RD04_RS00005 SM01228 RD04_RS00005 RD04_RS00025 SM00470 ParB-like nuclease domain RD04_RS00030 SM00870 RD04_RS00030 RD04_RS00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RD04_RS00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RD04_RS00075 SM00649 Ribosomal protein L11/L12 RD04_RS00100 SM00663 RNA polymerase I subunit A N-terminus RD04_RS00130 SM00448 cheY-homologous receiver domain RD04_RS00130 SM00862 Transcriptional regulatory protein, C terminal RD04_RS00205 SM00563 Phosphate acyltransferases RD04_RS00245 SM00421 helix_turn_helix, Lux Regulon RD04_RS00290 SM00382 ATPases associated with a variety of cellular activities RD04_RS00305 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS00395 SM00387 Histidine kinase-like ATPases RD04_RS00405 SM00644 RD04_RS00405 RD04_RS00420 SM00382 ATPases associated with a variety of cellular activities RD04_RS00420 SM00962 SRP54-type protein, GTPase domain RD04_RS00420 SM00963 SRP54-type protein, helical bundle domain RD04_RS00520 SM00382 ATPases associated with a variety of cellular activities RD04_RS00545 SM00936 Penicillin-binding protein 5, C-terminal domain RD04_RS00565 SM00729 Elongator protein 3, MiaB family, Radical SAM RD04_RS00610 SM00836 DALR anticodon binding domain RD04_RS00610 SM01016 Arginyl tRNA synthetase N terminal dom RD04_RS00645 SM00382 ATPases associated with a variety of cellular activities RD04_RS00660 SM00382 ATPases associated with a variety of cellular activities RD04_RS00695 SM00917 LeuA allosteric (dimerisation) domain RD04_RS00750 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS00750 SM00895 RD04_RS00750 RD04_RS00785 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS00795 SM00797 Allophanate hydrolase subunit 2 RD04_RS00800 SM00796 Allophanate hydrolase subunit 1 RD04_RS00825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS00825 SM00387 Histidine kinase-like ATPases RD04_RS00825 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS00830 SM00448 cheY-homologous receiver domain RD04_RS00830 SM00862 Transcriptional regulatory protein, C terminal RD04_RS00835 SM00091 PAS domain RD04_RS00835 SM00387 Histidine kinase-like ATPases RD04_RS00835 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS00840 SM00448 cheY-homologous receiver domain RD04_RS00840 SM00862 Transcriptional regulatory protein, C terminal RD04_RS00850 SM00978 RD04_RS00850 RD04_RS00875 SM00382 ATPases associated with a variety of cellular activities RD04_RS00890 SM00487 DEAD-like helicases superfamily RD04_RS00890 SM00490 helicase superfamily c-terminal domain RD04_RS00935 SM00450 Rhodanese Homology Domain RD04_RS01005 SM00938 Nitrogen regulatory protein P-II RD04_RS01080 SM00382 ATPases associated with a variety of cellular activities RD04_RS01130 SM00878 Biotin carboxylase C-terminal domain RD04_RS01135 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS01135 SM00866 RD04_RS01135 RD04_RS01210 SM00382 ATPases associated with a variety of cellular activities RD04_RS01250 SM01387 RD04_RS01250 RD04_RS01255 SM00316 Ribosomal protein S1-like RNA-binding domain RD04_RS01255 SM00322 K homology RNA-binding domain RD04_RS01285 SM00829 Enoylreductase RD04_RS01310 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS01375 SM00450 Rhodanese Homology Domain RD04_RS01400 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS01460 SM00014 Acid phosphatase homologues RD04_RS01515 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD04_RS01520 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD04_RS01605 SM00487 DEAD-like helicases superfamily RD04_RS01605 SM00490 helicase superfamily c-terminal domain RD04_RS01605 SM00982 RD04_RS01605 RD04_RS01605 SM01058 CarD-like/TRCF domain RD04_RS01665 SM00382 ATPases associated with a variety of cellular activities RD04_RS01685 SM00829 Enoylreductase RD04_RS01690 SM00895 RD04_RS01690 RD04_RS01695 SM00869 Autotransporter beta-domain RD04_RS01700 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS01700 SM00895 RD04_RS01700 RD04_RS01730 SM00382 ATPases associated with a variety of cellular activities RD04_RS01745 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS01765 SM00382 ATPases associated with a variety of cellular activities RD04_RS01845 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RD04_RS01850 SM00862 Transcriptional regulatory protein, C terminal RD04_RS01855 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS01890 SM00965 Secretin and TonB N terminus short domain RD04_RS01895 SM00867 YceI-like domain RD04_RS01930 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS01950 SM00382 ATPases associated with a variety of cellular activities RD04_RS02015 SM00650 Ribosomal RNA adenine dimethylases RD04_RS02060 SM00382 ATPases associated with a variety of cellular activities RD04_RS02115 SM00448 cheY-homologous receiver domain RD04_RS02115 SM00862 Transcriptional regulatory protein, C terminal RD04_RS02350 SM00382 ATPases associated with a variety of cellular activities RD04_RS02355 SM00382 ATPases associated with a variety of cellular activities RD04_RS02380 SM00947 Carbonic anhydrase RD04_RS02395 SM00341 Helicase and RNase D C-terminal RD04_RS02395 SM00487 DEAD-like helicases superfamily RD04_RS02395 SM00490 helicase superfamily c-terminal domain RD04_RS02395 SM00956 RD04_RS02395 RD04_RS02400 SM00382 ATPases associated with a variety of cellular activities RD04_RS02415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD04_RS02425 SM00798 AICARFT/IMPCHase bienzyme RD04_RS02425 SM00851 MGS-like domain RD04_RS02450 SM01011 Aminopeptidase P, N-terminal domain RD04_RS02525 SM00487 DEAD-like helicases superfamily RD04_RS02525 SM00490 helicase superfamily c-terminal domain RD04_RS02545 SM00852 Probable molybdopterin binding domain RD04_RS02550 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS02630 