LK412_RS00025 NONE
LK412_RS00035   10022 ..   10062 +  -8.8  -3.05715   AACTGGAGATCGCCC AGCGTAG-CCGCGCCCGCG TCCA CGCAGGCGCGGACTTGGCG  TTCGGTAACGGCATT  55 264
LK412_RS00050   12321 ..   12340 + -16.4  -3.85165   CCCGGACCGGCCTGA            CGGCGCGC CCTG GCGCGCCG             TTTACATTTGCGCTG  91 55
        leuA   14748 ..   14776 + -16.7   -3.1372   CCACTTTCGCGCGCG        CCTGCCCCGCCTG CGC CAGGTGGGCCAGG        TATTGCTCGGCGGTC  80 355
LK412_RS00070 NONE
LK412_RS00075   18057 ..   18101 + -17.8  -3.19653   AGGTGAATTGATATG CAGCGCCGCGGATGGCTGTTG TTCG CTGC-GCCGGCCGCGGCGCTG TTCCTGGCCTTCTGG  86 30
LK412_RS00085 NONE
LK412_RS00090   20659 ..   20669 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS00095   21719 ..   21747 +  -2.9  -3.30701   ACCTATCAGACCGGC        CAGTCCGTCAGCG TGG TGCTGGCGGCCCA        TTGAATTTCCTGGAA  46 71
LK412_RS00100   22602 ..   22623 + -10.8  -2.84325   GACGAGTGAAACAAG           CGCCGCCG CTGACA TGGCGGCG            TCATGTTTGCACCGC  61 32
LK412_RS00105   23719 ..   23733 + -12.8  -3.48276   GACAGCATTTCTTCG               CCGCCG ACG CGGCGG               TTCTGTGAACCACCG  73 3
LK412_RS00110 NONE
LK412_RS00115 NONE
LK412_RS00120   26916 ..   26934 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 182
        argS NONE
LK412_RS00145   31570 ..   31584 +    -7  -2.90714   CGCCATGGAACTTCC               CCGCGG CAT CCGCAG               TCTGTAACGCTTTAA  50 43
LK412_RS00150   32278 ..   32297 + -11.4  -4.08144   CCCCGACGCCACAAA            GCCTCCGT CCAT GCGGAGGC             TTTGTCGTTGATGGG  82 60
LK412_RS00165 NONE
        rfbB NONE
        rfbD NONE
        rfbC   37940 ..   37975 + -16.1  -3.14878   CCAGGGCGTGGCGCT    GGCGCGGGCCGATAC CTATGC GTAGCGGCCCGCGCG     TCTTCAGTTGACGCC  81 1
LK412_RS00235 NONE
LK412_RS00240 NONE
LK412_RS00245   48686 ..   48719 +  -9.3  -2.75481   GTCGGGCGCACGCAG     CGCCGCCCCCGCCGC AATG GCGTCCCGGGCGGCA      TCCTTGAAATTGAAC  52 204
        wlbA NONE
        wlbB NONE
        wlbC NONE
        wlbD NONE
        wlbE   56046 ..   56061 +  -7.5  -2.62515   ATCTGTCACGCCACG              GCGCG CAGCCT CGCGC               TAATCTGCGAGAATT  50 7
        wlbF NONE
        wlbG   57986 ..   58009 +  -9.4  -3.53012   TGACTCGCACTCAAT          GGCGCGCCCC GGCA GTGTCGCGCC           TTTGCGCACCAACGC  64 107
        wlbH NONE
        wlbI   60021 ..   60042 +  -7.9  -4.62302   TATCCACGCCACTGG           CCTTGTGCG CCGT CGCACTGGG            TTTTTCCGGCTCTTC  81 73
LK412_RS00305 NONE
LK412_RS00310 NONE
        wlbL   63301 ..   63315 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 131
LK412_RS00325   65444 ..   65470 +  -8.7  -4.07568   CCCTGCAGCTGGCCG         GCTGCCTGC TGGAGCTGC GCGGGCAGC         TTTTCCAGCAGCGAG  72 308
        ccsA NONE
LK412_RS00340 NONE
        ampD NONE
LK412_RS00350   69383 ..   69414 + -10.1  -3.25823   CCGCATCGCTGGCAT      CGCGGATC-CGCGC GACCA GCGCGTGGTCCGGG      TTGATCTCCAGCACC  63 318
LK412_RS00360   71575 ..   71597 + -12.6  -2.82742   CCGGAGTCTTCATGC           CCAGCGCCTG ATG CGGGCGCCGG           TCGTTATAAAAGCGT  66 195
LK412_RS00380   74091 ..   74104 +  -4.5   -2.9627   CGTGATCTTGGCTCA               GGCAT TCAT GTGCC                TATCTAATAAATTAA  45 5
LK412_RS00385   75440 ..   75453 +  -3.1  -3.56541   AGAATAGAGAACTCG               GTGAT GATA GTCAC                TTATCTCATACTCAT  49 152
LK412_RS00390 NONE
LK412_RS00395 NONE
LK412_RS00400   78283 ..   78296 +  -5.3   -3.5323   GATCGATGCGCTTGA               TATCG AGTG CGATA                GTTTTGTTTGAAGTT  54 1
LK412_RS00405 NONE
LK412_RS00410 NONE
LK412_RS00415   80713 ..   80735 +  -8.4  -4.09685   TTGGCTTGCCAGGCT           GGATATAGCG GAT CGCTATGCCC           TTTTACGCCATCACC  72 385
LK412_RS00425   81798 ..   81809 +    -3  -5.30348   TAACTAAATTAAACA                TTCA TATT TGAA                 TTTTTATTGTTAAGT  89 105
LK412_RS00430 NONE
LK412_RS00435   83866 ..   83896 +  -5.3  -3.73068   ACCCAGCCCTATGCC       GGCCACGACCAGC TGGAT GCTGGTGGTGGGG       TTGTTGGCTTCGACC  58 344
LK412_RS00445 NONE
LK412_RS00450 NONE
LK412_RS00455 NONE
LK412_RS00460 NONE
LK412_RS00465 NONE
LK412_RS00470   89395 ..   89417 +  -4.8  -3.76482   GCGCGTAGCGCTTGC           CCTTGTCG CCTTCCT CGACCAGG           TTCTTGCTGGTGTCG  58 247
LK412_RS00510   97524 ..   97559 +  -2.4  -4.16842   GGCGGCCAGCAGCAG    CGCG-GCGCAGCCGG CCTGCCA CAGGATCCGCACGCG    TTTCTTGAGCATGAA  61 474
LK412_RS00530   99490 ..   99530 + -20.6  -3.53012   TGCCTGTCCCAACTG CGGCCAGTGTGCCTGTCCC CGCT GGGACAGGCACACTG-CGG  TTTGACGGCCAAGAC 100 66
LK412_RS00570  107202 ..  107220 + -13.1  -2.84298   CTGGCACTGGCTGCC             GCGCGGC CAGGC GCCGCGC             TAGTTGTGAACTGTC  69 4
LK412_RS00595  112844 ..  112857 +  -3.7  -2.70932   CCATGCTGGCCGGAT               CCGCC GCCA GGCGA                TGATTCGCGGCGAGA  41 94
LK412_RS00600 NONE
LK412_RS00605 NONE
LK412_RS00610  115250 ..  115263 +  -3.7  -3.94877   CGTCCAACGTCATGG               GGCCG TATG CGTCC                TTGTTGTTGGCCGAT  59 105
LK412_RS00620  116970 ..  116986 +  -5.8  -3.53012   GGCCGGCAGGGGCAC             GCAGGCG TCCG CGCC-GC              TTTGCAGGCAGCGCA  55 433
LK412_RS00635  119777 ..  119801 +  -7.7  -2.97021   TGCTGGACAAGCTGG          GCGAGGCCCGC GCA GTGGGCCTGGA          TATCATCTTTGCCGA  53 310
LK412_RS00650  123746 ..  123769 + -16.8  -5.50499   CCGCGTCAAGCAAAA          GGCCGCTGAT ATGC ATCAGCGGCC           TTTTTTTGGCTGTCG 100 53
LK412_RS00755  147375 ..  147396 + -15.9  -4.65895   TGCGCCCAAGAAAAA           TGCCGCGGT GCGA ACCGCGGCA            TTTTTCAATCGGCCG 100 59
LK412_RS00785  154844 ..  154858 +  -5.7  -4.15788   GCCCTGGAACGCCGC               GTCGA GCAGA TCGAC               TTTGTTGAAGACGTT  69 303
LK412_RS00795 NONE
LK412_RS00800 NONE
LK412_RS00805 NONE
LK412_RS00810 NONE
LK412_RS00815  161519 ..  161531 + -10.5  -2.78384   GCGCAGCAGGCCTGA                GCGCG CCG CGCGC                TGTGCTAAAAGAAAC  57 26
LK412_RS00820  162880 ..  162900 +    -9  -3.12999   CGTTTTCATAATGGA            TCGCTCCT GAACA AGGAGCGG            TTCCATGTCCCATGC  59 130
LK412_RS00825  163811 ..  163821 +  -8.2  -2.57344   CGCACCACGATCGAA                 GGCG ACG CGCC                 GTTCTGACGCGCGTC  52 8
LK412_RS00830  164916 ..  164929 +  -2.4  -2.86676   GCGCAGGGAAGCTGA               GATG GGCGCG CATC                GTTTCGATTCCTCGG  40 26
LK412_RS00835 NONE
LK412_RS00840  166619 ..  166648 + -22.9  -3.48593   GCGCTGAATGCCGCC       GGCGGCCG-GCCCG TTG CGGGCGCGGCCGCC       TTGTGTCGCGGCGTC 100 34
LK412_RS00850  169402 ..  169434 + -10.6  -4.17762   GTCGCCTTCTTCGCA     TGCTGCGCGCCGATG ATGC CATTGGCGC-CAGCC      TTGTTTTCCACGATC  78 235
LK412_RS00875  174123 ..  174135 +  -9.1  -3.01791   TTCATCCGGACCCGG                TCGCC GCG GGCGA                TGTTCAGGACGCCGT  55 446
LK412_RS00920  183024 ..  183054 +  -5.2  -2.52896   TGCAGCAGGATGCCG       TCGGGGCCGTGCAG CAC CAGCATGGCCGTGC       TGCGTTCGGGGATGG  42 379
LK412_RS00935  187654 ..  187673 +  -6.3  -3.57144   CGTGTCGAAGCGCTC            CACGCGC GGGGCG GCGCGGG             TTTCGGCCTGGACCG  57 161
LK412_RS00955  191466 ..  191483 +  -2.5     -2.97   GGCCGGCGCGTCCGC             GCCGGCC GAAC GTCCGAC              TCTGTAGATTGATTT  41 112
LK412_RS00960 NONE
LK412_RS00965 NONE
LK412_RS00970  194594 ..  194628 +  -2.7  -3.53811   TGCACTGAGGCGGCG    GGCCGG-GGCGGCG GGAAACGG CGCTGGCGCCGGGC     TTTCCGGCGGATCGC  49 33
LK412_RS00975  195732 ..  195776 +  -7.6  -2.65751   CAGCCTGAACTGATG CCGGAAGGCCGGCCGGGCGCC CGCG GGC-CCCGGCCGTCGTACCCA ATGTTGTATTCCTGG  50 28
LK412_RS00980  196529 ..  196542 +  -8.1  -3.14132   GCTCGGACAGCGGGA               TGCCG CTGT CGGCA                TTCATGCACGACAGC  53 358
LK412_RS00995  199488 ..  199515 +  -4.8  -2.71712   ACCCACGGGCCCGTG        CGCGGCGCATATG GCA CATAA-CGCCTCG        ATTTCCGGCGACGAC  43 42
LK412_RS01000 NONE
        panC  201292 ..  201307 +  -7.6  -2.57132   CGGCCGCGGCAGATC              CTGTCA AATT TGACAG               CTTCTCGGCGCAGGC  50 45
LK412_RS01010  201940 ..  201990 +   -11  -2.50935   TGGCGGTCATGACCA GCTCGGCGCGCATGTTGCCGCT GCCGTCG AGCAGCAGCACGCGGGGCGGGC GTTCCTGGGTGGCGT  58 248
LK412_RS01020 NONE
        coaE NONE
        zapD  205182 ..  205196 +  -5.6  -3.55071   CTATTTCAGCAGCGC               CCGGCA AAC TGCCAG               TTTGGGCCGGTCTGG  54 137
LK412_RS01035  206486 ..  206515 +  -7.2  -3.21099   CAATACCGGGGCGCC       CAGGCG-GACG CCGTGAGCC CGTCGCGCCTG       TTCATCCTGCGGCCG  52 10
LK412_RS01040  209557 ..  209579 +  -4.8  -2.53164   CGCGGCCGCGCGGCA           GGCGCC ATGATTCTGTC GGCGCC           GTTCATCGTCCGTCC  42 16
LK412_RS01045 NONE
LK412_RS01050  214326 ..  214360 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS01080  220739 ..  220768 +  -9.9  -3.16191   AAGATCATGCCGATG       CGGCG-GCCGCGCA CCT TGCGCTGCTCGGCG       TTGCTCAAGGTGTCG  62 140
LK412_RS01125  230126 ..  230147 + -15.9  -3.91144   GGCAGGCAGCAAAAA           GCCCGGTTC GCAT GAACCGGGC            TTTCTGGAATCTGGC  91 66
LK412_RS01210  243412 ..  243444 + -11.3  -3.22777   CGTAAGCCCACTCAC      GCAAGGCCGACTG GATGAAG CGTTCGGCCTTGC      TATTGGTCTGTGGGC  66 284
LK412_RS01305 NONE
LK412_RS01370 NONE
        fghA  272098 ..  272129 +  -4.3  -4.08706   CCGGTTTCACGTCGA      GCGGCTGGGGT AACAGGCCGG GCCCGGGCCGC       TTTATATACTGGGCG  62 13
LK412_RS01380  272888 ..  272907 +    -2  -3.53012   AGAAAAATATCCTGC            GTACTGGG AAAT TCCGGAAC             TTTGGCGCGGCGCAG  48 54
        rpoH  273920 ..  273939 + -13.6  -5.40474   CCCGCGCATGCAAGA            CAGACCGC TACG GCGGTCTG             TTTTTTTGGGGGCCT 100 55
LK412_RS01395  278219 ..  278234 +  -8.2  -3.66666   GCTTCTTCGCCGCAT              TCGCGC ACCA GCGCGG               TTTCCAGGTTTTCGC  63 427
        coxB  280163 ..  280195 + -13.4  -3.22858   GTCCAACCCAAGGAC     GTGGTGGAGGCGCGC TGAA GCGCGCC-CCGCTGC      TGTTCCTGTAGTTGG  73 8
        ctaD NONE
LK412_RS01415 NONE
LK412_RS01420 NONE
LK412_RS01425  283237 ..  283254 + -12.7  -3.33696   AGCCTTGACGACGAA             TGCCCCC GCAA GGGGGCA              TTCGTTCGCCGGCAG  71 57
LK412_RS01435 NONE
LK412_RS01440 NONE
LK412_RS01445 NONE
        cyoE NONE
LK412_RS01455  287640 ..  287666 +  -8.7  -2.87132   TGACTGCCAAGACGG         TATCTGTCCCC GCATG GGGGGCCGATA         TCTGTGGACGCCCAA  54 137
LK412_RS01465  288779 ..  288794 +  -2.4  -4.07885   ACTTGCGGCCAGCGG              CGTAGG TCAT CCGGCG               TTTTGGCAGGGGCTG  58 111
LK412_RS01470  289622 ..  289651 +  -2.6  -3.31322   GGCGGACAAGCCGTA       GCGCGCCGGCAC GCCCTG GAATCGTCGCGC        TTATCGAACCTTCGC  44 25
        glmU NONE
LK412_RS01480  292514 ..  292545 + -10.8  -3.04322   TACTTCTATAATGCC      CGCAGTG-CGGCGGA TGG TCCGCTGACGCCGCG      TATTGCGAGGTTGCA  62 87
LK412_RS01485 NONE
LK412_RS01490  295110 ..  295144 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS01510  298719 ..  298729 +  -8.2  -5.15634   GTTTTAATTATTTTC                 GCGC GCC GCGC                 TTTTTTCCTAGAGTG  95 203
LK412_RS01515  300139 ..  300170 +  -8.6  -2.56596   GCACCGCCACCTCCG      AATGAGGGCCGGCCG CCA CGG-CGGCCCTCGCA      TCCCTTCGTCACCCA  52 21
LK412_RS01520 NONE
LK412_RS01525 NONE
LK412_RS01530 NONE
LK412_RS01535 NONE
LK412_RS01540 NONE
LK412_RS01545  306991 ..  307005 + -11.4  -3.90112   GCTCGGTGTTGAGGT               CGCTGG TGG CCAGCG               TTTCCTTGGCCGCCA  77 391
LK412_RS01555 NONE
LK412_RS01560 NONE
LK412_RS01565  310781 ..  310792 +  -2.2  -3.18389   CCGGGCCTGCATGAA                CGAG GTGT TTCG                 TGATTTTCATCTTCC  42 95
        nudC  311630 ..  311675 + -14.5  -3.70902   TGGATGGCCTGGGTG GCCTGGGTGGCCAGCTGCGTG GCGA CGCGCTGCCGGAAACCCGGGC TTTCGGTCTCGCGCG  88 96
LK412_RS01580 NONE
LK412_RS01585 NONE
LK412_RS01590 NONE
LK412_RS01595  316932 ..  316945 +  -5.2  -3.10611   CCGACATCCGCGGCA               GGGC GTGCTG GCCC                GTTTCTTCGGGTAAA  49 382
LK412_RS01600 NONE
LK412_RS01605 NONE
LK412_RS01610 NONE
LK412_RS01615  320696 ..  320706 +  -8.2  -2.70932   ACGGGCGCTGAACCC                 GGGG CGC CCCC                 TCATTGCAGACAGAG  52 30
LK412_RS01620  321932 ..  321947 +    -6  -2.55606   CGGTATCTGTCCCCA              GGGGGG CAGG CACCCC               ATTCATCCTATATAG  46 163
LK412_RS01625  323097 ..  323113 + -10.8  -3.19602   CTGCAGGGCGATGCC              CGCCGC GTAGG GCGGCG              TCTTGGTGTAGCCCG  64 155
LK412_RS01635  325372 ..  325384 +  -3.3  -3.60475   ACCGACCCAACCAAA                GTGGG CGG TCCGC                TTTCGGATCACACTT  49 498
        trmB NONE
         pip NONE
        thiS NONE
        lysM  332343 ..  332365 + -14.9  -5.52384   TAGCCCCGATCGATT           CGGCCAGAC GCAAA GTCTGGCCG           TTTTTTTACTGCGCG 100 106
LK412_RS01690  333906 ..  333932 +  -7.8  -3.14132   CACGGGCGCCAGCGC         CAGGAACAGGCG CTG CGCCTGGCCCAG         TTGCTGCGCGCGCAC  53 398
LK412_RS01705  336685 ..  336704 + -16.4  -5.04733   GTCACCGTCCCGGGA            CGGCCGGC GCAA GCCGGCCG             TTTTGTTTATGCTTG 100 46
        ubiA  337753 ..  337767 +  -2.8  -3.01924   AGACGCGTTCCCAAC               TCCC CATTGGT GGGA               TCTTGCGGGCGAATC  42 101
LK412_RS01715  338154 ..  338186 + -18.5  -5.81412   CGCAGCCGTAAGTGC     CGGCGCCCG-CCCT GTACAG AGGGACGGGCGCCG      TTTTTTTTGCCTCCG 100 63
LK412_RS01720  339878 ..  339906 +  -7.4  -3.53012   GTCGGCGTCCGTGCC       GCGGATCGCCGCC AGCC GG-GCCGATTCGC        TTTCGAGCAGCGCGC  60 434
LK412_RS01730  342661 ..  342684 +   -21  -2.71364   GCGCTGACGCCGCCA          GGCGCCCGCC TGCC GGCGGGCGCC           TGCTTGCCGGGCTGC 100 34
LK412_RS01735  343346 ..  343362 + -15.1  -5.53288   GAACGCAGTCATGGT              CCGGCGC CGG GCGCCGG              TTTTTTTCGATTAAA 100 39
LK412_RS19780  343608 ..  343645 + -16.9  -2.65174   CTGACGGCTGAAGTT   GGCGGGAGCCAGTCCCC ATGC GGGGACAGGCTCCCGGG    TAGATTACTTATTTT  80 104
LK412_RS01785  355007 ..  355033 +  -9.2  -2.52516   GATACAGCTGCGCCC         CCGGCGCCTGGC CTA GCGTGGCGGCGG         CTTCGTCGTGCCGCG  51 513
        uvrA  365054 ..  365088 +  -2.8  -3.01712   CAAACGGCGCTAGAC    TAGGGCGGCACGGACG CGAAC CGCCCG--CCCCCCTA    TCTTGCCGCCAGGCC  42 28
LK412_RS01835  365924 ..  365947 +  -8.9  -3.53012   TTGGGGTAGGCCGCA          TGGGC-GAGG CAGCC CCTCAGCCCA          TTTCGAACAGCCGCC  62 183
LK412_RS01855  371666 ..  371691 +  -2.4  -3.70149   GATATCGACATCCAG         GCC-TGCGGCC CAATC GTCCGCCTGGC         TTTCGATACTGTCGA  53 331
LK412_RS01865 NONE
        lysA  373272 ..  373301 + -22.3  -3.53012   GCAAGGCCTGCCAAA       GACAATGCCCCGC ATCT GCGGGGCATTGTC        TTTGAAGGGCGGCGC 100 48
        yihA NONE
        hemB NONE
LK412_RS01915  383904 ..  383934 + -15.3  -3.13164   CGATGCATGAAAACA       TCGCGGCGGGCGC ATGGC GCGCCCACCGCGC       TTGACTGCTTACGGG  78 453
LK412_RS02015  394746 ..  394766 + -15.4  -4.72272   CCGGGCTCAGGCCAA            CCCCGCCG CGATC CGGCGGGG            TTTTTCATGGCCGGC 100 50
LK412_RS02020  395771 ..  395793 + -17.8  -3.72576   CGATGAACAAAAAAA           CGGCAAGAGC CAG GCTCTTGCCG           TTTCATGCCGGAGCG  93 125
LK412_RS02100  407435 ..  407456 + -15.1  -3.14132   GACAGTTCACAGCTA           GGCCGCGCC CGAA GGCGTGGCC            TTGGTGAAGAACAGA  76 25
       rfaE2  413008 ..  413039 +  -2.2  -4.68103   CCGATTGCACGGCCT     GGCGCCGC-GCGTC CTCGAA GTCGTGGCGG-GCC      TTTTGTTCCAGTTGG  70 357
        metH  423581 ..  423615 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS02185  427269 ..  427318 +  -7.9  -3.91084   TGCTGACCTGAACGG CCTGGC-GCGGCGTCATGCCTGCT CGGGC GGC-GGCGTGA-GCGGCAGCCGGG TTTCCTTCAGGCTGC  68 30
        ilvB  429770 ..  429809 +  -4.9  -3.76224   GCCTACACGCAGCGG CCGCCATCCACCTCCAGGC AGGC GCC-GGTGATGAA-GGCGG  TTTCGTCGCTGGCCA  58 94
LK412_RS02235  441347 ..  441400 +  -9.4  -3.25823   CAATTGGTAGGCCCA CAGGCCGTCGGC-GCGGCGCAGGGCG AAAT CGCCGACCGCGGCCGCC-ACGTCCTG TTGCTGTGGCCCCAG  61 390
LK412_RS02265  449874 ..  449901 +  -8.4  -3.25823   CCGGCCGGCGGTGGT        GACCGCCAGCGGC ACG GCC-TTGCCGGTC        TTGATGTGCGGCAGG  59 351
LK412_RS02275  451929 ..  451950 +  -4.3  -3.05596   CGCAAGTAAGGACGG           GGCCGGCAT GGCG ATGCAGGAC            TTCCGTCCCGGCGTC  45 32
LK412_RS02280  452184 ..  452208 + -17.1  -3.20991   GGAGCAAGGCTGACC          CGACGCCGGGC CGC GCCCGGCGTCA          TTCACTTCACTTCGA  84 28
LK412_RS02310  461018 ..  461062 +    -2  -3.17723   CGCGCCCGCTACGCC GC-CTGGAAACGCA-CGATGCC GTC GGCATCGGTGCGGCGCTTGAGC TTGCCTTCGAAATAC  42 56
LK412_RS02320  462584 ..  462609 + -13.5  -3.38522   AAACCCGACTCAACT         TTACGTTTACG TTTA CGTAAACGTAA          TATTTGCACTGCATC  75 91
LK412_RS02365  471513 ..  471534 + -11.5  -3.57144   CGCCCCCAAGCAAAA           GAGGCTGCC TCAC GGCAGCCCC            TTTCGGCATACGACG  72 95
        rpmH  477150 ..  477166 +  -2.1  -2.78384   CCGCCGCGCCAAGGG              CCGCAAG CGT CTGGCCG              TCTAATCCAGGCGGA  38 4
LK412_RS02390  477623 ..  477667 +  -2.8  -4.12902   AGATGCTCACTTCAC ACGGAT-AGCGCGATGATCAG GAGA CTGCTTATCGCCCCGATCCGG TTTTACCGGTACTTC  59 10
        yidD NONE
        yidC  479665 ..  479684 + -16.4  -5.55664   GAGCCAGCCACGAAA            CGGCGCCC TGCG GGGCGCCG             TTTTTTTCGTCCTGG 100 43
LK412_RS02415  482201 ..  482246 + -14.8  -2.78384   CAGAGCGACACGGCC CGGCCGTAGG--GCCGGCCTCAG GCC TTGCGGCCGGCGACCT-CGGCCG TGTCCTGCGGCGCCG  72 17
        bopC  484871 ..  484897 +  -7.1  -2.82516   AGCCGCTGCGCCGGA         ACGCCTCGGCC TCGTC GGCCGGCGCGC         TCTGGTCGTACAGGG  50 68
LK412_RS02435  487672 ..  487704 +  -3.3  -3.28791   GCGGCACGGACGATG     GCGCGGCGGG-TGG CGGCCT CAATCCCGCCGTAC      TTGTGGGCCGCACAT  47 393
LK412_RS02510  497309 ..  497324 +  -8.2  -3.09273   CCTGATCCTGGTGGG              GGCCGC TGTG GTGGCC               TATCTATTGGCGCGC  56 199
LK412_RS02515  498286 ..  498310 +   -15   -4.2828   CACCCTTGTGAAAAA         CCCCGCC-GGC GCAG GCCTGGCGGGG          TTTTCATGGGTGGAC  95 52
LK412_RS02540  501928 ..  501972 +  -7.1  -4.70659   GCTTGCTGGGGCGTT GGCGCA--CAGGCCGATCGCC TGCAC GGCAAGCGGCATGCGTGCGCC TTTTTACCTATCCGA  79 100
LK412_RS02545  502352 ..  502368 +  -3.5  -5.00616   ACGCTGTCCGGCATC              GCGCCGG GCG CAGGCGA              TTTTTTCAAACGCAA  81 127
        batB  509603 ..  509639 + -11.3  -3.09785   GTGGCGTATTGACCG    GGGGCCGGGCCGGCCGC TCG GCGGCCGGCATTGCGGC    TATATTGGCGTATGC  64 29
LK412_RS02555  510325 ..  510340 + -11.8  -5.10461   GCCCACGTTTTGAGA              CGGCCC TTGC GGGCCG               TTTTTCTTGCGTGCG 100 118
LK412_RS02560 NONE
LK412_RS02565 NONE
LK412_RS02570 NONE
LK412_RS02575 NONE
LK412_RS02580 NONE
LK412_RS02585  516438 ..  516454 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
LK412_RS02605  520377 ..  520395 + -10.3  -3.07222   CGCGCGGCATTGCCT             TCCTCGC AGGCC GCGAGGA             TCTTCAGGTGCTCCT  59 110
LK412_RS02625 NONE
        rimO  525765 ..  525784 + -11.4  -3.28712   CGGCGCTCAAGCCGC            GCGCCATG AAGG CGTGGCGC             TTGTAGCGCAGCCAA  66 434
LK412_RS02640 NONE
LK412_RS02645 NONE
LK412_RS02650 NONE
LK412_RS02655  528706 ..  528726 + -11.8  -3.36492   ACGAAGACGTCCACC            GGCTGGCG CTTGC CGCCGGCC            TTCTGCAATTCCAGC  66 82
LK412_RS02680 NONE
        dprA NONE
LK412_RS02690  535552 ..  535580 +  -4.3  -3.20723   CCCATACGCCCTCCT        CATGCTACGCGGC CTC GCCGCATCGCCCG        TTCCATTCATGAACA  47 131
LK412_RS02695  536277 ..  536313 +  -2.2  -4.28254   CAGGTTGGCGCCGGC   GCCCGGCGTCACGCC-CA GGA TGCGGCGC-ACGTTGGGG   TTTTCGCTCTTGAGC  65 237
LK412_RS02715  540835 ..  540860 + -10.3  -3.35679   GCACGGCCACGCCGT         CGACCTGGCGC ATCT GCGCCACGCCG          TTCTCGGTGACGACG  63 290
LK412_RS02730  543034 ..  543068 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS02750  546856 ..  546870 +  -8.5  -3.14132   AGCACGACCAGCATG               CCGCC GCACA GGCGG               TTGATCCAGCGCAGG  56 123
        rsmB NONE
LK412_RS02765 NONE
LK412_RS02770 NONE
LK412_RS02775 NONE
        trkA NONE
LK412_RS02785  555406 ..  555432 + -11.4  -2.70232   TTCTGGCGCAAATAG         CGGCGCGCGCGG CCG CTGCCCGCGCGG         TGGTGTACTATTCAG  62 26
LK412_RS02790  556391 ..  556433 +  -3.2  -3.14344   TGTCGTCCGGCATGG TGGCGACCAGCGTGGCGTGC GGC GCATGCCAGGCTGCATGGAA TTCCTCGCGCGGGTC  45 398
LK412_RS02800  557896 ..  557931 +  -2.3  -3.54424   CGGACTGCCGCGGGT    CGCTGGCCGGGCGCG TAAAGT CCCGCATGGCAAGGG     TTTCGGCGCGTCCCG  48 167
LK412_RS02805 NONE
LK412_RS02810  560055 ..  560101 +  -8.6  -3.53224   TGTCGCAGTCGGGGC CG-CAGCTGGACTATGGCCTG GATGTG CAGGCCGAGGACCTGCTGGCG TTTGCGCGCGCGCTG  62 262
LK412_RS02820 NONE
LK412_RS02825  562602 ..  562613 +  -7.2  -3.68351   TGGATGCGGCGATCT                CGCC GTCT GGCG                 TTTCGCTGGTGACGC  64 278
LK412_RS02850 NONE
LK412_RS02855 NONE
LK412_RS02860 NONE
LK412_RS02865 NONE
LK412_RS02870 NONE
LK412_RS02875 NONE
LK412_RS02880 NONE
LK412_RS02885 NONE
LK412_RS02890  576803 ..  576822 + -13.6  -4.52589   ATAGTGGTTACCTGC            CGGGCGTT TGGT AACGCCCG             TTTTATCTAAGGGAA 100 37
LK412_RS02895  578481 ..  578495 + -11.4  -3.09635   CGGCGCCCGCCAGGC               GTGGCC GTA GGCCAC               TTCGATGCTCAGGCT  62 125
LK412_RS02905 NONE
LK412_RS02910  581085 ..  581106 + -10.1  -3.05384   AAACCGGCGTGCACG           TCGCCGCCG ATGA TGGCGGTGA            TTACCTGCGGAAAGC  59 423
        gpmA NONE
LK412_RS02945 NONE
        cptA NONE
        moeB  589029 ..  589063 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS02965  590962 ..  590998 + -23.8  -2.71693   ATGTAAACCCCCCAC    CCGGGTGCCTGTCCCC GCACG GGGGACAGGCACCCGC    TGACTTTCCTTCCTC 100 35
LK412_RS02980 NONE
LK412_RS02985  595659 ..  595690 +   -15  -2.60075   GGGCCTCGTCCTCAT      GCGAACGCGCCGCC CTCG GGCGGCGCGGCTGC       CTTCATTCGACCCGC  71 45
LK412_RS03070 NONE
LK412_RS03075 NONE
LK412_RS03080 NONE
LK412_RS03085 NONE
LK412_RS03090 NONE
LK412_RS03095 NONE
LK412_RS03100 NONE
LK412_RS03105 NONE
LK412_RS03110  623047 ..  623075 +  -3.7  -3.31726   GTCCACCAGCGCCAC       CCCG-GCGCCGG CCTGGA CCAGCGCGCAGG        TATTCTGTGGCGACC  47 199
LK412_RS03120  624949 ..  624959 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS03125  626125 ..  626137 +  -6.9  -3.29144   GAACACCAGGGCCTT                GGGCG CGA TGCCC                TTGTGCAGCAGGTCG  52 187
LK412_RS03145  629699 ..  629712 +  -4.5  -3.53733   AGGCCTGAACAGCGC               CCGGT GATC ACTGG                TGTTTATCACCTCCG  52 33
         dld  631914 ..  631929 +  -6.8  -3.03124   CGGTACGCCGAACTG              CTTGCG CGTG CGCAGG               TATTCCGCCGTCAGC  48 408
LK412_RS03190  640337 ..  640395 +  -7.5  -2.70932   GCTGCATGAAGGCCT CCAGCACGCGACGCGGCCTGGGCACGGGG ATCCA CGCCATGCCCAGGC-GCAT-G-G-GCTGG TGCTTGCCGGCCAGG  49 189
LK412_RS03210  645578 ..  645588 +  -2.4  -3.17075   GCGGGACGGCCATGC                 ACGG CGC CCGA                 TTGCGTTGCCCACCA  42 42
LK412_RS03215  646623 ..  646636 +  -3.7  -2.56596   AACCATCGCCAACGT               CGCCG ACAT CAGCG                TCGATTGATCGACAC  40 4
LK412_RS03220  647858 ..  647870 +  -4.7  -4.20696   GGGACAGCCTCCCTG                ACCGG CCG CCGGC                TTTTCCCCTTACTCC  66 202
LK412_RS03230  650591 ..  650605 +  -2.1  -3.17075   CAATAAAGCACCTGG              C-AGGC AAAG GCCTCG               TTGAGTTCCCACAGA  43 267
LK412_RS03245 NONE
LK412_RS03250 NONE
LK412_RS03255 NONE
LK412_RS03260  659896 ..  659913 +  -4.7  -3.95378   ATGCCTGCCCTGGTT             CGCGCGC CGCG GCGTTCG              TTCTTTCGGGTCTCC  61 56
LK412_RS03265 NONE
LK412_RS03270  663128 ..  663138 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS03275  664218 ..  664249 + -12.2  -3.03338   TCAGTTCGAAGGTGC      GCAGGCGGGCCAGG CGCG CCTGCTCCTCCTGC       TGTTCGCGGACTTCT  67 101
        hemA  666167 ..  666193 + -11.5  -3.58231   GACCCCGCCTTCGCG         GCGGGCGTTCG TGCGC CGGGCGTCCGC         TTGTGTCCATTCTTT  72 53
        prfA  667314 ..  667324 +  -2.4  -3.14344   CGATCTGTGATGCGC                 GGGC GAT GACC                 TTGCTCAAGGACCTG  42 31
        prmC NONE
        grxD NONE
LK412_RS03305  669087 ..  669113 + -22.4  -3.64703   CGCCTGCCTGTACCT         GAAGCCTGCCCC GAT GGGGCAGGCTTC         TTTGCGTACGGCCGC 100 53
LK412_RS03310 NONE
LK412_RS03315  671522 ..  671564 + -12.7  -3.30441   CCGCCACGAGCAGGG CGCGGTCT-GCATTGGCGCG ATGA CGCGCCAGCGCGAGATCGAG TTCTCGCCGCTGGTG  71 241
LK412_RS03325 NONE
LK412_RS03330 NONE
LK412_RS03335  675583 ..  675631 +  -7.9  -3.14132   CGCGGCGCCTGTAGC CGCGGCC-GCGCCCGCGGGCAG CGTGGT CAGCCCGGATGCGCAGGCTGTG TTGCTGCAGGCGCAG  54 130
LK412_RS03340  675871 ..  675895 +  -7.8  -2.91582   TTCCGATACGCGAGG         CGCCTG-TCCC GCAT GGGAACTGGCG          TCTGTCCGTGCAGTG  52 61
LK412_RS03365  681035 ..  681078 +  -9.5  -3.44222   CGGTAGGGCGGGGTT CGGTGTGGGTGCCAGTCCCC GCAAG GGGGACAGGCA-CCGTGGCG TTACTTGCTGCTTTG  63 35
        purT NONE
LK412_RS03415  690215 ..  690225 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
LK412_RS03420  691576 ..  691592 + -10.8  -2.73875   GAAGGTCCTGACCGG              CGCGCG GGTGG CGCGCG              TGGTGTTCCAGAACC  60 372
LK412_RS03430  693965 ..  693982 +  -8.3  -3.90112   GACAGGGCAGGGCCG             CGCCGCC GCCA GGCGGCC              TTTCCTTGAAAAACC  70 41
LK412_RS03435 NONE
LK412_RS03440 NONE
        aspS  696976 ..  697008 +  -9.8  -3.64703   GCCAGCGGCCGGAAT     CGGGC-AGGCCGGGC AATG GCGTGGCTTCGCCCG      TTTCGATAACGCGCC  70 81
LK412_RS03450 NONE
        clsB  699181 ..  699193 +  -6.2  -3.14132   CGCCGGCCAGGATGC                GCGG CGTCA CCGC                TTCGTCCAGGAACCA  50 111
LK412_RS03480  704145 ..  704188 +  -8.1  -3.18199   CGAACCGCTGCAGTA AAC-C-G-CGGCGTCCGCCGGC CTC GCCGGCGGACGCTGTCCGCGCC TTGCCTTGCGCCTTA  54 25
LK412_RS03485  705553 ..  705577 + -10.7  -2.71011   ACGCCGCCTGAAGCG         CGGCGGCCGC CAGCCC GCG-CCGCCG          TGCTTCAGCCGGCGT  60 30
LK412_RS03495  707605 ..  707635 + -10.3  -3.43446   GGGGCTGGGGCAGCA       GGCCATGCGCGCG CGCAA CCCGCGCCTGGTC       TATTGTTCGGTATCG  65 374
LK412_RS03505  709344 ..  709362 +  -8.1  -3.47227   CGCGTCGGACAGGCC            GGCGC-CG ATGC CGCGCGCC             TTGTCGTCCTTGCCG  58 209
LK412_RS03565 NONE
LK412_RS03570  722052 ..  722079 +  -7.6  -3.22884   GCCCCCTTACCGGAA        GTC-CGGCGCGCG CTT CTCGCGCAGCGAC        TTGATGCCTTCGTGC  56 114
LK412_RS03580 NONE
LK412_RS03585  724303 ..  724334 + -13.1  -4.20516   CTCGCGGCGCCGCCG      CGTTGCGTCTGGCC TGTCT GGC-AGACGCGACG      TTTCTTCCGTCCCCC  91 149
LK412_RS03595  727187 ..  727218 + -17.2  -3.53012   TGGCCCAACCTATCT      GACCGGCCGGGCCG GCGA CGGCCGGACCGGTC       TTTCGAAGACCACCA  89 24
LK412_RS03600 NONE
LK412_RS03605 NONE
LK412_RS03610 NONE
LK412_RS03615 NONE
LK412_RS03620  732965 ..  732992 + -21.4  -3.62597   TGCACCAAGGGCGTG        GGTGCCTGTCCC CGTG GGGACAGGCACC         TTGTTCCCCCCTCCG 100 56
LK412_RS03700  750111 ..  750135 +    -7  -3.01791   GAACAGGTTGAAGTA          GCTGGCCGCG TCCAT CGCCGCCACC          TGTTCGGCCGGCGAT  51 234
LK412_RS03715 NONE
        folB NONE
        ttcA  756226 ..  756236 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS03735  757366 ..  757385 +  -3.4  -3.30124   CGTTCACATAACCCA            GGTGCGGC GTAA GCAGCACG             TTGTCCAGCGTGCGC  47 151
         rpe NONE
LK412_RS03770  763698 ..  763723 +  -6.7   -4.7497   GAAGTGCAGCGCCAA         GCCCGGAACCCG TAA CTGGA-CCGGGC         TTTTTGCTGCATGCC  84 212
        trpE NONE
LK412_RS03780 NONE
        trpD NONE
        trpC  767779 ..  767811 + -12.6   -3.8186   CCGGCCTCAGCGGCC     GCTGCCG-CGCGCCG GCGC CGGCGCGCCGCCCGC      TTCTTCCTTGCGATG  81 55
LK412_RS03805  769412 ..  769446 +  -3.3  -3.15663   CCGTAGGCCGACTTC     CGCCGCCTGCCGCGG CCCAA CTTCGACATGCTGCG     TTCGTCGGCCTGGCT  44 35
LK412_RS03810  770607 ..  770617 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS03815  771642 ..  771674 +    -9  -3.04322   GGGCGGTCTGGAACA      TGACGCTGCGCGCC TGCTC GGCGCGCATGGCCA      TCTTGGCCAGTTGCC  57 46
LK412_RS03825  773834 ..  773875 + -10.1  -2.78463   ACAGCACCAGCGATT CGATGTC-GCTGCCCACCTG GGT CAGGTCGGCGGCCGTCATGG TGTGGTCCACGCGCT  56 113
LK412_RS03860  780089 ..  780124 +   -19  -3.14132   GCGTGCTGGCGTATG    ACGGGGTGCCTGTCCC CGCT GGGACAGGCACCCGGA     TTCCTGCGGGAAGAG  90 76
LK412_RS03875 NONE
LK412_RS03880  784534 ..  784552 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 202
LK412_RS19820  793798 ..  793817 + -12.8  -5.60993   TTACAGGTAAAAAAA            CCGCTGGC CCTT GCCGGCGG             TTTTTTTATGCGCGG 100 51
LK412_RS03910 NONE
LK412_RS03915  797622 ..  797678 + -16.4  -2.80398   AGGGACGTTGCGCGC CGGCGTCCCG-TCCCGGGTGCGGCGCC TGGC GGCGCCGCACCCCGTATCGAGTTGCCA TGCTTGCATTCATTC  77 49
LK412_RS03930  800419 ..  800474 +  -2.5  -4.45175   ATACGTCTACACGAT GAACCGTGTCG-GCAAGATCGTGCCGC CCAA GCGGCA-GATCCTGCGCGACATCTCCC TTTCCTTTTTTCCTG  67 143
LK412_RS03945  802924 ..  802939 + -11.8   -4.7497   CGCCTCAACGAGAAA              CCCGGC TTCG GCCGGG               TTTTTCGTGGCTGCC 100 66
LK412_RS03950  804273 ..  804311 + -20.3  -3.25113   CGGGGACCAAGATTC   AGCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGAG   TATTCAGTTTTGCGG 100 68
LK412_RS03975 NONE
LK412_RS03980  811033 ..  811076 +  -7.5  -3.28712   CGCGCCGCAGGCTGA CCTCGACCGGCGGCGCGCCATG ATG CA-GG-GCGTTGCCGATC-AGG TTGTCCAGCAGGCGG  55 299
LK412_RS03995  814342 ..  814352 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
LK412_RS04000  815367 ..  815378 +  -7.2  -3.95456   GCTAGCCAGTTCCCG                GGGC CGCG GCCC                 TTTCCTGTTCCGTTT  66 36
LK412_RS04005  816700 ..  816742 + -14.1  -2.78384   CGGTTTCGAGCAACT GGCGCTCGTCGGGGCCGATG TGGC CGTCGGCCTTGGCC-GCGCC TATCATGGCCACCAG  67 302
LK412_RS04015  817827 ..  817845 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 214
LK412_RS04040  822888 ..  822901 +  -2.3  -3.02166   GCCGACGATCCGGGC               CGGTG ATAA TGCCG                TACTTTCATTCCGGC  41 20
        rnhA  823569 ..  823603 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS04080  832729 ..  832741 +  -9.1  -3.02511   TGCCACAGCACCACG                TCGCC GTT GGCGA                TATTGAACGCCTCGC  55 368
LK412_RS04115 NONE
LK412_RS04120 NONE
LK412_RS04125 NONE
LK412_RS04130  841320 ..  841373 +  -4.3  -2.94144   GCGCGGGGGGTGCAC TGATGATCCGCCTGCCGCTGCGCCGC GCC GCGCTCCTGCCGCTGGCCG-TCATCG TCCTTTACCTGCCGG  44 23
LK412_RS04135 NONE
LK412_RS04140 NONE
LK412_RS04145 NONE
LK412_RS04150 NONE
LK412_RS04155 NONE
LK412_RS04160  847270 ..  847280 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
LK412_RS04165  848461 ..  848475 +  -3.4  -3.78934   GATACCCGCAACGAT               CCCCGG CTT TCGCGG               TTGTTCTCCAACCGC  56 202
LK412_RS04175 NONE
LK412_RS04180 NONE
LK412_RS04205 NONE
LK412_RS04210  859047 ..  859074 + -11.4  -4.50976   GTAGCGCCCCGGAAA        GCCCGCATAAACT TCA GGTTT-TGCGGGC        TTTTCTCATCTGGAC 100 63
LK412_RS04215  859599 ..  859618 +    -7  -3.08679   CCGTAGCTGAAGAAC            GCGTCAGC GAAG GCGGGCGC             TATTGCATCGAGCCG  52 35
LK412_RS04230  860675 ..  860685 +  -3.2  -3.41602   GGGTGATGGAATGAA                 TGCC CTG GGTA                 TTGTGATACCATGCA  48 27
LK412_RS04235 NONE
LK412_RS04240  862099 ..  862132 +  -4.6  -4.36411   CCAAGCTGATTACCG    TCCACAACCCGGTTGT CTGA GCA-CCGGGTCG-GGA     TTTTCGTCATTCATG  69 6
LK412_RS04245 NONE
LK412_RS04250 NONE
        ureC NONE
        ureE  865856 ..  865890 +  -6.3  -3.45073   TGCGCCTGCGCGATG    TGGGCGCTGCCGCGCG AGGC CGGGCTG-GGCGCCTA     TGTATTTTCGTGGCT  55 444
        ureG  866865 ..  866905 +  -8.7  -3.58726   GCTTGCCGAAGATTC  CCGCGCACGCGCTTGCTCG GTG CGGGCCGGCGCGCCTGCCG  TTATATATAGAGGAC  62 99
LK412_RS04315  879890 ..  879907 +  -9.1  -3.16564   CAGGGCAGGGCGTTG             TCGCGTC CGAT GACGCGG              TTGGTCGAATAGGCG  56 422
        coq7  882678 ..  882701 + -16.8  -6.06723   CCTTTGGTGGATTTA          GCCCGAGATC GCAA GATCTCGGGC           TTTTTTTTTCGCCGC 100 465
LK412_RS04340  884147 ..  884157 +  -6.8   -3.1506   CATACAATTCCGTAG                 CCGT CAC ACGG                 TTGATAGGGAGATTT  52 102
        tviB NONE
LK412_RS04350  886471 ..  886483 +  -4.8  -3.51232   CCATGCCCTGGTACA                CGCA ATTCC TGCG                TTGATTTGAAAGCCA  52 9
LK412_RS04355 NONE
LK412_RS04360 NONE
        asnB NONE
LK412_RS04370 NONE
LK412_RS04375 NONE
LK412_RS04380  894664 ..  894691 +    -9  -2.60571   GCCAGGATCTCGGCC        TGCTGCGGGTCG GACT CGACCAGCCGCG         CTTCCTTGAGCGCTT  51 325
LK412_RS04395 NONE
LK412_RS04400 NONE
LK412_RS04405  900438 ..  900463 +  -3.1  -3.54543   GGCTGGCGCTGCCGG         CGGGTGGCGCA TGAG TGCACGGCCTG          TTTCCGGCAATGGAT  49 12
LK412_RS04410  901832 ..  901858 +  -5.9  -5.40072   ATTTGACATCGATTT        GACGCCCAA-CA GGTA TGCTTGCGCGTC         TTTTTTTGCAACGAG  95 87
LK412_RS04415  904071 ..  904090 +  -7.1  -3.16564   CGCCCCAGGGCAGGT            CGAGCGGC TGCTT GCCGC-CG            TTGGTCAGCTCCAGC  53 285
LK412_RS04430  907854 ..  907880 + -10.8  -3.18582   GGCCAGCAGCAGGAT         CAGCGCCGCG TTCAGCT CGCGGCTCTG         TTCGTCGCTGAGGTC  64 131
LK412_RS04455 NONE
        lolB  914133 ..  914149 +  -6.5  -2.52896   CGGCGGTCTAGAATA              GGGGC ATCCCCA GCCCC              TCGCTTCCGCCGTGA  45 46
        ispE NONE
LK412_RS04470  915156 ..  915198 +  -4.2  -5.79595   CCAATACATAAAAAA GCTGTTGAAC-G-CGCCCGT CAGAC ACTGGCTCCAGTTCAGCAGC TTTTTTGTTTTACGA 100 43
LK412_RS04475  916275 ..  916299 + -12.8  -4.07885   GCGGCGCGCAAAAAC          CACGCAGCGC ATGTC GCGCCGCGTG          TTTTAACCGGCGATC  83 81
LK412_RS04480  917010 ..  917048 + -24.8  -2.91695   CGTGCCCGACGTCCC   CGAAACCCTGCGCATGCG ATT TGCATGCGCAGGGTTTTG   TACTTTACAAATACG 100 79
         pth NONE
LK412_RS04490 NONE
        ychF  919677 ..  919695 +  -6.7  -3.05816   TGGTGGACAGATTGG             CCCGTTG TAAAT CAATGGG             TTGCATAAACAATAC  51 78
LK412_RS04500  921073 ..  921100 + -16.4   -3.4285   GCGAAGTGGGTAGAA        CGGCCTTATCCT TTTC AGGATAGGGCCG         TTGTCCCTTGAGTGC  85 67
LK412_RS04505  922741 ..  922752 +  -2.2  -4.00042   AAAGGTGAACACGAG                CAGG CGGG TCTG                 TTGTTTGATGAAGGC  56 347
LK412_RS04510 NONE
LK412_RS04515 NONE
LK412_RS04520  929986 ..  929996 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 145
LK412_RS04525 NONE
LK412_RS04530 NONE
LK412_RS04535 NONE
LK412_RS04540 NONE
LK412_RS04545  934004 ..  934018 +  -3.5  -3.72893   CGCGTTGCTCTGTCG               TGGTG ATGGG CACCG               TTTGCTCCCGACCTC  55 436
LK412_RS04575  943185 ..  943212 + -10.5  -3.08679   GCCAAGCGCGGCGCC        GGCG-GCGCGCC GGCCG GGAGCGCTCGCC        TATTGCCTGGCCCCG  62 49
LK412_RS04585  945765 ..  945792 + -13.4  -3.34398   GCGCAGTTCTTCATA        TCGGCTGCTGCC GCGC GGCAGCAGCAGG         TCTTTCCAGGCGGCA  74 237
LK412_RS04610  950960 ..  950978 +  -4.6  -2.78596   CAGAAAATATATATA             CCTACA GAAAACA TGTAGG             TATAATCCGAACATC  43 85
LK412_RS04615 NONE
LK412_RS04620 NONE
LK412_RS04625  954675 ..  954693 +    -3  -3.01001   CCCCTCGCATACAAC             GACAAGGA GAC TCCATGAC             TGTCATTTCCCGCTA  42 163
LK412_RS04630  955709 ..  955749 +  -4.7   -3.2794   AACTAGGCTTGCGGG TGGCTACCGGG-TGCGGGCC GCAA GCCCCGCAGCCCGGC--CCA TTGGTGTCCATGGAC  49 35
        modA  956997 ..  957013 + -15.1  -3.21276   GGCCGGATCGTCGTC              GGCGCGC GGC GCGCGCC              TGTTCTGCCAGGGCC  76 417
LK412_RS04645 NONE
LK412_RS04650  958996 ..  959024 + -11.6  -3.30771   TCGACATCGGCTCGG        CCGGCCGCGTGG AAGTG CTGCGCGGCCCG        TTCTCGGCCCTGTAC  68 419
LK412_RS19840 NONE
LK412_RS04670  961322 ..  961333 +  -7.2  -5.30616   CAGTCCATGAACCAC                CGCC TTCC GGCG                 TTTTTATTTCCCTCG  95 113
LK412_RS04675 NONE
LK412_RS19845  961879 ..  961905 + -13.7  -3.09831   GTCGGTCTCGCCCCA        TGACGGCCGCCC CCCG GGGCGGCCG-CG         TCCTTTTGCGGTACG  73 51
LK412_RS04685  963504 ..  963520 +  -5.7  -4.36914   AGGTCCGCTAAGCGG              GCGGGGC GCG GGCCTGC              TTTTGTGGGCGCGAC  72 30
        modA  964400 ..  964410 +  -2.4  -2.61264   CTGTAACCCCTTGCA                 GGAG TCC CGCC                 CTTGTCGCTGACCAG  38 35
        modB NONE
        modC  966582 ..  966605 +  -5.2  -3.72576   CCCTGCCCTGCGGCT          TG-GGCCCGGC GTA GCTGCGCCGCA          TTTCGTAAAGCCGCA  58 394
LK412_RS04720  970572 ..  970594 +  -6.8  -2.53911   GAATGCCAGTTCGGC           CAGCCGGCGG ATG CCGTCGTCGG           TGAATTCCAGCTTCA  44 243
LK412_RS04750 NONE
        aztA NONE
LK412_RS04760 NONE
LK412_RS04765  977779 ..  977835 +  -7.8  -2.91264   AACTCGCCGCCGCCT TGCGGCCCTG-AC-GGCGCTGGGCGCGC TGT GGGCGGCCGGCGCCGGTGCGCATCCGCA TATGTGGATCGACGC  52 15
LK412_RS04770 NONE
LK412_RS04775  979408 ..  979420 +  -4.7  -3.23637   GACGAATTTTGCACG                CCCGG GTG CCGGA                TTCAATTGATATGTT  49 56
LK412_RS04780  981904 ..  981927 +    -3  -3.85698   GGCGCCGGCGGCAGC          CAGTTGCGGG CGCG CCTGCAACCA           TTTGTCCAGCGCGGC  56 362
        metK  987459 ..  987477 + -17.4   -4.4078   TCCCGTGTCGCGAAA             CGCCCCGC CTG GCGGGGCG             TTTTGCTTGGCCGCG 100 48
LK412_RS04815  987800 ..  987814 +    -7  -3.08371   GCAACAACTACTGAG               GGGCGC ACG GCGGCC               TGTCTTGGCCATGTC  52 27
LK412_RS04820  989116 ..  989149 +    -6  -3.34005   ATGAAGCGGGAAAGG     CGAGTACGCGCCGTG CGGAT CATGGTGC-TACGCG     TTGTCCGGCTTCATT  53 223
        ahcY NONE
LK412_RS04830 NONE
        metF  991899 ..  991909 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS04840  993029 ..  993041 +  -6.2  -3.01924   GAAGCGCTCGAACGC                GGCC AGAAA GGCC                TGTTCGGCGGCGCTC  48 141
LK412_RS04865 NONE
LK412_RS04870 1000664 .. 1000684 +    -4  -3.57561   CAAGGGTTCGGGCAT           GTCGC-GGCC CAC GGCCAGC-AC           TTTGAACAGTTCGCC  51 94
LK412_RS04890 NONE
LK412_RS04895 1006331 .. 1006344 +  -2.3   -4.2349   ACTGGTCGTCCACCA               TCGTG GCGC CGCGG                TTTTCCATCTGCCAG  61 271
LK412_RS04925 NONE
LK412_RS04930 1013214 .. 1013228 +  -2.8  -2.95102   CTCGCGCGCAGTATT               CATGCA GTA TTCATG               GTTTGTCCCTGCCGT  42 55
        ssrS 1013418 .. 1013452 + -12.3  -3.05993   CAGGCGGGGCATCTA    TCC--AGGCAGGCCTGT ATC GCAGGCCTGCCTTCGGA    TGTCTCTCTCCCTCC  67 27
        ilvD NONE
LK412_RS04960 NONE
        msrA 1019216 .. 1019247 + -10.8  -3.69256   GGATGCCTTCGCCGC      GGTACAGGTCCAGG TATT CCTGGATCTGCCCC       TTCTCTTCGGTGCCT  74 458
LK412_RS04975 1020856 .. 1020870 +  -4.9  -3.56643   GCGACGAAGCCGGAA               CCGCG AATCA TGCGG               TTTGCAGGATCTCCG  52 289
LK412_RS04980 NONE
LK412_RS04985 NONE
LK412_RS04990 1023315 .. 1023353 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
LK412_RS04995 1026578 .. 1026588 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 139
         rrf 1026763 .. 1026797 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
LK412_RS05005 1027740 .. 1027760 +   -14  -4.54727   CGGTTCCGCTCGCAA            CGGCTGGC TTCGT GCCAGCCG            TTTTCGTTTGCAGGC 100 56
LK412_RS05015 NONE
        pyrC 1030996 .. 1031050 +  -9.9  -3.56862   TCGCGCAGATCCCAG GCGCTCAGCCGTGCCGCG-CGCACC GGCTTGG GGCGCGCCGCGGCG-GGCTTGGCGG TTTCGGCGGGTTTCT  67 285
        rnpB 1033124 .. 1033144 + -19.7  -2.52464   TGCATTTTCATGACA            GCCGGCCGG AAT CCGGCCGGC            TGGCTTACGGCGCCC  93 41
        mraZ NONE
        rsmH NONE
        ftsL 1035185 .. 1035206 +  -6.5  -4.16016   AACCAGCCCGCCGGA           GGCGCCCAGT GAG GC-GGGTGCC           TTTCTTCGACAATCC  66 14
LK412_RS05050 NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
LK412_RS05085 1047054 .. 1047066 +  -3.3  -2.87132   CGGCGCGACAAGATT                GAACG GGA CGCTC                TGTGTGGAACGACGC  41 24
LK412_RS05090 NONE
        ftsA 1049222 .. 1049233 +  -3.6  -3.55622   CCGTTGCGGACCACG                GTCG GCTT CGGC                 TTTGAGGCGATTCAC  51 127
        ftsZ 1050678 .. 1050689 +    -3  -3.63968   CCGGTTATGCCGGTG                TCTA TTGG TAGA                 TTTCCGGCTTTCGCA  53 210
        lpxC 1051672 .. 1051700 + -14.6  -4.57073   CGATATCGGTTTTCG        TCCTATGGCCGC GCTGA GCGGCCATAGGC        TTTTTGGCGGGGATG 100 52
LK412_RS05115 1053331 .. 1053356 +  -5.4   -3.5394   CACGGCAGGCCGTTG         CGGTCCAGGT GCGTTA AACTGGATCG          TTTCCCGGCGGGTTT  54 77
        secA NONE
LK412_RS05125 1057066 .. 1057079 +  -5.9  -4.19704   TGCGTGATCCATGGA               TGGCC GGCA GGCCG                TTTTCACTGACCTTA  70 161
LK412_RS05130 1058442 .. 1058473 +  -8.6  -2.82635   GGCAATGGTGAAGCT      GCCGTGCGGGTCGGC GTA GGCGACGTGC-CGGC      TGTAGTGATCGGGAT  53 368
LK412_RS05145 NONE
LK412_RS05150 1061433 .. 1061464 +  -4.3  -2.62396   GGCGTGCGCCGTGAA      CGGGTTTTGCCTG GCGGGG CATGCCAGGCCCG       TCATCTCGCAAGGTA  42 79
LK412_RS05155 1062357 .. 1062375 +  -6.7  -4.37092   ATGCCCAGGCGGGTA            TCGG-CGC CGAT GCGGCCGA             TTTTCTGGAAACCAT  72 212
LK412_RS05200 1071162 .. 1071175 +  -5.9  -3.20991   CTGGATCGCAGCGTG               GCCGG CCTG TCGGC                TTGAATTCGGTTGGA  51 8
        aroQ NONE
        accB NONE
        accC 1073984 .. 1074034 +  -8.8  -2.55668   GTGCCCAGCTGGCAC CGCGACGACCCCGCCGTGCCGGGC CTGGT GCCCGACGCCGCGCG--CGACGCG ATTCATATCGAACTC  52 422
LK412_RS05225 NONE
LK412_RS05230 NONE
LK412_RS05235 1077302 .. 1077320 + -13.1  -5.40072   CTGCTTCCGGCAAGA             CGCCCGC TTCAT GCGGGCG             TTTTTTTGCGGCGGC 100 48
LK412_RS05240 1077818 .. 1077855 +  -4.8  -2.78384   CCTGCTGTCCCACCT  GGCCGCGATGGCAAGCGC CGTC GCGCT-GTCGCTG-GGCC   TGTACTGGGGCGCCG  43 44
LK412_RS05245 NONE
LK412_RS19850 NONE
LK412_RS05250 1080213 .. 1080228 +    -6  -2.56838   AGTCCTATCTGATCC              GCCGGG AGTG CGCGGC               ATGTATTTCGATCTA  46 29
LK412_RS05255 1081676 .. 1081688 + -10.5  -3.53091   CAGCGATTCCGGCGG                CGGCG TAG CGCCG                TTTCAGACGCCGAAT  67 18
LK412_RS05285 NONE
LK412_RS05290 1091952 .. 1091966 +  -5.6   -4.6951   GTCGGCAGTCCGGCA               CGCGGC GCT GTCGTG               TTTGTTTTGCGTGGT  77 185
LK412_RS05295 1092522 .. 1092577 +  -3.3  -3.40522   TTGTCGCCAGCGGCG CGCCAT-TCGGGTA-AGGTGGCGGACTT CCC ACGTC-GCCGCCGCTACCCGCCATGTCG TTGTCGTCCGAAAGT  48 44
LK412_RS05300 1094017 .. 1094039 + -11.2  -3.01712   TCAGGTGCTGGGCCG           CCAGCTCGGC GGG GGCGGGCTGG           TATTCGCCGCAGAAC  62 283
