6 WU08_RS05660 PF01835 MG2 domain WU08_RS05660 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain WU08_RS05660 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain WU08_RS05660 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain WU08_RS05660 PF11974 Bacterial alpha-2-macroglobulin MG3 domain WU08_RS05660 PF00207 Alpha-2-macroglobulin family WU08_RS05660 PF07703 Alpha-2-macroglobulin bait region domain WU08_RS05665 PF00905 Penicillin binding protein transpeptidase domain WU08_RS05665 PF00912 Transglycosylase WU08_RS05665 PF06832 Penicillin-Binding Protein C-terminus Family WU08_RS05670 PF00004 ATPase family associated with various cellular activities (AAA) WU08_RS05670 PF07724 AAA domain (Cdc48 subfamily) WU08_RS05670 PF17871 AAA lid domain WU08_RS05670 PF02861 Clp amino terminal domain, pathogenicity island component WU08_RS05670 PF10431 C-terminal, D2-small domain, of ClpB protein WU08_RS05675 PF04403 Paraquat-inducible protein A WU08_RS05680 PF02470 MlaD protein WU08_RS05690 PF14850 DNA-binding domain of Proline dehydrogenase WU08_RS05690 PF01619 Proline dehydrogenase WU08_RS05690 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WU08_RS05690 PF00171 Aldehyde dehydrogenase family WU08_RS05700 PF13458 Periplasmic binding protein WU08_RS05705 PF02653 Branched-chain amino acid transport system / permease component WU08_RS05710 PF02653 Branched-chain amino acid transport system / permease component WU08_RS05710 PF11862 Domain of unknown function (DUF3382) WU08_RS05715 PF00005 ABC transporter WU08_RS05715 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS05720 PF00005 ABC transporter WU08_RS05725 PF07690 Major Facilitator Superfamily WU08_RS05730 PF00440 Bacterial regulatory proteins, tetR family WU08_RS05740 PF03797 Autotransporter beta-domain WU08_RS05740 PF03212 Pertactin WU08_RS05750 PF00543 Nitrogen regulatory protein P-II WU08_RS05755 PF04380 Membrane fusogenic activity WU08_RS05770 PF00083 Sugar (and other) transporter WU08_RS05770 PF07690 Major Facilitator Superfamily WU08_RS05780 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU08_RS05785 PF00510 Cytochrome c oxidase subunit III WU08_RS05790 PF03626 Prokaryotic Cytochrome C oxidase subunit IV WU08_RS05795 PF02104 SURF1 family WU08_RS05820 PF13411 MerR HTH family regulatory protein WU08_RS05825 PF00403 Heavy-metal-associated domain WU08_RS05845 PF04055 Radical SAM superfamily WU08_RS05845 PF06968 Biotin and Thiamin Synthesis associated domain WU08_RS05860 PF08534 Redoxin WU08_RS05870 PF01738 Dienelactone hydrolase family WU08_RS05880 PF01967 MoaC family WU08_RS05890 PF02391 MoaE protein WU08_RS05895 PF00994 Probable molybdopterin binding domain WU08_RS05900 PF03453 MoeA N-terminal region (domain I and II) WU08_RS05900 PF03454 MoeA C-terminal region (domain IV) WU08_RS05900 PF00994 Probable molybdopterin binding domain WU08_RS05905 PF06463 Molybdenum Cofactor Synthesis C WU08_RS05905 PF04055 Radical SAM superfamily WU08_RS05925 PF00206 Lyase WU08_RS05925 PF14698 Argininosuccinate lyase C-terminal WU08_RS05930 PF00924 Mechanosensitive ion channel WU08_RS05935 PF02540 NAD synthase WU08_RS05935 PF00795 Carbon-nitrogen hydrolase WU08_RS05940 PF00543 Nitrogen regulatory protein P-II WU08_RS05965 PF03466 LysR substrate binding domain WU08_RS05965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS05975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS05980 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS05985 PF12911 N-terminal TM domain of oligopeptide transport permease C WU08_RS05990 PF03193 RsgA GTPase WU08_RS05995 PF01435 Peptidase family M48 WU08_RS06000 PF00929 Exonuclease WU08_RS06005 PF03853 YjeF-related protein N-terminus WU08_RS06010 PF07848 PaaX-like protein WU08_RS06010 PF08223 PaaX-like protein C-terminal domain WU08_RS06015 PF05138 Phenylacetic acid catabolic protein WU08_RS06020 PF06243 Phenylacetic acid degradation B WU08_RS06025 PF05138 Phenylacetic acid catabolic protein WU08_RS06030 PF01883 Iron-sulfur cluster assembly protein WU08_RS06035 PF00970 Oxidoreductase FAD-binding domain WU08_RS06035 PF00175 Oxidoreductase NAD-binding domain WU08_RS06035 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS06045 PF00171 Aldehyde dehydrogenase family WU08_RS06050 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS06055 PF03061 Thioesterase superfamily WU08_RS06060 PF14535 AMP-binding enzyme C-terminal domain WU08_RS06060 PF00501 AMP-binding enzyme WU08_RS06065 PF16970 Type-1 fimbrial protein, A WU08_RS06085 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS06090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS06090 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU08_RS06095 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU08_RS06100 PF02769 AIR synthase related protein, C-terminal domain WU08_RS06100 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WU08_RS06100 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal WU08_RS06105 PF13332 Hemagglutinin repeat WU08_RS06105 PF05594 Haemagluttinin repeat WU08_RS06105 PF13018 Extended Signal Peptide of Type V secretion system WU08_RS06105 PF05860 haemagglutination activity domain WU08_RS06130 PF00596 Class II Aldolase and Adducin N-terminal domain WU08_RS06135 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS06140 PF01242 6-pyruvoyl tetrahydropterin synthase WU08_RS06150 PF00472 RF-1 domain WU08_RS06170 PF00701 Dihydrodipicolinate synthetase family WU08_RS06175 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS06200 PF14537 Cytochrome c3 WU08_RS06200 PF00890 FAD binding domain WU08_RS06205 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS06220 PF01266 FAD dependent oxidoreductase WU08_RS06220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase WU08_RS06225 PF00455 DeoR C terminal sensor domain WU08_RS06225 PF08220 DeoR-like helix-turn-helix domain WU08_RS06230 PF00005 ABC transporter WU08_RS06230 PF17912 MalK OB fold domain WU08_RS06235 PF00005 ABC transporter WU08_RS06235 PF17912 MalK OB fold domain WU08_RS06245 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS06270 PF01037 Lrp/AsnC ligand binding domain WU08_RS06275 PF01266 FAD dependent oxidoreductase WU08_RS06280 PF00149 Calcineurin-like phosphoesterase WU08_RS06280 PF12320 Type 5 capsule protein repressor C-terminal domain WU08_RS06320 PF00571 CBS domain WU08_RS06320 PF00478 IMP dehydrogenase / GMP reductase domain WU08_RS06325 PF02540 NAD synthase WU08_RS06325 PF00117 Glutamine amidotransferase class-I WU08_RS06325 PF00958 GMP synthase C terminal domain WU08_RS06340 PF13657 HipA N-terminal domain WU08_RS06340 PF07804 HipA-like C-terminal domain WU08_RS06350 PF07690 Major Facilitator Superfamily WU08_RS06365 PF01979 Amidohydrolase family WU08_RS06375 PF00005 ABC transporter WU08_RS06380 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS06405 PF01965 DJ-1/PfpI family WU08_RS06415 PF01740 STAS domain WU08_RS06415 PF00916 Sulfate permease family WU08_RS06420 PF00753 Metallo-beta-lactamase superfamily WU08_RS06420 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WU08_RS06420 PF10996 Beta-Casp domain WU08_RS06440 PF12706 Beta-lactamase superfamily domain WU08_RS06445 PF01965 DJ-1/PfpI family WU08_RS06445 PF12833 Helix-turn-helix domain WU08_RS06450 PF03466 LysR substrate binding domain WU08_RS06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS06465 PF08240 Alcohol dehydrogenase GroES-like domain WU08_RS06465 PF00107 Zinc-binding dehydrogenase WU08_RS06470 PF07690 Major Facilitator Superfamily WU08_RS06475 PF00155 Aminotransferase class I and II WU08_RS06475 PF00392 Bacterial regulatory proteins, gntR family WU08_RS06485 PF01810 LysE type translocator WU08_RS06500 PF07687 Peptidase dimerisation domain WU08_RS06500 PF01546 Peptidase family M20/M25/M40 WU08_RS06505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS06510 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS06515 PF12911 N-terminal TM domain of oligopeptide transport permease C WU08_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS06520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS06520 PF00005 ABC transporter WU08_RS06525 PF00356 Bacterial regulatory proteins, lacI family WU08_RS06555 PF09335 SNARE associated Golgi protein WU08_RS06570 PF13847 Methyltransferase domain WU08_RS06585 PF00392 Bacterial regulatory proteins, gntR family WU08_RS06585 PF00155 Aminotransferase class I and II WU08_RS06595 PF00692 dUTPase WU08_RS06610 PF01632 Ribosomal protein L35 WU08_RS06615 PF00453 Ribosomal protein L20 WU08_RS06620 PF01409 tRNA synthetases class II core domain (F) WU08_RS06620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WU08_RS06625 PF01588 Putative tRNA binding domain WU08_RS06625 PF03484 tRNA synthetase B5 domain WU08_RS06625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WU08_RS06625 PF03483 B3/4 domain WU08_RS06625 PF03147 Ferredoxin-fold anticodon binding domain WU08_RS06630 PF00216 Bacterial DNA-binding protein WU08_RS06680 PF04231 Endonuclease I WU08_RS06700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU08_RS06700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU08_RS06705 PF04381 Putative exonuclease, RdgC WU08_RS06715 PF02515 CoA-transferase family III WU08_RS06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS06720 PF03466 LysR substrate binding domain WU08_RS06740 PF00106 short chain dehydrogenase WU08_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS06755 PF00005 ABC transporter WU08_RS06755 PF08402 TOBE domain WU08_RS06760 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS06760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU08_RS06760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU08_RS06765 PF08946 Osmosensory transporter coiled coil WU08_RS06765 PF00083 Sugar (and other) transporter WU08_RS06770 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS06775 PF00072 Response regulator receiver domain WU08_RS06775 PF00486 Transcriptional regulatory protein, C terminal WU08_RS06780 PF00154 recA bacterial DNA recombination protein WU08_RS06785 PF02631 RecX family WU08_RS06790 PF03466 LysR substrate binding domain WU08_RS06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS06795 PF08267 Cobalamin-independent synthase, N-terminal domain WU08_RS06795 PF01717 Cobalamin-independent synthase, Catalytic domain WU08_RS06805 PF00549 CoA-ligase WU08_RS06805 PF08442 ATP-grasp domain WU08_RS06810 PF00549 CoA-ligase WU08_RS06810 PF02629 CoA binding domain WU08_RS06815 PF03741 Integral membrane protein TerC family WU08_RS06820 PF03741 Integral membrane protein TerC family WU08_RS06825 PF03900 Porphobilinogen deaminase, C-terminal domain WU08_RS06825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WU08_RS06845 PF00719 Inorganic pyrophosphatase WU08_RS06850 PF01557 Fumarylacetoacetate (FAA) hydrolase family WU08_RS06885 PF00263 Bacterial type II and III secretion system protein WU08_RS06885 PF04972 BON domain WU08_RS06885 PF13629 Pilus formation protein N terminal region WU08_RS06890 PF00437 Type II/IV secretion system protein WU08_RS06910 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS06915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WU08_RS06915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WU08_RS06920 PF02615 Malate/L-lactate dehydrogenase WU08_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS06925 PF03466 LysR substrate binding domain WU08_RS06935 PF01266 FAD dependent oxidoreductase WU08_RS06940 PF04267 Sarcosine oxidase, delta subunit family WU08_RS06945 PF08669 Glycine cleavage T-protein C-terminal barrel domain WU08_RS06945 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS06945 PF17806 Sarcosine oxidase A3 domain WU08_RS06945 PF01571 Aminomethyltransferase folate-binding domain WU08_RS06955 PF00551 Formyl transferase WU08_RS06960 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS06970 PF00561 alpha/beta hydrolase fold WU08_RS06980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WU08_RS06980 PF01565 FAD binding domain WU08_RS06985 PF05173 Dihydrodipicolinate reductase, C-terminus WU08_RS06985 PF01113 Dihydrodipicolinate reductase, N-terminus WU08_RS06990 PF04355 SmpA / OmlA family WU08_RS06995 PF01475 Ferric uptake regulator family WU08_RS07000 PF02463 RecF/RecN/SMC N terminal domain WU08_RS07005 PF01513 ATP-NAD kinase WU08_RS07010 PF01628 HrcA protein C terminal domain WU08_RS07010 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding WU08_RS07015 PF00762 Ferrochelatase WU08_RS07025 PF01025 GrpE WU08_RS07035 PF00012 Hsp70 protein WU08_RS07040 PF00684 DnaJ central domain WU08_RS07040 PF01556 DnaJ C terminal domain WU08_RS07040 PF00226 DnaJ domain WU08_RS07045 PF00675 Insulinase (Peptidase family M16) WU08_RS07045 PF05193 Peptidase M16 inactive domain WU08_RS07065 PF00004 ATPase family associated with various cellular activities (AAA) WU08_RS07065 PF01434 Peptidase family M41 WU08_RS07065 PF17862 AAA+ lid domain WU08_RS07075 PF00034 Cytochrome c WU08_RS07090 PF00180 Isocitrate/isopropylmalate dehydrogenase WU08_RS07110 PF00072 Response regulator receiver domain WU08_RS07110 PF00486 Transcriptional regulatory protein, C terminal WU08_RS07120 PF02669 K+-transporting ATPase, c chain WU08_RS07130 PF03814 Potassium-transporting ATPase A subunit WU08_RS07145 PF00474 Sodium:solute symporter family WU08_RS07160 PF00893 Small Multidrug Resistance protein WU08_RS07165 PF00488 MutS domain V WU08_RS07165 PF01713 Smr domain WU08_RS07170 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS07175 PF09397 Ftsk gamma domain WU08_RS07175 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WU08_RS07175 PF17854 FtsK alpha domain WU08_RS07175 PF01580 FtsK/SpoIIIE family WU08_RS07180 PF03548 Outer membrane lipoprotein carrier protein LolA WU08_RS07185 PF00004 ATPase family associated with various cellular activities (AAA) WU08_RS07185 PF12002 MgsA AAA+ ATPase C terminal WU08_RS07185 PF16193 AAA C-terminal domain WU08_RS07190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU08_RS07190 PF02403 Seryl-tRNA synthetase N-terminal domain WU08_RS07215 PF17151 Periplasmic sensor domain WU08_RS07215 PF00990 Diguanylate cyclase, GGDEF domain WU08_RS07230 PF07715 TonB-dependent Receptor Plug Domain WU08_RS07230 PF07660 Secretin and TonB N terminus short domain WU08_RS07230 PF00593 TonB dependent receptor WU08_RS07235 PF07690 Major Facilitator Superfamily WU08_RS07255 PF04183 IucA / IucC family WU08_RS07255 PF06276 Ferric iron reductase FhuF-like transporter WU08_RS07265 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) WU08_RS07275 PF02254 TrkA-N domain WU08_RS07275 PF00999 Sodium/hydrogen exchanger family WU08_RS07280 PF00106 short chain dehydrogenase WU08_RS07290 PF03883 Peroxide stress protein YaaA WU08_RS07310 PF00990 Diguanylate cyclase, GGDEF domain WU08_RS07320 PF04055 Radical SAM superfamily WU08_RS07320 PF06969 HemN C-terminal domain WU08_RS07330 PF00196 Bacterial regulatory proteins, luxR family WU08_RS07335 PF03129 Anticodon binding domain WU08_RS07335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WU08_RS07335 PF02824 TGS domain WU08_RS07335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU08_RS07340 PF05198 Translation initiation factor IF-3, N-terminal domain WU08_RS07340 PF00707 Translation initiation factor IF-3, C-terminal domain WU08_RS07345 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WU08_RS07345 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WU08_RS07355 PF00381 PTS HPr component phosphorylation site WU08_RS07360 PF00391 PEP-utilising enzyme, mobile domain WU08_RS07360 PF05524 PEP-utilising enzyme, N-terminal WU08_RS07360 PF02896 PEP-utilising enzyme, TIM barrel domain WU08_RS07370 PF02566 OsmC-like protein WU08_RS07375 PF02423 Ornithine cyclodeaminase/mu-crystallin family WU08_RS07385 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS07390 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS07395 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS07400 PF00005 ABC transporter WU08_RS07415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU08_RS07415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU08_RS07425 PF02293 AmiS/UreI family transporter WU08_RS07430 PF03069 Acetamidase/Formamidase family WU08_RS07445 PF01116 Fructose-bisphosphate aldolase class-II WU08_RS07455 PF01259 SAICAR synthetase WU08_RS07460 PF15723 Motility quorum-sensing regulator, toxin of MqsA WU08_RS07465 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA WU08_RS07475 PF02600 Disulfide bond formation protein DsbB WU08_RS07480 PF00731 AIR carboxylase WU08_RS07485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WU08_RS07485 PF02222 ATP-grasp domain WU08_RS07490 PF03481 Putative GTP-binding controlling metal-binding WU08_RS07490 PF01300 Telomere recombination WU08_RS07495 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS07500 PF01614 Bacterial transcriptional regulator WU08_RS07500 PF09339 IclR helix-turn-helix domain WU08_RS07505 PF00491 Arginase family WU08_RS07510 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS07520 PF00005 ABC transporter WU08_RS07525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS07525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS07535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS07535 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS07535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS07540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS07540 