WU08_RS00005 SM01228 WU08_RS00005 WU08_RS00025 SM00470 ParB-like nuclease domain WU08_RS00030 SM00870 WU08_RS00030 WU08_RS00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. WU08_RS00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. WU08_RS00075 SM00649 Ribosomal protein L11/L12 WU08_RS00100 SM00663 RNA polymerase I subunit A N-terminus WU08_RS00130 SM00448 cheY-homologous receiver domain WU08_RS00130 SM00862 Transcriptional regulatory protein, C terminal WU08_RS00200 SM00563 Phosphate acyltransferases WU08_RS00240 SM00421 helix_turn_helix, Lux Regulon WU08_RS00290 SM00382 ATPases associated with a variety of cellular activities WU08_RS00305 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS00400 SM00387 Histidine kinase-like ATPases WU08_RS00410 SM00644 WU08_RS00410 WU08_RS00425 SM00382 ATPases associated with a variety of cellular activities WU08_RS00425 SM00962 SRP54-type protein, GTPase domain WU08_RS00425 SM00963 SRP54-type protein, helical bundle domain WU08_RS00525 SM00382 ATPases associated with a variety of cellular activities WU08_RS00545 SM00936 Penicillin-binding protein 5, C-terminal domain WU08_RS00565 SM00729 Elongator protein 3, MiaB family, Radical SAM WU08_RS00610 SM00836 DALR anticodon binding domain WU08_RS00610 SM01016 Arginyl tRNA synthetase N terminal dom WU08_RS00645 SM00382 ATPases associated with a variety of cellular activities WU08_RS00660 SM00382 ATPases associated with a variety of cellular activities WU08_RS00695 SM00917 LeuA allosteric (dimerisation) domain WU08_RS00750 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS00750 SM00895 WU08_RS00750 WU08_RS00780 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS00790 SM00797 Allophanate hydrolase subunit 2 WU08_RS00795 SM00796 Allophanate hydrolase subunit 1 WU08_RS00820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS00820 SM00387 Histidine kinase-like ATPases WU08_RS00820 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS00825 SM00448 cheY-homologous receiver domain WU08_RS00825 SM00862 Transcriptional regulatory protein, C terminal WU08_RS00830 SM00091 PAS domain WU08_RS00830 SM00387 Histidine kinase-like ATPases WU08_RS00830 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS00835 SM00448 cheY-homologous receiver domain WU08_RS00835 SM00862 Transcriptional regulatory protein, C terminal WU08_RS00845 SM00978 WU08_RS00845 WU08_RS00870 SM00382 ATPases associated with a variety of cellular activities WU08_RS00885 SM00487 DEAD-like helicases superfamily WU08_RS00885 SM00490 helicase superfamily c-terminal domain WU08_RS00930 SM00450 Rhodanese Homology Domain WU08_RS01025 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS01025 SM00895 WU08_RS01025 WU08_RS01075 SM00882 Coenzyme A transferase WU08_RS01080 SM00882 Coenzyme A transferase WU08_RS01085 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS01105 SM00869 Autotransporter beta-domain WU08_RS01140 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS01140 SM00895 WU08_RS01140 WU08_RS01210 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS01210 SM00895 WU08_RS01210 WU08_RS01250 SM00382 ATPases associated with a variety of cellular activities WU08_RS01265 SM00853 MutL C terminal dimerisation domain WU08_RS01265 SM01340 WU08_RS01265 WU08_RS01275 SM00646 WU08_RS01275 WU08_RS01355 SM00382 ATPases associated with a variety of cellular activities WU08_RS01360 SM00382 ATPases associated with a variety of cellular activities WU08_RS01445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WU08_RS01475 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS01485 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS01535 SM00347 helix_turn_helix multiple antibiotic resistance protein WU08_RS01560 SM00382 ATPases associated with a variety of cellular activities WU08_RS01565 SM00382 ATPases associated with a variety of cellular activities WU08_RS01635 SM00732 Likely ribonuclease with RNase H fold. WU08_RS01650 SM00563 Phosphate acyltransferases WU08_RS01700 SM00849 Metallo-beta-lactamase superfamily WU08_RS01730 SM00267 diguanylate cyclase WU08_RS01755 SM00382 ATPases associated with a variety of cellular activities WU08_RS01775 SM00965 Secretin and TonB N terminus short domain WU08_RS01820 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS01820 SM00895 WU08_RS01820 WU08_RS01835 SM01236 WU08_RS01835 WU08_RS01855 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS01880 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WU08_RS01895 SM00845 GatB domain WU08_RS01970 SM00749 bacterial OsmY and nodulation domain WU08_RS02035 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS02075 SM00450 Rhodanese Homology Domain WU08_RS02180 SM00479 WU08_RS02180 WU08_RS02260 SM00829 Enoylreductase WU08_RS02270 SM00881 CoA binding domain WU08_RS02300 SM00344 helix_turn_helix ASNC type WU08_RS02325 SM00881 CoA binding domain WU08_RS02335 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS02365 SM00937 WU08_RS02365 WU08_RS02395 SM01092 CO dehydrogenase flavoprotein C-terminal domain WU08_RS02400 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU08_RS02455 SM00382 ATPases associated with a variety of cellular activities WU08_RS02475 SM00116 Domain in cystathionine beta-synthase and other proteins. WU08_RS02505 SM00834 Putative regulatory protein WU08_RS02525 SM00155 Phospholipase D. Active site motifs. WU08_RS02565 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS02680 SM00382 ATPases associated with a variety of cellular activities WU08_RS02705 SM00487 DEAD-like helicases superfamily WU08_RS02705 SM00490 helicase superfamily c-terminal domain WU08_RS02725 SM00382 ATPases associated with a variety of cellular activities WU08_RS02785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WU08_RS02795 SM00905 Dihydroneopterin aldolase WU08_RS02825 SM00925 MltA specific insert domain WU08_RS02900 SM00903 