CXD84_RS00015    3394 ..    3417 +  -6.8  -2.96979   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCTGTTCC  51 16
CXD84_RS00020 NONE
CXD84_RS00025    5210 ..    5241 +  -3.6  -3.14344   ACGCGGCCAGCGGCG      CTTACCG-CGCCG GCTCGTA CGGCGTCGGGCAG      TTGCTGGCGGCCGTG  45 103
CXD84_RS00035    6413 ..    6434 +  -7.3  -4.09685   CTCAGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  67 116
CXD84_RS00040 NONE
CXD84_RS00045    6668 ..    6680 +  -2.7  -3.65046   GTCATGGGCACCATC                GAATT CTA AGTTC                TTCTTCAAGTCAGAA  53 28
         tuf    7926 ..    7960 + -18.1  -3.72893   AAGGCGCGGTTTTCC    CATGGATAGAGGGGCC GGAT GGCC-CTCTATCCATG     TTTGCTGGAAAAGTA  93 39
CXD84_RS00055 NONE
        secE NONE
        nusG    9056 ..    9074 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CXD84_RS00075   10300 ..   10321 + -14.5  -2.62184   ATAGAACTTTGGGCC           GCATCCGGA CTTG TCCGGATGC            TGCTGTCAAAGACCG  71 55
CXD84_RS00080   11043 ..   11056 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG CGTC CGGAA                TTCGCTGAACGACAA  41 31
CXD84_RS00085   11517 ..   11549 + -17.7  -4.35524   AGACCTCGCGTCGAC      GCCCGGGGACAGC GCTCTTA GCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 40
        rpoB NONE
        rpoC   20076 ..   20099 + -16.8   -4.4078   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 83
CXD84_RS00105   22150 ..   22174 +  -3.4  -3.02144   AGCCCCAGGCCAGCG          CCGCCTACTT CGTTC GAGCCGGCGG          TGTTGACGCGCGTAA  42 228
CXD84_RS00125   27452 ..   27486 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS00160 NONE
CXD84_RS00165   34454 ..   34511 + -16.7  -3.53224   ACCTGATGGCGCTGT GCGAACCCGCGCCATGACGCCGGGCCGG CGC CCGGCACGGCCCCGCGGCCCGGGC-CGC TTTGCGGGCCGACTA  86 9
CXD84_RS00175   35611 ..   35621 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS00180 NONE
        glyQ NONE
CXD84_RS00195 NONE
CXD84_RS00200   41644 ..   41662 +  -2.2  -2.53015   CAACTGCTGCAGGAG             GCCTGATC CAT GGCCTGGC             TGCGTTCGGCGCTGT  37 20
CXD84_RS00205 NONE
CXD84_RS00210   43260 ..   43285 +  -5.9  -3.74693   CCCTGCCGCAGTTCT         GAGCCCGCGCC GGCT GGCGCGGCCGA          TTTGCTACGATGACG  59 24
        gloA NONE
CXD84_RS00220   44649 ..   44659 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  57 407
CXD84_RS00230   46147 ..   46159 +  -6.2  -2.71144   GGCCACGCCCGGGGC                CGCC GGCCA GGCG                TAATTGGCCAGGCTG  47 509
CXD84_RS00240   47088 ..   47100 +  -6.2  -3.96531   AGTCTCGATTCGTGG                CGGC ATCAA GCCG                TTTATCCATATCTGA  64 315
CXD84_RS00250   48522 ..   48560 + -10.9  -3.14132   GGGCCAGGTTGATCT  CCAGCGGCGCGGCGGC GCGGGAAG GCCGCCGCGAC-CGGG   TTGGTGCCCAGCAGC  64 520
CXD84_RS00260 NONE
        metW   51127 ..   51137 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 97
CXD84_RS00275   52147 ..   52162 +  -3.2  -2.70932   TCACAGCTAGCAGGA              CCGG CGCGCCTA CCGG               TCGTTCCACGGGAGA  40 31
CXD84_RS00280   53486 ..   53501 +  -7.5  -3.14527   CGCTACCCGCGCAAG              CCGCC CGCAGT GGCGG               TATTGATAACAATTC  54 71
CXD84_RS00385   71119 ..   71129 +  -4.6  -3.07013   CAAGCATGGACGCAT                 GTCG CAA CGGC                 TGTATTGACCCAGTG  45 59
CXD84_RS00390   71717 ..   71727 +  -4.6  -3.10464   ATTCAACAAGAACAC                 CGTG CAG CGCG                 TGTTCCAGTTGATGG  47 249
        htpG   74611 ..   74643 +  -6.8  -4.08767   ATGCGCTCGATCAAG      GGGTGGCTGTCCCC GCGCG GGGGGCTGACACCG      TTTTGGCAGGCTGGC  67 43
CXD84_RS00430   78853 ..   78887 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS00440   80841 ..   80857 +  -2.1  -4.07568   AGTCTTCCCCGATCA              GCAGTTC TTC GTACAGC              TTTTCCCCGGGCCGC  58 213
        waaC   94021 ..   94047 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ACA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CXD84_RS00505   95323 ..   95333 +  -8.2  -3.14132   ATTGGCTGGGATAGC                 CCGC CGT GCGG                 TTCGTCAGGGCCGCA  56 27
CXD84_RS00525 NONE
CXD84_RS00530   99607 ..   99621 +  -4.2  -5.01732   CATGCCGGCCACCAT               CCCG CTGCGGC CGGG               TTTTTTCCAGCGCTT  81 404
CXD84_RS00540 NONE
CXD84_RS00545  101459 ..  101472 +  -2.4  -3.51934   TGACCCGGCCCGCGT               TGCA TCACGT TGCA                TGTTTGTAAGCGCAA  48 38
CXD84_RS00550 NONE
CXD84_RS00555  103792 ..  103817 + -13.2  -3.61178   CTGTAGCGGCCGGCA         GGCGGGCGGC CCTGGC GCCGCCCGCG          TTTCGCGTCCCTCGC  77 35
CXD84_RS00560 NONE
        lipB  104827 ..  104849 + -12.7  -3.31792   CTTTTTTGTCTCGAA           CCGGAGCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  71 49
        lipA  105902 ..  105922 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
        metC  111548 ..  111567 + -10.7  -3.89346   CCCATCAACGACAAA            GCCTCCG CATGGA CGGAGGC             TTTGTGGCGTCGGGG  77 53
CXD84_RS00620 NONE
CXD84_RS00625  115786 ..  115814 +    -6  -3.78419   GTCCGCAGGGGGACT        GGCACCGG CCAAATCCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 100
CXD84_RS00630  117065 ..  117080 +  -5.4  -2.72991   CCATGCTCCATCCGG              GGACAGG CAC CC-GTCC              TCCTTCAGCGTATCC  45 80
CXD84_RS00695  129776 ..  129818 +  -5.5   -3.1247   ACGGATCGCCGTCGA TACGGTGGCGGACCAGCTGC CAGG GCTGCTGCTGCGCCAG-GTA TTCGCTGTCGAAGAT  47 466
        rpoN  133635 ..  133650 +  -6.2  -4.30833   CCACGCCGCGGGTCG              TTAGGA CGCC TCCTAA               TTTGTTCCTGATTTC  73 22
CXD84_RS00715  134047 ..  134078 + -16.6  -3.96148   GAGCGACGCGGCGCC      TTGCGCCAGCCGGC TCAT GCTGCCTGGCGCAA       TTTATCGTCCCCACA  93 39
CXD84_RS00750  143837 ..  143850 +  -5.2  -3.77188   CGGGACGGATCCAGG               GCGC CGCATT GCGC                TATTTATGTTTCAAT  60 70
CXD84_RS00755  144610 ..  144630 +  -8.9  -3.96148   GAGCCGGGCGACGAC            CGCCTGCGC GTC GCGTAGGCC            TTTCTCCTCACGACA  70 8
CXD84_RS00785  151340 ..  151373 +  -7.4   -3.1505   CGGCCACGCCGGCCA     GCGCGCCGACCTGGT AGACC ACCAGGTCGTAG-GC     TTCCTGCGGGGTGAT  54 510
CXD84_RS00810  155109 ..  155130 +  -6.5  -4.28361   GAAGCGCACCAGTTT           C-TCGGCCAC TTC GCGGCCGATG           TTTTCCTGGGATTCC  72 374
        ubiE  161865 ..  161880 + -11.8  -3.53811   AAGGTTTGCCGCGCA              GGCCCC AACC GGGGCC               TTTCCAGCCGCTCCC  72 121
CXD84_RS00850  163035 ..  163062 + -19.2  -3.30007   CGGCCGGGCTGCACC        GTGAACCGGCCC GCCA GGGCCGGTTCGC         TTATGGGCCGGTCTT 100 103
CXD84_RS00855 NONE
        ubiB  165685 ..  165717 +  -4.8  -3.13403   TCAAGATGAACGCGA     TCACCGAGTGGGCGGC CTT GCCGGCCAC-CGA-GA     TGTTCCTGCGCGACA  47 330
CXD84_RS00890 NONE
CXD84_RS00895 NONE
CXD84_RS00900 NONE
CXD84_RS00905  174605 ..  174626 + -17.3   -4.7373   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG 100 48
CXD84_RS00915 NONE
CXD84_RS00920  176491 ..  176508 +  -6.3  -3.05844   ACAGGTCGTCGGCGA             TCAG-CGC CTC GCGGCTGA             TCTTGCGCTCGGGCG  49 219
CXD84_RS00930  178019 ..  178029 +  -6.8  -2.62735   TGGGCCGCCGGTTCC                 CAGG AGT CCTG                 TCATGTCCGCAATCT  47 104
CXD84_RS00935  178831 ..  178863 +  -2.6  -3.92324   TGGCGGCGCCGCGTC     CAGCCCC-C-GCGCCG TAG CGCCTTGGCGGGGCTG     TTTACTATTACGCCC  56 9
CXD84_RS00940  179752 ..  179796 +  -8.3  -3.92324   GGGTTCGGCCTTCTC GTCGGCGTGGCTGGCGGCCAG CAC CATGCCCTCGGACACGCCGAA TTTCATCTTGCGCGG  70 135
        apbC  183463 ..  183480 +  -3.3  -3.14125   TGGTGGTCCGGCCCG             CCTGACG CATG CGTCGGA              TATTGCGTGTCTGCC  44 21
CXD84_RS00960 NONE
CXD84_RS00965  189034 ..  189046 +  -7.7  -3.37344   GCGGCGGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  59 49
CXD84_RS00970  189825 ..  189846 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC CTC GTCGGGCTGC           TTCATGTAGCGGGAA  52 216
CXD84_RS00990  191661 ..  191689 +    -8  -5.24129   GTCCTACAATTCCCC        GAGGTCGGCCCG CTCGT CGGGCCGGTTGC        TTTTTTGTCACCAGC  95 76
CXD84_RS00995  194044 ..  194083 + -33.6  -3.65812   GCAGTAAATCCGACG  CGCCGCGCCGCGCCGCCC GAGG GGGCGGCCCGGCGCGGCG   TTGTCTTCGAGGGAG 100 34
CXD84_RS01000  195351 ..  195361 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS01010 NONE
CXD84_RS01015  198018 ..  198033 +    -6  -3.55444   AACAGGGGCGGATCG              GCGCCC ATCC GGACGC               TTTGCGGCATGGCGC  56 49
        gcvT  199511 ..  199534 +  -7.4  -3.97368   GGCTTCCGCGCGGCC          GTTGGC-CGCC GGA GGCGCGCAAAC          TTTCTCCATTCCCAC  68 47
        gcvH  199968 ..  199988 +  -8.1  -3.90744   CAACGGGCCGGCCCG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAAAAC  68 48
        gcvP  202888 ..  202933 +    -9  -3.75665   GTGCGCGCTCATGGC GCATGACGAGGTGCCTGTCCCC CCAT GGGGACTGGCACCT-G-CAAGA TTTCATGGCGTCTGC  68 44
CXD84_RS01040 NONE
CXD84_RS01045  206418 ..  206454 +  -6.6  -4.26019   CTTCGGCCTGTGCCT   GTGCGCCGACCTGGTG CTGGCCA CGCCAG--CGGCGCGC   TTTTGCCTGTCGTTC  70 411
CXD84_RS01055  207625 ..  207660 +  -3.2  -3.56568   GTGGCCACTTGTGCC    GCAATGCGC-CAGCAGG GAA CTTGCTACGCGCATCGG    TTTGGCAGATCATTG  49 54
CXD84_RS01060  208532 ..  208543 +  -7.2  -3.60098   GGGCTTGCCGTTCAT                GCCG ACCA CGGC                 TTTGGCGTAGCCGGT  60 481
CXD84_RS01095  213344 ..  213358 +  -4.2  -3.72893   CAGGGTGCGCGTCAG               GCCG ATCAGCC CGGC               TTTGGTCGCCGAATA  55 352
        queC  223899 ..  223912 +  -4.5  -2.82623   GCATCAGGACGGTGT               CGCGCC ATT GGC-CG               TGCTTGTAGCCCACC  44 126
CXD84_RS01135  225430 ..  225464 +  -8.4  -2.84298   CCTCCAGGCATCGCC     GCGCGACTGAGCCTGG CGC CCGGCCTGCGTTGCGC     TAGTTGTGAACTGTC  54 16
CXD84_RS01150 NONE
CXD84_RS01155  228812 ..  228833 + -18.7  -3.41051   ACGACTTTGCTGTGC           CGGGCGCCC CTTG GGGCGCCCG            TTGTCCTACCCGTAG  93 80
CXD84_RS01160  230398 ..  230420 +    -4  -4.18018   CCACCGCCTTTTCCT           GCATGCCCTG CTG CAGCGCGTCC           TTTTCGCTGACGCCC  63 123
CXD84_RS01170  233179 ..  233198 +  -5.6   -4.7497   GGCCGGCGCAACCGG            GACAGCCT TGCG GGGCTGCC             TTTTTCATGGATGGG  81 64
CXD84_RS01175  234283 ..  234293 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 76
CXD84_RS01180  235273 ..  235318 + -13.5  -3.14132   CAACCTGGACGAATA CAACCTATTGACAGTTCACAG CTAG CTGTGATGTCTCAATAGGTTG TTCATCCAGGCCGGA  72 1
CXD84_RS01185  236500 ..  236534 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS01205  239827 ..  239865 +  -7.3  -3.14229   AGGCGGCGCTCGAAG  GCGCCGACGGCGCCC-TGC AGG GCATGGGCCCGGGCG-CGC  TGTTCATCAACATGT  52 315
CXD84_RS01225  245004 ..  245022 + -11.6  -3.04144   ATCATCCATCCCACG             GCGCCGGC GGC GCCGGCCC             TGTTCGCGCTGGCCG  65 367
CXD84_RS01235  247025 ..  247072 + -10.4  -3.01712   AAGGCAATCTGCAGC CCTGACCAGGGGAGCCGCTGCCC TCA GCGCAGCGGCTCGA-TGGCCTGG TCTTCCAGCGCGGCC  60 21
CXD84_RS01260  251662 ..  251691 + -23.7  -3.18264   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 97
CXD84_RS01275  255295 ..  255324 + -23.7  -2.62616   CGACACCCGCGGCAA       GGGTGCCTGTCCC AGCC GGGACAGGCACCC        TGCTGTACGCCATCG 100 72
        fumC  258790 ..  258802 +  -4.7  -2.52464   GCGCGCCGCTAGAGC                GGCGC CGG GCGCG                TCAGTTGGGCGCGCC  42 29
CXD84_RS01300  260931 ..  260946 + -11.8   -5.4505   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC 100 54
         ggt  264116 ..  264135 +  -5.6  -4.36914   CGCCAGGAAGATCGG            CCCGGCGCC GGT GG-GCAGGG            TTTTATACGGCGCGA  69 414
CXD84_RS01330  267947 ..  267964 + -14.1  -3.84451   GTCGAACCAGGAAAA             CGCCGCC GTCA GGCGGCG              TTTGCGTTTGCGCAA  83 441
CXD84_RS01340 NONE
CXD84_RS01345 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC NONE
CXD84_RS01370 NONE
CXD84_RS01375 NONE
CXD84_RS01380  276864 ..  276890 +  -8.7  -2.84812   CCCAATCGGGCAGCA        CGCG-CACCAGG CCTG CCTGATGGCGCG         TGTCATGCTGTCGCT  54 157
CXD84_RS01390  278295 ..  278336 +  -7.9  -4.18488   CGGCCGGACACTGTG GGCAGTGCTTCGCGCGCAGC ATG GCTGCGCCAGGCGCA-TGTC TTTCTTGCCATCCGT  74 167
CXD84_RS01410 NONE
CXD84_RS01415  281227 ..  281239 +  -3.3  -3.34517   TGCATTGTAGTGAAA                CTTCG CGC CGCAG                TCTTTCGGACAGGCT  46 518
        mscL  287544 ..  287556 +  -6.2  -3.63569   CAGGCCCAGCACGCG                CGCC AGCTG GGCG                TTGTTGCCCCATTGC  57 479
CXD84_RS01465  289247 ..  289281 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS01495  295618 ..  295644 + -12.3  -2.58544   CAGCACCGCCAGCTC        GGCCGCGGCCAC GGCG GTG-CCGCGGTC         ATTGTGCGGGTGCAC  62 285
CXD84_RS01505  297261 ..  297304 +  -8.1  -3.33814   CGGCGCGGCGCGAGC CGCCGG-CCTGAGGCGCCGGCG GGG CGTCG-TGCC-CGGATCCGGCG TATTATCTAGCGTTT  56 15
CXD84_RS01510  299359 ..  299385 + -11.5  -2.74488   TGTCCTGATTCACAG        GCCCGCG-CGGC CAGC GCCGGCGCGCGC         TGATTCGCGTCGTTG  62 176
CXD84_RS01520  301900 ..  301919 +  -7.8  -3.35679   TGATGCCCAGCTCCA            GCCCGATC AGGT GATAGGGC             TTGTACATGGCCGAA  59 391
CXD84_RS01545  306443 ..  306474 + -10.1  -3.05384   TCCACCTTGAGCAGC      GGCAGCCGGCCCAC GTCCA GCGGGTC-GCTGCC      TTCGGTGCGCAGCAG  59 344
CXD84_RS01565 NONE
CXD84_RS01570 NONE
CXD84_RS01575 NONE
CXD84_RS01580 NONE
CXD84_RS01585  313451 ..  313478 +  -9.1  -4.07568   TCCCGAAGTCTTCCT        TC-CTGCGCCGG CCTGT CCGGCGCAGCGC        TTTTGGGGACGGCAC  75 56
CXD84_RS01600  318026 ..  318044 + -11.7  -3.59262   TGCCGCCGGTGGCGC             GCGGCGA GGCGA TCGCCGC             TTTCGCGCTGTCCGA  72 404
CXD84_RS01610 NONE
CXD84_RS01615 NONE
CXD84_RS01620  321671 ..  321689 +  -3.1   -3.4247   ATCTTGGCGTGCGTC            TG-GCGGG CGCG CTCGCTCA             TGTTGTTGACGTTCT  47 336
CXD84_RS01645 NONE
CXD84_RS01650 NONE
        ruvX NONE
CXD84_RS01660 NONE
CXD84_RS01665  329663 ..  329677 +  -2.7  -2.82516   CAGCCGCAGCGTGCA               CACGC CGTTC GCGGG               TATGATGCTGCCCGG  41 64
CXD84_RS01670  330483 ..  330519 + -16.4  -3.06831   TCGCCGGCGAGCTGT    AGCCGGCCCGGGCGGC GCGTG GCCGCCCGCGGCGGCG    TTCAGTCGCCGTTGG  79 24
CXD84_RS01690  334810 ..  334834 +   -15  -3.16492   TCATCCTCCGGTTGC         CGCCGCGCGGG CCGT CCCGC-CGGCG          TGTTGCTGGCTATCC  76 408
CXD84_RS01735 NONE
CXD84_RS01740 NONE
CXD84_RS01745  343952 ..  343974 +    -9  -2.71681   CGCGCAGCAGCCGGT           CGCCGGCGGC ATG GCCGTGGGTG           TCATTGACCGACTTG  52 361
CXD84_RS01770  347665 ..  347675 +  -2.4  -2.82519   CCAGCGTGTCGCACC                 AGCG CGC CGCC                 TGATTGATGTCATGC  39 190
CXD84_RS01815 NONE
CXD84_RS01820 NONE
CXD84_RS01825 NONE
CXD84_RS01830  358180 ..  358214 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS01850  362388 ..  362412 +  -7.8  -4.96388   CTGAAGCGGCGTCGC          GCCCGGGG TGCGGGTTT TCCCGGGC          TTTTATTTAGTGCTT  86 37
CXD84_RS01855 NONE
CXD84_RS01860 NONE
CXD84_RS01865  365242 ..  365258 +  -3.6  -2.62157   CAAGAAGTAGACGCA              CCCTGG AACGG CCATGG              CTTATCGCATTCATC  40 31
CXD84_RS01870  366309 ..  366336 + -15.6  -2.56596   TGCCCGGGGTGCCGG        GGTGCCTGTCCC AGCG GGGACAGGCACA         TGGATTCCTGCGGGG  74 69
CXD84_RS01875  367289 ..  367317 + -10.1  -4.11216   GCAACAAGCGGCGGG        GTTTGCCGGCGCG GCT CGCGGCGGCGCGC        TTTTCGGCATGCCGC  78 94
CXD84_RS01880  368567 ..  368601 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS01895  371154 ..  371183 +  -4.1  -4.29738   ACATAGTTGACGTAG       TTGCCGGCGCCGT GGCC GTGGCGCACGCAG        TTTTCGTGGATATCG  67 144
CXD84_RS01910  374531 ..  374560 +  -2.7   -4.8622   AGGAGCTCGTCCCCA       CGGGGACTGGCTCC CGA GGGATCAG-CCCAG       TTTTTCCTTCAGCAG  77 118
CXD84_RS01930  379186 ..  379214 +  -4.5  -3.35679   GGCGCGGCCCGCGAA       GCAGCTGCGGGC AGGCAG GCCCG-GGCTGA        TTATCCATGCAACGA  51 79
        mreC NONE
        mreD  380644 ..  380669 +  -3.9  -3.09492   GACGACGTCGAATCT         TCCG-CCGTCTG ATC CGGGCGGGCGCA         TGTTCGAATTCAAGA  45 14
        mrdA NONE
        rodA  384225 ..  384272 +  -4.6  -3.61715   CCCTGCGCATCGATC AGCGCGC-CGTCGGGGGCCGG CTCGCCC CTGGCCGCCAGCACGCGCGCC TTGTTGACCGCGATC  54 496
CXD84_RS01980  390348 ..  390386 + -11.9  -4.42788   TGGTGGCCCAGAACT  TCACCA-GCACGACCTTGC CGC GCA-GGTCCTGCATGGTGA  TTTTCTGGCCTTCGA  88 498
        rsmI NONE
CXD84_RS02010  394120 ..  394154 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS02020 NONE
CXD84_RS02025 NONE
CXD84_RS02030  397412 ..  397443 + -15.9  -4.25104   GGCTGAGCGCCGGCC      CGGGTGCCTGTCC CCGCGC GGACAGGCACCGG       TTTTCCTGCGGGGAC  95 35
        trxB  404187 ..  404197 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS02065  405478 ..  405499 +  -8.7  -3.18582   GCGCCACCAGGCCCA           CCGCCTGCGT ATC GCGCAG-CGG           TTGGTAGCTGAGCTG  56 269
CXD84_RS02125 NONE
CXD84_RS02130  418102 ..  418116 +  -2.7  -2.62184   TGACGCCAGGGAACT               GGCGG GCACG CCGCA               TGGTCTGAGCAGAAG  39 38
CXD84_RS02135  419515 ..  419525 +  -5.4  -3.37533   AGAAGAACGCGTGCA                 GGAA GCG TTCC                 TTGATGGTTTTGGGG  49 438
CXD84_RS02150  420919 ..  420974 +  -9.8  -3.13403   CCAGCACCAGCCAGA GGC-T--GCGCCGC-GCGTCGGCAAAGCG CGC CGCCTGGCCG-CGCAGCGGCGCGTACGCC TCTTCGTCGGCCGCC  60 53
CXD84_RS02165  424178 ..  424188 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 54
CXD84_RS02170  425317 ..  425354 + -10.6  -3.53224   GCCGGTCATGGAGCA  GCC--GGCCAGGCGC-ACG CGC CGTTGCGCCCGGCCACGGC  TTTCGCGCAGCGCTA  70 123
        gltS  426614 ..  426625 +  -4.4  -3.16881   GCCGTTCGTGGGAGG                CATG TGAC CATG                 TTCATCCGCTGGCTC  47 19
CXD84_RS02180  428558 ..  428572 +  -2.1  -3.14931   GATCACGATGCCCGC              GCC-TC CCTT GATGGC               TTCGTCCAGGCTGGC  43 455
CXD84_RS02210  434406 ..  434434 + -10.3  -2.57026   TCTGGATGGGGGAAA       GCGGCCGGC-CGG GCTTG CCGTGCCGGC-GC       ATTGGTGTCACTCTA  57 65
CXD84_RS02245  440870 ..  440914 +    -4  -2.87132   GGCGTGGCGCGGGGG CCGCCGGCGGATGACGCCGCG GCCG CGCGGCGGCAA-TACCTGCGA TGTATCGGCCGACCC  43 12
CXD84_RS02250 NONE
CXD84_RS02255 NONE
CXD84_RS02260  444207 ..  444252 +  -8.9  -3.32769   GACGAAGTTGGCGGT GGTCGGCGTGGCGTT-GTCGGG ATG CACGGCCAGGGCGATGCCGACC TTGATGGTTTCGGCC  59 105
CXD84_RS02270 NONE
CXD84_RS02275  447479 ..  447501 + -10.4  -4.69622   CCTAGCGTCGTCCGC           ACGCCGCGCC GCC GGCGCAGCGA           TTTTTCCCCTTGTCT  93 36
CXD84_RS02280  448935 ..  448950 +  -2.6  -4.08216   CAGGAAGCGCGACAC              CATGTAG TAG CT-CATG              TTTTCCACGCAATAC  58 233
CXD84_RS02310  454880 ..  454895 +    -6   -3.5774   TTACCGCTCAAAGCG              CCGCGG CGAA CAGCGG               TTTCCACGATTCGAT  56 63
CXD84_RS02340  464194 ..  464215 +  -5.7  -3.30771   CCCGCTCAGGACATC           GGTAAGCGC CGCG GCGCTGCCC            TTGTACGGAATGTGC  51 409
CXD84_RS02365  467652 ..  467681 +  -7.7  -3.14132   CTGCCTGAGCGCCGC       GAGCCGCTCGCCG CACA CGCCCAGCAGCTC        TTCGTACACCCCGGC  54 33
CXD84_RS02375 NONE
CXD84_RS02380  469926 ..  469965 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD84_RS02390  471068 ..  471088 +  -3.1  -2.77192   CAGCACCGAGCCATA            GAGCAGCGG CTG CTGCAGATC            GTTCTTGCCGGCCTT  39 97
CXD84_RS02415  478063 ..  478089 + -23.8  -4.79223   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 34
CXD84_RS02460 NONE
CXD84_RS02465  489623 ..  489660 +  -8.3  -3.28924   CCATGTCCAGCGAGG   CGTCGTCGGGTACCTGG CCGG CCAGGTAGGCCACGCCG    TTGTAGACAGCCATG  59 441
CXD84_RS02480 NONE
CXD84_RS02485  492273 ..  492316 +  -3.1  -4.58685   GGTCGAAAACTACTG GTAATCCCCCCTATGGCAGGG GGAA TCC-GCCATGAGGGGG-TCGC TTTTTCACAACATTT  71 22
        phaZ  493671 ..  493686 + -11.8   -4.2687   GCGCGCTCCCTGCAA              CGGGCC GCCT GGCCCG               TTTCTGCTTTTTACG  91 48
        rsxB NONE
         nth  495060 ..  495074 +  -3.4  -3.88985   ACATCGTGGGAAACA               CCGTGG AAA CCCTGG               TTTCTGAAGCGTTTT  56 108
CXD84_RS02505 NONE
CXD84_RS02510 NONE
CXD84_RS02515  498003 ..  498013 +  -8.2  -2.52516   AACCTCCTGAAGGAA                 GCCG ACA CGGC                 CTTGCTCATCCGGCA  51 39
CXD84_RS02520 NONE
CXD84_RS02525 NONE
CXD84_RS02530 NONE
CXD84_RS02535  501918 ..  501952 + -30.1  -3.09516   GCTGACCCGCGCGCA     CGCTGGCGGCGCGGC GCCAG GCCGCGCCGCCAGCG     TTCAGTCCTGGGCGC 100 36
        msrB NONE
CXD84_RS02575 NONE
CXD84_RS02580 NONE
CXD84_RS02585  510362 ..  510391 + -19.5  -4.13767   AGCCATCGCCATCAA       CAAAATTGCCCGC TTTC GCGGGCAATTTTG        TTTTCGGCTGCCGGG 100 47
        lplT  518971 ..  518999 +  -6.5  -3.74747   CAGCAGGGCAATCTG        GCGCCGCAGGTAG GGA CTGCAGGCGGCGA        TTTCCTCGGGCTTGG  61 278
        ompR NONE
CXD84_RS02625 NONE
CXD84_RS02630  523174 ..  523184 +  -4.6  -3.10677   TAGCGTAGAATTTAG                 GGCT TGA GGCC                 TTGCCTGCCTTAATT  47 38
CXD84_RS02635  523781 ..  523797 + -10.8  -3.95584   GCTGTAATTTCCCCG              GCCCGG CTCGT CCGGGC              TTTCATTGCTCCAGA  79 34
CXD84_RS02640  524361 ..  524413 + -15.5  -2.79188   AGCGCCCCCCGCGGT GCGCCGGCCTCCCCCGCCGGCGGCCG CAGC CGGCC-CCTGCGCGGG-G-CCGGCAC TCATTCCCTTCCCTC  75 40
CXD84_RS02650  527057 ..  527073 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD84_RS02670 NONE
CXD84_RS02675  530799 ..  530825 +  -8.7  -3.53012   ATCCAGCTCGAATAG        GCGCGCCCGC CCCGGCCT GCG-GCGCGC         TTTGGCGCACCGCAG  62 26
CXD84_RS02680  531870 ..  531906 +   -16   -4.2558   GGCGCCTGCCCATTG   CGCGCCAA-TCCCGC CCAATCAA GCGGGAATTGGCGCG    TTTTCCTGGACAATC  95 41
CXD84_RS02685  532785 ..  532795 +  -2.4  -3.01497   AGTAAGGCGGCCGGA                 GCGG GAA CGGC                 TATGCTTTCGGCTGC  41 84
CXD84_RS02690  534197 ..  534229 +  -3.2  -4.72272   CGGCCGGCGCACGCC     GCCGGCGCGCGCCGG CCCT CCGGTTC-CGCCCCC      TTTTTCGTGGAGAAC  75 476
CXD84_RS02700 NONE
        argF  536512 ..  536534 +  -6.3  -2.58714   AAGCGCTAAAATGCC           CCGTTAGAC TTCTT GTTTGACGG           TCCGTTGCTGTCAAA  46 112
        argG  537929 ..  537958 + -23.7  -4.08394   GCGGCAACCGCGCGA       GGGTGCCTGTCCC TGCC GGGACAGGCACCC        TTTTGCCGCAGGTGT 100 41
CXD84_RS02775  550982 ..  551018 + -20.4  -3.34398   ATGGCCTGCCTTCAT   GAAAGCCCCGGTCAATC GCAT GATTG-CCGGGGCTTTC    TCTTTGCCGCGCCGC 100 60
CXD84_RS02785  551932 ..  551954 + -12.7  -5.63517   TGATGTGCCCAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGCC 100 65
CXD84_RS02795 NONE
CXD84_RS02800  554897 ..  554907 +  -4.6  -2.92371   CCAGCCAGCCGTAAA                 CCGG CAT CTGG                 TATGGTTGCCTCCAT  44 53
CXD84_RS02805  556641 ..  556651 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS02810  557874 ..  557906 +  -3.2  -3.05844   CCATGTTGCTCGACC      CGACCGTGGACCAC ACGCC GTCGACCACCGCCG      TCTTGGCGTGCAACA  43 244
        egtD  561329 ..  561343 +    -7  -2.71011   GCGCCCGCCACCCAC               GTCCGC AGC GCGGCC               TGCTTACCCGCCCGT  48 366
CXD84_RS02835  562510 ..  562541 + -20.4  -4.37886   CCAGAGAATTCAAAA      CAAAATGCCCGCAA TCGC TTGCGGGCATTTTG       TTTTGTGCGCGATGA 100 38
CXD84_RS02850  563992 ..  564032 +  -5.8  -3.58536   AGGCTGCGCCAGTCT  ACCGCCGCGGCCGGCGCG CCATT CGCGGGGACTGAGGCGGC  TTTGGCCGTCAATTT  57 309
CXD84_RS02860  564746 ..  564801 + -13.9  -4.11216   CCAGTCTTGCCTATT GATGCCCTGCGCG-CCCTATCGTGGA CATAT TCGGCGCCAGGGCCGCGCAGGGCGAC TTTTAACCGTAACGG  85 77
CXD84_RS02865  566287 ..  566297 +  -8.2  -3.14132   GTCCGGCCAGCACTA                 GCGC GGC GCGC                 TTCGTCAGCGGCCGG  56 25
CXD84_RS02890  571132 ..  571151 +  -8.6  -3.68222   TGCCTATATGCATAT            TGTGAAGC GCGT GCTTCGCA             TTATTCAGATTCGCA  65 139
CXD84_RS02895  571467 ..  571488 +  -3.6  -3.86015   ATCCCGGCGGTCCGG           CGGCC-GCC ATCCG GGCTGGCCC           TTTATCCGCCCAATA  57 65
CXD84_RS02900  572631 ..  572645 +  -2.7  -2.69151   TTCCTGCCAGGAGTG               CGGCG ATGAG CCCCG               TAGTATCTGAAGCCA  40 82
CXD84_RS02905 NONE
CXD84_RS02910 NONE
CXD84_RS02915 NONE
CXD84_RS02920  576514 ..  576529 +  -7.5  -2.87132   CCGGTCTCGCCGCCC              CGGCG GCAAGG CGCCG               TATCTGCGAGGGGGG  52 139
CXD84_RS02925 NONE
        groL  578759 ..  578782 + -19.6  -4.86621   CTTCCCAAAAAAAAA          CCCCGCCAGG TTCG CCTGGCGGGG           TTTTTCATTGGAGCT 100 87
CXD84_RS02940 NONE
CXD84_RS02945  583514 ..  583527 +  -9.5  -3.53012   TCGTCCTGGACTGAG               CGGCG GCGC CGCCG                TTTCCAAGCGCGCCG  64 27
CXD84_RS02950 NONE
        pyrF  585716 ..  585751 + -20.4  -2.59748   TAAGAACGTAACCCC    CCGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCGC     TGACTTCTCAGGGTG  95 30
CXD84_RS02990 NONE
CXD84_RS02995 NONE
        phnD  593357 ..  593394 + -11.3  -3.02511   GGCCCGCGTGCGCGG   CCA-GTCGCTGCGCCG CGCGCGC CGGCGCATCGGCATGG   TGTTCCAGGAGTACA  62 261
CXD84_RS03010  594540 ..  594571 +  -6.7  -3.78329   TCAATACCTGGATGC      GGCGC-TTCGAT CCGGCCGAC ATCGAACGCGCC      TTTCAATTGCTCGAC  64 101
        phnE NONE
        phnE  596788 ..  596808 +  -3.9  -3.59979   TCAATTTCCGGGTTA            GCTTTGGGT ACT ATCCTAGGC            TTTCGGCTCGGCGGG  51 165
CXD84_RS03030 NONE
CXD84_RS03035  598666 ..  598684 +  -2.2  -3.53091   CCGGTGAGGGTGATG             GCGGCGTC GAA GGCGCGGA             TTTGCGCCAGCGCGT  47 262
        rsmD NONE
CXD84_RS03050 NONE
CXD84_RS03055  601145 ..  601169 + -15.7   -3.9941   CCTCCCCCCCTCGCG          GCGCGCCGG CCTGTCA CCGGCGCGC          TTTCGTTGTCGGCCA  91 59
        benE  602328 ..  602354 + -12.2  -3.57144   GGCCTACGACGGCCA         GCGCACCTCGGC CAT GTCGGGGTGCAC         TTTCAGGATCCGGCA  74 45
CXD84_RS03075 NONE
CXD84_RS03080  606512 ..  606528 + -13.7  -4.72272   CGCCTCAGAAAAAAA              GCCCTCC GCT GGAGGGC              TTTTTCGTGGGCCGC 100 49
CXD84_RS03090  608881 ..  608923 +  -3.3  -3.66874   TCGCCGTCGGTCAGC CTGAGCACGCGCGCGCGC GCCTGATA GCGC-CGCGCATAGTCGG TTTCGATGCGGTTGA  51 504
CXD84_RS03125  619139 ..  619153 +    -7  -3.41636   CGCCGACGTTCCGGG               CGCGCC CTC GTCGCG               TTCCTTGCCTTGCTT  56 172
CXD84_RS03130 NONE
CXD84_RS03135  621228 ..  621271 + -10.9  -2.57344   ATCAACCTCAACTGA CGGCA-GCCCG-GCGGGCGGC CCCG GCCGCCCCCACTGCCGTGCCG ATTGTCGCAAGACTG  59 26
CXD84_RS03140 NONE
CXD84_RS03145  623830 ..  623840 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 110
CXD84_RS03150  625023 ..  625036 +  -3.7  -2.71791   CAGGCCCTTCCTGCA               GCGGG CCGG CCGGC                GTTTCAACAAGACCT  41 204
CXD84_RS03160  625309 ..  625337 +  -3.8  -5.55769   CCAAACACCAAAAAG       GGAAGC-TAGCGG TTAC CTGCCGTGCTTCC        TTTTTTCTTGTAGCC  95 38
CXD84_RS03165  625441 ..  625460 +  -6.3  -3.94877   CTCCAAACACTTCAA            GGCCCGC CGCGTC GCGAGCC             TTCTTGTTCCAGGAT  64 35
CXD84_RS03170  625926 ..  625945 +  -7.1  -3.14468   CGTGATCCGGCCGTA            GCGCG-GC CCGGC GCGCGCGC            TTGCCTATAATGGCG  52 25
CXD84_RS03175 NONE
CXD84_RS03185 NONE
CXD84_RS03190  628635 ..  628647 +  -4.7  -3.54424   ACTGCCCTGGCTGGC                CGCCG ACA CGCCG                TTTCCCCCGGTCGAA  52 50
CXD84_RS03200  630145 ..  630182 +  -3.2  -3.00923   GCCGCCCTGAGCACG   CGCGGGGCGGCAAAGT CGATCT ACAATTCCGCCCCATG    TCTATCCTCTTCCAC  42 31
CXD84_RS03205  631253 ..  631265 +  -6.2  -4.74103   CCCGAGCGGGCATGG                GCCC CAAGA GGGC                TTTTTGCCTTGGGCA  82 49
CXD84_RS03215  633361 ..  633396 +  -8.8  -3.54424   GCGCATCGCGCGGCC    CGGCCGGCCGATCGGGC GAG GCCTGCGCGCCCG-CCG    TTTCGCGGAATGCGA  62 67
CXD84_RS03245  642234 ..  642251 + -10.5  -3.21218   TGCCAGTTGGCGCTT             GGGCGCG TTGC TGCGCCC              TTCCTGCTCGGGCGT  60 82
CXD84_RS03265 NONE
CXD84_RS03270 NONE
CXD84_RS03275  646721 ..  646733 +  -2.6  -3.07816   CGTCTCCACTAAGGG                CGGG TGGAT CTCG                TTGGCTGCCTCCAGA  41 29
CXD84_RS03280  648122 ..  648140 +  -6.7  -3.77832   TGTTGCGGCGCGCAT            C-CACCGG GTGG CCGGTGCG             TTCTTCGCTTTGCGC  61 313
        galU  650637 ..  650655 +  -4.4  -2.71924   GCGCTCGGTAAAGGC             GATGACCG CGC CGGCCACC             ATTTGCGGCGCCATG  40 299
CXD84_RS03310  654820 ..  654846 +  -9.5  -2.62184   CAGGCGCGCGCGCCG        GCTG-GCT-CGGC GGC GCCGAAGCGCAGC        TGCTGTACCGCCGGG  55 143
CXD84_RS03325  658717 ..  658731 +  -2.8  -4.09685   CGGAAAAGCGGCGCG               TGCC GGACAGG GGCA               TTTTAGGGGCTGGCG  59 521
CXD84_RS03335 NONE
        dusB NONE
CXD84_RS03345 NONE
        purH NONE
        ruvC NONE
        ruvA  664250 ..  664298 + -10.8  -3.30124   CGCGACCGCCTCCAG CGCGGCGGGCGGCGC-G-GCCAAC CCC GAGGGCGCGGCGCCGCTGGCCACG TTGTCGCGCGTGAGC  66 83
        ruvB  667607 ..  667641 + -14.9  -4.84359   GGTCGATGGGGTCGG    GCCGCGC-GCGGGCGC CCGC GCGCGAGCTGCGCGGC     TTTTTCTCGGCCTCG 100 272
CXD84_RS03390 NONE
CXD84_RS03395  671731 ..  671766 +  -9.1  -3.03124   AACGCATCGTAGTCC   TGCATCCAGGCGCGC CATTGCGC GCGCGCCTGG--GCA    TGTTCACGCATGGCC  55 336
CXD84_RS03410 NONE
CXD84_RS03415 NONE
CXD84_RS03420 NONE
CXD84_RS03425  676789 ..  676832 +   -21  -3.53091   CTACAAGATAGACTG ATCCCCGGGTGCCTGTCCCC GCAG GGGGACAGGCACCCGCTGAC TTTGCCCGCCAGGCT 100 25
CXD84_RS03430 NONE
CXD84_RS03435  679384 ..  679397 +  -2.4  -4.10144   CCTTGATAAAGCGCG               CGAT GCGCGG ATCG                TTCTTGTTGTCTTCA  58 151
CXD84_RS03445  681368 ..  681378 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS03450  682869 ..  682895 +  -5.9  -4.14243   TAGAGTGGGGTCTCT        GCAACACGTGCC CCAG GGCAC-TGTTGG         TTTTGCGCTGGAGTG  66 512
CXD84_RS03480  686661 ..  686674 +  -5.9  -6.06723   CACAGGATTGATCAA               CCGCT TTCG GGCGG                TTTTTTTTTCGCCCC 100 468
CXD84_RS03485 NONE
CXD84_RS03490 NONE
CXD84_RS03495  690053 ..  690087 +  -2.6  -2.74012   TCGGCACGCCATCGA     CCTGGTGCGCTACAGC AAC GGGGTGGTGCGCCGGA     TCATTGCGCTGCTGA  38 50
CXD84_RS03500 NONE
CXD84_RS03505  691412 ..  691436 + -15.7  -4.67038   CCTTCTTCTTTCTAA          GCCCTGCTGGC CGA GCCAGTGGGGC          TTTTGCTTTTGGGGC 100 77
CXD84_RS03510  692246 ..  692264 +  -3.9  -3.28924   GGCCGGCTTCGAAGG            CGACTTCC TCCA GGAA-TCG             TTCTACCAAGCCATC  47 186
CXD84_RS03530 NONE
CXD84_RS03535  695457 ..  695474 + -10.5  -3.65351   GCCGATTGACGGTTG             CCCCTGC TCAC GCGGGGG              TTTCCGTCAGCCTGC  70 43
CXD84_RS03540 NONE
CXD84_RS03545 NONE
CXD84_RS03550 NONE
CXD84_RS03555 NONE
CXD84_RS03560 NONE
CXD84_RS03565  697947 ..  697960 +  -9.5  -5.46657   GGGCGCAACTGGAAC               CCGCC ACAT GGCGG                TTTTTTATTGCCCTC 100 69
CXD84_RS03570 NONE
CXD84_RS03575 NONE
CXD84_RS03580 NONE
CXD84_RS03585 NONE
CXD84_RS03590  702338 ..  702358 +  -3.1  -5.32944   ATGAGTAATCCCGAA            CGCCGGGAT CTC GTCGCGGCA            TTTTTTCATTATCCG  89 33
CXD84_RS03595 NONE
CXD84_RS03600 NONE
CXD84_RS03605 NONE
CXD84_RS03610 NONE
CXD84_RS03615  707870 ..  707882 +  -6.2  -5.80817   CCAATGAATGAACGG                GCCC ATAGG GGGC                TTTTTTTGTGTTGAG 100 30
CXD84_RS03620 NONE
CXD84_RS03625 NONE
CXD84_RS03630 NONE
CXD84_RS03635 NONE
CXD84_RS03640  710653 ..  710673 +  -9.7  -3.54741   GAACAGCACGCGGTC            GCCAGCC TGAAAGC GGCTGGC            TTTCACCAGCTGCTC  64 405
CXD84_RS03655  711304 ..  711314 +  -8.2  -2.78216   GCACGTCGACCATGC                 CGCC CAG GGCG                 TCGTTCGTGACGATG  52 235
CXD84_RS03680  715186 ..  715204 +    -3  -2.65264   GGCGGGCGCCAGCCC             GCCCCG GCAGCCA CAGGGC             TCCTATCGATCGTGA  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB  719119 ..  719138 +  -2.8  -2.54325   CAACGTGGGGCCCTT            TTACCCGT TAAC ACGTGTGA             CTCTCTTTGCAAAGG  39 15
         pal  719689 ..  719718 + -21.5  -4.54727   AGCAGCCCCACCACG       CGTCGGGACGGTC ATCC GGCCGTCCCGACG        TTTTCGTTTCAGACC 100 56
        ybgF NONE
CXD84_RS03720 NONE
CXD84_RS03725  722369 ..  722396 + -10.5  -4.15453   ATAGGATGAGCACCT        CGC-CCGCCGCC AGCCC GGCCGCGGCGCG        TTTTCCGCTGACTTC  78 120
CXD84_RS03730 NONE
CXD84_RS03735  723766 ..  723777 +  -2.2  -3.21099   CCGGCCCTGCACTAC                GCGCG CCA CG-GC                TTCCTGGTCACGCCC  42 465
CXD84_RS03745  724774 ..  724787 +  -5.9  -2.87931   ACCGTCAGCCGCGTC               CTGGC CCGC GCCGG                TCTGTCGCACCTGGC  48 330
CXD84_RS03760  729044 ..  729058 +  -4.2  -3.64703   TGCGCGACATGATCA               GCGG CGTGTGC CCGC               TTTCGGTCAGCGCGA  51 297
CXD84_RS03770  731542 ..  731554 +  -9.1  -2.52464   GCCGCCAGCAAGGCG                TCGGC CAG GCCGA                TGAATTGCGCCACGC  51 100
CXD84_RS03790 NONE
CXD84_RS03795  738223 ..  738239 +  -2.2  -3.53012   CAAGGAGGCTGCAAC              GCGGTA TCCTC TACCAC              TTTGGCCCGAAGACA  48 94
CXD84_RS03800  739362 ..  739381 + -16.4  -3.15147   TCCGCCAGCCGGCAT            GGGCGGCG GACG CGCCGCCC             TGTCTATTGCTTGAC  81 388
CXD84_RS03825  742856 ..  742870 +  -3.4  -4.07687   CGCGCTTGGCGTCGG               CCTCGG AAA CCGGCG               TTTTCGCCGCCCGGT  60 247
CXD84_RS03860  752098 ..  752112 +  -2.1  -3.84406   CGCTCGCGCAGCGAC               GATTG CGGGC CGATC               TTCTTCTGGTAGGCG  56 430
        nspC  755023 ..  755042 +  -4.2  -3.18366   AGGATTACGTAGACA            GCCTG-TCC TGA GGAACTGGC            TCTGTTGATTGAAGC  45 15
CXD84_RS03880  756426 ..  756436 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 119
CXD84_RS03885  757545 ..  757571 + -10.1  -3.06133   TGCCGGCAGCGCAAC         GCTGTGGCCGT TTCGT ACGGCTACCGC         TTCAATCGAACATTC  60 130
CXD84_RS03890  758252 ..  758295 +  -2.8  -3.91897   GCATCACCATCGAGG CGGTCGCGGAAGCGGCGCGC TGAC GCCGGCCGCGTTCCCTACCA TTTGTACGTGACCCG  58 3
CXD84_RS03905  762950 ..  762966 +  -5.1  -3.78034   CCCGGTGACCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD84_RS03925 NONE
CXD84_RS03930  767631 ..  767659 +  -7.9  -3.07113   GGCCACGGCGGCAGC        GCGCGCGGCGGCG CTT CGCCACTGCCCGG        TTCCATCAGGTAGTA  52 295
CXD84_RS03940  769253 ..  769287 +  -8.5  -3.06183   TCGGCCAGCCATTGC     TTGCGCGCCGACC ATACCGGCA GGACCGCGCGCAA     TTCCGTGCCGATGCA  55 501
CXD84_RS03965  773687 ..  773707 +  -8.2  -3.12999   GCCGGGTATGAGTGT            GCGAGCCG CCGGC CGGCTCCC            TTACCTGTCGGATAC  56 101
CXD84_RS03970 NONE
CXD84_RS03975  774897 ..  774922 + -13.3  -5.15969   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG 100 108
CXD84_RS03985 NONE
CXD84_RS03990 NONE
CXD84_RS03995  781519 ..  781553 + -13.5  -2.99947   CATTGGGCGCCGCAC    GCCTGGCATCGGCGGC GCCG GCCGGCGAGGCC-GGC     TATCTGTGAAGATTC  70 152
CXD84_RS04005 NONE
CXD84_RS04010  785081 ..  785096 +  -7.5  -3.14211   GGTGCCCCGGCCTCG              CGGCG CGTATC CGCCG               TTGCTCGCGCGCAGT  54 62
CXD84_RS04020  786045 ..  786066 +  -2.1  -3.07291   CTGAGCGCTACACAC           CGGTTGCGT CGGT GCGAATCCG            TTCAATCGACTACTT  41 161
CXD84_RS04025  791231 ..  791259 +   -11  -3.31779   AAGCGCCGTGAATCA       CGGC-CCGCC-TGC CTC GCGCGGCGGCGCCG       TCTCTTTGCGTTCTT  66 40
CXD84_RS04030 NONE
CXD84_RS04035 NONE
CXD84_RS04040  796179 ..  796203 +  -2.7  -3.59979   CGCCTAAGGAGTAAC          CCTGCAAATCG CCG CGTTATGCAGA          TTTCGCATAACCGGC  49 27
CXD84_RS04045 NONE
CXD84_RS04050  798259 ..  798275 +  -6.5  -3.54424   ATATCAATGGAACTG              GGGCG TGCTGTT CGCCC              TTTCCCCGGATGGCG  56 129
CXD84_RS04060 NONE
CXD84_RS04065  800452 ..  800468 +  -7.9    -3.273   CCGTTATCCAATACT              CAGGCGG TAG CCGCATG              TCTTCCCTTTTCTAC  56 41
CXD84_RS04070  801798 ..  801811 +  -2.3  -3.44848   CGCTGTTGACGTAGA               AGACG TGGA CGTCC                TGTTTGGTGAAGCCC  47 497
CXD84_RS04095  806429 ..  806448 +   -15  -3.14564   CCGGCGAGCAAGCCC            CAGGCGGC GCCG GCCGCCTG             TTGCTCCCGCCATGG  76 151
CXD84_RS04100  807799 ..  807817 + -10.2  -3.04461   GTCGCCGGCGCGCAG             CGCGGCGA GGA TCGCGGCG             TGTTCGGCCTGGGTC  59 182
        pepN  823507 ..  823519 +  -3.3  -2.74192   AAAGCCTTGGATCTG                GCTGC TTA GGAGC                TACTCTTGAAACGTA  40 17
CXD84_RS04170  824710 ..  824744 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS04195 NONE
        serB  831245 ..  831267 +  -6.1  -3.16039   TCGCGACGGCCTCCC           GCCGCCCGG CCGGC CCGCGCGCC           TTACTCCGGCTGCTT  51 131
CXD84_RS04210 NONE
CXD84_RS04215 NONE
CXD84_RS04220  836410 ..  836426 +    -3  -4.11484   CATCGATTGCGGCTC             CAGCACC AGCC GGT-CTG              TTTTCAGCACTTGCC  61 509
CXD84_RS04320 NONE
CXD84_RS04325 NONE
CXD84_RS04330 NONE
CXD84_RS04335 NONE
CXD84_RS04340  860625 ..  860641 +  -2.1  -3.05384   GCTCATGCTCGCGCG              TTGACGC GCA GCGCCCA              TTCGGTGACGGCCAC  41 22
CXD84_RS04375  867898 ..  867931 +  -6.9  -3.09516   GGTAATCTCGCTTTG     ACTAATTATCCAAGA ATAT TCTTTGATAATTAGG      TTGCGTCATGAAAAG  52 108
CXD84_RS04380 NONE
        mexI NONE
CXD84_RS04390 NONE
CXD84_RS04395  874561 ..  874571 +  -3.2  -3.28712   GCGTATCGCCGGCCT                 TCAG GTA CTGG                 TTGTCCAGGCCCGCG  47 239
CXD84_RS04410 NONE
CXD84_RS04415 NONE
CXD84_RS04420 NONE
CXD84_RS04425  882502 ..  882553 + -12.9  -2.53876   CGATCGCCTCGGTCA GGAACTGCGGCGCGTCGCCGCGCA GCCGG TCCGCGCCCA-GCGCCGCGGTGCC TCCCTTCAGGTAGGC  62 232
        lrhA NONE
CXD84_RS04455  890031 ..  890049 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 303
CXD84_RS04490  899023 ..  899060 +   -12  -3.05816   ACTGGGTAGCCTGCC   GCAGCGACGCGAAC-GC GTGCA GCTGTTCGAGGCGCTGC   TTCCATGAGCGCTCC  66 470
CXD84_RS04520  904535 ..  904545 +  -4.6  -4.07568   GGGTGCACCATCAAA                 CGGC ACC GCTG                 TTTTCCCCAGGCCCG  62 31
CXD84_RS04525  905609 ..  905648 +  -2.8  -3.90291   TCGACCACGGTCTTC  TCGATTTCCAGCAGGACCA CGA TGG-CATGCTCGATATCGC  TTTCGTTGACCAGCT  56 434
CXD84_RS04535  907732 ..  907742 +  -4.6  -3.36327   CGGCCGCCTCGACAT                 TGCG CGC CGCG                 TTGTAGATGCGCTGG  49 255
CXD84_RS04560  912174 ..  912188 +  -2.1  -2.50816   AGCCCCAGCGGCCGA              GG-TCC TGCA GGATCC               ATTCGTAGATGACCA  37 520
CXD84_RS04590  918537 ..  918548 +  -7.2  -2.52623   TGCGTGGCCCCGGGC                CGCC CGTA GGCG                 ATGTTCTCGGCCAGC  48 497
CXD84_RS04600  920953 ..  920969 + -11.5  -2.77013   GAACGCCTGGGCTGA              GCGCGGC GAT GCTGCGC              CTTGTTACCGACATC  62 26
CXD84_RS04605 NONE
CXD84_RS04610  921460 ..  921479 +  -4.2  -4.00042   GACTACCCCGATACC            GGCCGT-TG AAC CGCGCGGCC            TTATTTGCTGCGCAC  59 17
CXD84_RS04620  923498 ..  923512 +  -7.1  -2.70932   AAGGTCAGCGTGCTG               CCGCT GTCGA AGCGG               TAGTTCAGCGCCGGC  49 365
CXD84_RS04635  926393 ..  926421 + -16.9  -5.53288   CGGCCAGACCGGAAA        TCCCATGCAGATC ACT GATTTGCATGGGA        TTTTTTTCGCTTCGG 100 59
CXD84_RS04645 NONE
        accB NONE
CXD84_RS04655  933082 ..  933102 +  -3.9  -2.93853   AACACATTTCGTTCA            CGCGACC CTGAACC GGTCCCG            GTTTCGTTGCCACGG  43 15
CXD84_RS04660 NONE
CXD84_RS04665 NONE
CXD84_RS04670 NONE
CXD84_RS04675 NONE
        accC NONE
CXD84_RS04690 NONE
CXD84_RS04695  940157 ..  940175 +  -6.7  -4.11216   CACCCGCCGACGTCG            CGCGTTGC AGCC GCA-CGCG             TTTTGCAAGTAACGG  67 137
CXD84_RS04700  940497 ..  940512 +  -3.2  -3.10775   GTTATCGTCGCGGTT              GCGC CACCTGGA GCGC               CTTTTGCATGCGCGT  44 105
CXD84_RS04705  941723 ..  941735 +  -6.3  -2.88544   CGAAATCCTTTACAA                TTTGG CTA CCAAA                TGTGTAGGAGTGGAC  48 93
CXD84_RS04710  941979 ..  942000 + -17.3  -3.84451   TTGAGGGGCGCGCGA           CGGGCAGCC GGCA GGCTGCCCG            TTTGCATTTCGCCCG  95 37
CXD84_RS04715  942460 ..  942470 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 73
CXD84_RS04720  943531 ..  943567 + -15.7  -3.14132   CATGCCACCGGCATC    CGGCCGCTCGTCGACCT GCA AGGCCGTCAGGCGGCCG    TTCCTGCACGGGCCG  77 82
CXD84_RS04735 NONE
CXD84_RS04740  947705 ..  947717 +  -9.1  -3.17075   GGCCTATGCGCCGCA                TCCGG TGG CCGGA                TTCGCTTAGCCGCCG  59 4
CXD84_RS04755  950241 ..  950274 +  -5.8  -3.62046   CTGCCCGGGCTGCTG     CACGCGCGCGGGCG CGCCGT CGCTGGGGCGCATG      TTGTTCAGGAAGTCG  57 255
CXD84_RS04780  956918 ..  956928 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS04785  958012 ..  958022 +  -5.4  -4.09243   GAGAATATGTTTTCT                 TCTC GTC GAGA                 TTTTCCGCGCCTATG  64 105
CXD84_RS04790  958648 ..  958665 +  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 54
CXD84_RS04800 NONE
CXD84_RS04805 NONE
CXD84_RS04810  963822 ..  963856 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 219
         ggt NONE
CXD84_RS04850  972385 ..  972443 + -21.6  -4.65895   GGTGGGGGCGGCGGG CCGCCGCAGCGGCGGCCG-GCTGCCGCG ATCGG CGCGGC-GCGCGGGCGCCGCCGCGCCCG TTTTTCGGTGGCGAC 100 45
CXD84_RS04855  973723 ..  973770 + -11.9  -2.62184   CCCTGGCGGTGGGGG TGCCGTTCGGACTGGCCGCCGG CTATT TCGGCGGCTGGACCGA-CAGCG TCATCTCGCGCGCCA  61 344
CXD84_RS04880 NONE
CXD84_RS04885  978449 ..  978464 +  -2.4  -4.10657   CAGCACCAGGGCCTT              GTCGGG GATA CCCAGC               TTTTCGAGGATATCG  61 414
