locus-tag class description RD05_RS00005 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related RD05_RS00005 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS00005 IPR026904 GidA associated domain 3 RD05_RS00005 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG RD05_RS00005 IPR020595 MnmG-related, conserved site RD05_RS00010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS00010 IPR003682 rRNA small subunit methyltransferase G RD05_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00015 IPR025669 AAA domain RD05_RS00025 IPR036086 ParB/Sulfiredoxin superfamily RD05_RS00025 IPR003115 ParB/Sulfiredoxin RD05_RS00025 IPR004437 ParB/RepB/Spo0J partition protein RD05_RS00025 IPR041468 ParB/Spo0J, HTH domain RD05_RS00030 IPR037152 L-asparaginase, N-terminal domain superfamily RD05_RS00030 IPR027474 L-asparaginase, N-terminal RD05_RS00030 IPR040919 Asparaginase/glutaminase, C-terminal RD05_RS00030 IPR027473 L-asparaginase, C-terminal RD05_RS00030 IPR027475 Asparaginase/glutaminase, active site 2 RD05_RS00030 IPR020827 Asparaginase/glutaminase, active site 1 RD05_RS00030 IPR006034 Asparaginase/glutaminase-like RD05_RS00030 IPR036152 Asparaginase/glutaminase-like superfamily RD05_RS00030 IPR004550 L-asparaginase, type II RD05_RS00035 IPR037152 L-asparaginase, N-terminal domain superfamily RD05_RS00035 IPR027474 L-asparaginase, N-terminal RD05_RS00035 IPR027473 L-asparaginase, C-terminal RD05_RS00035 IPR040919 Asparaginase/glutaminase, C-terminal RD05_RS00035 IPR027475 Asparaginase/glutaminase, active site 2 RD05_RS00035 IPR020827 Asparaginase/glutaminase, active site 1 RD05_RS00035 IPR006034 Asparaginase/glutaminase-like RD05_RS00035 IPR036152 Asparaginase/glutaminase-like superfamily RD05_RS00035 IPR004550 L-asparaginase, type II RD05_RS00055 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS00055 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain RD05_RS00055 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RD05_RS00055 IPR004161 Translation elongation factor EFTu-like, domain 2 RD05_RS00055 IPR033720 Elongation factor Tu, domain 2 RD05_RS00055 IPR031157 Tr-type G domain, conserved site RD05_RS00055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00055 IPR005225 Small GTP-binding protein domain RD05_RS00055 IPR000795 Transcription factor, GTP-binding domain RD05_RS00055 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RD05_RS00055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RD05_RS00065 IPR038379 SecE superfamily RD05_RS00065 IPR005807 SecE subunit of protein translocation complex, bacterial-like RD05_RS00065 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RD05_RS00070 IPR008991 Translation protein SH3-like domain superfamily RD05_RS00070 IPR014722 Ribosomal protein L2, domain 2 RD05_RS00070 IPR036735 NusG, N-terminal domain superfamily RD05_RS00070 IPR001062 Transcription antitermination protein, NusG RD05_RS00070 IPR006645 NusG, N-terminal RD05_RS00070 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RD05_RS00070 IPR005824 KOW RD05_RS00075 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily RD05_RS00075 IPR006519 Ribosomal protein L11, bacterial-type RD05_RS00075 IPR020783 Ribosomal protein L11, C-terminal RD05_RS00075 IPR000911 Ribosomal protein L11/L12 RD05_RS00075 IPR036769 Ribosomal protein L11, C-terminal domain superfamily RD05_RS00075 IPR020785 Ribosomal protein L11, conserved site RD05_RS00075 IPR020784 Ribosomal protein L11, N-terminal RD05_RS00080 IPR023673 Ribosomal protein L1, conserved site RD05_RS00080 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RD05_RS00080 IPR005878 Ribosomal protein L1, bacterial-type RD05_RS00080 IPR002143 Ribosomal protein L1 RD05_RS00080 IPR023674 Ribosomal protein L1-like RD05_RS00080 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RD05_RS00085 IPR001790 Ribosomal protein L10P RD05_RS00085 IPR002363 Ribosomal protein L10, eubacterial, conserved site RD05_RS00085 IPR022973 Ribosomal protein L10 RD05_RS00090 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily RD05_RS00090 IPR008932 Ribosomal protein L7/L12, oligomerisation RD05_RS00090 IPR013823 Ribosomal protein L7/L12, C-terminal RD05_RS00090 IPR000206 Ribosomal protein L7/L12 RD05_RS00090 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RD05_RS00095 IPR007642 RNA polymerase Rpb2, domain 2 RD05_RS00095 IPR015712 DNA-directed RNA polymerase, subunit 2 RD05_RS00095 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain RD05_RS00095 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily RD05_RS00095 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type RD05_RS00095 IPR007121 RNA polymerase, beta subunit, conserved site RD05_RS00095 IPR007644 RNA polymerase, beta subunit, protrusion RD05_RS00095 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RD05_RS00095 IPR014724 RNA polymerase Rpb2, OB-fold RD05_RS00095 IPR007641 RNA polymerase Rpb2, domain 7 RD05_RS00095 IPR007645 RNA polymerase Rpb2, domain 3 RD05_RS00095 IPR037034 RNA polymerase Rpb2, domain 2 superfamily RD05_RS00100 IPR007066 RNA polymerase Rpb1, domain 3 RD05_RS00100 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RD05_RS00100 IPR007080 RNA polymerase Rpb1, domain 1 RD05_RS00100 IPR038120 RNA polymerase Rpb1, funnel domain superfamily RD05_RS00100 IPR000722 RNA polymerase, alpha subunit RD05_RS00100 IPR007081 RNA polymerase Rpb1, domain 5 RD05_RS00100 IPR042102 RNA polymerase Rpb1, domain 3 superfamily RD05_RS00100 IPR007083 RNA polymerase Rpb1, domain 4 RD05_RS00100 IPR006592 RNA polymerase, N-terminal RD05_RS00130 IPR011006 CheY-like superfamily RD05_RS00130 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS00130 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS00130 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS00130 IPR001789 Signal transduction response regulator, receiver domain RD05_RS00130 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS00140 IPR003673 CoA-transferase family III RD05_RS00140 IPR023606 CoA-transferase family III domain superfamily RD05_RS00155 IPR029069 HotDog domain superfamily RD05_RS00155 IPR002539 MaoC-like dehydratase domain RD05_RS00155 IPR039375 Nodulation protein N-like RD05_RS00160 IPR005119 LysR, substrate-binding RD05_RS00160 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS00160 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS00160 IPR000847 Transcription regulator HTH, LysR RD05_RS00165 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS00165 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS00165 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS00165 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS00185 IPR006194 Glycine-tRNA synthetase, heterodimeric RD05_RS00185 IPR002310 Glycine-tRNA ligase, alpha subunit RD05_RS00190 IPR006194 Glycine-tRNA synthetase, heterodimeric RD05_RS00190 IPR008909 DALR anticodon binding RD05_RS00190 IPR015944 Glycine-tRNA ligase, beta subunit RD05_RS00195 IPR036412 HAD-like superfamily RD05_RS00195 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RD05_RS00195 IPR023214 HAD superfamily RD05_RS00195 IPR006543 Histidinol-phosphate phosphatase RD05_RS00195 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase RD05_RS00200 IPR002123 Phospholipid/glycerol acyltransferase RD05_RS00200 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase RD05_RS00210 IPR037523 Vicinal oxygen chelate (VOC) domain RD05_RS00210 IPR018146 Glyoxalase I, conserved site RD05_RS00210 IPR004361 Glyoxalase I RD05_RS00210 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS00210 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS00215 IPR023635 Peptide deformylase RD05_RS00215 IPR036821 Peptide deformylase superfamily RD05_RS00250 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily RD05_RS00250 IPR003767 Malate/L-lactate dehydrogenase-like RD05_RS00255 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS00255 IPR008220 Homoserine/serine acetyltransferase MetX-like RD05_RS00255 IPR029058 Alpha/Beta hydrolase fold RD05_RS00260 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS00260 IPR008220 Homoserine/serine acetyltransferase MetX-like RD05_RS00260 IPR010743 Methionine biosynthesis MetW RD05_RS00260 IPR029058 Alpha/Beta hydrolase fold RD05_RS00260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS00270 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 RD05_RS00270 IPR011701 Major facilitator superfamily RD05_RS00270 IPR020846 Major facilitator superfamily domain RD05_RS00270 IPR036259 MFS transporter superfamily RD05_RS00280 IPR015942 Asp/Glu/hydantoin racemase RD05_RS00280 IPR001920 Asp/Glu racemase RD05_RS00280 IPR018187 Asp/Glu racemase, active site 1 RD05_RS00280 IPR033134 Asp/Glu racemase, active site 2 RD05_RS00280 IPR004380 Aspartate racemase RD05_RS00285 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS00285 IPR003593 AAA+ ATPase domain RD05_RS00285 IPR003439 ABC transporter-like RD05_RS00285 IPR017871 ABC transporter, conserved site RD05_RS00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS00290 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM RD05_RS00290 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS00290 IPR035906 MetI-like superfamily RD05_RS00295 IPR035906 MetI-like superfamily RD05_RS00295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS00295 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ RD05_RS00295 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS00300 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS00330 IPR005064 Bordetella uptake gene RD05_RS00330 IPR042100 Bordetella uptake gene, domain 1 RD05_RS00345 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS00345 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS00345 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS00345 IPR012675 Beta-grasp domain superfamily RD05_RS00345 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS00345 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS00345 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS00345 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS00345 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS00350 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS00350 IPR004681 TRAP transporter large membrane protein DctM RD05_RS00360 IPR004682 TRAP transporter solute receptor, DctP family RD05_RS00360 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS00360 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS00390 IPR001404 Heat shock protein Hsp90 family RD05_RS00390 IPR019805 Heat shock protein Hsp90, conserved site RD05_RS00390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS00390 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS00390 IPR020575 Heat shock protein Hsp90, N-terminal RD05_RS00390 IPR037196 HSP90, C-terminal domain RD05_RS00390 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS00395 IPR004046 Glutathione S-transferase, C-terminal RD05_RS00395 IPR004045 Glutathione S-transferase, N-terminal RD05_RS00395 IPR036249 Thioredoxin-like superfamily RD05_RS00395 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RD05_RS00395 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS00400 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RD05_RS00400 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily RD05_RS00410 IPR002541 Cytochrome c assembly protein RD05_RS00410 IPR017562 Cytochrome c-type biogenesis protein CcsA RD05_RS00415 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily RD05_RS00415 IPR004780 Signal recognition particle protein RD05_RS00415 IPR022941 Signal recognition particle, SRP54 subunit RD05_RS00415 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RD05_RS00415 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily RD05_RS00415 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD05_RS00415 IPR003593 AAA+ ATPase domain RD05_RS00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00415 IPR013822 Signal recognition particle SRP54, helical bundle RD05_RS00430 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RD05_RS00430 IPR036291 NAD(P)-binding domain superfamily RD05_RS00430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS00440 IPR021260 Lipid II flippase Amj RD05_RS00445 IPR001296 Glycosyl transferase, family 1 RD05_RS00445 IPR000368 Sucrose synthase RD05_RS00450 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RD05_RS00450 IPR003362 Bacterial sugar transferase RD05_RS00450 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ RD05_RS00455 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS00455 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS00455 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS00455 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RD05_RS00465 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain RD05_RS00465 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like RD05_RS00470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS00470 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS00470 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RD05_RS00470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS00475 IPR001451 Hexapeptide repeat RD05_RS00475 IPR011004 Trimeric LpxA-like superfamily RD05_RS00480 IPR000683 Oxidoreductase, N-terminal RD05_RS00480 IPR036291 NAD(P)-binding domain superfamily RD05_RS00480 IPR004104 Oxidoreductase, C-terminal RD05_RS00485 IPR011908 Lipopolysaccharide heptosyltransferase I RD05_RS00485 IPR002201 Glycosyl transferase, family 9 RD05_RS00490 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RD05_RS00490 IPR001296 Glycosyl transferase, family 1 RD05_RS00490 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily RD05_RS00490 IPR039901 3-deoxy-D-manno-octulosonic acid transferase RD05_RS00500 IPR004619 Type III pantothenate kinase RD05_RS00510 IPR030802 ABC transporter permease MalE RD05_RS00510 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RD05_RS00515 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl RD05_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00515 IPR017871 ABC transporter, conserved site RD05_RS00515 IPR003439 ABC transporter-like RD05_RS00515 IPR003593 AAA+ ATPase domain RD05_RS00540 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RD05_RS00540 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RD05_RS00540 IPR015956 Penicillin-binding protein, C-terminal domain superfamily RD05_RS00540 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS00540 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RD05_RS00540 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily RD05_RS00545 IPR036038 Aminotransferase-like, PLP-dependent enzymes RD05_RS00545 IPR005784 D-amino acid aminotransferase RD05_RS00545 IPR018300 Aminotransferase, class IV, conserved site RD05_RS00545 IPR001544 Aminotransferase class IV RD05_RS00550 IPR007454 Uncharacterised protein family UPF0250 RD05_RS00550 IPR027471 YbeD-like domain superfamily RD05_RS00555 IPR020605 Octanoyltransferase, conserved site RD05_RS00555 IPR000544 Octanoyltransferase RD05_RS00555 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RD05_RS00560 IPR031691 Lipoyl synthase, N-terminal RD05_RS00560 IPR013785 Aldolase-type TIM barrel RD05_RS00560 IPR006638 Elp3/MiaB/NifB RD05_RS00560 IPR007197 Radical SAM RD05_RS00560 IPR003698 Lipoyl synthase RD05_RS00565 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related RD05_RS00565 IPR014710 RmlC-like jelly roll fold RD05_RS00565 IPR011051 RmlC-like cupin domain superfamily RD05_RS00570 IPR005913 dTDP-4-dehydrorhamnose reductase family RD05_RS00570 IPR036291 NAD(P)-binding domain superfamily RD05_RS00570 IPR029903 RmlD-like substrate binding domain RD05_RS00575 IPR005888 dTDP-glucose 4,6-dehydratase RD05_RS00575 IPR016040 NAD(P)-binding domain RD05_RS00575 IPR036291 NAD(P)-binding domain superfamily RD05_RS00585 IPR001123 Amino acid exporter protein, LeuE-type RD05_RS00590 IPR006233 Cystathionine beta-lyase, bacterial RD05_RS00590 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS00590 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD05_RS00590 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS00590 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS00595 IPR013766 Thioredoxin domain RD05_RS00595 IPR017937 Thioredoxin, conserved site RD05_RS00595 IPR001853 DSBA-like thioredoxin domain RD05_RS00595 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RD05_RS00595 IPR036249 Thioredoxin-like superfamily RD05_RS00605 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily RD05_RS00605 IPR001278 Arginine-tRNA ligase RD05_RS00605 IPR035684 Arginyl-tRNA synthetase, catalytic core domain RD05_RS00605 IPR008909 DALR anticodon binding RD05_RS00605 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS00605 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RD05_RS00605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS00605 IPR005148 Arginyl tRNA synthetase N-terminal domain RD05_RS00625 IPR035906 MetI-like superfamily RD05_RS00625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS00630 IPR035906 MetI-like superfamily RD05_RS00630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS00635 IPR006059 Bacterial extracellular solute-binding protein RD05_RS00635 IPR006061 Solute-binding family 1, conserved site RD05_RS00640 IPR003593 AAA+ ATPase domain RD05_RS00640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00640 IPR017871 ABC transporter, conserved site RD05_RS00640 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS00640 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC RD05_RS00640 IPR003439 ABC transporter-like RD05_RS00640 IPR040582 MalK, OB fold domain RD05_RS00645 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RD05_RS00645 IPR042283 GpdQ, catalytic alpha/beta sandwich domain RD05_RS00645 IPR042281 GpdQ, beta-strand dimerisation domain RD05_RS00645 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RD05_RS00655 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily RD05_RS00655 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal RD05_RS00655 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RD05_RS00655 IPR004393 Nicotinate-nucleotide pyrophosphorylase RD05_RS00655 IPR013785 Aldolase-type TIM barrel RD05_RS00655 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal RD05_RS00655 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RD05_RS00670 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD05_RS00670 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS00670 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RD05_RS00680 IPR001851 ABC transporter, permease RD05_RS00690 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS00690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00690 IPR003593 AAA+ ATPase domain RD05_RS00690 IPR017871 ABC transporter, conserved site RD05_RS00690 IPR003439 ABC transporter-like RD05_RS00700 IPR028081 Leucine-binding protein domain RD05_RS00700 IPR000709 Leu/Ile/Val-binding protein RD05_RS00700 IPR028082 Periplasmic binding protein-like I RD05_RS00705 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS00705 IPR005119 LysR, substrate-binding RD05_RS00705 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS00705 IPR000847 Transcription regulator HTH, LysR RD05_RS00715 IPR000120 Amidase RD05_RS00715 IPR020556 Amidase, conserved site RD05_RS00715 IPR023631 Amidase signature domain RD05_RS00715 IPR036928 Amidase signature (AS) superfamily RD05_RS00715 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS00720 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS00720 IPR000951 Phthalate dioxygenase reductase RD05_RS00720 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS00720 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS00720 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS00720 IPR012675 Beta-grasp domain superfamily RD05_RS00720 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS00720 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS00720 IPR039003 Carnitine monooxygenase reductase subunit RD05_RS00720 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS00720 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS00725 IPR022925 NADH pyrophosphatase NudC RD05_RS00725 IPR015797 NUDIX hydrolase-like domain superfamily RD05_RS00725 IPR015376 Zinc ribbon, NADH pyrophosphatase RD05_RS00725 IPR020084 NUDIX hydrolase, conserved site RD05_RS00725 IPR000086 NUDIX hydrolase domain RD05_RS00730 IPR009057 Homeobox-like domain superfamily RD05_RS00730 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS00730 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS00735 IPR023606 CoA-transferase family III domain superfamily RD05_RS00735 IPR003673 CoA-transferase family III RD05_RS00740 IPR014031 Beta-ketoacyl synthase, C-terminal RD05_RS00740 IPR014030 Beta-ketoacyl synthase, N-terminal RD05_RS00740 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RD05_RS00740 IPR036291 NAD(P)-binding domain superfamily RD05_RS00740 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RD05_RS00740 IPR013968 Polyketide synthase, ketoreductase domain RD05_RS00740 IPR032821 Ketoacyl-synthetase, C-terminal extension RD05_RS00740 IPR020843 Polyketide synthase, enoylreductase domain RD05_RS00740 IPR013154 Alcohol dehydrogenase, N-terminal RD05_RS00740 IPR042104 Polyketide synthase, dehydratase domain superfamily RD05_RS00740 IPR020807 Polyketide synthase, dehydratase domain RD05_RS00740 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RD05_RS00740 IPR014043 Acyl transferase RD05_RS00740 IPR036736 ACP-like superfamily RD05_RS00740 IPR001227 Acyl transferase domain superfamily RD05_RS00740 IPR006162 Phosphopantetheine attachment site RD05_RS00740 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD05_RS00740 IPR016039 Thiolase-like RD05_RS00740 IPR015083 Polyketide synthase, docking domain RD05_RS00740 IPR011032 GroES-like superfamily RD05_RS00740 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD05_RS00740 IPR018201 Beta-ketoacyl synthase, active site RD05_RS00740 IPR009081 Phosphopantetheine binding ACP domain RD05_RS00745 IPR042100 Bordetella uptake gene, domain 1 RD05_RS00745 IPR005064 Bordetella uptake gene RD05_RS00750 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS00750 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS00750 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS00750 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS00755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00755 IPR003439 ABC transporter-like RD05_RS00755 IPR003593 AAA+ ATPase domain RD05_RS00765 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS00765 IPR035906 MetI-like superfamily RD05_RS00770 IPR010248 Histidine utilization repressor RD05_RS00770 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RD05_RS00770 IPR000524 Transcription regulator HTH, GntR RD05_RS00770 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS00770 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS00770 IPR011663 UbiC transcription regulator-associated RD05_RS00780 IPR005064 Bordetella uptake gene RD05_RS00780 IPR042100 Bordetella uptake gene, domain 1 RD05_RS00785 IPR011663 UbiC transcription regulator-associated RD05_RS00785 IPR000524 Transcription regulator HTH, GntR RD05_RS00785 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS00785 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS00785 IPR010248 Histidine utilization repressor RD05_RS00785 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RD05_RS00800 IPR042100 Bordetella uptake gene, domain 1 RD05_RS00800 IPR005064 Bordetella uptake gene RD05_RS00805 IPR000891 Pyruvate carboxyltransferase RD05_RS00805 IPR013785 Aldolase-type TIM barrel RD05_RS00820 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type RD05_RS00820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS00825 IPR005944 Proline iminopeptidase RD05_RS00825 IPR002410 Peptidase S33 RD05_RS00825 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS00825 IPR029058 Alpha/Beta hydrolase fold RD05_RS00830 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD05_RS00830 IPR012675 Beta-grasp domain superfamily RD05_RS00830 IPR013785 Aldolase-type TIM barrel RD05_RS00830 IPR010035 ThiS, thiamine-biosynthesis RD05_RS00830 IPR033983 Thiazole synthase ThiG RD05_RS00830 IPR003749 Sulfur carrier ThiS/MoaD-like RD05_RS00830 IPR008867 Thiazole synthase RD05_RS00835 IPR007055 BON domain RD05_RS00835 IPR014004 Transport-associated and nodulation domain, bacteria RD05_RS00835 IPR036779 LysM domain superfamily RD05_RS00835 IPR018392 LysM domain RD05_RS00845 IPR013785 Aldolase-type TIM barrel RD05_RS00845 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RD05_RS00845 IPR002220 DapA-like RD05_RS00845 IPR020624 Schiff base-forming aldolase, conserved site RD05_RS00850 IPR003018 GAF domain RD05_RS00850 IPR000614 Free Met sulfoxide reductase conserved site RD05_RS00850 IPR029016 GAF-like domain superfamily RD05_RS00855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS00855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS00855 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS00855 IPR004839 Aminotransferase, class I/classII RD05_RS00860 IPR006370 4-hydroxybenzoate polyprenyltransferase-like RD05_RS00860 IPR030470 UbiA prenyltransferase conserved site RD05_RS00860 IPR000537 UbiA prenyltransferase family RD05_RS00860 IPR039653 Prenyltransferase RD05_RS00875 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS00875 IPR000524 Transcription regulator HTH, GntR RD05_RS00875 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS00875 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS00875 IPR011711 GntR, C-terminal RD05_RS00880 IPR011076 Malate synthase-like superfamily RD05_RS00880 IPR023310 Malate synthase G, beta sub-domain RD05_RS00880 IPR006253 Malate synthase G RD05_RS00880 IPR001465 Malate synthase RD05_RS00900 IPR003593 AAA+ ATPase domain RD05_RS00900 IPR003439 ABC transporter-like RD05_RS00900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00905 IPR035906 MetI-like superfamily RD05_RS00905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS00915 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS00915 IPR000847 Transcription regulator HTH, LysR RD05_RS00915 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS00915 IPR005119 LysR, substrate-binding RD05_RS00925 IPR001296 Glycosyl transferase, family 1 RD05_RS00925 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RD05_RS00930 IPR005064 Bordetella uptake gene RD05_RS00930 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS00930 IPR042100 Bordetella uptake gene, domain 1 RD05_RS00935 IPR006680 Amidohydrolase-related RD05_RS00935 IPR032466 Metal-dependent hydrolase RD05_RS00935 IPR011059 Metal-dependent hydrolase, composite domain superfamily RD05_RS00935 IPR023512 Deaminase MtaD/DadD RD05_RS00940 IPR005119 LysR, substrate-binding RD05_RS00940 IPR037416 Nodulation protein D, PBP2 RD05_RS00940 IPR000847 Transcription regulator HTH, LysR RD05_RS00940 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS00940 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS00950 IPR042100 Bordetella uptake gene, domain 1 RD05_RS00950 IPR005064 Bordetella uptake gene RD05_RS00960 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS00960 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS00960 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD05_RS00970 IPR012910 TonB-dependent receptor, plug domain RD05_RS00970 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS00970 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS00970 IPR039423 TonB-dependent receptor-like RD05_RS00970 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS00970 IPR010105 TonB-dependent siderophore receptor RD05_RS00975 IPR012340 Nucleic acid-binding, OB-fold RD05_RS00975 IPR000424 Primosome PriB/single-strand DNA-binding RD05_RS00975 IPR011344 Single-stranded DNA-binding protein RD05_RS00980 IPR020846 Major facilitator superfamily domain RD05_RS00980 IPR011701 Major facilitator superfamily RD05_RS00980 IPR036259 MFS transporter superfamily RD05_RS00985 IPR004602 UvrABC system subunit A RD05_RS00985 IPR041552 UvrA DNA-binding domain RD05_RS00985 IPR041102 UvrA, interaction domain RD05_RS00985 IPR017871 ABC transporter, conserved site RD05_RS00985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00985 