Flavin reductase like domain WU08_RS02925 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS02925 SM00866 WU08_RS02925 WU08_RS02960 SM00382 ATPases associated with a variety of cellular activities WU08_RS03050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS03050 SM00387 Histidine kinase-like ATPases WU08_RS03055 SM00448 cheY-homologous receiver domain WU08_RS03055 SM00862 Transcriptional regulatory protein, C terminal WU08_RS03095 SM00257 Lysin motif WU08_RS03100 SM00849 Metallo-beta-lactamase superfamily WU08_RS03180 SM00822 WU08_RS03180 WU08_RS03190 SM00382 ATPases associated with a variety of cellular activities WU08_RS03195 SM00382 ATPases associated with a variety of cellular activities WU08_RS03275 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS03275 SM00866 WU08_RS03275 WU08_RS03295 SM00422 helix_turn_helix, mercury resistance WU08_RS03325 SM00988 UreE urease accessory protein, N-terminal domain WU08_RS03380 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS03410 SM00984 UDP binding domain WU08_RS03470 SM00448 cheY-homologous receiver domain WU08_RS03470 SM00862 Transcriptional regulatory protein, C terminal WU08_RS03475 SM00387 Histidine kinase-like ATPases WU08_RS03475 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS03510 SM00849 Metallo-beta-lactamase superfamily WU08_RS03515 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain WU08_RS03515 SM01232 WU08_RS03515 WU08_RS03520 SM00028 Tetratricopeptide repeats WU08_RS03540 SM01400 WU08_RS03540 WU08_RS03645 SM00869 Autotransporter beta-domain WU08_RS03655 SM00862 Transcriptional regulatory protein, C terminal WU08_RS03695 SM00422 helix_turn_helix, mercury resistance WU08_RS03695 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS03740 SM00344 helix_turn_helix ASNC type WU08_RS03740 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS03785 SM00382 ATPases associated with a variety of cellular activities WU08_RS03790 SM00155 Phospholipase D. Active site motifs. WU08_RS03800 SM00986 Uracil DNA glycosylase superfamily WU08_RS03800 SM00987 UreE urease accessory protein, C-terminal domain WU08_RS03805 SM00487 DEAD-like helicases superfamily WU08_RS03805 SM00490 helicase superfamily c-terminal domain WU08_RS03860 SM00996 S-adenosyl-L-homocysteine hydrolase WU08_RS03860 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WU08_RS03930 SM00382 ATPases associated with a variety of cellular activities WU08_RS03945 SM00833 Cobalamin synthesis protein cobW C-terminal domain WU08_RS03960 SM00382 ATPases associated with a variety of cellular activities WU08_RS03960 SM01086 C-terminal, D2-small domain, of ClpB protein WU08_RS04065 SM00344 helix_turn_helix ASNC type WU08_RS04100 SM00151 SWI complex, BAF60b domains WU08_RS04115 SM00382 ATPases associated with a variety of cellular activities WU08_RS04185 SM00842 Cell division protein FtsA WU08_RS04190 SM00864 Tubulin/FtsZ family, GTPase domain WU08_RS04190 SM00865 Tubulin/FtsZ family, C-terminal domain WU08_RS04210 SM00957 SecA DEAD-like domain WU08_RS04210 SM00958 SecA preprotein cross-linking domain WU08_RS04240 SM00344 helix_turn_helix ASNC type WU08_RS04270 SM00955 WU08_RS04270 WU08_RS04300 SM00878 Biotin carboxylase C-terminal domain WU08_RS04380 SM00344 helix_turn_helix ASNC type WU08_RS04415 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS04415 SM00895 WU08_RS04415 WU08_RS04425 SM00487 DEAD-like helicases superfamily WU08_RS04425 SM00490 helicase superfamily c-terminal domain WU08_RS04445 SM00382 ATPases associated with a variety of cellular activities WU08_RS04485 SM00859 Semialdehyde dehydrogenase, NAD binding domain WU08_RS04515 SM00363 S4 RNA-binding domain WU08_RS04610 SM00387 Histidine kinase-like ATPases WU08_RS04615 SM00448 cheY-homologous receiver domain WU08_RS04640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WU08_RS04690 SM00257 Lysin motif WU08_RS04730 SM00528 Domain in histone-like proteins of HNS family WU08_RS04750 SM00912 haemagglutination activity domain WU08_RS04785 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS04805 SM01002 Alanine dehydrogenase/PNT, C-terminal domain WU08_RS04805 SM01003 Alanine dehydrogenase/PNT, N-terminal domain WU08_RS04875 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS04875 SM00895 WU08_RS04875 WU08_RS04915 SM00382 ATPases associated with a variety of cellular activities WU08_RS04930 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS04965 SM00382 ATPases associated with a variety of cellular activities WU08_RS04990 SM00248 ankyrin repeats WU08_RS05035 SM00344 helix_turn_helix ASNC type WU08_RS05060 SM00382 ATPases associated with a variety of cellular activities WU08_RS05075 SM00829 Enoylreductase WU08_RS05100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WU08_RS05125 SM00822 WU08_RS05125 WU08_RS05210 SM00822 WU08_RS05210 WU08_RS05235 SM00422 helix_turn_helix, mercury resistance WU08_RS05265 SM00382 ATPases associated with a variety of cellular activities WU08_RS05300 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS05300 SM00895 WU08_RS05300 WU08_RS05355 SM00382 ATPases associated with a variety of cellular activities WU08_RS05355 SM00930 WU08_RS05355 WU08_RS05410 SM00116 Domain in cystathionine beta-synthase and other proteins. WU08_RS05410 SM00924 MgtE intracellular N domain WU08_RS05435 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS05450 SM00861 Transketolase, pyrimidine binding domain WU08_RS05485 SM00382 ATPases associated with a variety of cellular activities WU08_RS05500 SM00670 Large family of predicted nucleotide-binding domains WU08_RS05585 SM00822 WU08_RS05585 WU08_RS05650 SM00357 Cold shock protein domain WU08_RS05660 SM01359 WU08_RS05660 WU08_RS05660 SM01360 WU08_RS05660 WU08_RS05670 SM00382 ATPases associated with a variety of cellular activities WU08_RS05670 SM01086 C-terminal, D2-small domain, of ClpB protein WU08_RS05715 