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS07540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS07545 PF03466 LysR substrate binding domain WU08_RS07550 PF00589 Phage integrase family WU08_RS07550 PF02899 Phage integrase, N-terminal SAM-like domain WU08_RS07555 PF04073 Aminoacyl-tRNA editing domain WU08_RS07560 PF01174 SNO glutamine amidotransferase family WU08_RS07575 PF00768 D-alanyl-D-alanine carboxypeptidase WU08_RS07585 PF07690 Major Facilitator Superfamily WU08_RS07595 PF13361 UvrD-like helicase C-terminal domain WU08_RS07595 PF12705 PD-(D/E)XK nuclease superfamily WU08_RS07595 PF00580 UvrD/REP helicase N-terminal domain WU08_RS07610 PF12170 DNA polymerase III tau subunit V interacting with alpha WU08_RS07610 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding WU08_RS07610 PF12169 DNA polymerase III subunits gamma and tau domain III WU08_RS07615 PF02575 YbaB/EbfC DNA-binding family WU08_RS07620 PF13662 Toprim domain WU08_RS07620 PF02132 RecR protein WU08_RS07640 PF04228 Putative neutral zinc metallopeptidase WU08_RS07645 PF01300 Telomere recombination WU08_RS07685 PF03358 NADPH-dependent FMN reductase WU08_RS07690 PF07311 Dodecin WU08_RS07695 PF01624 MutS domain I WU08_RS07695 PF00488 MutS domain V WU08_RS07695 PF05188 MutS domain II WU08_RS07695 PF05192 MutS domain III WU08_RS07695 PF05190 MutS family domain IV WU08_RS07700 PF08007 Cupin superfamily protein WU08_RS07705 PF16970 Type-1 fimbrial protein, A WU08_RS07710 PF06804 NlpB/DapX lipoprotein WU08_RS07715 PF00701 Dihydrodipicolinate synthetase family WU08_RS07720 PF02163 Peptidase family M50 WU08_RS07720 PF17820 PDZ domain WU08_RS07735 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS07745 PF00005 ABC transporter WU08_RS07750 PF04607 Region found in RelA / SpoT proteins WU08_RS07750 PF13291 ACT domain WU08_RS07750 PF02824 TGS domain WU08_RS07755 PF01192 RNA polymerase Rpb6 WU08_RS07760 PF00625 Guanylate kinase WU08_RS07765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU08_RS07770 PF00034 Cytochrome c WU08_RS07780 PF00877 NlpC/P60 family WU08_RS07785 PF01048 Phosphorylase superfamily WU08_RS07785 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus WU08_RS07805 PF08340 Domain of unknown function (DUF1732) WU08_RS07805 PF03755 YicC-like family, N-terminal region WU08_RS07810 PF03725 3' exoribonuclease family, domain 2 WU08_RS07810 PF01138 3' exoribonuclease family, domain 1 WU08_RS07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS07820 PF03466 LysR substrate binding domain WU08_RS07825 PF02203 Tar ligand binding domain homologue WU08_RS07825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU08_RS07825 PF00672 HAMP domain WU08_RS07830 PF00990 Diguanylate cyclase, GGDEF domain WU08_RS07830 PF17154 Gammaproteobacterial periplasmic sensor domain WU08_RS07830 PF00672 HAMP domain WU08_RS07830 PF00563 EAL domain WU08_RS07835 PF01725 Ham1 family WU08_RS07845 PF04055 Radical SAM superfamily WU08_RS07845 PF06969 HemN C-terminal domain WU08_RS07850 PF03951 Glutamine synthetase, beta-Grasp domain WU08_RS07850 PF00120 Glutamine synthetase, catalytic domain WU08_RS07855 PF00989 PAS fold WU08_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS07855 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS07860 PF00072 Response regulator receiver domain WU08_RS07860 PF02954 Bacterial regulatory protein, Fis family WU08_RS07860 PF00158 Sigma-54 interaction domain WU08_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS07865 PF03466 LysR substrate binding domain WU08_RS07870 PF17954 Quercetinase C-terminal cupin domain WU08_RS07870 PF02678 Pirin WU08_RS07875 PF02678 Pirin WU08_RS07875 PF05726 Pirin C-terminal cupin domain WU08_RS07885 PF08402 TOBE domain WU08_RS07885 PF00005 ABC transporter WU08_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS07900 PF00970 Oxidoreductase FAD-binding domain WU08_RS07900 PF00175 Oxidoreductase NAD-binding domain WU08_RS07905 PF03466 LysR substrate binding domain WU08_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS07915 PF00248 Aldo/keto reductase family WU08_RS07925 PF01042 Endoribonuclease L-PSP WU08_RS07930 PF17191 RecG wedge domain WU08_RS07930 PF00270 DEAD/DEAH box helicase WU08_RS07930 PF00271 Helicase conserved C-terminal domain WU08_RS07935 PF03466 LysR substrate binding domain WU08_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS07940 PF03466 LysR substrate binding domain WU08_RS07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS07945 PF00171 Aldehyde dehydrogenase family WU08_RS07950 PF00210 Ferritin-like domain WU08_RS07970 PF00535 Glycosyl transferase family 2 WU08_RS07980 PF00005 ABC transporter WU08_RS07990 PF00534 Glycosyl transferases group 1 WU08_RS08000 PF02563 Polysaccharide biosynthesis/export protein WU08_RS08005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU08_RS08005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU08_RS08005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU08_RS08010 PF01370 NAD dependent epimerase/dehydratase family WU08_RS08015 PF05159 Capsule polysaccharide biosynthesis protein WU08_RS08020 PF05159 Capsule polysaccharide biosynthesis protein WU08_RS08030 PF00106 short chain dehydrogenase WU08_RS08045 PF14759 Reductase C-terminal WU08_RS08045 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS08055 PF00005 ABC transporter WU08_RS08060 PF00005 ABC transporter WU08_RS08060 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS08065 PF02653 Branched-chain amino acid transport system / permease component WU08_RS08065 PF11862 Domain of unknown function (DUF3382) WU08_RS08075 PF03741 Integral membrane protein TerC family WU08_RS08085 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS08100 PF17863 AAA lid domain WU08_RS08100 PF07726 ATPase family associated with various cellular activities (AAA) WU08_RS08135 PF00884 Sulfatase WU08_RS08160 PF00072 Response regulator receiver domain WU08_RS08160 PF00196 Bacterial regulatory proteins, luxR family WU08_RS08165 PF12951 Passenger-associated-transport-repeat WU08_RS08165 PF00082 Subtilase family WU08_RS08165 PF03797 Autotransporter beta-domain WU08_RS08170 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA WU08_RS08175 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system WU08_RS08180 PF00043 Glutathione S-transferase, C-terminal domain WU08_RS08180 PF02798 Glutathione S-transferase, N-terminal domain WU08_RS08185 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WU08_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS08190 PF03466 LysR substrate binding domain WU08_RS08195 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS08205 PF01070 FMN-dependent dehydrogenase WU08_RS08210 PF01557 Fumarylacetoacetate (FAA) hydrolase family WU08_RS08225 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS08230 PF03466 LysR substrate binding domain WU08_RS08230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS08235 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS08260 PF03358 NADPH-dependent FMN reductase WU08_RS08280 PF07969 Amidohydrolase family WU08_RS08285 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS08295 PF03466 LysR substrate binding domain WU08_RS08310 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS08315 PF13244 Domain of unknown function (DUF4040) WU08_RS08315 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter WU08_RS08315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WU08_RS08315 PF00361 Proton-conducting membrane transporter WU08_RS08320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WU08_RS08325 PF00361 Proton-conducting membrane transporter WU08_RS08330 PF01899 Na+/H+ ion antiporter subunit WU08_RS08335 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) WU08_RS08360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU08_RS08365 PF02016 LD-carboxypeptidase N-terminal domain WU08_RS08365 PF17676 LD-carboxypeptidase C-terminal domain WU08_RS08370 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS08375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS08385 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS08390 PF00005 ABC transporter WU08_RS08390 PF12848 ABC transporter WU08_RS08395 PF00005 ABC transporter WU08_RS08425 PF00042 Globin WU08_RS08425 PF00175 Oxidoreductase NAD-binding domain WU08_RS08425 PF00970 Oxidoreductase FAD-binding domain WU08_RS08430 PF02082 Transcriptional regulator WU08_RS08435 PF01266 FAD dependent oxidoreductase WU08_RS08450 PF01571 Aminomethyltransferase folate-binding domain WU08_RS08455 PF02618 YceG-like family WU08_RS08460 PF02223 Thymidylate kinase WU08_RS08465 PF12169 DNA polymerase III subunits gamma and tau domain III WU08_RS08470 PF01026 TatD related DNase WU08_RS08485 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS08495 PF00005 ABC transporter WU08_RS08500 PF00491 Arginase family WU08_RS08505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WU08_RS08505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WU08_RS08510 PF00171 Aldehyde dehydrogenase family WU08_RS08515 PF07687 Peptidase dimerisation domain WU08_RS08515 PF01546 Peptidase family M20/M25/M40 WU08_RS08520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS08520 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS08520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS08530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS08530 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU08_RS08540 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS08540 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU08_RS08545 PF07729 FCD domain WU08_RS08545 PF00392 Bacterial regulatory proteins, gntR family WU08_RS08555 PF04343 Protein of unknown function, DUF488 WU08_RS08560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU08_RS08580 PF01425 Amidase WU08_RS08585 PF07286 Protein of unknown function (DUF1445) WU08_RS08595 PF00072 Response regulator receiver domain WU08_RS08595 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS08595 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS08595 PF01627 Hpt domain WU08_RS08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS08595 PF00989 PAS fold WU08_RS08600 PF00072 Response regulator receiver domain WU08_RS08600 PF00196 Bacterial regulatory proteins, luxR family WU08_RS08605 PF13332 Hemagglutinin repeat WU08_RS08605 PF05860 haemagglutination activity domain WU08_RS08605 PF05594 Haemagluttinin repeat WU08_RS08605 PF13018 Extended Signal Peptide of Type V secretion system WU08_RS08610 PF16970 Type-1 fimbrial protein, A WU08_RS08615 PF02753 Pili assembly chaperone PapD, C-terminal domain WU08_RS08615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain WU08_RS08620 PF13954 PapC N-terminal domain WU08_RS08620 PF00577 Outer membrane usher protein WU08_RS08620 PF13953 PapC C-terminal domain WU08_RS08625 PF00419 Fimbrial protein WU08_RS08630 PF17287 POTRA domain WU08_RS08630 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB WU08_RS08630 PF08479 POTRA domain, ShlB-type WU08_RS08645 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS08670 PF03466 LysR substrate binding domain WU08_RS08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS08680 PF05378 Hydantoinase/oxoprolinase N-terminal region WU08_RS08680 PF01968 Hydantoinase/oxoprolinase WU08_RS08695 PF00924 Mechanosensitive ion channel WU08_RS08695 PF05552 Conserved TM helix WU08_RS08705 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS08710 PF00588 SpoU rRNA Methylase family WU08_RS08715 PF00459 Inositol monophosphatase family WU08_RS08720 PF03471 Transporter associated domain WU08_RS08720 PF03741 Integral membrane protein TerC family WU08_RS08725 PF02673 Bacitracin resistance protein BacA WU08_RS08730 PF00149 Calcineurin-like phosphoesterase WU08_RS08735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WU08_RS08745 PF09190 DALR domain WU08_RS08745 PF01406 tRNA synthetases class I (C) catalytic domain WU08_RS08750 PF06029 AlkA N-terminal domain WU08_RS08750 PF02805 Metal binding domain of Ada WU08_RS08750 PF12833 Helix-turn-helix domain WU08_RS08750 PF00730 HhH-GPD superfamily base excision DNA repair protein WU08_RS08755 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit WU08_RS08765 PF09179 TilS substrate binding domain WU08_RS08765 PF01171 PP-loop family WU08_RS08770 PF13840 ACT domain WU08_RS08770 PF00696 Amino acid kinase family WU08_RS08770 PF01842 ACT domain WU08_RS08795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU08_RS08795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU08_RS08800 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU08_RS08800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS08805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS08810 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS08815 PF00561 alpha/beta hydrolase fold WU08_RS08820 PF03447 Homoserine dehydrogenase, NAD binding domain WU08_RS08820 PF01958 Domain of unknown function DUF108 WU08_RS08835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS08835 PF03466 LysR substrate binding domain WU08_RS08855 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS08860 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS08865 PF00005 ABC transporter WU08_RS08865 PF08402 TOBE domain WU08_RS08875 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS08875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WU08_RS08880 PF01614 Bacterial transcriptional regulator WU08_RS08880 PF09339 IclR helix-turn-helix domain WU08_RS08885 PF13380 CoA binding domain WU08_RS08890 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS08895 PF01042 Endoribonuclease L-PSP WU08_RS08920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WU08_RS08930 PF00535 Glycosyl transferase family 2 WU08_RS08935 PF14883 Hypothetical glycosyl hydrolase family 13 WU08_RS08935 PF01522 Polysaccharide deacetylase WU08_RS08955 PF12802 MarR family WU08_RS08960 PF00196 Bacterial regulatory proteins, luxR family WU08_RS08960 PF00072 Response regulator receiver domain WU08_RS08970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU08_RS08970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU08_RS08970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU08_RS08970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU08_RS08975 PF00342 Phosphoglucose isomerase WU08_RS08980 PF00132 Bacterial transferase hexapeptide (six repeats) WU08_RS08990 PF02146 Sir2 family WU08_RS08995 PF00459 Inositol monophosphatase family WU08_RS09000 PF00171 Aldehyde dehydrogenase family WU08_RS09005 PF00202 Aminotransferase class-III WU08_RS09010 PF00392 Bacterial regulatory proteins, gntR family WU08_RS09010 PF00155 Aminotransferase class I and II WU08_RS09020 PF00580 UvrD/REP helicase N-terminal domain WU08_RS09020 PF13361 UvrD-like helicase C-terminal domain WU08_RS09025 PF01544 CorA-like Mg2+ transporter protein WU08_RS09035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS09040 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS09045 PF12911 N-terminal TM domain of oligopeptide transport permease C WU08_RS09050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS09050 PF00005 ABC transporter WU08_RS09055 PF01047 MarR family WU08_RS09070 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB WU08_RS09070 PF08479 POTRA domain, ShlB-type WU08_RS09075 PF00563 EAL domain WU08_RS09075 PF00990 Diguanylate cyclase, GGDEF domain WU08_RS09075 PF03707 Bacterial signalling protein N terminal repeat WU08_RS09105 PF04972 BON domain WU08_RS09105 PF13629 Pilus formation protein N terminal region WU08_RS09105 PF00263 Bacterial type II and III secretion system protein WU08_RS09115 PF00437 Type II/IV secretion system protein WU08_RS09145 PF00072 Response regulator receiver domain WU08_RS09145 PF02954 Bacterial regulatory protein, Fis family WU08_RS09145 PF00158 Sigma-54 interaction domain WU08_RS09160 PF04542 Sigma-70 region 2 WU08_RS09160 PF08281 Sigma-70, region 4 WU08_RS09170 PF00034 Cytochrome c WU08_RS09175 PF01132 Elongation factor P (EF-P) OB domain WU08_RS09175 PF08207 Elongation factor P (EF-P) KOW-like domain WU08_RS09175 PF09285 Elongation factor P, C-terminal WU08_RS09190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase WU08_RS09195 PF00330 Aconitase family (aconitate hydratase) WU08_RS09195 PF00694 Aconitase C-terminal domain WU08_RS09205 PF00593 TonB dependent receptor WU08_RS09205 PF07715 TonB-dependent Receptor Plug Domain WU08_RS09220 PF00691 OmpA family WU08_RS09230 PF06434 Aconitate hydratase 2 N-terminus WU08_RS09230 PF00330 Aconitase family (aconitate hydratase) WU08_RS09230 PF11791 Aconitate B N-terminal domain WU08_RS09255 PF00892 EamA-like transporter family WU08_RS09260 PF01925 Sulfite exporter TauE/SafE WU08_RS09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS09285 PF03466 LysR substrate binding domain WU08_RS09290 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain WU08_RS09290 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain WU08_RS09300 PF03466 LysR substrate binding domain WU08_RS09300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS09345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU08_RS09345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU08_RS09350 PF01425 Amidase WU08_RS09360 PF00171 Aldehyde dehydrogenase family WU08_RS09375 PF13603 Leucyl-tRNA synthetase, Domain 2 WU08_RS09375 PF09334 tRNA synthetases class I (M) WU08_RS09375 PF00133 tRNA synthetases class I (I, L, M and V) WU08_RS09375 PF08264 Anticodon-binding domain of tRNA