LK412_RS05310 1097930 .. 1097964 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS05325 1101378 .. 1101388 +  -2.4  -3.78934   TCTTTCGCGATCCTC                 TGCG ATC CGCC                 TTATTGTGACCAACA  54 126
        dbpA 1102762 .. 1102776 +  -4.2  -3.28712   CGGCGGTTCCGCATG               CGCTTC CTG GAAGAG               TTCTGAGCGCGGCGG  47 5
LK412_RS05335 1103773 .. 1103802 +   -12  -3.16564   CAGACCACGCTGCCG       CCGGCGGCGCGC ACCGCG GCGCACAGCCGG        TTGATGGGCTGCACG  68 521
        pmbA 1109589 .. 1109614 + -19.1  -3.02096   GCCGGCGCCGGCAGG         GTGCCTGTCCC CGTG GGGACAGGCAC          TGTCTCGTTCATGGC  90 51
LK412_RS05375 1111022 .. 1111056 + -21.5  -3.53012   GCCGCCGTTTCGGTC    CGGCCAGGGGCCGCCC TTCG GGGCGGCCCCTG-CTG     TTTGGGCGCAACGCC 100 45
        rplM NONE
        rpsI 1112135 .. 1112164 + -20.9  -3.28791   AAGCGCTAATGTCCC       GCAAAAAGGCCGC GAAA GCGGCCTTTTTGC        TTATGGCGCCCCGGT 100 32
        argC NONE
LK412_RS05395 1114168 .. 1114187 +  -4.2  -2.80074   CTGGAATTTTGAGTC            CTGTCGCG GCTG CGCTATAG             TGATCTTATCCGGGC  41 29
        erpA 1114651 .. 1114676 + -18.3  -4.54727   CCGGTCCGCGATCGA         GGCCCTTCGGC ATGC GCCGGAGGGCC          TTTTCGTTTGGGCGC 100 53
        tyrS 1119783 .. 1119793 +  -4.6  -3.30124   GCGTGTTAAGTTGGT                 GGGG TAG CCTC                 TTATCGAGGGTCCCA  49 19
LK412_RS05425 1120508 .. 1120529 +  -2.9  -4.62069   GGGCTTGCTTGAGCC           TGGCTCATG CCGA CTTGAGGCA            TTTTTGCGGTAGACG  71 52
LK412_RS05430 1121983 .. 1122004 + -15.9  -5.30155   GCCCGCCGCCGGCAA           GACAGGCCC GCAA GGGCCTGTC            TTTTTTCATTGATGG 100 59
        nrdR 1122894 .. 1122918 +  -8.6  -2.90194   TGCACGATGGCGTCC         TGCACC-CGGT GCAC GCCGGGGTGCA          TGTGGTTGCGGCCGT  54 330
        ribD 1125550 .. 1125564 +  -9.2   -2.9006   GCGATCGGAACGCGG               TGCGCG TGG CGCGCG               TCTATCCGATGGGTT  56 98
LK412_RS05470 NONE
LK412_RS05475 1129923 .. 1129965 +  -2.5  -3.72576   TTCTCGCGCGAGAAC GCGATGAAGC-GCTGGCCGTC CAG GTCGGCCAGCCGCG-CGCAGC TTTGCTGCGCCAGCG  53 380
LK412_RS05485 1131864 .. 1131898 +  -6.3  -3.65522   ATGCGCCGGCAATGG    CGCCGGCC-AC-CGCCG GAC CGACGAGCAGGCCGGTG    TTGTTGCCCTGCATG  57 138
LK412_RS05495 1133947 .. 1133992 + -15.3  -3.05498   GCCTGCGCGAAGGCG CGGCGGCGCTGCGCGGCTGACG CCG CATCGGCCGCGCCG-GCCGGTG TATATATATCGCATG  77 6
LK412_RS05505 1135791 .. 1135808 +  -9.8  -5.93809   TCGTAGCAACCTCTG             CCGGCG TTCATC CGCCGG              TTTTTTTTATCCGGC 100 225
LK412_RS05510 1136887 .. 1136917 +  -7.4  -2.66969   GCCGCCCGGGAAACC       GCTGCCGCGGATCG CTG CGATCCGCGCTCCC       TCCGTTGTCTTGATA  50 175
LK412_RS05515 NONE
LK412_RS05520 1138673 .. 1138686 +  -4.5  -3.35813   GAAGCCCGGCCCGGA               GC-GCG AAG CGCAGC               TTGATTGAAATCAAG  51 4
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD 1142811 .. 1142844 + -28.3  -3.86015   CCGGCCTTGGTTCGC     CGACAACCCCCCGGG CTTG CCCGGGGGGTTGTCG      TTTGTGGCGGGGGTG 100 74
LK412_RS19855 NONE
LK412_RS19860 1145178 .. 1145193 +    -4  -3.25823   GGCCAGTGCGTTGAC              GG-CGAA TCC TTCGACC              TTGGTCTGGCCCGAC  47 411
LK412_RS05575 NONE
LK412_RS05580 NONE
LK412_RS05585 NONE
LK412_RS05595 1154003 .. 1154019 +  -5.7  -3.44229   CTGGGTGCAATCCCG              GGGGTGC CGG GCGCGCC              TTGTCGTCGTAAGCT  53 54
LK412_RS05600 1154711 .. 1154761 +  -2.3  -2.62184   CCAGGCCGGCCATGA CGTGCCAGCCGACGGGCGGACGCGC CAG GC-CGGC-GCCCATCGCCTGGGCCA TCATGTAGGCGCCGG  38 227
LK412_RS05610 NONE
LK412_RS05615 NONE
LK412_RS05620 NONE
LK412_RS05625 1157564 .. 1157574 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS05630 1159048 .. 1159063 +  -2.6  -3.61178   AGTTTTCACGGGGCA              TGGTTA TTCC TAACTA               TTTCAAATGACTCGG  50 495
LK412_RS05640 1159984 .. 1159995 +  -3.6  -3.48395   CCAGCCTGCCTGCCC                TGCG TCAT CGCG                 TTCTATAGACGGAAT  49 6
        tldD 1161515 .. 1161532 +  -6.9   -5.9873   CCTGGCCTGGAAAAA             TCGCGTG GTGA CGCGCGG              TTTTTTTTGTGCTAG 100 66
        aroG 1163086 .. 1163106 +  -9.7  -2.52464   ACAAGGCGTAATCCT            TCATCGTGG CTG CCCCGATGA            TGGATTCGCGCCGGC  55 307
LK412_RS05660 1177050 .. 1177072 + -19.2  -4.72272   CGCGGTGCCCGGCAA           GCCCACGCGA AGG TCGCGTGGGC           TTTTTCATGCCCGCC 100 57
LK412_RS05665 NONE
        glcE NONE
        glcF 1181418 .. 1181453 + -15.4  -3.68619   GGCGGCCGGTATCGA    CGCGCGTCGTGCCC GCCACCCA GGGCTTGACGCGCG     TTTCGATGAATTCCA  88 408
LK412_RS05690 1185341 .. 1185378 + -20.5   -2.6563   GCGCGCGCCGTTAGG   CGGGCCCCGGCGCGGCGC CAT GCGCCGCACC-GGCCCCG   TGCCTTATTCCACGG  95 27
LK412_RS05720 NONE
        mnmA 1192688 .. 1192720 + -11.1  -3.73775   GGAGGCGCGCCGGTC      TCGCGGTGGCCGCGG CCG CGGCCGCCACAGCGG      TTTCATAAACCTGGG  73 63
LK412_RS05730 1193606 .. 1193661 + -24.2  -3.05596   CGGTCGGCGGCCAGG GTGGCCGGCAATGAAAAAGGCGGCTC ATGC GAGCCGCCTTTTTCATTGCACGCCGG TTCGGTCAGGCGGTC 100 62
        purB NONE
LK412_RS05745 1196372 .. 1196387 + -10.4  -5.96521   GCAAGGCAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 62
LK412_RS05760 NONE
LK412_RS05765 1200060 .. 1200094 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS05780 NONE
LK412_RS19865 NONE
LK412_RS05785 NONE
LK412_RS05790 NONE
LK412_RS05795 NONE
LK412_RS05800 NONE
LK412_RS05805 1206243 .. 1206260 +  -2.6  -2.66869   CGCGCCGGCGCGCCG             GCGCCA AGGAGA TGGCGG              TGAGTTCTTCCATAT  38 49
LK412_RS05810 NONE
LK412_RS05815 NONE
LK412_RS05820 NONE
LK412_RS05825 1209594 .. 1209635 + -14.5  -3.53012   CGGCGCGCCGCGTCC GCGCG-GCGCCGCC-GCTT CAGGAC AGGCCGGCGGCGCGCGTGC TTTCGGCCGACAAGC  81 43
LK412_RS05835 NONE
LK412_RS05840 NONE
LK412_RS05845 NONE
LK412_RS05850 NONE
LK412_RS05855 NONE
LK412_RS05865 NONE
LK412_RS05870 1218110 .. 1218126 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 525
LK412_RS05880 1219163 .. 1219187 +  -8.6  -2.66435   CGGATATGCCAGGGC         CG-GC-CGCTGG CTT CCAGCGTGCGCG         TCATCTCCTGGCGGT  51 298
LK412_RS05890 1220519 .. 1220533 +  -3.5  -2.72344   GTCCAACTGCTGGAG              GC-CGC CCAT GCGCGC               TAATTCGAACTCGAA  41 8
LK412_RS05895 NONE
LK412_RS05900 1222262 .. 1222278 + -10.8  -3.31144   GCCTGAAGGTATCGA              GCGCCG GCGAG CGGCGC              TTGTAGCCCTCGGGC  66 35
LK412_RS05910 1223925 .. 1223935 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 54
LK412_RS05915 1225277 .. 1225292 +  -2.5  -3.33696   TACAGATCAACTGAG              CC-GGC CGACC GCCTGG              TTCATTACCCAGGAG  44 27
LK412_RS05920 1226690 .. 1226720 + -21.8  -3.23899   CGCGCCGCGCTGAGC       GGCGCCTGGCCGGC CGT GCCGGCCGGGCGGC       TTGCCTTACTTGAGC 100 28
LK412_RS05930 1228760 .. 1228796 + -23.8  -4.26076   CCCGCCGCTCATCCC   GGCGCGGACGGCTTCCC TCGC GGGAGGCCG-CCGCGCC    TTTTCATGGCGGTGC 100 70
LK412_RS05935 1229652 .. 1229685 +  -8.7  -3.18681   GGCGGGCGTAGTGCT     CGGC-GTTGCCGGCCT GCT GGGCCGGCGTCAGCAG     TTCGTCGGGTTCGCG  56 400
LK412_RS05950 1232770 .. 1232812 + -12.6  -3.16564   GGCCAGGCTGATCAG CGCGGCGAACATGGTGCTGG TGT CCAGCGTGGTCGTCGCCGCG TTGATCAGGTAGCCC  68 140
LK412_RS05985 1238584 .. 1238594 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 178
LK412_RS05990 NONE
LK412_RS05995 NONE
LK412_RS06000 1242837 .. 1242858 + -12.9   -3.8591   CGTGTCGGTATCCGC           GGGCGCGGG CGTG CCCGCGCCG            TTATTCATTGTAGGA  83 52
LK412_RS06005 1244243 .. 1244268 +  -3.1  -3.15544   CGAAGGCGATCTGCG         GCGTGGCGTAA TAGC TGGCGGCGCGC          TTGGTCAGCATCAGC  43 186
LK412_RS06015 NONE
LK412_RS06020 NONE
LK412_RS06025 NONE
LK412_RS06030 1249124 .. 1249134 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 154
LK412_RS06035 1250601 .. 1250611 +  -8.2  -3.13899   CGAAATCGTACATGC                 CGCC CAG GGCG                 TATTCCTGCACGCTT  56 488
LK412_RS06050 1253859 .. 1253893 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS06060 NONE
LK412_RS06065 NONE
LK412_RS06070 1257772 .. 1257787 + -10.4  -2.89881   GCAATGCGCACAGGG              CTGCGG TTCG CCGCAG               TGTGTCGAATGAATA  59 243
LK412_RS06075 1258194 .. 1258209 +  -6.1  -3.31461   GGTCCGGGTGTCTTT              GCGTG GCGAGA CACGC               TTGTCCCAGTGGGTG  53 55
LK412_RS06080 1259436 .. 1259464 + -17.5  -4.11216   GGCTCTAGAAACCAA        GGCCTTGCAACTC GAT GCGTTGCAAGGCC        TTTTAAAAATGGCGG 100 127
LK412_RS06100 1261973 .. 1261983 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 65
LK412_RS06105 1263111 .. 1263167 +  -7.9  -3.63694   AAGAGCACGCTCAGG GCCACCGCGCCGGCGCCGCG-GGCG-GCC AGC GGCCCGACATGCA-CGCCGGCGTCG-GGC TTCTTGAAGCTGCCT  60 149
LK412_RS06125 1266879 .. 1266903 +  -5.6  -3.91897   GGACAGCCTCGTCCT         GGCGCGCCAGC CGTC GC-GGCCCGTC          TTTATCCGTGCAACG  63 51
LK412_RS06180 NONE
LK412_RS06185 NONE
LK412_RS06190 NONE
LK412_RS06195 NONE
LK412_RS06200 1279918 .. 1279928 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS06205 1281160 .. 1281187 +  -4.7  -4.07568   CGCCCCTGCCACCTC        GGCCATCGCCT GCACGA ACGCGGCGGCC         TTTTCCGCCACGCCG  63 253
LK412_RS19875 1283855 .. 1283868 +  -9.5  -2.78547   GCGACTCGGCCGATT               CGCGC ACCA GCGCG                TCCTTGCTCGGATCC  56 393
LK412_RS06250 1291864 .. 1291874 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 82
LK412_RS06255 1293007 .. 1293031 +  -3.4  -3.61517   GCACCATTGCAGCAC          CGCTTCGGCC GTCAG GGCCGGATCC          TTCTTCACGACGAAT  51 154
LK412_RS06265 1295931 .. 1295967 +  -5.1  -3.13403   GAGCGTGCGCGTCAG  CGGC-CGC-GGCAGCAGC CGCA GC-GTCGCCAGCGAGCCG   TCTTCGTGCCGCACC  47 132
LK412_RS06275 1297861 .. 1297887 +  -4.3    -3.445   GGAATCGTGAAGCTG         GCGACCTGAGC CGCGC GCTTAGGACAC         GTTTTTCCTGCATAA  51 17
LK412_RS06280 NONE
        mgtE 1299958 .. 1299968 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 157
LK412_RS06290 1301118 .. 1301132 +  -2.7  -3.70902   GCTCGGCGATCTCGT               CGTCC TCGAT GGCCG               TTTCCATGTAGGCGG  53 171
LK412_RS06310 NONE
LK412_RS06315 NONE
LK412_RS06320 NONE
         dxs NONE
       folE2 1309719 .. 1309732 +  -2.3  -3.09933   TGGCGGGCTATCCCT               TGCCG GGGC CAGCA                TTGCATGGCTTGCCG  42 190
        rpsF 1310158 .. 1310172 +  -7.1  -2.70932   GCGGCCGAGTAACAG               GGCTC AGACA GAGCC               TGGTTGGCAGACCCA  48 29
        priB NONE
        rpsR NONE
        rplI 1311384 .. 1311400 + -10.8  -5.75342   GCATGCCTGAAAAAA              GCCGGC CTGGT GCCGGC              TTTTTTTTCGAGGGC 100 48
LK412_RS06355 NONE
LK412_RS06360 1313819 .. 1313852 +  -2.9  -4.56597   CTGTCCGGCAAAGAT     CACCTGGGCCATCGG GATA CCGCTGGCCAGGCTC      TTTTTCGAGCCGCAG  71 160
        alaC 1319895 .. 1319909 +  -2.1  -3.07935   TCAAGGATATGTTCC               GCAAG GACGG TTTGC               TTAAATGAATCCGAT  41 3
LK412_RS06395 NONE
        thrC 1322647 .. 1322684 + -28.5  -4.26076   CAGGCTGTTTGCAAG   GGCAACCCCCGGCCGCC GCAA GGCGCCCGGGGGTTGCC    TTTTCATGGCCGTCC 100 51
LK412_RS06405 1323119 .. 1323143 + -17.1  -4.36914   GAACCGTGAAAAAAA          GCCCGCCGGCG CGA TGCTGGCGGGC          TTTTCTCGCGCAAGC 100 88
LK412_RS06410 NONE
LK412_RS06415 1325489 .. 1325506 +  -4.1  -2.52464   CAGCCACCGCTGGTA             CG-GGGTC AAA GACCTGCG             TGCCTTCGGGCACCG  40 130
        garL 1330142 .. 1330159 + -11.3   -4.0616   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTTGCCGTA  81 82
LK412_RS06495 1339399 .. 1339420 +  -2.8  -3.25072   TGCTGGCGTTGCGGG           CAGCCGGG GGGCGG CGCGGCGG            TTCGGTTATGATGCG  46 109
        xseA NONE
        sodB 1341547 .. 1341567 + -19.7  -3.75153   CACGTGCGATCGAGA            CGGCCCGGC CCT GCCGGGCCG            TTTGCATTGCAGCCA 100 47
LK412_RS06510 1343039 .. 1343062 +  -6.6  -3.05343   GGCGTCCACGGAATA          GACGGACCAC GTTT GGCGTCCGTC           TGTTGGACATCTGCG  49 25
        pcaF 1344389 .. 1344404 + -10.4   -5.1925   CCGGCATGGCAAAAA              GGAGCC TTAG GGCTCC               TTTTTTGCGTTCTGG 100 54
        clpS 1345869 .. 1345887 +    -8  -4.19704   GACCTGATCCGCATC             GGGCGCGG TCG CCGCGTCG             TTTTGCCTGGCCTTG  74 34
LK412_RS06535 NONE
        pbpC 1353335 .. 1353360 +  -2.5  -2.90496   AATCGTGTATTTGAC         CGCTTCGATGCG TTA CGGAG-GAAGCG         TGATTTCCCAAGAGC  40 56
        clpA 1355678 .. 1355691 +  -4.5  -2.94747   ACTGATCGACTGACC               GTGTG GATC CACGC                TCTCTGATCGCCTGC  45 28
LK412_RS06550 NONE
LK412_RS06555 NONE
LK412_RS06560 1359359 .. 1359387 +  -5.3  -3.16564   GACGCGAAAACAGAA        GGTTAACCTTTTT CGT ATACGGGTTAACC        TTAATACCGTACGCG  49 20
        putA 1363609 .. 1363619 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 292
LK412_RS06570 NONE
LK412_RS06575 1365803 .. 1365835 +   -17  -2.71712   TGATCGGCCTGTGCC     GGCGGCGCGG-GCTC CCCG GGGCGCTGCGCCGCC      ATTTGCCGCAGCCGC  80 38
LK412_RS06580 NONE
LK412_RS06585 NONE
LK412_RS06590 NONE
LK412_RS06595 1369477 .. 1369506 +  -3.3   -3.9461   TGGGCGAAGTCGAGG       CCTGAGCCAGTCC GCAC GCACGGGCGCCGG        TTCTTCTTGCGGAAC  58 21
LK412_RS06605 1371560 .. 1371575 + -11.8  -5.86061   CGTTCGATTTTCAAG              CCGCCC CTCG GGGCGG               TTTTTTTTGGTGGGG 100 58
LK412_RS06625 1377581 .. 1377593 +  -6.2  -4.15565   AGACCCATCTGGGCA                GCGG CCTGC CCGC                TTTTGCCATCGTCGG  66 211
LK412_RS06635 1380470 .. 1380503 +  -5.8  -2.64616   ACGATGGCCAGCGCC     GCGCCGGCGATCTG CACCAC CAGCACGTCGCCGC      TCATCTGGCTGGCGC  45 443
        cyoB NONE
        cyoC NONE
        cyoD NONE
LK412_RS06665 1386458 .. 1386490 + -14.1  -3.53012   GCGCCACGAGCTGCG     CGCGCGACGGCGCG GCTGAG CGCGCCGCC-CGCG      TTTGCGCCCGGGCGC  78 7
LK412_RS06670 1387234 .. 1387267 +  -5.1   -4.1899   CATCCGCATCGACGG     CGGCATCACGCGCTCG GTC TGAGCGCG-GCCGCCC     TTTTCAATCCGATCC  69 4
        hutG 1388247 .. 1388281 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS06695 1393020 .. 1393041 +  -7.9  -3.78419   CGCGGGCAGGCACCA           GGCGTCCTG ATGA CGGGGTGCC            TTGTATCTTTCCTCC  66 16
LK412_RS06700 1394385 .. 1394403 + -13.8  -3.21099   CGCCAGACAAGCAAA             CGGCCGCT CGC GGCGGCCG             TTCGTCATGGGGACA  73 173
        bioB 1396877 .. 1396898 +  -2.8  -2.64616   CCTGCCCTGCGCGGC           GGGCCAGG CATGAA CCAGGGCC            TGCTGTACCTGGCGG  39 13
LK412_RS06720 1397772 .. 1397801 + -23.7  -3.53224   GGTAACTACATACCC       GGGAGCCTGTCCC AGCG GGGACAGGCTCCC        TTTGCCGCGGCAGTC 100 36
LK412_RS06735 1400826 .. 1400843 +  -2.5  -2.57344   ACCGTACCAGGCCGC             GCCGGCC TTCA GCCCGGG              ATTGTGCGCCGCGTA  38 356
        moaC NONE
LK412_RS06755 NONE
LK412_RS06760 NONE
        moaB NONE
LK412_RS06770 1408052 .. 1408079 + -21.4  -2.70932   CCGAGGGACACCGCA        GGTGCCTGTCCC CACG GGGACAGGCACC         TCGTTCACCCCCCGA 100 138
LK412_RS06785 1411463 .. 1411473 +  -5.4  -4.09243   GAGAATATGTTTTCT                 TCTC GTC GAGA                 TTTTCCGCGCCTATG  64 105
LK412_RS06790 1412099 .. 1412116 +  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 54
LK412_RS06800 NONE
LK412_RS06805 NONE
LK412_RS06810 1417342 .. 1417371 +  -7.7  -3.28712   AGCGTGTAGGCGGCC       GGCTGCACCAGCGC GCC GCGC-GCGGCGGCC       TTGTGCGCCAGCGCG  55 297
         ggt NONE
LK412_RS06845 1424778 .. 1424836 + -21.6  -4.65895   GGTGGGGGCGGCGGG CCGCCGCAGCGGCGGCCG-GCTGCCGCG ATCGG CGCGGC-GCGCGGGCGCCGCCGCGCCCG TTTTTCGGTGGCGAC 100 45
LK412_RS06850 NONE
LK412_RS06855 1426937 .. 1426976 +   -15  -3.64703   AAGGCACCCCGGGAG  TCGGCAGGTGCCTGTCCT CGTG GGGACAGGCACCTGAGGG   TTTCAGTAGGGGCGC  83 281
         orn NONE
LK412_RS06875 1430842 .. 1430857 +  -2.4  -4.10657   CAGCACCAGGGCCTT              GTCGGG GATA CCCAGC               TTTTCGAGGATATCG  61 414
        paaA 1432492 .. 1432527 +   -11  -3.97636   GCCCACGCCGACAAG    CAGGC-GCGCCGCAAGG CGG CCTGACGGCGCCGCCGG    TTTCTCCATTCCAGT  79 2
        paaB NONE
        paaC NONE
        paaJ 1434527 .. 1434545 +  -5.9  -3.37796   GGCGTTCGCGGTGGG             CAGCGGC ATCAC GCCGGTG             TTCTCGCTGGTGAAG  55 405
LK412_RS06910 NONE
        paaN NONE
        paaG NONE
        paaI NONE
        paaF 1440676 .. 1440707 + -18.8  -3.55444   GGCGGGTTCGCAGGG      C-GCAACGCCGGCCG CCA TGGCCGGCGTTGCCG      TTTCAGGGGTAGACG  95 45
LK412_RS06940 1442748 .. 1442782 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        purL 1451158 .. 1451179 + -14.5  -5.55769   TGCGCTCCCTACGAA           CGGCCTTTC GCGA GAAAGGCCG            TTTTTTATTGTCCCG 100 50
LK412_RS06970 1459201 .. 1459235 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS06995 NONE
        dctP 1464818 .. 1464841 +    -8  -3.27475   CCAGCACGTACCGGT          GCCCGTGCAG GTTG CGGCACTGGC           TGTTGTGGTCGGGGA  55 406
        arfB 1466069 .. 1466106 +  -6.8  -3.53012   AACCAAGCGCCTGCG   CGGCAGGGTGCGCGAT GACTGA AGCGCGCGCCGGGCTG    TTTGCCCGCCGGCGC  58 4
LK412_RS07020 NONE
LK412_RS07025 1467557 .. 1467568 +  -7.2  -3.72576   CGCACACCGCGTAGC                CGCG CTCG CGCG                 TTTCCTGCAGCAGCA  64 326
LK412_RS07035 NONE
LK412_RS07040 1470660 .. 1470701 + -15.7  -2.52234   GCACGGCGCCGCCCA GCGCAATGCTGCCGGCGGC CAGC GCCGCCGCCATCCATGCGC  GTTCATGACGTTTGT  69 493
LK412_RS07060 NONE
LK412_RS07065 NONE
LK412_RS07070 1476320 .. 1476373 +  -5.2  -3.86897   GCCGTTCTGGTCACG GGCGCGCTGTGGCCCTGTCGT-CCAT CGCC ATGCTGCGCCAGGCCCACGCCG-GCC TTTATGCCGCGTGCC  60 390
LK412_RS07075 1476845 .. 1476896 +  -2.2  -4.59773   TCAGCCGCCAATACG GCGCGACAGCT-CGCGGGCGG-CCT CGACC AGGACCGGC-GCGTAGCCGTCCAGC TTTTTCAGCGTCACC  70 48
LK412_RS07100 1482487 .. 1482503 + -10.8  -3.13403   GGTGCAGGACATCAT              CGCGCC CGACC GGCGCG              TCTTCGTGGGCACCG  64 138
LK412_RS07110 NONE
LK412_RS07115 NONE
LK412_RS07120 1486721 .. 1486740 +  -3.4   -3.5764   CGTGTCGTGGAACAG            CCCGGACA TCAC TGCGCGGG             TTTCCCACTGGCGTT  51 510
LK412_RS07140 1490267 .. 1490281 +  -2.7  -3.14881   CGACAGGCGCGGCGC               GCGCC CGACC GGAGC               TTCGTGACCCGATTC  44 4
LK412_RS07145 NONE
LK412_RS07150 1494078 .. 1494112 + -16.5  -2.53995   CTGCCCCCCGTATGA    CGGG-GTGCCTGTCCC CGCG GGGACAGGCACACCAG     TCAGTTCAGCTGGAT  77 61
LK412_RS07160 1495742 .. 1495761 +  -4.8  -4.57073   GCGTAGAGTTGCTGC            GCGCGCGC ATGG GCGCGGCC             TTTTTCCACCAGATG  75 359
LK412_RS07170 1496888 .. 1496915 +  -9.1  -4.09864   CGCGCCAGGCGTTGC        GGTGCGCCGGCC ATTCC GGTCGGCG-GCC        TTTTCCACACTGCGT  75 173
        guaB 1501482 .. 1501519 + -22.2  -4.86731   ATCACGCAATGCATC   GCGCACCGG-CAGAACC GGCCA GGTTCTGGCCGGTGCGC   TTTTATTTCCAACCG 100 58
        guaA 1503172 .. 1503206 + -14.5  -5.46657   TGATTCCACATTTAA    TGCCATCGATGATTGC GACC GCG-TCATCGATGGCA     TTTTTTCTTGGCGTC 100 59
LK412_RS07195 1503732 .. 1503742 +  -6.8  -3.16564   AGTCCCGCAGGGTCT                 TCCG ACG CGGA                 TTGGTGACATGGGGC  52 8
LK412_RS07200 1505298 .. 1505348 +  -5.2  -3.75332   CTGGTAGGCGAGCAG GTCCATGGCCAGTCTGGCTTCG TTGGTGT CGGCGGCGAGCTGGCCCTGGGC TTTGGCTTGGCGAAT  58 232
LK412_RS07210 1507608 .. 1507630 +   -12  -3.58522   GCAAATCCGGGCTTG           CTGGCCGG GCTGTCG CCGGCCAG           TTTCGGCATCGTCAT  72 314
LK412_RS07220 NONE
LK412_RS07225 NONE
LK412_RS07230 NONE
LK412_RS07235 NONE
LK412_RS07240 NONE
LK412_RS07245 1515344 .. 1515376 +  -3.4  -2.92613   TATTGAGGGCCCTGC     GCAGCCTT-CCCGACA AGG TGGTGGGCGAGGC-GC     TGGTTTCGAATGACG  41 52
LK412_RS07250 1515971 .. 1515992 +  -2.8  -2.74999   GGCCAGTCGGCGGCC           GCCGCGCC CGGGAT GACGCGGA            TCCTGTTGCGGGTTG  40 252
LK412_RS07265 1520308 .. 1520330 + -10.4  -2.81464   AACGCAATAGGACGG           CGGCGCGGGC AGG GGCCGCGCAG           TATCATGGCTGGTCG  59 119
LK412_RS07270 1521469 .. 1521507 +  -8.6  -2.70932   CTAGGCCGCCGCAAG   GCGGGCGCAAGGCCTCGC GCG GCCAGTCCGTGCGCCACC   TGCTTGCCGGCAACC  52 37
LK412_RS07275 1522747 .. 1522761 +  -3.4  -3.35073   GGGGACGGACCTGGA               GGCGCG CAG CACGTC               TTCCTTGCCCATGAT  47 204
LK412_RS07285 1524885 .. 1524931 + -14.5  -3.36273   CGCTGCGCGCCAGCG CAACGCCGCGGCCGTCGATGGCG GCT TGC-AGC-ACGGCCGCGGAGTTG TTGATCTTCAGGCCG  80 298
LK412_RS07295 1526445 .. 1526473 +  -2.4  -2.57931   CAGGCCGTGGACCAG       GGGCA-G-GCATGC TGA GCGTGCGCGTGGCC       ATTGTCGGCGGTGGC  38 11
LK412_RS07300 NONE
LK412_RS07305 1528653 .. 1528670 +  -5.5  -2.63596   CGACCAAGACTGAGT             CCGCGCGT CTG GC-CGCGG             TCCTGTCCAATCACC  44 28
LK412_RS07310 1530318 .. 1530332 +  -9.2  -3.44146   GATGGCCTCGAGCAG               CGCCGT GCG GCGGCG               TTCGTTGTCGCGGCG  61 408
LK412_RS07320 NONE
LK412_RS07325 NONE
LK412_RS07330 1533756 .. 1533768 +  -6.2  -3.31726   GGGGGGGGGGGGCGC                GCCG GTCCG CGGC                TGTTCTATAACGGCC  53 427
LK412_RS07335 NONE
LK412_RS07340 1536332 .. 1536353 +  -2.9  -2.94099   CGAGAAAACCGGCGG           GGCGCGC-TG AAC CATGTGGGCC           TATCTCGTCAGGCGA  41 16
LK412_RS07345 NONE
LK412_RS07350 NONE
LK412_RS07355 1539760 .. 1539780 +    -6  -3.53012   CCGCGCGCGGGAGGC            GGCCGTGG CCTGA CAGCGGCC            TTTGCGGGGGGCGGC  56 13
LK412_RS07360 1540977 .. 1540990 +  -3.7  -3.16647   TGCCCTGGGCAGCCG               GCCCG ATTC CTGGC                ATTTTCATGCCTGGA  45 85
LK412_RS07365 NONE
LK412_RS07370 1541932 .. 1541968 + -18.8  -2.70932   GCCGCCTATGGCCTG   GCG-GGCG-CGCGCTTGC GGG GCGAGCGCGGCGCCGCGC   TCGTTGACGCCGGCC  87 44
LK412_RS07380 1543752 .. 1543766 +  -3.4  -3.57144   CGCGCTCGCGCAGCG               CCGCCG TCA CGCTGG               TTTCGGCCTGGAACC  51 498
LK412_RS07390 1545342 .. 1545352 +  -2.4  -2.80816   CGAGAACACCTCGAC                 CCTG GCG CCGG                 TGTGCTACCTGCAGG  40 310
LK412_RS07400 1545652 .. 1545667 +  -3.2  -4.00066   GCGACGCAATCGGCG              CGCTAT TGTT AAAGCG               TTTGTCAGTTGTCCA  58 98
LK412_RS07405 1546829 .. 1546863 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 439
LK412_RS07415 1548461 .. 1548498 +  -3.9  -3.56594   GGTGCCCATATAGTC   GGCGGCCGCGGCCTGGGG CAG CGGCGGGTTG-GGCCGGC   TTTGGGCGAATTTCA  51 491
LK412_RS07425 1550831 .. 1550844 +  -8.1  -3.28712   CGACCAGGTTGCCCA               GCACG ATGC CGTGC                TTGTGGCCCAGGCCC  55 237
LK412_RS07435 NONE
        rpmI 1552734 .. 1552752 +  -2.4   -2.8655   GAAAGCGATGATGCC             TTTCGCTT GAT AAGGGAGA             TCTACTATGCCTCGC  40 16
        rplT 1553143 .. 1553173 + -16.2  -4.09685   TACATCGCGGATCGC       TGCAAACGGGGCTG TAA TGGCCCCGTTTGCG       TTTTGAAGGCTCAAA  95 50
        pheS NONE
        pheT NONE
LK412_RS07460 1556984 .. 1556997 +  -2.3  -3.88137   CCGGACCCCGCCTCT               GCGGA GTGA TACGC                TTTGTCGGCAATTGT  54 17
LK412_RS07465 1557497 .. 1557526 + -15.8  -4.41047   TACGGCAGGCCGCGA       CGCCGCCTGGTTC TTCGC GAACC-GGCGGCG       TTTTCCTTGGGCGCT 100 61
LK412_RS07470 1557718 .. 1557752 +   -26  -3.45027   CCCGACCAGTAGTTC     CAAGGCCGTCAGTGAT CAC ATCACTGACGGCCTTG     TCTTTCGTGGGGACT 100 33
LK412_RS07480 1559834 .. 1559867 + -15.9  -3.14564   AACTGGAGCTGTAGT     CCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGC      TTCCTCGGCCCGTGC  78 27
LK412_RS07490 1561413 .. 1561436 +  -8.8  -2.58892   TGCCGGGGCGGGGCT          GTGCCGCC ATGCGCGA GGCGGCGC           TCAATTGATCTGCCT  52 263
LK412_RS07495 1561773 .. 1561796 + -14.6   -5.0925   CAACCAGATCAAAAA          GGCTTGGCGA TTCA TCGCCAGGCC           TTTTTCGTTTTCGCA 100 35
LK412_RS07500 1562580 .. 1562625 + -12.7  -3.05844   ATGTAGAACTGGATG CGCG-CG-ATACGGCCGCGCA CGTACT TGCGCGGCTGTATGCGGCGGG TCTTGAAGTCCACGA  66 360
LK412_RS07510 1563468 .. 1563498 + -10.4  -4.86621   GCCGCACCGTGCGCA      GCCGCC-TGCCGC GATAGG GCGCCAAGGCGGC       TTTTTCATTGGGCGT 100 59
LK412_RS07515 NONE
LK412_RS07520 1564473 .. 1564489 +  -7.3  -3.20348   TTTGGGGTCGAATAA              TATGCGC ATT GCGTATA              TTCCGTATTCCTCCC  52 89
LK412_RS07525 1565802 .. 1565860 +  -7.9  -4.07568   TTCCGTCTTCCACGG CCTGGACTGA-GCCGTATCGCGTGGCGC GCCA GCGCCACGCGAGCCCGCGTCAGACGCGC TTTTCCCCGCCCAGC  69 16
LK412_RS07535 1567475 .. 1567495 +  -6.8  -3.40403   GCGGGCGGGCTGGTT           TCGC-CGCC CACC GGCGCGCGG            TTGTAGTGAAAGGGC  55 180
LK412_RS07550 NONE
LK412_RS07555 NONE
LK412_RS07560 NONE
LK412_RS07565 NONE
LK412_RS07570 1573614 .. 1573624 +  -3.2  -3.05384   ATTGCCCTGTGGCGC                 TCGA CGG TCGG                 TTGAGTCCGCAGGGG  42 11
LK412_RS07575 NONE
LK412_RS07580 NONE
LK412_RS07585 1577409 .. 1577423 +    -7  -5.15969   CTATGCGGGCTTGCT               GCCCCC CGA GGAGGC               TTTTTTGCCTTGGGG  93 161
        recA NONE
        recX 1583468 .. 1583514 +  -9.3  -3.33815   CGACTGAACGATGCC GCTTCGTGCGGGCGGCGGCGCGC GAT GCGGGC--CCGCCTGCCTGGGGC TTGCTTGCGGCCCGT  61 34
        metE 1587047 .. 1587067 +  -6.7  -3.40403   GGTCGGCCCGGGCCG            CGTCGCCGG CAA TCGGCTGCG            TTATACTCCCCAGGA  56 153
LK412_RS07625 NONE
        sucC NONE
        sucD 1589830 .. 1589849 + -16.4  -5.78622   CCGCCTGTCCCAGGA            CGGCCCGC GATC GCGGGCCG             TTTTTTTTCGCATGC 100 57
LK412_RS07640 1590791 .. 1590833 + -23.5  -5.07652   GCTGAACTACAATAG CGGGCTGTTCGGGCCCCGCC TTCA GGCGGGG-CTGACCAGCCCG TTTTCTTTTGGCCGC 100 47
LK412_RS07645 NONE
LK412_RS19890 NONE
        hemC 1592723 .. 1592736 +  -5.9  -3.15999   TGACAGGGCGGTCGG               GCCCT CGCG GGGGC                TTGCCTATGTCGCAG  51 38
LK412_RS07655 NONE
LK412_RS07660 NONE
LK412_RS07665 1596335 .. 1596352 +  -2.6  -4.23781   TCCGCCGGCCCGGCG             TCCGGC GACAAA GCCTGA              TTTCATTTTCATCAA  62 8
         ppa 1596945 .. 1596986 + -23.8   -4.2231   GCCTGGGGCGGCCGG CGGCGCGGAAGCGA-CGGC AGGCA GCCGCTCGCATCCGCGCCG TTTTGCGTCATGCTT 100 53
LK412_RS07675 NONE
LK412_RS07680 1597990 .. 1598009 + -12.8  -5.07652   GCCGGCATGATGCAA            GCCCTCGG TCAT CCGGGGGC             TTTTCTTTTGCCGCG 100 50
LK412_RS07685 NONE
LK412_RS07690 1599728 .. 1599746 +  -6.6  -3.28712   GCGGCCCGGAAAGCC             GGCCATGA GGG TCGCGGCC             TTCTCCCGCAGGCAA  53 18
LK412_RS07695 NONE
        cpaB NONE
LK412_RS07705 NONE
LK412_RS07710 1605671 .. 1605684 +  -8.1  -3.53012   GCTGATCCGCCGCAT               CGTCG CCAT CGACG                TTTGAGGAGCCGGGC  60 7
LK412_RS07715 1606050 .. 1606060 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
LK412_RS07720 NONE
LK412_RS07725 NONE
        folD 1609061 .. 1609075 +  -3.4  -3.75933   CGTGCGATCGGAGAA               ATCGCC GCC GGCGGA               TTTGCTCGCGTCTAT  55 187
LK412_RS07750 NONE
LK412_RS07755 NONE
LK412_RS07760 1616802 .. 1616812 +  -6.8  -3.07816   CGTCGATATCGAACG                 GGAG CGT CTCC                 TTGGATAACTCGCAC  51 7
LK412_RS07765 NONE
        purU NONE
LK412_RS07775 NONE
LK412_RS07780 NONE
LK412_RS07785 1621584 .. 1621605 + -14.5   -5.1287   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 53
        murB 1622981 .. 1623003 +  -9.8  -3.40403   CTTACAGGCCCAGTA           CGGCCTGCAT GTC GTACAGGCCG           TTGTCCTGGCGCGCC  65 76
         fur 1624918 .. 1624939 + -15.9  -6.10489   GCTCTACCAACCCTG           CCTCCAGGC GCAA GCCTGGAGG            TTTTTTTTTGCGGTT 100 48
        hrcA 1628702 .. 1628719 +  -5.5  -3.54382   GCCTGCGCGCGGGGC             GGCGCCT TGAG AGGTGTC              TTCGTGTTTCTTCGC  54 62
        hemH 1629836 .. 1629853 +  -8.3  -2.52676   CTGTGGTTGAAGCGG             CGGGCGC GAGC GCGCCGG              TCCATTCCGCGAATG  51 50
LK412_RS07835 1630164 .. 1630189 +  -3.8  -5.52384   GGGCGGCGACGCGCC         GTCCGGCGGC GTCATG GGAGCCGGGC          TTTTTTTCCTGGAAA  90 54
        grpE 1630809 .. 1630853 +  -5.6  -3.05384   GTCCGGCGCTGGTCG TGGTGTCCGCCGGCCAGGGCTG AAG CAGGCATGGCCGCCGC-C-CCA TTCGATCCCGCCGAG  47 3
LK412_RS07845 1631249 .. 1631267 +    -3  -2.78725   AACTCCAGTTACTGG             GGGACTGA GTT TCAAACCC             TGATTCCTACCGTAT  40 55
        dnaK 1633252 .. 1633294 + -18.5  -3.27298   GGCCGAACGATGACG TGCGATACGCCCGGTAGCTG ATTC CAGCTACCGGGCGCG-CGCG TTGATGATTCAGAAC  93 42
        dnaJ 1634537 .. 1634566 + -22.3  -2.88249   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 93
LK412_RS07865 NONE
LK412_RS07870 1638837 .. 1638868 +  -7.9  -3.85864   TGGGCCAGGCGTCGA      GCA-GCCGGCGCAG CCAGA CCGCGCCGGCCTCC      TTGTTGTAGTGCTCG  67 187
LK412_RS07890 NONE
LK412_RS07895 1642707 .. 1642735 + -16.7  -4.38712   CCAGTAAGCGGCGCC        GGGCAAGCCCCCG ATC CGGGGGCTTTTCC        TTTTCTAGCGCTCGG 100 34
         icd 1644659 .. 1644683 + -11.4  -5.02074   GCATCAGCCGAGAAA         CCCGC-GCCCC TATG GGGGTAGCGGG          TTTTTTGCCGAATGG 100 60
LK412_RS07910 1645861 .. 1645878 +  -3.3  -2.74864   TGTGGGATTCCGTTT             CGGGTTG AGGC CGGTCCG              GTATTTGCTTCTACA  40 83
LK412_RS07915 1647229 .. 1647239 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS07920 1648611 .. 1648633 +  -7.6  -3.17212   CGCGCAGGCGCGCCA           GCAGTTCGCC GAC GCCGAACGGC           TTGGTCAGGTAGTCG  53 393
LK412_RS07955 NONE
LK412_RS07960 1659640 .. 1659674 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS07985 NONE
        lolA 1665581 .. 1665601 +  -3.3  -3.05596   CCTGCGGGCCAAGGC           CGCCGCAT GGTGTA ATGCG-CG            TTGGATCCGCCCGTG  42 74
LK412_RS07995 NONE
        serS 1668405 .. 1668422 + -11.3  -4.98531   CACGTGAACCAGAAA             CGGAACC CGCG GGTTCCG              TTTTTCATTTCGGCG 100 54
LK412_RS08020 1670453 .. 1670466 +  -9.5  -3.28791   GCCAGGAAGGCTGAC               CGGCC CGCG GGCCG                TTATGCGCCAGCCGT  61 27
LK412_RS08030 1672094 .. 1672115 +  -7.3  -2.78463   GGGAAGAACACCATC           TCGCGCGCCA TGC TGG-GCGTGA           TCTGCTGCAGCGCCT  49 352
LK412_RS08085 1685229 .. 1685277 +  -6.6  -2.70932   CCGCCGCGGACAACG AGGAGCGG-TCCG-GCCCGGGC TGACCGC GCCCGGTCACGGATCCGTGCCA TCATTGCCGGCGGCG  47 3
LK412_RS08090 1686157 .. 1686167 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS08095 NONE
        yaaA 1687972 .. 1688009 +  -3.4  -4.21812   CGCAAGCAGGCCTGA  CAGGACG-CGCG-ATGTC GGCA GGCTTACGCGTCTTCCTG   TTCTTTTCGCTCGGC  63 26
LK412_RS08105 1689693 .. 1689707 +    -7  -3.72576   CGGCGTCGGCGCGCT               CGCCGG TCT CGGGCG               TTTCCTCGCCCGCCG  64 494
LK412_RS08115 NONE
LK412_RS08120 1693251 .. 1693285 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS08130 1694891 .. 1694923 +  -4.6  -4.24342   TTTCTCGCTCAGGTA      CAGGGCCAGCGCGA GGTCG TCGGCCAGGCCCAG      TTTCTTCATGGCGCG  66 459
        thrS NONE
        infC 1698539 .. 1698575 + -19.3  -3.05463   CAGGCTGATCCCATC    CCCGGCCCGGTTGCCCT CGA GGGGCGTCCGGGCCGGC    TTGCGTGCGGCCCGT 100 33
        gshB 1699631 .. 1699644 +  -3.1  -2.87243   GCCGGCTGAACTTGC               TGCTA TGAC TGGCA                TCGTTATCGTCGTGC  41 32
LK412_RS08160 NONE
LK412_RS08165 1700435 .. 1700461 + -10.8  -2.62735   AAAACCTCAGGTTCC         GGCAGCCCGC CGTCGGC GCGGGCTGCA         TCGTCTACGCGCTCT  59 42
        ptsP 1702256 .. 1702273 + -10.5  -5.64006   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT 100 47
LK412_RS08175 1702576 .. 1702614 + -10.2  -2.83641   CGGCTTGCGCCAGCC  ACG-CGCGCTGGCGCCCG GCCTG CGGGCGCC-GCGGGGCGA  TGTCGTCATCCCTTG  59 44
LK412_RS08185 NONE
LK412_RS08190 1705421 .. 1705439 +   -16  -5.31275   GGGCGCGGCAATGCG             GGCAGGCC TTG GGCCTGCC             TTTTTTGTCGTCAAA 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
LK412_RS08210 1708579 .. 1708589 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS08215 1709833 .. 1709873 +  -5.9  -3.29144   CGGGGCGGCCCTCGG  GATGCCGCGGGAGGTCATC CGT GATGTCGTGCCACGGCGCC  TTGTGGGCGACGTAG  53 265
LK412_RS08250 1715767 .. 1715782 +  -7.5  -2.71011   GCGGAACAGGGACCG              GCGCG CCGTCC CGCGC               TGATTGCGAAGGGAT  51 7
         fba 1717033 .. 1717052 +   -15  -5.15634   CGCCCGCATGGAAAA            CCGGACGC GCGA GCGTCCGG             TTTTTTCATGGCCTC 100 72
LK412_RS08265 1718644 .. 1718670 + -17.3  -5.26875   GCCGGCGCCGTCCAG        GCCCGC-CGCCC TTCG GGGCGCGCGGGC         TTTTTTCATTGGAGG 100 46
LK412_RS08270 NONE
LK412_RS08275 NONE
LK412_RS08280 1719579 .. 1719597 +  -4.4  -2.77523   CCGTGCCCTTGCCGC             TGGCGCTC TGA GTCCGCCA             TGATCTTCCTGCGCA  43 15
LK412_RS08285 1720180 .. 1720197 +  -9.1  -3.41836   AAAATAGCCGATTCG             CGGC-CGC CTG GCGGGCCG             TCTTTCCATCCCTAT  63 129
        purE NONE
LK412_RS08295 1721923 .. 1721937 +  -3.4  -2.60075   GCGCTGGGCATGGCC               GCGCCG CTC TGACGC               ATTGATTCCCGCCGC  39 14
LK412_RS08300 1723022 .. 1723038 +  -7.2  -2.62184   AACTCCTGATTGCCG              CGCCTG CCGGC CGGGCG              TAATCTCACGCGGAC  47 56
LK412_RS08305 1724162 .. 1724199 + -10.5  -3.06162   CTAGGGCGAGGGCGG   CGGGGCGGGCAAGATCGC CAA GCGATAC-GCCTGTCCCG   TATTGCGGTACGCTA  60 37
LK412_RS08310 1725103 .. 1725121 +  -5.9  -3.62518   GTATTTGATGGGAGA             GCAAGGG GAATA CCCTAGC             TTTCCGGATCTTTCG  59 50
LK412_RS08315 NONE
LK412_RS08320 NONE
LK412_RS08325 NONE
LK412_RS08330 1728491 .. 1728514 + -19.6  -2.75064   TGGGTTGAGCCCGGC          CTGCCGCGCG CGCC CGCGCGGCAG           TGGTTCCATGGCCGG  93 33
LK412_RS08335 1730201 .. 1730231 +    -9  -3.89956   CCGGCACGCCGGGCG      CGATGCCGC-CGCG CAACA CGCGGGCGGCG-CG      TTTGGTCTATCCTGC  73 55
LK412_RS08340 1730845 .. 1730884 + -12.1  -3.73072   GCACGCGGGGAAGTT  TGCCG-GTGCCAGTCCCC CTTGC GGGGACAGGCACGCGGGG  TTTAGTAGAAGGCTT  77 122
LK412_RS08355 NONE
        xerD NONE
        ybaK 1736445 .. 1736467 +  -9.1  -2.94144   TCGTCGCATGACCAG          GCCGGCGCGT TACG GCG-GCCGGC           TCCTTTCCATGGAGA  56 100
LK412_RS08370 1737075 .. 1737103 +  -5.2  -2.59564   GCACTGACCCCAATA       CGGGCTGTACGGCC GCC GGCCG-GC-GCGCG       CTTGTCGCCTGCCGG  44 34
LK412_RS08375 1737575 .. 1737585 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS08380 1739049 .. 1739067 +    -3  -4.07885   CGGATAGTTGCGGCC             CAGCGC GTGGGCG GCGCGG             TTTTCCGAGGACATC  58 485
LK412_RS08395 1741579 .. 1741606 +  -4.6  -3.53444   GCCGCTGGCGCAGCC        CGCCGCGGCGCG CGCC TGAGCCACGGAG         TTTCCGCAACCGTAC  52 7
LK412_RS08400 1741759 .. 1741773 +  -9.2  -3.28712   AACTGGGAAAACATC               GCCGCG CTG TGCGGC               TTCTAGGCCGCGCGC  61 5
LK412_RS08405 NONE
LK412_RS08410 1748374 .. 1748432 + -24.1  -2.71731   TGATGGGTCCGGTCG -G-GCCGGGGCTCGCCAGCTACGCATTCT GTT AGAATGCGTAGCTGGCGGGCCCCTTCGCA TGGTTCGGCGGTGAA 100 521
         ffs 1748543 .. 1748578 + -10.7  -2.70932   AGGGGCGCCGTGACC   GGAATGTATCGCGATCC AGGC GGATCGC-AT-CATTCC    TGGTTGCGGCGCCCC  60 54
LK412_RS08420 NONE
LK412_RS08425 1751147 .. 1751181 + -13.5   -2.6927   GCTGCCGTTCTGATA    TCGC-CTTGGCGGCCC AGCC GGGCCGCCGGGCGCGC     TGCTGTCTGCGCGAT  67 28
        recR 1751838 .. 1751848 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS08435 1753041 .. 1753070 +  -2.7  -4.13767   CGCCGTCCTCGAGTA       TGACC-AGGCGGGC GTT GCGCGCATCGGCCA       TTTTCACATCCGACA  61 214
LK412_RS08455 1756089 .. 1756123 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS08490 1763757 .. 1763809 +   -11  -3.28791   CGCGCAGGCATGCTG CGCCGCGCGGCCATCCGGCGGGGCC GCAA GGCGCCGCCGGGCA-CCGCCCGATG TTATCCCCGGCAAAT  66 298
        mutS NONE
LK412_RS08505 1768686 .. 1768707 + -15.9   -4.4078   GGGCAGGCATGCTAA           TGGCCTCCG GTAA CGGAGGCCA            TTTTCATTGCGCGAA 100 520
LK412_RS08510 1769488 .. 1769511 + -18.2  -5.40474   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 50
LK412_RS08530 NONE
        glnH NONE
        glnP NONE
        glnQ 1775966 .. 1775987 +  -8.8  -3.05844   GTGGAAACCGCGTCG           TCGTGCAT CGTGAC ATGCACGA            TATTGGCGTCGGCCG  55 165
LK412_RS08575 1781788 .. 1781799 +  -4.4  -3.35679   GTTCGTGGGACGCGG                CTGA GGTT TCAG                 TTCTCGCTGGCGGCC  51 22
LK412_RS08585 1784546 .. 1784556 +  -3.2  -3.89614   TTACGCTCGGCTTTG                 GTCA GAT TGGC                 TTTGTCGCCCTTGGC  58 441
         rph 1787309 .. 1787335 + -12.2  -3.05384   GCGCAGCGCCGCCAC         CTCGGCGTCGCC CGG GGCGGCGTCGAA         TTCGGTGAGGCCGGC  66 492
LK412_RS08615 1789586 .. 1789602 +  -6.5   -4.8083   AACTTGCGGCCGCGC              TGTCGGC CAC GCTGGCA              TTTTTCGTGCTGTTG  82 139
        rdgB 1793729 .. 1793739 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS08635 NONE
        hemW 1796093 .. 1796115 +  -7.6  -4.16842   CCAGGAGTGCGGGAC           CTGGCACGCA TTT TGCTTGCCTG           TTTATTGCCAGTCGG  74 133
        glnA 1797585 .. 1797637 + -22.1  -3.11634   ACTACAGCCTGTAAT CCGGGAGGCTGTGCGGCG-GCGGGCC TCGC GGCCCGCCCGCCGCGC--CGTCCCGG TTGCCTCCTATGACG 100 27
        glnL NONE
        ntrC NONE
LK412_RS08665 1802021 .. 1802043 + -11.9  -4.56597   TGCCGTAAAGTGAGA           CGGGCGCCG CCAGC CGGCGCCCA           TTTTTCCACGGCGCG 100 33
LK412_RS08670 1803185 .. 1803219 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 214
LK412_RS08695 1808828 .. 1808841 +  -9.5  -5.27335   CGCCGCCAGGAAAAG               CCGCC TTCG GGCGG                TTTTTCTTTGGCCGC 100 48
        dkgB 1812322 .. 1812339 +  -2.6  -3.65351   GAGGGGTGGGCGTAT             TGCTGG ACAAGA CCGGCG              TTTCGCTGACGCTGG  51 478
LK412_RS08720 NONE
        recG NONE
LK412_RS08730 1818093 .. 1818119 +  -9.4  -3.14132   GGCCGGCGTGGCGAA        GCCC-GGCCGG AAATGC TCGGCCAGGGC         TTGCTCGACCACGCG  59 58
LK412_RS08740 1820631 .. 1820660 + -18.6  -2.67316   GTTCGGGCTGAGCGC       GCGCCGGCGCGGC CGGGC GCCGCGCCGG-GC       TGCCTTGTTGCGTTC  87 30
LK412_RS08745 1821247 .. 1821268 + -15.9   -5.4505   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 47
LK412_RS08770 NONE
LK412_RS08775 NONE
LK412_RS08780 NONE
LK412_RS08785 NONE
LK412_RS08790 NONE
LK412_RS08795 NONE
        tviB NONE
LK412_RS08805 1836571 .. 1836621 +  -2.7  -3.07816   GCCGCCATGCCCTGG TACACGCAATTCCTG-CG-ATGA TCGAGCT TCATTCGTCAGGCATCGCGCGTA TTCCGTACCTGACGG  42 5
LK412_RS08810 1838656 .. 1838674 +  -5.2  -3.13403   GATGAGCCGGAGCAT             GGCATGAG CGC CTCGTTCC             TGTTCCTGCAGGGCG  49 36
LK412_RS08815 1839852 .. 1839862 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
LK412_RS08820 NONE
LK412_RS08825 NONE
LK412_RS08830 1843413 .. 1843447 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS08840 1845751 .. 1845767 + -10.1  -3.01712   CGCGCTGCTTGGCGA              TCAGCGC CTT GCGCTGG              TCTTCGGGCAGGGCG  59 231
LK412_RS08890 NONE
LK412_RS08895 1856801 .. 1856837 + -11.4  -3.01712   TATGCGCCCGATGCC    GTCGTGCGGGCGCTGG ACGCG CCGGCGCTGGCGCGCC    TGTTCGCGGCCAGCG  65 427
LK412_RS08905 NONE
LK412_RS08910 NONE
LK412_RS08915 NONE
LK412_RS08920 NONE
LK412_RS08925 1863450 .. 1863476 + -22.3  -3.05384   GGCAAGTAGGCGCGG         GCGGGCGCGGG CGGGC CCCGCGCCCGC         TTGCGTCGCGCACGC 100 32
LK412_RS08940 1866164 .. 1866211 +  -5.4  -2.73468   ACGGCGATGACCGCG TGCGCGGGCTC-CAGCCGGGT GCTCACG GTCAGGCGGCGCGCTCGCGCA TGCTTGAGGATATTG  43 191
       sphB2 1871979 .. 1871999 +  -8.2  -3.34895   CGATGGCGGCATCTT            GCCTTGGC GAATG GCCACGGC            TTGCTTCAGGCTGGC  59 267
LK412_RS08975 1874105 .. 1874143 + -10.1  -3.65351   GAACCGGTCTGAGCG  CCGGGGCGGCGGCG-CCC GCAT GGACCGCCGCCGTCGCGA   TTTCCATGACGGTGC  67 29
LK412_RS09005 NONE
LK412_RS09010 1880801 .. 1880818 +  -6.3  -2.62184   GCGCCGTGCTCGACA             TCAACGGC GGC GCCG-TGA             TGCTCTGACACGCCA  46 0
LK412_RS09015 1882228 .. 1882242 + -12.8  -4.15044   GTCGCACTGCGCCAG               CCGGGC GTA GCCCGG               TTTCTTCAGGCGCGC  86 383
LK412_RS09025 1884172 .. 1884187 +  -5.4  -3.67597   CAGTCGGTGCCGGCC              GG-CCTG CCG CAGGGCC              TTGTTCCCTGGGAGC  57 286
LK412_RS09035 1885907 .. 1885941 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS09045 1887003 .. 1887026 +  -8.8  -3.35992   GCGGGCTTGCGCCGT          G-CGCCGCGAC AGC GTCTCGGCGGC          TTCCTTGCGCTCGCT  60 43
LK412_RS09075 NONE
LK412_RS09080 1893469 .. 1893481 +  -4.8  -3.01712   CAGTACGATATCGTG                CTGG CGCGC CCAG                TCTTCCACCCCCGCG  46 363
LK412_RS09090 1894491 .. 1894501 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS09095 1895978 .. 1896033 + -11.7  -4.07568   CCAGCGTATAGCCGT CCGGGGTGGCCTTGGCCAGCGCG-TCG GCGC CGATCGCGCCG-CCGCCGCCGCCGCGG TTTTCCACCACGACC  82 498
LK412_RS09105 1899590 .. 1899603 +  -2.3  -3.01918   CGCAAACCGGGAGTC               CTGCC TGAT GGAAG                TCGTTTATGCCCTGG  41 18
LK412_RS09110 NONE
LK412_RS09115 NONE
LK412_RS09120 NONE
LK412_RS09125 NONE
        mnhG 1902738 .. 1902748 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 117
LK412_RS09135 1903785 .. 1903810 +  -8.2  -2.70932   TATGGTAGAAAGGTC         AGCGGCAGGCC ATGAC GGCC-GCCGCC         TACTTCAAGGAGCGA  52 58
LK412_RS09140 1904403 .. 1904418 +  -4.6  -2.84454   CGCATTCAGGCAAAA              TGTCGG CTGT CCGACC               CTTTAAGTCCTTTAT  44 90
LK412_RS09145 NONE
        tadA NONE
LK412_RS09155 1906783 .. 1906829 +    -7  -4.56597   AGCACACCCACTGAA CGCAGGCCCCGCTACGTGTCCT GCC GGGGCACCCAGGCGGGCTGGCG TTTTTCCAGGAAAGA  77 27
LK412_RS09180 1913395 .. 1913438 + -12.2  -3.28924   GGCATCGAGGCGTAA GCGGGGCGCCCGC-GCGCGGC CTG GCCGCGCCGCCCGCGGCATGC TTATAACGACAGGTA  71 26
LK412_RS09185 1914358 .. 1914381 + -17.4  -2.61695   TCATACCGATACCGT          GTCGCGGGCC CGCC GGCCCGCGGC           CTATTTGCCGATCCC  80 57
LK412_RS09190 NONE
LK412_RS09195 1916184 .. 1916206 + -11.9  -3.15544   AATACGTCTGAACCA           CGCGCGGGC CTGGC GCCCGCGCC           TTCATCGCCATGACC  66 30
LK412_RS09205 1918128 .. 1918150 +  -6.2  -2.78463   AGGGGGCATCCGGCG           CGCCGCCA CGTACAA TGGCGCCG           TATGATGCACACGCT  47 39
LK412_RS09210 1918718 .. 1918763 + -11.7  -3.04144   CACCCGCGGGCGCGG CGACTG-GGACGTGCAGGCCTG AGC CAGGCCCGCGCGGCCTCAGGCC TGTTCGCCCTCGCCG  65 4
        tsaD 1923146 .. 1923164 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 204
        surE NONE
LK412_RS09250 NONE
LK412_RS09255 NONE
LK412_RS09260 1928369 .. 1928411 + -10.7  -3.54424   CCGGGTGCGAAACCC GGTTGAAACCGCGTCGCC CGCACAAT GGCAGCGC-GTTTCAACC TTTCAGGAGATCACC  70 72
LK412_RS09265 1929050 .. 1929077 + -15.5  -3.75153   GATCCGCAGGAATGA        CGCCCCGGGGC TGCAAC GCCCCGGGACG         TTTGCGTTGGCGCGC  85 49
LK412_RS09270 1930070 .. 1930123 + -14.8  -3.55444   GCGGACCTTCTGAGG CG-CTG-CCG-G-GGACGTCCCGTCC GGTGGG GGACGGGGCGTCCGCTCGGACAGCCG TTTCCGGCATGGCCC  81 28