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS02630 SM00895 RD04_RS02630 RD04_RS02650 SM00919 Malic enzyme, NAD binding domain RD04_RS02650 SM01274 RD04_RS02650 RD04_RS02670 SM00382 ATPases associated with a variety of cellular activities RD04_RS02700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD04_RS02735 SM00382 ATPases associated with a variety of cellular activities RD04_RS02735 SM00962 SRP54-type protein, GTPase domain RD04_RS02735 SM00963 SRP54-type protein, helical bundle domain RD04_RS02740 SM00880 RD04_RS02740 RD04_RS02780 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS02820 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RD04_RS02840 SM00869 Autotransporter beta-domain RD04_RS02850 SM00883 Chaperonin 10 Kd subunit RD04_RS02900 SM00267 diguanylate cyclase RD04_RS02905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD04_RS02950 SM00155 Phospholipase D. Active site motifs. RD04_RS02985 SM01144 RD04_RS02985 RD04_RS02995 SM00316 Ribosomal protein S1-like RNA-binding domain RD04_RS02995 SM00357 Cold shock protein domain RD04_RS02995 SM00955 RD04_RS02995 RD04_RS03000 SM00967 RNA 2'-O ribose methyltransferase substrate binding RD04_RS03010 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RD04_RS03015 SM00411 bacterial (prokaryotic) histone like domain RD04_RS03040 SM00448 cheY-homologous receiver domain RD04_RS03040 SM00862 Transcriptional regulatory protein, C terminal RD04_RS03045 SM00387 Histidine kinase-like ATPases RD04_RS03045 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS03100 SM01130 RD04_RS03100 RD04_RS03105 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS03105 SM00895 RD04_RS03105 RD04_RS03120 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS03135 SM00387 Histidine kinase-like ATPases RD04_RS03135 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS03145 SM00448 cheY-homologous receiver domain RD04_RS03145 SM00862 Transcriptional regulatory protein, C terminal RD04_RS03155 SM00986 Uracil DNA glycosylase superfamily RD04_RS03155 SM00987 UreE urease accessory protein, C-terminal domain RD04_RS03165 SM00968 SMC proteins Flexible Hinge Domain RD04_RS03170 SM00771 ZipA, C-terminal domain (FtsZ-binding) RD04_RS03175 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD04_RS03175 SM00292 breast cancer carboxy-terminal domain RD04_RS03175 SM00532 Ligase N family RD04_RS03200 SM00382 ATPases associated with a variety of cellular activities RD04_RS03225 SM00382 ATPases associated with a variety of cellular activities RD04_RS03255 SM00382 ATPases associated with a variety of cellular activities RD04_RS03260 SM00382 ATPases associated with a variety of cellular activities RD04_RS03265 SM00478 endonuclease III RD04_RS03265 SM00525 RD04_RS03265 RD04_RS03310 SM00954 Region found in RelA / SpoT proteins RD04_RS03350 SM00316 Ribosomal protein S1-like RNA-binding domain RD04_RS03355 SM00363 S4 RNA-binding domain RD04_RS03430 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD04_RS03445 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS03445 SM00895 RD04_RS03445 RD04_RS03455 SM00357 Cold shock protein domain RD04_RS03525 SM00838 Elongation factor G C-terminus RD04_RS03525 SM00889 Elongation factor G, domain IV RD04_RS03530 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS03560 SM00479 RD04_RS03560 RD04_RS03655 SM00450 Rhodanese Homology Domain RD04_RS03695 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS03700 SM00450 Rhodanese Homology Domain RD04_RS03765 SM00749 bacterial OsmY and nodulation domain RD04_RS03840 SM00845 GatB domain RD04_RS03855 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD04_RS03880 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS03900 SM01236 RD04_RS03900 RD04_RS03915 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS03915 SM00895 RD04_RS03915 RD04_RS03960 SM00965 Secretin and TonB N terminus short domain RD04_RS03980 SM00382 ATPases associated with a variety of cellular activities RD04_RS04005 SM00267 diguanylate cyclase RD04_RS04035 SM00849 Metallo-beta-lactamase superfamily RD04_RS04085 SM00563 Phosphate acyltransferases RD04_RS04100 SM00732 Likely ribonuclease with RNase H fold. RD04_RS04170 SM00382 ATPases associated with a variety of cellular activities RD04_RS04175 SM00382 ATPases associated with a variety of cellular activities RD04_RS04200 SM00347 helix_turn_helix multiple antibiotic resistance protein RD04_RS04250 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS04260 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS04290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD04_RS04380 SM00382 ATPases associated with a variety of cellular activities RD04_RS04385 SM00382 ATPases associated with a variety of cellular activities RD04_RS04465 SM00646 RD04_RS04465 RD04_RS04475 SM00853 MutL C terminal dimerisation domain RD04_RS04475 SM01340 RD04_RS04475 RD04_RS04490 SM00382 ATPases associated with a variety of cellular activities RD04_RS04530 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS04530 SM00895 RD04_RS04530 RD04_RS04595 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS04595 SM00895 RD04_RS04595 RD04_RS04625 SM00869 Autotransporter beta-domain RD04_RS04645 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS04650 SM00882 Coenzyme A transferase RD04_RS04655 SM00882 Coenzyme A transferase RD04_RS04705 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS04705 SM00895 RD04_RS04705 RD04_RS04795 SM00479 RD04_RS04795 RD04_RS04890 SM01211 RD04_RS04890 RD04_RS04910 SM00347 helix_turn_helix multiple antibiotic resistance protein RD04_RS04915 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS04920 SM01007 Class II Aldolase and Adducin N-terminal domain RD04_RS04960 SM01130 RD04_RS04960 RD04_RS05005 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS05015 SM00420 helix_turn_helix, Deoxyribose operon repressor