AVS48_RS00005	SM01228	AVS48_RS00005
AVS48_RS00025	SM00470	ParB-like nuclease domain
AVS48_RS00030	SM00870	AVS48_RS00030
AVS48_RS00070	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AVS48_RS00070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AVS48_RS00075	SM00649	Ribosomal protein L11/L12
AVS48_RS00100	SM00663	RNA polymerase I subunit A N-terminus
AVS48_RS00130	SM00448	cheY-homologous receiver domain
AVS48_RS00130	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS00200	SM00563	Phosphate acyltransferases
AVS48_RS00240	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS00290	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS00305	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS00400	SM00387	Histidine kinase-like ATPases
AVS48_RS00410	SM00644	AVS48_RS00410
AVS48_RS00425	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS00425	SM00962	SRP54-type protein, GTPase domain
AVS48_RS00425	SM00963	SRP54-type protein, helical bundle domain
AVS48_RS00525	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS00545	SM00936	Penicillin-binding protein 5, C-terminal domain 
AVS48_RS00565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVS48_RS00610	SM00836	DALR anticodon binding domain
AVS48_RS00610	SM01016	Arginyl tRNA synthetase N terminal dom
AVS48_RS00645	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS00660	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS00695	SM00917	LeuA allosteric (dimerisation) domain
AVS48_RS00750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS00750	SM00895	AVS48_RS00750
AVS48_RS00780	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS00790	SM00797	Allophanate hydrolase subunit 2
AVS48_RS00795	SM00796	Allophanate hydrolase subunit 1
AVS48_RS00820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS00820	SM00387	Histidine kinase-like ATPases
AVS48_RS00820	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS00825	SM00448	cheY-homologous receiver domain
AVS48_RS00825	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS00830	SM00091	PAS domain
AVS48_RS00830	SM00387	Histidine kinase-like ATPases
AVS48_RS00830	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS00835	SM00448	cheY-homologous receiver domain
AVS48_RS00835	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS00845	SM00978	AVS48_RS00845
AVS48_RS00870	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS00885	SM00487	DEAD-like helicases superfamily
AVS48_RS00885	SM00490	helicase superfamily c-terminal domain
AVS48_RS00930	SM00450	Rhodanese Homology Domain
AVS48_RS01025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS01025	SM00895	AVS48_RS01025
AVS48_RS01075	SM00882	Coenzyme A transferase
AVS48_RS01080	SM00882	Coenzyme A transferase
AVS48_RS01085	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS01105	SM00869	Autotransporter beta-domain
AVS48_RS01140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS01140	SM00895	AVS48_RS01140
AVS48_RS01210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS01210	SM00895	AVS48_RS01210
AVS48_RS01250	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS01265	SM00853	MutL C terminal dimerisation domain
AVS48_RS01265	SM01340	AVS48_RS01265
AVS48_RS01275	SM00646	AVS48_RS01275
AVS48_RS01355	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS01360	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS01445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVS48_RS01475	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS01485	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS01535	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVS48_RS01560	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS01565	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS01635	SM00732	Likely ribonuclease with RNase H fold.
AVS48_RS01650	SM00563	Phosphate acyltransferases
AVS48_RS01700	SM00849	Metallo-beta-lactamase superfamily
AVS48_RS01730	SM00267	diguanylate cyclase
AVS48_RS01755	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS01775	SM00965	Secretin and TonB N terminus short domain
AVS48_RS01820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS01820	SM00895	AVS48_RS01820
AVS48_RS01835	SM01236	AVS48_RS01835
AVS48_RS01855	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS01880	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AVS48_RS01895	SM00845	GatB domain
AVS48_RS01970	SM00749	bacterial OsmY and nodulation domain
AVS48_RS02035	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS02075	SM00450	Rhodanese Homology Domain
AVS48_RS02180	SM00479	AVS48_RS02180
AVS48_RS02210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS02215	SM00838	Elongation factor G C-terminus
AVS48_RS02215	SM00889	Elongation factor G, domain IV
AVS48_RS02285	SM00357	Cold shock protein domain
AVS48_RS02295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS02295	SM00895	AVS48_RS02295
AVS48_RS02310	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AVS48_RS02375	SM00363	S4 RNA-binding domain
AVS48_RS02380	SM00316	Ribosomal protein S1-like RNA-binding domain
AVS48_RS02420	SM00954	Region found in RelA / SpoT proteins
AVS48_RS02465	SM00478	endonuclease III
AVS48_RS02465	SM00525	AVS48_RS02465
AVS48_RS02470	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS02475	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS02505	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS02530	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS02555	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVS48_RS02555	SM00292	breast cancer carboxy-terminal domain
AVS48_RS02555	SM00532	Ligase N family
AVS48_RS02560	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AVS48_RS02565	SM00968	SMC proteins Flexible Hinge Domain
AVS48_RS02575	SM00986	Uracil DNA glycosylase superfamily
AVS48_RS02575	SM00987	UreE urease accessory protein, C-terminal domain 
AVS48_RS02585	SM00448	cheY-homologous receiver domain
AVS48_RS02585	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS02600	SM00387	Histidine kinase-like ATPases
AVS48_RS02600	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS02615	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS02630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS02630	SM00895	AVS48_RS02630
AVS48_RS02635	SM01130	AVS48_RS02635
AVS48_RS02690	SM00387	Histidine kinase-like ATPases
AVS48_RS02690	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS02695	SM00448	cheY-homologous receiver domain
AVS48_RS02695	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS02720	SM00411	bacterial (prokaryotic) histone like domain
AVS48_RS02725	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AVS48_RS02735	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AVS48_RS02740	SM00316	Ribosomal protein S1-like RNA-binding domain
AVS48_RS02740	SM00357	Cold shock protein domain
AVS48_RS02740	SM00955	AVS48_RS02740
AVS48_RS02750	SM01144	AVS48_RS02750
AVS48_RS02785	SM00155	Phospholipase D. Active site motifs.