CXD84_RS04895  980099 ..  980134 +   -11  -3.97636   GCCCACGCCGACAAG    CAGGC-GCGCCGCAAGG CGG CCTGACGGCGCCGCCGG    TTTCTCCATTCCAGT  79 2
CXD84_RS04900 NONE
        paaI NONE
        paaJ  982134 ..  982152 +  -5.9  -3.37796   GGCGTTCGCGGTGGG             CAGCGGC ATCAC GCCGGTG             TTCTCGCTGGTGAAG  55 405
CXD84_RS04925 NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF  988283 ..  988314 + -18.8  -3.55444   GGCGGGTTCGCAGGG      C-GCAACGCCGGCCG CCA TGGCCGGCGTTGCCG      TTTCAGGGGTAGACG  95 45
CXD84_RS04955  990355 ..  990389 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS04985  998765 ..  998786 + -14.5  -5.55769   TGCGCTCCCTACGAA           CGGCCTTTC GCGA GAAAGGCCG            TTTTTTATTGTCCCG 100 50
CXD84_RS04990 1006808 .. 1006842 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS05020 NONE
CXD84_RS05025 1012425 .. 1012448 +    -8  -3.27475   CCAGCACGTACCGGT          GCCCGTGCAG GTTG CGGCACTGGC           TGTTGTGGTCGGGGA  55 406
CXD84_RS05040 1013676 .. 1013713 +  -6.8  -3.53012   AACCAAGCGCCTGCG   CGGCAGGGTGCGCGAT GACTGA AGCGCGCGCCGGGCTG    TTTGCCCGCCGGCGC  58 4
CXD84_RS05045 NONE
CXD84_RS05050 1015164 .. 1015175 +  -7.2  -3.72576   CGCACACCGCGTAGC                CGCG CTCG CGCG                 TTTCCTGCAGCAGCA  64 326
CXD84_RS05060 NONE
CXD84_RS05065 1018267 .. 1018308 + -15.7  -2.52234   GCACGGCGCCGCCCA GCGCAATGCTGCCGGCGGC CAGC GCCGCCGCCATCCATGCGC  GTTCATGACGTTTGT  69 493
CXD84_RS05085 NONE
CXD84_RS05090 NONE
CXD84_RS05095 1023927 .. 1023980 +  -5.2  -3.86897   GCCGTTCTGGTCACG GGCGCGCTGTGGCCCTGTCGT-CCAT CGCC ATGCTGCGCCAGGCCCACGCCG-GCC TTTATGCCGCGTGCC  60 390
CXD84_RS05100 1024452 .. 1024503 +  -2.2  -4.59773   TCAGCCGCCAATACG GCGCGACAGCT-CGCGGGCGG-CCT CGACC AGGACCGGC-GCGTAGCCGTCCAGC TTTTTCAGCGTCACC  70 48
CXD84_RS05120 1030094 .. 1030110 + -10.8  -3.13403   GGTGCAGGACATCAT              CGCGCC CGACC GGCGCG              TCTTCGTGGGCACCG  64 138
CXD84_RS05130 NONE
CXD84_RS05135 NONE
CXD84_RS05140 1034328 .. 1034347 +  -3.4   -3.5764   CGTGTCGTGGAACAG            CCCGGACA TCAC TGCGCGGG             TTTCCCACTGGCGTT  51 510
CXD84_RS05160 1037874 .. 1037888 +  -2.7  -3.14881   CGACAGGCGCGGCGC               GCGCC CGACC GGAGC               TTCGTGACCCGATTC  44 4
CXD84_RS05165 NONE
CXD84_RS05170 1041685 .. 1041719 + -16.5  -2.53995   CTGCCCCCCGTATGA    CGGG-GTGCCTGTCCC CGCG GGGACAGGCACACCAG     TCAGTTCAGCTGGAT  77 61
CXD84_RS05185 1043349 .. 1043368 +  -4.8  -4.57073   GCGTAGAGTTGCTGC            GCGCGCGC ATGG GCGCGGCC             TTTTTCCACCAGATG  72 359
        guaB 1049089 .. 1049126 + -22.2  -4.86731   ATCACGCAATGCATC   GCGCACCGG-CAGAACC GGCCA GGTTCTGGCCGGTGCGC   TTTTATTTCCAACCG 100 58
CXD84_RS05210 NONE
CXD84_RS05215 1051024 .. 1051040 +  -3.7  -4.12902   AAGTCGGTGGATTGA              TAGCTGA ATT TCAGATA              TTTTACAAATAGTTG  61 39
CXD84_RS05220 1051339 .. 1051349 +  -6.8  -3.16564   AGTCCCGCAGGGTCT                 TCCG ACG CGGA                 TTGGTGACATGGGGC  52 8
CXD84_RS05225 1052905 .. 1052955 +  -5.2  -3.75332   CTGGTAGGCGAGCAG GTCCATGGCCAGTCTGGCTTCG TTGGTGT CGGCGGCGAGCTGGCCCTGGGC TTTGGCTTGGCGAAT  58 232
CXD84_RS05235 1055215 .. 1055237 +   -12  -3.58522   GCAAATCCGGGCTTG           CTGGCCGG GCTGTCG CCGGCCAG           TTTCGGCATCGTCAT  72 314
CXD84_RS05245 NONE
CXD84_RS05250 NONE
CXD84_RS05255 NONE
CXD84_RS05260 NONE
CXD84_RS05265 NONE
CXD84_RS05270 NONE
CXD84_RS05275 1063578 .. 1063599 +  -2.8  -2.74999   GGCCAGTCGGCGGCC           GCCGCGCC CGGGAT GACGCGGA            TCCTGTTGCGGGTTG  40 252
CXD84_RS05290 1067915 .. 1067937 + -10.4  -2.81464   AACGCAATAGGACGG           CGGCGCGGGC AGG GGCCGCGCAG           TATCATGGCTGGTCG  59 119
CXD84_RS05295 NONE
CXD84_RS05300 1069076 .. 1069114 +  -8.6  -2.70932   CTAGGCCGCCGCAAG   GCGGGCGCAAGGCCTCGC GCG GCCAGTCCGTGCGCCACC   TGCTTGCCGGCAACC  52 37
CXD84_RS05305 1070354 .. 1070368 +  -3.4  -3.35073   GGGGACGGACCTGGA               GGCGCG CAG CACGTC               TTCCTTGCCCATGAT  47 204
CXD84_RS05315 1072492 .. 1072538 + -14.5  -3.36273   CGCTGCGCGCCAGCG CAACGCCGCGGCCGTCGATGGCG GCT TGC-AGC-ACGGCCGCGGAGTTG TTGATCTTCAGGCCG  79 298
CXD84_RS05325 1074052 .. 1074080 +  -2.4  -2.57931   CAGGCCGTGGACCAG       GGGCA-G-GCATGC TGA GCGTGCGCGTGGCC       ATTGTCGGCGGTGGC  38 11
CXD84_RS05330 NONE
CXD84_RS05335 1076260 .. 1076277 +  -5.5  -2.63596   CGACCAAGACTGAGT             CCGCGCGT CTG GC-CGCGG             TCCTGTCCAATCACC  44 28
CXD84_RS05340 1077925 .. 1077939 +  -9.2  -3.44146   GATGGCCTCGAGCAG               CGCCGT GCG GCGGCG               TTCGTTGTCGCGGCG  61 408
CXD84_RS05350 NONE
CXD84_RS05355 NONE
CXD84_RS05360 1081363 .. 1081375 +  -6.2  -3.31726   GGGGGGGGGGGGCGC                GCCG GTCCG CGGC                TGTTCTATAACGGCC  53 427
CXD84_RS05365 NONE
CXD84_RS05370 1083939 .. 1083960 +  -2.9  -2.94099   CGAGAAAACCGGCGG           GGCGCGC-TG AAC CATGTGGGCC           TATCTCGTCAGGCGA  41 16
CXD84_RS05375 NONE
CXD84_RS05380 NONE
CXD84_RS05385 1087367 .. 1087387 +    -6  -3.53012   CCGCGCGCGGGAGGC            GGCCGTGG CCTGA CAGCGGCC            TTTGCGGGGGGCGGC  56 13
CXD84_RS05390 1088584 .. 1088597 +  -3.7  -3.16647   TGCCCTGGGCAGCCG               GCCCG ATTC CTGGC                ATTTTCATGCCTGGA  45 85
CXD84_RS05395 NONE
CXD84_RS05400 1089539 .. 1089575 + -18.8  -2.70932   GCCGCCTATGGCCTG   GCG-GGCG-CGCGCTTGC GGG GCGAGCGCGGCGCCGCGC   TCGTTGACGCCGGCC  87 44
CXD84_RS05410 1091359 .. 1091373 +  -3.4  -3.57144   CGCGCTCGCGCAGCG               CCGCCG TCA CGCTGG               TTTCGGCCTGGAACC  51 498
CXD84_RS05420 1092949 .. 1092959 +  -2.4  -2.80816   CGAGAACACCTCGAC                 CCTG GCG CCGG                 TGTGCTACCTGCAGG  40 310
CXD84_RS05430 1093259 .. 1093274 +  -3.2  -4.00066   GCGACGCAATCGGCG              CGCTAT TGTT AAAGCG               TTTGTCAGTTGTCCA  58 98
CXD84_RS05435 1094436 .. 1094470 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 439
CXD84_RS05445 1096068 .. 1096105 +  -3.9  -3.56594   GGTGCCCATATAGTC   GGCGGCCGCGGCCTGGGG CAG CGGCGGGTTG-GGCCGGC   TTTGGGCGAATTTCA  51 491
CXD84_RS05470 1100339 .. 1100357 +  -2.4   -2.8655   GAAAGCGATGATGCC             TTTCGCTT GAT AAGGGAGA             TCTACTATGCCTCGC  40 16
CXD84_RS05475 1100748 .. 1100778 + -16.2  -4.09685   TACATCGCGGATCGC       TGCAAACGGGGCTG TAA TGGCCCCGTTTGCG       TTTTGAAGGCTCAAA  95 50
CXD84_RS05480 NONE
CXD84_RS05485 NONE
CXD84_RS05490 1104589 .. 1104602 +  -2.3  -3.88137   CCGGACCCCGCCTCT               GCGGA GTGA TACGC                TTTGTCGGCAATTGT  54 17
CXD84_RS05495 1105102 .. 1105131 + -15.8  -4.41047   TACGGCAGGCCGCGA       CGCCGCCTGGTTC TTCGC GAACC-GGCGGCG       TTTTCCTTGGGCGCT 100 61
CXD84_RS05500 1105323 .. 1105357 +   -26  -3.45027   CCCGACCAGTAGTTC     CAAGGCCGTCAGTGAT CAC ATCACTGACGGCCTTG     TCTTTCGTGGGGACT 100 33
CXD84_RS05510 1107439 .. 1107472 + -15.9  -3.14564   AACTGGAGCTGTAGT     CCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGC      TTCCTCGGCCCGTGC  78 27
CXD84_RS05520 1109018 .. 1109041 +  -8.8  -2.58892   TGCCGGGGCGGGGCT          GTGCCGCC ATGCGCGA GGCGGCGC           TCAATTGATCTGCCT  52 263
CXD84_RS05525 1109378 .. 1109401 + -14.6   -5.0925   CAACCAGATCAAAAA          GGCTTGGCGA TTCA TCGCCAGGCC           TTTTTCGTTTTCGCA 100 35
CXD84_RS05530 1110185 .. 1110230 + -12.7  -3.05844   ATGTAGAACTGGATG CGCG-CG-ATACGGCCGCGCA CGTACT TGCGCGGCTGTATGCGGCGGG TCTTGAAGTCCACGA  66 360
CXD84_RS05540 1111073 .. 1111103 + -10.4  -4.86621   GCCGCACCGTGCGCA      GCCGCC-TGCCGC GATAGG GCGCCAAGGCGGC       TTTTTCATTGGGCGT 100 59
CXD84_RS05545 NONE
CXD84_RS05550 1112078 .. 1112094 +  -7.3  -3.20348   TTTGGGGTCGAATAA              TATGCGC ATT GCGTATA              TTCCGTATTCCTCCC  52 89
CXD84_RS05555 1113407 .. 1113465 +  -7.9  -4.07568   TTCCGTCTTCCACGG CCTGGACTGA-GCCGTATCGCGTGGCGC GCCA GCGCCACGCGAGCCCGCGTCAGACGCGC TTTTCCCCGCCCAGC  69 16
CXD84_RS05565 1115080 .. 1115100 +  -6.8  -3.40403   GCGGGCGGGCTGGTT           TCGC-CGCC CACC GGCGCGCGG            TTGTAGTGAAAGGGC  55 180
CXD84_RS05580 NONE
CXD84_RS05585 NONE
CXD84_RS05590 NONE
CXD84_RS05595 NONE
CXD84_RS05600 1121219 .. 1121229 +  -3.2  -3.05384   ATTGCCCTGTGGCGC                 TCGA CGG TCGG                 TTGAGTCCGCAGGGG  42 11
CXD84_RS05605 NONE
CXD84_RS05610 NONE
CXD84_RS05615 1125014 .. 1125028 +    -7  -5.15969   CTATGCGGGCTTGCT               GCCCCC CGA GGAGGC               TTTTTTGCCTTGGGG  93 161
        recA NONE
        recX 1131073 .. 1131119 +  -9.3  -3.33815   CGACTGAACGATGCC GCTTCGTGCGGGCGGCGGCGCGC GAT GCGGGC--CCGCCTGCCTGGGGC TTGCTTGCGGCCCGT  61 34
CXD84_RS05650 1134652 .. 1134672 +  -6.7  -3.40403   GGTCGGCCCGGGCCG            CGTCGCCGG CAA TCGGCTGCG            TTATACTCCCCAGGA  56 153
CXD84_RS05655 NONE
CXD84_RS05660 NONE
        sucD 1137435 .. 1137454 + -16.4  -5.78622   CCGCCTGTCCCAGGA            CGGCCCGC GATC GCGGGCCG             TTTTTTTTCGCATGC 100 57
CXD84_RS05670 1138396 .. 1138438 + -23.5  -5.07652   GCTGAACTACAATAG CGGGCTGTTCGGGCCCCGCC TTCA GGCGGGG-CTGACCAGCCCG TTTTCTTTTGGCCGC 100 47
CXD84_RS05675 1139319 .. 1139352 +  -5.9  -4.03413   GTTCGTGCTGGCCAT     CCTGGGGGTGGTGGC TTCG GTCATCGTCTCCAGC      TTTCTCTGACGCCCT  66 92
CXD84_RS05680 NONE
CXD84_RS05685 NONE
CXD84_RS05690 NONE
CXD84_RS05695 1143940 .. 1143957 +  -2.6  -4.23781   TCCGCCGGCCCGGCG             TCCGGC GACAAA GCCTGA              TTTCATTTTCATCAA  62 8
CXD84_RS05700 1144550 .. 1144591 + -23.8   -4.2231   GCCTGGGGCGGCCGG CGGCGCGGAAGCGA-CGGC AGGCA GCCGCTCGCATCCGCGCCG TTTTGCGTCATGCTT 100 53
CXD84_RS05705 NONE
CXD84_RS05710 1145595 .. 1145614 + -12.8  -5.07652   GCCGGCATGATGCAA            GCCCTCGG TCAT CCGGGGGC             TTTTCTTTTGCCGCG 100 50
CXD84_RS05715 NONE
CXD84_RS05720 1147500 .. 1147538 +   -11  -3.01712   GGGTCGCGGCGTTCA  TGGCGG-CCGCGGCGGCG CCGTC TGCC-CCGCGCACCGCCA  TCTTGGCGCGGCAGG  62 185
CXD84_RS05730 NONE
        cpaB NONE
CXD84_RS05740 NONE
CXD84_RS05745 1153276 .. 1153289 +  -8.1  -3.53012   GCTGATCCGCCGCAT               CGTCG CCAT CGACG                TTTGAGGAGCCGGGC  60 7
CXD84_RS05760 NONE
        folD 1156665 .. 1156679 +  -3.4  -3.75933   CGTGCGATCGGAGAA               ATCGCC GCC GGCGGA               TTTGCTCGCGTCTAT  55 187
CXD84_RS05785 NONE
CXD84_RS05790 NONE
CXD84_RS05795 1164406 .. 1164416 +  -6.8  -3.07816   CGTCGATATCGAACG                 GGAG CGT CTCC                 TTGGATAACTCGCAC  51 7
CXD84_RS05800 NONE
        purU NONE
CXD84_RS05810 NONE
CXD84_RS05815 NONE
CXD84_RS05820 1169188 .. 1169209 + -14.5   -5.1287   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 53
CXD84_RS05830 1170585 .. 1170607 +  -9.8  -3.40403   CTTACAGGCCCAGTA           CGGCCTGCAT GTC GTACAGGCCG           TTGTCCTGGCGCGCC  65 76
CXD84_RS05845 1172522 .. 1172543 + -15.9  -6.10489   GCTCTACCAACCCTG           CCTCCAGGC GCAA GCCTGGAGG            TTTTTTTTTGCGGTT 100 48
        hrcA 1176306 .. 1176323 +  -5.5  -3.54382   GCCTGCGCGCGGGGC             GGCGCCT TGAG AGGTGTC              TTCGTGTTTCTTCGC  54 62
CXD84_RS05865 1177440 .. 1177457 +  -8.3  -2.52676   CTGTGGTTGAAGCGG             CGGGCGC GAGC GCGCCGG              TCCATTCCGCGAATG  51 50
CXD84_RS05870 1177768 .. 1177793 +  -3.8  -5.52384   GGGCGGCGACGCGCC         GTCCGGCGGC GTCATG GGAGCCGGGC          TTTTTTTCCTGGAAA  90 54
        grpE 1178413 .. 1178457 +  -5.6  -3.05384   GTCCGGCGCTGGTCG TGGTGTCCGCCGGCCAGGGCTG AAG CAGGCATGGCCGCCGC-C-CCA TTCGATCCCGCCGAG  47 3
CXD84_RS05880 1178853 .. 1178871 +    -3  -2.78725   AACTCCAGTTACTGG             GGGACTGA GTT TCAAACCC             TGATTCCTACCGTAT  40 55
        dnaK 1180856 .. 1180898 + -18.5  -3.27298   GGCCGAACGATGACG TGCGATACGCCCGGTAGCTG ATTC CAGCTACCGGGCGCG-CGCG TTGATGATTCAGAAC  93 42
        dnaJ 1182141 .. 1182170 + -22.3  -2.88249   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 93
CXD84_RS05900 NONE
CXD84_RS05905 1186441 .. 1186472 +  -7.9  -3.85864   TGGGCCAGGCGTCGA      GCA-GCCGGCGCAG CCAGA CCGCGCCGGCCTCC      TTGTTGTAGTGCTCG  67 187
CXD84_RS05925 NONE
CXD84_RS05930 1190311 .. 1190339 + -16.7  -4.38712   CCAGTAAGCGGCGCC        GGGCAAGCCCCCG ATC CGGGGGCTTTTCC        TTTTCTAGCGCTCGG 100 34
CXD84_RS05940 1192263 .. 1192287 + -11.4  -5.02074   GCATCAGCCGAGAAA         CCCGC-GCCCC TATG GGGGTAGCGGG          TTTTTTGCCGAATGG 100 60
CXD84_RS05945 1193465 .. 1193482 +  -3.3  -2.74864   TGTGGGATTCCGTTT             CGGGTTG AGGC CGGTCCG              GTATTTGCTTCTACA  40 83
CXD84_RS05950 1194833 .. 1194843 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS05955 1196215 .. 1196237 +  -7.6  -3.17212   CGCGCAGGCGCGCCA           GCAGTTCGCC GAC GCCGAACGGC           TTGGTCAGGTAGTCG  53 393
CXD84_RS05990 NONE
CXD84_RS05995 1207244 .. 1207278 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS06020 NONE
        lolA 1213185 .. 1213205 +  -3.3  -3.05596   CCTGCGGGCCAAGGC           CGCCGCAT GGTGTA ATGCG-CG            TTGGATCCGCCCGTG  42 74
CXD84_RS06030 NONE
CXD84_RS06035 1216009 .. 1216026 + -11.3  -4.98531   CACGTGAACCAGAAA             CGGAACC CGCG GGTTCCG              TTTTTCATTTCGGCG 100 54
CXD84_RS06040 1216649 .. 1216666 + -14.1  -4.95957   GTGCCGCAAAAAAAG             GCCGCCC ATCC GGGCGGC              TTTTTCATTGATTTG 100 167
CXD84_RS06055 1218057 .. 1218070 +  -9.5  -3.28791   GCCAGGAAGGCTGAC               CGGCC CGCG GGCCG                TTATGCGCCAGCCGT  61 27
CXD84_RS06065 1219698 .. 1219719 +  -7.3  -2.78463   GGGAAGAACACCATC           TCGCGCGCCA TGC TGG-GCGTGA           TCTGCTGCAGCGCCT  49 352
CXD84_RS06120 1232833 .. 1232881 +  -6.6  -2.70932   CCGCCGCGGACAACG AGGAGCGG-TCCG-GCCCGGGC TGACCGC GCCCGGTCACGGATCCGTGCCA TCATTGCCGGCGGCG  47 3
CXD84_RS06125 1233761 .. 1233771 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS06130 NONE
        yaaA 1235576 .. 1235613 +  -3.4  -4.21812   CGCAAGCAGGCCTGA  CAGGACG-CGCG-ATGTC GGCA GGCTTACGCGTCTTCCTG   TTCTTTTCGCTCGGC  63 26
CXD84_RS06140 1237297 .. 1237311 +    -7  -3.72576   CGGCGTCGGCGCGCT               CGCCGG TCT CGGGCG               TTTCCTCGCCCGCCG  61 494
CXD84_RS06150 NONE
CXD84_RS06155 1240855 .. 1240889 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        thrS NONE
CXD84_RS06185 1246143 .. 1246179 + -19.3  -3.05463   CAGGCTGATCCCATC    CCCGGCCCGGTTGCCCT CGA GGGGCGTCCGGGCCGGC    TTGCGTGCGGCCCGT 100 33
CXD84_RS06190 1247235 .. 1247248 +  -3.1  -2.87243   GCCGGCTGAACTTGC               TGCTA TGAC TGGCA                TCGTTATCGTCGTGC  41 32
CXD84_RS06195 NONE
CXD84_RS06200 1248039 .. 1248065 + -10.8  -2.62735   AAAACCTCAGGTTCC         GGCAGCCCGC CGTCGGC GCGGGCTGCA         TCGTCTACGCGCTCT  59 42
        ptsP 1249860 .. 1249877 + -10.5  -5.64006   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT 100 47
CXD84_RS06220 NONE
CXD84_RS06225 1253025 .. 1253043 +   -16  -5.31275   GGGCGCGGCAATGCG             GGCAGGCC TTG GGCCTGCC             TTTTTTGTCGTCAAA 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
CXD84_RS06245 1256183 .. 1256193 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS06250 1257437 .. 1257477 +  -5.9  -3.29144   CGGGGCGGCCCTCGG  GATGCCGCGGGAGGTCATC CGT GATGTCGTGCCACGGCGCC  TTGTGGGCGACGTAG  53 265
CXD84_RS06285 1263371 .. 1263386 +  -7.5  -2.71011   GCGGAACAGGGACCG              GCGCG CCGTCC CGCGC               TGATTGCGAAGGGAT  51 7
CXD84_RS06290 1264637 .. 1264656 +   -15  -5.15634   CGCCCGCATGGAAAA            CCGGACGC GCGA GCGTCCGG             TTTTTTCATGGCCTC 100 72
CXD84_RS06300 1266248 .. 1266274 + -17.3  -5.26875   GCCGGCGCCGTCCAG        GCCCGC-CGCCC TTCG GGGCGCGCGGGC         TTTTTTCATTGGAGG 100 46
CXD84_RS06305 NONE
CXD84_RS06310 NONE
CXD84_RS06315 1267183 .. 1267201 +  -4.4  -2.77523   CCGTGCCCTTGCCGC             TGGCGCTC TGA GTCCGCCA             TGATCTTCCTGCGCA  43 15
CXD84_RS06320 1267784 .. 1267801 +  -9.1  -3.41836   AAAATAGCCGATTCG             CGGC-CGC CTG GCGGGCCG             TCTTTCCATCCCTAT  63 129
        purE NONE
CXD84_RS06330 1269527 .. 1269541 +  -3.4  -2.60075   GCGCTGGGCATGGCC               GCGCCG CTC TGACGC               ATTGATTCCCGCCGC  39 14
CXD84_RS06335 1270626 .. 1270642 +  -7.2  -2.62184   AACTCCTGATTGCCG              CGCCTG CCGGC CGGGCG              TAATCTCACGCGGAC  47 56
CXD84_RS06340 1271766 .. 1271803 + -10.5  -3.06162   CTAGGGCGAGGGCGG   CGGGGCGGGCAAGATCGC CAA GCGATAC-GCCTGTCCCG   TATTGCGGTACGCTA  60 37
CXD84_RS06345 1272707 .. 1272725 +  -5.9  -3.62518   GTATTTGATGGGAGA             GCAAGGG GAATA CCCTAGC             TTTCCGGATCTTTCG  59 50
CXD84_RS06350 NONE
CXD84_RS06355 NONE
CXD84_RS06360 NONE
CXD84_RS06365 1276095 .. 1276118 + -19.6  -2.75064   TGGGTTGAGCCCGGC          CTGCCGCGCG CGCC CGCGCGGCAG           TGGTTCCATGGCCGG  93 33
CXD84_RS06370 1277805 .. 1277835 +    -9  -3.89956   CCGGCACGCCGGGCG      CGATGCCGC-CGCG CAACA CGCGGGCGGCG-CG      TTTGGTCTATCCTGC  73 55
CXD84_RS06375 1278449 .. 1278488 + -12.1  -3.73072   GCACGCGGGGAAGTT  TGCCG-GTGCCAGTCCCC CTTGC GGGGACAGGCACGCGGGG  TTTAGTAGAAGGCTT  77 122
CXD84_RS06390 NONE
        xerD NONE
        ybaK 1284049 .. 1284071 +  -9.1  -2.94144   TCGTCGCATGACCAG          GCCGGCGCGT TACG GCG-GCCGGC           TCCTTTCCATGGAGA  56 100
CXD84_RS06405 1284645 .. 1284659 +  -5.6  -3.57144   CGCAGTTCCTGGCGG               TGCTGG GCA CCCGCA               TTTCGCACTGACCCC  54 0
CXD84_RS06410 1285179 .. 1285189 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS06415 1286653 .. 1286671 +    -3  -4.07885   CGGATAGTTGCGGCC             CAGCGC GTGGGCG GCGCGG             TTTTCCGAGGACATC  58 485
CXD84_RS06430 1289363 .. 1289377 +  -9.2  -3.28712   AACTGGGAAAACATC               GCCGCG CTG TGCGGC               TTCTAGGCCGCGCGC  61 187
CXD84_RS06435 NONE
CXD84_RS06440 1295978 .. 1296036 + -24.1  -2.71731   TGATGGGTCCGGTCG -G-GCCGGGGCTCGCCAGCTACGCATTCT GTT AGAATGCGTAGCTGGCGGGCCCCTTCGCA TGGTTCGGCGGTGAA 100 521
         ffs 1296147 .. 1296182 + -10.7  -2.70932   AGGGGCGCCGTGACC   GGAATGTATCGCGATCC AGGC GGATCGC-AT-CATTCC    TGGTTGCGGCGCCCC  60 54
CXD84_RS06450 NONE
CXD84_RS06455 1298751 .. 1298785 + -13.5   -2.6927   GCTGCCGTTCTGATA    TCGC-CTTGGCGGCCC AGCC GGGCCGCCGGGCGCGC     TGCTGTCTGCGCGAT  67 28
        recR 1299442 .. 1299452 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS06465 1300645 .. 1300674 +  -2.7  -4.13767   CGCCGTCCTCGAGTA       TGACC-AGGCGGGC GTT GCGCGCATCGGCCA       TTTTCACATCCGACA  61 214
CXD84_RS06485 1303693 .. 1303727 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS06525 1311361 .. 1311413 +   -11  -3.28791   CGCGCAGGCATGCTG CGCCGCGCGGCCATCCGGCGGGGCC GCAA GGCGCCGCCGGGCA-CCGCCCGATG TTATCCCCGGCAAAT  66 298
        mutS NONE
CXD84_RS06540 1316290 .. 1316311 + -15.9   -4.4078   GGGCAGGCATGCTAA           TGGCCTCCG GTAA CGGAGGCCA            TTTTCATTGCGCGAA 100 520
CXD84_RS06545 1317094 .. 1317117 + -18.2  -5.40474   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 50
CXD84_RS06565 NONE
        glnH NONE
        glnP NONE
        glnQ 1323572 .. 1323593 +  -8.8  -3.05844   GTGGAAACCGCGTCG           TCGTGCAT CGTGAC ATGCACGA            TATTGGCGTCGGCCG  55 165
CXD84_RS06610 1329394 .. 1329405 +  -4.4  -3.35679   GTTCGTGGGACGCGG                CTGA GGTT TCAG                 TTCTCGCTGGCGGCC  51 22
CXD84_RS06620 1332152 .. 1332162 +  -3.2  -3.89614   TTACGCTCGGCTTTG                 GTCA GAT TGGC                 TTTGTCGCCCTTGGC  58 441
CXD84_RS06645 1334915 .. 1334941 + -12.2  -3.05384   GCGCAGCGCCGCCAC         CTCGGCGTCGCC CGG GGCGGCGTCGAA         TTCGGTGAGGCCGGC  66 492
CXD84_RS06655 1337192 .. 1337208 +  -6.5   -4.8083   AACTTGCGGCCGCGC              TGTCGGC CAC GCTGGCA              TTTTTCGTGCTGTTG  82 139
        rdgB 1341335 .. 1341345 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS06675 NONE
CXD84_RS06680 1343699 .. 1343721 +  -7.6  -4.16842   CCAGGAGTGCGGGAC           CTGGCACGCA TTT TGCTTGCCTG           TTTATTGCCAGTCGG  74 133
        glnA 1345191 .. 1345243 + -22.1  -3.11634   ACTACAGCCTGTAAT CCGGGAGGCTGTGCGGCG-GCGGGCC TCGC GGCCCGCCCGCCGCGC--CGTCCCGG TTGCCTCCTATGACG 100 27
CXD84_RS06690 NONE
        ntrC NONE
CXD84_RS06705 1349627 .. 1349649 + -11.9  -4.56597   TGCCGTAAAGTGAGA           CGGGCGCCG CCAGC CGGCGCCCA           TTTTTCCACGGCGCG 100 33
CXD84_RS06710 1350791 .. 1350825 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 214
CXD84_RS06735 1356434 .. 1356447 +  -9.5  -5.27335   CGCCGCCAGGAAAAG               CCGCC TTCG GGCGG                TTTTTCTTTGGCCGC 100 48
        dkgB 1359928 .. 1359945 +  -2.6  -3.65351   GAGGGGTGGGCGTAT             TGCTGG ACAAGA CCGGCG              TTTCGCTGACGCTGG  51 478
CXD84_RS06760 NONE
        recG NONE
CXD84_RS06770 1365699 .. 1365725 +  -9.4  -3.14132   GGCCGGCGTGGCGAA        GCCC-GGCCGG AAATGC TCGGCCAGGGC         TTGCTCGACCACGCG  59 58
        mmsA 1368237 .. 1368266 + -18.6  -2.67316   GTTCGGGCTGAGCGC       GCGCCGGCGCGGC CGGGC GCCGCGCCGG-GC       TGCCTTGTTGCGTTC  87 30
CXD84_RS06785 1368853 .. 1368874 + -15.9   -5.4505   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 47
CXD84_RS06810 NONE
CXD84_RS06815 NONE
CXD84_RS06820 NONE
CXD84_RS06825 NONE
CXD84_RS06830 NONE
CXD84_RS06835 NONE
        tviB NONE
        tviC 1384177 .. 1384227 +  -2.7  -3.07816   GCCGCCATGCCCTGG TACACGCAATTCCTG-CG-ATGA TCGAGCT TCATTCGTCAGGCATCGCGCGTA TTCCGTACCTGACGG  42 5
CXD84_RS06850 1386262 .. 1386280 +  -5.2  -3.13403   GATGAGCCGGAGCAT             GGCATGAG CGC CTCGTTCC             TGTTCCTGCAGGGCG  49 36
CXD84_RS06855 1387458 .. 1387468 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD84_RS06860 NONE
CXD84_RS06865 NONE
CXD84_RS06870 1391019 .. 1391053 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS06935 NONE
CXD84_RS06940 1404407 .. 1404443 + -11.4  -3.01712   TATGCGCCCGATGCC    GTCGTGCGGGCGCTGG ACGCG CCGGCGCTGGCGCGCC    TGTTCGCGGCCAGCG  65 427
CXD84_RS06950 NONE
CXD84_RS06955 NONE
CXD84_RS06960 NONE
CXD84_RS06965 NONE
CXD84_RS06970 1411056 .. 1411082 + -22.3  -3.05384   GGCAAGTAGGCGCGG         GCGGGCGCGGG CGGGC CCCGCGCCCGC         TTGCGTCGCGCACGC 100 32
CXD84_RS06985 1413770 .. 1413817 +  -5.4  -2.73468   ACGGCGATGACCGCG TGCGCGGGCTC-CAGCCGGGT GCTCACG GTCAGGCGGCGCGCTCGCGCA TGCTTGAGGATATTG  43 191
CXD84_RS07000 1419585 .. 1419605 +  -8.2  -3.34895   CGATGGCGGCATCTT            GCCTTGGC GAATG GCCACGGC            TTGCTTCAGGCTGGC  59 267
CXD84_RS07020 1421711 .. 1421749 + -10.1  -3.65351   GAACCGGTCTGAGCG  CCGGGGCGGCGGCG-CCC GCAT GGACCGCCGCCGTCGCGA   TTTCCATGACGGTGC  67 29
CXD84_RS07050 NONE
CXD84_RS07055 1428407 .. 1428424 +  -6.3  -2.62184   GCGCCGTGCTCGACA             TCAACGGC GGC GCCG-TGA             TGCTCTGACACGCCA  46 0
CXD84_RS07060 1429834 .. 1429848 + -12.8  -4.15044   GTCGCACTGCGCCAG               CCGGGC GTA GCCCGG               TTTCTTCAGGCGCGC  86 383
CXD84_RS07070 1431778 .. 1431793 +  -5.4  -3.67597   CAGTCGGTGCCGGCC              GG-CCTG CCG CAGGGCC              TTGTTCCCTGGGAGC  57 286
CXD84_RS07080 1433513 .. 1433547 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS07120 NONE
CXD84_RS07125 1441075 .. 1441087 +  -4.8  -3.01712   CAGTACGATATCGTG                CTGG CGCGC CCAG                TCTTCCACCCCCGCG  46 363
CXD84_RS07135 1442097 .. 1442107 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS07140 1443584 .. 1443639 + -11.7  -4.07568   CCAGCGTATAGCCGT CCGGGGTGGCCTTGGCCAGCGCG-TCG GCGC CGATCGCGCCG-CCGCCGCCGCCGCGG TTTTCCACCACGACC  82 498
CXD84_RS07150 1447196 .. 1447209 +  -2.3  -3.01918   CGCAAACCGGGAGTC               CTGCC TGAT GGAAG                TCGTTTATGCCCTGG  41 18
CXD84_RS07155 NONE
CXD84_RS07160 NONE
CXD84_RS07165 NONE
CXD84_RS07170 NONE
CXD84_RS07175 1450344 .. 1450354 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 117
CXD84_RS07180 1451391 .. 1451416 +  -8.2  -2.70932   TATGGTAGAAAGGTC         AGCGGCAGGCC ATGAC GGCC-GCCGCC         TACTTCAAGGAGCGA  52 58
CXD84_RS07185 1452009 .. 1452024 +  -4.6  -2.84454   CGCATTCAGGCAAAA              TGTCGG CTGT CCGACC               CTTTAAGTCCTTTAT  44 90
CXD84_RS07190 NONE
        tadA NONE
CXD84_RS07200 1454389 .. 1454435 +    -7  -4.56597   AGCACACCCACTGAA CGCAGGCCCCGCTACGTGTCCT GCC GGGGCACCCAGGCGGGCTGGCG TTTTTCCAGGAAAGA  77 27
CXD84_RS07225 1461001 .. 1461044 + -12.2  -3.28924   GGCATCGAGGCGTAA GCGGGGCGCCCGC-GCGCGGC CTG GCCGCGCCGCCCGCGGCATGC TTATAACGACAGGTA  71 26
CXD84_RS07230 1461964 .. 1461987 + -17.4  -2.61695   TCATACCGATACCGT          GTCGCGGGCC CGCC GGCCCGCGGC           CTATTTGCCGATCCC  80 57
CXD84_RS07235 NONE
CXD84_RS07240 1463790 .. 1463812 + -11.9  -3.15544   AATACGTCTGAACCA           CGCGCGGGC CTGGC GCCCGCGCC           TTCATCGCCATGACC  66 30
CXD84_RS07250 1465734 .. 1465756 +  -6.2  -2.78463   AGGGGGCATCCGGCG           CGCCGCCA CGTACAA TGGCGCCG           TATGATGCACACGCT  47 39
CXD84_RS07255 1466324 .. 1466369 + -11.7  -3.04144   CACCCGCGGGCGCGG CGACTG-GGACGTGCAGGCCTG AGC CAGGCCCGCGCGGCCTCAGGCC TGTTCGCCCTCGCCG  65 4
        tsaD 1470752 .. 1470770 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 204
CXD84_RS07290 NONE
CXD84_RS07295 NONE
CXD84_RS07300 NONE
CXD84_RS07305 NONE
CXD84_RS07310 1476656 .. 1476683 + -15.5  -3.75153   GATCCGCAGGAATGA        CGCCCCGGGGC TGCAAC GCCCCGGGACG         TTTGCGTTGGCGCGC  85 49
CXD84_RS07315 1477676 .. 1477729 + -14.8  -3.55444   GCGGACCTTCTGAGG CG-CTG-CCG-G-GGACGTCCCGTCC GGTGGG GGACGGGGCGTCCGCTCGGACAGCCG TTTCCGGCATGGCCC  81 28
        rlmD 1479200 .. 1479231 +   -18  -3.25169   CTGCCTGAGGCGGCC      CGCCGGGCGGCG GCGTTCAG CGCCGCCCGGTG       TTGCTCAGTTCTTCG  89 33
CXD84_RS07330 1480013 .. 1480066 +  -4.3  -3.52877   TTAGCGATCGATTGC TTGAGA-CTATCAATTAATTAGATTT ATT AAATTTTATTAATTGATAGCTAACAA TTATCATCTCTTCAT  52 48
CXD84_RS07335 1480864 .. 1480887 +   -21  -4.32201   CTGGCCTGATGCCTG          GCCGGCGGCG CTGC CGCCGCCGGC           TTTTCCCTTCCTTCG 100 32
CXD84_RS07340 1482551 .. 1482571 +  -8.1  -3.53811   GCCGCTGCCGTGCAG            CCCGAAGCC GTC GGCGGCGGG            TTTGCGCACGGTCAG  60 170
CXD84_RS07355 1486324 .. 1486370 + -20.3  -4.87626   TCGGCCTGGAACATG GCCCGGTTGGTGGCGATTCCTT CCAT GAGGAA-CGGCACCAGCCGGGC TTTTTCCTGTTCGGC 100 116
CXD84_RS07365 1487594 .. 1487604 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS07375 1488851 .. 1488892 +  -7.9  -3.89354   GCTGCTTGATCCGCC TCG-GTGGCGGTGCCGACCG TGC CGGTCAGCGTCACCACGCCA TTGTTCGTTTCGACC  67 268
CXD84_RS07410 1498069 .. 1498104 +   -19  -3.14132   CCGGGTGCCCGAGTG    CCCGGGTGCCTGTCCC AGCG GGGACAGGCACCAGGA     TTCCTGCGGGGACAG  90 50
CXD84_RS07420 1500152 .. 1500173 +  -2.1  -2.87132   AACTGCGGGCCTTGT           TGCAGGCGT AACG GCGCGGGCA            TGTCTGCGGGCGGCC  40 15
CXD84_RS07425 1501443 .. 1501471 + -10.1  -2.77994   TAGCGCCGGCCGGGT        TCGGCGCGCCGCC GAG GGCGGCGCGGAAA        TGGTTGCAATTTCTG  57 38
CXD84_RS07430 NONE
CXD84_RS07435 NONE
CXD84_RS07440 1503525 .. 1503540 +  -6.2  -4.83722   GTCTATGGCATCAAG              TTGCAT GGTT ATGCAA               TTTTATTCTGCTGTT  86 490
CXD84_RS07450 1504948 .. 1504963 +  -8.2   -3.4247   TCCAGCGCCGGCGCG              CCGCCG CCTT CGGTGG               TCTTCTTCAGCTTCT  61 343
CXD84_RS07475 1512359 .. 1512369 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS07480 1513780 .. 1513790 +  -2.4  -4.06419   CAGGGTGTCAGCATA                 CAGG TAG CCGG                 TTCTTTGTAGCAAAA  58 432
CXD84_RS07490 NONE
CXD84_RS07495 1517505 .. 1517559 + -15.8  -2.61383   GCTGGACATCATCAC GGCCTGAGCTTCGCGTCTTGCGCCCGC ATCG GCTGGCGCAAGACGCG--GCA-GGGCC ATTCTCAATAGCGGT  74 19
CXD84_RS07530 1526937 .. 1526956 +  -7.1  -3.42354   AAGGTGTATTGGCCG            CTGGCCT TGGCCT GGGCCAG             TTCTGCCTTGACCTG  58 289
CXD84_RS07540 1528879 .. 1528900 + -14.4   -2.6155   CCGGGCCGCGCCGCG           GGGCCGCC TATAAT GGCGGCCC            GTTGGTCTTCCCAGG  69 45
CXD84_RS07545 1529211 .. 1529237 +  -7.9  -5.06816   GGCGCCATCTGACGC        ACTGAGCGCGCC ATCG GGCGCGC-CGGC         TTTTTCTTGGACAAT  88 21
CXD84_RS07550 1529798 .. 1529809 +  -2.2  -4.05004   AGTGCCGTGCCTTCT                C-CGG CGT CCGCG                TTATTGTTCTACTGC  58 246
CXD84_RS07555 1530110 .. 1530125 + -11.8  -4.93547   AGCGCGTCCATAAAA              GCCCCC GCCA GGGGGC               TTTTTCATTGCTTGG 100 48
CXD84_RS07560 1530973 .. 1530983 +  -3.2  -3.77808   GCGAGATCTTCAAGC                 GACG CGG TGTC                 TTGTGTTCTGGTCGC  56 261
CXD84_RS07565 1531350 .. 1531375 + -16.9  -5.06414   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 92
CXD84_RS07575 NONE
CXD84_RS07580 1534171 .. 1534197 + -14.4  -3.01924   TCGATAAGCGTTGAT         CGCGCCGGCC CTCATCC GGCTGGCGCG         TCTTCACCAGAGATA  72 78
        clpX 1535548 .. 1535582 + -19.6  -3.05819   GATCCCGGCCGCCAT     TGCAAGAAAACCCGTT TGT AACGGGTTTTTTTGCA     TCTTCCCGCTATCTG 100 46
CXD84_RS07590 1538203 .. 1538227 + -22.9  -5.45726   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTCGGCTATC 100 59
CXD84_RS07600 1540707 .. 1540723 +  -7.2  -4.21827   TGAGCCCGCGCGCCA              TCGCCG CGATC CGGCGG              TTTTCCCGTGTTTCA  72 38
CXD84_RS07605 1541707 .. 1541727 +  -2.4  -3.16564   GGTGCCGTTGGCCAA            GTCGCTCG GCGTA CGGGCGGA            TTGATGCCATGAAAA  42 1
CXD84_RS07610 1542175 .. 1542188 +  -2.3   -2.6563   GGCGATGGTGGCCGA               GTGGC TGAT GCAAC                TGCGTTATTGAGCGC  38 1
CXD84_RS07615 NONE
CXD84_RS07620 NONE
CXD84_RS07625 NONE
CXD84_RS07630 1545496 .. 1545523 + -11.3   -3.1876   TCAAGGCCGAATTGC       CGC-CGCTGCCGG CCGA CCGGC-GCGCGCG        TTCGTGGATGGGCTT  64 125
CXD84_RS07645 NONE
CXD84_RS07650 NONE
CXD84_RS07655 NONE
CXD84_RS07660 1549929 .. 1549945 + -13.7  -3.65812   GAGCCTTCAGCGCGG              CGTGGCC GGC GGCCACG              TTGTATTGCCCCACC  80 47
CXD84_RS07670 1551795 .. 1551824 +    -2  -3.64703   CGCACGCGCAGCCGC       TGCCGCCCGCCGG CAACC CCGGCGC-TGGGA       TTTACATGCCCCGCA  51 392
        uvrB 1557103 .. 1557117 +  -3.5  -2.70932   GAAAGACGGAAATTA               GCGGA GAAAA TTCGC               TCGTTACAAACAGGC  41 47
CXD84_RS07695 1557896 .. 1557911 + -11.8  -5.00616   CCCAAAATGAGAAAA              CCGCGC GACT GCGCGG               TTTTTTCCGACCGAG 100 96
        iscR NONE
CXD84_RS07705 NONE
        iscU NONE
        iscA NONE
        hscB 1561126 .. 1561146 +  -2.4  -3.32844   GGCGGCCGGCCCGAT            GCGCGGCA ACCGA TGACCCGC            TTGTGCGGTGCCGCG  44 81
        hscA NONE
         fdx NONE
        iscX 1563630 .. 1563664 + -24.4  -3.53012   GCCGGCGCGCCGCCC     GGACAAGGGCCCCGTC ATG GACGGGGCCCTTGTCG     TTTCGGGGCCGCGCG 100 48
CXD84_RS07740 1564791 .. 1564825 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS07755 1567692 .. 1567702 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS07765 1568747 .. 1568766 + -12.1  -5.60993   TGCGTTTGGCTTGAG            CCCCGCG AACCCC CGCGGGG             TTTTTTTATGGCCCG 100 66
CXD84_RS07775 1571536 .. 1571559 +  -9.4  -3.15249   CGCTACGTCACCACG          GCCTGCGCGC TGGC GCGCGACGGC           TTGATCGACGGTATC  59 364
CXD84_RS07785 1573185 .. 1573209 +  -7.2   -3.4072   CATTTCGTGCCGGCC          GGCGTCAA CTGCTATTC TTGACGCC          TTCTCCTGCCAGGTC  56 54
CXD84_RS07790 1574081 .. 1574094 +  -2.3  -2.70354   GCGCGTGGGCGACGC               GGTCG AGAT CGAAC                TGGATTTCTAGCCCC  38 1
CXD84_RS07795 1574613 .. 1574640 + -10.5  -2.55253   GGCCTGACGGCCGTT        GCGCGCGCGCCC GGCAA GGGCGC-CGCGG        TCACTTCCGATTCGT  57 34
CXD84_RS07800 1575732 .. 1575774 +  -7.7  -5.59357   CGGCGCGGGAACCCG GGGCGGCATCC--TCACACGC GGC GCGTGCAAATGGATACCGCCC TTTTTTTAATGTCAT 100 49
CXD84_RS07805 NONE
CXD84_RS07810 1578524 .. 1578542 + -17.4  -5.78622   AGGCGACGCAACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGCGTAC 100 47
CXD84_RS07825 NONE
CXD84_RS07830 1581434 .. 1581446 +  -6.2  -3.30124   TTCGCCCGGCTGAAA                GCGG TCAGT CCGC                TTATAACAACTCAAC  53 28
CXD84_RS07835 1583043 .. 1583100 +  -3.1   -4.2679   TATTCTGGGGAATAT CCAAGAACTGAGTCGCCGCGCGGCGCCG CCA TGGCGCCGCGCAGC-ACGTAGGAGATCG TTTTCGTGCAAATTC  63 15
CXD84_RS07840 NONE
CXD84_RS07845 NONE
CXD84_RS07850 NONE
CXD84_RS07855 1587894 .. 1587912 + -17.4    -5.252   GCGCGACGCGCTGCG             GGCCGGCC GCT GGCCGGCC             TTTTTTATGGCCATG 100 42
CXD84_RS07865 NONE
CXD84_RS07870 1591639 .. 1591659 +  -3.2  -2.62616   GACTTCCCGTTCCTA           GCG-GGGCA TTCC TGCCAGCGC            TGGTATCGGCCCTGA  39 25
CXD84_RS07875 1592484 .. 1592500 +  -7.9  -3.63991   CCGCGCAACGGCGCA              CGGCGCT GCA GGCGCTG              TTCTTCGACATGGTG  63 398
CXD84_RS07885 1594948 .. 1594973 +    -6  -4.15044   ATTGGTCAGTTTCTA         CGCCAGCCAA TAAGCC TCGGCAGGCG          TTTCTTCACGCAGGA  66 13
CXD84_RS07890 NONE
CXD84_RS07895 1596418 .. 1596449 +  -8.7  -2.94218   TCCGGGCAAGGAGTA     GGG-CGGCGGCGCTG GCAT CGGC-CTGCCGACCC      TCTATAATCAAAAAT  54 25
        alaS NONE
CXD84_RS07905 1599371 .. 1599398 + -21.4  -3.01791   GCGCCTGCCGGCAAG        CAAACGGCCCGC GCAA GCGGGCCGTTTG         TCTTGGCGCGAGCGT 100 41
CXD84_RS07915 1600681 .. 1600699 + -10.2  -4.55295   CTGCATTTCTTGAAA             GCGCTGCC TAT GCCAGCGC             TTTCTTTGTCCGCAA  89 139
        rimM NONE
        trmD 1602504 .. 1602516 +  -9.1  -4.08216   GGCCAGTCCGCAGCG                CAGCG CCA CGCTG                TTTTCGGCCGACTCG  72 400
CXD84_RS07960 1607886 .. 1607912 +   -15  -3.17075   CGCTTGCCATGGGCA         GGAACCCCCGGC CGC GCCGGGGGGCCC         TTGCGTTCAGACGCC  76 85
CXD84_RS07970 NONE
        rlmN NONE
CXD84_RS07980 NONE
CXD84_RS07985 NONE
CXD84_RS07990 NONE
CXD84_RS07995 NONE
        bamB NONE
         der NONE
CXD84_RS08010 1620227 .. 1620241 +  -9.2  -2.52464   GTAGAGTACTGATTT               CGGCGC ACT GTGCCG               TCACTTAAAACAAAC  54 118
CXD84_RS08015 1620537 .. 1620566 + -17.2  -4.36595   AGCATTACCCTTGAT       TGCCCGCC-GCGC GGCCA GCGCCGGCGGGCA       TTTTCGCTTTGGCTC 100 53
        hflX NONE
        hflK NONE
        hflC 1623988 .. 1624017 + -19.3  -4.98531   AAAACATTCCGCATA       CGGCTGAGCGGGC TTAC GCCCTCTCAGCCG        TTTTTCGTTTGGGCA 100 122
CXD84_RS08035 1625283 .. 1625293 +  -6.8  -2.55896   GATTTCCGGATTTCC                 CGAG AAA CTCG                 ATATTGATTCGTAAA  47 76
CXD84_RS08040 1626609 .. 1626642 + -18.1   -3.9461   TCAAGGGGTAGGGCG     CCGCGGGCCGCGCCCC GTT GTGGCGCGGCCT-CGG     TTATTATTCGCCAGG 100 30
CXD84_RS08045 1627427 .. 1627437 +  -3.2  -3.23452   CTGTGCTACTGATGC                 GGCA AGT TGTC                 TTAGCTTGTCGCCAT  46 195
CXD84_RS08050 1627752 .. 1627781 +  -6.5  -3.16055   GCCTGTATTGATGCC       TGATTCCCGAATC TATT GATTCCAGAATCA        TTCATCCAGGATTTG  51 30
CXD84_RS08055 1630032 .. 1630057 +  -6.1  -4.24002   TGGCGGGTGGCGGCA         TG-CATGTGCCG GGC CGGCGCATGGCC         TTTTGCGGTTTGCGG  70 260
        rpoD NONE
CXD84_RS08070 1632864 .. 1632889 + -16.9  -5.14626   TACCAAGTAAACATG         CGGGTCTCGGA GCAA TCCGAGGCCCG          TTTTGTTTTGGTGGT 100 36
CXD84_RS08080 1634641 .. 1634657 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD84_RS08095 1636346 .. 1636387 +  -6.3  -3.02511   CATGCAGTGGGTGCG CCAGCA-GTCGCCGGCCGGC TGA GCCGGCGCGCGCCGTTCAGG TCTTGAGGCGGTAGC  49 4
CXD84_RS08165 1647274 .. 1647286 +  -3.3  -2.52516   TGCCGCACCGCCTCC                AGCAG CGC CTGCA                ATTCGTCCTCGGCAA  39 62
        bioF NONE
CXD84_RS08180 NONE
        bioD NONE
CXD84_RS08190 1652656 .. 1652666 +  -8.2  -3.53444   GGTCACCGCGCCCGT                 GGCC ATG GGCC                 TTTCCGAAACCCTGG  62 446
CXD84_RS08215 1657774 .. 1657788 +  -5.6  -3.78934   CTGGTGAGCTACAGC               GCCAAG GCC CTGGGC               TTCTTCTAACCCGGG  60 2
CXD84_RS08230 1661034 .. 1661044 +  -8.2  -3.33162   TGGTCAACGTGGCGT                 CGGC ATT GCCG                 TTCTCGAATACGCTG  59 280
CXD84_RS08240 1663026 .. 1663042 +  -9.3  -2.75481   TGCTCCTGGGTGGCA              GGGGCCC CGC GGCCCCC              TGGTTGGAATTGGCA  55 392
CXD84_RS08250 1664365 .. 1664391 + -13.6   -3.7795   TGGATTCGCCGCGCT         TGGCCGCGAGCG CCG CGCCGGCGGCCA         TTTGCTGGGCTTTGG  82 280
CXD84_RS08260 1665377 .. 1665404 + -17.8  -3.02144   TCGCGCAGCGTGGTT        TCGCGGTAGGCGC GCA GCGCC-ACCGCGA        TGTTGGCGACGGTAA  82 361
CXD84_RS08270 NONE
CXD84_RS08275 1667103 .. 1667116 +  -4.5  -3.02144   CGCCGCGGCGCTGCA               GGTCG GTGA TGACC                TCTTCGAGCGCCTGC  46 208
CXD84_RS08295 1671471 .. 1671481 +  -3.2  -2.78816   GTAGCTGGGCGGGTC                 GTAC ACC GTGC                 TGTCGTAGGGGCTGG  40 329
CXD84_RS08325 1676450 .. 1676465 +  -3.2  -2.52516   CAGCGGATATTGATC              GCCG CCATCGCC CGGC               CTTGCTGGTCGACGC  39 120
CXD84_RS08345 NONE
CXD84_RS08350 1680369 .. 1680397 + -10.2  -3.52073   TTTCGGCCACCATCA        GCCGGTGCGCCT CGTGC AGGCGCAGCTGC        TTCTGGTATTGCAGC  65 177
CXD84_RS08380 1686506 .. 1686530 +  -2.7  -4.07568   CCGTACCAGCGGGCA          CGGCATTGCGG CGG CTGCAACACTG          TTTTGCGCCGGCGCC  59 49
CXD84_RS08385 1687781 .. 1687827 +  -9.6  -3.68222   GGTCGCCGCCGGCCA GTTGC-CG-G-GCCAGGTCGCGCG CCA CGT-CGACCTGGCGCGCGTGCGAC TTGTTCGAATTGGCG  68 224
CXD84_RS08400 1690679 .. 1690720 + -14.3  -3.19513   GGGACAGGCAAGCAA TTGGCGGGTGCCAGTCCCC CTGT GGGGACAGGCACCCGGGGG  TTAGGTTGCCGTTCT  73 126
CXD84_RS08410 1692579 .. 1692589 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS08425 1695002 .. 1695030 +  -8.1  -4.10552   GCCGGCGTGCCGTTG        TCCGGCTTGGC CGCCTGT GCCATGTCGGA        TTTGCTTTAGTGGAA  69 395
CXD84_RS08435 NONE
CXD84_RS08440 NONE
CXD84_RS08445 NONE
CXD84_RS08450 1698663 .. 1698673 +  -2.4  -2.94416   ACCCATCGCGCTCGT                 CGAC CTT GGCG                 TCTGTCATGAACATC  41 40
CXD84_RS08455 NONE
CXD84_RS08460 NONE
CXD84_RS08465 1700998 .. 1701025 + -10.6   -4.2535   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT  89 104
CXD84_RS08500 1706298 .. 1706332 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS08535 NONE
CXD84_RS08540 1715627 .. 1715676 +  -5.6  -3.29144   GTTCGATCACAATAC TCG-GCGCGGCTTGACACCGGGCCG CGC CGGCCCGCGG--GGGCCGCGCACAA TTATCAACACCATCC  51 12
CXD84_RS08545 NONE
CXD84_RS08550 1717981 .. 1717997 +  -3.6  -3.14344   GCGCCGGCCACGCGC              TCGGGC GCCAG GCCCCA              TTCGTGCAGCACCTC  45 102
CXD84_RS08585 NONE
CXD84_RS08590 1725276 .. 1725288 +  -3.3  -3.65046   GGCCGCGCTGATCGC                CATCG CCC CGCTG                TTCTTCCCCTCCGGC  53 82
CXD84_RS08600 1727292 .. 1727346 + -12.1  -3.01712   AAAGCCGGGCCGCCG GCCA-GCAT-GGCCGCCGCCGTGGTGG CGC CCATCAAGGCCGCGGCCGACACGTGGC TGTTGCCCGCCAGCC  66 277
        queF 1730467 .. 1730493 +  -7.9  -2.52464   CAATAGCCGCGTTCA         GCGCGGTGCGG CGCGC CTGCATCGCGA         TCCATTGCGCCAGCA  49 35
CXD84_RS08680 1746566 .. 1746605 + -11.3  -3.28712   GCTGACCGCCTGGCG  CTGCCCGCCCGACAGCA GGCCGA TGCGGTCGGCCAGGCGG   TTCTCCAGCCCCAGG  66 387
CXD84_RS08770 1765622 .. 1765641 +  -3.4  -2.82595   ACAGGTCCTGAGGTG            GCTTACGG CTTG CCGCACGC             GTTTCGGTGGTTCAA  41 175
CXD84_RS08775 NONE
        rpmG 1766351 .. 1766372 + -18.7  -4.86731   GCGCGCCATGGTGAA           CGGCCCCGC CAGG GCGGGGCCG            TTTTATTTGGCAAGG 100 68
CXD84_RS08800 1770169 .. 1770199 + -22.6  -3.85698   CGTCTCAGGTCAAAC       CGCAGAGCCCGCCG CAC CGGCGGGCTCTTCG       TTTATGCGGCGGCGA 100 49
CXD84_RS08805 NONE
CXD84_RS08810 1771999 .. 1772039 +  -2.4  -5.00884   TCCTATAATCGATGG T-TTTGACCGCCCGCGCCC TGCC GGGCGCGGTCCGTTACCTA  TTTTTTCGCACGAGT  79 45
CXD84_RS08815 NONE
CXD84_RS08820 NONE
CXD84_RS08825 NONE
CXD84_RS08830 NONE
CXD84_RS08835 1778299 .. 1778309 +  -2.4  -3.01712   TATCGGCGCCCGCCG                 CCAG GCA CAGG                 TCTTCCCGGAAACGC  41 104
CXD84_RS08845 NONE
CXD84_RS08850 NONE
CXD84_RS08855 1781873 .. 1781897 + -13.6  -4.09685   CCCCCAAAAACAAAA         CCCCGCGAGCC GTGA GGCT-GCGGGG          TTTTGAGCAATAAAA  85 355
CXD84_RS08890 1789660 .. 1789678 +  -8.1  -3.20348   ACCTTCGCCATCTGG             GTGCTGC TGTTC GCAGCGC             TTGCCTATTACTCGC  54 285
CXD84_RS08905 NONE
CXD84_RS08910 1793966 .. 1793979 +  -5.9  -2.87931   ACCGTCAGCCGCGTC               CTGGC CCGC GCCGG                TCTGTCGCACCTGGC  48 330
CXD84_RS08940 1798230 .. 1798250 +  -4.7  -3.62046   AGCTCGCCGGCCTCG           CC-GGCCA GCGCCA TGGCCAGG            TTCTTGGGCGAATGG  54 285
        acnB 1801800 .. 1801819 + -16.4  -4.91852   TTCGGCCATGACAAA            GGCCCGCC GCAA GGCGGGCC             TTTCTTTTTGCTGCG 100 48
CXD84_RS08960 NONE
CXD84_RS08965 1803080 .. 1803090 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD84_RS08970 1804216 .. 1804228 +  -4.8  -4.07568   GGTCAGGCTGCCAGC                CTGG TAGTC CCAG                TTTTCAGGCGCCCCC  63 147
CXD84_RS08990 1808234 .. 1808254 +  -3.8  -4.09864   GAGCACGTCGGCCCG            GCGCCCGC CTCGC GCGGGAAC            TTTTGACGCATCGAT  61 108
        acnA 1811128 .. 1811151 + -19.6  -5.26875   CCTGCGCGACCCGAA          CCCTCCGGCC TGCT GGCCGGAGGG           TTTTTTCGTTGGACG 100 59
CXD84_RS09005 1813357 .. 1813377 +    -4  -3.79687   GTTCCACTGACCGGA           TC-GCGCCGC CAT GCG-CGCCGA           TATTTTCTGCCGCGT  57 31
        earP 1814514 .. 1814530 +  -2.2  -2.64274   TGCTTTGCCCGGATC              GGCC GGTGCTCAA GGCC              TCACTTTGACAGCCT  38 60