RD04_RS05015 SM01134 RD04_RS05015 RD04_RS05020 SM00382 ATPases associated with a variety of cellular activities RD04_RS05025 SM00382 ATPases associated with a variety of cellular activities RD04_RS05060 SM00344 helix_turn_helix ASNC type RD04_RS05095 SM00421 helix_turn_helix, Lux Regulon RD04_RS05105 SM00869 Autotransporter beta-domain RD04_RS05115 SM00116 Domain in cystathionine beta-synthase and other proteins. RD04_RS05115 SM01240 RD04_RS05115 RD04_RS05125 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS05150 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS05165 SM00382 ATPases associated with a variety of cellular activities RD04_RS05195 SM00849 Metallo-beta-lactamase superfamily RD04_RS05195 SM01027 Beta-Casp domain RD04_RS05215 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS05235 SM00829 Enoylreductase RD04_RS05245 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS05290 SM00382 ATPases associated with a variety of cellular activities RD04_RS05295 SM00354 helix_turn _helix lactose operon repressor RD04_RS05345 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS05380 SM00873 B3/4 domain RD04_RS05380 SM00874 tRNA synthetase B5 domain RD04_RS05380 SM00896 Ferredoxin-fold anticodon binding domain RD04_RS05385 SM00411 bacterial (prokaryotic) histone like domain RD04_RS05390 SM00422 helix_turn_helix, mercury resistance RD04_RS05495 SM00822 RD04_RS05495 RD04_RS05510 SM00382 ATPases associated with a variety of cellular activities RD04_RS05525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS05525 SM00387 Histidine kinase-like ATPases RD04_RS05525 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS05530 SM00448 cheY-homologous receiver domain RD04_RS05530 SM00862 Transcriptional regulatory protein, C terminal RD04_RS05535 SM00382 ATPases associated with a variety of cellular activities RD04_RS05565 SM00881 CoA binding domain RD04_RS05635 SM00858 RD04_RS05635 RD04_RS05645 SM00240 Forkhead associated domain RD04_RS05645 SM00382 ATPases associated with a variety of cellular activities RD04_RS05795 SM00271 DnaJ molecular chaperone homology domain RD04_RS05820 SM00382 ATPases associated with a variety of cellular activities RD04_RS05845 SM01329 RD04_RS05845 RD04_RS05865 SM00448 cheY-homologous receiver domain RD04_RS05865 SM00862 Transcriptional regulatory protein, C terminal RD04_RS05870 SM00387 Histidine kinase-like ATPases RD04_RS05870 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS05920 SM00843 RD04_RS05920 RD04_RS05930 SM00382 ATPases associated with a variety of cellular activities RD04_RS05960 SM00267 diguanylate cyclase RD04_RS05985 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS06005 SM01006 Siderophore biosynthesis protein domain RD04_RS06055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RD04_RS06055 SM00267 diguanylate cyclase RD04_RS06075 SM00421 helix_turn_helix, Lux Regulon RD04_RS06075 SM00448 cheY-homologous receiver domain RD04_RS06080 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD04_RS06125 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS06140 SM00382 ATPases associated with a variety of cellular activities RD04_RS06160 SM00834 Putative regulatory protein RD04_RS06175 SM00421 helix_turn_helix, Lux Regulon RD04_RS06205 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS06215 SM01001 AIR carboxylase RD04_RS06230 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS06235 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS06245 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS06245 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD04_RS06255 SM00382 ATPases associated with a variety of cellular activities RD04_RS06340 SM00382 ATPases associated with a variety of cellular activities RD04_RS06350 SM00493 RD04_RS06350 RD04_RS06420 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RD04_RS06420 SM00534 ATPase domain of DNA mismatch repair MUTS family RD04_RS06425 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RD04_RS06445 SM01130 RD04_RS06445 RD04_RS06460 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS06460 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD04_RS06470 SM00382 ATPases associated with a variety of cellular activities RD04_RS06475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD04_RS06475 SM00954 Region found in RelA / SpoT proteins RD04_RS06480 SM01409 RD04_RS06480 RD04_RS06485 SM00072 Guanylate kinase homologues. RD04_RS06500 SM00822 RD04_RS06500 RD04_RS06515 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS06550 SM00052 Putative diguanylate phosphodiesterase RD04_RS06550 SM00267 diguanylate cyclase RD04_RS06565 SM00729 Elongator protein 3, MiaB family, Radical SAM RD04_RS06570 SM01230 RD04_RS06570 RD04_RS06575 SM00091 PAS domain RD04_RS06575 SM00387 Histidine kinase-like ATPases RD04_RS06575 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS06580 SM00382 ATPases associated with a variety of cellular activities RD04_RS06580 SM00448 cheY-homologous receiver domain RD04_RS06605 SM00382 ATPases associated with a variety of cellular activities RD04_RS06650 SM00487 DEAD-like helicases superfamily RD04_RS06650 SM00490 helicase superfamily c-terminal domain RD04_RS06695 SM00382 ATPases associated with a variety of cellular activities RD04_RS06720 SM00984 UDP binding domain RD04_RS06770 SM00382 ATPases associated with a variety of cellular activities RD04_RS06775 SM00382 ATPases associated with a variety of cellular activities RD04_RS06825 SM00327 von Willebrand factor (vWF) type A domain RD04_RS06830 SM00028 Tetratricopeptide repeats RD04_RS06830 SM00327 von Willebrand factor (vWF) type A domain RD04_RS06870 SM00421 helix_turn_helix, Lux Regulon RD04_RS06870 SM00448 cheY-homologous receiver domain RD04_RS06875 SM00869 Autotransporter beta-domain RD04_RS06880 