        rlmD 1931594 .. 1931625 +   -18  -3.25169   CTGCCTGAGGCGGCC      CGCCGGGCGGCG GCGTTCAG CGCCGCCCGGTG       TTGCTCAGTTCTTCG  89 33
LK412_RS09285 1932407 .. 1932460 +  -4.3  -3.52877   TTAGCGATCGATTGC TTGAGA-CTATCAATTAATTAGATTT ATT AAATTTTATTAATTGATAGCTAACAA TTATCATCTCTTCAT  52 48
LK412_RS09290 1933258 .. 1933281 +   -21  -4.32201   CTGGCCTGATGCCTG          GCCGGCGGCG CTGC CGCCGCCGGC           TTTTCCCTTCCTTCG 100 32
LK412_RS09295 1934945 .. 1934965 +  -8.1  -3.53811   GCCGCTGCCGTGCAG            CCCGAAGCC GTC GGCGGCGGG            TTTGCGCACGGTCAG  60 170
LK412_RS09310 1938718 .. 1938764 + -20.3  -4.87626   TCGGCCTGGAACATG GCCCGGTTGGTGGCGATTCCTT CCAT GAGGAA-CGGCACCAGCCGGGC TTTTTCCTGTTCGGC 100 116
LK412_RS09320 1939988 .. 1939998 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS09325 1941245 .. 1941286 +  -7.9  -3.89354   GCTGCTTGATCCGCC TCG-GTGGCGGTGCCGACCG TGC CGGTCAGCGTCACCACGCCA TTGTTCGTTTCGACC  67 268
LK412_RS09360 1950463 .. 1950498 +   -19  -3.14132   CCGGGTGCCCGAGTG    CCCGGGTGCCTGTCCC AGCG GGGACAGGCACCAGGA     TTCCTGCGGGGACAG  90 50
LK412_RS09370 1952546 .. 1952567 +  -2.1  -2.87132   AACTGCGGGCCTTGT           TGCAGGCGT AACG GCGCGGGCA            TGTCTGCGGGCGGCC  40 15
LK412_RS09375 1953837 .. 1953865 + -10.1  -2.77994   TAGCGCCGGCCGGGT        TCGGCGCGCCGCC GAG GGCGGCGCGGAAA        TGGTTGCAATTTCTG  57 38
LK412_RS09380 1954440 .. 1954450 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 72
LK412_RS09385 1955919 .. 1955934 +  -6.2  -4.83722   GTCTATGGCATCAAG              TTGCAT GGTT ATGCAA               TTTTATTCTGCTGTT  86 490
LK412_RS09395 1957342 .. 1957357 +  -8.2   -3.4247   TCCAGCGCCGGCGCG              CCGCCG CCTT CGGTGG               TCTTCTTCAGCTTCT  61 343
        purN 1964753 .. 1964763 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS09425 1965802 .. 1965812 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS09430 1967223 .. 1967233 +  -2.4  -4.06419   CAGGGTGTCAGCATA                 CAGG TAG CCGG                 TTCTTTGTAGCAAAA  58 432
LK412_RS09440 NONE
LK412_RS09445 1970948 .. 1971002 + -15.8  -2.61383   GCTGGACATCATCAC GGCCTGAGCTTCGCGTCTTGCGCCCGC ATCG GCTGGCGCAAGACGCG--GCA-GGGCC ATTCTCAATAGCGGT  74 19
LK412_RS09480 1980381 .. 1980400 +  -7.1  -3.42354   AAGGTGTATTGGCCG            CTGGCCT TGGCCT GGGCCAG             TTCTGCCTTGACCTG  58 290
         phg 1982323 .. 1982344 + -14.4   -2.6155   CCGGGCCGCGCCGCG           GGGCCGCC TATAAT GGCGGCCC            GTTGGTCTTCCCAGG  69 45
LK412_RS09495 1982655 .. 1982681 +  -7.9  -5.06816   GGCGCCATCTGACGC        ACTGAGCGCGCC ATCG GGCGCGC-CGGC         TTTTTCTTGGACAAT  88 21
LK412_RS09500 1983242 .. 1983253 +  -2.2  -4.05004   AGTGCCGTGCCTTCT                C-CGG CGT CCGCG                TTATTGTTCTACTGC  58 246
LK412_RS09505 1983554 .. 1983569 + -11.8  -4.93547   AGCGCGTCCATAAAA              GCCCCC GCCA GGGGGC               TTTTTCATTGCTTGG 100 48
LK412_RS09510 1984417 .. 1984427 +  -3.2  -3.77808   GCGAGATCTTCAAGC                 GACG CGG TGTC                 TTGTGTTCTGGTCGC  56 261
LK412_RS09515 1984794 .. 1984819 + -16.9  -5.06414   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 92
         tig NONE
        clpP 1987615 .. 1987641 + -14.4  -3.01924   TCGATAAGCGTTGAT         CGCGCCGGCC CTCATCC GGCTGGCGCG         TCTTCACCAGAGATA  72 78
        clpX 1988992 .. 1989026 + -19.6  -3.05819   GATCCCGGCCGCCAT     TGCAAGAAAACCCGTT TGT AACGGGTTTTTTTGCA     TCTTCCCGCTATCTG 100 46
         lon 1991647 .. 1991671 + -22.9  -5.45726   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTCGGCTATC 100 59
LK412_RS09550 1994151 .. 1994167 +  -7.2  -4.21827   TGAGCCCGCGCGCCA              TCGCCG CGATC CGGCGG              TTTTCCCGTGTTTCA  72 38
LK412_RS09555 1995208 .. 1995220 +  -6.2  -3.53012   CTTCGATTCCATCGC                GGCC CTCAA GGCC                TTTGCCGGACAGCCG  56 58
LK412_RS09560 1995619 .. 1995632 +  -2.3   -2.6563   GGCGATGGTGGCCGA               GTGGC TGAT GCAAC                TGCGTTATTGAGCGC  38 1
LK412_RS09565 NONE
LK412_RS09570 NONE
LK412_RS09575 NONE
LK412_RS09580 1998940 .. 1998967 + -11.3   -3.1876   TCAAGGCCGAATTGC       CGC-CGCTGCCGG CCGA CCGGC-GCGCGCG        TTCGTGGATGGGCTT  64 125
LK412_RS09590 2000592 .. 2000603 +  -5.8  -2.72344   GCGCTGCTGACGGGC                GCGA TGAC TCGC                 TGCTTCGAGATGAGC  45 31
LK412_RS09595 NONE
LK412_RS09600 NONE
LK412_RS09605 2002505 .. 2002525 +  -3.1  -3.90744   CCTACCCGCCGGGCG            GCGCCGTCG ATC CCATCGCGC            TTCTTTACGCCGAGA  58 175
LK412_RS09620 2005239 .. 2005268 +    -2  -3.64703   CGCACGCGCAGCCGC       TGCCGCCCGCCGG CAACC CCGGCGC-TGGGA       TTTACATGCCCCGCA  51 392
        uvrB 2010547 .. 2010561 +  -3.5  -2.70932   GAAAGACGGAAATTA               GCGGA GAAAA TTCGC               TCGTTACAAACAGGC  41 47
LK412_RS09645 2011340 .. 2011355 + -11.8  -5.00616   CCCAAAATGAGAAAA              CCGCGC GACT GCGCGG               TTTTTTCCGACCGAG 100 96
        iscR NONE
LK412_RS09655 NONE
        iscU NONE
        iscA NONE
        hscB 2014570 .. 2014590 +  -2.4  -3.32844   GGCGGCCGGCCCGAT            GCGCGGCA ACCGA TGACCCGC            TTGTGCGGTGCCGCG  44 81
        hscA NONE
         fdx NONE
        iscX 2017074 .. 2017108 + -24.4  -3.53012   GCCGGCGCGCCGCCC     GGACAAGGGCCCCGTC ATG GACGGGGCCCTTGTCG     TTTCGGGGCCGCGCG 100 48
LK412_RS09690 2018235 .. 2018269 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS09705 2021142 .. 2021161 + -12.1  -5.60993   TGCGTTTGGCTTGAG            CCCCGCG AACCCC CGCGGGG             TTTTTTTATGGCCCG 100 66
LK412_RS19905 NONE
LK412_RS09715 2023931 .. 2023954 +  -9.4  -3.15249   CGCTACGTCACCACG          GCCTGCGCGC TGGC GCGCGACGGC           TTGATCGACGGTATC  59 364
LK412_RS09725 2025580 .. 2025604 +  -7.2   -3.4072   CATTTCGTGCCGGCC          GGCGTCAA CTGCTATTC TTGACGCC          TTCTCCTGCCAGGTC  56 54
LK412_RS09730 2026476 .. 2026489 +  -2.3  -2.70354   GCGCGTGGGCGACGC               GGTCG AGAT CGAAC                TGGATTTCTAGCCCC  38 1
LK412_RS09735 2027008 .. 2027035 + -10.5  -2.55253   GGCCTGACGGCCGTT        GCGCGCGCGCCC GGCAA GGGCGC-CGCGG        TCACTTCCGATTCGT  57 34
LK412_RS09740 2028127 .. 2028169 +  -7.7  -5.59357   CGGCGCGGGAACCCG GGGCGGCATCC--TCACACGC GGC GCGTGCAAATGGATACCGCCC TTTTTTTAATGTCAT 100 49
LK412_RS09745 NONE
LK412_RS09750 2030919 .. 2030937 + -17.4  -5.78622   AGGCGACGCAACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGCGTAC 100 47
LK412_RS09765 2033829 .. 2033841 +  -6.2  -3.30124   TTCGCCCGGCTGAAA                GCGG TCAGT CCGC                TTATAACAACTCAAC  53 28
LK412_RS09770 2035438 .. 2035495 +  -3.1   -4.2679   TATTCTGGGGAATAT CCAAGAACTGAGTCGCCGCGCGGCGCCG CCA TGGCGCCGCGCAGC-ACGTAGGAGATCG TTTTCGTGCAAATTC  63 15
LK412_RS09775 NONE
LK412_RS09780 NONE
LK412_RS09785 NONE
LK412_RS09790 2040289 .. 2040307 + -17.4    -5.252   GCGCGACGCGCTGCG             GGCCGGCC GCT GGCCGGCC             TTTTTTATGGCCATG 100 42
LK412_RS09800 NONE
       pilO2 NONE
LK412_RS09810 NONE
LK412_RS09815 2047343 .. 2047368 +    -6  -4.15044   ATTGGTCAGTTTCTA         CGCCAGCCAA TAAGCC TCGGCAGGCG          TTTCTTCACGCAGGA  66 13
LK412_RS09820 NONE
LK412_RS09825 2048813 .. 2048844 +  -8.7  -2.94218   TCCGGGCAAGGAGTA     GGG-CGGCGGCGCTG GCAT CGGC-CTGCCGACCC      TCTATAATCAAAAAT  54 25
        alaS NONE
LK412_RS09835 2051766 .. 2051793 + -21.4  -3.01791   GCGCCTGCCGGCAAG        CAAACGGCCCGC GCAA GCGGGCCGTTTG         TCTTGGCGCGAGCGT 100 41
        rpsP 2053076 .. 2053094 + -10.2  -4.55295   CTGCATTTCTTGAAA             GCGCTGCC TAT GCCAGCGC             TTTCTTTGTCCGCAA  89 139
        rimM NONE
        trmD 2054899 .. 2054911 +  -9.1  -4.08216   GGCCAGTCCGCAGCG                CAGCG CCA CGCTG                TTTTCGGCCGACTCG  72 400
LK412_RS09885 2060281 .. 2060307 +   -15  -3.17075   CGCTTGCCATGGGCA         GGAACCCCCGGC CGC GCCGGGGGGCCC         TTGCGTTCAGACGCC  76 85
         ndk NONE
        rlmN NONE
LK412_RS09905 NONE
        ispG NONE
        hisS NONE
LK412_RS09920 NONE
        bamB NONE
         der NONE
        hisC 2072622 .. 2072636 +  -9.2  -2.52464   GTAGAGTACTGATTT               CGGCGC ACT GTGCCG               TCACTTAAAACAAAC  54 118
         hfq 2072932 .. 2072961 + -17.2  -4.36595   AGCATTACCCTTGAT       TGCCCGCC-GCGC GGCCA GCGCCGGCGGGCA       TTTTCGCTTTGGCTC 100 53
        hflX NONE
        hflK NONE
        hflC 2076383 .. 2076412 + -19.3  -4.98531   AAAACATTCCGCATA       CGGCTGAGCGGGC TTAC GCCCTCTCAGCCG        TTTTTCGTTTGGGCA 100 122
LK412_RS09960 2077678 .. 2077688 +  -6.8  -2.55896   GATTTCCGGATTTCC                 CGAG AAA CTCG                 ATATTGATTCGTAAA  47 76
LK412_RS09965 2079004 .. 2079037 + -18.1   -3.9461   TCAAGGGGTAGGGCG     CCGCGGGCCGCGCCCC GTT GTGGCGCGGCCT-CGG     TTATTATTCGCCAGG 100 30
LK412_RS09970 2079822 .. 2079832 +  -3.2  -3.23452   CTGTGCTACTGATGC                 GGCA AGT TGTC                 TTAGCTTGTCGCCAT  46 195
        rpsU 2080147 .. 2080176 +  -6.5  -3.16055   GCCTGTATTGATGCC       TGATTCCCGAATC TATT GATTCCAGAATCA        TTCATCCAGGATTTG  51 30
        dnaG 2082427 .. 2082452 +  -6.1  -4.24002   TGGCGGGTGGCGGCA         TG-CATGTGCCG GGC CGGCGCATGGCC         TTTTGCGGTTTGCGG  70 260
        rpoD NONE
LK412_RS09995 2085259 .. 2085284 + -16.9  -5.14626   TACCAAGTAAACATG         CGGGTCTCGGA GCAA TCCGAGGCCCG          TTTTGTTTTGGTGGT 100 36
LK412_RS10005 2087036 .. 2087052 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
LK412_RS10015 2088741 .. 2088782 +  -6.3  -3.02511   CATGCAGTGGGTGCG CCAGCA-GTCGCCGGCCGGC TGA GCCGGCGCGCGCCGTTCAGG TCTTGAGGCGGTAGC  49 4
LK412_RS10085 2099669 .. 2099681 +  -3.3  -2.52516   TGCCGCACCGCCTCC                AGCAG CGC CTGCA                ATTCGTCCTCGGCAA  39 62
        bioF NONE
LK412_RS10100 NONE
        bioD NONE
LK412_RS10110 NONE
LK412_RS10115 2105538 .. 2105548 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 197
LK412_RS10135 2110169 .. 2110183 +  -5.6  -3.78934   CTGGTGAGCTACAGC               GCCAAG GCC CTGGGC               TTCTTCTAACCCGGG  60 2
LK412_RS10150 2113429 .. 2113439 +  -8.2  -3.33162   TGGTCAACGTGGCGT                 CGGC ATT GCCG                 TTCTCGAATACGCTG  59 280
LK412_RS10160 2115421 .. 2115437 +  -9.3  -2.75481   TGCTCCTGGGTGGCA              GGGGCCC CGC GGCCCCC              TGGTTGGAATTGGCA  55 392
LK412_RS10170 2116760 .. 2116786 + -13.6   -3.7795   TGGATTCGCCGCGCT         TGGCCGCGAGCG CCG CGCCGGCGGCCA         TTTGCTGGGCTTTGG  82 280
LK412_RS10180 2117772 .. 2117799 + -17.8  -3.02144   TCGCGCAGCGTGGTT        TCGCGGTAGGCGC GCA GCGCC-ACCGCGA        TGTTGGCGACGGTAA  82 361
LK412_RS10190 NONE
LK412_RS10195 2119498 .. 2119511 +  -4.5  -3.02144   CGCCGCGGCGCTGCA               GGTCG GTGA TGACC                TCTTCGAGCGCCTGC  46 208
LK412_RS10215 2123866 .. 2123876 +  -3.2  -2.78816   GTAGCTGGGCGGGTC                 GTAC ACC GTGC                 TGTCGTAGGGGCTGG  40 329
LK412_RS10240 2128845 .. 2128860 +  -3.2  -2.52516   CAGCGGATATTGATC              GCCG CCATCGCC CGGC               CTTGCTGGTCGACGC  39 120
LK412_RS10260 NONE
LK412_RS10265 2132764 .. 2132792 + -10.2  -3.52073   TTTCGGCCACCATCA        GCCGGTGCGCCT CGTGC AGGCGCAGCTGC        TTCTGGTATTGCAGC  65 177
LK412_RS10295 2138901 .. 2138925 +  -2.7  -4.07568   CCGTACCAGCGGGCA          CGGCATTGCGG CGG CTGCAACACTG          TTTTGCGCCGGCGCC  59 49
LK412_RS10300 2140176 .. 2140222 +  -9.6  -3.68222   GGTCGCCGCCGGCCA GTTGC-CG-G-GCCAGGTCGCGCG CCA CGT-CGACCTGGCGCGCGTGCGAC TTGTTCGAATTGGCG  68 224
LK412_RS10315 2143074 .. 2143115 + -14.3  -3.19513   GGGACAGGCAAGCAA TTGGCGGGTGCCAGTCCCC CTGT GGGGACAGGCACCCGGGGG  TTAGGTTGCCGTTCT  73 126
LK412_RS10325 2144974 .. 2144984 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS10330 NONE
LK412_RS10335 2147397 .. 2147425 +  -8.1  -4.10552   GCCGGCGTGCCGTTG        TCCGGCTTGGC CGCCTGT GCCATGTCGGA        TTTGCTTTAGTGGAA  69 395
LK412_RS10345 NONE
LK412_RS10350 NONE
LK412_RS10355 NONE
LK412_RS10360 2151243 .. 2151270 +   -14  -3.02144   GACGCGGCGCTGGCG        CGCGCGGCGGCC TGGC GGCCGACGGGCG         TGTTCGGCGGCCTGC  72 225
LK412_RS10370 2153393 .. 2153420 + -10.6   -4.2535   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT  89 104
LK412_RS10405 2158693 .. 2158727 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS10435 2165150 .. 2165205 + -13.9  -2.71712   CGGCATTGCCGCGCA TCCGCGCCGACC-GGCGCGGCGCC ACGGCCATC GTTTCCGCGCCTGGTCGGCACGGG ATTTCCAGGCGGCCA  69 74
LK412_RS10440 NONE
LK412_RS10445 2168023 .. 2168072 +  -5.6  -3.29144   GTTCGATCACAATAC TCG-GCGCGGCTTGACACCGGGCCG CGC CGGCCCGCGG--GGGCCGCGCACAA TTATCAACACCATCC  51 12
LK412_RS10450 NONE
LK412_RS10455 2170377 .. 2170393 +  -3.6  -3.14344   GCGCCGGCCACGCGC              TCGGGC GCCAG GCCCCA              TTCGTGCAGCACCTC  45 102
LK412_RS10490 NONE
LK412_RS10495 NONE
LK412_RS10500 2178422 .. 2178432 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
LK412_RS10505 2179688 .. 2179742 + -12.1  -3.01712   AAAGCCGGGCCGCCG GCCA-GCAT-GGCCGCCGCCGTGGTGG CGC CCATCAAGGCCGCGGCCGACACGTGGC TGTTGCCCGCCAGCC  66 277
        queF 2182863 .. 2182889 +  -7.9  -2.52464   CAATAGCCGCGTTCA         GCGCGGTGCGG CGCGC CTGCATCGCGA         TCCATTGCGCCAGCA  49 35
LK412_RS10585 2198962 .. 2199001 + -11.3  -3.28712   GCTGACCGCCTGGCG  CTGCCCGCCCGACAGCA GGCCGA TGCGGTCGGCCAGGCGG   TTCTCCAGCCCCAGG  66 387
LK412_RS10675 2218019 .. 2218038 +  -3.4  -2.82595   ACAGGTCCTGAGGTG            GCTTACGG CTTG CCGCACGC             GTTTCGGTGGTTCAA  41 175
        rpmB NONE
        rpmG 2218748 .. 2218769 + -18.7  -4.86731   GCGCGCCATGGTGAA           CGGCCCCGC CAGG GCGGGGCCG            TTTTATTTGGCAAGG 100 68
LK412_RS10700 2222566 .. 2222596 + -22.6  -3.85698   CGTCTCAGGTCAAAC       CGCAGAGCCCGCCG CAC CGGCGGGCTCTTCG       TTTATGCGGCGGCGA 100 49
LK412_RS10705 NONE
LK412_RS10710 2224396 .. 2224436 +  -2.4  -5.00884   TCCTATAATCGATGG T-TTTGACCGCCCGCGCCC TGCC GGGCGCGGTCCGTTACCTA  TTTTTTCGCACGAGT  79 45
        leuS NONE
        lptE NONE
        holA NONE
LK412_RS10730 NONE
LK412_RS10735 2230696 .. 2230706 +  -2.4  -3.01712   TATCGGCGCCCGCCG                 CCAG GCA CAGG                 TCTTCCCGGAAACGC  41 104
LK412_RS10745 NONE
LK412_RS10750 NONE
LK412_RS10755 2234270 .. 2234294 + -13.6  -4.09685   CCCCCAAAAACAAAA         CCCCGCGAGCC GTGA GGCT-GCGGGG          TTTTGAGCAATAAAA  85 355
LK412_RS10790 2242057 .. 2242075 +  -8.1  -3.20348   ACCTTCGCCATCTGG             GTGCTGC TGTTC GCAGCGC             TTGCCTATTACTCGC  54 285
LK412_RS10805 2245854 .. 2245909 +  -8.2  -3.35046   TCCGTCATTTCCCTC GCGCCGCCTGGCGCC-GC-GCACCTTG CTGGC CATGCTGCTGCTGGC-CCTGGCGACGC TGTTTGCCGCGATGC  58 196
LK412_RS10810 2247306 .. 2247320 +   -10  -3.33696   GGCGTAGCCGCTGGT               TTCGCC GCT GGCGAA               TTGCTTGGAAAAGCC  63 336
LK412_RS10835 2250628 .. 2250648 +  -4.7  -3.62046   AGCTCGCCGGCCTCG           CC-GGCCA GCGCCA TGGCCAGG            TTCTTGGGCGAATGG  54 285
        acnB 2254198 .. 2254217 + -16.4  -4.91852   TTCGGCCATGACAAA            GGCCCGCC GCAA GGCGGGCC             TTTCTTTTTGCTGCG 100 48
LK412_RS10855 NONE
LK412_RS10860 2255477 .. 2255487 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
LK412_RS10865 2256613 .. 2256625 +  -4.8  -4.07568   GGTCAGGCTGCCAGC                CTGG TAGTC CCAG                TTTTCAGGCGCCCCC  63 147
LK412_RS10880 2260631 .. 2260651 +  -3.8  -4.09864   GAGCACGTCGGCCCG            GCGCCCGC CTCGC GCGGGAAC            TTTTGACGCATCGAT  61 108
        acnA 2263525 .. 2263548 + -19.6  -5.26875   CCTGCGCGACCCGAA          CCCTCCGGCC TGCT GGCCGGAGGG           TTTTTTCGTTGGACG 100 59
LK412_RS10895 2265754 .. 2265774 +    -4  -3.79687   GTTCCACTGACCGGA           TC-GCGCCGC CAT GCG-CGCCGA           TATTTTCTGCCGCGT  57 31
        earP 2266911 .. 2266927 +  -2.2  -2.64274   TGCTTTGCCCGGATC              GGCC GGTGCTCAA GGCC              TCACTTTGACAGCCT  38 60
         efp 2267607 .. 2267626 + -16.4  -5.75342   CAGGCGCAACCGAAA            CGGGCCGC ATGC GCGGCCCG             TTTTTTTTGCCCCGG 100 56
LK412_RS11010 2287776 .. 2287788 +  -5.5   -3.2614   TCTTGAAAAAAGCTG                GCACG GTT TGTGC                TTGGTATGGGGCATC  51 256
LK412_RS11030 2290986 .. 2291039 +  -8.8  -2.82623   ACTTCGTCAACGATT GACGGTTGGCA--CGGTGCCTGTCCC CACG GGGACAGGCACCGCATCCCCGCCTAC TCGTTCTCCGCCCCG  54 24
LK412_RS11070 2302264 .. 2302306 + -10.5  -3.40403   TAGTAGCGCGACAGC GCGCGTGA-GCACGCCGCGC GCAT GGGCGGCCTGCATCACCTGC TTGTCGTCCAGCCCC  65 171
LK412_RS11080 2305034 .. 2305077 +   -34  -3.06815   TTGTTTGGATCGTTC GACGCGGGATGGGGGCGCCC CCAT GGGCGCCACCATCCCGCGTC TGTATTGAGGAGGAT 100 41
LK412_RS11085 2306589 .. 2306612 +   -21  -5.47399   CCCGCGGGCAAGCAA          GGCCGGCGCC TTCG GGCGCCGGCC           TTTTTTTCGCCTTGC 100 47
LK412_RS11090 2307678 .. 2307708 +  -5.4  -2.71712   CCCTAGGGCACGACC      TCGGCCAGCACCT CGTCGC AGG-GCCGGCTGA       CTTTCAGGGCGAGCA  45 107
LK412_RS11150 2322264 .. 2322278 +  -5.6  -2.78384   CCACCCGCAAGCGCG               CCGGCA GGC TGCGGG               TGTAGTCGCCCAGCC  43 485
LK412_RS11190 2331212 .. 2331267 +  -6.6  -3.31144   ACGCCGAGCCGCTGG TCGAAGGCCGGCGCG-CGGCGGCCTG AGGCCG CCGGCCGCCGGCGCGCCA-CCAGGGG TTATCCCCCTGGCCG  53 0
LK412_RS11195 2332293 .. 2332332 +   -15  -3.15544   GCTGACCGTGTGGAC GGCGGCC-G-CCGCGCCG GCGCTG CGGCGCGAACTGGCCGCC  TTGCTGGACCTGCCG  76 483
LK412_RS11205 2334199 .. 2334238 +  -9.3  -2.87132   AGCGTCGATGGTGTA  CGGCACTGTGCCTGTCCC GGCGG GGGACAGGCACACC-CTG  TATGTCGGGACAGGC  56 100
        pgaA NONE
        pgaB NONE
        pgaC NONE
LK412_RS11265 2347841 .. 2347855 +  -5.6   -4.1891   CGCCACCAGGTCGGC               CTGCCC GCT GGACAG               TTTCTGTTCGGCCAG  66 180
LK412_RS11280 NONE
LK412_RS11285 NONE
LK412_RS11290 2350638 .. 2350648 +  -2.4  -2.54523   GAAAACCCACCTCCA                 GGGG TAA CCCA                 TGCATTCCAGTCTGC  38 19
LK412_RS11295 NONE
LK412_RS11300 NONE
LK412_RS11305 NONE
LK412_RS11310 NONE
LK412_RS11315 2356250 .. 2356277 + -18.6  -3.11687   GACAGGCGCAAAAAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTCGGTACTGCTTGC  90 189
LK412_RS11350 2363208 .. 2363223 +  -3.2  -4.07568   TTCCACCGGGGTATC              GGGC CGCAACTC GCCC               TTTTCGACCGCGCGG  60 198
LK412_RS11405 2372309 .. 2372330 + -14.5  -4.93696   GCCGCAAAAGAAAAA           GGCCCTTGA TTGC TCAAGGGCC            TTTTTGATCTTTGGC 100 209
LK412_RS11445 NONE
LK412_RS11450 2380697 .. 2380707 +  -2.4  -3.06796   CGTGATCATCGAAAA                 GGCC GAA GTCC                 TTGAATAAGCTGGCG  41 7
LK412_RS11455 2381663 .. 2381688 + -19.1  -4.55798   CCGCGCCGGGAAAAA         GAGCCTGTCCC CGTC GGGACAGGCTC          TTTTCATTTGGCGTA 100 204
LK412_RS11475 2386021 .. 2386050 + -22.3  -2.62616   CCACTCCGGCGGCCA       GTGTGCCTGTCCC CGCC GGGACAGGCACAC        TGCTGTACGCCATCG 100 87
LK412_RS11485 2388258 .. 2388274 +  -5.7  -3.09803   CGCGCACATTGACCA              CCGTGCC GTT GTCGCGG              TATTCGCTGGCCTTG  48 194
LK412_RS11500 2391286 .. 2391318 +  -8.5  -3.61715   ATCGCCCCGGCCTCG    CCGCCCGCCA-G-GCC GAAC GGCGCATGGCGG-CGG     TTGTTCGACAGGATG  63 184
LK412_RS11515 NONE
LK412_RS11520 NONE
        dctP NONE
LK412_RS11530 2398808 .. 2398819 +  -7.2  -3.27923   GCGCTGGTGGCCAGC                GGCC TGGT GGCC                 TTGCTGCTGTTCACC  54 111
LK412_RS11540 NONE
LK412_RS11545 2402067 .. 2402086 +  -2.7  -3.58343   CACCAACGTCATCGG            CTGCGCC ATCTTC GCCGCGG             TTTCCGGCTCGTCGG  49 332
        bvgA NONE
        bvgS 2426064 .. 2426081 +  -3.4  -3.73775   CGGCCCGGTGCAGCC             GCC-GCA GGCTA TGCAGGC             TTTGCTGGCCATAGG  55 419
LK412_RS11635 2433111 .. 2433123 +  -3.3  -3.13371   CGCTATTTTTATTCG                CCGGG CGC TTCGG                TATATTAGTGGCCTG  44 76
LK412_RS11640 2434004 .. 2434019 +  -7.5  -3.39895   CCTGGGCCCGCTTGC              GCCGG CGGTTT CCGGC               TTCGTTCCTCCCGAC  59 133
LK412_RS11645 NONE
LK412_RS11650 NONE
LK412_RS11655 NONE
LK412_RS11660 NONE
LK412_RS11665 NONE
LK412_RS11670 2440700 .. 2440720 + -10.4  -2.70932   CTCGACGCCATGGTG           GCGC-GCGC CAAC GCGCCGCGC            TGATTCACCCCGCCC  57 2
LK412_RS11740 2454441 .. 2454451 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS11745 NONE
LK412_RS11770 2461887 .. 2461917 +  -5.2  -3.14602   TCGCAGCAGGTCAAG       GCGCGCCTGCTCCC CTA GGGAGCGCGTCCGG       TCTTGGTCGACTAGA  49 8
LK412_RS11790 NONE
LK412_RS11795 NONE
LK412_RS11800 NONE
LK412_RS11805 2470539 .. 2470549 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS11810 2471730 .. 2471744 +  -8.5  -3.35813   TGCCTGGAATAAGGG               GCCGC TCGGC GCGGC               TTCGTTAACCTCGAC  59 202
LK412_RS11830 2477158 .. 2477171 +  -8.1  -3.06261   CGACCTGCGCCGCCA               GCTCG GCTT CGAGC                TGTTCCGCGTTCGCG  52 279
LK412_RS11840 NONE
         alr NONE
LK412_RS11855 NONE
LK412_RS11860 2484931 .. 2484946 +    -6  -3.53811   CGCAGCATGCGGTCC              GCGGCG GTCT CGCCGG               TTTCCACCACGTAAC  57 158
        bspR 2487072 .. 2487105 +  -2.3  -3.60792   GTAGTCCCCATACGT     CGCGTCGTAAGTTTT ACGG AAGACGTTCAGCGCG      TTGTATCTGAATGCT  48 37
LK412_RS11885 2488260 .. 2488270 +  -2.4  -4.07568   CACCACCGCCAGCGT                 GCTG ATG CTGC                 TTTTCCGAACCCGGG  58 448
        bopN NONE
        sycN NONE
LK412_RS12005 NONE
LK412_RS12010 NONE
        bcrD NONE
        bscD NONE
        bscE NONE
        bscF 2509872 .. 2509893 + -12.9  -3.01712   TCGCCGCCGACCTAG           ACGCCGCGC GTCA GCGCGGCGA            TATTCGGGGCCGAGG  70 65
LK412_RS12040 2512103 .. 2512115 +  -4.1  -3.55444   AGGCGGTCGCCCGAG                TCGAG GTC TTCGA                TTTCCACGGTCGCGC  51 511
LK412_RS12050 2515154 .. 2515194 +  -3.2  -3.28712   CGTAGCGGTCCAGGT CCT-GTCCG-GTCATGGCGG CGA CCGCCTTCACGTGGCCCAGG TTCTCGGCCACCAGG  47 523
LK412_RS12060 2516441 .. 2516465 + -11.4  -3.14344   TGGCGCAGCGGCTGG         CGGCGCG-CTG AAGC CGGCCGCGCCG          TTGATGGCGCGCATC  66 15
LK412_RS12065 2518040 .. 2518074 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS12100 NONE
LK412_RS12105 2526160 .. 2526176 + -15.1  -3.05384   GGCTGCGCCGAGACG              GCCGGCG TGG CGCCGGC              TTCGGTCGGCAGGCC  74 475
        htpX 2528544 .. 2528563 + -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 52
LK412_RS12135 NONE
LK412_RS12140 NONE
LK412_RS12145 NONE
LK412_RS12150 2533593 .. 2533605 +  -4.7  -2.92192   GCCCCCGGCCACCAC                GGCGG CCT CCCCC                TCTCATTGAATGAAC  44 4
LK412_RS12155 NONE
LK412_RS12160 2536783 .. 2536838 +  -5.5  -2.82623   GGTTGGACGCCACCA CCACATCGAACCAGTCCGGGTGCTGCAC GAA GTGC-GCGCACAGGATG-T-CGATGTGG TACTTGTCCCAGCGC  44 400
LK412_RS12175 NONE
LK412_RS12180 NONE
LK412_RS12185 NONE
LK412_RS12190 2544905 .. 2544939 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        gabT NONE
LK412_RS12205 NONE
LK412_RS12210 NONE
LK412_RS12215 NONE
LK412_RS12220 NONE
LK412_RS12225 2552247 .. 2552303 +  -3.7  -3.53012   GGCGCGTCACCATGC CGGTGAC-CGGCTCGCCGCGCAGGA AGGCGCGGA TCTTG-GCCGCCAGCTGCGCCACCG TTTCGCGGCGCAGGC  49 65
LK412_RS12235 2555130 .. 2555146 +  -2.1  -3.17051   TATCATGCCTATCAG              GCCCGAT TGC ACCGCGC              TGTTGCTGGTGCCGG  43 498
LK412_RS12250 2558520 .. 2558538 + -17.4  -3.55622   AGCGCAATAACCGTC             CGGGCGGC CAT GCCGCCCG             TTTCCCGGCCTTGCC  89 31
        purD NONE
        hemF NONE
        nadD 2561468 .. 2561480 + -10.5  -3.93489   TCCGCCACATCGACA                CCCGC GCC GCGGG                TTATATTTATCGTTA  77 60
        rsfS NONE
        rlmH NONE
LK412_RS12280 2563445 .. 2563475 +  -7.5  -2.73364   GATACGGCGCCCGCC      GCGCAGCAACGCGC CCAG GC-CGTGGCTGCGG       TGCTTGGCATCGACC  49 472
LK412_RS12315 NONE
         rng 2574712 .. 2574731 +  -7.8  -3.67597   ATCTAGCGCATCGGG            CCCGGCATG CAG CG-GCCGGG            TTCTTCAATAGCGCC  63 35
LK412_RS12335 2578036 .. 2578056 + -15.4  -2.57132   CAGGCGCTGGCGCTG            GCCGCCCG ACAGG CGGGCGGC            ATTCTGGCCCACCGG  69 298
LK412_RS12345 NONE
LK412_RS12350 NONE
LK412_RS12355 2581701 .. 2581739 + -19.7  -3.01712   AGCTGACATCCGCGG  C-GAGGTGTGCCTGTCCC CACT GGGACAGGCACACCGCAG   TGTTGACGGGCGCCG 100 84
LK412_RS12370 2586038 .. 2586077 +    -2  -3.44527   CTCGCGTAGCGGCGC GGGCAGGCT-GCCCGCGG CAGCCA CCA-GGTCGAGCCAGCCC  TTGTCGTAATCGGTG  47 463
        lpxO 2593917 .. 2593952 + -20.4  -2.53015   TGGCACTCTAACCAC    CCGGGTGCCTGTCCCC GCGG GGGGACTGGCACCCGC     TGACTTGGCGCCTGT  95 30
        argA 2599457 .. 2599511 + -13.5  -3.04322   TGGTTTTCATCAAGA AGCTGTAACCAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTAAA-ATGGCC TGTTCGCAACTTACC  70 18
LK412_RS12415 2599838 .. 2599853 + -11.8  -4.90266   TTCGCCTCATCGCAA              CCGGCC GGCA GGCCGG               TTTTTCATTGATGCC 100 53
LK412_RS12420 2601841 .. 2601863 + -12.6  -3.61715   TCTCGATGGCTTCTT           CGCCGCGCGC CAG GCGCTCGGTG           TTCTTGACCCCGGTG  74 122
LK412_RS12445 2607819 .. 2607873 +  -7.2  -3.39327   ATTGAGCGAATCGCC GCCGCGCGCGTAGTACATGTAGAC CACGCCCCC GTC--CATGAACAACGCGCGCCGC TTGTGGGTGTAGCCG  55 480
LK412_RS12495 NONE
LK412_RS12500 2617927 .. 2617937 +  -3.2  -2.63631   TCCCTTCGAGCAACC                 TGGG CTA TCCA                 TCATGTCGCAGTTGA  39 53
LK412_RS12505 2619252 .. 2619262 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS12510 2620286 .. 2620321 + -14.7  -2.70932   TCTAGTGCATCTCAG   CGCGGCGG-GCAGGCGG CCCG CCGCG-GCGCCGCCGCG    TCGTTCCCGCCCACC  72 45
LK412_RS12560 2628607 .. 2628628 + -14.4  -4.07885   CCGGCATTGCCGCCA           CGGGCCCG CGCAGA CGGGCCCG            TTTTGCAGGACCGTC  85 42
        prpC 2631051 .. 2631102 +  -7.6  -3.55761   GGCCATCGTGCCGCG CCGGGTCCGCCATG-CCGGCCCGGC GCG GCCGGCCCGGCCCCCGCAGCCCCGC TTTCCGGCCTGCCTG  60 53
        acnD NONE
        prpF NONE
LK412_RS12585 NONE
LK412_RS12590 2636937 .. 2636950 +  -3.9  -3.53012   TCACGCTGGTTGTCG               TCAAA CCCT TTTGA                TTTCCGCGCCAGCGA  51 12
LK412_RS12595 2638385 .. 2638396 +  -7.2  -3.28712   AAGCGCCGGCCCGCG                CGCC ACGC GGCG                 TTGTAAAAGCGCCGC  54 39
LK412_RS12600 2638838 .. 2638856 +  -7.4  -5.75342   AAGCCCCTTTTAAGA             CCCGCT CTAAACC AGCGGG             TTTTTTTTGGCCGGG 100 96
LK412_RS12610 2640381 .. 2640401 +  -8.3  -3.09492   AATAACCCTTATACG            TCCCCGT TAGGGAT ACGGGGA            TGTTGCAGTTCACGG  56 39
LK412_RS12615 NONE
LK412_RS12620 NONE
        hslO NONE
LK412_RS12630 2644919 .. 2644935 +  -7.9  -2.84325   ACAGGCCGGACTTGT              CCACGCC GAA GGCCTGG              TCGTATTTGCCGGGC  52 449
LK412_RS12650 2648409 .. 2648442 + -27.5  -3.16742   CGGAAGACAGCGGTT     TCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGA      TTACTGACCATTAAC 100 487
LK412_RS12745 2668837 .. 2668883 + -16.5  -5.00884   CGGCATGTAAGCGCG GGCGCGCACGTGGGCGCC-GGCA GGA TACCAGGCGCCCTCGCG-GCGCC TTTTTTCCAGACCGT 100 31
LK412_RS12750 NONE
LK412_RS12755 NONE
LK412_RS12760 2671565 .. 2671583 +  -8.8  -3.45849   GATGCCGTCCAGGCC             CGCGGC CAGCCGC GCCGCG             TTGTCGTGGTCTAGC  61 273
LK412_RS12795 2680157 .. 2680174 + -14.1  -4.41494   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 61
LK412_RS12805 2681826 .. 2681855 +  -8.5  -3.05596   GACAGTTCACAACTA       GCCGTTCA-GGCCG GCC CGGCCCTGCACCGC       TTCGCTGACCACCTG  55 25
LK412_RS12825 NONE
LK412_RS12835 NONE
LK412_RS12840 2689853 .. 2689880 + -18.4  -2.71924   CATGACCTGAGCCGC        GCGGGCGAGGCC TGAC GGACTCGCCCGC         CTTTCCGGGAGGCTG  87 11
LK412_RS12845 2690216 .. 2690235 +  -2.7  -3.63266   ATGCGCAACGTACGG            CCCGGCT GAACAG GGCCCGG             TTTCCGATGGATTTT  53 17
LK412_RS12850 2691058 .. 2691076 + -14.6  -5.78622   CTGCGCAGCGAAAAA             GGCTTGCC AAC GGCAAGCC             TTTTTTTTCGCCTCC 100 50
LK412_RS12855 2692167 .. 2692189 +  -5.5  -3.83026   AGGCGGCCAACCCAT          GACCCGCACC AGCC GG-GCGGATC           TTTCATGTGCCGCGG  60 24
LK412_RS12860 2693280 .. 2693290 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 171
LK412_RS12970 NONE
LK412_RS12975 NONE
LK412_RS12980 2714245 .. 2714276 +  -2.2  -3.11173   ACGCCGAGACCGCCG      CCATCAT-GCTGGCG CTG CGCTAGCTGTGAAGA      TTCAATAGGTTGTAT  42 3
LK412_RS12985 2716223 .. 2716236 +  -2.3  -2.71731   GGCTCATACACGGCG               TCGCC GCGC GGCCA                TAGTTCGACGATCCA  39 171
LK412_RS13075 2734909 .. 2734965 + -11.5  -3.65812   AGGTCCGGCGCACGC GCCCGGCCTG-AG-GCGGCCGG-ACGCC GCGC GGCTTGCCGCCCGGGCTACTGGCCGGGC TTCTGTTCGGCAGCC  75 15
        mobA NONE
LK412_RS13140 NONE
        mobB 2748542 .. 2748554 +  -3.3  -4.36914   GGCGGCGCATTGCCG                TCGGC CGC GCCCA                TTTTCTGCCACAGCG  67 162
LK412_RS13175 NONE
LK412_RS13180 NONE
LK412_RS13185 NONE
LK412_RS13190 2757780 .. 2757804 + -11.3  -3.57792   ACCACCCGCACGCCG          GCCTGCGCCAG CTC CAGCCGCAGGC          TTTCGCAATACGTCG  70 398
         tal 2764060 .. 2764070 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS13215 2765109 .. 2765119 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS13220 2766393 .. 2766406 +  -4.5  -3.28924   CCAGCGCCGCCTGCA               CCG-GC TGG GCGCGG               TTGTGCACCGAGATG  49 295
        smpB 2773186 .. 2773199 +  -5.9  -2.71364   CGCGATTCCTGATGC               GGTCG CGGC CGGCC                TGCTTGGCCGCGTAC  47 29
LK412_RS13280 2776613 .. 2776634 +  -8.6  -4.56597   GTTGACGTCGGCGTT           GCGCGCGG CGTTGA CCTCGCGC            TTTTTCAGCACGCCG  83 258
LK412_RS13290 2777710 .. 2777730 +   -14  -4.77036   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 52
LK412_RS13300 2781369 .. 2781379 +  -2.4  -3.16492   GCGGCAGCACTGCCT                 CCAG GTC CAGG                 TGTTCGTGGATATGC  43 291
         map 2798257 .. 2798274 +  -5.5  -2.87132   GGCCTTCGTGACACG             GCCGG TCGAAATC CCGGC              TCTCTGACCCCCGCC  46 1
LK412_RS13390 2801303 .. 2801318 +  -7.5  -3.30124   GTTCACGCCCGAGAT              GGCGC AGGCGC GCGCC               TTCTACCCGCTCACC  56 420
LK412_RS13400 2802182 .. 2802238 + -31.9  -2.71364   GGCGTTGCGGCGCAA CGCCTGA-CGGC-C-GCGCGGCCGGCTT GCGC AAGCCGGCCGCGCCGCGCCGGTCAGGCG TCGTTGGCCGCGTAG 100 19
LK412_RS13425 2807209 .. 2807221 +  -3.3  -4.57569   CCTTTACCCGGCCAA                TAGGC GGC GCCAA                TTTTTGACAGAATCG  71 117
        fliD NONE
        fliS 2809056 .. 2809081 +  -3.1  -4.82901   CACCCTGCGCCTGCC         GTTCCGGCCTG AAAC CAGGAAGGCAC          TTTTTGTCCAGCCGC  75 14
LK412_RS13440 NONE
LK412_RS13445 NONE
LK412_RS13450 NONE
LK412_RS13455 NONE
LK412_RS13460 2811716 .. 2811765 + -11.4  -3.53444   CGGCCCAGGCGCCAG TTCG-GCCTCGGTG-GCGCCGCCGC TTT GCG-CGGCGCGCACCACGGCGCGCA TTTGCGACAGCATGC  69 276
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 2817435 .. 2817456 +  -2.9  -2.64616   ATACTCCGCCCGACT           GGTACGCCGC CAG GCGG-GTTTC           TGATATCCATGAGCC  39 1
LK412_RS19920 2818597 .. 2818607 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS13500 2819894 .. 2819911 + -10.5  -2.52464   TTTCGCCCTGTTTTT             CGCCTGC CAGC GCGGGCG              TGAATTGCGGCAGAA  56 308
        fliL NONE
        fliM NONE
        fliN 2822052 .. 2822066 +  -5.6  -3.14564   ACCGCTTGAACAGTC               GCCGCT AAA AGCCGC               TTCATGACCGAATCC  49 18
        fliO NONE
        fliP 2823189 .. 2823201 +  -3.3  -2.58544   ACCTGCTGCTCGGCT                CGCTG GCC CAGAG                CTTCTACCAATAGCG  39 0
        fliQ 2823508 .. 2823523 +  -5.4  -2.78712   TGTCCTGAACGCGCC              TGGCCGC GCC GCG-CCA              TGATTGCGTTCACCA  45 33
        fliR 2824439 .. 2824457 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 153
        flgA 2842708 .. 2842723 +  -5.4  -2.79004   CCCCCATCGGGCCGG              TC-CCGC GCA GCGGAGA              ATATTTTGAAGATCC  45 131
        flgM NONE
LK412_RS13630 2843585 .. 2843601 +  -9.3  -3.01712   CATCAAGGCCGCGGG              CGCCAGC CGC GCGGGCG              TCTTGCGCGCGCCCG  57 91
LK412_RS13650 2850578 .. 2850632 +  -7.7  -5.35365   CTGGGGCGCTGGCAA GTAGAAGTCAGCGGGAGCCAGTCCCC GTTC GGGGACAGGCTCCCGG-GTATATTGC TTTTTCTTATGTTTT 100 102
LK412_RS13655 NONE
LK412_RS13660 NONE
LK412_RS13665 2853085 .. 2853095 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS13670 2854223 .. 2854254 +  -5.7  -3.30214   CCGGGGCCTGGATGC      CGGCGCGGGCCGCC TGCCT GG-GGATGGCGCCG      TTGATGTAGTCGATT  52 149
        leuD NONE
LK412_RS13700 2860922 .. 2860932 +  -8.2  -2.57132   AGCGCCACCAGCGCC                 GGCG CCG CGCC                 CTTGTAGGCCACCGC  51 446
LK412_RS13730 2867905 .. 2867915 +  -2.4  -3.68351   GCCGATATTGAGGAT                 GGCC AGC GGCG                 TTTCGATCATGGCCC  53 513
LK412_RS13745 NONE
LK412_RS13750 2873644 .. 2873676 +  -5.4   -3.4072   GCCGCGTACTCGCCC     TGCAGCCGGGCGCCC AGGC GGGCGGTCAGC-GCG      TTGTCGTCGCGGATG  52 281
LK412_RS13775 NONE
        clsB NONE
LK412_RS13785 2880612 .. 2880628 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 525
LK412_RS13795 2881891 .. 2881922 +  -8.5  -3.21099   AATGGCGCCACCGGC      GCGCGGCGGCCGG TTGAGC CCGGGCACGGCGC       TTGCTGCTGCGGCGC  56 9
LK412_RS13800 NONE
LK412_RS13805 NONE
LK412_RS13810 2884148 .. 2884170 +  -8.3  -2.87132   CGCCGCTCGTGAGCC           CCGCGGCGC CCGCC GCGCTGCGC           TATGTGGACGACAGC  54 29
LK412_RS13820 NONE
LK412_RS13825 2887927 .. 2887940 +  -2.3  -2.82635   CCGGCTGTGGCGCCT               GTGGT CCCG ACCCC                TGTCATCCTGAGCGT  40 1
        treS NONE
        glgB NONE
        glgX NONE
        treZ 2897395 .. 2897433 +  -3.7  -2.87132   CCAGGCCCTCGCCCG  GCTGTGC-GCGCTGGCGGG CGT CTCGCC-GCGCTGGACCGA  TGTATGGGGCCGCGC  43 48
LK412_RS13850 NONE
LK412_RS13855 NONE
        treY 2901426 .. 2901465 + -15.6  -3.14132   AATGATGCGCAGGGC  CGGCCGCAGCGCCCGCGCG GCC TGCGCCAGCGC-GTGGCCG  TTCATGCCGGGCAGC  78 169
        ptsJ 2907432 .. 2907448 +  -4.3  -3.09908   ACATCAACCAGGCGA              CTTCCCA TAA TGGGGCG              GTTATTTTCCGAACG  47 55
LK412_RS13885 2908108 .. 2908118 +  -5.4  -3.03798   CTGCCCATCGGCCGG                 GTGA GCC TCAC                 ATTCTTTCTCGCCCT  47 186
LK412_RS13890 NONE
LK412_RS13895 NONE
LK412_RS13900 2910328 .. 2910349 +  -9.4  -3.01712   CCGCACCGCCGCCTG           GGCCGCGCC ATGGC GGC-CGGCC           TGTTCCACCGACAGG  57 396
LK412_RS13915 2911950 .. 2911972 + -20.6  -5.41746   GCCGCGCCGCGATCG           CAGGGCCGCC TCG GGCGGCCCTG           TTTTTTTGGACGCTT 100 51
LK412_RS13920 NONE
LK412_RS13925 2913212 .. 2913222 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS13930 2914290 .. 2914312 +  -3.3  -3.24747   GGCATCGGCCCGCCT           CGCCGGG CCCTGCCCA CCCGGAG           TTCATCATGTCACGC  46 89
LK412_RS13935 2915236 .. 2915286 +  -5.6  -3.42996   ATGGTGGGCTCGATG CCCGCGTCGCGCAGCAT-TTGCAGCA CGT TGC-GCGACGTGCTGCA--ACGCGGG TTGTGGTAGATGGTG  52 403
LK412_RS13965 2920123 .. 2920136 +  -2.3  -2.62184   TCCGGGCGCGCGTCC               GCTCG ACCT CAAGC                TGGTCTGACGCGCAC  38 4
LK412_RS13970 2920798 .. 2920819 +  -5.7  -3.05384   CGCTATCATGACGGC           TGCCCGCCG GCTC CGCCCGGCA            TTCGCTCAGGACGCG  47 96
LK412_RS13975 NONE
LK412_RS13980 NONE
LK412_RS13985 2922284 .. 2922296 +  -2.6  -2.78384   GCGGTGGCCGTGGTC                GTGC AGAGG GCGC                TGTCATGAACCGCAC  38 5
LK412_RS13990 2923053 .. 2923069 +  -4.4  -3.10641   AAAATTCTCCAGCCC             CGAGTGG ACCG CC-CTCG              TTCCCTGATGCCTTC  47 1
LK412_RS13995 2923949 .. 2923987 + -10.4  -3.53012   GCGCCGGCGGCGGGC  GCCGCCGAACAACGCGGC GCAAG GCC-CGTTGTTCG-CGCC  TTTGCCGCGCGCCGG  67 41
LK412_RS14000 2924586 .. 2924598 +  -4.7  -3.02739   TGTCGCCACGGACGC                CGCGC GCG GCCCG                TCTGTATCCGTTCCC  45 82
         asd 2925580 .. 2925636 +  -2.2  -2.74192   TTCGCTTTATCGATA CATGAGGGCTTGCTAGATTGCGGC CTGGCCATC GCCGCCGTTTCTGGAGCTCTCATG TCGTCTTCCGCACTG  38 56
LK412_RS14010 2927214 .. 2927246 +  -5.6  -4.31837   CGGGTCGTTGGGCAC     GGCGATG--GTCGCGC CCT GCGGGATGGCATCGCC     TTTCTTCAGTTTCTT  69 461
LK412_RS14030 2929454 .. 2929511 + -12.5   -3.3514   GCCATGCCCGTCGTG CTGGCGCTGACCGCGT-CGCTGGGCGGG CAG CGCGCCCTGCGCACGCAGTATCCGCTAG TTGTGAACTGTCAAT  73 193
LK412_RS14050 2932801 .. 2932834 +  -4.5  -3.84451   TTGCCGCAGCGGCCA     TGGACGAGTTGCTCGG AGC CC-AGTGTCTCGACCA     TTTCGATTTCGGCGG  60 296
        proC 2938045 .. 2938065 +  -5.3  -2.53263   CGCCGGTCGCGCGAG            CTGGCCGAG GAG TTCGGCCGA            TGAGTTCGGCGTCGC  44 2
LK412_RS14080 2938936 .. 2938946 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 315
LK412_RS14085 NONE
LK412_RS14090 2941128 .. 2941164 +   -13  -2.71791   TCAACGTACGCCCAG    GTTTCCGGCTCCGG GTCGCACTA CCGGAGCCGGAGCC    ATTTGGAGCACGAGT  67 72
        livH NONE
LK412_RS14100 NONE
        livG NONE
LK412_RS14110 2945056 .. 2945066 +  -8.2  -3.60098   AGCACCACGGCATCG                 GCGC CGC GCGC                 TTTCAGGTGGGCGAT  62 267
LK412_RS14125 2947183 .. 2947221 +  -4.4  -3.53012   CGGCGCTGCACACCA   GTTGGCCTGCCACGATGT AGA ACATCGTGGTCAGCATGC   TTTCGCCGCGGCCGA  49 338
LK412_RS14135 NONE
        trxA 2955365 .. 2955406 +  -2.1  -4.06864   CCGCGCATTCCCCCC TGATTCCCGC-GCGGGCC CGTCCGT GGCCCGCCGCCCGAACCC TTCTTCTTATCTCCC  58 66
         rho 2956722 .. 2956739 + -14.1  -4.54727   CACGCCCGTCCCGAC             CCCCGGC CCGC GCCGGGG              TTTTGCTTTGCGGGC 100 54
        glnE 2963305 .. 2963317 +  -4.7  -4.09243   TAACGGTTTTTCCCC                GCTGC AAA GCCGC                TTTTCACGCCATGTC  62 38
LK412_RS14180 2964153 .. 2964165 +  -6.2  -4.11501   ATATTCACCGCCAAC                CCGC CGCGC GCGG                TTTCCTTGTATTTGG  69 191
LK412_RS14190 2967501 .. 2967540 + -11.5  -3.05384   GATACACCACGATGC GCGATGCCTG-GGC-GGGCG CGC CGCCCTGCTGCAGGCG-CGC TTCCATGGCCCGCAC  62 181
LK412_RS14210 2972673 .. 2972706 +  -5.2  -3.14963   CACGGCGCCGGCCAG     GCCCTAGACTGCCA CGCAAT TCGCAGTCCAGCGC      TTCACTCGTTATGCC  49 133
LK412_RS14215 NONE
LK412_RS14220 2973910 .. 2973920 +  -4.6  -4.07568   GAGGCGGCCGGCACG                 TGCG TTA CGCG                 TTTTCGCGCGAAGCG  62 92
LK412_RS14265 2985505 .. 2985528 + -11.7   -4.8622   CAAATCGTTGATCAA          GGCCTGGCA CATCGC TGCCGGGCC           TTTTTCATTGGCGCG 100 39
LK412_RS14285 2989778 .. 2989788 +  -5.4  -5.69473   TGCACGTCCCCCATT                 TCTC ATC GAGA                 TTTTTTTCTGATATC 100 300
LK412_RS14295 2989952 .. 2989973 + -17.3   -4.8622   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 34
        radC 2992905 .. 2992919 +  -4.2  -2.73124   CCGGGCAGTTCGTTA               GACTAG GAG CCAGTC               ATTTCAACCCTAAAC  41 71
        kynB NONE
        kynA 2994584 .. 2994620 +  -3.5  -3.40403   CGTGCGCCGGGCTGC    TTGCCCGGCCTGGCTGG CGA CCCGCTAACCTGGGAAA    TTATCATGAAAGAAG  49 152
LK412_RS14330 2994925 .. 2994940 + -10.4  -5.86061   GAGGCGCACCAGAAA              GCAGCC TGCG GGCTGC               TTTTTTTTCCTCGCG 100 58
LK412_RS14335 NONE
LK412_RS14340 2998269 .. 2998286 +  -6.9   -3.9777   GTGGGCACCGTGATG             CGCGCCG CTCT TGGCGTG              TTTCTCGCTCTTGGC  66 147
LK412_RS14360 3002586 .. 3002602 +  -9.3  -2.73364   TGGCCGCCAGCCTGG              GCACGCC GGC GGCGCGC              TGATTACGGTGACGG  55 6
LK412_RS14365 3003427 .. 3003461 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS14375 3005271 .. 3005303 +   -17  -3.01791   ACTCGGCCAGTTCCA     GCGCCCAGGTGCGGG TGCA CCCG-ACCAGGGCGC      TCTTGGCGGCCGAAT  82 290
        hpnC NONE
        hpnD NONE
        hpnE 3010592 .. 3010604 +  -4.7  -2.93073   GAAGACTCCTCAGGC                CGGCG TCG CGACG                TGGTTCTTGAGCCGG  44 450
LK412_RS14425 3013718 .. 3013728 +  -3.2  -3.45366   TCATCCCGGTCGTGC                 TGGC ACT GCTA                 TTCATTCATTGACCG  48 3
LK412_RS14430 NONE
LK412_RS14435 NONE
LK412_RS14440 NONE
LK412_RS14445 3017667 .. 3017695 +  -6.6  -3.28712   CCGTGGCCGGATCGC       GCACGGCCTGGGC GAAC GCCTGGGCCA-GC        TTGTCGCGCACCGCG  52 184
LK412_RS14460 3021514 .. 3021526 +  -4.7  -2.72344   ATGGACAATCTCCCC                GGCCG CAG CCGCC                TGCTTGCACATCCCG  43 499
LK412_RS14480 3024695 .. 3024719 + -13.6  -3.30771   CCCTACGGCCAGTTC         GGTGCGGC-CG CCAT CGAGCCGCACC          TTGTGCCGGATGTCG  74 251
         btr NONE
LK412_RS14515 3035240 .. 3035271 +  -2.7  -3.14931   CGAACCGCCAGCCCT      GCGGGCGGACCTC TACCTC GTGGCCCGCCGGA       TTCATGCGGGCTGCC  43 364
LK412_RS14550 3038695 .. 3038718 +   -16  -3.21416   TGCCGCCTCGGGATG          GCGC-GCGCGC CAG GCGCGCAGCGC          TTCCTGGTAGCGCTC  80 66
LK412_RS14570 NONE
LK412_RS14575 3042304 .. 3042331 +   -14  -4.56597   CTGAGCGCAACCCGA        TCGGCGGCGGGC CCGC GCCCGCCGCGGC         TTTTTCGACAACCAA 100 37
LK412_RS14580 3043215 .. 3043254 + -11.5   -2.9162   CCTTGGCGCGCCATC CTGCCGCGGCGTGCGCC CCCACCAA GGCGC-CGCCGTG-CAG  TCGTTTCCGGAGTTC  63 69
LK412_RS14585 NONE
LK412_RS14590 NONE
LK412_RS14595 3045443 .. 3045475 +  -5.3   -2.9296   CCGCGGCGCCATGAA      CCGGCGCATGGCGGC GGC GCCGTGGGGCGATGG      TATGGTTGGGCTTTC  46 65
LK412_RS14600 3046445 .. 3046468 +  -5.2  -2.89177   CGGCGGCCTGCGGTC          CGGTTGACGCC GCC GGCGTCC-CTG          TGTAGTGTATAGGGT  46 19
LK412_RS14605 3046726 .. 3046773 + -14.1  -3.61517   GCACCGCGGCCGCCT TGCGC-GGCC-ATGGCGCGCGCG CCCG CGCGTGCGCCGGCGGCCCGTGCG TTATTCGACACAGGT  78 75
LK412_RS14610 3047688 .. 3047702 +    -7  -2.85668   GGATGCCTTGGCAAC               GAGCCG GCG CGGCGC               TATGGTATGCGGATA  50 53
LK412_RS14620 3049913 .. 3049933 + -10.3   -3.6502   TGCTAGACTTTTCCG            TGGGCGGCG ATC CGCCGCCGG            TTTCCCTAGGAGGTG  70 70
LK412_RS14625 3050442 .. 3050465 +  -7.4  -3.06302   GGCCCACGGCCGGGC          TGCCGCGTTGC GCC GCGG-GCGGCA          TTCCCTGCAGGTCCT  52 162
LK412_RS14655 3056506 .. 3056528 +  -6.8  -3.29144   CGATGCGTTCGCCTT           CGGCCGCGTC GAG GGCCAGGCCG           TTGTAGCGGCGGTCG  52 305
LK412_RS14665 3058520 .. 3058538 + -10.2  -3.44051   GGGGGCCGCAGGCTT             GGCGCCCA TCA TGCGCGCC             TTCTCGTAGTGGAAC  65 297
LK412_RS14695 NONE
LK412_RS14700 NONE
LK412_RS14705 3067028 .. 3067077 +  -8.4   -3.9392   GCTGCGCCTGTACGG CGGGAC-GC-GCGCCGC-CGGGCGC TGA GCGCCAGCGCGGCGCGGCAGGCGGG TTGTTTACACTGGAG  70 1