         efp 1815210 .. 1815229 + -16.4  -5.75342   CAGGCGCAACCGAAA            CGGGCCGC ATGC GCGGCCCG             TTTTTTTTGCCCCGG 100 56
CXD84_RS09120 1835379 .. 1835391 +  -5.5   -3.2614   TCTTGAAAAAAGCTG                GCACG GTT TGTGC                TTGGTATGGGGCATC  51 256
CXD84_RS09140 1838579 .. 1838632 +  -8.8  -2.82623   ACTTCGTCAACGATT GACGGTTGGCA--CGGTGCCTGTCCC CACG GGGACAGGCACCGCATCCCCGCCTAC TCGTTCTCCGCCCCG  54 24
CXD84_RS09180 1849857 .. 1849899 + -10.5  -3.40403   TAGTAGCGCGACAGC GCGCGTGA-GCACGCCGCGC GCAT GGGCGGCCTGCATCACCTGC TTGTCGTCCAGCCCC  65 171
CXD84_RS09190 1852627 .. 1852670 +   -34  -3.06815   TTGTTTGGATCGTTC GACGCGGGATGGGGGCGCCC CCAT GGGCGCCACCATCCCGCGTC TGTATTGAGGAGGAT 100 41
CXD84_RS09195 1854182 .. 1854205 +   -21  -5.47399   CCCGCGGGCAAGCAA          GGCCGGCGCC TTCG GGCGCCGGCC           TTTTTTTCGCCTTGC 100 47
CXD84_RS09200 1855271 .. 1855301 +  -5.4  -2.71712   CCCTAGGGCACGACC      TCGGCCAGCACCT CGTCGC AGG-GCCGGCTGA       CTTTCAGGGCGAGCA  45 107
CXD84_RS09255 1869857 .. 1869871 +  -5.6  -2.78384   CCACCCGCAAGCGCG               CCGGCA GGC TGCGGG               TGTAGTCGCCCAGCC  43 485
CXD84_RS09295 NONE
CXD84_RS09300 1879885 .. 1879924 +   -15  -3.15544   GCTGACCGTGTGGAC GGCGGCC-G-CCGCGCCG GCGCTG CGGCGCGAACTGGCCGCC  TTGCTGGACCTGCCG  76 483
        pgaA NONE
        pgaB NONE
        pgaC NONE
CXD84_RS09365 1895432 .. 1895446 +  -5.6   -4.1891   CGCCACCAGGTCGGC               CTGCCC GCT GGACAG               TTTCTGTTCGGCCAG  66 180
CXD84_RS09380 NONE
CXD84_RS09385 NONE
CXD84_RS09390 1898229 .. 1898239 +  -2.4  -2.54523   GAAAACCCACCTCCA                 GGGG TAA CCCA                 TGCATTCCAGTCTGC  38 19
CXD84_RS09395 NONE
CXD84_RS09400 NONE
CXD84_RS09405 NONE
CXD84_RS09410 NONE
CXD84_RS09415 1903841 .. 1903868 + -18.6  -3.11687   GACAGGCGCAAAAAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTCGGTACTGCTTGC  90 189
CXD84_RS09450 1910799 .. 1910814 +  -3.2  -4.07568   TTCCACCGGGGTATC              GGGC CGCAACTC GCCC               TTTTCGACCGCGCGG  60 198
CXD84_RS09505 1919900 .. 1919921 + -14.5  -4.93696   GCCGCAAAAGAAAAA           GGCCCTTGA TTGC TCAAGGGCC            TTTTTGATCTTTGGC 100 209
CXD84_RS09545 NONE
CXD84_RS09550 1928288 .. 1928298 +  -2.4  -3.06796   CGTGATCATCGAAAA                 GGCC GAA GTCC                 TTGAATAAGCTGGCG  41 7
CXD84_RS09555 1929254 .. 1929279 + -19.1  -4.55798   CCGCGCCGGGAAAAA         GAGCCTGTCCC CGTC GGGACAGGCTC          TTTTCATTTGGCGTA 100 204
CXD84_RS09575 1933612 .. 1933641 + -22.3  -2.62616   CCACTCCGGCGGCCA       GTGTGCCTGTCCC CGCC GGGACAGGCACAC        TGCTGTACGCCATCG 100 87
CXD84_RS09585 1935849 .. 1935865 +  -5.7  -3.09803   CGCGCACATTGACCA              CCGTGCC GTT GTCGCGG              TATTCGCTGGCCTTG  48 194
CXD84_RS09600 1938877 .. 1938909 +  -8.5  -3.61715   ATCGCCCCGGCCTCG    CCGCCCGCCA-G-GCC GAAC GGCGCATGGCGG-CGG     TTGTTCGACAGGATG  63 184
CXD84_RS09620 NONE
CXD84_RS09625 NONE
CXD84_RS09630 1946399 .. 1946410 +  -7.2  -3.27923   GCGCTGGTGGCCAGC                GGCC TGGT GGCC                 TTGCTGCTGTTCACC  54 111
CXD84_RS09640 NONE
CXD84_RS09645 1949658 .. 1949677 +  -2.7  -3.58343   CACCAACGTCATCGG            CTGCGCC ATCTTC GCCGCGG             TTTCCGGCTCGTCGG  49 332
CXD84_RS09690 NONE
CXD84_RS09695 1973654 .. 1973671 +  -3.4  -3.73775   CGGCCCGGTGCAGCC             GCC-GCA GGCTA TGCAGGC             TTTGCTGGCCATAGG  55 419
CXD84_RS09745 1980701 .. 1980713 +  -3.3  -3.13371   CGCTATTTTTATTCG                CCGGG CGC TTCGG                TATATTAGTGGCCTG  44 76
CXD84_RS09750 1981594 .. 1981609 +  -7.5  -3.39895   CCTGGGCCCGCTTGC              GCCGG CGGTTT CCGGC               TTCGTTCCTCCCGAC  59 133
CXD84_RS09755 NONE
CXD84_RS09760 NONE
CXD84_RS09765 NONE
CXD84_RS09770 NONE
CXD84_RS09775 NONE
CXD84_RS09780 1988290 .. 1988310 + -10.4  -2.70932   CTCGACGCCATGGTG           GCGC-GCGC CAAC GCGCCGCGC            TGATTCACCCCGCCC  57 2
CXD84_RS09850 2002031 .. 2002041 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS09855 NONE
CXD84_RS09880 2009477 .. 2009507 +  -5.2  -3.14602   TCGCAGCAGGTCAAG       GCGCGCCTGCTCCC CTA GGGAGCGCGTCCGG       TCTTGGTCGACTAGA  49 8
CXD84_RS09900 NONE
CXD84_RS09905 NONE
CXD84_RS09910 NONE
CXD84_RS09915 2018129 .. 2018139 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS09920 2019320 .. 2019334 +  -8.5  -3.35813   TGCCTGGAATAAGGG               GCCGC TCGGC GCGGC               TTCGTTAACCTCGAC  59 202
CXD84_RS09945 2024748 .. 2024761 +  -8.1  -3.06261   CGACCTGCGCCGCCA               GCTCG GCTT CGAGC                TGTTCCGCGTTCGCG  52 279
CXD84_RS09955 NONE
         alr NONE
CXD84_RS09970 NONE
CXD84_RS09975 2032521 .. 2032536 +    -6  -3.53811   CGCAGCATGCGGTCC              GCGGCG GTCT CGCCGG               TTTCCACCACGTAAC  56 158
CXD84_RS09990 2034662 .. 2034695 +  -2.3  -3.60792   GTAGTCCCCATACGT     CGCGTCGTAAGTTTT ACGG AAGACGTTCAGCGCG      TTGTATCTGAATGCT  48 37
CXD84_RS09995 2035850 .. 2035860 +  -2.4  -4.07568   CACCACCGCCAGCGT                 GCTG ATG CTGC                 TTTTCCGAACCCGGG  58 448
CXD84_RS10105 NONE
        sycN NONE
CXD84_RS10115 NONE
CXD84_RS10120 NONE
CXD84_RS10125 NONE
CXD84_RS10130 NONE
CXD84_RS10135 NONE
CXD84_RS10140 2057462 .. 2057483 + -12.9  -3.01712   TCGCCGCCGACCTAG           ACGCCGCGC GTCA GCGCGGCGA            TATTCGGGGCCGAGG  70 65
CXD84_RS10150 2059693 .. 2059705 +  -4.1  -3.55444   AGGCGGTCGCCCGAG                TCGAG GTC TTCGA                TTTCCACGGTCGCGC  51 511
CXD84_RS10160 2062744 .. 2062784 +  -3.2  -3.28712   CGTAGCGGTCCAGGT CCT-GTCCG-GTCATGGCGG CGA CCGCCTTCACGTGGCCCAGG TTCTCGGCCACCAGG  47 523
CXD84_RS10170 2064031 .. 2064055 + -11.4  -3.14344   TGGCGCAGCGGCTGG         CGGCGCG-CTG AAGC CGGCCGCGCCG          TTGATGGCGCGCATC  66 15
CXD84_RS10175 2065630 .. 2065664 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS10210 NONE
CXD84_RS10215 2073750 .. 2073766 + -15.1  -3.05384   GGCTGCGCCGAGACG              GCCGGCG TGG CGCCGGC              TTCGGTCGGCAGGCC  74 475
        htpX 2076134 .. 2076153 + -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 52
CXD84_RS10245 NONE
CXD84_RS10250 NONE
CXD84_RS10260 NONE
CXD84_RS10265 2084373 .. 2084428 +  -5.5  -2.82623   GGTTGGACGCCACCA CCACATCGAACCAGTCCGGGTGCTGCAC GAA GTGC-GCGCACAGGATG-T-CGATGTGG TACTTGTCCCAGCGC  44 400
CXD84_RS10280 NONE
CXD84_RS10285 NONE
CXD84_RS10290 NONE
CXD84_RS10295 2092495 .. 2092529 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        gabT NONE
CXD84_RS10310 NONE
CXD84_RS10315 NONE
CXD84_RS10320 NONE
CXD84_RS10325 NONE
CXD84_RS10330 2099837 .. 2099893 +  -3.7  -3.53012   GGCGCGTCACCATGC CGGTGAC-CGGCTCGCCGCGCAGGA AGGCGCGGA TCTTG-GCCGCCAGCTGCGCCACCG TTTCGCGGCGCAGGC  49 65
CXD84_RS10340 2102720 .. 2102736 +  -2.1  -3.17051   TATCATGCCTATCAG              GCCCGAT TGC ACCGCGC              TGTTGCTGGTGCCGG  43 498
CXD84_RS10355 2106110 .. 2106128 + -17.4  -3.55622   AGCGCAATAACCGTC             CGGGCGGC CAT GCCGCCCG             TTTCCCGGCCTTGCC  89 31
        purD NONE
CXD84_RS10365 NONE
        nadD 2109058 .. 2109070 + -10.5  -3.93489   TCCGCCACATCGACA                CCCGC GCC GCGGG                TTATATTTATCGTTA  77 60
        rsfS NONE
        rlmH NONE
CXD84_RS10385 2111035 .. 2111065 +  -7.5  -2.73364   GATACGGCGCCCGCC      GCGCAGCAACGCGC CCAG GC-CGTGGCTGCGG       TGCTTGGCATCGACC  49 472
CXD84_RS10420 NONE
CXD84_RS10425 NONE
CXD84_RS10430 2122302 .. 2122321 +  -7.8  -3.67597   ATCTAGCGCATCGGG            CCCGGCATG CAG CG-GCCGGG            TTCTTCAATAGCGCC  63 35
CXD84_RS10445 2125626 .. 2125646 + -15.4  -2.57132   CAGGCGCTGGCGCTG            GCCGCCCG ACAGG CGGGCGGC            ATTCTGGCCCACCGG  69 298
CXD84_RS10455 NONE
CXD84_RS10460 NONE
CXD84_RS10465 2129291 .. 2129329 + -19.7  -3.01712   AGCTGACATCCGCGG  C-GAGGTGTGCCTGTCCC CACT GGGACAGGCACACCGCAG   TGTTGACGGGCGCCG 100 84
CXD84_RS10480 2133628 .. 2133667 +    -2  -3.44527   CTCGCGTAGCGGCGC GGGCAGGCT-GCCCGCGG CAGCCA CCA-GGTCGAGCCAGCCC  TTGTCGTAATCGGTG  47 463
        lpxO 2141507 .. 2141542 + -20.4  -2.53015   TGGCACTCTAACCAC    CCGGGTGCCTGTCCCC GCGG GGGGACTGGCACCCGC     TGACTTGGCGCCTGT  95 30
CXD84_RS10520 2147047 .. 2147101 + -13.5  -3.04322   TGGTTTTCATCAAGA AGCTGTAACCAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTAAA-ATGGCC TGTTCGCAACTTACC  70 18
CXD84_RS10525 2147428 .. 2147443 + -11.8  -4.90266   TTCGCCTCATCGCAA              CCGGCC GGCA GGCCGG               TTTTTCATTGATGCC 100 53
CXD84_RS10530 2149431 .. 2149453 + -12.6  -3.61715   TCTCGATGGCTTCTT           CGCCGCGCGC CAG GCGCTCGGTG           TTCTTGACCCCGGTG  74 122
CXD84_RS10555 2155409 .. 2155463 +  -7.2  -3.39327   ATTGAGCGAATCGCC GCCGCGCGCGTAGTACATGTAGAC CACGCCCCC GTC--CATGAACAACGCGCGCCGC TTGTGGGTGTAGCCG  55 480
CXD84_RS10605 NONE
CXD84_RS10610 2165517 .. 2165527 +  -3.2  -2.63631   TCCCTTCGAGCAACC                 TGGG CTA TCCA                 TCATGTCGCAGTTGA  39 53
CXD84_RS10615 2166842 .. 2166852 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS10620 2167876 .. 2167911 + -14.7  -2.70932   TCTAGTGCATCTCAG   CGCGGCGG-GCAGGCGG CCCG CCGCG-GCGCCGCCGCG    TCGTTCCCGCCCACC  72 45
CXD84_RS10665 2176197 .. 2176218 + -14.4  -4.07885   CCGGCATTGCCGCCA           CGGGCCCG CGCAGA CGGGCCCG            TTTTGCAGGACCGTC  85 42
CXD84_RS10675 NONE
        acnD NONE
        prpF NONE
CXD84_RS10690 NONE
CXD84_RS10695 2184527 .. 2184540 +  -3.9  -3.53012   TCACGCTGGTTGTCG               TCAAA CCCT TTTGA                TTTCCGCGCCAGCGA  51 12
CXD84_RS10700 2185975 .. 2185986 +  -7.2  -3.28712   AAGCGCCGGCCCGCG                CGCC ACGC GGCG                 TTGTAAAAGCGCCGC  54 39
CXD84_RS10705 2186428 .. 2186446 +  -7.4  -5.75342   AAGCCCCTTTTAAGA             CCCGCT CTAAACC AGCGGG             TTTTTTTTGGCCGGG 100 96
CXD84_RS10715 2187971 .. 2187991 +  -8.3  -3.09492   AATAACCCTTATACG            TCCCCGT TAGGGAT ACGGGGA            TGTTGCAGTTCACGG  56 39
CXD84_RS10720 NONE
CXD84_RS10725 NONE
        hslO NONE
CXD84_RS10735 2192509 .. 2192525 +  -7.9  -2.84325   ACAGGCCGGACTTGT              CCACGCC GAA GGCCTGG              TCGTATTTGCCGGGC  52 449
CXD84_RS10755 2195999 .. 2196032 + -27.5  -3.16742   CGGAAGACAGCGGTT     TCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGA      TTACTGACCATTAAC 100 487
CXD84_RS10850 2216426 .. 2216472 + -16.5  -5.00884   CGGCATGTAAGCGCG GGCGCGCACGTGGGCGCC-GGCA GGA TACCAGGCGCCCTCGCG-GCGCC TTTTTTCCAGACCGT 100 31
CXD84_RS10855 NONE
CXD84_RS10860 NONE
CXD84_RS10865 2219154 .. 2219172 +  -8.8  -3.45849   GATGCCGTCCAGGCC             CGCGGC CAGCCGC GCCGCG             TTGTCGTGGTCTAGC  61 273
CXD84_RS10900 2227746 .. 2227763 + -14.1  -4.41494   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 61
CXD84_RS10910 2229415 .. 2229444 +  -8.5  -3.05596   GACAGTTCACAACTA       GCCGTTCA-GGCCG GCC CGGCCCTGCACCGC       TTCGCTGACCACCTG  55 25
CXD84_RS10930 NONE
CXD84_RS10940 NONE
CXD84_RS10945 2237442 .. 2237469 + -18.4  -2.71924   CATGACCTGAGCCGC        GCGGGCGAGGCC TGAC GGACTCGCCCGC         CTTTCCGGGAGGCTG  87 11
CXD84_RS10950 2237805 .. 2237824 +  -2.7  -3.63266   ATGCGCAACGTACGG            CCCGGCT GAACAG GGCCCGG             TTTCCGATGGATTTT  53 17
CXD84_RS10955 2238647 .. 2238665 + -14.6  -5.78622   CTGCGCAGCGAAAAA             GGCTTGCC AAC GGCAAGCC             TTTTTTTTCGCCTCC 100 50
CXD84_RS10960 2239756 .. 2239778 +  -5.5  -3.83026   AGGCGGCCAACCCAT          GACCCGCACC AGCC GG-GCGGATC           TTTCATGTGCCGCGG  60 24
CXD84_RS10965 2240869 .. 2240879 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 171
CXD84_RS10975 2243079 .. 2243126 +  -7.4  -3.64822   GGTTGGCGATGCCCA CGCCGTGGCCGGCCAGCGCCAG TTGG CAGACGGTGGACGAATACGGCG TTTCGATGGCGGCGT  60 228
         maf NONE
CXD84_RS11080 NONE
CXD84_RS11085 2262048 .. 2262093 + -13.1  -2.71712   TGACGGAGAAGCACC AGGCCG-CGCGCGACATGGTGC TGC GCGCCCTGCCGCGCGGCGGCGG CTTTCGCGAAGACGA  67 217
CXD84_RS11180 2282498 .. 2282554 + -11.5  -3.65812   AGGTCCGGCGCACGC GCCCGGCCTG-AG-GCGGCCGG-ACGCC GCGC GGCTTGCCGCCCGGGCTACTGGCCGGGC TTCTGTTCGGCAGCC  75 15
        mobA NONE
CXD84_RS11245 NONE
        mobB 2296131 .. 2296143 +  -3.3  -4.36914   GGCGGCGCATTGCCG                TCGGC CGC GCCCA                TTTTCTGCCACAGCG  67 162
CXD84_RS11280 NONE
CXD84_RS11285 NONE
CXD84_RS11290 NONE
CXD84_RS11295 2305369 .. 2305393 + -11.3  -3.57792   ACCACCCGCACGCCG          GCCTGCGCCAG CTC CAGCCGCAGGC          TTTCGCAATACGTCG  70 398
         tal 2311649 .. 2311659 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS11325 2312933 .. 2312946 +  -4.5  -3.28924   CCAGCGCCGCCTGCA               CCG-GC TGG GCGCGG               TTGTGCACCGAGATG  49 295
        smpB 2319726 .. 2319739 +  -5.9  -2.71364   CGCGATTCCTGATGC               GGTCG CGGC CGGCC                TGCTTGGCCGCGTAC  47 29
CXD84_RS11385 2323153 .. 2323174 +  -8.6  -4.56597   GTTGACGTCGGCGTT           GCGCGCGG CGTTGA CCTCGCGC            TTTTTCAGCACGCCG  83 258
CXD84_RS11395 2324250 .. 2324270 +   -14  -4.77036   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 52
CXD84_RS11405 2327909 .. 2327919 +  -2.4  -3.16492   GCGGCAGCACTGCCT                 CCAG GTC CAGG                 TGTTCGTGGATATGC  43 291
         map 2344797 .. 2344814 +  -5.5  -2.87132   GGCCTTCGTGACACG             GCCGG TCGAAATC CCGGC              TCTCTGACCCCCGCC  46 1
CXD84_RS11495 2347843 .. 2347858 +  -7.5  -3.30124   GTTCACGCCCGAGAT              GGCGC AGGCGC GCGCC               TTCTACCCGCTCACC  56 420
CXD84_RS11505 2348722 .. 2348778 + -31.9  -2.71364   GGCGTTGCGGCGCAA CGCCTGA-CGGC-C-GCGCGGCCGGCTT GCGC AAGCCGGCCGCGCCGCGCCGGTCAGGCG TCGTTGGCCGCGTAG 100 19
CXD84_RS11530 2353749 .. 2353761 +  -3.3  -4.57569   CCTTTACCCGGCCAA                TAGGC GGC GCCAA                TTTTTGACAGAATCG  71 117
CXD84_RS11535 NONE
        fliS 2355596 .. 2355621 +  -3.1  -4.82901   CACCCTGCGCCTGCC         GTTCCGGCCTG AAAC CAGGAAGGCAC          TTTTTGTCCAGCCGC  75 14
CXD84_RS11545 2356013 .. 2356031 +  -2.2  -2.64099   GCACATGAGTGTCGG             CCCGCCCG CCC TGGGCAGC             ATTCTGGTGCAGCGG  38 33
CXD84_RS11555 NONE
CXD84_RS11560 NONE
CXD84_RS11565 NONE
CXD84_RS11570 2358255 .. 2358304 + -11.4  -3.53444   CGGCCCAGGCGCCAG TTCG-GCCTCGGTG-GCGCCGCCGC TTT GCG-CGGCGCGCACCACGGCGCGCA TTTGCGACAGCATGC  69 276
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 2364069 .. 2364120 +  -4.4  -3.30441   CGCCCTGACGCCTGC GCCGGG-TCC-GGCCGCGCAAGGCGGC CCG GCCGCC--GC-CGGCAAGGGTCCCAGC TTCTCGCAAGTGCTG  49 96
CXD84_RS11610 2366433 .. 2366450 + -10.5  -2.52464   TTTCGCCCTGTTTTT             CGCCTGC CAGC GCGGGCG              TGAATTGCGGCAGAA  56 308
        fliL NONE
        fliM NONE
        fliN 2368591 .. 2368605 +  -5.6  -3.14564   ACCGCTTGAACAGTC               GCCGCT AAA AGCCGC               TTCATGACCGAATCC  49 18
        fliO NONE
CXD84_RS11640 2369728 .. 2369740 +  -3.3  -2.58544   ACCTGCTGCTCGGCT                CGCTG GCC CAGAG                CTTCTACCAATAGCG  39 0
CXD84_RS11645 2370047 .. 2370062 +  -5.4  -2.78712   TGTCCTGAACGCGCC              TGGCCGC GCC GCG-CCA              TGATTGCGTTCACCA  45 33
        fliR 2370978 .. 2370996 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 153
        flgA 2389247 .. 2389262 +  -5.4  -2.79004   CCCCCATCGGGCCGG              TC-CCGC GCA GCGGAGA              ATATTTTGAAGATCC  45 131
        flgM NONE
CXD84_RS11740 2390124 .. 2390140 +  -9.3  -3.01712   CATCAAGGCCGCGGG              CGCCAGC CGC GCGGGCG              TCTTGCGCGCGCCCG  57 91
CXD84_RS11760 2397117 .. 2397171 +  -7.7  -5.35365   CTGGGGCGCTGGCAA GTAGAAGTCAGCGGGAGCCAGTCCCC GTTC GGGGACAGGCTCCCGG-GTATATTGC TTTTTCTTATGTTTT 100 102
CXD84_RS11765 NONE
CXD84_RS11770 NONE
CXD84_RS11775 2399624 .. 2399634 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS11780 2400617 .. 2400656 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD84_RS11785 2401811 .. 2401842 +  -5.7  -3.30214   CCGGGGCCTGGATGC      CGGCGCGGGCCGCC TGCCT GG-GGATGGCGCCG      TTGATGTAGTCGATT  52 149
        leuD NONE
CXD84_RS11815 2408510 .. 2408520 +  -8.2  -2.57132   AGCGCCACCAGCGCC                 GGCG CCG CGCC                 CTTGTAGGCCACCGC  51 446
CXD84_RS11845 2415493 .. 2415503 +  -2.4  -3.68351   GCCGATATTGAGGAT                 GGCC AGC GGCG                 TTTCGATCATGGCCC  53 513
CXD84_RS11860 NONE
CXD84_RS11865 2421232 .. 2421264 +  -5.4   -3.4072   GCCGCGTACTCGCCC     TGCAGCCGGGCGCCC AGGC GGGCGGTCAGC-GCG      TTGTCGTCGCGGATG  52 281
CXD84_RS11890 NONE
        clsB 2427538 .. 2427584 +  -9.8  -3.19602   ACACCGCCGGCGCCG CCTGGGCGCCTGGCTGGCCGGC ATC GTCGGCCTGGCCGTCGTCGGGG TATTGCTGTACCAGG  62 60
CXD84_RS11915 NONE
CXD84_RS11920 NONE
CXD84_RS11925 2431736 .. 2431758 +  -8.3  -2.87132   CGCCGCTCGTGAGCC           CCGCGGCGC CCGCC GCGCTGCGC           TATGTGGACGACAGC  54 29
        treS NONE
        glgB NONE
        glgX NONE
        treZ 2445122 .. 2445173 + -10.5  -3.04144   ACCGCCGACACCCTG GCGCGCTGGCGCGCCCGGCCTCC CGCCAT GCTGACCGCGCGCGCCGGCGGGA TGTTGCGCGTGCCCG  60 188
        treY 2449013 .. 2449052 + -15.6  -3.14132   AATGATGCGCAGGGC  CGGCCGCAGCGCCCGCGCG GCC TGCGCCAGCGC-GTGGCCG  TTCATGCCGGGCAGC  78 169
        ptsJ 2455019 .. 2455035 +  -4.3  -3.09908   ACATCAACCAGGCGA              CTTCCCA TAA TGGGGCG              GTTATTTTCCGAACG  47 55
CXD84_RS11990 2455695 .. 2455705 +  -5.4  -3.03798   CTGCCCATCGGCCGG                 GTGA GCC TCAC                 ATTCTTTCTCGCCCT  47 186
CXD84_RS11995 NONE
CXD84_RS12000 NONE
CXD84_RS12005 2457915 .. 2457936 +  -9.4  -3.01712   CCGCACCGCCGCCTG           GGCCGCGCC ATGGC GGC-CGGCC           TGTTCCACCGACAGG  57 396
CXD84_RS12020 2459537 .. 2459559 + -20.6  -5.41746   GCCGCGCCGCGATCG           CAGGGCCGCC TCG GGCGGCCCTG           TTTTTTTGGACGCTT 100 51
CXD84_RS12025 2460372 .. 2460394 + -10.5  -3.34398   GTGACCGCGCCCAAT           TCGACGGCG GCGCG CGCCGGCGA           TGTTTCCGCGCCGCG  63 273
CXD84_RS12030 NONE
CXD84_RS12035 2461877 .. 2461899 +  -3.3  -3.24747   GGCATCGGCCCGCCT           CGCCGGG CCCTGCCCA CCCGGAG           TTCATCATGTCACGC  46 89
CXD84_RS12040 2462823 .. 2462873 +  -5.6  -3.42996   ATGGTGGGCTCGATG CCCGCGTCGCGCAGCAT-TTGCAGCA CGT TGC-GCGACGTGCTGCA--ACGCGGG TTGTGGTAGATGGTG  52 403
CXD84_RS12065 2467710 .. 2467723 +  -2.3  -2.62184   TCCGGGCGCGCGTCC               GCTCG ACCT CAAGC                TGGTCTGACGCGCAC  38 4
CXD84_RS12070 NONE
CXD84_RS12075 NONE
CXD84_RS12080 NONE
CXD84_RS12085 2469871 .. 2469883 +  -2.6  -2.78384   GCGGTGGCCGTGGTC                GTGC AGAGG GCGC                TGTCATGAACCGCAC  38 5
CXD84_RS12090 2470640 .. 2470656 +  -4.4  -3.10641   AAAATTCTCCAGCCC             CGAGTGG ACCG CC-CTCG              TTCCCTGATGCCTTC  47 1
CXD84_RS12095 2471536 .. 2471574 + -10.4  -3.53012   GCGCCGGCGGCGGGC  GCCGCCGAACAACGCGGC GCAAG GCC-CGTTGTTCG-CGCC  TTTGCCGCGCGCCGG  67 41
CXD84_RS12100 2472173 .. 2472185 +  -4.7  -3.02739   TGTCGCCACGGACGC                CGCGC GCG GCCCG                TCTGTATCCGTTCCC  45 82
         psd 2473167 .. 2473223 +  -2.2  -2.74192   TTCGCTTTATCGATA CATGAGGGCTTGCTAGATTGCGGC CTGGCCATC GCCGCCGTTTCTGGAGCTCTCATG TCGTCTTCCGCACTG  38 56
CXD84_RS12110 2474801 .. 2474833 +  -5.6  -4.31837   CGGGTCGTTGGGCAC     GGCGATG--GTCGCGC CCT GCGGGATGGCATCGCC     TTTCTTCAGTTTCTT  69 461
CXD84_RS12130 2477041 .. 2477098 + -12.5   -3.3514   GCCATGCCCGTCGTG CTGGCGCTGACCGCGT-CGCTGGGCGGG CAG CGCGCCCTGCGCACGCAGTATCCGCTAG TTGTGAACTGTCAAT  73 193
CXD84_RS12150 2480387 .. 2480420 +  -4.5  -3.84451   TTGCCGCAGCGGCCA     TGGACGAGTTGCTCGG AGC CC-AGTGTCTCGACCA     TTTCGATTTCGGCGG  60 296
CXD84_RS12175 2485631 .. 2485651 +  -5.3  -2.53263   CGCCGGTCGCGCGAG            CTGGCCGAG GAG TTCGGCCGA            TGAGTTCGGCGTCGC  44 2
CXD84_RS12180 2486310 .. 2486320 +  -3.2  -3.53811   CAATTCACGGCGTCA                 TGTG TCA CGCA                 TTTCGACGGGGTCCC  49 103
CXD84_RS12185 NONE
CXD84_RS12190 NONE
CXD84_RS12195 2488714 .. 2488750 +   -13  -2.71791   TCAACGTACGCCCAG    GTTTCCGGCTCCGG GTCGCACTA CCGGAGCCGGAGCC    ATTTGGAGCACGAGT  67 72
        livH NONE
        livM NONE
CXD84_RS12210 NONE
CXD84_RS12215 2492642 .. 2492652 +  -8.2  -3.60098   AGCACCACGGCATCG                 GCGC CGC GCGC                 TTTCAGGTGGGCGAT  63 267
CXD84_RS12230 2494769 .. 2494807 +  -4.4  -3.53012   CGGCGCTGCACACCA   GTTGGCCTGCCACGATGT AGA ACATCGTGGTCAGCATGC   TTTCGCCGCGGCCGA  52 338
CXD84_RS12240 NONE
        trxA 2502951 .. 2502992 +  -2.1  -4.06864   CCGCGCATTCCCCCC TGATTCCCGC-GCGGGCC CGTCCGT GGCCCGCCGCCCGAACCC TTCTTCTTATCTCCC  58 66
         rho 2504308 .. 2504325 + -14.1  -4.54727   CACGCCCGTCCCGAC             CCCCGGC CCGC GCCGGGG              TTTTGCTTTGCGGGC 100 54
CXD84_RS12280 2510891 .. 2510903 +  -4.7  -4.09243   TAACGGTTTTTCCCC                GCTGC AAA GCCGC                TTTTCACGCCATGTC  62 38
CXD84_RS12285 2511739 .. 2511751 +  -6.2  -4.11501   ATATTCACCGCCAAC                CCGC CGCGC GCGG                TTTCCTTGTATTTGG  69 191
CXD84_RS12295 2515087 .. 2515126 + -11.5  -3.05384   GATACACCACGATGC GCGATGCCTG-GGC-GGGCG CGC CGCCCTGCTGCAGGCG-CGC TTCCATGGCCCGCAC  62 181
CXD84_RS12315 2520259 .. 2520292 +  -5.2  -3.14963   CACGGCGCCGGCCAG     GCCCTAGACTGCCA CGCAAT TCGCAGTCCAGCGC      TTCACTCGTTATGCC  49 133
CXD84_RS12320 NONE
CXD84_RS12325 2521496 .. 2521506 +  -4.6  -4.07568   GAGGCGGCCGGCACG                 TGCG TTA CGCG                 TTTTCGCGCGAAGCG  62 92
CXD84_RS12370 2533091 .. 2533114 + -11.7   -4.8622   CAAATCGTTGATCAA          GGCCTGGCA CATCGC TGCCGGGCC           TTTTTCATTGGCGCG 100 39
CXD84_RS12380 2535747 .. 2535763 +  -5.7  -2.64472   TGATGCGCAGGATGC              CGCGGTC ATA GGCCGCC              TGGATTTCCGACATC  45 268
CXD84_RS12390 2537364 .. 2537374 +  -5.4  -5.69473   TGCACGTCCCCCATT                 TCTC ATC GAGA                 TTTTTTTCTGATATC 100 300
CXD84_RS12400 2537538 .. 2537559 + -17.3   -4.8622   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 34
CXD84_RS12420 2540491 .. 2540505 +  -4.2  -2.73124   CCGGGCAGTTCGTTA               GACTAG GAG CCAGTC               ATTTCAACCCTAAAC  41 71
        kynB NONE
        kynA 2542170 .. 2542206 +  -3.5  -3.40403   CGTGCGCCGGGCTGC    TTGCCCGGCCTGGCTGG CGA CCCGCTAACCTGGGAAA    TTATCATGAAAGAAG  49 152
CXD84_RS12435 2542511 .. 2542526 + -10.4  -5.86061   GAGGCGCACCAGAAA              GCAGCC TGCG GGCTGC               TTTTTTTTCCTCGCG 100 58
CXD84_RS12440 NONE
CXD84_RS12445 2545855 .. 2545872 +  -6.9   -3.9777   GTGGGCACCGTGATG             CGCGCCG CTCT TGGCGTG              TTTCTCGCTCTTGGC  66 147
CXD84_RS12465 2550172 .. 2550188 +  -9.3  -2.73364   TGGCCGCCAGCCTGG              GCACGCC GGC GGCGCGC              TGATTACGGTGACGG  55 6
CXD84_RS12470 2551013 .. 2551047 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS12480 2552857 .. 2552889 +   -17  -3.01791   ACTCGGCCAGTTCCA     GCGCCCAGGTGCGGG TGCA CCCG-ACCAGGGCGC      TCTTGGCGGCCGAAT  82 290
        hpnC NONE
        hpnD NONE
CXD84_RS12505 2558178 .. 2558190 +  -4.7  -2.93073   GAAGACTCCTCAGGC                CGGCG TCG CGACG                TGGTTCTTGAGCCGG  44 450
CXD84_RS12530 2561304 .. 2561314 +  -3.2  -3.45366   TCATCCCGGTCGTGC                 TGGC ACT GCTA                 TTCATTCATTGACCG  48 3
CXD84_RS12535 NONE
CXD84_RS12540 NONE
CXD84_RS12545 NONE
CXD84_RS12550 2565253 .. 2565281 +  -6.6  -3.28712   CCGTGGCCGGATCGC       GCACGGCCTGGGC GAAC GCCTGGGCCA-GC        TTGTCGCGCACCGCG  52 184
CXD84_RS12565 2569100 .. 2569112 +  -4.7  -2.72344   ATGGACAATCTCCCC                GGCCG CAG CCGCC                TGCTTGCACATCCCG  43 499
CXD84_RS12585 2572281 .. 2572305 + -13.6  -3.30771   CCCTACGGCCAGTTC         GGTGCGGC-CG CCAT CGAGCCGCACC          TTGTGCCGGATGTCG  74 251
CXD84_RS12615 NONE
CXD84_RS12620 2582827 .. 2582858 +  -2.7  -3.14931   CGAACCGCCAGCCCT      GCGGGCGGACCTC TACCTC GTGGCCCGCCGGA       TTCATGCGGGCTGCC  43 364
CXD84_RS12655 2586282 .. 2586305 +   -16  -3.21416   TGCCGCCTCGGGATG          GCGC-GCGCGC CAG GCGCGCAGCGC          TTCCTGGTAGCGCTC  80 66
CXD84_RS12675 NONE
CXD84_RS12680 2589891 .. 2589918 +   -14  -4.56597   CTGAGCGCAACCCGA        TCGGCGGCGGGC CCGC GCCCGCCGCGGC         TTTTTCGACAACCAA 100 37
CXD84_RS12685 2590802 .. 2590841 + -11.5   -2.9162   CCTTGGCGCGCCATC CTGCCGCGGCGTGCGCC CCCACCAA GGCGC-CGCCGTG-CAG  TCGTTTCCGGAGTTC  63 69
CXD84_RS12690 NONE
CXD84_RS12695 NONE
CXD84_RS12700 2593030 .. 2593062 +  -5.3   -2.9296   CCGCGGCGCCATGAA      CCGGCGCATGGCGGC GGC GCCGTGGGGCGATGG      TATGGTTGGGCTTTC  46 65
CXD84_RS12705 2594313 .. 2594360 + -14.1  -3.61517   GCACCGCGGCCGCCT TGCGC-GGCC-ATGGCGCGCGCG CCCG CGCGTGCGCCGGCGGCCCGTGCG TTATTCGACACAGGT  78 300
CXD84_RS12710 2595275 .. 2595289 +    -7  -2.85668   GGATGCCTTGGCAAC               GAGCCG GCG CGGCGC               TATGGTATGCGGATA  50 53
        bamD 2606511 .. 2606539 + -21.1  -4.08064   ACTCGCGCAGTCCAA        GGAAAGCCCGGCC CCA GGCCGGGTTTTCC        TTTTGCGCGGCCGTT 100 45
CXD84_RS12780 2611175 .. 2611211 + -27.4  -2.71364   AAGCGCTGATCGCAA   CGCAGGCGCCGC-CCCG TCAT CGGGTGCGGCGCCTGCG    TCGTTGCCCCGATCC 100 32
CXD84_RS12805 NONE
CXD84_RS12810 2615909 .. 2615919 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 91
CXD84_RS12815 2616902 .. 2616941 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD84_RS12820 2618007 .. 2618017 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS12825 2619507 .. 2619525 +  -8.9  -3.28924   GGTATCGATCTGGCC             GGAAAGC AGCGC GCTTTCC             TTGTCGGCCACCGTG  59 511
CXD84_RS12835 2621117 .. 2621134 +  -2.5  -3.58343   ACACGACCGAGCCGG             CCAGCGC CTGG GCGCGGA              TTTCGCGATGCTCGA  50 376
        mdeB 2634527 .. 2634564 + -20.6  -3.06796   CCTGGCAGTCGTGAC   GGCCGCATCGGCCGGG ACGTGG CCCGGCCGATGCCGTC    TTCGCTGCGGTGCAG 100 27
CXD84_RS12880 2637113 .. 2637130 +    -4  -3.04144   GGCTCCATAACTCTT             CTGGCG CCAAGA CGCCCG              TGTTACCCATGCAAA  44 176
CXD84_RS12885 2637797 .. 2637807 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS12895 2639149 .. 2639179 +  -6.8  -3.65046   GCGCTTGGTCAGGAA      GCGCATGCGCCGG TCGATT TC-GCGCAGGCGC       TTCTTGCCGTACAGG  57 363
CXD84_RS12955 NONE
        recJ 2658732 .. 2658743 +  -7.2  -3.65812   GAGCACGCCGCCTGA                GGGC CGCC GCCC                 TTCTGTTACAAACCG  61 26
CXD84_RS12965 NONE
CXD84_RS12970 NONE
        lysS 2662415 .. 2662430 +  -3.2  -3.95022   TGCTGGCCCTGGCCG              GCGC ACTGCTCA GCGC               TTTCCTGTTGGTGAC  58 190
CXD84_RS13025 2674020 .. 2674038 +    -8  -3.53012   GCCAGCATCTGCCGC             GTGACGGC ATC GCCGCCGC             TTTGCAGCAAGGAGG  58 170
CXD84_RS13045 2677923 .. 2677943 +  -2.5  -3.31144   GCCCCGGGAGGAACA            TCATGTTGA AAG TCAGCGAGA            TTCTGCGCGTCAAGG  44 60
CXD84_RS13050 2678432 .. 2678442 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 74
CXD84_RS13065 NONE
CXD84_RS13070 2682775 .. 2682785 +  -4.6  -3.30124   GCCAGGCGTTCGGCC                 CGCT GAT GGCG                 TTCTGCGCGATAGCG  49 374
CXD84_RS13095 2685612 .. 2685627 +  -4.6  -2.57132   CAACTTGTAACGGTT              GGCTGG CCAT CCACCC               CTTATCCAGCGGCGC  42 53
CXD84_RS13100 2687705 .. 2687721 +  -2.2   -2.8372   TACGGCGGCCGCGGT              CTGAGC CTGCT GCTAAG              GTTTCATGGCAAATA  40 22
        folP NONE
CXD84_RS13110 2689947 .. 2689966 + -16.4  -5.06414   CCGGACCTGCCCGAA            GGCCCGCC TGAT GGCGGGCC             TTTTTGTTGCGCGGG 100 48
CXD84_RS13115 2691068 .. 2691095 + -21.4  -3.48276   CCGACGGGGTGCTGG        GGTGCCTGTCCC CGCG GGGACAGGCACC         TTGTATCGGGGCAGG 100 154
        ppk1 2694998 .. 2695017 +   -15  -5.09259   CGGCCCGCTGCCGCC            TGGCCGCC CGCG GGCGGCCA             TTTTATTTTGAAATA 100 43
        pstS 2696258 .. 2696279 + -10.1  -2.52464   CCTGGCCGGACCAGT           GAACGGCGA GCGA TCGCCGTCC            TGACTTCGCGGGGCG  56 68
        pstC NONE
        pstA NONE
        pstB 2699050 .. 2699084 +  -7.7  -3.49858   CGGAAGACTACATCA    CCGGCCGCTTCGGCTG AGGC CGGCCGGCG-GGCCGA     TTCTGGTATAGTTGC  60 9
CXD84_RS13150 2699277 .. 2699317 + -11.2  -3.86346   TAGCCGCTCCATGCA TGTCAAAGCCCCGATACGG ATTT CCG-GTCGGGGCTTTCGCG  TTTCTGCGGGCGTGC  77 119
CXD84_RS13155 2700363 .. 2700402 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD84_RS13160 2701512 .. 2701550 +  -3.8  -3.32844   TCGGGGTCGGGGTGC  CGCCCGGCGTGCTCG ATGACATAGG CGAACAC-CCGGCCG   TTCTCGCGTGCGAAC  47 104
CXD84_RS13185 2707916 .. 2707926 +  -8.2  -3.53091   CATCAGCCCTTGCGC                 GCCC ACC GGGC                 TTTCGGCAAACGGGT  61 336
CXD84_RS13200 NONE
        cobA 2713954 .. 2713994 + -14.7  -3.32498   TGCCCAGGCCCAGTT CGGCG-CGCGTGCCGCGC AGTTCG GTGCGGTGCGCGATGCCG  TTGGTGTGTACCGTA  78 220
        queA NONE
CXD84_RS13255 2722691 .. 2722717 + -12.3  -2.70932   GCGCGGGGTCGACTA        GGGCCG-GCC-CC CCC GGCGGCGCGGCCC        TCGTTGCGCCGCGCC  65 25
        yajC 2723191 .. 2723209 + -17.4  -3.65046   TGTAAGGTCACACAA             GGCCCCGC GTG GCGGGGCC             TTGTTCCGCTCACCC  91 36
        secD 2725156 .. 2725181 +  -2.5     -3.37   CCCTGCCGCCCGCCG         TCC-TGATACGC AAG GCGAAACATGGA         ATTTTTCCGGATTCA  46 54
        secF 2726135 .. 2726164 + -22.2  -5.81412   CCCGGTAGTAAAAAA       CCCTGCCCGGCC AAATGC GGCCGGGCAGGG        TTTTTTTTACATGCA 100 48
CXD84_RS13275 2727839 .. 2727862 +    -8  -3.61398   CGTCGTCAAGCAGCA          CTTCGGGGCG CGCG CGCCACGACG           TTCTTGAGCACCCAG  60 403
        miaB NONE
CXD84_RS13290 NONE
        ybeY 2731326 .. 2731361 +  -5.3  -3.31905   GCGCCGCGCAGATTG    GC-GCCAATGCGCCCC AAATC GGGGAACAATGGCCGC    TGTTGTATGCAAAAT  51 43
CXD84_RS13300 NONE
CXD84_RS13305 2734391 .. 2734430 +    -5  -3.53444   TAGACGATGACGCCG GTGTCGTGG-CTTGC-GC ACCAGG GCAGCAGGTCCGCGGCGC  TTTCGCGGCGGATGG  52 440
CXD84_RS13315 NONE
CXD84_RS13320 2735492 .. 2735505 +  -8.1  -2.80398   GGTGTAGAAGTTACG               CCGCT GCGG AGCGG                TAGTTCAGTTGGTTA  51 54
CXD84_RS13325 2735590 .. 2735611 + -14.5   -5.7946   AAAAAATTCCGAAAA           GCCAGTTGC GTAA GCAACTGGC            TTTTTTTCTTCCCGG 100 40
CXD84_RS13330 2737037 .. 2737056 +  -4.8  -3.28712   GCGAATTGGCTTCGT            CGCGGCGC TCCT GCGGCACG             TTGTCCAGCAGCACC  49 235
CXD84_RS13415 2751313 .. 2751347 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 493
CXD84_RS13425 2752586 .. 2752598 +  -4.7  -2.90496   GCCCAGCCGTCCGCC                GCAGC ACC GCCGC                TGATTTCCCGCGGGC  44 10
CXD84_RS13430 2753001 .. 2753028 + -11.2  -2.75074   GCCCCGATGAAGATG        GCCGGATCGACG CGCG CGTCGTTCAGGC         TGATGTTCCAGTGCA  59 70
CXD84_RS13450 2756628 .. 2756657 + -11.3  -2.87132   GTTGCCCACCAGCCG       GGCGGCCACGGCGG TGA CCACCA-GGCCGCC       TATGTAGGCGCCGCG  61 124
CXD84_RS13470 NONE
CXD84_RS13475 2760241 .. 2760251 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 238
CXD84_RS13480 2761457 .. 2761474 +    -4  -3.60805   CCGCGCGCCACGCCG             GCGGGC AGGACG GCCCGG              TTTGCGCTACGCTGT  51 44
CXD84_RS13485 2762206 .. 2762227 +  -8.1  -3.64599   GGCGCCCCGGTCACA           CGAATGTTGC ACC GCAACA-TCG           TTTGCGGTGTAATAG  63 48
CXD84_RS13490 NONE
CXD84_RS13495 NONE
CXD84_RS13500 NONE
        fabI 2768052 .. 2768063 +  -7.2  -3.33483   GGAATCGGCACCTCG                GCGC CGCG GCGC                 TTCATGATTTCGATC  55 470
CXD84_RS13525 2772982 .. 2772992 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS13530 2773975 .. 2774014 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD84_RS13535 2775052 .. 2775065 +  -3.1   -4.2074   CACAACTAGCTGCCC               GGTTT GAAG AAGCC                TTTCTCTCTTGGGAG  63 32
CXD84_RS13540 2776317 .. 2776343 +   -13  -4.65895   CCATGGCAGTACGTA        CGCCCGGCCGC CTCACC GCG-CCGGGCG         TTTTTGCGTCCGGCG 100 79
CXD84_RS13560 NONE
CXD84_RS13565 NONE
        folD NONE
CXD84_RS13575 2788380 .. 2788415 +   -19  -2.59431   TGCAAGCCTGACCTC    TCAGGTGCCTGTCCCC GCAG GGGGACTGGCACCTGC     TGACTTCTGGACGCC  87 30
CXD84_RS13580 2789183 .. 2789200 + -14.1    -3.965   ACCCAATGATCCGGA             CCGCGCC CCAG GGCGCGG              TTGTTGCTTTTGCGC  84 32
CXD84_RS13585 2789592 .. 2789622 + -25.6  -4.07568   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 44
CXD84_RS13605 2796079 .. 2796108 +  -4.3   -4.1822   CACCACCCGCAGCCC       CACCAG-TTCGC ACATGCG GCGAATCTGGCG       TTTCTTGCCCTCGCG  63 182
CXD84_RS13615 2797321 .. 2797349 + -10.2  -4.07885   CGCTGGCGCGCGCGC       CCGTCGCGCCGCG CTGA CGCCGC-CGGCGG        TTTTGACGCAGAATC  78 9
CXD84_RS13625 2800071 .. 2800087 +  -2.2  -4.42238   CGTCCGACAGGGTGA              CCTCGA CGCTC TCGATG              TTTTCCTTCAACTGC  68 234
CXD84_RS13645 2804058 .. 2804078 +  -8.1  -3.01712   CCTGGTGTTGAAGCC            GGCGGGCCC CGA GGCCCCGGC            TCTTCGCGGACCACG  53 438
        mltB 2819700 .. 2819712 +  -4.7  -3.57144   AGATCTTCGGCATGT                AGGCC TCG GGCCA                TTTGCGGATGCCCGG  54 322
CXD84_RS13800 2836949 .. 2836969 + -18.3   -5.4505   GCCGCTACAATGAGG            GGGCCTCGC ATA GCGAGGCCC            TTTTTTCTTGCCGCG 100 52
        ubiG NONE
CXD84_RS13810 2838481 .. 2838503 +  -2.7  -2.77899   GCGGGCCCCATGCCC          GT-GCCGG CGCCACAC CCGGCCAC           TGATTGCTCCACCCA  40 59
CXD84_RS13815 NONE
        ssrA 2840305 .. 2840327 + -13.6  -5.85178   CAAGTATTTACCTAA           TAGCCAACTT CAA AAGTTGGCTA           TTTTTTTTGGCTGTT 100 57
CXD84_RS13825 2840572 .. 2840600 +  -6.9  -3.02471   GCGGGGCAAAATAGT        TTGTTAATGTGTA CTA TACACATTAAAAG        TGTGTATAGTACACA  51 19
CXD84_RS13830 2840803 .. 2840829 +  -7.9  -2.84298   GGTTTGAAGTGAGAC         ACAAGCCCCGA AGCAA TCGGGGCCTGC         TAGTTGTGAACTGTC  52 29
CXD84_RS13845 2842331 .. 2842368 + -11.3   -3.6682   TCCGACGCACCCAGC   AGAGAGCCCCGA-CTGGA CAA TCCGTATCGGGGCTCTCG   TTTGCGTGGGTAGCA  73 55
CXD84_RS13855 2844754 .. 2844788 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS13865 2846761 .. 2846771 +  -8.2  -2.80622   CCGCGATTTCCGGCC                 GCGC GCC GCGC                 TATGATCGACTATCT  52 10
        moaA 2848231 .. 2848241 +  -4.6  -3.05384   TCCTCGCGGCTGTCC                 TGGC GTG GCCG                 TTCGGTGCGCAGCGG  46 372
CXD84_RS13900 NONE
CXD84_RS13905 2855453 .. 2855471 + -13.8  -3.05463   TCGGCCAGCACGGCC             TGGCGGCG TAG CGCCGCCG             TTCAGTCGGCGGGCT  72 15
CXD84_RS13915 2856642 .. 2856657 +  -4.6  -3.14404   CGCCGCCACCATGCT              GGCCCA GGCC TGAGCC               TTACGTAGTTGCTGT  47 13
CXD84_RS13920 2858164 .. 2858199 + -13.2  -3.00298   AGCGACTGCCGCGGC    AAAGGGAGCCTGTCCC CGCT GGGACAGGCTCCCGGG     TATGTAGTTACCACG  70 57
CXD84_RS13935 NONE
CXD84_RS13940 2861812 .. 2861830 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 297
        cadR 2865827 .. 2865837 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS13960 2866945 .. 2866959 +  -2.7  -3.57144   CTTGCTCGGTCATGT               AGGCC GACAG GGCCA               TTTCCAGCTGCAGGG  50 129
CXD84_RS14000 2875036 .. 2875070 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS14020 2879146 .. 2879156 +  -6.8  -3.40878   CGCGCTGTCGGGCAC                 GCTC ACC GAGC                 TCTTGTTCGCCTCGT  56 335
CXD84_RS14040 2885491 .. 2885511 +  -8.1  -2.62263   GATCGTGCAGCATCT            CGCGGGCCG GGC CGGACAGCG            TGATCTCGCCCGACT  48 139
CXD84_RS14115 2909909 .. 2909929 + -15.4  -5.13343   GTCGTTATTATTTGA            GGCGGGGC TGCAT GCCCCGCC            TTTTATTTTGCATTG 100 92
CXD84_RS14120 2910511 .. 2910526 + -10.4  -4.62069   CCAGAACGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTGCCATGCCGG  93 81
CXD84_RS14150 NONE
CXD84_RS14155 NONE
CXD84_RS14160 2918910 .. 2918936 +   -15  -3.60865   ACCCTGACCCGGCCG         CGCCGGCGCCGC CCC GCGCAGCCGGCG         TTCTGCTTTAGAATC  81 34
CXD84_RS14165 NONE
CXD84_RS14170 2920002 .. 2920018 +  -2.1  -2.64099   AAACAAACCCATCAG              GAGCCCC CAT GCGTCTC              ATTCTGCTCGGACCG  38 108
CXD84_RS14175 2920672 .. 2920730 + -13.8  -3.39895   GCAGAGCTAAACCGC GCCGCG-AGGCCGCCGCGCCGCCCGCGCA GGGG TGCGCGGCCG-CGCG-CGCCCTGCCCGCC TTCATTGCTAGCCAA  77 31
CXD84_RS14180 2921527 .. 2921555 + -18.2  -2.84602   AGTAATCCCTCCCCC        CGACGTGCCGGC TCGAT GCCGGCACGTTG        CTTTGGTACCCTGGC  86 36
        murJ 2923183 .. 2923215 +   -12  -4.20516   AATAGTGAAAATCAC      AACAAAGACCGGCC CTTAC GGCCGGTCTTTGCA      TTTATTGGATCGACA  91 65
CXD84_RS14190 2924397 .. 2924420 +  -6.8  -3.58037   GGGCTTGCAATCCCC          GTCGGAC-TTG ATA CAATGTCTGAC          TTTGCCGAATTCATA  58 74
CXD84_RS14195 2924756 .. 2924773 + -11.3  -5.45802   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC 100 69
CXD84_RS14245 NONE
CXD84_RS14250 2936265 .. 2936277 +  -3.3  -3.07233   AAGCCGCCAAGAGCA                TCGGC TAA GCCTA                TATTGCCCATTGTCA  42 18
CXD84_RS14255 2938050 .. 2938069 + -13.6  -5.40072   CCACCCATGCCGGAA            GAAGGCCC TGCG GGGCCTTC             TTTTTTTGCCCGGCG 100 44
        pdxA NONE
CXD84_RS14265 2940595 .. 2940625 + -11.1  -3.06183   CCAGCTGCCCGCACT      G-GCGCGCCAGGCGC CGC GCG-CGGGCGCGCAC      TTCCATCGAGCTGAG  62 459
CXD84_RS14325 2950490 .. 2950508 +  -5.8  -3.14931   CCTTGCCCGGGCCCG             GCGCTGCC ATC GGCCACGC             TTGCTAACGCCTCGA  49 98
CXD84_RS14330 NONE
CXD84_RS14335 2953063 .. 2953097 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS14360 2958427 .. 2958445 +   -11  -3.55444   ATTTCGCCCATGCGG             CGCTCGAT CAG GTCGAGCG             TTTCCAGCGTGAAGG  71 424
CXD84_RS14370 2961157 .. 2961191 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS14395 2967495 .. 2967536 + -26.8  -3.54903   GGCGCGTTCCCTTCC GACCCGATGCGTCGCCGGC CCGTT GCCGGC-ACGCATCGGGTC TTATCCATTTTATAT 100 62
CXD84_RS14400 NONE
CXD84_RS14405 2969320 .. 2969335 +  -3.3  -4.28548   GCATGTCGCACCGCT              GAATC CCGCAC GATTC               TTTTCATCACTCCGT  63 24
CXD84_RS14410 2970209 .. 2970234 + -20.5  -4.56597   CCGGGCCTGCATCCC         GCCAAGCCGCC CTCG GGCGGCTTGGC          TTTTTCACCCGGCCG 100 68
CXD84_RS14415 2970404 .. 2970449 +   -28  -5.84381   AGGCCAGCAACAAGG CCAGCAAGAAAAAAGCCGCT CATGGA AGCGGCTTTTTTCTTGCTGG TTTTTTTCTTGCTGG 100 58
CXD84_RS14420 2971641 .. 2971653 +  -3.3  -4.11216   ACCTATTGACAGTTC                ACAGC TAA GCTGG                TTTTCCGAGTCGCGC  59 18
CXD84_RS14425 2972854 .. 2972871 +  -5.5  -3.29144   CTGGCCGACGCCACG             CGACTCT ACGA AGAGGCG              TTCTGACGCCGCTGG  51 2
CXD84_RS14465 NONE
CXD84_RS14470 NONE
CXD84_RS14475 NONE
CXD84_RS14480 NONE
CXD84_RS14485 NONE
CXD84_RS14490 2982832 .. 2982871 +  -6.5  -3.17075   GATGCGCAAGGCGCA GG-CGTGCGATGGCCTGTA TTCG TAC-GGCCATGTCACGGCC  TTGCCTTACGAGCCG  51 275
CXD84_RS14500 2984879 .. 2984889 +  -5.4  -3.25823   CGTTTTCCGAGCTGG                 CTTC CAT GAAG                 TTCATATAGACAGGC  51 6
CXD84_RS14505 NONE
CXD84_RS14510 2986982 .. 2987008 + -10.9  -4.52857   GGCCGCGACGGCTGG        CGCGCCAGGACG AGGC TGTCCTGGC-CG         TTTTCTATGACACGT  95 46
        soxR NONE
CXD84_RS14525 2988661 .. 2988686 +  -5.4  -3.34398   CGTAAGGCAGTATTG         CCGGCTGTATC CCGAT GGTGC-GCCGG         TCTTTGCGCCCGCGC  51 57
CXD84_RS14530 2991048 .. 2991082 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS14545 2993512 .. 2993528 +  -4.3  -3.14132   GACAGGCAGCAATCG              CCGGGCT GTT AGCTCAG              TTGGTAGAGCAGCGG  47 140
CXD84_RS14550 2993600 .. 2993629 + -17.3   -5.0925   CACCATGATTTGTAA       GGCCGTTAGTGAT AGTA GTCACTAACGGCC        TTTTTGCTTTTCGGC 100 36
CXD84_RS14595 NONE
CXD84_RS14600 3000483 .. 3000499 +  -5.8  -3.05596   GAATACGTGATCAGC             GGCGCGG CCGG CC-CGCC              TTCGCTCAGGGCATG  48 332
        panB 3002272 .. 3002287 +  -3.2  -4.07568   TCCTGCAAACCCGCT              CCC-GCG CGC CGTAGGG              TTTTCGCCACAGGCA  59 253
CXD84_RS14615 3003897 .. 3003931 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 256
CXD84_RS14645 3009813 .. 3009832 +   -10  -3.33261   GCACGCTGGCGATGG            CGTCGGCGG CCA CCGCC-ACG            TTGTCGCGGTTCAGG  63 72
CXD84_RS14675 NONE
CXD84_RS14680 NONE
CXD84_RS14685 3018558 .. 3018578 +  -8.9  -3.46602   TTGTACCGAGTAACC            TTGCGCGGG CCG CCTGCGCCA            TTGTGATGTCCACGG  60 84
CXD84_RS14695 NONE
CXD84_RS14700 3021484 .. 3021506 +  -6.9  -3.35679   AGGCATCGACCAGCA           GGCCCTGGT AACGC GCCACGGCC           TTGTGCGTCACGCCG  52 304
CXD84_RS14710 NONE
CXD84_RS14715 3024661 .. 3024683 +  -5.4   -3.7941   ACGAGCTGACGTCGT           GCAGGTCGGC GAT GCGGATCAGC           TTCTTGTAGACCGTG  58 115
CXD84_RS14730 3027544 .. 3027574 +  -6.8  -3.39784   TGGCGCACCAGGCTG      GGGCCGAGCGTGC CGGGAT GC-TGCTCGGCCA       TGTTCTTCAGGCTCC  55 431
        gcvA 3032051 .. 3032093 + -10.5  -3.56092   GGCAGCGTGAGCGCC GCGGCGGCCTGCGCGATGGT CATG GCCACCAT-CAGGTCGCCGC TTTGCGCGATGCTCC  67 412
CXD84_RS14770 3035151 .. 3035189 +  -9.6  -3.14132   CGGATCGGCGATGCC G-CCGACCGCGCGCACCGG CATG CCGGTGCG-GCGG-CGCAC  TTGCTCGGCCAGGCC  59 213
CXD84_RS14780 NONE
CXD84_RS14825 3044401 .. 3044433 +  -3.4  -2.78463   CCACTTCGGCCGGCT     CCATCAGCCGGTC GAACGGCA GGCCG-CTGAGGG      TCTCCTGCCAGCGGT  40 172