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS06985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD04_RS07000 SM00822 RD04_RS07000 RD04_RS07100 SM00382 ATPases associated with a variety of cellular activities RD04_RS07105 SM00382 ATPases associated with a variety of cellular activities RD04_RS07160 SM01207 RD04_RS07160 RD04_RS07175 SM00257 Lysin motif RD04_RS07200 SM00422 helix_turn_helix, mercury resistance RD04_RS07250 SM00749 bacterial OsmY and nodulation domain RD04_RS07310 SM00344 helix_turn_helix ASNC type RD04_RS07335 SM00904 Riboflavin kinase RD04_RS07365 SM00965 Secretin and TonB N terminus short domain RD04_RS07370 SM00382 ATPases associated with a variety of cellular activities RD04_RS07405 SM00869 Autotransporter beta-domain RD04_RS07420 SM00357 Cold shock protein domain RD04_RS07430 SM00357 Cold shock protein domain RD04_RS07450 SM00382 ATPases associated with a variety of cellular activities RD04_RS07450 SM00994 ClpX C4-type zinc finger RD04_RS07450 SM01086 C-terminal, D2-small domain, of ClpB protein RD04_RS07455 SM00382 ATPases associated with a variety of cellular activities RD04_RS07455 SM00464 Found in ATP-dependent protease La (LON) RD04_RS07510 SM00882 Coenzyme A transferase RD04_RS07515 SM00882 Coenzyme A transferase RD04_RS07540 SM00869 Autotransporter beta-domain RD04_RS07555 SM00487 DEAD-like helicases superfamily RD04_RS07555 SM00490 helicase superfamily c-terminal domain RD04_RS07560 SM00226 Low molecular weight phosphatase family RD04_RS07585 SM00271 DnaJ molecular chaperone homology domain RD04_RS07645 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS07645 SM00866 RD04_RS07645 RD04_RS07705 SM00382 ATPases associated with a variety of cellular activities RD04_RS07755 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD04_RS07800 SM00387 Histidine kinase-like ATPases RD04_RS07800 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS07805 SM00448 cheY-homologous receiver domain RD04_RS07820 SM00562 RD04_RS07820 RD04_RS07850 SM00564 beta-propeller repeat RD04_RS07855 SM00382 ATPases associated with a variety of cellular activities RD04_RS07875 SM00244 prohibitin homologues RD04_RS07880 SM00244 prohibitin homologues RD04_RS07890 SM00788 Adenylosuccinate synthetase RD04_RS07905 SM00400 zinc finger RD04_RS07905 SM00493 RD04_RS07905 RD04_RS07905 SM00766 DNA primase DnaG DnaB-binding RD04_RS07945 SM00382 ATPases associated with a variety of cellular activities RD04_RS08045 SM00382 ATPases associated with a variety of cellular activities RD04_RS08085 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS08105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD04_RS08120 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS08120 SM00895 RD04_RS08120 RD04_RS08140 SM00382 ATPases associated with a variety of cellular activities RD04_RS08175 SM00464 Found in ATP-dependent protease La (LON) RD04_RS08185 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS08195 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD04_RS08285 SM00822 RD04_RS08285 RD04_RS08450 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD04_RS08450 SM00465 GIY-YIG type nucleases (URI domain) RD04_RS08485 SM00862 Transcriptional regulatory protein, C terminal RD04_RS08505 SM00382 ATPases associated with a variety of cellular activities RD04_RS08545 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS08545 SM00895 RD04_RS08545 RD04_RS08565 SM00382 ATPases associated with a variety of cellular activities RD04_RS08615 SM00411 bacterial (prokaryotic) histone like domain RD04_RS08620 SM00347 helix_turn_helix multiple antibiotic resistance protein RD04_RS08760 SM00479 RD04_RS08760 RD04_RS08820 SM00841 Elongation factor P, C-terminal RD04_RS08820 SM01185 RD04_RS08820 RD04_RS08850 SM00382 ATPases associated with a variety of cellular activities RD04_RS08865 SM00028 Tetratricopeptide repeats RD04_RS08895 SM00858 RD04_RS08895 RD04_RS08940 SM00347 helix_turn_helix multiple antibiotic resistance protein RD04_RS08945 SM00382 ATPases associated with a variety of cellular activities RD04_RS08965 SM00318 Staphylococcal nuclease homologues RD04_RS08985 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS09030 SM00421 helix_turn_helix, Lux Regulon RD04_RS09105 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD04_RS09110 SM00382 ATPases associated with a variety of cellular activities RD04_RS09115 SM00382 ATPases associated with a variety of cellular activities RD04_RS09135 SM00347 helix_turn_helix multiple antibiotic resistance protein RD04_RS09150 SM00028 Tetratricopeptide repeats RD04_RS09175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD04_RS09205 SM00881 CoA binding domain RD04_RS09210 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS09225 SM00382 ATPases associated with a variety of cellular activities RD04_RS09340 SM00478 endonuclease III RD04_RS09345 SM00840 RD04_RS09345 RD04_RS09350 SM00028 Tetratricopeptide repeats RD04_RS09370 SM01091 Transporter associated domain RD04_RS09390 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS09485 SM00912 haemagglutination activity domain RD04_RS09490 SM00421 helix_turn_helix, Lux Regulon RD04_RS09490 SM00448 cheY-homologous receiver domain RD04_RS09495 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS09495 SM00073 Histidine Phosphotransfer domain RD04_RS09495 SM00091 PAS domain RD04_RS09495 SM00387 Histidine kinase-like ATPases RD04_RS09495 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS09495 SM00448 cheY-homologous receiver domain RD04_RS09500 SM00052 Putative diguanylate phosphodiesterase RD04_RS09540 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS09540 SM00895 RD04_RS09540 RD04_RS09580 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD04_RS09590 SM00382 ATPases associated with a variety of cellular activities RD04_RS09600 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS09600 