AVS48_RS02830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVS48_RS02835	SM00267	diguanylate cyclase
AVS48_RS02890	SM00883	Chaperonin 10 Kd subunit
AVS48_RS02900	SM00869	Autotransporter beta-domain
AVS48_RS02920	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AVS48_RS02960	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS03000	SM00880	AVS48_RS03000
AVS48_RS03005	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS03005	SM00962	SRP54-type protein, GTPase domain
AVS48_RS03005	SM00963	SRP54-type protein, helical bundle domain
AVS48_RS03040	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AVS48_RS03070	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS03090	SM00919	Malic enzyme, NAD binding domain
AVS48_RS03090	SM01274	AVS48_RS03090
AVS48_RS03110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS03110	SM00895	AVS48_RS03110
AVS48_RS03190	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS03195	SM00852	Probable molybdopterin binding domain
AVS48_RS03215	SM00487	DEAD-like helicases superfamily
AVS48_RS03215	SM00490	helicase superfamily c-terminal domain
AVS48_RS03290	SM01011	Aminopeptidase P, N-terminal domain
AVS48_RS03315	SM00798	AICARFT/IMPCHase bienzyme
AVS48_RS03315	SM00851	MGS-like domain
AVS48_RS03325	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVS48_RS03340	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS03345	SM00341	Helicase and RNase D C-terminal
AVS48_RS03345	SM00487	DEAD-like helicases superfamily
AVS48_RS03345	SM00490	helicase superfamily c-terminal domain
AVS48_RS03345	SM00956	AVS48_RS03345
AVS48_RS03360	SM00947	Carbonic anhydrase
AVS48_RS03385	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS03390	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS03630	SM00448	cheY-homologous receiver domain
AVS48_RS03630	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS03685	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS03735	SM00650	Ribosomal RNA adenine dimethylases
AVS48_RS03800	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS03820	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS03850	SM00867	YceI-like domain 
AVS48_RS03855	SM00965	Secretin and TonB N terminus short domain
AVS48_RS03880	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS03890	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS03895	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS03900	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AVS48_RS03980	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS04000	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS04015	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS04045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS04045	SM00895	AVS48_RS04045
AVS48_RS04050	SM00869	Autotransporter beta-domain
AVS48_RS04055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS04055	SM00895	AVS48_RS04055
AVS48_RS04060	SM00829	Enoylreductase
AVS48_RS04080	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS04140	SM00487	DEAD-like helicases superfamily
AVS48_RS04140	SM00490	helicase superfamily c-terminal domain
AVS48_RS04140	SM00982	AVS48_RS04140
AVS48_RS04140	SM01058	CarD-like/TRCF domain
AVS48_RS04225	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AVS48_RS04230	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AVS48_RS04290	SM00014	Acid phosphatase homologues
AVS48_RS04350	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS04375	SM00450	Rhodanese Homology Domain
AVS48_RS04435	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS04460	SM00829	Enoylreductase
AVS48_RS04490	SM00316	Ribosomal protein S1-like RNA-binding domain
AVS48_RS04490	SM00322	K homology RNA-binding domain
AVS48_RS04495	SM01387	AVS48_RS04495
AVS48_RS04540	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS04620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS04620	SM00866	AVS48_RS04620
AVS48_RS04625	SM00878	Biotin carboxylase C-terminal domain
AVS48_RS04675	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS04785	SM00434	DNA Topoisomerase IV
AVS48_RS04795	SM00830	Chorismate mutase type II
AVS48_RS04815	SM00316	Ribosomal protein S1-like RNA-binding domain
AVS48_RS04820	SM00411	bacterial (prokaryotic) histone like domain
AVS48_RS04870	SM00893	Electron transfer flavoprotein domain
AVS48_RS04875	SM00893	Electron transfer flavoprotein domain
AVS48_RS04910	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS04925	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVS48_RS04975	SM00363	S4 RNA-binding domain
AVS48_RS05020	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS05020	SM00448	cheY-homologous receiver domain
AVS48_RS05025	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVS48_RS05025	SM00091	PAS domain
