locus-tag class description LK428_RS00010 PF00453 Ribosomal protein L20 LK428_RS00015 PF01632 Ribosomal protein L35 LK428_RS00030 PF13609 Gram-negative porin LK428_RS00035 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LK428_RS00040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LK428_RS00045 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LK428_RS00050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LK428_RS00060 PF10531 SLBB domain LK428_RS00060 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LK428_RS00060 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LK428_RS00065 PF00384 Molybdopterin oxidoreductase LK428_RS00065 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LK428_RS00065 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LK428_RS00070 PF00146 NADH dehydrogenase LK428_RS00075 PF12838 4Fe-4S dicluster domain LK428_RS00080 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LK428_RS00085 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LK428_RS00090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LK428_RS00090 PF00361 Proton-conducting membrane transporter LK428_RS00095 PF00361 Proton-conducting membrane transporter LK428_RS00095 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LK428_RS00100 PF00361 Proton-conducting membrane transporter LK428_RS00115 PF00593 TonB dependent receptor LK428_RS00115 PF07715 TonB-dependent Receptor Plug Domain LK428_RS00130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS00130 PF00205 Thiamine pyrophosphate enzyme, central domain LK428_RS00130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS00135 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS00140 PF03466 LysR substrate binding domain LK428_RS00150 PF17757 UvrB interaction domain LK428_RS00150 PF03461 TRCF domain LK428_RS00150 PF02559 CarD-like/TRCF domain LK428_RS00150 PF00271 Helicase conserved C-terminal domain LK428_RS00150 PF00270 DEAD/DEAH box helicase LK428_RS00155 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LK428_RS00160 PF02542 YgbB family LK428_RS00170 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LK428_RS00175 PF11940 Domain of unknown function (DUF3458) Ig-like fold LK428_RS00175 PF01433 Peptidase family M1 domain LK428_RS00175 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LK428_RS00195 PF00206 Lyase LK428_RS00195 PF14698 Argininosuccinate lyase C-terminal LK428_RS00200 PF00924 Mechanosensitive ion channel LK428_RS00205 PF00795 Carbon-nitrogen hydrolase LK428_RS00205 PF02540 NAD synthase LK428_RS00210 PF00543 Nitrogen regulatory protein P-II LK428_RS00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS00235 PF03466 LysR substrate binding domain LK428_RS00245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS00255 PF12911 N-terminal TM domain of oligopeptide transport permease C LK428_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS00260 PF03193 RsgA GTPase LK428_RS00265 PF01435 Peptidase family M48 LK428_RS00270 PF00929 Exonuclease LK428_RS00275 PF03853 YjeF-related protein N-terminus LK428_RS00280 PF07848 PaaX-like protein LK428_RS00280 PF08223 PaaX-like protein C-terminal domain LK428_RS00285 PF05138 Phenylacetic acid catabolic protein LK428_RS00290 PF06243 Phenylacetic acid degradation B LK428_RS00295 PF05138 Phenylacetic acid catabolic protein LK428_RS00300 PF01883 Iron-sulfur cluster assembly protein LK428_RS00310 PF00970 Oxidoreductase FAD-binding domain LK428_RS00310 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS00310 PF00175 Oxidoreductase NAD-binding domain LK428_RS00315 PF00171 Aldehyde dehydrogenase family LK428_RS00320 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS00325 PF03061 Thioesterase superfamily LK428_RS00330 PF00501 AMP-binding enzyme LK428_RS00330 PF14535 AMP-binding enzyme C-terminal domain LK428_RS00335 PF16970 Type-1 fimbrial protein, A LK428_RS00345 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS00350 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LK428_RS00350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS00355 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LK428_RS00360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LK428_RS00360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LK428_RS00360 PF02769 AIR synthase related protein, C-terminal domain LK428_RS00365 PF05860 haemagglutination activity domain LK428_RS00365 PF13332 Hemagglutinin repeat LK428_RS00365 PF13018 Extended Signal Peptide of Type V secretion system LK428_RS00365 PF05594 Haemagluttinin repeat LK428_RS00380 PF01925 Sulfite exporter TauE/SafE LK428_RS00385 PF13098 Thioredoxin-like domain LK428_RS00405 PF03120 NAD-dependent DNA ligase OB-fold domain LK428_RS00405 PF01653 NAD-dependent DNA ligase adenylation domain LK428_RS00405 PF12826 Helix-hairpin-helix motif LK428_RS00405 PF00533 BRCA1 C Terminus (BRCT) domain LK428_RS00405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LK428_RS00430 PF01636 Phosphotransferase enzyme family LK428_RS00435 PF01207 Dihydrouridine synthase (Dus) LK428_RS00455 PF03631 Virulence factor BrkB LK428_RS00465 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LK428_RS00470 PF00072 Response regulator receiver domain LK428_RS00470 PF00486 Transcriptional regulatory protein, C terminal LK428_RS00475 PF07689 KaiB domain LK428_RS00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS00475 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS00490 PF01336 OB-fold nucleic acid binding domain LK428_RS00490 PF00152 tRNA synthetases class II (D, K and N) LK428_RS00495 PF00106 short chain dehydrogenase LK428_RS00505 PF02272 DHHA1 domain LK428_RS00505 PF01368 DHH family LK428_RS00505 PF17768 RecJ OB domain LK428_RS00515 PF02687 FtsX-like permease family LK428_RS00515 PF12704 MacB-like periplasmic core domain LK428_RS00520 PF00005 ABC transporter LK428_RS00525 PF01026 TatD related DNase LK428_RS00540 PF00753 Metallo-beta-lactamase superfamily LK428_RS00540 PF13567 Domain of unknown function (DUF4131) LK428_RS00540 PF03772 Competence protein LK428_RS00550 PF02811 PHP domain LK428_RS00555 PF01272 Transcription elongation factor, GreA/GreB, C-term LK428_RS00555 PF03449 Transcription elongation factor, N-terminal LK428_RS00575 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS00595 PF13416 Bacterial extracellular solute-binding protein LK428_RS00600 PF00005 ABC transporter LK428_RS00600 PF08402 TOBE domain LK428_RS00605 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS00610 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS00620 PF02245 Methylpurine-DNA glycosylase (MPG) LK428_RS00630 PF02646 RmuC family LK428_RS00635 PF18158 Adaptive response protein AidB N-terminal domain LK428_RS00635 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS00635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS00640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LK428_RS00645 PF01895 PhoU domain LK428_RS00650 PF04185 Phosphoesterase family LK428_RS00650 PF05506 Domain of unknown function (DUF756) LK428_RS00655 PF04362 Bacterial Fe(2+) trafficking LK428_RS00660 PF00696 Amino acid kinase family LK428_RS00660 PF00583 Acetyltransferase (GNAT) family LK428_RS00665 PF00271 Helicase conserved C-terminal domain LK428_RS00665 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LK428_RS00665 PF04408 Helicase associated domain (HA2) LK428_RS00665 PF00270 DEAD/DEAH box helicase LK428_RS00665 PF11898 Domain of unknown function (DUF3418) LK428_RS00675 PF14579 Helix-hairpin-helix motif LK428_RS00675 PF02811 PHP domain LK428_RS00675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LK428_RS00675 PF01336 OB-fold nucleic acid binding domain LK428_RS00675 PF07733 Bacterial DNA polymerase III alpha NTPase domain LK428_RS00680 PF13439 Glycosyltransferase Family 4 LK428_RS00680 PF00534 Glycosyl transferases group 1 LK428_RS00685 PF01522 Polysaccharide deacetylase LK428_RS00690 PF00535 Glycosyl transferase family 2 LK428_RS00695 PF00534 Glycosyl transferases group 1 LK428_RS00695 PF13439 Glycosyltransferase Family 4 LK428_RS00700 PF00884 Sulfatase LK428_RS00710 PF00005 ABC transporter LK428_RS00715 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS00720 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS00730 PF01312 FlhB HrpN YscU SpaS Family LK428_RS00750 PF04316 Anti-sigma-28 factor, FlgM LK428_RS00760 PF00460 Flagella basal body rod protein LK428_RS00765 PF00460 Flagella basal body rod protein LK428_RS00765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK428_RS00770 PF03963 Flagellar hook capping protein - N-terminal region LK428_RS00770 PF13861 FlgD Tudor-like domain LK428_RS00770 PF13860 FlgD Ig-like domain LK428_RS00775 PF07559 Flagellar basal body protein FlaE LK428_RS00775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK428_RS00775 PF00460 Flagella basal body rod protein LK428_RS00780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK428_RS00780 PF00460 Flagella basal body rod protein LK428_RS00785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK428_RS00785 PF00460 Flagella basal body rod protein LK428_RS00790 PF02107 Flagellar L-ring protein LK428_RS00795 PF02119 Flagellar P-ring protein LK428_RS00800 PF10135 Rod binding protein LK428_RS00800 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LK428_RS00805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK428_RS00805 PF00460 Flagella basal body rod protein LK428_RS00810 PF00669 Bacterial flagellin N-terminal helical region LK428_RS00815 PF00672 HAMP domain LK428_RS00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK428_RS00815 PF02203 Tar ligand binding domain homologue LK428_RS00820 PF02203 Tar ligand binding domain homologue LK428_RS00820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK428_RS00820 PF00672 HAMP domain LK428_RS00825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK428_RS00825 PF08447 PAS fold LK428_RS00845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS00845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS00850 PF01425 Amidase LK428_RS00860 PF00171 Aldehyde dehydrogenase family LK428_RS00875 PF08264 Anticodon-binding domain of tRNA LK428_RS00875 PF00133 tRNA synthetases class I (I, L, M and V) LK428_RS00875 PF13603 Leucyl-tRNA synthetase, Domain 2 LK428_RS00875 PF09334 tRNA synthetases class I (M) LK428_RS00880 PF07690 Major Facilitator Superfamily LK428_RS00885 PF01047 MarR family LK428_RS00905 PF00916 Sulfate permease family LK428_RS00905 PF01740 STAS domain LK428_RS00910 PF00471 Ribosomal protein L33 LK428_RS00915 PF00830 Ribosomal L28 family LK428_RS00920 PF07690 Major Facilitator Superfamily LK428_RS00940 PF00005 ABC transporter LK428_RS00945 PF00440 Bacterial regulatory proteins, tetR family LK428_RS00950 PF01614 Bacterial transcriptional regulator LK428_RS00950 PF09339 IclR helix-turn-helix domain LK428_RS00955 PF02515 CoA-transferase family III LK428_RS00965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LK428_RS00965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LK428_RS00975 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS00985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS00985 PF03466 LysR substrate binding domain LK428_RS00990 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01005 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS01010 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS01015 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS01015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS01020 PF02803 Thiolase, C-terminal domain LK428_RS01020 PF00108 Thiolase, N-terminal domain LK428_RS01025 PF00465 Iron-containing alcohol dehydrogenase LK428_RS01030 PF03061 Thioesterase superfamily LK428_RS01035 PF01266 FAD dependent oxidoreductase LK428_RS01040 PF01494 FAD binding domain LK428_RS01045 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS01050 PF03466 LysR substrate binding domain LK428_RS01065 PF03358 NADPH-dependent FMN reductase LK428_RS01090 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS01100 PF03466 LysR substrate binding domain LK428_RS01120 PF00361 Proton-conducting membrane transporter LK428_RS01120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LK428_RS01120 PF13244 Domain of unknown function (DUF4040) LK428_RS01120 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LK428_RS01125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LK428_RS01130 PF00361 Proton-conducting membrane transporter LK428_RS01135 PF01899 Na+/H+ ion antiporter subunit LK428_RS01140 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LK428_RS01170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK428_RS01175 PF17676 LD-carboxypeptidase C-terminal domain LK428_RS01175 PF02016 LD-carboxypeptidase N-terminal domain LK428_RS01180 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS01185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS01195 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS01200 PF00005 ABC transporter LK428_RS01200 PF12848 ABC transporter LK428_RS01205 PF00005 ABC transporter LK428_RS01230 PF01205 Uncharacterized protein family UPF0029 LK428_RS01235 PF00085 Thioredoxin LK428_RS01245 PF00860 Permease family LK428_RS01250 PF00814 Glycoprotease family LK428_RS01265 PF02660 Glycerol-3-phosphate acyltransferase LK428_RS01270 PF01975 Survival protein SurE LK428_RS01280 PF01551 Peptidase family M23 LK428_RS01280 PF01476 LysM domain LK428_RS01300 PF05958 tRNA (Uracil-5-)-methyltransferase LK428_RS01305 PF09278 MerR, DNA binding LK428_RS01305 PF00376 MerR family regulatory protein LK428_RS01315 PF08534 Redoxin LK428_RS01315 PF00462 Glutaredoxin LK428_RS01320 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS01320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK428_RS01325 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LK428_RS01330 PF03009 Glycerophosphoryl diester phosphodiesterase family LK428_RS01335 PF13145 PPIC-type PPIASE domain LK428_RS01340 PF13472 GDSL-like Lipase/Acylhydrolase family LK428_RS01345 PF00005 ABC transporter LK428_RS01355 PF03466 LysR substrate binding domain LK428_RS01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS01365 PF04972 BON domain LK428_RS01375 PF05532 CsbD-like LK428_RS01380 PF02875 Mur ligase family, glutamate ligase domain LK428_RS01380 PF08245 Mur ligase middle domain LK428_RS01380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK428_RS01385 PF08245 Mur ligase middle domain LK428_RS01385 PF08443 RimK-like ATP-grasp domain LK428_RS01385 PF02875 Mur ligase family, glutamate ligase domain LK428_RS01405 PF04305 Protein of unknown function (DUF455) LK428_RS01410 PF13406 Transglycosylase SLT domain LK428_RS01425 PF00149 Calcineurin-like phosphoesterase LK428_RS01440 PF00248 Aldo/keto reductase family LK428_RS01450 PF00905 Penicillin binding protein transpeptidase domain LK428_RS01450 PF00912 Transglycosylase LK428_RS01450 PF17092 Penicillin-binding protein OB-like domain LK428_RS01455 PF00326 Prolyl oligopeptidase family LK428_RS01470 PF00817 impB/mucB/samB family LK428_RS01470 PF11798 IMS family HHH motif LK428_RS01470 PF11799 impB/mucB/samB family C-terminal domain LK428_RS01480 PF09084 NMT1/THI5 like LK428_RS01490 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS01495 PF00005 ABC transporter LK428_RS01500 PF00005 ABC transporter LK428_RS01505 PF03972 MmgE/PrpD family LK428_RS01510 PF00171 Aldehyde dehydrogenase family LK428_RS01515 PF14537 Cytochrome c3 LK428_RS01515 PF00890 FAD binding domain LK428_RS01525 PF04303 PrpF protein LK428_RS01540 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK428_RS01550 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS01555 PF03466 LysR substrate binding domain LK428_RS01565 PF00501 AMP-binding enzyme LK428_RS01565 PF13193 AMP-binding enzyme C-terminal domain LK428_RS01590 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01595 PF03466 LysR substrate binding domain LK428_RS01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS01615 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS01620 PF00005 ABC transporter LK428_RS01620 PF00571 CBS domain LK428_RS01625 PF01361 Tautomerase enzyme LK428_RS01630 PF00108 Thiolase, N-terminal domain LK428_RS01630 PF02803 Thiolase, C-terminal domain LK428_RS01640 PF07729 FCD domain LK428_RS01640 PF00392 Bacterial regulatory proteins, gntR family LK428_RS01655 PF00501 AMP-binding enzyme LK428_RS01655 PF13193 AMP-binding enzyme C-terminal domain LK428_RS01660 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01665 PF00080 Copper/zinc superoxide dismutase (SODC) LK428_RS01680 PF00005 ABC transporter LK428_RS01685 PF03459 TOBE domain LK428_RS01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS01705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK428_RS01705 PF00529 HlyD membrane-fusion protein of T1SS LK428_RS01710 PF00873 AcrB/AcrD/AcrF family LK428_RS01720 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LK428_RS01725 PF01648 4'-phosphopantetheinyl transferase superfamily LK428_RS01730 PF00933 Glycosyl hydrolase family 3 N terminal domain LK428_RS01735 PF01541 GIY-YIG catalytic domain LK428_RS01735 PF02151 UvrB/uvrC motif LK428_RS01735 PF08459 UvrC Helix-hairpin-helix N-terminal LK428_RS01740 PF01066 CDP-alcohol phosphatidyltransferase LK428_RS01750 PF14489 QueF-like protein LK428_RS01750 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LK428_RS01755 PF00463 Isocitrate lyase family LK428_RS01770 PF01594 AI-2E family transporter LK428_RS01775 PF01061 ABC-2 type transporter LK428_RS01780 PF00005 ABC transporter LK428_RS01805 PF12801 4Fe-4S binding domain LK428_RS01805 PF13746 4Fe-4S dicluster domain LK428_RS01805 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LK428_RS01850 PF00202 Aminotransferase class-III LK428_RS01855 PF00155 Aminotransferase class I and II LK428_RS01865 PF13649 Methyltransferase domain LK428_RS01870 PF03788 LrgA family LK428_RS01875 PF04172 LrgB-like family LK428_RS01905 PF03706 Lysylphosphatidylglycerol synthase TM region LK428_RS01910 PF13091 PLD-like domain LK428_RS01915 PF03372 Endonuclease/Exonuclease/phosphatase family LK428_RS01925 PF03551 Transcriptional regulator PadR-like family LK428_RS01935 PF12951 Passenger-associated-transport-repeat LK428_RS01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS01945 PF03466 LysR substrate binding domain LK428_RS01955 PF03328 HpcH/HpaI aldolase/citrate lyase family LK428_RS01960 PF07729 FCD domain LK428_RS01960 PF00392 Bacterial regulatory proteins, gntR family LK428_RS01965 PF13380 CoA binding domain LK428_RS01965 PF13607 Succinyl-CoA ligase like flavodoxin domain LK428_RS01970 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01980 PF02515 CoA-transferase family III LK428_RS01985 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS01990 PF00356 Bacterial regulatory proteins, lacI family LK428_RS01995 PF00694 Aconitase C-terminal domain LK428_RS02005 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS02010 PF13378 Enolase C-terminal domain-like LK428_RS02020 PF08546 Ketopantoate reductase PanE/ApbA C terminal LK428_RS02020 PF02558 Ketopantoate reductase PanE/ApbA LK428_RS02030 PF00692 dUTPase LK428_RS02040 PF00155 Aminotransferase class I and II LK428_RS02040 PF00392 Bacterial regulatory proteins, gntR family LK428_RS02055 PF01037 Lrp/AsnC ligand binding domain LK428_RS02080 PF04231 Endonuclease I LK428_RS02100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LK428_RS02100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LK428_RS02105 PF04381 Putative exonuclease, RdgC LK428_RS02115 PF02515 CoA-transferase family III LK428_RS02120 PF03466 LysR substrate binding domain LK428_RS02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02140 PF00106 short chain dehydrogenase LK428_RS02150 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS02155 PF00005 ABC transporter LK428_RS02155 PF08402 TOBE domain LK428_RS02160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS02160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS02160 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS02165 PF00083 Sugar (and other) transporter LK428_RS02165 PF08946 Osmosensory transporter coiled coil LK428_RS02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS02170 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS02175 PF00072 Response regulator receiver domain LK428_RS02175 PF00486 Transcriptional regulatory protein, C terminal LK428_RS02180 PF00154 recA bacterial DNA recombination protein LK428_RS02185 PF02631 RecX family LK428_RS02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02190 PF03466 LysR substrate binding domain LK428_RS02195 PF08267 Cobalamin-independent synthase, N-terminal domain LK428_RS02195 PF01717 Cobalamin-independent synthase, Catalytic domain LK428_RS02205 PF00549 CoA-ligase LK428_RS02205 PF08442 ATP-grasp domain LK428_RS02210 PF02629 CoA binding domain LK428_RS02210 PF00549 CoA-ligase LK428_RS02215 PF03741 Integral membrane protein TerC family LK428_RS02220 PF03741 Integral membrane protein TerC family LK428_RS02225 PF03900 Porphobilinogen deaminase, C-terminal domain LK428_RS02225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LK428_RS02245 PF00719 Inorganic pyrophosphatase LK428_RS02250 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK428_RS02280 PF04972 BON domain LK428_RS02280 PF00263 Bacterial type II and III secretion system protein LK428_RS02280 PF13629 Pilus formation protein N terminal region LK428_RS02285 PF00437 Type II/IV secretion system protein LK428_RS02305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK428_RS02305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK428_RS02315 PF02293 AmiS/UreI family transporter LK428_RS02320 PF03069 Acetamidase/Formamidase family LK428_RS02335 PF01116 Fructose-bisphosphate aldolase class-II LK428_RS02345 PF01259 SAICAR synthetase LK428_RS02350 PF15723 Motility quorum-sensing regulator, toxin of MqsA LK428_RS02355 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA LK428_RS02365 PF02600 Disulfide bond formation protein DsbB LK428_RS02370 PF00731 AIR carboxylase LK428_RS02375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LK428_RS02375 PF02222 ATP-grasp domain LK428_RS02380 PF03481 Putative GTP-binding controlling metal-binding LK428_RS02380 PF01300 Telomere recombination LK428_RS02385 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS02390 PF01614 Bacterial transcriptional regulator LK428_RS02390 PF09339 IclR helix-turn-helix domain LK428_RS02395 PF00491 Arginase family LK428_RS02400 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS02410 PF00005 ABC transporter LK428_RS02415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS02415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS02425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS02425 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS02425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS02430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS02430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS02430 PF00205 Thiamine pyrophosphate enzyme, central domain LK428_RS02435 PF03466 LysR substrate binding domain LK428_RS02435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02440 PF02899 Phage integrase, N-terminal SAM-like domain LK428_RS02440 PF00589 Phage integrase family LK428_RS02445 PF04073 Aminoacyl-tRNA editing domain LK428_RS02450 PF01174 SNO glutamine amidotransferase family LK428_RS02460 PF00768 D-alanyl-D-alanine carboxypeptidase LK428_RS02470 PF07690 Major Facilitator Superfamily LK428_RS02485 PF12705 PD-(D/E)XK nuclease superfamily LK428_RS02485 PF00580 UvrD/REP helicase N-terminal domain LK428_RS02485 PF13361 UvrD-like helicase C-terminal domain LK428_RS02495 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LK428_RS02495 PF12169 DNA polymerase