CXD84_RS14875 NONE
CXD84_RS14880 3052959 .. 3052969 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 64
CXD84_RS14885 3054111 .. 3054131 +  -2.4  -2.59267   GCCCAGCGTCGAGAT            CAGCACGA CGTAA TCGGGCAG            CTTGGTGTCCTTGCC  38 163
CXD84_RS14900 NONE
CXD84_RS14905 3057477 .. 3057492 + -10.4  -5.86332   ACGAACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTGCCTTGC 100 58
CXD84_RS14920 3060221 .. 3060240 +   -15   -4.8622   GCGTGCAATGAAAAA            GGCGGCTC GCAT GAGCCGCC             TTTTTCATTGCCGGC 100 49
CXD84_RS14940 NONE
CXD84_RS14945 3065408 .. 3065436 + -14.6  -5.40072   GCCCGCCATGCAGCC       GCCCCGTTGGACG ACCA CG-CCAGCGGGGC        TTTTTTTCGCCGGCC 100 78
CXD84_RS14950 3066934 .. 3066962 +  -5.2  -3.36569   GCGCACCATGGGCGT       CGTCG-CCGTCGC CCTG GCGGCGGTCAATG        TATTTGGCGGCTTCC  53 231
CXD84_RS14960 3068790 .. 3068802 +  -4.7  -3.55622   TCCAGGCTCCAGGCA                TCGGC CTC GCCGC                TTTCCAGCAGTTCCC  54 334
CXD84_RS14970 3071908 .. 3071918 +  -6.8  -3.31144   CCTATTACGCCACGG                 CGAC GGT GTCG                 TTCTGACCATGGCGA  54 9
CXD84_RS14975 3073302 .. 3073318 +    -5  -3.15544   ACTCCTTCACCATGG              CGCCGC AACCC GAGGCG              TTCATGACGATGGCC  47 489
CXD84_RS15000 3091536 .. 3091573 + -16.4  -3.61398   GCGAGGCGGCCTTGA   TGGCATCGACGGCGAT CTTCAC ATTGCCGTCGGTGCCG    TTCTTGAAACCGACA  85 523
CXD84_RS15020 3095211 .. 3095232 + -18.7  -5.06414   TTCGTCCCGGAATGC           CGGCGCGCC TCAA GGCGCGCCG            TTTTTATTGCGCCAC 100 49
CXD84_RS15050 3099450 .. 3099466 +  -5.7   -3.4277   GCTGGTACATGAACC              CGTGGTC CTT GGCCTCG              TTGTAGGTCTTGCCT  55 128
        chrA 3102263 .. 3102284 +  -3.6  -4.11216   CGGATCGTCGTAGAC           GACGC-GCC ATACC GGCAGCGGC           TTTTCCACGTGGCCC  63 280
CXD84_RS15085 NONE
CXD84_RS15090 NONE
CXD84_RS15095 NONE
CXD84_RS15100 3109295 .. 3109314 +  -2.8  -3.23216   TTCAGCGTCGTCGAC            GCCAT-GCC CGA GGCTATGCC            TTGCTCGTGGTGCGC  46 280
CXD84_RS15110 3111026 .. 3111047 + -18.7  -3.28712   CGCCACAAACGACAA           CCCCCCGGG CAAG CCCGGGGGG            TTGTCGGCGAACCAA  93 70
CXD84_RS15165 3122394 .. 3122405 +  -5.8  -3.01712   GGGTACGGAAGCGGC                TGGC GATG GCCA                 TCTTGGCGCGCGGCC  48 303
CXD84_RS15175 3124702 .. 3124712 +  -4.6   -4.0371   AGGTCCACCATGGCC                 GGCG CCG TGCC                 TTTGTATGGAACATG  63 455
CXD84_RS15195 3127227 .. 3127237 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 81
CXD84_RS15200 3128357 .. 3128385 +  -5.3  -3.87373   GCACATTTGGACAAT       TCATTGCGCCCG CCATGA TGGGCGC-ATGG        TTTATCCGCGCTGTC  60 141
CXD84_RS15210 3130603 .. 3130617 +  -3.5  -3.72576   GCGCGCAGGGCCGCT               TCGAC CTGAT GTCGG               TTTGCTCGGGCGCGC  54 348
CXD84_RS15240 3136559 .. 3136573 +  -3.5  -3.94746   GAATGTGCCGGAGGG              CGC-GC ACGC GCAGCG               TTTGCTTGAATCTCA  59 63
CXD84_RS15245 NONE
CXD84_RS15250 3139411 .. 3139425 +  -4.2  -3.14931   GTCGAGCACGGTGTC               GTCGTC GTT GACCAC               TTCATCGAACGTGAA  45 266
CXD84_RS15290 NONE
CXD84_RS15295 3147120 .. 3147131 +  -5.8  -3.78022   CTTCAGTAGCGGTCC                CAGG CCTT CCTG                 TTTCATCCCTCTACC  60 183
CXD84_RS15305 NONE
CXD84_RS15310 NONE
CXD84_RS15315 3150716 .. 3150731 +  -8.2  -3.53444   AGCCGCCGCGCCTCG              GCGTGG ATAT CCGCGC               TTTCGAACGCGGTGA  61 167
CXD84_RS15340 NONE
CXD84_RS15345 3156203 .. 3156239 +  -5.1  -3.02144   CGTCATCAGTGTCAG    CATCGGCCGGTTGGT CGACAGC ACCAGCCCGTCTATG    TATTCCAGCCCCTGC  46 127
CXD84_RS15355 3160300 .. 3160328 +  -4.4   -3.2614   AGGCCACCGCGGTGC       CGCG-CGCGGCCG GCAC CATCTGCGTCGCG        TTGGTCTGCAAGGTG  47 226
CXD84_RS15380 3166168 .. 3166203 +   -24  -3.73224   ATTCAGAGCGATCAC    TTCGGCGGGCGCGCCT TGCA GGGCGCGCCCGCCGCA     TTTGGTAACAACTAA 100 47
CXD84_RS15385 NONE
CXD84_RS15390 3170713 .. 3170764 + -18.2  -2.83677   AGGCCGCCTATCGGC GCCATTTGAAATGGCTCGCGCCGAC GAG GTTG-CGGGGGCCATATCAAATGGC TGTGCTGAATTCATT  86 141
CXD84_RS15395 3171474 .. 3171496 + -20.6  -4.65895   TTAGCAGCACCTTAA           GCCGCCTGGC TCC GCCAGGCGGC           TTTTTCCGTCCCGCG 100 57
CXD84_RS15400 3172421 .. 3172458 + -12.5  -2.64155   GCAGCACGGCGCAGG   CGCCGCCCGCCACGCCC GGCA GGGCATGCAGGGCCGCG    TCGATTTCCGCCAGC  62 290
         mpl NONE
CXD84_RS15475 3185320 .. 3185335 +  -2.4  -2.64354   GGGGCGCTCCTGACG              CCGCCG CGCC CGATGG               ATTCTCACTATGTAC  38 72
CXD84_RS15480 3187264 .. 3187283 +  -2.7  -2.76468   CGCCCTAAAATGCAC            GGGTGCG ACGCTC CGCTTCC             TCCTCTTCGATCCTG  40 61
CXD84_RS15485 NONE
CXD84_RS15490 3189060 .. 3189070 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS15495 3190053 .. 3190092 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD84_RS15500 NONE
CXD84_RS15505 3192029 .. 3192052 +  -5.2  -3.28712   CAGCATCCGCCACGG          TCCAGGCC GAACACCA GGCCCGGA           TTGTCGGGCGAGCCG  49 374
CXD84_RS15530 3196045 .. 3196066 +  -9.3   -4.1891   GTCGCTCAGGCGCTT           GTCGCCGGC CACC GCCAGCGGC            TTTATCTTGCCGGCC  75 332
CXD84_RS15555 3202372 .. 3202400 +  -8.7  -3.51032   GCGGCTTGCCCAGCA        GATACAGGTCGCC GAT GGCGTCCAGGATC        TTGTGCTTCACGAAT  61 307
CXD84_RS15640 3223527 .. 3223537 +  -4.6  -3.30771   CGCCGCCCGTGAAAA                 TCGC ATT GCGG                 TTGTAGAGCATGTGC  49 481
CXD84_RS15655 3225826 .. 3225838 +  -7.7  -2.54523   GATCGGGCCAAAGGG                CGTAC GGC GTACG                TCCCTTCCCGTCTCA  50 43
        hppD 3235016 .. 3235036 +   -14  -3.60151   GCCTGGCGCGAGTAA            GGCCCACC CTCGC GGTGGGCC            TTGTCATTTCGGGCG  78 46
CXD84_RS15715 3238918 .. 3238930 +  -9.1  -3.18681   GAGCACGACCTCGCC                CTGGC CGC GCCAG                TTGATGACCTTGCCC  59 384
CXD84_RS15725 3240642 .. 3240655 +  -5.2  -3.21099   TGCATGAATACTGCG               CGCG AGTTAC CGCG                TTGATGCTAGAGCAG  49 450
CXD84_RS15745 3242595 .. 3242634 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD84_RS15750 3243860 .. 3243875 +  -6.1  -5.24129   TACAGAAAACCAAAC              GGCAC CACCAA GTGCC               TTTTTTGTGCCCGCC  90 220
CXD84_RS15755 3244424 .. 3244438 +  -4.2  -2.94411   GCATGAACTAAGGAG               ACCATG AAT CATGGA               ATTGTTTGACAACCT  44 30
CXD84_RS15760 3245977 .. 3245994 + -14.1  -6.11644   GCCGGCCGGCGCGAA             CCGGGCC CTCG GGCCCGG              TTTTTTTTTGCCTCG 100 63
CXD84_RS15765 NONE
CXD84_RS15770 3248765 .. 3248804 + -26.5  -3.05384   CTGCGCGACTGAGGC  CGCGGCGCCGGCCGCTCG CAGCC CGGGCGGCCGGCGCC-CG  TTCGATCAGGCCGCC 100 29
CXD84_RS15785 3251275 .. 3251296 +  -6.5  -2.87132   TTTCCCTTGTTCGGC           CTGGCGCAT GCAT ATGCGCCGC            TATATGCGGCAAGGA  48 257
CXD84_RS15790 3253015 .. 3253065 +  -5.1  -2.50034   CGGCTAAGGCCTGAC CCAACCGGACCAT-GCGGCGCGGG CCTG CCCGCGCCGCTGCGCTCCACCGGG CGTTTTCCCTTCATG  44 34
CXD84_RS15795 3254328 .. 3254345 +  -9.1  -3.14132   AGCGCCTGCAAGCGC             GCCTGGCG CAG CGCC-GGC             TTGATGCGCGCCGGA  56 68
CXD84_RS15810 3258219 .. 3258243 +  -8.4   -4.1899   GCGCTGAACACGCCA          ACCCGGGCGG CCCGT CCTCCCGGGG          TTTTCCCTAGGGTCG  76 34
CXD84_RS15815 NONE
CXD84_RS15820 3260907 .. 3260922 + -11.8  -5.18357   TGTCCATCCGGAAAA              GGCGGC CGCG GCCGCC               TTTTTTCATGCCTTC 100 50
CXD84_RS15825 3262151 .. 3262185 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 259
CXD84_RS15865 NONE
CXD84_RS15870 3270658 .. 3270676 +  -2.2  -3.57263   ACTGAAACGGCGGCC             ATCCCGGG CGT CCAGGGGC             TTTCCGCGTCGGAAT  48 36
CXD84_RS15875 NONE
CXD84_RS15880 NONE
        xerC 3273726 .. 3273761 +  -8.9  -2.80816   AGCGGTGCCGGACTT    CGC-CCTCGACGCCGG TGAAC TCGGCGTCGCGCTGCG    TGTACTCGATCAGGC  52 436
CXD84_RS15920 3280536 .. 3280562 +  -3.8  -3.93556   GCTCCGTCCCCTCTT         GAAGATGG AAATTCCGCCC CCATCTTC         TTTCGTTGCATCGAT  59 76
CXD84_RS15925 3281980 .. 3281996 + -10.1  -2.57795   AGCCAGGCGCGAATA              TTCGGGC CGC GCCCGGA              TCGATTCATAGTGGA  57 128
        dksA 3282535 .. 3282558 + -13.2  -5.07652   CCGAACGCATTACCA          GGGCTATGCT CCAC GGCATAGCCC           TTTTGTTTTCGGACC 100 76
        hslV NONE
        hslU 3284509 .. 3284534 + -11.9  -3.81027   CGGCAGCCAGGACCT         GGCC-CGCTACG TGC TGTAGCGCGGCC         TTTCCCTTACTTGGA  79 7
CXD84_RS15955 3285870 .. 3285880 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD84_RS15960 3287136 .. 3287175 + -15.6  -2.64099   TATCCGGGCCGCCCG  CGCGCGGGCGGCC-GCGCT GCT GGCGCTGGCCGGCTGCGCC  ATTCTGCTGGGAGCC  74 277
CXD84_RS15965 3288654 .. 3288667 +  -3.7  -2.62263   GCTGTTCTCGCTGCT               GCCGC TCGA GCCGC                TGCTGTAGGCGCGCT  40 4
CXD84_RS15990 3293278 .. 3293320 + -11.9  -3.18681   CCAGTTCGGCCTGGA CCTGC-GCACGGGTGGC-GGC GTC GCCGGCCGGCCGGGCCGCGGG TTCCTGCGCTTCGCC  64 354
CXD84_RS16065 NONE
CXD84_RS16070 3306131 .. 3306145 +  -3.4  -3.96327   GCAGAAATTCATGGC               GGCCTG CGC CCGGTC               TTTCTCCTCGACCGT  58 202
CXD84_RS16080 NONE
CXD84_RS16085 3309511 .. 3309545 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 280
CXD84_RS16105 3315499 .. 3315536 +  -7.6  -3.03124   GTGGCTGAACCGGAA   CGGCGAGGTTG-CGGCC GGCTG GGCGGGCAACCAAGCCG   TGTTCAAGAATCAGC  53 33
CXD84_RS16110 3318148 .. 3318184 + -12.9  -2.72144   TTTGATGCCCAAGGG    CTGGCGCAGTCCGCCAG GCG CTGGCGGACGGTCCTGG    GTTTCGAAAGAATCG  67 73
CXD84_RS16120 3319617 .. 3319631 +  -4.9  -2.88249   ACACCGCTGCCTGGC               GTGGC CGAGT GCCGC               TATGTGACCAATATC  44 173
CXD84_RS16225 NONE
CXD84_RS16230 3344111 .. 3344121 +  -8.2  -3.53012   CGCATCGATGGGCCC                 GGCC GGC GGCC                 TTTGCGCCGGCCGCG  62 50
CXD84_RS16235 NONE
CXD84_RS16240 3346252 .. 3346262 +  -6.8  -3.85817   AAATGCGGGGCGGCG                 CTGG CCG CCAG                 TTTCTGCGGCACCGT  63 189
CXD84_RS16250 3348554 .. 3348564 +  -2.4  -4.19238   CGCCGTTGGGCATTG                 CGGC CCG GCCA                 TTTTCCGATTCAAAA  62 92
        fahA 3349992 .. 3350019 + -21.4   -4.8622   CTCCGGCTTGCCGAA        GGTGCCTGTCCC AACC GGGACAGGCACC         TTTTTCCTTGCGGGC 100 108
CXD84_RS16285 NONE
CXD84_RS16290 3359955 .. 3359985 +  -3.9  -2.57132   CGCGCTGGCGCAGCA       GGCGCGCGG CCTCGACGAATTC CCGCACGCC       CTTGTCGCGCAGCAG  40 506
CXD84_RS16345 NONE
CXD84_RS16350 NONE
CXD84_RS16355 3374726 .. 3374744 +  -4.4  -2.62184   CCCTCGCGGATGACC             TGGTGCAC CAC GCGCTCCA             TGATCTCGGGCGAGG  40 362
CXD84_RS16365 3377788 .. 3377821 +  -5.1  -3.21099   GATGGTGCCGTGCTG     GATGTTCCCGGTGGC GCTG GCCTGCGGCAACACC      TTCGTGCTCAAGCCG  49 495
CXD84_RS16375 3380682 .. 3380702 +  -3.8  -3.11459   AGGGCGGGCCTGGCC            CGCCCGCG CAACC CGAGGGAG            TTCCATGCTGGTATT  45 46
CXD84_RS16380 NONE
CXD84_RS16385 3382804 .. 3382857 + -15.3  -3.01712   TGGGCGAGGACATCG TCACGGCCA-GCGCGCGGCG-GCGG CGCGAA CTGCGCGCCACGCGCATGGCCATGG TGTTCCAGGAGCCCA  77 291
CXD84_RS16395 3385636 .. 3385646 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS16400 3386880 .. 3386896 +  -2.1  -4.62783   CTTTTAGCCAGTTTC              CGGATGA ATT TCCGCCG              TTTTTCGGCTACGTC  70 255
CXD84_RS16450 3394082 .. 3394122 +   -14  -2.80816   ACCTTGCTGGACCGC GCCTGGGGGCTGGAGGCGC ATTC GCGCCTG-AGCTGCCAGGC  TATCGTGGCTGGCGA  71 268
CXD84_RS16475 NONE
CXD84_RS16480 NONE
CXD84_RS16485 NONE
CXD84_RS16490 3400936 .. 3400963 +  -8.2  -3.78775   ATGACCTTGTCGGCG        TCCTCGCCCGCC AGCG GGCGGCCGCGGC         TTTGCTGGTGGCGCA  67 131
CXD84_RS16570 NONE
CXD84_RS16575 NONE
CXD84_RS16580 3418473 .. 3418487 +  -7.8  -3.30771   GGCCTGGCCATGGCG               CAGGTC GAC GGCCTG               TTCTGCGCCATGTCC  56 163
CXD84_RS16590 NONE
CXD84_RS16595 3421628 .. 3421662 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS16610 3425940 .. 3425962 +  -4.8  -4.67982   GGCCTTATCCGTCTG           GCAGGTCATG GGG TATGGCCTGG           TTTTCTTCGGTGGCA  75 224
CXD84_RS16620 3428032 .. 3428055 + -13.8  -2.54702   TGGGTGCGCACCGGC          GCGCGCTGGC GGTG GCCAGCGAGC           TGCCTTCGCGTCTGT  69 511
CXD84_RS16635 3430695 .. 3430705 +  -8.2  -3.53012   GTGTGGATGGTGACG                 CGGC ACG GCCG                 TTTCAGCGCCCGCAG  61 275
        gloB NONE
CXD84_RS16655 3434002 .. 3434027 +  -3.3  -2.71712   GCGCCCGTCCGCCAA         GCCGCTA AAATTCCTACAA TAGCGGC          CTTTCCGCAAGGCAA  40 64
        fabI 3434875 .. 3434903 +    -6  -3.78419   CCCCGTAGGGGGACT        GGCACCGG CCAAATTCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 57
CXD84_RS16665 3436130 .. 3436159 + -17.9  -2.62616   CTGTCCCCGCAGGGA       GGGTGCCTGTCCC CGCC GGGACAGGCACAC        TGCTGTACGCCATCG  85 56
CXD84_RS16675 3437852 .. 3437885 +  -8.9  -3.53091   CCTCGATACGGCACG     TGCTGCAACCAGGC GCCGCTG GCCTGGC-GCAGCA     TTTCGCCGGCCAGGT  61 460
CXD84_RS16695 3441623 .. 3441633 +  -4.6  -4.12188   AGACCGTGTGGGGCA                 TCGG CTA CCGG                 TTTTCGCCCTGATGA  62 3
CXD84_RS16700 3443072 .. 3443124 + -14.1  -3.33696   TGCGAAGGCTTGACC CGCCGGCCG-CGCCG-TC-AGGCGCC CGGC GGCGGCAAGAGCGGCACCGGCCGGCG TTCCTTGCCGAACAC  75 28
CXD84_RS16715 3447417 .. 3447454 + -16.9  -3.18274   CCCGACAATCCGCTG   TCGCCGGCCGCC-CTCCG CTT CGGGCCGGCGGCCGGCGC   TTCCATTCCAATCCA  84 85
        minC 3448409 .. 3448427 +  -2.4  -3.86346   GCCTTCATACGCTTT             TTGCTTTA CGA TAACGCGA             TTTGTACGCACATAA  54 87
        minD NONE
        minE 3449696 .. 3449714 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 191
CXD84_RS16780 3460028 .. 3460047 + -10.6  -5.50499   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTACCTGTAA 100 49
        uvrA NONE
CXD84_RS16795 NONE
CXD84_RS16800 3468103 .. 3468145 + -14.1  -3.07935   AGGTGCAATACCACT GACT-CCGGTGCCTGTCCCC GCAG GGGGACTGGCACCGGCAAAC TTCCGTGCCTGCCGT  72 24
CXD84_RS16805 3469804 .. 3469819 +  -2.4  -3.01712   CCGGGCTTGCCCAGC              GCGGCG CGGC TGCCGA               TATTGACGACCCGCC  41 437
CXD84_RS16820 3472897 .. 3472931 +  -5.4  -3.53811   GCCTTGCTCGCCGCC     GCGCCTGCCGCCTGAC CAT GTCCGCCGCCCGGCTC     TTTGCCCGCAGTCCC  54 11
CXD84_RS16825 3474150 .. 3474174 +  -9.1  -3.01712   GCTTCGGACAGGTCG          CCGGCGCGCAG CGC CAGCGGGTCGG          TCTTGCCGCCGGCGC  55 524
CXD84_RS16835 NONE
CXD84_RS16840 3476851 .. 3476868 +  -2.6  -3.05463   CGCGGGCGCGGCGTT             GGCGGT ACACTG ACAGCC              TTCCATCCAGCCGGT  41 52
        pdxH NONE
CXD84_RS16850 NONE
CXD84_RS16855 NONE
        purU 3480137 .. 3480151 +  -5.6  -3.05384   CGAAATGGCGCAAGG               CCGCCT GCA AGGCCG               TTGCCTGCAGGGACG  46 65
CXD84_RS16885 3485985 .. 3486009 + -12.8  -3.65902   GCAAGTGCAGTTTCG          CGCCACGCGC ATCCG GCGCGTCGCG          TTTCACTGGCATCGC  77 90
        apaG 3492257 .. 3492287 + -10.3  -4.13945   CATGCCGCGTACACT       GCACTGAGCCGGG CTCCT CCCGGCACGGTGA       TTTTCCGATCCGCAT  78 19
CXD84_RS16925 NONE
CXD84_RS16930 3494745 .. 3494769 +  -3.4  -3.08032   GGCAACTCATCGAAG         GGGCCTCGCGC AATT GAGCG-GGCCG          TCGTTTTCAGGAGCA  44 9
CXD84_RS16935 NONE
CXD84_RS16940 3496774 .. 3496808 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 207
CXD84_RS16960 3500276 .. 3500290 + -11.4  -3.57144   CACGGTGGCCAGCGC               CAGGGC CTC GCCCTG               TTTGCGCGTGCGCAC  71 267
CXD84_RS16970 3502675 .. 3502694 + -16.4  -3.75153   CCGCCCGATTGCCGA            CGCCGCGC GCAT GCGCGGCG             TTTCCATTGGCGCGC  88 81
CXD84_RS16990 3506056 .. 3506068 +  -3.3  -3.04792   ATTGATGCTGCGCAA                GCGCT CGT AGCGA                TATTAACCATCGTGA  42 16
CXD84_RS16995 3507034 .. 3507054 + -14.7  -2.52676   ATCCCAAATTTTCGG            CGTCCGCCA TGG TGGCGGGCG            TCCGTTAGCAAGATC  71 40
CXD84_RS17000 NONE
CXD84_RS17005 NONE
CXD84_RS17010 NONE
CXD84_RS17015 3510156 .. 3510194 + -12.2  -3.53012   GTGCCGCCCATCCTA   CGGTAGGGCGGGGACAGC CCG GCTGAACCCGCCAAGCCG   TTTCAACAGGAAAGC  74 67
CXD84_RS17020 NONE
        atpD NONE
CXD84_RS17030 3513026 .. 3513053 + -18.6  -2.91924   CCGCCGCGTCAGGCA        GACAAAGGCGAC TTCG GTCGCCTTTGTC         GTTTCTGGCGCATCC  89 58
CXD84_RS17035 3514109 .. 3514138 +  -2.2  -3.09581   CCAGGGCAGTAAAAT       CACGGCT-TCC GATCACCAA GGATAGTCGTG       TCTGTTGCCCCTTTG  42 74
CXD84_RS17040 3515404 .. 3515421 +  -4.1  -3.60048   GGCACGACCCTGAAA             GCTCACA CCCT TGTTAGC              GTTTTTTCCCCAAAG  51 217
CXD84_RS17045 3517623 .. 3517649 +  -5.7  -2.62184   CGCTGGAGATCTGAG        CGGGGCCG-GCG CCGG CGCTCGAACCCG         TACTCTGACCGAACA  44 27
CXD84_RS17050 3519768 .. 3519778 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS17055 3520846 .. 3520887 +  -8.5  -3.14132   GGCGTTGCGGAGGGG GGAACAAGGTGCCTGTCCC CACG GGGACAGGCACCCACGCCC  TTGGTGCAGGGACAG  56 89
CXD84_RS17105 3531996 .. 3532008 +  -9.1  -3.33696   GGCGCGGTCGGCCTG                GCGCA GCA TGCGC                TTGCTTACGCGCAGC  59 219
CXD84_RS17120 3534391 .. 3534405 +  -2.7  -4.21607   CGCATCTGACGCCGC               GCGGG CCCAT CCCAC               TTTATATTCCCTCGA  63 32
CXD84_RS17125 3535573 .. 3535587 +  -3.4  -3.78934   CCCTCAAGGCGTACG               CGTAGC GCA GCCGCG               TTGTTGTGCGCGCCG  56 21
CXD84_RS17140 3539010 .. 3539023 +  -2.3  -3.07935   GGTACAATGTCGCCT               CTTCG CGCC CGTAG                TTCAATGGATAGAAT  41 184
CXD84_RS17145 3539074 .. 3539089 +  -4.6  -3.53224   ATACAGGTTCGATTC              CTGTCG GGCG CGCCAG               TTTCCCAAGGCCCTA  52 11
CXD84_RS17200 3548741 .. 3548771 +  -8.2  -3.53012   CTTATCCCTGATCCC      GGCGCTGGCC-GC CATGGC GCTGGCAGGCGCC       TTTCCCGCGCCGAGC  62 194
CXD84_RS17210 3551821 .. 3551837 + -10.8  -2.73875   GAAGGTCCTGACCGG              CGCGCG GGTGG CGCGCG              TGGTGTTCCAGAACC  60 372
CXD84_RS17220 3554210 .. 3554227 +  -8.3  -3.90112   GACAGGGCAGGGCCG             CGCCGCC GCCA GGCGGCC              TTTCCTTGAAAAACC  70 41
CXD84_RS17225 NONE
CXD84_RS17230 NONE
        aspS 3557221 .. 3557253 +  -9.8  -3.64703   GCCAGCGGCCGGAAT     CGGGC-AGGCCGGGC AATG GCGTGGCTTCGCCCG      TTTCGATAACGCGCC  70 81
CXD84_RS17240 NONE
        clsB 3559426 .. 3559438 +  -6.2  -3.14132   CGCCGGCCAGGATGC                GCGG CGTCA CCGC                TTCGTCCAGGAACCA  50 111
CXD84_RS17270 3564390 .. 3564433 +  -8.1  -3.18199   CGAACCGCTGCAGTA AAC-C-G-CGGCGTCCGCCGGC CTC GCCGGCGGACGCTGTCCGCGCC TTGCCTTGCGCCTTA  54 25
CXD84_RS17275 3565798 .. 3565822 + -10.7  -2.71011   ACGCCGCCTGAAGCG         CGGCGGCCGC CAGCCC GCG-CCGCCG          TGCTTCAGCCGGCGT  60 30
CXD84_RS17285 3567850 .. 3567880 + -10.3  -3.43446   GGGGCTGGGGCAGCA       GGCCATGCGCGCG CGCAA CCCGCGCCTGGTC       TATTGTTCGGTATCG  65 374
CXD84_RS17295 3569589 .. 3569607 +  -8.1  -3.47227   CGCGTCGGACAGGCC            GGCGC-CG ATGC CGCGCGCC             TTGTCGTCCTTGCCG  58 209
        rapZ NONE
CXD84_RS17335 3576895 .. 3576905 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS17340 3578325 .. 3578359 +   -10  -3.41229   CCGGTTGCGCCGGGT    CCTGCTGCGCCTCGC CGCTGA GCGA-GCGCGCCAGG     TTCTGCTCGAACTAT  65 441
CXD84_RS17400 3589324 .. 3589345 +  -7.3  -4.61873   CCACCAAGAATTCGA           TGCCCAG CCCTTGCA CTGGGCA            TTTTCATTTGTGCGC  79 35
CXD84_RS17440 NONE
CXD84_RS17445 3603757 .. 3603812 +  -7.4  -4.18197   CGTCCAGCGTGATTT CCACGATGGCCGTCAGCGTGCTGCCCA CCT TGGCCGGCGCGACGATGGCCACC-TGC TTTTCGATCACGCCT  73 304
        glmS 3606275 .. 3606313 +  -8.1  -2.56715   GCAGGCGGGCGATAT  CCATCGG-CGCG-CGCTGC ACG GCCTTGTCGCGCCCGATGG  TGCATTCGTCCAGGT  48 330
CXD84_RS17475 NONE
CXD84_RS17480 3612513 .. 3612567 + -20.2  -2.50779   TGACAGTAGGCGGCC CAGGCTGGCGCGCATGCGTCGCGGCAA GGCC TTGCCGCGACGC--GC-CGCCGGCATG CTGTTGGCTTGTCAT  95 38
CXD84_RS17485 3614016 .. 3614027 +  -7.2  -3.51934   ACCACATCGACCGCC                GCGC TCCA GCGC                 TCTTTCTGCAGGGGC  58 449
CXD84_RS17495 NONE
CXD84_RS17500 NONE
CXD84_RS17505 NONE
        argE 3618656 .. 3618705 +    -2  -3.50133   GGTAGTGGTGATGTA CCCCCCCGTCACGAACGCCGGGCT TTCG GGTCCGG--TCCATGACGGTGGCG CTTTTTCTACAACTA  48 74
CXD84_RS17515 3619766 .. 3619790 +   -20   -3.3514   ATCGACTGATCGCGG          CGGGCGCCCG CGGCC CGGGCGCCCG          TTGTGCCGTGTCGGT 100 32
CXD84_RS17520 3621107 .. 3621124 +  -5.5  -2.71712   CAGAAGAACATCATT             TCCAAGG CCAT CCTGGGA              CTTTGAGCGAGAGGC  45 2
CXD84_RS17525 3622416 .. 3622435 +  -3.4  -3.65812   TCAGTTCGGGCTTGG            CGTCGTAC AGGT GGCCGACG             TTGTGTTCGGCGGGG  51 167
CXD84_RS17540 3626349 .. 3626359 +  -8.2  -3.35813   TCGGCAACTTCTTCG                 GCGC CGA GCGC                 TTCGTTCCCATCACC  60 176
CXD84_RS17550 NONE
CXD84_RS17555 3628055 .. 3628089 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS17575 3632507 .. 3632541 +  -8.5  -2.71364   CCGCGTAGAGCTCGC    GGCTGATCACGCC-CC GGGT GGCGGCGTGCTCGGCG     TACTTGGCGCCCTGC  52 504
CXD84_RS17625 NONE
CXD84_RS17630 NONE
CXD84_RS17635 3644265 .. 3644281 + -15.1  -5.75945   TTCCGTTTTCCTCCT              GCCGCGC TCT GCGCGGC              TTTTTTTTGGGGCGT 100 55
CXD84_RS17640 NONE
CXD84_RS17645 NONE
CXD84_RS17650 NONE
CXD84_RS17655 3648079 .. 3648089 +  -2.4  -3.02511   CGACCTGCTGCAAGA                 CCCG TAC CGGC                 TGTTGCGCAACTGAC  41 1
CXD84_RS17660 NONE
CXD84_RS17665 3651153 .. 3651189 +  -9.9  -3.69395   GGGCAGCGGCCGCCG    CAGCACGGTGGCCGGCG CGG CGCTGGCCAACGCGGCG    TTGTTCCATGGTCGA  70 303
CXD84_RS17675 NONE
CXD84_RS17680 NONE
CXD84_RS17685 NONE
CXD84_RS17690 NONE
        lpdA NONE
CXD84_RS17700 3659283 .. 3659304 +  -4.3   -2.5474   GGCCTGCGCCAGCAG           CC-GTTCGGC GTT GCCGTGCAGG           ATCTTCTCCATCGCG  42 103
CXD84_RS17720 3663911 .. 3663944 +  -7.3  -3.65902   GTCAGCGGGTGCCTG     TCCCCCGTGCGGG GACAGGCA CCCGGGTGGGGGG      TTTACATGCGCTCGA  61 50
CXD84_RS17730 NONE
CXD84_RS17735 3666237 .. 3666275 +   -11  -3.20723   TGCCCGCTGCCGATG  ATGC-CCACCAGCGGCG CGAACA CGCCGGTGGTGGCGCAG   TTGAGTTCCTCGACA  64 224
CXD84_RS17760 NONE
        grxC NONE
        secB NONE
CXD84_RS17775 NONE
CXD84_RS17780 3674460 .. 3674497 + -13.3  -2.79183   CGCGAAGATGCGCGG   CGCAGCCGC-GCCGGTGG CCG CCAGCGCCTGCGGCAGCG   TGTCGTGCACCTGCA  67 293
CXD84_RS17795 3676649 .. 3676661 +  -9.1  -4.09685   GGTGTCCTGGACGCC                CTGGC CGC GCCAG                TTTTGCGCCATGGAC  72 173
CXD84_RS17850 NONE
CXD84_RS17855 NONE
CXD84_RS17860 NONE
CXD84_RS17865 3692502 .. 3692552 +  -8.1  -4.32857   GAGGACGGGCTCCCA GGGTTCGGCAGGTGCCTGTCTCC CGTGC GGGGACAGGCACCTGAGTGTCAC TTTGTCTTTGCCAGC  77 49
CXD84_RS17900 3698915 .. 3698942 +  -6.2  -3.17714   GCGGCTGTACTGATT        GTTGGCGTCGAC CAGC GTCGACAGCAGC         TTCATGAAGATTTCG  50 69
CXD84_RS17940 3708367 .. 3708379 +  -7.7  -3.61398   CAGCGCGATCGTGCC                CGTCA GGT TGACG                TTCTTGGGAAACCGG  60 299
CXD84_RS17950 NONE
CXD84_RS17955 NONE
CXD84_RS17960 NONE
CXD84_RS17970 NONE
CXD84_RS17975 3713233 .. 3713275 + -14.2  -3.33696   CATGAAGCACTGATG CGGTACG--GGGCGG-CGGCC CGCA GGCCGTCCGCCCCGCGCACCG TTCATTCCAGGCGGA  75 28
CXD84_RS17990 3716604 .. 3716628 + -14.9  -2.90075   CGCCGGTATCGATTT          CGCTGGCGGCC TGA GGCCGCCGGCA          TATGGTTCGAACGCC  73 12
CXD84_RS17995 3718186 .. 3718200 +  -2.7  -3.72576   AGGCCTGGCCGGACA               GCGGC AACGG GCCGA               TTTCCTGCAGCAAGG  53 464
        kynU NONE
CXD84_RS18025 NONE
CXD84_RS18030 NONE
CXD84_RS18035 3724195 .. 3724222 +  -3.2  -3.54424   CCCGTTCTTGATGTC        CGCGGC-GCGCGC GCC GCGCCCTGACCCG        TTTCCGACCGTCCCA  49 49
CXD84_RS18040 3725443 .. 3725457 +    -7  -2.62983   CGAAGCGCGCCAGCA               GCGCCG GTT CGACGC               TGATCTCGGCCTGCC  48 293
CXD84_RS18065 3728452 .. 3728479 + -19.2  -3.02324   GCGCCGTGTTGATTC        GGTGCCTGTCCC GACA GGGACGGGCACC         TGTGCTTTCGATCAG 100 57
CXD84_RS18080 3731626 .. 3731667 +  -6.5  -3.11634   CCGGCCGAATCGCTG TCGGTGCCGGTG-AGCGATC TGT GATCGGTGCGCCTGCACGGG TTCCGTCATCTGGGG  51 2
CXD84_RS18085 3732813 .. 3732863 + -18.9   -3.6579   GAGCGATCGACAGGG CGGCGGCGCCTGGCCGATGGCAGC CGGC GCCGCCGCCGGCCAGGCGG-GCTG TTGTTAGAATCCCTT  95 39
CXD84_RS18090 3733724 .. 3733758 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS18105 NONE
        rocF 3736904 .. 3736914 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 80
CXD84_RS18115 3738073 .. 3738087 +    -7  -3.41693   GCCCGATTTGGCGTA               GCCGGC CAC GCCCGC               TTCGTTCATGGTGGG  58 180
CXD84_RS18180 3753844 .. 3753870 +  -2.1  -3.61178   CCCTGGCTGCAGGCG         TTCCGGCCTGC CGTCC GCTGACCCGAA         TTTCCGATCCATCCG  48 5
CXD84_RS18185 3755082 .. 3755096 +  -2.7  -4.07568   GCAATACGCTATGCT               CGACG CGCGC CGCCG               TTTTCGCCGGCGCAG  59 70
CXD84_RS18190 3755537 .. 3755561 +   -15  -4.57073   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG 100 49
CXD84_RS18205 3758024 .. 3758034 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 71
CXD84_RS18210 NONE
CXD84_RS18215 3759712 .. 3759728 + -10.8  -5.10497   GGCCGTAGTTCAACA              GCCCGC CTCGA GCGGGC              TTTTTTGCGTCGGTT 100 47
CXD84_RS18220 3760134 .. 3760144 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS18230 3761137 .. 3761182 +    -6  -2.89564   TACAACCTATTGACA GTTCACACCTAACCCCCACC CGCCCC GGTAGGGGCTAGGAGATAAC TGTGTCCGATACCAA  48 14
CXD84_RS18235 3761740 .. 3761750 +  -2.4  -3.39895   GTGCAGGTAATGGCC                 CAGC TCG GCGG                 TTCGTTCATGAAGCA  46 114
CXD84_RS18245 NONE
CXD84_RS18250 NONE
CXD84_RS18255 NONE
CXD84_RS18260 3764083 .. 3764097 + -12.8  -3.02511   CCGCCTGATCTCCCT               GGGCGG CGC CCGCCC               TATTACCCACGTAGC  67 33
CXD84_RS18265 NONE
CXD84_RS18270 NONE
CXD84_RS18275 NONE
CXD84_RS18280 NONE
CXD84_RS18285 3766927 .. 3766937 +  -8.2  -3.54424   CAGCAGCTCGCCTGA                 CCGC ATG GCGG                 TTTCGAGGGATAGCA  63 406
CXD84_RS18305 NONE
CXD84_RS18310 3772182 .. 3772205 +  -5.2  -3.74224   AGTTCACAGTTAGGC          CGCTTTCC-CC CAT GGCGGGCAGCG          TTTGCCTGATTTGGG  57 28
CXD84_RS18315 3772982 .. 3773010 +  -4.4  -3.44622   ACTTCGACCGATTCC        CCGCGCTGGTTG GTCAG CGGCCAGCGCAC        TTCGTTCTGCGGGTC  49 329
CXD84_RS18330 3775212 .. 3775231 + -16.4    -3.767   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC  91 219
        dnaA NONE
CXD84_RS18360 3780842 .. 3780855 +  -2.3  -5.03145   CGCGCGCGAACGGTG               TGGCC GTGA GGCTG                TTTTTTAAGGCGTTA  79 81
        gyrB 3783362 .. 3783383 + -13.7   -4.4078   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG 100 53
CXD84_RS18375 NONE
CXD84_RS18380 3787145 .. 3787199 +  -6.3  -3.76759   CCTGCAGGCGTGCGC GAGGGGCGGCGTAT-ACTGGCTCTCGC CGC GCGAAGGCCGGCCAT-CGCCGTGCCGC TTTCCTGACCTTCAT  62 369
CXD84_RS18390 3788437 .. 3788487 +  -6.3  -3.44848   GCAAAATCTGCAAAG CGGG-CTT-GGCTACATTGCGTTC ACTGGA GATCGCA-TGAAGCCCAAGACCCG TCTTTACTACGCCGA  55 79
CXD84_RS18395 3789331 .. 3789344 +  -9.5  -3.26471   GCGTTGCAGGCCCGC               CCGGG CCGG CCCGG                TTACTATGGCCGTAG  61 40
CXD84_RS18405 3792285 .. 3792320 +  -5.6  -3.09681   ATGATGCAGTGCAAA    TATTACGTTTACGT AAACGTAA ACGTAAACGTAAAG     TTGAGTCGGGTTTTC  49 487
CXD84_RS18420 3794084 .. 3794118 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 218
CXD84_RS18440 3799008 .. 3799021 +  -3.1  -2.79796   CATCAACGCCCCACG               GGTAT GCCC ATGCC                TATCATCGAATCCCG  40 117
CXD84_RS18445 NONE
CXD84_RS18450 3802688 .. 3802726 +  -6.7  -3.14931   CGCTGATCGAAGTGA  AG-TGA-ATGACGCCGGGC GCG GCCCGGCGTCGGGTCAGCC  TTGCTCCGGCGTGAC  52 21
CXD84_RS18465 3805494 .. 3805531 +    -9  -2.70932   TGCCCAGCGCCGGCG   CGGGCGCGCCG-GGCTC CACCC GCGCCACGCCGTGCTCG   TCGTTGGCGGCGAGA  52 188
CXD84_RS18475 3807712 .. 3807724 +  -6.2  -2.64155   CGTCCCGACTCCAAT                GCGC CAATC GCGC                TGCCTTTCCGCCAGG  46 70
CXD84_RS18480 3809849 .. 3809878 + -20.9  -3.29144   CGGGCGCCGACGCAA       TGCACAACCCACC GCAA GGTGGGTTGTGCA        TTCTGGACGCGGTCG 100 59
CXD84_RS18485 3812317 .. 3812336 +  -3.4  -4.07568   GAAAACGTGAAGACC            GCGCGCAG CGCA CTGCCCCC             TTTTACAGAGCCGCG  59 87
CXD84_RS18490 3813006 .. 3813041 + -16.8  -2.70525   GATGCGGCCGCGCCA    GACATGGCGCGCCGGC CCGT GCTGGCGCGCCATCGC     ATTGATTTCCGGAAC  80 39
CXD84_RS18505 3819309 .. 3819331 +  -5.4  -3.50853   GCACCGCGCGGTCCA           CGCGACCGAC GCG GCCAGTTGCG           TTATCGTTGCCGCAA  54 102
CXD84_RS18510 3820433 .. 3820443 +  -8.2  -2.82635   GCGATTCGTGCGCAA                 GGCC CGG GGCC                 TGTGATGATCGAGCT  54 10
CXD84_RS18515 NONE
CXD84_RS18520 NONE
CXD84_RS18525 3822860 .. 3822881 +  -3.5  -3.64822   AGTTCTGAGCTTGCC           CGACCCGCG AGGC TGCGCGCCG            TTTCCCTGCAGGACT  54 33
CXD84_RS18530 NONE
CXD84_RS18535 3825587 .. 3825634 +  -2.7  -3.02511   TGGCGGTGGACAACT CC-TGGATGTTCATCAGCACCGA CGCG TCGCCGCTGACGCACA-CCACGG TCTTGCCGGGATGCG  41 467
CXD84_RS18545 3827733 .. 3827749 +  -5.7  -3.28712   GATCGCGCGCCAGCG              CGGCCAG CGG CAGGTCG              TTCTCGGCCAGGCCG  52 137
CXD84_RS18555 3829439 .. 3829469 +  -8.9  -3.21063   TGTGCCGGCACTTTC      CCGC-CAGACGGGC GCTC GCGCGCCTGCGCGG       TATTGCGTTTGGCTG  56 299
CXD84_RS18560 3830476 .. 3830486 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 270
CXD84_RS18570 3831527 .. 3831575 +  -9.7  -3.03159   CGGCGCACGTCCTCT TCGGCG-CGGCC-GCTGCGCGCCAC GTA GTCG-GC-CAGCTGGTCGGCGCCGA TGTTGCCCACGTTGA  59 62
CXD84_RS18580 NONE
CXD84_RS18585 3838398 .. 3838420 +  -8.4  -4.05714   CGCGGCTGAGCCCGC          GC-CGCCGG CCAGCC CCGGCGTGC           TTTATCATTGGCCCT  72 32
CXD84_RS18590 NONE
        thiD 3840182 .. 3840192 +  -3.2  -4.21462   GTTGACTCCCCTATA                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  63 67
CXD84_RS18600 NONE
CXD84_RS18605 NONE
CXD84_RS18610 3842426 .. 3842466 +  -6.8  -3.05268   CGTGAAAAGAAGTCA CCGCGTCGACGCAGC CCAGGGCCGCCA GCAGCG-CGGCGCGG  TCTTGCACCTGATTG  48 246
CXD84_RS18620 3844084 .. 3844097 +  -3.7  -2.87132   GCGCCCTGCGACCCG               GGCGC GCCC GCGCA                TCTGTAACAGGGACG  43 97
CXD84_RS18625 NONE
CXD84_RS18630 3846225 .. 3846256 +  -4.4  -3.72576   CAGGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  55 92
CXD84_RS18635 3847636 .. 3847670 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD84_RS18650 NONE
CXD84_RS18655 NONE
        fusA NONE
         tuf 3853589 .. 3853614 + -11.1  -4.62203   AGCAGTACCCAACCA         GTGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CXD84_RS18670 3853986 .. 3854025 + -20.2  -3.53091   TGTGGCGCAGCTCGT  GAAAAATGGCCGCATTCC CCCG GGAGTGCGGCCATTTTGC   TTTGGCGCGACAGCT 100 63
CXD84_RS18675 NONE
CXD84_RS18680 NONE
CXD84_RS18685 NONE
CXD84_RS18690 NONE
CXD84_RS18695 NONE
CXD84_RS18700 NONE
CXD84_RS18705 NONE
CXD84_RS18710 NONE
CXD84_RS18715 NONE
CXD84_RS18720 3859109 .. 3859131 + -17.8  -5.84381   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG 100 70
CXD84_RS18740 NONE
CXD84_RS18745 3863206 .. 3863217 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAGTT  44 31
CXD84_RS18750 NONE
CXD84_RS18755 NONE
CXD84_RS18760 NONE
CXD84_RS18765 NONE
CXD84_RS18770 NONE
CXD84_RS18775 NONE
CXD84_RS18780 NONE
CXD84_RS18785 NONE
        secY NONE
CXD84_RS18795 NONE
CXD84_RS18800 3868302 .. 3868321 +  -2.8  -3.08812   GCGTCAAGGCTAACC            CAGTTAGCG GTA CGC-AACGG            ATTTATTCAAGGAAC  44 28
CXD84_RS18805 NONE
CXD84_RS18810 3869101 .. 3869116 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  44 3
CXD84_RS18815 3869831 .. 3869860 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  78 98
CXD84_RS18820 3870969 .. 3870997 + -21.7  -2.84218   CCGTAAGCAGTCAAG        CGCGGTGGGCGCG CCA TGCGCCCGCCGCG        ATGTTTTCATGCATC 100 35
CXD84_RS18825 3871534 .. 3871563 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCGCGCG 100 46
CXD84_RS18835 NONE
        dsbD 3874396 .. 3874449 +  -3.1  -3.04144   GCTCCTGACGTTGCT TCGTATC-GCCTCGGGCGCGC-CCG AGGCGA TGGCGTGGGCGAGAGGCTGGTACGA TGTTGCCCATACCAG  42 33
CXD84_RS18845 3875648 .. 3875658 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGGCGC  52 207
CXD84_RS18860 3878111 .. 3878137 +  -6.4  -5.14563   CCGTTGTCTATGAGG         GGGGGGAAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAACGC  90 112
CXD84_RS18865 NONE
        ccsB 3881601 .. 3881630 + -22.3  -3.54459   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 44
        cyaY 3883973 .. 3884026 + -17.3  -2.80816   CGACGTCGCTGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCACGCAGCA TATCGTCCATGACGA  78 513
CXD84_RS18895 NONE
CXD84_RS18900 NONE
CXD84_RS18905 3889057 .. 3889112 + -14.6  -5.14965   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCCGGCGGA TTTTTTCGTCCGCGT 100 120
CXD84_RS18920 3894166 .. 3894184 +   -16  -3.44848   GCTTCACCCAGTATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  82 142
         ssb 3894814 .. 3894829 + -10.4  -5.78622   CGCTGGATGCGAAAG              CCCTGC CCAG GCAGGG               TTTTTTTTCGCCTGG 100 57
CXD84_RS18930 NONE
CXD84_RS18935 3897655 .. 3897667 +  -4.8  -3.32844   GGGCTGGGCCGGGCC                GCGA TCGAT TCGC                TTATCCGCTGACCGC  49 2
CXD84_RS18940 NONE
CXD84_RS18945 NONE
CXD84_RS18950 NONE
CXD84_RS18955 3900537 .. 3900579 +  -7.4  -2.79796   GCCAGCATATGGGGC ACCTGCACCGCCACGTCGCG CGT CACGCCCAGGCGTTGCAGGG TGTCCTGCAATACGC  49 284
CXD84_RS18965 NONE
CXD84_RS18970 3904123 .. 3904153 +  -3.2  -2.63301   GGATCTTTCCTGCCA       GCAGTGTGTCTATG TAC TACATTCACACTGC       TACTCTCAGAATGTC  39 137
CXD84_RS18975 NONE
CXD84_RS18980 3906168 .. 3906191 + -17.4  -3.28712   GCCCCGCAGCGGGGC          GCGGCTGGCC GCAA GGCCGGCCGC           TTGTCGCCCGCACGC  86 59
CXD84_RS18985 NONE
CXD84_RS18990 3908310 .. 3908333 + -17.4  -3.97331   GACACGATTGTCCTG          CCGGCGGGCG AGGC TGCCCGCCGG           TTCTTTGCCTGGATT  95 44
CXD84_RS18995 NONE
CXD84_RS19000 NONE
CXD84_RS19005 3911507 .. 3911524 +  -9.9  -3.72576   TCATGATTTCCTCTT             TTCGCAC GGAC GTGCGAA              TTTAATCGAAAAAAA  71 284
CXD84_RS19050 3920075 .. 3920090 +  -4.6  -2.53382   CCGCCGATTGACAAG              CCTGGC CGGC GCTGGG               TAGATTGCGCCTACT  42 30
CXD84_RS19055 3921199 .. 3921237 + -10.9  -3.73224   AGCGGGCGCATACCT  CGCTTGAAGGCGGCGGCC GCAT GGCCGCCGTCG-CAGGGG   TTTCGTACCCCATCG  73 39
CXD84_RS19090 3926141 .. 3926160 +  -4.8  -3.35679   CCTGGCCGAAGGAGC            GGCCTGAG GCGC CGCCGGCC             TTCTCCATCCACGAA  51 19
CXD84_RS19100 NONE
CXD84_RS19105 3929300 .. 3929339 + -13.5  -2.78715   ACTGAGGCTGCGCGA TCGCCC-GC-CCGCCGCGC GTGC GCGCGGCGCCGCTGGGCGC  TATAATGCGCAACTT  67 36
CXD84_RS19110 3929913 .. 3929940 +  -8.4  -3.06831   AGACCTCCTCGAGTG        GCGCCG-TGGTGT CGA ACGCCATCCGCGC        TTGCGTGAACGTTGA  55 477
CXD84_RS19125 3931913 .. 3931944 +   -13  -2.89668   CATCCCCGACCAGCT      GACCGACTGAGCGC CGGC GCGCTCAGTCCATC       TGTATCCCGCTCTTG  69 16
CXD84_RS19180 3943608 .. 3943620 +  -5.5  -3.55622   ACCTCGCGGTGCACC                GCGTC CTC GATGC                TTTCGCCGACTTCGA  54 315
CXD84_RS19205 3948508 .. 3948520 +  -6.9   -3.7456   GCCCGAGAACGTGGC                CGGCG GCT TGCCG                TATTTCTTGGTGTAG  61 272
CXD84_RS19250 3957883 .. 3957898 + -10.4  -2.57132   TCGCCGGCAGCAAAC              TGCCGC TGGC GCGGCA               ATTCTAGGCGGCGGG  57 3
CXD84_RS19255 3958947 .. 3958957 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS19260 3960141 .. 3960160 +  -5.6  -3.90112   CACGGCGCACAGGAC            GCCGCGGCC GTC GGCCA-GGC            TTTCCTTCAGGCCGC  60 205
CXD84_RS19295 3967397 .. 3967420 +  -9.4   -3.1372   AGGCCTTGATGTCGT          GCGCCAGCGC TTCG GCGCCGGCGG           TATTGGTGGCCAGTA  59 220
CXD84_RS19325 3971648 .. 3971665 + -12.7  -3.21218   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  69 86
CXD84_RS19355 3977103 .. 3977145 +   -14  -3.23853   CGCCGGCGCCGAATC CTCCGAGGCCGTGCTGGCGG CGG CCGCCGCCGCGGCTTGCGAG TATTGCTTCCACACC  75 147
CXD84_RS19365 3980990 .. 3981037 +  -6.1  -4.63218   GCGGTCTGTCTTGCA TGCGCGG-GCGCCG-CGTACGGC GTCA GGCGGGGGTCAGCGCACCGCGCA TTTTCTTCAGCGCCG  78 397
CXD84_RS19390 3985726 .. 3985755 +   -15  -4.25104   CGGGGCGTTGCATGC       TGCCCACCCGGC CCCTGT GCCGCGTGGGCA        TTTTGCTGCGCCCGC  95 55
CXD84_RS19395 NONE
CXD84_RS19400 3992331 .. 3992343 +  -9.1  -3.18264   GCCTGTCCCCGCGGG                GACGG ATA CCGTC                TTAGTACGTACGGCA  59 101
CXD84_RS19405 3993165 .. 3993179 +  -7.8  -3.28712   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTGAGGCGCCCGC  56 5
CXD84_RS19410 NONE
CXD84_RS19415 NONE
        mlaE NONE
        mlaD NONE
CXD84_RS19430 3997453 .. 3997471 +  -5.2  -4.72386   GGCCACCGCCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  81 45
CXD84_RS19435 3998250 .. 3998261 +  -5.8  -4.07568   AGCCGCGCCGGCGCG                GCTG GAAG CAGC                 TTTTCGGCCAGCCGG  64 185
CXD84_RS19460 NONE
        murA NONE
CXD84_RS19470 4003061 .. 4003082 + -18.7  -2.61274   CATCGCCTGAACCCC           GCCGCCCGC GCCG GCGGGCGGC            CTTCCTTGCAGTACC  87 31
        hisD NONE
CXD84_RS19480 NONE
        hisB 4006071 .. 4006085 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCG  42 3
        hisH 4006816 .. 4006828 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  57 39
CXD84_RS19495 NONE
        hisF NONE
        hisI NONE
CXD84_RS19510 NONE
CXD84_RS19515 4009522 .. 4009537 +  -2.4  -2.90496   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAATTTCGGAGAACC  40 7
        tatA 4009794 .. 4009819 + -12.6    -3.889   CCTAGTCCCGGCCCG         GGACCGGC-CC ATGAC GGCGCCGGTCC         TTTCCTATCGTTCCA  81 36
        tatB NONE
        tatC 4011136 .. 4011161 +  -5.3  -2.52676   AAGTAGACGGTTTCA         CGCTTGCCGCGG CCG CC-CGGCATGCC         TACATTGCCGGCATG  44 65
CXD84_RS19535 4011898 .. 4011911 +  -3.7  -4.25104   CATGACCAGGCTGCT               CGCCG TGAT CGGCA                TTTTCATCGCCACGG  65 264
CXD84_RS19545 NONE
CXD84_RS19550 NONE
CXD84_RS19555 NONE
CXD84_RS19560 4015481 .. 4015491 +  -3.2  -3.63968   ATATTGCGAATGAAC                 CCTT CCG GAGG                 TTTCGACGTTTCCGC  53 28
CXD84_RS19565 4016240 .. 4016258 +  -6.6  -3.09785   CGGCAGCGTCGATAT             GCTGAGCC GCC GGCTCGGA             TCTGTTCGCCTGTCC  51 21
CXD84_RS19570 NONE
CXD84_RS19575 NONE
CXD84_RS19580 NONE
CXD84_RS19585 NONE
CXD84_RS19590 NONE
CXD84_RS19595 NONE
       virB9 NONE
CXD84_RS19605 NONE
      virB11 4024623 .. 4024633 +  -2.4  -4.29396   ACGCCTGCCGCCTGC                 ACGC ATT GCGA                 TTTTCGTGCATAATT  62 40
CXD84_RS19615 4024752 .. 4024773 + -15.9   -4.7497   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC 100 37
CXD84_RS19625 NONE
CXD84_RS19630 NONE
CXD84_RS19635 NONE
CXD84_RS19640 4030143 .. 4030175 +  -5.4  -3.02043   ATGTGCCTGCTTGCT      TTGCGCACCGGCGT CCATC GCGCCGCGCCGCAA      TCTTCCCACCGCCTT  47 209
CXD84_RS19645 NONE
CXD84_RS19650 NONE
CXD84_RS19655 4033934 .. 4033967 +  -5.2  -3.71873   CGCATCGAATTCCCG    AGCCGGCG-CGG-CAC GCTG GTGGCCGTCGACGGCG     TTTCGCTGTCGCTGG  57 75
        argJ NONE
CXD84_RS19675 NONE
CXD84_RS19680 4038638 .. 4038657 +    -2  -2.89475   GGATCCGCGGGCTGC            TCTGACGC AACG GCGCTAGG             TGTGATGTCTCAATA  40 21
CXD84_RS19685 4039728 .. 4039738 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD84_RS19690 4040916 .. 4040937 +  -3.7  -2.70932   CGCCACGCTCAGGTA           GT-CGATCAG CCC CTGCTCGTAC           TGGTTGCGCGCCAGG  40 199
CXD84_RS19730 NONE
CXD84_RS19755 NONE
        glpK 4058797 .. 4058833 +  -2.2  -3.53811   CACGCCGGCGCGCCG   GCCGCGGGGCTG-GCC AGCTGGC GGCGCAGCACCA-GGC   TTTGCGCGCCATGCA  50 138
CXD84_RS19795 4065515 .. 4065531 +  -2.2  -2.70932   CACGACACGCACGGA              GGCC AAGCATGAA GGCC              TGGTTGCGACAACAC  38 14
CXD84_RS19800 4066422 .. 4066435 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4067545 .. 4067590 +  -6.2  -3.18264   CGGCGTGCTCCAGGT TGCCGCGGTTCAGCTTGGGC AGGATCGC GCCCA-GCTGC-TCGCGGTA TTGCTCGATCAGCGC  51 280
        mutY 4072288 .. 4072298 +  -3.2  -3.28924   CCAGCCTGAAGGTGA                 TCTG CTG CAGG                 TTCTGCCGCCCGCTG  47 95
CXD84_RS19825 4074020 .. 4074030 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 144
CXD84_RS19830 4075013 .. 4075052 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD84_RS19835 NONE
CXD84_RS19840 NONE
CXD84_RS19845 NONE
CXD84_RS19850 NONE
CXD84_RS19855 NONE
CXD84_RS19860 NONE
CXD84_RS19865 4082197 .. 4082216 + -16.4  -6.06723   GGCCGAGCGTGCACG            CCGCCCCG CAAC CGGGGCGG             TTTTTTTTTCGCGCG 100 57
CXD84_RS19875 NONE
CXD84_RS19880 4084917 .. 4084942 +  -5.9  -3.61652   GACGGAAAGGCGATG         CCGGCGTCCGG CTGG CCCGCCGCCGA          TTGATTGTTTACGCA  56 53
CXD84_RS19885 4086393 .. 4086413 +  -2.4  -2.78712   AGACCAAGCCCTATC            CCAGCGAG CCATT CACGCTGA            TCGTTCCGTTCGGCG  38 209
CXD84_RS19900 4089376 .. 4089395 +  -2.8  -4.07568   GCACCGTCACGCGCT            CCAGCGTGT CGA ACAC-CAGG            TTTTCCACAGCCAGG  58 124