LK412_RS14710 3067736 .. 3067770 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS14770 3078765 .. 3078793 + -21.1  -4.08064   ACTCGCGCAGTCCAA        GGAAAGCCCGGCC CCA GGCCGGGTTTTCC        TTTTGCGCGGCCGTT 100 45
         tex 3083429 .. 3083465 + -27.4  -2.71364   AAGCGCTGATCGCAA   CGCAGGCGCCGC-CCCG TCAT CGGGTGCGGCGCCTGCG    TCGTTGCCCCGATCC 100 32
LK412_RS14800 NONE
LK412_RS14805 NONE
LK412_RS14810 3088163 .. 3088173 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 91
LK412_RS14815 3089156 .. 3089195 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
LK412_RS14820 3090712 .. 3090730 +  -8.9  -3.28924   GGTATCGATCTGGCC             GGAAAGC AGCGC GCTTTCC             TTGTCGGCCACCGTG  59 511
LK412_RS14830 3092322 .. 3092339 +  -2.5  -3.58343   ACACGACCGAGCCGG             CCAGCGC CTGG GCGCGGA              TTTCGCGATGCTCGA  50 376
        mdeB 3104683 .. 3104720 + -20.6  -3.06796   CCTGGCAGTCGTGAC   GGCCGCATCGGCCGGG ACGTGG CCCGGCCGATGCCGTC    TTCGCTGCGGTGCAG 100 27
LK412_RS14870 3107272 .. 3107289 +    -4  -3.04144   GGCTCCATAACTCTT             CTGGCG CCAAGA CGCCCG              TGTTACCCATGCAAA  44 179
LK412_RS14875 3107956 .. 3107966 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS14880 3109308 .. 3109338 +  -6.8  -3.65046   GCGCTTGGTCAGGAA      GCGCATGCGCCGG TCGATT TC-GCGCAGGCGC       TTCTTGCCGTACAGG  57 363
LK412_RS14935 NONE
        recJ 3128891 .. 3128902 +  -7.2  -3.65812   GAGCACGCCGCCTGA                GGGC CGCC GCCC                 TTCTGTTACAAACCG  61 26
        prfB NONE
LK412_RS14950 NONE
        lysS NONE
LK412_RS14960 NONE
LK412_RS15005 3144180 .. 3144198 +    -8  -3.53012   GCCAGCATCTGCCGC             GTGACGGC ATC GCCGCCGC             TTTGCAGCAAGGAGG  58 170
LK412_RS15025 3148083 .. 3148103 +  -2.5  -3.31144   GCCCCGGGAGGAACA            TCATGTTGA AAG TCAGCGAGA            TTCTGCGCGTCAAGG  44 60
LK412_RS15030 3148592 .. 3148602 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 74
LK412_RS15035 3149800 .. 3149825 + -16.9  -3.12595   TCACGCGCAGCGGCA         CGCCGCG-CGCA ATC TGCGTCGCGGCG         TATTGCATCATTGCA  80 219
LK412_RS15045 NONE
LK412_RS15050 3152935 .. 3152945 +  -4.6  -3.30124   GCCAGGCGTTCGGCC                 CGCT GAT GGCG                 TTCTGCGCGATAGCG  49 374
LK412_RS15075 3155772 .. 3155787 +  -4.6  -2.57132   CAACTTGTAACGGTT              GGCTGG CCAT CCACCC               CTTATCCAGCGGCGC  42 53
        ftsH 3157865 .. 3157881 +  -2.2   -2.8372   TACGGCGGCCGCGGT              CTGAGC CTGCT GCTAAG              GTTTCATGGCAAATA  40 22
        folP NONE
        glmM 3160107 .. 3160126 + -16.4  -5.06414   CCGGACCTGCCCGAA            GGCCCGCC TGAT GGCGGGCC             TTTTTGTTGCGCGGG 100 48
LK412_RS15100 3161228 .. 3161255 + -21.4  -3.48276   CCGACGGGGTGCTGG        GGTGCCTGTCCC CGCG GGGACAGGCACC         TTGTATCGGGGCAGG 100 154
        ppk1 3165158 .. 3165177 +   -15  -5.09259   CGGCCCGCTGCCGCC            TGGCCGCC CGCG GGCGGCCA             TTTTATTTTGAAATA 100 43
        pstS 3166418 .. 3166439 + -10.1  -2.52464   CCTGGCCGGACCAGT           GAACGGCGA GCGA TCGCCGTCC            TGACTTCGCGGGGCG  56 68
        pstC NONE
        pstA NONE
        pstB 3169210 .. 3169244 +  -7.7  -3.49858   CGGAAGACTACATCA    CCGGCCGCTTCGGCTG AGGC CGGCCGGCG-GGCCGA     TTCTGGTATAGTTGC  60 9
LK412_RS15135 3169437 .. 3169477 + -11.2  -3.86346   TAGCCGCTCCATGCA TGTCAAAGCCCCGATACGG ATTT CCG-GTCGGGGCTTTCGCG  TTTCTGCGGGCGTGC  77 119
LK412_RS15140 3170523 .. 3170562 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
LK412_RS15145 3171672 .. 3171710 +  -3.8  -3.32844   TCGGGGTCGGGGTGC  CGCCCGGCGTGCTCG ATGACATAGG CGAACAC-CCGGCCG   TTCTCGCGTGCGAAC  47 104
LK412_RS15170 3178076 .. 3178086 +  -8.2  -3.53091   CATCAGCCCTTGCGC                 GCCC ACC GGGC                 TTTCGGCAAACGGGT  61 336
        ubiD NONE
        cysG 3184114 .. 3184154 + -14.7  -3.32498   TGCCCAGGCCCAGTT CGGCG-CGCGTGCCGCGC AGTTCG GTGCGGTGCGCGATGCCG  TTGGTGTGTACCGTA  79 220
        queA NONE
         tgt 3192935 .. 3192961 + -12.3  -2.70932   GCGCGGGGTCGACTA        GGGCCG-GCC-CC CCC GGCGGCGCGGCCC        TCGTTGCGCCGCGCC  65 25
        yajC 3193435 .. 3193453 + -17.4  -3.65046   TGTAAGGTCACACAA             GGCCCCGC GTG GCGGGGCC             TTGTTCCGCTCACCC  91 36
        secD 3195400 .. 3195425 +  -2.5     -3.37   CCCTGCCGCCCGCCG         TCC-TGATACGC AAG GCGAAACATGGA         ATTTTTCCGGATTCA  46 54
        secF 3196379 .. 3196408 + -22.2  -5.81412   CCCGGTAGTAAAAAA       CCCTGCCCGGCC AAATGC GGCCGGGCAGGG        TTTTTTTTACATGCA 100 48
LK412_RS15255 3198083 .. 3198106 +    -8  -3.61398   CGTCGTCAAGCAGCA          CTTCGGGGCG CGCG CGCCACGACG           TTCTTGAGCACCCAG  60 403
        miaB NONE
LK412_RS15275 NONE
        ybeY 3201570 .. 3201605 +  -5.3  -3.31905   GCGCCGCGCAGATTG    GC-GCCAATGCGCCCC AAATC GGGGAACAATGGCCGC    TGTTGTATGCAAAAT  51 43
LK412_RS15285 NONE
         lnt 3204635 .. 3204674 +    -5  -3.53444   TAGACGATGACGCCG GTGTCGTGG-CTTGC-GC ACCAGG GCAGCAGGTCCGCGGCGC  TTTCGCGGCGGATGG  52 440
LK412_RS15300 NONE
LK412_RS15305 3205736 .. 3205749 +  -8.1  -2.80398   GGTGTAGAAGTTACG               CCGCT GCGG AGCGG                TAGTTCAGTTGGTTA  51 54
LK412_RS15310 3205834 .. 3205855 + -14.5   -5.7946   AAAAAATTCCGAAAA           GCCAGTTGC GTAA GCAACTGGC            TTTTTTTCTTCCCGG 100 40
LK412_RS15315 3207281 .. 3207300 +  -4.8  -3.28712   GCGAATTGGCTTCGT            CGCGGCGC TCCT GCGGCACG             TTGTCCAGCAGCACC  49 235
LK412_RS15380 3219459 .. 3219493 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 493
        infA 3220732 .. 3220744 +  -4.7  -2.90496   GCCCAGCCGTCCGCC                GCAGC ACC GCCGC                TGATTTCCCGCGGGC  44 10
LK412_RS15395 3221147 .. 3221174 + -11.2  -2.75074   GCCCCGATGAAGATG        GCCGGATCGACG CGCG CGTCGTTCAGGC         TGATGTTCCAGTGCA  59 70
LK412_RS15415 3224774 .. 3224803 + -11.3  -2.87132   GTTGCCCACCAGCCG       GGCGGCCACGGCGG TGA CCACCA-GGCCGCC       TATGTAGGCGCCGCG  61 124
LK412_RS15440 NONE
LK412_RS15445 NONE
LK412_RS15450 3228387 .. 3228397 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 54
        yfcF 3230352 .. 3230373 +  -8.1  -3.64599   GGCGCCCCGGTCACA           CGAATGTTGC ACC GCAACA-TCG           TTTGCGGTGTAATAG  63 48
LK412_RS15465 NONE
LK412_RS15470 NONE
LK412_RS15475 NONE
        fabI 3236198 .. 3236209 +  -7.2  -3.33483   GGAATCGGCACCTCG                GCGC CGCG GCGC                 TTCATGATTTCGATC  55 470
LK412_RS15500 3241128 .. 3241138 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS15505 3242149 .. 3242162 +  -3.1   -4.2074   CACAACTAGCTGCCC               GGTTT GAAG AAGCC                TTTCTCTCTTGGGAG  63 32
LK412_RS15510 3243414 .. 3243440 +   -13  -4.65895   CCATGGCAGTACGTA        CGCCCGGCCGC CTCACC GCG-CCGGGCG         TTTTTGCGTCCGGCG 100 79
LK412_RS15530 NONE
LK412_RS15535 NONE
        folD NONE
LK412_RS15545 3255477 .. 3255512 +   -19  -2.59431   TGCAAGCCTGACCTC    TCAGGTGCCTGTCCCC GCAG GGGGACTGGCACCTGC     TGACTTCTGGACGCC  87 30
LK412_RS15550 3256280 .. 3256297 + -14.1    -3.965   ACCCAATGATCCGGA             CCGCGCC CCAG GGCGCGG              TTGTTGCTTTTGCGC  84 32
LK412_RS15555 3256689 .. 3256719 + -25.6  -4.07568   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 44
LK412_RS15575 3263181 .. 3263210 +  -4.3   -4.1822   CACCACCCGCAGCCC       CACCAG-TTCGC ACATGCG GCGAATCTGGCG       TTTCTTGCCCTCGCG  63 182
LK412_RS15585 3264423 .. 3264451 + -10.2  -4.07885   CGCTGGCGCGCGCGC       CCGTCGCGCCGCG CTGA CGCCGC-CGGCGG        TTTTGACGCAGAATC  78 9
LK412_RS15595 3267173 .. 3267189 +  -2.2  -4.42238   CGTCCGACAGGGTGA              CCTCGA CGCTC TCGATG              TTTTCCTTCAACTGC  68 234
LK412_RS15615 3271160 .. 3271180 +  -8.1  -3.01712   CCTGGTGTTGAAGCC            GGCGGGCCC CGA GGCCCCGGC            TCTTCGCGGACCACG  53 438
        mltB 3286802 .. 3286814 +  -4.7  -3.57144   AGATCTTCGGCATGT                AGGCC TCG GGCCA                TTTGCGGATGCCCGG  54 322
LK412_RS15770 3304051 .. 3304071 + -18.3   -5.4505   GCCGCTACAATGAGG            GGGCCTCGC ATA GCGAGGCCC            TTTTTTCTTGCCGCG 100 52
LK412_RS15775 NONE
LK412_RS15780 3305583 .. 3305605 +  -2.7  -2.77899   GCGGGCCCCATGCCC          GT-GCCGG CGCCACAC CCGGCCAC           TGATTGCTCCACCCA  40 59
LK412_RS15785 NONE
        ssrA 3307407 .. 3307429 + -13.6  -5.85178   CAAGTATTTACCTAA           TAGCCAACTT CAA AAGTTGGCTA           TTTTTTTTGGCTGTT 100 57
LK412_RS15795 3307905 .. 3307931 +  -7.9  -2.84298   GGTTTGAAGTGAGAC         ACAAGCCCCGA AGCAA TCGGGGCCTGC         TAGTTGTGAACTGTC  52 29
LK412_RS15805 3309433 .. 3309470 + -11.3   -3.6682   TCCGACGCACCCAGC   AGAGAGCCCCGA-CTGGA CAA TCCGTATCGGGGCTCTCG   TTTGCGTGGGTAGCA  73 55
LK412_RS15815 3311856 .. 3311890 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS15830 3314415 .. 3314448 + -13.1   -3.0497   GACGGCACTCCGTAC     ACGAC-CGCTTCGCGC ATG GCGCGCAGCGCGTCGG     TATTCCAGATACTCT  70 111
LK412_RS15835 3316952 .. 3316962 +  -2.4  -3.02381   CGGAAACCAATTCCC                 CCAG ATG CCGG                 TCTATGGTGTTCTGC  41 119
LK412_RS15840 NONE
LK412_RS15850 NONE
LK412_RS15855 3321973 .. 3322004 +  -5.6  -3.14132   TCAGGCGCAGGGCCA      GCGCCGCCACCGCG TCCT CCAGGTGGCGCGGC       TTGCTCGCCCCCACG  47 102
LK412_RS15870 3325722 .. 3325741 +  -2.8  -3.53761   TTGACAAGCGCCCCC            GCGACGC CCAAGAT GCG-CGC            TTTCGCCGCCCCTTG  49 37
LK412_RS15875 3326314 .. 3326348 +  -7.8  -2.58999   GCGTAAGTCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS15980 3346836 .. 3346847 +  -5.8  -3.53811   TATCGCGCCGCTGCA                CCCT GGTC AGGG                 TTTCGGGCAGATCGA  57 414
LK412_RS15990 3348335 .. 3348382 +  -4.1  -2.71712   GATCGCCTCCTTGGG CGCTGCGC-GGCCG-ATGCGC-CG GCG CGCGCCCGTACGTCCAGTGTAGCG ATTTCGGCGCCGCGC  41 220
LK412_RS16010 3351724 .. 3351758 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS16025 3355362 .. 3355377 +  -3.2  -2.87132   GGCTGACCGAGATGC              TGCTCG GTTC CGAGGA               TCTGTAAGGAGGCCA  41 3
        ilvN 3355885 .. 3355912 +  -8.2  -2.55074   GGATACTGAAAATCT        GACCGGCGCGCC TGGC GGCGCGCCACCC         TGCATTAGCATTCAC  52 24
        ilvC 3357025 .. 3357042 + -14.1  -5.79595   GCAGGCTGGTCCAGA             CGCGCCC CACG GGGCGCG              TTTTTTCTTTTCCGC 100 75
        pssA 3358096 .. 3358109 +  -8.1  -3.27022   CCTGGCGCACGCTGG               GCAGG CCGA CCTGC                TTGATCTCGGCTGGC  55 199
        rpsO 3359060 .. 3359095 + -16.8  -5.04601   CTCCCCATGACGCAA    CCGTGGTCGGGGCGAC GCAT GTCGCAACGGCCACGG     TTTTTCATTTGTAAG 100 54
         pnp 3361306 .. 3361323 + -14.1  -4.66163   TTCCTGACGCAAGAA             CGGCGCC CGCG GGCGCCG              TTTTTGCGTCCGCAT 100 50
LK412_RS16060 3362287 .. 3362321 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS16070 3364737 .. 3364760 +  -3.7  -3.73775   TCACATGGAAATCCT          TGGGGTCGC TGTAGC GCAGCCCCG           TTTCGTAAGGCTGCG  55 336
LK412_RS16085 3366655 .. 3366687 +   -14  -4.66318   TAGCGCCAGCCGGAC      GGCGGGCGCGCCGG ATCGC CCGGTGCGCCCGGA      TTTTCTTGCCCTGGT 100 38
        tpiA 3367535 .. 3367547 +  -5.5  -3.02074   CGCCGCAGCTTAAGT                TTCCG TTC CGGAG                TCTGTAATGTCTTTG  47 28
        secG 3368010 .. 3368039 +    -3  -4.09685   TGCTAGAATGCCCGA      CTTT--CCAGGATC TTCG GATCCTGGTCGAAG       TTTTGCAGGATGCCG  59 35
LK412_RS16100 3368196 .. 3368221 + -13.3  -4.91109   AAAGCCAGCAAAAAA         GCCCATATGCG TCAG CGCCTATGGGC          TTTTTGTCGTCCAGG 100 86
        betT 3371117 .. 3371142 +  -2.4  -3.58343   CAGGGCCCCGGCCTC         CCGGACCAGC AGTTGC GCCAGTTCGG          TTTCCCGATGCTCCG  50 123
LK412_RS16115 3373342 .. 3373380 + -12.4  -3.87994   TCCTATCGGACGCGC  CTGTCCGCGGCGTAGCG TCCGTC CGC-ACGGCGCGGGCGG   TTTGTCGGCATCACT  81 11
LK412_RS16120 NONE
LK412_RS16125 NONE
LK412_RS16130 NONE
LK412_RS16135 3377419 .. 3377454 +    -9  -3.90291   GGCGGCGCTTGAATC   CGGACCGGCGCGGCGG CCGCTA CCGTCGC-CCGG-CTG    TTTACTTCAGGAGGT  73 29
LK412_RS16140 3378523 .. 3378551 +  -2.9  -3.86015   CCACCGCACGCCGAT        GACCGCGAGTTGG TGC CCAAAGCGAGGAC        TTTGTGGGACAGATA  56 91
LK412_RS16145 3380019 .. 3380033 +  -5.6  -3.53091   GCTGCTGTTCCTCGC               GCAGCG CTT CGATGC               TTTGGCCGCACGCCT  52 374
        metC NONE
LK412_RS16165 3384090 .. 3384148 + -18.7  -4.56597   TTCCGATTCGAGCAG GTCCG-GCGCCGCGGGCG-GCGCCGGTGG TTG CGTTCGGCCCGCGCCCGCGGCGCGTGGCC TTTTTCAACGAAGAA 100 66
LK412_RS16170 NONE
LK412_RS16175 3387234 .. 3387246 +  -3.3  -3.63627   CAAGGTCCGGTCCGA                CCCCA CCG TGGCG                TTTCGCATCTGAACG  53 1
LK412_RS16200 3394632 .. 3394656 +  -5.6  -4.00042   TTGCAGCATGGGTTG         CGCGGCATGGC GCGG GCCG-GCCGCA          TTGTTTGATGGCGCG  63 63
         azu 3395346 .. 3395367 + -11.5  -2.62184   ATGTGCTCGGCCCGC           TCGACCCGC GCCT GCGGGCCGA            TGATCTCGCGAAACA  59 142
LK412_RS16235 NONE
        betT 3405949 .. 3405990 +  -9.4  -3.57144   CGCCGATCGCATCCG CGCCAGCCTGCGCGCCGAGC CCGA GCTGGGCGTGC-G-CTGCCG TTTCGGCGTGGGCGA  64 289
LK412_RS16255 3408197 .. 3408211 +  -9.2  -3.14795   CGGATGACGCGCGCC               GCGGCG CGA TGCCGC               TGTTCGTGAACCTTT  59 34
LK412_RS16260 3409190 .. 3409205 +    -6  -2.66326   CTTGCCGTCGCTGAA              CCGCTC CAGG GTGCGG               TCGATTTCCCGTTCA  45 207
LK412_RS16285 3412912 .. 3412947 + -26.4  -4.24326   GGGCCTCGTGCCCGC    GCGAAAAAAGCCGCCC TTCG GGGCGGCTTTTTTCGC     TTTTGAATCATGTTT 100 86
LK412_RS16290 NONE
LK412_RS16295 3413918 .. 3413934 +    -5  -3.05384   TGCGCGCTGAACCAC              CGGCGC GGGCG GCGCGG              TTCGATCGCGCCGCC  45 31
LK412_RS16300 NONE
LK412_RS16305 NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH NONE
        nuoI NONE
LK412_RS16335 NONE
        nuoK NONE
        nuoL NONE
LK412_RS16350 NONE
        nuoN NONE
LK412_RS16360 3428064 .. 3428080 + -13.7  -5.78622   GCCGCTTCAGCGATA              CCGCCTC CAT GAGGCGG              TTTTTTTTCGCCTAC 100 50
LK412_RS16365 3430598 .. 3430618 + -11.8  -4.98531   ACCCCGCCGTTCCGA            CGGCCTCC CGCAA GGGGGCCG            TTTTTCATTTCCGGC 100 52
LK412_RS16370 3433077 .. 3433093 + -15.1  -6.09133   GCGCAGCAGGGAAAA              CCGGCGC ATT GCGCCGG              TTTTTTTTTGGCATG 100 49
LK412_RS16375 3433925 .. 3433954 + -10.6  -2.65808   GAATTCGGCCACTTC       GCCGGCGGCCTG CCGGGT CAGGCCGACGAC        TGCGTTCTTGGCGGT  55 266
LK412_RS16395 3438441 .. 3438470 + -23.7  -3.03006   CCGTCAAGTGTTCAT       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TATGTGTGGCTTACT 100 114
        ispD NONE
        ispF 3444065 .. 3444075 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS16420 3445093 .. 3445124 +  -8.7  -3.61398   AGCTGGCGTGCGCTT      CGGCGTGGTAGCGC CCCAC GCGCT-CCACCTCG      TTCTTCGAACCCAGG  62 39
LK412_RS16435 3449652 .. 3449662 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS16440 3450701 .. 3450722 + -10.1  -3.01712   CTCTACAATCGGCAG           CGCCCGG ACGTCGAG CCGGGCG            TATTGCCGGCCGCGC  60 60
LK412_RS16445 3451844 .. 3451863 +  -4.4  -3.45571   GCCGATATCCATTGA            TGTATATA GTCA TGTATACA             TTGATATTTCCCCAC  51 162
LK412_RS16450 NONE
LK412_RS16455 NONE
LK412_RS16460 NONE
LK412_RS16465 NONE
LK412_RS16470 NONE
LK412_RS16475 NONE
LK412_RS16480 NONE
LK412_RS16485 3461115 .. 3461155 +  -3.6  -3.65046   TCGAGCGGCGGGCCG  CGCGGCGCCCGCCGCCGG CCCGT CCGGCGCCCGGCCAGGAG  TTATTACAATGACAA  54 44
LK412_RS16490 3462024 .. 3462037 +  -5.9  -2.78935   CGAACCCGTGTGCTC               GCGGT TGCC GCCGC                TATACTGGCCGATAT  46 86
LK412_RS16505 NONE
LK412_RS16510 3466624 .. 3466635 +  -5.8  -3.01712   ACGGCGGCTTCTACA                TGCC CTGA GGCA                 TGTTCAAGCCAACAC  47 18
LK412_RS16515 NONE
LK412_RS16520 3468784 .. 3468795 +  -5.8  -3.93695   TTGCGCCAGCGGATT                GACC CGCA GGTC                 TTTCTCGCTGGTGAA  63 522
LK412_RS16575 NONE
        cyaC 3484620 .. 3484639 +  -4.3  -2.71144   TTGATCTGCATGTAC            TCG-GCCA GGCCA TGGCGCGA            TCCTTCGCGGCCGTA  40 84
LK412_RS16615 3494699 .. 3494724 +  -8.9  -3.70902   CGCGAACGCAAAAAA         GCCGACACCAC GTTT GCGGTATCGGC          TTTCGCTATGCGCCC  65 63
        rplU NONE
        rpmA 3498216 .. 3498237 + -17.3  -5.45802   TCCCCGGAACGGCGA           GCCCTGCCG CACG CGGCAGGGC            TTTTTGTTTTCAGGC 100 53
        obgE NONE
        proB 3500715 .. 3500737 +  -4.1  -3.13073   ACCAACCAACATGCC           GGACAAGCC CCTCC GATTTGTCC           TGTATTCCTGACCGT  45 62
LK412_RS16660 3502429 .. 3502463 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 310
LK412_RS16670 3503771 .. 3503794 + -10.2  -4.41348   TGGAATAATGCCCCT          GCCGCGC-CCC ACC GGGCGCGCGCC          TTTATTTCAGCGAGA  88 56
LK412_RS16675 3506166 .. 3506176 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 183
LK412_RS16680 3507198 .. 3507242 + -10.6   -2.8294   ATCGGCGCCGTGTTC CCACGCGCGCAGCGGGAGCGGC AGT GCCG-TAGCGC-GCGCGTGAGG TGCTTGTGCACCATA  57 43
LK412_RS16690 3508877 .. 3508907 +  -6.2  -4.27584   GGCCGTTCCGTCTTA       GAGATTGGTAGTGG TAA TTACTTTCAATCTC       TTTTCGGTTAAACAT  70 135
LK412_RS16695 3511523 .. 3511536 +  -3.7  -3.36803   CGTTCCGGCGCGCCT               GCAGG ACCA CCGGC                TTGTCGATGCCCTTG  47 217
LK412_RS16720 NONE
LK412_RS16725 3518120 .. 3518143 +    -3  -4.17556   GATGGTGACGGCGTA          GCCGGACACG CGCG CCTGTTCGAC           TTTCTTGCGGATCTC  61 285
LK412_RS16735 3520605 .. 3520615 +  -6.8  -3.09516   ATCCACAAGGGGCGG                 CCGA TGT TCGG                 TTACATCCTGCGGCG  52 101
LK412_RS16740 NONE
LK412_RS16745 NONE
LK412_RS16750 NONE
LK412_RS16755 3525520 .. 3525530 +  -2.4  -4.41348   CGTCCCGGTGGACCC                 CGTG TAA CCCG                 TTTATTTCCCAGCCC  65 19
LK412_RS16760 3527119 .. 3527158 +  -5.7  -3.54408   GACCGCGGCTTCCAG GAGTTCGG-CGTCGCTGTC GGCC GACAGCG-CGACCGAGCAG  TTCATTTCGCTGGGA  57 197
LK412_RS16770 3528514 .. 3528524 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 121
LK412_RS16775 3529563 .. 3529584 + -10.1  -3.01712   CTCTACAATCGGCAG           CGCCCGG ACGTCGAG CCGGGCG            TATTGCCGGCCGCGC  60 60
LK412_RS16780 3530237 .. 3530288 +   -10  -2.76492   GCGGTCAAGCAATAG ACAGGGCGGC-GCGTCCGCC-GCC CATGCC GGCTGGCGGACGCGGCCGCGGGGA GTTTGCGATGAGTAC  57 26
LK412_RS16785 3530775 .. 3530802 +  -6.2  -2.79188   CGCCAGCGGATCGGG        CGTGAGCGTGCCG CGG CGGC-CGTTGGCG        TAGTTGCCTTCGATG  46 163
LK412_RS16805 NONE
LK412_RS16810 NONE
        rsmA 3538351 .. 3538389 + -10.3  -3.01712   GCGCCACCACCGGCA  CGCCGG-CGGCGCTGGC GATGCGG GCCA-CGCCGGCCGGGG  TCTTGCCGCGCAGCG  59 254
         pyk 3541275 .. 3541308 +  -5.2  -3.61398   GTTGAAGCCGTCCTT     GGCGCCGG-CGATGA AGGTC TCGTAGACCGGCACC     TTCTTCCAGGCGCCC  54 454
LK412_RS16835 3544725 .. 3544741 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 514
LK412_RS16910 NONE
LK412_RS16915 3557505 .. 3557542 +  -6.1  -2.66787   GCTGAGCGTTCGCGC   GCATCGT-CGCGCACGCC GCT GGTGGGCCCGGGCGCTGC   TCATCTCGCTGTTGC  46 36
LK412_RS16925 3558790 .. 3558805 +  -6.2  -5.00616   CTATGCTCGCATACA              CTGTAT GTCC ATACAG               TTTTTTGGGCCACAA  86 294
LK412_RS16930 3559053 .. 3559071 +    -3  -2.64155   GATACGAACGCCCCG             CCGCTACC GGG GGTGGTGA             TGCCTTTCCGCGCCC  39 7
LK412_RS16935 3559605 .. 3559627 +  -7.6  -3.63991   CGAGCGCCAACAGCA           TTAGCGGCCG CAG CGGCGGCCAA           TTCTTGAGCGTCATC  60 278
LK412_RS17055 3576094 .. 3576104 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS17115 3586732 .. 3586747 +  -4.6  -3.01712   CAGCGCAAAACCAAC              AGTGCC CTGG GGCACG               TGTTGCAGAGACCCC  45 47
LK412_RS17120 3587130 .. 3587145 +  -3.2  -3.94438   CACCCGACATCCGAA              GAAAGC ATAT GCTTGC               TATTTTGTTAGCATG  58 167
LK412_RS17135 3590335 .. 3590358 +   -21  -2.60496   GGTAAGCAAGCGCGC          GGCCGCCGCG CTGG CGCGGCGGCC           CTGTTTCAGGCCGCC 100 36
LK412_RS17170 3596703 .. 3596743 + -12.4  -2.73875   GCTGAGCGCGGGTGT CGCAGTGGCCGGCGCGCGC CCGG GCGCGCGCC-GCTTCAGGG  TCGTATTCCGAGGAA  65 36
LK412_RS17175 3598188 .. 3598217 + -15.7  -3.01712   TGGCCTGACGCACGC       GGAGGCGGCGCGCC TCA GGC-CGCCGCGTCC       TCTTCCAGCCAGGGG  77 33
LK412_RS17190 NONE
        recQ 3602642 .. 3602669 + -16.2  -3.14344   GGCGGTTGGCGATAC        GCGGCGTGCCGC GCGA GCGGCGCGCCAC         TTCGTGCGCGCCGTC  80 410
LK412_RS17205 3604491 .. 3604509 +  -6.6  -3.40403   AATGATGCTACAGGG             GGCTGCGC GAT GCGTATCC             TTGTCATCGGCGGAA  55 90
LK412_RS17210 3605614 .. 3605644 +  -6.6  -3.39784   TCCGCGCCCAGCTTG       CCGCGCATCTCCAG CAG CAGGCGCTCCGCGG       TCTTCTTGCCGATGC  55 228
LK412_RS17245 3611416 .. 3611469 +  -6.5  -3.18264   CTATTCGCGCATCAG GGCTTCGATCTCGCGCGCCTGCACCG GCA CGCCGCGGGTGA-TGAGTTCGCAGCC TTCCTCGGTCACCAG  51 50
LK412_RS17255 3614288 .. 3614312 + -14.3  -2.87132   CAGAGCACCCATCTG          CCGCATCCTGT CAT GCAGGGTGCGG          TATGTCCGACGCGCA  71 218
LK412_RS17260 3615026 .. 3615040 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 215
LK412_RS17270 3617085 .. 3617096 +  -2.2  -3.53566   TGCGGGTTTTGGCAT                CGGA CCAG TCTG                 CTTTTCTTCTTGGCT  48 224
LK412_RS17275 3618307 .. 3618345 + -18.8  -2.79831   GCGCGTCGTCAACTA   CAATCAGGCGGCGAGGCG TCG CGCCTCGCCACCTGCTGG   CTGTTTTCGGATGAC  87 58
LK412_RS17280 3619250 .. 3619282 +   -10  -3.53012   TGAGCGCGGCTTCGA     TACC-CGGCCTTATT CCGG AATCAGGCCGTGGTA      TTTGCGGCCCAGGGC  67 38
LK412_RS17290 3621719 .. 3621738 + -11.4  -3.21354   TGGATGCCGGCAGCG            TTGCGCGG CCAG CCGCGCGA             TTGCTGGCTGTATGC  66 53
LK412_RS17315 NONE
LK412_RS17320 3625837 .. 3625851 + -12.8  -4.27316   CTGCGCCAGCTTGCT               GCCCCC CAG GGGGGC               TTTTGCCTTGGGGCG  91 69
LK412_RS17325 3627598 .. 3627616 +   -11  -3.13403   CGCCTGCACCAGCAG             CGTCGGGA AGT TCTCGACG             TCTTCCTCGCCCAGC  64 190
LK412_RS17335 3628725 .. 3628735 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS17340 3629750 .. 3629775 +  -9.7  -5.00616   TCTAGCGCATTGCCC         TGCACGCCCCCC CGG GGGGGGCCT-CA         TTTTTTCCGGAAACC  95 36
LK412_RS17345 3630721 .. 3630749 + -12.3  -2.87132   TGCTCCTTGTTGCGG        TGCCGCATCGGCG CCG CCCCGGGGCGGCA        TCTATCCGCAACCAC  66 139
LK412_RS17350 3631772 .. 3631784 +  -9.1  -3.71917   AGCCTGACTAACAGG                CGACC TGG GGTCG                TTTCCGGTTTCCGGT  68 183
         dnt 3636241 .. 3636299 + -22.6   -2.5474   CGGCGGGCGCGCAGG CCTCG-CCCGATCGGCCGGCCGGGCCGCGC GAT GCGCGGCCCGGCCG-C--ATTGGGACGCGG CCTTTATTGCTTTTC 100 57
        phaP 3638315 .. 3638335 +    -9  -5.40072   GCAGAGCTGGAATTC           G-GGCCACC TTCG GGTGGCCTC            TTTTTTTGCCCAAGG 100 95
LK412_RS17395 3643151 .. 3643173 + -16.2  -3.34715   GACACCATGAGGGGC           GGCCGGCCCG GTT CGGGCCAGCC           TGTTTCCAGCACGTC  82 158
LK412_RS17455 3654213 .. 3654261 + -13.8  -3.35679   CGCCGCAGGTCGTTG CGGCCCGGCGTGCCCGGTCCGC GCCGACA GCGG-CCGGGC-CGATGGCCCG TTCTCACTGGAAGGG  77 207
LK412_RS17460 NONE
LK412_RS17465 NONE
LK412_RS17470 3657904 .. 3657953 +  -9.7  -5.07011   ACCGCATCGGCGGCG CGTATTAGGGCTGGCGGGCGTCC GTCG GGACGCCGCCCGGCCCGGGATCG TTTTTCCTTTATCTG  95 18
LK412_RS17480 3661226 .. 3661277 +  -3.6  -3.14132   TTGCACCCTTCACAG CGCGCCCGA-GCCGCGCCCGGC GGCCAGCCAG GCCGGGT-CGGCGTAGGAGGCG TTGATGCGCGAGGCC  45 125
LK412_RS17490 3663094 .. 3663110 + -13.7  -5.60993   GCGGCCCACGAAAAA              GCCCTCC AGC GGAGGGC              TTTTTTTCTGAGGCG 100 47
LK412_RS17505 NONE
LK412_RS17510 NONE
        ftsY 3671167 .. 3671192 + -20.5  -2.90496   GTTCGCGCCTGCCCG         CAACGCCGCCC GTCC GGGCGGCGTTG          TCATTTCCAGAACGG 100 46
       ribBA NONE
        ribH NONE
        nusB 3681621 .. 3681653 + -11.1  -3.72695   GCGGCGCTGACCTTC      CGCGGGCGCGCCCGC GCG GCGCGTCCGTTCGCG      TTTGCTGGCAGGAGT  73 31
        thiL NONE
LK412_RS17610 NONE
LK412_RS17615 3683867 .. 3683910 + -14.4  -3.28745   CAGGCACCCTGAGAA GTCAGCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGGGGGG TTACGTTCTTACCGC  75 119
        brkA 3690840 .. 3690863 + -19.6  -6.06723   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTTGGGAAG 100 44
LK412_RS17685 3701577 .. 3701587 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 192
LK412_RS17690 NONE
LK412_RS17695 3703540 .. 3703554 +  -3.4   -4.2828   ACTTCGCCGCCATCG               GGCAGC ACG GTCGCC               TTTTCCTGGATGCGG  67 245
LK412_RS17710 3706309 .. 3706335 +  -2.8  -5.06103   CGGGAGCAGCGCGGC         TTGTCCGGCTGC CCA GCGGTCTGGCTA         TTTTTTGCAAATTGT  79 442
LK412_RS17720 NONE
LK412_RS17725 3707075 .. 3707118 + -22.8  -2.72471   TGTCCTTCATCGCGC ACAAAACAAAATGCCCGCAA GCGA TTGCGGGCATTTTGTTTTGA ATTCTCTGGTGGCGC 100 80
LK412_RS17745 NONE
LK412_RS17750 3711950 .. 3711963 +  -5.9  -3.30474   GCCTGTTCGAGCGCT               GGCTG TAGC CGGCC                TTGCTAGTTGTGAAC  53 18
LK412_RS17775 3717668 .. 3717690 + -12.7  -4.57569   GGCGCAAAGAAAAAA          CCCCGG-CGC TTGC GCGACCGGGG           TTTTTGGGCACATCA 100 57
LK412_RS17785 3718608 .. 3718636 + -15.4  -3.72576   CGCGGCAAAGAGAAA       GCCCCGG-CAATC ATGC GATTGACCGGGGC        TTTCATGAAGGCAGG  85 46
         rnr 3721624 .. 3721649 +  -6.7  -4.08064   ATTGCACCGTAGACC         GGGCCGCAGGGC CCG GCCC-GCCGCCG         TTTTCCGGCGGCGTT  67 80
        rlmB 3722443 .. 3722465 + -12.6  -3.03124   GTAAACTCTTGCAGC           GGCGCGCCGT CGC GCCGCGCGCC           TCTTCGAACGTCCGA  67 37
LK412_RS17805 NONE
LK412_RS17810 3724530 .. 3724544 +  -3.4  -4.66537   AAGCTAGTATTGGCG               CGGCTC AGG GCGCTG               TTTTCTCTTGACAGC  71 105
LK412_RS17815 3725060 .. 3725072 +  -9.1  -3.64703   GGACGCAAAGGCAAA                TCGGC GCT GCCGA                TTTGCCTAACAAAAC  68 42
LK412_RS17820 3725294 .. 3725327 + -12.4   -5.4505   AAGCAGGCGCAATAA    CCCCG-GCGAGGGCGC ATCG GCGCAC-CGCACGGGG     TTTTTTGTTGCGCGC 100 92
LK412_RS17825 NONE
LK412_RS17830 NONE
LK412_RS17835 NONE
LK412_RS17840 NONE
LK412_RS17845 NONE
LK412_RS17850 3731697 .. 3731709 +  -4.7  -3.69068   GGACAGGCACCCTCG                CGCGG TTG CCGCC                TATTTCTTGCCGTCC  55 98
LK412_RS17870 3736177 .. 3736235 +  -4.3  -3.15544   GTGGCGCATTCCCAG --GGCAGCGCGCGGCCGGTCTGTGGGCTG GCG TAGCCCACCGTCCAGTGGCCCGCCGCCAA TTCGTCCGGGTGCCC  45 331
LK412_RS17900 NONE
LK412_RS17905 3742060 .. 3742070 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS17910 3743074 .. 3743086 +  -4.7  -3.57144   GACAGTTCACAGCTA                GCGGC CGG GGCGC                TTTGCGGCTCGGGCC  54 25
LK412_RS17920 3745458 .. 3745486 + -13.1  -3.14564   GCTCGAAGCGCTTCT        TGTCCACGCCGCC ATG GGTGGCGTAGGCA        TTCATGCGCAGCTGC  68 275
LK412_RS17950 NONE
LK412_RS17955 3750910 .. 3750936 +  -6.4  -3.87373   AAGCGGCCCTCAGTG         GGCCGAGTCGAG GGC CTTGCCGTGGCC         TTTCTGGCCGATCTG  62 50
         smc 3756020 .. 3756041 +  -2.9  -3.28447   AACCCATATTCGGAT           TTGCGCTGCC TTA GGC-GCGGGA           TATTCTCATGAGTGA  46 41
LK412_RS17970 NONE
        ligA 3759231 .. 3759260 + -19.5  -3.15663   CCCGGCAGCCGAAAA       CAAAATTGCCCGC GAAA GCGGGCAATTTTG        TTGATGGCGATGGCT 100 59
LK412_RS18000 NONE
LK412_RS18005 NONE
LK412_RS18010 3763389 .. 3763405 +  -4.3  -3.05471   CCGGATTAGGGTTGA              TCCCGGT GGG GTCGGGG              TGGTTATTTGATACT  45 131
LK412_RS18015 3764755 .. 3764778 + -19.6  -2.62735   TCTCCTGCTTCACCT          CGCACCGGCC TGAG GGCCGGTGCG           TCGTATGCGCCGTGT  93 101
LK412_RS18020 NONE
LK412_RS18025 3768035 .. 3768054 +  -7.8  -3.29461   CCGCGACATGGCCCG            CGCCGTCG AGCA TGATGGCG             TTGTCGAAGCCCTTG  55 392
        pncB 3779845 .. 3779862 + -14.1  -4.17048   GGTGTTCCAGCTTCC             GCCGGCC TGAG GGCCGGC              TTGTTTTCGCCAACC  91 16
LK412_RS18095 3780345 .. 3780384 +   -18  -4.08945   CGCGCCTCGGGACGG  TACAGGCATTGCGGCATC GGCC GATGCCGCAATGCCTTCA   TTTTGCCGGGATGGT 100 114
LK412_RS18110 3784090 .. 3784104 +  -4.2  -4.09685   CGGGGGCGGCCGCGT               GCCCTA CAC TAGGTC               TTTTGCACGCTCCGG  61 64
        argE NONE
        trpB NONE
        trpA NONE
        accD 3788385 .. 3788416 + -10.8  -4.67353   CCCGCCGGCAGTGCC      TGCGAACGCCCGGC CCAG GCCGGGCGTTGTTA       TTTTTCCATGCATGC 100 46
LK412_RS18140 3790369 .. 3790422 + -13.7  -3.68359   CCCTTGCCGCAGCGG GGACAATTGGCGGGTGCCAGTCCCC CTGC GGGGACAGGCACCCGAGGAGTGGTC TTATGATTTTCCGGC  80 86
LK412_RS18145 3791533 .. 3791559 + -23.8  -3.92869   GCACAGCAGGAAAAA         GCGGGTTGCGGC GCT GCCGCAACCCGC         TTTGTGCGTCAGTGA 100 66
LK412_RS18155 3796167 .. 3796179 +  -4.1  -3.42809   CAACTGGAGACGGCC                TGACC ATG GGTTA                TTCGTTGGTGGTATT  49 23
LK412_RS18160 3796893 .. 3796950 + -15.6  -3.27408   CTGTCTTACCTGGAT CGGCGCCATGCG-CGCGCTG--CCGTCGC CCG GCGACGGAATAGCGCGGCGCACGCCACCG TCTATTTGGGTAAGA  80 75
        msrP 3797936 .. 3797952 +  -2.1  -3.16564   AGCCTCTACCAGGGC              CTGGACC TGC GGGCCAA              TTACTGAGGTCCCCA  42 2
        msrQ 3798795 .. 3798829 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS18180 3801003 .. 3801034 +  -5.1  -4.03234   TCAGGTCGCGCACCA      GCTG-CGCCAGC CTGGCGGCC GCGGGCGTCAGC      TTTCTATGCCGCAAC  63 77
LK412_RS18190 NONE
LK412_RS18195 3803943 .. 3803992 + -13.5  -3.96148   GCCAGGCCACCGACG TGGC-CGCCC-GCGCCGCGGGCG AAAAGC TGGCCGCGGCGCTGGGCCAGCCG TTTATCGTGGAAAAC  84 219
LK412_RS18210 3806389 .. 3806434 + -10.4  -3.05384   CTCATTCTTATATAA TGCGTCACGCGCTACTATTC GCCCAA GTTAAGTAGCGCGTCACGCA TTACATGGGCAAGGG  60 117
LK412_RS18215 3809839 .. 3809849 +  -3.2  -3.59979   AATCCTATTCTTGCC                 TTCC TCA GGAG                 TTTGCCATGCCCAAC  49 39
LK412_RS18220 NONE
        pruA NONE
LK412_RS18230 3814060 .. 3814073 +  -5.9  -3.34947   TCGCCGCATGCGTGC               CTGGC TGAT GCCGG                TTGTGGGCCTTGTTG  52 384
LK412_RS18240 3814902 .. 3814936 + -22.3  -3.53012   CTAGGCGCGCTGCCC    G-CAAAGGCCGCCCGG CATG CCGGGCGGCCTTTGTC     TTTGGCGCAACGCAG 100 42
LK412_RS18245 3816001 .. 3816011 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS18250 3816994 .. 3817033 +  -9.4   -3.5361   CCTGGACAAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
LK412_RS18255 NONE
LK412_RS19940 NONE
LK412_RS19945 3819860 .. 3819871 +  -7.2  -2.52464   CTCAGGCGCGCTCGA                CGGC GATC GCCG                 TCGCTTCGCCGCCGC  47 88
LK412_RS18285 3824833 .. 3824863 + -12.5  -3.29144   TTGCACGACGCCCCC       GGCCACGTCGGCC AGCGC GGCCGACGTACCC       TTGTACGGCACGTGG  70 423
LK412_RS18310 3829427 .. 3829437 +  -6.8  -3.51825   CCATCGACGCCGCCA                 TGCG GAA CGCA                 TTCTCGTTCGAGTCC  58 378
LK412_RS18320 3832327 .. 3832339 +  -6.2  -3.60792   ACTTTCCACAGATCC                CGCC TGTCC GGCG                TTTCACCATTCGAGG  56 89
LK412_RS18325 3832728 .. 3832748 +  -2.5  -3.13906   GTCAAGGGCGGGTCT           CCC-CCGG GGTGCG TCGGCGGG            TGGTTTTCCGTTAGC  42 46
LK412_RS18330 3833292 .. 3833317 + -18.3  -5.42862   CCCGGCGCCGTACAC         GCCCCGCCGGCC GCA GGCCG-CGGGGC         TTTTTTTCGGCCTGT 100 51
        dnaQ 3838384 .. 3838401 +  -3.3  -3.08464   TTTCGTGCTAGAATT             TCGCCTC TTTC GGGGTGG              TTAGCTCAGTGGTAG  44 73
LK412_RS18355 3838479 .. 3838513 + -19.5  -3.54489   CCCACCAGCATCCCA    GAAGGGCCGGTCGCTT GCAA AAGC-ACCGGCCCTTC     TTCATTTCCGCTTCC 100 34
LK412_RS18360 3839001 .. 3839027 + -11.5  -2.78384   GCTGTCTGTGCGCAT         CCCCGGGCCTG TGCGC CAGGCCTGGGC         TATCGTCGAACAACG  62 101
LK412_RS18365 3840432 .. 3840477 +  -7.4  -3.86822   GAGCTTCTTCTAGCC CGGCGCCAGCCGCCTACCTGCC CTCG GGCAGG--GGCGGCGCGCCCAG TTTCTCGAAGGCTTC  66 28
LK412_RS18390 NONE
LK412_RS18395 NONE
LK412_RS18405 NONE
LK412_RS18410 3849527 .. 3849564 + -14.7  -3.15699   CCTGGCGGCCGGCAT   AGCCGCGGCCGGCGTCG CGTA CGAAGTCGGCCACGGCA    TCTTCATAGATGCGT  77 87
LK412_RS18430 3853109 .. 3853136 +  -3.9  -2.78996   GCAGCGGCGGTTCGC        GGGACGGCGCG CGCAGA CGGGCCTGCCC         ATTTCGATCAGGATG  41 41
LK412_RS18435 3854177 .. 3854215 +   -13  -3.52093   ATGGCCCGCCCGCAA   TCCGCGGCGCCGGATGCA ATA TGGGCCGGGTGCCGCGGA   TTATGGTTCCAATAT  77 53
LK412_RS18440 NONE
LK412_RS18445 NONE
LK412_RS18450 3857912 .. 3857922 +  -5.4  -2.94924   GTACAAGGAATGAGC                 CTCT GGT AGAG                 CTTTCTCCATCCAGG  47 28
LK412_RS18455 NONE
LK412_RS18460 3860583 .. 3860611 + -11.7  -3.81755   AAGCCGGCGCCCGTC        CCTGGGTGTTCAC ATC GTGAACACCCTGC        TTCTGTTTCACGCGT  79 59
LK412_RS18465 NONE
LK412_RS18470 NONE
LK412_RS18475 3863881 .. 3863897 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  60 494
LK412_RS18490 3866542 .. 3866566 +  -2.7  -3.05816   CCTTAGGCGCGCGGC          ATGGCAATCGC GTT GTGATCGCCGG          TTCGATCACAGATAC  42 79
LK412_RS18495 NONE
LK412_RS18500 NONE
LK412_RS18505 NONE
LK412_RS18510 NONE
LK412_RS18515 3871310 .. 3871366 +  -6.6  -3.14051   TACCCGCCGGGCGTG CCCGACCATTCGACCGGCGGCGCGGT CGTGCGT ATCGTGCCTTCGGTGGGATG--CGGG TGTTCCTGGAAATAA  50 237
LK412_RS18535 3874748 .. 3874758 +  -3.2  -2.78816   CCCGCCGCCAAACCC                 CGTC AGC GATG                 TGTCATGGCCGATGA  40 151
LK412_RS18550 NONE
LK412_RS18555 NONE
LK412_RS18560 NONE
LK412_RS18565 3878968 .. 3878980 +  -3.3   -3.6968   GGCGGCTTCCAGTTC                GCGGA ACT TCAGC                TTCTTGGGGTTCTCG  55 436
        argB NONE
LK412_RS18580 NONE
        slmA NONE
LK412_RS18590 NONE
LK412_RS18595 NONE
        gatC NONE
        gatA NONE
        gatB 3894355 .. 3894373 + -10.2  -2.62515   AGCACCGCGGCGGGC             TCGGCGCC GGC GGCGCGGA             TGATCTCGACCGATT  55 359
LK412_RS18645 3896023 .. 3896034 +  -7.2  -4.25104   AGCACTGGTTTTGCG                GCCG ATTC CGGC                 TTTTCGTCCGACGAA  72 313
        gdhA 3897789 .. 3897818 +   -18  -3.93262   CGCACCCGGTGATCA       TGCCGCTGACCA GCACGA TGGTCAGCGGCA        TTTCCATTTGTTGGG 100 313
LK412_RS18660 3899161 .. 3899171 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
LK412_RS18665 3900435 .. 3900478 + -11.6  -3.15544   TGACGAACAGATGGC GGCCGTCGCCCTGCGCGCG GAACGCA TGCGCGCCGG-CGCCGGTC TTGATGCGCCTGACC  64 285
LK412_RS18705 NONE
LK412_RS18710 3909548 .. 3909558 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 73
LK412_RS18715 3910735 .. 3910779 +    -4  -2.78463   CTTTGGCGTCCAGGC CGGTATCCGGCGCGGCCAGC ACCAG GTCGCCCGCTTCGGACAGCG TCTGCTCGCGCCACT  40 198
LK412_RS18740 3913039 .. 3913073 +    -4   -4.9792   GCGGGCCGTCGGCGC     TGGCGCGCCGGCAGGC ACC GGTTGCATGCGCGCGG     TTTTTATCTAAAATG  79 115
LK412_RS18745 NONE
LK412_RS18750 3914680 .. 3914693 +  -2.3  -2.64616   GTCATCGACAGCACA               AGCAC GCTC GTGCC                TGCTCTCGATGGGAA  38 120
LK412_RS18755 NONE
LK412_RS18760 NONE
LK412_RS18765 3919313 .. 3919365 + -16.2  -3.05844   CTGCTGCTGGCGCTG GGCGCTGCCCTGCTGGCGGTGG GCATTCTCG CCGCCGCCAGCGGCGCGGTGCA TATTCCGCTGGCCGA  79 60
LK412_RS18770 NONE
LK412_RS18775 3921058 .. 3921083 + -11.9  -3.57144   GGCCGCCTGCTGGTG         CTGGCGCGCTGA ACC TCAG-GCGCCGG         TTTCGAGGTGGCGCA  72 14
LK412_RS18785 NONE
        alkB 3923083 .. 3923099 +  -9.3  -2.52464   GCATCAACTTCACGC              TGCGCCG CGC CGGCGCC              TGAATTCGGCCGCAA  54 6
LK412_RS18795 3923704 .. 3923714 +  -8.2  -3.53012   GCTGTTGCGCGAGGC                 CGGC TGA GCCG                 TTTGCAACGCCGGCA  62 19
LK412_RS18800 3925268 .. 3925285 + -12.7  -3.06915   CGTCGCGATGCTCGG             GCCGGCT GACC AGCCGGC              TTGCGTAGCGTCCCT  66 346
LK412_RS18825 NONE
LK412_RS18830 3929406 .. 3929420 +  -8.5  -2.56596   AGTAAACAGACAGCG               CGCGG CCGAC CCGCG               TAGATTGCTCCCGAC  52 64
LK412_RS18835 NONE
LK412_RS18840 NONE
LK412_RS18845 NONE
LK412_RS18850 NONE
LK412_RS18855 3934315 .. 3934349 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        mtgA 3935970 .. 3935993 +    -3  -5.09204   TGCGGGCCCCGGTTA          CCCGG-GGCTG CGC CAACCGCCGCG          TTTTTGTTAACCTGT  79 48
        lptG NONE
LK412_RS18875 3938537 .. 3938549 +  -4.7  -3.01712   CCGATGACCGGCCAG                GCGCG GAT CTCGC                TCTTGGCCACGAACG  46 510
LK412_RS18910 NONE
        thiE NONE
        hemL 3945274 .. 3945312 + -10.2  -5.80951   GCCGCGACGGGCAGG   GCCCGGCCCATCGGATTG TTA CGATCCGATGGGCTTCAC   TTTTTTGTTTTGGAT 100 45
LK412_RS18925 3947610 .. 3947622 +  -2.7  -2.80074   GGCGGTTGCAGAATT                TTCAT GTC ATGGA                TCCTCTTGTAAAAAC  39 516
LK412_RS18990 NONE
LK412_RS18995 3961438 .. 3961454 +  -9.3   -2.7185   CAGGCCGGCCACGCC              GGCGCCG GCC CGGCGCA              TAATTCCACCATGAT  55 41
LK412_RS19000 3962629 .. 3962663 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
LK412_RS19010 3963803 .. 3963818 + -11.8   -5.4505   GAAGCCGACCTTCCA              GCCGCC TCCG GGCGGC               TTTTTTGTTGGCCAA 100 42
LK412_RS19015 NONE
LK412_RS19020 3965742 .. 3965765 +  -3.1  -3.51934   TGCGGGTGGCGTTGA          TCGGGGCCGG CAAGT TCGGCT-CGA          TGTTTCTCAGCCAGG  49 219
LK412_RS19035 NONE
LK412_RS19050 3973321 .. 3973351 +  -8.8  -2.66316   GTGAAGGCGCCCGGG       CTGCCGTAGCCCAG GTC CAGCGCCACGGCGG       TGATCTGCTCGCCGC  51 151
LK412_RS19060 NONE
LK412_RS19065 NONE
LK412_RS19070 NONE
LK412_RS19075 3978493 .. 3978503 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS19080 3979830 .. 3979858 +    -6  -3.08679   CGATGCCGAACCAGC       CA-CG-CCGCACGG CGC CCGTGCGCACGATG       TCTTCCATCACGCGG  48 348
LK412_RS19090 3981559 .. 3981585 +  -7.9  -3.23853   GTGACATCTTCCGGC        GGC-GCGGCGGG CGCT TCCGGCGCGGCC         TCTTCCTTGCGGCGG  53 114
        petA NONE
LK412_RS19105 NONE
LK412_RS19110 3985153 .. 3985184 + -18.8  -3.94846   CCGCCTGGCAATCGG      GGCCAGCGCCTGCTA ATT TGGC-GGCGCTGGCC      TTTCGCTTTTCATAC 100 123
LK412_RS19115 NONE
LK412_RS19120 3986332 .. 3986356 + -17.2  -3.16191   TACAATGCAGTCCCT          CGCAAGCGGC CATGC GCCGCTTGCG          TTCATGCCGGTGTAG  84 73
LK412_RS19125 3986456 .. 3986476 + -13.3  -5.07011   AAATCAACGATCTAG            GCCGTTTCC TCT GGAGACGGC            TTTTTCGTTTATGTA 100 44
LK412_RS19140 3988687 .. 3988726 +  -8.6  -3.02144   TTGAAACCATCCAGG  CTGGGCGTCTGGTACAGCA CCA TGTTGT-CCAGGCGCATGG  TGTTGGCGGCGCTGA  55 372
LK412_RS19210 NONE
LK412_RS19215 4002789 .. 4002839 + -13.4  -2.53876   AGCGCCAGGCCTTCG CGGCG-CG-GATCGGCGCCGC-CGGC CAG GCCGTGCGGC-CCGATCACGATGCCC TGGATTCCGCTGGGA  67 58
LK412_RS19225 4005545 .. 4005560 + -11.8  -3.57144   GCGCGCAAGAAAAAA              GCGCCC CGCG GGGCGC               TTTCGGCGTGCACGG  72 46
LK412_RS19235 4007695 .. 4007717 + -12.7  -3.24747   CCCAACTGACGCGCC          CG-GCGCCGC TCTA GCGGCGCGCG           TTGGTCATGTCGCCC  71 32
LK412_RS19245 NONE
LK412_RS19250 4011202 .. 4011239 +    -9  -3.35679   ACAGGCACCCTTGCC   GCGGGTGTCGCTCCTC CCCAAC GGGGACGGGCGCCCGC    TTCTCACTGCCCGCG  63 127
        mutL NONE
        miaA 4014800 .. 4014829 + -23.7  -2.78816   TGCCCGACTGAGCAA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TGTCATACGCCATGA 100 30
         hda NONE
LK412_RS19280 NONE
        pcnB NONE
LK412_RS19290 4019607 .. 4019620 +  -4.5  -3.38326   GCCGGCGTGTTCAGC               GCG-CG CGC CGACGC               TTCGTTCAGCTTCTG  49 189
LK412_RS19310 4025162 .. 4025193 + -15.9  -3.76413   CGCAGGCCGTCCAAT      GGTGTCCGGTGCG CTCGCA CGCACCGGATGCC       TTTCCCATTTTGCAA  90 42
LK412_RS19315 4026164 .. 4026174 +  -2.4  -3.29144   CCAGTTCGAGCGCCA                 GGCC CAG GTCC                 TTGTGCGCCAGGTCG  44 257
LK412_RS19335 4029146 .. 4029156 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
LK412_RS19340 4030263 .. 4030277 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 128
        thiC 4036196 .. 4036210 +  -8.5  -3.02263   GCCATGCGGGTCAGG               CCGCC GTGTA GGCGG               TCTTGACCGAGGTGT  55 72
LK412_RS19385 4041398 .. 4041447 +  -9.8  -2.82015   GCGATGCCTACCGGC GCCGCGTCGGCCGCGCCAAGCGGG AAAA TCCGC--GGCGCCGCCGTCGCCGA TATGCTGCCTATGGC  56 396
LK412_RS19395 4042997 .. 4043009 +  -2.6  -3.55444   CGGCAGTCCGGGTAC                CCGG AAAAA TCGG                TTTCGCACATGCCGC  50 368
         ppc 4046638 .. 4046666 +  -2.3  -4.92756   CCCGGAAGCCTCCCA        ACATTTTGAGGCG CTG CGTCCCAGGATGA        TTTGTTTTTGATCAT  76 237
       sphB1 4049901 .. 4049930 + -23.7  -2.78816   CGACACCAGCGGCAA       GAGCGCCTGTCCC CACG GGGACAGGCGCTC        TGTCATGCGCCATGA 100 111
LK412_RS19415 NONE
LK412_RS19420 4052665 .. 4052678 +  -3.7  -3.33696   GTTACCTGACCCACT               GACGC CGCC GCGCC                TTCCTTACGGAGCCC  47 24
LK412_RS19425 4053459 .. 4053492 + -12.4  -2.82519   CGCCTGCTCGCGCAT    CGCGC-GC-GCGCCGC CTCA GCGGCGCCGCAGCGCC     TGGTTGATGTGCTCG  66 61
LK412_RS19435 NONE
LK412_RS19440 4055797 .. 4055817 + -19.7  -4.11216   CTGAACGCCCATTGC            GCCCCGGCC GGC GGCCGGGGC            TTTTACCGATCGAAG 100 37
        catC NONE
LK412_RS19450 NONE
        pcaD NONE
LK412_RS19460 4058595 .. 4058607 +  -4.7  -3.73068   CTCGTCGCCGGTCTT                GCCGG TTG CCGAC                TTGTTGCATTCGGCC  58 310
LK412_RS19490 4063669 .. 4063679 +  -8.2  -3.28712   ACACCAGGTTGCGGT                 CGCC ATA GGCG                 TTGTCCACCCGCGCC  59 217
LK412_RS19540 NONE
LK412_RS19545 NONE
LK412_RS19550 4077196 .. 4077208 +  -4.8  -3.41051   GACATCGCCCTTGAA                GTCG ACGAA CGAC                TTCTCGTCGAACTGC  52 372
LK412_RS19575 4084544 .. 4084573 + -13.5   -4.2828   CCCGCCGGCCCCTGC       AGCGCCGCCGTGGC ACG GCC-TGGCGGCGCG       TTTTCATGCCTGAGC  91 50
        metG 4086856 .. 4086882 + -20.8  -3.55444   GCGCTGAGCGCGCCG         CCGCCGGCCCGC CAC GCGGGCCGGCCG         TTTCAGGCCTGCGGC 100 34
LK412_RS19605 4090399 .. 4090433 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
         bfr 4091901 .. 4091922 + -17.3  -3.75629   CCATGGCATGAAAAA           GGGCGCACC ATGC GGTGCGCCC            TTTGCATTGCGGCTG  91 63
LK412_RS19640 NONE
LK412_RS19645 4098299 .. 4098310 +  -3.6  -3.55622   GCGTGAACAGGGTCT                CGGT GGCC GCCG                 TTTCCAGCAGTTGGC  51 130
LK412_RS19660 4100890 .. 4100947 +  -2.7  -4.11484   TCCGACAGCTTGCTG CCGTCGAAGTCGTCCCATGGGATATCGG ACG CC-ATATTCCAGCGCACCGCTTCCATGG TTTTGAAGAGTTCAG  59 327
        phoB NONE
        phoR NONE
LK412_RS19700 NONE