III subunits gamma and tau domain III LK428_RS02495 PF12170 DNA polymerase III tau subunit V interacting with alpha LK428_RS02500 PF02575 YbaB/EbfC DNA-binding family LK428_RS02505 PF13662 Toprim domain LK428_RS02505 PF02132 RecR protein LK428_RS02530 PF00005 ABC transporter LK428_RS02535 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS02540 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS02545 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS02550 PF00155 Aminotransferase class I and II LK428_RS02580 PF02627 Carboxymuconolactone decarboxylase family LK428_RS02585 PF12680 SnoaL-like domain LK428_RS02585 PF04542 Sigma-70 region 2 LK428_RS02585 PF08281 Sigma-70, region 4 LK428_RS02595 PF12843 Putative quorum-sensing-regulated virulence factor LK428_RS02600 PF00293 NUDIX domain LK428_RS02615 PF00027 Cyclic nucleotide-binding domain LK428_RS02615 PF13545 Crp-like helix-turn-helix domain LK428_RS02620 PF00004 ATPase family associated with various cellular activities (AAA) LK428_RS02620 PF07724 AAA domain (Cdc48 subfamily) LK428_RS02620 PF17871 AAA lid domain LK428_RS02620 PF02861 Clp amino terminal domain, pathogenicity island component LK428_RS02620 PF10431 C-terminal, D2-small domain, of ClpB protein LK428_RS02645 PF01425 Amidase LK428_RS02650 PF07286 Protein of unknown function (DUF1445) LK428_RS02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS02660 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS02660 PF01627 Hpt domain LK428_RS02660 PF00989 PAS fold LK428_RS02660 PF00072 Response regulator receiver domain LK428_RS02660 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS02665 PF00072 Response regulator receiver domain LK428_RS02665 PF00196 Bacterial regulatory proteins, luxR family LK428_RS02670 PF13018 Extended Signal Peptide of Type V secretion system LK428_RS02670 PF05860 haemagglutination activity domain LK428_RS02670 PF05594 Haemagluttinin repeat LK428_RS02670 PF13332 Hemagglutinin repeat LK428_RS02675 PF16970 Type-1 fimbrial protein, A LK428_RS02680 PF02753 Pili assembly chaperone PapD, C-terminal domain LK428_RS02680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LK428_RS02685 PF00577 Outer membrane usher protein LK428_RS02685 PF13954 PapC N-terminal domain LK428_RS02685 PF13953 PapC C-terminal domain LK428_RS02690 PF00419 Fimbrial protein LK428_RS02695 PF08479 POTRA domain, ShlB-type LK428_RS02695 PF17287 POTRA domain LK428_RS02695 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LK428_RS02710 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS02735 PF03466 LysR substrate binding domain LK428_RS02735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02745 PF01968 Hydantoinase/oxoprolinase LK428_RS02745 PF05378 Hydantoinase/oxoprolinase N-terminal region LK428_RS02760 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS02770 PF00005 ABC transporter LK428_RS02775 PF04607 Region found in RelA / SpoT proteins LK428_RS02775 PF13291 ACT domain LK428_RS02775 PF02824 TGS domain LK428_RS02780 PF01192 RNA polymerase Rpb6 LK428_RS02785 PF00625 Guanylate kinase LK428_RS02790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK428_RS02795 PF00034 Cytochrome c LK428_RS02805 PF00877 NlpC/P60 family LK428_RS02825 PF08340 Domain of unknown function (DUF1732) LK428_RS02825 PF03755 YicC-like family, N-terminal region LK428_RS02830 PF01138 3' exoribonuclease family, domain 1 LK428_RS02830 PF03725 3' exoribonuclease family, domain 2 LK428_RS02840 PF03466 LysR substrate binding domain LK428_RS02840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02850 PF00563 EAL domain LK428_RS02850 PF00990 Diguanylate cyclase, GGDEF domain LK428_RS02850 PF00672 HAMP domain LK428_RS02850 PF17154 Gammaproteobacterial periplasmic sensor domain LK428_RS02855 PF01725 Ham1 family LK428_RS02865 PF06969 HemN C-terminal domain LK428_RS02865 PF04055 Radical SAM superfamily LK428_RS02870 PF00120 Glutamine synthetase, catalytic domain LK428_RS02870 PF03951 Glutamine synthetase, beta-Grasp domain LK428_RS02875 PF00989 PAS fold LK428_RS02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS02875 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS02880 PF00072 Response regulator receiver domain LK428_RS02880 PF02954 Bacterial regulatory protein, Fis family LK428_RS02880 PF00158 Sigma-54 interaction domain LK428_RS02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02885 PF03466 LysR substrate binding domain LK428_RS02890 PF17954 Quercetinase C-terminal cupin domain LK428_RS02890 PF02678 Pirin LK428_RS02895 PF02678 Pirin LK428_RS02895 PF05726 Pirin C-terminal cupin domain LK428_RS02900 PF08402 TOBE domain LK428_RS02900 PF00005 ABC transporter LK428_RS02905 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS02915 PF00970 Oxidoreductase FAD-binding domain LK428_RS02915 PF00175 Oxidoreductase NAD-binding domain LK428_RS02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02920 PF03466 LysR substrate binding domain LK428_RS02930 PF00248 Aldo/keto reductase family LK428_RS02940 PF01042 Endoribonuclease L-PSP LK428_RS02945 PF17191 RecG wedge domain LK428_RS02945 PF00271 Helicase conserved C-terminal domain LK428_RS02945 PF00270 DEAD/DEAH box helicase LK428_RS02950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02950 PF03466 LysR substrate binding domain LK428_RS02955 PF03466 LysR substrate binding domain LK428_RS02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS02960 PF00171 Aldehyde dehydrogenase family LK428_RS02965 PF00210 Ferritin-like domain LK428_RS02980 PF00535 Glycosyl transferase family 2 LK428_RS02990 PF00005 ABC transporter LK428_RS03000 PF00534 Glycosyl transferases group 1 LK428_RS03015 PF02563 Polysaccharide biosynthesis/export protein LK428_RS03020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LK428_RS03020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LK428_RS03020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LK428_RS03025 PF01370 NAD dependent epimerase/dehydratase family LK428_RS03030 PF05159 Capsule polysaccharide biosynthesis protein LK428_RS03035 PF05159 Capsule polysaccharide biosynthesis protein LK428_RS03040 PF00106 short chain dehydrogenase LK428_RS03060 PF13458 Periplasmic binding protein LK428_RS03065 PF00005 ABC transporter LK428_RS03065 PF17912 MalK OB fold domain LK428_RS03070 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS03075 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS03080 PF13416 Bacterial extracellular solute-binding protein LK428_RS03085 PF03807 NADP oxidoreductase coenzyme F420-dependent LK428_RS03085 PF14748 Pyrroline-5-carboxylate reductase dimerisation LK428_RS03090 PF02592 Putative vitamin uptake transporter LK428_RS03095 PF13458 Periplasmic binding protein LK428_RS03100 PF02653 Branched-chain amino acid transport system / permease component LK428_RS03105 PF02653 Branched-chain amino acid transport system / permease component LK428_RS03105 PF11862 Domain of unknown function (DUF3382) LK428_RS03110 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS03110 PF00005 ABC transporter LK428_RS03115 PF00005 ABC transporter LK428_RS03135 PF00892 EamA-like transporter family LK428_RS03150 PF04241 Protein of unknown function (DUF423) LK428_RS03160 PF08808 RES domain LK428_RS03165 PF03180 NLPA lipoprotein LK428_RS03170 PF01070 FMN-dependent dehydrogenase LK428_RS03175 PF02666 Phosphatidylserine decarboxylase LK428_RS03190 PF03099 Biotin/lipoate A/B protein ligase family LK428_RS03190 PF10437 Bacterial lipoate protein ligase C-terminus LK428_RS03205 PF02798 Glutathione S-transferase, N-terminal domain LK428_RS03205 PF00043 Glutathione S-transferase, C-terminal domain LK428_RS03210 PF00255 Glutathione peroxidase LK428_RS03250 PF00886 Ribosomal protein S16 LK428_RS03255 PF01782 RimM N-terminal domain LK428_RS03260 PF01746 tRNA (Guanine-1)-methyltransferase LK428_RS03265 PF00266 Aminotransferase class-V LK428_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS03280 PF08521 Two-component sensor kinase N-terminal LK428_RS03280 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS03295 PF08264 Anticodon-binding domain of tRNA LK428_RS03295 PF00133 tRNA synthetases class I (I, L, M and V) LK428_RS03295 PF10458 Valyl tRNA synthetase tRNA binding arm LK428_RS03300 PF00334 Nucleoside diphosphate kinase LK428_RS03305 PF04055 Radical SAM superfamily LK428_RS03315 PF04551 GcpE protein LK428_RS03320 PF03129 Anticodon binding domain LK428_RS03320 PF13393 Histidyl-tRNA synthetase LK428_RS03325 PF09976 Tetratricopeptide repeat-like domain LK428_RS03330 PF13360 PQQ-like domain LK428_RS03335 PF01926 50S ribosome-binding GTPase LK428_RS03335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LK428_RS03340 PF00155 Aminotransferase class I and II LK428_RS03345 PF17209 Hfq protein LK428_RS03350 PF01926 50S ribosome-binding GTPase LK428_RS03350 PF16360 GTP-binding GTPase Middle Region LK428_RS03350 PF13167 GTP-binding GTPase N-terminal LK428_RS03355 PF01145 SPFH domain / Band 7 family LK428_RS03355 PF12221 Bacterial membrane protein N terminal LK428_RS03360 PF01145 SPFH domain / Band 7 family LK428_RS03365 PF13393 Histidyl-tRNA synthetase LK428_RS03370 PF00709 Adenylosuccinate synthetase LK428_RS03375 PF00156 Phosphoribosyl transferase domain LK428_RS03380 PF01165 Ribosomal protein S21 LK428_RS03385 PF10410 DnaB-helicase binding domain of primase LK428_RS03385 PF08278 DNA primase DnaG DnaB-binding LK428_RS03385 PF08275 DNA primase catalytic core, N-terminal domain LK428_RS03385 PF01807 CHC2 zinc finger LK428_RS03395 PF04539 Sigma-70 region 3 LK428_RS03395 PF04545 Sigma-70, region 4 LK428_RS03395 PF04542 Sigma-70 region 2 LK428_RS03395 PF04546 Sigma-70, non-essential region LK428_RS03395 PF03979 Sigma-70 factor, region 1.1 LK428_RS03395 PF00140 Sigma-70 factor, region 1.2 LK428_RS03420 PF02653 Branched-chain amino acid transport system / permease component LK428_RS03420 PF11862 Domain of unknown function (DUF3382) LK428_RS03425 PF02653 Branched-chain amino acid transport system / permease component LK428_RS03430 PF13458 Periplasmic binding protein LK428_RS03435 PF00355 Rieske [2Fe-2S] domain LK428_RS03435 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LK428_RS03440 PF00866 Ring hydroxylating beta subunit LK428_RS03445 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS03455 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS03460 PF02515 CoA-transferase family III LK428_RS03465 PF07859 alpha/beta hydrolase fold LK428_RS03470 PF00501 AMP-binding enzyme LK428_RS03470 PF14535 AMP-binding enzyme C-terminal domain LK428_RS03475 PF00108 Thiolase, N-terminal domain LK428_RS03475 PF02803 Thiolase, C-terminal domain LK428_RS03485 PF12228 Protein of unknown function (DUF3604) LK428_RS03500 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS03525 PF01206 Sulfurtransferase TusA LK428_RS03530 PF02272 DHHA1 domain LK428_RS03530 PF01411 tRNA synthetases class II (A) LK428_RS03530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LK428_RS03580 PF01425 Amidase LK428_RS03585 PF00005 ABC transporter LK428_RS03585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS03590 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS03595 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS03600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS03615 PF03466 LysR substrate binding domain LK428_RS03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS03620 PF13416 Bacterial extracellular solute-binding protein LK428_RS03625 PF01266 FAD dependent oxidoreductase LK428_RS03630 PF00970 Oxidoreductase FAD-binding domain LK428_RS03630 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS03630 PF00175 Oxidoreductase NAD-binding domain LK428_RS03635 PF02261 Aspartate decarboxylase LK428_RS03650 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LK428_RS03655 PF17042 Nucleotide-binding C-terminal domain LK428_RS03655 PF07005 Sugar-binding N-terminal domain LK428_RS03670 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS03675 PF02142 MGS-like domain LK428_RS03680 PF04384 Iron-sulphur cluster assembly LK428_RS03685 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS03690 PF00012 Hsp70 protein LK428_RS03695 PF07743 HSCB C-terminal oligomerisation domain LK428_RS03700 PF01521 Iron-sulphur cluster biosynthesis LK428_RS03705 PF01592 NifU-like N terminal domain LK428_RS03710 PF00266 Aminotransferase class-V LK428_RS03715 PF02082 Transcriptional regulator LK428_RS03720 PF01451 Low molecular weight phosphotyrosine protein phosphatase LK428_RS03725 PF17757 UvrB interaction domain LK428_RS03725 PF12344 Ultra-violet resistance protein B LK428_RS03725 PF04851 Type III restriction enzyme, res subunit LK428_RS03725 PF00271 Helicase conserved C-terminal domain LK428_RS03725 PF02151 UvrB/uvrC motif LK428_RS03730 PF00155 Aminotransferase class I and II LK428_RS03735 PF01726 LexA DNA binding domain LK428_RS03735 PF00717 Peptidase S24-like LK428_RS03770 PF01144 Coenzyme A transferase LK428_RS03775 PF01144 Coenzyme A transferase LK428_RS03800 PF02803 Thiolase, C-terminal domain LK428_RS03800 PF00108 Thiolase, N-terminal domain LK428_RS03810 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS03815 PF01575 MaoC like domain LK428_RS03820 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS03825 PF02515 CoA-transferase family III LK428_RS03830 PF03466 LysR substrate binding domain LK428_RS03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS03835 PF02190 ATP-dependent protease La (LON) substrate-binding domain LK428_RS03835 PF00004 ATPase family associated with various cellular activities (AAA) LK428_RS03835 PF05362 Lon protease (S16) C-terminal proteolytic domain LK428_RS03840 PF07724 AAA domain (Cdc48 subfamily) LK428_RS03840 PF10431 C-terminal, D2-small domain, of ClpB protein LK428_RS03840 PF06689 ClpX C4-type zinc finger LK428_RS03845 PF00574 Clp protease LK428_RS03850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK428_RS03850 PF05698 Bacterial trigger factor protein (TF) C-terminus LK428_RS03850 PF05697 Bacterial trigger factor protein (TF) LK428_RS03855 PF03350 Uncharacterized protein family, UPF0114 LK428_RS03860 PF00313 'Cold-shock' DNA-binding domain LK428_RS03875 PF00313 'Cold-shock' DNA-binding domain LK428_RS03905 PF00155 Aminotransferase class I and II LK428_RS03910 PF00132 Bacterial transferase hexapeptide (six repeats) LK428_RS03910 PF14602 Hexapeptide repeat of succinyl-transferase LK428_RS03910 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LK428_RS03915 PF01546 Peptidase family M20/M25/M40 LK428_RS03915 PF07687 Peptidase dimerisation domain LK428_RS03920 PF05175 Methyltransferase small domain LK428_RS03925 PF12848 ABC transporter LK428_RS03925 PF00005 ABC transporter LK428_RS03930 PF07715 TonB-dependent Receptor Plug Domain LK428_RS03935 PF00580 UvrD/REP helicase N-terminal domain LK428_RS03935 PF13361 UvrD-like helicase C-terminal domain LK428_RS03955 PF00551 Formyl transferase LK428_RS03960 PF06574 FAD synthetase LK428_RS03960 PF01687 Riboflavin kinase LK428_RS03965 PF06827 Zinc finger found in FPG and IleRS LK428_RS03965 PF00133 tRNA synthetases class I (I, L, M and V) LK428_RS03965 PF08264 Anticodon-binding domain of tRNA LK428_RS03970 PF01252 Signal peptidase (SPase) II LK428_RS03975 PF04127 DNA / pantothenate metabolism flavoprotein LK428_RS03975 PF02441 Flavoprotein LK428_RS03985 PF01037 Lrp/AsnC ligand binding domain LK428_RS04000 PF00884 Sulfatase LK428_RS04035 PF07726 ATPase family associated with various cellular activities (AAA) LK428_RS04035 PF17863 AAA lid domain LK428_RS04050 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS04060 PF03741 Integral membrane protein TerC family LK428_RS04070 PF00005 ABC transporter LK428_RS04070 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS04075 PF00005 ABC transporter LK428_RS04085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS04085 PF14759 Reductase C-terminal LK428_RS04115 PF02567 Phenazine biosynthesis-like protein LK428_RS04125 PF03239 Iron permease FTR1 family LK428_RS04135 PF10634 Fe2+ transport protein LK428_RS04140 PF07879 PHB/PHA accumulation regulator DNA-binding domain LK428_RS04140 PF05233 PHB accumulation regulatory domain LK428_RS04145 PF00106 short chain dehydrogenase LK428_RS04150 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LK428_RS04155 PF02578 Multi-copper polyphenol oxidoreductase laccase LK428_RS04160 PF00849 RNA pseudouridylate synthase LK428_RS04160 PF01479 S4 domain LK428_RS04165 PF13525 Outer membrane lipoprotein LK428_RS04170 PF13307 Helicase C-terminal domain LK428_RS04170 PF04851 Type III restriction enzyme, res subunit LK428_RS04175 PF09371 Tex-like protein N-terminal domain LK428_RS04175 PF00575 S1 RNA binding domain LK428_RS04175 PF16921 Tex protein YqgF-like domain LK428_RS04175 PF17674 HHH domain LK428_RS04185 PF00579 tRNA synthetases class I (W and Y) LK428_RS04210 PF07715 TonB-dependent Receptor Plug Domain LK428_RS04210 PF00593 TonB dependent receptor LK428_RS04215 PF04773 FecR protein LK428_RS04215 PF16220 Domain of unknown function (DUF4880) LK428_RS04220 PF08281 Sigma-70, region 4 LK428_RS04220 PF04542 Sigma-70 region 2 LK428_RS04235 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS04245 PF03466 LysR substrate binding domain LK428_RS04245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS04255 PF03969 AFG1-like ATPase LK428_RS04260 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS04260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK428_RS04265 PF00364 Biotin-requiring enzyme LK428_RS04265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK428_RS04265 PF02817 e3 binding domain LK428_RS04270 PF16078 2-oxoglutarate dehydrogenase N-terminus LK428_RS04270 PF02779 Transketolase, pyrimidine binding domain LK428_RS04270 PF00676 Dehydrogenase E1 component LK428_RS04270 PF16870 2-oxoglutarate dehydrogenase C-terminal LK428_RS04285 PF01037 Lrp/AsnC ligand binding domain LK428_RS04290 PF17831 Pyruvate dehydrogenase E1 component middle domain LK428_RS04290 PF00456 Transketolase, thiamine diphosphate binding domain LK428_RS04295 PF01515 Phosphate acetyl/butaryl transferase LK428_RS04295 PF00390 Malic enzyme, N-terminal domain LK428_RS04295 PF03949 Malic enzyme, NAD binding domain LK428_RS04300 PF16970 Type-1 fimbrial protein, A LK428_RS04310 PF00474 Sodium:solute symporter family LK428_RS04325 PF03814 Potassium-transporting ATPase A subunit LK428_RS04335 PF02669 K+-transporting ATPase, c chain LK428_RS04345 PF00486 Transcriptional regulatory protein, C terminal LK428_RS04345 PF00072 Response regulator receiver domain LK428_RS04365 PF00180 Isocitrate/isopropylmalate dehydrogenase LK428_RS04380 PF00034 Cytochrome c LK428_RS04385 PF17862 AAA+ lid domain LK428_RS04385 PF01434 Peptidase family M41 LK428_RS04385 PF00004 ATPase family associated with various cellular activities (AAA) LK428_RS04405 PF05193 Peptidase M16 inactive domain LK428_RS04405 PF00675 Insulinase (Peptidase family M16) LK428_RS04410 PF01556 DnaJ C terminal domain LK428_RS04410 PF00226 DnaJ domain LK428_RS04410 PF00684 DnaJ central domain LK428_RS04415 PF00012 Hsp70 protein LK428_RS04425 PF01025 GrpE LK428_RS04435 PF00762 Ferrochelatase LK428_RS04440 PF01628 HrcA protein C terminal domain LK428_RS04440 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LK428_RS04445 PF01513 ATP-NAD kinase LK428_RS04450 PF02463 RecF/RecN/SMC N terminal domain LK428_RS04455 PF01475 Ferric uptake regulator family LK428_RS04460 PF04355 SmpA / OmlA family LK428_RS04465 PF05173 Dihydrodipicolinate reductase, C-terminus LK428_RS04465 PF01113 Dihydrodipicolinate reductase, N-terminus LK428_RS04470 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LK428_RS04470 PF01565 FAD binding domain LK428_RS04480 PF00561 alpha/beta hydrolase fold LK428_RS04490 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS04495 PF00551 Formyl transferase LK428_RS04505 PF01571 Aminomethyltransferase folate-binding domain LK428_RS04505 PF08669 Glycine cleavage T-protein C-terminal barrel domain LK428_RS04505 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS04505 PF17806 Sarcosine oxidase A3 domain LK428_RS04510 PF04267 Sarcosine oxidase, delta subunit family LK428_RS04515 PF01266 FAD dependent oxidoreductase LK428_RS04525 PF03466 LysR substrate binding domain LK428_RS04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS04530 PF02615 Malate/L-lactate dehydrogenase LK428_RS04535 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LK428_RS04535 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LK428_RS04540 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS04550 PF02515 CoA-transferase family III LK428_RS04555 PF01575 MaoC like domain LK428_RS04565 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS04570 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS04595 PF00005 ABC transporter LK428_RS04600 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS04605 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS04610 PF12849 PBP superfamily domain LK428_RS04615 PF13089 Polyphosphate kinase N-terminal domain LK428_RS04615 PF02503 Polyphosphate kinase middle domain LK428_RS04615 PF13090 Polyphosphate kinase C-terminal domain 2 LK428_RS04615 PF17941 Polyphosphate kinase C-terminal domain 1 LK428_RS04620 PF02541 Ppx/GppA phosphatase family LK428_RS04630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK428_RS04630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK428_RS04630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK428_RS04630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK428_RS04635 PF00809 Pterin binding enzyme LK428_RS04640 PF00004 ATPase family associated with various cellular activities (AAA) LK428_RS04640 PF17862 AAA+ lid domain LK428_RS04640 PF06480 FtsH Extracellular LK428_RS04640 PF01434 Peptidase family M41 LK428_RS04650 PF01728 FtsJ-like methyltransferase LK428_RS04655 PF01985 CRS1 / YhbY (CRM) domain LK428_RS04665 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK428_RS04675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS04675 PF14759 Reductase C-terminal LK428_RS04685 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS04695 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS04700 PF13380 CoA binding domain LK428_RS04700 PF13607 Succinyl-CoA ligase like flavodoxin domain LK428_RS04700 PF00583 Acetyltransferase (GNAT) family LK428_RS04705 PF13607 Succinyl-CoA ligase like flavodoxin domain LK428_RS04705 PF13380 CoA binding domain LK428_RS04710 PF00364 Biotin-requiring enzyme LK428_RS04715 PF01039 Carboxyl transferase domain LK428_RS04725 PF01039 Carboxyl transferase domain LK428_RS04730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK428_RS04730 PF02785 Biotin carboxylase C-terminal domain LK428_RS04730 PF00289 Biotin carboxylase, N-terminal domain LK428_RS04735 PF07702 UTRA domain LK428_RS04735 PF00392 Bacterial regulatory proteins, gntR family LK428_RS04755 PF00682 HMGL-like LK428_RS04755 PF00364 Biotin-requiring enzyme LK428_RS04755 PF02436 Conserved carboxylase domain LK428_RS04760 PF00364 Biotin-requiring enzyme LK428_RS04770 PF01966 HD domain LK428_RS04795 PF07238 PilZ domain LK428_RS04795 PF07317 Flagellar regulator YcgR LK428_RS04815 PF05724 Thiopurine S-methyltransferase (TPMT) LK428_RS04820 PF00005 ABC transporter LK428_RS04820 PF00664 ABC transporter transmembrane region LK428_RS04830 PF13411 MerR HTH family regulatory protein LK428_RS04835 PF00403 Heavy-metal-associated domain LK428_RS04845 PF04344 Chemotaxis phosphatase, CheZ LK428_RS04850 PF00072 Response regulator receiver domain LK428_RS04855 PF01339 CheB methylesterase LK428_RS04855 PF00072 Response regulator receiver domain LK428_RS04865 PF00672 HAMP domain LK428_RS04865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK428_RS04865 PF02203 Tar ligand binding domain