IPR003439 ABC transporter-like RD05_RS00990 IPR036249 Thioredoxin-like superfamily RD05_RS00990 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS00990 IPR040077 Glutathione S-transferase Theta, C-terminal RD05_RS00990 IPR004046 Glutathione S-transferase, C-terminal RD05_RS00990 IPR004045 Glutathione S-transferase, N-terminal RD05_RS00990 IPR040079 Glutathione Transferase family RD05_RS00990 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RD05_RS00995 IPR026875 Phosphohydrolase-associated domain RD05_RS00995 IPR006674 HD domain RD05_RS00995 IPR003607 HD/PDEase domain RD05_RS00995 IPR023023 dNTP triphosphohydrolase, type 2 RD05_RS00995 IPR006261 dNTP triphosphohydrolase RD05_RS01000 IPR030963 3-dehydroquinate synthase family RD05_RS01000 IPR030960 3-dehydroquinate synthase domain RD05_RS01000 IPR016037 3-dehydroquinate synthase AroB RD05_RS01005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01005 IPR023000 Shikimate kinase, conserved site RD05_RS01005 IPR031322 Shikimate kinase/gluconokinase RD05_RS01005 IPR000623 Shikimate kinase/Threonine synthase-like 1 RD05_RS01010 IPR031376 Penicillin-binding protein, OB-like domain RD05_RS01010 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS01010 IPR001264 Glycosyl transferase, family 51 RD05_RS01010 IPR023346 Lysozyme-like domain superfamily RD05_RS01010 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS01010 IPR036950 Penicillin binding protein transglycosylase domain RD05_RS01015 IPR036524 Frataxin/CyaY superfamily RD05_RS01015 IPR002908 Frataxin/CyaY RD05_RS01015 IPR020895 Frataxin conserved site RD05_RS01020 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RD05_RS01020 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RD05_RS01020 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RD05_RS01020 IPR000183 Ornithine/DAP/Arg decarboxylase RD05_RS01020 IPR002986 Diaminopimelate decarboxylase, LysA RD05_RS01020 IPR029066 PLP-binding barrel RD05_RS01020 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD05_RS01025 IPR002541 Cytochrome c assembly protein RD05_RS01025 IPR017562 Cytochrome c-type biogenesis protein CcsA RD05_RS01030 IPR007816 ResB-like domain RD05_RS01030 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB RD05_RS01035 IPR024167 Cytochrome c4-like RD05_RS01035 IPR036909 Cytochrome c-like domain superfamily RD05_RS01035 IPR009056 Cytochrome c-like domain RD05_RS01040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01040 IPR030393 EngB-type guanine nucleotide-binding (G) domain RD05_RS01040 IPR006073 GTP binding domain RD05_RS01040 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RD05_RS01045 IPR001731 Delta-aminolevulinic acid dehydratase RD05_RS01045 IPR030656 Delta-aminolevulinic acid dehydratase, active site RD05_RS01045 IPR013785 Aldolase-type TIM barrel RD05_RS01050 IPR000620 EamA domain RD05_RS01055 IPR022910 Thiol:disulphide interchange protein DsbD RD05_RS01055 IPR003834 Cytochrome C biogenesis protein, transmembrane domain RD05_RS01055 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RD05_RS01055 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily RD05_RS01055 IPR035671 DsbD gamma RD05_RS01055 IPR017937 Thioredoxin, conserved site RD05_RS01055 IPR013766 Thioredoxin domain RD05_RS01055 IPR036249 Thioredoxin-like superfamily RD05_RS01060 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD05_RS01060 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD05_RS01060 IPR004323 Divalent ion tolerance protein, CutA RD05_RS01060 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria RD05_RS01065 IPR019808 Histidine triad, conserved site RD05_RS01065 IPR001310 Histidine triad (HIT) protein RD05_RS01065 IPR011146 HIT-like domain RD05_RS01065 IPR036265 HIT-like superfamily RD05_RS01070 IPR000456 Ribosomal protein L17 RD05_RS01070 IPR036373 Ribosomal protein L17 superfamily RD05_RS01075 IPR036603 RNA polymerase, RBP11-like subunit RD05_RS01075 IPR011260 RNA polymerase, alpha subunit, C-terminal RD05_RS01075 IPR036643 DNA-directed RNA polymerase, insert domain superfamily RD05_RS01075 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RD05_RS01075 IPR011773 DNA-directed RNA polymerase, alpha subunit RD05_RS01075 IPR011262 DNA-directed RNA polymerase, insert domain RD05_RS01080 IPR001912 Ribosomal protein S4/S9, N-terminal RD05_RS01080 IPR002942 RNA-binding S4 domain RD05_RS01080 IPR005709 Ribosomal protein S4, bacterial-type RD05_RS01080 IPR036986 RNA-binding S4 domain superfamily RD05_RS01080 IPR018079 Ribosomal protein S4, conserved site RD05_RS01080 IPR022801 Ribosomal protein S4/S9 RD05_RS01085 IPR001971 Ribosomal protein S11 RD05_RS01085 IPR019981 Ribosomal protein S11, bacterial-type RD05_RS01085 IPR018102 Ribosomal S11, conserved site RD05_RS01085 IPR036967 Ribosomal protein S11 superfamily RD05_RS01090 IPR001892 Ribosomal protein S13 RD05_RS01090 IPR027437 30s ribosomal protein S13, C-terminal RD05_RS01090 IPR010979 Ribosomal protein S13-like, H2TH RD05_RS01090 IPR019980 Ribosomal protein S13, bacterial-type RD05_RS01090 IPR018269 Ribosomal protein S13, conserved site RD05_RS01095 IPR035977 Ribosomal protein L36 superfamily RD05_RS01095 IPR000473 Ribosomal protein L36 RD05_RS01100 IPR004368 Translation initiation factor IF-1 RD05_RS01100 IPR006196 RNA-binding domain, S1, IF1 type RD05_RS01100 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01105 IPR030659 SecY conserved site RD05_RS01105 IPR026593 Protein translocase subunit SecY RD05_RS01105 IPR023201 SecY domain superfamily RD05_RS01105 IPR002208 SecY/SEC61-alpha family RD05_RS01110 IPR021131 Ribosomal protein L18e/L15P RD05_RS01110 IPR005749 Ribosomal protein L15, bacterial-type RD05_RS01110 IPR030878 Ribosomal protein L15 RD05_RS01110 IPR036227 Ribosomal L18e/L15P superfamily RD05_RS01115 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily RD05_RS01115 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RD05_RS01115 IPR018038 Ribosomal protein L30, conserved site RD05_RS01115 IPR005996 Ribosomal protein L30, bacterial-type RD05_RS01120 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS01120 IPR005324 Ribosomal protein S5, C-terminal RD05_RS01120 IPR005712 Ribosomal protein S5, bacterial-type RD05_RS01120 IPR000851 Ribosomal protein S5 RD05_RS01120 IPR018192 Ribosomal protein S5, N-terminal, conserved site RD05_RS01120 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS01120 IPR013810 Ribosomal protein S5, N-terminal RD05_RS01125 IPR004389 Ribosomal protein L18, bacterial-type RD05_RS01125 IPR005484 Ribosomal protein L18 RD05_RS01130 IPR000702 Ribosomal protein L6 RD05_RS01130 IPR002358 Ribosomal protein L6, conserved site RD05_RS01130 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily RD05_RS01130 IPR019906 Ribosomal protein L6, bacterial-type RD05_RS01130 IPR020040 Ribosomal protein L6, alpha-beta domain RD05_RS01135 IPR035987 Ribosomal protein S8 superfamily RD05_RS01135 IPR000630 Ribosomal protein S8 RD05_RS01140 IPR001209 Ribosomal protein S14 RD05_RS01140 IPR023036 Ribosomal protein S14, bacterial/plastid RD05_RS01145 IPR002132 Ribosomal protein L5 RD05_RS01145 IPR020929 Ribosomal protein L5, conserved site RD05_RS01145 IPR031309 Ribosomal protein L5, C-terminal RD05_RS01145 IPR020930 Ribosomal protein L5, bacterial-type RD05_RS01145 IPR031310 Ribosomal protein L5, N-terminal RD05_RS01145 IPR022803 Ribosomal protein L5 domain superfamily RD05_RS01150 IPR041988 Ribosomal Protein L26/L24, KOW domain RD05_RS01150 IPR014722 Ribosomal protein L2, domain 2 RD05_RS01150 IPR008991 Translation protein SH3-like domain superfamily RD05_RS01150 IPR005825 Ribosomal protein L24/L26, conserved site RD05_RS01150 IPR003256 Ribosomal protein L24 RD05_RS01155 IPR036853 Ribosomal protein L14 superfamily RD05_RS01155 IPR000218 Ribosomal protein L14P RD05_RS01155 IPR005745 Ribosomal protein L14P, bacterial-type RD05_RS01155 IPR019972 Ribosomal protein L14P, conserved site RD05_RS01165 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS01165 IPR015590 Aldehyde dehydrogenase domain RD05_RS01165 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS01165 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS01175 IPR019984 30S ribosomal protein S17 RD05_RS01175 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01175 IPR019979 Ribosomal protein S17, conserved site RD05_RS01175 IPR000266 Ribosomal protein S17/S11 RD05_RS01180 IPR018254 Ribosomal protein L29, conserved site RD05_RS01180 IPR036049 Ribosomal protein L29/L35 superfamily RD05_RS01180 IPR001854 Ribosomal protein L29/L35 RD05_RS01185 IPR036920 Ribosomal protein L10e/L16 superfamily RD05_RS01185 IPR016180 Ribosomal protein L10e/L16 RD05_RS01185 IPR000114 Ribosomal protein L16 RD05_RS01185 IPR020798 Ribosomal protein L16, conserved site RD05_RS01190 IPR005704 Ribosomal protein S3, bacterial-type RD05_RS01190 IPR004044 K Homology domain, type 2 RD05_RS01190 IPR015946 K homology domain-like, alpha/beta RD05_RS01190 IPR004087 K Homology domain RD05_RS01190 IPR001351 Ribosomal protein S3, C-terminal RD05_RS01190 IPR036419 Ribosomal protein S3, C-terminal domain superfamily RD05_RS01190 IPR009019 K homology domain superfamily, prokaryotic type RD05_RS01190 IPR018280 Ribosomal protein S3, conserved site RD05_RS01195 IPR036394 Ribosomal protein L22/L17 superfamily RD05_RS01195 IPR018260 Ribosomal protein L22/L17, conserved site RD05_RS01195 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RD05_RS01195 IPR001063 Ribosomal protein L22/L17 RD05_RS01200 IPR002222 Ribosomal protein S19/S15 RD05_RS01200 IPR005732 Ribosomal protein S19, bacterial-type RD05_RS01200 IPR020934 Ribosomal protein S19 conserved site RD05_RS01200 IPR023575 Ribosomal protein S19, superfamily RD05_RS01205 IPR014726 Ribosomal protein L2, domain 3 RD05_RS01205 IPR022671 Ribosomal protein L2, conserved site RD05_RS01205 IPR022669 Ribosomal protein L2, C-terminal RD05_RS01205 IPR005880 Ribosomal protein L2, bacterial/organellar-type RD05_RS01205 IPR002171 Ribosomal protein L2 RD05_RS01205 IPR014722 Ribosomal protein L2, domain 2 RD05_RS01205 IPR022666 Ribosomal Proteins L2, RNA binding domain RD05_RS01205 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01205 IPR008991 Translation protein SH3-like domain superfamily RD05_RS01210 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily RD05_RS01210 IPR012678 Ribosomal protein L23/L15e core domain superfamily RD05_RS01210 IPR013025 Ribosomal protein L25/L23 RD05_RS01215 IPR002136 Ribosomal protein L4/L1e RD05_RS01215 IPR023574 Ribosomal protein L4 domain superfamily RD05_RS01215 IPR013005 50S ribosomal protein uL4 RD05_RS01220 IPR000597 Ribosomal protein L3 RD05_RS01220 IPR019926 Ribosomal protein L3, conserved site RD05_RS01220 IPR019927 Ribosomal protein L3, bacterial/organelle-type RD05_RS01220 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS01225 IPR036838 Ribosomal protein S10 domain superfamily RD05_RS01225 IPR027486 Ribosomal protein S10 domain RD05_RS01225 IPR018268 Ribosomal protein S10, conserved site RD05_RS01225 IPR001848 Ribosomal protein S10 RD05_RS01230 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS01230 IPR031157 Tr-type G domain, conserved site RD05_RS01230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01230 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RD05_RS01230 IPR033720 Elongation factor Tu, domain 2 RD05_RS01230 IPR004161 Translation elongation factor EFTu-like, domain 2 RD05_RS01230 IPR000795 Transcription factor, GTP-binding domain RD05_RS01230 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain RD05_RS01230 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RD05_RS01230 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RD05_RS01230 IPR005225 Small GTP-binding protein domain RD05_RS01235 IPR004540 Translation elongation factor EFG/EF2 RD05_RS01235 IPR041095 Elongation Factor G, domain II RD05_RS01235 IPR009022 Elongation factor G, domain III RD05_RS01235 IPR035647 EF-G domain III/V-like RD05_RS01235 IPR035649 EFG, domain V RD05_RS01235 IPR000640 Elongation factor EFG, domain V-like RD05_RS01235 IPR004161 Translation elongation factor EFTu-like, domain 2 RD05_RS01235 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS01235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01235 IPR031157 Tr-type G domain, conserved site RD05_RS01235 IPR005517 Translation elongation factor EFG/EF2, domain IV RD05_RS01235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS01235 IPR005225 Small GTP-binding protein domain RD05_RS01235 IPR000795 Transcription factor, GTP-binding domain RD05_RS01235 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS01240 IPR023798 Ribosomal protein S7 domain RD05_RS01240 IPR020606 Ribosomal protein S7, conserved site RD05_RS01240 IPR005717 Ribosomal protein S7, bacterial/organellar-type RD05_RS01240 IPR036823 Ribosomal protein S7 domain superfamily RD05_RS01240 IPR000235 Ribosomal protein S5/S7 RD05_RS01245 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01245 IPR006032 Ribosomal protein S12/S23 RD05_RS01245 IPR005679 Ribosomal protein S12, bacterial-type RD05_RS01255 IPR003148 Regulator of K+ conductance, N-terminal RD05_RS01255 IPR036291 NAD(P)-binding domain superfamily RD05_RS01255 IPR013099 Potassium channel domain RD05_RS01265 IPR002549 Transmembrane protein TqsA-like RD05_RS01275 IPR011914 RfaE bifunctional protein, domain II RD05_RS01275 IPR004821 Cytidyltransferase-like domain RD05_RS01275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS01280 IPR003423 Outer membrane efflux protein RD05_RS01280 IPR010130 Type I secretion outer membrane protein, TolC RD05_RS01290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS01290 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RD05_RS01295 IPR029056 Ribokinase-like RD05_RS01295 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RD05_RS01295 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD05_RS01300 IPR008867 Thiazole synthase RD05_RS01300 IPR033983 Thiazole synthase ThiG RD05_RS01300 IPR013785 Aldolase-type TIM barrel RD05_RS01305 IPR002491 ABC transporter periplasmic binding domain RD05_RS01305 IPR023544 ABC transporter, vitamin B12-binding protein RD05_RS01310 