        mnmE 4101810 .. 4101828 +  -6.7  -2.62184   CCGCGCCGGCGATGC            GGCC-CAC GATC GTGCGGCC             TGCTATCGCGCAGCC  47 398
CXD84_RS19965 4103918 .. 4103931 +  -2.3  -3.29947   AAACCCGCCATCGCA               CGCTG AAGA CGGTG                TTGCTGTGGTGGCTG  44 49
CXD84_RS19970 4105393 .. 4105407 +  -5.7  -3.06183   TCATCCGTTGGCCTG               CGATC TGCGC GATCG               TTCCATGGCCATCCA  47 74
CXD84_RS19975 4106476 .. 4106508 + -18.4  -3.02144   AAGAAGTAAACCGAT     CGCGCGGCCGGCGGC ATGC GCCGCCG-CCGCGCA      TCTTCCCAACGGTGC  90 32
CXD84_RS19980 NONE
CXD84_RS19985 4108552 .. 4108573 + -15.9  -5.06414   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 46
CXD84_RS19995 4110382 .. 4110393 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CXD84_RS19990 4108552 .. 4108573 - -15.9  -4.65895   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 59
CXD84_RS19960 4101090 .. 4101104 -  -5.7  -4.15788   AACGTCTTCAACAAA               GTCGA TCTGC TCGAC               GCGGCGTTCCAGGGC  69 303
CXD84_RS19950 NONE
CXD84_RS19945 NONE
CXD84_RS19940 NONE
CXD84_RS19935 NONE
CXD84_RS19930 4094417 .. 4094429 - -10.5  -2.78384   GTTTCTTTTAGCACA                GCGCG CGG CGCGC                TCAGGCCTGCTGCGC  57 26
CXD84_RS19925 4093048 .. 4093068 -    -9  -3.12999   GCATGGGACATGGAA            CCGCTCCT TGTTC AGGAGCGA            TCCATTATGAAAACG  59 130
CXD84_RS19920 4092127 .. 4092137 -  -8.2  -2.57344   GACGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTGCG  52 8
CXD84_RS19915 4091019 .. 4091032 -  -2.4  -2.86676   CCGAGGAATCGAAAC               GATG CGCGCC CATC                TCAGCTTCCCTGCGC  40 26
CXD84_RS19910 NONE
CXD84_RS19905 4089300 .. 4089329 - -22.9  -3.48593   GACGCCGCGACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       GGCGGCATTCAGCGC 100 34
CXD84_RS19895 4086514 .. 4086546 - -10.6  -4.17762   GATCGTGGAAAACAA     GGCTG-GCGCCAATG GCAT CATCGGCGCGCAGCA      TGCGAAGAAGGCGAC  89 235
CXD84_RS19870 4081813 .. 4081825 -  -9.1  -3.01791   ACGGCGTCCTGAACA                TCGCC CGC GGCGA                CCGGGTCCGGATGAA  55 446
CXD84_RS19820 4071845 .. 4071875 -  -5.2  -2.52896   CCATCCCCGAACGCA       GCACGGCCATGCTG GTG CTGCACGGCCCCGA       CGGCATCCTGCTGCA  42 379
CXD84_RS19790 4063416 .. 4063433 -  -2.5     -2.97   AAATCAATCTACAGA             GTCGGAC GTTC GGCCGGC              GCGGACGCGCCGGCC  41 112
CXD84_RS19785 NONE
CXD84_RS19780 NONE
CXD84_RS19775 4060271 .. 4060305 -  -2.7  -3.53811   GCGATCCGCCGGAAA    GCCCGGCGCCAGCG CCGTTTCC CGCCGCC-CCGGCC     CGCCGCCTCAGTGCA  49 33
CXD84_RS19770 NONE
CXD84_RS19765 4058357 .. 4058370 -  -8.1  -3.14132   GCTGTCGTGCATGAA               TGCCG ACAG CGGCA                TCCCGCTGTCCGAGC  53 358
CXD84_RS19750 4055384 .. 4055411 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  43 42
CXD84_RS19745 NONE
CXD84_RS19740 4053592 .. 4053607 -  -7.6  -2.57132   GCCTGCGCCGAGAAG              CTGTCA AATT TGACAG               GATCTGCCGCGGCCG  50 45
CXD84_RS19735 4052909 .. 4052959 -   -11  -2.50935   ACGCCACCCAGGAAC GCCCGCCCCGCGTGCTGCTGCT CGACGGC AGCGGCAACATGCGCGCCGAGC TGGTCATGACCGCCA  58 248
CXD84_RS19725 NONE
CXD84_RS19720 NONE
        zapD 4049703 .. 4049717 -  -5.6  -3.55071   CCAGACCGGCCCAAA               CTGGCA GTT TGCCGG               GCGCTGCTGAAATAG  54 137
        mdtA 4048384 .. 4048413 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  52 10
        mdtB 4045320 .. 4045342 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  42 16
CXD84_RS19700 NONE
CXD84_RS19695 4040539 .. 4040573 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS19665 4034131 .. 4034160 -  -9.9  -3.16191   CGACACCTTGAGCAA       CGCCGAGCAGCGCA AGG TGCGCGGC-CGCCG       CATCGGCATGATCTT  62 140
CXD84_RS19620 4024752 .. 4024773 - -15.9  -3.91144   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC  91 66
CXD84_RS19385 NONE
        fghA 3982773 .. 3982804 -  -4.3  -4.08706   CGCCCAGTATATAAA      GCGGCCCGGGC CCGGCCTGTT ACCCCAGCCGC       TCGACGTGAAACCGG  62 13
CXD84_RS19375 3981995 .. 3982014 -    -2  -3.53012   CTGCGCCGCGCCAAA            GTTCCGGA ATTT CCCAGTAC             GCAGGATATTTTTCT  48 54
        rpoH 3980963 .. 3980982 - -13.6  -5.40474   AGGCCCCCAAAAAAA            CAGACCGC CGTA GCGGTCTG             TCTTGCATGCGCGGG 100 55
CXD84_RS19360 3976668 .. 3976683 -  -8.2  -3.66666   GCGAAAACCTGGAAA              CCGCGC TGGT GCGCGA               ATGCGGCGAAGAAGC  63 427
        coxB 3974707 .. 3974739 - -13.4  -3.22858   CCAACTACAGGAACA     GCAGCGG-GGCGCGC TTCA GCGCGCCTCCACCAC      GTCCTTGGGTTGGAC  73 8
        ctaD NONE
CXD84_RS19340 NONE
CXD84_RS19335 NONE
CXD84_RS19330 3971648 .. 3971665 - -12.7  -3.33696   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  71 57
CXD84_RS19320 NONE
CXD84_RS19315 NONE
CXD84_RS19310 NONE
CXD84_RS19305 NONE
CXD84_RS19300 3967236 .. 3967262 -  -8.7  -2.87132   TTGGGCGTCCACAGA         TATCGGCCCCC CATGC GGGGACAGATA         CCGTCTTGGCAGTCA  54 137
CXD84_RS19290 3966108 .. 3966123 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CXD84_RS19285 3965251 .. 3965280 -  -2.6  -3.31322   GCGAAGGTTCGATAA       GCGCGACGATTC CAGGGC GTGCCGGCGCGC        TACGGCTTGTCCGCC  44 25
        glmU NONE
CXD84_RS19275 3962357 .. 3962388 - -10.8  -3.04322   TGCAACCTCGCAATA      CGCGGCGTCAGCGGA CCA TCCGCCG-CACTGCG      GGCATTATAGAAGTA  62 87
CXD84_RS19270 NONE
CXD84_RS19265 3959758 .. 3959792 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS19245 3956173 .. 3956183 -  -8.2  -5.15634   CACTCTAGGAAAAAA                 GCGC GGC GCGC                 GAAAATAATTAAAAC  95 203
CXD84_RS19240 3954732 .. 3954763 -  -8.6  -2.56596   TGGGTGACGAAGGGA      TGCGAGGGCCG-CCG TGG CGGCCGGCCCTCATT      CGGAGGTGGCGGTGC  52 21
CXD84_RS19235 NONE
CXD84_RS19230 NONE
CXD84_RS19225 NONE
CXD84_RS19220 NONE
CXD84_RS19215 NONE
CXD84_RS19210 3947897 .. 3947911 - -11.4  -3.90112   TGGCGGCCAAGGAAA               CGCTGG CCA CCAGCG               ACCTCAACACCGAGC  77 391
CXD84_RS19200 NONE
CXD84_RS19195 NONE
CXD84_RS19190 3944110 .. 3944121 -  -2.2  -3.18389   GGAAGATGAAAATCA                CGAA ACAC CTCG                 TTCATGCAGGCCCGG  42 95
CXD84_RS19185 3943227 .. 3943272 - -14.5  -3.70902   CGCGCGAGACCGAAA GCCCGGGTTTCCGGCAGCGCG TCGC CACGCAGCTGGCCACCCAGGC CACCCAGGCCATCCA  88 96
CXD84_RS19175 NONE
CXD84_RS19170 NONE
CXD84_RS19165 NONE
CXD84_RS19160 3937957 .. 3937970 -  -5.2  -3.10611   TTTACCCGAAGAAAC               GGGC CAGCAC GCCC                TGCCGCGGATGTCGG  49 382
CXD84_RS19155 NONE
CXD84_RS19150 NONE
CXD84_RS19145 NONE
CXD84_RS19140 3934196 .. 3934206 -  -8.2  -2.70932   CTCTGTCTGCAATGA                 GGGG GCG CCCC                 GGGTTCAGCGCCCGT  52 30
CXD84_RS19135 3932955 .. 3932970 -    -6  -2.55606   CTATATAGGATGAAT              GGGGTG CCTG CCCCCC               TGGGGACAGATACCG  46 163
CXD84_RS19130 3931789 .. 3931805 - -10.8  -3.19602   CGGGCTACACCAAGA              CGCCGC CCTAC GCGGCG              GGCATCGCCCTGCAG  64 155
CXD84_RS19120 3929518 .. 3929530 -  -3.3  -3.60475   AAGTGTGATCCGAAA                GCGGA CCG CCCAC                TTTGGTTGGGTCGGT  49 498
        trmB NONE
         pip NONE
        thiS NONE
        lysM NONE
CXD84_RS19065 3922081 .. 3922094 -  -5.9  -2.87931   GCCAGGTGCGACAGA               CCGGC GCGG GCCAG                GACGCGGCTGACGGT  48 330
CXD84_RS19045 3918198 .. 3918217 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TTGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CXD84_RS19040 3917135 .. 3917149 -  -2.8  -3.01924   GATTCGCCCGCAAGA               TCCC ACCAATG GGGA               GTTGGGAACGCGTCT  42 101
CXD84_RS19035 3916716 .. 3916748 - -18.5  -5.81412   CGGAGGCAAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTACGGCTGCG 100 63
CXD84_RS19030 3914996 .. 3915024 -  -7.4  -3.53012   GCGCGCTGCTCGAAA       GCGAATCGGC-CC GGCT GGCGGCGATCCGC        GGCACGGACGCCGAC  60 434
CXD84_RS19020 3912218 .. 3912241 -   -21  -2.71364   GCAGCCCGGCAAGCA          GGCGCCCGCC GGCA GGCGGGCGCC           TGGCGGCGTCAGCGC 100 34
CXD84_RS19015 3911540 .. 3911556 - -15.1  -5.53288   TTTAATCGAAAAAAA              CCGGCGC CCG GCGCCGG              ACCATGACTGCGTTC 100 39
CXD84_RS19010 3911257 .. 3911294 - -16.9  -2.65174   AAAATAAGTAATCTA   CCCGGGAGCCTGTCCCC GCAT GGGGACTGGCTCCCGCC    AACTTCAGCCGTCAG  80 104
CXD84_RS18960 3899869 .. 3899895 -  -9.2  -2.52516   CGCGGCACGACGAAG         CCGCCGCCACGC TAG GCCAGGCGCCGG         GGGCGCAGCTGTATC  51 513
        uvrA 3889814 .. 3889848 -  -2.8  -3.01712   GGCCTGGCGGCAAGA    TAGGGGGG--CGGGCG GTTCG CGTCCGTGCCGCCCTA    GTCTAGCGCCGTTTG  42 28
CXD84_RS18910 3888955 .. 3888978 -  -8.9  -3.53012   GGCGGCTGTTCGAAA          TGGGCTGAGG GGCTG CCTC-GCCCA          TGCGGCCTACCCCAA  62 183
CXD84_RS18890 3883211 .. 3883236 -  -2.4  -3.70149   TCGACAGTATCGAAA         GCCAGGCGGAC GATTG GGCCGCA-GGC         CTGGATGTCGATATC  53 331
CXD84_RS18880 NONE
        lysA 3881601 .. 3881630 - -22.3  -3.53012   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 48
CXD84_RS18855 NONE
        hemB NONE
CXD84_RS18830 3870968 .. 3870998 - -15.3  -3.13164   CCCGTAAGCAGTCAA       GCGCGGTGGGCGC GCCAT GCGCCCGCCGCGA       TGTTTTCATGCATCG  78 453
CXD84_RS18730 3860136 .. 3860156 - -15.4  -4.72272   GCCGGCCATGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCCTGAGCCCGG 100 50
CXD84_RS18725 3859109 .. 3859131 - -17.8  -3.72576   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG  93 125
CXD84_RS18640 3847446 .. 3847467 - -15.1  -3.14132   TCTGTTCTTCACCAA           GGCCACGCC TTCG GGCGCGGCC            TAGCTGTGAACTGTC  76 25
CXD84_RS18615 3841863 .. 3841894 -  -2.2  -4.68103   CCAACTGGAACAAAA     GGC-CCGCCACGAC TTCGAG GACGC-GCGGCGCC      AGGCCGTGCAATCGG  76 357
CXD84_RS18575 3831287 .. 3831321 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS18550 3827584 .. 3827633 -  -7.9  -3.91084   GCAGCCTGAAGGAAA CCCGGCTGCCGC-TCACGCC-GCC GCCCG AGCAGGCATGACGCCGC-GCCAGG CCGTTCAGGTCAGCA  68 30
        ilvB 3825093 .. 3825132 -  -4.9  -3.76224   TGGCCAGCGACGAAA CCGCC-TTCATCACC-GGC GCCT GCCTGGAGGTGGATGGCGG  CCGCTGCGTGTAGGC  58 94
CXD84_RS18500 3813502 .. 3813555 -  -9.4  -3.25823   CTGGGGCCACAGCAA CAGGACGT-GGCGGCCGCGGTCGGCG ATTT CGCCCTGCGCCGC-GCCGACGGCCTG TGGGCCTACCAATTG  61 390
CXD84_RS18470 3805001 .. 3805028 -  -8.4  -3.25823   CCTGCCGCACATCAA        GACCGGCAA-GGC CGT GCCGCTGGCGGTC        ACCACCGCCGGCCGG  59 351
CXD84_RS18460 3802952 .. 3802973 -  -4.3  -3.05596   GACGCCGGGACGGAA           GTCCTGCAT CGCC ATGCCGGCC            CCGTCCTTACTTGCG  45 32
CXD84_RS18455 3802694 .. 3802718 - -17.1  -3.20991   TCGAAGTGAAGTGAA          TGACGCCGGGC GCG GCCCGGCGTCG          GGTCAGCCTTGCTCC  84 28
CXD84_RS18425 3793840 .. 3793884 -    -2  -3.17723   GTATTTCGAAGGCAA GCTCAAGCGCCGCACCGATGCC GAC GGCATCG-TGCGTTTCCAG-GC GGCGTAGCGGGCGCG  42 56
CXD84_RS18415 3792287 .. 3792312 - -13.5  -3.38522   GATGCAGTGCAAATA         TTACGTTTACG TAAA CGTAAACGTAA          ACGTAAAGTTGAGTC  75 97
CXD84_RS18370 3783362 .. 3783383 - -11.5  -3.57144   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG  72 95
        rpmH NONE
CXD84_RS18345 3777229 .. 3777273 -  -2.8  -4.12902   GAAGTACCGGTAAAA CCGGATCGGGGCGATAAGCAG TCTC CTGATCATCGCGCT-ATCCGT GTGAAGTGAGCATCT  59 10
        yidD NONE
        yidC 3775212 .. 3775231 - -16.4  -5.55664   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC 100 43
CXD84_RS18320 3772650 .. 3772695 - -14.8  -2.78384   CGGCGCCGCAGGACA CGGCCG-AGGTCGCCGGCCGCAA GGC CTGAGGCCGGC--CCTACGGCCG GGCCGTGTCGCTCTG  72 17
CXD84_RS18300 3768950 .. 3768976 -  -7.1  -2.82516   CCCTGTACGACCAGA         GCGCGCCGGCC GACGA GGCCGAGGCGT         TCCGGCGCAGCGGCT  50 68
CXD84_RS18290 3766143 .. 3766175 -  -3.3  -3.28791   ATGTGCGGCCCACAA     GTACGGCGGGATTG AGGCCG CCA-CCCGCCGCGC      CATCGTCCGTGCCGC  47 393
CXD84_RS18200 3756523 .. 3756538 -  -8.2  -3.09273   GCGCGCCAATAGATA              GGCCAC CACA GCGGCC               CCCACCAGGATCAGG  56 199
CXD84_RS18195 3755537 .. 3755561 -   -15   -4.2828   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG  95 52
CXD84_RS18170 3751933 .. 3751948 -    -6  -3.15579   CCAACGCCCCAGCAA              GCGGCG TGCC CGACGC               TCGCGGAAGATCCGC  51 71
CXD84_RS18165 NONE
CXD84_RS18160 3751479 .. 3751495 -  -3.5  -5.00616   TTGCGTTTGAAAAAA              TCGCCTG CGC CCGGCGC              GATGCCGGACAGCGT  81 127
CXD84_RS18155 3744208 .. 3744244 - -11.3  -3.09785   GCATACGCCAATATA    GCCGCAATGCCGGCCGC CGA GCGGCCGGCCCGGCCCC    CGGTCAATACGCCAC  64 29
CXD84_RS18150 3743507 .. 3743522 - -11.8  -5.10461   CGCACGCAAGAAAAA              CGGCCC GCAA GGGCCG               TCTCAAAACGTGGGC 100 118
CXD84_RS18145 NONE
CXD84_RS18140 NONE
CXD84_RS18135 NONE
CXD84_RS18130 NONE
CXD84_RS18125 NONE
CXD84_RS18120 3737393 .. 3737409 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD84_RS18100 NONE
CXD84_RS18095 3733452 .. 3733470 - -10.3  -3.07222   AGGAGCACCTGAAGA             TCCTCGC GGCCT GCGAGGA             AGGCAATGCCGCGCG  59 110
CXD84_RS18075 NONE
        rimO 3728063 .. 3728082 - -11.4  -3.28712   TTGGCTGCGCTACAA            GCGCCACG CCTT CATGGCGC             GCGGCTTGAGCGCCG  66 434
CXD84_RS18060 NONE
CXD84_RS18055 NONE
CXD84_RS18050 NONE
CXD84_RS18045 3725121 .. 3725141 - -11.8  -3.36492   GCTGGAATTGCAGAA            GGCCGGCG GCAAG CGCCAGCC            GGTGGACGTCTTCGT  66 82
CXD84_RS18015 NONE
        dprA NONE
CXD84_RS18005 3718267 .. 3718295 -  -4.3  -3.20723   TGTTCATGAATGGAA        CGGGCGATGCGGC GAG GCCGCGTAGCATG        AGGAGGGCGTATGGG  47 131
CXD84_RS18000 3717534 .. 3717570 -  -2.2  -4.28254   GCTCAAGAGCGAAAA   CCCCAACGT-GCGCCGCA TCC TG-GGCGTGACGCCGGGC   GCCGGCGCCAACCTG  65 237
CXD84_RS17980 3712987 .. 3713012 - -10.3  -3.35679   CGTCGTCACCGAGAA         CGGCGTGGCGC AGAT GCGCCAGGTCG          ACGGCGTGGCCGTGC  63 290
CXD84_RS17965 3710779 .. 3710813 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS17945 3708027 .. 3708041 -  -8.5  -3.14132   CCTGCGCTGGATCAA               CCGCC TGTGC GGCGG               CATGCTGGTCGTGCT  56 123
        rsmB NONE
CXD84_RS17930 NONE
CXD84_RS17925 NONE
CXD84_RS17920 NONE
        trkA NONE
CXD84_RS17910 3699465 .. 3699491 - -11.4  -2.70232   CTGAATAGTACACCA         CCGCGCGGGCAG CGG CCGCGCGCGCCG         CTATTTGCGCCAGAA  62 26
CXD84_RS17905 3698464 .. 3698506 -  -3.2  -3.14344   GACCCGCGCGAGGAA TTCCATGCAGCCTGGCATGC GCC GCACGCCACGCTGGTCGCCA CCATGCCGGACGACA  45 398
CXD84_RS17895 3696966 .. 3697001 -  -2.3  -3.54424   CGGGACGCGCCGAAA    CCCTTGCCATGCGGG ACTTTA CGCGCCCGGCCAGCG     ACCCGCGGCAGTCCG  48 167
CXD84_RS17890 3695471 .. 3695495 - -10.8  -2.53382   ATCACCTTCAACGCA         TCGACCAGCGC CCCC GCGCTGGT-GA          TCACCGGCGCCTCGC  59 387
CXD84_RS17875 NONE
CXD84_RS17870 3692285 .. 3692296 -  -7.2  -3.68351   GCGTCACCAGCGAAA                CGCC AGAC GGCG                 AGATCGCCGCATCCA  64 278
CXD84_RS17845 NONE
CXD84_RS17840 NONE
CXD84_RS17835 NONE
CXD84_RS17830 NONE
CXD84_RS17825 NONE
CXD84_RS17820 NONE
CXD84_RS17815 NONE
CXD84_RS17810 NONE
CXD84_RS17805 3678076 .. 3678095 - -13.6  -4.52589   TTCCCTTAGATAAAA            CGGGCGTT ACCA AACGCCCG             GCAGGTAACCACTAT 100 37
CXD84_RS17800 3676403 .. 3676417 - -11.4  -3.09635   AGCCTGAGCATCGAA               GTGGCC TAC GGCCAC               GCCTGGCGGGCGCCG  62 125
CXD84_RS17790 NONE
CXD84_RS17785 3673792 .. 3673813 - -10.1  -3.05384   GCTTTCCGCAGGTAA           TCACCGCCA TCAT CGGCGGCGA            CGTGCACGCCGGTTT  59 423
CXD84_RS17755 NONE
CXD84_RS17750 NONE
CXD84_RS17745 NONE
CXD84_RS17740 3665835 .. 3665869 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS17725 3663900 .. 3663936 - -23.8  -2.71693   GAGGAAGGAAAGTCA    GCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGG    GTGGGGGGTTTACAT 100 35
CXD84_RS17710 NONE
CXD84_RS17705 3659208 .. 3659239 -   -15  -2.60075   GCGGGTCGAATGAAG      GCAGCCGCGCCGCC CGAG GGCGGCGCGTTCGC       ATGAGGACGAGGCCC  71 45
CXD84_RS17620 NONE
CXD84_RS17615 NONE
CXD84_RS17610 NONE
CXD84_RS17605 NONE
CXD84_RS17600 NONE
CXD84_RS17595 NONE
CXD84_RS17590 NONE
CXD84_RS17585 NONE
CXD84_RS17580 3631823 .. 3631851 -  -3.7  -3.31726   GGTCGCCACAGAATA       CCTGCGCGCTGG TCCAGG CCGGCGC-CGGG        GTGGCGCTGGTGGAC  47 199
CXD84_RS17570 3629939 .. 3629949 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS17565 3628890 .. 3628900 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS17560 3627712 .. 3627724 -  -6.9  -3.29144   CGACCTGCTGCACAA                GGGCA TCG CGCCC                AAGGCCCTGGTGTTC  52 187
CXD84_RS17535 3624137 .. 3624150 -  -4.5  -3.53733   CGGAGGTGATAAACA               CCAGT GATC ACCGG                GCGCTGTTCAGGCCT  52 33
CXD84_RS17530 3621920 .. 3621935 -  -6.8  -3.03124   GCTGACGGCGGAATA              CCTGCG CACG CGCAAG               CAGTTCGGCGTACCG  48 408
CXD84_RS17490 3613454 .. 3613512 -  -7.5  -2.70932   CCTGGCCGGCAAGCA CCAGC-C-C-ATGC-GCCTGGGCATGGCG TGGAT CCCCGTGCCCAGGCCGCGTCGCGTGCTGG AGGCCTTCATGCAGC  49 189
CXD84_RS17470 3608261 .. 3608271 -  -2.4  -3.17075   TGGTGGGCAACGCAA                 TCGG GCG CCGT                 GCATGGCCGTCCCGC  42 42
CXD84_RS17465 3607213 .. 3607226 -  -3.7  -2.56596   GTGTCGATCAATCGA               CGCTG ATGT CGGCG                ACGTTGGCGATGGTT  40 4
CXD84_RS17460 3605979 .. 3605991 -  -4.7  -4.20696   GGAGTAAGGGGAAAA                GCCGG CGG CCGGT                CAGGGAGGCTGTCCC  66 202
CXD84_RS17450 3603244 .. 3603258 -  -2.1  -3.17075   TCTGTGGGAACTCAA              CGAGGC CTTT GCCT-G               CCAGGTGCTTTATTG  43 267
CXD84_RS17435 NONE
CXD84_RS17430 NONE
CXD84_RS17425 NONE
CXD84_RS17420 NONE
CXD84_RS17415 NONE
CXD84_RS17410 3590711 .. 3590721 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS17405 3589600 .. 3589631 - -12.2  -3.03338   AGAAGTCCGCGAACA      GCAGGAGGAGCAGG CGCG CCTGGCCCGCCTGC       GCACCTTCGAACTGA  67 101
CXD84_RS17395 3587656 .. 3587682 - -11.5  -3.58231   AAAGAATGGACACAA         GCGGACGCCCG GCGCA CGAACGCCCGC         CGCGAAGGCGGGGTC  72 53
CXD84_RS17390 3586525 .. 3586535 -  -2.4  -3.14344   CAGGTCCTTGAGCAA                 GGTC ATC GCCC                 GCGCATCACAGATCG  42 31
        prmC NONE
        grxD NONE
CXD84_RS17375 3584736 .. 3584762 - -22.4  -3.64703   GCGGCCGTACGCAAA         GAAGCCTGCCCC ATC GGGGCAGGCTTC         AGGTACAGGCAGGCG 100 53
CXD84_RS17370 NONE
CXD84_RS17365 NONE
CXD84_RS17360 NONE
CXD84_RS17355 3578773 .. 3578788 -  -3.2  -3.17685   CAAGGACACATGGAA              GGTGTT AGTG AACTCC               ATCGACAAACTCCCC  44 14
CXD84_RS17350 3578218 .. 3578266 -  -7.9  -3.14132   CTGCGCCTGCAGCAA CACAGCCTGCGCATCCGGGCTG ACCACG CTGCCCGCGGGCGC-GGCCGCG GCTACAGGCGCCGCG  54 130
CXD84_RS17345 3577954 .. 3577978 -  -7.8  -2.91582   CACTGCACGGACAGA         CGCCAGTTCCC ATGC GGGA-CAGGCG          CCTCGCGTATCGGAA  52 61
CXD84_RS17315 3572738 .. 3572760 -  -5.5  -3.15579   GCAACCGGGGAGCAA          GGCGCACGCC GGCC GACGC-CGCC           ACGGCGCATGGGCAG  49 168
CXD84_RS17310 3571936 .. 3571994 -  -7.9  -2.52623   GGTGCCCGACAACAC TTCGGGCTGCGCCGCGCCG-CGCC-GGGC TGG GCCCAGGCGGCCTGGCGCCACAGCCCCAG GCCCGCCAGCACGCC  49 140
CXD84_RS17300 3569184 .. 3569220 - -10.9  -3.15544   TTCGACGCCGACGAA   GCGCGGCGCA-TCG-GC TTCGT GCGCGACTGCGCCGCCC   AGGCGCAGTGGCCCG  64 217
CXD84_RS17280 3565784 .. 3565836 - -27.1  -3.02144   CCAGGCGCTCGAAGA CGCCGCCTGAAGCGCGGCGGCCGC CAGCCC GCG-CCGCCGTGCTTCAGCCGGCG TTGGGCGCGGCCCAG 100 16
CXD84_RS17265 NONE
CXD84_RS17260 3561225 .. 3561254 - -11.3  -2.62263   ACGTCGCCGACACCA       GCGCCATCCAGCG CACC CGCTGGCCGGCGT        CGGGAAACAGGTCCG  59 509
CXD84_RS17250 3558907 .. 3558959 -  -9.2  -3.04501   ATCAATTCCGCAAGA GCCTCATGCAG--GCCGCCGCGCGCG GCGTG CGCGTGCGGCTGCTACTGCA-G-GGC AAGCCCGAATACCGC  55 403
CXD84_RS17195 NONE
CXD84_RS17190 NONE
        lptC NONE
        lptA NONE
        lptB 3543478 .. 3543493 -  -3.2  -3.66288   TATTGGCCAATACAA              GTTGCG CTAG CGCAAG               ATTGTGTACGTTTGA  53 108
CXD84_RS17165 NONE
CXD84_RS17160 3541210 .. 3541222 -  -4.7  -2.71144   CAGCTGGGGCAACCA                GGCCG GCG CGGTC                ACGCCGCTGGACGTG  43 127
CXD84_RS17115 NONE
CXD84_RS17110 3531766 .. 3531793 -  -7.6  -3.22884   GCACGAAGGCATCAA        GTCGCTGCGCGAG AAG CGCGCGCCG-GAC        TTCCGGTAAGGGGGC  56 114
CXD84_RS17100 NONE
CXD84_RS17095 3529511 .. 3529542 - -13.1  -4.20516   GGGGGACGGAAGAAA      CGTCGCGTCT-GCC AGACA GGCCAGACGCAACG      CGGCGGCGCCGCGAG  91 149
CXD84_RS17085 3526627 .. 3526658 - -17.2  -3.53012   TGGTGGTCTTCGAAA      GACCGGTCCGGCCG TCGC CGGCCCGGCCGGTC       AGATAGGTTGGGCCA  89 24
CXD84_RS17080 NONE
CXD84_RS17075 NONE
CXD84_RS17070 NONE
CXD84_RS17065 NONE
CXD84_RS17060 3520853 .. 3520880 - -21.4  -3.62597   CGGAGGGGGGAACAA        GGTGCCTGTCCC CACG GGGACAGGCACC         CACGCCCTTGGTGCA 100 56
CXD84_RS16980 3503710 .. 3503734 -    -7  -3.01791   ATCGCCGGCCGAACA          GGTGGCGGCG ATGGA CGCGGCCAGC          TACTTCAACCTGTTC  51 234
CXD84_RS16965 NONE
        folB NONE
        ttcA 3497609 .. 3497619 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS16945 3496460 .. 3496479 -  -3.4  -3.30124   GCGCACGCTGGACAA            CGTGCTGC TTAC GCCGCACC             TGGGTTATGTGAACG  47 151
CXD84_RS16915 NONE
CXD84_RS16910 3490122 .. 3490147 -  -6.7   -4.7497   GGCATGCAGCAAAAA         GCCCGG-TCCAG TTA CGGGTTCCGGGC         TTGGCGCTGCACTTC  84 212
CXD84_RS16905 NONE
CXD84_RS16900 NONE
        trpD NONE
        trpC 3486034 .. 3486066 - -12.6   -3.8186   CATCGCAAGGAAGAA     GCGGGCGGCGCGCCG GCGC CGGCGCG-CGGCAGC      GGCCGCTGAGGCCGG  81 55
CXD84_RS16875 3482171 .. 3482203 -    -9  -3.04322   GGCAACTGGCCAAGA      TGGCCATGCGCGCC GAGCA GGCGCGCAGCGTCA      TGTTCCAGACCGCCC  57 46
CXD84_RS16865 3479970 .. 3480011 - -10.1  -2.78463   AGCGCGTGGACCACA CCATGACGGCCGCCGACCTG ACC CAGGTGGGCAGC-GACATCG AATCGCTGGTGCTGT  56 113
CXD84_RS16830 3473721 .. 3473756 -   -19  -3.14132   CTCTTCCCGCAGGAA    TCCGGGTGCCTGTCCC AGCG GGGACAGGCACCCCGT     CATACGCCAGCACGC  90 76
CXD84_RS16815 NONE
CXD84_RS16810 3469293 .. 3469311 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 202
CXD84_RS16785 3460028 .. 3460047 - -12.8  -5.60993   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTACCTGTAA 100 51
CXD84_RS16775 NONE
CXD84_RS16770 3456167 .. 3456223 - -16.4  -2.80398   GAATGAATGCAAGCA TGGCAACTCGATACGGGGTGCGGCGCC GCCA GGCGCCGCACCCGGGA-CGGGACGCCG GCGCGCAACGTCCCT  77 49
CXD84_RS16765 3454764 .. 3454813 -  -6.4  -3.73775   CCGACGCCGACGAAA CCGACG-ACGCCG-CGCCGC ATGTCCAGATGG GCGGCGCCGGCGCGCGCCTG CTGGGCGGGCGCGGC  59 171
CXD84_RS16755 3453371 .. 3453426 -  -2.5  -4.45175   CAGGAAAAAAGGAAA GGGAGATGTCGCGCAGGATC-TGCCGC TTGG GCGGCACGATCTTGC-CGACACGGTTC ATCGTGTAGACGTAT  67 143
CXD84_RS16740 3450906 .. 3450921 - -11.8   -4.7497   GGCAGCCACGAAAAA              CCCGGC CGAA GCCGGG               TTTCTCGTTGAGGCG 100 66
CXD84_RS16735 3449534 .. 3449572 - -20.3  -3.25113   CCGCAAAACTGAATA   CTCGGGTGCCTGTCCCC GCACG GGGGACAGGCACCCGCT   GAATCTTGGTCCCCG 100 68
CXD84_RS16710 NONE
CXD84_RS16705 3442769 .. 3442812 -  -7.5  -3.28712   CCGCCTGCTGGACAA CCT-GATCGGCAACGC-CC-TG CAT CATGGCGCGCCGCCGGTCGAGG TCAGCCTGCGGCGCG  55 299
CXD84_RS16685 3438467 .. 3438478 -  -7.2  -3.95456   AAACGGAACAGGAAA                GGGC CGCG GCCC                 CGGGAACTGGCTAGC  66 36
CXD84_RS16680 3437103 .. 3437145 - -14.1  -2.78384   CTGGTGGCCATGATA GGCGC-GGCCAAGGCCGACG GCCA CATCGGCCCCGACGAGCGCC AGTTGCTCGAAACCG  67 302
CXD84_RS16670 3436000 .. 3436018 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 214
CXD84_RS16645 3430944 .. 3430957 -  -2.3  -3.02166   GCCGGAATGAAAGTA               CGGCA TTAT CACCG                GCCCGGATCGTCGGC  41 20
CXD84_RS16640 3430242 .. 3430276 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS16605 NONE
CXD84_RS16600 3421104 .. 3421116 -  -9.1  -3.02511   GCGAGGCGTTCAATA                TCGCC AAC GGCGA                CGTGGTGCTGTGGCA  55 368
CXD84_RS16565 NONE
CXD84_RS16560 NONE
CXD84_RS16555 NONE
CXD84_RS16550 3412472 .. 3412525 -  -4.3  -2.94144   CCGGCAGGTAAAGGA CGATGA-CGGCCAGCGGCAGGAGCGC GGC GCGGCGCAGCGGCAGGCGGATCATCA GTGCACCCCCCGCGC  44 23
CXD84_RS16545 NONE
CXD84_RS16540 NONE
CXD84_RS16535 NONE
CXD84_RS16530 NONE
CXD84_RS16525 3407157 .. 3407193 -  -7.9  -3.85698   GGCGCCGCTGACAAA   GGCGCTGCG-GCCGGC CAGCGC GTCGGCGCGCAGCACG    CGCAAGTCATCGATG  66 110
CXD84_RS16510 3405371 .. 3405385 -  -3.4  -3.78934   GCGGTTGGAGAACAA               CCGCGA AAG CCGGGG               ATCGTTGCGGGTATC  56 202
CXD84_RS16500 NONE
CXD84_RS16495 NONE
CXD84_RS16470 NONE
CXD84_RS16465 3394772 .. 3394799 - -11.4  -4.50976   GTCCAGATGAGAAAA        GCCCGCA-AAACC TGA AGTTTATGCGGGC        TTTCCGGGGCGCTAC 100 63
CXD84_RS16460 3394228 .. 3394247 -    -7  -3.08679   CGGCTCGATGCAATA            GCGCCCGC CTTC GCTGACGC             GTTCTTCAGCTACGG  52 35
CXD84_RS16445 3393161 .. 3393171 -  -3.2  -3.41602   TGCATGGTATCACAA                 TACC CAG GGCA                 TTCATTCCATCACCC  48 27
CXD84_RS16440 NONE
CXD84_RS16435 3391714 .. 3391747 -  -4.6  -4.36411   CATGAATGACGAAAA    TCC-CGACCCGG-TGC TCAG ACAACCGGGTTGTGGA     CGGTAATCAGCTTGG  69 6
CXD84_RS16430 NONE
CXD84_RS16425 NONE
        ureC 3389042 .. 3389054 -  -5.5  -3.98159   GATCAGAACAGGAAA                TAGCG TTG CGCCA                TGGGCAGCTCGGCAA  63 0
        ureE 3388345 .. 3388372 -  -6.8   -3.1372   CAGGCCCTACGAATA        GCTGAAGCCGCC GATC GGCAGCGCCGGC         GAAGACAGATGCAAC  52 62
CXD84_RS16410 NONE
        ureG 3386941 .. 3386981 -  -8.7  -3.58726   GTCCTCTATATATAA  CGGCAGGCGCGCCGGCCCG CAC CGAGCAAGCGCGTGCGCGG  GAATCTTCGGCAAGC  62 99
CXD84_RS16360 3373939 .. 3373956 -  -9.1  -3.16564   CGCCTATTCGACCAA             CCGCGTC ATCG GACGCGA              CAACGCCCTGCCCTG  56 422
CXD84_RS16340 3371145 .. 3371168 - -16.8  -6.06723   GCGGCGAAAAAAAAA          GCCCGAGATC TTGC GATCTCGGGC           TAAATCCACCAAAGG 100 465
CXD84_RS16335 3369689 .. 3369699 -  -6.8   -3.1506   AAATCTCCCTATCAA                 CCGT GTG ACGG                 CTACGGAATTGTATG  52 102
        tviB NONE
        tviC 3367363 .. 3367375 -  -4.8  -3.51232   TGGCTTTCAAATCAA                CGCA GGAAT TGCG                TGTACCAGGGCATGG  52 9
CXD84_RS16320 NONE
CXD84_RS16315 NONE
        asnB NONE
CXD84_RS16305 NONE
CXD84_RS16300 NONE
CXD84_RS16295 3359155 .. 3359182 -    -9  -2.60571   AAGCGCTCAAGGAAG        CGCGGCTGGTCG AGTC CGACCCGCAGCA         GGCCGAGATCCTGGC  51 325
CXD84_RS16280 NONE
CXD84_RS16275 NONE
CXD84_RS16270 3353383 .. 3353408 -  -3.1  -3.54543   ATCCATTGCCGGAAA         CAGGCCGTGCA CTCA TGCGCCACCCG          CCGGCAGCGCCAGCC  49 12
CXD84_RS16265 3351988 .. 3352014 -  -5.9  -5.40072   CTCGTTGCAAAAAAA        GACGCGCAAGCA TACC TG-TTGGGCGTC         AAATCGATGTCAAAT  95 87
CXD84_RS16260 3349756 .. 3349775 -  -7.1  -3.16564   GCTGGAGCTGACCAA            CG-GCGGC AAGCA GCCGCTCG            ACCTGCCCTGGGGCG  53 285
CXD84_RS16245 3345966 .. 3345992 - -10.8  -3.18582   GACCTCAGCGACGAA         CAGAGCCGCG AGCTGAA CGCGGCGCTG         ATCCTGCTGCTGGCC  64 131
CXD84_RS16220 NONE
        lolB 3339697 .. 3339713 -  -6.5  -2.52896   TCACGGCGGAAGCGA              GGGGC TGGGGAT GCCCC              TATTCTAGACCGCCG  45 46
CXD84_RS16210 NONE
CXD84_RS16205 3338648 .. 3338690 -  -4.2  -5.79595   TCGTAAAACAAAAAA GCTGCTGAACTGGAGCCAGT GTCTG ACGGGCG-C-GTTCAACAGC TTTTTTATGTATTGG 100 43
CXD84_RS16200 3337547 .. 3337571 - -12.8  -4.07885   GATCGCCGGTTAAAA          CACGCGGCGC GACAT GCGCTGCGTG          GTTTTTGCGCGCCGC  83 81
CXD84_RS16195 3336798 .. 3336836 - -24.8  -2.91695   CGTATTTGTAAAGTA   CAAAACCCTGCGCATGCA AAT CGCATGCGCAGGGTTTCG   GGGACGTCGGGCACG 100 79
CXD84_RS16190 NONE
CXD84_RS16185 NONE
        ychF 3334151 .. 3334169 -  -6.7  -3.05816   GTATTGTTTATGCAA             CCCATTG ATTTA CAACGGG             CCAATCTGTCCACCA  51 78
CXD84_RS16175 3332746 .. 3332773 - -16.4   -3.4285   GCACTCAAGGGACAA        CGGCCCTATCCT GAAA AGGATAAGGCCG         TTCTACCCACTTCGC  85 67
CXD84_RS16170 NONE
CXD84_RS16165 NONE
CXD84_RS16160 NONE
CXD84_RS16155 NONE
CXD84_RS16150 3323985 .. 3323998 -  -3.1  -2.79183   GCTATCTGTATCATA               CG-GAC TCC GTCTCG               CCGAAAAGGTCACCA  40 7
CXD84_RS16145 NONE
CXD84_RS16140 NONE
CXD84_RS16135 3322109 .. 3322120 -  -5.8  -2.89475   GATCGACATAGCAGA                GCAG CAGA CTGC                 CAGCGGTCTTATGGA  46 240
CXD84_RS16100 3311683 .. 3311710 - -10.5  -3.08679   CGGGGCCAGGCAATA        GGCGAGCGCTCC CGGCC GGCGCGC-CGCC        GGCGCCGCGCTTGGC  62 49
CXD84_RS16090 3309103 .. 3309130 - -13.4  -3.34398   TGCCGCCTGGAAAGA        CCTGCTGCTGCC GCGC GGCAGCAGCCGA         TATGAAGAACTGCGC  74 237
CXD84_RS16060 3303917 .. 3303935 -  -4.6  -2.78596   GATGTTCGGATTATA             CCTACA TGTTTTC TGTAGG             TATATATATTTTCTG  43 85
CXD84_RS16055 NONE
CXD84_RS16050 NONE
CXD84_RS16045 3300202 .. 3300220 -    -3  -3.01001   TAGCGGGAAATGACA             GTCATGGA GTC TCCTTGTC             GTTGTATGCGAGGGG  42 163
CXD84_RS16040 3299146 .. 3299186 -  -4.7   -3.2794   GTCCATGGACACCAA TGG--GCCGGGCTGCGGGGC TTGC GGCCCGCA-CCCGGTAGCCA CCCGCAAGCCTAGTT  49 35
        modA 3297969 .. 3298013 -  -9.2  -2.64616   TGCCCAGGTAGACGA GGTAGGCGCCGCCGATCC ATTTCAGCA GGATCAGCGCCGGCGACC AGGCCTTGAGCAGGG  54 302
CXD84_RS16025 NONE
CXD84_RS16020 NONE
CXD84_RS16015 3295871 .. 3295899 - -11.6  -3.30771   GTACAGGGCCGAGAA        CGGGCCGCGCAG CACTT CCACGCGGCCGG        CCGAGCCGATGTCGA  68 419
CXD84_RS16005 3293562 .. 3293573 -  -7.2  -5.30616   CGAGGGAAATAAAAA                CGCC GGAA GGCG                 GTGGTTCATGGACTG  95 113
CXD84_RS16000 NONE
CXD84_RS15995 3292990 .. 3293016 - -13.7  -3.09831   CGTACCGCAAAAGGA        CG-CGGCCGCCC CGGG GGGCGGCCGTCA         TGGGGCGAGACCGAC  73 51
CXD84_RS15985 3291375 .. 3291391 -  -5.7  -4.36914   GTCGCGCCCACAAAA              GCAGGCC CGC GCCCCGC              CCGCTTAGCGGACCT  72 30
        modA 3290485 .. 3290495 -  -2.4  -2.61264   CTGGTCAGCGACAAG                 GGCG GGA CTCC                 TGCAAGGGGTTACAG  38 35
        modB NONE
        modC 3288290 .. 3288313 -  -5.2  -3.72576   TGCGGCTTTACGAAA          TGCGGCGCAGC TAC GCCGGGCC-CA          AGCCGCAGGGCAGGG  58 394
CXD84_RS15945 3284301 .. 3284323 -  -6.8  -2.53911   TGAAGCTGGAATTCA           CCGACGACGG CAT CCGCCGGCTG           GCCGAACTGGCATTC  44 243
CXD84_RS15915 NONE
CXD84_RS15910 NONE
CXD84_RS15905 3277060 .. 3277116 -  -7.8  -2.91264   GCGTCGATCCACATA TGCGGATGCGCACCGGCGCCGGCCGCCC ACA GCGCGCCCAGCGCC-GT-CAGGGCCGCA AGGCGGCGGCGAGTT  52 15
CXD84_RS15900 NONE
CXD84_RS15895 3275475 .. 3275487 -  -4.7  -3.23637   AACATATCAATTGAA                TCCGG CAC CCGGG                CGTGCAAAATTCGTC  49 56
CXD84_RS15890 3272968 .. 3272991 -    -3  -3.85698   GCCGCGCTGGACAAA          TGGTTGCAGG CGCG CCCGCAACTG           GCTGCCGCCGGCGCC  56 362
CXD84_RS15860 3267418 .. 3267436 - -17.4   -4.4078   CGCGGCCAAGCAAAA             CGCCCCGC CAG GCGGGGCG             TTTCGCGACACGGGA 100 48
CXD84_RS15855 3267081 .. 3267095 -    -7  -3.08371   GACATGGCCAAGACA               GGCCGC CGT GCGCCC               CTCAGTAGTTGTTGC  52 27
CXD84_RS15850 3265746 .. 3265779 -    -6  -3.34005   AATGAAGCCGGACAA     CGCGTA-GCACCATG ATCCG CACGGCGCGTACTCG     CCTTTCCCGCTTCAT  53 223
CXD84_RS15845 NONE
CXD84_RS15840 NONE
        metF 3262986 .. 3262996 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS15830 3261854 .. 3261866 -  -6.2  -3.01924   GAGCGCCGCCGAACA                GGCC TTTCT GGCC                GCGTTCGAGCGCTTC  48 141
CXD84_RS15805 NONE
CXD84_RS15800 3254211 .. 3254231 -    -4  -3.57561   GGCGAACTGTTCAAA           GT-GCTGGCC GTG GGCC-GCGAC           ATGCCCGAACCCTTG  51 94
CXD84_RS15780 3248846 .. 3248863 - -11.3  -2.56596   GCGCGCATCAAGCGA             CAGCGCA TCGA TGCGCTG              CCTGGCCAGGGCCAA  59 364
CXD84_RS15740 NONE
        zapA 3240618 .. 3240632 -  -2.8  -2.95102   ACGGCAGGGACAAAC               CATGAA TAC TGCATG               AATACTGCGCGCGAG  42 55
        ssrS 3240394 .. 3240428 - -12.3  -3.05993   GGAGGGAGAGAGACA    TCCGAAGGCAGGCCTGC GAT ACAGGCCTGCCT--GGA    TAGATGCCCCGCCTG  67 27
        ilvD NONE
CXD84_RS15705 NONE
        msrA 3234599 .. 3234630 - -10.8  -3.69256   AGGCACCGAAGAGAA      GGGGCAGATCCAGG AATA CCTGGACCTGTACC       GCGGCGAAGGCATCC  74 458
CXD84_RS15690 3232976 .. 3232990 -  -4.9  -3.56643   CGGAGATCCTGCAAA               CCGCA TGATT CGCGG               TTCCGGCTTCGTCGC  52 289
CXD84_RS15685 NONE
CXD84_RS15680 NONE
CXD84_RS15675 3230493 .. 3230531 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD84_RS15670 3227258 .. 3227268 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 3227049 .. 3227083 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD84_RS15660 3226086 .. 3226106 -   -14  -4.54727   GCCTGCAAACGAAAA            CGGCTGGC ACGAA GCCAGCCG            TTGCGAGCGGAACCG 100 56
CXD84_RS15650 NONE
CXD84_RS15645 3222797 .. 3222851 -  -9.9  -3.56862   AGAAACCCGCCGAAA CCGCCAAGCC-CGCCGCGGCGCGCC CCAAGCC GGTGCG-CGCGGCACGGCTGAGCGC CTGGGATCTGCGCGA  67 285
        rnpB 3220703 .. 3220723 - -19.7  -2.52464   GGGCGCCGTAAGCCA            GCCGGCCGG ATT CCGGCCGGC            TGTCATGAAAATGCA  93 41
        mraZ NONE
        rsmH NONE
        ftsL 3218641 .. 3218662 -  -6.5  -4.16016   GGATTGTCGAAGAAA           GGCACCC-GC CTC ACTGGGCGCC           TCCGGCGGGCTGGTT  66 14
CXD84_RS15615 NONE
        murF NONE
CXD84_RS15605 NONE
CXD84_RS15600 NONE
        ftsW NONE
        murG NONE
CXD84_RS15585 NONE
CXD84_RS15580 3206781 .. 3206793 -  -3.3  -2.87132   GCGTCGTTCCACACA                GAGCG TCC CGTTC                AATCTTGTCGCGCCG  41 24
CXD84_RS15575 NONE
        ftsA 3204614 .. 3204625 -  -3.6  -3.55622   GTGAATCGCCTCAAA                GCCG AAGC CGAC                 CGTGGTCCGCAACGG  51 127
        ftsZ 3203158 .. 3203169 -    -3  -3.63968   TGCGAAAGCCGGAAA                TCTA CCAA TAGA                 CACCGGCATAACCGG  53 210
CXD84_RS15560 3202147 .. 3202175 - -14.6  -4.57073   CATCCCCGCCAAAAA        GCCTATGGCCGC TCAGC GCGGCCATAGGA        CGAAAACCGATATCG 100 52
CXD84_RS15550 3200491 .. 3200516 -  -5.4   -3.5394   AAACCCGCCGGGAAA         CGATCCAGTT TAACGC ACCTGGACCG          CAACGGCCTGCCGTG  54 77
        secA NONE
CXD84_RS15540 3196768 .. 3196781 -  -5.9  -4.19704   TAAGGTCAGTGAAAA               CGGCC TGCC GGCCA                TCCATGGATCACGCA  70 161
CXD84_RS15535 3195374 .. 3195405 -  -8.6  -2.82635   ATCCCGATCACTACA      GCCG-GCACGTCGCC TAC GCCGACCCGCACGGC      AGCTTCACCATTGCC  53 368
CXD84_RS15525 3194250 .. 3194272 -  -4.8  -2.57132   GCCCTTTTCGATAAG           GGGCGC ATTATGCCGCA GCGCCC           GCGCCGCGCGTGCGC  42 10
CXD84_RS15520 NONE
CXD84_RS15515 3192383 .. 3192414 -  -4.3  -2.62396   TACCTTGCGAGATGA      CGGGCCTGGCATG CCCCGC CAGGCAAAACCCG       TTCACGGCGCACGCC  42 79
CXD84_RS15510 3191472 .. 3191490 -  -6.7  -4.37092   ATGGTTTCCAGAAAA            TCGGCCGC ATCG GCG-CCGA             TACCCGCCTGGGCAT  72 212
CXD84_RS15465 3182672 .. 3182685 -  -5.9  -3.20991   TCCAACCGAATTCAA               GCCGA CAGG CCGGC                CACGCTGCGATCCAG  51 8
        aroQ NONE
CXD84_RS15455 NONE
        accC 3179813 .. 3179863 -  -8.8  -2.55668   GAGTTCGATATGAAT CGCGTCG--CGCGCGGCGTCGGGC ACCAG GCCCGGCACGGCGGGGTCGTCGCG GTGCCAGCTGGGCAC  52 422
CXD84_RS15440 NONE
CXD84_RS15435 NONE
CXD84_RS15430 3176527 .. 3176545 - -13.1  -5.40072   GCCGCCGCAAAAAAA             CGCCCGC ATGAA GCGGGCG             TCTTGCCGGAAGCAG 100 48
CXD84_RS15425 3175992 .. 3176029 -  -4.8  -2.78384   CGGCGCCCCAGTACA  GGCC-CAGCGAC-AGCGC GACG GCGCTTGCCATCGCGGCC   AGGTGGGACAGCAGG  43 44
CXD84_RS15420 NONE
CXD84_RS15415 NONE
CXD84_RS15410 3173619 .. 3173634 -    -6  -2.56838   TAGATCGAAATACAT              GCCGCG CACT CCCGGC               GGATCAGATAGGACT  46 29
CXD84_RS15405 3172159 .. 3172171 - -10.5  -3.53091   ATTCGGCGTCTGAAA                CGGCG CTA CGCCG                CCGCCGGAATCGCTG  67 18
CXD84_RS15375 3162550 .. 3162565 -  -3.3  -3.53012   TGTTTTCGCCGCAAA              CGAAA TATTTG TTTCG               CATTATAGGGATTAC  49 155
CXD84_RS15370 3161896 .. 3161910 -  -5.6   -4.6951   ACCACGCAAAACAAA               CACGAC AGC GCCGCG               TGCCGGACTGCCGAC  77 185
CXD84_RS15365 3161285 .. 3161340 -  -3.3  -3.40522   ACTTTCGGACGACAA CGACATGGCGGGTAGCGGCGGC-GACGT GGG AAGTCCGCCACCT-TACCCGA-ATGGCG CGCCGCTGGCGACAA  48 44
CXD84_RS15360 3159823 .. 3159845 - -11.2  -3.01712   GTTCTGCGGCGAATA           CCAGCCCGCC CCC GCCGAGCTGG           CGGCCCAGCACCTGA  62 283
CXD84_RS15350 3155898 .. 3155932 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS15330 3152475 .. 3152485 -  -2.4  -3.78934   TGTTGGTCACAATAA                 GGCG GAT CGCA                 GAGGATCGCGAAAGA  54 126
        dbpA 3151087 .. 3151101 -  -4.2  -3.28712   CCGCCGCGCTCAGAA               CTCTTC CAG GAAGCG               CATGCGGAACCGCCG  47 5
CXD84_RS15320 3150061 .. 3150090 -   -12  -3.16564   CGTGCAGCCCATCAA       CCGGCTGTGCGC CGCGGT GCGCGCCGCCGG        CGGCAGCGTGGTCTG  68 521
        pmbA 3144249 .. 3144274 - -19.1  -3.02096   GCCATGAACGAGACA         GTGCCTGTCCC CACG GGGACAGGCAC          CCTGCCGGCGCCGGC  90 51
CXD84_RS15280 3142807 .. 3142841 - -21.5  -3.53012   GGCGTTGCGCCCAAA    CAG-CAGGGGCCGCCC CGAA GGGCGGCCCCTGGCCG     GACCGAAACGGCGGC 100 45
CXD84_RS15275 NONE
CXD84_RS15270 3141699 .. 3141728 - -20.9  -3.28791   ACCGGGGCGCCATAA       GCAAAAAGGCCGC TTTC GCGGCCTTTTTGC        GGGACATTAGCGCTT 100 32
CXD84_RS15265 NONE
CXD84_RS15260 3139676 .. 3139695 -  -4.2  -2.80074   GCCCGGATAAGATCA            CTATAGCG CAGC CGCGACAG             GACTCAAAATTCCAG  41 29
        erpA 3139187 .. 3139212 - -18.3  -4.54727   GCGCCCAAACGAAAA         GGCCCTCCGGC GCAT GCCGAAGGGCC          TCGATCGCGGACCGG 100 53
CXD84_RS15235 3134070 .. 3134080 -  -4.6  -3.30124   TGGGACCCTCGATAA                 GAGG CTA CCCC                 ACCAACTTAACACGC  49 19
CXD84_RS15230 3133334 .. 3133355 -  -2.9  -4.62069   CGTCTACCGCAAAAA           TGCCTCAAG TCGG CATGAGCCA            GGCTCAAGCAAGCCC  71 52
CXD84_RS15225 3131860 .. 3131881 - -15.9  -5.30155   CCATCAATGAAAAAA           GACAGGCCC TTGC GGGCCTGTC            TTGCCGGCGGCGGGC 100 59
        nrdR 3130946 .. 3130970 -  -8.6  -2.90194   ACGGCCGCAACCACA         TGCACCCCGGC GTGC ACCG-GGTGCA          GGACGCCATCGTGCA  54 330
        ribD 3128300 .. 3128314 -  -9.2   -2.9006   AACCCATCGGATAGA               CGCGCG CCA CGCGCA               CCGCGTTCCGATCGC  56 98
CXD84_RS15190 NONE
CXD84_RS15185 NONE
CXD84_RS15180 3123899 .. 3123941 -  -2.5  -3.72576   CGCTGGCGCAGCAAA GCTGCG-CGCGGCTGGCCGAC CTG GACGGCCAGC-GCTTCATCGC GTTCTCGCGCGAGAA  53 380
CXD84_RS15170 3121966 .. 3122000 -  -6.3  -3.65522   CATGCAGGGCAACAA    CACCGGCCTGCTCGTCG GTC CGGCG-GT-GGCCGGCG    CCATTGCCGGCGCAT  57 138
CXD84_RS15160 3119872 .. 3119917 - -15.3  -3.05498   CATGCGATATATATA CACCGGC-CGGCGCGGCCGATG CGG CGTCAGCCGCGCAGCGCCGCCG CGCCTTCGCGCAGGC  77 6
CXD84_RS15150 3118170 .. 3118205 -   -19  -2.99319   AATGTCGGAGAGAGA    GGGGGGTGCCTGTCCC CGCC GGGACAGGCACCCCTT     GCCACGGGTCGGGAC  90 93
CXD84_RS15145 3116947 .. 3116977 -  -7.4  -2.66969   TATCAAGACAACGGA       GGGAGCGCGGATCG CAG CGATCCGCGGCAGC       GGTTTCCCGGGCGGC  50 175
CXD84_RS15140 NONE
CXD84_RS15135 3115178 .. 3115191 -  -4.5  -3.35813   CTTGATTTCAATCAA               GCTGCG CTT CGC-GC               TCCGGGCCGGGCTTC  51 4
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD 3111020 .. 3111053 - -28.3  -3.86015   CACCCCCGCCACAAA     CGACAACCCCCCGGG CAAG CCCGGGGGGTTGTCG      GCGAACCAAGGCCGG 100 74
CXD84_RS15080 NONE
CXD84_RS15075 NONE
CXD84_RS15070 NONE
CXD84_RS15060 3099845 .. 3099861 -  -5.7  -3.44229   AGCTTACGACGACAA              GGCGCGC CCG GCACCCC              CGGGATTGCACCCAG  53 54
CXD84_RS15055 3099103 .. 3099153 -  -2.3  -2.62184   CCGGCGCCTACATGA TGGCCCAGGCGATGGGC-GCCG-GC CTG GCGCGTCCGCCCGTCGGCTGGCACG TCATGGCCGGCCTGG  38 227
CXD84_RS15045 NONE
CXD84_RS15040 NONE
CXD84_RS15035 NONE
CXD84_RS15030 3096290 .. 3096300 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS15025 3094999 .. 3095023 -  -4.1  -3.53012   TTCGGTTCGGCCAAA          TCGGTGCGC GCCCCCA GCGCTCCGG          TACGCCGCAAGGCTG  49 288
CXD84_RS15015 3093869 .. 3093880 -  -3.6  -3.48395   ATTCCGTCTATAGAA                CGCG ATGA CGCA                 GGGCAGGCAGGCTGG  49 6
        tldD 3092332 .. 3092349 -  -6.9   -5.9873   CTAGCACAAAAAAAA             CCGCGCG TCAC CACGCGA              TTTTTCCAGGCCAGG 100 66
        aroG 3090758 .. 3090778 -  -9.7  -2.52464   GCCGGCGCGAATCCA            TCATCGGGG CAG CCACGATGA            AGGATTACGCCTTGT  55 307
CXD84_RS14995 3076792 .. 3076814 - -19.2  -4.72272   GGCGGGCATGAAAAA           GCCCACGCGA CCT TCGCGTGGGC           TTGCCGGGCACCGCG 100 57
CXD84_RS14990 NONE
        glcE NONE
CXD84_RS14980 3072411 .. 3072446 - -15.4  -3.68619   TGGAATTCATCGAAA    CGCGCGTCAAGCCC TGGGTGGC GGGCACGACGCGCG     TCGATACCGGCCGCC  88 408
CXD84_RS14965 3068486 .. 3068523 - -20.5   -2.6563   CCGTGGAATAAGGCA   CGGGGCC-GGTGCGGCGC ATG GCGCCGCGCCGGGGCCCG   CCTAACGGCGCGCGC  95 27
CXD84_RS14935 NONE