homologue LK428_RS04870 PF01584 CheW-like domain LK428_RS04875 PF01627 Hpt domain LK428_RS04875 PF02895 Signal transducing histidine kinase, homodimeric domain LK428_RS04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS04875 PF01584 CheW-like domain LK428_RS04875 PF09078 CheY binding LK428_RS04880 PF00072 Response regulator receiver domain LK428_RS04885 PF13677 Membrane MotB of proton-channel complex MotA/MotB LK428_RS04885 PF00691 OmpA family LK428_RS04890 PF01618 MotA/TolQ/ExbB proton channel family LK428_RS04895 PF05280 Flagellar transcriptional activator (FlhC) LK428_RS04900 PF05247 Flagellar transcriptional activator (FlhD) LK428_RS04905 PF04545 Sigma-70, region 4 LK428_RS04905 PF04539 Sigma-70 region 3 LK428_RS04905 PF04542 Sigma-70 region 2 LK428_RS04920 PF00128 Alpha amylase, catalytic domain LK428_RS04920 PF11896 Domain of unknown function (DUF3416) LK428_RS04935 PF18085 Maltokinase N-terminal cap domain LK428_RS04940 PF00128 Alpha amylase, catalytic domain LK428_RS04940 PF02806 Alpha amylase, C-terminal all-beta domain LK428_RS04940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LK428_RS04945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LK428_RS04945 PF00128 Alpha amylase, catalytic domain LK428_RS04950 PF11941 Domain of unknown function (DUF3459) LK428_RS04950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LK428_RS04950 PF00128 Alpha amylase, catalytic domain LK428_RS04970 PF02446 4-alpha-glucanotransferase LK428_RS04975 PF00128 Alpha amylase, catalytic domain LK428_RS04985 PF08543 Phosphomethylpyrimidine kinase LK428_RS04990 PF01168 Alanine racemase, N-terminal domain LK428_RS04995 PF00155 Aminotransferase class I and II LK428_RS04995 PF00392 Bacterial regulatory proteins, gntR family LK428_RS05010 PF00582 Universal stress protein family LK428_RS05015 PF00248 Aldo/keto reductase family LK428_RS05025 PF01447 Thermolysin metallopeptidase, catalytic domain LK428_RS05025 PF02868 Thermolysin metallopeptidase, alpha-helical domain LK428_RS05025 PF16485 Protealysin propeptide LK428_RS05030 PF07681 DoxX LK428_RS05055 PF01152 Bacterial-like globin LK428_RS05090 PF01425 Amidase LK428_RS05100 PF01522 Polysaccharide deacetylase LK428_RS05105 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS05130 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS05130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK428_RS05155 PF03466 LysR substrate binding domain LK428_RS05155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS05165 PF01799 [2Fe-2S] binding domain LK428_RS05165 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS05170 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LK428_RS05180 PF06719 AraC-type transcriptional regulator N-terminus LK428_RS05180 PF12833 Helix-turn-helix domain LK428_RS05200 PF07690 Major Facilitator Superfamily LK428_RS05215 PF00583 Acetyltransferase (GNAT) family LK428_RS05225 PF00005 ABC transporter LK428_RS05225 PF00664 ABC transporter transmembrane region LK428_RS05235 PF02535 ZIP Zinc transporter LK428_RS05270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LK428_RS05270 PF03625 Domain of unknown function DUF302 LK428_RS05280 PF12833 Helix-turn-helix domain LK428_RS05280 PF02805 Metal binding domain of Ada LK428_RS05285 PF07237 Protein of unknown function (DUF1428) LK428_RS05290 PF02567 Phenazine biosynthesis-like protein LK428_RS05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS05295 PF03466 LysR substrate binding domain LK428_RS05300 PF04286 Protein of unknown function (DUF445) LK428_RS05315 PF00171 Aldehyde dehydrogenase family LK428_RS05320 PF02954 Bacterial regulatory protein, Fis family LK428_RS05320 PF01590 GAF domain LK428_RS05320 PF00158 Sigma-54 interaction domain LK428_RS05330 PF01176 Translation initiation factor 1A / IF-1 LK428_RS05340 PF01476 LysM domain LK428_RS05340 PF08525 Opacity-associated protein A N-terminal motif LK428_RS05340 PF01551 Peptidase family M23 LK428_RS05350 PF00994 Probable molybdopterin binding domain LK428_RS05355 PF01384 Phosphate transporter family LK428_RS05375 PF01556 DnaJ C terminal domain LK428_RS05375 PF00226 DnaJ domain LK428_RS05400 PF14834 Glutathione S-transferase, C-terminal domain LK428_RS05400 PF02798 Glutathione S-transferase, N-terminal domain LK428_RS05405 PF11339 Protein of unknown function (DUF3141) LK428_RS05410 PF01515 Phosphate acetyl/butaryl transferase LK428_RS05415 PF00871 Acetokinase family LK428_RS05425 PF00162 Phosphoglycerate kinase LK428_RS05430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LK428_RS05430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LK428_RS05435 PF02779 Transketolase, pyrimidine binding domain LK428_RS05435 PF02780 Transketolase, C-terminal domain LK428_RS05435 PF00456 Transketolase, thiamine diphosphate binding domain LK428_RS05440 PF04452 RNA methyltransferase LK428_RS05450 PF00700 Bacterial flagellin C-terminal helical region LK428_RS05450 PF00669 Bacterial flagellin N-terminal helical region LK428_RS05455 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS05455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK428_RS05460 PF00364 Biotin-requiring enzyme LK428_RS05460 PF02817 e3 binding domain LK428_RS05460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK428_RS05465 PF17831 Pyruvate dehydrogenase E1 component middle domain LK428_RS05465 PF00456 Transketolase, thiamine diphosphate binding domain LK428_RS05470 PF00989 PAS fold LK428_RS05470 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS05475 PF00196 Bacterial regulatory proteins, luxR family LK428_RS05475 PF00072 Response regulator receiver domain LK428_RS05480 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LK428_RS05480 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LK428_RS05485 PF01432 Peptidase family M3 LK428_RS05490 PF02630 SCO1/SenC LK428_RS05500 PF02321 Outer membrane efflux protein LK428_RS05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS05515 PF03466 LysR substrate binding domain LK428_RS05520 PF00849 RNA pseudouridylate synthase LK428_RS05520 PF01479 S4 domain LK428_RS05525 PF04345 Chorismate lyase LK428_RS05540 PF00248 Aldo/keto reductase family LK428_RS05550 PF00293 NUDIX domain LK428_RS05555 PF01245 Ribosomal protein L19 LK428_RS05570 PF04055 Radical SAM superfamily LK428_RS05580 PF01507 Phosphoadenosine phosphosulfate reductase family LK428_RS05590 PF00005 ABC transporter LK428_RS05590 PF17850 CysA C-terminal regulatory domain LK428_RS05590 PF12857 TOBE-like domain LK428_RS05610 PF10417 C-terminal domain of 1-Cys peroxiredoxin LK428_RS05610 PF00578 AhpC/TSA family LK428_RS05615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS05615 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS05615 PF12806 Acetyl-CoA dehydrogenase C-terminal like LK428_RS05615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS05620 PF00766 Electron transfer flavoprotein FAD-binding domain LK428_RS05620 PF01012 Electron transfer flavoprotein domain LK428_RS05625 PF01012 Electron transfer flavoprotein domain LK428_RS05630 PF00850 Histone deacetylase domain LK428_RS05635 PF13406 Transglycosylase SLT domain LK428_RS05640 PF00291 Pyridoxal-phosphate dependent enzyme LK428_RS05650 PF10531 SLBB domain LK428_RS05655 PF01370 NAD dependent epimerase/dehydratase family LK428_RS05660 PF00294 pfkB family carbohydrate kinase LK428_RS05665 PF18073 Rubredoxin metal binding domain LK428_RS05675 PF00216 Bacterial DNA-binding protein LK428_RS05680 PF00575 S1 RNA binding domain LK428_RS05685 PF02224 Cytidylate kinase LK428_RS05690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LK428_RS05695 PF02153 Prephenate dehydrogenase LK428_RS05700 PF00800 Prephenate dehydratase LK428_RS05700 PF01817 Chorismate mutase type II LK428_RS05700 PF01842 ACT domain LK428_RS05705 PF00266 Aminotransferase class-V LK428_RS05710 PF00521 DNA gyrase/topoisomerase IV, subunit A LK428_RS05710 PF03989 DNA gyrase C-terminal domain, beta-propeller LK428_RS05720 PF00691 OmpA family LK428_RS05730 PF13419 Haloacid dehalogenase-like hydrolase LK428_RS05735 PF07690 Major Facilitator Superfamily LK428_RS05755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK428_RS05765 PF03466 LysR substrate binding domain LK428_RS05765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS05770 PF01494 FAD binding domain LK428_RS05780 PF13458 Periplasmic binding protein LK428_RS05795 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS05795 PF00005 ABC transporter LK428_RS05805 PF00392 Bacterial regulatory proteins, gntR family LK428_RS05805 PF07729 FCD domain LK428_RS05810 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LK428_RS05810 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS05820 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LK428_RS05820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS05830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS05830 PF00205 Thiamine pyrophosphate enzyme, central domain LK428_RS05830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS05835 PF07687 Peptidase dimerisation domain LK428_RS05835 PF01546 Peptidase family M20/M25/M40 LK428_RS05845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LK428_RS05845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LK428_RS05855 PF00005 ABC transporter LK428_RS05865 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS05880 PF01026 TatD related DNase LK428_RS05885 PF12169 DNA polymerase III subunits gamma and tau domain III LK428_RS05885 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LK428_RS05885 PF12170 DNA polymerase III tau subunit V interacting with alpha LK428_RS05890 PF02223 Thymidylate kinase LK428_RS05895 PF02618 YceG-like family LK428_RS05900 PF01571 Aminomethyltransferase folate-binding domain LK428_RS05915 PF00970 Oxidoreductase FAD-binding domain LK428_RS05915 PF00042 Globin LK428_RS05915 PF00175 Oxidoreductase NAD-binding domain LK428_RS05920 PF02082 Transcriptional regulator LK428_RS05925 PF01266 FAD dependent oxidoreductase LK428_RS05940 PF00583 Acetyltransferase (GNAT) family LK428_RS05945 PF12802 MarR family LK428_RS05955 PF00202 Aminotransferase class-III LK428_RS05960 PF16868 NMT1-like family LK428_RS05975 PF04235 Protein of unknown function (DUF418) LK428_RS05980 PF00521 DNA gyrase/topoisomerase IV, subunit A LK428_RS05990 PF00204 DNA gyrase B LK428_RS05990 PF00986 DNA gyrase B subunit, carboxyl terminus LK428_RS05990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS05990 PF01751 Toprim domain LK428_RS05995 PF00085 Thioredoxin LK428_RS06000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK428_RS06000 PF07498 Rho termination factor, N-terminal domain LK428_RS06000 PF07497 Rho termination factor, RNA-binding domain LK428_RS06010 PF03710 Glutamate-ammonia ligase adenylyltransferase LK428_RS06010 PF08335 GlnD PII-uridylyltransferase LK428_RS06015 PF02677 Epoxyqueuosine reductase QueH LK428_RS06020 PF03315 Serine dehydratase beta chain LK428_RS06020 PF03313 Serine dehydratase alpha chain LK428_RS06025 PF02690 Na+/Pi-cotransporter LK428_RS06030 PF01738 Dienelactone hydrolase family LK428_RS06040 PF01367 5'-3' exonuclease, C-terminal SAM fold LK428_RS06040 PF00476 DNA polymerase family A LK428_RS06040 PF01612 3'-5' exonuclease LK428_RS06040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LK428_RS06045 PF03641 Possible lysine decarboxylase LK428_RS06060 PF00679 Elongation factor G C-terminus LK428_RS06060 PF00009 Elongation factor Tu GTP binding domain LK428_RS06060 PF03144 Elongation factor Tu domain 2 LK428_RS06065 PF01509 TruB family pseudouridylate synthase (N terminal domain) LK428_RS06065 PF16198 tRNA pseudouridylate synthase B C-terminal domain LK428_RS06070 PF02033 Ribosome-binding factor A LK428_RS06075 PF00009 Elongation factor Tu GTP binding domain LK428_RS06075 PF11987 Translation-initiation factor 2 LK428_RS06075 PF08364 Bacterial translation initiation factor IF-2 associated region LK428_RS06075 PF04760 Translation initiation factor IF-2, N-terminal region LK428_RS06080 PF08529 NusA N-terminal domain LK428_RS06080 PF13184 NusA-like KH domain LK428_RS06085 PF17384 RimP C-terminal SH3 domain LK428_RS06085 PF02576 RimP N-terminal domain LK428_RS06090 PF00849 RNA pseudouridylate synthase LK428_RS06090 PF01479 S4 domain LK428_RS06095 PF04079 Segregation and condensation complex subunit ScpB LK428_RS06105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS06105 PF03466 LysR substrate binding domain LK428_RS06115 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK428_RS06115 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK428_RS06135 PF14497 Glutathione S-transferase, C-terminal domain LK428_RS06135 PF02798 Glutathione S-transferase, N-terminal domain LK428_RS06140 PF02401 LytB protein LK428_RS06145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK428_RS06150 PF04002 RadC-like JAB domain LK428_RS06155 PF04199 Putative cyclase LK428_RS06160 PF03301 Tryptophan 2,3-dioxygenase LK428_RS06165 PF01197 Ribosomal protein L31 LK428_RS06175 PF01554 MatE LK428_RS06190 PF18073 Rubredoxin metal binding domain LK428_RS06195 PF12034 Domain of unknown function (DUF3520) LK428_RS06195 PF00092 von Willebrand factor type A domain LK428_RS06195 PF12450 von Willebrand factor LK428_RS06200 PF04542 Sigma-70 region 2 LK428_RS06200 PF04545 Sigma-70, region 4 LK428_RS06215 PF00842 Alanine racemase, C-terminal domain LK428_RS06215 PF01168 Alanine racemase, N-terminal domain LK428_RS06230 PF01593 Flavin containing amine oxidoreductase LK428_RS06230 PF01593 Flavin containing amine oxidoreductase LK428_RS06235 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LK428_RS06245 PF01061 ABC-2 type transporter LK428_RS06250 PF00005 ABC transporter LK428_RS06270 PF02424 ApbE family LK428_RS06275 PF00258 Flavodoxin LK428_RS06275 PF00175 Oxidoreductase NAD-binding domain LK428_RS06275 PF00667 FAD binding domain LK428_RS06285 PF07969 Amidohydrolase family LK428_RS06290 PF03466 LysR substrate binding domain LK428_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS06300 PF09370 Phosphoenolpyruvate hydrolase-like LK428_RS06320 PF03797 Autotransporter beta-domain LK428_RS06320 PF03212 Pertactin LK428_RS06330 PF06969 HemN C-terminal domain LK428_RS06330 PF04055 Radical SAM superfamily LK428_RS06340 PF00196 Bacterial regulatory proteins, luxR family LK428_RS06345 PF03129 Anticodon binding domain LK428_RS06345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK428_RS06345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LK428_RS06345 PF02824 TGS domain LK428_RS06350 PF05198 Translation initiation factor IF-3, N-terminal domain LK428_RS06350 PF00707 Translation initiation factor IF-3, C-terminal domain LK428_RS06355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LK428_RS06355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LK428_RS06365 PF00381 PTS HPr component phosphorylation site LK428_RS06370 PF05524 PEP-utilising enzyme, N-terminal LK428_RS06370 PF02896 PEP-utilising enzyme, TIM barrel domain LK428_RS06370 PF00391 PEP-utilising enzyme, mobile domain LK428_RS06385 PF02423 Ornithine cyclodeaminase/mu-crystallin family LK428_RS06395 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS06410 PF00005 ABC transporter LK428_RS06425 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LK428_RS06430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS06440 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS06445 PF01416 tRNA pseudouridine synthase LK428_RS06455 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK428_RS06455 PF02774 Semialdehyde dehydrogenase, dimerisation domain LK428_RS06460 PF00180 Isocitrate/isopropylmalate dehydrogenase LK428_RS06465 PF00694 Aconitase C-terminal domain LK428_RS06470 PF00330 Aconitase family (aconitate hydratase) LK428_RS06475 PF12849 PBP superfamily domain LK428_RS06480 PF00005 ABC transporter LK428_RS06515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK428_RS06515 PF00384 Molybdopterin oxidoreductase LK428_RS06515 PF01568 Molydopterin dinucleotide binding domain LK428_RS06545 PF10609 NUBPL iron-transfer P-loop NTPase LK428_RS06550 PF12804 MobA-like NTP transferase domain LK428_RS06555 PF00994 Probable molybdopterin binding domain LK428_RS06555 PF03454 MoeA C-terminal region (domain IV) LK428_RS06555 PF03453 MoeA N-terminal region (domain I and II) LK428_RS06560 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LK428_RS06565 PF01435 Peptidase family M48 LK428_RS06570 PF01264 Chorismate synthase LK428_RS06575 PF08448 PAS fold LK428_RS06575 PF08447 PAS fold LK428_RS06575 PF00563 EAL domain LK428_RS06575 PF00990 Diguanylate cyclase, GGDEF domain LK428_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS06600 PF08402 TOBE domain LK428_RS06600 PF00005 ABC transporter LK428_RS06605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS06605 PF03466 LysR substrate binding domain LK428_RS06610 PF00300 Histidine phosphatase superfamily (branch 1) LK428_RS06620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK428_RS06620 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LK428_RS06620 PF02142 MGS-like domain LK428_RS06625 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LK428_RS06625 PF00117 Glutamine amidotransferase class-I LK428_RS06630 PF00923 Transaldolase/Fructose-6-phosphate aldolase LK428_RS06650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK428_RS06650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LK428_RS06655 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS06660 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS06660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS06660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS06665 PF03658 RnfH family Ubiquitin LK428_RS06670 PF03364 Polyketide cyclase / dehydrase and lipid transport LK428_RS06675 PF01668 SmpB protein LK428_RS06680 PF08448 PAS fold LK428_RS06680 PF00990 Diguanylate cyclase, GGDEF domain LK428_RS06685 PF01145 SPFH domain / Band 7 family LK428_RS06685 PF16200 C-terminal region of band_7 LK428_RS06700 PF00958 GMP synthase C terminal domain LK428_RS06700 PF00117 Glutamine amidotransferase class-I LK428_RS06705 PF00391 PEP-utilising enzyme, mobile domain LK428_RS06705 PF02896 PEP-utilising enzyme, TIM barrel domain LK428_RS06705 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LK428_RS06710 PF03618 Kinase/pyrophosphorylase LK428_RS06715 PF08032 RNA 2'-O ribose methyltransferase substrate binding LK428_RS06715 PF00588 SpoU rRNA Methylase family LK428_RS06720 PF01351 Ribonuclease HII LK428_RS06725 PF02684 Lipid-A-disaccharide synthetase LK428_RS06730 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LK428_RS06730 PF00132 Bacterial transferase hexapeptide (six repeats) LK428_RS06735 PF07977 FabA-like domain LK428_RS06740 PF00132 Bacterial transferase hexapeptide (six repeats) LK428_RS06740 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LK428_RS06745 PF03938 Outer membrane protein (OmpH-like) LK428_RS06750 PF07244 Surface antigen variable number repeat LK428_RS06750 PF01103 Surface antigen LK428_RS06755 PF02163 Peptidase family M50 LK428_RS06755 PF17820 PDZ domain LK428_RS06760 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LK428_RS06760 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LK428_RS06760 PF13288 DXP reductoisomerase C-terminal domain LK428_RS06770 PF01255 Putative undecaprenyl diphosphate synthase LK428_RS06775 PF01765 Ribosome recycling factor LK428_RS06780 PF00696 Amino acid kinase family LK428_RS06785 PF00889 Elongation factor TS LK428_RS06790 PF00318 Ribosomal protein S2 LK428_RS06795 PF00557 Metallopeptidase family M24 LK428_RS06800 PF08335 GlnD PII-uridylyltransferase LK428_RS06800 PF01909 Nucleotidyltransferase domain LK428_RS06800 PF01966 HD domain LK428_RS06815 PF00156 Phosphoribosyl transferase domain LK428_RS06830 PF02875 Mur ligase family, glutamate ligase domain LK428_RS06830 PF08245 Mur ligase middle domain LK428_RS06840 PF07196 Flagellin hook IN motif LK428_RS06840 PF07195 Flagellar hook-associated protein 2 C-terminus LK428_RS06840 PF02465 Flagellar hook-associated protein 2 N-terminus LK428_RS06845 PF02561 Flagellar protein FliS LK428_RS06865 PF01312 FlhB HrpN YscU SpaS Family LK428_RS06875 PF02049 Flagellar hook-basal body complex protein FliE LK428_RS06880 PF08345 Flagellar M-ring protein C-terminal LK428_RS06880 PF01514 Secretory protein of YscJ/FliF family LK428_RS06885 PF14842 FliG N-terminal domain LK428_RS06885 PF14841 FliG middle domain LK428_RS06885 PF01706 FliG C-terminal domain LK428_RS06895 PF18269 T3SS EscN ATPase C-terminal domain LK428_RS06895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK428_RS06910 PF03748 Flagellar basal body-associated protein FliL LK428_RS06915 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LK428_RS06915 PF02154 Flagellar motor switch protein FliM LK428_RS06920 PF16973 Flagellar motor switch protein FliN N-terminal LK428_RS06920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LK428_RS06925 PF04347 Flagellar biosynthesis protein, FliO LK428_RS06930 PF00813 FliP family LK428_RS06935 PF01313 Bacterial export proteins, family 3 LK428_RS06940 PF01311 Bacterial export proteins, family 1 LK428_RS06990 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LK428_RS06990 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LK428_RS06995 PF03466 LysR substrate binding domain LK428_RS06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS07005 PF12794 Mechanosensitive ion channel inner membrane domain 1 LK428_RS07005 PF12795 Mechanosensitive ion channel porin domain LK428_RS07005 PF00924 Mechanosensitive ion channel LK428_RS07025 PF01925 Sulfite exporter TauE/SafE LK428_RS07030 PF00892 EamA-like transporter family LK428_RS07055 PF11791 Aconitate B N-terminal domain LK428_RS07055 PF06434 Aconitate hydratase 2 N-terminus LK428_RS07055 PF00330 Aconitase family (aconitate hydratase) LK428_RS07065 PF00691 OmpA family LK428_RS07080 PF00593 TonB dependent receptor LK428_RS07080 PF07715 TonB-dependent Receptor Plug Domain LK428_RS07090 PF00694 Aconitase C-terminal domain LK428_RS07090 PF00330 Aconitase family (aconitate hydratase) LK428_RS07095 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LK428_RS07110 PF01132 Elongation factor P (EF-P) OB domain LK428_RS07110 PF08207 Elongation factor P (EF-P) KOW-like domain LK428_RS07110 PF09285 Elongation factor P, C-terminal LK428_RS07115 PF00034 Cytochrome c LK428_RS07125 PF04542 Sigma-70 region 2 LK428_RS07125 PF08281 Sigma-70, region 4 LK428_RS07140 PF02954 Bacterial regulatory protein, Fis family LK428_RS07140 PF00072 Response regulator receiver domain LK428_RS07140 PF00158 Sigma-54 interaction domain LK428_RS07180 PF00263 Bacterial type II and III secretion system protein LK428_RS07180 PF04972 BON domain LK428_RS07180 PF13629 Pilus formation protein N terminal region LK428_RS07210 PF03707 Bacterial signalling protein N terminal repeat LK428_RS07210 PF00990 Diguanylate cyclase, GGDEF domain LK428_RS07210 PF00563 EAL domain LK428_RS07215 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LK428_RS07215 PF08479 POTRA domain, ShlB-type LK428_RS07225 PF01047 MarR family LK428_RS07230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS07230 PF00005 ABC transporter LK428_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS07235 PF12911 N-terminal TM domain of oligopeptide transport permease C LK428_RS07240 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS07245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS07255 PF01544 CorA-like Mg2+ transporter protein LK428_RS07260 PF00580 UvrD/REP helicase N-terminal domain LK428_RS07260 PF13361 UvrD-like helicase C-terminal domain LK428_RS07275 PF00202 Aminotransferase class-III LK428_RS07280 PF00171 Aldehyde dehydrogenase family LK428_RS07285 PF00459 Inositol monophosphatase family