WU08_RS09380 PF07690 Major Facilitator Superfamily WU08_RS09385 PF01047 MarR family WU08_RS09405 PF01740 STAS domain WU08_RS09405 PF00916 Sulfate permease family WU08_RS09410 PF00471 Ribosomal protein L33 WU08_RS09415 PF00830 Ribosomal L28 family WU08_RS09420 PF07690 Major Facilitator Superfamily WU08_RS09440 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS09445 PF00005 ABC transporter WU08_RS09445 PF00571 CBS domain WU08_RS09450 PF01361 Tautomerase enzyme WU08_RS09455 PF00108 Thiolase, N-terminal domain WU08_RS09455 PF02803 Thiolase, C-terminal domain WU08_RS09465 PF00392 Bacterial regulatory proteins, gntR family WU08_RS09465 PF07729 FCD domain WU08_RS09475 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS09480 PF13193 AMP-binding enzyme C-terminal domain WU08_RS09480 PF00501 AMP-binding enzyme WU08_RS09485 PF13193 AMP-binding enzyme C-terminal domain WU08_RS09485 PF00501 AMP-binding enzyme WU08_RS09490 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS09495 PF00080 Copper/zinc superoxide dismutase (SODC) WU08_RS09510 PF00005 ABC transporter WU08_RS09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS09515 PF03459 TOBE domain WU08_RS09535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU08_RS09535 PF00529 HlyD membrane-fusion protein of T1SS WU08_RS09540 PF00873 AcrB/AcrD/AcrF family WU08_RS09545 PF08139 Prokaryotic membrane lipoprotein lipid attachment site WU08_RS09545 PF02321 Outer membrane efflux protein WU08_RS09550 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WU08_RS09555 PF01648 4'-phosphopantetheinyl transferase superfamily WU08_RS09560 PF00933 Glycosyl hydrolase family 3 N terminal domain WU08_RS09565 PF08459 UvrC Helix-hairpin-helix N-terminal WU08_RS09565 PF02151 UvrB/uvrC motif WU08_RS09565 PF01541 GIY-YIG catalytic domain WU08_RS09570 PF01066 CDP-alcohol phosphatidyltransferase WU08_RS09585 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term WU08_RS09585 PF14489 QueF-like protein WU08_RS09590 PF00463 Isocitrate lyase family WU08_RS09605 PF02653 Branched-chain amino acid transport system / permease component WU08_RS09605 PF11862 Domain of unknown function (DUF3382) WU08_RS09610 PF02653 Branched-chain amino acid transport system / permease component WU08_RS09615 PF13458 Periplasmic binding protein WU08_RS09620 PF00355 Rieske [2Fe-2S] domain WU08_RS09620 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WU08_RS09625 PF00866 Ring hydroxylating beta subunit WU08_RS09630 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS09640 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS09645 PF02515 CoA-transferase family III WU08_RS09650 PF07859 alpha/beta hydrolase fold WU08_RS09655 PF14535 AMP-binding enzyme C-terminal domain WU08_RS09655 PF00501 AMP-binding enzyme WU08_RS09660 PF02803 Thiolase, C-terminal domain WU08_RS09660 PF00108 Thiolase, N-terminal domain WU08_RS09680 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS09705 PF01152 Bacterial-like globin WU08_RS09750 PF01522 Polysaccharide deacetylase WU08_RS09755 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS09780 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS09780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU08_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS09805 PF03466 LysR substrate binding domain WU08_RS09815 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS09815 PF01799 [2Fe-2S] binding domain WU08_RS09820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU08_RS09830 PF12833 Helix-turn-helix domain WU08_RS09830 PF06719 AraC-type transcriptional regulator N-terminus WU08_RS09850 PF07690 Major Facilitator Superfamily WU08_RS09865 PF00583 Acetyltransferase (GNAT) family WU08_RS09875 PF00664 ABC transporter transmembrane region WU08_RS09875 PF00005 ABC transporter WU08_RS09885 PF02535 ZIP Zinc transporter WU08_RS09900 PF00916 Sulfate permease family WU08_RS09900 PF01740 STAS domain WU08_RS09920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WU08_RS09920 PF03625 Domain of unknown function DUF302 WU08_RS09930 PF02805 Metal binding domain of Ada WU08_RS09930 PF12833 Helix-turn-helix domain WU08_RS09935 PF07237 Protein of unknown function (DUF1428) WU08_RS09940 PF02567 Phenazine biosynthesis-like protein WU08_RS09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS09945 PF03466 LysR substrate binding domain WU08_RS09950 PF04286 Protein of unknown function (DUF445) WU08_RS09965 PF00171 Aldehyde dehydrogenase family WU08_RS09970 PF01590 GAF domain WU08_RS09970 PF00158 Sigma-54 interaction domain WU08_RS09970 PF02954 Bacterial regulatory protein, Fis family WU08_RS09990 PF03788 LrgA family WU08_RS09995 PF13649 Methyltransferase domain WU08_RS10005 PF00155 Aminotransferase class I and II WU08_RS10010 PF00202 Aminotransferase class-III WU08_RS10045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU08_RS10045 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP WU08_RS10050 PF12801 4Fe-4S binding domain WU08_RS10050 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase WU08_RS10050 PF13746 4Fe-4S dicluster domain WU08_RS10075 PF00005 ABC transporter WU08_RS10080 PF01061 ABC-2 type transporter WU08_RS10085 PF01594 AI-2E family transporter WU08_RS10120 PF04539 Sigma-70 region 3 WU08_RS10120 PF04542 Sigma-70 region 2 WU08_RS10120 PF00140 Sigma-70 factor, region 1.2 WU08_RS10120 PF03979 Sigma-70 factor, region 1.1 WU08_RS10120 PF04546 Sigma-70, non-essential region WU08_RS10120 PF04545 Sigma-70, region 4 WU08_RS10125 PF08278 DNA primase DnaG DnaB-binding WU08_RS10125 PF10410 DnaB-helicase binding domain of primase WU08_RS10125 PF08275 DNA primase catalytic core, N-terminal domain WU08_RS10125 PF01807 CHC2 zinc finger WU08_RS10130 PF01165 Ribosomal protein S21 WU08_RS10135 PF00156 Phosphoribosyl transferase domain WU08_RS10140 PF00709 Adenylosuccinate synthetase WU08_RS10145 PF13393 Histidyl-tRNA synthetase WU08_RS10150 PF01145 SPFH domain / Band 7 family WU08_RS10155 PF12221 Bacterial membrane protein N terminal WU08_RS10155 PF01145 SPFH domain / Band 7 family WU08_RS10160 PF16360 GTP-binding GTPase Middle Region WU08_RS10160 PF01926 50S ribosome-binding GTPase WU08_RS10160 PF13167 GTP-binding GTPase N-terminal WU08_RS10165 PF17209 Hfq protein WU08_RS10170 PF00155 Aminotransferase class I and II WU08_RS10175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WU08_RS10175 PF01926 50S ribosome-binding GTPase WU08_RS10180 PF13360 PQQ-like domain WU08_RS10185 PF09976 Tetratricopeptide repeat-like domain WU08_RS10190 PF03129 Anticodon binding domain WU08_RS10190 PF13393 Histidyl-tRNA synthetase WU08_RS10195 PF04551 GcpE protein WU08_RS10205 PF04055 Radical SAM superfamily WU08_RS10210 PF00334 Nucleoside diphosphate kinase WU08_RS10215 PF00133 tRNA synthetases class I (I, L, M and V) WU08_RS10215 PF10458 Valyl tRNA synthetase tRNA binding arm WU08_RS10215 PF08264 Anticodon-binding domain of tRNA WU08_RS10225 PF00486 Transcriptional regulatory protein, C terminal WU08_RS10225 PF00072 Response regulator receiver domain WU08_RS10230 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS10230 PF08521 Two-component sensor kinase N-terminal WU08_RS10250 PF00266 Aminotransferase class-V WU08_RS10255 PF01746 tRNA (Guanine-1)-methyltransferase WU08_RS10260 PF01782 RimM N-terminal domain WU08_RS10265 PF00886 Ribosomal protein S16 WU08_RS10275 PF01206 Sulfurtransferase TusA WU08_RS10280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WU08_RS10280 PF02272 DHHA1 domain WU08_RS10280 PF01411 tRNA synthetases class II (A) WU08_RS10325 PF01425 Amidase WU08_RS10330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS10330 PF00005 ABC transporter WU08_RS10335 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS10340 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS10345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS10365 PF03466 LysR substrate binding domain WU08_RS10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS10370 PF13416 Bacterial extracellular solute-binding protein WU08_RS10375 PF01266 FAD dependent oxidoreductase WU08_RS10380 PF00970 Oxidoreductase FAD-binding domain WU08_RS10380 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS10380 PF00175 Oxidoreductase NAD-binding domain WU08_RS10385 PF02261 Aspartate decarboxylase WU08_RS10400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WU08_RS10405 PF17042 Nucleotide-binding C-terminal domain WU08_RS10405 PF07005 Sugar-binding N-terminal domain WU08_RS10410 PF03812 2-keto-3-deoxygluconate permease WU08_RS10420 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS10430 PF02142 MGS-like domain WU08_RS10435 PF04384 Iron-sulphur cluster assembly WU08_RS10440 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS10445 PF00012 Hsp70 protein WU08_RS10450 PF07743 HSCB C-terminal oligomerisation domain WU08_RS10455 PF01521 Iron-sulphur cluster biosynthesis WU08_RS10460 PF01592 NifU-like N terminal domain WU08_RS10465 PF00266 Aminotransferase class-V WU08_RS10470 PF02082 Transcriptional regulator WU08_RS10475 PF01451 Low molecular weight phosphotyrosine protein phosphatase WU08_RS10480 PF00271 Helicase conserved C-terminal domain WU08_RS10480 PF04851 Type III restriction enzyme, res subunit WU08_RS10480 PF02151 UvrB/uvrC motif WU08_RS10480 PF12344 Ultra-violet resistance protein B WU08_RS10480 PF17757 UvrB interaction domain WU08_RS10485 PF00155 Aminotransferase class I and II WU08_RS10490 PF01726 LexA DNA binding domain WU08_RS10490 PF00717 Peptidase S24-like WU08_RS10495 PF03212 Pertactin WU08_RS10495 PF03797 Autotransporter beta-domain WU08_RS10520 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS10525 PF01144 Coenzyme A transferase WU08_RS10530 PF01144 Coenzyme A transferase WU08_RS10540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS10540 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS10540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS10550 PF02803 Thiolase, C-terminal domain WU08_RS10550 PF00108 Thiolase, N-terminal domain WU08_RS10560 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS10565 PF01575 MaoC like domain WU08_RS10570 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS10575 PF02515 CoA-transferase family III WU08_RS10580 PF03466 LysR substrate binding domain WU08_RS10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS10585 PF02190 ATP-dependent protease La (LON) substrate-binding domain WU08_RS10585 PF05362 Lon protease (S16) C-terminal proteolytic domain WU08_RS10585 PF00004 ATPase family associated with various cellular activities (AAA) WU08_RS10590 PF06689 ClpX C4-type zinc finger WU08_RS10590 PF10431 C-terminal, D2-small domain, of ClpB protein WU08_RS10590 PF07724 AAA domain (Cdc48 subfamily) WU08_RS10595 PF00574 Clp protease WU08_RS10600 PF05697 Bacterial trigger factor protein (TF) WU08_RS10600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WU08_RS10600 PF05698 Bacterial trigger factor protein (TF) C-terminus WU08_RS10605 PF03350 Uncharacterized protein family, UPF0114 WU08_RS10620 PF00313 'Cold-shock' DNA-binding domain WU08_RS10655 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WU08_RS10655 PF14602 Hexapeptide repeat of succinyl-transferase WU08_RS10655 PF00132 Bacterial transferase hexapeptide (six repeats) WU08_RS10660 PF07687 Peptidase dimerisation domain WU08_RS10660 PF01546 Peptidase family M20/M25/M40 WU08_RS10665 PF05175 Methyltransferase small domain WU08_RS10670 PF12848 ABC transporter WU08_RS10670 PF00005 ABC transporter WU08_RS10675 PF07715 TonB-dependent Receptor Plug Domain WU08_RS10680 PF13361 UvrD-like helicase C-terminal domain WU08_RS10680 PF00580 UvrD/REP helicase N-terminal domain WU08_RS10700 PF00551 Formyl transferase WU08_RS10705 PF01687 Riboflavin kinase WU08_RS10705 PF06574 FAD synthetase WU08_RS10710 PF00133 tRNA synthetases class I (I, L, M and V) WU08_RS10710 PF06827 Zinc finger found in FPG and IleRS WU08_RS10710 PF08264 Anticodon-binding domain of tRNA WU08_RS10715 PF01252 Signal peptidase (SPase) II WU08_RS10720 PF02441 Flavoprotein WU08_RS10720 PF04127 DNA / pantothenate metabolism flavoprotein WU08_RS10730 PF01037 Lrp/AsnC ligand binding domain WU08_RS10750 PF13406 Transglycosylase SLT domain WU08_RS10755 PF04305 Protein of unknown function (DUF455) WU08_RS10775 PF02875 Mur ligase family, glutamate ligase domain WU08_RS10775 PF08443 RimK-like ATP-grasp domain WU08_RS10775 PF08245 Mur ligase middle domain WU08_RS10780 PF08245 Mur ligase middle domain WU08_RS10780 PF02875 Mur ligase family, glutamate ligase domain WU08_RS10780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU08_RS10785 PF05532 CsbD-like WU08_RS10795 PF04972 BON domain WU08_RS10810 PF00005 ABC transporter WU08_RS10815 PF13472 GDSL-like Lipase/Acylhydrolase family WU08_RS10820 PF13145 PPIC-type PPIASE domain WU08_RS10825 PF03009 Glycerophosphoryl diester phosphodiesterase family WU08_RS10830 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ WU08_RS10835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU08_RS10835 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS10840 PF00462 Glutaredoxin WU08_RS10840 PF08534 Redoxin WU08_RS10850 PF00376 MerR family regulatory protein WU08_RS10850 PF09278 MerR, DNA binding WU08_RS10855 PF05958 tRNA (Uracil-5-)-methyltransferase WU08_RS10875 PF01476 LysM domain WU08_RS10875 PF01551 Peptidase family M23 WU08_RS10885 PF01975 Survival protein SurE WU08_RS10890 PF02660 Glycerol-3-phosphate acyltransferase WU08_RS10900 PF00814 Glycoprotease family WU08_RS10905 PF00860 Permease family WU08_RS10915 PF00085 Thioredoxin WU08_RS10920 PF01205 Uncharacterized protein family UPF0029 WU08_RS10930 PF00583 Acetyltransferase (GNAT) family WU08_RS10935 PF12802 MarR family WU08_RS10945 PF00202 Aminotransferase class-III WU08_RS10950 PF16868 NMT1-like family WU08_RS10970 PF03797 Autotransporter beta-domain WU08_RS10980 PF13396 Phospholipase_D-nuclease N-terminal WU08_RS10980 PF13091 PLD-like domain WU08_RS10985 PF01740 STAS domain WU08_RS10990 PF13581 Histidine kinase-like ATPase domain WU08_RS10995 PF01168 Alanine racemase, N-terminal domain WU08_RS10995 PF00842 Alanine racemase, C-terminal domain WU08_RS11005 PF07228 Stage II sporulation protein E (SpoIIE) WU08_RS11005 PF00672 HAMP domain WU08_RS11030 PF04542 Sigma-70 region 2 WU08_RS11030 PF08281 Sigma-70, region 4 WU08_RS11035 PF03958 Bacterial type II/III secretion system short domain WU08_RS11035 PF00263 Bacterial type II and III secretion system protein WU08_RS11045 PF01312 FlhB HrpN YscU SpaS Family WU08_RS11050 PF01311 Bacterial export proteins, family 1 WU08_RS11055 PF01313 Bacterial export proteins, family 3 WU08_RS11060 PF00813 FliP family WU08_RS11065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU08_RS11080 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU08_RS11080 PF18269 T3SS EscN ATPase C-terminal domain WU08_RS11080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU08_RS11085 PF02108 Flagellar assembly protein FliH WU08_RS11095 PF01514 Secretory protein of YscJ/FliF family WU08_RS11160 PF00771 FHIPEP family WU08_RS11190 PF01272 Transcription elongation factor, GreA/GreB, C-term WU08_RS11190 PF03449 Transcription elongation factor, N-terminal WU08_RS11195 PF00672 HAMP domain WU08_RS11195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU08_RS11195 PF02203 Tar ligand binding domain homologue WU08_RS11200 PF00860 Permease family WU08_RS11220 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS11230 PF13419 Haloacid dehalogenase-like hydrolase WU08_RS11235 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS11240 PF08402 TOBE domain WU08_RS11240 PF00005 ABC transporter WU08_RS11245 PF03466 LysR substrate binding domain WU08_RS11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS11255 PF00581 Rhodanese-like domain WU08_RS11265 PF01435 Peptidase family M48 WU08_RS11270 PF00107 Zinc-binding dehydrogenase WU08_RS11270 PF08240 Alcohol dehydrogenase GroES-like domain WU08_RS11275 PF00892 EamA-like transporter family WU08_RS11285 PF01047 MarR family WU08_RS11295 PF00529 HlyD membrane-fusion protein of T1SS WU08_RS11295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU08_RS11300 PF07690 Major Facilitator Superfamily WU08_RS11305 PF00180 Isocitrate/isopropylmalate dehydrogenase WU08_RS11310 PF00155 Aminotransferase class I and II WU08_RS11310 PF00392 Bacterial regulatory proteins, gntR family WU08_RS11315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS11325 PF12911 N-terminal TM domain of oligopeptide transport permease C WU08_RS11325 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS11330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS11330 PF00005 ABC transporter WU08_RS11340 PF00202 Aminotransferase class-III WU08_RS11345 PF07883 Cupin domain WU08_RS11350 PF00850 Histone deacetylase domain WU08_RS11355 PF01546 Peptidase family M20/M25/M40 WU08_RS11355 PF07687 Peptidase dimerisation domain WU08_RS11365 PF00171 Aldehyde dehydrogenase family WU08_RS11370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU08_RS11375 PF00202 Aminotransferase class-III WU08_RS11380 PF01235 Sodium:alanine symporter family WU08_RS11385 PF05872 Bacterial protein of unknown function (DUF853) WU08_RS11390 PF01709 Transcriptional regulator WU08_RS11395 PF02843 Phosphoribosylglycinamide synthetase, C domain WU08_RS11395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WU08_RS11395 PF02844 Phosphoribosylglycinamide synthetase, N domain WU08_RS11400 PF01218 Coproporphyrinogen III oxidase WU08_RS11405 