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD04_RS09605 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS09610 SM00248 ankyrin repeats RD04_RS09615 SM00248 ankyrin repeats RD04_RS09685 SM00347 helix_turn_helix multiple antibiotic resistance protein RD04_RS09720 SM00869 Autotransporter beta-domain RD04_RS09730 SM00155 Phospholipase D. Active site motifs. RD04_RS09745 SM01005 Alanine racemase, C-terminal domain RD04_RS09755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS09755 SM00331 Sigma factor PP2C-like phosphatases RD04_RS09755 SM01049 RD04_RS09755 RD04_RS09830 SM00382 ATPases associated with a variety of cellular activities RD04_RS09945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD04_RS09945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS09990 SM00382 ATPases associated with a variety of cellular activities RD04_RS10005 SM00450 Rhodanese Homology Domain RD04_RS10020 SM00829 Enoylreductase RD04_RS10035 SM00347 helix_turn_helix multiple antibiotic resistance protein RD04_RS10055 SM01329 RD04_RS10055 RD04_RS10060 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS10080 SM00382 ATPases associated with a variety of cellular activities RD04_RS10145 SM01209 RD04_RS10145 RD04_RS10145 SM01210 RD04_RS10145 RD04_RS10175 SM00869 Autotransporter beta-domain RD04_RS10215 SM00316 Ribosomal protein S1-like RNA-binding domain RD04_RS10235 SM00382 ATPases associated with a variety of cellular activities RD04_RS10290 SM00481 DNA polymerase alpha chain like domain RD04_RS10300 SM00382 ATPases associated with a variety of cellular activities RD04_RS10300 SM00487 DEAD-like helicases superfamily RD04_RS10300 SM00490 helicase superfamily c-terminal domain RD04_RS10300 SM00847 Helicase associated domain (HA2) Add an annotation RD04_RS10365 SM00382 ATPases associated with a variety of cellular activities RD04_RS10450 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS10450 SM00866 RD04_RS10450 RD04_RS10490 SM00981 RD04_RS10490 RD04_RS10545 SM00028 Tetratricopeptide repeats RD04_RS10545 SM00862 Transcriptional regulatory protein, C terminal RD04_RS10555 SM01192 RD04_RS10555 RD04_RS10555 SM01193 RD04_RS10555 RD04_RS10610 SM00382 ATPases associated with a variety of cellular activities RD04_RS10625 SM00882 Coenzyme A transferase RD04_RS10780 SM00358 Double-stranded RNA binding motif RD04_RS10780 SM00535 Ribonuclease III family RD04_RS10790 SM00838 Elongation factor G C-terminus RD04_RS10795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD04_RS10820 SM00825 Beta-ketoacyl synthase RD04_RS10830 SM00822 RD04_RS10830 RD04_RS10835 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RD04_RS10870 SM00644 RD04_RS10870 RD04_RS10930 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD04_RS10935 SM01329 RD04_RS10935 RD04_RS10955 SM00382 ATPases associated with a variety of cellular activities RD04_RS10990 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD04_RS11030 SM00852 Probable molybdopterin binding domain RD04_RS11050 SM00052 Putative diguanylate phosphodiesterase RD04_RS11070 SM00382 ATPases associated with a variety of cellular activities RD04_RS11080 SM00855 Phosphoglycerate mutase family RD04_RS11090 SM00851 MGS-like domain RD04_RS11090 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD04_RS11095 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RD04_RS11155 SM00267 diguanylate cyclase RD04_RS11160 SM00244 prohibitin homologues RD04_RS11220 SM00935 Outer membrane protein (OmpH-like) RD04_RS11230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD04_RS11275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD04_RS11370 SM00382 ATPases associated with a variety of cellular activities RD04_RS11435 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD04_RS11435 SM00091 PAS domain RD04_RS11435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD04_RS11435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS11440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD04_RS11440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS11445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD04_RS11445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS11460 SM00047 Lysozyme subfamily 2 RD04_RS11505 SM00858 RD04_RS11505 RD04_RS11520 SM00382 ATPases associated with a variety of cellular activities RD04_RS11520 SM00962 SRP54-type protein, GTPase domain RD04_RS11540 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS11550 SM00382 ATPases associated with a variety of cellular activities RD04_RS11565 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD04_RS11585 SM00354 helix_turn _helix lactose operon repressor RD04_RS11610 SM00881 CoA binding domain RD04_RS11615 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS11615 SM00895 RD04_RS11615 RD04_RS11640 SM00869 Autotransporter beta-domain RD04_RS11660 SM00155 Phospholipase D. Active site motifs. RD04_RS11705 SM00642 Alpha-amylase domain RD04_RS11710 SM00642 Alpha-amylase domain RD04_RS11715 SM00642 Alpha-amylase domain RD04_RS11720 SM00642 Alpha-amylase domain RD04_RS11725 SM00642 Alpha-amylase domain RD04_RS11740 SM00642 Alpha-amylase domain RD04_RS11760 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS11895 SM00953 RD04_RS11895 RD04_RS11930 SM00382 ATPases associated with a variety of cellular activities RD04_RS11980 SM00382 ATPases associated with a variety of cellular activities RD04_RS11985 SM00382 ATPases associated with a variety of cellular activities RD04_RS12020 SM00434 DNA Topoisomerase IV RD04_RS12030 SM00387 Histidine kinase-like ATPases RD04_RS12030 SM00433 TopoisomeraseII RD04_RS12040 SM00357 Cold shock protein domain RD04_RS12040 SM00382 ATPases associated with a variety of cellular activities RD04_RS12040 SM00959 Rho termination factor, N-terminal domain RD04_RS12080 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RD04_RS12080 SM00474 