SM00382 ATPases associated with a variety of cellular activities WU08_RS05720 SM00382 ATPases associated with a variety of cellular activities WU08_RS05740 SM00869 Autotransporter beta-domain WU08_RS05750 SM00938 Nitrogen regulatory protein P-II WU08_RS05820 SM00422 helix_turn_helix, mercury resistance WU08_RS05845 SM00729 Elongator protein 3, MiaB family, Radical SAM WU08_RS05845 SM00876 Biotin and Thiamin Synthesis associated domain WU08_RS05895 SM00852 Probable molybdopterin binding domain WU08_RS05900 SM00852 Probable molybdopterin binding domain WU08_RS05905 SM00729 Elongator protein 3, MiaB family, Radical SAM WU08_RS05940 SM00938 Nitrogen regulatory protein P-II WU08_RS06000 SM00479 WU08_RS06000 WU08_RS06100 SM01211 WU08_RS06100 WU08_RS06105 SM00912 haemagglutination activity domain WU08_RS06120 SM00347 helix_turn_helix multiple antibiotic resistance protein WU08_RS06125 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS06130 SM01007 Class II Aldolase and Adducin N-terminal domain WU08_RS06165 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS06170 SM01130 WU08_RS06170 WU08_RS06215 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS06225 SM00420 helix_turn_helix, Deoxyribose operon repressor WU08_RS06225 SM01134 WU08_RS06225 WU08_RS06230 SM00382 ATPases associated with a variety of cellular activities WU08_RS06235 SM00382 ATPases associated with a variety of cellular activities WU08_RS06270 SM00344 helix_turn_helix ASNC type WU08_RS06310 SM00869 Autotransporter beta-domain WU08_RS06320 SM00116 Domain in cystathionine beta-synthase and other proteins. WU08_RS06320 SM01240 WU08_RS06320 WU08_RS06335 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS06360 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS06375 SM00382 ATPases associated with a variety of cellular activities WU08_RS06420 SM00849 Metallo-beta-lactamase superfamily WU08_RS06420 SM01027 Beta-Casp domain WU08_RS06445 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS06465 SM00829 Enoylreductase WU08_RS06475 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS06520 SM00382 ATPases associated with a variety of cellular activities WU08_RS06525 SM00354 helix_turn _helix lactose operon repressor WU08_RS06585 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS06625 SM00873 B3/4 domain WU08_RS06625 SM00874 tRNA synthetase B5 domain WU08_RS06625 SM00896 Ferredoxin-fold anticodon binding domain WU08_RS06630 SM00411 bacterial (prokaryotic) histone like domain WU08_RS06635 SM00422 helix_turn_helix, mercury resistance WU08_RS06740 SM00822 WU08_RS06740 WU08_RS06755 SM00382 ATPases associated with a variety of cellular activities WU08_RS06770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS06770 SM00387 Histidine kinase-like ATPases WU08_RS06770 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS06775 SM00448 cheY-homologous receiver domain WU08_RS06775 SM00862 Transcriptional regulatory protein, C terminal WU08_RS06780 SM00382 ATPases associated with a variety of cellular activities WU08_RS06810 SM00881 CoA binding domain WU08_RS06880 SM00858 WU08_RS06880 WU08_RS06890 SM00240 Forkhead associated domain WU08_RS06890 SM00382 ATPases associated with a variety of cellular activities WU08_RS07040 SM00271 DnaJ molecular chaperone homology domain WU08_RS07065 SM00382 ATPases associated with a variety of cellular activities WU08_RS07090 SM01329 WU08_RS07090 WU08_RS07110 SM00448 cheY-homologous receiver domain WU08_RS07110 SM00862 Transcriptional regulatory protein, C terminal WU08_RS07165 SM00463 Small MutS-related domain WU08_RS07175 SM00843 WU08_RS07175 WU08_RS07185 SM00382 ATPases associated with a variety of cellular activities WU08_RS07215 SM00267 diguanylate cyclase WU08_RS07240 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS07260 SM01006 Siderophore biosynthesis protein domain WU08_RS07310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. WU08_RS07310 SM00267 diguanylate cyclase WU08_RS07330 SM00421 helix_turn_helix, Lux Regulon WU08_RS07330 SM00448 cheY-homologous receiver domain WU08_RS07335 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain WU08_RS07385 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS07400 SM00382 ATPases associated with a variety of cellular activities WU08_RS07420 SM00834 Putative regulatory protein WU08_RS07435 SM00421 helix_turn_helix, Lux Regulon WU08_RS07465 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS07480 SM01001 AIR carboxylase WU08_RS07495 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS07500 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS07510 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS07510 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. WU08_RS07520 SM00382 ATPases associated with a variety of cellular activities WU08_RS07610 SM00382 ATPases associated with a variety of cellular activities WU08_RS07620 SM00493 WU08_RS07620 WU08_RS07695 SM00533 DNA-binding domain of DNA mismatch repair MUTS family WU08_RS07695 SM00534 ATPase domain of DNA mismatch repair MUTS family WU08_RS07700 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. WU08_RS07715 SM01130 WU08_RS07715 WU08_RS07735 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS07735 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. WU08_RS07745 SM00382 ATPases associated with a variety of cellular activities WU08_RS07750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WU08_RS07750 SM00954 Region found in RelA / SpoT proteins WU08_RS07755 SM01409 WU08_RS07755 WU08_RS07760 SM00072 Guanylate kinase homologues. WU08_RS07775 SM00822 WU08_RS07775 WU08_RS07790 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS07825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). WU08_RS07825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS07830 SM00052 Putative diguanylate phosphodiesterase WU08_RS07830 SM00267 diguanylate