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS01310 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS01310 IPR012910 TonB-dependent receptor, plug domain RD05_RS01310 IPR039426 Vitamin B12 transporter BtuB-like RD05_RS01310 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS01310 IPR010101 TonB-dependent vitamin B12 transporter BtuB RD05_RS01315 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RD05_RS01315 IPR006158 Cobalamin (vitamin B12)-binding domain RD05_RS01315 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily RD05_RS01315 IPR000489 Pterin-binding domain RD05_RS01315 IPR036594 Methionine synthase domain RD05_RS01315 IPR011822 Cobalamin-dependent methionine synthase RD05_RS01315 IPR033706 Methionine synthase, B12-binding domain RD05_RS01315 IPR036589 Homocysteine-binding domain superfamily RD05_RS01315 IPR003726 Homocysteine-binding domain RD05_RS01315 IPR011005 Dihydropteroate synthase-like RD05_RS01315 IPR036724 Cobalamin-binding domain superfamily RD05_RS01315 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RD05_RS01330 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RD05_RS01330 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RD05_RS01340 IPR021134 Bestrophin/UPF0187 RD05_RS01345 IPR000485 AsnC-type HTH domain RD05_RS01345 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01345 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01345 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS01345 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS01345 IPR019888 Transcription regulator AsnC-type RD05_RS01345 IPR011008 Dimeric alpha-beta barrel RD05_RS01350 IPR029061 Thiamin diphosphate-binding fold RD05_RS01350 IPR000399 TPP-binding enzyme, conserved site RD05_RS01350 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS01350 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS01350 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS01350 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS01350 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS01350 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS01355 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS01355 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS01355 IPR036291 NAD(P)-binding domain superfamily RD05_RS01360 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS01360 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS01360 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS01360 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS01360 IPR015590 Aldehyde dehydrogenase domain RD05_RS01360 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RD05_RS01365 IPR036291 NAD(P)-binding domain superfamily RD05_RS01365 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS01365 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS01370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS01370 IPR035906 MetI-like superfamily RD05_RS01375 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01375 IPR003593 AAA+ ATPase domain RD05_RS01375 IPR003439 ABC transporter-like RD05_RS01375 IPR017871 ABC transporter, conserved site RD05_RS01375 IPR015859 ABC transporter, taurine import, TauD RD05_RS01385 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 RD05_RS01385 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RD05_RS01385 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RD05_RS01385 IPR006171 TOPRIM domain RD05_RS01385 IPR013497 DNA topoisomerase, type IA, central RD05_RS01385 IPR003601 DNA topoisomerase, type IA, domain 2 RD05_RS01385 IPR000380 DNA topoisomerase, type IA RD05_RS01385 IPR023405 DNA topoisomerase, type IA, core domain RD05_RS01385 IPR023406 DNA topoisomerase, type IA, active site RD05_RS01385 IPR005738 DNA topoisomerase III RD05_RS01385 IPR034144 DNA topoisomerase 3-like, TOPRIM domain RD05_RS01385 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RD05_RS01400 IPR007456 Smg RD05_RS01405 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS01405 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RD05_RS01405 IPR039426 Vitamin B12 transporter BtuB-like RD05_RS01405 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS01405 IPR010917 TonB-dependent receptor, conserved site RD05_RS01405 IPR012910 TonB-dependent receptor, plug domain RD05_RS01405 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS01405 IPR011276 TonB-dependent haem/haemoglobin receptor RD05_RS01415 IPR011852 TRAP transporter solute receptor, TAXI family RD05_RS01420 IPR029066 PLP-binding barrel RD05_RS01420 IPR042208 D-serine dehydratase-like domain superfamily RD05_RS01420 IPR026956 D-serine dehydratase-like domain RD05_RS01420 IPR001608 Alanine racemase, N-terminal RD05_RS01425 IPR005064 Bordetella uptake gene RD05_RS01425 IPR042100 Bordetella uptake gene, domain 1 RD05_RS01430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS01430 IPR005814 Aminotransferase class-III RD05_RS01430 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS01430 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS01430 IPR004636 Acetylornithine/Succinylornithine transaminase family RD05_RS01440 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS01440 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS01440 IPR011054 Rudiment single hybrid motif RD05_RS01440 IPR011761 ATP-grasp fold RD05_RS01440 IPR005482 Biotin carboxylase, C-terminal RD05_RS01440 IPR011764 Biotin carboxylation domain RD05_RS01440 IPR001882 Biotin-binding site RD05_RS01440 IPR005481 Biotin carboxylase-like, N-terminal domain RD05_RS01440 IPR000089 Biotin/lipoyl attachment RD05_RS01440 IPR011053 Single hybrid motif RD05_RS01445 IPR034733 Acetyl-CoA carboxylase RD05_RS01445 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS01445 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RD05_RS01445 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RD05_RS01450 IPR020610 Thiolase, active site RD05_RS01450 IPR020616 Thiolase, N-terminal RD05_RS01450 IPR002155 Thiolase RD05_RS01450 IPR016039 Thiolase-like RD05_RS01450 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS01450 IPR020617 Thiolase, C-terminal RD05_RS01450 IPR020613 Thiolase, conserved site RD05_RS01460 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS01460 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS01460 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS01460 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS01460 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS01460 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS01460 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS01475 IPR000551 MerR-type HTH domain RD05_RS01475 IPR009061 Putative DNA-binding domain superfamily RD05_RS01475 IPR015358 Transcription regulator MerR, DNA binding RD05_RS01475 IPR011789 Cu(I)-responsive transcriptional regulator RD05_RS01480 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS01480 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS01480 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS01480 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS01480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS01480 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS01480 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS01500 IPR013785 Aldolase-type TIM barrel RD05_RS01500 IPR000262 FMN-dependent dehydrogenase RD05_RS01500 IPR037396 FMN hydroxy acid dehydrogenase domain RD05_RS01500 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD05_RS01500 IPR020920 L-lactate dehydrogenase, bacterial RD05_RS01500 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD05_RS01510 IPR042100 Bordetella uptake gene, domain 1 RD05_RS01510 IPR005064 Bordetella uptake gene RD05_RS01515 IPR023631 Amidase signature domain RD05_RS01515 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS01515 IPR036928 Amidase signature (AS) superfamily RD05_RS01515 IPR020556 Amidase, conserved site RD05_RS01515 IPR000120 Amidase RD05_RS01520 IPR029016 GAF-like domain superfamily RD05_RS01520 IPR014757 Transcription regulator IclR, C-terminal RD05_RS01520 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01520 IPR005471 Transcription regulator IclR, N-terminal RD05_RS01520 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01525 IPR001241 DNA topoisomerase, type IIA RD05_RS01525 IPR002288 DNA gyrase B subunit, C-terminal RD05_RS01525 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS01525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS01525 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS01525 IPR041423 DNA gyrase subunit B insert domain RD05_RS01525 IPR011557 DNA gyrase, subunit B RD05_RS01525 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RD05_RS01525 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal RD05_RS01525 IPR018522 DNA topoisomerase, type IIA, conserved site RD05_RS01525 IPR006171 TOPRIM domain RD05_RS01525 IPR034160 DNA gyrase subunit B, TOPRIM domain RD05_RS01525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS01525 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RD05_RS01530 IPR022637 DNA polymerase III, beta sliding clamp, central RD05_RS01530 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal RD05_RS01530 IPR001001 DNA polymerase III, beta sliding clamp RD05_RS01530 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal RD05_RS01535 IPR013317 Chromosomal replication initiator protein DnaA RD05_RS01535 IPR013159 Chromosomal replication initiator, DnaA C-terminal RD05_RS01535 IPR001957 Chromosomal replication control, initiator DnaA RD05_RS01535 IPR003593 AAA+ ATPase domain RD05_RS01535 IPR024633 DnaA N-terminal domain RD05_RS01535 IPR038454 DnaA, N-terminal domain superfamily RD05_RS01535 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01535 IPR010921 Trp repressor/replication initiator RD05_RS01535 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RD05_RS01535 IPR020591 Chromosomal replication control, initiator DnaA-like RD05_RS01540 IPR000271 Ribosomal protein L34 RD05_RS01540 IPR020939 Ribosomal protein L34, conserved site RD05_RS01545 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS01545 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS01545 IPR000100 Ribonuclease P RD05_RS01545 IPR020539 Ribonuclease P, conserved site RD05_RS01550 IPR002696 Putative membrane protein insertion efficiency factor RD05_RS01555 IPR019998 Membrane insertase YidC RD05_RS01555 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RD05_RS01555 IPR028053 Membrane insertase YidC, N-terminal RD05_RS01555 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 RD05_RS01555 IPR038210 Membrane insertase YidC, periplasmic domain RD05_RS01555 IPR038221 YidC, periplasmic domain superfamily RD05_RS01565 IPR029039 Flavoprotein-like superfamily RD05_RS01565 IPR003680 Flavodoxin-like fold RD05_RS01565 IPR023048 NADH-azoreductase, FMN-dependent RD05_RS01570 IPR005119 LysR, substrate-binding RD05_RS01570 IPR000847 Transcription regulator HTH, LysR RD05_RS01570 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01570 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01585 IPR005467 Histidine kinase domain RD05_RS01585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS01585 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS01585 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS01585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS01585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS01590 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS01590 IPR013762 Integrase-like, catalytic domain superfamily RD05_RS01590 IPR002104 Integrase, catalytic domain RD05_RS01590 IPR010998 Integrase/recombinase, N-terminal RD05_RS01625 IPR018330 RecT family RD05_RS01625 IPR004590 DNA single-strand annealing protein RecT RD05_RS01670 IPR006175 YjgF/YER057c/UK114 family RD05_RS01670 IPR019898 Putative aminoacrylate peracid reductase RutC RD05_RS01670 IPR035959 RutC-like superfamily RD05_RS01680 IPR001107 Band 7 domain RD05_RS01680 IPR036013 Band 7/SPFH domain superfamily RD05_RS01680 IPR010200 HflC RD05_RS01685 IPR010879 Domain of unknown function DUF1508 RD05_RS01685 IPR036913 YegP-like superfamily RD05_RS01690 IPR042208 D-serine dehydratase-like domain superfamily RD05_RS01690 IPR029066 PLP-binding barrel RD05_RS01690 IPR026956 D-serine dehydratase-like domain RD05_RS01690 IPR001608 Alanine racemase, N-terminal RD05_RS01700 IPR005119 LysR, substrate-binding RD05_RS01700 IPR000847 Transcription regulator HTH, LysR RD05_RS01700 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01700 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01720 IPR005546 Autotransporter beta-domain RD05_RS01720 IPR011050 Pectin lyase fold/virulence factor RD05_RS01720 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS01720 IPR011050 Pectin lyase fold/virulence factor RD05_RS01720 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS01720 IPR006315 Outer membrane autotransporter barrel RD05_RS01720 IPR013425 Autotransporter-associated beta strand repeat RD05_RS01720 IPR036709 Autotransporter beta-domain superfamily RD05_RS01720 IPR005546 Autotransporter beta-domain RD05_RS01720 IPR036709 Autotransporter beta-domain superfamily RD05_RS01720 IPR013425 Autotransporter-associated beta strand repeat RD05_RS01720 IPR006315 Outer membrane autotransporter barrel RD05_RS01730 IPR005064 Bordetella uptake gene RD05_RS01730 IPR042100 Bordetella uptake gene, domain 1 RD05_RS01735 IPR000873 AMP-dependent synthetase/ligase RD05_RS01735 IPR020845 AMP-binding, conserved site RD05_RS01735 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS01740 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01740 IPR005471 Transcription regulator IclR, N-terminal RD05_RS01740 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01740 IPR029016 GAF-like domain superfamily RD05_RS01740 IPR014757 Transcription regulator IclR, C-terminal RD05_RS01745 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS01745 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS01745 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS01750 IPR004675 Alkylhydroperoxidase AhpD core RD05_RS01750 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS01750 