3'-5' exonuclease RD04_RS12080 SM00475 5'-3' exonuclease RD04_RS12080 SM00482 DNA polymerase A domain RD04_RS12120 SM00316 Ribosomal protein S1-like RNA-binding domain RD04_RS12130 SM00363 S4 RNA-binding domain RD04_RS12155 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD04_RS12230 SM00382 ATPases associated with a variety of cellular activities RD04_RS12235 SM00327 von Willebrand factor (vWF) type A domain RD04_RS12260 SM01005 Alanine racemase, C-terminal domain RD04_RS12295 SM00382 ATPases associated with a variety of cellular activities RD04_RS12360 SM00869 Autotransporter beta-domain RD04_RS12365 SM00869 Autotransporter beta-domain RD04_RS12375 SM00382 ATPases associated with a variety of cellular activities RD04_RS12375 SM01086 C-terminal, D2-small domain, of ClpB protein RD04_RS12380 SM00100 Cyclic nucleotide-monophosphate binding domain RD04_RS12380 SM00419 helix_turn_helix, cAMP Regulatory protein RD04_RS12450 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS12465 SM00382 ATPases associated with a variety of cellular activities RD04_RS12515 SM00822 RD04_RS12515 RD04_RS12530 SM00363 S4 RNA-binding domain RD04_RS12540 SM00491 RD04_RS12540 RD04_RS12545 SM00316 Ribosomal protein S1-like RNA-binding domain RD04_RS12545 SM00732 Likely ribonuclease with RNase H fold. RD04_RS12615 SM00861 Transketolase, pyrimidine binding domain RD04_RS12635 SM00344 helix_turn_helix ASNC type RD04_RS12645 SM00919 Malic enzyme, NAD binding domain RD04_RS12645 SM01274 RD04_RS12645 RD04_RS12665 SM00481 DNA polymerase alpha chain like domain RD04_RS12695 SM00869 Autotransporter beta-domain RD04_RS12705 SM00382 ATPases associated with a variety of cellular activities RD04_RS12725 SM00937 RD04_RS12725 RD04_RS12730 SM00822 RD04_RS12730 RD04_RS12755 SM00382 ATPases associated with a variety of cellular activities RD04_RS12775 SM00382 ATPases associated with a variety of cellular activities RD04_RS12785 SM00052 Putative diguanylate phosphodiesterase RD04_RS12785 SM00267 diguanylate cyclase RD04_RS12785 SM00387 Histidine kinase-like ATPases RD04_RS12785 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS12790 SM00448 cheY-homologous receiver domain RD04_RS12790 SM00862 Transcriptional regulatory protein, C terminal RD04_RS12810 SM00116 Domain in cystathionine beta-synthase and other proteins. RD04_RS12845 SM01103 RD04_RS12845 RD04_RS12855 SM00382 ATPases associated with a variety of cellular activities RD04_RS12900 SM00382 ATPases associated with a variety of cellular activities RD04_RS12930 SM00919 Malic enzyme, NAD binding domain RD04_RS12930 SM01274 RD04_RS12930 RD04_RS12980 SM00869 Autotransporter beta-domain RD04_RS13010 SM01323 RD04_RS13010 RD04_RS13035 SM00729 Elongator protein 3, MiaB family, Radical SAM RD04_RS13050 SM01091 Transporter associated domain RD04_RS13090 SM00448 cheY-homologous receiver domain RD04_RS13095 SM00448 cheY-homologous receiver domain RD04_RS13100 SM00138 Methyltransferase, chemotaxis proteins RD04_RS13115 SM00138 Methyltransferase, chemotaxis proteins RD04_RS13120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD04_RS13120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS13125 SM00260 Two component signalling adaptor domain RD04_RS13130 SM00073 Histidine Phosphotransfer domain RD04_RS13130 SM00260 Two component signalling adaptor domain RD04_RS13130 SM00387 Histidine kinase-like ATPases RD04_RS13130 SM01231 RD04_RS13130 RD04_RS13135 SM00448 cheY-homologous receiver domain RD04_RS13170 SM00316 Ribosomal protein S1-like RNA-binding domain RD04_RS13190 SM00852 Probable molybdopterin binding domain RD04_RS13210 SM00271 DnaJ molecular chaperone homology domain RD04_RS13260 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD04_RS13265 SM00861 Transketolase, pyrimidine binding domain RD04_RS13305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD04_RS13305 SM00091 PAS domain RD04_RS13305 SM00387 Histidine kinase-like ATPases RD04_RS13305 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS13310 SM00421 helix_turn_helix, Lux Regulon RD04_RS13310 SM00448 cheY-homologous receiver domain RD04_RS13355 SM00363 S4 RNA-binding domain RD04_RS13400 SM00729 Elongator protein 3, MiaB family, Radical SAM RD04_RS13420 SM00382 ATPases associated with a variety of cellular activities RD04_RS13455 SM00893 Electron transfer flavoprotein domain RD04_RS13460 SM00893 Electron transfer flavoprotein domain RD04_RS13510 SM00411 bacterial (prokaryotic) histone like domain RD04_RS13515 SM00316 Ribosomal protein S1-like RNA-binding domain RD04_RS13535 SM00830 Chorismate mutase type II RD04_RS13545 SM00434 DNA Topoisomerase IV RD04_RS13610 SM00729 Elongator protein 3, MiaB family, Radical SAM RD04_RS13615 SM00852 Probable molybdopterin binding domain RD04_RS13620 SM00852 Probable molybdopterin binding domain RD04_RS13670 SM00729 Elongator protein 3, MiaB family, Radical SAM RD04_RS13670 SM00876 Biotin and Thiamin Synthesis associated domain RD04_RS13695 SM00422 helix_turn_helix, mercury resistance RD04_RS13760 SM00938 Nitrogen regulatory protein P-II RD04_RS13770 SM00869 Autotransporter beta-domain RD04_RS13790 SM00382 ATPases associated with a variety of cellular activities RD04_RS13795 SM00382 ATPases associated with a variety of cellular activities RD04_RS13840 SM00382 ATPases associated with a variety of cellular activities RD04_RS13840 SM01086 C-terminal, D2-small domain, of ClpB protein RD04_RS13850 SM01359 RD04_RS13850 RD04_RS13850 SM01360 RD04_RS13850 RD04_RS13860 SM00357 Cold shock protein domain RD04_RS13925 SM00822 RD04_RS13925 RD04_RS14015 SM00382 ATPases associated with a variety of cellular activities RD04_RS14050 SM00861 Transketolase, pyrimidine binding domain RD04_RS14065 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS14090 SM00116 Domain in cystathionine beta-synthase and other proteins. RD04_RS14090 