cyclase WU08_RS07845 SM00729 Elongator protein 3, MiaB family, Radical SAM WU08_RS07850 SM01230 WU08_RS07850 WU08_RS07855 SM00091 PAS domain WU08_RS07855 SM00387 Histidine kinase-like ATPases WU08_RS07855 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS07860 SM00382 ATPases associated with a variety of cellular activities WU08_RS07860 SM00448 cheY-homologous receiver domain WU08_RS07885 SM00382 ATPases associated with a variety of cellular activities WU08_RS07930 SM00487 DEAD-like helicases superfamily WU08_RS07930 SM00490 helicase superfamily c-terminal domain WU08_RS07980 SM00382 ATPases associated with a variety of cellular activities WU08_RS08005 SM00984 UDP binding domain WU08_RS08055 SM00382 ATPases associated with a variety of cellular activities WU08_RS08060 SM00382 ATPases associated with a variety of cellular activities WU08_RS08115 SM00327 von Willebrand factor (vWF) type A domain WU08_RS08120 SM00028 Tetratricopeptide repeats WU08_RS08120 SM00327 von Willebrand factor (vWF) type A domain WU08_RS08160 SM00421 helix_turn_helix, Lux Regulon WU08_RS08160 SM00448 cheY-homologous receiver domain WU08_RS08165 SM00869 Autotransporter beta-domain WU08_RS08170 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS08275 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WU08_RS08290 SM00822 WU08_RS08290 WU08_RS08390 SM00382 ATPases associated with a variety of cellular activities WU08_RS08395 SM00382 ATPases associated with a variety of cellular activities WU08_RS08475 SM00248 ankyrin repeats WU08_RS08480 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS08485 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS08485 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. WU08_RS08495 SM00382 ATPases associated with a variety of cellular activities WU08_RS08505 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WU08_RS08545 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS08545 SM00895 WU08_RS08545 WU08_RS08590 SM00052 Putative diguanylate phosphodiesterase WU08_RS08595 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS08595 SM00073 Histidine Phosphotransfer domain WU08_RS08595 SM00091 PAS domain WU08_RS08595 SM00387 Histidine kinase-like ATPases WU08_RS08595 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS08595 SM00448 cheY-homologous receiver domain WU08_RS08600 SM00421 helix_turn_helix, Lux Regulon WU08_RS08600 SM00448 cheY-homologous receiver domain WU08_RS08605 SM00912 haemagglutination activity domain WU08_RS08700 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS08720 SM01091 Transporter associated domain WU08_RS08740 SM00028 Tetratricopeptide repeats WU08_RS08745 SM00840 WU08_RS08745 WU08_RS08750 SM00478 endonuclease III WU08_RS08865 SM00382 ATPases associated with a variety of cellular activities WU08_RS08880 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS08885 SM00881 CoA binding domain WU08_RS08915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WU08_RS08940 SM00028 Tetratricopeptide repeats WU08_RS08955 SM00347 helix_turn_helix multiple antibiotic resistance protein WU08_RS08960 SM00421 helix_turn_helix, Lux Regulon WU08_RS08965 SM00421 helix_turn_helix, Lux Regulon WU08_RS09010 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS09030 SM00318 Staphylococcal nuclease homologues WU08_RS09050 SM00382 ATPases associated with a variety of cellular activities WU08_RS09055 SM00347 helix_turn_helix multiple antibiotic resistance protein WU08_RS09100 SM00858 WU08_RS09100 WU08_RS09130 SM00028 Tetratricopeptide repeats WU08_RS09145 SM00382 ATPases associated with a variety of cellular activities WU08_RS09175 SM00841 Elongation factor P, C-terminal WU08_RS09175 SM01185 WU08_RS09175 WU08_RS09235 SM00479 WU08_RS09235 WU08_RS09385 SM00347 helix_turn_helix multiple antibiotic resistance protein WU08_RS09390 SM00411 bacterial (prokaryotic) histone like domain WU08_RS09445 SM00382 ATPases associated with a variety of cellular activities WU08_RS09465 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS09465 SM00895 WU08_RS09465 WU08_RS09510 SM00382 ATPases associated with a variety of cellular activities WU08_RS09530 SM00862 Transcriptional regulatory protein, C terminal WU08_RS09565 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WU08_RS09565 SM00465 GIY-YIG type nucleases (URI domain) WU08_RS09735 SM00822 WU08_RS09735 WU08_RS09820 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU08_RS09830 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS09840 SM00464 Found in ATP-dependent protease La (LON) WU08_RS09875 SM00382 ATPases associated with a variety of cellular activities WU08_RS09895 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS09895 SM00895 WU08_RS09895 WU08_RS09910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WU08_RS09930 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS09970 SM00382 ATPases associated with a variety of cellular activities WU08_RS10075 SM00382 ATPases associated with a variety of cellular activities WU08_RS10125 SM00400 zinc finger WU08_RS10125 SM00493 WU08_RS10125 WU08_RS10125 SM00766 DNA primase DnaG DnaB-binding WU08_RS10140 SM00788 Adenylosuccinate synthetase WU08_RS10150 SM00244 prohibitin homologues WU08_RS10155 SM00244 prohibitin homologues WU08_RS10175 SM00382 ATPases associated with a variety of cellular activities WU08_RS10180 SM00564 beta-propeller repeat WU08_RS10210 SM00562 WU08_RS10210 WU08_RS10225 SM00448 cheY-homologous receiver domain WU08_RS10230 SM00387 Histidine kinase-like ATPases WU08_RS10230 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS10280 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain WU08_RS10330 SM00382 ATPases associated with a variety of cellular activities WU08_RS10395 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS10395 SM00866 WU08_RS10395 WU08_RS10450 SM00271 DnaJ molecular chaperone homology domain