AVS48_RS05025	SM00387	Histidine kinase-like ATPases
AVS48_RS05025	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS05060	SM00861	Transketolase, pyrimidine binding domain
AVS48_RS05065	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AVS48_RS05120	SM00271	DnaJ molecular chaperone homology domain
AVS48_RS05140	SM00852	Probable molybdopterin binding domain
AVS48_RS05160	SM00316	Ribosomal protein S1-like RNA-binding domain
AVS48_RS05195	SM00448	cheY-homologous receiver domain
AVS48_RS05200	SM00073	Histidine Phosphotransfer domain
AVS48_RS05200	SM00260	Two component signalling adaptor domain
AVS48_RS05200	SM00387	Histidine kinase-like ATPases
AVS48_RS05200	SM01231	AVS48_RS05200
AVS48_RS05205	SM00260	Two component signalling adaptor domain
AVS48_RS05210	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVS48_RS05210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS05220	SM00448	cheY-homologous receiver domain
AVS48_RS05225	SM00448	cheY-homologous receiver domain
AVS48_RS05265	SM01091	Transporter associated domain
AVS48_RS05280	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVS48_RS05305	SM01323	AVS48_RS05305
AVS48_RS05335	SM00869	Autotransporter beta-domain
AVS48_RS05385	SM00919	Malic enzyme, NAD binding domain
AVS48_RS05385	SM01274	AVS48_RS05385
AVS48_RS05410	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS05455	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS05465	SM01103	AVS48_RS05465
AVS48_RS05505	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVS48_RS05525	SM00448	cheY-homologous receiver domain
AVS48_RS05525	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS05530	SM00052	Putative diguanylate phosphodiesterase
AVS48_RS05530	SM00267	diguanylate cyclase
AVS48_RS05530	SM00387	Histidine kinase-like ATPases
AVS48_RS05530	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS05540	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS05560	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS05585	SM00822	AVS48_RS05585
AVS48_RS05610	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS05620	SM00869	Autotransporter beta-domain
AVS48_RS05645	SM00849	Metallo-beta-lactamase superfamily
AVS48_RS05655	SM00481	DNA polymerase alpha chain like domain
AVS48_RS05675	SM00919	Malic enzyme, NAD binding domain
AVS48_RS05675	SM01274	AVS48_RS05675
AVS48_RS05685	SM00344	helix_turn_helix ASNC type
AVS48_RS05695	SM00861	Transketolase, pyrimidine binding domain
AVS48_RS05760	SM00316	Ribosomal protein S1-like RNA-binding domain
AVS48_RS05760	SM00732	Likely ribonuclease with RNase H fold.
AVS48_RS05765	SM00491	AVS48_RS05765
AVS48_RS05775	SM00363	S4 RNA-binding domain
AVS48_RS05790	SM00822	AVS48_RS05790
AVS48_RS05845	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AVS48_RS05855	SM00822	AVS48_RS05855
AVS48_RS05880	SM01007	Class II Aldolase and Adducin N-terminal domain
AVS48_RS05945	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS05960	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS06030	SM00100	Cyclic nucleotide-monophosphate binding domain
AVS48_RS06030	SM00419	helix_turn_helix, cAMP Regulatory protein
AVS48_RS06035	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS06035	SM01086	C-terminal, D2-small domain, of ClpB protein
AVS48_RS06050	SM00869	Autotransporter beta-domain
AVS48_RS06055	SM00869	Autotransporter beta-domain
AVS48_RS06120	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS06155	SM01005	Alanine racemase, C-terminal domain
AVS48_RS06180	SM00327	von Willebrand factor (vWF) type A domain
AVS48_RS06185	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS06260	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AVS48_RS06285	SM00363	S4 RNA-binding domain
AVS48_RS06295	SM00316	Ribosomal protein S1-like RNA-binding domain
AVS48_RS06335	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AVS48_RS06335	SM00474	3'-5' exonuclease
AVS48_RS06335	SM00475	5'-3' exonuclease
AVS48_RS06335	SM00482	DNA polymerase A domain
AVS48_RS06375	SM00357	Cold shock protein domain
AVS48_RS06375	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS06375	SM00959	Rho termination factor, N-terminal domain
AVS48_RS06385	SM00387	Histidine kinase-like ATPases
AVS48_RS06385	SM00433	TopoisomeraseII
AVS48_RS06395	SM00434	DNA Topoisomerase IV
AVS48_RS06480	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS06515	SM00953	AVS48_RS06515
AVS48_RS06645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS06665	SM00642	Alpha-amylase domain
AVS48_RS06675	SM00642	Alpha-amylase domain
AVS48_RS06680	SM00642	Alpha-amylase domain
AVS48_RS06685	SM00642	Alpha-amylase domain
AVS48_RS06690	SM00642	Alpha-amylase domain
AVS48_RS06695	SM00642	Alpha-amylase domain
AVS48_RS06740	SM00155	Phospholipase D. Active site motifs.