PF01467 Cytidylyltransferase-like WU08_RS11415 PF02590 Predicted SPOUT methyltransferase WU08_RS11420 PF02545 Maf-like protein WU08_RS11425 PF03797 Autotransporter beta-domain WU08_RS11425 PF03212 Pertactin WU08_RS11465 PF00575 S1 RNA binding domain WU08_RS11465 PF10150 Ribonuclease E/G family WU08_RS11470 PF01842 ACT domain WU08_RS11470 PF00800 Prephenate dehydratase WU08_RS11480 PF07690 Major Facilitator Superfamily WU08_RS11485 PF00005 ABC transporter WU08_RS11485 PF00664 ABC transporter transmembrane region WU08_RS11490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WU08_RS11500 PF03692 Putative zinc- or iron-chelating domain WU08_RS11515 PF00884 Sulfatase WU08_RS11520 PF00534 Glycosyl transferases group 1 WU08_RS11520 PF13439 Glycosyltransferase Family 4 WU08_RS11525 PF00535 Glycosyl transferase family 2 WU08_RS11530 PF01522 Polysaccharide deacetylase WU08_RS11535 PF00534 Glycosyl transferases group 1 WU08_RS11535 PF13439 Glycosyltransferase Family 4 WU08_RS11540 PF01336 OB-fold nucleic acid binding domain WU08_RS11540 PF14579 Helix-hairpin-helix motif WU08_RS11540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WU08_RS11540 PF07733 Bacterial DNA polymerase III alpha NTPase domain WU08_RS11540 PF02811 PHP domain WU08_RS11550 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold WU08_RS11550 PF11898 Domain of unknown function (DUF3418) WU08_RS11550 PF04408 Helicase associated domain (HA2) WU08_RS11550 PF00270 DEAD/DEAH box helicase WU08_RS11550 PF00271 Helicase conserved C-terminal domain WU08_RS11555 PF00583 Acetyltransferase (GNAT) family WU08_RS11555 PF00696 Amino acid kinase family WU08_RS11560 PF04362 Bacterial Fe(2+) trafficking WU08_RS11565 PF05506 Domain of unknown function (DUF756) WU08_RS11565 PF04185 Phosphoesterase family WU08_RS11570 PF01895 PhoU domain WU08_RS11575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WU08_RS11580 PF18158 Adaptive response protein AidB N-terminal domain WU08_RS11580 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS11580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS11585 PF02646 RmuC family WU08_RS11595 PF02245 Methylpurine-DNA glycosylase (MPG) WU08_RS11605 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS11615 PF00005 ABC transporter WU08_RS11615 PF08402 TOBE domain WU08_RS11620 PF13416 Bacterial extracellular solute-binding protein WU08_RS11640 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS11650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS11650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU08_RS11670 PF00285 Citrate synthase, C-terminal domain WU08_RS11675 PF03937 Flavinator of succinate dehydrogenase WU08_RS11680 PF13085 2Fe-2S iron-sulfur cluster binding domain WU08_RS11685 PF02910 Fumarate reductase flavoprotein C-term WU08_RS11685 PF00890 FAD binding domain WU08_RS11690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WU08_RS11695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WU08_RS11700 PF07702 UTRA domain WU08_RS11700 PF00392 Bacterial regulatory proteins, gntR family WU08_RS11705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WU08_RS11705 PF00056 lactate/malate dehydrogenase, NAD binding domain WU08_RS11715 PF00285 Citrate synthase, C-terminal domain WU08_RS11720 PF00694 Aconitase C-terminal domain WU08_RS11720 PF00330 Aconitase family (aconitate hydratase) WU08_RS11725 PF04303 PrpF protein WU08_RS11730 PF03972 MmgE/PrpD family WU08_RS11735 PF03653 Uncharacterised protein family (UPF0093) WU08_RS11740 PF01170 Putative RNA methylase family UPF0020 WU08_RS11740 PF02926 THUMP domain WU08_RS11760 PF13193 AMP-binding enzyme C-terminal domain WU08_RS11760 PF16177 Acetyl-coenzyme A synthetase N-terminus WU08_RS11760 PF00501 AMP-binding enzyme WU08_RS11770 PF01430 Hsp33 protein WU08_RS11795 PF00211 Adenylate and Guanylate cyclase catalytic domain WU08_RS11800 PF04977 Septum formation initiator WU08_RS11805 PF03952 Enolase, N-terminal domain WU08_RS11805 PF00113 Enolase, C-terminal TIM barrel domain WU08_RS11815 PF00793 DAHP synthetase I family WU08_RS11820 PF00117 Glutamine amidotransferase class-I WU08_RS11820 PF06418 CTP synthase N-terminus WU08_RS11830 PF01321 Creatinase/Prolidase N-terminal domain WU08_RS11830 PF00557 Metallopeptidase family M24 WU08_RS11840 PF03576 Peptidase family S58 WU08_RS11845 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS11845 PF12911 N-terminal TM domain of oligopeptide transport permease C WU08_RS11850 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS11855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS11860 PF00005 ABC transporter WU08_RS11860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS11865 PF01112 Asparaginase WU08_RS11875 PF01144 Coenzyme A transferase WU08_RS11895 PF16363 GDP-mannose 4,6 dehydratase WU08_RS11910 PF01212 Beta-eliminating lyase WU08_RS11915 PF00892 EamA-like transporter family WU08_RS11920 PF00501 AMP-binding enzyme WU08_RS11920 PF16177 Acetyl-coenzyme A synthetase N-terminus WU08_RS11920 PF13193 AMP-binding enzyme C-terminal domain WU08_RS11930 PF03928 Haem-degrading WU08_RS11935 PF00501 AMP-binding enzyme WU08_RS11935 PF16177 Acetyl-coenzyme A synthetase N-terminus WU08_RS11935 PF13193 AMP-binding enzyme C-terminal domain WU08_RS11940 PF16177 Acetyl-coenzyme A synthetase N-terminus WU08_RS11940 PF00501 AMP-binding enzyme WU08_RS11940 PF13193 AMP-binding enzyme C-terminal domain WU08_RS11945 PF00877 NlpC/P60 family WU08_RS11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS11960 PF03466 LysR substrate binding domain WU08_RS11965 PF00171 Aldehyde dehydrogenase family WU08_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS11975 PF03466 LysR substrate binding domain WU08_RS11985 PF02789 Cytosol aminopeptidase family, N-terminal domain WU08_RS11985 PF00883 Cytosol aminopeptidase family, catalytic domain WU08_RS11990 PF04364 DNA polymerase III chi subunit, HolC WU08_RS12000 PF01027 Inhibitor of apoptosis-promoting Bax1 WU08_RS12005 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS12015 PF00291 Pyridoxal-phosphate dependent enzyme WU08_RS12025 PF11967 Recombination protein O N terminal WU08_RS12025 PF02565 Recombination protein O C terminal WU08_RS12030 PF01926 50S ribosome-binding GTPase WU08_RS12030 PF07650 KH domain WU08_RS12035 PF14622 Ribonuclease-III-like WU08_RS12035 PF00035 Double-stranded RNA binding motif WU08_RS12040 PF10502 Signal peptidase, peptidase S26 WU08_RS12045 PF00009 Elongation factor Tu GTP binding domain WU08_RS12045 PF00679 Elongation factor G C-terminus WU08_RS12045 PF03144 Elongation factor Tu domain 2 WU08_RS12045 PF06421 GTP-binding protein LepA C-terminus WU08_RS12050 PF13180 PDZ domain WU08_RS12065 PF08281 Sigma-70, region 4 WU08_RS12065 PF04542 Sigma-70 region 2 WU08_RS12075 PF02801 Beta-ketoacyl synthase, C-terminal domain WU08_RS12075 PF00109 Beta-ketoacyl synthase, N-terminal domain WU08_RS12080 PF00550 Phosphopantetheine attachment site WU08_RS12090 PF00698 Acyl transferase domain WU08_RS12095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WU08_RS12095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WU08_RS12100 PF02504 Fatty acid synthesis protein WU08_RS12105 PF01783 Ribosomal L32p protein family WU08_RS12110 PF02620 Large ribosomal RNA subunit accumulation protein YceD WU08_RS12115 PF02545 Maf-like protein WU08_RS12125 PF01510 N-acetylmuramoyl-L-alanine amidase WU08_RS12130 PF12805 FUSC-like inner membrane protein yccS WU08_RS12140 PF03883 Peroxide stress protein YaaA WU08_RS12155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase WU08_RS12160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS12170 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS12175 PF01416 tRNA pseudouridine synthase WU08_RS12185 PF01118 Semialdehyde dehydrogenase, NAD binding domain WU08_RS12185 PF02774 Semialdehyde dehydrogenase, dimerisation domain WU08_RS12190 PF00180 Isocitrate/isopropylmalate dehydrogenase WU08_RS12195 PF00694 Aconitase C-terminal domain WU08_RS12200 PF00330 Aconitase family (aconitate hydratase) WU08_RS12205 PF12849 PBP superfamily domain WU08_RS12210 PF00005 ABC transporter WU08_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS12240 PF13247 4Fe-4S dicluster domain WU08_RS12245 PF00384 Molybdopterin oxidoreductase WU08_RS12245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WU08_RS12245 PF01568 Molydopterin dinucleotide binding domain WU08_RS12275 PF10609 NUBPL iron-transfer P-loop NTPase WU08_RS12280 PF12804 MobA-like NTP transferase domain WU08_RS12285 PF00994 Probable molybdopterin binding domain WU08_RS12285 PF03454 MoeA C-terminal region (domain IV) WU08_RS12285 PF03453 MoeA N-terminal region (domain I and II) WU08_RS12290 PF03205 Molybdopterin guanine dinucleotide synthesis protein B WU08_RS12295 PF01435 Peptidase family M48 WU08_RS12300 PF01264 Chorismate synthase WU08_RS12305 PF00563 EAL domain WU08_RS12305 PF08448 PAS fold WU08_RS12305 PF08447 PAS fold WU08_RS12305 PF00990 Diguanylate cyclase, GGDEF domain WU08_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS12325 PF00005 ABC transporter WU08_RS12325 PF08402 TOBE domain WU08_RS12330 PF03466 LysR substrate binding domain WU08_RS12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS12335 PF00300 Histidine phosphatase superfamily (branch 1) WU08_RS12345 PF02142 MGS-like domain WU08_RS12345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU08_RS12345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WU08_RS12350 PF00117 Glutamine amidotransferase class-I WU08_RS12350 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WU08_RS12355 PF00923 Transaldolase/Fructose-6-phosphate aldolase WU08_RS12375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU08_RS12375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU08_RS12380 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS12385 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS12385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS12385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS12390 PF03658 RnfH family Ubiquitin WU08_RS12395 PF03364 Polyketide cyclase / dehydrase and lipid transport WU08_RS12405 PF01668 SmpB protein WU08_RS12410 PF08448 PAS fold WU08_RS12410 PF00990 Diguanylate cyclase, GGDEF domain WU08_RS12415 PF16200 C-terminal region of band_7 WU08_RS12415 PF01145 SPFH domain / Band 7 family WU08_RS12430 PF00958 GMP synthase C terminal domain WU08_RS12430 PF00117 Glutamine amidotransferase class-I WU08_RS12435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WU08_RS12435 PF02896 PEP-utilising enzyme, TIM barrel domain WU08_RS12435 PF00391 PEP-utilising enzyme, mobile domain WU08_RS12440 PF03618 Kinase/pyrophosphorylase WU08_RS12445 PF00588 SpoU rRNA Methylase family WU08_RS12445 PF08032 RNA 2'-O ribose methyltransferase substrate binding WU08_RS12450 PF01351 Ribonuclease HII WU08_RS12455 PF02684 Lipid-A-disaccharide synthetase WU08_RS12460 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 WU08_RS12460 PF00132 Bacterial transferase hexapeptide (six repeats) WU08_RS12465 PF07977 FabA-like domain WU08_RS12470 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD WU08_RS12470 PF00132 Bacterial transferase hexapeptide (six repeats) WU08_RS12475 PF03938 Outer membrane protein (OmpH-like) WU08_RS12480 PF07244 Surface antigen variable number repeat WU08_RS12480 PF01103 Surface antigen WU08_RS12485 PF02163 Peptidase family M50 WU08_RS12485 PF17820 PDZ domain WU08_RS12490 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WU08_RS12490 PF13288 DXP reductoisomerase C-terminal domain WU08_RS12490 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WU08_RS12500 PF01255 Putative undecaprenyl diphosphate synthase WU08_RS12505 PF01765 Ribosome recycling factor WU08_RS12510 PF00696 Amino acid kinase family WU08_RS12515 PF00889 Elongation factor TS WU08_RS12520 PF00318 Ribosomal protein S2 WU08_RS12525 PF00557 Metallopeptidase family M24 WU08_RS12530 PF08335 GlnD PII-uridylyltransferase WU08_RS12530 PF01909 Nucleotidyltransferase domain WU08_RS12530 PF01966 HD domain WU08_RS12545 PF00156 Phosphoribosyl transferase domain WU08_RS12560 PF02875 Mur ligase family, glutamate ligase domain WU08_RS12560 PF08245 Mur ligase middle domain WU08_RS12570 PF07195 Flagellar hook-associated protein 2 C-terminus WU08_RS12570 PF07196 Flagellin hook IN motif WU08_RS12570 PF02465 Flagellar hook-associated protein 2 N-terminus WU08_RS12575 PF02561 Flagellar protein FliS WU08_RS12595 PF01312 FlhB HrpN YscU SpaS Family WU08_RS12605 PF02049 Flagellar hook-basal body complex protein FliE WU08_RS12610 PF08345 Flagellar M-ring protein C-terminal WU08_RS12610 PF01514 Secretory protein of YscJ/FliF family WU08_RS12615 PF01706 FliG C-terminal domain WU08_RS12615 PF14842 FliG N-terminal domain WU08_RS12615 PF14841 FliG middle domain WU08_RS12625 PF18269 T3SS EscN ATPase C-terminal domain WU08_RS12625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU08_RS12650 PF03748 Flagellar basal body-associated protein FliL WU08_RS12655 PF02154 Flagellar motor switch protein FliM WU08_RS12655 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU08_RS12660 PF16973 Flagellar motor switch protein FliN N-terminal WU08_RS12660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU08_RS12665 PF04347 Flagellar biosynthesis protein, FliO WU08_RS12670 PF00813 FliP family WU08_RS12675 PF01313 Bacterial export proteins, family 3 WU08_RS12680 PF01311 Bacterial export proteins, family 1 WU08_RS12690 PF08447 PAS fold WU08_RS12690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU08_RS12695 PF02203 Tar ligand binding domain homologue WU08_RS12695 PF00672 HAMP domain WU08_RS12695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU08_RS12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU08_RS12700 PF00672 HAMP domain WU08_RS12700 PF02203 Tar ligand binding domain homologue WU08_RS12705 PF00669 Bacterial flagellin N-terminal helical region WU08_RS12710 PF00460 Flagella basal body rod protein WU08_RS12710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU08_RS12715 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase WU08_RS12715 PF10135 Rod binding protein WU08_RS12720 PF02119 Flagellar P-ring protein WU08_RS12725 PF02107 Flagellar L-ring protein WU08_RS12730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU08_RS12730 PF00460 Flagella basal body rod protein WU08_RS12735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU08_RS12735 PF00460 Flagella basal body rod protein WU08_RS12740 PF00460 Flagella basal body rod protein WU08_RS12740 PF07559 Flagellar basal body protein FlaE WU08_RS12740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU08_RS12745 PF03963 Flagellar hook capping protein - N-terminal region WU08_RS12745 PF13861 FlgD Tudor-like domain WU08_RS12745 PF13860 FlgD Ig-like domain WU08_RS12750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU08_RS12750 PF00460 Flagella basal body rod protein WU08_RS12755 PF00460 Flagella basal body rod protein WU08_RS12765 PF04316 Anti-sigma-28 factor, FlgM WU08_RS12775 PF00448 SRP54-type protein, GTPase domain WU08_RS12785 PF01312 FlhB HrpN YscU SpaS Family WU08_RS12795 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS12800 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS12805 PF00005 ABC transporter WU08_RS12815 PF02558 Ketopantoate reductase PanE/ApbA WU08_RS12815 PF08546 Ketopantoate reductase PanE/ApbA C terminal WU08_RS12820 PF13378 Enolase C-terminal domain-like WU08_RS12825 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS12835 PF00694 Aconitase C-terminal domain WU08_RS12840 PF00356 Bacterial regulatory proteins, lacI family WU08_RS12845 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS12850 PF02515 CoA-transferase family III WU08_RS12860 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS12865 PF13607 Succinyl-CoA ligase like flavodoxin domain WU08_RS12865 PF13380 CoA binding domain WU08_RS12870 PF07729 FCD domain WU08_RS12870 PF00392 Bacterial regulatory proteins, gntR family WU08_RS12875 PF03328 HpcH/HpaI aldolase/citrate lyase family WU08_RS12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS12885 PF03466 LysR substrate binding domain WU08_RS12895 PF12951 Passenger-associated-transport-repeat WU08_RS12905 PF03551 Transcriptional regulator PadR-like family WU08_RS12915 PF03372 Endonuclease/Exonuclease/phosphatase family WU08_RS12920 PF13091 PLD-like domain WU08_RS12935 PF03706 Lysylphosphatidylglycerol synthase TM region WU08_RS12965 PF00128 Alpha amylase, catalytic domain WU08_RS12965 PF11896 Domain of unknown function (DUF3416) WU08_RS12970 PF16657 Maltogenic Amylase, C-terminal domain WU08_RS12970 PF00128 Alpha amylase, catalytic domain WU08_RS12975 PF02806 Alpha amylase, C-terminal all-beta domain WU08_RS12975 PF00128 Alpha amylase, catalytic domain WU08_RS12975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU08_RS12980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU08_RS12980 PF00128 Alpha amylase, catalytic domain WU08_RS12985 PF11941 Domain of unknown function (DUF3459) WU08_RS12985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU08_RS12985 PF00128 Alpha amylase, catalytic domain WU08_RS12995 PF00128 Alpha amylase, catalytic domain WU08_RS13005 PF08543 Phosphomethylpyrimidine kinase WU08_RS13010 PF01168 Alanine racemase, N-terminal domain WU08_RS13015 PF00155 Aminotransferase class I and II WU08_RS13015 PF00392 Bacterial regulatory proteins, gntR family WU08_RS13030 PF00582 Universal stress