IPR029032 AhpD-like RD05_RS01755 IPR005064 Bordetella uptake gene RD05_RS01755 IPR042100 Bordetella uptake gene, domain 1 RD05_RS01765 IPR006035 Ureohydrolase RD05_RS01765 IPR020855 Ureohydrolase, manganese-binding site RD05_RS01765 IPR014033 Arginase RD05_RS01765 IPR023696 Ureohydrolase domain superfamily RD05_RS01770 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS01770 IPR034757 Ornithine aminotransferase, bacterial type RD05_RS01770 IPR010164 Ornithine aminotransferase RD05_RS01770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS01770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS01770 IPR005814 Aminotransferase class-III RD05_RS01780 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01780 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01780 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS01780 IPR011711 GntR, C-terminal RD05_RS01780 IPR000524 Transcription regulator HTH, GntR RD05_RS01785 IPR042100 Bordetella uptake gene, domain 1 RD05_RS01785 IPR005064 Bordetella uptake gene RD05_RS01790 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS01790 IPR006076 FAD dependent oxidoreductase RD05_RS01795 IPR004370 4-oxalocrotonate tautomerase RD05_RS01795 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type RD05_RS01795 IPR014347 Tautomerase/MIF superfamily RD05_RS01800 IPR007197 Radical SAM RD05_RS01800 IPR005839 Methylthiotransferase RD05_RS01800 IPR006638 Elp3/MiaB/NifB RD05_RS01800 IPR005840 Ribosomal protein S12 methylthiotransferase RimO RD05_RS01800 IPR023404 Radical SAM, alpha/beta horseshoe RD05_RS01800 IPR002792 TRAM domain RD05_RS01800 IPR013848 Methylthiotransferase, N-terminal RD05_RS01800 IPR041582 RimO, TRAM domain RD05_RS01800 IPR038135 Methylthiotransferase, N-terminal domain superfamily RD05_RS01800 IPR020612 Methylthiotransferase, conserved site RD05_RS01810 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RD05_RS01810 IPR031100 LOG family RD05_RS01820 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RD05_RS01820 IPR041492 Haloacid dehalogenase-like hydrolase RD05_RS01820 IPR006439 HAD hydrolase, subfamily IA RD05_RS01820 IPR023214 HAD superfamily RD05_RS01820 IPR036412 HAD-like superfamily RD05_RS01830 IPR001555 Phosphoribosylglycinamide formyltransferase, active site RD05_RS01830 IPR002376 Formyl transferase, N-terminal RD05_RS01830 IPR037022 Formyl transferase, C-terminal domain superfamily RD05_RS01830 IPR005793 Formyl transferase, C-terminal RD05_RS01830 IPR011034 Formyl transferase-like, C-terminal domain superfamily RD05_RS01830 IPR036477 Formyl transferase, N-terminal domain superfamily RD05_RS01830 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain RD05_RS01830 IPR005794 Methionyl-tRNA formyltransferase RD05_RS01840 IPR023635 Peptide deformylase RD05_RS01840 IPR036821 Peptide deformylase superfamily RD05_RS01845 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS01845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS01845 IPR000192 Aminotransferase class V domain RD05_RS01845 IPR010111 Kynureninase RD05_RS01845 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS01850 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01850 IPR011008 Dimeric alpha-beta barrel RD05_RS01850 IPR019888 Transcription regulator AsnC-type RD05_RS01850 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01850 IPR011991 ArsR-like helix-turn-helix domain RD05_RS01850 IPR000485 AsnC-type HTH domain RD05_RS01850 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS01850 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS01855 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01855 IPR041614 DprA, winged helix domain RD05_RS01855 IPR003488 DNA recombination-mediator protein A RD05_RS01860 IPR000891 Pyruvate carboxyltransferase RD05_RS01860 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site RD05_RS01860 IPR013785 Aldolase-type TIM barrel RD05_RS01870 IPR018313 Solute-binding protein family 3, conserved site RD05_RS01870 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS01870 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter RD05_RS01875 IPR004839 Aminotransferase, class I/classII RD05_RS01875 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS01875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS01875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS01880 IPR011078 Pyridoxal phosphate homeostasis protein RD05_RS01880 IPR029066 PLP-binding barrel RD05_RS01880 IPR001608 Alanine racemase, N-terminal RD05_RS01885 IPR005064 Bordetella uptake gene RD05_RS01885 IPR042100 Bordetella uptake gene, domain 1 RD05_RS01895 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01895 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01895 IPR000847 Transcription regulator HTH, LysR RD05_RS01895 IPR005119 LysR, substrate-binding RD05_RS01895 IPR017685 HTH-type transcriptional regulator ArgP RD05_RS01900 IPR001123 Amino acid exporter protein, LeuE-type RD05_RS01900 IPR004777 L-lysine exporter/arginine exporter RD05_RS01920 IPR036291 NAD(P)-binding domain superfamily RD05_RS01920 IPR002811 Aspartate dehydrogenase RD05_RS01920 IPR011182 L-aspartate dehydrogenase RD05_RS01920 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD05_RS01920 IPR020626 L-aspartate dehydrogenase, prokaryotic RD05_RS01930 IPR006027 NusB/RsmB/TIM44 RD05_RS01930 IPR023267 RNA (C5-cytosine) methyltransferase RD05_RS01930 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RD05_RS01930 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type RD05_RS01930 IPR004573 rRNA small subunit methyltransferase B RD05_RS01930 IPR035926 NusB-like superfamily RD05_RS01930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS01940 IPR013767 PAS fold RD05_RS01940 IPR035965 PAS domain superfamily RD05_RS01940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS01940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS01940 IPR003660 HAMP domain RD05_RS01940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS01940 IPR005467 Histidine kinase domain RD05_RS01940 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS01940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS01940 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator RD05_RS01940 IPR000014 PAS domain RD05_RS01945 IPR001789 Signal transduction response regulator, receiver domain RD05_RS01945 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01945 IPR025944 Sigma-54 interaction domain, conserved site RD05_RS01945 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS01945 IPR002197 DNA binding HTH domain, Fis-type RD05_RS01945 IPR009057 Homeobox-like domain superfamily RD05_RS01945 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD05_RS01945 IPR003593 AAA+ ATPase domain RD05_RS01945 IPR011006 CheY-like superfamily RD05_RS01945 IPR002078 RNA polymerase sigma factor 54 interaction domain RD05_RS01950 IPR036291 NAD(P)-binding domain superfamily RD05_RS01950 IPR006037 Regulator of K+ conductance, C-terminal RD05_RS01950 IPR003148 Regulator of K+ conductance, N-terminal RD05_RS01950 IPR006036 Potassium uptake protein TrkA RD05_RS01950 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RD05_RS01955 IPR004772 TrkH potassium transport family RD05_RS01955 IPR003445 Cation transporter RD05_RS01960 IPR000835 MarR-type HTH domain RD05_RS01960 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS01960 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS01960 IPR023187 Transcriptional regulator MarR-type, conserved site RD05_RS01970 IPR017615 Xanthine dehydrogenase, accessory protein PucB RD05_RS01970 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS01970 IPR025877 MobA-like NTP transferase RD05_RS01980 IPR028615 Maleate isomerase RD05_RS01980 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RD05_RS01985 IPR029058 Alpha/Beta hydrolase fold RD05_RS01985 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS01995 IPR036380 Isochorismatase-like superfamily RD05_RS01995 IPR000868 Isochorismatase-like RD05_RS02005 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RD05_RS02005 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS02005 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RD05_RS02005 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD05_RS02005 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD05_RS02010 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS02010 IPR023753 FAD/NAD(P)-binding domain RD05_RS02010 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RD05_RS02010 IPR028202 Reductase, C-terminal RD05_RS02015 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS02015 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RD05_RS02020 IPR041722 Alpha-keto acid binding periplasmic protein RD05_RS02020 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS02020 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS02020 IPR026289 Solute binding protein, TakP-like RD05_RS02020 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS02025 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD05_RS02025 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RD05_RS02025 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RD05_RS02025 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD05_RS02030 IPR016166 FAD-binding domain, PCMH-type RD05_RS02030 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS02030 IPR016167 FAD-binding, type PCMH, subdomain 1 RD05_RS02030 IPR016169 FAD-binding, type PCMH, subdomain 2 RD05_RS02030 IPR002346 Molybdopterin dehydrogenase, FAD-binding RD05_RS02030 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RD05_RS02030 IPR005107 CO dehydrogenase flavoprotein, C-terminal RD05_RS02035 IPR002888 [2Fe-2S]-binding RD05_RS02035 IPR012675 Beta-grasp domain superfamily RD05_RS02035 IPR036884 [2Fe-2S]-binding domain superfamily RD05_RS02035 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS02035 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS02035 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS02045 IPR017871 ABC transporter, conserved site RD05_RS02045 IPR015859 ABC transporter, taurine import, TauD RD05_RS02045 IPR003439 ABC transporter-like RD05_RS02045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02045 IPR003593 AAA+ ATPase domain RD05_RS02050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS02050 IPR035906 MetI-like superfamily RD05_RS02060 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS02060 IPR004681 TRAP transporter large membrane protein DctM RD05_RS02065 IPR011793 Putative glutamate--cysteine ligase YbdK RD05_RS02065 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RD05_RS02065 IPR006336 Glutamate--cysteine ligase, GCS2 RD05_RS02070 IPR013216 Methyltransferase type 11 RD05_RS02070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS02070 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RD05_RS02080 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS02080 IPR029028 Alpha/beta knot methyltransferases RD05_RS02080 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD05_RS02080 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RD05_RS02085 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02085 IPR005064 Bordetella uptake gene RD05_RS02090 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RD05_RS02090 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RD05_RS02090 IPR036291 NAD(P)-binding domain superfamily RD05_RS02090 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS02090 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS02090 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RD05_RS02095 IPR035958 SecB-like superfamily RD05_RS02095 IPR003708 Bacterial protein export chaperone SecB RD05_RS02100 IPR011767 Glutaredoxin active site RD05_RS02100 IPR014025 Glutaredoxin subgroup RD05_RS02100 IPR002109 Glutaredoxin RD05_RS02100 IPR011900 Glutaredoxin, GrxC RD05_RS02100 IPR036249 Thioredoxin-like superfamily RD05_RS02105 IPR036873 Rhodanese-like domain superfamily RD05_RS02105 IPR020936 Uncharacterised protein family UPF0176 RD05_RS02105 IPR022111 Rhodanase, C-terminal RD05_RS02105 IPR001763 Rhodanese-like domain RD05_RS02105 IPR040503 UPF0176, acylphosphatase-like domain RD05_RS02110 IPR005952 Phosphoglycerate mutase 1 RD05_RS02110 IPR013078 Histidine phosphatase superfamily, clade-1 RD05_RS02110 IPR029033 Histidine phosphatase superfamily RD05_RS02110 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RD05_RS02115 IPR011055 Duplicated hybrid motif RD05_RS02115 IPR016047 Peptidase M23 RD05_RS02120 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02120 IPR001478 PDZ domain RD05_RS02120 IPR005151 Tail specific protease RD05_RS02120 IPR036034 PDZ superfamily RD05_RS02120 IPR004447 C-terminal-processing peptidase S41A RD05_RS02125 IPR035985 Ubiquitin-activating enzyme RD05_RS02125 IPR012730 Molybdopterin synthase sulfurylase MoeB RD05_RS02125 IPR000594 THIF-type NAD/FAD binding fold RD05_RS02135 IPR005064 Bordetella uptake gene RD05_RS02135 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02150 IPR005064 Bordetella uptake gene RD05_RS02150 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02165 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RD05_RS02165 IPR023753 FAD/NAD(P)-binding domain RD05_RS02165 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS02165 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RD05_RS02165 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD05_RS02165 IPR006258 Dihydrolipoamide dehydrogenase RD05_RS02165 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS02170 IPR017871 ABC transporter, conserved site RD05_RS02170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02170 IPR003439 ABC transporter-like RD05_RS02170 IPR003593 AAA+ ATPase domain RD05_RS02170 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS02175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02175 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS02175 IPR017871 ABC transporter, conserved site RD05_RS02175 IPR003439 ABC transporter-like RD05_RS02175 IPR003593 AAA+ ATPase domain RD05_RS02180 IPR001851 ABC transporter, permease RD05_RS02185 IPR028081 Leucine-binding protein domain RD05_RS02185 IPR000709 