LK428_RS07295 PF02146 Sir2 family LK428_RS07305 PF00132 Bacterial transferase hexapeptide (six repeats) LK428_RS07310 PF00342 Phosphoglucose isomerase LK428_RS07315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK428_RS07315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK428_RS07315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK428_RS07315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK428_RS07325 PF00072 Response regulator receiver domain LK428_RS07325 PF00196 Bacterial regulatory proteins, luxR family LK428_RS07335 PF09317 Domain of unknown function (DUF1974) LK428_RS07335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS07335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS07335 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS07340 PF02803 Thiolase, C-terminal domain LK428_RS07340 PF00108 Thiolase, N-terminal domain LK428_RS07345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS07345 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS07345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS07355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS07355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS07355 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS07360 PF00108 Thiolase, N-terminal domain LK428_RS07360 PF02803 Thiolase, C-terminal domain LK428_RS07380 PF13458 Periplasmic binding protein LK428_RS07390 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS07390 PF00005 ABC transporter LK428_RS07395 PF00005 ABC transporter LK428_RS07400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LK428_RS07400 PF00034 Cytochrome c LK428_RS07400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK428_RS07410 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS07410 PF01799 [2Fe-2S] binding domain LK428_RS07415 PF01494 FAD binding domain LK428_RS07420 PF17645 Arylmalonate decarboxylase LK428_RS07435 PF00857 Isochorismatase family LK428_RS07450 PF00970 Oxidoreductase FAD-binding domain LK428_RS07450 PF00042 Globin LK428_RS07450 PF00175 Oxidoreductase NAD-binding domain LK428_RS07455 PF07715 TonB-dependent Receptor Plug Domain LK428_RS07455 PF00593 TonB dependent receptor LK428_RS07465 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS07490 PF12802 MarR family LK428_RS07510 PF14883 Hypothetical glycosyl hydrolase family 13 LK428_RS07510 PF01522 Polysaccharide deacetylase LK428_RS07515 PF00535 Glycosyl transferase family 2 LK428_RS07525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK428_RS07550 PF01042 Endoribonuclease L-PSP LK428_RS07555 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS07560 PF13380 CoA binding domain LK428_RS07565 PF01614 Bacterial transcriptional regulator LK428_RS07565 PF09339 IclR helix-turn-helix domain LK428_RS07570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK428_RS07570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS07580 PF00005 ABC transporter LK428_RS07580 PF08402 TOBE domain LK428_RS07585 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS07605 PF03466 LysR substrate binding domain LK428_RS07620 PF01958 Domain of unknown function DUF108 LK428_RS07620 PF03447 Homoserine dehydrogenase, NAD binding domain LK428_RS07625 PF00561 alpha/beta hydrolase fold LK428_RS07630 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS07635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS07640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LK428_RS07640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS07645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS07645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS07670 PF13840 ACT domain LK428_RS07670 PF00696 Amino acid kinase family LK428_RS07670 PF01842 ACT domain LK428_RS07675 PF01171 PP-loop family LK428_RS07675 PF09179 TilS substrate binding domain LK428_RS07685 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LK428_RS07690 PF02805 Metal binding domain of Ada LK428_RS07690 PF06029 AlkA N-terminal domain LK428_RS07690 PF00730 HhH-GPD superfamily base excision DNA repair protein LK428_RS07690 PF12833 Helix-turn-helix domain LK428_RS07695 PF09190 DALR domain LK428_RS07695 PF01406 tRNA synthetases class I (C) catalytic domain LK428_RS07705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LK428_RS07710 PF00149 Calcineurin-like phosphoesterase LK428_RS07715 PF02673 Bacitracin resistance protein BacA LK428_RS07720 PF03471 Transporter associated domain LK428_RS07720 PF03741 Integral membrane protein TerC family LK428_RS07725 PF00459 Inositol monophosphatase family LK428_RS07730 PF00588 SpoU rRNA Methylase family LK428_RS07735 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS07745 PF00924 Mechanosensitive ion channel LK428_RS07745 PF05552 Conserved TM helix LK428_RS07755 PF00890 FAD binding domain LK428_RS07760 PF03466 LysR substrate binding domain LK428_RS07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS07775 PF00890 FAD binding domain LK428_RS07795 PF00166 Chaperonin 10 Kd subunit LK428_RS07800 PF00118 TCP-1/cpn60 chaperonin family LK428_RS07805 PF03797 Autotransporter beta-domain LK428_RS07805 PF03212 Pertactin LK428_RS07810 PF03631 Virulence factor BrkB LK428_RS07815 PF01219 Prokaryotic diacylglycerol kinase LK428_RS07820 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS07825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LK428_RS07830 PF00994 Probable molybdopterin binding domain LK428_RS07830 PF18146 Damage-inducible protein CinA KH domain LK428_RS07830 PF02464 Competence-damaged protein LK428_RS07835 PF04608 Phosphatidylglycerophosphatase A LK428_RS07840 PF00586 AIR synthase related protein, N-terminal domain LK428_RS07840 PF02769 AIR synthase related protein, C-terminal domain LK428_RS07845 PF01029 NusB family LK428_RS07850 PF00885 6,7-dimethyl-8-ribityllumazine synthase LK428_RS07855 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LK428_RS07855 PF00925 GTP cyclohydrolase II LK428_RS07875 PF00005 ABC transporter LK428_RS07880 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS07900 PF02881 SRP54-type protein, helical bundle domain LK428_RS07900 PF00448 SRP54-type protein, GTPase domain LK428_RS07910 PF01467 Cytidylyltransferase-like LK428_RS07915 PF00037 4Fe-4S binding domain LK428_RS07920 PF03594 Benzoate membrane transport protein LK428_RS07935 PF01022 Bacterial regulatory protein, arsR family LK428_RS07950 PF03466 LysR substrate binding domain LK428_RS07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS07965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS07970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS07970 PF00005 ABC transporter LK428_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS07980 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS07990 PF01515 Phosphate acetyl/butaryl transferase LK428_RS07990 PF03949 Malic enzyme, NAD binding domain LK428_RS07990 PF00390 Malic enzyme, N-terminal domain LK428_RS07995 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LK428_RS08000 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS08005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS08005 PF00205 Thiamine pyrophosphate enzyme, central domain LK428_RS08005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS08010 PF07729 FCD domain LK428_RS08010 PF00392 Bacterial regulatory proteins, gntR family LK428_RS08030 PF03797 Autotransporter beta-domain LK428_RS08040 PF13396 Phospholipase_D-nuclease N-terminal LK428_RS08040 PF13091 PLD-like domain LK428_RS08045 PF01740 STAS domain LK428_RS08050 PF13581 Histidine kinase-like ATPase domain LK428_RS08055 PF00842 Alanine racemase, C-terminal domain LK428_RS08055 PF01168 Alanine racemase, N-terminal domain LK428_RS08075 PF00672 HAMP domain LK428_RS08075 PF07228 Stage II sporulation protein E (SpoIIE) LK428_RS08100 PF04542 Sigma-70 region 2 LK428_RS08100 PF08281 Sigma-70, region 4 LK428_RS08105 PF00263 Bacterial type II and III secretion system protein LK428_RS08105 PF03958 Bacterial type II/III secretion system short domain LK428_RS08115 PF01312 FlhB HrpN YscU SpaS Family LK428_RS08120 PF01311 Bacterial export proteins, family 1 LK428_RS08125 PF01313 Bacterial export proteins, family 3 LK428_RS08130 PF00813 FliP family LK428_RS08135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LK428_RS08150 PF18269 T3SS EscN ATPase C-terminal domain LK428_RS08150 PF02874 ATP synthase alpha/beta family, beta-barrel domain LK428_RS08150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK428_RS08155 PF02108 Flagellar assembly protein FliH LK428_RS08165 PF01514 Secretory protein of YscJ/FliF family LK428_RS08230 PF00771 FHIPEP family LK428_RS08275 PF00860 Permease family LK428_RS08280 PF00672 HAMP domain LK428_RS08280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK428_RS08280 PF02203 Tar ligand binding domain homologue LK428_RS08285 PF01272 Transcription elongation factor, GreA/GreB, C-term LK428_RS08285 PF03449 Transcription elongation factor, N-terminal LK428_RS08305 PF13419 Haloacid dehalogenase-like hydrolase LK428_RS08310 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS08315 PF08402 TOBE domain LK428_RS08315 PF00005 ABC transporter LK428_RS08320 PF03466 LysR substrate binding domain LK428_RS08320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS08330 PF00581 Rhodanese-like domain LK428_RS08340 PF01435 Peptidase family M48 LK428_RS08345 PF00107 Zinc-binding dehydrogenase LK428_RS08345 PF08240 Alcohol dehydrogenase GroES-like domain LK428_RS08350 PF00892 EamA-like transporter family LK428_RS08360 PF01047 MarR family LK428_RS08370 PF02321 Outer membrane efflux protein LK428_RS08380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK428_RS08380 PF00529 HlyD membrane-fusion protein of T1SS LK428_RS08385 PF07690 Major Facilitator Superfamily LK428_RS08390 PF00180 Isocitrate/isopropylmalate dehydrogenase LK428_RS08395 PF00392 Bacterial regulatory proteins, gntR family LK428_RS08395 PF00155 Aminotransferase class I and II LK428_RS08400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS08405 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS08410 PF12911 N-terminal TM domain of oligopeptide transport permease C LK428_RS08410 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS08415 PF00005 ABC transporter LK428_RS08415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS08430 PF00202 Aminotransferase class-III LK428_RS08435 PF07883 Cupin domain LK428_RS08440 PF00850 Histone deacetylase domain LK428_RS08445 PF07687 Peptidase dimerisation domain LK428_RS08445 PF01546 Peptidase family M20/M25/M40 LK428_RS08455 PF00171 Aldehyde dehydrogenase family LK428_RS08460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK428_RS08465 PF00202 Aminotransferase class-III LK428_RS08470 PF01235 Sodium:alanine symporter family LK428_RS08475 PF05872 Bacterial protein of unknown function (DUF853) LK428_RS08480 PF01709 Transcriptional regulator LK428_RS08485 PF02844 Phosphoribosylglycinamide synthetase, N domain LK428_RS08485 PF02843 Phosphoribosylglycinamide synthetase, C domain LK428_RS08485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LK428_RS08490 PF01218 Coproporphyrinogen III oxidase LK428_RS08495 PF01467 Cytidylyltransferase-like LK428_RS08505 PF02590 Predicted SPOUT methyltransferase LK428_RS08510 PF02545 Maf-like protein LK428_RS08515 PF03797 Autotransporter beta-domain LK428_RS08515 PF03212 Pertactin LK428_RS08550 PF10150 Ribonuclease E/G family LK428_RS08550 PF00575 S1 RNA binding domain LK428_RS08555 PF00800 Prephenate dehydratase LK428_RS08555 PF01842 ACT domain LK428_RS08565 PF07690 Major Facilitator Superfamily LK428_RS08570 PF00005 ABC transporter LK428_RS08570 PF00664 ABC transporter transmembrane region LK428_RS08575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LK428_RS08585 PF03692 Putative zinc- or iron-chelating domain LK428_RS08625 PF01569 PAP2 superfamily LK428_RS08635 PF00781 Diacylglycerol kinase catalytic domain LK428_RS08645 PF02028 BCCT, betaine/carnitine/choline family transporter LK428_RS08655 PF01638 HxlR-like helix-turn-helix LK428_RS08660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK428_RS08665 PF00873 AcrB/AcrD/AcrF family LK428_RS08670 PF02321 Outer membrane efflux protein LK428_RS08680 PF00127 Copper binding proteins, plastocyanin/azurin family LK428_RS08690 PF05378 Hydantoinase/oxoprolinase N-terminal region LK428_RS08690 PF01968 Hydantoinase/oxoprolinase LK428_RS08700 PF01266 FAD dependent oxidoreductase LK428_RS08705 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS08720 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LK428_RS08725 PF01053 Cys/Met metabolism PLP-dependent enzyme LK428_RS08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS08730 PF03466 LysR substrate binding domain LK428_RS08745 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS08750 PF14698 Argininosuccinate lyase C-terminal LK428_RS08750 PF00206 Lyase LK428_RS08760 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS08765 PF05034 Methylaspartate ammonia-lyase N-terminus LK428_RS08765 PF07476 Methylaspartate ammonia-lyase C-terminus LK428_RS08775 PF02028 BCCT, betaine/carnitine/choline family transporter LK428_RS08785 PF03840 Preprotein translocase SecG subunit LK428_RS08790 PF00121 Triosephosphate isomerase LK428_RS08795 PF16197 Ketoacyl-synthetase C-terminal extension LK428_RS08795 PF14765 Polyketide synthase dehydratase LK428_RS08795 PF00550 Phosphopantetheine attachment site LK428_RS08795 PF08659 KR domain LK428_RS08795 PF08990 Erythronolide synthase docking LK428_RS08795 PF00109 Beta-ketoacyl synthase, N-terminal domain LK428_RS08795 PF02801 Beta-ketoacyl synthase, C-terminal domain LK428_RS08795 PF08240 Alcohol dehydrogenase GroES-like domain LK428_RS08795 PF00698 Acyl transferase domain LK428_RS08810 PF13291 ACT domain LK428_RS08810 PF00291 Pyridoxal-phosphate dependent enzyme LK428_RS08830 PF02104 SURF1 family LK428_RS08835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LK428_RS08840 PF00510 Cytochrome c oxidase subunit III LK428_RS08845 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK428_RS08855 PF07690 Major Facilitator Superfamily LK428_RS08855 PF00083 Sugar (and other) transporter LK428_RS08875 PF04380 Membrane fusogenic activity LK428_RS08880 PF00543 Nitrogen regulatory protein P-II LK428_RS08895 PF00440 Bacterial regulatory proteins, tetR family LK428_RS08900 PF07690 Major Facilitator Superfamily LK428_RS08905 PF00005 ABC transporter LK428_RS08910 PF00005 ABC transporter LK428_RS08910 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS08915 PF11862 Domain of unknown function (DUF3382) LK428_RS08915 PF02653 Branched-chain amino acid transport system / permease component LK428_RS08920 PF02653 Branched-chain amino acid transport system / permease component LK428_RS08925 PF13458 Periplasmic binding protein LK428_RS08940 PF00171 Aldehyde dehydrogenase family LK428_RS08940 PF01619 Proline dehydrogenase LK428_RS08940 PF14850 DNA-binding domain of Proline dehydrogenase LK428_RS08940 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LK428_RS08950 PF02470 MlaD protein LK428_RS08955 PF04403 Paraquat-inducible protein A LK428_RS08960 PF17871 AAA lid domain LK428_RS08960 PF00004 ATPase family associated with various cellular activities (AAA) LK428_RS08960 PF07724 AAA domain (Cdc48 subfamily) LK428_RS08960 PF02861 Clp amino terminal domain, pathogenicity island component LK428_RS08960 PF10431 C-terminal, D2-small domain, of ClpB protein LK428_RS08965 PF00912 Transglycosylase LK428_RS08965 PF06832 Penicillin-Binding Protein C-terminus Family LK428_RS08965 PF00905 Penicillin binding protein transpeptidase domain LK428_RS08970 PF00207 Alpha-2-macroglobulin family LK428_RS08970 PF07703 Alpha-2-macroglobulin bait region domain LK428_RS08970 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LK428_RS08970 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LK428_RS08970 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LK428_RS08970 PF17962 Bacterial macroglobulin domain 6 LK428_RS08970 PF01835 MG2 domain LK428_RS08970 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LK428_RS08975 PF02617 ATP-dependent Clp protease adaptor protein ClpS LK428_RS08980 PF00313 'Cold-shock' DNA-binding domain LK428_RS08990 PF00108 Thiolase, N-terminal domain LK428_RS08990 PF02803 Thiolase, C-terminal domain LK428_RS08995 PF00654 Voltage gated chloride channel LK428_RS09000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LK428_RS09000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LK428_RS09005 PF13742 OB-fold nucleic acid binding domain LK428_RS09005 PF02601 Exonuclease VII, large subunit LK428_RS09020 PF03328 HpcH/HpaI aldolase/citrate lyase family LK428_RS09025 PF01649 Ribosomal protein S20 LK428_RS09035 PF03023 Lipid II flippase MurJ LK428_RS09040 PF00106 short chain dehydrogenase LK428_RS09045 PF05191 Adenylate kinase, active site lid LK428_RS09050 PF02348 Cytidylyltransferase LK428_RS09055 PF03966 Trm112p-like protein LK428_RS09060 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LK428_RS09065 PF02472 Biopolymer transport protein ExbD/TolR LK428_RS09070 PF01618 MotA/TolQ/ExbB proton channel family LK428_RS09090 PF02615 Malate/L-lactate dehydrogenase LK428_RS09110 PF00291 Pyridoxal-phosphate dependent enzyme LK428_RS09110 PF14821 Threonine synthase N terminus LK428_RS09115 PF01842 ACT domain LK428_RS09115 PF03447 Homoserine dehydrogenase, NAD binding domain LK428_RS09115 PF00742 Homoserine dehydrogenase LK428_RS09120 PF00155 Aminotransferase class I and II LK428_RS09125 PF04430 Protein of unknown function (DUF498/DUF598) LK428_RS09130 PF00578 AhpC/TSA family LK428_RS09135 PF13638 PIN domain LK428_RS09135 PF02562 PhoH-like protein LK428_RS09140 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LK428_RS09145 PF13593 SBF-like CPA transporter family (DUF4137) LK428_RS09150 PF00772 DnaB-like helicase N terminal domain LK428_RS09150 PF03796 DnaB-like helicase C terminal domain LK428_RS09160 PF03948 Ribosomal protein L9, C-terminal domain LK428_RS09160 PF01281 Ribosomal protein L9, N-terminal domain LK428_RS09165 PF01084 Ribosomal protein S18 LK428_RS09175 PF01250 Ribosomal protein S6 LK428_RS09180 PF02649 Type I GTP cyclohydrolase folE2 LK428_RS09185 PF02780 Transketolase, C-terminal domain LK428_RS09185 PF02779 Transketolase, pyrimidine binding domain LK428_RS09185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LK428_RS09190 PF00348 Polyprenyl synthetase LK428_RS09195 PF02609 Exonuclease VII small subunit LK428_RS09205 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS09225 PF13673 Acetyltransferase (GNAT) domain LK428_RS09240 PF01070 FMN-dependent dehydrogenase LK428_RS09250 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS09255 PF01425 Amidase LK428_RS09260 PF01614 Bacterial transcriptional regulator LK428_RS09260 PF09339 IclR helix-turn-helix domain LK428_RS09265 PF00204 DNA gyrase B LK428_RS09265 PF18053 DNA gyrase B subunit insert domain LK428_RS09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS09265 PF01751 Toprim domain LK428_RS09265 PF00986 DNA gyrase B subunit, carboxyl terminus LK428_RS09270 PF00712 DNA polymerase III beta subunit, N-terminal domain LK428_RS09270 PF02767 DNA polymerase III beta subunit, central domain LK428_RS09270 PF02768 DNA polymerase III beta subunit, C-terminal domain LK428_RS09275 PF00308 Bacterial dnaA protein LK428_RS09275 PF08299 Bacterial dnaA protein helix-turn-helix LK428_RS09275 PF11638 DnaA N-terminal domain LK428_RS09280 PF00468 Ribosomal protein L34 LK428_RS09285 PF00825 Ribonuclease P LK428_RS09290 PF01809 Putative membrane protein insertion efficiency factor LK428_RS09295 PF02096 60Kd inner membrane protein LK428_RS09295 PF14849 YidC periplasmic domain LK428_RS09315 PF03466 LysR substrate binding domain LK428_RS09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS09325 PF00392 Bacterial regulatory proteins, gntR family LK428_RS09325 PF07702 UTRA domain LK428_RS09355 PF01774 UreD urease accessory protein LK428_RS09360 PF00547 Urease, gamma subunit LK428_RS09365 PF04955 HupE / UreJ protein LK428_RS09370 PF00699 Urease beta subunit LK428_RS09375 PF01979 Amidohydrolase family LK428_RS09375 PF00449 Urease alpha-subunit, N-terminal domain LK428_RS09380 PF02814 UreE urease accessory protein, N-terminal domain LK428_RS09380 PF05194 UreE urease accessory protein, C-terminal domain LK428_RS09390 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK428_RS09405 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS09410 PF02515 CoA-transferase family III LK428_RS09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS09420 PF03466 LysR substrate binding domain LK428_RS09425 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS09435 PF10415 Fumarase C C-terminus LK428_RS09435 PF00206 Lyase LK428_RS09440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LK428_RS09445 PF01520 N-acetylmuramoyl-L-alanine amidase LK428_RS09445 PF11741 AMIN domain LK428_RS09450 PF09335 SNARE associated Golgi protein LK428_RS09455 PF01119 DNA mismatch repair protein, C-terminal domain LK428_RS09455 PF08676 MutL C terminal dimerisation domain LK428_RS09465 PF02769 AIR synthase related protein, C-terminal domain LK428_RS09465 PF00586 AIR synthase related protein, N-terminal domain LK428_RS09470 PF00308 Bacterial dnaA protein LK428_RS09480 PF01743 Poly A polymerase head domain LK428_RS09480 PF12627 Probable RNA and SrmB- binding site of polymerase A LK428_RS09480 PF12626 Polymerase A arginine-rich C-terminus LK428_RS09485 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LK428_RS09490 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS09500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS09505 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS09510 PF07702 UTRA domain LK428_RS09510 PF00392 Bacterial regulatory proteins, gntR family LK428_RS09515 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LK428_RS09515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK428_RS09525 PF02627 Carboxymuconolactone decarboxylase family LK428_RS09550 PF09518 HindIII restriction endonuclease LK428_RS09555 PF07549 SecD/SecF GG Motif LK428_RS09555 PF02355 Protein export membrane protein LK428_RS09560 PF13667 ThiC-associated domain LK428_RS09560 PF01964 Radical SAM ThiC family LK428_RS09565 PF00171 Aldehyde dehydrogenase family LK428_RS09570 PF01565 FAD binding domain LK428_RS09570 PF02913 FAD linked oxidases, C-terminal domain LK428_RS09595 PF01654 Cytochrome bd terminal oxidase subunit I LK428_RS09600 PF02322 Cytochrome bd terminal oxidase subunit II LK428_RS09605 PF08173 Membrane bound YbgT-like protein LK428_RS09610 PF00005 ABC transporter LK428_RS09610 PF00664 ABC transporter transmembrane region LK428_RS09615 PF00664 ABC transporter transmembrane region LK428_RS09615 PF00005 ABC transporter LK428_RS09620 PF00156 Phosphoribosyl transferase domain LK428_RS09650 PF00291 Pyridoxal-phosphate dependent enzyme LK428_RS09650 PF00585 C-terminal regulatory domain of Threonine dehydratase LK428_RS09665 PF00392 Bacterial regulatory proteins, gntR family LK428_RS09665 PF07729 FCD domain LK428_RS09670 PF02515 CoA-transferase family III LK428_RS09680 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS09690 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS09705 PF03746 LamB/YcsF family LK428_RS09710 PF02626 Carboxyltransferase domain, subdomain A and B LK428_RS09715 PF02682 Carboxyltransferase domain, subdomain C and D LK428_RS09725 PF03466 LysR substrate binding domain LK428_RS09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS09730 PF01842 ACT domain LK428_RS09730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK428_RS09730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK428_RS09740 PF00672 HAMP domain LK428_RS09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS09740 