WU08_RS10475 SM00226 Low molecular weight phosphatase family WU08_RS10480 SM00487 DEAD-like helicases superfamily WU08_RS10480 SM00490 helicase superfamily c-terminal domain WU08_RS10495 SM00869 Autotransporter beta-domain WU08_RS10525 SM00882 Coenzyme A transferase WU08_RS10530 SM00882 Coenzyme A transferase WU08_RS10585 SM00382 ATPases associated with a variety of cellular activities WU08_RS10585 SM00464 Found in ATP-dependent protease La (LON) WU08_RS10590 SM00382 ATPases associated with a variety of cellular activities WU08_RS10590 SM00994 ClpX C4-type zinc finger WU08_RS10590 SM01086 C-terminal, D2-small domain, of ClpB protein WU08_RS10620 SM00357 Cold shock protein domain WU08_RS10635 SM00869 Autotransporter beta-domain WU08_RS10670 SM00382 ATPases associated with a variety of cellular activities WU08_RS10675 SM00965 Secretin and TonB N terminus short domain WU08_RS10705 SM00904 Riboflavin kinase WU08_RS10730 SM00344 helix_turn_helix ASNC type WU08_RS10795 SM00749 bacterial OsmY and nodulation domain WU08_RS10850 SM00422 helix_turn_helix, mercury resistance WU08_RS10875 SM00257 Lysin motif WU08_RS10890 SM01207 WU08_RS10890 WU08_RS10935 SM00347 helix_turn_helix multiple antibiotic resistance protein WU08_RS10970 SM00869 Autotransporter beta-domain WU08_RS10980 SM00155 Phospholipase D. Active site motifs. WU08_RS10995 SM01005 Alanine racemase, C-terminal domain WU08_RS11005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS11005 SM00331 Sigma factor PP2C-like phosphatases WU08_RS11005 SM01049 WU08_RS11005 WU08_RS11080 SM00382 ATPases associated with a variety of cellular activities WU08_RS11195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). WU08_RS11195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS11240 SM00382 ATPases associated with a variety of cellular activities WU08_RS11255 SM00450 Rhodanese Homology Domain WU08_RS11270 SM00829 Enoylreductase WU08_RS11285 SM00347 helix_turn_helix multiple antibiotic resistance protein WU08_RS11305 SM01329 WU08_RS11305 WU08_RS11310 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS11330 SM00382 ATPases associated with a variety of cellular activities WU08_RS11395 SM01209 WU08_RS11395 WU08_RS11395 SM01210 WU08_RS11395 WU08_RS11425 SM00869 Autotransporter beta-domain WU08_RS11465 SM00316 Ribosomal protein S1-like RNA-binding domain WU08_RS11485 SM00382 ATPases associated with a variety of cellular activities WU08_RS11540 SM00481 DNA polymerase alpha chain like domain WU08_RS11550 SM00382 ATPases associated with a variety of cellular activities WU08_RS11550 SM00487 DEAD-like helicases superfamily WU08_RS11550 SM00490 helicase superfamily c-terminal domain WU08_RS11550 SM00847 Helicase associated domain (HA2) Add an annotation WU08_RS11615 SM00382 ATPases associated with a variety of cellular activities WU08_RS11700 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS11700 SM00866 WU08_RS11700 WU08_RS11740 SM00981 WU08_RS11740 WU08_RS11795 SM00028 Tetratricopeptide repeats WU08_RS11795 SM00862 Transcriptional regulatory protein, C terminal WU08_RS11805 SM01192 WU08_RS11805 WU08_RS11805 SM01193 WU08_RS11805 WU08_RS11860 SM00382 ATPases associated with a variety of cellular activities WU08_RS11875 SM00882 Coenzyme A transferase WU08_RS12035 SM00358 Double-stranded RNA binding motif WU08_RS12035 SM00535 Ribonuclease III family WU08_RS12045 SM00838 Elongation factor G C-terminus WU08_RS12050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WU08_RS12075 SM00825 Beta-ketoacyl synthase WU08_RS12085 SM00822 WU08_RS12085 WU08_RS12090 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. WU08_RS12125 SM00644 WU08_RS12125 WU08_RS12185 SM00859 Semialdehyde dehydrogenase, NAD binding domain WU08_RS12190 SM01329 WU08_RS12190 WU08_RS12210 SM00382 ATPases associated with a variety of cellular activities WU08_RS12245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain WU08_RS12285 SM00852 Probable molybdopterin binding domain WU08_RS12305 SM00052 Putative diguanylate phosphodiesterase WU08_RS12325 SM00382 ATPases associated with a variety of cellular activities WU08_RS12335 SM00855 Phosphoglycerate mutase family WU08_RS12345 SM00851 MGS-like domain WU08_RS12345 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WU08_RS12350 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain WU08_RS12410 SM00267 diguanylate cyclase WU08_RS12415 SM00244 prohibitin homologues WU08_RS12475 SM00935 Outer membrane protein (OmpH-like) WU08_RS12485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WU08_RS12530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WU08_RS12625 SM00382 ATPases associated with a variety of cellular activities WU08_RS12690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) WU08_RS12690 SM00091 PAS domain WU08_RS12690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). WU08_RS12690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS12695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). WU08_RS12695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS12700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). WU08_RS12700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS12715 SM00047 Lysozyme subfamily 2 WU08_RS12760 SM00858 WU08_RS12760 WU08_RS12775 SM00382 ATPases associated with a variety of cellular activities WU08_RS12775 SM00962 SRP54-type protein, GTPase domain WU08_RS12795 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS12805 SM00382 ATPases associated with a variety of cellular activities WU08_RS12820 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain WU08_RS12840 SM00354 helix_turn _helix lactose operon repressor WU08_RS12865 SM00881 CoA binding domain WU08_RS12870 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS12870 SM00895 WU08_RS12870 WU08_RS12895 SM00869 Autotransporter beta-domain WU08_RS12920 SM00155 Phospholipase D. Active site