Leu/Ile/Val-binding protein RD05_RS02185 IPR028082 Periplasmic binding protein-like I RD05_RS02195 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS02195 IPR000873 AMP-dependent synthetase/ligase RD05_RS02195 IPR020845 AMP-binding, conserved site RD05_RS02195 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS02200 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS02200 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS02200 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02200 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02200 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS02200 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02205 IPR006255 Dihydrolipoamide succinyltransferase RD05_RS02205 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS02205 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD05_RS02205 IPR011053 Single hybrid motif RD05_RS02205 IPR036625 E3-binding domain superfamily RD05_RS02205 IPR004167 Peripheral subunit-binding domain RD05_RS02205 IPR000089 Biotin/lipoyl attachment RD05_RS02205 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RD05_RS02210 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS02210 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS02210 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS02210 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02215 IPR033248 Transketolase, C-terminal domain RD05_RS02215 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RD05_RS02215 IPR005475 Transketolase-like, pyrimidine-binding domain RD05_RS02215 IPR029061 Thiamin diphosphate-binding fold RD05_RS02220 IPR001017 Dehydrogenase, E1 component RD05_RS02220 IPR029061 Thiamin diphosphate-binding fold RD05_RS02230 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS02230 IPR011761 ATP-grasp fold RD05_RS02230 IPR003781 CoA-binding RD05_RS02230 IPR036291 NAD(P)-binding domain superfamily RD05_RS02230 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RD05_RS02230 IPR016102 Succinyl-CoA synthetase-like RD05_RS02235 IPR005064 Bordetella uptake gene RD05_RS02235 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02240 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS02240 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS02240 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02240 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02240 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS02240 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02240 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS02245 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02245 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS02245 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS02245 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RD05_RS02250 IPR016039 Thiolase-like RD05_RS02250 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD05_RS02250 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RD05_RS02250 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RD05_RS02265 IPR002539 MaoC-like dehydratase domain RD05_RS02265 IPR003965 Fatty acid synthase RD05_RS02265 IPR029069 HotDog domain superfamily RD05_RS02270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS02270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02270 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS02270 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS02270 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS02275 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02275 IPR005064 Bordetella uptake gene RD05_RS02280 IPR003673 CoA-transferase family III RD05_RS02280 IPR023606 CoA-transferase family III domain superfamily RD05_RS02285 IPR005119 LysR, substrate-binding RD05_RS02285 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain RD05_RS02285 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS02285 IPR000847 Transcription regulator HTH, LysR RD05_RS02285 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS02290 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RD05_RS02290 IPR020625 Schiff base-forming aldolase, active site RD05_RS02290 IPR002220 DapA-like RD05_RS02290 IPR013785 Aldolase-type TIM barrel RD05_RS02310 IPR005064 Bordetella uptake gene RD05_RS02310 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02315 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS02315 IPR005119 LysR, substrate-binding RD05_RS02315 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain RD05_RS02315 IPR000847 Transcription regulator HTH, LysR RD05_RS02315 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS02320 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS02320 IPR016169 FAD-binding, type PCMH, subdomain 2 RD05_RS02320 IPR006094 FAD linked oxidase, N-terminal RD05_RS02320 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 RD05_RS02320 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 RD05_RS02320 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal RD05_RS02320 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS02320 IPR016166 FAD-binding domain, PCMH-type RD05_RS02320 IPR012256 D-lactate dehydrogenase RD05_RS02320 IPR016167 FAD-binding, type PCMH, subdomain 1 RD05_RS02325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02325 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS02325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS02325 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS02325 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02330 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS02330 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02330 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS02330 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS02330 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02330 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02335 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02335 IPR005064 Bordetella uptake gene RD05_RS02340 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD05_RS02340 IPR002933 Peptidase M20 RD05_RS02340 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS02340 IPR011650 Peptidase M20, dimerisation domain RD05_RS02340 IPR010169 Acetylornithine deacetylase ArgE RD05_RS02350 IPR006175 YjgF/YER057c/UK114 family RD05_RS02350 IPR019897 RidA, conserved site RD05_RS02350 IPR006056 RidA family RD05_RS02350 IPR035959 RutC-like superfamily RD05_RS02360 IPR020843 Polyketide synthase, enoylreductase domain RD05_RS02360 IPR036291 NAD(P)-binding domain superfamily RD05_RS02360 IPR011032 GroES-like superfamily RD05_RS02360 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS02360 IPR014188 Acrylyl-CoA reductase AcuI RD05_RS02360 IPR013154 Alcohol dehydrogenase, N-terminal RD05_RS02365 IPR000847 Transcription regulator HTH, LysR RD05_RS02365 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS02365 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS02365 IPR005119 LysR, substrate-binding RD05_RS02370 IPR003781 CoA-binding RD05_RS02370 IPR016102 Succinyl-CoA synthetase-like RD05_RS02370 IPR036291 NAD(P)-binding domain superfamily RD05_RS02370 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS02370 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RD05_RS02370 IPR011761 ATP-grasp fold RD05_RS02375 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS02375 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS02375 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS02375 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02385 IPR005064 Bordetella uptake gene RD05_RS02385 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02390 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase RD05_RS02390 IPR036291 NAD(P)-binding domain superfamily RD05_RS02395 IPR001347 Sugar isomerase (SIS) RD05_RS02395 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS02395 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RD05_RS02395 IPR035490 GlmS/FrlB, SIS domain 2 RD05_RS02395 IPR035466 GlmS/AgaS, SIS domain 1 RD05_RS02395 IPR017932 Glutamine amidotransferase type 2 domain RD05_RS02400 IPR000485 AsnC-type HTH domain RD05_RS02400 IPR011008 Dimeric alpha-beta barrel RD05_RS02400 IPR019888 Transcription regulator AsnC-type RD05_RS02400 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS02400 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS02400 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS02405 IPR020617 Thiolase, C-terminal RD05_RS02405 IPR020613 Thiolase, conserved site RD05_RS02405 IPR020616 Thiolase, N-terminal RD05_RS02405 IPR002155 Thiolase RD05_RS02405 IPR016039 Thiolase-like RD05_RS02405 IPR020610 Thiolase, active site RD05_RS02405 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS02410 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS02410 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02410 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS02410 IPR012802 Fatty oxidation complex, alpha subunit FadJ RD05_RS02410 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS02410 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS02410 IPR036291 NAD(P)-binding domain superfamily RD05_RS02410 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD05_RS02415 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02415 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02415 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02415 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS02415 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RD05_RS02415 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS02415 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS02420 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02420 IPR005064 Bordetella uptake gene RD05_RS02425 IPR016102 Succinyl-CoA synthetase-like RD05_RS02425 IPR003781 CoA-binding RD05_RS02425 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS02425 IPR036291 NAD(P)-binding domain superfamily RD05_RS02425 IPR011761 ATP-grasp fold RD05_RS02425 IPR016181 Acyl-CoA N-acyltransferase RD05_RS02425 IPR000182 GNAT domain RD05_RS02425 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RD05_RS02440 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RD05_RS02440 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase RD05_RS02440 IPR009010 Aspartate decarboxylase-like domain superfamily RD05_RS02440 IPR006656 Molybdopterin oxidoreductase RD05_RS02440 IPR006657 Molybdopterin dinucleotide-binding domain RD05_RS02460 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RD05_RS02460 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily RD05_RS02460 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RD05_RS02460 IPR036291 NAD(P)-binding domain superfamily RD05_RS02460 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily RD05_RS02460 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RD05_RS02460 IPR018214 Glutamyl-tRNA reductase, conserved site RD05_RS02460 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RD05_RS02465 IPR000352 Peptide chain release factor class I RD05_RS02465 IPR004373 Peptide chain release factor 1 RD05_RS02465 IPR005139 Peptide chain release factor RD05_RS02470 IPR007848 Methyltransferase small domain RD05_RS02470 IPR040758 Release factor glutamine methyltransferase, N-terminal domain RD05_RS02470 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RD05_RS02470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS02470 IPR004556 Methyltransferase HemK-like RD05_RS02470 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS02475 IPR004480 Monothiol glutaredoxin-related RD05_RS02475 IPR033658 Glutaredoxin, PICOT-like RD05_RS02475 IPR036249 Thioredoxin-like superfamily RD05_RS02475 IPR014434 Monothiol glutaredoxin RD05_RS02475 IPR002109 Glutaredoxin RD05_RS02480 IPR004507 Flavin prenyltransferase UbiX-like RD05_RS02480 IPR003382 Flavoprotein RD05_RS02480 IPR036551 Flavin prenyltransferase-like RD05_RS02485 IPR042100 Bordetella uptake gene, domain 1 RD05_RS02485 IPR005064 Bordetella uptake gene RD05_RS02490 IPR015168 SsuA/THI5-like RD05_RS02495 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RD05_RS02495 IPR016166 FAD-binding domain, PCMH-type RD05_RS02495 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS02495 IPR005107 CO dehydrogenase flavoprotein, C-terminal RD05_RS02495 IPR016167 FAD-binding, type PCMH, subdomain 1 RD05_RS02495 IPR002346 Molybdopterin dehydrogenase, FAD-binding RD05_RS02495 IPR016169 FAD-binding, type PCMH, subdomain 2 RD05_RS02500 IPR036884 [2Fe-2S]-binding domain superfamily RD05_RS02500 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS02500 IPR002888 [2Fe-2S]-binding RD05_RS02500 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS02500 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS02500 IPR012675 Beta-grasp domain superfamily RD05_RS02505 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD05_RS02505 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RD05_RS02505 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD05_RS02505 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RD05_RS02525 IPR007730 Sporulation-like domain RD05_RS02525 IPR034718 Endolytic peptidoglycan transglycosylase RlpA RD05_RS02525 IPR036680 Sporulation-like domain superfamily RD05_RS02525 IPR012997 Rare lipoprotein A RD05_RS02525 IPR036908 RlpA-like domain superfamily RD05_RS02525 IPR009009 RlpA-like protein, double-psi beta-barrel domain RD05_RS02530 IPR005337 RapZ-like family RD05_RS02530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02540 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RD05_RS02540 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD05_RS02540 IPR036909 Cytochrome c-like domain superfamily RD05_RS02540 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RD05_RS02540 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD05_RS02540 IPR009056 Cytochrome c-like domain RD05_RS02545 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily RD05_RS02545 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal RD05_RS02545 IPR003755 HPr(Ser) kinase/phosphorylase RD05_RS02545 IPR011104 HPr kinase/phosphorylase, C-terminal RD05_RS02550 IPR002178 PTS EIIA type-2 domain