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS09745 PF00072 Response regulator receiver domain LK428_RS09745 PF00486 Transcriptional regulatory protein, C terminal LK428_RS09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS09750 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS09750 PF00989 PAS fold LK428_RS09750 PF11808 Phosphate regulon sensor protein PhoR LK428_RS09755 PF00486 Transcriptional regulatory protein, C terminal LK428_RS09755 PF00072 Response regulator receiver domain LK428_RS09760 PF01209 ubiE/COQ5 methyltransferase family LK428_RS09775 PF03109 ABC1 family LK428_RS09800 PF03466 LysR substrate binding domain LK428_RS09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS09810 PF00309 Sigma-54 factor, Activator interacting domain (AID) LK428_RS09810 PF04963 Sigma-54 factor, core binding domain LK428_RS09810 PF04552 Sigma-54, DNA binding domain LK428_RS09820 PF08502 LeuA allosteric (dimerisation) domain LK428_RS09820 PF00682 HMGL-like LK428_RS09825 PF01425 Amidase LK428_RS09835 PF00356 Bacterial regulatory proteins, lacI family LK428_RS09850 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS09855 PF00005 ABC transporter LK428_RS09855 PF12857 TOBE-like domain LK428_RS09865 PF02254 TrkA-N domain LK428_RS09865 PF07885 Ion channel LK428_RS09875 PF01594 AI-2E family transporter LK428_RS09885 PF01467 Cytidylyltransferase-like LK428_RS09890 PF02321 Outer membrane efflux protein LK428_RS09900 PF08543 Phosphomethylpyrimidine kinase LK428_RS09905 PF05690 Thiazole biosynthesis protein ThiG LK428_RS09910 PF01497 Periplasmic binding protein LK428_RS09915 PF07715 TonB-dependent Receptor Plug Domain LK428_RS09915 PF00593 TonB dependent receptor LK428_RS09920 PF02607 B12 binding domain LK428_RS09920 PF02310 B12 binding domain LK428_RS09920 PF02965 Vitamin B12 dependent methionine synthase, activation domain LK428_RS09920 PF02574 Homocysteine S-methyltransferase LK428_RS09920 PF00809 Pterin binding enzyme LK428_RS09930 PF00356 Bacterial regulatory proteins, lacI family LK428_RS09935 PF02653 Branched-chain amino acid transport system / permease component LK428_RS09945 PF00005 ABC transporter LK428_RS09945 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS09950 PF00005 ABC transporter LK428_RS09955 PF13458 Periplasmic binding protein LK428_RS09960 PF01425 Amidase LK428_RS09965 PF05995 Cysteine dioxygenase type I LK428_RS09970 PF09339 IclR helix-turn-helix domain LK428_RS09970 PF01614 Bacterial transcriptional regulator LK428_RS09975 PF02515 CoA-transferase family III LK428_RS09980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS09980 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS09980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS09985 PF05275 Copper resistance protein B precursor (CopB) LK428_RS09990 PF00394 Multicopper oxidase LK428_RS09990 PF07731 Multicopper oxidase LK428_RS09990 PF07732 Multicopper oxidase LK428_RS10010 PF03466 LysR substrate binding domain LK428_RS10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS10015 PF02321 Outer membrane efflux protein LK428_RS10020 PF13533 Biotin-lipoyl like LK428_RS10025 PF03412 Peptidase C39 family LK428_RS10025 PF00664 ABC transporter transmembrane region LK428_RS10025 PF00005 ABC transporter LK428_RS10030 PF03497 Anthrax toxin LF subunit LK428_RS10030 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LK428_RS10030 PF02382 N-terminal domain in RTX protein LK428_RS10040 PF02794 RTX toxin acyltransferase family LK428_RS10045 PF00171 Aldehyde dehydrogenase family LK428_RS10055 PF00005 ABC transporter LK428_RS10075 PF00571 CBS domain LK428_RS10075 PF01380 SIS domain LK428_RS10080 PF02222 ATP-grasp domain LK428_RS10080 PF01370 NAD dependent epimerase/dehydratase family LK428_RS10085 PF07715 TonB-dependent Receptor Plug Domain LK428_RS10085 PF00593 TonB dependent receptor LK428_RS10115 PF02938 GAD domain LK428_RS10115 PF00152 tRNA synthetases class II (D, K and N) LK428_RS10115 PF01336 OB-fold nucleic acid binding domain LK428_RS10120 PF03372 Endonuclease/Exonuclease/phosphatase family LK428_RS10125 PF13091 PLD-like domain LK428_RS10165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LK428_RS10175 PF01062 Bestrophin, RFP-TM, chloride channel LK428_RS10180 PF01037 Lrp/AsnC ligand binding domain LK428_RS10185 PF00205 Thiamine pyrophosphate enzyme, central domain LK428_RS10185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS10185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS10195 PF00171 Aldehyde dehydrogenase family LK428_RS10205 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS10210 PF00005 ABC transporter LK428_RS10220 PF01131 DNA topoisomerase LK428_RS10220 PF01751 Toprim domain LK428_RS10230 PF00749 tRNA synthetases class I (E and Q), catalytic domain LK428_RS10235 PF04361 Protein of unknown function (DUF494) LK428_RS10240 PF07715 TonB-dependent Receptor Plug Domain LK428_RS10240 PF00593 TonB dependent receptor LK428_RS10250 PF16868 NMT1-like family LK428_RS10255 PF01168 Alanine racemase, N-terminal domain LK428_RS10255 PF14031 Putative serine dehydratase domain LK428_RS10260 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS10265 PF00202 Aminotransferase class-III LK428_RS10275 PF02785 Biotin carboxylase C-terminal domain LK428_RS10275 PF00289 Biotin carboxylase, N-terminal domain LK428_RS10275 PF00364 Biotin-requiring enzyme LK428_RS10275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK428_RS10280 PF01039 Carboxyl transferase domain LK428_RS10290 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LK428_RS10305 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) LK428_RS10310 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation LK428_RS10310 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK428_RS10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS10315 PF03466 LysR substrate binding domain LK428_RS10320 PF07690 Major Facilitator Superfamily LK428_RS10325 PF00920 Dehydratase family LK428_RS10330 PF12833 Helix-turn-helix domain LK428_RS10335 PF00682 HMGL-like LK428_RS10335 PF08502 LeuA allosteric (dimerisation) domain LK428_RS10345 PF07859 alpha/beta hydrolase fold LK428_RS10350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS10355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK428_RS10360 PF04299 Putative FMN-binding domain LK428_RS10380 PF06508 Queuosine biosynthesis protein QueC LK428_RS10390 PF03797 Autotransporter beta-domain LK428_RS10390 PF00082 Subtilase family LK428_RS10395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS10395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS10400 PF02667 Short chain fatty acid transporter LK428_RS10410 PF01614 Bacterial transcriptional regulator LK428_RS10410 PF09339 IclR helix-turn-helix domain LK428_RS10415 PF01144 Coenzyme A transferase LK428_RS10420 PF01144 Coenzyme A transferase LK428_RS10425 PF02426 Muconolactone delta-isomerase LK428_RS10435 PF12146 Serine aminopeptidase, S33 LK428_RS10465 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS10465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS10465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS10480 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS10485 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS10490 PF01256 Carbohydrate kinase LK428_RS10510 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS10515 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS10515 PF12911 N-terminal TM domain of oligopeptide transport permease C LK428_RS10530 PF07687 Peptidase dimerisation domain LK428_RS10530 PF01546 Peptidase family M20/M25/M40 LK428_RS10540 PF00580 UvrD/REP helicase N-terminal domain LK428_RS10540 PF13361 UvrD-like helicase C-terminal domain LK428_RS10545 PF00270 DEAD/DEAH box helicase LK428_RS10545 PF00271 Helicase conserved C-terminal domain LK428_RS10545 PF17764 3′ DNA-binding domain (3′BD) LK428_RS10545 PF18074 Primosomal protein N C-terminal domain LK428_RS10545 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LK428_RS10550 PF01208 Uroporphyrinogen decarboxylase (URO-D) LK428_RS10560 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LK428_RS10565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK428_RS10565 PF02874 ATP synthase alpha/beta family, beta-barrel domain LK428_RS10570 PF00231 ATP synthase LK428_RS10575 PF00306 ATP synthase alpha/beta chain, C terminal domain LK428_RS10575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK428_RS10575 PF02874 ATP synthase alpha/beta family, beta-barrel domain LK428_RS10580 PF00213 ATP synthase delta (OSCP) subunit LK428_RS10585 PF00430 ATP synthase B/B' CF(0) LK428_RS10590 PF00137 ATP synthase subunit C LK428_RS10595 PF00119 ATP synthase A chain LK428_RS10610 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS10615 PF13180 PDZ domain LK428_RS10615 PF17820 PDZ domain LK428_RS10620 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS10620 PF13192 Thioredoxin domain LK428_RS10630 PF01171 PP-loop family LK428_RS10650 PF07859 alpha/beta hydrolase fold LK428_RS10660 PF02653 Branched-chain amino acid transport system / permease component LK428_RS10665 PF02653 Branched-chain amino acid transport system / permease component LK428_RS10665 PF11862 Domain of unknown function (DUF3382) LK428_RS10670 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS10670 PF00005 ABC transporter LK428_RS10675 PF00005 ABC transporter LK428_RS10685 PF00106 short chain dehydrogenase LK428_RS10690 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS10695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS10695 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS10695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS10700 PF13193 AMP-binding enzyme C-terminal domain LK428_RS10700 PF00501 AMP-binding enzyme LK428_RS10720 PF00202 Aminotransferase class-III LK428_RS10725 PF02581 Thiamine monophosphate synthase LK428_RS10730 PF08543 Phosphomethylpyrimidine kinase LK428_RS10735 PF00301 Rubredoxin LK428_RS10740 PF02622 Uncharacterized ACR, COG1678 LK428_RS10745 PF03652 Holliday junction resolvase LK428_RS10750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LK428_RS10750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LK428_RS10760 PF01553 Acyltransferase LK428_RS10765 PF00149 Calcineurin-like phosphoesterase LK428_RS10775 PF00912 Transglycosylase LK428_RS10785 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS10795 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS10800 PF00005 ABC transporter LK428_RS10805 PF01063 Amino-transferase class IV LK428_RS10825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS10825 PF00205 Thiamine pyrophosphate enzyme, central domain LK428_RS10825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS10830 PF07729 FCD domain LK428_RS10830 PF00392 Bacterial regulatory proteins, gntR family LK428_RS10850 PF00753 Metallo-beta-lactamase superfamily LK428_RS10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS10855 PF03466 LysR substrate binding domain LK428_RS10865 PF01323 DSBA-like thioredoxin domain LK428_RS10885 PF00218 Indole-3-glycerol phosphate synthase LK428_RS10890 PF02885 Glycosyl transferase family, helical bundle domain LK428_RS10890 PF00591 Glycosyl transferase family, a/b domain LK428_RS10895 PF00117 Glutamine amidotransferase class-I LK428_RS10900 PF04715 Anthranilate synthase component I, N terminal region LK428_RS10900 PF00425 chorismate binding enzyme LK428_RS10905 PF13419 Haloacid dehalogenase-like hydrolase LK428_RS10910 PF00834 Ribulose-phosphate 3 epimerase family LK428_RS10915 PF04379 ApaG domain LK428_RS10920 PF03562 MltA specific insert domain LK428_RS10920 PF06725 3D domain LK428_RS10925 PF01494 FAD binding domain LK428_RS10930 PF10411 Disulfide bond isomerase protein N-terminus LK428_RS10930 PF13098 Thioredoxin-like domain LK428_RS10935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK428_RS10935 PF01842 ACT domain LK428_RS10935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK428_RS10945 PF02515 CoA-transferase family III LK428_RS10950 PF03466 LysR substrate binding domain LK428_RS10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS10960 PF02515 CoA-transferase family III LK428_RS10970 PF03466 LysR substrate binding domain LK428_RS10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS10975 PF01042 Endoribonuclease L-PSP LK428_RS10980 PF00042 Globin LK428_RS10980 PF00970 Oxidoreductase FAD-binding domain LK428_RS10980 PF00175 Oxidoreductase NAD-binding domain LK428_RS11005 PF03837 RecT family LK428_RS11035 PF00589 Phage integrase family LK428_RS11055 PF03466 LysR substrate binding domain LK428_RS11055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS11070 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS11080 PF02515 CoA-transferase family III LK428_RS11085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS11085 PF00205 Thiamine pyrophosphate enzyme, central domain LK428_RS11085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS11090 PF03466 LysR substrate binding domain LK428_RS11100 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS11110 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS11115 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS11120 PF13380 CoA binding domain LK428_RS11120 PF13607 Succinyl-CoA ligase like flavodoxin domain LK428_RS11125 PF02629 CoA binding domain LK428_RS11125 PF00549 CoA-ligase LK428_RS11130 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS11140 PF00392 Bacterial regulatory proteins, gntR family LK428_RS11140 PF07702 UTRA domain LK428_RS11145 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS11155 PF07702 UTRA domain LK428_RS11155 PF00392 Bacterial regulatory proteins, gntR family LK428_RS11160 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS11170 PF00005 ABC transporter LK428_RS11175 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS11180 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS11185 PF00550 Phosphopantetheine attachment site LK428_RS11185 PF00698 Acyl transferase domain LK428_RS11185 PF08240 Alcohol dehydrogenase GroES-like domain LK428_RS11185 PF08990 Erythronolide synthase docking LK428_RS11185 PF16197 Ketoacyl-synthetase C-terminal extension LK428_RS11185 PF00109 Beta-ketoacyl synthase, N-terminal domain LK428_RS11185 PF02801 Beta-ketoacyl synthase, C-terminal domain LK428_RS11185 PF14765 Polyketide synthase dehydratase LK428_RS11185 PF08659 KR domain LK428_RS11190 PF02515 CoA-transferase family III LK428_RS11195 PF00440 Bacterial regulatory proteins, tetR family LK428_RS11200 PF09297 NADH pyrophosphatase zinc ribbon domain LK428_RS11200 PF00293 NUDIX domain LK428_RS11205 PF00175 Oxidoreductase NAD-binding domain LK428_RS11205 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS11210 PF01425 Amidase LK428_RS11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS11220 PF03466 LysR substrate binding domain LK428_RS11225 PF13458 Periplasmic binding protein LK428_RS11235 PF00005 ABC transporter LK428_RS11245 PF02653 Branched-chain amino acid transport system / permease component LK428_RS11255 PF00355 Rieske [2Fe-2S] domain LK428_RS11270 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LK428_RS11270 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LK428_RS11280 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS11285 PF04391 Protein of unknown function (DUF533) LK428_RS11305 PF01476 LysM domain LK428_RS11305 PF01464 Transglycosylase SLT domain LK428_RS11310 PF16123 Hydroxyacylglutathione hydrolase C-terminus LK428_RS11310 PF00753 Metallo-beta-lactamase superfamily LK428_RS11320 PF00075 RNase H LK428_RS11335 PF03458 UPF0126 domain LK428_RS11340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LK428_RS11340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LK428_RS11345 PF03372 Endonuclease/Exonuclease/phosphatase family LK428_RS11350 PF00156 Phosphoribosyl transferase domain LK428_RS11355 PF02934 GatB/GatE catalytic domain LK428_RS11355 PF02637 GatB domain LK428_RS11360 PF01425 Amidase LK428_RS11365 PF02686 Glu-tRNAGln amidotransferase C subunit LK428_RS11375 PF04085 rod shape-determining protein MreC LK428_RS11385 PF03717 Penicillin-binding Protein dimerisation domain LK428_RS11385 PF00905 Penicillin binding protein transpeptidase domain LK428_RS11390 PF01098 Cell cycle protein LK428_RS11400 PF00939 Sodium:sulfate symporter transmembrane region LK428_RS11405 PF00440 Bacterial regulatory proteins, tetR family LK428_RS11415 PF00696 Amino acid kinase family LK428_RS11420 PF03180 NLPA lipoprotein LK428_RS11425 PF00578 AhpC/TSA family LK428_RS11430 PF04972 BON domain LK428_RS11435 PF13580 SIS domain LK428_RS11440 PF02021 Uncharacterised protein family UPF0102 LK428_RS11445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK428_RS11450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LK428_RS11450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LK428_RS11475 PF16363 GDP-mannose 4,6 dehydratase LK428_RS11480 PF04321 RmlD substrate binding domain LK428_RS11485 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LK428_RS11490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LK428_RS11490 PF04055 Radical SAM superfamily LK428_RS11495 PF03099 Biotin/lipoate A/B protein ligase family LK428_RS11500 PF04359 Protein of unknown function (DUF493) LK428_RS11505 PF01063 Amino-transferase class IV LK428_RS11510 PF00768 D-alanyl-D-alanine carboxypeptidase LK428_RS11510 PF07943 Penicillin-binding protein 5, C-terminal domain LK428_RS11535 PF00005 ABC transporter LK428_RS11540 PF02405 Permease MlaE LK428_RS11550 PF03309 Type III pantothenate kinase LK428_RS11560 PF00534 Glycosyl transferases group 1 LK428_RS11560 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LK428_RS11565 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LK428_RS11570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK428_RS11570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK428_RS11575 PF00132 Bacterial transferase hexapeptide (six repeats) LK428_RS11580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LK428_RS11585 PF02350 UDP-N-acetylglucosamine 2-epimerase LK428_RS11595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LK428_RS11600 PF02397 Bacterial sugar transferase LK428_RS11605 PF00534 Glycosyl transferases group 1 LK428_RS11605 PF00862 Sucrose synthase LK428_RS11610 PF10997 Alternate to MurJ LK428_RS11630 PF02719 Polysaccharide biosynthesis protein LK428_RS11645 PF00484 Carbonic anhydrase LK428_RS11650 PF01425 Amidase LK428_RS11655 PF13458 Periplasmic binding protein LK428_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS11660 PF03466 LysR substrate binding domain LK428_RS11665 PF02653 Branched-chain amino acid transport system / permease component LK428_RS11670 PF02653 Branched-chain amino acid transport system / permease component LK428_RS11675 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS11675 PF00005 ABC transporter LK428_RS11680 PF00005 ABC transporter LK428_RS11685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LK428_RS11685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LK428_RS11695 PF03180 NLPA lipoprotein LK428_RS11865 PF00970 Oxidoreductase FAD-binding domain LK428_RS11865 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS11865 PF00175 Oxidoreductase NAD-binding domain LK428_RS11875 PF00171 Aldehyde dehydrogenase family LK428_RS11895 PF00392 Bacterial regulatory proteins, gntR family LK428_RS11895 PF07729 FCD domain LK428_RS11905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS11905 PF09317 Domain of unknown function (DUF1974) LK428_RS11905 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS11905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS11910 PF07670 Nucleoside recognition LK428_RS11915 PF02887 Pyruvate kinase, alpha/beta domain LK428_RS11915 PF00224 Pyruvate kinase, barrel domain LK428_RS11920 PF02595 Glycerate kinase family LK428_RS11925 PF00398 Ribosomal RNA adenine dimethylase LK428_RS11930 PF09312 SurA N-terminal domain LK428_RS11930 PF00639 PPIC-type PPIASE domain LK428_RS11935 PF04453 LPS transport system D LK428_RS11940 PF01636 Phosphotransferase enzyme family LK428_RS11945 PF00483 Nucleotidyl transferase LK428_RS11955 PF01329 Pterin 4 alpha carbinolamine dehydratase LK428_RS11960 PF04972 BON domain LK428_RS11960 PF00691 OmpA family LK428_RS11975 PF00202 Aminotransferase class-III LK428_RS11980 PF01425 Amidase LK428_RS11985 PF00005 ABC transporter LK428_RS11985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS11990 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS11995 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS12000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS12020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LK428_RS12025 PF16653 Saccharopine dehydrogenase C-terminal domain LK428_RS12025 PF03435 Saccharopine dehydrogenase NADP binding domain LK428_RS12040 PF16220 Domain of unknown function (DUF4880) LK428_RS12040 PF04773 FecR protein LK428_RS12045 PF07715 TonB-dependent Receptor Plug Domain LK428_RS12045 PF00593 TonB dependent receptor LK428_RS12050 PF04264 YceI-like domain LK428_RS12070 PF01327 Polypeptide deformylase LK428_RS12075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK428_RS12085 PF01553 Acyltransferase LK428_RS12095 PF05746 DALR anticodon binding domain LK428_RS12095 PF02092 Glycyl-tRNA synthetase beta subunit LK428_RS12100 PF02091 Glycyl-tRNA synthetase alpha subunit LK428_RS12115 PF01960 ArgJ family LK428_RS12125 PF00293 NUDIX domain LK428_RS12140 PF02321 Outer membrane efflux protein LK428_RS12145 PF00873 AcrB/AcrD/AcrF family LK428_RS12150 PF00873 AcrB/AcrD/AcrF family LK428_RS12155 PF13533 Biotin-lipoyl like LK428_RS12160 PF07072 Cell division protein LK428_RS12165 PF01121 Dephospho-CoA kinase LK428_RS12170 PF01478 Type IV leader peptidase family LK428_RS12170 PF06750 Bacterial Peptidase A24 N-terminal domain LK428_RS12185 PF02569 Pantoate-beta-alanine ligase LK428_RS12190 PF02616 Segregation and condensation protein ScpA LK428_RS12200 PF07690 Major Facilitator Superfamily LK428_RS12205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LK428_RS12205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LK428_RS12215 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS12220 PF00005 ABC transporter LK428_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS12235 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS12240 PF00005 ABC transporter LK428_RS12245 PF18075 FtsX extracellular domain LK428_RS12250 PF03975 CheD chemotactic sensory transduction LK428_RS12260 PF14815 NUDIX domain LK428_RS12260 PF10576 Iron-sulfur binding domain of endonuclease III LK428_RS12260 PF00633 Helix-hairpin-helix motif LK428_RS12260 PF00730 HhH-GPD superfamily base excision DNA repair protein LK428_RS12270 PF08241 Methyltransferase domain LK428_RS12285 PF00486 Transcriptional regulatory protein, C terminal LK428_RS12285 PF00072 Response regulator receiver domain LK428_RS12290 PF00486 Transcriptional regulatory protein, C terminal LK428_RS12290 PF00072 Response regulator receiver domain LK428_RS12315 PF04997 RNA polymerase Rpb1, domain 1 LK428_RS12315 PF00623 RNA polymerase Rpb1, domain 2 LK428_RS12315 PF04983 RNA polymerase Rpb1, domain 3 LK428_RS12315 PF05000 RNA polymerase Rpb1, domain 4 LK428_RS12315 PF04998 RNA polymerase Rpb1, domain 5 LK428_RS12320 PF04560 RNA polymerase Rpb2, domain 7 LK428_RS12320 PF00562 RNA polymerase Rpb2, domain 6 LK428_RS12320 PF04565 RNA polymerase Rpb2, domain 3 LK428_RS12320 PF04561 RNA polymerase Rpb2, domain 2 LK428_RS12320 PF10385 RNA polymerase beta subunit external 1 domain LK428_RS12320 PF04563 RNA polymerase beta subunit LK428_RS12325 PF00542 Ribosomal protein L7/L12 C-terminal domain LK428_RS12325 PF16320 Ribosomal protein L7/L12 dimerisation domain LK428_RS12330 