protein family WU08_RS13035 PF00248 Aldo/keto reductase family WU08_RS13045 PF01447 Thermolysin metallopeptidase, catalytic domain WU08_RS13045 PF02868 Thermolysin metallopeptidase, alpha-helical domain WU08_RS13045 PF16485 Protealysin propeptide WU08_RS13050 PF07681 DoxX WU08_RS13070 PF00578 AhpC/TSA family WU08_RS13075 PF03960 ArsC family WU08_RS13080 PF02515 CoA-transferase family III WU08_RS13100 PF00255 Glutathione peroxidase WU08_RS13105 PF00043 Glutathione S-transferase, C-terminal domain WU08_RS13105 PF02798 Glutathione S-transferase, N-terminal domain WU08_RS13130 PF02666 Phosphatidylserine decarboxylase WU08_RS13135 PF01070 FMN-dependent dehydrogenase WU08_RS13140 PF03180 NLPA lipoprotein WU08_RS13145 PF08808 RES domain WU08_RS13155 PF04241 Protein of unknown function (DUF423) WU08_RS13175 PF13458 Periplasmic binding protein WU08_RS13180 PF00005 ABC transporter WU08_RS13180 PF17912 MalK OB fold domain WU08_RS13185 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS13190 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS13195 PF13416 Bacterial extracellular solute-binding protein WU08_RS13200 PF14748 Pyrroline-5-carboxylate reductase dimerisation WU08_RS13200 PF03807 NADP oxidoreductase coenzyme F420-dependent WU08_RS13205 PF02592 Putative vitamin uptake transporter WU08_RS13215 PF13458 Periplasmic binding protein WU08_RS13220 PF02653 Branched-chain amino acid transport system / permease component WU08_RS13225 PF11862 Domain of unknown function (DUF3382) WU08_RS13225 PF02653 Branched-chain amino acid transport system / permease component WU08_RS13230 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS13230 PF00005 ABC transporter WU08_RS13235 PF00005 ABC transporter WU08_RS13240 PF01177 Asp/Glu/Hydantoin racemase WU08_RS13255 PF00892 EamA-like transporter family WU08_RS13265 PF04235 Protein of unknown function (DUF418) WU08_RS13270 PF00521 DNA gyrase/topoisomerase IV, subunit A WU08_RS13280 PF01751 Toprim domain WU08_RS13280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS13280 PF00986 DNA gyrase B subunit, carboxyl terminus WU08_RS13280 PF00204 DNA gyrase B WU08_RS13285 PF00085 Thioredoxin WU08_RS13290 PF07498 Rho termination factor, N-terminal domain WU08_RS13290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU08_RS13290 PF07497 Rho termination factor, RNA-binding domain WU08_RS13300 PF08335 GlnD PII-uridylyltransferase WU08_RS13300 PF03710 Glutamate-ammonia ligase adenylyltransferase WU08_RS13305 PF02677 Epoxyqueuosine reductase QueH WU08_RS13310 PF03315 Serine dehydratase beta chain WU08_RS13310 PF03313 Serine dehydratase alpha chain WU08_RS13315 PF02690 Na+/Pi-cotransporter WU08_RS13320 PF01738 Dienelactone hydrolase family WU08_RS13330 PF01612 3'-5' exonuclease WU08_RS13330 PF00476 DNA polymerase family A WU08_RS13330 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WU08_RS13330 PF01367 5'-3' exonuclease, C-terminal SAM fold WU08_RS13335 PF03641 Possible lysine decarboxylase WU08_RS13350 PF03144 Elongation factor Tu domain 2 WU08_RS13350 PF00009 Elongation factor Tu GTP binding domain WU08_RS13350 PF00679 Elongation factor G C-terminus WU08_RS13355 PF01509 TruB family pseudouridylate synthase (N terminal domain) WU08_RS13355 PF16198 tRNA pseudouridylate synthase B C-terminal domain WU08_RS13360 PF02033 Ribosome-binding factor A WU08_RS13365 PF11987 Translation-initiation factor 2 WU08_RS13365 PF08364 Bacterial translation initiation factor IF-2 associated region WU08_RS13365 PF04760 Translation initiation factor IF-2, N-terminal region WU08_RS13365 PF00009 Elongation factor Tu GTP binding domain WU08_RS13370 PF08529 NusA N-terminal domain WU08_RS13370 PF13184 NusA-like KH domain WU08_RS13375 PF17384 RimP C-terminal SH3 domain WU08_RS13375 PF02576 RimP N-terminal domain WU08_RS13380 PF00849 RNA pseudouridylate synthase WU08_RS13380 PF01479 S4 domain WU08_RS13385 PF04079 Segregation and condensation complex subunit ScpB WU08_RS13395 PF03466 LysR substrate binding domain WU08_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS13400 PF00881 Nitroreductase family WU08_RS13405 PF07683 Cobalamin synthesis protein cobW C-terminal domain WU08_RS13405 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU08_RS13425 PF14497 Glutathione S-transferase, C-terminal domain WU08_RS13425 PF02798 Glutathione S-transferase, N-terminal domain WU08_RS13430 PF02401 LytB protein WU08_RS13435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WU08_RS13440 PF04002 RadC-like JAB domain WU08_RS13445 PF04199 Putative cyclase WU08_RS13450 PF03301 Tryptophan 2,3-dioxygenase WU08_RS13455 PF01197 Ribosomal protein L31 WU08_RS13465 PF01554 MatE WU08_RS13480 PF18073 Rubredoxin metal binding domain WU08_RS13485 PF12450 von Willebrand factor WU08_RS13485 PF00092 von Willebrand factor type A domain WU08_RS13485 PF12034 Domain of unknown function (DUF3520) WU08_RS13490 PF04542 Sigma-70 region 2 WU08_RS13490 PF04545 Sigma-70, region 4 WU08_RS13510 PF01168 Alanine racemase, N-terminal domain WU08_RS13510 PF00842 Alanine racemase, C-terminal domain WU08_RS13525 PF01593 Flavin containing amine oxidoreductase WU08_RS13525 PF01593 Flavin containing amine oxidoreductase WU08_RS13530 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WU08_RS13540 PF01061 ABC-2 type transporter WU08_RS13545 PF00005 ABC transporter WU08_RS13565 PF02424 ApbE family WU08_RS13570 PF00175 Oxidoreductase NAD-binding domain WU08_RS13570 PF00258 Flavodoxin WU08_RS13570 PF00667 FAD binding domain WU08_RS13580 PF07969 Amidohydrolase family WU08_RS13585 PF03466 LysR substrate binding domain WU08_RS13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS13595 PF09370 Phosphoenolpyruvate hydrolase-like WU08_RS13610 PF03797 Autotransporter beta-domain WU08_RS13610 PF03212 Pertactin WU08_RS13615 PF03797 Autotransporter beta-domain WU08_RS13615 PF03212 Pertactin WU08_RS13630 PF07724 AAA domain (Cdc48 subfamily) WU08_RS13630 PF17871 AAA lid domain WU08_RS13630 PF02861 Clp amino terminal domain, pathogenicity island component WU08_RS13630 PF00004 ATPase family associated with various cellular activities (AAA) WU08_RS13630 PF10431 C-terminal, D2-small domain, of ClpB protein WU08_RS13635 PF00027 Cyclic nucleotide-binding domain WU08_RS13635 PF13545 Crp-like helix-turn-helix domain WU08_RS13650 PF00293 NUDIX domain WU08_RS13655 PF12843 Putative quorum-sensing-regulated virulence factor WU08_RS13665 PF08281 Sigma-70, region 4 WU08_RS13665 PF12680 SnoaL-like domain WU08_RS13665 PF04542 Sigma-70 region 2 WU08_RS13670 PF02627 Carboxymuconolactone decarboxylase family WU08_RS13700 PF00155 Aminotransferase class I and II WU08_RS13705 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS13710 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS13715 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS13720 PF00005 ABC transporter WU08_RS13745 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WU08_RS13770 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS13775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU08_RS13775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU08_RS13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS13780 PF03466 LysR substrate binding domain WU08_RS13790 PF17676 LD-carboxypeptidase C-terminal domain WU08_RS13790 PF02016 LD-carboxypeptidase N-terminal domain WU08_RS13805 PF07690 Major Facilitator Superfamily WU08_RS13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS13815 PF03466 LysR substrate binding domain WU08_RS13820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain WU08_RS13820 PF13378 Enolase C-terminal domain-like WU08_RS13825 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS13845 PF02567 Phenazine biosynthesis-like protein WU08_RS13855 PF03239 Iron permease FTR1 family WU08_RS13865 PF10634 Fe2+ transport protein WU08_RS13870 PF07879 PHB/PHA accumulation regulator DNA-binding domain WU08_RS13870 PF05233 PHB accumulation regulatory domain WU08_RS13875 PF00106 short chain dehydrogenase WU08_RS13880 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus WU08_RS13885 PF02578 Multi-copper polyphenol oxidoreductase laccase WU08_RS13890 PF01479 S4 domain WU08_RS13890 PF00849 RNA pseudouridylate synthase WU08_RS13895 PF13525 Outer membrane lipoprotein WU08_RS13900 PF13307 Helicase C-terminal domain WU08_RS13900 PF04851 Type III restriction enzyme, res subunit WU08_RS13905 PF16921 Tex protein YqgF-like domain WU08_RS13905 PF09371 Tex-like protein N-terminal domain WU08_RS13905 PF00575 S1 RNA binding domain WU08_RS13905 PF17674 HHH domain WU08_RS13910 PF00579 tRNA synthetases class I (W and Y) WU08_RS13935 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS13945 PF03466 LysR substrate binding domain WU08_RS13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS13955 PF03969 AFG1-like ATPase WU08_RS13960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU08_RS13960 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS13965 PF02817 e3 binding domain WU08_RS13965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU08_RS13965 PF00364 Biotin-requiring enzyme WU08_RS13970 PF02779 Transketolase, pyrimidine binding domain WU08_RS13970 PF00676 Dehydrogenase E1 component WU08_RS13970 PF16870 2-oxoglutarate dehydrogenase C-terminal WU08_RS13970 PF16078 2-oxoglutarate dehydrogenase N-terminus WU08_RS13980 PF01037 Lrp/AsnC ligand binding domain WU08_RS13985 PF17831 Pyruvate dehydrogenase E1 component middle domain WU08_RS13985 PF00456 Transketolase, thiamine diphosphate binding domain WU08_RS13990 PF00390 Malic enzyme, N-terminal domain WU08_RS13990 PF01515 Phosphate acetyl/butaryl transferase WU08_RS13990 PF03949 Malic enzyme, NAD binding domain WU08_RS13995 PF16970 Type-1 fimbrial protein, A WU08_RS14005 PF01272 Transcription elongation factor, GreA/GreB, C-term WU08_RS14005 PF03449 Transcription elongation factor, N-terminal WU08_RS14010 PF02811 PHP domain WU08_RS14020 PF00753 Metallo-beta-lactamase superfamily WU08_RS14020 PF03772 Competence protein WU08_RS14020 PF13567 Domain of unknown function (DUF4131) WU08_RS14050 PF01026 TatD related DNase WU08_RS14055 PF00005 ABC transporter WU08_RS14060 PF12704 MacB-like periplasmic core domain WU08_RS14060 PF02687 FtsX-like permease family WU08_RS14070 PF17768 RecJ OB domain WU08_RS14070 PF01368 DHH family WU08_RS14070 PF02272 DHHA1 domain WU08_RS14080 PF00106 short chain dehydrogenase WU08_RS14085 PF01336 OB-fold nucleic acid binding domain WU08_RS14085 PF00152 tRNA synthetases class II (D, K and N) WU08_RS14095 PF17932 Tetracyclin repressor-like, C-terminal domain WU08_RS14095 PF00440 Bacterial regulatory proteins, tetR family WU08_RS14100 PF00501 AMP-binding enzyme WU08_RS14105 PF00005 ABC transporter WU08_RS14115 PF02653 Branched-chain amino acid transport system / permease component WU08_RS14115 PF11862 Domain of unknown function (DUF3382) WU08_RS14125 PF00005 ABC transporter WU08_RS14125 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS14135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS14135 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS14135 PF07689 KaiB domain WU08_RS14140 PF00072 Response regulator receiver domain WU08_RS14140 PF00486 Transcriptional regulatory protein, C terminal WU08_RS14145 PF02696 Uncharacterized ACR, YdiU/UPF0061 family WU08_RS14155 PF03631 Virulence factor BrkB WU08_RS14170 PF01207 Dihydrouridine synthase (Dus) WU08_RS14175 PF01636 Phosphotransferase enzyme family WU08_RS14200 PF01985 CRS1 / YhbY (CRM) domain WU08_RS14205 PF01728 FtsJ-like methyltransferase WU08_RS14210 PF06480 FtsH Extracellular WU08_RS14210 PF17862 AAA+ lid domain WU08_RS14210 PF00004 ATPase family associated with various cellular activities (AAA) WU08_RS14210 PF01434 Peptidase family M41 WU08_RS14215 PF00809 Pterin binding enzyme WU08_RS14220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU08_RS14220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU08_RS14220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU08_RS14220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU08_RS14230 PF02541 Ppx/GppA phosphatase family WU08_RS14235 PF13089 Polyphosphate kinase N-terminal domain WU08_RS14235 PF17941 Polyphosphate kinase C-terminal domain 1 WU08_RS14235 PF13090 Polyphosphate kinase C-terminal domain 2 WU08_RS14235 PF02503 Polyphosphate kinase middle domain WU08_RS14240 PF12849 PBP superfamily domain WU08_RS14245 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS14255 PF00005 ABC transporter WU08_RS14270 PF01337 Barstar (barnase inhibitor) WU08_RS14280 PF00390 Malic enzyme, N-terminal domain WU08_RS14280 PF03949 Malic enzyme, NAD binding domain WU08_RS14280 PF01515 Phosphate acetyl/butaryl transferase WU08_RS14290 PF00155 Aminotransferase class I and II WU08_RS14295 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain WU08_RS14295 PF01464 Transglycosylase SLT domain WU08_RS14300 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WU08_RS14325 PF14824 Sirohaem biosynthesis protein central WU08_RS14325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WU08_RS14325 PF10414 Sirohaem synthase dimerisation region WU08_RS14330 PF03797 Autotransporter beta-domain WU08_RS14330 PF03212 Pertactin WU08_RS14345 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family WU08_RS14350 PF02547 Queuosine biosynthesis protein WU08_RS14355 PF01702 Queuine tRNA-ribosyltransferase WU08_RS14360 PF02699 Preprotein translocase subunit WU08_RS14365 PF13721 SecD export protein N-terminal TM region WU08_RS14365 PF07549 SecD/SecF GG Motif WU08_RS14365 PF02355 Protein export membrane protein WU08_RS14370 PF02355 Protein export membrane protein WU08_RS14370 PF07549 SecD/SecF GG Motif WU08_RS14385 PF04055 Radical SAM superfamily WU08_RS14385 PF00919 Uncharacterized protein family UPF0004 WU08_RS14385 PF01938 TRAM domain WU08_RS14390 PF02562 PhoH-like protein WU08_RS14395 PF02130 Uncharacterized protein family UPF0054 WU08_RS14400 PF00571 CBS domain WU08_RS14400 PF03471 Transporter associated domain WU08_RS14405 PF00795 Carbon-nitrogen hydrolase WU08_RS14410 PF00248 Aldo/keto reductase family WU08_RS14435 PF04344 Chemotaxis phosphatase, CheZ WU08_RS14440 PF00072 Response regulator receiver domain WU08_RS14445 PF00072 Response regulator receiver domain WU08_RS14445 PF01339 CheB methylesterase WU08_RS14455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU08_RS14455 PF00672 HAMP domain WU08_RS14455 PF02203 Tar ligand binding domain homologue WU08_RS14460 PF01584 CheW-like domain WU08_RS14465 PF01584 CheW-like domain WU08_RS14465 PF09078 CheY binding WU08_RS14465 PF01627 Hpt domain WU08_RS14465 PF02895 Signal transducing histidine kinase, homodimeric domain WU08_RS14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS14470 PF00072 Response regulator receiver domain WU08_RS14475 PF00691 OmpA family WU08_RS14475 PF13677 Membrane MotB of proton-channel complex MotA/MotB WU08_RS14480 PF01618 MotA/TolQ/ExbB proton channel family WU08_RS14485 PF05280 Flagellar transcriptional activator (FlhC) WU08_RS14490 PF05247 Flagellar transcriptional activator (FlhD) WU08_RS14495 PF04545 Sigma-70, region 4 WU08_RS14495 PF04542 Sigma-70 region 2 WU08_RS14495 PF04539 Sigma-70 region 3 WU08_RS14505 PF01176 Translation initiation factor 1A / IF-1 WU08_RS14515 PF01476 LysM domain WU08_RS14515 PF08525 Opacity-associated protein A N-terminal motif WU08_RS14515 PF01551 Peptidase family M23 WU08_RS14525 PF00994 Probable molybdopterin binding domain WU08_RS14535 PF03591 AzlC protein WU08_RS14545 PF00226 DnaJ domain WU08_RS14545 PF01556 DnaJ C terminal domain WU08_RS14570 PF14834 Glutathione S-transferase, C-terminal domain WU08_RS14570 PF02798 Glutathione S-transferase, N-terminal domain WU08_RS14575 PF11339 Protein of unknown function (DUF3141) WU08_RS14580 PF01515 Phosphate acetyl/butaryl transferase WU08_RS14585 PF00871 Acetokinase family WU08_RS14595 PF00162 Phosphoglycerate kinase WU08_RS14600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WU08_RS14600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WU08_RS14605 PF02779 Transketolase, pyrimidine binding domain WU08_RS14605 PF02780 Transketolase, C-terminal domain WU08_RS14605 PF00456 Transketolase, thiamine diphosphate binding domain WU08_RS14610 PF04452 RNA methyltransferase WU08_RS14620 PF00669 Bacterial flagellin N-terminal helical region WU08_RS14620 PF00700 Bacterial flagellin C-terminal helical region WU08_RS14625 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS14625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU08_RS14630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU08_RS14630 PF00364 Biotin-requiring enzyme WU08_RS14630 PF02817 e3 binding domain WU08_RS14635 PF17831 Pyruvate dehydrogenase E1 component middle domain WU08_RS14635 PF00456 Transketolase, thiamine diphosphate binding domain WU08_RS14640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS14640 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS14640 PF00989 PAS fold WU08_RS14645 PF00072 Response regulator receiver domain WU08_RS14645 PF00196 Bacterial regulatory proteins, luxR family WU08_RS14650 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WU08_RS14650 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WU08_RS14655 PF01432 Peptidase family M3 WU08_RS14660 PF02630 SCO1/SenC WU08_RS14670 PF02321 Outer membrane efflux protein WU08_RS14675 PF00873 AcrB/AcrD/AcrF family WU08_RS14680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU08_RS14680 PF00529 HlyD