RD05_RS02550 IPR016152 Phosphotransferase/anion transporter RD05_RS02550 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN RD05_RS02555 IPR036567 Ribosome hibernation promotion factor-like RD05_RS02555 IPR003489 Ribosome hibernation promoting factor/RaiA RD05_RS02560 IPR003593 AAA+ ATPase domain RD05_RS02560 IPR003439 ABC transporter-like RD05_RS02560 IPR030921 LPS export ABC transporter, ATP-binding protein LptB RD05_RS02560 IPR017871 ABC transporter, conserved site RD05_RS02560 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02575 IPR036412 HAD-like superfamily RD05_RS02575 IPR010023 KdsC family RD05_RS02575 IPR023214 HAD superfamily RD05_RS02580 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RD05_RS02580 IPR000644 CBS domain RD05_RS02580 IPR035474 KpsF-like, SIS domain RD05_RS02580 IPR001347 Sugar isomerase (SIS) RD05_RS02585 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS02585 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase RD05_RS02585 IPR011054 Rudiment single hybrid motif RD05_RS02585 IPR001509 NAD-dependent epimerase/dehydratase RD05_RS02585 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS02585 IPR011761 ATP-grasp fold RD05_RS02585 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD05_RS02590 IPR039423 TonB-dependent receptor-like RD05_RS02590 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS02590 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS02590 IPR010105 TonB-dependent siderophore receptor RD05_RS02590 IPR012910 TonB-dependent receptor, plug domain RD05_RS02590 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS02600 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RD05_RS02600 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS02600 IPR027424 Glucose Oxidase, domain 2 RD05_RS02600 IPR011533 Oxygen-dependent choline dehydrogenase RD05_RS02600 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RD05_RS02600 IPR012132 Glucose-methanol-choline oxidoreductase RD05_RS02620 IPR029351 GAD domain RD05_RS02620 IPR004115 GAD-like domain superfamily RD05_RS02620 IPR004524 Aspartate-tRNA ligase, type 1 RD05_RS02620 IPR012340 Nucleic acid-binding, OB-fold RD05_RS02620 IPR006195 Aminoacyl-tRNA synthetase, class II RD05_RS02620 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD05_RS02620 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RD05_RS02620 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RD05_RS02625 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RD05_RS02625 IPR005135 Endonuclease/exonuclease/phosphatase RD05_RS02630 IPR025202 Phospholipase D-like domain RD05_RS02630 IPR030872 Cardiolipin synthase B RD05_RS02630 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS02655 IPR028081 Leucine-binding protein domain RD05_RS02655 IPR000709 Leu/Ile/Val-binding protein RD05_RS02655 IPR028082 Periplasmic binding protein-like I RD05_RS02660 IPR036928 Amidase signature (AS) superfamily RD05_RS02660 IPR000120 Amidase RD05_RS02660 IPR020556 Amidase, conserved site RD05_RS02660 IPR023631 Amidase signature domain RD05_RS02660 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS02665 IPR010300 Cysteine dioxygenase type I RD05_RS02665 IPR014710 RmlC-like jelly roll fold RD05_RS02665 IPR011051 RmlC-like cupin domain superfamily RD05_RS02670 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS02670 IPR014757 Transcription regulator IclR, C-terminal RD05_RS02670 IPR029016 GAF-like domain superfamily RD05_RS02670 IPR005471 Transcription regulator IclR, N-terminal RD05_RS02670 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS02685 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS02685 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS02685 IPR012799 Fatty oxidation complex, alpha subunit FadB RD05_RS02685 IPR036291 NAD(P)-binding domain superfamily RD05_RS02685 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS02685 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD05_RS02685 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02685 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS02690 IPR007939 Copper resistance B precursor RD05_RS02695 IPR034279 Copper resistance protein, third cupredoxin domain RD05_RS02695 IPR034282 Copper resistance protein CopA, second cupredoxin domain RD05_RS02695 IPR011707 Multicopper oxidase, type 3 RD05_RS02695 IPR034284 Copper resistance protein, first cupredoxin domain RD05_RS02695 IPR008972 Cupredoxin RD05_RS02695 IPR011706 Multicopper oxidase, type 2 RD05_RS02695 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RD05_RS02695 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS02695 IPR001117 Multicopper oxidase, type 1 RD05_RS02695 IPR002355 Multicopper oxidase, copper-binding site RD05_RS02695 IPR033138 Multicopper oxidases, conserved site RD05_RS02695 IPR006376 Copper-resistance protein CopA RD05_RS02725 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS02725 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RD05_RS02725 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS02725 IPR036291 NAD(P)-binding domain superfamily RD05_RS02725 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD05_RS02725 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC RD05_RS02725 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS02730 IPR003673 CoA-transferase family III RD05_RS02730 IPR023606 CoA-transferase family III domain superfamily RD05_RS02735 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS02735 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02735 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS02735 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS02735 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS02735 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02735 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02750 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS02750 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS02750 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS02750 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02755 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS02755 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02755 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS02760 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase RD05_RS02760 IPR029056 Ribokinase-like RD05_RS02760 IPR017953 Carbohydrate kinase, predicted, conserved site RD05_RS02780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS02780 IPR014156 Nickel ABC transporter, permease subunit NikB RD05_RS02780 IPR035906 MetI-like superfamily RD05_RS02785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS02785 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS02785 IPR035906 MetI-like superfamily RD05_RS02790 IPR003593 AAA+ ATPase domain RD05_RS02790 IPR003439 ABC transporter-like RD05_RS02790 IPR017871 ABC transporter, conserved site RD05_RS02790 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS02790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02800 IPR002933 Peptidase M20 RD05_RS02800 IPR008007 Peptidase M42 RD05_RS02800 IPR011650 Peptidase M20, dimerisation domain RD05_RS02800 IPR010162 Peptidase M20B, peptidase T-like RD05_RS02800 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD05_RS02800 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS02810 IPR014017 UvrD-like DNA helicase, C-terminal RD05_RS02810 IPR013986 DExx box DNA helicase domain superfamily RD05_RS02810 IPR014016 UvrD-like helicase, ATP-binding domain RD05_RS02810 IPR034739 UvrD/AddA helicase, N-terminal RD05_RS02810 IPR000212 DNA helicase, UvrD/REP type RD05_RS02810 IPR005752 ATP-dependent DNA helicase Rep RD05_RS02810 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02815 IPR011545 DEAD/DEAH box helicase domain RD05_RS02815 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS02815 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain RD05_RS02815 IPR001650 Helicase, C-terminal RD05_RS02815 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02815 IPR041236 Primosomal protein N, C-terminal domain RD05_RS02815 IPR005259 Primosomal protein N' RD05_RS02815 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily RD05_RS02815 IPR041222 Primosomal protein N', 3' DNA-binding domain RD05_RS02820 IPR006361 Uroporphyrinogen decarboxylase HemE RD05_RS02820 IPR038071 UROD/MetE-like superfamily RD05_RS02820 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RD05_RS02830 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily RD05_RS02830 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal RD05_RS02830 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit RD05_RS02830 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal RD05_RS02835 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS02835 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RD05_RS02835 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily RD05_RS02835 IPR005722 ATP synthase, F1 complex, beta subunit RD05_RS02835 IPR003593 AAA+ ATPase domain RD05_RS02835 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD05_RS02835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02835 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal RD05_RS02840 IPR000131 ATP synthase, F1 complex, gamma subunit RD05_RS02840 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site RD05_RS02840 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily RD05_RS02845 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily RD05_RS02845 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD05_RS02845 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS02845 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02845 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily RD05_RS02845 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain RD05_RS02845 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RD05_RS02845 IPR005294 ATP synthase, F1 complex, alpha subunit RD05_RS02845 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RD05_RS02845 IPR000793 ATP synthase, alpha subunit, C-terminal RD05_RS02850 IPR000711 ATPase, OSCP/delta subunit RD05_RS02850 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily RD05_RS02855 IPR005864 ATP synthase, F0 complex, subunit b, bacterial RD05_RS02855 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast RD05_RS02855 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily RD05_RS02860 IPR035921 F/V-ATP synthase subunit C superfamily RD05_RS02860 IPR002379 V-ATPase proteolipid subunit C-like domain RD05_RS02860 IPR038662 F1F0 ATP synthase subunit C superfamily RD05_RS02860 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site RD05_RS02860 IPR000454 ATP synthase, F0 complex, subunit C RD05_RS02860 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast RD05_RS02865 IPR035908 ATP synthase, F0 complex, subunit A superfamily RD05_RS02865 IPR023011 ATP synthase, F0 complex, subunit A, active site RD05_RS02865 IPR000568 ATP synthase, F0 complex, subunit A RD05_RS02890 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS02890 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS02890 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS02890 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS02895 IPR011782 Peptidase S1C, Do RD05_RS02895 IPR036034 PDZ superfamily RD05_RS02895 IPR041489 PDZ domain 6 RD05_RS02895 IPR001478 PDZ domain RD05_RS02895 IPR009003 Peptidase S1, PA clan RD05_RS02895 IPR001940 Peptidase S1C RD05_RS02900 IPR012336 Thioredoxin-like fold RD05_RS02900 IPR023753 FAD/NAD(P)-binding domain RD05_RS02900 IPR002109 Glutaredoxin RD05_RS02900 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD05_RS02900 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS02900 IPR036249 Thioredoxin-like superfamily RD05_RS02900 IPR012081 Alkyl hydroperoxide reductase subunit F RD05_RS02910 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase RD05_RS02910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS02910 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RD05_RS02920 IPR006236 D-3-phosphoglycerate dehydrogenase RD05_RS02920 IPR036291 NAD(P)-binding domain superfamily RD05_RS02920 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS02920 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD05_RS02920 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD05_RS02920 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD05_RS02920 IPR029009 Allosteric substrate binding domain superfamily RD05_RS02920 IPR002912 ACT domain RD05_RS02925 IPR012336 Thioredoxin-like fold RD05_RS02925 IPR036249 Thioredoxin-like superfamily RD05_RS02925 IPR017937 Thioredoxin, conserved site RD05_RS02925 IPR033954 Disulphide bond isomerase, DsbC/G RD05_RS02925 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RD05_RS02930 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS02930 IPR002938 FAD-binding domain RD05_RS02930 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 RD05_RS02930 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RD05_RS02935 IPR036908 RlpA-like domain superfamily RD05_RS02935 IPR010611 3D domain RD05_RS02935 IPR005300 Lytic transglycosylase MltA, domain B RD05_RS02935 IPR034654 MltA, 3D domain RD05_RS02935 IPR026044 Membrane-bound lytic murein transglycosylase A RD05_RS02940 IPR007474 ApaG domain RD05_RS02940 IPR036767 ApaG domain superfamily RD05_RS02940 IPR023065 Uncharacterised protein family ApaG RD05_RS02945 IPR013785 Aldolase-type TIM barrel RD05_RS02945 IPR026019 Ribulose-phosphate 3-epimerase RD05_RS02945 IPR000056 Ribulose-phosphate 3-epimerase-like RD05_RS02945 IPR011060 Ribulose-phosphate binding barrel RD05_RS02950 IPR041492 Haloacid dehalogenase-like hydrolase RD05_RS02950 IPR023214 HAD superfamily RD05_RS02950 IPR036412 HAD-like superfamily RD05_RS02950 IPR006439 HAD hydrolase, subfamily IA RD05_RS02950 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RD05_RS02950 IPR037512 Phosphoglycolate phosphatase, prokaryotic RD05_RS02950 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RD05_RS02955 IPR005801 ADC synthase RD05_RS02955 IPR019999 Anthranilate synthase component I-like RD05_RS02955 IPR005256 Anthranilate synthase component I, PabB-like RD05_RS02955 