PF00466 Ribosomal protein L10 LK428_RS12335 PF00687 Ribosomal protein L1p/L10e family LK428_RS12340 PF03946 Ribosomal protein L11, N-terminal domain LK428_RS12340 PF00298 Ribosomal protein L11, RNA binding domain LK428_RS12345 PF00467 KOW motif LK428_RS12345 PF02357 Transcription termination factor nusG LK428_RS12350 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LK428_RS12360 PF00009 Elongation factor Tu GTP binding domain LK428_RS12360 PF03144 Elongation factor Tu domain 2 LK428_RS12360 PF03143 Elongation factor Tu C-terminal domain LK428_RS12385 PF17762 HTH domain found in ParB protein LK428_RS12385 PF02195 ParB-like nuclease domain LK428_RS12395 PF13614 AAA domain LK428_RS12400 PF02527 rRNA small subunit methyltransferase G LK428_RS12405 PF01134 Glucose inhibited division protein A LK428_RS12405 PF13932 GidA associated domain LK428_RS12410 PF00313 'Cold-shock' DNA-binding domain LK428_RS12415 PF00155 Aminotransferase class I and II LK428_RS12420 PF01970 Tripartite tricarboxylate transporter TctA family LK428_RS12435 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS12440 PF00072 Response regulator receiver domain LK428_RS12440 PF00486 Transcriptional regulatory protein, C terminal LK428_RS12450 PF01926 50S ribosome-binding GTPase LK428_RS12450 PF12631 MnmE helical domain LK428_RS12450 PF10396 GTP-binding protein TrmE N-terminus LK428_RS12455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS12460 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS12465 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS12465 PF12911 N-terminal TM domain of oligopeptide transport permease C LK428_RS12470 PF00005 ABC transporter LK428_RS12470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS12475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS12475 PF00005 ABC transporter LK428_RS12480 PF07687 Peptidase dimerisation domain LK428_RS12480 PF01546 Peptidase family M20/M25/M40 LK428_RS12485 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LK428_RS12495 PF00005 ABC transporter LK428_RS12500 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS12505 PF00199 Catalase LK428_RS12505 PF06628 Catalase-related immune-responsive LK428_RS12535 PF00581 Rhodanese-like domain LK428_RS12535 PF17773 UPF0176 acylphosphatase like domain LK428_RS12540 PF01588 Putative tRNA binding domain LK428_RS12540 PF09334 tRNA synthetases class I (M) LK428_RS12550 PF10609 NUBPL iron-transfer P-loop NTPase LK428_RS12565 PF00692 dUTPase LK428_RS12590 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LK428_RS12590 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LK428_RS12590 PF01276 Orn/Lys/Arg decarboxylase, major domain LK428_RS12630 PF07681 DoxX LK428_RS12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS12635 PF03466 LysR substrate binding domain LK428_RS12650 PF04377 Arginine-tRNA-protein transferase, C terminus LK428_RS12650 PF04376 Arginine-tRNA-protein transferase, N terminus LK428_RS12655 PF01180 Dihydroorotate dehydrogenase LK428_RS12665 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS12670 PF18807 Tripartite Tc toxins repeat LK428_RS12670 PF05785 Rho-activating domain of cytotoxic necrotizing factor LK428_RS12675 PF09339 IclR helix-turn-helix domain LK428_RS12675 PF01614 Bacterial transcriptional regulator LK428_RS12680 PF02464 Competence-damaged protein LK428_RS12680 PF18146 Damage-inducible protein CinA KH domain LK428_RS12680 PF00994 Probable molybdopterin binding domain LK428_RS12700 PF00270 DEAD/DEAH box helicase LK428_RS12700 PF00271 Helicase conserved C-terminal domain LK428_RS12715 PF01063 Amino-transferase class IV LK428_RS12730 PF00561 alpha/beta hydrolase fold LK428_RS12735 PF13181 Tetratricopeptide repeat LK428_RS12735 PF01435 Peptidase family M48 LK428_RS12740 PF00483 Nucleotidyl transferase LK428_RS12750 PF13609 Gram-negative porin LK428_RS12765 PF05195 Aminopeptidase P, N-terminal domain LK428_RS12765 PF00557 Metallopeptidase family M24 LK428_RS12775 PF01494 FAD binding domain LK428_RS12780 PF01207 Dihydrouridine synthase (Dus) LK428_RS12785 PF02954 Bacterial regulatory protein, Fis family LK428_RS12790 PF01808 AICARFT/IMPCHase bienzyme LK428_RS12790 PF02142 MGS-like domain LK428_RS12795 PF02075 Crossover junction endodeoxyribonuclease RuvC LK428_RS12800 PF07499 RuvA, C-terminal domain LK428_RS12800 PF01330 RuvA N terminal domain LK428_RS12805 PF01370 NAD dependent epimerase/dehydratase family LK428_RS12810 PF00291 Pyridoxal-phosphate dependent enzyme LK428_RS12815 PF17864 RuvB AAA lid domain LK428_RS12815 PF05496 Holliday junction DNA helicase RuvB P-loop domain LK428_RS12815 PF05491 RuvB C-terminal winged helix domain LK428_RS12820 PF00270 DEAD/DEAH box helicase LK428_RS12820 PF00271 Helicase conserved C-terminal domain LK428_RS12820 PF00570 HRDC domain LK428_RS12820 PF16124 RecQ zinc-binding LK428_RS12820 PF09382 RQC domain LK428_RS12840 PF00486 Transcriptional regulatory protein, C terminal LK428_RS12840 PF00072 Response regulator receiver domain LK428_RS12845 PF02702 Osmosensitive K+ channel His kinase sensor domain LK428_RS12845 PF13493 Domain of unknown function (DUF4118) LK428_RS12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS12855 PF01654 Cytochrome bd terminal oxidase subunit I LK428_RS12860 PF00749 tRNA synthetases class I (E and Q), catalytic domain LK428_RS12860 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LK428_RS12865 PF05209 Septum formation inhibitor MinC, N-terminal domain LK428_RS12865 PF03775 Septum formation inhibitor MinC, C-terminal domain LK428_RS12870 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LK428_RS12875 PF03776 Septum formation topological specificity factor MinE LK428_RS12895 PF00005 ABC transporter LK428_RS12895 PF12848 ABC transporter LK428_RS12915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS12920 PF00535 Glycosyl transferase family 2 LK428_RS12930 PF17755 UvrA DNA-binding domain LK428_RS12930 PF00005 ABC transporter LK428_RS12930 PF17760 UvrA interaction domain LK428_RS12935 PF00425 chorismate binding enzyme LK428_RS12935 PF04715 Anthranilate synthase component I, N terminal region LK428_RS12940 PF01063 Amino-transferase class IV LK428_RS12955 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS12960 PF00501 AMP-binding enzyme LK428_RS12960 PF13193 AMP-binding enzyme C-terminal domain LK428_RS12965 PF07702 UTRA domain LK428_RS12965 PF00392 Bacterial regulatory proteins, gntR family LK428_RS12970 PF00899 ThiF family LK428_RS12985 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LK428_RS12985 PF01243 Pyridoxamine 5'-phosphate oxidase LK428_RS12990 PF01613 Flavin reductase like domain LK428_RS13000 PF00551 Formyl transferase LK428_RS13005 PF03466 LysR substrate binding domain LK428_RS13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS13070 PF02586 SOS response associated peptidase (SRAP) LK428_RS13080 PF00486 Transcriptional regulatory protein, C terminal LK428_RS13080 PF00072 Response regulator receiver domain LK428_RS13085 PF00293 NUDIX domain LK428_RS13090 PF04073 Aminoacyl-tRNA editing domain LK428_RS13090 PF03129 Anticodon binding domain LK428_RS13090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK428_RS13095 PF03061 Thioesterase superfamily LK428_RS13100 PF01618 MotA/TolQ/ExbB proton channel family LK428_RS13105 PF02472 Biopolymer transport protein ExbD/TolR LK428_RS13115 PF07676 WD40-like Beta Propeller Repeat LK428_RS13115 PF04052 TolB amino-terminal domain LK428_RS13120 PF00691 OmpA family LK428_RS13130 PF01032 FecCD transport family LK428_RS13135 PF00005 ABC transporter LK428_RS13140 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS13145 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS13165 PF12911 N-terminal TM domain of oligopeptide transport permease C LK428_RS13165 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS13170 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS13175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS13180 PF10396 GTP-binding protein TrmE N-terminus LK428_RS13180 PF12631 MnmE helical domain LK428_RS13180 PF01926 50S ribosome-binding GTPase LK428_RS13200 PF00892 EamA-like transporter family LK428_RS13210 PF00437 Type II/IV secretion system protein LK428_RS13215 PF03743 Bacterial conjugation TrbI-like protein LK428_RS13220 PF03524 Conjugal transfer protein LK428_RS13225 PF04335 VirB8 protein LK428_RS13235 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LK428_RS13240 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LK428_RS13245 PF05101 Type IV secretory pathway, VirB3-like protein LK428_RS13250 PF04956 TrbC/VIRB2 family LK428_RS13255 PF03440 Aerolysin/Pertussis toxin (APT) domain LK428_RS13255 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain LK428_RS13260 PF09276 Pertussis toxin S5 subunit LK428_RS13265 PF09275 Pertussis toxin S4 subunit LK428_RS13270 PF03440 Aerolysin/Pertussis toxin (APT) domain LK428_RS13270 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain LK428_RS13275 PF02917 Pertussis toxin, subunit 1 LK428_RS13280 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS13300 PF00902 Sec-independent protein translocase protein (TatC) LK428_RS13305 PF02416 mttA/Hcf106 family LK428_RS13310 PF02416 mttA/Hcf106 family LK428_RS13315 PF01230 HIT domain LK428_RS13320 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LK428_RS13325 PF01502 Phosphoribosyl-AMP cyclohydrolase LK428_RS13330 PF00977 Histidine biosynthesis protein LK428_RS13335 PF00977 Histidine biosynthesis protein LK428_RS13340 PF00117 Glutamine amidotransferase class-I LK428_RS13345 PF00475 Imidazoleglycerol-phosphate dehydratase LK428_RS13350 PF00155 Aminotransferase class I and II LK428_RS13355 PF00815 Histidinol dehydrogenase LK428_RS13360 PF01634 ATP phosphoribosyltransferase LK428_RS13365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LK428_RS13375 PF01061 ABC-2 type transporter LK428_RS13380 PF00005 ABC transporter LK428_RS13390 PF04333 MlaA lipoprotein LK428_RS13395 PF02470 MlaD protein LK428_RS13400 PF02405 Permease MlaE LK428_RS13405 PF00005 ABC transporter LK428_RS13410 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS13415 PF03922 OmpW family LK428_RS13420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LK428_RS13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS13425 PF04898 Glutamate synthase central domain LK428_RS13425 PF00310 Glutamine amidotransferases class-II LK428_RS13425 PF01645 Conserved region in glutamate synthase LK428_RS13425 PF01493 GXGXG motif LK428_RS13435 PF08240 Alcohol dehydrogenase GroES-like domain LK428_RS13435 PF00107 Zinc-binding dehydrogenase LK428_RS13440 PF00756 Putative esterase LK428_RS13450 PF04545 Sigma-70, region 4 LK428_RS13450 PF04542 Sigma-70 region 2 LK428_RS13450 PF00140 Sigma-70 factor, region 1.2 LK428_RS13455 PF00149 Calcineurin-like phosphoesterase LK428_RS13460 PF00999 Sodium/hydrogen exchanger family LK428_RS13470 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LK428_RS13470 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LK428_RS13475 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK428_RS13490 PF00510 Cytochrome c oxidase subunit III LK428_RS13510 PF02628 Cytochrome oxidase assembly protein LK428_RS13515 PF01040 UbiA prenyltransferase family LK428_RS13520 PF02630 SCO1/SenC LK428_RS13540 PF12804 MobA-like NTP transferase domain LK428_RS13540 PF00132 Bacterial transferase hexapeptide (six repeats) LK428_RS13540 PF14602 Hexapeptide repeat of succinyl-transferase LK428_RS13545 PF07690 Major Facilitator Superfamily LK428_RS13555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LK428_RS13555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LK428_RS13555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LK428_RS13575 PF00155 Aminotransferase class I and II LK428_RS13580 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS13590 PF00682 HMGL-like LK428_RS13595 PF02481 DNA recombination-mediator protein A LK428_RS13595 PF17782 DprA winged helix domain LK428_RS13600 PF01037 Lrp/AsnC ligand binding domain LK428_RS13605 PF00266 Aminotransferase class-V LK428_RS13610 PF01327 Polypeptide deformylase LK428_RS13615 PF02911 Formyl transferase, C-terminal domain LK428_RS13615 PF00551 Formyl transferase LK428_RS13625 PF13419 Haloacid dehalogenase-like hydrolase LK428_RS13635 PF03641 Possible lysine decarboxylase LK428_RS13645 PF18693 TRAM domain LK428_RS13645 PF00919 Uncharacterized protein family UPF0004 LK428_RS13645 PF04055 Radical SAM superfamily LK428_RS13650 PF01361 Tautomerase enzyme LK428_RS13655 PF01266 FAD dependent oxidoreductase LK428_RS13660 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS13665 PF07729 FCD domain LK428_RS13665 PF00392 Bacterial regulatory proteins, gntR family LK428_RS13680 PF03447 Homoserine dehydrogenase, NAD binding domain LK428_RS13680 PF01958 Domain of unknown function DUF108 LK428_RS13690 PF01189 16S rRNA methyltransferase RsmB/F LK428_RS13690 PF01029 NusB family LK428_RS13700 PF00672 HAMP domain LK428_RS13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS13700 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS13700 PF00989 PAS fold LK428_RS13705 PF00158 Sigma-54 interaction domain LK428_RS13705 PF00072 Response regulator receiver domain LK428_RS13705 PF02954 Bacterial regulatory protein, Fis family LK428_RS13710 PF02254 TrkA-N domain LK428_RS13710 PF02080 TrkA-C domain LK428_RS13715 PF02386 Cation transport protein LK428_RS13720 PF01047 MarR family LK428_RS13730 PF12804 MobA-like NTP transferase domain LK428_RS13740 PF17645 Arylmalonate decarboxylase LK428_RS13755 PF00857 Isochorismatase family LK428_RS13765 PF00355 Rieske [2Fe-2S] domain LK428_RS13765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LK428_RS13770 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS13770 PF14759 Reductase C-terminal LK428_RS13775 PF00355 Rieske [2Fe-2S] domain LK428_RS13780 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS13785 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LK428_RS13785 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LK428_RS13790 PF03450 CO dehydrogenase flavoprotein C-terminal domain LK428_RS13790 PF00941 FAD binding domain in molybdopterin dehydrogenase LK428_RS13795 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS13795 PF01799 [2Fe-2S] binding domain LK428_RS13805 PF00005 ABC transporter LK428_RS13810 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS13820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS13825 PF04107 Glutamate-cysteine ligase family 2(GCS2) LK428_RS13830 PF08241 Methyltransferase domain LK428_RS13840 PF00588 SpoU rRNA Methylase family LK428_RS13845 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS13850 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LK428_RS13850 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LK428_RS13855 PF02556 Preprotein translocase subunit SecB LK428_RS13860 PF00462 Glutaredoxin LK428_RS13865 PF00581 Rhodanese-like domain LK428_RS13865 PF12368 Rhodanase C-terminal LK428_RS13865 PF17773 UPF0176 acylphosphatase like domain LK428_RS13870 PF00300 Histidine phosphatase superfamily (branch 1) LK428_RS13875 PF01551 Peptidase family M23 LK428_RS13880 PF13180 PDZ domain LK428_RS13880 PF03572 Peptidase family S41 LK428_RS13885 PF00899 ThiF family LK428_RS13915 PF04386 Stringent starvation protein B LK428_RS13920 PF02798 Glutathione S-transferase, N-terminal domain LK428_RS13920 PF00043 Glutathione S-transferase, C-terminal domain LK428_RS13925 PF02167 Cytochrome C1 family LK428_RS13930 PF00032 Cytochrome b(C-terminal)/b6/petD LK428_RS13930 PF00033 Cytochrome b/b6/petB LK428_RS13935 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LK428_RS13935 PF00355 Rieske [2Fe-2S] domain LK428_RS13940 PF01741 Large-conductance mechanosensitive channel, MscL LK428_RS13945 PF01784 NIF3 (NGG1p interacting factor 3) LK428_RS13950 PF13180 PDZ domain LK428_RS13960 PF02667 Short chain fatty acid transporter LK428_RS13965 PF00171 Aldehyde dehydrogenase family LK428_RS13970 PF07729 FCD domain LK428_RS13970 PF00392 Bacterial regulatory proteins, gntR family LK428_RS13980 PF00313 'Cold-shock' DNA-binding domain LK428_RS13985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS13985 PF03466 LysR substrate binding domain LK428_RS14005 PF00108 Thiolase, N-terminal domain LK428_RS14005 PF02803 Thiolase, C-terminal domain LK428_RS14015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS14015 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS14015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS14020 PF03466 LysR substrate binding domain LK428_RS14025 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14030 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS14035 PF02515 CoA-transferase family III LK428_RS14040 PF03741 Integral membrane protein TerC family LK428_RS14040 PF03471 Transporter associated domain LK428_RS14045 PF02308 MgtC family LK428_RS14055 PF00155 Aminotransferase class I and II LK428_RS14055 PF00392 Bacterial regulatory proteins, gntR family LK428_RS14065 PF00582 Universal stress protein family LK428_RS14085 PF00929 Exonuclease LK428_RS14100 PF02667 Short chain fatty acid transporter LK428_RS14110 PF03616 Sodium/glutamate symporter LK428_RS14120 PF00535 Glycosyl transferase family 2 LK428_RS14135 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS14145 PF02515 CoA-transferase family III LK428_RS14150 PF00392 Bacterial regulatory proteins, gntR family LK428_RS14150 PF07729 FCD domain LK428_RS14155 PF02347 Glycine cleavage system P-protein LK428_RS14160 PF01597 Glycine cleavage H-protein LK428_RS14165 PF08669 Glycine cleavage T-protein C-terminal barrel domain LK428_RS14165 PF01571 Aminomethyltransferase folate-binding domain LK428_RS14170 PF02535 ZIP Zinc transporter LK428_RS14175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LK428_RS14175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LK428_RS14190 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS14200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LK428_RS14205 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS14205 PF00175 Oxidoreductase NAD-binding domain LK428_RS14205 PF00970 Oxidoreductase FAD-binding domain LK428_RS14220 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14255 PF13091 PLD-like domain LK428_RS14260 PF00005 ABC transporter LK428_RS14260 PF03459 TOBE domain LK428_RS14265 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS14275 PF00561 alpha/beta hydrolase fold LK428_RS14320 PF00210 Ferritin-like domain LK428_RS14330 PF16658 Class II release factor RF3, C-terminal domain LK428_RS14330 PF03144 Elongation factor Tu domain 2 LK428_RS14330 PF00009 Elongation factor Tu GTP binding domain LK428_RS14335 PF01810 LysE type translocator LK428_RS14340 PF00270 DEAD/DEAH box helicase LK428_RS14340 PF00271 Helicase conserved C-terminal domain LK428_RS14350 PF04536 TPM domain LK428_RS14355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS14355 PF00005 ABC transporter LK428_RS14385 PF00183 Hsp90 protein LK428_RS14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS14390 PF00043 Glutathione S-transferase, C-terminal domain LK428_RS14390 PF13417 Glutathione S-transferase, N-terminal domain LK428_RS14400 PF01510 N-acetylmuramoyl-L-alanine amidase LK428_RS14410 PF01578 Cytochrome C assembly protein LK428_RS14415 PF02978 Signal peptide binding domain LK428_RS14415 PF02881 SRP54-type protein, helical bundle domain LK428_RS14415 PF00448 SRP54-type protein, GTPase domain LK428_RS14420 PF04972 BON domain LK428_RS14420 PF01476 LysM domain LK428_RS14425 PF05690 Thiazole biosynthesis protein ThiG LK428_RS14425 PF02597 ThiS family LK428_RS14430 PF00561 alpha/beta hydrolase fold LK428_RS14435 PF02390 Putative methyltransferase LK428_RS14450 PF00682 HMGL-like LK428_RS14455 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14485 PF00355 Rieske [2Fe-2S] domain LK428_RS14485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LK428_RS14505 PF02423 Ornithine cyclodeaminase/mu-crystallin family LK428_RS14530 PF04542 Sigma-70 region 2 LK428_RS14530 PF08281 Sigma-70, region 4 LK428_RS14535 PF16220 Domain of unknown function (DUF4880) LK428_RS14535 PF04773 FecR protein LK428_RS14540 PF07715 TonB-dependent Receptor Plug Domain LK428_RS14540 PF04886 PT repeat LK428_RS14540 PF00593 TonB dependent receptor LK428_RS14545 PF05171 Haemin-degrading HemS.ChuX domain LK428_RS14550 PF01497 Periplasmic binding protein LK428_RS14555 PF01032 FecCD transport family LK428_RS14560 PF00005 ABC transporter LK428_RS14565 PF04463 Protein of unknown function (DUF523) LK428_RS14570 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA LK428_RS14575 PF13532 2OG-Fe(II) oxygenase superfamily LK428_RS14580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LK428_RS14580 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LK428_RS14595 PF11737 Protein of unknown function (DUF3300) LK428_RS14610 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14615 PF12706 Beta-lactamase superfamily domain LK428_RS14630 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14635 PF00501 AMP-binding enzyme LK428_RS14635 PF13193 AMP-binding enzyme C-terminal domain LK428_RS14660 PF00266 Aminotransferase class-V LK428_RS14665 PF07729 FCD domain LK428_RS14665 PF00392 Bacterial regulatory proteins, gntR family LK428_RS14675 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK428_RS14680 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14685 PF03466 LysR substrate binding domain LK428_RS14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS14720 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14725 PF03466 LysR substrate binding domain LK428_RS14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS14730 PF01565 FAD binding domain LK428_RS14730 PF09330 D-lactate dehydrogenase, membrane binding LK428_RS14735 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS14735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS14735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS14740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS14740 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS14740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS14745 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14750 PF07687 Peptidase dimerisation domain LK428_RS14750 PF01546 Peptidase family M20/M25/M40 LK428_RS14760 PF01042 Endoribonuclease L-PSP LK428_RS14770 PF08240 Alcohol dehydrogenase GroES-like domain LK428_RS14770 PF00107 Zinc-binding dehydrogenase LK428_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS14775 PF03466 LysR substrate binding domain LK428_RS14780 PF13607 Succinyl-CoA ligase like flavodoxin domain LK428_RS14780 PF13380 CoA binding domain LK428_RS14785 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS14795 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14800 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LK428_RS14805 PF01380 SIS domain LK428_RS14810 PF01037 Lrp/AsnC ligand binding domain LK428_RS14815 PF02803 Thiolase, C-terminal domain LK428_RS14815 PF00108 Thiolase, N-terminal domain LK428_RS14820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK428_RS14820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK428_RS14820 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS14825 PF12806 Acetyl-CoA dehydrogenase C-terminal like LK428_RS14825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS14825 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS14825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS14830 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS14835 PF00583 Acetyltransferase (GNAT) family LK428_RS14835 PF13380 CoA binding domain LK428_RS14835 PF13607 Succinyl-CoA ligase like flavodoxin domain LK428_RS14850 PF00384 Molybdopterin oxidoreductase LK428_RS14850 