LK412_RS19705 4109832 .. 4109859 +  -2.7  -2.66316   ACAAACGCGTAATCC       GGGCGACAGACTG AGGT CAGTCC--CGCCC        TGCTATCGTCGGCCG  39 12
LK412_RS19710 4110482 .. 4110494 +  -7.7  -3.78934   GTCCACAATGGGGGG                GGGTT TTC AACCC                TTGTTGTACAGGCAA  66 95
        serA 4111972 .. 4111987 +  -3.2  -3.73775   CCGTGGCGCACCAGG              TTGGCG ATGG CGTCGA               TTTCGTCGAGCTCGA  55 282
LK412_RS19725 NONE
        pxpB NONE
LK412_RS19735 4115375 .. 4115397 +    -9  -3.01712   CGCTGCCCGCGCCAT           CGGCCTGCGC GCG GCGCAGGAAG           TCTTCGCCGACCGGA  57 495
LK412_RS19750 4117630 .. 4117642 +  -5.5  -3.01712   CTATGCGAGTCATCA                TCGCA GGA TGCGG                TATTGGCGGCGCCGC  47 111
LK412_RS19760 4119767 .. 4119779 +  -4.7  -4.41616   TCGCGCGGATACGGC                GCGAC TGG GACGC                TTTCTTTGGCGCCGT  69 122
LK412_RS19765 NONE
LK412_RS19770 4121915 .. 4121956 +  -9.2  -3.72027   GGCCTACGCGACGCG CAGGCGGTCGTCGCCCGGC TCGTC GCCG-GCGTCGCCCGCCCA TTGTTCGTAGGCGCT  68 125
LK412_RS19775 4121900 .. 4121920 -  -8.9  -3.96148   TGTCGTGAGGAGAAA            GGCCTACGC GAC GCGCAGGCG            GTCGTCGCCCGGCTC  70 8
LK412_RS19745 4115154 .. 4115187 -  -7.4   -3.1505   ATCACCCCGCAGGAA     GC-CTACGACCTGGT GGTCT ACCAGGTCGGCGCGC     TGGCCGGCGTGGCCG  54 510
LK412_RS19720 4111397 .. 4111418 -  -6.5  -4.28361   GGAATCCCAGGAAAA           CATCGGCCGC GAA GTGGCCGA-G           AAACTGGTGCGCTTC  72 374
        ubiE 4104647 .. 4104662 - -11.8  -3.53811   GGGAGCGGCTGGAAA              GGCCCC GGTT GGGGCC               TGCGCGGCAAACCTT  72 121
LK412_RS19680 4103465 .. 4103492 - -19.2  -3.30007   AAGACCGGCCCATAA        GCGAACCGGCCC TGGC GGGCCGGTTCAC         GGTGCAGCCCGGCCG 100 103
LK412_RS19675 NONE
        ubiB 4100810 .. 4100842 -  -4.8  -3.13403   TGTCGCGCAGGAACA     TC-TCG-GTGGCCGGC AAG GCCGCCCACTCGGTGA     TCGCGTTCATCTTGA  47 330
LK412_RS19650 4097721 .. 4097767 - -10.7  -3.41693   CGCATCATCAATGAA TACATCGTGCCGCGCCTG-CGC GCCG GCGACTGGCCCGGCGCGGTGCA GGCCGGCGTCACGGC  69 459
LK412_RS19635 NONE
LK412_RS19630 NONE
LK412_RS19625 NONE
LK412_RS19620 4091901 .. 4091922 - -17.3   -4.7373   CCATGGCATGAAAAA           GGGCGCACC ATGC GGTGCGCCC            TTTGCATTGCGGCTG 100 48
LK412_RS19610 4090019 .. 4090036 -  -6.3  -3.05844   CGCCCGAGCGCAAGA             TCAGCCGC GAG GCG-CTGA             TCGCCGACGACCTGT  48 219
LK412_RS19600 4089300 .. 4089315 -  -3.3  -3.91676   TCACAAATGAAAACA              TGCAT GTTTAA ATGCA               ACATTGGTGCCGCGT  58 112
LK412_RS19595 4088498 .. 4088508 -  -6.8  -2.62735   AGATTGCGGACATGA                 CAGG ACT CCTG                 GGAACCGGCGGCCCA  47 104
LK412_RS19590 4087664 .. 4087696 -  -2.6  -3.92324   GGGCGTAATAGTAAA     CAGCCCCGCCAAGGCG CTA CGGCGC-G-GGGGCTG     GACGCGGCGCCGCCA  56 9
LK412_RS19585 4086731 .. 4086775 -  -8.3  -3.92324   CCGCGCAAGATGAAA TTCGGCGTGTCCGAGGGCATG GTG CTGGCCGCCAGCCACGCCGAC GAGAAGGCCGAACCC  70 135
        apbC 4083047 .. 4083064 -  -3.3  -3.14125   GGCAGACACGCAATA             TCCGACG CATG CGTCAGG              CGGGCCGGACCACCA  44 21
LK412_RS19565 NONE
LK412_RS19560 4077445 .. 4077457 -  -7.7  -3.37344   CCTCGATTGAATGAA                GGGTA TTC TACCC                GCCGCCGGCCGCCGC  59 49
         dcd 4076645 .. 4076666 -  -6.5  -3.25823   TTCCCGCTACATGAA           GCAGCCCGAC GAG GTCGG-CGGC           GTGGAGACGCAAAGC  52 216
LK412_RS19535 4074802 .. 4074830 -    -8  -5.24129   GCTGGTGACAAAAAA        GCAACCGGCCCG ACGAG CGGGCCGACCTC        GGGGAATTGTAGGAC  95 76
LK412_RS19530 4072408 .. 4072447 - -33.6  -3.65812   CTCCCTCGAAGACAA  CGCCGCGCCGGGCCGCCC CCTC GGGCGGCGCGGCGCGGCG   CGTCGGATTTACTGC 100 34
LK412_RS19525 4071130 .. 4071140 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS19520 4070053 .. 4070069 -  -2.3  -3.35597   TGCATTTGGTAAAGA              CAAATGA TAG TCATTTC              CATTTACCAAAACAA  46 19
LK412_RS19515 NONE
LK412_RS19510 4068458 .. 4068473 -    -6  -3.55444   GCGCCATGCCGCAAA              GCGTCC GGAT GGGCGC               CGATCCGCCCCTGTT  56 49
        gcvT 4066957 .. 4066980 -  -7.4  -3.97368   GTGGGAATGGAGAAA          GTTTGCGCGCC TCC GGCG-GCCAAC          GGCCGCGCGGAAGCC  68 47
        gcvH 4066503 .. 4066523 -  -8.1  -3.90744   GTTTTCTCGAAATAA            CGGGGAGGC GGG GCCGGCCCG            CGGGCCGGCCCGTTG  68 48
        gcvP 4063558 .. 4063603 -    -9  -3.75665   GCAGACGCCATGAAA TCTTG-C-AGGTGCCAGTCCCC ATGG GGGGACAGGCACCTCGTCATGC GCCATGAGCGCGCAC  68 44
LK412_RS19485 NONE
LK412_RS19480 NONE
LK412_RS19475 4059899 .. 4059909 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS19470 4058831 .. 4058866 -  -3.2  -3.56568   CAATGATCTGCCAAA    CCGATGCGCGTAGCAAG TTC CCTGCTG-GCGCATTGC    GGCACAAGTGGCCAC  49 54
LK412_RS19465 4057948 .. 4057959 -  -7.2  -3.60098   ACCGGCTACGCCAAA                GCCG TGGT CGGC                 ATGAACGGCAAGCCC  60 481
LK412_RS19430 4053133 .. 4053147 -  -4.2  -3.72893   TATTCGGCGACCAAA               GCCG GGCTGAT CGGC               CTGACGCGCACCCTG  55 352
        queC 4042579 .. 4042592 -  -4.5  -2.82623   GGTGGGCTACAAGCA               CG-GCC AAT GGCGCG               ACACCGTCCTGATGC  44 126
LK412_RS19390 4041027 .. 4041061 -  -8.4  -2.84298   GACAGTTCACAACTA     GCGCAACGCAGGCCGG GCG CCAGGCTCAGTCGCGC     GGCGATGCCTGGAGG  54 16
LK412_RS19380 NONE
LK412_RS19375 4037658 .. 4037679 - -18.7  -3.41051   CTACGGGTAGGACAA           CGGGCGCCC CAAG GGGCGCCCG            GCACAGCAAAGTCGT  93 80
LK412_RS19370 4036071 .. 4036093 -    -4  -4.18018   GGGCGTCAGCGAAAA           GGACGCGCTG CAG CAGGGCATGC           AGGAAAAGGCGGTGG  63 123
LK412_RS19360 4033293 .. 4033312 -  -5.6   -4.7497   CCCATCCATGAAAAA            GGCAGCCC CGCA AGGCTGTC             CCGGTTGCGCCGGCC  81 64
LK412_RS19355 4032198 .. 4032208 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 76
LK412_RS19350 4031173 .. 4031218 - -13.5  -3.14132   TCCGGCCTGGATGAA CAACCTATTGAGACATCACAG CTAG CTGTGAACTGTCAATAGGTTG TATTCGTCCAGGTTG  72 1
LK412_RS19345 4029957 .. 4029991 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS19325 4026626 .. 4026664 -  -7.3  -3.14229   ACATGTTGATGAACA  GCG-CGCCCGGGCCCATGC CCT GCA-GGGCGCCGTCGGCGC  CTTCGAGCGCCGCCT  52 315
LK412_RS19305 4021469 .. 4021487 - -11.6  -3.04144   CGGCCAGCGCGAACA             GGGCCGGC GCC GCCGGCGC             CGTGGGATGGATGAT  65 367
LK412_RS19295 4019419 .. 4019466 - -10.4  -3.01712   GGCCGCGCTGGAAGA CCAGGCCA-TCGAGCCGCTGCGC TGA GGGCAGCGGCTCCCCTGGTCAGG GCTGCAGATTGCCTT  60 21
        purM 4014800 .. 4014829 - -23.7  -3.18264   TGCCCGACTGAGCAA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TGTCATACGCCATGA 100 97
LK412_RS19255 4011167 .. 4011196 - -23.7  -2.62616   CGATGGCGTACAGCA       GGGTGCCTGTCCC GGCT GGGACAGGCACCC        TTGCCGCGGGTGTCG 100 72
        fumC 4007689 .. 4007701 -  -4.7  -2.52464   GGCGCGCCCAACTGA                CGCGC CCG GCGCC                GCTCTAGCGGCGCGC  42 29
LK412_RS19230 4005545 .. 4005560 - -11.8   -5.4505   GCGCGCAAGAAAAAA              GCGCCC CGCG GGGCGC               TTTCGGCGTGCACGG 100 54
         ggt 4002356 .. 4002375 -  -5.6  -4.36914   TCGCGCCGTATAAAA            CCCTGC-CC ACC GGCGCCGGG            CCGATCTTCCTGGCG  69 414
LK412_RS19200 NONE
LK412_RS19195 3998524 .. 3998541 - -14.1  -3.84451   TTGCGCAAACGCAAA             CGCCGCC TGAC GGCGGCG              TTTTCCTGGTTCGAC  83 55
LK412_RS19190 NONE
LK412_RS19185 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC 3991394 .. 3991431 -  -2.7  -2.71041   AAGGCGAACTATAAC   CGC-GCGCCGATGC TTAGGCCAGTC ACATGGGCGCGGCG   CGGTGCAGCCGGCCT  40 10
LK412_RS19160 3990647 .. 3990673 -  -8.7  -2.84812   AGCGACAGCATGACA        CGCGCCATCAGG CAGG CCTGGTG-CGCG         TGCTGCCCGATTGGG  54 157
LK412_RS19150 3989201 .. 3989242 -  -7.9  -4.18488   ACGGATGGCAAGAAA GACA-TGCGCCTGGCGCAGC CAT GCTGCGCGCGAAGCACTGCC CACAGTGTCCGGCCG  74 167
LK412_RS19135 NONE
LK412_RS19130 3986298 .. 3986310 -  -3.3  -3.34517   AGCCTGTCCGAAAGA                CTGCG GCG CGAAG                TTTCACTACAATGCA  46 518
        mscL 3981029 .. 3981041 -  -6.2  -3.63569   GCAATGGGGCAACAA                CGCC CAGCT GGCG                CGCGTGCTGGGCCTG  57 479
LK412_RS19085 3979304 .. 3979338 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS19055 3972941 .. 3972967 - -12.3  -2.58544   GTGCACCCGCACAAT        GACCGCGG-CAC CGCC GTGGCCGCGGCC         GAGCTGGCGGTGCTG  62 285
LK412_RS19045 3971281 .. 3971324 -  -8.1  -3.33814   AAACGCTAGATAATA CGCCGGATCCG-GGCA-CGACG CCC CGCCGGCGCCTCAGG-CCGGCG GCTCGCGCCGCGCCG  56 15
        ilvD 3969200 .. 3969226 - -11.5  -2.74488   CAACGACGCGAATCA        GCGCGCGCCGGC GCTG GCCG-CGCGGGC         CTGTGAATCAGGACA  62 176
LK412_RS19030 3966666 .. 3966685 -  -7.8  -3.35679   TTCGGCCATGTACAA            GCCCTATC ACCT GATCGGGC             TGGAGCTGGGCATCA  59 391
LK412_RS19005 3962110 .. 3962141 - -10.1  -3.05384   CTGCTGCGCACCGAA      GGCAGC-GACCCGC TGGAC GTGGGCCGGCTGCC      GCTGCTCAAGGTGGA  59 344
LK412_RS18985 NONE
LK412_RS18980 NONE
LK412_RS18975 NONE
LK412_RS18970 NONE
LK412_RS18965 3955106 .. 3955133 -  -9.1  -4.07568   GTGCCGTCCCCAAAA        GCGCTGCGCCGG ACAGG CCGGCGCAG-GA        AGGAAGACTTCGGGA  75 56
LK412_RS18950 NONE
LK412_RS18945 NONE
LK412_RS18940 NONE
LK412_RS18935 NONE
LK412_RS18930 3946884 .. 3946902 -  -3.1   -3.4247   AGAACGTCAACAACA            TGAGCGAG CGCG CCCGC-CA             GACGCACGCCAAGAT  47 336
LK412_RS18905 NONE
LK412_RS18900 NONE
        ruvX NONE
LK412_RS18890 3939678 .. 3939708 -  -8.9  -4.07568   GCCGGCCTGGGAAAA      GGCCACGC-AGCCG GCCT CGGCCAGGGCGGCC       ATCTCGCTGAGCCGT  72 438
LK412_RS18880 3938054 .. 3938090 - -16.4  -3.06831   CCAACGGCGACTGAA    CGCCGCCGCGGGCGGC CACGC GCCGCCCGGGCCGGCT    ACAGCTCGCCGGCGA  79 24
LK412_RS18860 3933739 .. 3933763 -   -15  -3.16492   GGATAGCCAGCAACA         CGCCG-GCGGG ACGG CCCGCGCGGCG          GCAACCGGAGGATGA  76 408
LK412_RS18815 NONE
LK412_RS18810 NONE
LK412_RS18805 3924599 .. 3924621 -    -9  -2.71681   CAAGTCGGTCAATGA           CACCCACGGC CAT GCCGCCGGCG           ACCGGCTGCTGCGCG  52 361
LK412_RS18780 3920898 .. 3920908 -  -2.4  -2.82519   GCATGACATCAATCA                 GGCG GCG CGCT                 GGTGCGACACGCTGG  39 190
LK412_RS18735 NONE
LK412_RS18730 NONE
LK412_RS18725 NONE
LK412_RS18720 3910359 .. 3910393 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS18700 3906161 .. 3906185 -  -7.8  -4.96388   AAGCACTAAATAAAA          GCCCGGGA AAACCCGCA CCCCGGGC          GCGACGCCGCTTCAG  86 37
LK412_RS18695 NONE
LK412_RS18690 NONE
LK412_RS18685 3903315 .. 3903331 -  -3.6  -2.62157   GATGAATGCGATAAG              CCATGG CCGTT CCAGGG              TGCGTCTACTTCTTG  40 31
LK412_RS18680 3902237 .. 3902264 - -15.6  -2.56596   CCCCGCAGGAATCCA        TGTGCCTGTCCC CGCT GGGACAGGCACC         CCGGCACCCCGGGCA  74 69
LK412_RS18675 3901256 .. 3901284 - -10.1  -4.11216   GCGGCATGCCGAAAA        GCGCGCCGCCGCG AGC CGCGCCGGCAAAC        CCCGCCGCTTGTTGC  78 94
LK412_RS18670 3899972 .. 3900006 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS18655 3897390 .. 3897419 -  -4.1  -4.29738   CGATATCCACGAAAA       CTGCGTGCGCCAC GGCC ACGGCGCCGGCAA        CTACGTCAACTATGT  67 144
        pyrE 3894013 .. 3894042 -  -2.7   -4.8622   CTGCTGAAGGAAAAA       CTGGG-CTGATCCC TCG GGAGCCAGTCCCCG       TGGGGACGAGCTCCT  77 118
LK412_RS18620 3889359 .. 3889387 -  -4.5  -3.35679   TCGTTGCATGGATAA       TCAGCC-CGGGC CTGCCT GCCCGCAGCTGC        TTCGCGGGCCGCGCC  51 79
        mreC NONE
        mreD 3887904 .. 3887929 -  -3.9  -3.09492   TCTTGAATTCGAACA         TGCGCCCGCCCG GAT CAGACGG-CGGA         AGATTCGACGTCGTC  45 14
        mrdA NONE
        rodA 3884301 .. 3884348 -  -4.6  -3.61715   GATCGCGGTCAACAA GGCGCGCGTGCTGGCGGCCAG GGGCGAG CCGGCCCCCGACG-GCGCGCT GATCGATGCGCAGGG  54 496
LK412_RS18570 3878187 .. 3878225 - -11.9  -4.42788   TCGAAGGCCAGAAAA  TCACCATGCAGGACC-TGC GCG GCAAGGTCGTGC-TGGTGA  AGTTCTGGGCCACCA  88 498
        rsmI NONE
LK412_RS18540 3874419 .. 3874453 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS18530 NONE
LK412_RS18525 NONE
LK412_RS18520 3871130 .. 3871161 - -15.9  -4.25104   GTCCCCGCAGGAAAA      CCGGTGCCTGTCC GCGCGG GGACAGGCACCCG       GGCCGGCGCTCAGCC  95 35
        trxB 3864376 .. 3864386 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS18480 3863074 .. 3863095 -  -8.7  -3.18582   CAGCTCAGCTACCAA           CCG-CTGCGC GAT ACGCAGGCGG           TGGGCCTGGTGGCGC  56 269
LK412_RS18425 NONE
LK412_RS18420 3850457 .. 3850471 -  -2.7  -2.62184   CTTCTGCTCAGACCA               TGCGG CGTGC CCGCC               AGTTCCCTGGCGTCA  39 38
LK412_RS18415 3849048 .. 3849058 -  -5.4  -3.37533   CCCCAAAACCATCAA                 GGAA CGC TTCC                 TGCACGCGTTCTTCT  49 438
LK412_RS18400 3847599 .. 3847654 -  -9.8  -3.13403   GGCGGCCGACGAAGA GGCGTACGCGCCGCTGCG-CGGCCAGGCG GCG CGCTTTGCCGACGC-GCGGCGC--A-GCC TCTGGCTGGTGCTGG  60 53
LK412_RS18385 3844385 .. 3844395 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 54
LK412_RS18380 3843219 .. 3843256 - -10.6  -3.53224   TAGCGCTGCGCGAAA  GCCGTGGCCGGGCGCAACG GCG CGT-GCGCCTGGCC--GGC  TGCTCCATGACCGGC  70 123
        gltS 3841948 .. 3841959 -  -4.4  -3.16881   GAGCCAGCGGATGAA                CATG GTCA CATG                 CCTCCCACGAACGGC  47 19
LK412_RS18370 3840001 .. 3840015 -  -2.1  -3.14931   GCCAGCCTGGACGAA              GCCATC AAGG GA-GGC               GCGGGCATCGTGATC  43 455
LK412_RS18340 3834139 .. 3834167 - -10.3  -2.57026   TAGAGTGACACCAAT       GC-GCCGGCACGG CAAGC CCG-GCCGGCCGC       TTTCCCCCATCCAGA  57 65
LK412_RS18305 3827659 .. 3827703 -    -4  -2.87132   GGGTCGGCCGATACA TCGCAGGTA-TTGCCGCCGCG CGGC CGCGGCGTCATCCGCCGGCGG CCCCCGCGCCACGCC  43 12
LK412_RS18300 NONE
LK412_RS18295 NONE
LK412_RS18290 3824321 .. 3824366 -  -8.9  -3.32769   GGCCGAAACCATCAA GGTCGGCATCGCCCTGGCCGTG CAT CCCGAC-AACGCCACGCCGACC ACCGCCAACTTCGTC  59 105
LK412_RS18280 NONE
LK412_RS18275 3821072 .. 3821094 - -10.4  -4.69622   AGACAAGGGGAAAAA           TCGCTGCGCC GGC GGCGCGGCGT           GCGGACGACGCTAGG  93 36
LK412_RS18270 3819623 .. 3819638 -  -2.6  -4.08216   GTATTGCGTGGAAAA              CATG-AG CTA CTACATG              GTGTCGCGCTTCCTG  58 233
LK412_RS18235 3813678 .. 3813693 -    -6   -3.5774   ATCGAATCGTGGAAA              CCGCTG TTCG CCGCGG               CGCTTTGAGCGGTAA  56 63
LK412_RS18205 3804702 .. 3804718 -  -6.5  -3.14564   GCATCGCGCCAGGAA              GCCAGGA AAG TACTGGC              CGTCGAAAACCAGCG  51 70
LK412_RS18185 3800892 .. 3800921 -  -7.7  -3.14132   GCCGGGGTGTACGAA       GAGCTGCTGGGCG TGTG CGGCGAGCGGCTC        GCGGCGCTCAGGCAG  53 33
LK412_RS18175 3798534 .. 3798554 -  -3.1  -2.77192   AAGGCCGGCAAGAAC            GATCTGCAG CAG CCGCTGCTC            TATGGCTCGGTGCTG  39 97
LK412_RS18150 3791533 .. 3791559 - -23.8  -4.79223   GCACAGCAGGAAAAA         GCGGGTTGCGGC GCT GCCGCAACCCGC         TTTGTGCGTCAGTGA 100 34
LK412_RS18105 NONE
LK412_RS18100 3779962 .. 3779999 -  -8.3  -3.28924   CATGGCTGTCTACAA   CGGCGTGGCCTACCTGG CCGG CCAGGTACCCGACGACG    CCTCGCTGGACATGG  59 441
LK412_RS18085 NONE
LK412_RS18080 3777306 .. 3777349 -  -3.1  -4.58685   AAATGTTGTGAAAAA GCGA-CCCCCTCATGGC-GGA TTCC CCCTGCCATAGGGGGGATTAC CAGTAGTTTTCGACC  71 22
        phaZ 3775936 .. 3775951 - -11.8   -4.2687   CGTAAAAAGCAGAAA              CGGGCC AGGC GGCCCG               TTGCAGGGAGCGCGC  91 48
        rsxB NONE
         nth 3774548 .. 3774562 -  -3.4  -3.88985   AAAACGCTTCAGAAA               CCAGGG TTT CCACGG               TGTTTCCCACGATGT  56 108
LK412_RS18060 NONE
LK412_RS18055 NONE
LK412_RS18050 3771609 .. 3771619 -  -8.2  -2.52516   TGCCGGATGAGCAAG                 GCCG TGT CGGC                 TTCCTTCAGGAGGTT  51 39
LK412_RS18045 NONE
LK412_RS18040 NONE
LK412_RS18035 NONE
LK412_RS18030 3767670 .. 3767704 - -30.1  -3.09516   GCGCCCAGGACTGAA     CGCTGGCGGCGCGGC CTGGC GCCGCGCCGCCAGCG     TGCGCGCGGGTCAGC 100 36
        msrB NONE
LK412_RS17990 NONE
LK412_RS17985 NONE
LK412_RS17980 3759231 .. 3759260 - -19.5  -4.13767   CCCGGCAGCCGAAAA       CAAAATTGCCCGC GAAA GCGGGCAATTTTG        TTGATGGCGATGGCT 100 47
        lplT 3750623 .. 3750651 -  -6.5  -3.74747   CCAAGCCCGAGGAAA        TCGCCGCCTGCAG TCC CTACCTGCGGCGC        CAGATTGCCCTGCTG  61 278
        ompR 3747788 .. 3747815 -  -4.1  -3.99324   CGCGAGCAGCAGAAA        GGTGCGTC-CGA ACAGG CCGAGACGCAAC        CGCGAGGTCAGGTTT  59 101
LK412_RS17935 3746438 .. 3746448 -  -4.6  -3.10677   AATTAAGGCAGGCAA                 GGCC TCA AGCC                 CTAAATTCTACGCTA  47 38
LK412_RS17930 3745825 .. 3745841 - -10.8  -3.95584   TCTGGAGCAATGAAA              GCCCGG ACGAG CCGGGC              CGGGGAAATTACAGC  79 34
LK412_RS17925 3745209 .. 3745261 - -15.5  -2.79188   GAGGGAAGGGAATGA GTGCCGG-C-CCCGCGCAGG-GGCCG GCTG CGGCCGCCGGCGGGGGAGGCCGGCGC ACCGCGGGGGGCGCT  75 40
LK412_RS17915 3742549 .. 3742565 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
LK412_RS17895 NONE
LK412_RS17890 3738797 .. 3738823 -  -8.7  -3.53012   CTGCGGTGCGCCAAA        GCGCGC-CGC AGGCCGGG GCGGGCGCGC         CTATTCGAGCTGGAT  62 26
LK412_RS17885 3737716 .. 3737752 -   -16   -4.2558   GATTGTCCAGGAAAA   CGCGCCAATTCCCGC TTGATTGG GCGGGA-TTGGCGCG    CAATGGGCAGGCGCC  95 41
LK412_RS17880 3736827 .. 3736837 -  -2.4  -3.01497   GCAGCCGAAAGCATA                 GCCG TTC CCGC                 TCCGGCCGCCTTACT  41 84
LK412_RS17875 3735393 .. 3735425 -  -3.2  -4.72272   GTTCTCCACGAAAAA     GGGGGCG-GAACCGG AGGG CCGGCGCGCGCCGGC      GGCGTGCGCCGGCCG  75 476
LK412_RS17865 NONE
        argF 3733088 .. 3733110 -  -6.3  -2.58714   TTTGACAGCAACGGA           CCGTCAAAC AAGAA GTCTAACGG           GGCATTTTAGCGCTT  46 112
        argG 3731664 .. 3731693 - -23.7  -4.08394   ACACCTGCGGCAAAA       GGGTGCCTGTCCC GGCA GGGACAGGCACCC        TCGCGCGGTTGCCGC 100 41
LK412_RS17790 3718604 .. 3718640 - -20.4  -3.34398   GCGGCGCGGCAAAGA   GAAAGCCCCGG-CAATC ATGC GATTGACCGGGGCTTTC    ATGAAGGCAGGCCAT 100 60
LK412_RS17780 3717668 .. 3717690 - -12.7  -5.63517   GGCGCAAAGAAAAAA          CCCCGG-CGC TTGC GCGACCGGGG           TTTTTGGGCACATCA 100 65
LK412_RS17770 NONE
LK412_RS17765 3714715 .. 3714725 -  -4.6  -2.92371   ATGGAGGCAACCATA                 CCAG ATG CCGG                 TTTACGGCTGGCTGG  44 53
LK412_RS17760 3712971 .. 3712981 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS17755 3711716 .. 3711748 -  -3.2  -3.05844   TGTTGCACGCCAAGA      CGGCGGTGGTCGAC GGCGT GTGGTCCACGGTCG      GGTCGAGCAACATGG  43 244
        egtD 3708279 .. 3708293 -    -7  -2.71011   ACGGGCGGGTAAGCA               GGCCGC GCT GCGGAC               GTGGGTGGCGGGCGC  48 366
LK412_RS17730 3707081 .. 3707112 - -20.4  -4.37886   TCATCGCGCACAAAA      CAAAATGCCCGCAA GCGA TTGCGGGCATTTTG       TTTTGAATTCTCTGG 100 38
LK412_RS17715 3705590 .. 3705630 -  -5.8  -3.58536   AAATTGACGGCCAAA  GCCGCCTCAGTCCCCGCG AATGG CGCGCCGGCCGCGGCGGT  AGACTGGCGCAGCCT  57 309
LK412_RS17705 3704821 .. 3704876 - -13.9  -4.11216   CCGTTACGGTTAAAA GTCGCCCTGCGCGGCCCTGGCGCCGA ATATG TCCACGATAGGG-CGCGCAGGGCATC AATAGGCAAGACTGG  85 77
LK412_RS17700 3703325 .. 3703335 -  -8.2  -3.14132   CCGGCCGCTGACGAA                 GCGC GCC GCGC                 TAGTGCTGGCCGGAC  56 25
LK412_RS17680 3698471 .. 3698490 -  -8.6  -3.68222   TGCGAATCTGAATAA            TGCGAAGC ACGC GCTTCACA             ATATGCATATAGGCA  65 139
LK412_RS17675 3696977 .. 3696991 -  -2.7  -2.69151   TGGCTTCAGATACTA               CGGGG CTCAT CGCCG               CACTCCTGGCAGGAA  40 82
LK412_RS17670 NONE
LK412_RS17665 NONE
LK412_RS17660 NONE
LK412_RS17655 3693093 .. 3693108 -  -7.5  -2.87132   CCCCCCTCGCAGATA              CGGCG CCTTGC CGCCG               GGGCGGCGAGACCGG  52 139
       groES NONE
        groL 3690840 .. 3690863 - -19.6  -4.86621   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTTGGGAAG 100 87
LK412_RS17635 NONE
LK412_RS17630 3686095 .. 3686108 -  -9.5  -3.53012   CGGCGCGCTTGGAAA               CGGCG GCGC CGCCG                CTCAGTCCAGGACGA  64 27
LK412_RS17625 NONE
        pyrF 3683871 .. 3683906 - -20.4  -2.59748   CACCCTGAGAAGTCA    GCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGG     GGGGTTACGTTCTTA  95 30
LK412_RS17585 NONE
LK412_RS17580 NONE
        phnD 3676228 .. 3676265 - -11.3  -3.02511   TGTACTCCTGGAACA   CCATGCCGATGCGCCG GCGCGCG CGGCGCAGCGAC-TGG   CCGCGCACGCGGGCC  62 261
LK412_RS17565 3675051 .. 3675082 -  -6.7  -3.78329   GTCGAGCAATTGAAA      GGCGCGTTCGAT GTCGGCCGG ATCGAA-GCGCC      GCATCCAGGTATTGA  64 101
        phnE NONE
        phnE 3672814 .. 3672834 -  -3.9  -3.59979   CCCGCCGAGCCGAAA            GCCTAGGAT AGT ACCCAAAGC            TAACCCGGAAATTGA  51 165
LK412_RS17545 NONE
LK412_RS17540 3670938 .. 3670956 -  -2.2  -3.53091   ACGCGCTGGCGCAAA             TCCGCGCC TTC GACGCCGC             CATCACCCTCACCGG  47 262
        rsmD NONE
        coaD NONE
LK412_RS17520 3668453 .. 3668477 - -15.7   -3.9941   TGGCCGACAACGAAA          GCGCGCCGG TGACAGG CCGGCGCGC          CGCGAGGGGGGGAGG  91 59
LK412_RS17515 3667268 .. 3667294 - -12.2  -3.57144   TGCCGGATCCTGAAA         GTGCACCCCGAC ATG GCCGAGGTGCGC         TGGCCGTCGTAGGCC  74 45
LK412_RS17500 NONE
LK412_RS17495 3663094 .. 3663110 - -13.7  -4.72272   GCGGCCCACGAAAAA              GCCCTCC AGC GGAGGGC              TTTTTTTCTGAGGCG 100 49
LK412_RS17485 3660699 .. 3660741 -  -3.3  -3.66874   TCAACCGCATCGAAA CCGACTATGCGCG-GCGC TATCAGGC GCGCGCGCGCGTGCTCAG GCTGACCGACGGCGA  51 504
LK412_RS17450 3650469 .. 3650483 -    -7  -3.41636   AAGCAAGGCAAGGAA               CGCGAC GAG GGCGCG               CCCGGAACGTCGGCG  56 172
LK412_RS17445 NONE
LK412_RS17440 3648351 .. 3648394 - -10.9  -2.57344   CAGTCTTGCGACAAT CGGCACGGCAGTGGGGGCGGC CGGG GCCGCCCGC-CGGGC-TGCCG TCAGTTGAGGTTGAT  59 26
LK412_RS17435 3646636 .. 3646655 -    -7  -2.86177   AGAGCGGATAGTATA            TCCCGCGC CCAT GCGCGGAT             GCCTCATGCGGCAAG  50 29
LK412_RS17430 3645782 .. 3645792 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 110
LK412_RS17425 3644586 .. 3644599 -  -3.7  -2.71791   AGGTCTTGTTGAAAC               GCCGG CCGG CCCGC                TGCAGGAAGGGCCTG  41 204
LK412_RS17415 3644285 .. 3644313 -  -3.8  -5.55769   GGCTACAAGAAAAAA       GGAAGCACGGCAG GTAA CCGCTA-GCTTCC        CTTTTTGGTGTTTGG  95 38
LK412_RS17410 3644162 .. 3644181 -  -6.3  -3.94877   ATCCTGGAACAAGAA            GGCTCGC GACGCG GCGGGCC             TTGAAGTGTTTGGAG  64 35
LK412_RS17405 3643677 .. 3643696 -  -7.1  -3.14468   CGCCATTATAGGCAA            GCGCGCGC GCCGG GC-CGCGC            TACGGCCGGATCACG  52 25
LK412_RS17400 NONE
LK412_RS17390 NONE
LK412_RS17385 3640975 .. 3640987 -  -4.7  -3.54424   TTCGACCGGGGGAAA                CGGCG TGT CGGCG                GCCAGCCAGGGCAGT  52 50
LK412_RS17375 3639440 .. 3639477 -  -3.2  -3.00923   GTGGAAGAGGATAGA   CATGGGGCGGAATTGT AGATCG ACTTTGCCGCCCCGCG    CGTGCTCAGGGCGGC  42 31
LK412_RS17370 3638357 .. 3638369 -  -6.2  -4.74103   TGCCCAAGGCAAAAA                GCCC TCTTG GGGC                CCATGCCCGCTCGGG  82 49
LK412_RS17360 3636226 .. 3636261 -  -8.8  -3.54424   TCGCATTCCGCGAAA    CGG-CGGGCGCGCAGGC CTC GCCCGATCGGCCGGCCG    GGCCGCGCGATGCGC  62 67
LK412_RS17330 3627371 .. 3627388 - -10.5  -3.21218   ACGCCCGAGCAGGAA             GGGCGCA GCAA CGCGCCC              AAGCGCCAACTGGCA  60 82
LK412_RS17310 NONE
LK412_RS17305 NONE
LK412_RS17300 3622889 .. 3622901 -  -2.6  -3.07816   TCTGGAGGCAGCCAA                CGAG ATCCA CCCG                CCCTTAGTGGAGACG  41 29
LK412_RS17295 3621482 .. 3621500 -  -6.7  -3.77832   GCGCAAAGCGAAGAA            CGCACCGG CCAC CCGGTG-G             ATGCGCGCCGCAACA  61 313
        galU 3618967 .. 3618985 -  -4.4  -2.71924   CATGGCGCCGCAAAT             GGTGGCCG GCG CGGTCATC             GCCTTTACCGAGCGC  40 299
LK412_RS17265 3614776 .. 3614802 -  -9.5  -2.62184   CCCGGCGGTACAGCA        GCTGCGCTTCGGC GCC GCCG-AGC-CAGC        CGGCGCGCGCGCCTG  55 143
LK412_RS17250 3610891 .. 3610905 -  -2.8  -4.09685   CGCCAGCCCCTAAAA               TGCC CCTGTCC GGCA               CGCGCCGCTTTTCCG  59 521
LK412_RS17240 NONE
        dusB NONE
LK412_RS17230 NONE
        purH NONE
        ruvC NONE
        ruvA 3605324 .. 3605372 - -10.8  -3.30124   GCTCACGCGCGACAA CGTGGCCAGCGGCGCCGCGCCCTC GGG GTTGGC-C-GCGCCGCCCGCCGCG CTGGAGGCGGTCGCG  66 83
        ruvB 3601981 .. 3602015 - -14.9  -4.84359   CGAGGCCGAGAAAAA    GCCGCGCAGCTCGCGC GCGG GCGCCCGC-GCGCGGC     CCGACCCCATCGACC 100 272
LK412_RS17185 NONE
LK412_RS17180 3597856 .. 3597891 -  -9.1  -3.03124   GGCCATGCGTGAACA   TGC--CCAGGCGCGC GCGCAATG GCGCGCCTGGATGCA    GGACTACGATGCGTT  55 336
LK412_RS17165 NONE
LK412_RS17160 NONE
LK412_RS17155 NONE
LK412_RS17150 3592790 .. 3592833 -   -21  -3.53091   AGCCTGGCGGGCAAA GTCAGCGGGTGCCTGTCCCC CTGC GGGGACAGGCACCCGGGGAT CAGTCTATCTTGTAG 100 25
LK412_RS17145 NONE
LK412_RS17140 3590225 .. 3590238 -  -2.4  -4.10144   TGAAGACAACAAGAA               CGAT CCGCGC ATCG                CGCGCTTTATCAAGG  58 151
LK412_RS17130 3588244 .. 3588254 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS17125 3586727 .. 3586753 -  -5.9  -4.14243   CACTCCAGCGCAAAA        CCAACA-GTGCC CTGG GGCACGTGTTGC         AGAGACCCCACTCTA  66 512
LK412_RS17110 NONE
LK412_RS17105 3584408 .. 3584418 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 218
LK412_RS17100 3582948 .. 3582961 -  -5.9  -6.06723   GGGGCGAAAAAAAAA               CCGCC CGAA AGCGG                TTGATCAATCCTGTG 100 468
LK412_RS17095 NONE
LK412_RS17090 NONE
LK412_RS17085 NONE
LK412_RS17080 NONE
LK412_RS17075 3578186 .. 3578210 - -15.7  -4.67038   GCCCCAAAAGCAAAA          GCCCCACTGGC TCG GCCAGCAGGGC          TTAGAAAGAAGAAGG 100 77
LK412_RS17070 NONE
LK412_RS17065 3576583 .. 3576599 -  -5.1  -3.65522   CATCGACGTCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  57 514
LK412_RS17050 NONE
LK412_RS17045 3574148 .. 3574165 - -10.5  -3.65351   GCAGGCTGACGGAAA             CCCCCGC GTGA GCAGGGG              CAACCGTCAATCGGC  70 43
LK412_RS17040 NONE
LK412_RS17035 NONE
LK412_RS17030 NONE
LK412_RS17025 NONE
LK412_RS17020 NONE
LK412_RS17015 3571662 .. 3571675 -  -9.5  -5.46657   GAGGGCAATAAAAAA               CCGCC ATGT GGCGG                GTTCCAGTTGCGCCC 100 69
LK412_RS17010 NONE
LK412_RS17005 NONE
LK412_RS17000 NONE
LK412_RS16995 NONE
LK412_RS16990 3567264 .. 3567284 -  -3.1  -5.32944   CGGATAATGAAAAAA            TGCCGCGAC GAG ATCCCGGCG            TTCGGGATTACTCAT  89 33
LK412_RS16985 NONE
LK412_RS16980 NONE
LK412_RS16975 3562321 .. 3562334 -  -3.7  -3.49864   CGTACATAACAAAAT               TCCCC ATGC GGGGC                TTAACAAATCCACTC  51 47
LK412_RS16970 NONE
LK412_RS16965 3561740 .. 3561752 -  -6.2  -5.80817   CTCAACACAAAAAAA                GCCC CCTAT GGGC                CCGTTCATTCATTGG 100 30
LK412_RS16960 3561287 .. 3561301 -  -2.7  -3.53012   GGCCCTCCGGCCAAA               GGGCC AGACA GGCTC               TCATCCCCCCTGCCA  49 177
LK412_RS16955 NONE
LK412_RS16950 NONE
LK412_RS16945 NONE
LK412_RS16940 3558949 .. 3558969 -  -9.7  -3.54741   GAGCAGCTGGTGAAA            GCCAGCC GCTTTCA GGCTGGC            GACCGCGTGCTGTTC  67 405
LK412_RS16905 3554418 .. 3554436 -    -3  -2.65264   TCACGATCGATAGGA             GCCCTG TGGCTGC CGGGGC             GGGCTGGCGCCCGCC  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB 3550484 .. 3550503 -  -2.8  -2.54325   CCTTTGCAAAGAGAG            TCACACGT GTTA ACGGGTAA             AAGGGCCCCACGTTG  39 15
         pal 3549904 .. 3549933 - -21.5  -4.54727   GGTCTGAAACGAAAA       CGTCGGGACGGCC GGAT GACCGTCCCGACG        CGTGGTGGGGCTGCT 100 56
        ybgF NONE
LK412_RS16865 NONE
LK412_RS16860 3547226 .. 3547253 - -10.5  -4.15453   GAAGTCAGCGGAAAA        CGCGCCGCGGCC GGGCT GGCGGCGG-GCG        AGGTGCTCATCCTAT  78 120
LK412_RS16855 NONE
LK412_RS16850 3545845 .. 3545856 -  -2.2  -3.21099   GGGCGTGACCAGGAA                GC-CG TGG CGCGC                GTAGTGCAGGGCCGG  42 465
LK412_RS16840 3543687 .. 3543741 -  -2.5  -2.70932   CCTGTTCTGGAAGCA TCTGGGCCACG-CCGGCGCCAACACC TTGC GGGCCTGGGGCCGGGCCTGGACCGGC GGGCTGCTGGCGCGC  39 500
LK412_RS16830 3540563 .. 3540577 -  -4.2  -3.64703   TCGCGCTGACCGAAA               GCGG GCACACG CCGC               TGATCATGTCGCGCA  51 297
LK412_RS16820 3538067 .. 3538079 -  -9.1  -2.52464   GCGTGGCGCAATTCA                TCGGC CTG GCCGA                CGCCTTGCTGGCGGC  51 100
LK412_RS16800 NONE
LK412_RS16795 3531382 .. 3531398 -  -2.2  -3.53012   TGTCTTCGGGCCAAA              GTGGTA GAGGA TACCGC              GTTGCAGCCTCCTTG  48 94
LK412_RS16790 3530240 .. 3530259 - -16.4  -3.15147   GTCAAGCAATAGACA            GGGCGGCG CGTC CGCCGCCC             ATGCCGGCTGGCGGA  81 388
LK412_RS16765 3526751 .. 3526765 -  -3.4  -4.07687   ACCGGGCGGCGAAAA               CGCCGG TTT CCGAGG               CCGACGCCAAGCGCG  60 247
LK412_RS16730 3517509 .. 3517523 -  -2.1  -3.84406   CGCCTACCAGAAGAA               GATCG GCCCG CAATC               GTCGCTGCGCGAGCG  56 430
        nspC 3514579 .. 3514598 -  -4.2  -3.18366   GCTTCAATCAACAGA            GCCAGTTCC TCA GGA-CAGGC            TGTCTACGTAATCCT  45 15
LK412_RS16710 3513185 .. 3513195 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 119
LK412_RS16705 3512050 .. 3512076 - -10.1  -3.06133   GAATGTTCGATTGAA         GCGGTAGCCGT ACGAA ACGGCCACAGC         GTTGCGCTGCCGGCA  60 130
LK412_RS16700 3511326 .. 3511369 -  -2.8  -3.91897   CGGGTCACGTACAAA TGGTAGGGAACGCGGCCGGC GTCA GCGCGCCGCTTCCGCGACCG CCTCGATGGTGATGC  58 3
LK412_RS16685 3506655 .. 3506671 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGTCACCGGG  58 494
LK412_RS16665 3501962 .. 3501990 -  -7.9  -3.07113   TACTACCTGATGGAA        CCGGGCAGTGGCG AAG CGCCGCCGCGCGC        GCTGCCGCCGTGGCC  52 295
LK412_RS16655 3500334 .. 3500368 -  -8.5  -3.06183   TGCATCGGCACGGAA     TTGCGCGCGGTCC TGCCGGTAT GGTCGGCGCGCAA     GCAATGGCTGGCCGA  55 501
LK412_RS16630 3495914 .. 3495934 -  -8.2  -3.12999   GTATCCGACAGGTAA            GGGAGCCG GCCGG CGGCTCGC            ACACTCATACCCGGC  56 101
        ispB NONE
LK412_RS16620 3494699 .. 3494724 - -13.3  -5.15969   CGCGAACGCAAAAAA         GCCGACACCAC GTTT GCGGTATCGGC          TTTCGCTATGCGCCC 100 108
LK412_RS16610 NONE
LK412_RS16605 NONE
LK412_RS16600 3488068 .. 3488102 - -13.5  -2.99947   GAATCTTCACAGATA    GCC-GGCCTCGCCGGC CGGC GCCGCCGATGCCAGGC     GTGCGGCGCCCAATG  70 152
LK412_RS16590 NONE
LK412_RS16585 3484525 .. 3484540 -  -7.5  -3.14211   ACTGCGCGCGAGCAA              CGGCG GATACG CGCCG               CGAGGCCGGGGCACC  54 62
        cyaA 3478362 .. 3478390 -   -11  -3.31779   AAGAACGCAAAGAGA       CGGCGCCGCCGCGC GAG GCA-GGCGG-GCCG       TGATTCACGGCGCTT  66 40
        cyaB NONE
        cyaD NONE
        cyaE 3473418 .. 3473442 -  -2.7  -3.59979   GCCGGTTATGCGAAA          TCTGCATAACG CGG CGATTTGCAGG          GTTACTCCTTAGGCG  49 27
LK412_RS16550 NONE
LK412_RS16545 3471346 .. 3471362 -  -6.5  -3.54424   CGCCATCCGGGGAAA              GGGCG AACAGCA CGCCC              CAGTTCCATTGATAT  56 129
LK412_RS16535 NONE
LK412_RS16530 3469153 .. 3469169 -  -7.9    -3.273   GTAGAAAAGGGAAGA              CATGCGG CTA CCGCCTG              AGTATTGGATAACGG  56 41
LK412_RS16525 3467810 .. 3467823 -  -2.3  -3.44848   GGGCTTCACCAAACA               GGACG TCCA CGTCT                TCTACGTCAACAGCG  47 497
LK412_RS16500 3463173 .. 3463192 -   -15  -3.14564   CCATGGCGGGAGCAA            CAGGCGGC CGGC GCCGCCTG             GGGCTTGCTCGCCGG  76 151
LK412_RS16495 3461804 .. 3461822 - -10.2  -3.04461   GACCCAGGCCGAACA             CGCCGCGA TCC TCGCCGCG             CTGCGCGCCGGCGAC  59 182
        pepN 3446101 .. 3446113 -  -3.3  -2.74192   TACGTTTCAAGAGTA                GCTCC TAA GCAGC                CAGATCCAAGGCTTT  40 17
LK412_RS16425 3444876 .. 3444910 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
         mfd NONE
        serB 3438353 .. 3438375 -  -6.1  -3.16039   AAGCAGCCGGAGTAA           GGCGCGCGG GCCGG CCGGGCGGC           GGGAGGCCGTCGCGA  51 131
LK412_RS16390 NONE
LK412_RS16385 NONE
LK412_RS16380 3433194 .. 3433210 -    -3  -4.11484   GGCAAGTGCTGAAAA             CAG-ACC GGCT GGTGCTG              GAGCCGCAATCGATG  61 509
LK412_RS16280 3410414 .. 3410433 -  -4.2  -3.21099   GGCTTCCAGGATCAA            TTGCCGTCG CAG CG-CGGCTA            GCTGTGAACTGTCAA  45 23
LK412_RS16275 NONE
LK412_RS16270 NONE
LK412_RS16265 3408979 .. 3408995 -  -2.1  -3.05384   GTGGCCGTCACCGAA              TGGGCGC TGC GCGTCAA              CGCGCGAGCATGAGC  41 22
LK412_RS16230 3401689 .. 3401722 -  -6.9  -3.09516   CTTTTCATGACGCAA     CCTAATTATCAAAGA ATAT TCTTGGATAATTAGT      CAAAGCGAGATTACC  52 108
LK412_RS16225 NONE
LK412_RS16220 NONE
LK412_RS16215 NONE
LK412_RS16210 3395049 .. 3395059 -  -3.2  -3.28712   CGCGGGCCTGGACAA                 CCAG TAC CTGA                 AGGCCGGCGATACGC  47 239
LK412_RS16195 NONE
LK412_RS16190 NONE
LK412_RS16185 NONE
LK412_RS16180 3387067 .. 3387118 - -12.9  -2.53876   GCCTACCTGAAGGGA GGCACCGCGGCGC-TGGGCGCGGA CCGGC TGCGCGGCGACGCGCCGCAGTTCC TGACCGAGGCGATCG  62 232
LK412_RS16155 NONE
LK412_RS16150 3379571 .. 3379589 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 303
LK412_RS16110 3370560 .. 3370597 -   -12  -3.05816   GGAGCGCTCATGGAA   GCAGCGCCTCGAACAGC TGCAC GC-GTTCGCGTCGCTGC   GGCAGGCTACCCAGT  66 470
LK412_RS16080 3365075 .. 3365085 -  -4.6  -4.07568   CGGGCCTGGGGAAAA                 CAGC GGT GCCG                 TTTGATGGTGCACCC  62 31
LK412_RS16075 3363972 .. 3364011 -  -2.8  -3.90291   AGCTGGTCAACGAAA  GCGATATCGAGCATG-CCA TCG TGGTCCTGCTGGAAATCGA  GAAGACCGTGGTCGA  56 434
LK412_RS16065 3361878 .. 3361888 -  -4.6  -3.36327   CCAGCGCATCTACAA                 CGCG GCG CGCA                 ATGTCGAGGCGGCCG  49 255
LK412_RS16045 3357432 .. 3357446 -  -2.1  -2.50816   TGGTCATCTACGAAT              GGATCC TGCA GGA-CC               TCGGCCGCTGGGGCT  37 520
LK412_RS16015 3351072 .. 3351083 -  -7.2  -2.52623   GCTGGCCGAGAACAT                CGCC TACG GGCG                 GCCCGGGGCCACGCA  48 497
LK412_RS16005 3348651 .. 3348667 - -11.5  -2.77013   GATGTCGGTAACAAG              GCGCAGC ATC GCCGCGC              TCAGCCCAGGCGTTC  62 26
LK412_RS16000 NONE
LK412_RS15995 3348141 .. 3348160 -  -4.2  -4.00042   GTGCGCAGCAAATAA            GGCCGCGCG GTT CA-ACGGCC            GGTATCGGGGTAGTC  59 17
LK412_RS15985 3346108 .. 3346122 -  -7.1  -2.70932   GCCGGCGCTGAACTA               CCGCT TCGAC AGCGG               CAGCACGCTGACCTT  49 365
LK412_RS15970 3343199 .. 3343227 - -16.9  -5.53288   CCGAAGCGAAAAAAA        TCCCATGCAAATC AGT GATCTGCATGGGA        TTTCCGGTCTGGCCG 100 59
LK412_RS15965 NONE
LK412_RS15960 3340023 .. 3340081 - -29.8  -3.25072   GGGAGGAGAACGGAA TG-GGCGCGGCCATCCGGCCGCCCGCGGC TTGC GCCGCGG-CGGCCGGATGGCCG-GCTTCA GGACAGGGGATGAAA 100 49
LK412_RS15955 NONE
        accB NONE
LK412_RS15945 3336518 .. 3336538 -  -3.9  -2.93853   CCGTGGCAACGAAAC            CGGGACC GGTTCAG GGTCGCG            TGAACGAAATGTGTT  43 15
LK412_RS15940 NONE
LK412_RS15935 NONE
LK412_RS15930 NONE
LK412_RS15925 NONE
        accC NONE
LK412_RS15915 3330853 .. 3330863 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
LK412_RS15910 NONE
LK412_RS15905 3329445 .. 3329463 -  -6.7  -4.11216   CCGTTACTTGCAAAA            CGCG-TGC GGCT GCAACGCG             CGACGTCGGCGGGTG  67 137
LK412_RS15900 3329108 .. 3329123 -  -3.2  -3.10775   ACGCGCATGCAAAAG              GCGC TCCAGGTG GCGC               AACCGCGACGATAAC  44 105
LK412_RS15895 3327885 .. 3327897 -  -6.3  -2.88544   GTCCACTCCTACACA                TTTGG TAG CCAAA                TTGTAAAGGATTTCG  48 93
LK412_RS15890 3327620 .. 3327641 - -17.3  -3.84451   CGGGCGAAATGCAAA           CGGGCAGCC TGCC GGCTGCCCG            TCGCGCGCCCCTCAA  95 37
LK412_RS15885 3327150 .. 3327160 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
LK412_RS15880 3326052 .. 3326088 - -15.7  -3.14132   CGGCCCGTGCAGGAA    CGGCCGCCTGACGGCCT TGC AGGTCGACGAGCGGCCG    GATGCCGGTGGCATG  77 82
LK412_RS15865 NONE
LK412_RS15860 3321902 .. 3321914 -  -9.1  -3.17075   CGGCGGCTAAGCGAA                TCCGG CCA CCGGA                TGCGGCGCATAGGCC  59 4
LK412_RS15845 3319345 .. 3319378 -  -5.8  -3.62046   CGACTTCCTGAACAA     CATGCGCCCCAGCG ACGGCG CGCCCGCGCGCGTG      CAGCAGCCCGGGCAG  57 255
        dinB 3312691 .. 3312701 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS15820 3311369 .. 3311420 -  -9.2  -3.21099   GCCGCTGATCAGGAA CGGCGACCTGCGCGCGCTGGCCG TCACGAG CCGCAAGCGCTCGCCGG-CGCTG CCCGACGTTCCGGCC  56 292
LK412_RS15810 3309436 .. 3309467 - -11.6  -2.81133   GACGCACCCAGCAGA      GAGCCCCGAC-TGGA CAA TCCGTATCGGGGCTC      TCGTTTGCGTGGGTA  63 238
LK412_RS15800 3307640 .. 3307665 - -18.3  -4.55798   GAGGGGAAATGAAAA         GCCCCGCGCAA CACC TCGCGCGGGGC          AAAATAGTTTGTTAA 100 291
        gyrA NONE
        serC NONE
        pheA 3298107 .. 3298158 -  -4.5  -4.84761   ATACCTGCAGAAAAA CAATATGGCAG-CGCCG-GACGGA CACACGC TCCGTCACGGCGGCCGCC-TGGTG TGCGTCAACCACGCC  82 47
LK412_RS15750 NONE
        aroA 3295850 .. 3295863 -  -3.1   -3.6692   GCGGATGCGAAAATA               GCCATG GGG CA-GGC               GCCGTTCAGTCCCGC  53 31
         cmk 3295171 .. 3295181 -  -6.8  -3.91984   ATACTGCCGAAACAA                 CACG CGC CGTG                 GCTAGGCGCACCAGA  66 27
        rpsA NONE
LK412_RS15730 3292848 .. 3292877 - -16.6  -5.00616   GCCGGCCCGAAAAAA       CAAAGCCCCTTG AACAAG CAAGGGGCTTTG        CCGGTAGAACACCAA 100 67
LK412_RS15725 3292365 .. 3292379 -  -3.4  -3.56092   CCACCAGGGTTCAAA               GTCCAC AGC GCGGGC               TCTCGGTAGGAAGTA  49 59
        lapB NONE
       rfaE1 NONE
        rfaD 3289195 .. 3289219 -  -4.2  -3.40597   CGGTGCACGCAAACA         TCCACCCGGGC AATT ACCCGGG-GCA          AATCCGCTACTTCAG  49 32
LK412_RS15705 3288562 .. 3288572 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS15700 3287492 .. 3287514 - -14.1  -3.78934   TGCCGCCGATAATAA           CCGCCCCGG ATCGG CCGAGGCGG           TTTAGCCGCGCTGGC  83 69
        cysM 3286181 .. 3286230 -   -17  -3.01712   CTTCCTGGTCGAACA TGGCTGGCAGCGCGGCCTGC-CG GTGTT CGCGCCGGTCGCGCTGCCGGCCG ATCCGGCGCCGCTGG  82 361
LK412_RS15685 3284383 .. 3284398 -  -7.5  -3.08006   AAATAACAATAATTA              CCCGG CGAAAC CCGGG               ACCGCATTGCACAAT  54 53
LK412_RS15680 NONE
LK412_RS15675 3282630 .. 3282649 - -16.4  -5.75945   ATGGCCGAAAAAAAA            CCGCGGGC GACA GCCCGCGG             CTTTCTCTCTGCGTG 100 52
LK412_RS15670 NONE
LK412_RS15665 3279846 .. 3279861 - -11.8  -5.86332   CCAAGGCAAAAAAAA              CGCCCC TTGC GGGGCG               TTCTCGCCGAAGCGG 100 46
LK412_RS15660 3278572 .. 3278588 - -11.5   -3.5944   ATCGAGATGCCGAAA              CCCGGCA ATA CGCCGGG              GCGCTGGCGCCGCGC  72 95
LK412_RS15645 3275485 .. 3275518 -  -5.1  -2.71712   GTCGGGCCGGTAAAC     CGTGATGG-CGCGCCC GTA GCGCGTGGCCACCGCG     TCCAGCACGCCGAGG  45 264
        cysD 3273735 .. 3273746 -  -3.6  -3.90048   GGGTGTCGAAAAATA                GCGG TAGG CCAC                 ATCGATGGTGATGCC  59 330
LK412_RS15625 3271214 .. 3271234 -  -4.5   -3.6215   CGAATGCATGTCAAA            CCACTGCCG CGA CGGGCGCGG            CCCCCTACCACTGGC  52 80
LK412_RS15620 3270679 .. 3270694 -  -4.6  -4.62069   CTGCTACGGGAAAAA              GTAGGC ATAG GCCGAC               TGGCTGGCTGCCTGG  75 86
        rplS 3269082 .. 3269133 - -22.6  -2.87132   GCTTTCTTCCAGATA TCTTTTCGCAATAAAAGGACACCC TTGC GGGTGCCCTTTTATTGCGGAAAGC CGTGCCAGACACAAA 100 81
LK412_RS15605 3268201 .. 3268218 - -14.1  -5.14563   GCCGGGATGAAAAAA             GGCGCGC CACG GCGCGCC              GTACTGATCGGGAAT 100 60
LK412_RS15600 3266865 .. 3266883 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 244
LK412_RS15580 3263000 .. 3263032 -  -3.4  -3.80733   GGCAGGCCAGAATAA      CCCGGCGTTT TTAAATTTGCGTT AATCGCCGGG      CCGGCGGCGGCCGCT  56 69
LK412_RS15560 3256689 .. 3256719 - -25.6  -3.55444   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 46
        aceE NONE
        aceF NONE
        lpdA 3243539 .. 3243562 - -18.2  -2.52464   CGCCGCGCCAACGCA          CAAGGGCCCC GCGA GGGGCCCTTG           TGCTGCCATGCCGCG  85 45
         tkt NONE
         gap 3237026 .. 3237068 - -21.4  -4.07568   GCCTGCCTGCGAAAA GGGCCAGATCCGTTTCCCCG TGA CGGGAAAACCAACCTGGCCC TTGCGCCCTGTTCAG 100 51
LK412_RS15485 3235566 .. 3235581 -    -6  -3.01712   CCGGGCCGCTCAAGA              CCCGCG CCGC CTCGGG               CATCACCGGCTTCGA  48 227
LK412_RS15435 NONE
LK412_RS15430 3225595 .. 3225624 - -12.7  -3.53444   TCAGGCCGGCGGAAA       CGGGCGCGCCCGG CGTG CCGGGCGCGTCAA        TAGGCTTGCTGCGCA  74 87
LK412_RS15420 3224231 .. 3224265 -  -6.3  -3.64487   CGACACGGCCAAGAA    GGTCGCGCGGCTGGAA GGCC TGCCGG-CGCGCGAGC     GCGCCGACTTGCAGC  57 456
         mog 3222340 .. 3222365 -  -3.9   -4.7416   TGAAAATCTGAAAAA         CGGCGCGC-CCA CTA TAGCGCACGCCC         TATTGCCGGGCGGCG  77 25
LK412_RS15405 NONE
LK412_RS15400 3220870 .. 3220880 -  -8.2  -3.02511   CCGACCGGCTGAACA                 GCGC CCG GCGC                 GCGTTCGGCCTCGGC  55 264
LK412_RS15385 3218855 .. 3218879 -  -7.8  -3.93369   TGAACCTCAAGGAAA          TCGGCGCCGT GCTCA ACGTCACCGA          GGCGCGCGTGTGCCA  67 436
        flhD NONE
        flhC 3216821 .. 3216861 -  -4.6   -2.7386   AACCGACGCCAATGA TCCCCCCTGACCCGTCG GGCAAAAA CG-CGGGTTATGGGGGG  TTTTCTGGTGCTTTT  43 64
        motA NONE
        motB NONE
LK412_RS15355 NONE
        cheA NONE
        cheW 3211915 .. 3211937 - -12.7  -3.90856   AAGCGTTGAACGAAA          CGACGGGCGG CGCA CCGCCCG-CG           GACTGACCGCCGTCA  82 38
LK412_RS15340 3209819 .. 3209854 -  -7.5  -2.82516   CGGCGCAGCACCACA    CCGATACCGGCCCGCC GCGCT GGCGCGC-GAAATCGG    CCAGGATGGGAAAGT  52 341
LK412_RS15330 3208221 .. 3208260 -  -2.1  -4.43909   ACTCCAAGAAAATAA TGTCCGGACGC-CCGCTCC GTTG GGACCGGGGCGTC-AAACG  CGATGCCCGCGGTCG  67 19
        cheY NONE
        cheZ 3206972 .. 3206990 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 206
LK412_RS15295 3203988 .. 3204011 -  -6.6  -3.68351   TGCGCACCATGGAAA          CGGCGCGCCCC ATG GTGGC-CGCCA          CCAACACCGGCATCA  61 231
LK412_RS15265 NONE
LK412_RS15260 3197606 .. 3197624 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 161
        dacB NONE
         upp 3188355 .. 3188369 - -11.4  -6.34424   GCGGCAAAAAAAAAA               CCGCCT GCA AGGCGG               TTTTCCTGTGGGCGG 100 59