membrane-fusion protein of T1SS WU08_RS14685 PF03466 LysR substrate binding domain WU08_RS14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS14690 PF00849 RNA pseudouridylate synthase WU08_RS14690 PF01479 S4 domain WU08_RS14695 PF04345 Chorismate lyase WU08_RS14700 PF07690 Major Facilitator Superfamily WU08_RS14710 PF00248 Aldo/keto reductase family WU08_RS14720 PF00293 NUDIX domain WU08_RS14725 PF01245 Ribosomal protein L19 WU08_RS14740 PF04055 Radical SAM superfamily WU08_RS14750 PF01507 Phosphoadenosine phosphosulfate reductase family WU08_RS14755 PF00005 ABC transporter WU08_RS14755 PF17850 CysA C-terminal regulatory domain WU08_RS14755 PF12857 TOBE-like domain WU08_RS14760 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS14765 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS14780 PF00578 AhpC/TSA family WU08_RS14780 PF10417 C-terminal domain of 1-Cys peroxiredoxin WU08_RS14785 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS14785 PF12806 Acetyl-CoA dehydrogenase C-terminal like WU08_RS14785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS14785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS14790 PF00766 Electron transfer flavoprotein FAD-binding domain WU08_RS14790 PF01012 Electron transfer flavoprotein domain WU08_RS14795 PF01012 Electron transfer flavoprotein domain WU08_RS14800 PF00850 Histone deacetylase domain WU08_RS14805 PF13406 Transglycosylase SLT domain WU08_RS14810 PF00291 Pyridoxal-phosphate dependent enzyme WU08_RS14820 PF10531 SLBB domain WU08_RS14825 PF01370 NAD dependent epimerase/dehydratase family WU08_RS14830 PF00294 pfkB family carbohydrate kinase WU08_RS14835 PF18073 Rubredoxin metal binding domain WU08_RS14845 PF00216 Bacterial DNA-binding protein WU08_RS14850 PF00575 S1 RNA binding domain WU08_RS14855 PF02224 Cytidylate kinase WU08_RS14860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WU08_RS14865 PF02153 Prephenate dehydrogenase WU08_RS14870 PF01842 ACT domain WU08_RS14870 PF01817 Chorismate mutase type II WU08_RS14870 PF00800 Prephenate dehydratase WU08_RS14875 PF00266 Aminotransferase class-V WU08_RS14880 PF03989 DNA gyrase C-terminal domain, beta-propeller WU08_RS14880 PF00521 DNA gyrase/topoisomerase IV, subunit A WU08_RS14885 PF00691 OmpA family WU08_RS14895 PF13419 Haloacid dehalogenase-like hydrolase WU08_RS14900 PF07690 Major Facilitator Superfamily WU08_RS14925 PF03466 LysR substrate binding domain WU08_RS14925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS14930 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS14940 PF11798 IMS family HHH motif WU08_RS14940 PF00817 impB/mucB/samB family WU08_RS14940 PF11799 impB/mucB/samB family C-terminal domain WU08_RS14955 PF00326 Prolyl oligopeptidase family WU08_RS14960 PF17092 Penicillin-binding protein OB-like domain WU08_RS14960 PF00912 Transglycosylase WU08_RS14960 PF00905 Penicillin binding protein transpeptidase domain WU08_RS14965 PF00149 Calcineurin-like phosphoesterase WU08_RS14980 PF00248 Aldo/keto reductase family WU08_RS14985 PF00248 Aldo/keto reductase family WU08_RS14990 PF00005 ABC transporter WU08_RS14990 PF00664 ABC transporter transmembrane region WU08_RS15035 PF01039 Carboxyl transferase domain WU08_RS15040 PF00289 Biotin carboxylase, N-terminal domain WU08_RS15040 PF02785 Biotin carboxylase C-terminal domain WU08_RS15040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU08_RS15045 PF07702 UTRA domain WU08_RS15045 PF00392 Bacterial regulatory proteins, gntR family WU08_RS15065 PF02436 Conserved carboxylase domain WU08_RS15065 PF00682 HMGL-like WU08_RS15065 PF00364 Biotin-requiring enzyme WU08_RS15070 PF00364 Biotin-requiring enzyme WU08_RS15080 PF01966 HD domain WU08_RS15100 PF07238 PilZ domain WU08_RS15100 PF07317 Flagellar regulator YcgR WU08_RS15120 PF05724 Thiopurine S-methyltransferase (TPMT) WU08_RS15125 PF00005 ABC transporter WU08_RS15125 PF00664 ABC transporter transmembrane region WU08_RS15140 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS15140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS15140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS15145 PF10369 Small subunit of acetolactate synthase WU08_RS15150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain WU08_RS15150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain WU08_RS15155 PF01066 CDP-alcohol phosphatidyltransferase WU08_RS15170 PF00312 Ribosomal protein S15 WU08_RS15175 PF03725 3' exoribonuclease family, domain 2 WU08_RS15175 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WU08_RS15175 PF01138 3' exoribonuclease family, domain 1 WU08_RS15175 PF00013 KH domain WU08_RS15175 PF00575 S1 RNA binding domain WU08_RS15190 PF13291 ACT domain WU08_RS15190 PF00291 Pyridoxal-phosphate dependent enzyme WU08_RS15205 PF08990 Erythronolide synthase docking WU08_RS15205 PF16197 Ketoacyl-synthetase C-terminal extension WU08_RS15205 PF00550 Phosphopantetheine attachment site WU08_RS15205 PF02801 Beta-ketoacyl synthase, C-terminal domain WU08_RS15205 PF08659 KR domain WU08_RS15205 PF08240 Alcohol dehydrogenase GroES-like domain WU08_RS15205 PF14765 Polyketide synthase dehydratase WU08_RS15205 PF00698 Acyl transferase domain WU08_RS15205 PF00109 Beta-ketoacyl synthase, N-terminal domain WU08_RS15210 PF00121 Triosephosphate isomerase WU08_RS15215 PF03840 Preprotein translocase SecG subunit WU08_RS15225 PF02028 BCCT, betaine/carnitine/choline family transporter WU08_RS15235 PF05034 Methylaspartate ammonia-lyase N-terminus WU08_RS15235 PF07476 Methylaspartate ammonia-lyase C-terminus WU08_RS15240 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS15255 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS15270 PF03466 LysR substrate binding domain WU08_RS15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS15275 PF01053 Cys/Met metabolism PLP-dependent enzyme WU08_RS15280 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WU08_RS15295 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS15300 PF01266 FAD dependent oxidoreductase WU08_RS15310 PF01968 Hydantoinase/oxoprolinase WU08_RS15310 PF05378 Hydantoinase/oxoprolinase N-terminal region WU08_RS15320 PF00127 Copper binding proteins, plastocyanin/azurin family WU08_RS15330 PF02321 Outer membrane efflux protein WU08_RS15335 PF00873 AcrB/AcrD/AcrF family WU08_RS15340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU08_RS15345 PF01638 HxlR-like helix-turn-helix WU08_RS15355 PF02028 BCCT, betaine/carnitine/choline family transporter WU08_RS15360 PF03466 LysR substrate binding domain WU08_RS15360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS15365 PF00781 Diacylglycerol kinase catalytic domain WU08_RS15375 PF01569 PAP2 superfamily WU08_RS15405 PF13609 Gram-negative porin WU08_RS15410 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WU08_RS15415 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WU08_RS15420 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WU08_RS15425 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WU08_RS15435 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WU08_RS15435 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WU08_RS15435 PF10531 SLBB domain WU08_RS15440 PF00384 Molybdopterin oxidoreductase WU08_RS15440 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WU08_RS15440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WU08_RS15445 PF00146 NADH dehydrogenase WU08_RS15450 PF12838 4Fe-4S dicluster domain WU08_RS15455 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WU08_RS15460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WU08_RS15465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WU08_RS15465 PF00361 Proton-conducting membrane transporter WU08_RS15470 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus WU08_RS15470 PF00361 Proton-conducting membrane transporter WU08_RS15475 PF00361 Proton-conducting membrane transporter WU08_RS15485 PF07715 TonB-dependent Receptor Plug Domain WU08_RS15485 PF00593 TonB dependent receptor WU08_RS15490 PF07715 TonB-dependent Receptor Plug Domain WU08_RS15490 PF00593 TonB dependent receptor WU08_RS15505 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS15505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS15505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS15510 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS15515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS15515 PF03466 LysR substrate binding domain WU08_RS15525 PF02559 CarD-like/TRCF domain WU08_RS15525 PF00270 DEAD/DEAH box helicase WU08_RS15525 PF03461 TRCF domain WU08_RS15525 PF17757 UvrB interaction domain WU08_RS15525 PF00271 Helicase conserved C-terminal domain WU08_RS15530 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WU08_RS15535 PF02542 YgbB family WU08_RS15545 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain WU08_RS15550 PF01433 Peptidase family M1 domain WU08_RS15550 PF17432 Domain of unknown function (DUF3458_C) ARM repeats WU08_RS15550 PF11940 Domain of unknown function (DUF3458) Ig-like fold WU08_RS15570 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS15570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS15570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS15580 PF09084 NMT1/THI5 like WU08_RS15585 PF00005 ABC transporter WU08_RS15590 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS15600 PF13193 AMP-binding enzyme C-terminal domain WU08_RS15600 PF00501 AMP-binding enzyme WU08_RS15605 PF08240 Alcohol dehydrogenase GroES-like domain WU08_RS15605 PF00107 Zinc-binding dehydrogenase WU08_RS15610 PF07729 FCD domain WU08_RS15610 PF00392 Bacterial regulatory proteins, gntR family WU08_RS15620 PF00392 Bacterial regulatory proteins, gntR family WU08_RS15620 PF07729 FCD domain WU08_RS15625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS15625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS15625 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS15645 PF01063 Amino-transferase class IV WU08_RS15650 PF00005 ABC transporter WU08_RS15655 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS15665 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS15670 PF03466 LysR substrate binding domain WU08_RS15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS15675 PF02321 Outer membrane efflux protein WU08_RS15680 PF13533 Biotin-lipoyl like WU08_RS15685 PF00005 ABC transporter WU08_RS15685 PF03412 Peptidase C39 family WU08_RS15685 PF00664 ABC transporter transmembrane region WU08_RS15690 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) WU08_RS15690 PF03497 Anthrax toxin LF subunit WU08_RS15690 PF02382 N-terminal domain in RTX protein WU08_RS15700 PF02794 RTX toxin acyltransferase family WU08_RS15705 PF00171 Aldehyde dehydrogenase family WU08_RS15710 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS15715 PF01266 FAD dependent oxidoreductase WU08_RS15720 PF02538 Hydantoinase B/oxoprolinase WU08_RS15725 PF05378 Hydantoinase/oxoprolinase N-terminal region WU08_RS15725 PF01968 Hydantoinase/oxoprolinase WU08_RS15730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS15730 PF03466 LysR substrate binding domain WU08_RS15740 PF00348 Polyprenyl synthetase WU08_RS15750 PF00829 Ribosomal prokaryotic L21 protein WU08_RS15755 PF01016 Ribosomal L27 protein WU08_RS15760 PF01018 GTP1/OBG WU08_RS15760 PF01926 50S ribosome-binding GTPase WU08_RS15765 PF01472 PUA domain WU08_RS15765 PF00696 Amino acid kinase family WU08_RS15810 PF16220 Domain of unknown function (DUF4880) WU08_RS15810 PF04773 FecR protein WU08_RS15815 PF07715 TonB-dependent Receptor Plug Domain WU08_RS15815 PF00593 TonB dependent receptor WU08_RS15820 PF04264 YceI-like domain WU08_RS15830 PF16653 Saccharopine dehydrogenase C-terminal domain WU08_RS15830 PF03435 Saccharopine dehydrogenase NADP binding domain WU08_RS15835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WU08_RS15855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS15860 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS15865 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS15870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS15870 PF00005 ABC transporter WU08_RS15875 PF01425 Amidase WU08_RS15880 PF00202 Aminotransferase class-III WU08_RS15900 PF00691 OmpA family WU08_RS15900 PF04972 BON domain WU08_RS15905 PF01329 Pterin 4 alpha carbinolamine dehydratase WU08_RS15915 PF00483 Nucleotidyl transferase WU08_RS15920 PF01636 Phosphotransferase enzyme family WU08_RS15925 PF04453 LPS transport system D WU08_RS15930 PF09312 SurA N-terminal domain WU08_RS15930 PF00639 PPIC-type PPIASE domain WU08_RS15935 PF00398 Ribosomal RNA adenine dimethylase WU08_RS15940 PF02595 Glycerate kinase family WU08_RS15945 PF02887 Pyruvate kinase, alpha/beta domain WU08_RS15945 PF00224 Pyruvate kinase, barrel domain WU08_RS15950 PF07670 Nucleoside recognition WU08_RS15955 PF09317 Domain of unknown function (DUF1974) WU08_RS15955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS15955 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS15955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS15975 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS15980 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS15985 PF00005 ABC transporter WU08_RS15990 PF01032 FecCD transport family WU08_RS16000 PF00691 OmpA family WU08_RS16005 PF04052 TolB amino-terminal domain WU08_RS16005 PF07676 WD40-like Beta Propeller Repeat WU08_RS16015 PF02472 Biopolymer transport protein ExbD/TolR WU08_RS16020 PF01618 MotA/TolQ/ExbB proton channel family WU08_RS16025 PF03061 Thioesterase superfamily WU08_RS16030 PF04073 Aminoacyl-tRNA editing domain WU08_RS16030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU08_RS16030 PF03129 Anticodon binding domain WU08_RS16035 PF00293 NUDIX domain WU08_RS16040 PF00486 Transcriptional regulatory protein, C terminal WU08_RS16040 PF00072 Response regulator receiver domain WU08_RS16050 PF02586 SOS response associated peptidase (SRAP) WU08_RS16120 PF06791 Prophage tail length tape measure protein WU08_RS16265 PF03180 NLPA lipoprotein WU08_RS16275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WU08_RS16275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WU08_RS16280 PF00005 ABC transporter WU08_RS16285 PF00005 ABC transporter WU08_RS16285 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS16290 PF02653 Branched-chain amino acid transport system / permease component WU08_RS16295 PF02653 Branched-chain amino acid transport system / permease component WU08_RS16300 PF13458 Periplasmic binding protein WU08_RS16305 PF01425 Amidase WU08_RS16310 PF00484 Carbonic anhydrase WU08_RS16325 PF16124 RecQ zinc-binding WU08_RS16325 PF00570 HRDC domain WU08_RS16325 PF00271 Helicase conserved C-terminal domain WU08_RS16325 PF00270 DEAD/DEAH box helicase WU08_RS16325 PF09382 RQC domain WU08_RS16330 PF17864 RuvB AAA lid domain WU08_RS16330 PF05496 Holliday junction DNA helicase RuvB P-loop domain WU08_RS16330 PF05491 RuvB C-terminal winged helix domain WU08_RS16335 PF00291 Pyridoxal-phosphate dependent enzyme WU08_RS16340 PF01370 NAD dependent epimerase/dehydratase family WU08_RS16345 PF07499 RuvA, C-terminal domain WU08_RS16345 PF01330 RuvA N terminal domain WU08_RS16350 PF02075 Crossover junction endodeoxyribonuclease RuvC WU08_RS16355 PF02142 MGS-like domain WU08_RS16355 PF01808 AICARFT/IMPCHase bienzyme WU08_RS16360 PF02954 Bacterial regulatory protein, Fis family WU08_RS16365 PF01207 Dihydrouridine synthase (Dus) WU08_RS16370 PF01494 FAD binding domain WU08_RS16380 PF05195 Aminopeptidase P, N-terminal domain WU08_RS16380 PF00557 Metallopeptidase family M24 WU08_RS16405 PF13609 Gram-negative porin WU08_RS16415 PF00483 Nucleotidyl transferase WU08_RS16420 PF13181 Tetratricopeptide repeat WU08_RS16420 PF01435 Peptidase family M48 WU08_RS16425 PF00561 alpha/beta hydrolase fold WU08_RS16440 PF01063 Amino-transferase class IV WU08_RS16455 PF00270 DEAD/DEAH box helicase WU08_RS16455 PF00271 Helicase conserved C-terminal domain WU08_RS16475 PF02464 Competence-damaged protein WU08_RS16475 PF00994 Probable molybdopterin binding domain WU08_RS16475 PF18146 Damage-inducible protein CinA KH domain WU08_RS16480 PF01614 Bacterial transcriptional regulator WU08_RS16480 PF09339 IclR helix-turn-helix domain WU08_RS16485 PF05785 Rho-activating domain of cytotoxic necrotizing factor WU08_RS16485 PF18807 Tripartite Tc toxins repeat WU08_RS16490 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS16500 PF01180 Dihydroorotate dehydrogenase WU08_RS16505 PF04377 Arginine-tRNA-protein transferase, C terminus WU08_RS16505 PF04376 Arginine-tRNA-protein transferase, N terminus WU08_RS16510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase WU08_RS16520 PF03466 LysR substrate binding domain WU08_RS16520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS16560 PF00392 Bacterial regulatory proteins, gntR family WU08_RS16560 PF07729 FCD domain WU08_RS16565 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS16565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS16565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS16570 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS16575 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WU08_RS16580 PF00390 Malic enzyme, N-terminal domain WU08_RS16580 PF03949 Malic enzyme, NAD binding domain WU08_RS16580 PF01515 Phosphate acetyl/butaryl transferase WU08_RS16590 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS16595 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS16600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS16600 