AVS48_RS06765	SM00869	Autotransporter beta-domain
AVS48_RS06790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS06790	SM00895	AVS48_RS06790
AVS48_RS06795	SM00881	CoA binding domain
AVS48_RS06820	SM00354	helix_turn _helix lactose operon repressor
AVS48_RS06840	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AVS48_RS06855	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS06865	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS06890	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS06890	SM00962	SRP54-type protein, GTPase domain
AVS48_RS06905	SM00858	AVS48_RS06905
AVS48_RS06950	SM00047	Lysozyme subfamily 2
AVS48_RS06965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVS48_RS06965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS06970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVS48_RS06970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS06975	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVS48_RS06975	SM00091	PAS domain
AVS48_RS06975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVS48_RS06975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS07040	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS07135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVS48_RS07180	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVS48_RS07190	SM00935	Outer membrane protein (OmpH-like)
AVS48_RS07250	SM00244	prohibitin homologues
AVS48_RS07255	SM00267	diguanylate cyclase
AVS48_RS07320	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AVS48_RS07325	SM00851	MGS-like domain
AVS48_RS07325	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AVS48_RS07335	SM00855	Phosphoglycerate mutase family
AVS48_RS07345	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS07365	SM00052	Putative diguanylate phosphodiesterase
AVS48_RS07385	SM00852	Probable molybdopterin binding domain
AVS48_RS07425	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AVS48_RS07460	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS07480	SM01329	AVS48_RS07480
AVS48_RS07485	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AVS48_RS07545	SM00644	AVS48_RS07545
AVS48_RS07580	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AVS48_RS07585	SM00822	AVS48_RS07585
AVS48_RS07595	SM00825	Beta-ketoacyl synthase
AVS48_RS07620	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVS48_RS07625	SM00838	Elongation factor G C-terminus
AVS48_RS07635	SM00358	Double-stranded RNA binding motif
AVS48_RS07635	SM00535	Ribonuclease III family
AVS48_RS07795	SM00882	Coenzyme A transferase
AVS48_RS07810	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS07865	SM01192	AVS48_RS07865
AVS48_RS07865	SM01193	AVS48_RS07865
AVS48_RS07875	SM00028	Tetratricopeptide repeats
AVS48_RS07875	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS07930	SM00981	AVS48_RS07930
AVS48_RS07970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS07970	SM00866	AVS48_RS07970
AVS48_RS08055	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS08120	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS08120	SM00487	DEAD-like helicases superfamily
AVS48_RS08120	SM00490	helicase superfamily c-terminal domain
AVS48_RS08120	SM00847	Helicase associated domain (HA2)  Add an annotation
AVS48_RS08130	SM00481	DNA polymerase alpha chain like domain
AVS48_RS08185	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS08205	SM00316	Ribosomal protein S1-like RNA-binding domain
AVS48_RS08245	SM00869	Autotransporter beta-domain
AVS48_RS08275	SM01209	AVS48_RS08275
AVS48_RS08275	SM01210	AVS48_RS08275
AVS48_RS08340	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS08360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS08365	SM01329	AVS48_RS08365
AVS48_RS08385	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVS48_RS08400	SM00829	Enoylreductase
AVS48_RS08415	SM00450	Rhodanese Homology Domain
AVS48_RS08430	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS08475	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVS48_RS08475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS08590	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS08665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS08665	SM00331	Sigma factor PP2C-like phosphatases
AVS48_RS08665	SM01049	AVS48_RS08665
AVS48_RS08675	SM01005	Alanine racemase, C-terminal domain
AVS48_RS08690	SM00155	Phospholipase D. Active site motifs.