        mnmA 3061144 .. 3061176 - -11.1  -3.73775   CCCAGGTTTATGAAA      CCGCTGTGGCGGCCG CGG CCGCGGCCACCGCGA      GACCGGCGCGCCTCC  73 63
CXD84_RS14925 3060203 .. 3060258 - -24.2  -3.05596   GACCGCCTGACCGAA CCGGCGTGCAATGAAAAAGGCGGCTC GCAT GAGCCGCCTTTTTCATTGCCGGCCAC CCTGGCCGCCGACCG 100 62
CXD84_RS14915 NONE
CXD84_RS14910 3057477 .. 3057492 - -10.4  -5.96521   ACGAACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTGCCTTGC 100 62
CXD84_RS14895 NONE
CXD84_RS14890 3053770 .. 3053804 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS14870 NONE
CXD84_RS14865 NONE
CXD84_RS14860 NONE
CXD84_RS14855 NONE
CXD84_RS14850 3047604 .. 3047621 -  -2.6  -2.66869   ATATGGAAGAACTCA             CCGCCA TCTCCT TGGCGC              CGGCGCGCCGGCGCG  38 49
CXD84_RS14845 NONE
CXD84_RS14840 NONE
CXD84_RS14835 NONE
CXD84_RS14830 3044229 .. 3044270 - -14.5  -3.53012   GCTTGTCGGCCGAAA GCACGCGCGCCGCCGGCCT GTCCTG AAGC-GGCGGCGC-CGCGC GGACGCGGCGCGCCG  81 43
CXD84_RS14815 NONE
CXD84_RS14810 NONE
CXD84_RS14805 NONE
CXD84_RS14800 NONE
CXD84_RS14790 3036889 .. 3036944 -  -7.2  -3.06696   TCGCGTCGGAATACA GGCCCAGGCAGCCGTGGCTGATGCGC CCGC GCGGCTCGACCGCGGTGGCCTCGACC ATCACCAGGCCGGCG  51 205
CXD84_RS14765 3033331 .. 3033345 -  -3.5  -2.72344   TTCGAGTTCGAATTA              GCGCGC ATGG GCG-GC               CTCCAGCAGTTGGAC  41 8
CXD84_RS14760 NONE
CXD84_RS14755 3031586 .. 3031602 - -10.8  -3.31144   GCCCGAGGGCTACAA              GCGCCG CTCGC CGGCGC              TCGATACCTTCAGGC  66 35
CXD84_RS14740 3028572 .. 3028587 -  -2.5  -3.33696   CTCCTGGGTAATGAA              CCAGGC GGTCG GCC-GG              CTCAGTTGATCTGTA  44 27
CXD84_RS14735 3027144 .. 3027174 - -21.8  -3.23899   GCTCAAGTAAGGCAA       GCCGCCCGGCCGGC ACG GCCGGCCAGGCGCC       GCTCAGCGCGGCGCG 100 28
CXD84_RS14725 3025068 .. 3025104 - -23.8  -4.26076   GCACCGCCATGAAAA   GGCGCGG-CGGCCTCCC GCGA GGGAAGCCGTCCGCGCC    GGGATGAGCGGCGGG 100 70
CXD84_RS14720 3024179 .. 3024212 -  -8.7  -3.18681   CGCGAACCCGACGAA     CTGCTGACGCCGGCCC AGC AGGCCGGCAAC-GCCG     AGCACTACGCCCGCC  56 400
CXD84_RS14705 3021052 .. 3021094 - -12.6  -3.16564   GGGCTACCTGATCAA CGCGGCGACGACCACGCTGG ACA CCAGCACCATGTTCGCCGCG CTGATCAGCCTGGCC  68 140
CXD84_RS14670 3015270 .. 3015280 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 178
CXD84_RS14660 NONE
CXD84_RS14655 3011008 .. 3011029 - -12.9   -3.8591   TCCTACAATGAATAA           CGGCGCGGG CACG CCCGCGCCC            GCGGATACCGACACG  83 52
CXD84_RS14650 3009598 .. 3009623 -  -3.1  -3.15544   GCTGATGCTGACCAA         GCGCGCCGCCA GCTA TTACGCCACGC          CGCAGATCGCCTTCG  43 186
CXD84_RS14640 NONE
CXD84_RS14635 NONE
CXD84_RS14630 NONE
CXD84_RS14625 3004732 .. 3004742 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 154
CXD84_RS14620 3003255 .. 3003265 -  -8.2  -3.13899   AAGCGTGCAGGAATA                 CGCC CTG GGCG                 GCATGTACGATTTCG  56 488
CXD84_RS14605 2999973 .. 3000007 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS14590 2997996 .. 2998009 -  -3.8  -3.53224   CATTTGCCCGTCAAA               GCGA TCAAAG TCGC                CGCGAACGCGCACCC  51 314
CXD84_RS14580 2996079 .. 2996094 - -10.4  -2.89881   TATTCATTCGACACA              CTGCGG CGAA CCGCAG               CCCTGTGCGCATTGC  59 243
CXD84_RS14570 2995657 .. 2995672 -  -6.1  -3.31461   CACCCACTGGGACAA              GCGTG TCTCGC CACGC               AAAGACACCCGGACC  53 55
CXD84_RS14565 2994402 .. 2994430 - -17.5  -4.11216   CCGCCATTTTTAAAA        GGCCTTGCAACGC ATC GAGTTGCAAGGCC        TTGGTTTCTAGAGCC 100 127
CXD84_RS14540 2991883 .. 2991893 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 65
CXD84_RS14535 2990699 .. 2990755 -  -7.9  -3.63694   AGGCAGCTTCAAGAA GCC-CGACGCCGGCG-TGCATGTCGGGCC GCT GGC-CGCC-CGCGGCGCCGGCGCGGTGGC CCTGAGCGTGCTCTT  60 149
CXD84_RS14515 2986963 .. 2986987 -  -5.6  -3.91897   CGTTGCACGGATAAA         GACGGGCC-GC GACG GCTGGCGCGCC          AGGACGAGGCTGTCC  63 51
CXD84_RS14460 NONE
CXD84_RS14455 NONE
CXD84_RS14450 NONE
CXD84_RS14445 NONE
CXD84_RS14440 NONE
CXD84_RS14435 NONE
CXD84_RS14430 2972679 .. 2972706 -  -4.7  -4.07568   CGGCGTGGCGGAAAA        GGCCGCCGCGT TCGTGC AGGCGATGGCC         GAGGTGGCAGGGGCG  63 253
CXD84_RS14385 NONE
CXD84_RS14380 NONE
CXD84_RS14375 2960835 .. 2960859 -  -3.4  -3.61517   ATTCGTCGTGAAGAA          GGATCCGGCC CTGAC GGCCGAAGCG          GTGCTGCAATGGTGC  51 154
CXD84_RS14365 2957899 .. 2957935 -  -5.1  -3.13403   GGTGCGGCACGAAGA  CGGCTCGCTGGCGAC-GC TGCG GCTGCTGCC-GCG-GCCG   CTGACGCGCACGCTC  47 132
CXD84_RS14355 2955979 .. 2956005 -  -4.3    -3.445   TTATGCAGGAAAAAC         GTGTCCTAAGC GCGCG GCTCAGGTCGC         CAGCTTCACGATTCC  51 17
CXD84_RS14350 NONE
        mgtE 2953898 .. 2953908 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 157
CXD84_RS14340 2952734 .. 2952748 -  -2.7  -3.70902   CCGCCTACATGGAAA               CGGCC ATCGA GGACG               ACGAGATCGCCGAGC  53 171
CXD84_RS14320 NONE
CXD84_RS14315 NONE
CXD84_RS14310 NONE
CXD84_RS14305 2945099 .. 2945115 -  -2.2  -3.13522   ATCGCGGGATCAATA              GGAGAA TTCAT TTCGCC              TTACCTGTCACGGGC  42 176
CXD84_RS14300 2944134 .. 2944147 -  -2.3  -3.09933   CGGCAAGCCATGCAA               TGCTG GCCC CGGCA                AGGGATAGCCCGCCA  42 190
CXD84_RS14295 2943694 .. 2943708 -  -7.1  -2.70932   TGGGTCTGCCAACCA               GGCTC TGTCT GAGCC               CTGTTACTCGGCCGC  48 29
        priB NONE
        rpsR NONE
CXD84_RS14280 2942466 .. 2942482 - -10.8  -5.75342   GCCCTCGAAAAAAAA              GCCGGC ACCAG GCCGGC              TTTTTTCAGGCATGC 100 48
CXD84_RS14275 NONE
CXD84_RS14270 2940014 .. 2940047 -  -2.9  -4.56597   CTGCGGCTCGAAAAA     GAGCCTGGCCAGCGG TATC CCGATGGCCCAGGTG      ATCTTTGCCGGACAG  71 160
CXD84_RS14240 2933957 .. 2933971 -  -2.1  -3.07935   ATCGGATTCATTTAA               GCAAA CCGTC CTTGC               GGAACATATCCTTGA  41 3
CXD84_RS14235 NONE
CXD84_RS14230 2931182 .. 2931219 - -28.5  -4.26076   GGACGGCCATGAAAA   GGCAACCCCCGGGCGCC TTGC GGCGGCCGGGGGTTGCC    CTTGCAAACAGCCTG 100 51
CXD84_RS14225 2930723 .. 2930747 - -17.1  -4.36914   GCTTGCGCGAGAAAA          GCCCGCCAGCA TCG CGCCGGCGGGC          TTTTTTTCACGGTTC 100 88
CXD84_RS14220 NONE
CXD84_RS14215 2928360 .. 2928377 -  -4.1  -2.52464   CGGTGCCCGAAGGCA             CGCAGGTC TTT GACCC-CG             TACCAGCGGTGGCTG  40 130
        garL 2924756 .. 2924773 - -11.3   -4.0616   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC  81 82
CXD84_RS14145 2915495 .. 2915516 -  -2.8  -3.25072   CGCATCATAACCGAA           CCGCCGCG CCGCCC CCCGGCTG            CCCGCAACGCCAGCA  46 109
CXD84_RS14140 NONE
CXD84_RS14135 2913348 .. 2913368 - -19.7  -3.75153   TGGCTGCAATGCAAA            CGGCCCGGC AGG GCCGGGCCG            TCTCGATCGCACGTG 100 47
CXD84_RS14130 2911853 .. 2911876 -  -6.6  -3.05343   CGCAGATGTCCAACA          GACGGACGCC AAAC GTGGTCCGTC           TATTCCGTGGACGCC  49 25
        pcaF 2910511 .. 2910526 - -10.4   -5.1925   CCAGAACGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTGCCATGCCGG 100 54
        clpS 2909028 .. 2909046 -    -8  -4.19704   CAAGGCCAGGCAAAA             CGACGCGG CGA CCGCGCCC             GATGCGGATCAGGTC  74 34
CXD84_RS14105 NONE
        pbpC NONE
        clpA 2899224 .. 2899237 -  -4.5  -2.94747   GCAGGCGATCAGAGA               GCGTG GATC CACAC                GGTCAGTCGATCAGT  45 28
CXD84_RS14090 NONE
CXD84_RS14085 NONE
CXD84_RS14080 2895528 .. 2895556 -  -5.3  -3.16564   CGCGTACGGTATTAA        GGTTAACCCGTAT ACG AAAAAGGTTAACC        TTCTGTTTTCGCGTC  49 20
CXD84_RS14075 2891296 .. 2891306 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 292
CXD84_RS14065 2889081 .. 2889113 -   -17  -2.71712   GCGGCTGCGGCAAAT     GGCGGCGCAGCGCCC CGGG GAGC-CCGCGCCGCC      GGCACAGGCCGATCA  80 38
CXD84_RS14060 NONE
CXD84_RS14055 NONE
CXD84_RS14050 NONE
CXD84_RS14045 2885410 .. 2885439 -  -3.3   -3.9461   GTTCCGCAAGAAGAA       CCGGCGCCCGTGC GTGC GGACTGGCTCAGG        CCTCGACTTCGCCCA  58 21
CXD84_RS14035 2883341 .. 2883356 - -11.8  -5.86061   CCCCACCAAAAAAAA              CCGCCC CGAG GGGCGG               CTTGAAAATCGAACG 100 58
CXD84_RS14015 2877326 .. 2877338 -  -6.2  -4.15565   CCGACGATGGCAAAA                GCGG GCAGG CCGC                TGCCCAGATGGGTCT  66 211
CXD84_RS14005 2874416 .. 2874449 -  -5.8  -2.64616   GCGCCAGCCAGATGA     GCGGCGACGTGCTG GTGGTG CAGATCGCCGGCGC      GGCGCTGGCCATCGT  45 443
        cyoB NONE
        cyoC NONE
        cyoD NONE
CXD84_RS13975 2868429 .. 2868461 - -14.1  -3.53012   GCGCCCGGGCGCAAA     CGCG-GGCGGCGCG CTCAGC CGCGCCGTCGCGCG      CGCAGCTCGTGGCGC  78 7
CXD84_RS13970 2867652 .. 2867685 -  -5.1   -4.1899   GGATCGGATTGAAAA     GGGCGGC-CGCGCTCA GAC CGAGCGCGTGATGCCG     CCGTCGATGCGGATG  69 4
        hutG 2866638 .. 2866672 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS13950 2862927 .. 2862948 -  -7.9  -3.78419   GGAGGAAAGATACAA           GGCACCCCG TCAT CAGGACGCC            TGGTGCCTGCCCGCG  66 16
CXD84_RS13945 2861565 .. 2861583 - -13.8  -3.21099   TGTCCCCATGACGAA             CGGCCGCC GCG AGCGGCCG             TTTGCTTGTCTGGCG  73 173
CXD84_RS13930 2859070 .. 2859091 -  -2.8  -2.64616   CCGCCAGGTACAGCA           GGCCCTGG TTCATG CCTGGCCC            GCCGCGCAGGGCAGG  39 13
CXD84_RS13925 2858167 .. 2858196 - -23.7  -3.53224   GACTGCCGCGGCAAA       GGGAGCCTGTCCC CGCT GGGACAGGCTCCC        GGGTATGTAGTTACC 100 36
CXD84_RS13910 2855125 .. 2855142 -  -2.5  -2.57344   TACGCGGCGCACAAT             CCCGGGC TGAA GGCCGGC              GCGGCCTGGTACGGT  38 356
        moaC NONE
CXD84_RS13890 NONE
CXD84_RS13885 NONE
        moaB NONE
CXD84_RS13875 2847889 .. 2847916 - -21.4  -2.70932   TCGGGGGGTGAACGA        GGTGCCTGTCCC CGTG GGGACAGGCACC         TGCGGTGTCCCTCGG 100 138
CXD84_RS13860 2844267 .. 2844318 -  -9.2  -3.21099   GCCGCTGATCAGGAA CGGCGACCTGCGCGCGCTGGCCG TCACGAG CCGCAAGCGCTCGCCGG-CGCTG CCCGACGTTCCGGCC  56 292
CXD84_RS13850 2842334 .. 2842365 - -11.6  -2.81133   GACGCACCCAGCAGA      GAGCCCCGAC-TGGA CAA TCCGTATCGGGGCTC      TCGTTTGCGTGGGTA  63 238
CXD84_RS13840 NONE
CXD84_RS13835 2840538 .. 2840563 - -18.3  -4.55798   GAGGGGAAATGAAAA         GCCCCGCGCAA CACC TCGCGCGGGGC          AAAATAGTTTGTTAA 100 291
        gyrA NONE
        serC NONE
        pheA 2831005 .. 2831056 -  -4.5  -4.84761   ATACCTGCAGAAAAA CAATATGGCAG-CGCCG-GACGGA CACACGC TCCGTCACGGCGGCCGCC-TGGTG TGCGTCAACCACGCC  82 47
CXD84_RS13780 NONE
        aroA 2828748 .. 2828761 -  -3.1   -3.6692   GCGGATGCGAAAATA               GCCATG GGG CA-GGC               GCCGTTCAGTCCCGC  53 31
CXD84_RS13770 2828069 .. 2828079 -  -6.8  -3.91984   ATACTGCCGAAACAA                 CACG CGC CGTG                 GCTAGGCGCACCAGA  66 27
CXD84_RS13765 NONE
CXD84_RS13760 2825746 .. 2825775 - -16.6  -5.00616   GCCGGCCCGAAAAAA       CAAAGCCCCTTG AACAAG CAAGGGGCTTTG        CCGGTAGAACACCAA 100 67
CXD84_RS13755 2825263 .. 2825277 -  -3.4  -3.56092   CCACCAGGGTTCAAA               GTCCAC AGC GCGGGC               TCTCGGTAGGAAGTA  49 59
        lapB NONE
       rfaE1 NONE
        rfaD 2822093 .. 2822117 -  -4.2  -3.40597   CGGTGCACGCAAACA         TCCACCCGGGC AATT ACCCGGG-GCA          AATCCGCTACTTCAG  49 32
CXD84_RS13735 2821460 .. 2821470 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS13730 2820390 .. 2820412 - -14.1  -3.78934   TGCCGCCGATAATAA           CCGCCCCGG ATCGG CCGAGGCGG           TTTAGCCGCGCTGGC  83 69
        cysM 2819079 .. 2819128 -   -17  -3.01712   CTTCCTGGTCGAACA TGGCTGGCAGCGCGGCCTGC-CG GTGTT CGCGCCGGTCGCGCTGCCGGCCG ATCCGGCGCCGCTGG  82 361
CXD84_RS13715 2817281 .. 2817296 -  -7.5  -3.08006   AAATAACAATAATTA              CCCGG CGAAAC CCGGG               ACCGCATTGCACAAT  54 53
CXD84_RS13710 NONE
CXD84_RS13705 2815528 .. 2815547 - -16.4  -5.75945   ATGGCCGAAAAAAAA            CCGCGGGC GACA GCCCGCGG             CTTTCTCTCTGCGTG 100 52
CXD84_RS13700 NONE
CXD84_RS13695 2812744 .. 2812759 - -11.8  -5.86332   CCAAGGCAAAAAAAA              CGCCCC TTGC GGGGCG               TTCTCGCCGAAGCGG 100 46
CXD84_RS13690 2811470 .. 2811486 - -11.5   -3.5944   ATCGAGATGCCGAAA              CCCGGCA ATA CGCCGGG              GCGCTGGCGCCGCGC  72 95
        cysA 2808383 .. 2808416 -  -5.1  -2.71712   GTCGGGCCGGTAAAC     CGTGATGG-CGCGCCC GTA GCGCGTGGCCACCGCG     TCCAGCACGCCGAGG  45 264
        cysD 2806633 .. 2806644 -  -3.6  -3.90048   GGGTGTCGAAAAATA                GCGG TAGG CCAC                 ATCGATGGTGATGCC  59 330
CXD84_RS13655 2804112 .. 2804132 -  -4.5   -3.6215   CGAATGCATGTCAAA            CCACTGCCG CGA CGGGCGCGG            CCCCCTACCACTGGC  52 80
CXD84_RS13650 2803577 .. 2803592 -  -4.6  -4.62069   CTGCTACGGGAAAAA              GTAGGC ATAG GCCGAC               TGGCTGGCTGCCTGG  75 86
CXD84_RS13640 2801980 .. 2802031 - -22.6  -2.87132   GCTTTCTTCCAGATA TCTTTTCGCAATAAAAGGACACCC TTGC GGGTGCCCTTTTATTGCGGAAAGC CGTGCCAGACACAAA 100 81
CXD84_RS13635 NONE
CXD84_RS13630 2799763 .. 2799781 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 244
CXD84_RS13610 2795898 .. 2795930 -  -3.4  -3.80733   GGCAGGCCAGAATAA      CCCGGCGTTT TTAAATTTGCGTT AATCGCCGGG      CCGGCGGCGGCCGCT  56 69
CXD84_RS13590 2789592 .. 2789622 - -25.6  -3.55444   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 46
        aceE NONE
        aceF NONE
        lpdA 2776442 .. 2776465 - -18.2  -2.52464   CGCCGCGCCAACGCA          CAAGGGCCCC GCGA GGGGCCCTTG           TGCTGCCATGCCGCG  85 45
         tkt NONE
         gap 2768880 .. 2768922 - -21.4  -4.07568   GCCTGCCTGCGAAAA GGGCCAGATCCGTTTCCCCG TGA CGGGAAAACCAACCTGGCCC TTGCGCCCTGTTCAG 100 51
         pgk 2767420 .. 2767435 -    -6  -3.01712   CCGGGCCGCTCAAGA              CCCGCG CCGC CTCGGG               CATCACCGGCTTCGA  48 227
CXD84_RS13465 NONE
CXD84_RS13460 2757481 .. 2757497 -  -2.1  -3.01712   CCGGGCGCGTCAATA              GGCTTGC TGC GCATGGC              ATGGGTAGCAAGAGA  41 68
CXD84_RS13455 2756085 .. 2756119 -  -6.3  -3.64487   CGACACGGCCAAGAA    GGTCGCGCGGCTGGAA GGCC TGCCGG-CGCGCGAGC     GCGCCGACTTGCAGC  57 456
CXD84_RS13445 2754194 .. 2754219 -  -3.9   -4.7416   TGAAAATCTGAAAAA         CGGCGCGC-CCA CTA TAGCGCACGCCC         TATTGCCGGGCGGCG  77 25
CXD84_RS13440 NONE
CXD84_RS13435 2752724 .. 2752734 -  -8.2  -3.02511   CCGACCGGCTGAACA                 GCGC CCG GCGC                 GCGTTCGGCCTCGGC  55 264
CXD84_RS13420 2750709 .. 2750733 -  -7.8  -3.93369   TGAACCTCAAGGAAA          TCGGCGCCGT GCTCA ACGTCACCGA          GGCGCGCGTGTGCCA  67 436
        flhD NONE
        flhC 2748675 .. 2748715 -  -4.6   -2.7386   AACCGACGCCAATGA TCCCCCCTGACCCGTCG GGCAAAAA CG-CGGGTTATGGGGGG  TTTTCTGGTGCTTTT  43 64
        motA NONE
        motB NONE
CXD84_RS13390 NONE
        cheA NONE
        cheW 2743769 .. 2743791 - -12.7  -3.90856   AAGCGTTGAACGAAA          CGACGGGCGG CGCA CCGCCCG-CG           GACTGACCGCCGTCA  82 38
CXD84_RS13375 2741531 .. 2741541 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 508
CXD84_RS13360 2740482 .. 2740492 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS13355 2739158 .. 2739196 -  -6.7  -3.54459   GGAATGCCCGGCAAA  CAGCAGTCCGCCCGGCTT GAGC AAGG-GGACGAACCGCCG   CAGGATCCTGGCCTG  58 307
CXD84_RS13345 2737977 .. 2738016 -  -2.1  -4.43909   ACTCCAAGAAAATAA TGTCCGGACGC-CCGCTCC GTTG GGACCGGGGCGTC-AAACG  CGATGCCCGCGGTCG  67 19
        cheY NONE
        cheZ 2736728 .. 2736746 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 206
CXD84_RS13310 2733744 .. 2733767 -  -6.6  -3.68351   TGCGCACCATGGAAA          CGGCGCGCCCC ATG GTGGC-CGCCA          CCAACACCGGCATCA  61 231
        dacB NONE
CXD84_RS13240 2718111 .. 2718125 - -11.4  -6.34424   GCGGCAAAAAAAAAA               CCGCCT GCA AGGCGG               TTTTCCTGTGGGCGG 100 59
CXD84_RS13235 2716731 .. 2716755 -  -3.4  -3.34398   GTCGTGCGCGAAACA         CGCG-CCGGTC CTGT GCCCGGTCCCG          CCCCGCAGGCCAGGG  46 77
CXD84_RS13220 2711318 .. 2711361 -  -8.6  -2.66316   GCGTTCATCATACCA GCCGCGCCCCGCGCCACGCA CCCC CGCGTGCTACGGGGTGCTAC TTCAATTGCGTAATC  52 22
CXD84_RS13215 2710911 .. 2710963 -  -7.4  -3.66999   ACCGATCTACGCAAA CCCATTGTGCATGCCGGGGCGGAC GCGCG GCCCGCCCCGCCGTGATCAGCGGC GGCTGATCAGCAGGC  63 18
CXD84_RS13210 NONE
CXD84_RS13205 2709999 .. 2710020 -    -5   -3.7282   GGACGCCACCAACAA           GTGGCCGG GCGAAA CCAGCCGC            GAATGGGGCACGCCC  58 146
CXD84_RS13195 2707223 .. 2707243 -  -3.1   -4.4017   CCAAGGTCGAGAAAA            TGGCCGCCA GCC TGGCGATCT            GCGCGCCCACGCTGG  68 422
CXD84_RS13180 2705456 .. 2705472 -  -4.4  -3.27704   AGCTGCGAAAGTGAA             CGATGCG GCAG CGCA-CG              CCGGAAAGATGCTAC  49 89
CXD84_RS13175 2702859 .. 2702873 -  -3.4  -2.62184   CGGCCCGGTACACCA               TGCCGG TCT CCAGCG               AGGCCCACAGCCGCC  39 283
CXD84_RS13165 2701230 .. 2701264 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 221
         ppx 2691125 .. 2691159 - -21.4  -2.52464   GCTCCCCGGAAGTCA     GCGGGAGCCAGTCCCC TTC GGGGACAGGCTCCCGG     AGATCGGGTTTCAGG 100 36
CXD84_RS13090 2684297 .. 2684322 - -10.3  -3.53012   GCGGCCCGCCTGAAA         CCGGCGGGCCC GTCC AGGCCGGCCAG          ATCAAGTACTATCGC  67 34
CXD84_RS13085 2682821 .. 2682835 -  -5.6  -3.02144   CCAGGCCGCGCAACA               TGGGCC CCA GGCTCA               TGCCCTGCGCGTCGG  47 419
        dusA 2679243 .. 2679277 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGAGCTTACGC  50 191
CXD84_RS13040 NONE
CXD84_RS13035 2674739 .. 2674749 -  -3.2   -3.7614   AATCAGGACGAACAA                 CTGA CTT CCAG                 CCCAGCTGCCCAGTC  56 2
CXD84_RS13030 2673677 .. 2673708 -  -9.4  -3.03243   ACGGATCTTCGAAGA      GCATTAC-CGGCGGG CCG CCCACCGCGAAACGC      CCGGCAGCGGACTGG  55 174
CXD84_RS13020 NONE
CXD84_RS13015 2668861 .. 2668883 -  -5.5  -3.72324   CACCTCCAGGAAGAA          CAGGGCGTCC ATCA GGCCGCC-TG           CGCCGCCAGCCGGCG  57 14
CXD84_RS13010 2667761 .. 2667780 -  -6.4  -3.73775   CCCAGGCCCATGAAA            GCC-GCCTG CCC CAGGCTGAC            CAGCCCGGTATAGCC  59 239
CXD84_RS13000 NONE
CXD84_RS12995 2665159 .. 2665173 -  -3.5  -2.78384   GCGCGCGTCATGACA              GCCAGC GCTT GC-GGC               GCTTGTAGTGCTTGA  41 3
CXD84_RS12990 2663243 .. 2663264 -  -2.9  -3.12351   GCGCTGGATACGCAA           CGCCGGACCG CGC CGGTACG-CA           CCGCCACCTGCCTGC  44 50
CXD84_RS12985 2662076 .. 2662113 -  -7.6  -2.73364   GGTCGAGGCCAAGGA   CGCCGGCGACGAAGAA GCCATG TACTTCGACGCCGACT    ACATCCGCGCGCTCG  49 490
CXD84_RS12950 NONE
        lolD NONE
CXD84_RS12940 2653205 .. 2653236 -  -4.2  -3.78775   GCGGGCAGGAGGAAA      CAGGGGCCCGG-CGC CGG ACGGCCGGGCGTCAG      GGCGTCGCCGCCCTG  57 22
CXD84_RS12935 2649613 .. 2649637 - -12.8  -6.34424   GCGGCAAAAAAAAAA          CCGCCAGTCG ATACA CGACAGGCGG          CCAACAACGGGCGGA 100 109
CXD84_RS12930 2649096 .. 2649114 -  -3.8  -3.60762   GAGTGGCCAAAAAAG             GCGAAGTC GCT GACTTGAC             GAGGATTTCGCCTAC  51 187
CXD84_RS12925 2645020 .. 2645048 -  -9.4  -2.87132   CCTGCTCGCCAGACA        GTGGGAGGCGCC CCATC GGCGCCCCCCGT        CTTACGGCGCTTAGT  56 36
CXD84_RS12915 NONE
CXD84_RS12910 2640353 .. 2640367 -  -2.7  -3.02263   AGAGGTCCTGCAAGA               CCTCG GGTAG CGCGG               CTTCGCCGCGCTCCG  42 53
CXD84_RS12905 2639439 .. 2639462 -    -8  -3.09015   TGCATAGGGATTCAA          GGGCAGCCGG GGCG CCAACGGCCC           GGCGCGAAAGGCGCG  54 43
        greB 2638608 .. 2638642 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 241
CXD84_RS12870 2631206 .. 2631224 -  -5.2  -4.42081   AACATAAAGGGAAAA             CCCGCAAT TTT ACTGCGGC             CCGCTTCCCTGCCTG  72 16
CXD84_RS12860 2627804 .. 2627838 - -10.6  -4.28994   TACGATGCAGGAAAA     CCTTCCGCGACACGGG CTT CCCGTTTAGCGGATAG     CAGGGGCAGAAGGCA  89 267
CXD84_RS12855 NONE
        odhB 2623536 .. 2623592 - -12.9  -3.74693   CCGGATTCGACGAAA CCGGCAGGGCCGCC--GGGC-GGGCCGC GATG GCGGCCCGGCCCTTGGCGGCAGCGACAG AAGAAGGCATTCTTC  79 58
        lpdA NONE
        zapE 2620674 .. 2620690 -  -3.5  -3.14132   GGCCTGCCGGAGGAA              GTCGCCG CCA CGGTGGC              CTTCCTGGCTTCCGA  45 114
CXD84_RS12830 2618818 .. 2618852 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS12785 2611179 .. 2611207 - -19.6  -2.53876   GCTGATCGCAACGCA       GGCGCCGC-CCCG TCAT CGGGTGCGGCGCC        TGCGTCGTTGCCCCG  93 67
CXD84_RS12775 2606516 .. 2606534 - -11.6  -3.91911   CGCAGTCCAAGGAAA             GCCCGGCC CCA GGCCGGGT             TTTCCTTTTGCGCGG  81 44
CXD84_RS12765 NONE
        pgeF NONE
        phaC 2602112 .. 2602131 -  -4.8  -3.61894   AACGCCCGCCAAGAA            TGCCGGCC TTGC GGCCCGCG             CGCGTACTCAAACCG  52 33
        phbB 2601287 .. 2601315 -  -9.6  -3.04263   ATTTTACGTGTAATA       CCGGGCGTCCG CTTCCCCC CGGAC-CCCGG        CCCCCTCCGAATGCG  57 44
        phaR 2600610 .. 2600629 - -16.4  -4.24204   GACTCATACGGAAAA            GGGGCGCC CGTG GGCGCCCC             TTTTCCTTCAGCCAG 100 52
CXD84_RS12740 NONE
CXD84_RS12735 NONE
CXD84_RS12730 NONE
CXD84_RS12725 2597301 .. 2597315 -    -7  -2.79183   GGGACCGCCACCATA               CCGCGC CGC GCGTGG               CCGCGCTACCAGATG  48 31
CXD84_RS12720 2596317 .. 2596327 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS12715 2595277 .. 2595317 - -16.2  -2.71011   ATGCCTTGGCAACGA  GCCGGCGCGGCGCTAT GGTATGCGG ATAGCGCCGCGCTAGC  TGTGAACTGTCAATA  77 21
CXD84_RS12670 2587388 .. 2587434 -  -5.1  -2.97188   GGACAGGACGAGACA TGGCGCGCCACGCAGGCTCGA GGCCGGT CCG-GCCCGCGCATC-CGCCA GGGATGCGCGCGAGC  47 111
CXD84_RS12665 2586452 .. 2586498 -  -5.1  -3.29461   GAAGTCTTTGCATAA CCCTAGGATACGCCATGCGCCGC GGC GCTATGCCTG-CGCATCC-AGGG CGGCCGCGCCGATCC  51 6
CXD84_RS12660 2586160 .. 2586201 -  -4.3  -4.08216   CCAGGTCGGCGAAAA CCGGCTGACCATGATGTCGC AAG ACGGCACCCTGCCCAG-CGG CCCGTTGGCCGAGCA  60 73
CXD84_RS12650 NONE
CXD84_RS12645 2584115 .. 2584155 -  -6.6  -2.78596   TACCTCGTGACGATA CGGTG-CGCCGGGCGGCCG ATGG CGGCCGCCGGATGGCTGCG  CCTATGGTAGCCCGG  47 111
CXD84_RS12640 NONE
CXD84_RS12635 2583492 .. 2583515 -    -3  -4.07568   CGGCCGCGCGGAAAA          GAGCCAGC TTACCATC GCCGGCGC           GGCGCAGAAGGTCAG  59 37
CXD84_RS12630 NONE
CXD84_RS12625 2582241 .. 2582270 -  -7.7  -3.21395   AGCTGCTGGACAAGA       GCTGCGGCGCCGAG GCG CAAGGCGCCAC-GC       GGCTGGCGCGGGGGC  53 277
        clpB 2577607 .. 2577630 - -13.2  -5.48063   AGCGAACAGAAAAAA          CCCCTGG-TCC ATT GGATCCAGGGG          TTGAGAGACGCGGCG 100 69
CXD84_RS12590 2571756 .. 2571789 -   -11  -2.68942   AGCGCCGGACAGAAC     CCCGATACGCCGCGC CTGGT GCGCGG-GCATCGCG     TCGACACCCTCAAGC  59 388
CXD84_RS12580 NONE
CXD84_RS12575 NONE
CXD84_RS12570 2568580 .. 2568612 -  -9.7  -3.05463   ATGTGCGGCAGGCAA      CCCTGCCGGCGGG CTGCCGC CCCGCCGGCCGCA      ACAGCCGCGCCTGAC  57 47
CXD84_RS12560 2566107 .. 2566128 -  -8.6  -5.47218   GCGTAGGGAAAAAAA           GCAGGCGC GCTCAG GCGCCGGC            GCGCAGCACCTGGCC 100 14
CXD84_RS12555 2564743 .. 2564758 -  -7.5  -3.14132   GCGCGCCCTCATCAA              GGCGC GCCGCA GCGCC               GGCCACGGGCGCAAC  53 377
CXD84_RS12525 NONE
CXD84_RS12520 2558758 .. 2558769 -  -7.2  -4.15565   TTGAGTACCGTAAAA                CCGC CCAG GCGG                 GCCCACGAAACATGT  67 77
CXD84_RS12515 NONE
        crcB 2557756 .. 2557798 - -13.2   -3.6502   CACGCCGGACTGAAA CCTGGCGCCCGCCGCCGGGC TCA GCGCAACAGCAGGCGCACGG TCGCCAGCCCCAGCC  79 3
         alr 2553437 .. 2553460 -    -8  -2.56596   TTGCGTAGCAATTCA          TGCCAGCAGG CCGG CCCGCCGGCG           ATCCGCACAATGCTC  50 39
CXD84_RS12485 2552394 .. 2552416 -  -5.5  -4.45399   ACAGCAACAGGAAAA          TCTGGCGGCG TCAG CGC-GCCAGC           GTGACGATCCGGCCT  72 215
CXD84_RS12475 2550610 .. 2550656 - -12.9  -2.73875   CGCCGCCGAACACGA GCAGCCCGAGGCGCGGCTA TCCGAGTTC CAGCAGCGCCGCCGGCTGC AACTGGCCATCGAGC  63 213
        radA 2546969 .. 2546979 -  -4.6  -3.13299   CCAGCAGACTCAAGA                 CAGG CTC CCCG                 GACGTGCCATCAACG  47 35
CXD84_RS12455 2546079 .. 2546099 -  -6.7  -3.58905   AGCCCGCACATACAA            GGCGCGGCA AAA TGCCGCGTG            ACCTATAATTCGTTG  58 119
CXD84_RS12450 2545516 .. 2545537 -  -2.1  -3.53012   CGCTGGTGCTGCAAA           CCG-TGGCGC TGG GCGGCGTCGG           CCTGCTGGGAGGATG  47 295
CXD84_RS12415 NONE
CXD84_RS12410 NONE
        maiA 2537538 .. 2537559 - -17.3  -5.67063   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 45
CXD84_RS12395 2537133 .. 2537154 - -12.3  -5.09762   AGCGCAATACAAAAA           GCCGCTCAC TTGC GTGAACGGC            CCTTTTGTGTCGACG 100 77
CXD84_RS12385 2535129 .. 2535149 -  -6.7  -4.14392   CGGCAACCTGGAAAA            GACACTGGC CGC GCCCGTGAC            CGTGATCGTCGCCCA  69 417
CXD84_RS12375 2533790 .. 2533816 - -12.2  -3.85698   GGCCGCCCGGACAAA         CCGGTTTGGCGT CGC ACGCCAGGCCGG         CTGTAATGTCTTGAT  81 92
        scpB NONE
CXD84_RS12360 2529612 .. 2529631 -  -9.3     -6.13   ACACTCAAAAAAAAA            TGGGCTG CACGCC CAGCCCA             CCGTATTGCCTGGCC 100 453
        rimP NONE
        nusA NONE
CXD84_RS12345 NONE
        rbfA 2524102 .. 2524131 -    -5  -2.60341   AAGGAGAAAAAGCAG       CGACGA-CAGCCC GGTCA GGACTGGTCTTCG       GGCTCGTCGGGAACA  42 10
        truB NONE
        typA 2521433 .. 2521459 - -22.4  -4.65895   GGCTGCATGTAAAAA         GGGTTGTGGCCG CCA CGGCCACAACCC         TTGCGCTGGCACCGC 100 66
        polA 2516723 .. 2516748 - -17.5  -2.69151   GGCTGTCAGACAGTA         TCCGGCCGGCG CGGA CGCCGGCCGGG          GCCGCATCAGTGCGC  80 32
CXD84_RS12305 NONE
CXD84_RS12300 2514932 .. 2514957 - -21.9  -2.52676   GACGCGGGCAACTGA         GGGCCTGCCCG AGCA CGGGCAGGCCC          CGGCCCGCTACAGGT 100 33
CXD84_RS12290 2511568 .. 2511619 -  -7.2   -4.8048   GGGGTAGAGGAAAAA CTCTAACCC-CGGGTGCCTGTCCCC GCA GGGGACTGGCACCCGCAAACTCCAA CCCCGGCGTGCCTGT  84 117
CXD84_RS12260 NONE
CXD84_RS12255 NONE
        parC 2497397 .. 2497412 -  -8.2  -3.22475   TTCACGCTCAGAACA              CCGGCG ACAG CACCGG               CTGCCTGGGACGCAC  58 2
CXD84_RS12245 2495972 .. 2496006 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS12220 2492322 .. 2492350 -  -8.7  -3.29144   CTACGTGCTGGAGAA        CGGCCGGGTGGTG CTG CACGACACGGGCG        CCAACCTGCTGGTCA  59 157
        ugpB 2483147 .. 2483177 - -21.1  -3.18118   CCAGGTGAGAATACA       GGCGGCCGGCCGG TAATG CCGGCCGGCCGCT       ACAGGCACAGGCCAA 100 145
        ugpA NONE
        ugpE NONE
CXD84_RS12155 2480117 .. 2480150 - -17.3  -3.44325   ACGTCGTACAAGTAA     GGCGCATGCGCGCGG CTCG CCGCGCACGGGCGCC      TGTCCCCGCTGCGGC  87 102
CXD84_RS12145 2478098 .. 2478108 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS12125 NONE
CXD84_RS12120 2475218 .. 2475276 -  -2.9  -4.56597   GCCTTGCGCCAAAAA TCCCATTGTGCCGCAC-GGGCCGCGCGGC CGG GCCG-GTAGCCCTGCGCCCGGCAAGGGGA TCAGGCTGCCGCGGG  69 76
CXD84_RS12115 2474304 .. 2474336 -  -9.7  -3.06671   AGATCGACCGCAACA      TGGCCATGCTGGGCG TGA CGCGCTGCACCGCCA      TGGCGCCCGGGCTGC  59 67
CXD84_RS12055 2464567 .. 2464595 - -10.1   -2.9348   TGTAAATTTTACATA        GGGTGTGGCGCGG TCG CCGCGCCCTAGCC        GCCGTGCTGCGCGTC  59 20
CXD84_RS12050 NONE
        arsC 2462476 .. 2462507 - -24.5  -3.90112   CGGCCGTCAACGAAA      GCGGCCTGGCGCG TCTTGC CGCGCCAGGCCGC       AATCACTCGCCCTCA 100 70
CXD84_RS12010 2457235 .. 2457266 -   -10  -2.81547   CCTGCAGATCAACTA      TGCGCTGGACGACC GCCA GGCCGCGCAGCGCC       TGTTGCCGCTGGCCC  56 306
CXD84_RS11980 NONE
CXD84_RS11975 2451656 .. 2451699 -  -8.3  -2.51133   GAGTCATCCACGAAC GCGATCGAGGTGAGCAGCTCCA CGC TGGA-CTGCG--CCTCGACCGC CTGCATCACGTGCAG  51 258
CXD84_RS11930 2431700 .. 2431757 -  -7.7  -3.07113   GATCAGTCCAGCCAA CGCAACCGGGGCCAGGGCGC-GCGCCGCT CGTG AGCCCCGCGGCGCCC-G-CCGCG-CTGCG CTATGTGGACGACAG  53 66
CXD84_RS11905 2427343 .. 2427366 -  -8.8  -3.53012   GCCCGGCGCCGCAAA          GC-GATGGCGC AGG GCGCCAGCTGC          GGCGGCTGTTCGCCG  61 350
CXD84_RS11880 2424269 .. 2424301 - -12.7  -2.73875   CCTCGGCGAACACCA     GGCC-GTCCGGCCC CAGTTC GGGCAGGACCGGCC      GCGCCGCGCCAGGCG  65 244
CXD84_RS11870 2420672 .. 2420704 - -10.5  -3.05963   ACGTGCAGGTCAATA     CCCTGCGCGCCGCC CTGCCC GACGGCGCGC-GCG      TGGGCACGGTCGACA  59 285
CXD84_RS11855 NONE
CXD84_RS11850 2414738 .. 2414753 -  -4.6  -3.41051   CTACTTCGACGAGAA              CCGGCG CTTC CACCAG               GCCATTGCCGATCTC  52 291
CXD84_RS11840 NONE
CXD84_RS11835 NONE
CXD84_RS11830 2410253 .. 2410265 -  -3.3  -2.64243   GGATATGCGACAGCA                GCTTC ATG GACGC                GGCTCCTGCGGGGCT  39 16
CXD84_RS11825 NONE
CXD84_RS11820 2407681 .. 2407705 - -13.5  -3.21416   CAGCGCCATGAGCAA          GGCCGGGCTGG ACG CCAGCCTGACC          GCCGTCGGCCCGCCG  72 427
CXD84_RS11800 NONE
CXD84_RS11795 NONE
CXD84_RS11790 2401698 .. 2401734 -  -9.4  -3.02511   GGTAGCCGGCCAAGA   CGGACGGTATCTGTCCC CGCA GGGACAGCCAGCG-CCG    GCGACGGGCTACTTC  57 34
        flhB 2394351 .. 2394390 -  -3.5  -3.67296   CAGCACCGAGGGAAA  CGCGGCGAAATCCA-GCG GCTTG CGCGTGAACATCGCCACC  AGCAGGATCATCACC  54 199
        flgB NONE
        flgC NONE
        flgD NONE
CXD84_RS11710 NONE
CXD84_RS11705 2384331 .. 2384361 -  -2.2  -4.32034   GCATCATGATGAAAA       CTCCTGGCGCGGCG CTT CGGCGCGCGCGTTG       ATAATCAGCTGGCCG  65 30
        flgG NONE
CXD84_RS11695 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 2377333 .. 2377358 -   -14  -3.05384   CCGCTTTCCATCGAA         CACGCGCTCC TCGAGG GGAGCGCGCG          CCATTTCCCGACTAC  72 57
CXD84_RS11670 2375456 .. 2375467 -  -2.2  -3.68853   GCAAAAACCGCCAAA                CAGA ACTA TCCG                 GCCGCCATTTCGCCC  51 49
CXD84_RS11665 2373649 .. 2373684 - -22.6  -4.56597   CGCTGCCTGTAAAAA    GACGATCCGGCGCGGC GCTG GCCGCGGCGGATCGCC     GCTTTCCCGTCCTGG 100 92
CXD84_RS11660 2372093 .. 2372108 -  -4.6  -3.78419   GGAGGAAAGATACAA              GGCACC CAGC GGCACC               CGACGGCACCCGACG  58 47
CXD84_RS11655 2370851 .. 2370877 -  -2.9  -3.90744   CTGGCGGGCAAATAA        CCCCTTCGGG TGCCTGTC CCCGC-GGGG         ACAGATACCGTCTTG  58 45
        fliE 2357504 .. 2357525 -  -7.2  -2.88544   CTGGATGCCCATATA           CCGCCGCA ACTCTA CACGGCGG            TGGCCGAGCTGCTGG  50 518
CXD84_RS11525 NONE
CXD84_RS11520 2350814 .. 2350830 -  -3.5  -3.31415   GACGACGAAATCGAA              GCCGGTC ACT GTGCGGC              GATGAAACCGTTGTC  47 14
CXD84_RS11515 NONE
CXD84_RS11510 NONE
        rpsB NONE
CXD84_RS11480 2341413 .. 2341447 - -13.5  -3.83144   GTAAGACAAGAAATA    GGCCGGC-AGTTCGGG AAGC CCCGCCCTGGCCGGCC     CCTACGATGACGCGT  83 40
CXD84_RS11475 NONE
CXD84_RS11470 2340021 .. 2340072 - -10.8  -3.10344   CGCGTACGGAACAGA TTCCGATATCGACACCGGAGCCGT CGAT ACGGCCCCGATACCTCAACCGGAA TTATACGGTCATGAT  64 26
        uppS NONE
CXD84_RS11460 NONE
CXD84_RS11455 2337055 .. 2337083 - -10.1  -3.59979   CGGGTGGACGCGAAA        GGCGGCCCGGCGC GTC ACGCCAGGCCGAG        ATTGCCGGCGAATGA  67 11
        rseP NONE
        bamA 2333233 .. 2333266 -  -2.9  -3.72893   TATTGTGCCACTAAA     CTGCGGGACGGCCGG GCAA CCGGCCATTTCCCAT      GTTTTCATGCGTAAC  53 65
CXD84_RS11440 2332603 .. 2332613 -  -2.4  -2.64218   AGGGTCCAGCAGAAC                 CGGC ATG GGCG                 TGCTTATCGGCCCAG  38 29
        lpxD NONE
        fabZ NONE
CXD84_RS11425 NONE
CXD84_RS11420 NONE
CXD84_RS11415 NONE
CXD84_RS11410 NONE
CXD84_RS11400 2324250 .. 2324270 -   -14  -5.40072   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 46
CXD84_RS11390 2322925 .. 2322944 - -10.6  -3.09015   TTCACAGCTAGTGAA            GCCTGCCG TCGC CGGCGGGC             AAGGTCATGGTTACG  64 36
CXD84_RS11380 2320892 .. 2320915 - -17.4  -3.59979   GGCGCGGACGCGAAA          GGACGCGCCG CGGC CGGCGCGCCC           GGGTCGAACCTCACG  89 36
CXD84_RS11375 2319678 .. 2319698 -  -9.7  -3.67622   CAGCGCGAAAAGGAA            CGTGTCCTG AAG CACGACACG            CGCGTCAACCAGCGC  68 30
CXD84_RS11365 NONE
CXD84_RS11360 NONE
CXD84_RS11355 2317249 .. 2317262 -  -2.4  -2.62616   GGACGCTCGACATGA               CGTT AACGTA AACG                TAAGTCGTTGGCGAG  38 129
CXD84_RS11350 NONE
CXD84_RS11345 NONE
        mmsB 2313864 .. 2313880 -  -4.3  -3.08464   GTATCAGGCATGCAA              GCCTCTC GCG GAATGGC              CCTGGCCGCCCGGCC  47 50
CXD84_RS11335 2313408 .. 2313435 -  -6.8  -2.90075   GGCGCGCCAAGTATA        GGCCGCCGCGCC GTTC AACGCGGCGTCA         CCCGCACCGCGGTCA  50 12
CXD84_RS11330 2312460 .. 2312494 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 204
CXD84_RS11310 NONE
CXD84_RS11305 2305969 .. 2305996 - -14.2  -6.15828   GGCACCAAAAAAAAA        CCCATCC-CGGCA TGG CGCCGTGGATGGG        GCGGACGTTCGAGGC 100 47
CXD84_RS11275 2299348 .. 2299358 -  -4.6  -3.07113   CACCAGGTCATCCAA                 GCCC ACT GAGC                 CCCCTATTCGCGAGT  45 156
CXD84_RS11270 2299037 .. 2299047 -  -2.6  -3.57144   CGCGCCACCTGGAAA                 TAAT CGG ATTA                 CATCTGCAAGCGCTG  48 23
CXD84_RS11265 2297956 .. 2297975 -   -10  -4.07568   GGCTTCGCGCGAAAA            CGGGGTTA CGGT CAACCCCG             ATTATGACACTGCCG  78 27
CXD84_RS11260 NONE
CXD84_RS11255 2295957 .. 2296005 -  -8.6  -2.62184   GGCCGCTGGACACCA CGATCGCGCGC-CTGGCCGCGCC CGTC AGCCCGGCCTGAACGCGCGGCCT ATTTGGCGGCCTGGC  52 24
        apbC NONE
CXD84_RS11230 NONE
CXD84_RS11225 NONE
CXD84_RS11220 NONE
CXD84_RS11215 2288242 .. 2288259 -  -8.4  -3.29829   TATAGCTTCCGACAA             CCGCAC GCCATG GTGCGG              TGCCCGCATGCAGCA  58 88
CXD84_RS11210 2287946 .. 2287960 -  -5.6  -3.13403   TCTTGGTCAGCAACA               TGCCGG GCT CCGGTA               TCAAACGAGGGTGGT  49 26
CXD84_RS11205 2284458 .. 2284480 -  -3.2  -3.01712   CGCGGGTGCGGAAGA           TGTCGGCCAC CAC GTCGCCGTCG           CCGGCCAGCAGCGCC  42 522
CXD84_RS11195 NONE
CXD84_RS11190 NONE
CXD84_RS11185 2282484 .. 2282534 - -10.2  -3.61398   TTTCGCGCGCAAGAA GGTCCGGCGCAC-GCGCCCGGCC TGAGGC GGCCGGACGCCGCGCGGCTTGCC GCCCGGGCTACTGGC  67 33
CXD84_RS11170 NONE
CXD84_RS11165 2278858 .. 2278878 - -16.9  -4.07687   ACGCCCCGTGCAAAA            GGCCACGAG TGT CTCGTGGCC            TTTGGATTTCGTGCT 100 121
        leuC NONE
        leuD 2276573 .. 2276609 - -18.6  -3.37556   GGGAAAACAAGGCAA    GGGCCCGCCGCGCGCG ATCAA CGCGGACGGCGGGCCG    GCAGGCAACGCGTCA  93 38
        leuB 2275400 .. 2275416 - -10.1  -4.58685   AAATTGTGCGAAAAA              GCCGCAA AAA TCGCGGC              CCTTGCGCACAGTGG  93 73
         asd 2274080 .. 2274136 - -11.8  -4.07568   CCTTGCCGTCGAAAA CGGCGCGCCT-GC-G-A--CAAGGGCGCC CGCG GGCGCCCTTGTATCCTGCCATGCGCGCCG GCGCCGCGCGTCAGG  82 36
CXD84_RS11140 NONE
        truA 2271460 .. 2271472 -  -4.7  -3.61398   CTGGGTGTGGAAGAA                TGCGC TGA GCGCG                GACCGTTTGCGTAAA  52 130
CXD84_RS11130 2270333 .. 2270349 -  -6.5  -3.53012   CGCGTCGCGTCGAAA              CGGGG TTATTTG CCCCG              CGCCACCGTCGCCAT  56 14
CXD84_RS11125 NONE
CXD84_RS11120 NONE
CXD84_RS11115 NONE
CXD84_RS11110 2266988 .. 2267008 - -15.5   -5.1101   CGATCAGGCAAAAAA            CGCCAAGTC AGC GACTTGGCG            TTTTCCGTTTCGATA 100 62
CXD84_RS11105 NONE
        yaaA 2264888 .. 2264925 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
CXD84_RS11095 2263190 .. 2263204 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  61 494
CXD84_RS11070 2258983 .. 2259010 -  -7.6  -3.88291   GATGACTCCTAGAAA        CGGGCCGCATTG TACG CGATCCGACCCG         AGTTGATCTCAATCC  66 34
CXD84_RS11065 NONE
        plsX 2257674 .. 2257690 -  -4.4  -3.14211   AGCTTTTTCCATCAA             GCGG-TG TCCC CAGCCGC              GCCGGGCGCGACGGC  47 5
CXD84_RS11055 2256637 .. 2256684 - -11.9  -2.50816   TCGGTATGGAGGAAT GGCGG-CGTGCGCGGT-CGCGCA CAGG CGCGCGCAGCGCGCCCTTCCGCC TACATGCGGGCCAGC  61 25
        fabD NONE
        fabG 2254872 .. 2254905 - -12.3  -4.03234   GCGTTTCCACAGAAA     CGCGCGGCTGGGC TTGGATGG GCCGCGCCGCGCG      CTTCTCACTATTGCA  83 33
CXD84_RS11040 2254424 .. 2254444 -  -4.5  -3.55563   ACGGCATTCCTGAAA            CCGCCCCGA TTC CCGGCGCCG            CCCCGAAGTGTTCGA  52 72
        fabF 2253054 .. 2253088 -  -6.5  -3.69216   CGGTTATCGAAAATA    CCGC-CGTCCGGGTTCA ACT CAAACCCG-ACGAACGG    CCATCGAACCGTTGG  59 9
CXD84_RS11030 NONE
        rpoE NONE
CXD84_RS11020 2251453 .. 2251466 -  -2.3  -3.54408   GCGCATGTAAAGCAA               CGGTG TCAT CAACG                TCCTGCTCCGGCGTC  48 20
CXD84_RS11015 NONE
CXD84_RS11010 2248817 .. 2248841 - -22.9  -4.65895   CGGGCGAGCCAAAAA          CGAGGGGGCGC CAT GCGCCCCCTCG          TTGCGGCAACCAGCC 100 62
CXD84_RS11005 NONE
        lepB 2246056 .. 2246069 -  -3.7  -3.17392   TAGCGGTCAATGGAA               GCGGC CAAT GCGGC                TCAAATCGCTGAAGT  45 3
CXD84_RS10995 NONE
CXD84_RS10990 NONE
        recO NONE
CXD84_RS10980 2242715 .. 2242741 - -15.9  -3.14344   GATGTCGCGGACGAA        CAG-GCCGCGCG GGCC CGCGCGGCGCTG         GGCGCGCTGGGCATC  80 157
        lptF 2234038 .. 2234063 -  -6.1  -3.01791   ACGTGCTGCCCAACA         GCCAGGTGGTGC TGC GCAGCACC-AGC         GTCATCGCCCAGTAC  48 280
CXD84_RS10925 2231932 .. 2231945 -  -2.3  -3.14132   CTTGCCGCCGATCAA               TAGCG ACTT CGCTC                ATTTCTCTGCTCCTC  42 124
        mmsA 2230369 .. 2230392 -  -8.2  -3.15544   CTGCAGGTTCATGAA          TTGGCCCCTGT TAG AC-GGAGCCAA          TTATAAGTAATATAG  56 98
CXD84_RS10915 2229212 .. 2229246 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS10905 2227746 .. 2227763 - -14.1  -4.41895   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 77
CXD84_RS10890 2224208 .. 2224254 - -21.5  -2.62184   TGCTGGTGTAGAGCA GCCGGCGCTTGCCGGCGCGCGC ATCG GCGCGCG-CGCCCAGCGTCGGC ATGGTCAGCATGATG 100 294
         acs 2220891 .. 2220921 - -14.7  -4.17089   TGCAAAGCCGGAAAA      GGCACGGGCCGGTC ATGC GACCGGCCCG-GCT       GGCTACAGACTGACG  95 101
CXD84_RS10875 NONE
CXD84_RS10870 2218910 .. 2218935 -   -14  -3.28712   GCGGGCGGCTGAGAA         CGC-GCCGCGC TCAGC GCGCGGCCGCG         CAATGCCCGCGTACC  75 10
CXD84_RS10845 2213762 .. 2213801 - -14.2  -3.62597   GGTACGCGTGAAGAA  GGCCGGAATGCCG-GCGCC GCC GGCGCGCAGCTTCTCGGCC  AGCGTGCCCTGCGGC  80 439
CXD84_RS10835 2212705 .. 2212722 - -14.1  -5.75945   ATGGGCGAAAAAAAA             CGCCGGC TAAC GCCGGCG              CCTTACATACAAAAA 100 51
CXD84_RS10830 NONE
CXD84_RS10825 NONE
CXD84_RS10820 2208693 .. 2208716 -  -2.3  -4.71426   GGTTGAGGAAGAAAA          TGCGGCAGGC GCCAA GCC-ACCGCG          TTCAATACGCGCCGC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 2205145 .. 2205202 - -13.4  -3.48276   CGGCCCTGGAGATAA CAGGGC-CGCCGCGCGGGC-GGC-CCG ACCGGCG CGGCGCCTGCATGCGCCGCGCGCCCTG CCCTACTTGCGGTCT  75 28
CXD84_RS10800 2204045 .. 2204057 - -10.5  -3.38291   GGGAGAATGTCAGAA                GGCCG TCT CGGCC                AGCCACTGGCGCCAC  65 7
CXD84_RS10790 2201221 .. 2201231 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 194
CXD84_RS10785 NONE
CXD84_RS10780 NONE
CXD84_RS10775 NONE
CXD84_RS10770 NONE
CXD84_RS10765 2195993 .. 2196039 - -14.3  -3.09581   CAAACGCGGAAGACA GCGGT-TTCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGATTACTGA CCATTAACGCAGGTT  73 29
        ftsB 2195565 .. 2195580 - -10.4  -5.86332   CCAAGGCAAAAAAAA              CTCCCC TGGC GGGGAG               TGTTGGCGCGTCCGG 100 50
CXD84_RS10750 2193012 .. 2193032 -  -4.5  -3.04792   TGATCAGGCGCAAGA            GCGGCGTCA TTG CGGCGCCGG            GGAGCGACTGAGCCA  45 11
CXD84_RS10745 NONE
CXD84_RS10740 2191767 .. 2191794 -  -6.2  -3.39784   CCAGGCCGAACAACA        CGCGCAGCGCCTG GCC CAGG-GCTGGCCG        GGCGGAGCCGGGCCG  55 294
CXD84_RS10660 NONE
        sdhC NONE
        sdhD NONE
CXD84_RS10645 NONE
CXD84_RS10640 2170696 .. 2170706 -  -6.8  -3.01906   CCAATAAACACTAGA                 CCGT ACG ACGG                 ACCATCAGTTCCTTG  51 10
CXD84_RS10635 NONE
CXD84_RS10630 2169032 .. 2169045 -  -9.5   -5.4505   GCCGGCAAGAAAAAA               CCGCC CGAA GGCGG                TTCTTTCAGTGGACG 100 54
CXD84_RS10600 NONE
CXD84_RS10595 NONE
CXD84_RS10590 NONE
CXD84_RS10585 NONE
        potA NONE
CXD84_RS10575 NONE
CXD84_RS10570 NONE
CXD84_RS10565 NONE
CXD84_RS10560 2154638 .. 2154656 -  -5.2  -4.36914   TGCTGGCCGAGAAAA             TCACCGAC GCG GCCGGCAA             CATGGCGCCGACGGT  69 331
        rmuC 2152703 .. 2152742 -  -5.5  -3.90744   TTGGCGGCGAAAGAA  TTGGGCGGACCGCCCGCC CCGCC GG-GGGCTCTCCGCCCCC  GTGCCTGCTCCTCAG  63 37
CXD84_RS10545 2151026 .. 2151040 -    -7  -2.96984   GAAATTTAGCAGATA               CCGGGC CAG GCGCGG               GCCAGAATCGGGGCC  51 1
        rpiA 2150173 .. 2150201 -  -5.2  -4.07885   TAGTGCCCCTGAAAA       CGCGGTTGCGCAG AGGG CTGCCCGACC-CG        CAAGGTTATGACCCG  64 106
        phoU 2149152 .. 2149207 -  -8.1  -3.05596   CAGGCGCGGATTGAA TCGGCCTA-TGGCGAGGCGCCCG-CGC TGCT GCGGCTGGCGCCGGGCGAGCAGGCCGC CTGGCCATATGAACC  52 166
        hrpA 2141585 .. 2141625 - -17.6  -3.57263   ACTGGCACCCGCAAA CTCTCGGGGTGCCTGTCCC CGCA GGGACAGGCA-CCCGTGGG  ACAGCCCCCTACCGC  90 34
CXD84_RS10505 NONE
CXD84_RS10500 NONE
CXD84_RS10495 NONE
CXD84_RS10490 NONE
CXD84_RS10485 2132913 .. 2132944 - -13.6  -3.04144   TGTTCATCTGGAACA      GTCCCGCCGCGCCG GCCC CGGCACGGCGCGAA       TACGACGCGTCCTAT  69 250
CXD84_RS10475 2130480 .. 2130497 -    -4  -3.76641   AGCGCAATACGCAAA             CGTCGC TTATCC GCGGCG              GCGCCTGTCTTCATA  57 14
CXD84_RS10470 2128916 .. 2128944 -  -2.3  -3.27743   CATCATCAAGGAATA       CGC-CGGCCTGT TCGTCT ACTGGCTGCGCG        GCTGGGTGTAACGGC  44 438
        msbA 2125187 .. 2125203 -  -6.5  -3.53012   TGGCCGCCGCCGAAA              CCATGGC GCC GCAATGG              GCGCAACAGGTGTTG  55 148