LK412_RS15215 3186975 .. 3186999 -  -3.4  -3.34398   GTCGTGCGCGAAACA         CGCG-CCGGTC CTGT GCCCGGTCCCG          CCCCGCAGGCCAGGG  46 77
         prn 3183955 .. 3183969 -  -2.7   -4.2679   CAAGCTCCAGGAAAA               CCTCC TCCGC GGGGG               ATAGACCCTCCTCGC  63 42
LK412_RS15200 3181478 .. 3181521 -  -8.6  -2.66316   GCGTTCATCATACCA GCCGCGCCCCGCGCCACGCA CCCC CGCGTGCTACGGGGTGCTAC TTCAATTGCGTAATC  52 22
LK412_RS15195 3181071 .. 3181123 -  -7.4  -3.66999   ACCGATCTACGCAAA CCCATTGTGCATGCCGGGGCGGAC GCGCG GCCCGCCCCGCCGTGATCAGCGGC GGCTGATCAGCAGGC  63 18
LK412_RS15190 NONE
LK412_RS15185 3180159 .. 3180180 -    -5   -3.7282   GGACGCCACCAACAA           GTGGCCGG GCGAAA CCAGCCGC            GAATGGGGCACGCCC  58 146
LK412_RS15175 3177383 .. 3177403 -  -3.1   -4.4017   CCAAGGTCGAGAAAA            TGGCCGCCA GCC TGGCGATCT            GCGCGCCCACGCTGG  68 422
LK412_RS15165 3175616 .. 3175632 -  -4.4  -3.27704   AGCTGCGAAAGTGAA             CGATGCG GCAG CGCA-CG              CCGGAAAGATGCTAC  49 89
LK412_RS15160 3173019 .. 3173033 -  -3.4  -2.62184   CGGCCCGGTACACCA               TGCCGG TCT CCAGCG               AGGCCCACAGCCGCC  39 283
LK412_RS15150 3171390 .. 3171424 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 221
         ppx 3161285 .. 3161319 - -21.4  -2.52464   GCTCCCCGGAAGTCA     GCGGGAGCCAGTCCCC TTC GGGGACAGGCTCCCGG     AGATCGGGTTTCAGG 100 36
LK412_RS15080 3155657 .. 3155669 -  -9.1  -2.83271   GCAGTCGTACAAGCA                GCGCT TCA AGCGC                GTGGTCGAACGCAAG  53 145
LK412_RS15070 3154457 .. 3154482 - -10.3  -3.53012   GCGGCCCGCCTGAAA         CCGGCGGGCCC GTCC AGGCCGGCCAG          ATCAAGTACTATCGC  67 34
LK412_RS15065 3152981 .. 3152995 -  -5.6  -3.02144   CCAGGCCGCGCAACA               TGGGCC CCA GGCTCA               TGCCCTGCGCGTCGG  47 419
        dusA 3149403 .. 3149437 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS15020 NONE
LK412_RS15015 3144899 .. 3144909 -  -3.2   -3.7614   AATCAGGACGAACAA                 CTGA CTT CCAG                 CCCAGCTGCCCAGTC  56 2
LK412_RS15010 3143837 .. 3143868 -  -9.4  -3.03243   ACGGATCTTCGAAGA      GCATTAC-CGGCGGG CCG CCCACCGCGAAACGC      CCGGCAGCGGACTGG  55 174
LK412_RS15000 NONE
LK412_RS14995 3139020 .. 3139042 -  -5.5  -3.72324   CACCTCCAGGAAGAA          CAGGGCGTCC ATCA GGCCGCC-TG           CGCCGCCAGCCGGCG  57 14
LK412_RS14990 3137920 .. 3137939 -  -6.4  -3.73775   CCCAGGCCCATGAAA            GCC-GCCTG CCC CAGGCTGAC            CAGCCCGGTATAGCC  59 239
LK412_RS14980 NONE
LK412_RS14975 3135318 .. 3135332 -  -3.5  -2.78384   GCGCGCGTCATGACA              GCCAGC GCTT GC-GGC               GCTTGTAGTGCTTGA  41 3
LK412_RS14970 3133402 .. 3133423 -  -2.9  -3.12351   GCGCTGGATACGCAA           CGCCGGACCG CGC CGGTACG-CA           CCGCCACCTGCCTGC  44 50
LK412_RS14965 3132235 .. 3132272 -  -7.6  -2.73364   GGTCGAGGCCAAGGA   CGCCGGCGACGAAGAA GCCATG TACTTCGACGCCGACT    ACATCCGCGCGCTCG  49 490
LK412_RS14930 NONE
        lolD NONE
LK412_RS14920 3123364 .. 3123395 -  -4.2  -3.78775   GCGGGCAGGAGGAAA      CAGGGGCCCGG-CGC CGG ACGGCCGGGCGTCAG      GGCGTCGCCGCCCTG  57 22
       sphB3 3119772 .. 3119796 - -12.8  -6.34424   GCGGCAAAAAAAAAA          CCGCCAGTCG ATACA CGACAGGCGG          CCAACAACGGGCGGA 100 109
LK412_RS14910 3115179 .. 3115207 -  -9.4  -2.87132   CCTGCTCGCCAGACA        GTGGGAGGCGCC CCATC GGCGCCCCCCGT        CTTACGGCGCTTAGT  56 36
LK412_RS19925 NONE
LK412_RS14895 3110512 .. 3110526 -  -2.7  -3.02263   AGAGGTCCTGCAAGA               CCTCG GGTAG CGCGG               CTTCGCCGCGCTCCG  42 53
LK412_RS14890 3109598 .. 3109621 -    -8  -3.09015   TGCATAGGGATTCAA          GGGCAGCCGG GGCG CCAACGGCCC           GGCGCGAAAGGCGCG  54 43
        greB 3108767 .. 3108801 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 241
LK412_RS14860 3101362 .. 3101380 -  -5.2  -4.42081   AACATAAAGGGAAAA             CCCGCAAT TTT ACTGCGGC             CCGCTTCCCTGCCTG  72 16
LK412_RS14850 NONE
        odhB 3094741 .. 3094797 - -12.9  -3.74693   CCGGATTCGACGAAA CCGGCAGGGCCGCC--GGGC-GGGCCGC GATG GCGGCCCGGCCCTTGGCGGCAGCGACAG AAGAAGGCATTCTTC  79 58
        lpdA 3093102 .. 3093125 - -14.6  -4.75954   AAAATCCAAAACAAA          GGGGCGGATT GCAC AACCCGCCCC           AGGCCAAGCCGGGAA 100 73
        zapE 3091879 .. 3091895 -  -3.5  -3.14132   GGCCTGCCGGAGGAA              GTCGCCG CCA CGGTGGC              CTTCCTGGCTTCCGA  45 114
LK412_RS14825 3090023 .. 3090057 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS14785 3083433 .. 3083461 - -19.6  -2.53876   GCTGATCGCAACGCA       GGCGCCGC-CCCG TCAT CGGGTGCGGCGCC        TGCGTCGTTGCCCCG  93 67
LK412_RS14775 3078770 .. 3078788 - -11.6  -3.91911   CGCAGTCCAAGGAAA             GCCCGGCC CCA GGCCGGGT             TTTCCTTTTGCGCGG  81 44
LK412_RS14765 NONE
        pgeF NONE
        phaC 3074366 .. 3074385 -  -4.8  -3.61894   AACGCCCGCCAAGAA            TGCCGGCC TTGC GGCCCGCG             CGCGTACTCAAACCG  52 33
        phbB 3073541 .. 3073569 -  -9.6  -3.04263   ATTTTACGTGTAATA       CCGGGCGTCCG CTTCCCCC CGGAC-CCCGG        CCCCCTCCGAATGCG  57 44
        phaR 3072864 .. 3072883 - -16.4  -4.24204   GACTCATACGGAAAA            GGGGCGCC CGTG GGCGCCCC             TTTTCCTTCAGCCAG 100 52
LK412_RS14740 NONE
LK412_RS14735 NONE
LK412_RS14730 NONE
LK412_RS14725 3069555 .. 3069569 -    -7  -2.79183   GGGACCGCCACCATA               CCGCGC CGC GCGTGG               CCGCGCTACCAGATG  48 31
LK412_RS14720 3068571 .. 3068581 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS14715 3067455 .. 3067477 - -11.9  -2.50816   GCGGCAGCGACGAAG           GCGCGCCGG GACCG CGGGCGCGC           TATGGGCCGGGCTAC  58 115
LK412_RS14690 NONE
LK412_RS14685 3062136 .. 3062154 -    -3  -3.58396   CGTGAAATTAAAAAT             CCCACTCG TGC CCAGTGCG             TATGGCAATGCCTGC  49 56
LK412_RS14680 3060449 .. 3060465 -  -6.5  -3.39895   CGGTGTAGCAATGAA              CCGGC TTTGTGG GCCGG              CATGTTGGTTCCGCG  55 167
LK412_RS14675 NONE
LK412_RS14670 NONE
LK412_RS14660 3055782 .. 3055794 -  -3.3  -3.35679   GCTGCCCATCGACAA                CCCCA ATC TGGTG                GTCGAGCCGTTCGCC  47 465
LK412_RS14650 NONE
LK412_RS14645 NONE
LK412_RS14640 3052633 .. 3052668 -    -9  -3.14132   GCGCTGGCCGACGAA   CTG-GCTGGCCCGGCG TAGGCG CGCCGG-CCGGCTCAG    CGCTGGCCGTCGTGC  59 22
LK412_RS14630 3050305 .. 3050322 -  -5.5  -3.34398   CGGCGCGGCCAAATA             GCCGC AACGGTCG GCGGC              TTACAGGCAGCGTCT  51 86
LK412_RS14615 3047690 .. 3047730 - -16.2  -2.71011   ATGCCTTGGCAACGA  GCCGGCGCGGCGCTAT GGTATGCGG ATAGCGCCGCGCTAGC  TGTGAACTGTCAATA  77 21
LK412_RS14565 3039801 .. 3039847 -  -5.1  -2.97188   GGACAGGACGAGACA TGGCGCGCCACGCAGGCTCGA GGCCGGT CCG-GCCCGCGCATC-CGCCA GGGATGCGCGCGAGC  47 111
LK412_RS14560 3038865 .. 3038911 -  -5.1  -3.29461   GAAGTCTTTGCATAA CCCTAGGATACGCCATGCGCCGC GGC GCTATGCCTG-CGCATCC-AGGG CGGCCGCGCCGATCC  51 6
LK412_RS14555 3038573 .. 3038614 -  -4.3  -4.08216   CCAGGTCGGCGAAAA CCGGCTGACCATGATGTCGC AAG ACGGCACCCTGCCCAG-CGG CCCGTTGGCCGAGCA  60 73
LK412_RS14545 NONE
LK412_RS14540 3036528 .. 3036568 -  -6.6  -2.78596   TACCTCGTGACGATA CGGTG-CGCCGGGCGGCCG ATGG CGGCCGCCGGATGGCTGCG  CCTATGGTAGCCCGG  47 111
LK412_RS14535 NONE
LK412_RS14530 3035905 .. 3035928 -    -3  -4.07568   CGGCCGCGCGGAAAA          GAGCCAGC TTACCATC GCCGGCGC           GGCGCAGAAGGTCAG  59 37
LK412_RS14525 NONE
LK412_RS14520 3034654 .. 3034683 -  -7.7  -3.21395   AGCTGCTGGACAAGA       GCTGCGGCGCCGAG GCG CAAGGCGCCAC-GC       GGCTGGCGCGGGGGC  53 277
        clpB 3030020 .. 3030043 - -13.2  -5.48063   AGCGAACAGAAAAAA          CCCCTGG-TCC ATT GGATCCAGGGG          TTGAGAGACGCGGCG 100 69
LK412_RS14495 NONE
LK412_RS14490 3026767 .. 3026809 -   -14  -3.30418   CACGCACGAAACACA CGCACCTGCGCGAGAGGCTC AGT GAGCCTCCCGCCCCGGGACA GAGACCGTCTTGGCA  75 109
        tcfA 3024170 .. 3024203 -   -11  -2.68942   AGCGCCGGACAGAAC     CCCGATACGCCGCGC CTGGT GCGCGG-GCATCGCG     TCGACACCCTCAAGC  59 388
LK412_RS14475 NONE
LK412_RS14470 NONE
LK412_RS14465 3020994 .. 3021026 -  -9.7  -3.05463   ATGTGCGGCAGGCAA      CCCTGCCGGCGGG CTGCCGC CCCGCCGGCCGCA      ACAGCCGCGCCTGAC  57 47
LK412_RS14455 3018521 .. 3018542 -  -8.6  -5.47218   GCGTAGGGAAAAAAA           GCAGGCGC GCTCAG GCGCCGGC            GCGCAGCACCTGGCC 100 14
LK412_RS14450 3017157 .. 3017172 -  -7.5  -3.14132   GCGCGCCCTCATCAA              GGCGC GCCGCA GCGCC               GGCCACGGGCGCAAC  53 377
LK412_RS14420 NONE
LK412_RS14415 3011172 .. 3011183 -  -7.2  -4.15565   TTGAGTACCGTAAAA                CCGC CCAG GCGG                 GCCCACGAAACATGT  67 77
LK412_RS14410 NONE
        crcB 3010170 .. 3010212 - -13.2   -3.6502   CACGCCGGACTGAAA CCTGGCGCCCGCCGCCGGGC TCA GCGCAACAGCAGGCGCACGG TCGCCAGCCCCAGCC  79 3
         alr 3005851 .. 3005874 -    -8  -2.56596   TTGCGTAGCAATTCA          TGCCAGCAGG CCGG CCCGCCGGCG           ATCCGCACAATGCTC  50 39
LK412_RS14380 3004808 .. 3004830 -  -5.5  -4.45399   ACAGCAACAGGAAAA          TCTGGCGGCG TCAG CGC-GCCAGC           GTGACGATCCGGCCT  72 215
LK412_RS14370 3003024 .. 3003070 - -12.9  -2.73875   CGCCGCCGAACACGA GCAGCCCGAGGCGCGGCTA TCCGAGTTC CAGCAGCGCCGCCGGCTGC AACTGGCCATCGAGC  63 213
        radA 2999383 .. 2999393 -  -4.6  -3.13299   CCAGCAGACTCAAGA                 CAGG CTC CCCG                 GACGTGCCATCAACG  47 35
LK412_RS14350 2998493 .. 2998513 -  -6.7  -3.58905   AGCCCGCACATACAA            GGCGCGGCA AAA TGCCGCGTG            ACCTATAATTCGTTG  58 119
LK412_RS14345 2997930 .. 2997951 -  -2.1  -3.53012   CGCTGGTGCTGCAAA           CCG-TGGCGC TGG GCGGCGTCGG           CCTGCTGGGAGGATG  47 295
LK412_RS14310 NONE
        ispH NONE
        maiA 2989952 .. 2989973 - -17.3  -5.67063   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 45
LK412_RS14290 2989547 .. 2989568 - -12.3  -5.09762   AGCGCAATACAAAAA           GCCGCTCAC TTGC GTGAACGGC            CCTTTTGTGTCGACG 100 77
LK412_RS14280 2987543 .. 2987563 -  -6.7  -4.14392   CGGCAACCTGGAAAA            GACACTGGC CGC GCCCGTGAC            CGTGATCGTCGCCCA  67 417
LK412_RS14270 2986204 .. 2986230 - -12.2  -3.85698   GGCCGCCCGGACAAA         CCGGTTTGGCGT CGC ACGCCAGGCCGG         CTGTAATGTCTTGAT  81 92
        scpB NONE
LK412_RS14255 2982026 .. 2982045 -  -9.3     -6.13   ACACTCAAAAAAAAA            TGGGCTG CACGCC CAGCCCA             CCGTATTGCCTGGCC 100 453
        rimP NONE
        nusA NONE
        infB NONE
        rbfA 2976516 .. 2976545 -    -5  -2.60341   AAGGAGAAAAAGCAG       CGACGA-CAGCCC GGTCA GGACTGGTCTTCG       GGCTCGTCGGGAACA  42 10
        truB NONE
        typA 2973847 .. 2973873 - -22.4  -4.65895   GGCTGCATGTAAAAA         GGGTTGTGGCCG CCA CGGCCACAACCC         TTGCGCTGGCACCGC 100 66
        polA 2969137 .. 2969162 - -17.5  -2.69151   GGCTGTCAGACAGTA         TCCGGCCGGCG CGGA CGCCGGCCGGG          GCCGCATCAGTGCGC  80 32
LK412_RS14200 NONE
LK412_RS14195 2967346 .. 2967371 - -21.9  -2.52676   GACGCGGGCAACTGA         GGGCCTGCCCG AGCA CGGGCAGGCCC          CGGCCCGCTACAGGT 100 33
LK412_RS14185 2963982 .. 2964033 -  -7.2   -4.8048   GGGGTAGAGGAAAAA CTCTAACCC-CGGGTGCCTGTCCCC GCA GGGGACTGGCACCCGCAAACTCCAA CCCCGGCGTGCCTGT  84 117
LK412_RS14155 NONE
LK412_RS14150 NONE
        parC 2949811 .. 2949826 -  -8.2  -3.22475   TTCACGCTCAGAACA              CCGGCG ACAG CACCGG               CTGCCTGGGACGCAC  58 2
LK412_RS14140 2948386 .. 2948420 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS14130 2946870 .. 2946897 -  -9.7  -3.01712   CCCGCCGCTGGAATA        GCCGGTGGCGC CTAGCT GCGGCGCCGGC         TGGTGGCGCGCCAGG  57 9
        ugpB 2935561 .. 2935591 - -21.1  -3.18118   CCAGGTGAGAATACA       GGCGGCCGGCCGG TAATG CCGGCCGGCCGCT       ACAGGCACAGGCCAA 100 145
        ugpA NONE
        ugpE NONE
LK412_RS14055 2932531 .. 2932564 - -17.3  -3.44325   ACGTCGTACAAGTAA     GGCGCATGCGCGCGG CTCG CCGCGCACGGGCGCC      TGTCCCCGCTGCGGC  87 102
LK412_RS14045 2930512 .. 2930522 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS14040 2929302 .. 2929342 -  -3.1  -3.06261   TCGCAACCGCGAACA CGCG-CGC-CGCCTCGCCG CTGGT CGGCATCGCCTGCGTCGCG GTGGGCATCTTCTGT  42 191
LK412_RS14025 NONE
LK412_RS14020 2927631 .. 2927689 -  -2.9  -4.56597   GCCTTGCGCCAAAAA TCCCATTGTGCCGCAC-GGGCCGCGCGGC CGG GCCG-GTAGCCCTGCGCCCGGCAAGGGGA TCAGGCTGCCGCGGG  69 76
LK412_RS14015 2926717 .. 2926749 -  -9.7  -3.06671   AGATCGACCGCAACA      TGGCCATGCTGGGCG TGA CGCGCTGCACCGCCA      TGGCGCCCGGGCTGC  59 67
LK412_RS13950 2916980 .. 2917008 - -10.1   -2.9348   TGTAAATTTTACATA        GGGTGTGGCGCGG TCG CCGCGCCCTAGCC        GCCGTGCTGCGCGTC  59 20
LK412_RS13945 NONE
        arsC 2914889 .. 2914920 - -24.5  -3.90112   CGGCCGTCAACGAAA      GCGGCCTGGCGCG TCTTGC CGCGCCAGGCCGC       AATCACTCGCCCTCA 100 70
LK412_RS13905 2909648 .. 2909679 -   -10  -2.81547   CCTGCAGATCAACTA      TGCGCTGGACGACC GCCA GGCCGCGCAGCGCC       TGTTGCCGCTGGCCC  56 306
LK412_RS13875 NONE
        pdxK 2904069 .. 2904112 -  -8.3  -2.51133   GAGTCATCCACGAAC GCGATCGAGGTGAGCAGCTCCA CGC TGGA-CTGCG--CCTCGACCGC CTGCATCACGTGCAG  51 258
LK412_RS13815 2884112 .. 2884169 -  -7.7  -3.07113   GATCAGTCCAGCCAA CGCAACCGGGGCCAGGGCGC-GCGCCGCT CGTG AGCCCCGCGGCGCCC-G-CCGCG-CTGCG CTATGTGGACGACAG  53 66
LK412_RS13790 2879755 .. 2879778 -  -8.8  -3.53012   GCCCGGCGCCGCAAA          GC-GATGGCGC AGG GCGCCAGCTGC          GGCGGCTGTTCGCCG  61 350
LK412_RS13770 NONE
LK412_RS13765 2876681 .. 2876713 - -12.7  -2.73875   CCTCGGCGAACACCA     GGCC-GTCCGGCCC CAGTTC GGGCAGGACCGGCC      GCGCCGCGCCAGGCG  65 244
LK412_RS13755 2873084 .. 2873116 - -10.5  -3.05963   ACGTGCAGGTCAATA     CCCTGCGCGCCGCC CTGCCC GACGGCGCGC-GCG      TGGGCACGGTCGACA  59 285
LK412_RS13740 NONE
LK412_RS13735 2867150 .. 2867165 -  -4.6  -3.41051   CTACTTCGACGAGAA              CCGGCG CTTC CACCAG               GCCATTGCCGATCTC  52 291
LK412_RS13725 NONE
LK412_RS13720 NONE
LK412_RS13715 2862665 .. 2862677 -  -3.3  -2.64243   GGATATGCGACAGCA                GCTTC ATG GACGC                GGCTCCTGCGGGGCT  39 16
LK412_RS13710 NONE
LK412_RS13705 2860093 .. 2860117 - -13.5  -3.21416   CAGCGCCATGAGCAA          GGCCGGGCTGG ACG CCAGCCTGACC          GCCGTCGGCCCGCCG  72 427
LK412_RS13685 NONE
LK412_RS13680 NONE
LK412_RS13675 2854110 .. 2854146 -  -9.4  -3.02511   GGTAGCCGGCCAAGA   CGGACGGTATCTGTCCC CGCA GGGACAGCCAGCG-CCG    GCGACGGGCTACTTC  57 34
        flhB 2847812 .. 2847851 -  -3.5  -3.67296   CAGCACCGAGGGAAA  CGCGGCGAAATCCA-GCG GCTTG CGCGTGAACATCGCCACC  AGCAGGATCATCACC  54 199
        flgB NONE
        flgC NONE
        flgD NONE
LK412_RS13600 NONE
LK412_RS13595 2837792 .. 2837822 -  -2.2  -4.32034   GCATCATGATGAAAA       CTCCTGGCGCGGCG CTT CGGCGCGCGCGTTG       ATAATCAGCTGGCCG  65 30
        flgG NONE
LK412_RS13585 NONE
LK412_RS13580 NONE
        flgJ NONE
        flgK NONE
        flgL 2830794 .. 2830819 -   -14  -3.05384   CCGCTTTCCATCGAA         CACGCGCTCC TCGAGG GGAGCGCGCG          CCATTTCCCGACTAC  72 57
LK412_RS13560 2828917 .. 2828928 -  -2.2  -3.68853   GCAAAAACCGCCAAA                CAGA ACTA TCCG                 GCCGCCATTTCGCCC  51 49
LK412_RS13555 2827110 .. 2827145 - -22.6  -4.56597   CGCTGCCTGTAAAAA    GACGATCCGGCGCGGC GCTG GCCGCGGCGGATCGCC     GCTTTCCCGTCCTGG 100 92
LK412_RS13550 2825554 .. 2825569 -  -4.6  -3.78419   GGAGGAAAGATACAA              GGCACC CAGC GGCACC               CGACGGCACCCGACG  58 47
LK412_RS13545 2824312 .. 2824338 -  -2.9  -3.90744   CTGGCGGGCAAATAA        CCCCTTCGGG TGCCTGTC CCCGC-GGGG         ACAGATACCGTCTTG  58 45
        fliE 2810965 .. 2810986 -  -7.2  -2.88544   CTGGATGCCCATATA           CCGCCGCA ACTCTA CACGGCGG            TGGCCGAGCTGCTGG  50 518
        folC NONE
LK412_RS13415 2804274 .. 2804290 -  -3.5  -3.31415   GACGACGAAATCGAA              GCCGGTC ACT GTGCGGC              GATGAAACCGTTGTC  47 14
LK412_RS13410 NONE
        purF NONE
        rpsB 2795825 .. 2795850 -  -3.9  -3.08088   AAATTCGCTAAGACA         TGGCCCGGC AAGCATGA ACCGGGACA          TATGGTTGATTCGAT  45 159
         tsf 2794873 .. 2794907 - -13.5  -3.83144   GTAAGACAAGAAATA    GGCCGGC-AGTTCGGG AAGC CCCGCCCTGGCCGGCC     CCTACGATGACGCGT  83 40
        pyrH NONE
         frr 2793481 .. 2793532 - -10.8  -3.10344   CGCGTACGGAACAGA TTCCGATATCGACACCGGAGCCGT CGAT ACGGCCCCGATACCTCAACCGGAA TTATACGGTCATGAT  64 26
        uppS NONE
LK412_RS13355 NONE
LK412_RS13350 2790515 .. 2790543 - -10.1  -3.59979   CGGGTGGACGCGAAA        GGCGGCCCGGCGC GTC ACGCCAGGCCGAG        ATTGCCGGCGAATGA  67 11
        rseP NONE
        bamA 2786693 .. 2786726 -  -2.9  -3.72893   TATTGTGCCACTAAA     CTGCGGGACGGCCGG GCAA CCGGCCATTTCCCAT      GTTTTCATGCGTAAC  53 65
LK412_RS13335 2786063 .. 2786073 -  -2.4  -2.64218   AGGGTCCAGCAGAAC                 CGGC ATG GGCG                 TGCTTATCGGCCCAG  38 29
        lpxD NONE
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB NONE
LK412_RS13305 NONE
        ppsA 2777710 .. 2777730 -   -14  -5.40072   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 46
LK412_RS13285 2776385 .. 2776404 - -10.6  -3.09015   TTCACAGCTAGTGAA            GCCTGCCG TCGC CGGCGGGC             AAGGTCATGGTTACG  64 36
LK412_RS13275 2774352 .. 2774375 - -17.4  -3.59979   GGCGCGGACGCGAAA          GGACGCGCCG CGGC CGGCGCGCCC           GGGTCGAACCTCACG  89 36
LK412_RS13270 2773138 .. 2773158 -  -9.7  -3.67622   CAGCGCGAAAAGGAA            CGTGTCCTG AAG CACGACACG            CGCGTCAACCAGCGC  68 30
LK412_RS13260 NONE
LK412_RS13255 NONE
LK412_RS13250 2770709 .. 2770722 -  -2.4  -2.62616   GGACGCTCGACATGA               CGTT AACGTA AACG                TAAGTCGTTGGCGAG  38 129
LK412_RS13245 NONE
LK412_RS13240 NONE
        mmsB 2767324 .. 2767340 -  -4.3  -3.08464   GTATCAGGCATGCAA              GCCTCTC GCG GAATGGC              CCTGGCCGCCCGGCC  47 50
LK412_RS13230 2766868 .. 2766895 -  -6.8  -2.90075   GGCGCGCCAAGTATA        GGCCGCCGCGCC GTTC AACGCGGCGTCA         CCCGCACCGCGGTCA  50 12
LK412_RS13225 2765920 .. 2765954 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 204
        carA NONE
        carB 2758380 .. 2758407 - -14.2  -6.15828   GGCACCAAAAAAAAA        CCCATCC-CGGCA TGG CGCCGTGGATGGG        GCGGACGTTCGAGGC 100 47
LK412_RS13170 2751759 .. 2751769 -  -4.6  -3.07113   CACCAGGTCATCCAA                 GCCC ACT GAGC                 CCCCTATTCGCGAGT  45 156
LK412_RS13165 2751448 .. 2751458 -  -2.6  -3.57144   CGCGCCACCTGGAAA                 TAAT CGG ATTA                 CATCTGCAAGCGCTG  48 23
LK412_RS13160 2750367 .. 2750386 -   -10  -4.07568   GGCTTCGCGCGAAAA            CGGGGTTA CGGT CAACCCCG             ATTATGACACTGCCG  78 27
        aroC NONE
LK412_RS13150 2748368 .. 2748416 -  -8.6  -2.62184   GGCCGCTGGACACCA CGATCGCGCGC-CTGGCCGCGCC CGTC AGCCCGGCCTGAACGCGCGGCCT ATTTGGCGGCCTGGC  52 24
        apbC NONE
LK412_RS13125 NONE
LK412_RS13120 2743456 .. 2743466 -  -3.2  -3.61356   AGTAGTCATGGCAAA                 CAGA CTT CCTG                 GCTGTATCAATCGCG  49 32
LK412_RS13115 NONE
LK412_RS13110 2740653 .. 2740670 -  -8.4  -3.29829   TATAGCTTCCGACAA             CCGCAC GCCATG GTGCGG              TGCCCGCATGCAGCA  58 88
LK412_RS13105 2740357 .. 2740371 -  -5.6  -3.13403   TCTTGGTCAGCAACA               TGCCGG GCT CCGGTA               TCAAACGAGGGTGGT  49 26
LK412_RS13100 2736869 .. 2736891 -  -3.2  -3.01712   CGCGGGTGCGGAAGA           TGTCGGCCAC CAC GTCGCCGTCG           CCGGCCAGCAGCGCC  42 522
LK412_RS13090 NONE
LK412_RS13085 NONE
LK412_RS13080 2734895 .. 2734945 - -10.2  -3.61398   TTTCGCGCGCAAGAA GGTCCGGCGCAC-GCGCCCGGCC TGAGGC GGCCGGACGCCGCGCGGCTTGCC GCCCGGGCTACTGGC  67 33
LK412_RS13065 NONE
LK412_RS13060 2731269 .. 2731289 - -16.9  -4.07687   ACGCCCCGTGCAAAA            GGCCACGAG TGT CTCGTGGCC            TTTGGATTTCGTGCT 100 121
        leuC NONE
        leuD 2728984 .. 2729020 - -18.6  -3.37556   GGGAAAACAAGGCAA    GGGCCCGCCGCGCGCG ATCAA CGCGGACGGCGGGCCG    GCAGGCAACGCGTCA  93 38
        leuB 2727811 .. 2727827 - -10.1  -4.58685   AAATTGTGCGAAAAA              GCCGCAA AAA TCGCGGC              CCTTGCGCACAGTGG  93 73
         asd 2726491 .. 2726547 - -11.8  -4.07568   CCTTGCCGTCGAAAA CGGCGCGCCT-GC-G-A--CAAGGGCGCC CGCG GGCGCCCTTGTATCCTGCCATGCGCGCCG GCGCCGCGCGTCAGG  82 36
LK412_RS13035 NONE
        truA 2723871 .. 2723883 -  -4.7  -3.61398   CTGGGTGTGGAAGAA                TGCGC TGA GCGCG                GACCGTTTGCGTAAA  52 130
LK412_RS13025 2722744 .. 2722760 -  -6.5  -3.53012   CGCGTCGCGTCGAAA              CGGGG TTATTTG CCCCG              CGCCACCGTCGCCAT  56 14
LK412_RS13020 NONE
LK412_RS13015 NONE
LK412_RS13010 NONE
LK412_RS13005 2719399 .. 2719419 - -15.5   -5.1101   CGATCAGGCAAAAAA            CGCCAAGTC AGC GACTTGGCG            TTTTCCGTTTCGATA 100 62
LK412_RS13000 NONE
        yaaA 2717299 .. 2717336 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
LK412_RS12990 2715601 .. 2715615 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  64 494
LK412_RS12965 2711394 .. 2711421 -  -7.6  -3.88291   GATGACTCCTAGAAA        CGGGCCGCATTG TACG CGATCCGACCCG         AGTTGATCTCAATCC  66 34
        rpmF NONE
        plsX 2710085 .. 2710101 -  -4.4  -3.14211   AGCTTTTTCCATCAA             GCGG-TG TCCC CAGCCGC              GCCGGGCGCGACGGC  47 5
LK412_RS12950 2709048 .. 2709095 - -11.9  -2.50816   TCGGTATGGAGGAAT GGCGG-CGTGCGCGGT-CGCGCA CAGG CGCGCGCAGCGCGCCCTTCCGCC TACATGCGGGCCAGC  61 25
        fabD NONE
        fabG 2707283 .. 2707316 - -12.3  -4.03234   GCGTTTCCACAGAAA     CGCGCGGCTGGGC TTGGATGG GCCGCGCCGCGCG      CTTCTCACTATTGCA  83 33
        acpP 2706835 .. 2706855 -  -4.5  -3.55563   ACGGCATTCCTGAAA            CCGCCCCGA TTC CCGGCGCCG            CCCCGAAGTGTTCGA  52 72
        fabF 2705465 .. 2705499 -  -6.5  -3.69216   CGGTTATCGAAAATA    CCGC-CGTCCGGGTTCA ACT CAAACCCG-ACGAACGG    CCATCGAACCGTTGG  59 9
LK412_RS12925 NONE
        rpoE NONE
LK412_RS12915 2703864 .. 2703877 -  -2.3  -3.54408   GCGCATGTAAAGCAA               CGGTG TCAT CAACG                TCCTGCTCCGGCGTC  48 20
LK412_RS12910 NONE
LK412_RS12905 2701228 .. 2701252 - -22.9  -4.65895   CGGGCGAGCCAAAAA          CGAGGGGGCGC CAT GCGCCCCCTCG          TTGCGGCAACCAGCC 100 62
        lepA NONE
        lepB 2698467 .. 2698480 -  -3.7  -3.17392   TAGCGGTCAATGGAA               GCGGC CAAT GCGGC                TCAAATCGCTGAAGT  45 3
         rnc NONE
         era NONE
        recO NONE
LK412_RS12875 2695126 .. 2695152 - -15.9  -3.14344   GATGTCGCGGACGAA        CAG-GCCGCGCG GGCC CGCGCGGCGCTG         GGCGCGCTGGGCATC  78 157
        lptF 2686449 .. 2686474 -  -6.1  -3.01791   ACGTGCTGCCCAACA         GCCAGGTGGTGC TGC GCAGCACC-AGC         GTCATCGCCCAGTAC  48 280
LK412_RS12820 2684343 .. 2684356 -  -2.3  -3.14132   CTTGCCGCCGATCAA               TAGCG ACTT CGCTC                ATTTCTCTGCTCCTC  42 124
LK412_RS12815 2682780 .. 2682803 -  -8.2  -3.15544   CTGCAGGTTCATGAA          TTGGCCCCTGT TAG AC-GGAGCCAA          TTATAAGTAATATAG  56 98
LK412_RS12810 2681623 .. 2681657 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS12800 2680157 .. 2680174 - -14.1  -4.41895   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 77
LK412_RS12785 2676619 .. 2676665 - -21.5  -2.62184   TGCTGGTGTAGAGCA GCCGGCGCTTGCCGGCGCGCGC ATCG GCGCGCG-CGCCCAGCGTCGGC ATGGTCAGCATGATG 100 294
         acs 2673302 .. 2673332 - -14.7  -4.17089   TGCAAAGCCGGAAAA      GGCACGGGCCGGTC ATGC GACCGGCCCG-GCT       GGCTACAGACTGACG  95 101
LK412_RS12770 NONE
        ltaE 2671321 .. 2671346 -   -14  -3.28712   GCGGGCGGCTGAGAA         CGC-GCCGCGC TCAGC GCGCGGCCGCG         CAATGCCCGCGTACC  75 10
LK412_RS12740 2666173 .. 2666212 - -14.2  -3.62597   GGTACGCGTGAAGAA  GGCCGGAATGCCG-GCGCC GCC GGCGCGCAGCTTCTCGGCC  AGCGTGCCCTGCGGC  80 439
LK412_RS12730 2665116 .. 2665133 - -14.1  -5.75945   ATGGGCGAAAAAAAA             CGCCGGC TAAC GCCGGCG              CCTTACATACAAAAA 100 51
LK412_RS12725 NONE
LK412_RS12720 NONE
LK412_RS12715 2661103 .. 2661126 -  -2.3  -4.71426   GGTTGAGGAAGAAAA          TGCGGCAGGC GCCAA GCC-ACCGCG          TTCAATACGCGCCGC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 2657555 .. 2657612 - -13.4  -3.48276   CGGCCCTGGAGATAA CAGGGC-CGCCGCGCGGGC-GGC-CCG ACCGGCG CGGCGCCTGCATGCGCCGCGCGCCCTG CCCTACTTGCGGTCT  75 28
LK412_RS12695 2656455 .. 2656467 - -10.5  -3.38291   GGGAGAATGTCAGAA                GGCCG TCT CGGCC                AGCCACTGGCGCCAC  65 7
LK412_RS12685 2653631 .. 2653641 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 194
LK412_RS12680 NONE
LK412_RS12675 NONE
        kdsA NONE
LK412_RS12665 NONE
         eno 2648403 .. 2648449 - -14.3  -3.09581   CAAACGCGGAAGACA GCGGT-TTCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGATTACTGA CCATTAACGCAGGTT  73 29
        ftsB 2647975 .. 2647990 - -10.4  -5.86332   CCAAGGCAAAAAAAA              CTCCCC TGGC GGGGAG               TGTTGGCGCGTCCGG 100 50
LK412_RS12645 2645422 .. 2645442 -  -4.5  -3.04792   TGATCAGGCGCAAGA            GCGGCGTCA TTG CGGCGCCGG            GGAGCGACTGAGCCA  45 11
LK412_RS12640 NONE
LK412_RS12635 2644177 .. 2644204 -  -6.2  -3.39784   CCAGGCCGAACAACA        CGCGCAGCGCCTG GCC CAGG-GCTGGCCG        GGCGGAGCCGGGCCG  55 294
LK412_RS12555 NONE
        sdhC NONE
        sdhD NONE
        sdhA NONE
LK412_RS12535 2623106 .. 2623116 -  -6.8  -3.01906   CCAATAAACACTAGA                 CCGT ACG ACGG                 ACCATCAGTTCCTTG  51 10
LK412_RS12530 NONE
LK412_RS12525 2621442 .. 2621455 -  -9.5   -5.4505   GCCGGCAAGAAAAAA               CCGCC CGAA GGCGG                TTCTTTCAGTGGACG 100 54
LK412_RS12520 NONE
LK412_RS12515 2620063 .. 2620097 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 210
LK412_RS12490 NONE
LK412_RS12485 NONE
LK412_RS12480 NONE
LK412_RS12475 NONE
        potA NONE
LK412_RS12465 NONE
LK412_RS12460 NONE
LK412_RS12455 NONE
LK412_RS12450 2607048 .. 2607066 -  -5.2  -4.36914   TGCTGGCCGAGAAAA             TCACCGAC GCG GCCGGCAA             CATGGCGCCGACGGT  69 331
        rmuC 2605113 .. 2605152 -  -5.5  -3.90744   TTGGCGGCGAAAGAA  TTGGGCGGACCGCCCGCC CCGCC GG-GGGCTCTCCGCCCCC  GCGCCTGCTCCTCAG  63 37
LK412_RS12435 2603436 .. 2603450 -    -7  -2.96984   GAAATTTAGCAGATA               CCGGGC CAG GCGCGG               GCCAGAATCGGGGCC  51 1
        rpiA 2602583 .. 2602611 -  -5.2  -4.07885   TAGTGCCCCTGAAAA       CGCGGTTGCGCAG AGGG CTGCCCGACC-CG        CAAGGTTATGACCCG  64 106
        phoU 2601562 .. 2601617 -  -8.1  -3.05596   CAGGCGCGGATTGAA TCGGCCTA-TGGCGAGGCGCCCG-CGC TGCT GCGGCTGGCGCCGGGCGAGCAGGCCGC CTGGCCATATGAACC  52 166
        hrpA 2593995 .. 2594035 - -17.6  -3.57263   ACTGGCACCCGCAAA CTCTCGGGGTGCCTGTCCC CGCA GGGACAGGCA-CCCGTGGG  ACAGCCCCCTACCGC  90 34
        dnaE NONE
LK412_RS12390 NONE
LK412_RS12385 NONE
LK412_RS12380 NONE
LK412_RS12375 2585323 .. 2585354 - -13.6  -3.04144   TGTTCATCTGGAACA      GTCCCGCCGCGCCG GCCC CGGCACGGCGCGAA       TACGACGCGCCCTAT  69 250
LK412_RS12365 2582890 .. 2582907 -    -4  -3.76641   AGCGCAATACGCAAA             CGTCGC TTATCC GCGGCG              GCGCCTGTCTTCATA  57 14
LK412_RS12360 2581326 .. 2581354 -  -2.3  -3.27743   CATCATCAAGGAATA       CGC-CGGCCTGT TCGTCT ACTGGCTGCGCG        GCTGGGTGTAACGGC  44 438
        msbA 2577597 .. 2577613 -  -6.5  -3.53012   TGGCCGCCGCCGAAA              CCATGGC GCC GCAATGG              GCGCAACAGGTGTTG  55 148
LK412_RS12330 NONE
LK412_RS12325 2574330 .. 2574343 -  -3.7  -4.74103   GGCCGAACTGAAAAA               GGCGC TCTC GCGCG                ACCGCACGCGCATGA  77 418
LK412_RS12310 NONE
LK412_RS12305 NONE
LK412_RS12300 2569556 .. 2569594 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
LK412_RS12295 2566321 .. 2566331 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 139
         rrf 2566112 .. 2566146 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
        vag8 2562958 .. 2563011 -  -6.6  -3.76224   TGCCCATCTACGAAA CCGCCGCCCTGCTGCGCAGCGC-CGGC ATC GCCGTACCCTGAGC-G-ACGCCGGCGG CGCGCGGTCACCAGC  62 33
LK412_RS12245 2556076 .. 2556108 -  -4.6   -4.1899   CCAGTGTATGCAAAA      CGCGGCGGCCGTCA CAATC TGCCGCCTGCCGCT      CAGCGTCGCCGCGAC  66 25
LK412_RS12240 2554588 .. 2554610 -    -9  -3.03441   CATCACCGCCGAACA           GGTGCGCGAC ATG GTCGCGCGCT           TTGCCCGCACCCTGG  55 107
LK412_RS12230 2551789 .. 2551847 - -15.8   -3.6106   TGGAATATGTCGAAA GCGGCCGGCGCGAAGGCGCGCGGCTGC GCATGG GCGG-CGAGCGCGTGCGCGCCGACAGC GGCGGCTACTACATA  85 396
LK412_RS12195 2544300 .. 2544329 - -18.5  -3.09492   TCGCCAACGGCAAGA       CGCGCGCCCAGGC CGAA GCCCGCGCGCGCG        AACTGCTGACCCTGG  85 432
LK412_RS12170 2537565 .. 2537613 -    -8  -3.67296   CATTATCGATCCAAA CGGCGCGCGCGGCCAAGCGCGGGC CCA GCCGGCG-TCAGGCGC-CGCTCCA GGCCTCGGCGTTCAG  63 11
LK412_RS12165 2536365 .. 2536403 -  -8.7  -3.03159   CCAAGTCCGCCAAGA  GCGCGGGCGGCGGCGCGGC CGA GGCG-GCGGCCGGC-GCGC  ACTGAGCGCCAGGCC  55 49
LK412_RS12130 NONE
LK412_RS12125 2528544 .. 2528563 - -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 54
LK412_RS12110 2525260 .. 2525274 -    -7  -3.01924   GACGCTGGCCGAACA               GGGCGG CGC CGGCCC               GCACCTGATTACCGC  52 478
LK412_RS12095 NONE
LK412_RS12090 NONE
        phnX NONE
LK412_RS12080 2519309 .. 2519340 -   -10  -4.07568   CTGCTTCCGGGAAAA      TGGGCGGGCCGCCGC CGT GCGG-AGCCCGCCGC      CGATGCGGGATTACT  78 36
LK412_RS12070 2517655 .. 2517699 - -15.6  -3.17075   CGCCGGGCAAGGCAA GGCGGCC-GAGCTGCTGGCGC AGGC GCGCCAGCTGGCCTGGACGCC GCTGGTCGACGCCGA  77 197
LK412_RS12055 2514494 .. 2514515 - -15.1  -3.01712   CGCGCTGGTCGAACA           GGCCGCGGC GGCG GCCACGGCC            ATGGAAGAACAGGCC  74 197
        greA 2511686 .. 2511706 -  -9.6  -3.07104   CGACAACGATACAGA            CGCCCGGC GCACG GCCCGGCG            TTCAGGAATTCGGAT  57 238
LK412_RS12035 2509653 .. 2509690 -  -7.5  -3.16742   CTGAACGCTCACGAA   CGCGACCTGCGCAGCCGC CTG GAGGC-GCTCAGCGCGCG   CGGAGACGGCGCGGT  53 203
       bsp22 NONE
LK412_RS11985 NONE
       bcrH1 2501987 .. 2502000 -  -3.1  -3.17444   GGAGAAACAGACATA               TCGAA CCTC CTCGA                ATTGAAATCTTGACG  44 58
        sctB NONE
        bopB NONE
       bcrH2 NONE
        bcr4 NONE
        bscI NONE
        bscJ NONE
        bscK NONE
        bscL NONE
        bscN NONE
        bscO NONE
        bscP NONE
        bscQ NONE
        bscR NONE
        bscS NONE
        bscT NONE
        bscU NONE
        bscW NONE
        bscC 2487817 .. 2487839 - -14.2  -2.70932   GCGCTGCGCGAACGA           GGCTACGACA GCG TGCCGTAGCC           CCCCTGCCCGGGCCA  69 44
LK412_RS11875 NONE
LK412_RS11870 NONE
LK412_RS11865 2484722 .. 2484736 -  -3.4  -3.61764   CCATCAATCTGGAAA               CGGCGC GGC GCATCG               GCTTCGACCCACCGG  51 129
LK412_RS11850 2478678 .. 2478694 -  -5.1  -2.78463   ACCTTGCGCAGCACA              TTGTGCG CGA CGCAGAA              CCTGCCTGCCGGCGC  43 398
LK412_RS11835 2476753 .. 2476803 -  -5.5   -3.7108   AGCTGGACACCGAAA TCTACG-ATCG-TGAGCTGGCCG GCTGGAT CGGGCAGCGCATCGACGCGCAGA TCCGCCACGCGCGGC  58 123
LK412_RS11825 2475169 .. 2475191 -  -4.1   -5.4505   CCGCCCAAGAAAAAA          GCACCC-GGC TTGC GCCTAAGTGC           CTGTTTTCAAACGAA  90 47
        bapA 2472001 .. 2472041 -   -11  -3.53012   GGGTCCCGGGCCAAA  GCGCGCAGATCCCGGCCG TTACC CGGCAAAAGCCTGCGCGC  AGGCCGCGCGCCCGT  70 65
LK412_RS11815 2471350 .. 2471384 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS11785 NONE
        ectA 2462932 .. 2462942 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS11775 2461461 .. 2461489 -  -2.9  -3.59738   CACGATACGCTCAAA        GCCCGCCTGTCCG ACT CGGTCAAGGACGC        CATGCGCGCCAAGGC  50 464
        hmpA NONE
LK412_RS11760 2459555 .. 2459592 - -11.4  -2.67021   GCGCCAAATAGCAAT  CCGGACAGCGGCCATAACC TAA GGTT--GGCCGCCG-CCGG  CGCGGCCGGACCTAC  61 37
LK412_RS11755 2457963 .. 2457973 -  -8.2  -3.06796   CCCGAGCTGATCGAA                 CGGC AGC GCCG                 CGAACTGCTGGATGC  55 248
        mltG NONE
         tmk 2451543 .. 2451562 -  -2.8  -3.16564   CTGCCAGGGCAGGAA            GCGAC-CGA GGC TCATGCCGC            TTGCGCCACCAGCTC  44 17
        holB 2450487 .. 2450500 -  -9.5  -4.03078   GGATCACAGGAGAAA               CGGGC CGTG GCCCG                ATCGTCACTGGCAGG  75 30
LK412_RS11720 NONE
LK412_RS11715 NONE
LK412_RS11710 2447862 .. 2447881 -   -15  -5.52384   CCCCGAGCAAAAAAA            TGCCGCCC CGGT GGGCGGCA             CGTGATCAGGTGGAG 100 94
LK412_RS11705 2446983 .. 2447000 -  -5.6  -4.67982   TTGGAGTGAAGAAAA             CCGTAT GGATGG ATACGG              CCACAGGGATACATC  77 39
LK412_RS11700 2446017 .. 2446032 -  -2.5  -3.90744   CGTGCCGCGAAAGAA              CAGCA GGTATA CGCTG               CACAGGTTGTAGATG  56 189
LK412_RS11690 2444630 .. 2444686 -  -7.3  -3.65902   GGCATCGCAGGCAAA GCCCAGCACCGCGGCGTCGCCGGCGCCGG CGT CCTGCCCCAGCG-CG--ACGATG-TGGGC CAGGCGGCGCGTATC  61 100
LK412_RS11680 2442263 .. 2442291 - -19.6  -3.04398   GCCTGCGCTGAAAAC       GGC-GCCGGCCCC TTGC GGGGCCGGCTGCC        TGGTACGCCGATGCG 100 68
LK412_RS11605 NONE
LK412_RS11600 2426634 .. 2426650 -  -2.9  -3.71645   AACGTCATATTGAAA              TGGACCG ATG CCATCCA              AGCCATAGGATACAA  53 98
LK412_RS11595 2425542 .. 2425566 -  -6.3  -5.24129   GCGCTGGAGAAAAAA          GCGCAAGGCCA GGC TGGCCCCTCAC          CCGAAATCGACGGCC  93 173
        fhaB 2410072 .. 2410095 -    -3  -3.40403   GCCGGCGCATGAGAA          CCCTGCGAAT CCCC ATGCGCCGAG           CCGGCGGCAGGCCGC  48 47
LK412_RS11575 2409534 .. 2409544 -  -3.2  -4.45261   GAAAGAAATGGAAAA                 CAAG AAT CTCG                 TGACAAGCCGACCAT  69 85
        fimB NONE
LK412_RS11565 NONE
LK412_RS11560 NONE
        fhaC 2403042 .. 2403057 -  -4.6  -2.78384   GGCTGCCGCAGCACA              TGACGC TGTA GCGTCG               CGGCCGCGTTCTCGC  43 46
LK412_RS11510 2394800 .. 2394828 - -14.6   -3.6106   CGTAACAGGGGGAAA       GGC-CGCGCCCCGC CCA GCGGG-CGCGCGCC       GATGCATGATGGATT  81 40
LK412_RS11505 2391046 .. 2391103 - -16.2  -2.71712   CGCCTTGTTCGAAAT GCGCGATGGCGGGCTGACCCTGCAGGT GCATG ACCGGCGCGACCAGCCCGCCTT-GCGC GTGACGGTGTGCCCG  77 63
LK412_RS11490 2387885 .. 2387931 -  -8.6  -4.18018   CCGCCTGATCGAAAA CACGCGCGCGCGCGGCTACTC GGTGGT GGGCAACCACGCG-GTGCGCG GCGCGCTGGGCGTGG  75 197
LK412_RS11480 2386132 .. 2386149 - -12.7  -4.19735   GGCTCCAAAAGCAAA             GACGCCC TCGC GGGCGTC              TTCTTCACGCTCGAG  91 53
LK412_RS11470 2384220 .. 2384233 -  -9.5  -2.81966   GGAAATGCCATGACA               CGCCG GTGA CGGCG                CGCGGCCGCGCATCC  56 85
LK412_RS11465 NONE
LK412_RS11460 2381663 .. 2381688 - -19.1  -4.56597   CCGCGCCGGGAAAAA         GAGCCTGTCCC CGTC GGGACAGGCTC          TTTTCATTTGGCGTA 100 29
        cysS NONE
LK412_RS11435 NONE
LK412_RS11430 2375983 .. 2375993 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS11425 2374890 .. 2374903 -  -2.3  -2.55565   AGATCGGAAAGAGAG               GGAGC CGGC GCTGC                GGGGGAGGTGGACAT  38 101
        tilS 2373804 .. 2373826 -    -9  -3.28924   TACTCTGGCTGACAA           GCCCGCATAG GGT CTGGGCGGGC           AAAGCTGAGTATTTT  61 83
LK412_RS11415 NONE
LK412_RS11410 2372309 .. 2372330 - -14.5  -5.45802   GCCGCAAAAGAAAAA           GGCCCTTGA TTGC TCAAGGGCC            TTTTTGATCTTTGGC 100 37
LK412_RS11400 NONE
LK412_RS11395 NONE
LK412_RS11390 NONE
LK412_RS11385 NONE
LK412_RS11380 NONE
LK412_RS11375 2366135 .. 2366153 -  -4.5  -3.58522   AGGATCACGGTGAAA             TCCGTCA TGCGC TGCCGGA             TCACTTGGCCGCGCG  52 26
LK412_RS11370 NONE
LK412_RS11365 NONE
LK412_RS11360 NONE
LK412_RS11355 2362578 .. 2362588 -  -2.4  -2.66316   TGGTGCACGACATCA                 CCCC GTC GGTG                 TCCACGCTCAATGAA  38 477
LK412_RS11345 NONE
LK412_RS11340 NONE
LK412_RS19915 NONE
LK412_RS11335 2358364 .. 2358386 - -10.6  -2.70932   CGCCGCGGCGAACCA           CCATGAGGGT CGC ACGCTCATGG           CGCACCGAACAGCGA  60 20
LK412_RS11330 NONE
LK412_RS11325 2356457 .. 2356473 -  -5.1  -4.12198   TACAAGGTTGTAAAA              CAGGC GCCGCCG GCCTG              CCCGCCTGTAAGGGA  64 45
LK412_RS11320 2356250 .. 2356277 - -18.6  -5.04385   GACAGGCGCAAAAAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTCGGTACTGCTTGC 100 83
LK412_RS11275 NONE
LK412_RS11270 2347597 .. 2347617 -  -4.5  -3.19157   GACGAAGCGGACGAA            CTGGCCGCC TGG AGCGGGCCG            CCCATGCAGCGGCAA  47 99
LK412_RS11245 2341268 .. 2341281 -  -9.5  -3.53091   AGCCGGCTTTTCAAA               CCGCC CGGC GGCGG                GTGCGGCGATACAGG  64 7
LK412_RS11240 2341101 .. 2341125 - -17.2  -4.98531   CGCCCAAAGCAAAAA          GCCGCCATGC ACAAG GCATGGCGGC          TTTTCATATTGGCGC 100 35
        bpsR 2340396 .. 2340415 -    -5  -4.20696   CGACCAAGCCGAAAA            TTAGAGCG TTGA CGCTTTAA             TTCGCCTAGTATTTT  66 43
LK412_RS11230 NONE
LK412_RS11225 2337793 .. 2337831 -  -8.8  -2.96873   ACCTCTAGGAAATCA  CGCATCGTCGCG-ACGA TGCATC CCGCCCGCGACGGCGCG   CCCGCGACACGGACG  55 54
LK412_RS11220 NONE
LK412_RS11215 NONE
LK412_RS11210 2334143 .. 2334170 -   -12  -3.01924   GAGCCGCCGGCAACA        GGTGCCTGTCCC AACC GGGACAGATACC         GTCCTGGCGGTCAAG  65 134
LK412_RS11185 2328750 .. 2328796 -  -8.6  -3.53224   CAGCGCGCGCGCAAA CGCCAGCAGGTCCTCGGCCTG CACATC CAGGCCATAGTCCAGCTG-CG GCCCCGACTGCGACA  62 262
LK412_RS11175 NONE
LK412_RS11170 2326413 .. 2326441 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGCGCGGTGG  56 86
LK412_RS11165 2325025 .. 2325048 -    -6  -3.15544   GCGCACCGCGATGAA          CACGT-CCGGC GTG GCCGGCACATA          ATCGGACGCCGCACC  51 271
LK412_RS11155 2321405 .. 2321417 -  -5.5  -3.36749   GACCGGCAAGACCAA                GACGC GCG GCATC                GAACTGGAATTCCGC  49 423
LK412_RS11140 2317570 .. 2317580 -  -8.2  -3.54424   GTCCAGCTCGCGAAA                 GCCG CCC CGGC                 TCAGCAGCAGGCCCA  62 421
LK412_RS11120 2313954 .. 2313979 -  -3.3  -3.61517   ATTTCGCGCGAATAA        TGGCCGTCGCC GGTTCA GGCG-C-GCCA         GCGGCGGTAGCCGCA  49 82
LK412_RS11115 2312419 .. 2312432 -  -3.7  -3.01712   CCGCCGCGGCGAACA               CGCGC CACT GCGGG                CTTTGCGCCGAAAGC  44 100
LK412_RS11110 2310806 .. 2310820 -  -3.4  -3.96051   ACAGAACAGATGAAA               CATGGC GTA GCCTCG               TTGATGATGCCGCGC  58 131
LK412_RS11105 2309746 .. 2309774 - -15.2  -3.53012   CGCCTGCTCCGGAAA        GCGCGCCCGGCC GCCGG GGCCGGGCAAGC        GGGATGGTTGCGCCC  81 41
LK412_RS11100 NONE
LK412_RS11095 2307626 .. 2307674 - -18.2  -2.90075   GCCCGGGGAACGACA CCTGCGGCAAGGGTGCCTGTCCC CGCA GGGACAGGCACCCTAGG-GCACG ACCTCGGCCAGCACC  86 16
LK412_RS11065 2298918 .. 2298946 - -10.1  -3.06915   AGGTAGGCGACCGAA        GCCACCACGCCGC CAT GCGGCGCGCCCGC        GGCCTGAACGTTCTG  60 125
LK412_RS11060 NONE
LK412_RS11055 2297430 .. 2297449 -  -4.2    -3.889   CGCAAGGATAGCAAA            GGC-CGGCG AGC CGCCATACC            CCGGGATGCCCGTAT  57 62
LK412_RS11050 NONE
LK412_RS11045 NONE
LK412_RS11040 NONE
LK412_RS11035 2290984 .. 2291038 - -15.7  -2.71364   GGACTTCGTCAACGA TTGACGGTTGGCACGGTGCCTGTCCC CACG GGGACAGGCACCGCATCC-CCGCCTA CTCGTTCTCCGCCCC  75 23
LK412_RS11025 2289374 .. 2289385 -  -7.2  -4.59773   CTTGAGCCCGAAAAA                GCGG AGCG CCGC                 CATGCTGGATATAGA  79 84
LK412_RS11005 NONE
LK412_RS11000 NONE
LK412_RS10995 NONE
LK412_RS10990 2283271 .. 2283287 -    -3  -2.78679   CGCCGGGACGGAAAG              GAAATG GCGCG CATCTC              AGGCCCCCTCGCCCG  40 24
LK412_RS10985 NONE
        cpaB 2281876 .. 2281890 -  -3.5  -3.01791   AGCTGTTCGTCAATA               GCGCA CTGCC TGCAC               GTCGCCGCCGCGCAC  44 5
LK412_RS10975 NONE
LK412_RS10970 2279063 .. 2279086 - -12.4  -3.16564   TTCGGACGCGATGAA          TTCGCCGCCG CCCG CGGCGCCGAA           TTCCATGGATGGCGG  69 58
LK412_RS10960 NONE
LK412_RS10955 NONE
LK412_RS10950 NONE
LK412_RS10940 NONE
LK412_RS10935 2270903 .. 2270939 -  -4.4  -3.04398   GCGGTTTCGTAAAAC   CCGTGGCCCAACCCG GCCGGTTA CGGATCGG-CCACGC    CATCGGCCGTTTCGG  45 9
LK412_RS10930 2270084 .. 2270099 -  -3.2  -3.83318   CCGGCAATAATACAA              GCGTAG CCGC CTATGC               CCCGCCCCGCCATAC  56 74
LK412_RS10925 NONE
LK412_RS10920 2268713 .. 2268739 - -11.5  -3.65351   CGAGCTGGACGGAAA        TGCCGGC-CCGC GGCC GCGGCGCCGGCG         AACCGGCGCCGGACC  75 105
LK412_RS10915 2268115 .. 2268127 -  -2.6  -3.29471   CGTTCATGATACGAA                GGCC GAAGG GACC                GGGGGCTCGCCCAGC  44 1
LK412_RS10910 2267607 .. 2267626 - -16.4  -3.75629   CAGGCGCAACCGAAA            CGGGCCGC ATGC GCGGCCCG             TTTTTTTTGCCCCGG  88 95
LK412_RS10890 2263302 .. 2263314 -  -7.7  -2.71144   CATCGTGGGCAACGA                GACGT TCG ACGTC                ACGGGCCTGGAGGGC  49 311
LK412_RS10875 2257332 .. 2257357 -  -4.7  -3.06696   TTGCGTTTCAAGACA         TGCAGGACGTGA ACC CCA-GTCCTGCG         CCAGGCGAGCATTGC  45 133
LK412_RS10870 2256288 .. 2256322 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 271
LK412_RS10845 NONE
LK412_RS10840 2250138 .. 2250157 -  -9.2  -2.72344   GCCGATTTCGAAGCA            GGCGTGGC GCAG GCCAGGCC             GCTGTTCATGCGCGC  52 243
LK412_RS10830 2249643 .. 2249661 -  -4.4  -3.66018   GGAGGATGGGAAGAA             TCAGTCGG GCA CCGGCTGG             CTGGCCTGTTCACCC  55 7
LK412_RS10825 NONE
LK412_RS10820 2247538 .. 2247584 -  -7.2  -3.55444   CTCCGATTCCGTAAA GCGACGGAACACGCTCGCCGAT TTCCG ACCGGCAGGCG-GA-CCGCCGC CTGGCTCCCCTTTGT  58 339
LK412_RS10815 2246792 .. 2246826 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 262
LK412_RS10800 2242928 .. 2242961 - -15.9  -2.70932   GCGCCGCTTCAAGGA     CGACGAGGCGGACGC GCCG GCGCCGGCCACGTCG      GCCGCGGCCGCGCGC  75 93
LK412_RS10785 2240294 .. 2240350 -  -7.2  -4.64334   AACGCCGCAACAAAA CCCTGGTTGGCG-GCGGCTGCCCCGCC TTGCGC GG-GGGGCCGCCGCGCGTGGAC-AGGG CCGCACGCGCCTTGC  79 173
LK412_RS10780 NONE
LK412_RS10775 NONE
LK412_RS10770 2237709 .. 2237747 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
LK412_RS10765 2234474 .. 2234484 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 139
         rrf 2234265 .. 2234299 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
LK412_RS10740 2230347 .. 2230369 -  -4.7  -2.70932   GCGCCGCGCCAACGA           GGAGCTGCG CCACC CGCTGCTGC           AGCATCGGCCGTTCA  43 296
LK412_RS10695 2220694 .. 2220733 -  -8.4  -3.60098   AGGCGCTAGCGTAAA  CCCATG-GCCGCGCACGCG CAA CGCGCGGGCGACTCCTGTG  TTTGCCACGGCGCTT  62 170
LK412_RS10690 2218423 .. 2218436 -  -5.9  -3.82824   CACGATCGACAAGAA               CGGCA TCGA CGCCG                TCCTGGCCGACCTGC  63 408