PF00005 ABC transporter WU08_RS16615 PF03466 LysR substrate binding domain WU08_RS16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS16630 PF01022 Bacterial regulatory protein, arsR family WU08_RS16645 PF03594 Benzoate membrane transport protein WU08_RS16650 PF00037 4Fe-4S binding domain WU08_RS16655 PF01467 Cytidylyltransferase-like WU08_RS16665 PF02881 SRP54-type protein, helical bundle domain WU08_RS16665 PF00448 SRP54-type protein, GTPase domain WU08_RS16675 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS16680 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS16685 PF00005 ABC transporter WU08_RS16695 PF00005 ABC transporter WU08_RS16715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WU08_RS16715 PF00925 GTP cyclohydrolase II WU08_RS16720 PF00885 6,7-dimethyl-8-ribityllumazine synthase WU08_RS16725 PF01029 NusB family WU08_RS16730 PF00586 AIR synthase related protein, N-terminal domain WU08_RS16730 PF02769 AIR synthase related protein, C-terminal domain WU08_RS16735 PF04608 Phosphatidylglycerophosphatase A WU08_RS16740 PF02464 Competence-damaged protein WU08_RS16740 PF18146 Damage-inducible protein CinA KH domain WU08_RS16740 PF00994 Probable molybdopterin binding domain WU08_RS16745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WU08_RS16750 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS16755 PF01219 Prokaryotic diacylglycerol kinase WU08_RS16760 PF03631 Virulence factor BrkB WU08_RS16765 PF03212 Pertactin WU08_RS16765 PF03797 Autotransporter beta-domain WU08_RS16770 PF00118 TCP-1/cpn60 chaperonin family WU08_RS16775 PF00166 Chaperonin 10 Kd subunit WU08_RS16795 PF00890 FAD binding domain WU08_RS16805 PF03466 LysR substrate binding domain WU08_RS16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS16810 PF00890 FAD binding domain WU08_RS16830 PF00990 Diguanylate cyclase, GGDEF domain WU08_RS16835 PF00072 Response regulator receiver domain WU08_RS16865 PF03781 Sulfatase-modifying factor enzyme 1 WU08_RS16865 PF12867 DinB superfamily WU08_RS16870 PF10017 Histidine-specific methyltransferase, SAM-dependent WU08_RS16880 PF13091 PLD-like domain WU08_RS16880 PF13396 Phospholipase_D-nuclease N-terminal WU08_RS16890 PF01645 Conserved region in glutamate synthase WU08_RS16895 PF04143 Sulphur transport WU08_RS16900 PF03547 Membrane transport protein WU08_RS16905 PF13673 Acetyltransferase (GNAT) domain WU08_RS16925 PF08206 Ribonuclease B OB domain WU08_RS16925 PF08461 Ribonuclease R winged-helix domain WU08_RS16925 PF17876 Cold shock domain WU08_RS16925 PF00575 S1 RNA binding domain WU08_RS16925 PF00773 RNB domain WU08_RS16930 PF08032 RNA 2'-O ribose methyltransferase substrate binding WU08_RS16930 PF00588 SpoU rRNA Methylase family WU08_RS16935 PF01053 Cys/Met metabolism PLP-dependent enzyme WU08_RS16940 PF13640 2OG-Fe(II) oxygenase superfamily WU08_RS16940 PF18331 PKHD-type hydroxylase C-terminal domain WU08_RS16945 PF00216 Bacterial DNA-binding protein WU08_RS16960 PF01618 MotA/TolQ/ExbB proton channel family WU08_RS16965 PF02472 Biopolymer transport protein ExbD/TolR WU08_RS16970 PF00486 Transcriptional regulatory protein, C terminal WU08_RS16970 PF00072 Response regulator receiver domain WU08_RS16975 PF08521 Two-component sensor kinase N-terminal WU08_RS16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS16975 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS16980 PF02705 K+ potassium transporter WU08_RS16985 PF00764 Arginosuccinate synthase WU08_RS16990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU08_RS16990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU08_RS16995 PF00202 Aminotransferase class-III WU08_RS17005 PF03466 LysR substrate binding domain WU08_RS17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS17015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU08_RS17015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU08_RS17020 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17035 PF07729 FCD domain WU08_RS17035 PF00392 Bacterial regulatory proteins, gntR family WU08_RS17045 PF07690 Major Facilitator Superfamily WU08_RS17055 PF02627 Carboxymuconolactone decarboxylase family WU08_RS17060 PF00578 AhpC/TSA family WU08_RS17065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS17065 PF00672 HAMP domain WU08_RS17065 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS17075 PF00486 Transcriptional regulatory protein, C terminal WU08_RS17075 PF00072 Response regulator receiver domain WU08_RS17080 PF00814 Glycoprotease family WU08_RS17085 PF03167 Uracil DNA glycosylase superfamily WU08_RS17090 PF07690 Major Facilitator Superfamily WU08_RS17095 PF02463 RecF/RecN/SMC N terminal domain WU08_RS17095 PF06470 SMC proteins Flexible Hinge Domain WU08_RS17105 PF00533 BRCA1 C Terminus (BRCT) domain WU08_RS17105 PF01653 NAD-dependent DNA ligase adenylation domain WU08_RS17105 PF03120 NAD-dependent DNA ligase OB-fold domain WU08_RS17105 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WU08_RS17105 PF12826 Helix-hairpin-helix motif WU08_RS17120 PF04279 Intracellular septation protein A WU08_RS17125 PF01641 SelR domain WU08_RS17130 PF00005 ABC transporter WU08_RS17135 PF02361 Cobalt transport protein WU08_RS17140 PF02632 BioY family WU08_RS17155 PF00005 ABC transporter WU08_RS17155 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS17160 PF01063 Amino-transferase class IV WU08_RS17175 PF02653 Branched-chain amino acid transport system / permease component WU08_RS17185 PF00005 ABC transporter WU08_RS17190 PF00005 ABC transporter WU08_RS17190 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS17195 PF00730 HhH-GPD superfamily base excision DNA repair protein WU08_RS17195 PF10576 Iron-sulfur binding domain of endonuclease III WU08_RS17195 PF00633 Helix-hairpin-helix motif WU08_RS17200 PF04060 Putative Fe-S cluster WU08_RS17210 PF00970 Oxidoreductase FAD-binding domain WU08_RS17210 PF00175 Oxidoreductase NAD-binding domain WU08_RS17215 PF00037 4Fe-4S binding domain WU08_RS17215 PF11953 Domain of unknown function (DUF3470) WU08_RS17220 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain WU08_RS17220 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family WU08_RS17225 PF01042 Endoribonuclease L-PSP WU08_RS17235 PF06167 Glucose-regulated metallo-peptidase M90 WU08_RS17240 PF04607 Region found in RelA / SpoT proteins WU08_RS17240 PF13291 ACT domain WU08_RS17240 PF02824 TGS domain WU08_RS17245 PF07687 Peptidase dimerisation domain WU08_RS17245 PF01546 Peptidase family M20/M25/M40 WU08_RS17250 PF00291 Pyridoxal-phosphate dependent enzyme WU08_RS17255 PF00290 Tryptophan synthase alpha chain WU08_RS17260 PF01039 Carboxyl transferase domain WU08_RS17260 PF17848 Acetyl-coA carboxylase zinc finger domain WU08_RS17265 PF09411 Lipid A 3-O-deacylase (PagL) WU08_RS17280 PF00575 S1 RNA binding domain WU08_RS17280 PF10150 Ribonuclease E/G family WU08_RS17280 PF12111 Polyribonucleotide phosphorylase C terminal WU08_RS17285 PF00849 RNA pseudouridylate synthase WU08_RS17285 PF01479 S4 domain WU08_RS17290 PF13419 Haloacid dehalogenase-like hydrolase WU08_RS17295 PF00174 Oxidoreductase molybdopterin binding domain WU08_RS17300 PF01794 Ferric reductase like transmembrane component WU08_RS17310 PF02515 CoA-transferase family III WU08_RS17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS17315 PF03466 LysR substrate binding domain WU08_RS17325 PF02515 CoA-transferase family III WU08_RS17330 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17340 PF03466 LysR substrate binding domain WU08_RS17340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS17345 PF01042 Endoribonuclease L-PSP WU08_RS17350 PF00175 Oxidoreductase NAD-binding domain WU08_RS17350 PF00970 Oxidoreductase FAD-binding domain WU08_RS17350 PF00042 Globin WU08_RS17355 PF02667 Short chain fatty acid transporter WU08_RS17360 PF00171 Aldehyde dehydrogenase family WU08_RS17365 PF00392 Bacterial regulatory proteins, gntR family WU08_RS17365 PF07729 FCD domain WU08_RS17375 PF00313 'Cold-shock' DNA-binding domain WU08_RS17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS17380 PF03466 LysR substrate binding domain WU08_RS17400 PF02803 Thiolase, C-terminal domain WU08_RS17400 PF00108 Thiolase, N-terminal domain WU08_RS17410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS17410 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS17410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS17415 PF03466 LysR substrate binding domain WU08_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS17420 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17425 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS17430 PF02515 CoA-transferase family III WU08_RS17435 PF03471 Transporter associated domain WU08_RS17435 PF03741 Integral membrane protein TerC family WU08_RS17440 PF02308 MgtC family WU08_RS17445 PF00679 Elongation factor G C-terminus WU08_RS17445 PF00009 Elongation factor Tu GTP binding domain WU08_RS17445 PF03144 Elongation factor Tu domain 2 WU08_RS17445 PF14492 Elongation Factor G, domain II WU08_RS17445 PF03764 Elongation factor G, domain IV WU08_RS17450 PF00392 Bacterial regulatory proteins, gntR family WU08_RS17450 PF00155 Aminotransferase class I and II WU08_RS17460 PF00582 Universal stress protein family WU08_RS17465 PF03144 Elongation factor Tu domain 2 WU08_RS17465 PF00009 Elongation factor Tu GTP binding domain WU08_RS17465 PF03764 Elongation factor G, domain IV WU08_RS17465 PF14492 Elongation Factor G, domain II WU08_RS17465 PF00679 Elongation factor G C-terminus WU08_RS17475 PF00701 Dihydrodipicolinate synthetase family WU08_RS17480 PF03466 LysR substrate binding domain WU08_RS17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS17485 PF02515 CoA-transferase family III WU08_RS17490 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS17495 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS17495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS17500 PF01575 MaoC like domain WU08_RS17515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WU08_RS17515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WU08_RS17520 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS17525 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS17525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS17525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS17530 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17535 PF13607 Succinyl-CoA ligase like flavodoxin domain WU08_RS17535 PF13380 CoA binding domain WU08_RS17545 PF00676 Dehydrogenase E1 component WU08_RS17550 PF02780 Transketolase, C-terminal domain WU08_RS17550 PF02779 Transketolase, pyrimidine binding domain WU08_RS17555 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS17560 PF00364 Biotin-requiring enzyme WU08_RS17560 PF02817 e3 binding domain WU08_RS17560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU08_RS17565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS17565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS17565 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS17570 PF13193 AMP-binding enzyme C-terminal domain WU08_RS17570 PF00501 AMP-binding enzyme WU08_RS17580 PF13458 Periplasmic binding protein WU08_RS17585 PF02653 Branched-chain amino acid transport system / permease component WU08_RS17590 PF00005 ABC transporter WU08_RS17590 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU08_RS17595 PF00005 ABC transporter WU08_RS17600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU08_RS17600 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS17615 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17630 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17640 PF00899 ThiF family WU08_RS17645 PF13180 PDZ domain WU08_RS17645 PF03572 Peptidase family S41 WU08_RS17650 PF01551 Peptidase family M23 WU08_RS17655 PF00300 Histidine phosphatase superfamily (branch 1) WU08_RS17660 PF17773 UPF0176 acylphosphatase like domain WU08_RS17660 PF12368 Rhodanase C-terminal WU08_RS17660 PF00581 Rhodanese-like domain WU08_RS17665 PF00462 Glutaredoxin WU08_RS17670 PF02556 Preprotein translocase subunit SecB WU08_RS17675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WU08_RS17675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WU08_RS17680 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17685 PF00588 SpoU rRNA Methylase family WU08_RS17695 PF08241 Methyltransferase domain WU08_RS17700 PF04107 Glutamate-cysteine ligase family 2(GCS2) WU08_RS17705 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU08_RS17715 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS17720 PF00005 ABC transporter WU08_RS17730 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS17730 PF01799 [2Fe-2S] binding domain WU08_RS17735 PF03450 CO dehydrogenase flavoprotein C-terminal domain WU08_RS17735 PF00941 FAD binding domain in molybdopterin dehydrogenase WU08_RS17740 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU08_RS17740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU08_RS17745 PF03480 Bacterial extracellular solute-binding protein, family 7 WU08_RS17750 PF00355 Rieske [2Fe-2S] domain WU08_RS17755 PF14759 Reductase C-terminal WU08_RS17755 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS17760 PF00355 Rieske [2Fe-2S] domain WU08_RS17760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WU08_RS17770 PF00857 Isochorismatase family WU08_RS17780 PF00561 alpha/beta hydrolase fold WU08_RS17785 PF17645 Arylmalonate decarboxylase WU08_RS17795 PF12804 MobA-like NTP transferase domain WU08_RS17805 PF01047 MarR family WU08_RS17810 PF02386 Cation transport protein WU08_RS17815 PF02254 TrkA-N domain WU08_RS17815 PF02080 TrkA-C domain WU08_RS17820 PF00072 Response regulator receiver domain WU08_RS17820 PF00158 Sigma-54 interaction domain WU08_RS17820 PF02954 Bacterial regulatory protein, Fis family WU08_RS17825 PF00989 PAS fold WU08_RS17825 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS17825 PF00672 HAMP domain WU08_RS17835 PF01189 16S rRNA methyltransferase RsmB/F WU08_RS17835 PF01029 NusB family WU08_RS17845 PF01958 Domain of unknown function DUF108 WU08_RS17845 PF03447 Homoserine dehydrogenase, NAD binding domain WU08_RS17865 PF01810 LysE type translocator WU08_RS17870 PF03466 LysR substrate binding domain WU08_RS17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS17880 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17885 PF01168 Alanine racemase, N-terminal domain WU08_RS17890 PF00155 Aminotransferase class I and II WU08_RS17895 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS17905 PF00682 HMGL-like WU08_RS17910 PF17782 DprA winged helix domain WU08_RS17910 PF02481 DNA recombination-mediator protein A WU08_RS17915 PF01037 Lrp/AsnC ligand binding domain WU08_RS17920 PF00266 Aminotransferase class-V WU08_RS17925 PF01327 Polypeptide deformylase WU08_RS17940 PF00551 Formyl transferase WU08_RS17940 PF02911 Formyl transferase, C-terminal domain WU08_RS17950 PF13419 Haloacid dehalogenase-like hydrolase WU08_RS17960 PF03641 Possible lysine decarboxylase WU08_RS17970 PF00919 Uncharacterized protein family UPF0004 WU08_RS17970 PF04055 Radical SAM superfamily WU08_RS17970 PF18693 TRAM domain WU08_RS17975 PF01361 Tautomerase enzyme WU08_RS17980 PF01266 FAD dependent oxidoreductase WU08_RS17985 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS17990 PF00392 Bacterial regulatory proteins, gntR family WU08_RS17990 PF07729 FCD domain WU08_RS18005 PF00202 Aminotransferase class-III WU08_RS18010 PF00491 Arginase family WU08_RS18020 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS18025 PF02627 Carboxymuconolactone decarboxylase family WU08_RS18030 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS18035 PF01614 Bacterial transcriptional regulator WU08_RS18035 PF09339 IclR helix-turn-helix domain WU08_RS18040 PF13193 AMP-binding enzyme C-terminal domain WU08_RS18040 PF00501 AMP-binding enzyme WU08_RS18045 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS18055 PF12951 Passenger-associated-transport-repeat WU08_RS18055 PF12951 Passenger-associated-transport-repeat WU08_RS18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS18075 PF03466 LysR substrate binding domain WU08_RS18085 PF01168 Alanine racemase, N-terminal domain WU08_RS18085 PF14031 Putative serine dehydratase domain WU08_RS18090 PF07411 Domain of unknown function (DUF1508) WU08_RS18095 PF01145 SPFH domain / Band 7 family WU08_RS18105 PF01042 Endoribonuclease L-PSP WU08_RS18150 PF03837 RecT family WU08_RS18185 PF00589 Phage integrase family WU08_RS18190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS18190 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS18205 PF03466 LysR substrate binding domain WU08_RS18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS18210 PF02525 Flavodoxin-like fold WU08_RS18220 PF02096 60Kd inner membrane protein WU08_RS18220 PF14849 YidC periplasmic domain WU08_RS18225 PF01809 Putative membrane protein insertion efficiency factor WU08_RS18230 PF00825 Ribonuclease P WU08_RS18235 PF00468 Ribosomal protein L34 WU08_RS18240 PF00308 Bacterial dnaA protein WU08_RS18240 PF08299 Bacterial dnaA protein helix-turn-helix WU08_RS18240 PF11638 DnaA N-terminal domain WU08_RS18245 PF02768 DNA polymerase III beta subunit, C-terminal domain WU08_RS18245 PF00712 DNA polymerase III beta subunit, N-terminal domain WU08_RS18245 PF02767 DNA polymerase III beta subunit, central domain WU08_RS18250 PF01751 