PF01568 Molydopterin dinucleotide binding domain LK428_RS14865 PF09278 MerR, DNA binding LK428_RS14865 PF00376 MerR family regulatory protein LK428_RS14885 PF05036 Sporulation related domain LK428_RS14885 PF03330 Lytic transglycolase LK428_RS14890 PF03668 P-loop ATPase protein family LK428_RS14900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK428_RS14900 PF00034 Cytochrome c LK428_RS14900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LK428_RS14905 PF07475 HPr Serine kinase C-terminal domain LK428_RS14905 PF02603 HPr Serine kinase N terminus LK428_RS14910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK428_RS14915 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LK428_RS14925 PF01266 FAD dependent oxidoreductase LK428_RS14930 PF02538 Hydantoinase B/oxoprolinase LK428_RS14935 PF01968 Hydantoinase/oxoprolinase LK428_RS14935 PF05378 Hydantoinase/oxoprolinase N-terminal region LK428_RS14940 PF03466 LysR substrate binding domain LK428_RS14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS14950 PF00348 Polyprenyl synthetase LK428_RS14960 PF00829 Ribosomal prokaryotic L21 protein LK428_RS14965 PF01016 Ribosomal L27 protein LK428_RS14970 PF01018 GTP1/OBG LK428_RS14970 PF01926 50S ribosome-binding GTPase LK428_RS14975 PF00696 Amino acid kinase family LK428_RS14975 PF01472 PUA domain LK428_RS15000 PF01053 Cys/Met metabolism PLP-dependent enzyme LK428_RS15005 PF01323 DSBA-like thioredoxin domain LK428_RS15005 PF00085 Thioredoxin LK428_RS15015 PF05746 DALR anticodon binding domain LK428_RS15015 PF00750 tRNA synthetases class I (R) LK428_RS15015 PF03485 Arginyl tRNA synthetase N terminal domain LK428_RS15035 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS15040 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS15045 PF13416 Bacterial extracellular solute-binding protein LK428_RS15050 PF00005 ABC transporter LK428_RS15050 PF17912 MalK OB fold domain LK428_RS15055 PF00149 Calcineurin-like phosphoesterase LK428_RS15065 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS15070 PF09339 IclR helix-turn-helix domain LK428_RS15090 PF02515 CoA-transferase family III LK428_RS15095 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS15100 PF02515 CoA-transferase family III LK428_RS15145 PF00561 alpha/beta hydrolase fold LK428_RS15150 PF00561 alpha/beta hydrolase fold LK428_RS15150 PF07021 Methionine biosynthesis protein MetW LK428_RS15160 PF07690 Major Facilitator Superfamily LK428_RS15165 PF13609 Gram-negative porin LK428_RS15170 PF01177 Asp/Glu/Hydantoin racemase LK428_RS15175 PF00005 ABC transporter LK428_RS15180 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS15185 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS15190 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK428_RS15200 PF02219 Methylenetetrahydrofolate reductase LK428_RS15205 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LK428_RS15210 PF05221 S-adenosyl-L-homocysteine hydrolase LK428_RS15210 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LK428_RS15215 PF13439 Glycosyltransferase Family 4 LK428_RS15215 PF00534 Glycosyl transferases group 1 LK428_RS15225 PF02772 S-adenosylmethionine synthetase, central domain LK428_RS15225 PF00438 S-adenosylmethionine synthetase, N-terminal domain LK428_RS15225 PF02773 S-adenosylmethionine synthetase, C-terminal domain LK428_RS15235 PF03279 Bacterial lipid A biosynthesis acyltransferase LK428_RS15240 PF01678 Diaminopimelate epimerase LK428_RS15250 PF02899 Phage integrase, N-terminal SAM-like domain LK428_RS15250 PF00589 Phage integrase family LK428_RS15255 PF00593 TonB dependent receptor LK428_RS15255 PF07715 TonB-dependent Receptor Plug Domain LK428_RS15260 PF03824 High-affinity nickel-transport protein LK428_RS15270 PF01297 Zinc-uptake complex component A periplasmic LK428_RS15275 PF00950 ABC 3 transport family LK428_RS15280 PF00005 ABC transporter LK428_RS15290 PF01475 Ferric uptake regulator family LK428_RS15295 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK428_RS15295 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK428_RS15300 PF01258 Prokaryotic dksA/traR C4-type zinc finger LK428_RS15305 PF00227 Proteasome subunit LK428_RS15315 PF10431 C-terminal, D2-small domain, of ClpB protein LK428_RS15315 PF07724 AAA domain (Cdc48 subfamily) LK428_RS15315 PF00004 ATPase family associated with various cellular activities (AAA) LK428_RS15325 PF01923 Cobalamin adenosyltransferase LK428_RS15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS15335 PF03466 LysR substrate binding domain LK428_RS15340 PF00850 Histone deacetylase domain LK428_RS15345 PF07690 Major Facilitator Superfamily LK428_RS15345 PF00083 Sugar (and other) transporter LK428_RS15355 PF01464 Transglycosylase SLT domain LK428_RS15355 PF14718 Soluble lytic murein transglycosylase L domain LK428_RS15360 PF01743 Poly A polymerase head domain LK428_RS15360 PF12627 Probable RNA and SrmB- binding site of polymerase A LK428_RS15370 PF00270 DEAD/DEAH box helicase LK428_RS15370 PF00271 Helicase conserved C-terminal domain LK428_RS15375 PF03167 Uracil DNA glycosylase superfamily LK428_RS15385 PF02525 Flavodoxin-like fold LK428_RS15390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LK428_RS15390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK428_RS15400 PF01970 Tripartite tricarboxylate transporter TctA family LK428_RS15445 PF01790 Prolipoprotein diacylglyceryl transferase LK428_RS15450 PF00920 Dehydratase family LK428_RS15455 PF00034 Cytochrome c LK428_RS15460 PF01625 Peptide methionine sulfoxide reductase LK428_RS15465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK428_RS15470 PF01037 Lrp/AsnC ligand binding domain LK428_RS15510 PF07687 Peptidase dimerisation domain LK428_RS15510 PF01546 Peptidase family M20/M25/M40 LK428_RS15515 PF01979 Amidohydrolase family LK428_RS15520 PF12848 ABC transporter LK428_RS15520 PF00005 ABC transporter LK428_RS15520 PF16326 ABC transporter C-terminal domain LK428_RS15530 PF02381 MraZ protein, putative antitoxin-like LK428_RS15535 PF01795 MraW methylase family LK428_RS15540 PF04999 Cell division protein FtsL LK428_RS15545 PF03717 Penicillin-binding Protein dimerisation domain LK428_RS15545 PF00905 Penicillin binding protein transpeptidase domain LK428_RS15550 PF02875 Mur ligase family, glutamate ligase domain LK428_RS15550 PF08245 Mur ligase middle domain LK428_RS15555 PF00953 Glycosyl transferase family 4 LK428_RS15560 PF02875 Mur ligase family, glutamate ligase domain LK428_RS15560 PF08245 Mur ligase middle domain LK428_RS15565 PF01098 Cell cycle protein LK428_RS15570 PF03033 Glycosyltransferase family 28 N-terminal domain LK428_RS15570 PF04101 Glycosyltransferase family 28 C-terminal domain LK428_RS15575 PF08245 Mur ligase middle domain LK428_RS15575 PF01225 Mur ligase family, catalytic domain LK428_RS15575 PF02875 Mur ligase family, glutamate ligase domain LK428_RS15580 PF07478 D-ala D-ala ligase C-terminus LK428_RS15580 PF01820 D-ala D-ala ligase N-terminus LK428_RS15585 PF03799 Cell division protein FtsQ LK428_RS15585 PF08478 POTRA domain, FtsQ-type LK428_RS15590 PF02491 SHS2 domain inserted in FTSA LK428_RS15595 PF00091 Tubulin/FtsZ family, GTPase domain LK428_RS15595 PF12327 FtsZ family, C-terminal domain LK428_RS15600 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LK428_RS15610 PF01551 Peptidase family M23 LK428_RS15610 PF08525 Opacity-associated protein A N-terminal motif LK428_RS15610 PF01476 LysM domain LK428_RS15615 PF02810 SEC-C motif LK428_RS15615 PF07517 SecA DEAD-like domain LK428_RS15615 PF01043 SecA preprotein cross-linking domain LK428_RS15615 PF07516 SecA Wing and Scaffold domain LK428_RS15625 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS15640 PF01266 FAD dependent oxidoreductase LK428_RS15645 PF01037 Lrp/AsnC ligand binding domain LK428_RS15655 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LK428_RS15665 PF00392 Bacterial regulatory proteins, gntR family LK428_RS15665 PF07729 FCD domain LK428_RS15675 PF01425 Amidase LK428_RS15680 PF02515 CoA-transferase family III LK428_RS15685 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS15700 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS15705 PF00005 ABC transporter LK428_RS15720 PF01614 Bacterial transcriptional regulator LK428_RS15720 PF09339 IclR helix-turn-helix domain LK428_RS15725 PF13458 Periplasmic binding protein LK428_RS15735 PF00501 AMP-binding enzyme LK428_RS15735 PF13193 AMP-binding enzyme C-terminal domain LK428_RS15740 PF01042 Endoribonuclease L-PSP LK428_RS15745 PF02653 Branched-chain amino acid transport system / permease component LK428_RS15760 PF00005 ABC transporter LK428_RS15765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK428_RS15775 PF03466 LysR substrate binding domain LK428_RS15775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS15785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK428_RS15790 PF07690 Major Facilitator Superfamily LK428_RS15795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS15795 PF03466 LysR substrate binding domain LK428_RS15800 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS15805 PF01425 Amidase LK428_RS15810 PF00677 Lumazine binding domain LK428_RS15815 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS15820 PF13404 AsnC-type helix-turn-helix domain LK428_RS15820 PF01037 Lrp/AsnC ligand binding domain LK428_RS15830 PF13193 AMP-binding enzyme C-terminal domain LK428_RS15830 PF00501 AMP-binding enzyme LK428_RS15840 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS15850 PF03466 LysR substrate binding domain LK428_RS15860 PF00083 Sugar (and other) transporter LK428_RS15880 PF13609 Gram-negative porin LK428_RS15885 PF02548 Ketopantoate hydroxymethyltransferase LK428_RS15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS15890 PF03466 LysR substrate binding domain LK428_RS15900 PF00155 Aminotransferase class I and II LK428_RS15905 PF01966 HD domain LK428_RS15910 PF00403 Heavy-metal-associated domain LK428_RS15935 PF08240 Alcohol dehydrogenase GroES-like domain LK428_RS15935 PF00107 Zinc-binding dehydrogenase LK428_RS15945 PF08029 HisG, C-terminal domain LK428_RS15945 PF01634 ATP phosphoribosyltransferase LK428_RS15950 PF00005 ABC transporter LK428_RS16010 PF00440 Bacterial regulatory proteins, tetR family LK428_RS16015 PF05170 AsmA family LK428_RS16020 PF03352 Methyladenine glycosylase LK428_RS16025 PF00376 MerR family regulatory protein LK428_RS16025 PF09278 MerR, DNA binding LK428_RS16040 PF01547 Bacterial extracellular solute-binding protein LK428_RS16045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK428_RS16045 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS16050 PF08402 TOBE domain LK428_RS16050 PF00005 ABC transporter LK428_RS16055 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS16060 PF14785 Maltose transport system permease protein MalF P2 domain LK428_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS16085 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS16090 PF07729 FCD domain LK428_RS16090 PF00392 Bacterial regulatory proteins, gntR family LK428_RS16110 PF00465 Iron-containing alcohol dehydrogenase LK428_RS16120 PF03180 NLPA lipoprotein LK428_RS16125 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS16130 PF09383 NIL domain LK428_RS16130 PF00005 ABC transporter LK428_RS16135 PF01055 Glycosyl hydrolases family 31 LK428_RS16135 PF13802 Galactose mutarotase-like LK428_RS16145 PF00459 Inositol monophosphatase family LK428_RS16160 PF13193 AMP-binding enzyme C-terminal domain LK428_RS16160 PF00501 AMP-binding enzyme LK428_RS16165 PF01546 Peptidase family M20/M25/M40 LK428_RS16165 PF07687 Peptidase dimerisation domain LK428_RS16170 PF03466 LysR substrate binding domain LK428_RS16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS16175 PF03601 Conserved hypothetical protein 698 LK428_RS16180 PF03061 Thioesterase superfamily LK428_RS16185 PF03448 MgtE intracellular N domain LK428_RS16185 PF01769 Divalent cation transporter LK428_RS16185 PF00571 CBS domain LK428_RS16200 PF01488 Shikimate / quinate 5-dehydrogenase LK428_RS16200 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LK428_RS16200 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LK428_RS16205 PF00472 RF-1 domain LK428_RS16205 PF03462 PCRF domain LK428_RS16210 PF05175 Methyltransferase small domain LK428_RS16210 PF17827 PrmC N-terminal domain LK428_RS16215 PF00462 Glutaredoxin LK428_RS16220 PF02441 Flavoprotein LK428_RS16225 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS16230 PF09084 NMT1/THI5 like LK428_RS16235 PF03450 CO dehydrogenase flavoprotein C-terminal domain LK428_RS16235 PF00941 FAD binding domain in molybdopterin dehydrogenase LK428_RS16250 PF01799 [2Fe-2S] binding domain LK428_RS16250 PF00111 2Fe-2S iron-sulfur cluster binding domain LK428_RS16255 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LK428_RS16255 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LK428_RS16270 PF00164 Ribosomal protein S12/S23 LK428_RS16275 PF00177 Ribosomal protein S7p/S5e LK428_RS16280 PF03764 Elongation factor G, domain IV LK428_RS16280 PF14492 Elongation Factor G, domain II LK428_RS16280 PF03144 Elongation factor Tu domain 2 LK428_RS16280 PF00009 Elongation factor Tu GTP binding domain LK428_RS16280 PF00679 Elongation factor G C-terminus LK428_RS16285 PF03143 Elongation factor Tu C-terminal domain LK428_RS16285 PF03144 Elongation factor Tu domain 2 LK428_RS16285 PF00009 Elongation factor Tu GTP binding domain LK428_RS16290 PF00338 Ribosomal protein S10p/S20e LK428_RS16295 PF00297 Ribosomal protein L3 LK428_RS16300 PF00573 Ribosomal protein L4/L1 family LK428_RS16305 PF00276 Ribosomal protein L23 LK428_RS16310 PF00181 Ribosomal Proteins L2, RNA binding domain LK428_RS16310 PF03947 Ribosomal Proteins L2, C-terminal domain LK428_RS16315 PF00203 Ribosomal protein S19 LK428_RS16320 PF00237 Ribosomal protein L22p/L17e LK428_RS16325 PF07650 KH domain LK428_RS16325 PF00189 Ribosomal protein S3, C-terminal domain LK428_RS16330 PF00252 Ribosomal protein L16p/L10e LK428_RS16335 PF00831 Ribosomal L29 protein LK428_RS16340 PF00366 Ribosomal protein S17 LK428_RS16350 PF00171 Aldehyde dehydrogenase family LK428_RS16360 PF00238 Ribosomal protein L14p/L23e LK428_RS16365 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LK428_RS16370 PF00281 Ribosomal protein L5 LK428_RS16370 PF00673 ribosomal L5P family C-terminus LK428_RS16375 PF00253 Ribosomal protein S14p/S29e LK428_RS16380 PF00410 Ribosomal protein S8 LK428_RS16385 PF00347 Ribosomal protein L6 LK428_RS16390 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LK428_RS16395 PF00333 Ribosomal protein S5, N-terminal domain LK428_RS16395 PF03719 Ribosomal protein S5, C-terminal domain LK428_RS16400 PF00327 Ribosomal protein L30p/L7e LK428_RS16405 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LK428_RS16410 PF00344 SecY translocase LK428_RS16415 PF01176 Translation initiation factor 1A / IF-1 LK428_RS16420 PF00444 Ribosomal protein L36 LK428_RS16425 PF00416 Ribosomal protein S13/S18 LK428_RS16430 PF00411 Ribosomal protein S11 LK428_RS16435 PF01479 S4 domain LK428_RS16435 PF00163 Ribosomal protein S4/S9 N-terminal domain LK428_RS16440 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LK428_RS16440 PF01000 RNA polymerase Rpb3/RpoA insert domain LK428_RS16440 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LK428_RS16445 PF01196 Ribosomal protein L17 LK428_RS16450 PF01230 HIT domain LK428_RS16455 PF03091 CutA1 divalent ion tolerance protein LK428_RS16460 PF11412 Disulphide bond corrector protein DsbC LK428_RS16460 PF02683 Cytochrome C biogenesis protein transmembrane region LK428_RS16465 PF00892 EamA-like transporter family LK428_RS16470 PF00490 Delta-aminolevulinic acid dehydratase LK428_RS16475 PF01926 50S ribosome-binding GTPase LK428_RS16480 PF00034 Cytochrome c LK428_RS16485 PF05140 ResB-like family LK428_RS16490 PF01578 Cytochrome C assembly protein LK428_RS16495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LK428_RS16495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LK428_RS16500 PF13627 Prokaryotic lipoprotein-attachment site LK428_RS16505 PF01491 Frataxin-like domain LK428_RS16510 PF17092 Penicillin-binding protein OB-like domain LK428_RS16510 PF00912 Transglycosylase LK428_RS16510 PF00905 Penicillin binding protein transpeptidase domain LK428_RS16515 PF01202 Shikimate kinase LK428_RS16520 PF01761 3-dehydroquinate synthase LK428_RS16525 PF13286 Phosphohydrolase-associated domain LK428_RS16525 PF01966 HD domain LK428_RS16530 PF13417 Glutathione S-transferase, N-terminal domain LK428_RS16530 PF00043 Glutathione S-transferase, C-terminal domain LK428_RS16540 PF17760 UvrA interaction domain LK428_RS16540 PF17755 UvrA DNA-binding domain LK428_RS16545 PF07690 Major Facilitator Superfamily LK428_RS16550 PF00436 Single-strand binding protein family LK428_RS16555 PF00593 TonB dependent receptor LK428_RS16555 PF07715 TonB-dependent Receptor Plug Domain LK428_RS16575 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS16595 PF03466 LysR substrate binding domain LK428_RS16600 PF01979 Amidohydrolase family LK428_RS16605 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS16620 PF03466 LysR substrate binding domain LK428_RS16630 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS16635 PF00005 ABC transporter LK428_RS16650 PF01274 Malate synthase LK428_RS16670 PF01040 UbiA prenyltransferase family LK428_RS16675 PF00155 Aminotransferase class I and II LK428_RS16680 PF13185 GAF domain LK428_RS16685 PF00701 Dihydrodipicolinate synthetase family LK428_RS16700 PF01042 Endoribonuclease L-PSP LK428_RS16710 PF01145 SPFH domain / Band 7 family LK428_RS16715 PF07411 Domain of unknown function (DUF1508) LK428_RS16720 PF01168 Alanine racemase, N-terminal domain LK428_RS16720 PF14031 Putative serine dehydratase domain LK428_RS16745 PF12951 Passenger-associated-transport-repeat LK428_RS16745 PF12951 Passenger-associated-transport-repeat LK428_RS16755 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS16760 PF00501 AMP-binding enzyme LK428_RS16760 PF13193 AMP-binding enzyme C-terminal domain LK428_RS16765 PF01614 Bacterial transcriptional regulator LK428_RS16765 PF09339 IclR helix-turn-helix domain LK428_RS16770 PF00378 Enoyl-CoA hydratase/isomerase LK428_RS16775 PF02627 Carboxymuconolactone decarboxylase family LK428_RS16780 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS16795 PF08240 Alcohol dehydrogenase GroES-like domain LK428_RS16795 PF00107 Zinc-binding dehydrogenase LK428_RS16810 PF02515 CoA-transferase family III LK428_RS16815 PF14535 AMP-binding enzyme C-terminal domain LK428_RS16815 PF00501 AMP-binding enzyme LK428_RS16820 PF08361 MAATS-type transcriptional repressor, C-terminal region LK428_RS16820 PF00440 Bacterial regulatory proteins, tetR family LK428_RS16825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK428_RS16825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK428_RS16825 PF02770 Acyl-CoA dehydrogenase, middle domain LK428_RS16835 PF02653 Branched-chain amino acid transport system / permease component LK428_RS16840 PF00005 ABC transporter LK428_RS16845 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS16845 PF00005 ABC transporter LK428_RS16855 PF00106 short chain dehydrogenase LK428_RS16875 PF01575 MaoC like domain LK428_RS16905 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS16910 PF03466 LysR substrate binding domain LK428_RS16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS16915 PF02515 CoA-transferase family III LK428_RS16950 PF00072 Response regulator receiver domain LK428_RS16955 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LK428_RS16955 PF06481 COX Aromatic Rich Motif LK428_RS16960 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK428_RS16965 PF00510 Cytochrome c oxidase subunit III LK428_RS16970 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LK428_RS16975 PF01022 Bacterial regulatory protein, arsR family LK428_RS16980 PF07690 Major Facilitator Superfamily LK428_RS16995 PF05114 Protein of unknown function (DUF692) LK428_RS17010 PF00593 TonB dependent receptor LK428_RS17010 PF07715 TonB-dependent Receptor Plug Domain LK428_RS17025 PF01476 LysM domain LK428_RS17025 PF01551 Peptidase family M23 LK428_RS17040 PF04461 Protein of unknown function (DUF520) LK428_RS17050 PF08281 Sigma-70, region 4 LK428_RS17050 PF04542 Sigma-70 region 2 LK428_RS17070 PF00795 Carbon-nitrogen hydrolase LK428_RS17075 PF01523 Putative modulator of DNA gyrase LK428_RS17080 PF00793 DAHP synthetase I family LK428_RS17095 PF05594 Haemagluttinin repeat LK428_RS17095 PF05860 haemagglutination activity domain LK428_RS17095 PF13332 Hemagglutinin repeat LK428_RS17095 PF13018 Extended Signal Peptide of Type V secretion system LK428_RS17095 PF05860 haemagglutination activity domain LK428_RS17095 PF13332 Hemagglutinin repeat LK428_RS17095 PF13018 Extended Signal Peptide of Type V secretion system LK428_RS17095 PF05594 Haemagluttinin repeat LK428_RS17100 PF02913 FAD linked oxidases, C-terminal domain LK428_RS17100 PF01565 FAD binding domain LK428_RS17105 PF01565 FAD binding domain LK428_RS17105 PF02913 FAD linked oxidases, C-terminal domain LK428_RS17110 PF01565 FAD binding domain LK428_RS17115 PF13183 4Fe-4S dicluster domain LK428_RS17115 PF02754 Cysteine-rich domain LK428_RS17120 PF00756 Putative esterase LK428_RS17125 PF00593 TonB dependent receptor LK428_RS17125 PF07715 TonB-dependent Receptor Plug Domain LK428_RS17135 PF02233 NAD(P) transhydrogenase beta subunit LK428_RS17145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LK428_RS17145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LK428_RS17155 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS17160 PF03466 LysR substrate binding domain LK428_RS17160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS17170 PF01925 Sulfite exporter TauE/SafE LK428_RS17175 PF13417 Glutathione S-transferase, N-terminal domain LK428_RS17175 PF00043 Glutathione S-transferase, C-terminal domain LK428_RS17180 PF08328 Adenylosuccinate lyase C-terminal LK428_RS17180 PF00206 Lyase LK428_RS17185 PF01322 Cytochrome C' LK428_RS17205 PF01594 AI-2E family transporter LK428_RS17220 PF00392 Bacterial regulatory proteins, gntR family LK428_RS17220 PF07729 FCD domain LK428_RS17230 PF03880 DbpA RNA binding domain LK428_RS17230 PF00270 DEAD/DEAH box helicase LK428_RS17230 PF00271 Helicase conserved C-terminal domain LK428_RS17235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK428_RS17240 PF00857 Isochorismatase family LK428_RS17245 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS17250 PF00005 ABC transporter LK428_RS17260 PF02230 Phospholipase/Carboxylesterase LK428_RS17265 PF04751 Protein of unknown function (DUF615) LK428_RS17270 PF01523 Putative modulator of DNA gyrase LK428_RS17280 PF00572 Ribosomal protein L13 LK428_RS17285 PF00380 Ribosomal protein S9/S16 LK428_RS17290 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK428_RS17290 PF02774 Semialdehyde dehydrogenase, dimerisation domain LK428_RS17300 PF01521 Iron-sulphur cluster biosynthesis LK428_RS17305 PF03702 Anhydro-N-acetylmuramic acid kinase LK428_RS17310 PF01551 Peptidase family M23 LK428_RS17310 PF08460 Bacterial SH3 domain LK428_RS17315 PF01479 S4 domain LK428_RS17315 PF00579 tRNA synthetases class I (W and Y) LK428_RS17325 PF00464 Serine hydroxymethyltransferase LK428_RS17330 PF03477 ATP cone domain LK428_RS17345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK428_RS17345 PF01872 RibD C-terminal domain LK428_RS17355 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LK428_RS17355 PF01488 Shikimate / quinate 5-dehydrogenase LK428_RS17355 PF08501 Shikimate dehydrogenase substrate binding domain LK428_RS17365 PF00773 RNB domain LK428_RS17370 PF05728 Uncharacterised protein family (UPF0227) LK428_RS17375 PF08245 Mur ligase middle domain LK428_RS17375 PF01225 Mur ligase family, catalytic domain LK428_RS17375 PF02875 Mur ligase family, glutamate ligase domain LK428_RS17380 PF08534 Redoxin LK428_RS17385 PF01220 Dehydroquinase class II LK428_RS17390 PF00364 Biotin-requiring enzyme LK428_RS17395 PF02785 Biotin carboxylase C-terminal domain LK428_RS17395 PF00289 Biotin carboxylase, N-terminal domain LK428_RS17395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK428_RS17410 PF00294 pfkB family carbohydrate kinase LK428_RS17430 PF03062 MBOAT, membrane-bound O-acyltransferase family LK428_RS17435 PF00501 AMP-binding enzyme LK428_RS17435 PF13193 AMP-binding enzyme C-terminal domain LK428_RS17450 PF00268 Ribonucleotide reductase, small chain LK428_RS17455 PF02867 Ribonucleotide reductase, barrel domain LK428_RS17455 PF03477 ATP cone domain LK428_RS17455 PF00317 Ribonucleotide reductase, all-alpha domain LK428_RS17465 PF01037 Lrp/AsnC ligand binding domain LK428_RS17480 PF00749 tRNA synthetases class I (E and Q), catalytic domain LK428_RS17485 PF13607 Succinyl-CoA ligase like flavodoxin domain LK428_RS17485 PF13380 CoA binding domain LK428_RS17485 PF00583 Acetyltransferase (GNAT) family LK428_RS17495 PF07171 MlrC C-terminus LK428_RS17495 PF07364 Metallopeptidase family M81 LK428_RS17505 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS17510 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS17515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS17520 PF00171 Aldehyde dehydrogenase family LK428_RS17525 PF00202 Aminotransferase class-III LK428_RS17530 PF00392 Bacterial regulatory proteins, gntR family LK428_RS17530 PF00155 Aminotransferase class I and II LK428_RS17535 PF00186 Dihydrofolate reductase LK428_RS17540 PF00303 Thymidylate synthase LK428_RS17550 PF03232 Ubiquinone biosynthesis protein COQ7 LK428_RS17555 PF00953 Glycosyl transferase family 4 LK428_RS17560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LK428_RS17560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LK428_RS17560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LK428_RS17565 PF01370 NAD dependent epimerase/dehydratase family LK428_RS17570 PF03023 Lipid II flippase MurJ LK428_RS17575 PF00534 Glycosyl transferases group 1 LK428_RS17575 PF13439 Glycosyltransferase Family 4 LK428_RS17580 PF13537 Glutamine amidotransferase domain LK428_RS17580 PF00733 Asparagine synthase LK428_RS17585 PF13439 Glycosyltransferase Family 4 LK428_RS17585 PF00534 Glycosyl transferases group 1 LK428_RS17590 PF00534 Glycosyl transferases group 1 LK428_RS17590 PF13439 Glycosyltransferase Family 4 LK428_RS17595 PF00534 Glycosyl transferases group 1 LK428_RS17595 PF13477 Glycosyl transferase 4-like LK428_RS17600 PF00342 Phosphoglucose isomerase LK428_RS17605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK428_RS17605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK428_RS17605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK428_RS17605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK428_RS17615 PF01565 FAD binding domain LK428_RS17615 PF02913 FAD linked oxidases, C-terminal domain LK428_RS17620 PF00072 Response regulator receiver domain LK428_RS17620 PF00486 Transcriptional regulatory protein, C terminal LK428_RS17625 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS17625 PF08521 Two-component sensor kinase N-terminal LK428_RS17630 PF00884 Sulfatase LK428_RS17640 PF04209 homogentisate 1,2-dioxygenase LK428_RS17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS17645 PF03466 LysR substrate binding domain LK428_RS17655 PF01494 FAD binding domain LK428_RS17665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LK428_RS17665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LK428_RS17665 PF06827 Zinc finger found in FPG and IleRS LK428_RS17675 PF03550 Outer membrane lipoprotein LolB LK428_RS17680 PF08544 GHMP kinases C terminal LK428_RS17680 PF00288 GHMP kinases N terminal domain LK428_RS17690 PF14572 Phosphoribosyl synthetase-associated domain LK428_RS17690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LK428_RS17695 PF01386 Ribosomal L25p family LK428_RS17695 PF14693 Ribosomal protein TL5, C-terminal domain LK428_RS17700 PF01195 Peptidyl-tRNA hydrolase LK428_RS17710 PF01926 50S ribosome-binding GTPase LK428_RS17710 PF06071 Protein of unknown function (DUF933) LK428_RS17715 PF13356 Arm DNA-binding domain LK428_RS17715 PF00589 Phage integrase family LK428_RS17730 PF01555 DNA methylase LK428_RS17735 PF13175 AAA ATPase domain LK428_RS17765 PF13361 UvrD-like helicase C-terminal domain LK428_RS17765 PF00580 UvrD/REP helicase N-terminal domain LK428_RS17785 PF00072 Response regulator receiver domain LK428_RS17785 PF00486 Transcriptional regulatory protein, C terminal LK428_RS17790 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS17795 PF17938 Tetracyclin repressor-like, C-terminal domain LK428_RS17795 PF00440 Bacterial regulatory proteins, tetR family LK428_RS17825 PF04228 Putative neutral zinc metallopeptidase LK428_RS17830 PF01300 Telomere recombination LK428_RS17845 PF00701 Dihydrodipicolinate synthetase family LK428_RS17850 PF06804 NlpB/DapX lipoprotein LK428_RS17855 PF16970 Type-1 fimbrial protein, A LK428_RS17860 PF08007 Cupin superfamily protein LK428_RS17865 PF01624 MutS domain I LK428_RS17865 PF05190 MutS family domain IV LK428_RS17865 PF00488 MutS domain V LK428_RS17865 PF05188 MutS domain II LK428_RS17865 PF05192 MutS domain III LK428_RS17870 PF07311 Dodecin LK428_RS17875 PF03358 NADPH-dependent FMN reductase LK428_RS17915 PF00990 Diguanylate cyclase, GGDEF domain LK428_RS17920 PF00072 Response regulator receiver domain LK428_RS17955 PF10017 Histidine-specific methyltransferase, SAM-dependent LK428_RS17965 PF13091 PLD-like domain LK428_RS17965 PF13396 Phospholipase_D-nuclease N-terminal LK428_RS17980 PF01645 Conserved region in glutamate synthase LK428_RS17985 PF04143 Sulphur transport LK428_RS17990 PF03547 Membrane transport protein LK428_RS17995 PF13673 Acetyltransferase (GNAT) domain LK428_RS18015 PF08461 Ribonuclease R winged-helix domain LK428_RS18015 PF00773 RNB domain LK428_RS18015 PF00575 S1 RNA binding domain LK428_RS18015 PF08206 Ribonuclease B OB domain LK428_RS18015 PF17876 Cold shock domain LK428_RS18020 PF08032 RNA 2'-O ribose methyltransferase substrate binding LK428_RS18020 PF00588 SpoU rRNA Methylase family LK428_RS18025 PF01053 Cys/Met metabolism PLP-dependent enzyme LK428_RS18030 PF18331 PKHD-type hydroxylase C-terminal domain LK428_RS18030 PF13640 2OG-Fe(II) oxygenase superfamily LK428_RS18035 PF00216 Bacterial DNA-binding protein LK428_RS18050 PF01618 MotA/TolQ/ExbB proton channel family LK428_RS18055 PF02472 Biopolymer transport protein ExbD/TolR LK428_RS18060 PF00072 Response regulator receiver domain LK428_RS18060 PF00486 Transcriptional regulatory protein, C terminal LK428_RS18065 PF08521 Two-component sensor kinase N-terminal LK428_RS18065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS18065 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS18070 PF02705 K+ potassium transporter LK428_RS18075 PF00764 Arginosuccinate synthase LK428_RS18080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LK428_RS18080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LK428_RS18085 PF00202 Aminotransferase class-III LK428_RS18095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS18095 PF03466 LysR substrate binding domain LK428_RS18105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK428_RS18105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK428_RS18110 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS18125 PF00392 Bacterial regulatory proteins, gntR family LK428_RS18125 PF07729 FCD domain LK428_RS18135 PF07690 Major Facilitator Superfamily LK428_RS18145 PF02627 Carboxymuconolactone decarboxylase family LK428_RS18150 PF00578 AhpC/TSA family LK428_RS18155 PF00512 His Kinase A (phospho-acceptor) domain LK428_RS18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK428_RS18155 PF00672 HAMP domain LK428_RS18165 PF00486 Transcriptional regulatory protein, C terminal LK428_RS18165 PF00072 Response regulator receiver domain LK428_RS18170 PF00814 Glycoprotease family LK428_RS18175 PF03167 Uracil DNA glycosylase superfamily LK428_RS18180 PF07690 Major Facilitator Superfamily LK428_RS18185 PF06470 SMC proteins Flexible Hinge Domain LK428_RS18185 PF02463 RecF/RecN/SMC N terminal domain LK428_RS18195 PF03120 NAD-dependent DNA ligase OB-fold domain LK428_RS18195 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LK428_RS18195 PF01653 NAD-dependent DNA ligase adenylation domain LK428_RS18195 PF12826 Helix-hairpin-helix motif LK428_RS18195 PF00533 BRCA1 C Terminus (BRCT) domain LK428_RS18205 PF01722 BolA-like protein LK428_RS18210 PF04279 Intracellular septation protein A LK428_RS18215 PF01641 SelR domain LK428_RS18220 PF00005 ABC transporter LK428_RS18225 PF02361 Cobalt transport protein LK428_RS18230 PF02632 BioY family LK428_RS18245 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS18245 PF00005 ABC transporter LK428_RS18250 PF01063 Amino-transferase class IV LK428_RS18265 PF02653 Branched-chain amino acid transport system / permease component LK428_RS18275 PF00005 ABC transporter LK428_RS18280 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK428_RS18280 PF00005 ABC transporter LK428_RS18285 PF10576 Iron-sulfur binding domain of endonuclease III LK428_RS18285 PF00633 Helix-hairpin-helix motif LK428_RS18285 PF00730 HhH-GPD superfamily base excision DNA repair protein LK428_RS18290 PF04060 Putative Fe-S cluster LK428_RS18300 PF00175 Oxidoreductase NAD-binding domain LK428_RS18300 PF00970 Oxidoreductase FAD-binding domain LK428_RS18305 PF11953 Domain of unknown function (DUF3470) LK428_RS18305 PF00037 4Fe-4S binding domain LK428_RS18310 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LK428_RS18310 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LK428_RS18315 PF01042 Endoribonuclease L-PSP LK428_RS18325 PF06167 Glucose-regulated metallo-peptidase M90 LK428_RS18330 PF13291 ACT domain LK428_RS18330 PF04607 Region found in RelA / SpoT proteins LK428_RS18330 PF02824 TGS domain LK428_RS18335 PF07687 Peptidase dimerisation domain LK428_RS18335 PF01546 Peptidase family M20/M25/M40 LK428_RS18350 PF00291 Pyridoxal-phosphate dependent enzyme LK428_RS18355 PF00290 Tryptophan synthase alpha chain LK428_RS18360 PF01039 Carboxyl transferase domain LK428_RS18360 PF17848 Acetyl-coA carboxylase zinc finger domain LK428_RS18380 PF12111 Polyribonucleotide phosphorylase C terminal LK428_RS18380 PF10150 Ribonuclease E/G family LK428_RS18380 PF00575 S1 RNA binding domain LK428_RS18385 PF00849 RNA pseudouridylate synthase LK428_RS18385 PF01479 S4 domain LK428_RS18390 PF13419 Haloacid dehalogenase-like hydrolase LK428_RS18395 PF00174 Oxidoreductase molybdopterin binding domain LK428_RS18400 PF01794 Ferric reductase like transmembrane component LK428_RS18410 PF01510 N-acetylmuramoyl-L-alanine amidase LK428_RS18420 PF02545 Maf-like protein LK428_RS18425 PF02620 Large ribosomal RNA subunit accumulation protein YceD LK428_RS18430 PF01783 Ribosomal L32p protein family LK428_RS18435 PF02504 Fatty acid synthesis protein LK428_RS18440 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LK428_RS18440 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LK428_RS18445 PF00698 Acyl transferase domain LK428_RS18455 PF00550 Phosphopantetheine attachment site LK428_RS18460 PF00109 Beta-ketoacyl synthase, N-terminal domain LK428_RS18460 PF02801 Beta-ketoacyl synthase, C-terminal domain LK428_RS18470 PF04542 Sigma-70 region 2 LK428_RS18470 PF08281 Sigma-70, region 4 LK428_RS18485 PF13180 PDZ domain LK428_RS18490 PF06421 GTP-binding protein LepA C-terminus LK428_RS18490 PF03144 Elongation factor Tu domain 2 LK428_RS18490 PF00009 Elongation factor Tu GTP binding domain LK428_RS18490 PF00679 Elongation factor G C-terminus LK428_RS18495 PF10502 Signal peptidase, peptidase S26 LK428_RS18500 PF14622 Ribonuclease-III-like LK428_RS18500 PF00035 Double-stranded RNA binding motif LK428_RS18505 PF07650 KH domain LK428_RS18505 PF01926 50S ribosome-binding GTPase LK428_RS18510 PF02565 Recombination protein O C terminal LK428_RS18510 PF11967 Recombination protein O N terminal LK428_RS18520 PF00291 Pyridoxal-phosphate dependent enzyme LK428_RS18530 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS18535 PF01027 Inhibitor of apoptosis-promoting Bax1 LK428_RS18545 PF04364 DNA polymerase III chi subunit, HolC LK428_RS18550 PF02789 Cytosol aminopeptidase family, N-terminal domain LK428_RS18550 PF00883 Cytosol aminopeptidase family, catalytic domain LK428_RS18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS18560 PF03466 LysR substrate binding domain LK428_RS18570 PF00171 Aldehyde dehydrogenase family LK428_RS18575 PF03466 LysR substrate binding domain LK428_RS18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS18590 PF00877 NlpC/P60 family LK428_RS18600 PF03928 Haem-degrading LK428_RS18615 PF16177 Acetyl-coenzyme A synthetase N-terminus LK428_RS18615 PF00501 AMP-binding enzyme LK428_RS18615 PF13193 AMP-binding enzyme C-terminal domain LK428_RS18620 PF00892 EamA-like transporter family LK428_RS18650 PF16363 GDP-mannose 4,6 dehydratase LK428_RS18680 PF01112 Asparaginase LK428_RS18685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS18685 PF00005 ABC transporter LK428_RS18690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS18695 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS18700 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS18700 PF12911 N-terminal TM domain of oligopeptide transport permease C LK428_RS18705 PF03576 Peptidase family S58 LK428_RS18715 PF01321 Creatinase/Prolidase N-terminal domain LK428_RS18715 PF00557 Metallopeptidase family M24 LK428_RS18720 PF06418 CTP synthase N-terminus LK428_RS18720 PF00117 Glutamine amidotransferase class-I LK428_RS18725 PF00793 DAHP synthetase I family LK428_RS18735 PF03952 Enolase, N-terminal domain LK428_RS18735 PF00113 Enolase, C-terminal TIM barrel domain LK428_RS18740 PF04977 Septum formation initiator LK428_RS18745 PF00211 Adenylate and Guanylate cyclase catalytic domain LK428_RS18770 PF01430 Hsp33 protein LK428_RS18780 PF13193 AMP-binding enzyme C-terminal domain LK428_RS18780 PF16177 Acetyl-coenzyme A synthetase N-terminus LK428_RS18780 PF00501 AMP-binding enzyme LK428_RS18800 PF02926 THUMP domain LK428_RS18800 PF01170 Putative RNA methylase family UPF0020 LK428_RS18805 PF03653 Uncharacterised protein family (UPF0093) LK428_RS18810 PF03972 MmgE/PrpD family LK428_RS18815 PF04303 PrpF protein LK428_RS18820 PF00330 Aconitase family (aconitate hydratase) LK428_RS18820 PF00694 Aconitase C-terminal domain LK428_RS18825 PF00285 Citrate synthase, C-terminal domain LK428_RS18835 PF00056 lactate/malate dehydrogenase, NAD binding domain LK428_RS18835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LK428_RS18840 PF07702 UTRA domain LK428_RS18840 PF00392 Bacterial regulatory proteins, gntR family LK428_RS18845 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LK428_RS18850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LK428_RS18855 PF00890 FAD binding domain LK428_RS18855 PF02910 Fumarate reductase flavoprotein C-term LK428_RS18860 PF13085 2Fe-2S iron-sulfur cluster binding domain LK428_RS18865 PF03937 Flavinator of succinate dehydrogenase LK428_RS18870 PF00285 Citrate synthase, C-terminal domain LK428_RS18890 PF00893 Small Multidrug Resistance protein LK428_RS18895 PF01713 Smr domain LK428_RS18895 PF00488 MutS domain V LK428_RS18900 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK428_RS18905 PF09397 Ftsk gamma domain LK428_RS18905 PF17854 FtsK alpha domain LK428_RS18905 PF01580 FtsK/SpoIIIE family LK428_RS18905 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LK428_RS18910 PF03548 Outer membrane lipoprotein carrier protein LolA LK428_RS18915 PF12002 MgsA AAA+ ATPase C terminal LK428_RS18915 PF16193 AAA C-terminal domain LK428_RS18915 PF00004 ATPase family associated with various cellular activities (AAA) LK428_RS18920 PF02403 Seryl-tRNA synthetase N-terminal domain LK428_RS18920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK428_RS18945 PF00990 Diguanylate cyclase, GGDEF domain LK428_RS18945 PF17151 Periplasmic sensor domain LK428_RS18960 PF00593 TonB dependent receptor LK428_RS18960 PF07660 Secretin and TonB N terminus short domain LK428_RS18960 PF07715 TonB-dependent Receptor Plug Domain LK428_RS18965 PF07690 Major Facilitator Superfamily LK428_RS18985 PF06276 Ferric iron reductase FhuF-like transporter LK428_RS18985 PF04183 IucA / IucC family LK428_RS18995 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LK428_RS19005 PF02254 TrkA-N domain LK428_RS19005 PF00999 Sodium/hydrogen exchanger family LK428_RS19010 PF00106 short chain dehydrogenase LK428_RS19020 PF03883 Peroxide stress protein YaaA LK428_RS19045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK428_RS19045 PF00205 Thiamine pyrophosphate enzyme, central domain LK428_RS19045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK428_RS19050 PF10369 Small subunit of acetolactate synthase LK428_RS19055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LK428_RS19055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LK428_RS19060 PF01066 CDP-alcohol phosphatidyltransferase LK428_RS19070 PF00312 Ribosomal protein S15 LK428_RS19075 PF00013 KH domain LK428_RS19075 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LK428_RS19075 PF01138 3' exoribonuclease family, domain 1 LK428_RS19075 PF03725 3' exoribonuclease family, domain 2 LK428_RS19075 PF00575 S1 RNA binding domain LK428_RS19095 PF06463 Molybdenum Cofactor Synthesis C LK428_RS19095 PF04055 Radical SAM superfamily LK428_RS19100 PF00994 Probable molybdopterin binding domain LK428_RS19100 PF03453 MoeA N-terminal region (domain I and II) LK428_RS19100 PF03454 MoeA C-terminal region (domain IV) LK428_RS19105 PF00994 Probable molybdopterin binding domain LK428_RS19110 PF02391 MoaE protein LK428_RS19120 PF01967 MoaC family LK428_RS19130 PF01738 Dienelactone hydrolase family LK428_RS19140 PF08534 Redoxin LK428_RS19155 PF04055 Radical SAM superfamily LK428_RS19155 PF06968 Biotin and Thiamin Synthesis associated domain LK428_RS19190 PF00248 Aldo/keto reductase family LK428_RS19195 PF00795 Carbon-nitrogen hydrolase LK428_RS19200 PF00571 CBS domain LK428_RS19200 PF03471 Transporter associated domain LK428_RS19205 PF02130 Uncharacterized protein family UPF0054 LK428_RS19210 PF02562 PhoH-like protein LK428_RS19215 PF04055 Radical SAM superfamily LK428_RS19215 PF01938 TRAM domain LK428_RS19215 PF00919 Uncharacterized protein family UPF0004 LK428_RS19235 PF02355 Protein export membrane protein LK428_RS19235 PF07549 SecD/SecF GG Motif LK428_RS19240 PF07549 SecD/SecF GG Motif LK428_RS19240 PF13721 SecD export protein N-terminal TM region LK428_RS19240 PF02355 Protein export membrane protein LK428_RS19245 PF02699 Preprotein translocase subunit LK428_RS19250 PF01702 Queuine tRNA-ribosyltransferase LK428_RS19255 PF02547 Queuosine biosynthesis protein LK428_RS19260 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LK428_RS19275 PF03797 Autotransporter beta-domain LK428_RS19275 PF03212 Pertactin LK428_RS19280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK428_RS19280 PF14824 Sirohaem biosynthesis protein central LK428_RS19280 PF10414 Sirohaem synthase dimerisation region LK428_RS19305 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LK428_RS19310 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LK428_RS19310 PF01464 Transglycosylase SLT domain LK428_RS19315 PF00155 Aminotransferase class I and II LK428_RS19325 PF00390 Malic enzyme, N-terminal domain LK428_RS19325 PF01515 Phosphate acetyl/butaryl transferase LK428_RS19325 PF03949 Malic enzyme, NAD binding domain LK428_RS19335 PF01337 Barstar (barnase inhibitor) LK428_RS19360 PF00596 Class II Aldolase and Adducin N-terminal domain LK428_RS19365 PF03480 Bacterial extracellular solute-binding protein, family 7 LK428_RS19370 PF01242 6-pyruvoyl tetrahydropterin synthase LK428_RS19380 PF00472 RF-1 domain LK428_RS19400 PF00701 Dihydrodipicolinate synthetase family LK428_RS19405 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS19430 PF00890 FAD binding domain LK428_RS19430 PF14537 Cytochrome c3 LK428_RS19435 PF03401 Tripartite tricarboxylate transporter family receptor LK428_RS19450 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LK428_RS19450 PF01266 FAD dependent oxidoreductase LK428_RS19455 PF08220 DeoR-like helix-turn-helix domain LK428_RS19455 PF00455 DeoR C terminal sensor domain LK428_RS19465 PF17912 MalK OB fold domain LK428_RS19465 PF00005 ABC transporter LK428_RS19475 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS19500 PF01037 Lrp/AsnC ligand binding domain LK428_RS19505 PF01266 FAD dependent oxidoreductase LK428_RS19510 PF12320 Type 5 capsule protein repressor C-terminal domain LK428_RS19510 PF00149 Calcineurin-like phosphoesterase LK428_RS19535 PF00478 IMP dehydrogenase / GMP reductase domain LK428_RS19535 PF00571 CBS domain LK428_RS19540 PF02540 NAD synthase LK428_RS19540 PF00958 GMP synthase C terminal domain LK428_RS19540 PF00117 Glutamine amidotransferase class-I LK428_RS19550 PF13657 HipA N-terminal domain LK428_RS19550 PF07804 HipA-like C-terminal domain LK428_RS19560 PF07690 Major Facilitator Superfamily LK428_RS19575 PF01979 Amidohydrolase family LK428_RS19585 PF00005 ABC transporter LK428_RS19590 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS19610 PF01965 DJ-1/PfpI family LK428_RS19615 PF01740 STAS domain LK428_RS19615 PF00916 Sulfate permease family LK428_RS19640 PF12706 Beta-lactamase superfamily domain LK428_RS19645 PF12833 Helix-turn-helix domain LK428_RS19645 PF01965 DJ-1/PfpI family LK428_RS19650 PF03466 LysR substrate binding domain LK428_RS19650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK428_RS19665 PF08240 Alcohol dehydrogenase GroES-like domain LK428_RS19665 PF00107 Zinc-binding dehydrogenase LK428_RS19670 PF07690 Major Facilitator Superfamily LK428_RS19685 PF00155 Aminotransferase class I and II LK428_RS19685 PF00392 Bacterial regulatory proteins, gntR family LK428_RS19695 PF01810 LysE type translocator LK428_RS19710 PF01546 Peptidase family M20/M25/M40 LK428_RS19710 PF07687 Peptidase dimerisation domain LK428_RS19715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK428_RS19720 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS19725 PF12911 N-terminal TM domain of oligopeptide transport permease C LK428_RS19725 PF00528 Binding-protein-dependent transport system inner membrane component LK428_RS19730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS19730 PF00005 ABC transporter LK428_RS19735 PF00356 Bacterial regulatory proteins, lacI family LK428_RS19765 PF09335 SNARE associated Golgi protein LK428_RS19780 PF13847 Methyltransferase domain LK428_RS19810 PF00216 Bacterial DNA-binding protein LK428_RS19815 PF03147 Ferredoxin-fold anticodon binding domain LK428_RS19815 PF03484 tRNA synthetase B5 domain LK428_RS19815 PF01588 Putative tRNA binding domain LK428_RS19815 PF03483 B3/4 domain LK428_RS19815 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LK428_RS19845 PF03812 2-keto-3-deoxygluconate permease LK428_RS19860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LK428_RS19920 PF00005 ABC transporter LK428_RS19920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK428_RS19950 PF00501 AMP-binding enzyme LK428_RS19950 PF13193 AMP-binding enzyme C-terminal domain LK428_RS19950 PF00668 Condensation domain LK428_RS19950 PF00550 Phosphopantetheine attachment site LK428_RS19950 PF00975 Thioesterase domain LK428_RS19955 PF00501 AMP-binding enzyme LK428_RS19955 PF13193 AMP-binding enzyme C-terminal domain