motifs. WU08_RS12965 SM00642 Alpha-amylase domain WU08_RS12970 SM00642 Alpha-amylase domain WU08_RS12975 SM00642 Alpha-amylase domain WU08_RS12980 SM00642 Alpha-amylase domain WU08_RS12985 SM00642 Alpha-amylase domain WU08_RS12995 SM00642 Alpha-amylase domain WU08_RS13015 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS13145 SM00953 WU08_RS13145 WU08_RS13180 SM00382 ATPases associated with a variety of cellular activities WU08_RS13230 SM00382 ATPases associated with a variety of cellular activities WU08_RS13235 SM00382 ATPases associated with a variety of cellular activities WU08_RS13270 SM00434 DNA Topoisomerase IV WU08_RS13280 SM00387 Histidine kinase-like ATPases WU08_RS13280 SM00433 TopoisomeraseII WU08_RS13290 SM00357 Cold shock protein domain WU08_RS13290 SM00382 ATPases associated with a variety of cellular activities WU08_RS13290 SM00959 Rho termination factor, N-terminal domain WU08_RS13330 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs WU08_RS13330 SM00474 3'-5' exonuclease WU08_RS13330 SM00475 5'-3' exonuclease WU08_RS13330 SM00482 DNA polymerase A domain WU08_RS13370 SM00316 Ribosomal protein S1-like RNA-binding domain WU08_RS13380 SM00363 S4 RNA-binding domain WU08_RS13405 SM00833 Cobalamin synthesis protein cobW C-terminal domain WU08_RS13480 SM00382 ATPases associated with a variety of cellular activities WU08_RS13485 SM00327 von Willebrand factor (vWF) type A domain WU08_RS13510 SM01005 Alanine racemase, C-terminal domain WU08_RS13545 SM00382 ATPases associated with a variety of cellular activities WU08_RS13610 SM00869 Autotransporter beta-domain WU08_RS13615 SM00869 Autotransporter beta-domain WU08_RS13630 SM00382 ATPases associated with a variety of cellular activities WU08_RS13630 SM01086 C-terminal, D2-small domain, of ClpB protein WU08_RS13635 SM00100 Cyclic nucleotide-monophosphate binding domain WU08_RS13635 SM00419 helix_turn_helix, cAMP Regulatory protein WU08_RS13705 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS13720 SM00382 ATPases associated with a variety of cellular activities WU08_RS13785 SM01007 Class II Aldolase and Adducin N-terminal domain WU08_RS13810 SM00822 WU08_RS13810 WU08_RS13820 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain WU08_RS13875 SM00822 WU08_RS13875 WU08_RS13890 SM00363 S4 RNA-binding domain WU08_RS13900 SM00491 WU08_RS13900 WU08_RS13905 SM00316 Ribosomal protein S1-like RNA-binding domain WU08_RS13905 SM00732 Likely ribonuclease with RNase H fold. WU08_RS13970 SM00861 Transketolase, pyrimidine binding domain WU08_RS13980 SM00344 helix_turn_helix ASNC type WU08_RS13990 SM00919 Malic enzyme, NAD binding domain WU08_RS13990 SM01274 WU08_RS13990 WU08_RS14010 SM00481 DNA polymerase alpha chain like domain WU08_RS14020 SM00849 Metallo-beta-lactamase superfamily WU08_RS14045 SM00869 Autotransporter beta-domain WU08_RS14055 SM00382 ATPases associated with a variety of cellular activities WU08_RS14080 SM00822 WU08_RS14080 WU08_RS14105 SM00382 ATPases associated with a variety of cellular activities WU08_RS14125 SM00382 ATPases associated with a variety of cellular activities WU08_RS14135 SM00052 Putative diguanylate phosphodiesterase WU08_RS14135 SM00267 diguanylate cyclase WU08_RS14135 SM00387 Histidine kinase-like ATPases WU08_RS14135 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS14140 SM00448 cheY-homologous receiver domain WU08_RS14140 SM00862 Transcriptional regulatory protein, C terminal WU08_RS14160 SM00116 Domain in cystathionine beta-synthase and other proteins. WU08_RS14200 SM01103 WU08_RS14200 WU08_RS14210 SM00382 ATPases associated with a variety of cellular activities WU08_RS14255 SM00382 ATPases associated with a variety of cellular activities WU08_RS14280 SM00919 Malic enzyme, NAD binding domain WU08_RS14280 SM01274 WU08_RS14280 WU08_RS14330 SM00869 Autotransporter beta-domain WU08_RS14360 SM01323 WU08_RS14360 WU08_RS14385 SM00729 Elongator protein 3, MiaB family, Radical SAM WU08_RS14400 SM01091 Transporter associated domain WU08_RS14440 SM00448 cheY-homologous receiver domain WU08_RS14445 SM00448 cheY-homologous receiver domain WU08_RS14455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). WU08_RS14455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS14460 SM00260 Two component signalling adaptor domain WU08_RS14465 SM00073 Histidine Phosphotransfer domain WU08_RS14465 SM00260 Two component signalling adaptor domain WU08_RS14465 SM00387 Histidine kinase-like ATPases WU08_RS14465 SM01231 WU08_RS14465 WU08_RS14470 SM00448 cheY-homologous receiver domain WU08_RS14505 SM00316 Ribosomal protein S1-like RNA-binding domain WU08_RS14525 SM00852 Probable molybdopterin binding domain WU08_RS14545 SM00271 DnaJ molecular chaperone homology domain WU08_RS14600 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WU08_RS14605 SM00861 Transketolase, pyrimidine binding domain WU08_RS14640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) WU08_RS14640 SM00091 PAS domain WU08_RS14640 SM00387 Histidine kinase-like ATPases WU08_RS14640 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS14645 SM00421 helix_turn_helix, Lux Regulon WU08_RS14645 SM00448 cheY-homologous receiver domain WU08_RS14690 SM00363 S4 RNA-binding domain WU08_RS14740 SM00729 Elongator protein 3, MiaB family, Radical SAM WU08_RS14755 SM00382 ATPases associated with a variety of cellular activities WU08_RS14790 SM00893 Electron transfer flavoprotein domain WU08_RS14795 SM00893 Electron transfer flavoprotein domain WU08_RS14845 SM00411 bacterial (prokaryotic) histone like domain WU08_RS14850 SM00316 Ribosomal protein S1-like RNA-binding domain WU08_RS14870 SM00830 Chorismate mutase type II WU08_RS14880 SM00434 DNA Topoisomerase IV WU08_RS14990 SM00382 ATPases associated with a variety of cellular activities WU08_RS15040 SM00878 Biotin carboxylase C-terminal domain WU08_RS15045 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS15045 