CXD84_RS10440 NONE
CXD84_RS10435 2121920 .. 2121933 -  -3.7  -4.74103   GGCCGAACTGAAAAA               GGCGC TCTC GCGCG                ACCGCACGCGCATGA  77 418
CXD84_RS10415 NONE
CXD84_RS10410 NONE
CXD84_RS10405 2117146 .. 2117184 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD84_RS10400 2113911 .. 2113921 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 2113702 .. 2113736 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD84_RS10390 2110548 .. 2110601 -  -6.6  -3.76224   TGCCCATCTACGAAA CCGCCGCCCTGCTGCGCAGCGC-CGGC ATC GCCGTACCCTGAGC-G-ACGCCGGCGG CGCGCGGTCACCAGC  62 33
CXD84_RS10350 2103666 .. 2103698 -  -4.6   -4.1899   CCAGTGTATGCAAAA      CGCGGCGGCCGTCA CAATC TGCCGCCTGCCGCT      CAGCGTCGCCGCGAC  66 25
CXD84_RS10345 2102178 .. 2102200 -    -9  -3.03441   CATCACCGCCGAACA           GGTGCGCGAC ATG GTCGCGCGCT           TTGCCCGCACCCTGG  55 107
CXD84_RS10335 2099379 .. 2099437 - -15.8   -3.6106   TGGAATATGTCGAAA GCGGCCGGCGCGAAGGCGCGCGGCTGC GCATGG GCGG-CGAGCGCGTGCGCGCCGACAGC GGCGGCTACTACATA  85 396
CXD84_RS10300 2091890 .. 2091919 - -18.5  -3.09492   TCGCCAACGGCAAGA       CGCGCGCCCAGGC CGAA GCCCGCGCGCGCG        AACTGCTGACCCTGG  85 432
CXD84_RS10275 2085155 .. 2085203 -    -8  -3.67296   CATTATCGATCCAAA CGGCGCGCGCGGCCAAGCGCGGGC CCA GCCGGCG-TCAGGCGC-CGCTCCA GGCCTCGGCGTTCAG  63 11
CXD84_RS10270 2083955 .. 2083993 -  -8.7  -3.03159   CCAAGTCCGCCAAGA  GCGCGGGCGGCGGCGCGGC CGA GGCG-GCGGCCGGC-GCGC  ACTGAGCGCCAGGCC  55 49
CXD84_RS10240 NONE
CXD84_RS10235 2076134 .. 2076153 - -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 54
CXD84_RS10220 2072850 .. 2072864 -    -7  -3.01924   GACGCTGGCCGAACA               GGGCGG CGC CGGCCC               GCACCTGATTACCGC  52 478
CXD84_RS10205 NONE
CXD84_RS10200 NONE
CXD84_RS10195 NONE
CXD84_RS10190 2066899 .. 2066930 -   -10  -4.07568   CTGCTTCCGGGAAAA      TGGGCGGGCCGCCGC CGT GCGG-AGCCCGCCGC      CGATGCGGGATTACT  78 36
CXD84_RS10180 2065245 .. 2065289 - -15.6  -3.17075   CGCCGGGCAAGGCAA GGCGGCC-GAGCTGCTGGCGC AGGC GCGCCAGCTGGCCTGGACGCC GCTGGTCGACGCCGA  77 197
CXD84_RS10165 2062084 .. 2062105 - -15.1  -3.01712   CGCGCTGGTCGAACA           GGCCGCGGC GGCG GCCACGGCC            ATGGAAGAACAGGCC  74 197
        greA 2059276 .. 2059296 -  -9.6  -3.07104   CGACAACGATACAGA            CGCCCGGC GCACG GCCCGGCG            TTCAGGAATTCGGAT  57 238
CXD84_RS10145 2057243 .. 2057280 -  -7.5  -3.16742   CTGAACGCTCACGAA   CGCGACCTGCGCAGCCGC CTG GAGGC-GCTCAGCGCGCG   CGGAGACGGCGCGGT  53 203
CXD84_RS10100 NONE
CXD84_RS10095 NONE
CXD84_RS10090 2049577 .. 2049590 -  -3.1  -3.17444   GGAGAAACAGACATA               TCGAA CCTC CTCGA                ATTGAAATCTTGACG  44 58
CXD84_RS10085 NONE
CXD84_RS10080 NONE
CXD84_RS10075 NONE
CXD84_RS10070 NONE
CXD84_RS10065 NONE
CXD84_RS10060 NONE
CXD84_RS10055 NONE
CXD84_RS10050 NONE
CXD84_RS10045 NONE
CXD84_RS10040 NONE
CXD84_RS10035 NONE
CXD84_RS10030 NONE
CXD84_RS10025 NONE
CXD84_RS10020 NONE
CXD84_RS10015 NONE
CXD84_RS10010 NONE
CXD84_RS10005 NONE
CXD84_RS10000 2035407 .. 2035429 - -14.2  -2.70932   GCGCTGCGCGAACGA           GGCTACGACA GCG TGCCGTAGCC           CCCCTGCCCGGGCCA  69 44
CXD84_RS09985 2033212 .. 2033226 -  -5.6  -3.59262   GCCGAGATCGCGAAA               CGGCCT TGC AGGCAG               GCGATGCAGCAGGTC  54 514
CXD84_RS09965 2026268 .. 2026284 -  -5.1  -2.78463   ACCTTGCGCAGCACA              TTGTGCG CGA CGCAGAA              CCTGCCTGCCGGCGC  43 398
CXD84_RS09950 2024343 .. 2024393 -  -5.5   -3.7108   AGCTGGACACCGAAA TCTACG-ATCG-TGAGCTGGCCG GCTGGAT CGGGCAGCGCATCGACGCGCAGA TCCGCCACGCGCGGC  58 123
CXD84_RS09940 2022759 .. 2022781 -  -4.1   -5.4505   CCGCCCAAGAAAAAA          GCACCC-GGC TTGC GCCTAAGTGC           CTGTTTTCAAACGAA  90 47
CXD84_RS09930 2019591 .. 2019631 -   -11  -3.53012   GGGTCCCGGGCCAAA  GCGCGCAGATCCCGGCCG TTACC CGGCAAAAGCCTGCGCGC  AGGCCGCGCGCCCGT  70 65
CXD84_RS09925 2018940 .. 2018974 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS09895 NONE
        ectA 2010522 .. 2010532 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS09885 2009051 .. 2009079 -  -2.9  -3.59738   CACGATACGCTCAAA        GCCCGCCTGTCCG ACT CGGTCAAGGACGC        CATGCGCGCCAAGGC  50 464
CXD84_RS09875 NONE
CXD84_RS09870 2007145 .. 2007182 - -11.4  -2.67021   GCGCCAAATAGCAAT  CCGGACAGCGGCCATAACC TAA GGTT--GGCCGCCG-CCGG  CGCGGCCGGACCTAC  61 37
CXD84_RS09865 2005553 .. 2005563 -  -8.2  -3.06796   CCCGAGCTGATCGAA                 CGGC AGC GCCG                 CGAACTGCTGGATGC  55 248
        mltG NONE
CXD84_RS09840 1999133 .. 1999152 -  -2.8  -3.16564   CTGCCAGGGCAGGAA            GCGAC-CGA GGC TCATGCCGC            TTGCGCCACCAGCTC  44 17
        holB 1998077 .. 1998090 -  -9.5  -4.03078   GGATCACAGGAGAAA               CGGGC CGTG GCCCG                ATCGTCACTGGCAGG  75 30
CXD84_RS09830 1997156 .. 1997188 - -13.4  -3.14132   GGGGCTGGCCAGCAA     GGCGCCGGCGAGCAGG CCG CCGGC-CGC-GGCGCC     GCGCCAGCGCAGAAA  72 112
CXD84_RS09825 NONE
CXD84_RS09820 1995452 .. 1995471 -   -15  -5.52384   CCCCGAGCAAAAAAA            TGCCGCCC CGGT GGGCGGCA             CGTGATCAGGTGGAG 100 94
CXD84_RS09815 1994573 .. 1994590 -  -5.6  -4.67982   TTGGAGTGAAGAAAA             CCGTAT GGATGG ATACGG              CCACAGGGATACATC  77 39
CXD84_RS09810 1993607 .. 1993622 -  -2.5  -3.90744   CGTGCCGCGAAAGAA              CAGCA GGTATA CGCTG               CACAGGTTGTAGATG  56 189
CXD84_RS09800 1992220 .. 1992276 -  -7.3  -3.65902   GGCATCGCAGGCAAA GCCCAGCACCGCGGCGTCGCCGGCGCCGG CGT CCTGCCCCAGCG-CG--ACGATG-TGGGC CAGGCGGCGCGTATC  61 100
CXD84_RS09790 1989853 .. 1989881 - -19.6  -3.04398   GCCTGCGCTGAAAAC       GGC-GCCGGCCCC TTGC GGGGCCGGCTGCC        TGGTACGCCGATGCG 100 68
CXD84_RS09710 NONE
CXD84_RS09705 1974224 .. 1974240 -  -2.9  -3.71645   AACGTCATATTGAAA              TGGACCG ATG CCATCCA              AGCCATAGGATACAA  53 98
CXD84_RS09700 1973132 .. 1973156 -  -6.3  -5.24129   GCGCTGGAGAAAAAA          GCGCAAGGCCA GGC TGGCCCCTCAC          CCGAAATCGACGGCC  93 173
CXD84_RS09675 1957125 .. 1957135 -  -3.2  -4.45261   GAAAGAAATGGAAAA                 CAAG AAT CTCG                 TGACAAGCCGACCAT  69 85
CXD84_RS09670 NONE
CXD84_RS09665 1953498 .. 1953529 -    -3   -3.9941   CCCCGCAGAAGGAAA     TTACGCGCGCGGGC ACGGCG GCCCG-GCG-GTCA      GCGAATATCTGGCTC  58 23
CXD84_RS09660 NONE
CXD84_RS09655 1950633 .. 1950648 -  -4.6  -2.78384   GGCTGCCGCAGCACA              TGACGC TGTA GCGTCG               CGGCCGCGTTCTCGC  43 46
CXD84_RS09610 1942391 .. 1942419 - -14.6   -3.6106   CGTAACAGGGGGAAA       GGC-CGCGCCCCGC CCA GCGGG-CGCGCGCC       GATGCATGATGGATT  81 40
CXD84_RS09605 1938637 .. 1938694 - -16.2  -2.71712   CGCCTTGTTCGAAAT GCGCGATGGCGGGCTGACCCTGCAGGT GCATG ACCGGCGCGACCAGCCCGCCTT-GCGC GTGACGGTGTGCCCG  77 63
CXD84_RS09590 1935476 .. 1935522 -  -8.6  -4.18018   CCGCCTGATCGAAAA CACGCGCGCGCGCGGCTACTC GGTGGT GGGCAACCACGCG-GTGCGCG GCGCGCTGGGCGTGG  75 197
CXD84_RS09580 1933723 .. 1933740 - -12.7  -4.19735   GGCTCCAAAAGCAAA             GACGCCC TCGC GGGCGTC              TTCTTCACGCTCGAG  91 53
CXD84_RS09570 1931811 .. 1931824 -  -9.5  -2.81966   GGAAATGCCATGACA               CGCCG GTGA CGGCG                CGCGGCCGCGCATCC  56 85
CXD84_RS09565 NONE
CXD84_RS09560 1929254 .. 1929279 - -19.1  -4.56597   CCGCGCCGGGAAAAA         GAGCCTGTCCC CGTC GGGACAGGCTC          TTTTCATTTGGCGTA 100 29
CXD84_RS09540 NONE
CXD84_RS09535 NONE
CXD84_RS09530 1923574 .. 1923584 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS09525 NONE
        tilS 1921395 .. 1921417 -    -9  -3.28924   TACTCTGGCTGACAA           GCCCGCATAG GGT CTGGGCGGGC           AAAGCTGAGTATTTT  61 83
CXD84_RS09515 NONE
CXD84_RS09510 1919900 .. 1919921 - -14.5  -5.45802   GCCGCAAAAGAAAAA           GGCCCTTGA TTGC TCAAGGGCC            TTTTTGATCTTTGGC 100 37
CXD84_RS09500 NONE
CXD84_RS09495 NONE
CXD84_RS09490 NONE
CXD84_RS09485 NONE
CXD84_RS09480 NONE
CXD84_RS09475 NONE
CXD84_RS09470 NONE
CXD84_RS09465 NONE
CXD84_RS09460 NONE
CXD84_RS09455 1910169 .. 1910179 -  -2.4  -2.66316   TGGTGCACGACATCA                 CCCC GTC GGTG                 TCCACGCTCAATGAA  38 477
CXD84_RS09445 1908012 .. 1908054 -  -8.2  -3.25073   GGCGCAACAGGAACA CCGGCCGGCCGGGCGC-CG CCTGTT CGAGCGCCTGGCGCGCGGG ATAGCCGCCGCTGTG  58 408
CXD84_RS09435 1905955 .. 1905977 - -10.6  -2.70932   CGCCGCGGCGAACCA           CCATGAGGGT CGC ACGCTCATGG           CGCACCGAACAGCGA  60 20
CXD84_RS09430 NONE
CXD84_RS09425 1904048 .. 1904064 -  -5.1  -4.12198   TACAAGGTTGTAAAA              CAGGC GCCGCCG GCCTG              CCCGCCTGTAAGGGA  64 45
CXD84_RS09420 1903841 .. 1903868 - -18.6  -5.04385   GACAGGCGCAAAAAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTCGGTACTGCTTGC 100 83
CXD84_RS09375 NONE
CXD84_RS09370 1895188 .. 1895208 -  -4.5  -3.19157   GACGAAGCGGACGAA            CTGGCCGCC TGG AGCGGGCCG            CCCATGCAGCGGCAA  47 99
CXD84_RS09345 1888859 .. 1888872 -  -9.5  -3.53091   AGCCGGCTTTTCAAA               CCGCC CGGC GGCGG                GTGCGGCGATACAGG  64 7
CXD84_RS09340 1888692 .. 1888716 - -17.2  -4.98531   CGCCCAAAGCAAAAA          GCCGCCATGC ACAAG GCATGGCGGC          TTTTCATATTGGCGC 100 35
CXD84_RS09335 1887987 .. 1888006 -    -5  -4.20696   CGACCAAGCCGAAAA            TTAGAGCG TTGA CGCTTTAA             TTCGCCTAGTATTTT  66 43
CXD84_RS09325 1885385 .. 1885423 -  -8.8  -2.96873   ACCTCTAGGAAATCA  CGCATCGTCGCG-ACGA TGCATC CCGCCCGCGACGGCGCG   CCCGCGACACGGACG  55 54
CXD84_RS09320 NONE
CXD84_RS09315 NONE
CXD84_RS09310 1881735 .. 1881762 -   -12  -3.01924   GAGCCGCCGGCAACA        GGTGCCTGTCCC AACC GGGACAGATACC         GTCCTGGCGGTCAAG  65 134
CXD84_RS09280 NONE
CXD84_RS09275 1874006 .. 1874034 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGCGCGGTGG  56 86
CXD84_RS09270 1872618 .. 1872641 -    -6  -3.15544   GCGCACCGCGATGAA          CACGT-CCGGC GTG GCCGGCACATA          ATCGGACGCCGCACC  51 271
CXD84_RS09260 1868998 .. 1869010 -  -5.5  -3.36749   GACCGGCAAGACCAA                GACGC GCG GCATC                GAACTGGAATTCCGC  49 423
CXD84_RS09245 1865163 .. 1865173 -  -8.2  -3.54424   GTCCAGCTCGCGAAA                 GCCG CCC CGGC                 TCAGCAGCAGGCCCA  62 421
CXD84_RS09235 NONE
CXD84_RS09230 1861547 .. 1861572 -  -3.3  -3.61517   ATTTCGCGCGAATAA        TGGCCGTCGCC GGTTCA GGCG-C-GCCA         GCGGCGGTAGCCGCA  49 82
CXD84_RS09225 NONE
CXD84_RS09220 1858399 .. 1858413 -  -3.4  -3.96051   ACAGAACAGATGAAA               CATGGC GTA GCCTCG               TTGATGATGCCGCGC  58 131
CXD84_RS09215 1857339 .. 1857367 - -15.2  -3.53012   CGCCTGCTCCGGAAA        GCGCGCCCGGCC GCCGG GGCCGGGCAAGC        GGGATGGTTGCGCCC  81 41
CXD84_RS09210 NONE
CXD84_RS09205 1855219 .. 1855267 - -18.2  -2.90075   GCCCGGGGAACGACA CCTGCGGCAAGGGTGCCTGTCCC CGCA GGGACAGGCACCCTAGG-GCACG ACCTCGGCCAGCACC  86 16
CXD84_RS09175 1846511 .. 1846539 - -10.1  -3.06915   AGGTAGGCGACCGAA        GCCACCACGCCGC CAT GCGGCGCGCCCGC        GGCCTGAACGTTCTG  60 125
CXD84_RS09170 NONE
CXD84_RS09165 1845023 .. 1845042 -  -4.2    -3.889   CGCAAGGATAGCAAA            GGC-CGGCG AGC CGCCATACC            CCGGGATGCCCGTAT  57 62
CXD84_RS09160 NONE
CXD84_RS09155 NONE
CXD84_RS09150 NONE
CXD84_RS09145 1838577 .. 1838631 - -15.7  -2.71364   GGACTTCGTCAACGA TTGACGGTTGGCACGGTGCCTGTCCC CACG GGGACAGGCACCGCATCC-CCGCCTA CTCGTTCTCCGCCCC  75 23
CXD84_RS09115 NONE
CXD84_RS09110 NONE
CXD84_RS09105 NONE
CXD84_RS09100 1830874 .. 1830890 -    -3  -2.78679   CGCCGGGACGGAAAG              GAAATG GCGCG CATCTC              AGGCCCCCTCGCCCG  40 24
CXD84_RS09095 NONE
        cpaB 1829479 .. 1829493 -  -3.5  -3.01791   AGCTGTTCGTCAATA               GCGCA CTGCC TGCAC               GTCGCCGCCGCGCAC  44 5
CXD84_RS09085 NONE
CXD84_RS09080 1826666 .. 1826689 - -12.4  -3.16564   TTCGGACGCGATGAA          TTCGCCGCCG CCCG CGGCGCCGAA           TTCCATGGATGGCGG  69 58
CXD84_RS09070 NONE
CXD84_RS09065 NONE
CXD84_RS09060 NONE
CXD84_RS09050 NONE
CXD84_RS09045 1818506 .. 1818542 -  -4.4  -3.04398   GCGGTTTCGTAAAAC   CCGTGGCCCAACCCG GCCGGTTA CGGATCGG-CCACGC    CATCGGCCGTTTCGG  45 9
CXD84_RS09040 1817687 .. 1817702 -  -3.2  -3.83318   CCGGCAATAATACAA              GCGTAG CCGC CTATGC               CCCGCCCCGCCATAC  56 74
CXD84_RS09035 NONE
CXD84_RS09030 1816316 .. 1816342 - -11.5  -3.65351   CGAGCTGGACGGAAA        TGCCGGC-CCGC GGCC GCGGCGCCGGCG         AACCGGCGCCGGACC  75 105
CXD84_RS09025 1815718 .. 1815730 -  -2.6  -3.29471   CGTTCATGATACGAA                GGCC GAAGG GACC                GGGGGCTCGCCCAGC  44 1
CXD84_RS09020 1815210 .. 1815229 - -16.4  -3.75629   CAGGCGCAACCGAAA            CGGGCCGC ATGC GCGGCCCG             TTTTTTTTGCCCCGG  88 95
CXD84_RS09000 1810905 .. 1810917 -  -7.7  -2.71144   CATCGTGGGCAACGA                GACGT TCG ACGTC                ACGGGCCTGGAGGGC  49 311
CXD84_RS08985 1804935 .. 1804960 -  -4.7  -3.06696   TTGCGTTTCAAGACA         TGCAGGACGTGA ACC CCA-GTCCTGCG         CCAGGCGAGCATTGC  45 133
CXD84_RS08980 1803891 .. 1803925 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 271
CXD84_RS08950 NONE
CXD84_RS08945 1797740 .. 1797759 -  -9.2  -2.72344   GCCGATTTCGAAGCA            GGCGTGGC GCAG GCCAGGCC             GCTGTTCATGCGCGC  52 243
CXD84_RS08935 1797245 .. 1797263 -  -4.4  -3.66018   GGAGGATGGGAAGAA             TCAGTCGG GCA CCGGCTGG             CTGGCCTGTTCACCC  55 7
CXD84_RS08930 NONE
CXD84_RS08925 1795140 .. 1795186 -  -7.2  -3.55444   CTCCGATTCCGTAAA GCGACGGAACACGCTCGCCGAT TTCCG ACCGGCAGGCG-GA-CCGCCGC CTGGCTCCCCTTTGT  58 339
CXD84_RS08920 1794394 .. 1794428 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 262
CXD84_RS08900 1790531 .. 1790564 - -15.9  -2.70932   GCGCCGCTTCAAGGA     CGACGAGGCGGACGC GCCG GCGCCGGCCACGTCG      GCCGCGGCCGCGCGC  75 93
CXD84_RS08885 1787897 .. 1787953 -  -7.2  -4.64334   AACGCCGCAACAAAA CCCTGGTTGGCG-GCGGCTGCCCCGCC TTGCGC GG-GGGGCCGCCGCGCGTGGAC-AGGG CCGCACGCGCCTTGC  79 173
CXD84_RS08880 NONE
CXD84_RS08875 NONE
CXD84_RS08870 1785312 .. 1785350 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD84_RS08865 1782077 .. 1782087 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 1781868 .. 1781902 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD84_RS08840 1777950 .. 1777972 -  -4.7  -2.70932   GCGCCGCGCCAACGA           GGAGCTGCG CCACC CGCTGCTGC           AGCATCGGCCGTTCA  43 296
CXD84_RS08795 1769485 .. 1769495 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 180
CXD84_RS08790 1768297 .. 1768336 -  -8.4  -3.60098   AGGCGCTAGCGTAAA  CCCATG-GCCGCGCACGCG CAA CGCGCGGGCGACTCCTGTG  TTTGCCACGGCGCTT  62 170
CXD84_RS08785 1766026 .. 1766039 -  -5.9  -3.82824   CACGATCGACAAGAA               CGGCA TCGA CGCCG                TCCTGGCCGACCTGC  63 408
CXD84_RS08755 1760223 .. 1760235 -  -4.7  -2.71712   CGCGGCCCGGGAAAG                GGCCG CTC CGGCG                TACGGGGCCGGCGAC  43 145
CXD84_RS08750 NONE
CXD84_RS08745 1757994 .. 1758013 - -11.4  -4.11692   GAGCGATTGGGAAAA            CGGCCACC CACT GGTGACCG             TCTTCCATCATATCG  82 78
CXD84_RS08740 1757569 .. 1757584 -    -6  -2.83112   ATGCAATCGATCATA              CCGCCG CTCG CCGCGG               CATGCCTCAGCGGCC  48 32
CXD84_RS08735 1756242 .. 1756269 -  -2.5  -3.08679   GGGGTGTAGCGAATA        GGCATCGCGGC ATTGTA GCCACTGCGCC         CCCCCCTCGCCGCAG  42 87
CXD84_RS08730 1755400 .. 1755412 -  -3.3  -3.78793   CATAATTATGAATAA                GGCGA TGG TAGCC                TGCTTTGCGGCGGCC  56 89
CXD84_RS08725 1754527 .. 1754554 -    -9  -3.01712   TGTCTCGCTCGAACA        GCCGGCCCAGCC GGGC GATCAGGCCGGC         GCTTTCGCCGGCGGC  57 69
CXD84_RS08720 NONE
CXD84_RS08715 1752054 .. 1752083 -  -8.5  -2.62983   CGGACGTGTACAGGA       TGGCG-GCCAGGTC GTC GGCCTTGCGCGCCA       CCGTCCTGAAGCGCT  52 485
CXD84_RS08705 1749776 .. 1749799 - -13.8    -4.015   CCAGCGATGAAAGAA          GAGCCGCGCC GGCC GGCGCCGCTC           CCCTTTCGTCCCTCA  84 53
CXD84_RS08700 1749132 .. 1749151 -  -5.6  -3.32343   GGGATATCCCTAGAA            CGGCCGGCC GCG GGACGGC-G            CAACCCCTACTTCAC  51 32
CXD84_RS08695 1747986 .. 1748017 - -20.8  -2.71712   GTGTTCGGTGGAAAT      GCCGGCCGGGCGCC GCGC GGCGCCCGGCCGAA       TACGCGATTACTTGA 100 33
CXD84_RS08685 1745955 .. 1745998 - -10.9  -3.14344   CATCGCCTTGATCAA GGCGCAGGCGGTGCTGCTGGG CCTG CCCGGCC-C-CGGCCTGCGCC TGTCCGCGCGCAACC  64 257
CXD84_RS08675 NONE
CXD84_RS08670 NONE
CXD84_RS08665 1742774 .. 1742790 -  -2.1  -4.62069   CGCTGAGGCGAAAAA              CGCATGG ATT CCTCACG              GAGGTAAAAGCGCGC  70 266
CXD84_RS08660 1741429 .. 1741460 -   -15  -4.26076   CGATGCTCACGAAAA      GGGAACGCGGCGCC GTCG GGCGCCGCGCGCCG       CTTAGGACTGCTGGC  95 27
CXD84_RS08655 1737932 .. 1737963 -  -6.5  -3.61398   CGCGTCGCGGAAGAA      CTCGCACCAGCCGA TCTCG TCGGCCGGCGTG-G      CGCCCTGCGGCGCCA  56 227
CXD84_RS08645 1735908 .. 1735926 - -11.6  -2.56271   TCGTGATGATAATAC             GCCGGGCG CCC CGCCCTGC             TTCAGGCGTGGCCGC  61 27
CXD84_RS08640 NONE
CXD84_RS08635 NONE
        uvrC NONE
        pgsA 1731786 .. 1731796 -  -8.2  -3.85698   CGCGGTCTCCAGAAA                 GCGG CGG CCGC                 GAACCAGCCCGCCAC  68 111
        aceA 1727914 .. 1727935 - -11.5  -6.06723   GGCGGCAAAAAAAAA           GGGGGCGTC CGAG GACGCCCCA            AATCCACCCTGCAAC 100 85
CXD84_RS08605 1726515 .. 1726531 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD84_RS08580 NONE
CXD84_RS08575 NONE
CXD84_RS08570 NONE
CXD84_RS08565 1719406 .. 1719419 -  -2.4  -4.25658   AGGCGATGAAAATAA               TCGT TGTCAT ACGA                GGCGTTCCCGTCGTG  62 43
CXD84_RS08560 NONE
CXD84_RS08555 1717845 .. 1717860 -  -6.1  -3.20382   TTCCAGATCTACGAA              GCGCT GGCCGA AGCGC               AGGAGTCGATCGACG  50 100
CXD84_RS08525 NONE
CXD84_RS08520 1708304 .. 1708314 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS08510 NONE
CXD84_RS08505 1705694 .. 1705712 -  -6.8  -3.28712   TCCTGCGGTTTATAA             GATGTATC TAT AATACATC             TTATGGCTTAGGCAT  54 442
CXD84_RS08495 NONE
CXD84_RS08490 NONE
CXD84_RS08485 1703553 .. 1703569 -  -2.1  -3.08046   TTCTCACTGCAAAAG              TTCGGCC AAC GGCGGAT              TTTCGCAGATTTGGG  42 60
         xth NONE
CXD84_RS08475 1701137 .. 1701148 -  -2.2  -2.90571   AAGTCCGCAACTATA                CACGG ATT CCG-G                CCGTTTTGGTAGCGG  40 82
CXD84_RS08470 1700998 .. 1701025 - -12.8  -5.63517   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT 100 42
CXD84_RS08430 1694710 .. 1694737 - -18.4  -2.50443   GGAGAGGGCAGGAAG        CGGGCGCGCGCA GGCG TGCGCGCGCCTG         GCCGGGAGGCGTCTG  87 406
CXD84_RS08405 1690479 .. 1690497 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 249
CXD84_RS08375 1684990 .. 1685000 -  -2.4  -2.71461   AGAATAGGAAACCGA                 GGCC CGT GGCG                 GCAATGCCGATTGCT  38 101
CXD84_RS08370 NONE
CXD84_RS08365 NONE
CXD84_RS08360 NONE
CXD84_RS08355 1679730 .. 1679776 - -17.2  -3.56821   AGGAGATCCTGGAAA GCCGGCGCCAGGCCGGCGAAG GGGACG CCGCGCCGGCC-GGCGGCGAC GGGCCTGCGCCGCTG  93 418
CXD84_RS08340 NONE
CXD84_RS08335 NONE
CXD84_RS08330 1676152 .. 1676186 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 213
CXD84_RS08310 1673742 .. 1673752 -  -2.4  -2.71712   TCTCGCGGGCGAAAG                 CGGG CCC CCAG                 TATCCCGGCAAGCGG  38 75
CXD84_RS08305 NONE
CXD84_RS08300 1670694 .. 1670725 -  -6.4  -3.23216   CCGCACGAGCACGAA      CGCACCGGCCACCAG GGG CCCGAGGC-GGCGCG      CGTCAATCGCGTCTG  50 480
CXD84_RS08290 1669470 .. 1669527 - -21.1  -2.83403   GCGCCGCCAGGAAAG CCGCCATCGCCCGGGCCGCCGCCCGGC ATGG GCCGGGCGGCGGTTCGAAGGACGAAGG ATGTTGCTATTAAAC 100 102
CXD84_RS08285 1668669 .. 1668695 -   -10   -3.5393   ATGATCCGGCGCAAA         TGGCCGCTCAAC TGA GCAGGGCGGCCA         CCAGATCGCGGTTGG  67 6
CXD84_RS08280 1666427 .. 1666447 -  -5.3  -3.57144   GCCTGGACGCGCAAA            GTATCCGCT TCG AGCGGCTGC            TGCCCGGGCCCATCG  54 514
CXD84_RS08265 1664985 .. 1665036 - -11.6  -3.14931   GGGATGGCGCAGCAA CTGGCCGGCGCCGAG-CGCATCGTCG ACGC CG-CGGTGCGGCGCG-CGCCGGCC-G ACTGAGCCGGGCGCG  66 41
CXD84_RS08255 1664113 .. 1664144 - -24.6  -2.82759   AAGATACCTATGACA      CAGGAGCCTGTCCC GACG GGGACAGGCTCCTG       CCGAATCCTTCCGTA 100 121
CXD84_RS08245 1662298 .. 1662316 - -10.2  -3.01712   TCCTGCCGCTGAACA             GCCGCGAG CGC CTGGCGGC             GATGCGCTACGACCT  59 358
CXD84_RS08235 1660313 .. 1660328 - -10.4  -2.78384   GGGTGGCCGACTATA              TCGCGC GGCT GCGCGA               CGACCCCGAGCTGGC  56 498
CXD84_RS08220 1657740 .. 1657762 - -11.3  -2.70932   GGCGCTGTCGAATTA           CCAGCAGAC CAAGT GCCTGCTGG           TGAGCTACAGCGCCA  59 148
CXD84_RS08210 1653954 .. 1653988 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CXD84_RS08170 1647034 .. 1647068 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS08160 1645143 .. 1645170 -  -5.5  -3.66058   ACAGCAGATAGAGAA        TGCTCATGGCGC GGGTT GCGCCACG-GCG        GCGGCGGGCGCGGCG  57 1
        ccoS 1644600 .. 1644623 -  -7.4  -3.28924   CAGCTTGTCGCAGAA          CAGCCGCGCCT GAC AGGTGCG-CTG          CACCACGTAATACGA  56 408
        ccoO NONE
CXD84_RS08140 NONE
        ccoP NONE
        ccoG NONE
CXD84_RS08125 1639764 .. 1639813 -  -2.6  -3.11812   ATCCACATCAGCGAA CGCCAGCGCATGGTCG-GCTCCGC TTCA GCGACGCGCGTCGGCG-GCCGGCG CGGCGACGCGCTCGA  42 0
CXD84_RS08120 1639528 .. 1639545 -  -3.3   -3.6761   GCGTCGCAACAAACA             CGGCGCT TCAG AACGGCG              TCTCGTCCTGGCCGC  53 15
CXD84_RS08115 NONE
CXD84_RS08110 NONE
CXD84_RS08105 NONE
CXD84_RS08100 1635905 .. 1635932 -  -6.2  -3.01712   CGCCGGGCCCGAACA        GGGCGTCGCGCTG GCG CAGCT-GACGGCC        GCCACCATCCGGGCC  48 476
CXD84_RS08090 NONE
CXD84_RS08085 1633772 .. 1633796 -  -4.9  -3.77087   GAGTGAACATGGAAA          TCCGCCCCG TACGCAC CGAGGCCGA          TTACAAGTCGGCTCT  58 361
CXD84_RS08075 1632700 .. 1632717 -  -8.3  -3.67954   CAAATAGAGGCCAAA             GCGCTGC GCAA GCTGCGC              CACCCCAGCCGCGCC  67 483
CXD84_RS08060 1629702 .. 1629719 -  -8.3  -3.63968   GCCGAAATGGCGAAA             CTGGCCG AAAG CGGCCTG              GCGACCGACGAGGCG  63 129
CXD84_RS07965 1607890 .. 1607908 - -17.4  -3.15544   TGCCATGGGCAGGAA             CCCCCGGC CGC GCCGGGGG             GCCCTTGCGTTCAGA  84 36
CXD84_RS07950 1604911 .. 1604921 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS07940 NONE
CXD84_RS07935 NONE
CXD84_RS07930 1602125 .. 1602147 - -11.2  -3.57144   CGGGCGAGCGCGAAA           GCTAGGGCGC GCG GCGCGCCAGC           GCGGCCAGCGCGTCG  70 4
CXD84_RS07910 1599375 .. 1599394 - -16.4  -3.90112   CTGCCGGCAAGCAAA            CGGCCCGC GCAA GCGGGCCG             TTTGTCTTGGCGCGA  93 53
CXD84_RS07820 NONE
CXD84_RS07815 1578524 .. 1578542 - -17.4  -3.10522   AGGCGACGCAACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGCGTAC  84 135
CXD84_RS07750 1565626 .. 1565636 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 86
CXD84_RS07745 1564253 .. 1564268 -    -6  -2.50699   GCTCAAGGAAGATAT              GGTGGC GTTT GCCGCC               GAGCATTTCGACCTG  44 379
CXD84_RS07685 1553717 .. 1553745 - -19.7  -4.15508   AAGCAAGCCGCAAAA        GAAAAGCGGAGCC ATG GGCTCCGCTTCTC        GATGCCGGCCGTGCC 100 45
        lexA 1552922 .. 1552936 - -12.8  -4.74103   GCCCCAAGGCAAAAA               GCCCCC TCG GGGGGC               AGCAAGCCCGCGTAG 100 75
CXD84_RS07595 1538203 .. 1538227 - -22.9  -4.11692   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTCGGCTATC 100 91
CXD84_RS07570 1531350 .. 1531375 - -14.7  -5.14563   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 45
CXD84_RS07535 1526811 .. 1526847 -   -21  -4.59773   CCCCATCCGTAAAAA    GAACTGCCGTCATCCC TTGTG GGGATGGCGGCAGTTC    GACTGCGCACGCGAA 100 69
        dapD NONE
CXD84_RS07515 NONE
CXD84_RS07510 1522452 .. 1522462 -  -4.6  -2.64912   GGGTCAAGCCAGAAG                 CGCG TAT CACG                 TGTTCAATTGTTCGC  42 21
CXD84_RS07505 1520477 .. 1520487 -  -2.4  -3.58365   GAGTATAGGAGATAA                 TGCG TCT CGCT                 GGTTTTACGCTGCGC  48 74
CXD84_RS07500 1517087 .. 1517101 -  -7.1  -3.53012   CCCGGGCCCGGGAAA               GGCTG TATCT CAGCC               TGGCGCAAAGCCGCA  58 488
CXD84_RS07485 1513170 .. 1513204 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS07470 NONE
CXD84_RS07465 NONE
CXD84_RS07460 1505851 .. 1505866 -    -6  -4.08945   AGCATGGCGGGAAAA              GGGCGC GGCG GCGCCG               CCTGTCAAAGTGGTG  66 104
       coaBC 1504414 .. 1504466 -  -9.2  -3.53174   AGAGGCGGAGAAACA GCAACTG-GA-AGCCCGGCC-GCGC TTTCTG GCGCTGGCCTGGCTGTCGCTGTCGC ATTCGCTGATCGAGG  61 191
CXD84_RS07445 1502857 .. 1502891 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS07415 1497922 .. 1497938 -  -2.1  -3.61398   TTGCGCGGTGAAGAA              GACATCC GCC GGCTGGC              CGGCCATACCTTGCT  50 223
        cphA 1492411 .. 1492431 - -15.4  -3.61398   CCTGTCGTCGAAGAA            GCGCCGCC GTTCG GGCGGCGC            GGCAAGAGGGGCGAA  83 50
        cphA 1489736 .. 1489753 - -14.1  -5.28176   CGCAGGGAGAAAAAA             GGCCGGC TTGC GCCGGCC              CAAGTTACATTTGAG 100 84
CXD84_RS07390 NONE
CXD84_RS07385 NONE
CXD84_RS07380 1488688 .. 1488709 - -15.9  -5.86965   AGGCACCAAAAAAAA           GCCTTCGGG CGAA CCCGAAGGC            GGTACACGTACGGCG 100 73
CXD84_RS07360 1486206 .. 1486224 -  -5.9  -3.16564   CGCCGAGGCCATCAA             GGGCGAC GCTCA GTCGGCC             GCAGGCTGAGCCAGC  51 16
CXD84_RS07350 1483275 .. 1483301 -  -5.1   -2.8352   CGGTAACTGAACAAG        GCGGCTCCG-CGT CAG ACGGCGG-GCCGG        ATGGTGGCCAGCTCG  46 10
        rlmJ 1481986 .. 1482028 -  -8.8  -3.28924   CATCGCCGGCGAGAA CGCCGCGCGCTATCCGGACG TCG CGCCGGGCCTGCGCCGGGCG GCGCTGGGCGTGGTG  59 407
        cueR 1479147 .. 1479169 -  -8.3  -3.29144   CCAGGCGCGGCAGAA           GGCGCGCGA GGAGG CCGAGCGCC           TTGCCGAGGCGGCCG  58 72
        plsY 1471790 .. 1471818 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGCGCGGTGG  56 162
CXD84_RS07280 1470267 .. 1470294 -  -9.8  -2.52464   GGCGGCGGCAACGCA        GGCCGCCATC GTCGAGGT GCTGGCGGCC         AAGGCCATCCGCGCC  55 402
CXD84_RS07270 1468052 .. 1468082 - -18.3  -3.58343   TTGACGACCTCGAAA       GCAGGCAGGCCGC GCGAG GCGGCCTGCTTGC       GGGGCGAGGCGCGCG  90 49
CXD84_RS07260 1466227 .. 1466242 -  -4.6  -3.64703   GCGTGCGCAGCGAAA              CCTTCG ACGC CGACGG               CGCGCAACTGGAATT  54 146
CXD84_RS07220 1457800 .. 1457810 -  -8.2  -3.21747   GGATGGGAGGAGTAA                 CGCG CTG CGCG                 GGCGCGTCGCGACGC  58 106
CXD84_RS07215 NONE
CXD84_RS07210 1455215 .. 1455229 -  -2.7  -3.75169   GACGACTCCATGAAA               CGGGG ACCGG CCACG               CGGGGCAGGGATTCT  53 39
CXD84_RS07205 1454327 .. 1454361 - -14.9  -3.63515   GCCCATCGGCAAGAA     GGTGGGCCTGGCCAC CGAAC GCGGCATGGCCCACC     TCGTCATCGACGAGC  83 64
CXD84_RS07130 1440541 .. 1440562 -  -3.6  -3.53012   CCCTGGCCGCCGAAA           CCCGCGAC CAGGGC ATCGCGGC            CAACGCGGTGCTGCC  49 205
CXD84_RS07110 1436582 .. 1436602 - -12.5  -3.30441   TACCAGGCTGGAGAA            GGCGGCCTC GTA GAGGCCGGC            GCCCATCGCCACGCC  71 362
        arsH 1434348 .. 1434358 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 255
CXD84_RS07085 1432882 .. 1432916 - -17.1  -2.66316   CGTCCTACGACATGA    CGCCGCC-GGCCGCCA AGGA CGGCGGCCAGGAGGCG     CCGTGAGCGACGCCC  80 453
CXD84_RS07065 1429477 .. 1429494 -  -4.8  -3.16742   CTCAAGCCGGAGTAA             GGCCGCC GCTCA GGCG-CC             GGGAAACCGCATGGG  47 17
CXD84_RS07045 1425759 .. 1425770 -  -5.8  -2.62184   TGCCCGCTCAGACGA                TGCG CGTG CGCA                 AGGTGCCGATCTGCG  44 6
CXD84_RS07040 NONE
CXD84_RS07035 1423710 .. 1423720 -  -6.8  -2.94912   CCTTGAAGTTATAGA                 GCAG GTT CTGC                 CTGGATGCGCGGCGC  51 59
CXD84_RS07030 NONE
CXD84_RS07025 1421446 .. 1421457 -  -7.2  -3.14132   CCTGGTGCGCACCAA                CCCG CGCA CGGG                 CCGGCGCTCGCTCTA  53 253
CXD84_RS07015 1419869 .. 1419887 - -10.4  -3.68073   CAGTTCATGGAAGAA             TATACGTC ATT GACGTATA             TTTCAATCGCCAGCA  70 109
CXD84_RS07005 1419312 .. 1419337 - -13.3  -2.79831   GCAACCGCCAGCACA         CCGCCAGCG TGGTGCTG CGCTGGCGG          TTCTGAATCGCAGCT  67 45
CXD84_RS06995 NONE
CXD84_RS06990 NONE
CXD84_RS06980 1411140 .. 1411188 -  -7.3  -2.84192   GACATGAGCAGTACA CCCTTGCGGGCCGGGCGCGCGGCG GCGC CGCCGCGCG-CCGAAGCGC--GGC CGCTGGCCGGACTGT  50 439
CXD84_RS06925 1399530 .. 1399543 -  -9.5   -2.5092   GAATATTTTATGAAT               GCGCG CGGC CGCGC                GGCGCGGCCTGGAAG  54 61
CXD84_RS06920 NONE
CXD84_RS06915 1397487 .. 1397512 -  -9.7  -3.24232   CTCCCTTGAAAGACA         CGCTCCTGCCGA TTC TAGGCAGG-GCG         GCGGGCGGATCGGCC  61 120
CXD84_RS06910 1396635 .. 1396645 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS06905 1395604 .. 1395615 -  -5.8  -3.01712   GGCTCGCGCCGAAGA                TCGC GCCG GCGA                 CCGAGCCGACGCCGC  47 41
CXD84_RS06895 NONE
CXD84_RS06890 1393732 .. 1393742 -  -3.2  -4.09685   TCGTACGGGCCAAAA                 CACC TCC GATG                 ACGCGAGTGCCGCGA  59 252
CXD84_RS06885 1392803 .. 1392824 -  -8.7  -3.30771   CGAGAGCGTGCAGAA           CGCCATCGAC CAG GCCGA-GGCG           GTGGCCGACGATATG  58 328
CXD84_RS06875 1390513 .. 1390531 - -12.4  -3.57144   CGCTGCATTGGGAAA             GCGTCGAC GCG GCCGACGC             CGCGGCGGTGCTGGA  74 344
CXD84_RS06805 NONE
CXD84_RS06800 1371174 .. 1371209 -    -9  -4.70266   AACAGCAGGGAAAAA   GA-GGC-CCCGCGCCG TGCCCG CCGCGCGGGCGCCGTC    GTGCTGGACGGGCTT  86 94
CXD84_RS06795 1368853 .. 1368874 - -15.9  -4.77165   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 306
CXD84_RS06775 1365410 .. 1365428 - -10.2  -2.62184   CCTCGCTGGAGACCA             TCCGCCAC ATG GTGGCGGC             CGGGATCGGGGTGAC  55 278
CXD84_RS06740 1356412 .. 1356470 - -12.3  -4.06419   TTCGTGGACAAATAA GGCCGTGCGCCGCCA-GGAAAAGCCGCC TTCG GGCGGTTTTTCTTTGGCCGCGCGCCGGC GCCGTTCATGCGTCG  83 31
CXD84_RS06730 1354155 .. 1354182 - -15.6  -4.59773   TGCTACGGGGAAAAA        TGCAAAGCGGCC GGAT GGCCGCTTTGCC         GACAAACAAGGCAGT 100 107
CXD84_RS06725 NONE
CXD84_RS06720 1351626 .. 1351636 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS06715 1350303 .. 1350314 -  -2.2  -3.21099   CCGCCCGAGCACGAA                GAGCG CGC CGC-C                TACCTGGTCGAGGGG  43 333
CXD84_RS06700 1347495 .. 1347548 - -19.6  -3.01712   CCGGGCGGTCGAACA CCAGCAGGCGGCGGCC-CGGCAGGCCG AAC CGG-CTGCCGCGGCTGCCG-CGGCCGG GACGGCGCCGGCCCC  87 294
CXD84_RS06665 1338622 .. 1338650 - -11.6  -2.65298   GCCACGCAGGAGAAT        GCCGCCATGGCC GAGCA GACCGCGGCGGC        GGCGGCCTCGCTGGA  61 105
CXD84_RS06650 1334451 .. 1334486 - -20.4  -2.84602   GGCACTGCAGTAAAC    CCGCGTGCCTGTCCCC GCAC GGGGACTGGCACGCGC     TGAATCCGGGGTGCC 100 154
CXD84_RS06640 1332425 .. 1332440 -  -6.2  -3.07355   TTGAAACAACAACGA              CTGAAA AGGA TTTCAG               GGGCACCGGTCTATG  49 230
CXD84_RS06635 1332198 .. 1332242 -  -3.6  -3.02471   GCGCCAGCAGATACA GTGGCATGAG-GTCATCGTGCT AGT AGTA-GATGACGCGCACGCCGC CCGTGCCTTCCATGA  44 0
CXD84_RS06630 NONE
CXD84_RS06625 1331565 .. 1331577 -  -9.1  -3.28712   GTGCGTGTCCGACAA                GCCGT TGC ACGGC                GAGCTCAAATTGCCC  59 243
CXD84_RS06615 1328905 .. 1328926 -  -7.9  -3.61398   TGTGCTGTTCAACAA           TGCCGGGCGC GGC GCGCC-GGCC           GTGCCCATCGAGGAG  60 501
CXD84_RS06605 NONE
CXD84_RS06600 1326732 .. 1326742 -  -8.2  -4.09685   CCCGAGGGCGGAAAA                 GCCC CCG GGGC                 CAGCAAGCCCTCGCG  72 45
CXD84_RS06595 NONE
CXD84_RS06590 NONE
CXD84_RS06585 1323136 .. 1323162 - -13.6  -3.14132   TCGGGTGGCCAGCAA         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCCATCAAGCCCAAG  72 308
CXD84_RS06555 NONE
        bamC 1317094 .. 1317117 - -18.2  -5.78622   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 66
CXD84_RS06530 1311508 .. 1311536 - -20.3  -3.61398   CTGCGTGTGCAACAA        CTGCGCAACGCGC GCC GCGCGCCGCGCAG        GCCGGCATCAGTCGT 100 33
CXD84_RS06520 NONE
CXD84_RS06515 NONE
CXD84_RS06510 1306741 .. 1306755 -  -4.2  -3.14931   GCGATTCGGTATCAA               TCCATG CAG CATGGC               CAAACACTCCAAACG  45 52
CXD84_RS06505 NONE
CXD84_RS06500 NONE
CXD84_RS06495 NONE
CXD84_RS06490 1303041 .. 1303066 -  -8.2  -3.40403   GCCGCTGGACGACAA         GGCGGCCGCCG ATGCG CTGCGGC-GCC         TGCGCGGCCTGGACG  61 483
CXD84_RS06480 1301934 .. 1301965 - -14.6  -3.02829   CAGAGGCGGGTAAGA      TCGAATGGCTGTAT GGGC ATACAGCCATTCGC       GCGCCTGGGGCGCAG  74 50
CXD84_RS06475 NONE
CXD84_RS06470 1300253 .. 1300287 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 264
CXD84_RS06425 1287594 .. 1287626 -   -20  -2.64616   CGGGGACGGAGACGA     CGGTGTGCCTGTCCC AGCG GGGACAGGCAC-CCG      CACGGGCAGGCGCCT  95 77
CXD84_RS06420 1285990 .. 1286024 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 201
CXD84_RS06385 1279718 .. 1279759 -  -2.1  -4.01411   TACGAAAAACTCAAA TCCGGATCGTGGATATGCGG GCG CGGCATCGCCGCG-TCCGCA CGCTTACTGTGCCTT  56 29
CXD84_RS06380 1278286 .. 1278308 -  -9.8  -3.28712   CTGGGTGGTGGACAA           CCAGCACGGC GAA ACCGTGCTCG           AACTCGACGCCACCA  63 207
CXD84_RS06295 1264591 .. 1264621 - -19.6  -3.14344   CAGGTGGTGCAGTAA       GGCGGCGACCGGCG CGG CGCCCGGCGCCGCC       CGCCCGCATGGAAAA 100 79
CXD84_RS06280 1261387 .. 1261430 -  -9.4   -3.0127   CGAGGGAATTACAGA TCGCCTGAGCGAGGCAGCGG CGCT CCCCTGCCTGGGTGAGGCGC GCGTCCCCGGTTTCA  57 38
CXD84_RS06275 1259984 .. 1260032 -  -3.5  -3.39449   TCCGAGCAACATGAA GGGCTC-CTTCGCGCGCGCCGC GGCAAG GCCGCGCGCGCGCCGTGCGTCG TGCGCCTCAGCTGGT  49 32
CXD84_RS06270 NONE
CXD84_RS06265 NONE
CXD84_RS06260 1257838 .. 1257858 -  -3.3  -3.35046   GCAGTCTCGGAAAGA            CGGATAT TCCCAAT ATACCCG            TTGCCCGGCGGTCCG  46 59
CXD84_RS06255 1256994 .. 1257028 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 411
CXD84_RS06210 1249860 .. 1249877 -  -8.3  -4.13767   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT  72 151
CXD84_RS06175 NONE
CXD84_RS06170 1241690 .. 1241700 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 383
CXD84_RS06160 1240572 .. 1240606 - -12.9  -2.61582   CAGGGCATTCAGAAG    CG-CGGACCTGGCCTT GTAC AAGGCCAAGGCCGACG     GGCGCAATCGTGTCC  62 105
CXD84_RS06115 1231270 .. 1231289 - -13.6   -5.5112   GGGACCAAGAAAAAA            GCCCCTGA CGGA TCAGGGGC             TTGCAATGTCTGGCG 100 36
CXD84_RS06110 NONE
CXD84_RS06105 NONE
CXD84_RS06100 NONE
CXD84_RS06095 NONE
CXD84_RS06090 NONE
CXD84_RS06085 1223890 .. 1223908 - -13.8  -2.61264   GGCTCCATGGACAAG             GCCGCCCG GAG CGGGCAGC             GGCCTTCCATGATGA  69 111
CXD84_RS06080 1222636 .. 1222653 -  -7.7  -4.18197   AGTGCGTATGGAAAA             CGCCGAA GATG TTCAGCG              TGCCTGGACCTTGGC  74 20
CXD84_RS06075 1220226 .. 1220251 -  -4.7  -5.29846   AACCCGAAAGAAAAA         CCCCGCAGA CGCTCGGT TCTACAGGG          GTTTCCTGGGTATTT  93 107
CXD84_RS06070 1219308 .. 1219319 -  -3.6  -3.12668   CATCTGGAGACCCAA                GCGC ATTT ACGC                 CGGCGTCGGCGCCTG  45 85
CXD84_RS06060 1218029 .. 1218066 -  -9.8  -3.05384   TTTTTCTGGATCGAA   CCGCCGGTCA-TCAGCC AGGAA GGCTGACCGGCCCGCGG   GCCGTTATGCGCCAG  60 30
CXD84_RS06050 1217120 .. 1217157 - -10.5  -2.59742   CGCAATGGCGACAAT   CCGCAACCGCCCGCAGTC CGG GAC-GCCGGCGTTTGCTG   CGTTGCGGCAAATTT  57 153
CXD84_RS06045 1216648 .. 1216667 - -10.6  -5.40072   CGTGCCGCAAAAAAA            GGCCGCCC ATCC GGGCGGCT             TTTTCATTGATTTGC 100 53
        trxB NONE
CXD84_RS06010 NONE
CXD84_RS06005 1208079 .. 1208089 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 77
CXD84_RS06000 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 1199362 .. 1199382 -  -6.7   -2.8655   GGCACGCATACTATA            CGCGCGCCG CTT CAGCGCAGG            CGGTCCAGCGCCAGG  50 16
        kdpE 1195644 .. 1195678 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 203
CXD84_RS05935 1190155 .. 1190183 -  -5.8  -3.33261   GCTCAAGGCCTACAA        GCGTGGCGCCGC GGGCA GCGCGGCCACGG        CCAACGTGCGCAAGA  52 186
CXD84_RS05920 1188382 .. 1188395 -  -9.5  -2.75183   AGTGGCAGTCAATGA               GGCGC GACA GCGCC                GAGGCATGATAAGGA  55 87
CXD84_RS05915 NONE
CXD84_RS05910 1186135 .. 1186160 -  -7.5  -3.16881   GATCGACGCCACCAA         CGCCG-GCAGCG TCG CGCTGCACCGCA         AGCTGGGGTTCGTGC  53 148
CXD84_RS05895 1182141 .. 1182170 - -22.3  -2.62616   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 97
CXD84_RS05855 NONE
        recN 1172106 .. 1172146 -  -2.3  -4.75776   AAGCGAACTGAAAAA  CATGGGCCTGAAGGCGACG TTT CCCCGCCTGAAGATCCTTG  ACATTTTTCGTAAAT  76 453
        bamE NONE
CXD84_RS05835 1170321 .. 1170333 -  -4.7  -3.29144   CGATGGCCGCTACAA                GCTGG CCG CCGGC                TGGCTGATCGATCAA  49 263
CXD84_RS05825 1169188 .. 1169209 - -14.5  -5.63236   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 37
CXD84_RS05780 1158602 .. 1158617 -  -3.2  -3.40403   CCCTTCGCAGGACAA              GGCTTC GTGG GAAGTC               GAGAATAGCGTCGCG  48 53
CXD84_RS05775 NONE
CXD84_RS05770 1156093 .. 1156108 -    -4  -3.90588   TATGGGGTAATGAAA              CTTCTGG AAT CC-GAAG              GGGTATCGCTGCGCG  58 426
CXD84_RS05645 1130953 .. 1130985 -  -8.9  -4.07568   GCGCTTTGGCGAAAA      GCCCGCCGACCGCGC CGC GTACGCGCGGCAGGC      CCGCTTCCTGGCGGG  72 179
CXD84_RS05630 1128345 .. 1128395 -  -7.2   -4.0162   GGGCCACAGGAGAAA CAGCGGCGCCAGCATCCAGTCGAG GAT CTCGCCCAGCAGCGAGCGCTGCGG CGGCGCGAAACTCGG  66 105
CXD84_RS05625 1126950 .. 1126965 -    -4  -3.71917   ATCTTAAATTTGAAA              CAATAG GTAA CTATCG               CGCGTACCAGCCCGG  54 61
CXD84_RS05620 1125089 .. 1125117 - -10.9  -4.60041   AGGGAGCTTGAAAAA        GCCGGATTGGCGC AGC GGTCCAACCCGGC        GGGGGATGGTTATCA 100 38
CXD84_RS05575 1116288 .. 1116301 -  -9.5  -2.70932   CTTCTTGTGCAATCA               GGCCC GCGC GGGCC                TAGGAGAGGGCTTCG  55 25
CXD84_RS05570 1114737 .. 1114759 - -19.2  -5.53288   CGCAAGGCAAAAAAA           GGCCCGACAC ATC GTGTCGGGCC           CGTACGGGGCACGCA 100 243
        rdgC 1113022 .. 1113047 -  -6.7  -4.68724   TGATCGAACAGAAAA         GCACG-CTGGCC GAG GGCCTGGCGGGC         GCGGACGTCATTTAC  82 434
CXD84_RS05535 1109952 .. 1109999 - -21.2  -4.15788   AACGTGCTCAAGAAA GGGGCTGAGCAAGGCGGCCGGC AGGC GCCCGCCGGCATGCTCAGCCGC ACTGGCGCTGGATCG 100 18
CXD84_RS05515 1107426 .. 1107484 -  -2.2  -4.33153   GCCAAGATCAACAAA CTGGAGCTGTAG-TCCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGCTTCCTCGGC-CC-G TGCGCGCGTGGACAG  65 78
CXD84_RS05505 1105460 .. 1105470 -  -6.8  -3.03159   CGAACGCGCCCAAGA                 CGCT GCG AGCG                 GTCATTGATTGGGCT  51 121
CXD84_RS05460 1098022 .. 1098056 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CXD84_RS05450 1095661 .. 1095673 -  -3.4   -4.2349   CGCGCAGATCGAAAA                TTCC TCGCT GGAA                CAAGGACTTGTCCAG  63 69
CXD84_RS05440 1094236 .. 1094270 -  -2.1     -3.94   GCAAGCCGTAAACAA    CGGGACGTCCTACGCCA AGC TGGCAT-GGACG-CTAG    GTGTGAACTGTCAAT  56 22
CXD84_RS05415 1090683 .. 1090717 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS05345 NONE
CXD84_RS05320 1072005 .. 1072049 -    -7  -3.67792   GTAGATTCAGGGAAA CCACGGGCACGACCGTCA-CC AAGT GGCTGAATGCCGAGCGCGTGG CGCGCGCCCAGCAGT  64 358
CXD84_RS05310 1069952 .. 1069999 -  -8.4  -2.55544   TCATCACGGAAGTGA CCATCGGCTTCAACTATGCGCTG GGC CAGGTCAC-GGTGACGCCGATGG CGCTGCTGATGACCT  51 224
        sulP 1064255 .. 1064270 -  -3.9  -3.54424   GGTGAGCGCCGGAAA              CAGCC TGACCG GGCCG               GGGCCGCTCGCCAGC  51 379
CXD84_RS05230 1052749 .. 1052762 -  -4.5  -3.54459   CCAAGTCGTCGCAAA               GCC-GG AAT CCTGGC               GACGGCCTGCCACCG  52 57
CXD84_RS05200 1046719 .. 1046740 -  -2.9  -2.65264   CGACCACGCACAGCA           GCATGCC-GT CGT ACTGGCTCGC           CGCCACCTACCGCCT  39 47
CXD84_RS05155 1035876 .. 1035893 -  -4.1  -4.31943   GGTACAGAAAAAAGA             TGAAGCG TCCC CGGTTCA              TGGCGGGCGGCGGGA  68 42
CXD84_RS05150 1035074 .. 1035097 - -16.7   -3.0806   GCGAAATCCGCAAGA          GGCGGCGCG CCGATC CGCGCCGCC           GGCGCGCGGGCCCGG  81 48
CXD84_RS05145 1033777 .. 1033787 -  -2.4   -4.4078   GCTGGCCAACGAAAA                 GCCC CAG GGCC                 AGACCATCGCGTATG  68 83
CXD84_RS05115 1026886 .. 1026909 -  -2.2  -4.07568   TTCGGGGCGGGAAAA          GGGGCTGGGC AGGC GCTCAGGCCG           CGGCGGCGCCTGCCG  58 18
CXD84_RS05110 NONE
CXD84_RS05105 1024168 .. 1024193 - -13.3  -2.57132   GGCGCCCGGGATAAT         CGATACGCCGC TGAC GCGGCACATCG          TGCAGGATCGCCAGG  66 269
CXD84_RS05075 NONE
CXD84_RS05070 1017766 .. 1017803 -  -2.5  -4.58395   CGCACGCTGGAAAAA   GCTGATCGACGAGCGCGG GAT CCGCGCGAATTGA-CGGC   CGCGGCCTCGTGCCG  70 112
CXD84_RS05055 1014584 .. 1014626 -  -3.9  -3.84406   CCGCTATGACAACAA CGATCCGCGCCCCTGGCTGG CCGG CCAGGCAGGCTGGCGGG-CG CGCGCTAATTCGGCC  58 339
        queE 1012506 .. 1012528 -  -4.8  -3.64703   GGCGGGTGACGGAAA           TCATCGCG CATCTCC CGCGATGG           GACGGACAGTCATGG  55 35
        queD 1011801 .. 1011825 -  -7.8  -3.31792   GTACGACGCCCACAA         CATCCCGGCGC TCAA GCGCCTGG-TG          GGGCAGGGCGCCAAG  55 266
CXD84_RS05015 NONE