AVS48_RS08700	SM00869	Autotransporter beta-domain
AVS48_RS08735	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVS48_RS08780	SM01207	AVS48_RS08780
AVS48_RS08795	SM00257	Lysin motif
AVS48_RS08820	SM00422	helix_turn_helix, mercury resistance
AVS48_RS08875	SM00749	bacterial OsmY and nodulation domain
AVS48_RS08940	SM00344	helix_turn_helix ASNC type
AVS48_RS08965	SM00904	Riboflavin kinase
AVS48_RS08995	SM00965	Secretin and TonB N terminus short domain
AVS48_RS09000	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS09035	SM00869	Autotransporter beta-domain
AVS48_RS09050	SM00357	Cold shock protein domain
AVS48_RS09080	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS09080	SM00994	ClpX C4-type zinc finger
AVS48_RS09080	SM01086	C-terminal, D2-small domain, of ClpB protein
AVS48_RS09085	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS09085	SM00464	Found in ATP-dependent protease La (LON)
AVS48_RS09140	SM00882	Coenzyme A transferase
AVS48_RS09145	SM00882	Coenzyme A transferase
AVS48_RS09175	SM00869	Autotransporter beta-domain
AVS48_RS09190	SM00487	DEAD-like helicases superfamily
AVS48_RS09190	SM00490	helicase superfamily c-terminal domain
AVS48_RS09195	SM00226	Low molecular weight phosphatase family
AVS48_RS09220	SM00271	DnaJ molecular chaperone homology domain
AVS48_RS09275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS09275	SM00866	AVS48_RS09275
AVS48_RS09335	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS09385	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AVS48_RS09435	SM00387	Histidine kinase-like ATPases
AVS48_RS09435	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS09440	SM00448	cheY-homologous receiver domain
AVS48_RS09455	SM00562	AVS48_RS09455
AVS48_RS09485	SM00564	beta-propeller repeat
AVS48_RS09490	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS09510	SM00244	prohibitin homologues
AVS48_RS09515	SM00244	prohibitin homologues
AVS48_RS09525	SM00788	Adenylosuccinate synthetase
AVS48_RS09540	SM00400	zinc finger
AVS48_RS09540	SM00493	AVS48_RS09540
AVS48_RS09540	SM00766	DNA primase DnaG DnaB-binding
AVS48_RS09590	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS09695	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS09735	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS09755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AVS48_RS09770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS09770	SM00895	AVS48_RS09770
AVS48_RS09790	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS09825	SM00464	Found in ATP-dependent protease La (LON)
AVS48_RS09835	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS09845	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AVS48_RS09940	SM00822	AVS48_RS09940
AVS48_RS10110	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVS48_RS10110	SM00465	GIY-YIG type nucleases (URI domain)
AVS48_RS10145	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS10165	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS10205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS10205	SM00895	AVS48_RS10205
AVS48_RS10225	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS10280	SM00411	bacterial (prokaryotic) histone like domain
AVS48_RS10285	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVS48_RS10430	SM00479	AVS48_RS10430
AVS48_RS10490	SM00841	Elongation factor P, C-terminal
AVS48_RS10490	SM01185	AVS48_RS10490
AVS48_RS10520	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS10535	SM00028	Tetratricopeptide repeats
AVS48_RS10565	SM00858	AVS48_RS10565
AVS48_RS10610	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVS48_RS10615	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS10635	SM00318	Staphylococcal nuclease homologues
AVS48_RS10655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS10700	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS10705	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS10710	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVS48_RS10725	SM00028	Tetratricopeptide repeats
AVS48_RS10750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AVS48_RS10780	SM00881	CoA binding domain
AVS48_RS10785	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS10800	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS10915	SM00478	endonuclease III
AVS48_RS10920	SM00840	AVS48_RS10920
AVS48_RS10925	SM00028	Tetratricopeptide repeats
AVS48_RS10945	SM01091	Transporter associated domain
AVS48_RS10965	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS11060	SM00912	haemagglutination activity domain
AVS48_RS11065	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS11065	SM00448	cheY-homologous receiver domain
AVS48_RS11070	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS11070	SM00073	Histidine Phosphotransfer domain
AVS48_RS11070	SM00091	PAS domain
AVS48_RS11070	SM00387	Histidine kinase-like ATPases
AVS48_RS11070	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS11070	SM00448	cheY-homologous receiver domain
AVS48_RS11075	SM00052	Putative diguanylate phosphodiesterase
AVS48_RS11120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS11120	SM00895	AVS48_RS11120
AVS48_RS11160	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AVS48_RS11170	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11180	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS11180	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AVS48_RS11185	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS11190	SM00248	ankyrin repeats
AVS48_RS11275	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11280	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11380	SM00822	AVS48_RS11380
AVS48_RS11395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AVS48_RS11500	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS11505	SM00869	Autotransporter beta-domain
AVS48_RS11510	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS11510	SM00448	cheY-homologous receiver domain
AVS48_RS11550	SM00028	Tetratricopeptide repeats
AVS48_RS11550	SM00327	von Willebrand factor (vWF) type A domain
AVS48_RS11555	SM00327	von Willebrand factor (vWF) type A domain
AVS48_RS11610	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11615	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11665	SM00984	UDP binding domain
AVS48_RS11690	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11735	SM00487	DEAD-like helicases superfamily
AVS48_RS11735	SM00490	helicase superfamily c-terminal domain
AVS48_RS11780	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11805	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11805	SM00448	cheY-homologous receiver domain
AVS48_RS11810	SM00091	PAS domain
AVS48_RS11810	SM00387	Histidine kinase-like ATPases
AVS48_RS11810	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS11815	SM01230	AVS48_RS11815
AVS48_RS11820	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVS48_RS11835	SM00052	Putative diguanylate phosphodiesterase
AVS48_RS11835	SM00267	diguanylate cyclase
AVS48_RS11840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVS48_RS11840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS11875	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS11890	SM00822	AVS48_RS11890
AVS48_RS11905	SM00072	Guanylate kinase homologues.