SM00866 WU08_RS15045 WU08_RS15125 SM00382 ATPases associated with a variety of cellular activities WU08_RS15170 SM01387 WU08_RS15170 WU08_RS15175 SM00316 Ribosomal protein S1-like RNA-binding domain WU08_RS15175 SM00322 K homology RNA-binding domain WU08_RS15205 SM00829 Enoylreductase WU08_RS15230 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS15290 SM00450 Rhodanese Homology Domain WU08_RS15315 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS15375 SM00014 Acid phosphatase homologues WU08_RS15435 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WU08_RS15440 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WU08_RS15525 SM00487 DEAD-like helicases superfamily WU08_RS15525 SM00490 helicase superfamily c-terminal domain WU08_RS15525 SM00982 WU08_RS15525 WU08_RS15525 SM01058 CarD-like/TRCF domain WU08_RS15585 SM00382 ATPases associated with a variety of cellular activities WU08_RS15605 SM00829 Enoylreductase WU08_RS15610 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS15610 SM00895 WU08_RS15610 WU08_RS15615 SM00869 Autotransporter beta-domain WU08_RS15620 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS15620 SM00895 WU08_RS15620 WU08_RS15650 SM00382 ATPases associated with a variety of cellular activities WU08_RS15665 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS15685 SM00382 ATPases associated with a variety of cellular activities WU08_RS15765 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase WU08_RS15770 SM00862 Transcriptional regulatory protein, C terminal WU08_RS15775 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS15790 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS15815 SM00965 Secretin and TonB N terminus short domain WU08_RS15820 SM00867 YceI-like domain WU08_RS15850 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS15870 SM00382 ATPases associated with a variety of cellular activities WU08_RS15935 SM00650 Ribosomal RNA adenine dimethylases WU08_RS15985 SM00382 ATPases associated with a variety of cellular activities WU08_RS16040 SM00448 cheY-homologous receiver domain WU08_RS16040 SM00862 Transcriptional regulatory protein, C terminal WU08_RS16280 SM00382 ATPases associated with a variety of cellular activities WU08_RS16285 SM00382 ATPases associated with a variety of cellular activities WU08_RS16310 SM00947 Carbonic anhydrase WU08_RS16325 SM00341 Helicase and RNase D C-terminal WU08_RS16325 SM00487 DEAD-like helicases superfamily WU08_RS16325 SM00490 helicase superfamily c-terminal domain WU08_RS16325 SM00956 WU08_RS16325 WU08_RS16330 SM00382 ATPases associated with a variety of cellular activities WU08_RS16345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WU08_RS16355 SM00798 AICARFT/IMPCHase bienzyme WU08_RS16355 SM00851 MGS-like domain WU08_RS16380 SM01011 Aminopeptidase P, N-terminal domain WU08_RS16455 SM00487 DEAD-like helicases superfamily WU08_RS16455 SM00490 helicase superfamily c-terminal domain WU08_RS16475 SM00852 Probable molybdopterin binding domain WU08_RS16480 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS16560 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS16560 SM00895 WU08_RS16560 WU08_RS16580 SM00919 Malic enzyme, NAD binding domain WU08_RS16580 SM01274 WU08_RS16580 WU08_RS16600 SM00382 ATPases associated with a variety of cellular activities WU08_RS16630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WU08_RS16665 SM00382 ATPases associated with a variety of cellular activities WU08_RS16665 SM00962 SRP54-type protein, GTPase domain WU08_RS16665 SM00963 SRP54-type protein, helical bundle domain WU08_RS16705 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS16745 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family WU08_RS16765 SM00869 Autotransporter beta-domain WU08_RS16775 SM00883 Chaperonin 10 Kd subunit WU08_RS16830 SM00267 diguanylate cyclase WU08_RS16835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WU08_RS16880 SM00155 Phospholipase D. Active site motifs. WU08_RS16915 SM01144 WU08_RS16915 WU08_RS16925 SM00316 Ribosomal protein S1-like RNA-binding domain WU08_RS16925 SM00357 Cold shock protein domain WU08_RS16925 SM00955 WU08_RS16925 WU08_RS16930 SM00967 RNA 2'-O ribose methyltransferase substrate binding WU08_RS16940 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. WU08_RS16945 SM00411 bacterial (prokaryotic) histone like domain WU08_RS16970 SM00448 cheY-homologous receiver domain WU08_RS16970 SM00862 Transcriptional regulatory protein, C terminal WU08_RS16975 SM00387 Histidine kinase-like ATPases WU08_RS16975 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS17030 SM01130 WU08_RS17030 WU08_RS17035 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS17035 SM00895 WU08_RS17035 WU08_RS17050 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS17065 SM00387 Histidine kinase-like ATPases WU08_RS17065 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS17075 SM00448 cheY-homologous receiver domain WU08_RS17075 SM00862 Transcriptional regulatory protein, C terminal WU08_RS17085 SM00986 Uracil DNA glycosylase superfamily WU08_RS17085 SM00987 UreE urease accessory protein, C-terminal domain WU08_RS17095 SM00968 SMC proteins Flexible Hinge Domain WU08_RS17100 SM00771 ZipA, C-terminal domain (FtsZ-binding) WU08_RS17105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WU08_RS17105 SM00292 breast cancer carboxy-terminal domain WU08_RS17105 SM00532 Ligase N family WU08_RS17130 SM00382 ATPases associated with a variety of cellular activities WU08_RS17155 SM00382 ATPases associated with a variety of cellular activities WU08_RS17185 SM00382 ATPases associated with a variety of cellular activities WU08_RS17190 SM00382 ATPases associated with a variety of cellular activities WU08_RS17195 SM00478 endonuclease III WU08_RS17195 SM00525 WU08_RS17195 WU08_RS17240 SM00954 Region found in RelA / SpoT