LK412_RS10665 2214155 .. 2214209 - -11.8  -3.84712   CAATTGGAGATGAAA TGATTTGCGACGGCCGACCCCGGCGC ATG GCGCCGGGGTCGGCGGCATCCTAGCT GTGAACTGTCAATAG  79 20
LK412_RS10660 2212619 .. 2212631 -  -4.7  -2.71712   CGCGGCCCGGGAAAG                GGCCG CTC CGGCG                TACGGGGCCGGCGAC  43 145
LK412_RS10655 NONE
LK412_RS10650 2210390 .. 2210409 - -11.4  -4.11692   GAGCGATTGGGAAAA            CGGCCACC CACT GGTGACCG             TCTTCCATCATATCG  82 78
LK412_RS10645 2209965 .. 2209980 -    -6  -2.83112   ATGCAATCGATCATA              CCGCCG CTCG CCGCGG               CATGCCTCAGCGGCC  48 32
LK412_RS10640 2208638 .. 2208665 -  -2.5  -3.08679   GGGGTGTAGCGAATA        GGCATCGCGGC ATTGTA GCCACTGCGCC         CCCCCCTCGCCGCAG  42 87
LK412_RS10635 2207796 .. 2207808 -  -3.3  -3.78793   CATAATTATGAATAA                GGCGA TGG TAGCC                TGCTTTGCGGCGGCC  56 89
LK412_RS10630 NONE
LK412_RS10625 NONE
LK412_RS10620 2204450 .. 2204479 -  -8.5  -2.62983   CGGACGTGTACAGGA       TGGCG-GCCAGGTC GTC GGCCTTGCGCGCCA       CCGTCCTGAAGCGCT  52 485
LK412_RS10610 2202172 .. 2202195 - -13.8    -4.015   CCAGCGATGAAAGAA          GAGCCGCGCC GGCC GGCGCCGCTC           CCCTTTCGTCCCTCA  84 53
        sodC 2201528 .. 2201547 -  -5.6  -3.32343   GGGATATCCCTAGAA            CGGCCGGCC GCG GGACGGC-G            CAACCCCTACTTCAC  51 32
LK412_RS10600 2200382 .. 2200413 - -20.8  -2.71712   GTGTTCGGTGGAAAT      GCCGGCCGGGCGCC GCGC GGCGCCCGGCCGAA       TACGCGATTACTTGA 100 33
LK412_RS10590 2198351 .. 2198394 - -10.9  -3.14344   CATCGCCTTGATCAA GGCGCAGGCGGTGCTGCTGGG CCTG CCCGGCC-C-CGGCCTGCGCC TGTCCGCGCGCAACC  64 257
LK412_RS10580 NONE
LK412_RS10575 NONE
LK412_RS10570 2195170 .. 2195186 -  -2.1  -4.62069   CGCTGAGGCGAAAAA              CGCATGG ATT CCTCACG              GAGGTAAAAGCGCGC  70 266
LK412_RS10565 2193825 .. 2193856 -   -15  -4.26076   CGATGCTCACGAAAA      GGGAACGCGGCGCC GTCG GGCGCCGCGCGCCG       CTTAGGACTGCTGGC  95 27
LK412_RS10560 2190328 .. 2190359 -  -6.5  -3.61398   CGCGTCGCGGAAGAA      CTCGCACCAGCCGA TCTCG TCGGCCGGCGTG-G      CGCCCTGCGGCGCCA  56 227
        pdxJ 2188304 .. 2188322 - -11.6  -2.56271   TCGTGATGATAATAC             GCCGGGCG CCC CGCCCTGC             TTCAGGCGTGGCCGC  61 27
        acpS NONE
        nagZ NONE
        uvrC NONE
        pgsA 2184182 .. 2184192 -  -8.2  -3.85698   CGCGGTCTCCAGAAA                 GCGG CGG CCGC                 GAACCAGCCCGCCAC  68 111
        aceA 2180310 .. 2180331 - -11.5  -6.06723   GGCGGCAAAAAAAAA           GGGGGCGTC CGAG GACGCCCCA            AATCCACCCTGCAAC 100 85
LK412_RS10510 2178911 .. 2178927 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
LK412_RS10485 NONE
LK412_RS10480 NONE
LK412_RS10475 NONE
LK412_RS10470 2171802 .. 2171815 -  -2.4  -4.25658   AGGCGATGAAAATAA               TCGT TGTCAT ACGA                GGCGTTCCCGTCGTG  62 43
LK412_RS10465 NONE
LK412_RS10460 2170241 .. 2170256 -  -6.1  -3.20382   TTCCAGATCTACGAA              GCGCT GGCCGA AGCGC               AGGAGTCGATCGACG  50 100
LK412_RS10430 2162733 .. 2162759 -  -2.2  -3.66999   ACTGACGCAGGGAAA         CCGTTTCGATAG CAT CCATCATAACGT         CGCATCATGCAGGAA  51 17
LK412_RS10425 NONE
LK412_RS10420 2160700 .. 2160710 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS10415 2159528 .. 2159538 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 183
LK412_RS10410 2158089 .. 2158107 -  -6.8  -3.28712   TCCTGCGGTTTATAA             GATGTATC TAT AATACATC             TTATGGCTTAGGCAT  54 442
LK412_RS10400 NONE
LK412_RS10395 NONE
LK412_RS10390 2155948 .. 2155964 -  -2.1  -3.08046   TTCTCACTGCAAAAG              TTCGGCC AAC GGCGGAT              TTTCGCAGATTTGGG  42 60
         xth NONE
LK412_RS10380 2153532 .. 2153543 -  -2.2  -2.90571   AAGTCCGCAACTATA                CACGG ATT CCG-G                CCGTTTTGGTAGCGG  40 82
LK412_RS10375 2153393 .. 2153420 - -12.8  -5.63517   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT 100 42
LK412_RS10340 2147105 .. 2147132 - -18.4  -2.50443   GGAGAGGGCAGGAAG        CGGGCGCGCGCA GGCG TGCGCGCGCCTG         GCCGGGAGGCGTCTG  87 406
        gorA 2142874 .. 2142892 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 249
LK412_RS10290 2137385 .. 2137395 -  -2.4  -2.71461   AGAATAGGAAACCGA                 GGCC CGT GGCG                 GCAATGCCGATTGCT  38 101
LK412_RS10285 NONE
LK412_RS10280 NONE
LK412_RS10275 NONE
LK412_RS10270 2132125 .. 2132171 - -17.2  -3.56821   AGGAGATCCTGGAAA GCCGGCGCCAGGCCGGCGAAG GGGACG CCGCGCCGGCC-GGCGGCGAC GGGCCTGCGCCGCTG  93 418
LK412_RS10255 NONE
LK412_RS10250 NONE
LK412_RS10245 2128547 .. 2128581 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 213
LK412_RS10235 2127201 .. 2127211 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS10230 2126137 .. 2126147 -  -2.4  -2.71712   TCTCGCGGGCGAAAG                 CGGG CCC CCAG                 TATCCCGGCAAGCGG  38 75
LK412_RS10225 NONE
LK412_RS10220 2123089 .. 2123120 -  -6.4  -3.23216   CCGCACGAGCACGAA      CGCACCGGCCACCAG GGG CCCGAGGC-GGCGCG      CGTCAATCGCGTCTG  50 480
LK412_RS10210 2121865 .. 2121922 - -21.1  -2.83403   GCGCCGCCAGGAAAG CCGCCATCGCCCGGGCCGCCGCCCGGC ATGG GCCGGGCGGCGGTTCGAAGGACGAAGG ATGTTGCTATTAAAC 100 102
LK412_RS10205 2121064 .. 2121090 -   -10   -3.5393   ATGATCCGGCGCAAA         TGGCCGCTCAAC TGA GCAGGGCGGCCA         CCAGATCGCGGTTGG  67 6
LK412_RS10200 2118822 .. 2118842 -  -5.3  -3.57144   GCCTGGACGCGCAAA            GTATCCGCT TCG AGCGGCTGC            TGCCCGGGCCCATCG  54 514
LK412_RS10185 2117380 .. 2117431 - -11.6  -3.14931   GGGATGGCGCAGCAA CTGGCCGGCGCCGAG-CGCATCGTCG ACGC CG-CGGTGCGGCGCG-CGCCGGCC-G ACTGAGCCGGGCGCG  66 41
LK412_RS10175 2116508 .. 2116539 - -24.6  -2.82759   AAGATACCTATGACA      CAGGAGCCTGTCCC GACG GGGACAGGCTCCTG       CCGAATCCTTCCGTA 100 121
LK412_RS10165 2114693 .. 2114711 - -10.2  -3.01712   TCCTGCCGCTGAACA             GCCGCGAG CGC CTGGCGGC             GATGCGCTACGACCT  59 358
LK412_RS10155 2112708 .. 2112723 - -10.4  -2.78384   GGGTGGCCGACTATA              TCGCGC GGCT GCGCGA               CGACCCCGAGCTGGC  56 498
LK412_RS10140 2110135 .. 2110157 - -11.3  -2.70932   GGCGCTGTCGAATTA           CCAGCAGAC CAAGT GCCTGCTGG           TGAGCTACAGCGCCA  59 148
LK412_RS10130 2106349 .. 2106383 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
LK412_RS10120 NONE
LK412_RS10090 2099429 .. 2099463 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS10080 2097538 .. 2097565 -  -5.5  -3.66058   ACAGCAGATAGAGAA        TGCTCATGGCGC GGGTT GCGCCACG-GCG        GCGGCGGGCGCGGCG  57 1
        ccoS 2096995 .. 2097018 -  -7.4  -3.28924   CAGCTTGTCGCAGAA          CAGCCGCGCCT GAC AGGTGCG-CTG          CACCACGTAATACGA  56 408
        ccoO NONE
LK412_RS10060 NONE
        ccoP NONE
        ccoG NONE
LK412_RS10045 NONE
LK412_RS10040 2091923 .. 2091940 -  -3.3   -3.6761   GCGTCGCAACAAACA             CGGCGCT TCAG AACGGCG              TCTCGTCCTGGCCGC  53 15
LK412_RS10035 NONE
LK412_RS10030 NONE
LK412_RS10025 NONE
LK412_RS10020 2088300 .. 2088327 -  -6.2  -3.01712   CGCCGGGCCCGAACA        GGGCGTCGCGCTG GCG CAGCT-GACGGCC        GCCACCATCCGGGCC  48 476
LK412_RS10010 2086167 .. 2086191 -  -4.9  -3.77087   GAGTGAACATGGAAA          TCCGCCCCG TACGCAC CGAGGCCGA          TTACAAGTCGGCTCT  58 361
LK412_RS10000 2085095 .. 2085112 -  -8.3  -3.67954   CAAATAGAGGCCAAA             GCGCTGC GCAA GCTGCGC              CACCCCAGCCGCGCC  67 483
LK412_RS09985 2082097 .. 2082114 -  -8.3  -3.63968   GCCGAAATGGCGAAA             CTGGCCG AAAG CGGCCTG              GCGACCGACGAGGCG  63 129
LK412_RS09890 2060285 .. 2060303 - -17.4  -3.15544   TGCCATGGGCAGGAA             CCCCCGGC CGC GCCGGGGG             GCCCTTGCGTTCAGA  84 36
LK412_RS09875 2057306 .. 2057316 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS09870 NONE
LK412_RS09865 NONE
LK412_RS09860 2054520 .. 2054542 - -11.2  -3.57144   CGGGCGAGCGCGAAA           GCTAGGGCGC GCG GCGCGCCAGC           GCGGCCAGCGCGTCG  70 4
LK412_RS09840 2051770 .. 2051789 - -16.4  -3.90112   CTGCCGGCAAGCAAA            CGGCCCGC GCAA GCGGGCCG             TTTGTCTTGGCGCGA  93 53
LK412_RS09755 2030919 .. 2030937 - -17.4  -3.10522   AGGCGACGCAACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGCGTAC  84 135
LK412_RS09700 2019070 .. 2019080 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 86
LK412_RS09695 2017697 .. 2017712 -    -6  -2.50699   GCTCAAGGAAGATAT              GGTGGC GTTT GCCGCC               GAGCATTTCGACCTG  44 379
LK412_RS09635 2007161 .. 2007189 - -19.7  -4.15508   AAGCAAGCCGCAAAA        GAAAAGCGGAGCC ATG GGCTCCGCTTCTC        GATGCCGGCCGTGCC 100 45
        lexA 2006366 .. 2006380 - -12.8  -4.74103   GCCCCAAGGCAAAAA               GCCCCC TCG GGGGGC               AGCAAGCCCGCGTAG 100 75
LK412_RS09545 1991647 .. 1991671 - -22.9  -4.11692   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTCGGCTATC 100 91
LK412_RS09520 1984794 .. 1984819 - -14.7  -5.14563   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 45
LK412_RS09485 1980254 .. 1980290 -   -21  -4.59773   CCCCATCCGTAAAAA    GAACTGCCGTCATCCC TTGTG GGGATGGCGGCAGTTC    GACTGCGCACGCGAA 100 70
        dapD NONE
        dapE NONE
        prmB 1975895 .. 1975905 -  -4.6  -2.64912   GGGTCAAGCCAGAAG                 CGCG TAT CACG                 TGTTCAATTGTTCGC  42 21
LK412_RS09455 1973920 .. 1973930 -  -2.4  -3.58365   GAGTATAGGAGATAA                 TGCG TCT CGCT                 GGTTTTACGCTGCGC  48 74
LK412_RS09450 1970530 .. 1970544 -  -7.1  -3.53012   CCCGGGCCCGGGAAA               GGCTG TATCT CAGCC               TGGCGCAAAGCCGCA  58 488
LK412_RS09435 1966613 .. 1966647 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS09415 NONE
        ileS NONE
        lspA 1958245 .. 1958260 -    -6  -4.08945   AGCATGGCGGGAAAA              GGGCGC GGCG GCGCCG               CCTGTCAAAGTGGTG  66 104
       coaBC 1956808 .. 1956860 -  -9.2  -3.53174   AGAGGCGGAGAAACA GCAACTG-GA-AGCCCGGCC-GCGC TTTCTG GCGCTGGCCTGGCTGTCGCTGTCGC ATTCGCTGATCGAGG  61 191
LK412_RS09390 1955251 .. 1955285 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS09365 1950316 .. 1950332 -  -2.1  -3.61398   TTGCGCGGTGAAGAA              GACATCC GCC GGCTGGC              CGGCCATACCTTGCT  50 223
        cphA 1944805 .. 1944825 - -15.4  -3.61398   CCTGTCGTCGAAGAA            GCGCCGCC GTTCG GGCGGCGC            GGCAAGAGGGGCGAA  83 50
        cphA 1942130 .. 1942147 - -14.1  -5.28176   CGCAGGGAGAAAAAA             GGCCGGC TTGC GCCGGCC              CAAGTTACATTTGAG 100 84
LK412_RS09340 NONE
LK412_RS09335 NONE
LK412_RS09330 1941082 .. 1941103 - -15.9  -5.86965   AGGCACCAAAAAAAA           GCCTTCGGG CGAA CCCGAAGGC            GGTACACGTACGGCG 100 73
LK412_RS09315 1938600 .. 1938618 -  -5.9  -3.16564   CGCCGAGGCCATCAA             GGGCGAC GCTCA GTCGGCC             GCAGGCTGAGCCAGC  51 16
        ugpQ 1935669 .. 1935695 -  -5.1   -2.8352   CGGTAACTGAACAAG        GCGGCTCCG-CGT CAG ACGGCGG-GCCGG        ATGGTGGCCAGCTCG  46 10
        rlmJ 1934380 .. 1934422 -  -8.8  -3.28924   CATCGCCGGCGAGAA CGCCGCGCGCTATCCGGACG TCG CGCCGGGCCTGCGCCGGGCG GCGCTGGGCGTGGTG  59 407
        cueR 1931541 .. 1931563 -  -8.3  -3.29144   CCAGGCGCGGCAGAA           GGCGCGCGA GGAGG CCGAGCGCC           TTGCCGAGGCGGCCG  58 72
        plsY 1924184 .. 1924212 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGCGCGGTGG  56 162
LK412_RS09235 1922661 .. 1922688 -  -9.8  -2.52464   GGCGGCGGCAACGCA        GGCCGCCATC GTCGAGGT GCTGGCGGCC         AAGGCCATCCGCGCC  55 402
LK412_RS09225 1920446 .. 1920476 - -18.3  -3.58343   TTGACGACCTCGAAA       GCAGGCAGGCCGC GCGAG GCGGCCTGCTTGC       GGGGCGAGGCGCGCG  90 49
LK412_RS09215 1918621 .. 1918636 -  -4.6  -3.64703   GCGTGCGCAGCGAAA              CCTTCG ACGC CGACGG               CGCGCAACTGGAATT  54 146
LK412_RS09175 1910194 .. 1910204 -  -8.2  -3.21747   GGATGGGAGGAGTAA                 CGCG CTG CGCG                 GGCGCGTCGCGACGC  58 106
LK412_RS09170 NONE
LK412_RS09165 1907609 .. 1907623 -  -2.7  -3.75169   GACGACTCCATGAAA               CGGGG ACCGG CCACG               CGGGGCAGGGATTCT  53 39
LK412_RS09160 1906721 .. 1906755 - -14.9  -3.63515   GCCCATCGGCAAGAA     GGTGGGCCTGGCCAC CGAAC GCGGCATGGCCCACC     TCGTCATCGACGAGC  83 64
LK412_RS09085 1892935 .. 1892956 -  -3.6  -3.53012   CCCTGGCCGCCGAAA           CCCGCGAC CAGGGC ATCGCGGC            CAACGCGGTGCTGCC  49 205
LK412_RS09065 1888976 .. 1888996 - -12.5  -3.30441   TACCAGGCTGGAGAA            GGCGGCCTC GTA GAGGCCGGC            GCCCATCGCCACGCC  71 362
        arsH 1886742 .. 1886752 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 255
LK412_RS09040 1885276 .. 1885310 - -17.1  -2.66316   CGTCCTACGACATGA    CGCCGCC-GGCCGCCA AGGA CGGCGGCCAGGAGGCG     CCGTGAGCGACGCCC  80 453
LK412_RS09020 1881871 .. 1881888 -  -4.8  -3.16742   CTCAAGCCGGAGTAA             GGCCGCC GCTCA GGCG-CC             GGGAAACCGCATGGG  47 17
LK412_RS09000 1878153 .. 1878164 -  -5.8  -2.62184   TGCCCGCTCAGACGA                TGCG CGTG CGCA                 AGGTGCCGATCTGCG  44 6
LK412_RS08995 NONE
LK412_RS08990 NONE
LK412_RS08985 NONE
LK412_RS08980 1873840 .. 1873851 -  -7.2  -3.14132   CCTGGTGCGCACCAA                CCCG CGCA CGGG                 CCGGCGCTCGCTCTA  53 253
LK412_RS08970 1872263 .. 1872281 - -10.4  -3.68073   CAGTTCATGGAAGAA             TATACGTC ATT GACGTATA             TTTCAATCGCCAGCA  70 109
LK412_RS08965 NONE
        nadS 1871706 .. 1871731 - -13.3  -2.79831   GCAACCGCCAGCACA         CCGCCAGCG TGGTGCTG CGCTGGCGG          TTCTGAATCGCAGCT  67 45
LK412_RS08950 NONE
LK412_RS08945 NONE
LK412_RS08935 1863534 .. 1863582 -  -7.3  -2.84192   GACATGAGCAGTACA CCCTTGCGGGCCGGGCGCGCGGCG GCGC CGCCGCGCG-CCGAAGCGC--GGC CGCTGGCCGGACTGT  50 439
LK412_RS08880 1851924 .. 1851937 -  -9.5   -2.5092   GAATATTTTATGAAT               GCGCG CGGC CGCGC                GGCGCGGCCTGGAAG  54 61
LK412_RS08875 NONE
LK412_RS08870 1849881 .. 1849906 -  -9.7  -3.24232   CTCCCTTGAAAGACA         CGCTCCTGCCGA TTC TAGGCAGG-GCG         GCGGGCGGATCGGCC  61 120
LK412_RS08865 1849029 .. 1849039 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS08860 1847998 .. 1848009 -  -5.8  -3.01712   GGCTCGCGCCGAAGA                TCGC GCCG GCGA                 CCGAGCCGACGCCGC  47 41
LK412_RS08855 NONE
LK412_RS08850 1846126 .. 1846136 -  -3.2  -4.09685   TCGTACGGGCCAAAA                 CACC TCC GATG                 ACGCGAGTGCCGCGA  59 252
LK412_RS08845 1845197 .. 1845218 -  -8.7  -3.30771   CGAGAGCGTGCAGAA           CGCCATCGAC CAG GCCGA-GGCG           GTGGCCGACGATATG  59 328
LK412_RS08835 1842907 .. 1842925 - -12.4  -3.57144   CGCTGCATTGGGAAA             GCGTCGAC GCG GCCGACGC             CGCGGCGGTGCTGGA  74 344
LK412_RS08765 1826652 .. 1826668 -  -3.8  -3.14132   TGTGCGCTGCAGCAA              GAATTT CATGC AAATTC              TTTGATTTACTAATA  45 289
LK412_RS08760 NONE
LK412_RS08755 1823568 .. 1823603 -    -9  -4.70266   AACAGCAGGGAAAAA   GA-GGC-CCCGCGCCG TGCCCG CCGCGCGGGCGCCGTC    GTGCTGGACGGGCTT  86 94
LK412_RS08750 1821247 .. 1821268 - -15.9  -4.77165   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 306
LK412_RS08735 1817804 .. 1817822 - -10.2  -2.62184   CCTCGCTGGAGACCA             TCCGCCAC ATG GTGGCGGC             CGGGATCGGGGTGAC  55 278
LK412_RS08700 1808806 .. 1808864 - -12.3  -4.06419   TTCGTGGACAAATAA GGCCGTGCGCCGCCA-GGAAAAGCCGCC TTCG GGCGGTTTTTCTTTGGCCGCGCGCCGGC GCCGTTCATGCGTCG  83 31
LK412_RS08690 1806549 .. 1806576 - -15.6  -4.59773   TGCTACGGGGAAAAA        TGCAAAGCGGCC GGAT GGCCGCTTTGCC         GACAAACAAGGCAGT 100 107
LK412_RS08685 NONE
LK412_RS08680 1804020 .. 1804030 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS08675 1802697 .. 1802708 -  -2.2  -3.21099   CCGCCCGAGCACGAA                GAGCG CGC CGC-C                TACCTGGTCGAGGGG  43 333
LK412_RS08660 1799889 .. 1799942 - -19.6  -3.01712   CCGGGCGGTCGAACA CCAGCAGGCGGCGGCC-CGGCAGGCCG AAC CGG-CTGCCGCGGCTGCCG-CGGCCGG GACGGCGCCGGCCCC  87 294
LK412_RS08625 1791016 .. 1791044 - -11.6  -2.65298   GCCACGCAGGAGAAT        GCCGCCATGGCC GAGCA GACCGCGGCGGC        GGCGGCCTCGCTGGA  61 105
LK412_RS08610 1786845 .. 1786880 - -20.4  -2.84602   GGCACTGCAGTAAAC    CCGCGTGCCTGTCCCC GCAC GGGGACTGGCACGCGC     TGAATCCGGGGTGCC 100 154
LK412_RS08600 1784819 .. 1784834 -  -6.2  -3.07355   TTGAAACAACAACGA              CTGAAA AGGA TTTCAG               GGGCACCGGTCTATG  49 230
LK412_RS08595 NONE
LK412_RS19895 NONE
LK412_RS08590 1783959 .. 1783971 -  -9.1  -3.28712   GTGCGTGTCCGACAA                GCCGT TGC ACGGC                GAGCTCAAATTGCCC  59 243
LK412_RS08580 1781299 .. 1781320 -  -7.9  -3.61398   TGTGCTGTTCAACAA           TGCCGGGCGC GGC GCGCC-GGCC           GTGCCCATCGAGGAG  60 501
LK412_RS08570 NONE
LK412_RS08565 1779126 .. 1779136 -  -8.2  -4.09685   CCCGAGGGCGGAAAA                 GCCC CCG GGGC                 CAGCAAGCCCTCGCG  72 45
         gmk NONE
        rpoZ NONE
LK412_RS08550 1775530 .. 1775556 - -13.6  -3.14132   TCGGGTGGCCAGCAA         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCCATCAAGCCCAAG  72 308
        dapA NONE
        bamC 1769488 .. 1769511 - -18.2  -5.78622   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 66
LK412_RS08495 1763904 .. 1763932 - -20.3  -3.61398   CTGCGTGTGCAACAA        CTGCGCAACGCGC GCC GCGCGCCGCGCAG        GCCGGCATCAGTCGT 100 33
LK412_RS08485 NONE
LK412_RS08480 NONE
LK412_RS08475 1759137 .. 1759151 -  -4.2  -3.14931   GCGATTCGGTATCAA               TCCATG CAG CATGGC               CAAACACTCCAAACG  45 52
LK412_RS08470 NONE
LK412_RS08465 1756924 .. 1756934 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS08460 1755437 .. 1755462 -  -8.2  -3.40403   GCCGCTGGACGACAA         GGCGGCCGCCG ATGCG CTGCGGC-GCC         TGCGCGGCCTGGACG  61 483
LK412_RS08450 1754330 .. 1754361 - -14.6  -3.02829   CAGAGGCGGGTAAGA      TCGAATGGCTGTAT GGGC ATACAGCCATTCGC       GCGCCTGGGGCGCAG  74 50
LK412_RS08445 NONE
LK412_RS08440 1752649 .. 1752683 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 264
LK412_RS08390 1739990 .. 1740022 -   -20  -2.64616   CGGGGACGGAGACGA     CGGTGTGCCTGTCCC AGCG GGGACAGGCAC-CCG      CACGGGCAGGCGCCT  95 77
        pbpG 1738386 .. 1738420 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 201
LK412_RS08350 1732114 .. 1732155 -  -2.1  -4.01411   TACGAAAAACTCAAA TCCGGATCGTGGATATGCGG GCG CGGCATCGCCGCG-TCCGCA CGCTTACTGTGCCTT  56 29
LK412_RS08345 1730682 .. 1730704 -  -9.8  -3.28712   CTGGGTGGTGGACAA           CCAGCACGGC GAA ACCGTGCTCG           AACTCGACGCCACCA  63 207
LK412_RS08260 1716987 .. 1717017 - -19.6  -3.14344   CAGGTGGTGCAGTAA       GGCGGCGACCGGCG CGG CGCCCGGCGCCGCC       CGCCCGCATGGAAAA 100 79
LK412_RS08245 1713783 .. 1713826 -  -9.4   -3.0127   CGAGGGAATTACAGA TCGCCTGAGCGAGGCAGCGG CGCT CCCCTGCCTGGGTGAGGCGC GCGTCCCCGGTTTCA  57 38
LK412_RS08240 1712380 .. 1712428 -  -3.5  -3.39449   TCCGAGCAACATGAA GGGCTC-CTTCGCGCGCGCCGC GGCAAG GCCGCGCGCGCGCCGTGCGTCG TGCGCCTCAGCTGGT  49 32
LK412_RS08235 NONE
LK412_RS08230 NONE
LK412_RS08225 1710234 .. 1710254 -  -3.3  -3.35046   GCAGTCTCGGAAAGA            CGGATAT TCCCAAT ATACCCG            TTGCCCGGCGGTCCG  46 59
LK412_RS08220 1709390 .. 1709424 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 411
LK412_RS08140 NONE
LK412_RS08135 1694086 .. 1694096 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  57 383
LK412_RS08125 1692968 .. 1693002 - -12.9  -2.61582   CAGGGCATTCAGAAG    CG-CGGACCTGGCCTT GTAC AAGGCCAAGGCCGACG     GGCGCAATCGTGTCC  62 105
LK412_RS08110 1689072 .. 1689085 -  -2.3  -2.71731   TGGATCGTCGAACTA               TGGCC GCGC GGCGA                CGCCGTGTATGAGCC  39 171
LK412_RS08080 1683666 .. 1683685 - -13.6   -5.5112   GGGACCAAGAAAAAA            GCCCCTGA CGGA TCAGGGGC             TTGCAATGTCTGGCG 100 36
        alcA NONE
        alcB NONE
        alcC NONE
        alcD NONE
        alcE NONE
        alcR 1676286 .. 1676304 - -13.8  -2.61264   GGCTCCATGGACAAG             GCCGCCCG GAG CGGGCAGC             GGCCTTCCATGATGA  69 111
         bcr 1675032 .. 1675049 -  -7.7  -4.18197   AGTGCGTATGGAAAA             CGCCGAA GATG TTCAGCG              TGCCTGGACCTTGGC  74 20
        fauA 1672622 .. 1672647 -  -4.7  -5.29846   AACCCGAAAGAAAAA         CCCCGCAGA CGCTCGGT TCTACAGGG          GTTTCCTGGGTATTT  93 107
LK412_RS08035 1671704 .. 1671715 -  -3.6  -3.12668   CATCTGGAGACCCAA                GCGC ATTT ACGC                 CGGCGTCGGCGCCTG  45 85
LK412_RS08025 1670425 .. 1670462 -  -9.8  -3.05384   TTTTTCTGGATCGAA   CCGCCGGTCA-TCAGCC AGGAA GGCTGACCGGCCCGCGG   GCCGTTATGCGCCAG  60 30
LK412_RS08015 1669516 .. 1669553 - -10.5  -2.59742   CGCAATGGCGACAAT   CCGCAACCGCCCGCAGTC CGG GAC-GCCGGCGTTTGCTG   CGTTGCGGCAAATTT  57 153
LK412_RS08010 NONE
LK412_RS08005 1668405 .. 1668422 - -11.3   -4.0616   CACGTGAACCAGAAA             CGGAACC CGCG GGTTCCG              TTTTTCATTTCGGCG  81 105
        trxB NONE
LK412_RS07975 NONE
LK412_RS07970 1660475 .. 1660485 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 77
LK412_RS07965 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 1651758 .. 1651778 -  -6.7   -2.8655   GGCACGCATACTATA            CGCGCGCCG CTT CAGCGCAGG            CGGTCCAGCGCCAGG  50 16
        kdpE 1648040 .. 1648074 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 203
LK412_RS07900 1642551 .. 1642579 -  -5.8  -3.33261   GCTCAAGGCCTACAA        GCGTGGCGCCGC GGGCA GCGCGGCCACGG        CCAACGTGCGCAAGA  52 186
LK412_RS07885 1640778 .. 1640791 -  -9.5  -2.75183   AGTGGCAGTCAATGA               GGCGC GACA GCGCC                GAGGCATGATAAGGA  55 87
LK412_RS07880 NONE
LK412_RS07875 1638531 .. 1638556 -  -7.5  -3.16881   GATCGACGCCACCAA         CGCCG-GCAGCG TCG CGCTGCACCGCA         AGCTGGGGTTCGTGC  53 148
LK412_RS07860 1634537 .. 1634566 - -22.3  -2.62616   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 97
LK412_RS07820 NONE
        recN 1624502 .. 1624542 -  -2.3  -4.75776   AAGCGAACTGAAAAA  CATGGGCCTGAAGGCGACG TTT CCCCGCCTGAAGATCCTTG  ACATTTTTCGTAAAT  76 453
LK412_RS07805 NONE
        dapB 1622717 .. 1622729 -  -4.7  -3.29144   CGATGGCCGCTACAA                GCTGG CCG CCGGC                TGGCTGATCGATCAA  49 263
LK412_RS07790 1621584 .. 1621605 - -14.5  -5.63236   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 37
LK412_RS07745 1610998 .. 1611013 -  -3.2  -3.40403   CCCTTCGCAGGACAA              GGCTTC GTGG GAAGTC               GAGAATAGCGTCGCG  48 53
LK412_RS07740 NONE
LK412_RS07735 1608489 .. 1608504 -    -4  -3.90588   TATGGGGTAATGAAA              CTTCTGG AAT CC-GAAG              GGGTATCGCTGCGCG  58 426
LK412_RS07615 1583348 .. 1583380 -  -8.9  -4.07568   GCGCTTTGGCGAAAA      GCCCGCCGACCGCGC CGC GTACGCGCGGCAGGC      CCGCTTCCTGGCGGG  72 179
LK412_RS07600 1580740 .. 1580790 -  -7.2   -4.0162   GGGCCACAGGAGAAA CAGCGGCGCCAGCATCCAGTCGAG GAT CTCGCCCAGCAGCGAGCGCTGCGG CGGCGCGAAACTCGG  66 105
LK412_RS07595 1579345 .. 1579360 -    -4  -3.71917   ATCTTAAATTTGAAA              CAATAG GTAA CTATCG               CGCGTACCAGCCCGG  54 61
LK412_RS07590 1577484 .. 1577512 - -10.9  -4.60041   AGGGAGCTTGAAAAA        GCCGGATTGGCGC AGC GGTCCAACCCGGC        GGGGGATGGTTATCA 100 38
LK412_RS07545 1568683 .. 1568696 -  -9.5  -2.70932   CTTCTTGTGCAATCA               GGCCC GCGC GGGCC                TAGGAGAGGGCTTCG  55 25
LK412_RS07540 1567132 .. 1567154 - -19.2  -5.53288   CGCAAGGCAAAAAAA           GGCCCGACAC ATC GTGTCGGGCC           CGTACGGGGCACGCA 100 243
LK412_RS07530 1565417 .. 1565442 -  -6.7  -4.68724   TGATCGAACAGAAAA         GCACG-CTGGCC GAG GGCCTGGCGGGC         GCGGACGTCATTTAC  82 434
LK412_RS07505 1562347 .. 1562394 - -21.2  -4.15788   AACGTGCTCAAGAAA GGGGCTGAGCAAGGCGGCCGGC AGGC GCCCGCCGGCATGCTCAGCCGC ACTGGCGCTGGATCG 100 18
LK412_RS07485 1559821 .. 1559879 -  -2.2  -4.33153   GCCAAGATCAACAAA CTGGAGCTGTAG-TCCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGCTTCCTCGGC-CC-G TGCGCGCGTGGACAG  65 78
LK412_RS07475 1557855 .. 1557865 -  -6.8  -3.03159   CGAACGCGCCCAAGA                 CGCT GCG AGCG                 GTCATTGATTGGGCT  51 121
         dut 1550416 .. 1550450 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS07420 1548054 .. 1548066 -  -3.4   -4.2349   CGCGCAGATCGAAAA                TTCC TCGCT GGAA                CAAGGACTTGTCCAG  63 69
LK412_RS07410 1546629 .. 1546663 -  -2.1     -3.94   GCAAGCCGTAAACAA    CGGGACGTCCTACGCCA AGC TGGCAT-GGACG-CTAG    GTGTGAACTGTCAAT  56 22
LK412_RS07385 1543076 .. 1543110 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS07375 1541859 .. 1541893 - -20.7  -2.71681   CAATGTGGCCAAGGA    GGCGCGGCGCCTGCCG CGCT CGGCCGGCGCCG-GCC     TCGACGCCCTGGTGG  95 54
LK412_RS07315 NONE
LK412_RS07280 1522345 .. 1522392 -  -8.4  -2.55544   TCATCACGGAAGTGA CCATCGGCTTCAACTATGCGCTG GGC CAGGTCAC-GGTGACGCCGATGG CGCTGCTGATGACCT  51 224
        sulP 1516648 .. 1516663 -  -3.9  -3.54424   GGTGAGCGCCGGAAA              CAGCC TGACCG GGCCG               GGGCCGCTCGCCAGC  51 379
LK412_RS07205 1505142 .. 1505155 -  -4.5  -3.54459   CCAAGTCGTCGCAAA               GCC-GG AAT CCTGGC               GACGGCCTGCCACCG  52 57
LK412_RS07180 1499112 .. 1499133 -  -2.9  -2.65264   CGACCACGCACAGCA           GCATGCC-GT CGT ACTGGCTCGC           CGCCACCTACCGCCT  39 47
LK412_RS07165 1495205 .. 1495239 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 380
LK412_RS07135 1488269 .. 1488286 -  -4.1  -4.31943   GGTACAGAAAAAAGA             TGAAGCG TCCC CGGTTCA              TGGCGGGCGGCGGGA  68 42
LK412_RS07130 1487467 .. 1487490 - -16.7   -3.0806   GCGAAATCCGCAAGA          GGCGGCGCG CCGATC CGCGCCGCC           GGCGCGCGGGCCCGG  81 48
LK412_RS07125 1486170 .. 1486180 -  -2.4   -4.4078   GCTGGCCAACGAAAA                 GCCC CAG GGCC                 AGACCATCGCGTATG  68 83
LK412_RS07090 1479279 .. 1479302 -  -2.2  -4.07568   TTCGGGGCGGGAAAA          GGGGCTGGGC AGGC GCTCAGGCCG           CGGCGGCGCCTGCCG  58 18
LK412_RS07085 NONE
LK412_RS07080 1476561 .. 1476586 - -13.3  -2.57132   GGCGCCCGGGATAAT         CGATACGCCGC TGAC GCGGCACATCG          TGCAGGATCGCCAGG  66 269
LK412_RS07050 NONE
LK412_RS07045 1470159 .. 1470196 -  -2.5  -4.58395   CGCACGCTGGAAAAA   GCTGATCGACGAGCGCGG GAT CCGCGCGAATTGA-CGGC   CGCGGCCTCGTGCCG  70 112
LK412_RS07030 1466977 .. 1467019 -  -3.9  -3.84406   CCGCTATGACAACAA CGATCCGCGCCCCTGGCTGG CCGG CCAGGCAGGCTGGCGGG-CG CGCGCTAATTCGGCC  58 339
        queE 1464899 .. 1464921 -  -4.8  -3.64703   GGCGGGTGACGGAAA           TCATCGCG CATCTCC CGCGATGG           GACGGACAGTCATGG  55 35
        queD 1464194 .. 1464218 -  -7.8  -3.31792   GTACGACGCCCACAA         CATCCCGGCGC TCAA GCGCCTGG-TG          GGGCAGGGCGCCAAG  55 266
LK412_RS06990 NONE
LK412_RS06985 1460938 .. 1460955 - -11.3   -4.1822   GCCGAGCCGAAGAAA             GTACCGC CCAG GCGGTAC              ACCGCCTTGGAGCGC  89 192
LK412_RS06975 1458602 .. 1458629 -  -5.5  -2.53263   GCGATGCGCAATTGA        TCGGCG-CCGAC CTGGT GTCGACCGCCGG        GCAGGGCCGCGTGCA  42 428
LK412_RS06960 NONE
LK412_RS06955 NONE
LK412_RS06950 1443694 .. 1443720 - -17.3  -4.91852   GGGAGGAAAAAGAAA         CGGACGCCAGC TTTTG GCCGGCGTCCG         TTGGGTTGGAGGGTT 100 95
LK412_RS06945 1442462 .. 1442476 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
        fimX 1440644 .. 1440690 - -12.1  -3.35679   GCGCGTCATCGACAA GCGGCCG-CGCTGATCGCGGCG GGTT CGCAGGGCGCAACGCCGGCCGC CATGGCCGGCGTTGC  73 45
        paaX 1429928 .. 1429953 -  -4.6  -3.62597   CGGACCGGGCAACAA         TGGCGGCGAC GCGCTG GTGGCGGCCA          CGCTGCTGCAGGCGC  54 497
LK412_RS06865 NONE
        rsgA 1426924 .. 1426948 -  -4.3  -3.78419   GGAGGAAAGATACAA         GGCACC--CCG GGAGT CGGCAGGTGCC         TGTCCTCGTGGGGAC  58 56
LK412_RS06835 1420404 .. 1420456 -  -7.4  -3.36054   GAAAGCCATAGAACA GGTCGGACGGCAGGTGCAGGCC CTGCGGGTC GGCCTGCGCCAGCAGGCCGCAC GCGGTGGTCTTGCCC  59 151
LK412_RS06830 1419601 .. 1419613 -  -4.7  -3.85698   CTGGTCGGCGAGAAA                CTGGC CGC GCCCG                ACGCCCTGGGCAACC  58 506
LK412_RS06815 1416592 .. 1416619 - -11.2  -3.77119   CATCAACGAATACAA        GCGGCGC-CAGGC CCC GCCCGGGCCCCGC        ATCACGCCGCGCGCG  74 501
        argH 1412099 .. 1412116 -  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 49
LK412_RS06780 1409197 .. 1409207 -  -8.2  -2.80622   AGATAGTCGATCATA                 GCGC GGC GCGC                 GGCCGGAAATCGCGG  52 10
        moaA 1407727 .. 1407737 -  -4.6  -3.05384   CCGCTGCGCACCGAA                 CGGC CAC GCCA                 GGACAGCCGCGAGGA  46 372
LK412_RS06745 NONE
LK412_RS06740 1400497 .. 1400515 - -13.8  -3.05463   AGCCCGCCGACTGAA             CGGCGGCG CTA CGCCGCCA             GGCCGTGCTGGCCGA  72 15
LK412_RS06730 1399266 .. 1399296 - -11.7  -4.07568   CCGCTTGCGGCAAAA       CGGGCCGCGGGCC TCGAT GGCCCGCGGCATA       CAGCAACTACGTAAG  82 43
LK412_RS06725 1397769 .. 1397804 - -13.2  -3.00298   CGTGGTAACTACATA    CCCGGGAGCCTGTCCC AGCG GGGACAGGCTCCCTTT     GCCGCGGCAGTCGCT  70 57
LK412_RS06710 NONE
LK412_RS06705 1394138 .. 1394156 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 297
        cadR 1390131 .. 1390141 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS06685 1389109 .. 1389148 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAC CTAG GTGTGAACTGTCAATAGG   TTGTATTTGTCCAGG  64 4
LK412_RS06680 1387960 .. 1387974 -  -2.7  -3.57144   CCCTGCAGCTGGAAA               TGGCC CTGTC GGCCT               ACATGACCGAGCAAG  50 129
LK412_RS06640 1379849 .. 1379883 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS06620 1375763 .. 1375773 -  -6.8  -3.40878   ACGAGGCGAACAAGA                 GCTC GGT GAGC                 GTGCCCGACAGCGCG  56 335
LK412_RS06600 1369405 .. 1369425 -  -8.1  -2.62263   AGTCGGGCGAGATCA            CGCTGTCCG GCC CGGCCCGCG            AGATGCTGCACGATC  48 139
LK412_RS06525 1344986 .. 1345006 - -15.4  -5.13343   CAATGCAAAATAAAA            GGCGGGGC ATGCA GCCCCGCC            TCAAATAATAACGAC 100 92
LK412_RS06520 1344389 .. 1344404 - -10.4  -4.62069   CCGGCATGGCAAAAA              GGAGCC TTAG GGCTCC               TTTTTTGCGTTCTGG  93 81
LK412_RS06490 NONE
LK412_RS06485 NONE
        lpxK 1335979 .. 1336005 -   -15  -3.60865   GATTCTAAAGCAGAA         CGCCGGCTGCGC GGG GCGGCGCCGGCG         CGGCCGGGTCAGGGT  81 34
LK412_RS06475 NONE
        kdsB 1334897 .. 1334913 -  -2.1  -2.64099   CGGTCCGAGCAGAAT              GAGACGC ATG GGGGCTC              CTGATGGGTTTGTTT  38 108
         adk 1334185 .. 1334243 - -13.8  -3.39895   TTGGCTAGCAATGAA GGCGGGCAGGGCG-CGCG-CGGCCGCGCA CCCC TGCGCGGGCGGCGCGGCGGCCT-CGCGGC GCGGTTTAGCTCTGC  77 31
LK412_RS06460 1333360 .. 1333388 - -18.2  -2.84602   GCCAGGGTACCAAAG        CAACGTGCCGGC ATCGA GCCGGCACGTCG        GGGGGAGGGATTACT  86 36
        murJ 1331700 .. 1331732 -   -12  -4.20516   TGTCGATCCAATAAA      TGCAAAGACCGGCC GTAAG GGCCGGTCTTTGTT      GTGATTTTCACTATT  91 65
LK412_RS06450 1330495 .. 1330518 -  -6.8  -3.58037   TATGAATTCGGCAAA          GTCAGACATTG TAT CAA-GTCCGAC          GGGGATTGCAAGCCC  58 74
        rpsT 1330142 .. 1330159 - -11.3  -5.45802   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTTGCCGTA 100 69
LK412_RS06430 1327441 .. 1327451 -  -2.4   -3.7941   CATCGTGGAGAACAA                 GGGC GGC GCCA                 ACGGCAATATCGGCT  54 342
LK412_RS06385 NONE
LK412_RS06380 1317589 .. 1317601 -  -3.3  -3.07233   TGACAATGGGCAATA                TAGGC TTA GCCGA                TGCTCTTGGCGGCTT  42 18
LK412_RS06375 1315797 .. 1315816 - -13.6  -5.40072   CGCCGGGCAAAAAAA            GAAGGCCC CGCA GGGCCTTC             TTCCGGCATGGGTGG 100 44
        pdxA NONE
LK412_RS06365 1313241 .. 1313271 - -11.1  -3.06183   CTCAGCTCGATGGAA      GTGCGCGCCCG-CGC GCG GCGCCTGGCGCGC-C      AGTGCGGGCAGCTGG  62 459
LK412_RS06305 1303358 .. 1303376 -  -5.8  -3.14931   TCGAGGCGTTAGCAA             GCGTGGCC GAT GGCAGCGC             CGGGCCCGGGCAAGG  49 98
LK412_RS06300 1302145 .. 1302184 - -10.1   -4.7497   CGCACGGATGAAAAA  GCCAGGACGGC-TGAG GTCGTGTCG CTCATGCCGTTCTGGC  GCGAAGAAAAATCGG 100 109
LK412_RS06295 1300769 .. 1300803 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS06270 1295421 .. 1295439 -   -11  -3.55444   CCTTCACGCTGGAAA             CGCTCGAC CTG ATCGAGCG             CCGCATGGGCGAAAT  71 424
LK412_RS06260 1292675 .. 1292709 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS06240 1286330 .. 1286371 - -26.8  -3.54903   ATATAAAATGGATAA GACCCGATGCGT-GCCGGC AACGG GCCGGCGACGCATCGGGTC GGAAGGGAACGCGCC 100 62
LK412_RS06235 NONE
LK412_RS06230 1284531 .. 1284546 -  -3.3  -4.28548   ACGGAGTGATGAAAA              GAATC GTGCGG GATTC               AGCGGTGCGACATGC  63 24
LK412_RS06225 1283632 .. 1283657 - -20.5  -4.56597   CGGCCGGGTGAAAAA         GCCAAGCCGCC CGAG GGCGGCTTGGC          GGGATGCAGGCCCGG 100 68
LK412_RS06220 1283417 .. 1283462 -   -28  -5.84381   CCAGCAAGAAAAAAA CCAGCAAGAAAAAAGCCGCT TCCATG AGCGGCTTTTTTCTTGCTGG CCTTGTTGCTGGCCT 100 58
LK412_RS06215 1282213 .. 1282225 -  -3.3  -4.11216   GCGCGACTCGGAAAA                CCAGC TTA GCTGT                GAACTGTCAATAGGT  59 18
LK412_RS06210 1280995 .. 1281012 -  -5.5  -3.29144   CCAGCGGCGTCAGAA             CGCCTCT TCGT AGAGTCG              CGTGGCGTCGGCCAG  51 2
LK412_RS06175 NONE
LK412_RS06170 1274987 .. 1275004 -  -5.5  -3.15544   GTCCAGCCCCAGCAA             CCGGCCGG CCA CCAGC-GG             CAACTCGATCTAATG  49 35
LK412_RS06165 NONE
LK412_RS06160 1273192 .. 1273229 -  -6.2  -2.80699   TCGGAACGAATAGCA  CCGCGCCGACCAGCCACG CCAT CGCGGCCGGA-AGCG-GG   AATCGGTTAATTATC  47 32
LK412_RS06155 NONE
LK412_RS06150 1270995 .. 1271034 -  -6.5  -3.17075   CGGCTCGTAAGGCAA GGCCGTGACATGGCC-GTA CGAA TACAGGCCATCGCACG-CC  TGCGCCTTGCGCATC  51 275
LK412_RS19870 1268977 .. 1268987 -  -5.4  -3.25823   GCCTGTCTATATGAA                 CTTC ATG GAAG                 CCAGCTCGGAAAACG  51 6
LK412_RS06135 NONE
LK412_RS06130 1266858 .. 1266884 - -10.9  -4.52857   ACGTGTCATAGAAAA        CG-GCCAGGACA GCCT CGTCCTGGCGCG         CCAGCCGTCGCGGCC  95 46
        soxR NONE
LK412_RS06115 1265180 .. 1265205 -  -5.4  -3.34398   GCGCGGGCGCAAAGA         CCGGC-GCACC ATCGG GATACAGCCGG         CAATACTGCCTTACG  51 57
LK412_RS06110 1262784 .. 1262818 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS06095 1260338 .. 1260354 -  -4.3  -3.14132   CCGCTGCTCTACCAA              CTGAGCT AAC AGCCCGG              CGATTGCTGCCTGTC  47 140
LK412_RS06090 1260237 .. 1260266 - -17.3   -5.0925   GCCGAAAAGCAAAAA       GGCCGTTAGTGAC TACT ATCACTAACGGCC        TTACAAATCATGGTG 100 36
LK412_RS06085 1259436 .. 1259464 - -17.5   -3.6053   GGCTCTAGAAACCAA        GGCCTTGCAACTC GAT GCGTTGCAAGGCC        TTTTAAAAATGGCGG  89 89
LK412_RS06055 1253367 .. 1253383 -  -5.8  -3.05596   CATGCCCTGAGCGAA             GGCG-GG CCGG CCGCGCC              GCTGATCACGTATTC  48 332
        panB 1251579 .. 1251594 -  -3.2  -4.07568   TGCCTGTGGCGAAAA              CCCTACG GCG CGC-GGG              AGCGGGTTTGCAGGA  59 253
LK412_RS06040 1249935 .. 1249969 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 256
LK412_RS06010 1244034 .. 1244053 -   -10  -3.33261   CCTGAACCGCGACAA            CGT-GGCGG TGG CCGCCGACG            CCATCGCCAGCGTGC  63 72
LK412_RS05980 NONE
LK412_RS05975 NONE
LK412_RS05970 1235286 .. 1235306 -  -8.9  -3.46602   CCGTGGACATCACAA            TGGCGCAGG CGG CCCGCGCAA            GGTTACTCGGTACAA  60 84
LK412_RS05965 NONE
LK412_RS05960 NONE
LK412_RS05955 1232358 .. 1232380 -  -6.9  -3.35679   CGGCGTGACGCACAA           GGCCGTGGC GCGTT ACCAGGGCC           TGCTGGTCGATGCCT  52 304
LK412_RS05945 NONE
LK412_RS05940 1229181 .. 1229203 -  -5.4   -3.7941   CACGGTCTACAAGAA           GCTGATCCGC ATC GCCGACCTGC           ACGACGTCAGCTCGT  58 115
LK412_RS05925 1226290 .. 1226320 -  -6.8  -3.39784   GGAGCCTGAAGAACA      TGGCCGAGCA-GC ATCCCG GCACGCTCGGCCC       CAGCCTGGTGCGCCA  55 431
        gcvA 1221771 .. 1221813 - -10.5  -3.56092   GGAGCATCGCGCAAA GCGGCGACCTG-ATGGTGGC CATG ACCATCGCGCAGGCCGCCGC GGCGCTCACGCTGCC  67 412
LK412_RS05885 1218675 .. 1218713 -  -9.6  -3.14132   GGCCTGGCCGAGCAA GTGCG-CCGC-CGCACCGG CATG CCGGTGCGCGCGGTCGG-C  GGCATCGCCGATCCG  60 213
LK412_RS05875 NONE
LK412_RS05830 1209431 .. 1209463 -  -3.4  -2.78463   ACCGCTGGCAGGAGA     CCCTCAG-CGGCC TGCCGTTC GACCGGCTGATGG      AGCCGGCCGAAGTGG  40 172
LK412_RS05775 1200895 .. 1200905 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 64
LK412_RS05770 1199733 .. 1199753 -  -2.4  -2.59267   GGCAAGGACACCAAG            CTGCCCGA TTACG TCGTGCTG            ATCTCGACGCTGGGC  38 163
LK412_RS05755 NONE
LK412_RS05750 1196372 .. 1196387 - -10.4  -5.86332   GCAAGGCAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 58
LK412_RS05735 1193624 .. 1193643 -   -15   -4.8622   GCCGGCAATGAAAAA            GGCGGCTC ATGC GAGCCGCC             TTTTTCATTGCACGC 100 49
LK412_RS05715 NONE
LK412_RS05710 1188428 .. 1188456 - -14.6  -5.40072   GGCCGGCGAAAAAAA       GCCCCGCTGG-CG TGGT CGTCCAACGGGGC        GGCTGCATGGCGGGC 100 78
LK412_RS05705 1186902 .. 1186930 -  -5.2  -3.36569   GGAAGCCGCCAAATA       CATTGACCGCCGC CAGG GCGACGG-CGACG        ACGCCCATGGTGCGC  53 231
LK412_RS05695 1185062 .. 1185074 -  -4.7  -3.55622   GGGAACTGCTGGAAA                GCGGC GAG GCCGA                TGCCTGGAGCCTGGA  54 334
LK412_RS05685 1181946 .. 1181956 -  -6.8  -3.31144   TCGCCATGGTCAGAA                 CGAC ACC GTCG                 CCGTGGCGTAATAGG  54 9
LK412_RS05680 1180546 .. 1180562 -    -5  -3.15544   GGCCATCGTCATGAA              CGCCTC GGGTT GCGGCG              CCATGGTGAAGGAGT  47 489
LK412_RS05655 1162291 .. 1162328 - -16.4  -3.61398   TGTCGGTTTCAAGAA   CGGCACCGACGGCAAT GTGAAG ATCGCCGTCGATGCCA    TCAAGGCCGCCTCGC  85 523
LK412_RS05635 1158632 .. 1158653 - -18.7  -5.06414   GTGGCGCAATAAAAA           CGGCGCGCC TTGA GGCGCGCCG            GCATTCCGGGACGAA 100 49
LK412_RS05605 1154398 .. 1154414 -  -5.7   -3.4277   AGGCAAGACCTACAA              CGAGGCC AAG GACCACG              GGTTCATGTACCAGC  55 128
        chrA 1151580 .. 1151601 -  -3.6  -4.11216   GGGCCACGTGGAAAA           GCCGCTGCC GGTAT GGC-GCGTC           GTCTACGACGATCCG  63 280
LK412_RS05570 NONE
LK412_RS05565 NONE
LK412_RS05560 NONE
LK412_RS05555 1144550 .. 1144569 -  -2.8  -3.23216   GCGCACCACGAGCAA            GGCATAGCC TCG GGC-ATGGC            GTCGACGACGCTGAA  43 280
LK412_RS05545 1142817 .. 1142838 - -18.7  -3.28712   TTGGTTCGCCGACAA           CCCCCCGGG CTTG CCCGGGGGG            TTGTCGTTTGTGGCG  93 70
LK412_RS05490 1131459 .. 1131470 -  -5.8  -3.01712   GGCCGCGCGCCAAGA                TGGC CATC GCCA                 GCCGCTTCCGTACCC  48 303
LK412_RS05480 1129152 .. 1129162 -  -4.6   -4.0371   CATGTTCCATACAAA                 GGCA CGG CGCC                 GGCCATGGTGGACCT  63 455
LK412_RS05460 1126627 .. 1126637 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 81
LK412_RS05455 1125479 .. 1125507 -  -5.3  -3.87373   GACAGCGCGGATAAA       CCAT-GCGCCCA TCATGG CGGGCGCAATGA        ATTGTCCAAATGTGC  60 141
LK412_RS05445 1123247 .. 1123261 -  -3.5  -3.72576   GCGCGCCCGAGCAAA               CCGAC ATCAG GTCGA               AGCGGCCCTGCGCGC  54 348
LK412_RS05415 1117290 .. 1117304 -  -3.5  -3.94746   TGAGATTCAAGCAAA              CGCTGC GCGT GC-GCG               CCCTCCGGCACATTC  59 63
LK412_RS05410 NONE
LK412_RS05405 1114438 .. 1114452 -  -4.2  -3.14931   TTCACGTTCGATGAA               GTGGTC AAC GACGAC               GACACCGTGCTCGAC  45 266
LK412_RS05365 NONE
LK412_RS05360 1106732 .. 1106743 -  -5.8  -3.78022   GGTAGAGGGATGAAA                CAGG AAGG CCTG                 GGACCGCTACTGAAG  60 183
LK412_RS05350 NONE
LK412_RS05345 NONE
LK412_RS05340 1103132 .. 1103147 -  -8.2  -3.53444   TCACCGCGTTCGAAA              GCGCGG ATAT CCACGC               CGAGGCGCGGCGGCT  61 167
LK412_RS05320 1098765 .. 1098775 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS05315 1097623 .. 1097659 -  -5.1  -3.02144   GCAGGGGCTGGAATA    CATAGACGGGCTGGT GCTGTCG ACCAACCGGCCGATG    CTGACACTGATGACG  46 127
        gltX 1093534 .. 1093562 -  -4.4   -3.2614   CACCTTGCAGACCAA       CGCGACGCAGATG GTGC CGGCCGCG-CGCG        GCACCGCGGTGGCCT  47 226
LK412_RS05280 1087659 .. 1087694 -   -24  -3.73224   TTAGTTGTTACCAAA    TGCGGCGGGCGCGCCC TGCA AGGCGCGCCCGCCGAA     GTGATCGCTCTGAAT 100 47
LK412_RS05275 NONE
LK412_RS05270 1083098 .. 1083149 - -18.2  -2.83677   AATGAATTCAGCACA GCCATTTGATATGGCCCCCG-CAAC CTC GTCGGCGCGAGCCATTTCAAATGGC GCCGATAGGCGGCCT  86 141
LK412_RS05265 1082351 .. 1082373 - -20.6  -4.65895   CGCGGGACGGAAAAA           GCCGCCTGGC GGA GCCAGGCGGC           TTAAGGTGCTGCTAA 100 57
LK412_RS05260 1081389 .. 1081426 - -12.5  -2.64155   GCTGGCGGAAATCGA   CGCGGCCCTGCATGCCC TGCC GGGCGTGGCGGGCGGCG    CCTGCGCCGTGCTGC  62 290
         mpl NONE
LK412_RS05190 1068512 .. 1068527 -  -2.4  -2.64354   GTACATAGTGAGAAT              CCATCG GGCG CGGCGG               CGTCAGGAGCGCCCC  38 72
LK412_RS05185 1066564 .. 1066583 -  -2.7  -2.76468   CAGGATCGAAGAGGA            GGAAGCG GAGCGT CGCACCC             GTGCATTTTAGGGCG  40 61
LK412_RS05180 NONE
        aroE 1064777 .. 1064787 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS05170 1063755 .. 1063794 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
LK412_RS05165 NONE
        pagP 1061795 .. 1061818 -  -5.2  -3.28712   CGGCTCGCCCGACAA          TCCGGGCC TGGTGTTC GGCCTGGA           CCGTGGCGGATGCTG  49 374
LK412_RS05135 1057781 .. 1057802 -  -9.3   -4.1891   GGCCGGCAAGATAAA           GCCGCTGGC GGTG GCCGGCGAC            AAGCGCCTGAGCGAC  75 332
LK412_RS05110 1051447 .. 1051475 -  -8.7  -3.51032   ATTCGTGAAGCACAA        GATCCTGGACGCC ATC GGCGACCTGTATC        TGCTGGGCAAGCCGC  61 307
LK412_RS05025 1030310 .. 1030320 -  -4.6  -3.30771   GCACATGCTCTACAA                 CCGC AAT GCGA                 TTTTCACGGGCGGCG  49 481
LK412_RS05010 1028009 .. 1028021 -  -7.7  -2.54523   TGAGACGGGAAGGGA                CGTAC GCC GTACG                CCCTTTGGCCCGATC  50 43
        hppD 1018810 .. 1018830 -   -14  -3.60151   CGCCCGAAATGACAA            GGCCCACC GCGAG GGTGGGCC            TTACTCGCGCCAGGC  78 46
         lgt 1014916 .. 1014928 -  -9.1  -3.18681   GGGCAAGGTCATCAA                CTGGC GCG GCCAG                GGCGAGGTCGTGCTC  59 384
LK412_RS04940 1013191 .. 1013204 -  -5.2  -3.21099   CTGCTCTAGCATCAA               CGCG GTAACT CGCG                CGCAGTATTCATGCA  49 450