CXD84_RS05010 1008545 .. 1008562 - -11.3   -4.1822   GCCGAGCCGAAGAAA             GTACCGC CCAG GCGGTAC              ACCGCCTTGGAGCGC  89 192
CXD84_RS04995 1006209 .. 1006236 -  -5.5  -2.53263   GCGATGCGCAATTGA        TCGGCG-CCGAC CTGGT GTCGACCGCCGG        GCAGGGCCGCGTGCA  42 428
CXD84_RS04980 NONE
CXD84_RS04975 NONE
CXD84_RS04970 NONE
CXD84_RS04965 NONE
CXD84_RS04960  990069 ..  990083 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
CXD84_RS04950  988251 ..  988297 - -12.1  -3.35679   GCGCGTCATCGACAA GCGGCCG-CGCTGATCGCGGCG GGTT CGCAGGGCGCAACGCCGGCCGC CATGGCCGGCGTTGC  73 45
        paaX  977535 ..  977560 -  -4.6  -3.62597   CGGACCGGGCAACAA         TGGCGGCGAC GCGCTG GTGGCGGCCA          CGCTGCTGCAGGCGC  54 497
CXD84_RS04875 NONE
        rsgA  974531 ..  974555 -  -4.3  -3.78419   GGAGGAAAGATACAA         GGCACC--CCG GGAGT CGGCAGGTGCC         TGTCCTCGTGGGGAC  58 56
CXD84_RS04840  968011 ..  968063 -  -7.4  -3.36054   GAAAGCCATAGAACA GGTCGGACGGCAGGTGCAGGCC CTGCGGGTC GGCCTGCGCCAGCAGGCCGCAC GCGGTGGTCTTGCCC  59 151
CXD84_RS04820  964657 ..  964667 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS04815  963150 ..  963177 - -11.2  -3.77119   CATCAACGAATACAA        GCGGCGC-CAGGC CCC GCCCGGGCCCCGC        ATCACGCCGCGCGCG  74 501
        argH  958648 ..  958665 -  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 49
CXD84_RS04775  955171 ..  955204 - -13.1   -3.0497   AGAGTATCTGGAATA     CCGACGCGCTGCGCGC CAT GCGCGAAGCG-GTCGT     GTACGGAGTGCCGTC  70 111
CXD84_RS04765  952657 ..  952667 -  -2.4  -3.02381   GCAGAACACCATAGA                 CCGG CAT CTGG                 GGGAATTGGTTTCCG  41 119
CXD84_RS04760 NONE
CXD84_RS04750 NONE
CXD84_RS04745  947615 ..  947646 -  -5.6  -3.14132   CGTGGGGGCGAGCAA      GCCGCGCCACCTGG AGGA CGCGGTGGCGGCGC       TGGCCCTGCGCCTGA  47 102
CXD84_RS04730  943878 ..  943897 -  -2.8  -3.53761   CAAGGGGCGGCGAAA            GCG-CGC ATCTTGG GCGTCGC            GGGGGCGCTTGTCAA  49 37
CXD84_RS04725  943271 ..  943305 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGACTTACGC  48 191
CXD84_RS04625  922773 ..  922784 -  -5.8  -3.53811   TCGATCTGCCCGAAA                CCCT GACC AGGG                 TGCAGCGGCGCGATA  57 414
CXD84_RS04615  921238 ..  921285 -  -4.1  -2.71712   GCGCGGCGCCGAAAT CGCTACACTGGACGTACGGGCGCG CGC CG-GCGCAT-CGGCC-GCGCAGCG CCCAAGGAGGCGATC  41 220
CXD84_RS04595  917862 ..  917896 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS04580  914243 ..  914258 -  -3.2  -2.87132   TGGCCTCCTTACAGA              TCCTCG GAAC CGAGCA               GCATCTCGGTCAGCC  41 3
        ilvN  913708 ..  913735 -  -8.2  -2.55074   GTGAATGCTAATGCA        GGGTGGCGCGCC GCCA GGCGCGCCGGTC         AGATTTTCAGTATCC  52 24
        ilvC  912578 ..  912595 - -14.1  -5.79595   GCGGAAAAGAAAAAA             CGCGCCC CGTG GGGCGCG              TCTGGACCAGCCTGC 100 75
        pssA  911511 ..  911524 -  -8.1  -3.27022   GCCAGCCGAGATCAA               GCAGG TCGG CCTGC                CCAGCGTGCGCCAGG  56 199
CXD84_RS04555  910921 ..  910944 -  -4.5  -3.63367   GGTTTCAAGAAAAAC          GAGC-CCCGA GACAA CCGGGCGCCC          TGTTACGCTGTTGCC  55 28
CXD84_RS04550  910525 ..  910560 - -16.8  -5.04601   CTTACAAATGAAAAA    CCGTGGCCGTTGCGAC ATGC GTCGCCCCGACCACGG     TTGCGTCATGGGGAG 100 54
         pnp  908297 ..  908314 - -14.1  -4.66163   ATGCGGACGCAAAAA             CGGCGCC CGCG GGCGCCG              TTCTTGCGTCAGGAA 100 50
CXD84_RS04540  907299 ..  907333 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS04530  904860 ..  904883 -  -3.7  -3.73775   CGCAGCCTTACGAAA          CGGGGCTGC GCTACA GCGACCCCA           AGGATTTCCATGTGA  55 336
CXD84_RS04515  902933 ..  902965 -   -14  -4.66318   ACCAGGGCAAGAAAA      TCCGGGCGCACCGG GCGAT CCGGCGCGCCCGCC      GTCCGGCTGGCGCTA 100 38
CXD84_RS04510  902073 ..  902085 -  -5.5  -3.02074   CAAAGACATTACAGA                CTCCG GAA CGGAA                ACTTAAGCTGCGGCG  47 28
        secG  901581 ..  901610 -    -3  -4.09685   CGGCATCCTGCAAAA      CTTCGACCAGGATC CGAA GATCCTGG--AAAG       TCGGGCATTCTAGCA  59 35
CXD84_RS04500  901399 ..  901424 - -13.3  -4.91109   CCTGGACGACAAAAA         GCCCATAGGCG CTGA CGCATATGGGC          TTTTTTGCTGGCTTT 100 86
CXD84_RS04495  898478 ..  898503 -  -2.4  -3.58343   CGGAGCATCGGGAAA         CCGAACTGGC GCAACT GCTGGTCCGG          GAGGCCGGGGCCCTG  50 123
CXD84_RS04485  896240 ..  896278 - -12.4  -3.87994   AGTGATGCCGACAAA  CCGCCCGCGCCGT-GCG GACGGA CGCTACGCCGCGGACAG   GCGCGTCCGATAGGA  81 11
CXD84_RS04480 NONE
CXD84_RS04475  893266 ..  893276 -  -2.4  -3.35679   CGGCCCGATCGAGAA                 TCGC TTC GCGC                 AGGGCCAGCACCGAC  46 494
CXD84_RS04465  891069 ..  891097 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGTGCGGTGG  56 91
CXD84_RS04460  889587 ..  889601 -  -5.6  -3.53091   AGGCGTGCGGCCAAA               GCATCG AAG CGCTGC               GCGAGGAACAGCAGC  52 374
        metC NONE
CXD84_RS04440  885472 ..  885530 - -18.7  -4.56597   TTCTTCGTTGAAAAA GGCCACGCGCCGCGGGCGCGGGCCGAACG CAA CCACCGGCGC-CGCCCGCGGCGC-CGGAC CTGCTCGAATCGGAA 100 66
CXD84_RS04435 NONE
CXD84_RS04430  882374 ..  882386 -  -3.3  -3.63627   CGTTCAGATGCGAAA                CGCCA CGG TGGGG                TCGGACCGGACCTTG  53 1
CXD84_RS04405  874964 ..  874988 -  -5.6  -4.00042   CGCGCCATCAAACAA         TGCGGC-CGGC CCGC GCCATGCCGCG          CAACCCATGCTGCAA  63 63
         azu  874253 ..  874274 - -11.5  -2.62184   TGTTTCGCGAGATCA           TCGGCCCGC AGGC GCGGGTCGA            GCGGGCCGAGCACAT  59 142
CXD84_RS04370 NONE
CXD84_RS04365 NONE
CXD84_RS04360  863159 ..  863172 -  -3.7  -4.35461   TCAAGACGATGAAAA               GGGGC TCGC GCCCG                CTCAGGCCGCCGCGT  68 59
CXD84_RS04355  862231 ..  862253 -  -3.3  -3.38046   TGGGTATCCGAAATA           TGCAGCACG CGCAT CATGCCGCC           TCCAGCCGCTGGCCA  48 16
CXD84_RS04350  861409 ..  861423 -  -9.2  -3.14795   AAAGGTTCACGAACA               GCGGCA TCG CGCCGC               GGCGCGCGTCATCCG  59 34
CXD84_RS04345  860415 ..  860430 -    -6  -2.66326   TGAACGGGAAATCGA              CCGCAC CCTG GAGCGG               TTCAGCGACGGCAAG  45 207
CXD84_RS04315  856673 ..  856708 - -26.4  -4.24326   AAACATGATTCAAAA    GCGAAAAAAGCCGCCC CGAA GGGCGGCTTTTTTCGC     GCGGGCACGAGGCCC 100 86
CXD84_RS04310 NONE
CXD84_RS04305  855686 ..  855702 -    -5  -3.05384   GGCGGCGCGATCGAA              CCGCGC CGCCC GCGCCG              GTGGTTCAGCGCGCA  45 31
CXD84_RS04300 NONE
CXD84_RS04295 NONE
        nuoE NONE
        nuoF NONE
CXD84_RS04280 NONE
        nuoH NONE
        nuoI NONE
CXD84_RS04265 NONE
        nuoK NONE
CXD84_RS04255 NONE
CXD84_RS04250 NONE
        nuoN NONE
CXD84_RS04240  841540 ..  841556 - -13.7  -5.78622   GTAGGCGAAAAAAAA              CCGCCTC ATG GAGGCGG              TATCGCTGAAGCGGC 100 50
CXD84_RS04235  839002 ..  839022 - -11.8  -4.98531   GCCGGAAATGAAAAA            CGGCCCCC TTGCG GGAGGCCG            TCGGAACGGCGGGGT 100 52
CXD84_RS04230  836527 ..  836543 - -15.1  -6.09133   CATGCCAAAAAAAAA              CCGGCGC AAT GCGCCGG              TTTTCCCTGCTGCGC 100 49
CXD84_RS04225  835666 ..  835695 - -10.6  -2.65808   ACCGCCAAGAACGCA       GTCGTCGGCCTG ACCCGG CAGGCCGCCGGC        GAAGTGGCCGAATTC  55 266
CXD84_RS04205  831150 ..  831179 - -23.7  -3.03006   AGTAAGCCACACATA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        ATGAACACTTGACGG 100 114
CXD84_RS04190 NONE
CXD84_RS04185  825545 ..  825555 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS04175  824496 ..  824527 -  -8.7  -3.61398   CCTGGGTTCGAAGAA      CGAGGTGG-AGCGC GTGGG GCGCTACCACGCCG      AAGCGCACGCCAGCT  62 39
CXD84_RS04160  819958 ..  819968 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS04155  818899 ..  818920 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CXD84_RS04150  817758 ..  817777 -  -4.4  -3.45571   GTGGGGAAATATCAA            TGTATACA TGAC TATATACA             TCAATGGATATCGGC  51 162
CXD84_RS04145 NONE
CXD84_RS04140 NONE
CXD84_RS04135 NONE
CXD84_RS04130 NONE
CXD84_RS04125 NONE
CXD84_RS04120 NONE
CXD84_RS04115 NONE
CXD84_RS04110  808466 ..  808506 -  -3.6  -3.65046   TTGTCATTGTAATAA  CTCCTGGCCGGGCGCCGG ACGGG CCGGCGGCGGGCGCCGCG  CGGCCCGCCGCTCGA  54 44
CXD84_RS04105  807584 ..  807597 -  -5.9  -2.78935   ATATCGGCCAGTATA               GCGGC GGCA ACCGC                GAGCACACGGGTTCG  46 86
CXD84_RS04090 NONE
CXD84_RS04085  802986 ..  802997 -  -5.8  -3.01712   GTGTTGGCTTGAACA                TGCC TCAG GGCA                 TGTAGAAGCCGCCGT  47 18
CXD84_RS04080 NONE
CXD84_RS04075  800826 ..  800837 -  -5.8  -3.93695   TTCACCAGCGAGAAA                GACC TGCG GGTC                 AATCCGCTGGCGCAA  63 522
CXD84_RS04015  784982 ..  785001 -  -4.3  -2.71144   TACGGCCGCGAAGGA            TCGCGCCA TGGCC TGGC-CGA            GTACATGCAGATCAA  40 84
CXD84_RS03980  774897 ..  774922 -  -8.9  -3.70902   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG  65 63
        rplU NONE
CXD84_RS03955  771384 ..  771405 - -17.3  -5.45802   GCCTGAAAACAAAAA           GCCCTGCCG CGTG CGGCAGGGC            TCGCCGTTCCGGGGA 100 53
        obgE NONE
CXD84_RS03945  768884 ..  768906 -  -4.1  -3.13073   ACGGTCAGGAATACA           GGACAAATC GGAGG GGCTTGTCC           GGCATGTTGGTTGGT  45 62
CXD84_RS03935  767158 ..  767192 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 310
CXD84_RS03920  765827 ..  765850 - -10.2  -4.41348   TCTCGCTGAAATAAA          GGCGCGCGCCC GGT GGG-GCGCGGC          AGGGGCATTATTCCA  88 56
CXD84_RS03915  763445 ..  763455 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 183
CXD84_RS03910  762379 ..  762423 - -10.6   -2.8294   TATGGTGCACAAGCA CCTCACGCGC-GCGCTA-CGGC ACT GCCGCTCCCGCTGCGCGCGTGG GAACACGGCGCCGAT  57 43
CXD84_RS03900  760714 ..  760744 -  -6.2  -4.27584   ATGTTTAACCGAAAA       GAGATTGAAAGTAA TTA CCACTACCAATCTC       TAAGACGGAACGGCC  70 135
CXD84_RS03895  758085 ..  758098 -  -3.7  -3.36803   CAAGGGCATCGACAA               GCCGG TGGT CCTGC                AGGCGCGCCGGAACG  47 217
CXD84_RS03870 NONE
CXD84_RS03865  751478 ..  751501 -    -3  -4.17556   GAGATCCGCAAGAAA          GTCGAACAGG CGCG CGTGTCCGGC           TACGCCGTCACCATC  61 285
CXD84_RS03855  749006 ..  749016 -  -6.8  -3.09516   CGCCGCAGGATGTAA                 CCGA ACA TCGG                 CCGCCCCTTGTGGAT  52 101
CXD84_RS03850 NONE
CXD84_RS03845 NONE
CXD84_RS03840 NONE
CXD84_RS03835  744091 ..  744101 -  -2.4  -4.41348   GGGCTGGGAAATAAA                 CGGG TTA CACG                 GGGTCCACCGGGACG  65 19
CXD84_RS03830  742463 ..  742502 -  -5.7  -3.54408   TCCCAGCGAAATGAA CTGCTCGGTCG-CGCTGTC GGCC GACAGCGACG-CCGAACTC  CTGGAAGCCGCGGTC  57 197
CXD84_RS03820  741097 ..  741107 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 121
CXD84_RS03815  740037 ..  740058 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CXD84_RS03805  738819 ..  738846 -  -6.2  -2.79188   CATCGAAGGCAACTA        CGCCAACG-GCCG CCG CGGCACGCTCACG        CCCGATCCGCTGGCG  46 163
        lptD NONE
CXD84_RS03780 NONE
        rsmA  731232 ..  731270 - -10.3  -3.01712   CGCTGCGCGGCAAGA  CCCCGGCCGGCG-TGGC CCGCATC GCCAGCGCCG-CCGGCG  TGCCGGTGGTGGCGC  59 254
         pyk  728313 ..  728346 -  -5.2  -3.61398   GGGCGCCTGGAAGAA     GGTGCCGGTCTACGA GACCT TCATCG-CCGGCGCC     AAGGACGGCTTCAAC  54 454
CXD84_RS03675 NONE
CXD84_RS03670  712080 ..  712117 -  -6.1  -2.66787   GCAACAGCGAGATGA   GCAGCGCCCGGGCCCACC AGC GGCGTGCGCG-ACGATGC   GCGCGAACGCTCAGC  46 36
CXD84_RS03660  710817 ..  710832 -  -6.2  -5.00616   TTGTGGCCCAAAAAA              CTGTAT GGAC ATACAG               TGTATGCGAGCATAG  86 294
CXD84_RS03645  709995 ..  710017 -  -7.6  -3.63991   GATGACGCTCAAGAA           TTGGCCGCCG CTG CGGCCGCTAA           TGCTGTTGGCGCTCG  60 278
CXD84_RS03525  693518 ..  693528 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS03475 NONE
CXD84_RS03470 NONE
CXD84_RS03465  683959 ..  683976 -  -3.3  -3.54424   GTTGACGCCCTGAAA             GCGTTCGC GCA GCGC-CGC             CGCTTCTTCCTCGAT  49 52
CXD84_RS03460  682875 ..  682890 -  -4.6  -3.01712   GGGGTCTCTGCAACA              CGTGCC CCAG GGCACT               GTTGGTTTTGCGCTG  45 47
CXD84_RS03455  682477 ..  682492 -  -3.2  -3.94438   CATGCTAACAAAATA              GCAAGC ATAT GCTTTC               TTCGGATGTCGGGTG  58 167
CXD84_RS03440  679264 ..  679287 -   -21  -2.60496   GGCGGCCTGAAACAG          GGCCGCCGCG CCAG CGCGGCGGCC           GCGCGCTTGCTTACC 100 36
CXD84_RS03405  672879 ..  672919 - -12.4  -2.73875   TTCCTCGGAATACGA CCCTGAAGC-GGCGCGCGC CCGG GCGCGCGCCGGCCACTGCG  ACACCCGCGCTCAGC  65 36
CXD84_RS03400  671405 ..  671434 - -15.7  -3.01712   CCCCTGGCTGGAAGA       GGACGCGGCG-GCC TGA GGCGCGCCGCCTCC       GCGTGCGTCAGGCCA  77 33
CXD84_RS03385 NONE
        recQ  666953 ..  666980 - -16.2  -3.14344   GACGGCGCGCACGAA        GTGGCGCGCCGC TCGC GCGGCACGCCGC         GTATCGCCAACCGCC  80 410
CXD84_RS03370  665113 ..  665131 -  -6.6  -3.40403   TTCCGCCGATGACAA             GGATACGC ATC GCGCAGCC             CCCTGTAGCATCATT  55 90
CXD84_RS03365  663978 ..  664008 -  -6.6  -3.39784   GCATCGGCAAGAAGA       CCGCGGAGCGCCTG CTG CTGGAGATGCGCGG       CAAGCTGGGCGCGGA  55 228
CXD84_RS03330  658153 ..  658206 -  -6.5  -3.18264   CTGGTGACCGAGGAA GGCTGCGAACTCA-TCACCCGCGGCG TGC CGGTGCAGGCGCGCGAGATCGAAGCC CTGATGCGCGAATAG  51 50
CXD84_RS03320  655310 ..  655334 - -14.3  -2.87132   TGCGCGTCGGACATA          CCGCACCCTGC ATG ACAGGATGCGG          CAGATGGGTGCTCTG  71 218
CXD84_RS03315  654582 ..  654596 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 215
CXD84_RS03305  652526 ..  652537 -  -2.2  -3.53566   AGCCAAGAAGAAAAG                CAGA CTGG TCCG                 ATGCCAAAACCCGCA  48 224
CXD84_RS03300  651277 ..  651315 - -18.8  -2.79831   GTCATCCGAAAACAG   CCAGCAGGTGGCGAGGCG CGA CGCCTCGCCGCCTGATTG   TAGTTGACGACGCGC  87 58
CXD84_RS03295  650340 ..  650372 -   -10  -3.53012   GCCCTGGGCCGCAAA     TACCACGGCCTGATT CCGG AATAAGGCCG-GGTA      TCGAAGCCGCGCTCA  67 38
CXD84_RS03285  647884 ..  647903 - -11.4  -3.21354   GCATACAGCCAGCAA            TCGCGCGG CTGG CCGCGCAA             CGCTGCCGGCATCCA  66 53
CXD84_RS03260 NONE
CXD84_RS03255  643771 ..  643785 - -12.8  -4.27316   CGCCCCAAGGCAAAA               GCCCCC CTG GGGGGC               AGCAAGCTGGCGCAG  91 69
CXD84_RS03250  642006 ..  642024 -   -11  -3.13403   GCTGGGCGAGGAAGA             CGTCGAGA ACT TCCCGACG             CTGCTGGTGCAGGCG  64 190
CXD84_RS03240  640887 ..  640897 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS03235  639847 ..  639872 -  -9.7  -5.00616   GGTTTCCGGAAAAAA         TG-AGGCCCCCC CCG GGGGGGCGTGCA         GGGCAATGCGCTAGA  95 36
CXD84_RS03230  638873 ..  638901 - -12.3  -2.87132   GTGGTTGCGGATAGA        TGCCGCCCCGGGG CGG CGCCGATGCGGCA        CCGCAACAAGGAGCA  66 139
CXD84_RS03225  637838 ..  637850 -  -9.1  -3.71917   ACCGGAAACCGGAAA                CGACC CCA GGTCG                CCTGTTAGTCAGGCT  68 183
CXD84_RS03220  633323 ..  633381 - -22.6   -2.5474   GAAAAGCAATAAAGG CCGCGTCCCAAT--G-CGGCCGGGCCGCGC ATC GCGCGGCCCGGCCGGCCGATCGGG-CGAGG CCTGCGCGCCCGCCG 100 57
CXD84_RS03210  631287 ..  631307 -    -9  -5.40072   CCTTGGGCAAAAAAA           GAGGCCACC CGAA GGTGGCC-C            GAATTCCAGCTCTGC 100 95
CXD84_RS03180  626449 ..  626471 - -16.2  -3.34715   GACGTGCTGGAAACA           GGCTGGCCCG AAC CGGGCCGGCC           GCCCCTCATGGTGTC  82 158
CXD84_RS03120  615361 ..  615409 - -13.8  -3.35679   CCCTTCCAGTGAGAA CGGGCCATCG-GCCCGG-CCGC TGTCGGC GCGGACCGGGCACGCCGGGCCG CAACGACCTGCGGCG  77 207
CXD84_RS03115 NONE
CXD84_RS03110 NONE
CXD84_RS03105  611669 ..  611718 -  -9.7  -5.07011   CAGATAAAGGAAAAA CGATCCCGGGCCGGGCGGCGTCC CGAC GGACGCCCGCCAGCCCTAATACG CGCCGCCGATGCGGT  95 18
CXD84_RS03095  608345 ..  608396 -  -3.6  -3.14132   GGCCTCGCGCATCAA CGCCTCCTACGCCG-ACCCGGC CTGGCTGGCC GCCGGGCGCGGC-TCGGGCGCG CTGTGAAGGGTGCAA  45 125
CXD84_RS03085  606512 ..  606528 - -13.7  -5.60993   CGCCTCAGAAAAAAA              GCCCTCC GCT GGAGGGC              TTTTTCGTGGGCCGC 100 47
CXD84_RS03070 NONE
CXD84_RS03065 NONE
        ftsY  598430 ..  598455 - -20.5  -2.90496   CCGTTCTGGAAATGA         CAACGCCGCCC GGAC GGGCGGCGTTG          CGGGCAGGCGCGAAC 100 46
CXD84_RS02985 NONE
CXD84_RS02980 NONE
        nusB  587969 ..  588001 - -11.1  -3.72695   ACTCCTGCCAGCAAA      CGCGAACGGACGCGC CGC GCGGGCGCGCCCGCG      GAAGGTCAGCGCCGC  73 31
        thiL NONE
CXD84_RS02965 NONE
CXD84_RS02960  585712 ..  585755 - -14.4  -3.28745   GCGGTAAGAACGTAA CCCCCCGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCGCTGAC TTCTCAGGGTGCCTG  75 119
CXD84_RS02935  578759 ..  578782 - -19.6  -6.06723   CTTCCCAAAAAAAAA          CCCCGCCAGG TTCG CCTGGCGGGG           TTTTTCATTGGAGCT 100 44
CXD84_RS02885  568035 ..  568045 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 192
CXD84_RS02875 NONE
CXD84_RS02870  566068 ..  566082 -  -3.4   -4.2828   CCGCATCCAGGAAAA               GGCGAC CGT GCTGCC               CGATGGCGGCGAAGT  67 245
CXD84_RS02855  563287 ..  563313 -  -2.8  -5.06103   ACAATTTGCAAAAAA         TAGCCAGACCGC TGG GCAGCCGGACAA         GCCGCGCTGCTCCCG  79 442
CXD84_RS02845 NONE
CXD84_RS02840  562504 ..  562547 - -22.8  -2.72471   GCGCCACCAGAGAAT TCAAAACAAAATGCCCGCAA TCGC TTGCGGGCATTTTGTTTTGT GCGCGATGAAGGACA 100 80
CXD84_RS02820 NONE
CXD84_RS02815  557659 ..  557672 -  -5.9  -3.30474   GTTCACAACTAGCAA               GGCCG GCTA CAGCC                AGCGCTCGAACAGGC  53 18
CXD84_RS02790  551932 ..  551954 - -12.7  -4.57569   TGATGTGCCCAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGCC 100 57
CXD84_RS02780  550986 ..  551014 - -15.4  -3.72576   CCTGCCTTCATGAAA       GCCCCGGTCAATC GCAT GATTG-CCGGGGC        TTTCTCTTTGCCGCG  85 46
         rnr  547973 ..  547998 -  -6.7  -4.08064   AACGCCGCCGGAAAA         CGGCGGC-GGGC CGG GCCCTGCGGCCC         GGTCTACGGTGCAAT  67 80
        rlmB  547157 ..  547179 - -12.6  -3.03124   TCGGACGTTCGAAGA           GGCGCGCGGC GCG ACGGCGCGCC           GCTGCAAGAGTTTAC  67 37
CXD84_RS02760 NONE
CXD84_RS02755  545078 ..  545092 -  -3.4  -4.66537   GCTGTCAAGAGAAAA               CAGCGC CCT GAGCCG               CGCCAATACTAGCTT  71 105
CXD84_RS02750  544550 ..  544562 -  -9.1  -3.64703   GTTTTGTTAGGCAAA                TCGGC AGC GCCGA                TTTGCCTTTGCGTCC  68 42
CXD84_RS02745  544295 ..  544328 - -12.4   -5.4505   GCGCGCAACAAAAAA    CCCCGTGCG-GTGCGC CGAT GCGCCCTCGC-CGGGG     TTATTGCGCCTGCTT 100 92
CXD84_RS02740 NONE
CXD84_RS02735 NONE
CXD84_RS02730 NONE
CXD84_RS02725 NONE
CXD84_RS02720 NONE
CXD84_RS02715  537913 ..  537925 -  -4.7  -3.69068   GGACGGCAAGAAATA                GGCGG CAA CCGCG                CGAGGGTGCCTGTCC  55 98
CXD84_RS02695  533387 ..  533445 -  -4.3  -3.15544   GGGCACCCGGACGAA TTGGCGGCGGGCCACTGGACGGTGGGCTA CGC CAGCCCACAGACCGGCCGCGCGCTGCC-- CTGGGAATGCGCCAC  45 331
CXD84_RS02665 NONE
CXD84_RS02660  527552 ..  527562 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS02655  526536 ..  526548 -  -4.7  -3.57144   GGCCCGAGCCGCAAA                GCGCC CCG GCCGC                TAGCTGTGAACTGTC  54 25
CXD84_RS02645  524136 ..  524164 - -13.1  -3.14564   GCAGCTGCGCATGAA        TGCCTACGCCACC CAT GGCGGCGTGGACA        AGAAGCGCTTCGAGC  68 275
CXD84_RS02615 NONE
CXD84_RS02610  518686 ..  518712 -  -6.4  -3.87373   CAGATCGGCCAGAAA         GGCCACGGCAAG GCC CTCGACTCGGCC         CACTGAGGGCCGCTT  62 50
         smc  513581 ..  513602 -  -2.9  -3.28447   TCACTCATGAGAATA           TCCCGC-GCC TAA GGCAGCGCAA           ATCCGAATATGGGTT  46 41
CXD84_RS02595 NONE
        ligA  510362 ..  510391 - -19.5  -3.15663   AGCCATCGCCATCAA       CAAAATTGCCCGC TTTC GCGGGCAATTTTG        TTTTCGGCTGCCGGG 100 59
CXD84_RS02565 NONE
CXD84_RS02560 NONE
CXD84_RS02555  506217 ..  506233 -  -4.3  -3.05471   AGTATCAAATAACCA              CCCCGAC CCC ACCGGGA              TCAACCCTAATCCGG  45 131
CXD84_RS02550  504844 ..  504867 - -19.6  -2.62735   ACACGGCGCATACGA          CGCACCGGCC CTCA GGCCGGTGCG           AGGTGAAGCAGGAGA  93 101
CXD84_RS02545 NONE
CXD84_RS02540  501568 ..  501587 -  -7.8  -3.29461   CAAGGGCTTCGACAA            CGCCATCA TGCT CGACGGCG             CGGGCCATGTCGCGG  55 392
        pncB  489760 ..  489777 - -14.1  -4.17048   GGTTGGCGAAAACAA             GCCGGCC CTCA GGCCGGC              GGAAGCTGGAACACC  91 16
CXD84_RS02470  489238 ..  489277 -   -18  -4.08945   ACCATCCCGGCAAAA  TGAAGGCATTGCGGCATC GGCC GATGCCGCAATGCCTGTA   CCGTCCCGAGGCGCG 100 114
CXD84_RS02455  485518 ..  485532 -  -4.2  -4.09685   CCGGAGCGTGCAAAA               GACCTA GTG TAGGGC               ACGCGGCCGCCCCCG  61 64
        argE NONE
        trpB NONE
CXD84_RS02440 NONE
CXD84_RS02435  481206 ..  481237 - -10.8  -4.67353   GCATGCATGGAAAAA      TAACAACGCCCGGC CTGG GCCGGGCGTTCGCA       GGCACTGCCGGCGGG 100 46
CXD84_RS02425  479200 ..  479253 - -13.7  -3.68359   GCCGGAAAATCATAA GACCACTCCTCGGGTGCCTGTCCCC GCAG GGGGACTGGCACCCGCCAATTGTCC CCGCTGCGGCAAGGG  80 86
CXD84_RS02420  478063 ..  478089 - -23.8  -3.92869   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 66
CXD84_RS02410  473443 ..  473455 -  -4.1  -3.42809   AATACCACCAACGAA                TAACC CAT GGTCA                GGCCGTCTCCAGTTG  49 23
CXD84_RS02405  472672 ..  472729 - -15.6  -3.27408   TCTTACCCAAATAGA CGGTGGCGTGCGCCGCGCTATTCCGTCGC CGG GCGACGG--CAGCGCG-CGCATGGCGCCG ATCCAGGTAAGACAG  80 75
        msrP  471670 ..  471686 -  -2.1  -3.16564   TGGGGACCTCAGTAA              TTGGCCC GCA GGTCCAG              GCCCTGGTAGAGGCT  42 2
        msrQ  470793 ..  470827 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS02370  467539 ..  467570 -  -5.1  -4.03234   GTTGCGGCATAGAAA      GCTGACGCCCGC GGCCGCCAG GCTGGCG-CAGC      TGGTGCGCGACCTGA  63 77
CXD84_RS02360 NONE
CXD84_RS02355  464581 ..  464630 - -13.5  -3.96148   GTTTTCCACGATAAA CGGCTGGCCCAGCGCCGCGGCCA GCTTTT CGCCCGCGGCGC-GGGCG-GCCA CGTCGGTGGCCTGGC  84 219
CXD84_RS02345  463502 ..  463519 -  -2.7  -3.14132   CTGCTGCTGGACGAA             GGCAA TGCCTATC TTGCC              GCGGGCCTGGCCGGC  43 303
CXD84_RS02335  462139 ..  462184 - -10.4  -3.05384   CCCTTGCCCATGTAA TGCGTGACGCGCTACTTAAC TTGGGC GAATAGTAGCGCGTGACGCA TTATATAAGAATGAG  60 117
CXD84_RS02330  458724 ..  458734 -  -3.2  -3.59979   GTTGGGCATGGCAAA                 CTCC TGA GGAA                 GGCAAGAATAGGATT  49 39
CXD84_RS02325 NONE
        pruA NONE
CXD84_RS02315  454500 ..  454513 -  -5.9  -3.34947   CAACAAGGCCCACAA               CCGGC ATCA GCCAG                GCACGCATGCGGCGA  52 384
CXD84_RS02305  453637 ..  453671 - -22.3  -3.53012   CTGCGTTGCGCCAAA    GACAAAGGCCGCCCGG CATG CCGGGCGGCCTTTG-C     GGGCAGCGCGCCTAG 100 42
CXD84_RS02300  452562 ..  452572 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS02295  451540 ..  451579 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTTGTCCAGG  64 4
CXD84_RS02290  450315 ..  450328 -  -5.3  -2.83403   CGCGCGGCAGGAAAT               GAAGA AAGG TCTTC                TCGCCATGCCGCCGG  46 206
CXD84_RS02265  443710 ..  443740 - -12.5  -3.29144   CCACGTGCCGTACAA       GGGTACGTCGGCC GCGCT GGCCGACGTGGCC       GGGGGCGTCGTGCAA  70 423
CXD84_RS02240  439136 ..  439146 -  -6.8  -3.51825   GGACTCGAACGAGAA                 TGCG TTC CGCA                 TGGCGGCGTCGATGG  58 378
CXD84_RS02230  436234 ..  436246 -  -6.2  -3.60792   CCTCGAATGGTGAAA                CGCC GGACA GGCG                GGATCTGTGGAAAGT  56 89
CXD84_RS02225  435825 ..  435845 -  -2.5  -3.13906   GCTAACGGAAAACCA           CCCGCCGA CGCACC CCGG-GGG            AGACCCGCCCTTGAC  42 46
CXD84_RS02220  435256 ..  435281 - -18.3  -5.42862   ACAGGCCGAAAAAAA         GCCCCG-CGGCC TGC GGCCGGCGGGGC         GTGTACGGCGCCGGG 100 51
CXD84_RS02215  434406 ..  434434 - -10.3  -3.55444   TCTGGATGGGGGAAA       GCGGCCGGC-CGG GCTTG CCGTGCCGGC-GC       ATTGGTGTCACTCTA  67 89
CXD84_RS02200  430172 ..  430189 -  -3.3  -3.08464   CTACCACTGAGCTAA             CCACCCC GAAA GAGGCGA              AATTCTAGCACGAAA  44 73
CXD84_RS02195  430060 ..  430094 - -19.5  -3.54489   GGAAGCGGAAATGAA    GAAGGGCCGGT-GCTT TTGC AAGCGACCGGCCCTTC     TGGGATGCTGGTGGG 100 34
CXD84_RS02190  429546 ..  429572 - -11.5  -2.78384   CGTTGTTCGACGATA         GCCCAGGCCTG GCGCA CAGGCCCGGGG         ATGCGCACAGACAGC  62 101
CXD84_RS02185  428096 ..  428141 -  -7.4  -3.86822   GAAGCCTTCGAGAAA CTGGGCGCGCCGCC--CCTGCC CGAG GGCAGGTAGGCGGCTGGCGCCG GGCTAGAAGAAGCTC  66 28
CXD84_RS02160 NONE
CXD84_RS02155 NONE
CXD84_RS02145 NONE
CXD84_RS02140  419009 ..  419046 - -14.7  -3.15699   ACGCATCTATGAAGA   TGCCGTGGCCGACTTCG TACG CGACGCCGGCCGCGGCT    ATGCCGGCCGCCAGG  77 87
CXD84_RS02115  415437 ..  415464 -  -3.9  -2.78996   CATCCTGATCGAAAT        GGGCAGGCCCG TCTGCG CGCGCCGTCCC         GCGAACCGCCGCTGC  41 41
CXD84_RS02110  414358 ..  414396 -   -13  -3.52093   ATATTGGAACCATAA   TCCGCGGCACCCGGCCCA TAT TGCATCCGGCGCCGCGGA   TTGCGGGCGGGCCAT  77 53
CXD84_RS02105 NONE
CXD84_RS02100 NONE
CXD84_RS02095  410651 ..  410661 -  -5.4  -2.94924   CCTGGATGGAGAAAG                 CTCT ACC AGAG                 GCTCATTCCTTGTAC  47 28
CXD84_RS02090 NONE
CXD84_RS02085  407962 ..  407990 - -11.7  -3.81755   ACGCGTGAAACAGAA        GCAGGGTGTTCAC GAT GTGAACACCCAGG        GACGGGCGCCGGCTT  79 59
CXD84_RS02080 NONE
CXD84_RS02075 NONE
CXD84_RS02070  404676 ..  404692 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  60 494
CXD84_RS02055  401739 ..  401763 -  -9.2  -3.64822   ACCGGTGTAGCCAAA         GCGGGCCAGCG TCTG CGC-GGCCAGC          CGCGCGCGCGGGTCG  68 347
CXD84_RS02045 NONE
CXD84_RS02040 NONE
CXD84_RS02035  397207 ..  397263 -  -6.6  -3.14051   TTATTTCCAGGAACA CCCG--CATCCCACCGAAGGCACGAT ACGCACG ACCGCGCCGCCGGTCGAATGGTCGGG CACGCCCGGCGGGTA  50 237
CXD84_RS02015  393815 ..  393825 -  -3.2  -2.78816   TCATCGGCCATGACA                 CATC GCT GACG                 GGGTTTGGCGGCGGG  40 151
CXD84_RS02000 NONE
CXD84_RS01995 NONE
CXD84_RS01990 NONE
CXD84_RS01985  389593 ..  389605 -  -3.3   -3.6968   CGAGAACCCCAAGAA                GCTGA AGT TCCGC                GAACTGGAAGCCGCC  55 436
        argB NONE
CXD84_RS01970  387170 ..  387202 - -11.9  -3.09635   AGGTGGAGTAGGGAA      CCCGTCGTCAGCCGC GCA GCGGGCGACGACGCA      ACAGCAAATCACTGA  66 0
        slmA NONE
CXD84_RS01960 NONE
CXD84_RS01955 NONE
        gatC NONE
        gatA NONE
        gatB  374200 ..  374218 - -10.2  -2.62515   AATCGGTCGAGATCA             TCCGCGCC GCC GGCGCCGA             GCCCGCCGCGGTGCT  55 359
         xth  372539 ..  372550 -  -7.2  -4.25104   TTCGTCGGACGAAAA                GCCG GAAT CGGC                 CGCAAAACCAGTGCT  72 313
CXD84_RS01900  370755 ..  370784 -   -18  -3.93262   CCCAACAAATGGAAA       TGCCGCTGACCA TCGTGC TGGTCAGCGGCA        TGATCACCGGGTGCG 100 313
CXD84_RS01885  368095 ..  368138 - -11.6  -3.15544   GGTCAGGCGCATCAA GACCGGCG-CCGGCGCGCA TGCGTTC CGCGCGCAGGGCGACGGCC GCCATCTGTTCGTCA  64 285
CXD84_RS01845 NONE
CXD84_RS01840  359015 ..  359025 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CXD84_RS01835  357794 ..  357838 -    -4  -2.78463   AGTGGCGCGAGCAGA CGCTGTCCGAAGCGGGCGAC CTGGT GCTGGCCGCGCCGGATACCG GCCTGGACGCCAAAG  40 198
CXD84_RS01810  355500 ..  355534 -    -4   -4.9792   CATTTTAGATAAAAA     CCGCGCGCATGCAACC GGT GCCTGCCGGCGCGCCA     GCGCCGACGGCCCGC  79 115
CXD84_RS01805 NONE
CXD84_RS01800  353880 ..  353893 -  -2.3  -2.64616   TTCCCATCGAGAGCA               GGCAC GAGC GTGCT                TGTGCTGTCGATGAC  38 120
CXD84_RS01795 NONE
CXD84_RS01790 NONE
CXD84_RS01785  349208 ..  349260 - -16.2  -3.05844   TCGGCCAGCGGAATA TGCACCGCGCCGCTGGCGGCGG CGAGAATGC CCACCGCCAGCAGGGCAGCGCC CAGCGCCAGCAGCAG  79 60
CXD84_RS01780 NONE
CXD84_RS01775  347490 ..  347515 - -11.9  -3.57144   TGCGCCACCTCGAAA         CCGGCGC-CTGA GGT TCAGCGCGCCAG         CACCAGCAGGCGGCC  72 14
CXD84_RS01765 NONE
        alkB  345474 ..  345490 -  -9.3  -2.52464   TTGCGGCCGAATTCA              GGCGCCG GCG CGGCGCA              GCGTGAAGTTGATGC  54 6
CXD84_RS01755  344859 ..  344869 -  -8.2  -3.53012   TGCCGGCGTTGCAAA                 CGGC TCA GCCG                 GCCTCGCGCAACAGC  62 19
CXD84_RS01750  343288 ..  343305 - -12.7  -3.06915   AGGGACGCTACGCAA             GCCGGCT GGTC AGCCGGC              CCGAGCATCGCGACG  66 346
CXD84_RS01725 NONE
CXD84_RS01720  339153 ..  339167 -  -8.5  -2.56596   GTCGGGAGCAATCTA               CGCGG GTCGG CCGCG               CGCTGTCTGTTTACT  52 64
CXD84_RS01715 NONE
CXD84_RS01710 NONE
CXD84_RS01705 NONE
CXD84_RS01700 NONE
CXD84_RS01695  334224 ..  334258 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS01685 NONE
        lptG NONE
CXD84_RS01675  330024 ..  330036 -  -4.7  -3.01712   CGTTCGTGGCCAAGA                GCGAG ATC CGCGC                CTGGCCGGTCATCGG  46 510
CXD84_RS01640 NONE
CXD84_RS01635 NONE
CXD84_RS01630  323261 ..  323299 - -10.2  -5.80951   ATCCAAAACAAAAAA   GTGAAGCCCATCGGATCG TAA CAATCCGATGGGCCGGGC   CCTGCCCGTCGCGGC 100 45
CXD84_RS01625  320951 ..  320963 -  -2.7  -2.80074   GTTTTTACAAGAGGA                TCCAT GAC ATGAA                AATTCTGCAACCGCC  39 516
CXD84_RS01560 NONE
CXD84_RS01555  307130 ..  307146 -  -9.3   -2.7185   ATCATGGTGGAATTA              TGCGCCG GGC CGGCGCC              GGCGTGGCCGGCCTG  55 41
CXD84_RS01550  305921 ..  305955 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD84_RS01540  304767 ..  304782 - -11.8   -5.4505   TTGGCCAACAAAAAA              GCCGCC CGGA GGCGGC               TGGAAGGTCGGCTTC 100 42
CXD84_RS01535 NONE
CXD84_RS01530  302820 ..  302843 -  -3.1  -3.51934   CCTGGCTGAGAAACA          TCG-AGCCGA ACTTG CCGGCCCCGA          TCAACGCCACCCGCA  49 219
CXD84_RS01515 NONE
CXD84_RS01500  295234 ..  295264 -  -8.8  -2.66316   GCGGCGAGCAGATCA       CCGCCGTGGCGCTG GAC CTGGGCTACGGCAG       CCCGGGCGCCTTCAC  51 151
CXD84_RS01490 NONE
CXD84_RS01485 NONE
CXD84_RS01480 NONE
CXD84_RS01475  290082 ..  290092 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS01470  288727 ..  288755 -    -6  -3.08679   CCGCGTGATGGAAGA       CATCGTGCGCACGG GCG CCGTGCGG-CG-TG       GCTGGTTCGGCATCG  48 348
CXD84_RS01460  287000 ..  287026 -  -7.9  -3.23853   CCGCCGCAAGGAAGA        GGCCGCGCCGGA AGCG CCCGCCGC-GCC         GCCGGAAGATGTCAC  53 114
        petA  285414 ..  285457 - -12.4  -2.66787   CGAAGATCCACACCA GCTCGCGCGGCTTGCGGTACG AGC CGTAGAACAGGCCGCGC-AGC ATGTGCAGGTAGACC  64 419
CXD84_RS01440  283446 ..  283461 -  -5.4  -2.93367   GAAGAAGCCCAGATA              GATCAG CGTG CCGATC               TGCGAGGTCAGGTTG  46 50
CXD84_RS01435  282353 ..  282384 - -18.8  -3.94846   GTATGAAAAGCGAAA      GGCCAGCGCC-GCCA AAT TAGCAGGCGCTGGCC      CCGATTGCCAGGCGG 100 123
CXD84_RS01430 NONE
CXD84_RS01425  281181 ..  281205 - -17.2  -3.16191   CTACACCGGCATGAA          CGCAAGCGGC GCATG GCCGCTTGCG          AGGGACTGCATTGTA  84 73
CXD84_RS01420  281061 ..  281081 - -13.3  -5.07011   TACATAAACGAAAAA            GCCGTCTCC AGA GGAAACGGC            CTAGATCGTTGATTT 100 44
CXD84_RS01405 NONE
CXD84_RS01400  278811 ..  278850 -  -8.6  -3.02144   TCAGCGCCGCCAACA  CCATGCGCCTGG-ACAACA TGG TGCTGTACCAGACGCCCAG  CCTGGATGGTTTCAA  55 372
CXD84_RS01320 NONE
CXD84_RS01315  263652 ..  263702 - -13.4  -2.53876   TCCCAGCGGAATCCA GGGCATCGTGATCGG-GCCGCACGGC CTG GCCG-GCGGCGCCGATC-CG-CGCCG CGAAGGCCTGGCGCT  67 58
CXD84_RS01305  260931 ..  260946 - -11.8  -3.57144   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC  72 46
CXD84_RS01295  258774 ..  258796 - -12.7  -3.24747   GGGCGACATGACCAA          CGCGCGCCGC TAGA GCGGCGC-CG           GGCGCGTCAGTTGGG  71 32
CXD84_RS01285 NONE
CXD84_RS01280  255252 ..  255289 -    -9  -3.35679   CGCGGGCAGTGAGAA   GCGGGCGCCCGTCCCC GTTGGG GAGGAGCGACACCCGC    GGCAAGGGTGCCTGT  63 127
        mutL NONE
        miaA  251662 ..  251691 - -23.7  -2.78816   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 30
CXD84_RS01255 NONE
CXD84_RS01250 NONE
        pcnB NONE
CXD84_RS01240  246871 ..  246884 -  -4.5  -3.38326   CAGAAGCTGAACGAA               GCGTCG GCG CG-CGC               GCTGAACACGCCGGC  49 189
CXD84_RS01220  241298 ..  241329 - -15.9  -3.76413   TTGCAAAATGGGAAA      GGCATCCGGTGCG TGCGAG CGCACCGGACACC       ATTGGACGGCCTGCG  90 42
CXD84_RS01215  240317 ..  240327 -  -2.4  -3.29144   CGACCTGGCGCACAA                 GGAC CTG GGCC                 TGGCGCTCGAACTGG  44 257
CXD84_RS01195  237335 ..  237345 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS01190  236214 ..  236228 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
        thiC  230281 ..  230295 -  -8.5  -3.02263   ACACCTCGGTCAAGA               CCGCC TACAC GGCGG               CCTGACCCGCATGGC  55 72
CXD84_RS01145 NONE
CXD84_RS01140  225044 ..  225093 -  -9.8  -2.82015   GCCATAGGCAGCATA TCGGCGACGGCGGCGCC--GCGGA TTTT CCCGCTTGGCGCGGCCGACGCGGC GCCGGTAGGCATCGC  56 396
CXD84_RS01130  223482 ..  223494 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTACCCGGACTGCCG  50 368
CXD84_RS01120  219825 ..  219853 -  -2.3  -4.92756   ATGATCAAAAACAAA        TCATCCTGGGACG CAG CGCCTCAAAATGT        TGGGAGGCTTCCGGG  76 237
CXD84_RS01115  216561 ..  216590 - -23.7  -2.78816   TCATGGCGCATGACA       GAGCGCCTGTCCC CGTG GGGACAGGCGCTC        TTGCCGCTGGTGTCG 100 111
CXD84_RS01110 NONE
CXD84_RS01105  213813 ..  213826 -  -3.7  -3.33696   GGGCTCCGTAAGGAA               GGCGC GGCG GCGTC                AGTGGGTCAGGTAAC  47 24
CXD84_RS01100  212999 ..  213032 - -12.4  -2.82519   CGAGCACATCAACCA    GGCGCTGCGGCGCCGC TGAG GCGGCGC-GC-GCGCG     ATGCGCGAGCAGGCG  66 61
CXD84_RS01090 NONE
CXD84_RS01085  210674 ..  210694 - -19.7  -4.11216   CTTCGATCGGTAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGGCGTTCAG 100 37
        catC NONE
CXD84_RS01075 NONE
        pcaD NONE
CXD84_RS01065  207884 ..  207896 -  -4.7  -3.73068   GGCCGAATGCAACAA                GTCGG CAA CCGGC                AAGACCGGCGACGAG  58 310
CXD84_RS01035  202812 ..  202822 -  -8.2  -3.28712   GGCGCGGGTGGACAA                 CGCC TAT GGCG                 ACCGCAACCTGGTGT  59 217
CXD84_RS00985 NONE
CXD84_RS00980 NONE
CXD84_RS00975  189283 ..  189295 -  -4.8  -3.41051   GCAGTTCGACGAGAA                GTCG TTCGT CGAC                TTCAAGGGCGATGTC  52 372
CXD84_RS00950  181954 ..  181983 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGT GCCACGGCGGCGCT       GCAGGGGCCGGCGGG  91 50
CXD84_RS00945  179645 ..  179671 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GTG GCGGGCCGGCGG         CGGCGCGCTCAGCGC 100 34
         bfr  174605 ..  174626 - -17.3  -3.75629   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG  91 63
CXD84_RS00885 NONE
CXD84_RS00880  167973 ..  168028 -  -6.7  -3.15544   CGCTATCCGCACGAA TTCTCCGGCGGCCAGCGCCAGCGC-AT CTGC ATCGCGCGCGCGCTGGCCACCCG-GCC GCGCTTCCTGATCTG  52 330
CXD84_RS00870  165580 ..  165637 -  -2.7  -4.11484   CTGAACTCTTCAAAA CCATGGAAGCGGTGCGCTGGAATAT-GG CGT CCGATATCCCATGGGACGACTTCGACGG CAGCAAGCTGTCGGA  59 327
        phoB NONE
        phoR NONE
CXD84_RS00830 NONE
CXD84_RS00825  156668 ..  156695 -  -2.7  -2.66316   CGGCCGACGATAGCA       GGGCG--GGACTG ACCT CAGTCTGTCGCCC        GGATTACGCGTTTGT  39 12
CXD84_RS00820  156033 ..  156045 -  -7.7  -3.78934   TTGCCTGTACAACAA                GGGTT GAA AACCC                CCCCCCATTGTGGAC  66 95
CXD84_RS00815  154540 ..  154555 -  -3.2  -3.73775   TCGAGCTCGACGAAA              TCGACG CCAT CGCCAA               CCTGGTGCGCCACGG  55 282
CXD84_RS00805 NONE
        pxpB NONE
CXD84_RS00795  151130 ..  151152 -    -9  -3.01712   TCCGGTCGGCGAAGA           CTTCCTGCGC CGC GCGCAGGCCG           ATGGCGCGGGCAGCG  57 495
CXD84_RS00780  148888 ..  148900 -  -5.5  -3.01712   GCGGCGCCGCCAATA                CCGCA TCC TGCGA                TGATGACTCGCATAG  47 108
CXD84_RS00770 NONE
CXD84_RS00765 NONE
CXD84_RS00760  144574 ..  144615 -  -9.2  -3.72027   AGCGCCTACGAACAA TGGGCGGGCGACGC-CGGC GACGA GCCGGGCGACGACCGCCTG CGCGTCGCGTAGGCC  68 125
        ilvA  137210 ..  137220 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 380
CXD84_RS00730 NONE
CXD84_RS00720  133782 ..  133822 -  -8.8  -3.05715   AATGCCGTTACCGAA CGCCAAGTCCGCGCCTGCG TGGA CGCGGGCGCGG-CTACGCT  GGGCGATCTCCAGTT  55 264
CXD84_RS00705  131504 ..  131523 - -16.4  -3.85165   CAGCGCAAATGTAAA            CGGCGCGC CAGG GCGCGCCG             TCAGGCCGGTCCGGG  91 55
        leuA  129068 ..  129096 - -16.7   -3.1372   GACCGCCGAGCAATA        CCTGGCCCACCTG GCG CAGGCGGGGCAGG        CGCGCGCGAAAGTGG  80 355
CXD84_RS00685 NONE
CXD84_RS00680  125743 ..  125787 - -17.8  -3.19653   CCAGAAGGCCAGGAA CAGCGCCGCGGCCGGC-GCAG CGAA CAACAGCCATCCGCGGCGCTG CATATCAATTCACCT  86 30
CXD84_RS00670 NONE
CXD84_RS00665  123175 ..  123185 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD84_RS00660  122097 ..  122125 -  -2.9  -3.30701   TTCCAGGAAATTCAA        TGGGCCGCCAGCA CCA CGCTGACGGACTG        GCCGGTCTGATAGGT  46 71
CXD84_RS00655  121221 ..  121242 - -10.8  -2.84325   GCGGTGCAAACATGA           CGCCGCCA TGTCAG CGGCGGCG            CTTGTTTCACTCGTC  61 32
CXD84_RS00650  120111 ..  120125 - -12.8  -3.48276   CGGTGGTTCACAGAA               CCGCCG CGT CGGCGG               CGAAGAAATGCTGTC  73 3
CXD84_RS00645 NONE
CXD84_RS00640 NONE
CXD84_RS00635  116911 ..  116929 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 181
CXD84_RS00615 NONE
CXD84_RS00610  112261 ..  112275 -    -7  -2.90714   TTAAAGCGTTACAGA               CTGCGG ATG CCGCGG               GGAAGTTCCATGGCG  50 43
CXD84_RS00605  111548 ..  111567 - -11.4  -4.08144   CCCATCAACGACAAA            GCCTCCGC ATGG ACGGAGGC             TTTGTGGCGTCGGGG  82 60
CXD84_RS00590 NONE
        rfbB NONE
        rfbD NONE
        rfbC  105870 ..  105905 - -16.1  -3.14878   GGCGTCAACTGAAGA    CGCGCGGGCCGCTAC GCATAG GTATCGGCCCGCGCC     AGCGCCACGCCCTGG  81 1
CXD84_RS00520 NONE
CXD84_RS00515 NONE
CXD84_RS00510   95126 ..   95159 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATT GCGGCGGGGGCGGCG      CTGCGTGCGCCCGAC  52 204
CXD84_RS00495 NONE
CXD84_RS00490 NONE
CXD84_RS00485 NONE
CXD84_RS00480 NONE
CXD84_RS00475   87784 ..   87799 -  -7.5  -2.62515   AATTCTCGCAGATTA              GCGCG AGGCTG CGCGC               CGTGGCGTGACAGAT  50 7
CXD84_RS00470 NONE
CXD84_RS00465   85836 ..   85859 -  -9.4  -3.53012   GCGTTGGTGCGCAAA          GGCGCGACAC TGCC GGGGCGCGCC           ATTGAGTGCGAGTCA  64 107
CXD84_RS00460 NONE
CXD84_RS00455   83803 ..   83824 -  -7.9  -4.62302   GAAGAGCCGGAAAAA           CCCAGTGCG ACGG CGCACAAGG            CCAGTGGCGTGGATA  81 73
CXD84_RS00445   80530 ..   80544 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 131
CXD84_RS00435   78375 ..   78401 -  -8.7  -4.07568   CTCGCTGCTGGAAAA         GCTGCCCGC GCAGCTCCA GCAGGCAGC         CGGCCAGCTGCAGGG  72 308
CXD84_RS00425 NONE
CXD84_RS00420 NONE
        ampD NONE
CXD84_RS00410   74431 ..   74462 - -10.1  -3.25823   GGTGCTGGAGATCAA      CCCGGACCACGCGC TGGTC GCGCG-GATCCGCG      ATGCCAGCGATGCGG  63 318
CXD84_RS00400   72248 ..   72270 - -12.6  -2.82742   ACGCTTTTATAACGA           CCGGCGCCCG CAT CAGGCGCTGG           GCATGAAGACTCCGG  66 195
CXD84_RS00375   68040 ..   68050 -  -8.2  -2.54655   AAAAGGCCCAACCCA                 GGGG TAC CCCC                 AAATTGATGATCCAT  52 507
CXD84_RS00365 NONE
CXD84_RS00360   65549 ..   65562 -  -5.3   -3.5323   AACTTCAAACAAAAC               TATCG CACT CGATA                TCAAGCGCATCGATC  54 1
CXD84_RS00355 NONE
CXD84_RS00350   64333 ..   64359 -  -4.3  -2.78384   GCGCGGCCCATGATA        TCCGTGCCC-CC ACCG GGTGGGAACGGT         ACGACCAGTGTAATA  43 189
CXD84_RS00345   63110 ..   63132 -  -8.4  -4.09685   GGTGATGGCGTAAAA           GGGCATAGCG ATC CGCTATATCC           AGCCTGGCAAGCCAA  72 385
CXD84_RS00335   62036 ..   62047 -    -3  -5.30348   ACTTAACAATAAAAA                TTCA AATA TGAA                 TGTTTAATTTAGTTA  89 105
CXD84_RS00330 NONE
CXD84_RS00325   59949 ..   59979 -  -5.3  -3.73068   GGTCGAAGCCAACAA       CCCCACCACCAGC ATCCA GCTGGTCGTGGCC       GGCATAGGGCTGGGT  57 344
CXD84_RS00315 NONE
CXD84_RS00310 NONE
CXD84_RS00305 NONE
CXD84_RS00300 NONE
CXD84_RS00295 NONE
CXD84_RS00290   54428 ..   54450 -  -4.8  -3.76482   CGACACCAGCAAGAA           CCTGGTCG AGGAAGG CGACAAGG           GCAAGCGCTACGCGC  58 247
CXD84_RS00245   46286 ..   46321 -  -2.4  -4.16842   TTCATGCTCAAGAAA    CGCGTGCGGATCCTG TGGCAGG CCGGCTGCGC-CGCG    CTGCTGCTGGCCGCC  61 474
CXD84_RS00225   44315 ..   44355 - -20.6  -3.53012   GTCTTGGCCGTCAAA CCG-CAGTGTGCCTGTCCC AGCG GGGACAGGCACACTGGCCG  CAGTTGGGACAGGCA 100 66
CXD84_RS00185   36625 ..   36643 - -13.1  -2.84298   GACAGTTCACAACTA             GCGCGGC GCCTG GCCGCGC             GGCAGCCAGTGCCAG  69 4
CXD84_RS00155   30988 ..   31001 -  -3.7  -2.70932   TCTCGCCGCGAATCA               TCGCC TGGC GGCGG                ATCCGGCCAGCATGG  41 94
CXD84_RS00150 NONE
CXD84_RS00145 NONE
CXD84_RS00140 NONE
CXD84_RS00135   28287 ..   28297 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD84_RS00130   26859 ..   26875 -  -5.8  -3.53012   TGCGCTGCCTGCAAA             GC-GGCG CGGA CGCCTGC              GTGCCCCTGCCGGCC  55 433
CXD84_RS00115   24044 ..   24068 -  -7.7  -2.97021   TCGGCAAAGATGATA          TCCAGGCCCAC TGC GCGGGCCTCGC          CCAGCTTGTCCAGCA  53 310
CXD84_RS00100   20076 ..   20099 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 53