SM00924 MgtE intracellular N domain RD04_RS14140 SM00382 ATPases associated with a variety of cellular activities RD04_RS14140 SM00930 RD04_RS14140 RD04_RS14190 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS14190 SM00895 RD04_RS14190 RD04_RS14225 SM00382 ATPases associated with a variety of cellular activities RD04_RS14255 SM00422 helix_turn_helix, mercury resistance RD04_RS14280 SM00822 RD04_RS14280 RD04_RS14345 SM00822 RD04_RS14345 RD04_RS14370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD04_RS14395 SM00829 Enoylreductase RD04_RS14410 SM00382 ATPases associated with a variety of cellular activities RD04_RS14435 SM00344 helix_turn_helix ASNC type RD04_RS14480 SM00248 ankyrin repeats RD04_RS14505 SM00382 ATPases associated with a variety of cellular activities RD04_RS14540 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS14555 SM00382 ATPases associated with a variety of cellular activities RD04_RS14595 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS14595 SM00895 RD04_RS14595 RD04_RS14665 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RD04_RS14665 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RD04_RS14675 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS14710 SM00912 haemagglutination activity domain RD04_RS14730 SM00528 Domain in histone-like proteins of HNS family RD04_RS14770 SM00257 Lysin motif RD04_RS14820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD04_RS14845 SM00448 cheY-homologous receiver domain RD04_RS14850 SM00387 Histidine kinase-like ATPases RD04_RS14905 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD04_RS14945 SM00363 S4 RNA-binding domain RD04_RS14975 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD04_RS15015 SM00382 ATPases associated with a variety of cellular activities RD04_RS15035 SM00487 DEAD-like helicases superfamily RD04_RS15035 SM00490 helicase superfamily c-terminal domain RD04_RS15075 SM00344 helix_turn_helix ASNC type RD04_RS15155 SM00878 Biotin carboxylase C-terminal domain RD04_RS15185 SM00955 RD04_RS15185 RD04_RS15220 SM00344 helix_turn_helix ASNC type RD04_RS15250 SM00957 SecA DEAD-like domain RD04_RS15250 SM00958 SecA preprotein cross-linking domain RD04_RS15270 SM00864 Tubulin/FtsZ family, GTPase domain RD04_RS15270 SM00865 Tubulin/FtsZ family, C-terminal domain RD04_RS15275 SM00842 Cell division protein FtsA RD04_RS15345 SM00382 ATPases associated with a variety of cellular activities RD04_RS15360 SM00151 SWI complex, BAF60b domains RD04_RS15395 SM00344 helix_turn_helix ASNC type RD04_RS15490 SM00986 Uracil DNA glycosylase superfamily RD04_RS15490 SM00987 UreE urease accessory protein, C-terminal domain RD04_RS15495 SM00487 DEAD-like helicases superfamily RD04_RS15495 SM00490 helicase superfamily c-terminal domain RD04_RS15550 SM00996 S-adenosyl-L-homocysteine hydrolase RD04_RS15550 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD04_RS15620 SM00382 ATPases associated with a variety of cellular activities RD04_RS15635 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD04_RS15650 SM00382 ATPases associated with a variety of cellular activities RD04_RS15650 SM01086 C-terminal, D2-small domain, of ClpB protein RD04_RS15670 SM00155 Phospholipase D. Active site motifs. RD04_RS15675 SM00382 ATPases associated with a variety of cellular activities RD04_RS15725 SM00344 helix_turn_helix ASNC type RD04_RS15725 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS15765 SM00422 helix_turn_helix, mercury resistance RD04_RS15765 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS15800 SM00862 Transcriptional regulatory protein, C terminal RD04_RS15810 SM00869 Autotransporter beta-domain RD04_RS15890 SM01400 RD04_RS15890 RD04_RS15910 SM00028 Tetratricopeptide repeats RD04_RS15915 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RD04_RS15915 SM01232 RD04_RS15915 RD04_RS15920 SM00849 Metallo-beta-lactamase superfamily RD04_RS15955 SM00387 Histidine kinase-like ATPases RD04_RS15955 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS15960 SM00448 cheY-homologous receiver domain RD04_RS15960 SM00862 Transcriptional regulatory protein, C terminal RD04_RS16020 SM00984 UDP binding domain RD04_RS16050 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS16105 SM00988 UreE urease accessory protein, N-terminal domain RD04_RS16135 SM00422 helix_turn_helix, mercury resistance RD04_RS16155 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS16155 SM00866 RD04_RS16155 RD04_RS16235 SM00382 ATPases associated with a variety of cellular activities RD04_RS16240 SM00382 ATPases associated with a variety of cellular activities RD04_RS16250 SM00822 RD04_RS16250 RD04_RS16325 SM00849 Metallo-beta-lactamase superfamily RD04_RS16330 SM00257 Lysin motif RD04_RS16370 SM00448 cheY-homologous receiver domain RD04_RS16370 SM00862 Transcriptional regulatory protein, C terminal RD04_RS16375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS16375 SM00387 Histidine kinase-like ATPases RD04_RS16460 SM00382 ATPases associated with a variety of cellular activities RD04_RS16495 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS16495 SM00866 RD04_RS16495 RD04_RS16520 SM00903 Flavin reductase like domain RD04_RS16600 SM00925 MltA specific insert domain RD04_RS16630 SM00905 Dihydroneopterin aldolase RD04_RS16640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD04_RS16700 SM00382 ATPases associated with a variety of cellular activities RD04_RS16720 SM00487 DEAD-like helicases superfamily RD04_RS16720 SM00490 helicase superfamily c-terminal domain RD04_RS16745 SM00382 ATPases associated with a variety of cellular activities RD04_RS16845 SM00382 ATPases associated with a variety of cellular activities RD04_RS16865 SM00116 Domain in cystathionine beta-synthase and other proteins. RD04_RS16895 SM00834 Putative regulatory protein RD04_RS16915 SM00155 