Toprim domain WU08_RS18250 PF18053 DNA gyrase B subunit insert domain WU08_RS18250 PF00204 DNA gyrase B WU08_RS18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS18250 PF00986 DNA gyrase B subunit, carboxyl terminus WU08_RS18255 PF09339 IclR helix-turn-helix domain WU08_RS18255 PF01614 Bacterial transcriptional regulator WU08_RS18260 PF01425 Amidase WU08_RS18265 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS18270 PF00708 Acylphosphatase WU08_RS18275 PF01070 FMN-dependent dehydrogenase WU08_RS18295 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS18295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS18295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS18300 PF00376 MerR family regulatory protein WU08_RS18300 PF09278 MerR, DNA binding WU08_RS18315 PF02770 Acyl-CoA dehydrogenase, middle domain WU08_RS18315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU08_RS18315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU08_RS18330 PF01039 Carboxyl transferase domain WU08_RS18335 PF00289 Biotin carboxylase, N-terminal domain WU08_RS18335 PF02785 Biotin carboxylase C-terminal domain WU08_RS18335 PF00364 Biotin-requiring enzyme WU08_RS18335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU08_RS18345 PF00202 Aminotransferase class-III WU08_RS18350 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS18355 PF01168 Alanine racemase, N-terminal domain WU08_RS18355 PF14031 Putative serine dehydratase domain WU08_RS18360 PF16868 NMT1-like family WU08_RS18370 PF07715 TonB-dependent Receptor Plug Domain WU08_RS18370 PF00593 TonB dependent receptor WU08_RS18375 PF04361 Protein of unknown function (DUF494) WU08_RS18390 PF01751 Toprim domain WU08_RS18390 PF01131 DNA topoisomerase WU08_RS18400 PF00005 ABC transporter WU08_RS18405 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS18415 PF00171 Aldehyde dehydrogenase family WU08_RS18425 PF00205 Thiamine pyrophosphate enzyme, central domain WU08_RS18425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU08_RS18425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU08_RS18430 PF01037 Lrp/AsnC ligand binding domain WU08_RS18435 PF01062 Bestrophin, RFP-TM, chloride channel WU08_RS18445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WU08_RS18460 PF02607 B12 binding domain WU08_RS18460 PF02574 Homocysteine S-methyltransferase WU08_RS18460 PF00809 Pterin binding enzyme WU08_RS18460 PF02965 Vitamin B12 dependent methionine synthase, activation domain WU08_RS18460 PF02310 B12 binding domain WU08_RS18465 PF00593 TonB dependent receptor WU08_RS18465 PF07715 TonB-dependent Receptor Plug Domain WU08_RS18470 PF01497 Periplasmic binding protein WU08_RS18475 PF05690 Thiazole biosynthesis protein ThiG WU08_RS18480 PF08543 Phosphomethylpyrimidine kinase WU08_RS18495 PF02321 Outer membrane efflux protein WU08_RS18500 PF01467 Cytidylyltransferase-like WU08_RS18510 PF01594 AI-2E family transporter WU08_RS18520 PF02254 TrkA-N domain WU08_RS18520 PF07885 Ion channel WU08_RS18530 PF00164 Ribosomal protein S12/S23 WU08_RS18535 PF00177 Ribosomal protein S7p/S5e WU08_RS18540 PF03144 Elongation factor Tu domain 2 WU08_RS18540 PF00009 Elongation factor Tu GTP binding domain WU08_RS18540 PF03764 Elongation factor G, domain IV WU08_RS18540 PF14492 Elongation Factor G, domain II WU08_RS18540 PF00679 Elongation factor G C-terminus WU08_RS18545 PF03143 Elongation factor Tu C-terminal domain WU08_RS18545 PF03144 Elongation factor Tu domain 2 WU08_RS18545 PF00009 Elongation factor Tu GTP binding domain WU08_RS18550 PF00338 Ribosomal protein S10p/S20e WU08_RS18555 PF00297 Ribosomal protein L3 WU08_RS18560 PF00573 Ribosomal protein L4/L1 family WU08_RS18565 PF00276 Ribosomal protein L23 WU08_RS18570 PF03947 Ribosomal Proteins L2, C-terminal domain WU08_RS18570 PF00181 Ribosomal Proteins L2, RNA binding domain WU08_RS18575 PF00203 Ribosomal protein S19 WU08_RS18580 PF00237 Ribosomal protein L22p/L17e WU08_RS18585 PF00189 Ribosomal protein S3, C-terminal domain WU08_RS18585 PF07650 KH domain WU08_RS18590 PF00252 Ribosomal protein L16p/L10e WU08_RS18595 PF00831 Ribosomal L29 protein WU08_RS18600 PF00366 Ribosomal protein S17 WU08_RS18610 PF00171 Aldehyde dehydrogenase family WU08_RS18620 PF00238 Ribosomal protein L14p/L23e WU08_RS18625 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WU08_RS18630 PF00673 ribosomal L5P family C-terminus WU08_RS18630 PF00281 Ribosomal protein L5 WU08_RS18635 PF00253 Ribosomal protein S14p/S29e WU08_RS18640 PF00410 Ribosomal protein S8 WU08_RS18645 PF00347 Ribosomal protein L6 WU08_RS18650 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WU08_RS18655 PF00333 Ribosomal protein S5, N-terminal domain WU08_RS18655 PF03719 Ribosomal protein S5, C-terminal domain WU08_RS18660 PF00327 Ribosomal protein L30p/L7e WU08_RS18665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WU08_RS18670 PF00344 SecY translocase WU08_RS18675 PF01176 Translation initiation factor 1A / IF-1 WU08_RS18680 PF00444 Ribosomal protein L36 WU08_RS18685 PF00416 Ribosomal protein S13/S18 WU08_RS18690 PF00411 Ribosomal protein S11 WU08_RS18695 PF01479 S4 domain WU08_RS18695 PF00163 Ribosomal protein S4/S9 N-terminal domain WU08_RS18700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WU08_RS18700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WU08_RS18700 PF01000 RNA polymerase Rpb3/RpoA insert domain WU08_RS18705 PF01196 Ribosomal protein L17 WU08_RS18710 PF01230 HIT domain WU08_RS18715 PF03091 CutA1 divalent ion tolerance protein WU08_RS18720 PF11412 Disulphide bond corrector protein DsbC WU08_RS18720 PF02683 Cytochrome C biogenesis protein transmembrane region WU08_RS18725 PF00892 EamA-like transporter family WU08_RS18730 PF00490 Delta-aminolevulinic acid dehydratase WU08_RS18735 PF01926 50S ribosome-binding GTPase WU08_RS18740 PF00034 Cytochrome c WU08_RS18745 PF05140 ResB-like family WU08_RS18750 PF01578 Cytochrome C assembly protein WU08_RS18755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WU08_RS18755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WU08_RS18760 PF13627 Prokaryotic lipoprotein-attachment site WU08_RS18765 PF01491 Frataxin-like domain WU08_RS18770 PF17092 Penicillin-binding protein OB-like domain WU08_RS18770 PF00912 Transglycosylase WU08_RS18770 PF00905 Penicillin binding protein transpeptidase domain WU08_RS18775 PF01202 Shikimate kinase WU08_RS18780 PF01761 3-dehydroquinate synthase WU08_RS18785 PF13286 Phosphohydrolase-associated domain WU08_RS18785 PF01966 HD domain WU08_RS18790 PF00043 Glutathione S-transferase, C-terminal domain WU08_RS18790 PF13417 Glutathione S-transferase, N-terminal domain WU08_RS18795 PF17760 UvrA interaction domain WU08_RS18795 PF17755 UvrA DNA-binding domain WU08_RS18800 PF07690 Major Facilitator Superfamily WU08_RS18805 PF00436 Single-strand binding protein family WU08_RS18810 PF07715 TonB-dependent Receptor Plug Domain WU08_RS18810 PF00593 TonB dependent receptor WU08_RS18820 PF03328 HpcH/HpaI aldolase/citrate lyase family WU08_RS18830 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS18840 PF03466 LysR substrate binding domain WU08_RS18840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS18845 PF01979 Amidohydrolase family WU08_RS18850 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS18855 PF00534 Glycosyl transferases group 1 WU08_RS18855 PF13439 Glycosyltransferase Family 4 WU08_RS18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS18865 PF03466 LysR substrate binding domain WU08_RS18875 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS18880 PF00005 ABC transporter WU08_RS18900 PF01274 Malate synthase WU08_RS18905 PF07729 FCD domain WU08_RS18905 PF00392 Bacterial regulatory proteins, gntR family WU08_RS18920 PF01040 UbiA prenyltransferase family WU08_RS18925 PF00155 Aminotransferase class I and II WU08_RS18930 PF13185 GAF domain WU08_RS18935 PF00701 Dihydrodipicolinate synthetase family WU08_RS18950 PF01476 LysM domain WU08_RS18950 PF04972 BON domain WU08_RS18955 PF02597 ThiS family WU08_RS18955 PF05690 Thiazole biosynthesis protein ThiG WU08_RS18960 PF00561 alpha/beta hydrolase fold WU08_RS18965 PF02390 Putative methyltransferase WU08_RS18980 PF00682 HMGL-like WU08_RS18985 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS19005 PF07702 UTRA domain WU08_RS19005 PF00392 Bacterial regulatory proteins, gntR family WU08_RS19010 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS19020 PF00392 Bacterial regulatory proteins, gntR family WU08_RS19020 PF07702 UTRA domain WU08_RS19025 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS19035 PF00005 ABC transporter WU08_RS19040 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS19045 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS19050 PF02801 Beta-ketoacyl synthase, C-terminal domain WU08_RS19050 PF08659 KR domain WU08_RS19050 PF00550 Phosphopantetheine attachment site WU08_RS19050 PF14765 Polyketide synthase dehydratase WU08_RS19050 PF00698 Acyl transferase domain WU08_RS19050 PF08240 Alcohol dehydrogenase GroES-like domain WU08_RS19050 PF16197 Ketoacyl-synthetase C-terminal extension WU08_RS19050 PF00109 Beta-ketoacyl synthase, N-terminal domain WU08_RS19050 PF08990 Erythronolide synthase docking WU08_RS19055 PF02515 CoA-transferase family III WU08_RS19060 PF00440 Bacterial regulatory proteins, tetR family WU08_RS19065 PF09297 NADH pyrophosphatase zinc ribbon domain WU08_RS19065 PF00293 NUDIX domain WU08_RS19070 PF00175 Oxidoreductase NAD-binding domain WU08_RS19070 PF00111 2Fe-2S iron-sulfur cluster binding domain WU08_RS19070 PF00970 Oxidoreductase FAD-binding domain WU08_RS19075 PF01425 Amidase WU08_RS19085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU08_RS19085 PF03466 LysR substrate binding domain WU08_RS19090 PF13458 Periplasmic binding protein WU08_RS19100 PF00005 ABC transporter WU08_RS19110 PF02653 Branched-chain amino acid transport system / permease component WU08_RS19120 PF00355 Rieske [2Fe-2S] domain WU08_RS19135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WU08_RS19135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WU08_RS19150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU08_RS19150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU08_RS19150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU08_RS19155 PF07690 Major Facilitator Superfamily WU08_RS19160 PF12804 MobA-like NTP transferase domain WU08_RS19160 PF00132 Bacterial transferase hexapeptide (six repeats) WU08_RS19160 PF14602 Hexapeptide repeat of succinyl-transferase WU08_RS19180 PF02630 SCO1/SenC WU08_RS19185 PF01040 UbiA prenyltransferase family WU08_RS19190 PF02628 Cytochrome oxidase assembly protein WU08_RS19210 PF00510 Cytochrome c oxidase subunit III WU08_RS19225 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU08_RS19230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WU08_RS19230 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WU08_RS19240 PF00999 Sodium/hydrogen exchanger family WU08_RS19245 PF00149 Calcineurin-like phosphoesterase WU08_RS19250 PF00140 Sigma-70 factor, region 1.2 WU08_RS19250 PF04545 Sigma-70, region 4 WU08_RS19250 PF04542 Sigma-70 region 2 WU08_RS19260 PF00756 Putative esterase WU08_RS19265 PF08240 Alcohol dehydrogenase GroES-like domain WU08_RS19265 PF00107 Zinc-binding dehydrogenase WU08_RS19275 PF00310 Glutamine amidotransferases class-II WU08_RS19275 PF01493 GXGXG motif WU08_RS19275 PF01645 Conserved region in glutamate synthase WU08_RS19275 PF04898 Glutamate synthase central domain WU08_RS19280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WU08_RS19280 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU08_RS19285 PF03922 OmpW family WU08_RS19290 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS19295 PF00005 ABC transporter WU08_RS19300 PF02405 Permease MlaE WU08_RS19305 PF02470 MlaD protein WU08_RS19310 PF04333 MlaA lipoprotein WU08_RS19320 PF00005 ABC transporter WU08_RS19325 PF01061 ABC-2 type transporter WU08_RS19335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WU08_RS19340 PF01634 ATP phosphoribosyltransferase WU08_RS19345 PF00815 Histidinol dehydrogenase WU08_RS19350 PF00155 Aminotransferase class I and II WU08_RS19355 PF00475 Imidazoleglycerol-phosphate dehydratase WU08_RS19360 PF00117 Glutamine amidotransferase class-I WU08_RS19365 PF00977 Histidine biosynthesis protein WU08_RS19370 PF00977 Histidine biosynthesis protein WU08_RS19375 PF01502 Phosphoribosyl-AMP cyclohydrolase WU08_RS19380 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase WU08_RS19385 PF01230 HIT domain WU08_RS19390 PF02416 mttA/Hcf106 family WU08_RS19395 PF02416 mttA/Hcf106 family WU08_RS19400 PF00902 Sec-independent protein translocase protein (TatC) WU08_RS19410 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS19415 PF02917 Pertussis toxin, subunit 1 WU08_RS19420 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain WU08_RS19420 PF03440 Aerolysin/Pertussis toxin (APT) domain WU08_RS19425 PF09275 Pertussis toxin S4 subunit WU08_RS19430 PF09276 Pertussis toxin S5 subunit WU08_RS19435 PF03440 Aerolysin/Pertussis toxin (APT) domain WU08_RS19435 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain WU08_RS19440 PF04956 TrbC/VIRB2 family WU08_RS19445 PF05101 Type IV secretory pathway, VirB3-like protein WU08_RS19450 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WU08_RS19455 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WU08_RS19465 PF04335 VirB8 protein WU08_RS19470 PF03524 Conjugal transfer protein WU08_RS19475 PF03743 Bacterial conjugation TrbI-like protein WU08_RS19480 PF00437 Type II/IV secretion system protein WU08_RS19490 PF00892 EamA-like transporter family WU08_RS19510 PF01926 50S ribosome-binding GTPase WU08_RS19510 PF10396 GTP-binding protein TrmE N-terminus WU08_RS19510 PF12631 MnmE helical domain WU08_RS19515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS19520 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS19525 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS19525 PF12911 N-terminal TM domain of oligopeptide transport permease C WU08_RS19530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS19530 PF00005 ABC transporter WU08_RS19540 PF01960 ArgJ family WU08_RS19550 PF00293 NUDIX domain WU08_RS19575 PF02321 Outer membrane efflux protein WU08_RS19580 PF00873 AcrB/AcrD/AcrF family WU08_RS19585 PF00873 AcrB/AcrD/AcrF family WU08_RS19590 PF13533 Biotin-lipoyl like WU08_RS19595 PF07072 Cell division protein WU08_RS19600 PF01121 Dephospho-CoA kinase WU08_RS19605 PF06750 Bacterial Peptidase A24 N-terminal domain WU08_RS19605 PF01478 Type IV leader peptidase family WU08_RS19620 PF02569 Pantoate-beta-alanine ligase WU08_RS19625 PF02616 Segregation and condensation protein ScpA WU08_RS19635 PF07690 Major Facilitator Superfamily WU08_RS19640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WU08_RS19640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WU08_RS19650 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS19655 PF00005 ABC transporter WU08_RS19660 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS19665 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS19670 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU08_RS19675 PF00005 ABC transporter WU08_RS19680 PF18075 FtsX extracellular domain WU08_RS19685 PF03975 CheD chemotactic sensory transduction WU08_RS19695 PF14815 NUDIX domain WU08_RS19695 PF10576 Iron-sulfur binding domain of endonuclease III WU08_RS19695 PF00730 HhH-GPD superfamily base excision DNA repair protein WU08_RS19695 PF00633 Helix-hairpin-helix motif WU08_RS19705 PF08241 Methyltransferase domain WU08_RS19715 PF02515 CoA-transferase family III WU08_RS19720 PF02515 CoA-transferase family III WU08_RS19730 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS19735 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS19740 PF00881 Nitroreductase family WU08_RS19750 PF00682 HMGL-like WU08_RS19755 PF00378 Enoyl-CoA hydratase/isomerase WU08_RS19760 PF02515 CoA-transferase family III WU08_RS19765 PF03401 Tripartite tricarboxylate transporter family receptor WU08_RS19775 PF00199 Catalase WU08_RS19775 PF06628 Catalase-related immune-responsive WU08_RS19780 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS19785 PF00005 ABC transporter WU08_RS19795 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WU08_RS19800 PF01546 Peptidase family M20/M25/M40 WU08_RS19800 PF07687 Peptidase dimerisation domain WU08_RS19805 PF00005 ABC transporter WU08_RS19805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS19810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU08_RS19810 PF00005 ABC transporter WU08_RS19815 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS19815 PF12911 N-terminal TM domain of oligopeptide transport permease C WU08_RS19820 PF00528 Binding-protein-dependent transport system inner membrane component WU08_RS19825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU08_RS19830 PF01926 50S ribosome-binding GTPase WU08_RS19830 PF12631 MnmE helical domain WU08_RS19830 PF10396 GTP-binding protein TrmE N-terminus WU08_RS19840 PF00072 Response regulator receiver domain WU08_RS19840 PF00486 Transcriptional regulatory protein, C terminal WU08_RS19845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU08_RS19845 PF00512 His Kinase A (phospho-acceptor) domain WU08_RS19860 PF01970 Tripartite tricarboxylate transporter TctA family WU08_RS19865 PF00155 Aminotransferase class I and II WU08_RS19870 PF00313 'Cold-shock' DNA-binding domain