LK412_RS04920 1011020 .. 1011035 -  -6.1  -5.24129   GGCGGGCACAAAAAA              GGCAC TTGGTG GTGCC               GTTTGGTTTTCTGTA  90 220
LK412_RS04915 1010457 .. 1010471 -  -4.2  -2.94411   AGGTTGTCAAACAAT               TCCATG ATT CATGGT               CTCCTTAGTTCATGC  44 30
LK412_RS04910 1008901 .. 1008918 - -14.1  -6.11644   CGAGGCAAAAAAAAA             CCGGGCC CGAG GGCCCGG              TTCGCGCCGGCCGGC 100 63
LK412_RS04905 NONE
LK412_RS04900 1006091 .. 1006130 - -26.5  -3.05384   GGCGGCCTGATCGAA  CG-GGCGCCGGCCGCCCG GGCTG CGAGCGGCCGGCGCCGCG  GCCTCAGTCGCGCAG 100 29
LK412_RS04885 1003599 .. 1003620 -  -6.5  -2.87132   TCCTTGCCGCATATA           GCGGCGCAT ATGC ATGCGCCAG            GCCGAACAAGGGAAA  48 257
LK412_RS04880 1001830 .. 1001880 -  -5.1  -2.50034   CATGAAGGGAAAACG CCCGGTGGAGCGCAGCGGCGCGGG CAGG CCCGCGCCGC-ATGGTCCGGTTGG GTCAGGCCTTAGCCG  44 34
LK412_RS04875 1000550 .. 1000567 -  -9.1  -3.14132   TCCGGCGCGCATCAA             GCC-GGCG CTG CGCCAGGC             GCGCTTGCAGGCGCT  56 68
LK412_RS04860  996652 ..  996676 -  -8.4   -4.1899   CGACCCTAGGGAAAA          CCCCGGGAGG ACGGG CCGCCCGGGT          TGGCGTGTTCAGCGC  76 34
LK412_RS04855 NONE
LK412_RS04850  993973 ..  993988 - -11.8  -5.18357   GAAGGCATGAAAAAA              GGCGGC CGCG GCCGCC               TTTTCCGGATGGACA 100 50
LK412_RS04845  992710 ..  992744 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 259
LK412_RS04805 NONE
LK412_RS04800  984219 ..  984237 -  -2.2  -3.57263   ATTCCGACGCGGAAA             GCCCCTGG ACG CCCGGGAT             GGCCGCCGTTTCAGT  48 36
        dapF NONE
LK412_RS04790 NONE
        xerC  981134 ..  981169 -  -8.9  -2.80816   GCCTGATCGAGTACA    CGCAGCGCGACGCCGA GTTCA CCGGCGTCGAGG-GCG    AAGTCCGGCACCGCT  52 436
LK412_RS04745  974333 ..  974359 -  -3.8  -3.93556   ATCGATGCAACGAAA         GAAGATGG GGGCGGAATTT CCATCTTC         AAGAGGGGACGGAGC  59 76
LK412_RS04740  972899 ..  972915 - -10.1  -2.57795   TCCACTATGAATCGA              TCCGGGC GCG GCCCGAA              TATTCGCGCCTGGCT  57 128
        dksA  972337 ..  972360 - -13.2  -5.07652   GGTCCGAAAACAAAA          GGGCTATGCC GTGG AGCATAGCCC           TGGTAATGCGTTCGG 100 76
        hslV NONE
        hslU  970361 ..  970386 - -11.9  -3.81027   TCCAAGTAAGGGAAA         GGCCGCGCTACA GCA CGTAGCG-GGCC         AGGTCCTGGCTGCCG  79 7
LK412_RS04715  969015 ..  969025 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
LK412_RS04710  967867 ..  967904 -  -2.7  -4.21908   CACGATTATGCAAAA  GAT-CAC-CGGCAGGCG AAAGCG CGCCGGCCGCGTGCATT   GATACATAAAGACGC  63 132
LK412_RS04705  966228 ..  966241 -  -3.7  -2.62263   AGCGCGCCTACAGCA               GCGGC TCGA GCGGC                AGCAGCGAGAACAGC  40 4
LK412_RS04680  961575 ..  961617 - -11.9  -3.18681   GGCGAAGCGCAGGAA CCCGCGGCCCGGCCGGCCGGC GAC GCC-GCCACCCGTGC-GCAGG TCCAGGCCGAACTGG  64 354
LK412_RS04605  948750 ..  948764 -  -3.4  -3.96327   ACGGTCGAGGAGAAA               GACCGG GCG CAGGCC               GCCATGAATTTCTGC  58 202
LK412_RS04595 NONE
LK412_RS04590  945350 ..  945384 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 280
LK412_RS19830 NONE
LK412_RS19825  943166 ..  943191 -  -8.9   -4.7254   ACGCGTCATGAAAAA         GGCCGCCAAGCG CGG CGC-CGGCGGCG         CGCCGGCCGGGAGCG  86 46
LK412_RS04560  935408 ..  935447 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
LK412_RS04555  934215 ..  934229 -  -4.9  -2.88249   GATATTGGTCACATA               GCGGC ACTCG GCCAC               GCCAGGCAGCGGTGT  44 173
LK412_RS04550  933173 ..  933184 -  -2.2  -4.11484   TGCAAGGGCGGAAAA                CCAA GCTG TCGG                 TGTATGGTTAGAGCA  61 513
        mutM NONE
LK412_RS04445  909725 ..  909735 -  -8.2  -3.53012   CGCGGCCGGCGCAAA                 GGCC GCC GGCC                 GGGCCCATCGATGCG  62 50
LK412_RS04440 NONE
LK412_RS04435  907584 ..  907594 -  -6.8  -3.85817   ACGGTGCCGCAGAAA                 CTGG CGG CCAG                 CGCCGCCCCGCATTT  63 189
        hmgA  905282 ..  905292 -  -2.4  -4.19238   TTTTGAATCGGAAAA                 TGGC CGG GCCG                 CAATGCCCAACGGCG  62 92
        fahA  903827 ..  903854 - -21.4   -4.8622   GCCCGCAAGGAAAAA        GGTGCCTGTCCC GGTT GGGACAGGCACC         TTCGGCAAGCCGGAG 100 108
LK412_RS04390 NONE
         pgi  893861 ..  893891 -  -3.9  -2.57132   CTGCTGCGCGACAAG       GGCGTGCGG GAATTCGTCGAGG CCGCGCGCC       TGCTGCGCCAGCGCG  40 506
LK412_RS04330 NONE
LK412_RS04325 NONE
LK412_RS04320  879102 ..  879120 -  -4.4  -2.62184   CCTCGCCCGAGATCA             TGGAGCGC GTG GTGCACCA             GGTCATCCGCGAGGG  40 362
LK412_RS04310  876025 ..  876058 -  -5.1  -3.21099   CGGCTTGAGCACGAA     GGTGTTGCCGCAGGC CAGC GCCACCGGGAACATC      CAGCACGGCACCATC  49 495
LK412_RS04300  873144 ..  873164 -  -3.8  -3.11459   AATACCAGCATGGAA            CTCCCTCG GGTTG CGCGGGCG            GGCCAGGCCCGCCCT  45 46
LK412_RS04295 NONE
LK412_RS04290  870989 ..  871042 - -15.3  -3.01712   TGGGCTCCTGGAACA CCATGGCCATGCGCGTGGCGCGCAG TTCGCG CCGC-CGCCGCGCGC-TGGCCGTGA CGATGTCCTCGCCCA  77 291
LK412_RS04280  868200 ..  868210 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS04275  866950 ..  866966 -  -2.1  -4.62783   GACGTAGCCGAAAAA              CGGCGGA AAT TCATCCG              GAAACTGGCTAAAAG  70 255
LK412_RS04200 NONE
LK412_RS04195 NONE
LK412_RS04190 NONE
LK412_RS04185  852883 ..  852910 -  -8.2  -3.78775   TGCGCCACCAGCAAA        GCCGCGGCCGCC CGCT GGCGGGCGAGGA         CGCCGACAAGGTCAT  67 131
LK412_RS04110 NONE
LK412_RS04105 NONE
LK412_RS04100  835358 ..  835372 -  -7.8  -3.30771   GGACATGGCGCAGAA               CAGGCC GTC GACCTG               CGCCATGGCCAGGCC  56 163
LK412_RS04090 NONE
LK412_RS04085  832183 ..  832217 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS04075  827883 ..  827905 -  -4.8  -4.67982   TGCCACCGAAGAAAA           CCAGGCCATA CCC CATGACCTGC           CAGACGGATAAGGCC  75 224
LK412_RS04065  825790 ..  825813 - -13.8  -2.54702   ACAGACGCGAAGGCA          GCTCGCTGGC CACC GCCAGCGCGC           GCCGGTGCGCACCCA  69 511
LK412_RS04050  823140 ..  823150 -  -8.2  -3.53012   CTGCGGGCGCTGAAA                 CGGC CGT GCCG                 CGTCACCATCCACAC  61 275
        gloB NONE
LK412_RS04030  819818 ..  819843 -  -3.3  -2.71712   TTGCCTTGCGGAAAG         GCCGCTA TTGTAGGAATTT TAGCGGC          TTGGCGGACGGGCGC  40 64
        fabI  818942 ..  818970 -    -6  -3.78419   GGAGGAAAGATACAA        GGCACCGG AGGTCGAATTTGG CCGGTGCC        AGTCCCCCTACGGGG  62 57
LK412_RS04020  817686 ..  817715 - -17.9  -2.62616   CGATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACCC        TCCCTGCGGGGACAG  85 56
LK412_RS04010  815960 ..  815993 -  -8.9  -3.53091   ACCTGGCCGGCGAAA     TGCTGC-GCCAGGC CAGCGGC GCCTGGTTGCAGCA     CGTGCCGTATCGAGG  61 460
LK412_RS03990  812212 ..  812222 -  -4.6  -4.12188   TCATCAGGGCGAAAA                 CCGG TAG CCGA                 TGCCCCACACGGTCT  62 3
LK412_RS03985  810721 ..  810773 - -14.1  -3.33696   GTGTTCGGCAAGGAA CGCCGGCCGGTGCCGCTCTTGCCGCC GCCG GGCGCCT-GA-CGGCG-CGGCCGGCG GGTCAAGCCTTCGCA  75 28
LK412_RS03970  806391 ..  806428 - -16.9  -3.18274   TGGATTGGAATGGAA   GCGCCGGCCGCCGGCCCG AAG CGGAG-GGCGGCCGGCGA   CAGCGGATTGTCGGG  84 85
        minC  805418 ..  805436 -  -2.4  -3.86346   TTATGTGCGTACAAA             TCGCGTTA TCG TAAAGCAA             AAAGCGTATGAAGGC  54 87
        minD NONE
        minE  804131 ..  804149 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 191
LK412_RS03925  798340 ..  798376 -  -3.4  -3.29471   CTCGGACTACATCAA    GTTCGCCCGCGCGCGC GGCCT GCGCCAGCGCGCCATC    CATTTCGGCCACGCG  46 405
LK412_RS03905  793798 ..  793817 - -10.6  -5.50499   TTACAGGTAAAAAAA            CCGCTGGC CCTT GCCGGCGG             TTTTTTTATGCGCGG 100 49
        uvrA NONE
LK412_RS03895 NONE
LK412_RS03890  785700 ..  785742 - -14.1  -3.07935   ACGGCAGGCACGGAA GTTTGCCGGTGCCAGTCCCC CTGC GGGGACAGGCACCGG-AGTC AGTGGTATTGCACCT  72 24
LK412_RS03885  784026 ..  784041 -  -2.4  -3.01712   GGCGGGTCGTCAATA              TCGGCA GCCG CGCCGC               GCTGGGCAAGCCCGG  41 437
LK412_RS03870  780914 ..  780948 -  -5.4  -3.53811   GGGACTGCGGGCAAA     GAGCCGGGCGGCGGAC ATG GTCAGGCGGCAGGCGC     GGCGGCGAGCAAGGC  54 11
LK412_RS03865  779671 ..  779695 -  -9.1  -3.01712   GCGCCGGCGGCAAGA          CCGACCCGCTG GCG CTGCGCGCCGG          CGACCTGTCCGAAGC  55 524
LK412_RS03855 NONE
LK412_RS03850  776977 ..  776994 -  -2.6  -3.05463   ACCGGCTGGATGGAA             GGCTGT CAGTGT ACCGCC              AACGCCGCGCCCGCG  41 52
        pdxH NONE
LK412_RS03840 NONE
LK412_RS03835 NONE
        purU  773694 ..  773708 -  -5.6  -3.05384   CGTCCCTGCAGGCAA               CGGCCT TGC AGGCGG               CCTTGCGCCATTTCG  46 65
LK412_RS03800 NONE
LK412_RS03795  767433 ..  767451 -    -8  -3.57144   TGCGCGACCTGGAAA             CCCTGGCC ATC GACCTGGG             CATGGACGTGCTGGT  60 344
        apaG  761558 ..  761588 - -10.3  -4.13945   ATGCGGATCGGAAAA       TCACCGTGCCGGG AGGAG CCCGGCTCAGTGC       AGTGTACGCGGCATG  78 19
LK412_RS03755 NONE
LK412_RS03750  759076 ..  759100 -  -3.4  -3.08032   TGCTCCTGAAAACGA         CGGCC-CGCTC AATT GCGCGAGGCCC          CTTCGATGAGTTGCC  44 9
        dsbC NONE
LK412_RS03740  757037 ..  757071 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 207
LK412_RS03720  753555 ..  753569 - -11.4  -3.57144   GTGCGCACGCGCAAA               CAGGGC GAG GCCCTG               GCGCTGGCCACCGTG  71 267
LK412_RS03710  751151 ..  751170 - -16.4  -3.75153   GCGCGCCAATGGAAA            CGCCGCGC ATGC GCGCGGCG             TCGGCAATCGGGCGG  88 81
LK412_RS03690  747777 ..  747789 -  -3.3  -3.04792   TCACGATGGTTAATA                TCGCT ACG AGCGC                TTGCGCAGCATCAAT  42 16
        atpB  746791 ..  746811 - -14.7  -2.52676   GATCTTGCTAACGGA            CGCCCGCCA CCA TGGCGGACG            CCGAAAATTTGGGAT  71 40
        atpE NONE
LK412_RS03675 NONE
LK412_RS03670 NONE
        atpA  743651 ..  743689 - -12.2  -3.53012   GCTTTCCTGTTGAAA   CGGCTTGGCGGGTTCAGC CGG GCTGTCCCCGCCCTACCG   TAGGATGGGCGGCAC  74 67
        atpG NONE
        atpD NONE
LK412_RS03650  740792 ..  740819 - -18.6  -2.91924   GGATGCGCCAGAAAC        GACAAAGGCGAC CGAA GTCGCCTTTGTC         TGCCTGACGCGGCGG  89 58
LK412_RS03645  739707 ..  739736 -  -2.2  -3.09581   CAAAGGGGCAACAGA       CACGACTATCC TTGGTGATC GGA-AGCCGTG       ATTTTACTGCCCTGG  42 74
        hemE  738424 ..  738441 -  -4.1  -3.60048   CTTTGGGGAAAAAAC             GCTAACA AGGG TGTGAGC              TTTCAGGGTCGTGCC  51 217
LK412_RS03635  736196 ..  736222 -  -5.7  -2.62184   TGTTCGGTCAGAGTA        CGGGTTCGAGCG CCGG CGC-CGGCCCCG         CTCAGATCTCCAGCG  44 27
LK412_RS03630  734067 ..  734077 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS03625  732958 ..  732999 -  -8.5  -3.14132   CTGTCCCTGCACCAA GGGCGTGGGTGCCTGTCCC CGTG GGGACAGGCACCTTGTTCC  CCCCTCCGCAACGCC  56 89
LK412_RS03575  721837 ..  721849 -  -9.1  -3.33696   GCTGCGCGTAAGCAA                GCGCA TGC TGCGC                CAGGCCGACCGCGCC  59 219
LK412_RS03560  719440 ..  719454 -  -2.7  -4.21607   TCGAGGGAATATAAA               GTGGG ATGGG CCCGC               GCGGCGTCAGATGCG  63 32
LK412_RS03555  718258 ..  718272 -  -3.4  -3.78934   CGGCGCGCACAACAA               CGCGGC TGC GCTACG               CGTACGCCTTGAGGG  56 21
LK412_RS03540  714822 ..  714835 -  -2.3  -3.07935   ATTCTATCCATTGAA               CTACG GGCG CGAAG                AGGCGACATTGTACC  41 184
LK412_RS03535  714756 ..  714771 -  -4.6  -3.53224   TAGGGCCTTGGGAAA              CTGGCG CGCC CGACAG               GAATCGAACCTGTAT  52 11
LK412_RS03525  712493 ..  712515 -  -5.5  -3.15579   GCAACCGGGGAGCAA          GGCGCACGCC GGCC GACGC-CGCC           ACGGCGCATGGGCAG  49 168
LK412_RS03520  711691 ..  711749 -  -7.9  -2.52623   GGTGCCCGACAACAC TTCGGGCTGCGCCGCGCCG-CGCC-GGGC TGG GCCCAGGCGGCCTGGCGCCACAGCCCCAG GCCCGCCAGCACGCC  49 140
LK412_RS03510  708939 ..  708975 - -10.9  -3.15544   TTCGACGCCGACGAA   GCGCGGCGCA-TCG-GC TTCGT GCGCGACTGCGCCGCCC   AGGCGCAGTGGCCCG  64 217
LK412_RS03490  705539 ..  705591 - -27.1  -3.02144   CCAGGCGCTCGAAGA CGCCGCCTGAAGCGCGGCGGCCGC CAGCCC GCG-CCGCCGTGCTTCAGCCGGCG TTGGGCGCGGCCCAG 100 16
LK412_RS03475 NONE
LK412_RS03470  700980 ..  701009 - -11.3  -2.62263   ACGTCGCCGACACCA       GCGCCATCCAGCG CACC CGCTGGCCGGCGT        CGGGAAACAGGTCCG  59 509
LK412_RS03460  698662 ..  698714 -  -9.2  -3.04501   ATCAATTCCGCAAGA GCCTCATGCAG--GCCGCCGCGCGCG GCGTG CGCGTGCGGCTGCTACTGCA-G-GGC AAGCCCGAATACCGC  55 403
LK412_RS03405 NONE
LK412_RS03400 NONE
        lptC NONE
        lptA NONE
        lptB  683233 ..  683248 -  -3.2  -3.66288   TATTGGCCAATACAA              GTTGCG CTAG CGCAAG               ATTGTGTACGTTTGA  53 108
LK412_RS03375 NONE
        hprK  680965 ..  680977 -  -4.7  -2.71144   CAGCTGGGGCAACCA                GGCCG GCG CGGTC                ACGCCGCTGGACGTG  43 127
        rapZ NONE
LK412_RS03350  676944 ..  676954 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS03345  675490 ..  675524 -   -10  -3.41229   ATAGTTCGAGCAGAA    CCTGGCGCGC-TCGC TCAGCG GCGAGGCGCAGCAGG     ACCCGGCGCAACCGG  65 441
LK412_RS03280  664504 ..  664525 -  -7.3  -4.61873   GCGCACAAATGAAAA           TGCCCAG TGCAAGGG CTGGGCA            TCGAATTCTTGGTGG  79 35
LK412_RS03240 NONE
LK412_RS03235  650037 ..  650092 -  -7.4  -4.18197   AGGCGTGATCGAAAA GCA-GGTGGCCATCGTCGCGCCGGCCA AGG TGGGCAGCACGCTGACGGCCATCGTGG AAATCACGCTGGACG  73 304
        glmS  647536 ..  647574 -  -8.1  -2.56715   ACCTGGACGAATGCA  CCATCGGGCGCGACAAGGC CGT GCAGCG-CGCG-CCGATGG  ATATCGCCCGCCTGC  48 330
LK412_RS03205 NONE
LK412_RS03200  641282 ..  641336 - -20.2  -2.50779   ATGACAAGCCAACAG CATGCCGGCG-GC--GCGTCGCGGCAA GGCC TTGCCGCGACGCATGCGCGCCAGCCTG GGCCGCCTACTGTCA  95 38
LK412_RS03195  639822 ..  639833 -  -7.2  -3.51934   GCCCCTGCAGAAAGA                GCGC TGGA GCGC                 GGCGGTCGATGTGGT  58 449
LK412_RS03185 NONE
LK412_RS03180 NONE
LK412_RS03175 NONE
        argE  635144 ..  635193 -    -2  -3.50133   TAGTTGTAGAAAAAG CGCCACCGTCATGGA--CCGGACC CGAA AGCCCGGCGTTCGTGACGGGGGGG TACATCACCACTACC  48 74
LK412_RS03165  634059 ..  634083 -   -20   -3.3514   ACCGACACGGCACAA          CGGGCGCCCG GGCCG CGGGCGCCCG          CCGCGATCAGTCGAT 100 32
LK412_RS03160  632725 ..  632742 -  -5.5  -2.71712   GCCTCTCGCTCAAAG             TCCCAGG ATGG CCTTGGA              AATGATGTTCTTCTG  45 2
LK412_RS03155  631414 ..  631433 -  -3.4  -3.65812   CCCCGCCGAACACAA            CGTCGGCC ACCT GTACGACG             CCAAGCCCGAACTGA  51 167
LK412_RS03140  627490 ..  627500 -  -8.2  -3.35813   GGTGATGGGAACGAA                 GCGC TCG GCGC                 CGAAGAAGTTGCCGA  60 176
LK412_RS19810 NONE
LK412_RS03130  625760 ..  625794 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS03115  622357 ..  622391 -  -8.5  -2.71364   GCAGGGCGCCAAGTA    CGCCGAGCACGCCGCC ACCC GG-GGCGTGATCAGCC     GCGAGCTCTACGCGG  52 504
LK412_RS03065 NONE
LK412_RS03060 NONE
LK412_RS03055  610617 ..  610633 - -15.1  -5.75945   ACGCCCCAAAAAAAA              GCCGCGC AGA GCGCGGC              AGGAGGAAAACGGAA 100 55
LK412_RS03050 NONE
LK412_RS03045 NONE
LK412_RS03040 NONE
LK412_RS03035 NONE
LK412_RS03030 NONE
LK412_RS03025  603709 ..  603745 -  -9.9  -3.69395   TCGACCATGGAACAA    CGCCGCGTTGGCCAGCG CCG CGCCGGCCACCGTGCTG    CGGCGGCCGCTGCCC  70 303
LK412_RS19800  602526 ..  602536 -  -5.4  -3.14344   GATTTCCTGTACCAA                 GACA TAT TGTC                 TCCTCCTAGAGAGTT  49 94
LK412_RS03015 NONE
LK412_RS03010 NONE
LK412_RS03005 NONE
LK412_RS03000 NONE
        lpdA NONE
LK412_RS02990  595594 ..  595615 -  -4.3   -2.5474   CGCGATGGAGAAGAT           CCTGCACGGC AAC GCCGAAC-GG           CTGCTGGCGCAGGCC  42 103
LK412_RS02970  590954 ..  590987 -  -7.3  -3.65902   TCGAGCGCATGTAAA     CCCCCCACCCGGG TGCCTGTC CCCGCACGGGGGA      CAGGCACCCGCTGAC  61 50
LK412_RS02960  588623 ..  588661 -   -11  -3.20723   TGTCGAGGAACTCAA  CTGCGCCACCACCGGCG TGTTCG CGCCGCTGGTGG-GCAT   CATCGGCAGCGGGCA  64 224
LK412_RS02935 NONE
        grxC NONE
        secB NONE
LK412_RS02920 NONE
LK412_RS02915  580401 ..  580438 - -13.3  -2.79183   TGCAGGTGCACGACA   CGCTGCCGCAGGCGCTGG CGG CCACCGGC-GCGGCTGCG   CCGCGCATCTTCGCG  67 293
LK412_RS02900  578237 ..  578249 -  -9.1  -4.09685   GTCCATGGCGCAAAA                CTGGC GCG GCCAG                GGCGTCCAGGACACC  72 173
LK412_RS02845 NONE
LK412_RS02840 NONE
LK412_RS02835 NONE
LK412_RS02830  562346 ..  562396 -  -8.1  -4.32857   GCTGGCAAAGACAAA GTGACACTCAGGTGCCTGTCCCC GCACG GGAGACAGGCACCTGCCGAACCC TGGGAGCCCGTCCTC  77 49
LK412_RS02795  555955 ..  555982 -  -6.2  -3.17714   CGAAATCTTCATGAA        GCTGCTGTCGAC GCTG GTCGACGCCAAC         AATCAGTACAGCCGC  50 69
LK412_RS02755  546518 ..  546530 -  -7.7  -3.61398   CCGGTTTCCCAAGAA                CGTCA ACC TGACG                GGCACGATCGCGCTG  60 299
LK412_RS02745  544919 ..  544929 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 96
LK412_RS02740  543870 ..  543880 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS02735 NONE
LK412_RS02725 NONE
LK412_RS02720  540572 ..  540614 - -14.2  -3.33696   TCCGCCTGGAATGAA CGGTGCGCGGGGCGGACGGCC TGCG GGCCG-CCGCCC--CGTACCG CATCAGTGCTTCATG  75 28
LK412_RS02705  537219 ..  537243 - -14.9  -2.90075   GGCGTTCGAACCATA          TGCCGGCGGCC TCA GGCCGCCAGCG          AAATCGATACCGGCG  73 12
LK412_RS02700  535647 ..  535661 -  -2.7  -3.72576   CCTTGCTGCAGGAAA               TCGGC CCGTT GCCGC               TGTCCGGCCAGGCCT  53 464
        kynU NONE
         def  530680 ..  530690 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS02665  529625 ..  529652 -  -3.2  -3.54424   TGGGACGGTCGGAAA        CGGGTCAGGGCGC GGC GCGCGC-GCCGCG        GACATCAAGAACGGG  49 49
         fmt  528390 ..  528404 -    -7  -2.62983   GGCAGGCCGAGATCA               GCGTCG AAC CGGCGC               TGCTGGCGCGCTTCG  48 293
LK412_RS02635  525368 ..  525395 - -19.2  -3.02324   CTGATCGAAAGCACA        GGTGCCCGTCCC TGTC GGGACAGGCACC         GAATCAACACGGCGC 100 57
LK412_RS02620  522180 ..  522221 -  -6.5  -3.11634   CCCCAGATGACGGAA CCCGTGCAGGCGCACCGATC ACA GATCGCT-CACCGGCACCGA CAGCGATTCGGCCGG  51 2
LK412_RS02615  520984 ..  521034 - -18.9   -3.6579   AAGGGATTCTAACAA CAGC-CCGCCTGGCCGGCGGCGGC GCCG GCTGCCATCGGCCAGGCGCCGCCG CCCTGTCGATCGCTC  95 39
LK412_RS02610  520089 ..  520123 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        rocD NONE
        rocF  516933 ..  516943 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 80
LK412_RS02590  515760 ..  515774 -    -7  -3.41693   CCCACCATGAACGAA               GCGGGC GTG GCCGGC               TACGCCAAATCGGGC  58 180
LK412_RS02530  499977 ..  500003 -  -2.1  -3.61178   CGGATGGATCGGAAA         TTCGGGTCAGC GGACG GCAGGCCGGAA         CGCCTGCAGCCAGGG  48 5
LK412_RS02525  498751 ..  498765 -  -2.7  -4.07568   CTGCGCCGGCGAAAA               CGGCG GCGCG CGTCG               AGCATAGCGTATTGC  59 70
LK412_RS02520  498286 ..  498310 -   -15  -4.57073   CACCCTTGTGAAAAA         CCCCGCC-GGC GCAG GCCTGGCGGGG          TTTTCATGGGTGGAC 100 49
LK412_RS02505  495813 ..  495823 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 71
LK412_RS02500 NONE
LK412_RS02495  494119 ..  494135 - -10.8  -5.10497   AACCGACGCAAAAAA              GCCCGC TCGAG GCGGGC              TGTTGAACTACGGCC 100 47
LK412_RS02490  493703 ..  493713 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS02485  492665 ..  492710 -    -6  -2.89564   TTGGTATCGGACACA GTTATCTCCTAGCCCCTACC GGGGCG GGTGGGGGTTAGGTGTGAAC TGTCAATAGGTTGTA  48 14
LK412_RS02480 NONE
LK412_RS19795  491962 ..  491982 -  -3.1  -2.73483   AGGTGAGGGGAAGCA            TGGTCAGGC CTC GTCCGACCG            TGCAGCCATGTCGCG  40 73
LK412_RS02475 NONE
LK412_RS02470 NONE
LK412_RS02465 NONE
LK412_RS02460  489750 ..  489764 - -12.8  -3.02511   GCTACGTGGGTAATA               GGGCGG GCG CCGCCC               AGGGAGATCAGGCGG  67 33
LK412_RS02455 NONE
LK412_RS02450 NONE
LK412_RS02445 NONE
LK412_RS02440  486910 ..  486920 -  -8.2  -3.54424   TGCTATCCCTCGAAA                 CCGC CAT GCGG                 TCAGGCGAGCTGCTG  63 406
LK412_RS02420  481886 ..  481914 -  -4.4  -3.44622   GACCCGCAGAACGAA        GTGCGCTGGCCG CTGAC CAACCAGCGCGG        GGAATCGGTCGAAGT  49 329
LK412_RS02405  479665 ..  479684 - -16.4    -3.767   GAGCCAGCCACGAAA            CGGCGCCC TGCG GGGCGCCG             TTTTTTTCGTCCTGG  91 219
        dnaA NONE
        dnaN  474041 ..  474054 -  -2.3  -5.03145   TAACGCCTTAAAAAA               CAGCC TCAC GGCCA                CACCGTTCGCGCGCG  79 81
        gyrB  471513 ..  471534 - -13.7   -4.4078   CGCCCCCAAGCAAAA           GAGGCTGCC TCAC GGCAGCCCC            TTTCGGCATACGACG 100 53
LK412_RS02360 NONE
LK412_RS02355  467697 ..  467751 -  -6.3  -3.76759   ATGAAGGTCAGGAAA GCGGCACGGCG-ATGGCCGGCCTTCGC GCG GCGAGAGCCAGT-ATACGCCGCCCCTC GCGCACGCCTGCAGG  62 369
LK412_RS02345  466409 ..  466459 -  -6.3  -3.44848   TCGGCGTAGTAAAGA CGGGTCTTGGGCTTCA-TGCGATC TCCAGT GAACGCAATGTAGCC-AAG-CCCG CTTTGCAGATTTTGC  55 79
LK412_RS02340  465552 ..  465565 -  -9.5  -3.26471   CTACGGCCATAGTAA               CCGGG CCGG CCCGG                GCGGGCCTGCAACGC  61 40
LK412_RS02335  464077 ..  464087 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 54
LK412_RS02330  462582 ..  462611 -  -8.7  -3.09681   GAAAACCCGACTCAA       CTTTACGTTTACG TTTA CGTAAACGTAATA        TTTGCACTGCATCAT  56 487
LK412_RS02315  460784 ..  460818 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 218
LK412_RS02290 NONE
LK412_RS02285  452176 ..  452214 -  -6.7  -3.14931   GTCACGCCGGAGCAA  GGCTGACCCGACGCCGGGC CGC GCCCGGCGTCAT-TCA-CT  TCACTTCGATCAGCG  52 21
LK412_RS02270  449371 ..  449408 -    -9  -2.70932   TCTCGCCGCCAACGA   CGAGCACGGCGTGGCGC GGGTG GAGCC-CGGCGCGCCCG   CGCCGGCGCTGGGCA  52 188
LK412_RS02260  447178 ..  447190 -  -6.2  -2.64155   CCTGGCGGAAAGGCA                GCGC GATTG GCGC                ATTGGAGTCGGGACG  46 70
LK412_RS02255  445024 ..  445053 - -20.9  -3.29144   CGACCGCGTCCAGAA       TGCACAACCCACC TTGC GGTGGGTTGTGCA        TTGCGTCGGCGCCCG 100 59
LK412_RS02250  442566 ..  442585 -  -3.4  -4.07568   CGCGGCTCTGTAAAA            GGGGGCAG TGCG CTGCGCGC             GGTCTTCACGTTTTC  59 87
LK412_RS02245  441861 ..  441896 - -16.8  -2.70525   GTTCCGGAAATCAAT    GCGATGGCGCGCCAGC ACGG GCCGGCGCGCCATGTC     TGGCGCGGCCGCATC  80 39
LK412_RS02230  435571 ..  435593 -  -5.4  -3.50853   TTGCGGCAACGATAA           CGCAACTGGC CGC GTCGGTCGCG           TGGACCGCGCGGTGC  54 102
LK412_RS02225  434459 ..  434469 -  -8.2  -2.82635   AGCTCGATCATCACA                 GGCC CCG GGCC                 TTGCGCACGAATCGC  54 10
LK412_RS02220 NONE
LK412_RS02215 NONE
LK412_RS02210  432021 ..  432042 -  -3.5  -3.64822   AGTCCTGCAGGGAAA           CGGCGCGCA GCCT CGCGGGTCG            GGCAAGCTCAGAACT  54 33
LK412_RS02205 NONE
LK412_RS02200  429268 ..  429315 -  -2.7  -3.02511   CGCATCCCGGCAAGA CCGTGG-TGTGCGTCAGCGGCGA CGCG TCGGTGCTGATGAACATCCA-GG AGTTGTCCACCGCCA  41 467
LK412_RS02190  427153 ..  427169 -  -5.7  -3.28712   CGGCCTGGCCGAGAA              CGACCTG CCG CTGGCCG              CGCTGGCGCGCGATC  52 137
LK412_RS02180  425433 ..  425463 -  -8.9  -3.21063   CAGCCAAACGCAATA      CCGCGCAGGCGCGC GAGC GCCCGTCTG-GCGG       GAAAGTGCCGGCACA  56 299
        ribB  424416 ..  424426 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 270
LK412_RS02165  423327 ..  423375 -  -9.7  -3.03159   TCAACGTGGGCAACA TCGGCGCCGACCAGCTG-GC-CGAC TAC GTGGCGCGCAGC-GGCCG-CGCCGA AGAGGACGTGCGCCG  59 62
LK412_RS02155 NONE
LK412_RS02150  416482 ..  416504 -  -8.4  -4.05714   AGGGCCAATGATAAA          GCACGCCGG GGCTGG CCGGCG-GC           GCGGGCTCAGCCGCG  72 32
LK412_RS02145 NONE
        thiD  414710 ..  414720 -  -3.2  -4.21462   ATTCATGACGGAAAA                 TCGG AAA CCAA                 TATAGGGGAGTCAAC  63 67
LK412_RS02135  413812 ..  413844 -  -5.3  -2.87132   GGCTTTCGTTATACA      GGCCGCCGGCTTCGC CCG ACAGGGCCGGCAGCA      GCCCGGCGCGGGCTT  46 201
LK412_RS02120  410805 ..  410818 -  -3.7  -2.87132   CGTCCCTGTTACAGA               TGCGC GGGC GCGCC                CGGGTCGCAGGGCGC  43 97
LK412_RS02115 NONE
LK412_RS02110  408646 ..  408677 -  -4.4  -3.72576   CGCTCGCGGACGAAA      CAGCGCGGC-C AGTGTAGCGTA GCGCCGCGCCG      CCGTGCGCCCCCCTG  55 92
         kch  407232 ..  407266 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        rpsL NONE
        rpsG NONE
        fusA NONE
         tuf  401288 ..  401313 - -11.1  -4.62203   CCTAAAGAACGAAAA         GCGAAGGCGGC GACT ACCGCCCTCAC          TGGTTGGGTACTGCT 100 41
        rpsJ  400877 ..  400916 - -20.2  -3.53091   AGCTGTCGCGCCAAA  GCAAAATGGCCGCACTCC CGGG GGAATGCGGCCATTTTTC   ACGAGCTGCGCCACA 100 63
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  395771 ..  395793 - -17.8  -5.84381   CGATGAACAAAAAAA           CGGCAAGAGC CAG GCTCTTGCCG           TTTCATGCCGGAGCG 100 70
LK412_RS19790  392832 ..  392852 -  -6.7  -3.17075   GTCGGCTTAATCCAA            CGCCCACGG CCG CGGCAGGCG            GCGCACTGATGTGGC  52 88
        rplN NONE
        rplX  391685 ..  391696 -  -4.4  -2.90992   AACTCTTGCAAACGA                GACA TGTC TGTC                 GCCCCTTACGCCTTG  44 31
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        infA NONE
        rpmJ  386581 ..  386600 -  -2.8  -3.08812   GTTCCTTGAATAAAT            CCGTT-GCG TAC CGCTAACTG            GGTTAGCCTTGACGC  44 28
        rpsM NONE
        rpsK  385786 ..  385801 -  -4.6  -2.87344   GATTCCCTTTAGATA              CGACGA CGCT TCGGCG               GACGGCAGCCGTTGT  44 3
        rpsD  385042 ..  385071 - -14.3  -3.59979   CGTTTCTACCGCAAA       GCCCGCCC-CGCCA AAA TGGCGAAAGCGGGC       TGGCGCGGGTGAGGC  78 98
        rpoA  383905 ..  383933 - -21.7  -2.84218   GATGCATGAAAACAT        CGCGGCGGGCGCA TGG CGCGCCCACCGCG        CTTGACTGCTTACGG 100 35
        rplQ  383339 ..  383368 - -23.7  -4.56597   CGCGCGCCGCAAAAA       GCAAGGGCGGGTC CGAA GACCCGCCCTTGC        CGCTTTCCGCGCTGC 100 46
LK412_RS01910 NONE
        dsbD  380453 ..  380506 -  -3.1  -3.04144   CTGGTATGGGCAACA TCGTACCAGCCTCTCGCCCACGCCA TCGCCT CGG-GCGCGCCCGAGGC-GATACGA AGCAACGTCAGGAGC  42 33
LK412_RS01900  379244 ..  379254 -  -8.2  -2.70932   GCGCCGGGTCAAGGA                 CGCG TTC CGCG                 TGCCGACCTTCGCCT  52 207
LK412_RS01885  376765 ..  376791 -  -6.4  -5.14563   GCGTTCATGAAAAAA         GGGGGGCCGC GCAATCG GCTTCCCCCC         CCTCATAGACAACGG  90 112
LK412_RS01880 NONE
        ccsB  373272 ..  373301 - -22.3  -3.54459   GCAAGGCCTGCCAAA       GACAATGCCCCGC ATCT GCGGGGCATTGTC        TTTGAAGGGCGGCGC 100 44
        cyaY  370876 ..  370929 - -17.3  -2.80816   TCGTCATGGACGATA TGCTGCGTGGCGTGGCCACCAGCGGC ACC GCCGCCCGCGCCCGCGCCACGCT-CA AGCGCAGCGACGTCG  78 513
LK412_RS01850 NONE
        aroB NONE
LK412_RS01840  365790 ..  365845 - -14.6  -5.14965   ACGCGGACGAAAAAA TCCGCCGGCCCCGTTGCCGT-CAGCAG ATG CCCCTGGACTGCCGCGGAGCCGGCGAA TAAAAGCACGGCGAA 100 120
LK412_RS01825  360718 ..  360736 -   -16  -3.44848   CGGCTTCATGAAACA             CGCCGGTC GGT GACCGGCG             CATACTGGGTGAAGC  82 142
         ssb  360073 ..  360088 - -10.4  -5.78622   CCAGGCGAAAAAAAA              CCCTGC CTGG GCAGGG               CTTTCGCATCCAGCG 100 57
LK412_RS01815 NONE
LK412_RS01810  356774 ..  356787 -  -3.7  -3.65351   CCATGGCGATGGAAA               GGTCG CTCG CGCCC                ACGTAGATCGCGCCC  54 462
LK412_RS01795 NONE
LK412_RS01790  354323 ..  354365 -  -7.4  -2.79796   GCGTATTGCAGGACA CCCTGCAACGCCTGGGCGTG ACG CGCGACGTGGCGGTGCAGGT GCCCCATATGCTGGC  49 284
LK412_RS01780 NONE
LK412_RS01775  350749 ..  350779 -  -3.2  -2.63301   GACATTCTGAGAGTA       GCAGTGTGAATGTA GTA CATAGACACACTGC       TGGCAGGAAAGATCC  39 137
LK412_RS01770 NONE
LK412_RS01765  348711 ..  348734 - -17.4  -3.28712   GCGTGCGGGCGACAA          GCGGCCGGCC TTGC GGCCAGCCGC           GCCCCGCTGCGGGGC  86 59
LK412_RS01760 NONE
LK412_RS01755  346569 ..  346592 - -17.4  -3.97331   AATCCAGGCAAAGAA          CCGGCGGGCA GCCT CGCCCGCCGG           CAGGACAATCGTGTC  95 44
LK412_RS01750 NONE
LK412_RS01745 NONE
LK412_RS01740  343378 ..  343395 -  -9.9  -3.72576   TTTTTTTCGATTAAA             TTCGCAC GTCC GTGCGAA              AAGAGGAAATCATGA  70 284
LK412_RS01700  334812 ..  334827 -  -4.6  -2.53382   AGTAGGCGCAATCTA              CCCAGC GCCG GCCAGG               CTTGTCAATCGGCGG  42 30
LK412_RS01695  333665 ..  333703 - -10.9  -3.73224   CGATGGGGTACGAAA  CCCCTG-CGACGGCGGCC ATGC GGCCGCCGCCTTCAAGCG   AGGTATGCGCCCGCT  73 39
LK412_RS01665  328742 ..  328761 -  -4.8  -3.35679   TTCGTGGATGGAGAA            GGCCGGCG GCGC CTCAGGCC             GCTCCTTCGGCCAGG  51 19
LK412_RS01655 NONE
LK412_RS01650  325563 ..  325602 - -13.5  -2.78715   AAGTTGCGCATTATA GCGCCCAGCGGCGCCGCGC GCAC GCGCGGCGG-GC-GGGCGA  TCGCGCAGCCTCAGT  67 36
LK412_RS01645  324962 ..  324989 -  -8.4  -3.06831   TCAACGTTCACGCAA        GCGCGGATGGCGT TCG ACACCA-CGGCGC        CACTCGAGGAGGTCT  55 477
LK412_RS01630  322958 ..  322989 -   -13  -2.89668   CAAGAGCGGGATACA      GATGGACTGAGCGC GCCG GCGCTCAGTCGGTC       AGCTGGTCGGGGATG  69 16
LK412_RS01575  311282 ..  311294 -  -5.5  -3.55622   TCGAAGTCGGCGAAA                GCATC GAG GACGC                GGTGCACCGCGAGGT  54 315
LK412_RS01550  306382 ..  306394 -  -6.9   -3.7456   CTACACCAAGAAATA                CGGCA AGC CGCCG                GCCACGTTCTCGGGC  61 272
LK412_RS01505  297004 ..  297019 - -10.4  -2.57132   CCCGCCGCCTAGAAT              TGCCGC GCCA GCGGCA               GTTTGCTGCCGGCGA  57 3
        nadC  295945 ..  295955 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS01495  294742 ..  294761 -  -5.6  -3.90112   GCGGCCTGAAGGAAA            GCC-TGGCC GAC GGCCGCGGC            GTCCTGTGCGCCGTG  60 205
LK412_RS01460  287482 ..  287505 -  -9.4   -3.1372   TACTGGCCACCAATA          CCGCCGGCGC CGAA GCGCTGGCGC           ACGACATCAAGGCCT  59 220
LK412_RS01430  283237 ..  283254 - -12.7  -3.21218   AGCCTTGACGACGAA             TGCCCCC GCAA GGGGGCA              TTCGTTCGCCGGCAG  69 86
LK412_RS01400  277757 ..  277799 -   -14  -3.23853   GGTGTGGAAGCAATA CTCGCAAGCCGCGGCGGCGG CCG CCGCCAGCACGGCCTCGGAG GATTCGGCGCCGGCG  75 147
LK412_RS01390  273865 ..  273912 -  -6.1  -4.63218   CGGCGCTGAAGAAAA TGCGCGGTGCGCTGACCCCCGCC TGAC GCCGTACG-CGGCGC-CCGCGCA TGCAAGACAGACCGC  78 397
LK412_RS01365  269147 ..  269176 -   -15  -4.25104   GCGGGCGCAGCAAAA       TGCCCACGCGGC ACAGGG GCCGGGTGGGCA        GCATGCAACGCCCCG  95 55
LK412_RS01360 NONE
LK412_RS01355  262559 ..  262571 -  -9.1  -3.18264   TGCCGTACGTACTAA                GACGG TAT CCGTC                CCCGCGGGGACAGGC  59 101
LK412_RS01350  261723 ..  261737 -  -7.8  -3.28712   GCGGGCGCCTCAGAA               GCGGTA GCC CACCGC               CACGGTGGCGACCCA  56 5
LK412_RS01345  260512 ..  260542 - -10.3  -4.11692   TAGGCAGCGGTAAAA      GGTTGGGGGCCGCC CACG GGCGGCCCGCG-CC       GGGCGAAACGGCCAT  78 135
LK412_RS01340 NONE
        mlaE NONE
        mlaD NONE
LK412_RS01325  257431 ..  257449 -  -5.2  -4.72386   GAAACGATGGAAAAA             CGCATGAA ATC TCCTTGCG             AATCGGGCGGTGGCC  81 45
LK412_RS01320  256641 ..  256652 -  -5.8  -4.07568   CCGGCTGGCCGAAAA                GCTG CTTC CAGC                 CGCGCCGGCGCGGCT  64 185
LK412_RS01295 NONE
        murA NONE
        hisG  251819 ..  251840 - -18.7  -2.61274   GGTACTGCAAGGAAG           GCCGCCCGC CGGC GCGGGCGGC            GGGGTTCAGGCGATG  87 31
        hisD NONE
        hisC NONE
        hisB  248816 ..  248830 -  -4.9  -2.62184   CGGGGCGTTACAGCA               CGCCC TTGGT GGACG               GCACGGCATCGCCCA  42 3
        hisH  248073 ..  248085 - -10.5  -2.60615   AGTCGTTGGAAATAT                CGGCC CAA GGCCG                TCGCGACAGGCGTTT  57 39
        hisA NONE
        hisF NONE
        hisI NONE
LK412_RS01245 NONE
LK412_RS01240  245364 ..  245379 -  -2.4  -2.90496   GGTTCTCCGAAATTA              TGCGGC GGGA GCCACG               CGGCCTTTCCAGGGA  40 7
        tatA  245082 ..  245107 - -12.6    -3.889   TGGAACGATAGGAAA         GGACCGGCGCC GTCAT GG-GCCGGTCC         CGGGCCGGGACTAGG  81 36
        tatB NONE
        tatC  243682 ..  243709 -  -2.6  -3.53012   GGTTCTGGCTGGAAA        TTCCGCGCCATCG CAT CAA-GGCGCGCAG        ACGGTCTGCTTGGCT  48 121
LK412_RS01205  241958 ..  242001 - -11.6  -2.52516   TTTTGTACGACGAAT CTGCACGCATGCGCGTTGGC GGTT GCCAACACGTATGCGGGATG GTGCCGGCCGGACGG  61 67
        ptxA NONE
        ptxB NONE
        ptxD NONE
        ptxE  239408 ..  239418 -  -3.2  -3.63968   GCGGAAACGTCGAAA                 CCTC CGG AAGG                 GTTCATTCGCAATAT  53 28
        ptxC  238641 ..  238659 -  -6.6  -3.09785   GGACAGGCGAACAGA             TCCGAGCC GGC GGCTCAGC             ATATCGACGCTGCCG  51 21
        ptlA NONE
        ptlB NONE
        ptlC NONE
        ptlD NONE
        ptlI NONE
        ptlE NONE
        ptlF NONE
        ptlG NONE
        ptlH  230266 ..  230276 -  -2.4  -4.29396   AATTATGCACGAAAA                 TCGC AAT GCGT                 GCAGGCGGCAGGCGT  62 40
LK412_RS01130  230126 ..  230147 - -15.9   -4.7497   GGCAGGCAGCAAAAA           GCCCGGTTC GCAT GAACCGGGC            TTTCTGGAATCTGGC 100 37
LK412_RS01120 NONE
LK412_RS01115 NONE
LK412_RS01110 NONE
LK412_RS01105  224724 ..  224756 -  -5.4  -3.02043   AAGGCGGTGGGAAGA      TTGCGGCGCGGCGC GATGG ACGCCGGTGCGCAA      AGCAAGCAGGCACAT  47 209
LK412_RS01100 NONE
LK412_RS01095 NONE
LK412_RS01090  220932 ..  220965 -  -5.2  -3.71873   CCAGCGACAGCGAAA    CGCCGTCGACGGCCAC CAGC GTG-CCG-CGCCGGCT     CGGGAATTCGATGCG  57 75
        argJ NONE
LK412_RS01070 NONE
LK412_RS01065  216242 ..  216261 -    -2  -2.89475   TATTGAGACATCACA            CCTAGCGC CGTT GCGTCAGA             GCAGCCCGCGGATCC  40 21
LK412_RS01060  215161 ..  215171 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS01055  213962 ..  213983 -  -3.7  -2.70932   CCTGGCGCGCAACCA           GTACGAGCAG GGG CTGATCG-AC           TACCTGAGCGTGGCG  40 199
LK412_RS01015 NONE
LK412_RS00990 NONE
        glpK  196066 ..  196102 -  -2.2  -3.53811   TGCATGGCGCGCAAA   GCC-TGGTGCTGCGCC GCCAGCT GGC-CAGCCCCGCGGC   CGGCGCGCCGGCGTG  50 138
LK412_RS00950  189368 ..  189384 -  -2.2  -2.70932   GTGTTGTCGCAACCA              GGCC TTCATGCTT GGCC              TCCGTGCGTGTCGTG  38 14
LK412_RS00945  188464 ..  188477 -  -2.3  -2.76696   TTTCGGCGGAACAAG               GGGCT TAAA AGCGC                GTACTGCGGGTCACT  38 16
        cheD  187309 ..  187354 -  -6.2  -3.18264   GCGCTGATCGAGCAA TACCGCGA-GCAGC-TGGGC GCGATCCT GCCCAAGCTGAACCGCGGCA ACCTGGAGCACGCCG  50 280
        mutY  182601 ..  182611 -  -3.2  -3.28924   CAGCGGGCGGCAGAA                 CCTG CAG CAGA                 TCACCTTCAGGCTGG  47 95
LK412_RS00915  180869 ..  180879 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 144
LK412_RS00910 NONE
LK412_RS00905 NONE
LK412_RS00900 NONE
LK412_RS00895 NONE
LK412_RS00890 NONE
LK412_RS00885 NONE
LK412_RS00880  173732 ..  173751 - -16.4  -6.06723   CGCGCGAAAAAAAAA            CCGCCCCG GTTG CGGGGCGG             CGTGCACGCTCGGCC 100 57
LK412_RS00870 NONE
LK412_RS00865  171006 ..  171031 -  -5.9  -3.61652   TGCGTAAACAATCAA         TCGGCGGCGGG CCAG CCGGACGCCGG          CATCGCCTTTCCGTC  56 53
LK412_RS00860 NONE
LK412_RS00855  168667 ..  168683 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
LK412_RS00845  166553 ..  166572 -  -2.8  -4.07568   CCTGGCTGTGGAAAA            CCTG-GTGT TCG ACACGCTGG            AGCGCGTGACGGTGC  58 124
        mnmE  154120 ..  154138 -  -6.7  -2.62184   GGCTGCGCGATAGCA            GGCCGCAC GATC GTG-GGCC             GCATCGCCGGCGCGG  47 398
LK412_RS00780 NONE
LK412_RS00775  150541 ..  150555 -  -5.7  -3.06183   TGGATGGCCATGGAA               CGATC GCGCA GATCG               CAGGCCAACGGATGA  47 74
LK412_RS00770  149440 ..  149472 - -18.4  -3.02144   GCACCGTTGGGAAGA     TGCGCGG-CGGCGGC GCAT GCCGCCGGCCGCGCG      ATCGGTTTACTTCTT  90 32
LK412_RS00765 NONE
LK412_RS00760  147375 ..  147396 - -15.9  -5.06414   TGCGCCCAAGAAAAA           TGCCGCGGT GCGA ACCGCGGCA            TTTTTCAATCGGCCG 100 46
LK412_RS00750  145484 ..  145524 - -16.9  -4.13767   GCGGCGATGGCAAAA  GCAACAACGCCCCAGAAGC TAT GTTCCTGGGGCGTTGTAAC  CAGGCACTTGGGCCT 100 70
        mnmG NONE
        rsmG NONE
LK412_RS00735  140428 ..  140451 -  -6.8  -2.96979   GGAACAGCAAGCACA          GCTGGCATCGA GGT TCAAT-CCAGC          TCTTTGACGCGTTCT  51 16
LK412_RS00730 NONE
LK412_RS00725  138604 ..  138635 -  -3.6  -3.14344   CACGGCCGCCAGCAA      CTGCCCGACGCCG TACGAGC CGGCG-CGGTAAG      CGCCGCTGGCCGCGT  45 103
LK412_RS00715  137411 ..  137432 -  -7.3  -4.09685   CCTTACGTTGCAAAA           TCCAGGC-CG AAC CGCACCTGGA           TTTCGTCTTGCTGAG  67 116
LK412_RS00710 NONE
LK412_RS00705  137165 ..  137177 -  -2.7  -3.65046   TTCTGACTTGAAGAA                GAACT TAG AATTC                GATGGTGCCCATGAC  53 28
         tuf  135885 ..  135919 - -18.1  -3.72893   TACTTTTCCAGCAAA    CATGGATAGAG-GGCC ATCC GGCCCCTCTATCCATG     GGAAAACCGCGCCTT  93 39
LK412_RS00695 NONE
        secE NONE
        nusG  134771 ..  134789 -  -4.5  -4.07568   CCCGGGGTTTGAAAA             TCAGGTC TTTTC GACCTGG             CTGAAATCGAGTTCG  62 7
        rplK NONE
        rplA  133524 ..  133545 - -14.5  -2.62184   CGGTCTTTGACAGCA           GCATCCGGA CAAG TCCGGATGC            GGCCCAAAGTTCTAT  71 55
        rplJ  132789 ..  132802 -  -2.3  -3.05384   TTGTCGTTCAGCGAA               TTCCG GACG CGGAG                CCTGATCAGGCCGCC  41 31
        rplL  132296 ..  132328 - -17.7  -4.35524   CCTGGAAACGCAAAA      GCCCGGGGACGGC TAAGAGC GCTGTCCCCGGGC      GTCGACGCGAGGTCT 100 40
        rpoB NONE
        rpoC  123746 ..  123769 - -16.8   -4.4078   CCGCGTCAAGCAAAA          GGCCGCTGAT ATGC ATCAGCGGCC           TTTTTTTGGCTGTCG 100 83
LK412_RS00645  121671 ..  121695 -  -3.4  -3.02144   TTACGCGCGTCAACA          CCGCCGGCTC GAACG AAGTAGGCGG          CGCTGGCCTGGGGCT  42 228
LK412_RS00625  116359 ..  116393 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS00590 NONE
LK412_RS00585  109334 ..  109391 - -16.7  -3.53224   TAGTCGGCCCGCAAA GCG-GCCCGGGCCGCGGGGCCGTGCCGG GCG CCGGCCCGGCGTCATGGCGCGGGTTCGC ACAGCGCCATCAGGT  86 9
LK412_RS00580  108224 ..  108234 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
LK412_RS00575 NONE
        glyQ NONE
        glyS NONE
        gmhB  102183 ..  102201 -  -2.2  -2.53015   ACAGCGCCGAACGCA             GCCAGGCC ATG GATCAGGC             CTCCTGCAGCAGTTG  37 20
LK412_RS00550 NONE
LK412_RS00545  100560 ..  100585 -  -5.9  -3.74693   CGTCATCGTAGCAAA         TCGGCCGCGCC AGCC GGCGCGGGCTC          AGAACTGCGGCAGGG  59 24
        gloA NONE
         def   99186 ..   99196 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  57 407
LK412_RS00525   97686 ..   97698 -  -6.2  -2.71144   CAGCCTGGCCAATTA                CGCC TGGCC GGCG                GCCCCGGGCGTGGCC  47 509
LK412_RS00515   96745 ..   96757 -  -6.2  -3.96531   TCAGATATGGATAAA                CGGC TTGAT GCCG                CCACGAATCGAGACT  64 315
LK412_RS00505   95285 ..   95323 - -10.9  -3.14132   GCTGCTGGGCACCAA  CCCG-GTCGCGGCGGC CTTCCCGC GCCGCCGCGCCGCTGG   AGATCAACCTGGCCC  64 520
LK412_RS00495 NONE
        metW   92708 ..   92718 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 97
LK412_RS00485   91683 ..   91698 -  -3.2  -2.70932   TCTCCCGTGGAACGA              CCGG TAGGCGCG CCGG               TCCTGCTAGCTGTGA  40 31
LK412_RS00480   90344 ..   90359 -  -7.5  -3.14527   GAATTGTTATCAATA              CCGCC ACTGCG GGCGG               CTTGCGCGGGTAGCG  54 71
LK412_RS00440   83283 ..   83304 -  -6.6  -2.71364   TGACTCGCGTAACCA           TGGCTGGCG TCTGT CGCCAGC-A           TTCGACCTCAATCCG  46 452
LK412_RS00375   72716 ..   72726 -  -4.6  -3.07013   CACTGGGTCAATACA                 GCCG TTG CGAC                 ATGCGTCCATGCTTG  45 59
LK412_RS00370   72118 ..   72128 -  -4.6  -3.10464   CCATCAACTGGAACA                 CGCG CTG CACG                 GTGTTCTTGTTGAAT  47 249
        htpG   69202 ..   69234 -  -6.8  -4.08767   GCCAGCCTGCCAAAA      CGGTGTCAGCCCCC CGCGC GGGGACAGCCACCC      CTTGATCGAGCGCAT  67 43
         ffh   64958 ..   64992 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
LK412_RS00320   62988 ..   63004 -  -2.1  -4.07568   GCGGCCCGGGGAAAA              GCTGTAC GAA GAACTGC              TGATCGGGGAAGACT  58 213
        waaC   49798 ..   49824 -  -7.8  -2.89683   ACGCCAGGGTATAGA         CGCCGCGGCCCA TGT CAGGCCGCCGCC         AGGGCCTGCTCGACC  52 13
LK412_RS00250   48512 ..   48522 -  -8.2  -3.14132   TGCGGCCCTGACGAA                 CCGC ACG GCGG                 GCTATCCCAGCCAAT  56 27
LK412_RS00230 NONE
LK412_RS00225   44224 ..   44238 -  -4.2  -5.01732   AAGCGCTGGAAAAAA               CCCG GCCGCAG CGGG               ATGGTGGCCGGCATG  81 404
LK412_RS00215 NONE
LK412_RS00210   42373 ..   42386 -  -2.4  -3.51934   TTGCGCTTACAAACA               TGCA ACGTGA TGCA                ACGCGGGCCGGGTCA  48 38
LK412_RS00205   40952 ..   40992 -  -9.6  -2.85351   TCCTTGGAGAGGATA GGGGCGGGCATGGCAGC-CC ACC GGTGCCGCCGCGCC-GCCTC CGGCGCGGCTTTCAT  56 43
LK412_RS00200   40028 ..   40053 - -13.2  -3.61178   GCGAGGGACGCGAAA         CGCGGGCGGC GCCAGG GCCGCCCGCC          TGCCGGCCGCTACAG  77 35
LK412_RS00195 NONE
        lipB   38996 ..   39018 - -12.7  -3.31792   TGAGCACCTTCACAA           CCGGAACGC CAGGC GCGCTCCGG           TTCGAGACAAAAAAG  71 49
        lipA   37923 ..   37943 - -12.5  -2.60496   CTGTCGGTGAAAGAC            CGCCAGGGC GTG GCGCTGGCG            CGGGCCGATACCTAT  64 61
        metC   32278 ..   32297 - -10.7  -3.89346   CCCCGACGCCACAAA            GCCTCCG TCCATG CGGAGGC             TTTGTCGTTGATGGG  77 53
LK412_RS00135 NONE
LK412_RS00130   28031 ..   28059 -    -6  -3.78419   GGAGGAAAGATACAA        GGCACCGG AGGTCGGATTTGG CCGGTGCC        AGTCCCCCTGCGGAC  62 100
LK412_RS00125   26764 ..   26779 -  -5.4  -2.72991   GGATACGCTGAAGGA              GGAC-GG GTG CCTGTCC              CCGGATGGAGCATGG  45 81
LK412_RS00060   14026 ..   14068 -  -5.5   -3.1247   ATCTTCGACAGCGAA TAC-CTGGCGCAGCAGCAGC CCTG GCAGCTGGTCCGCCACCGTA TCGACGGCGATCCGT  47 466
        rpoN   10194 ..   10209 -  -6.2  -4.30833   GAAATCAGGAACAAA              TTAGGA GGCG TCCTAA               CGACCCGCGGCGTGG  73 22
LK412_RS00040    9766 ..    9797 - -16.6  -3.96148   TGTGGGGACGATAAA      TTGCGCCAGGCAGC ATGA GCCGGCTGGCGCAA       GGCGCCGCGTCGCTC  93 39