AVS48_RS11910	SM01409	AVS48_RS11910
AVS48_RS11915	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVS48_RS11915	SM00954	Region found in RelA / SpoT proteins
AVS48_RS11920	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS11930	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS11930	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AVS48_RS11950	SM01130	AVS48_RS11950
AVS48_RS11965	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AVS48_RS11970	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AVS48_RS11970	SM00534	ATPase domain of DNA mismatch repair MUTS family
AVS48_RS12050	SM00493	AVS48_RS12050
AVS48_RS12060	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS12150	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS12160	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS12160	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AVS48_RS12170	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS12175	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS12190	SM01001	AIR carboxylase
AVS48_RS12205	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS12235	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS12250	SM00834	Putative regulatory protein
AVS48_RS12270	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS12285	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS12335	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AVS48_RS12340	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS12340	SM00448	cheY-homologous receiver domain
AVS48_RS12360	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVS48_RS12360	SM00267	diguanylate cyclase
AVS48_RS12410	SM01006	Siderophore biosynthesis protein domain
AVS48_RS12430	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS12455	SM00267	diguanylate cyclase
AVS48_RS12485	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS12495	SM00843	AVS48_RS12495
AVS48_RS12505	SM00463	Small MutS-related domain
AVS48_RS12555	SM00448	cheY-homologous receiver domain
AVS48_RS12555	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS12575	SM01329	AVS48_RS12575
AVS48_RS12600	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS12625	SM00271	DnaJ molecular chaperone homology domain
AVS48_RS12775	SM00240	Forkhead associated domain
AVS48_RS12775	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS12785	SM00858	AVS48_RS12785
AVS48_RS12855	SM00881	CoA binding domain
AVS48_RS12885	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS12890	SM00448	cheY-homologous receiver domain
AVS48_RS12890	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS12895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS12895	SM00387	Histidine kinase-like ATPases
AVS48_RS12895	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS12910	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS12925	SM00822	AVS48_RS12925
AVS48_RS13035	SM00422	helix_turn_helix, mercury resistance
AVS48_RS13040	SM00411	bacterial (prokaryotic) histone like domain
AVS48_RS13045	SM00873	B3/4 domain
AVS48_RS13045	SM00874	tRNA synthetase B5 domain
AVS48_RS13045	SM00896	Ferredoxin-fold anticodon binding domain
AVS48_RS13085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS13145	SM00354	helix_turn _helix lactose operon repressor
AVS48_RS13150	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS13190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS13200	SM00829	Enoylreductase
AVS48_RS13220	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS13245	SM00849	Metallo-beta-lactamase superfamily
AVS48_RS13245	SM01027	Beta-Casp domain
AVS48_RS13290	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS13305	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS13330	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS13345	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVS48_RS13345	SM01240	AVS48_RS13345
AVS48_RS13355	SM00869	Autotransporter beta-domain
AVS48_RS13395	SM00344	helix_turn_helix ASNC type
AVS48_RS13430	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS13435	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS13440	SM00420	helix_turn_helix, Deoxyribose operon repressor
AVS48_RS13440	SM01134	AVS48_RS13440
AVS48_RS13450	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS13495	SM01130	AVS48_RS13495
AVS48_RS13500	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS13535	SM01007	Class II Aldolase and Adducin N-terminal domain
AVS48_RS13540	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS13545	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVS48_RS13560	SM00912	haemagglutination activity domain
AVS48_RS13565	SM01211	AVS48_RS13565
AVS48_RS13665	SM00479	AVS48_RS13665
AVS48_RS13725	SM00938	Nitrogen regulatory protein P-II
AVS48_RS13760	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVS48_RS13765	SM00852	Probable molybdopterin binding domain
AVS48_RS13770	SM00852	Probable molybdopterin binding domain
AVS48_RS13820	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVS48_RS13820	SM00876	Biotin and Thiamin Synthesis associated domain
AVS48_RS13845	SM00422	helix_turn_helix, mercury resistance
AVS48_RS13915	SM00938	Nitrogen regulatory protein P-II
AVS48_RS13925	SM00869	Autotransporter beta-domain
AVS48_RS13945	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS13950	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS13995	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS13995	SM01086	C-terminal, D2-small domain, of ClpB protein
AVS48_RS14005	SM01359	AVS48_RS14005
AVS48_RS14005	SM01360	AVS48_RS14005
AVS48_RS14015	SM00357	Cold shock protein domain
AVS48_RS14080	SM00822	AVS48_RS14080
AVS48_RS14165	SM00670	Large family of predicted nucleotide-binding domains
AVS48_RS14180	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS14215	SM00861	Transketolase, pyrimidine binding domain