Phospholipase D. Active site motifs. RD04_RS16955 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS17025 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD04_RS17035 SM01092 CO dehydrogenase flavoprotein C-terminal domain RD04_RS17065 SM00937 RD04_RS17065 RD04_RS17090 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS17100 SM00881 CoA binding domain RD04_RS17125 SM00344 helix_turn_helix ASNC type RD04_RS17155 SM00881 CoA binding domain RD04_RS17165 SM00829 Enoylreductase RD04_RS17240 SM01130 RD04_RS17240 RD04_RS17300 SM00881 CoA binding domain RD04_RS17305 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS17315 SM00861 Transketolase, pyrimidine binding domain RD04_RS17355 SM00382 ATPases associated with a variety of cellular activities RD04_RS17360 SM00382 ATPases associated with a variety of cellular activities RD04_RS17390 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS17410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD04_RS17410 SM00245 tail specific protease RD04_RS17420 SM00855 Phosphoglycerate mutase family RD04_RS17425 SM00450 Rhodanese Homology Domain RD04_RS17485 SM00382 ATPases associated with a variety of cellular activities RD04_RS17505 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD04_RS17570 SM00347 helix_turn_helix multiple antibiotic resistance protein RD04_RS17585 SM00448 cheY-homologous receiver domain RD04_RS17590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD04_RS17590 SM00387 Histidine kinase-like ATPases RD04_RS17590 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS17655 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS17675 SM00344 helix_turn_helix ASNC type RD04_RS17725 SM00729 Elongator protein 3, MiaB family, Radical SAM RD04_RS17745 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS17745 SM00895 RD04_RS17745 RD04_RS17785 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS17805 SM00869 Autotransporter beta-domain RD04_RS17835 SM01119 RD04_RS17835 RD04_RS17845 SM00244 prohibitin homologues RD04_RS17940 SM00387 Histidine kinase-like ATPases RD04_RS17940 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS17980 SM01234 RD04_RS17980 RD04_RS17995 SM00382 ATPases associated with a variety of cellular activities RD04_RS17995 SM00760 Bacterial dnaA protein helix-turn-helix domain RD04_RS18000 SM00480 DNA polymerase III beta subunit RD04_RS18005 SM00387 Histidine kinase-like ATPases RD04_RS18005 SM00433 TopoisomeraseII RD04_RS18010 SM00346 helix_turn_helix isocitrate lyase regulation RD04_RS18035 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS18035 SM00871 Bacterial transcription activator, effector binding domain RD04_RS18055 SM00422 helix_turn_helix, mercury resistance RD04_RS18060 SM00849 Metallo-beta-lactamase superfamily RD04_RS18090 SM00878 Biotin carboxylase C-terminal domain RD04_RS18090 SM01209 RD04_RS18090 RD04_RS18110 SM01119 RD04_RS18110 RD04_RS18145 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RD04_RS18145 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RD04_RS18145 SM00493 RD04_RS18145 RD04_RS18155 SM00382 ATPases associated with a variety of cellular activities RD04_RS18185 SM00344 helix_turn_helix ASNC type RD04_RS18195 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain RD04_RS18215 SM01018 B12 binding domain RD04_RS18295 SM00838 Elongation factor G C-terminus RD04_RS18295 SM00889 Elongation factor G, domain IV RD04_RS18305 SM01403 RD04_RS18305 RD04_RS18325 SM01382 RD04_RS18325 RD04_RS18325 SM01383 RD04_RS18325 RD04_RS18340 SM00322 K homology RNA-binding domain RD04_RS18375 SM01374 RD04_RS18375 RD04_RS18450 SM00363 S4 RNA-binding domain RD04_RS18450 SM01390 RD04_RS18450 RD04_RS18455 SM00662 RNA polymerases D RD04_RS18485 SM01004 Delta-aminolevulinic acid dehydratase RD04_RS18515 SM01219 RD04_RS18515 RD04_RS18535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD04_RS18585 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS18585 SM00866 RD04_RS18585 RD04_RS18630 SM00382 ATPases associated with a variety of cellular activities RD04_RS18655 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS18655 SM00895 RD04_RS18655 RD04_RS18685 SM01130 RD04_RS18685 RD04_RS18695 SM00257 Lysin motif RD04_RS18745 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS18755 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS18760 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD04_RS18775 SM00382 ATPases associated with a variety of cellular activities RD04_RS18790 SM00829 Enoylreductase RD04_RS18840 SM00382 ATPases associated with a variety of cellular activities RD04_RS18890 SM00984 UDP binding domain RD04_RS18980 SM00100 Cyclic nucleotide-monophosphate binding domain RD04_RS19005 SM00829 Enoylreductase RD04_RS19035 SM00382 ATPases associated with a variety of cellular activities RD04_RS19150 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS19240 SM00342 helix_turn_helix, arabinose operon control protein RD04_RS19350 SM00421 helix_turn_helix, Lux Regulon RD04_RS19390 SM00382 ATPases associated with a variety of cellular activities RD04_RS19405 SM00062 Bacterial periplasmic substrate-binding proteins RD04_RS19410 SM00382 ATPases associated with a variety of cellular activities RD04_RS19430 SM00478 endonuclease III RD04_RS19435 SM00530 Helix-turn-helix XRE-family like proteins RD04_RS19515 SM01060 RD04_RS19515 RD04_RS19525 SM00382 ATPases associated with a variety of cellular activities RD04_RS19545 SM00382 ATPases associated with a variety of cellular activities RD04_RS19550 SM00382 ATPases associated with a variety of cellular activities RD04_RS19580 SM00448 cheY-homologous receiver domain RD04_RS19580 SM00862 Transcriptional regulatory protein, C terminal RD04_RS19585 SM00387 Histidine kinase-like ATPases RD04_RS19585 SM00388 His Kinase A (phosphoacceptor) domain RD04_RS19610 SM00357 Cold shock protein domain