proteins WU08_RS17280 SM00316 Ribosomal protein S1-like RNA-binding domain WU08_RS17285 SM00363 S4 RNA-binding domain WU08_RS17350 SM00926 Molybdopterin oxidoreductase Fe4S4 domain WU08_RS17365 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS17365 SM00895 WU08_RS17365 WU08_RS17375 SM00357 Cold shock protein domain WU08_RS17445 SM00838 Elongation factor G C-terminus WU08_RS17445 SM00889 Elongation factor G, domain IV WU08_RS17450 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS17475 SM01130 WU08_RS17475 WU08_RS17535 SM00881 CoA binding domain WU08_RS17540 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS17550 SM00861 Transketolase, pyrimidine binding domain WU08_RS17590 SM00382 ATPases associated with a variety of cellular activities WU08_RS17595 SM00382 ATPases associated with a variety of cellular activities WU08_RS17625 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS17645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WU08_RS17645 SM00245 tail specific protease WU08_RS17655 SM00855 Phosphoglycerate mutase family WU08_RS17660 SM00450 Rhodanese Homology Domain WU08_RS17720 SM00382 ATPases associated with a variety of cellular activities WU08_RS17740 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU08_RS17805 SM00347 helix_turn_helix multiple antibiotic resistance protein WU08_RS17820 SM00448 cheY-homologous receiver domain WU08_RS17825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WU08_RS17825 SM00387 Histidine kinase-like ATPases WU08_RS17825 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS17895 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS17915 SM00344 helix_turn_helix ASNC type WU08_RS17970 SM00729 Elongator protein 3, MiaB family, Radical SAM WU08_RS17990 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS17990 SM00895 WU08_RS17990 WU08_RS18035 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS18055 SM00869 Autotransporter beta-domain WU08_RS18085 SM01119 WU08_RS18085 WU08_RS18095 SM00244 prohibitin homologues WU08_RS18190 SM00387 Histidine kinase-like ATPases WU08_RS18190 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS18225 SM01234 WU08_RS18225 WU08_RS18240 SM00382 ATPases associated with a variety of cellular activities WU08_RS18240 SM00760 Bacterial dnaA protein helix-turn-helix domain WU08_RS18245 SM00480 DNA polymerase III beta subunit WU08_RS18250 SM00387 Histidine kinase-like ATPases WU08_RS18250 SM00433 TopoisomeraseII WU08_RS18255 SM00346 helix_turn_helix isocitrate lyase regulation WU08_RS18280 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS18280 SM00871 Bacterial transcription activator, effector binding domain WU08_RS18300 SM00422 helix_turn_helix, mercury resistance WU08_RS18305 SM00849 Metallo-beta-lactamase superfamily WU08_RS18335 SM00878 Biotin carboxylase C-terminal domain WU08_RS18335 SM01209 WU08_RS18335 WU08_RS18355 SM01119 WU08_RS18355 WU08_RS18390 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain WU08_RS18390 SM00437 Bacterial DNA topoisomerase I DNA-binding domain WU08_RS18390 SM00493 WU08_RS18390 WU08_RS18400 SM00382 ATPases associated with a variety of cellular activities WU08_RS18430 SM00344 helix_turn_helix ASNC type WU08_RS18440 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain WU08_RS18460 SM01018 B12 binding domain WU08_RS18540 SM00838 Elongation factor G C-terminus WU08_RS18540 SM00889 Elongation factor G, domain IV WU08_RS18550 SM01403 WU08_RS18550 WU08_RS18570 SM01382 WU08_RS18570 WU08_RS18570 SM01383 WU08_RS18570 WU08_RS18585 SM00322 K homology RNA-binding domain WU08_RS18620 SM01374 WU08_RS18620 WU08_RS18695 SM00363 S4 RNA-binding domain WU08_RS18695 SM01390 WU08_RS18695 WU08_RS18700 SM00662 RNA polymerases D WU08_RS18730 SM01004 Delta-aminolevulinic acid dehydratase WU08_RS18765 SM01219 WU08_RS18765 WU08_RS18785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WU08_RS18835 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS18835 SM00866 WU08_RS18835 WU08_RS18880 SM00382 ATPases associated with a variety of cellular activities WU08_RS18905 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS18905 SM00895 WU08_RS18905 WU08_RS18935 SM01130 WU08_RS18935 WU08_RS18950 SM00257 Lysin motif WU08_RS19005 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS19015 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS19020 SM00345 helix_turn_helix gluconate operon transcriptional repressor WU08_RS19035 SM00382 ATPases associated with a variety of cellular activities WU08_RS19050 SM00829 Enoylreductase WU08_RS19100 SM00382 ATPases associated with a variety of cellular activities WU08_RS19150 SM00984 UDP binding domain WU08_RS19240 SM00100 Cyclic nucleotide-monophosphate binding domain WU08_RS19265 SM00829 Enoylreductase WU08_RS19295 SM00382 ATPases associated with a variety of cellular activities WU08_RS19405 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS19495 SM00342 helix_turn_helix, arabinose operon control protein WU08_RS19615 SM00421 helix_turn_helix, Lux Regulon WU08_RS19655 SM00382 ATPases associated with a variety of cellular activities WU08_RS19670 SM00062 Bacterial periplasmic substrate-binding proteins WU08_RS19675 SM00382 ATPases associated with a variety of cellular activities WU08_RS19695 SM00478 endonuclease III WU08_RS19700 SM00530 Helix-turn-helix XRE-family like proteins WU08_RS19775 SM01060 WU08_RS19775 WU08_RS19785 SM00382 ATPases associated with a variety of cellular activities WU08_RS19805 SM00382 ATPases associated with a variety of cellular activities WU08_RS19810 SM00382 ATPases associated with a variety of cellular activities WU08_RS19840 SM00448 cheY-homologous receiver domain WU08_RS19840 SM00862 Transcriptional regulatory protein, C terminal WU08_RS19845 SM00387 Histidine kinase-like ATPases WU08_RS19845 SM00388 His Kinase A (phosphoacceptor) domain WU08_RS19870 SM00357 Cold shock protein domain