AVS48_RS14230	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS14255	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVS48_RS14255	SM00924	MgtE intracellular N domain
AVS48_RS14310	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS14310	SM00930	AVS48_RS14310
AVS48_RS14365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS14365	SM00895	AVS48_RS14365
AVS48_RS14400	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS14430	SM00422	helix_turn_helix, mercury resistance
AVS48_RS14455	SM00822	AVS48_RS14455
AVS48_RS14540	SM00822	AVS48_RS14540
AVS48_RS14565	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVS48_RS14590	SM00829	Enoylreductase
AVS48_RS14605	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS14630	SM00344	helix_turn_helix ASNC type
AVS48_RS14675	SM00248	ankyrin repeats
AVS48_RS14700	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS14735	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS14750	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS14790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS14790	SM00895	AVS48_RS14790
AVS48_RS14860	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AVS48_RS14860	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AVS48_RS14880	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS14915	SM00912	haemagglutination activity domain
AVS48_RS14935	SM00528	Domain in histone-like proteins of HNS family
AVS48_RS14975	SM00257	Lysin motif
AVS48_RS15025	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AVS48_RS15050	SM00448	cheY-homologous receiver domain
AVS48_RS15055	SM00387	Histidine kinase-like ATPases
AVS48_RS15150	SM00363	S4 RNA-binding domain
AVS48_RS15180	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AVS48_RS15220	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS15240	SM00487	DEAD-like helicases superfamily
AVS48_RS15240	SM00490	helicase superfamily c-terminal domain
AVS48_RS15250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS15250	SM00895	AVS48_RS15250
AVS48_RS15285	SM00344	helix_turn_helix ASNC type
AVS48_RS15365	SM00878	Biotin carboxylase C-terminal domain
AVS48_RS15395	SM00955	AVS48_RS15395
AVS48_RS15425	SM00344	helix_turn_helix ASNC type
AVS48_RS15455	SM00957	SecA DEAD-like domain
AVS48_RS15455	SM00958	SecA preprotein cross-linking domain
AVS48_RS15475	SM00864	Tubulin/FtsZ family, GTPase domain
AVS48_RS15475	SM00865	Tubulin/FtsZ family, C-terminal domain
AVS48_RS15480	SM00842	Cell division protein FtsA
AVS48_RS15550	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS15565	SM00151	SWI complex, BAF60b domains
AVS48_RS15600	SM00344	helix_turn_helix ASNC type
AVS48_RS15700	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS15700	SM01086	C-terminal, D2-small domain, of ClpB protein
AVS48_RS15715	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AVS48_RS15730	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS15800	SM00996	S-adenosyl-L-homocysteine hydrolase
AVS48_RS15800	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AVS48_RS15855	SM00487	DEAD-like helicases superfamily
AVS48_RS15855	SM00490	helicase superfamily c-terminal domain
AVS48_RS15860	SM00986	Uracil DNA glycosylase superfamily
AVS48_RS15860	SM00987	UreE urease accessory protein, C-terminal domain 
AVS48_RS15875	SM00155	Phospholipase D. Active site motifs.
AVS48_RS15880	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS15925	SM00344	helix_turn_helix ASNC type
AVS48_RS15925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS15970	SM00422	helix_turn_helix, mercury resistance
AVS48_RS15970	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS16015	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS16025	SM00869	Autotransporter beta-domain
AVS48_RS16130	SM01400	AVS48_RS16130
AVS48_RS16150	SM00028	Tetratricopeptide repeats
AVS48_RS16155	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AVS48_RS16155	SM01232	AVS48_RS16155
AVS48_RS16160	SM00849	Metallo-beta-lactamase superfamily
AVS48_RS16195	SM00387	Histidine kinase-like ATPases
AVS48_RS16195	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS16200	SM00448	cheY-homologous receiver domain
AVS48_RS16200	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS16260	SM00984	UDP binding domain
AVS48_RS16290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS16345	SM00988	UreE urease accessory protein, N-terminal domain
AVS48_RS16375	SM00422	helix_turn_helix, mercury resistance
AVS48_RS16395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS16395	SM00866	AVS48_RS16395
AVS48_RS16475	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS16480	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS16490	SM00822	AVS48_RS16490
AVS48_RS16575	SM00849	Metallo-beta-lactamase superfamily
AVS48_RS16580	SM00257	Lysin motif
AVS48_RS16620	SM00448	cheY-homologous receiver domain
AVS48_RS16620	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS16625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS16625	SM00387	Histidine kinase-like ATPases
AVS48_RS16715	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS16750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS16750	SM00866	AVS48_RS16750
AVS48_RS16775	SM00903	Flavin reductase like domain
AVS48_RS16850	SM00925	MltA specific insert domain
AVS48_RS16880	SM00905	Dihydroneopterin aldolase
AVS48_RS16890	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVS48_RS16950	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS16970	SM00487	DEAD-like helicases superfamily
AVS48_RS16970	SM00490	helicase superfamily c-terminal domain
AVS48_RS16995	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS17110	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS17150	SM00155	Phospholipase D. Active site motifs.
AVS48_RS17170	SM00834	Putative regulatory protein
AVS48_RS17200	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVS48_RS17220	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS17275	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AVS48_RS17280	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AVS48_RS17310	SM00937	AVS48_RS17310
AVS48_RS17345	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS17355	SM00881	CoA binding domain
AVS48_RS17380	SM00344	helix_turn_helix ASNC type
AVS48_RS17410	SM00881	CoA binding domain
AVS48_RS17420	SM00829	Enoylreductase
AVS48_RS17495	SM01130	AVS48_RS17495
AVS48_RS17555	SM00881	CoA binding domain
AVS48_RS17560	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS17570	SM00861	Transketolase, pyrimidine binding domain
AVS48_RS17610	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS17615	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS17645	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS17670	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVS48_RS17670	SM00245	tail specific protease
AVS48_RS17680	SM00855	Phosphoglycerate mutase family
AVS48_RS17685	SM00450	Rhodanese Homology Domain
AVS48_RS17745	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS17765	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AVS48_RS17830	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVS48_RS17845	SM00448	cheY-homologous receiver domain
AVS48_RS17850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVS48_RS17850	SM00387	Histidine kinase-like ATPases
AVS48_RS17850	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS17925	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS17945	SM00344	helix_turn_helix ASNC type
AVS48_RS18000	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVS48_RS18020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS18020	SM00895	AVS48_RS18020
AVS48_RS18065	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS18085	SM00869	Autotransporter beta-domain
AVS48_RS18115	SM01119	AVS48_RS18115
AVS48_RS18125	SM00244	prohibitin homologues
AVS48_RS18220	SM00387	Histidine kinase-like ATPases
AVS48_RS18220	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS18255	SM01234	AVS48_RS18255
AVS48_RS18270	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS18270	SM00760	Bacterial dnaA protein helix-turn-helix domain
AVS48_RS18275	SM00480	DNA polymerase III beta subunit
AVS48_RS18280	SM00387	Histidine kinase-like ATPases
AVS48_RS18280	SM00433	TopoisomeraseII
AVS48_RS18285	SM00346	helix_turn_helix isocitrate lyase regulation
AVS48_RS18310	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS18310	SM00871	Bacterial transcription activator, effector binding domain
AVS48_RS18330	SM00422	helix_turn_helix, mercury resistance
AVS48_RS18335	SM00849	Metallo-beta-lactamase superfamily
AVS48_RS18365	SM00878	Biotin carboxylase C-terminal domain
AVS48_RS18365	SM01209	AVS48_RS18365
AVS48_RS18385	SM01119	AVS48_RS18385
AVS48_RS18420	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AVS48_RS18420	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AVS48_RS18420	SM00493	AVS48_RS18420
AVS48_RS18430	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS18460	SM00344	helix_turn_helix ASNC type
AVS48_RS18470	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
AVS48_RS18490	SM01018	B12 binding domain
AVS48_RS18570	SM00838	Elongation factor G C-terminus
AVS48_RS18570	SM00889	Elongation factor G, domain IV
AVS48_RS18580	SM01403	AVS48_RS18580
AVS48_RS18600	SM01382	AVS48_RS18600
AVS48_RS18600	SM01383	AVS48_RS18600
AVS48_RS18615	SM00322	K homology RNA-binding domain
AVS48_RS18650	SM01374	AVS48_RS18650
AVS48_RS18725	SM00363	S4 RNA-binding domain
AVS48_RS18725	SM01390	AVS48_RS18725
AVS48_RS18730	SM00662	RNA polymerases D
AVS48_RS18760	SM01004	Delta-aminolevulinic acid dehydratase
AVS48_RS18795	SM01219	AVS48_RS18795
AVS48_RS18815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVS48_RS18865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS18865	SM00866	AVS48_RS18865
AVS48_RS18910	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS18935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS18935	SM00895	AVS48_RS18935
AVS48_RS18965	SM01130	AVS48_RS18965
AVS48_RS18980	SM00257	Lysin motif
AVS48_RS19035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS19045	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS19050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVS48_RS19065	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS19080	SM00829	Enoylreductase
AVS48_RS19130	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS19180	SM00984	UDP binding domain
AVS48_RS19270	SM00100	Cyclic nucleotide-monophosphate binding domain
AVS48_RS19295	SM00829	Enoylreductase
AVS48_RS19325	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS19435	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS19525	SM00342	helix_turn_helix, arabinose operon control protein
AVS48_RS19640	SM00421	helix_turn_helix, Lux Regulon
AVS48_RS19680	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS19695	SM00062	Bacterial periplasmic substrate-binding proteins
AVS48_RS19700	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS19720	SM00478	endonuclease III
AVS48_RS19725	SM00530	Helix-turn-helix XRE-family like proteins 
AVS48_RS19800	SM01060	AVS48_RS19800
AVS48_RS19810	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS19830	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS19835	SM00382	ATPases associated with a variety of cellular activities
AVS48_RS19865	SM00448	cheY-homologous receiver domain
AVS48_RS19865	SM00862	Transcriptional regulatory protein, C terminal
AVS48_RS19870	SM00387	Histidine kinase-like ATPases
AVS48_RS19870	SM00388	His Kinase A (phosphoacceptor) domain
AVS48_RS19895	SM00357	Cold shock protein domain