IPR015890 Chorismate-utilising enzyme, C-terminal RD05_RS02955 IPR006805 Anthranilate synthase component I, N-terminal RD05_RS02960 IPR017926 Glutamine amidotransferase RD05_RS02960 IPR029062 Class I glutamine amidotransferase-like RD05_RS02960 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RD05_RS02965 IPR017459 Glycosyl transferase family 3, N-terminal domain RD05_RS02965 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily RD05_RS02965 IPR000312 Glycosyl transferase, family 3 RD05_RS02965 IPR005940 Anthranilate phosphoribosyl transferase RD05_RS02965 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily RD05_RS02970 IPR013785 Aldolase-type TIM barrel RD05_RS02970 IPR013798 Indole-3-glycerol phosphate synthase RD05_RS02970 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RD05_RS02970 IPR011060 Ribulose-phosphate binding barrel RD05_RS02995 IPR034184 Putative acyl-CoA dehydrogenase AidB RD05_RS02995 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS02995 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02995 IPR041504 Adaptive response protein AidB, N-terminal RD05_RS02995 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS02995 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02995 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS03000 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03000 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain RD05_RS03000 IPR000847 Transcription regulator HTH, LysR RD05_RS03000 IPR005119 LysR, substrate-binding RD05_RS03000 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS03005 IPR002376 Formyl transferase, N-terminal RD05_RS03005 IPR036477 Formyl transferase, N-terminal domain superfamily RD05_RS03005 IPR004810 Formyltetrahydrofolate deformylase RD05_RS03005 IPR002912 ACT domain RD05_RS03005 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain RD05_RS03015 IPR002563 Flavin reductase like domain RD05_RS03015 IPR012349 FMN-binding split barrel RD05_RS03015 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03015 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS03020 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RD05_RS03020 IPR012349 FMN-binding split barrel RD05_RS03020 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RD05_RS03020 IPR000659 Pyridoxamine 5'-phosphate oxidase RD05_RS03020 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RD05_RS03030 IPR005829 Sugar transporter, conserved site RD05_RS03030 IPR036259 MFS transporter superfamily RD05_RS03030 IPR020846 Major facilitator superfamily domain RD05_RS03030 IPR004734 Multidrug resistance protein RD05_RS03030 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RD05_RS03030 IPR011701 Major facilitator superfamily RD05_RS03035 IPR035985 Ubiquitin-activating enzyme RD05_RS03035 IPR000594 THIF-type NAD/FAD binding fold RD05_RS03040 IPR000524 Transcription regulator HTH, GntR RD05_RS03040 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RD05_RS03040 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03040 IPR011663 UbiC transcription regulator-associated RD05_RS03040 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS03045 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS03045 IPR020845 AMP-binding, conserved site RD05_RS03045 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS03045 IPR010192 2-succinylbenzoate--CoA ligase RD05_RS03045 IPR000873 AMP-dependent synthetase/ligase RD05_RS03050 IPR005064 Bordetella uptake gene RD05_RS03050 IPR042100 Bordetella uptake gene, domain 1 RD05_RS03055 IPR036291 NAD(P)-binding domain superfamily RD05_RS03055 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS03065 IPR036038 Aminotransferase-like, PLP-dependent enzymes RD05_RS03065 IPR001544 Aminotransferase class IV RD05_RS03070 IPR005802 Aminodeoxychorismate synthase, component I RD05_RS03070 IPR019999 Anthranilate synthase component I-like RD05_RS03070 IPR006805 Anthranilate synthase component I, N-terminal RD05_RS03070 IPR015890 Chorismate-utilising enzyme, C-terminal RD05_RS03070 IPR005801 ADC synthase RD05_RS03075 IPR041552 UvrA DNA-binding domain RD05_RS03075 IPR003593 AAA+ ATPase domain RD05_RS03075 IPR003439 ABC transporter-like RD05_RS03075 IPR017871 ABC transporter, conserved site RD05_RS03075 IPR041102 UvrA, interaction domain RD05_RS03075 IPR004602 UvrABC system subunit A RD05_RS03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03085 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS03085 IPR000847 Transcription regulator HTH, LysR RD05_RS03085 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03085 IPR005119 LysR, substrate-binding RD05_RS03090 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS03090 IPR001173 Glycosyltransferase 2-like RD05_RS03095 IPR023765 Solute-binding protein family 5, conserved site RD05_RS03095 IPR000914 Solute-binding protein family 5 domain RD05_RS03095 IPR039424 Solute-binding protein family 5 RD05_RS03095 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS03100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS03100 IPR035906 MetI-like superfamily RD05_RS03110 IPR032781 ABC-transporter extension domain RD05_RS03110 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03110 IPR022374 Energy-dependent translational throttle protein EttA RD05_RS03110 IPR003593 AAA+ ATPase domain RD05_RS03110 IPR017871 ABC transporter, conserved site RD05_RS03110 IPR003439 ABC transporter-like RD05_RS03130 IPR005527 Cell division topological specificity factor MinE RD05_RS03130 IPR036707 Cell division topological specificity factor MinE superfamily RD05_RS03135 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03135 IPR025501 ATP binding protein MinD RD05_RS03135 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RD05_RS03135 IPR010223 ATP binding protein MinD, bacterial-type RD05_RS03140 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal RD05_RS03140 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily RD05_RS03140 IPR013033 Septum formation inhibitor MinC RD05_RS03140 IPR007874 Septum formation inhibitor MinC, N-terminal RD05_RS03140 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily RD05_RS03140 IPR005526 Septum formation inhibitor MinC, C-terminal RD05_RS03145 IPR004514 Glutamine-tRNA synthetase RD05_RS03145 IPR022861 Glutamine-tRNA ligase, bacterial RD05_RS03145 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RD05_RS03145 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal RD05_RS03145 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily RD05_RS03145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS03145 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS03145 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RD05_RS03145 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily RD05_RS03145 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain RD05_RS03150 IPR002585 Cytochrome ubiquinol oxidase subunit 1 RD05_RS03160 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS03160 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS03160 IPR005467 Histidine kinase domain RD05_RS03160 IPR038318 KdpD, transmembrane domain superfamily RD05_RS03160 IPR025201 Sensor protein KdpD, transmembrane domain RD05_RS03160 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal RD05_RS03160 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS03165 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS03165 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03165 IPR001789 Signal transduction response regulator, receiver domain RD05_RS03165 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS03165 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS03165 IPR011006 CheY-like superfamily RD05_RS03180 IPR042100 Bordetella uptake gene, domain 1 RD05_RS03180 IPR005064 Bordetella uptake gene RD05_RS03185 IPR029024 TerB-like RD05_RS03185 IPR007486 Inner membrane protein YebE RD05_RS03200 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS03200 IPR036291 NAD(P)-binding domain superfamily RD05_RS03200 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RD05_RS03205 IPR008258 Transglycosylase SLT domain 1 RD05_RS03205 IPR018392 LysM domain RD05_RS03205 IPR036779 LysM domain superfamily RD05_RS03205 IPR023346 Lysozyme-like domain superfamily RD05_RS03205 IPR000189 Prokaryotic transglycosylase, active site RD05_RS03210 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain RD05_RS03210 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain RD05_RS03210 IPR017782 Hydroxyacylglutathione hydrolase RD05_RS03210 IPR001279 Metallo-beta-lactamase RD05_RS03210 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RD05_RS03215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS03215 IPR026669 Arsenite methyltransferase-like RD05_RS03215 IPR013216 Methyltransferase type 11 RD05_RS03220 IPR012337 Ribonuclease H-like superfamily RD05_RS03220 IPR022892 Ribonuclease HI RD05_RS03220 IPR036397 Ribonuclease H superfamily RD05_RS03220 IPR002156 Ribonuclease H domain RD05_RS03265 IPR002539 MaoC-like dehydratase domain RD05_RS03265 IPR029069 HotDog domain superfamily RD05_RS03270 IPR020616 Thiolase, N-terminal RD05_RS03270 IPR020613 Thiolase, conserved site RD05_RS03270 IPR016039 Thiolase-like RD05_RS03270 IPR020610 Thiolase, active site RD05_RS03270 IPR002155 Thiolase RD05_RS03270 IPR012806 Acetyl-CoA C-acyltransferase FadI RD05_RS03270 IPR020617 Thiolase, C-terminal RD05_RS03280 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS03280 IPR022852 Carnitinyl-CoA dehydratase RD05_RS03280 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS03280 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS03280 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS03285 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS03285 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS03285 IPR036291 NAD(P)-binding domain superfamily RD05_RS03295 IPR017871 ABC transporter, conserved site RD05_RS03295 IPR003439 ABC transporter-like RD05_RS03295 IPR003593 AAA+ ATPase domain RD05_RS03295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03295 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS03300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03300 IPR003593 AAA+ ATPase domain RD05_RS03300 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS03300 IPR003439 ABC transporter-like RD05_RS03300 IPR017871 ABC transporter, conserved site RD05_RS03305 IPR001851 ABC transporter, permease RD05_RS03315 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS03315 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS03315 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS03315 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS03315 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS03315 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS03315 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS03320 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS03320 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RD05_RS03320 IPR013572 Transcription regulator MAATS, C-terminal RD05_RS03320 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS03320 IPR009057 Homeobox-like domain superfamily RD05_RS03325 IPR011880 Phenylacetate-CoA ligase RD05_RS03325 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS03325 IPR000873 AMP-dependent synthetase/ligase RD05_RS03325 IPR028154 AMP-dependent ligase, C-terminal RD05_RS03330 IPR023606 CoA-transferase family III domain superfamily RD05_RS03330 IPR003673 CoA-transferase family III RD05_RS03335 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS03335 IPR036291 NAD(P)-binding domain superfamily RD05_RS03350 IPR036465 von Willebrand factor A-like domain superfamily RD05_RS03350 IPR006698 Uncharacterised protein family UPF0229 RD05_RS03355 IPR007390 Sporulation stage V, protein R RD05_RS03370 IPR042100 Bordetella uptake gene, domain 1 RD05_RS03370 IPR005064 Bordetella uptake gene RD05_RS03375 IPR029017 Enolase-like, N-terminal RD05_RS03375 IPR022665 Methylaspartate ammonia-lyase, N-terminal RD05_RS03375 IPR022662 Methylaspartate ammonia-lyase, C-terminal RD05_RS03375 IPR006395 Methylaspartate ammonia-lyase RD05_RS03375 IPR036849 Enolase-like, C-terminal domain superfamily RD05_RS03380 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RD05_RS03380 IPR011663 UbiC transcription regulator-associated RD05_RS03380 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03380 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS03380 IPR000524 Transcription regulator HTH, GntR RD05_RS03395 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS03395 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS03395 IPR001055 Adrenodoxin RD05_RS03395 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria RD05_RS03395 IPR012675 Beta-grasp domain superfamily RD05_RS03395 IPR018298 Adrenodoxin, iron-sulphur binding site RD05_RS03400 IPR000551 MerR-type HTH domain RD05_RS03400 IPR015358 Transcription regulator MerR, DNA binding RD05_RS03400 IPR009061 Putative DNA-binding domain superfamily RD05_RS03400 IPR011789 Cu(I)-responsive transcriptional regulator RD05_RS03405 IPR002669 Urease accessory protein UreD RD05_RS03410 IPR012010 Urease, gamma subunit RD05_RS03410 IPR002026 Urease, gamma/gamma-beta subunit RD05_RS03410 IPR036463 Urease, gamma subunit superfamily RD05_RS03415 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RD05_RS03420 IPR002019 Urease, beta subunit RD05_RS03420 IPR036461 Urease, beta subunit superfamily RD05_RS03425 IPR006680 Amidohydrolase-related RD05_RS03425 IPR011059 Metal-dependent hydrolase, composite domain superfamily RD05_RS03425 IPR032466 Metal-dependent hydrolase RD05_RS03425 IPR017950 Urease active site RD05_RS03425 IPR005848 Urease, alpha subunit RD05_RS03425 IPR017951 Urease alpha subunit, C-terminal RD05_RS03425 IPR029754 Urease nickel binding site RD05_RS03425 IPR011612 Urease alpha-subunit, N-terminal domain RD05_RS03430 IPR007864 Urease accessory protein UreE, C-terminal domain RD05_RS03430 IPR036118 UreE urease accessory, N-terminal domain superfamily RD05_RS03430 IPR004029 UreE urease accessory, N-terminal RD05_RS03430 IPR036675 UreE, C-terminal domain superfamily RD05_RS03430 IPR012406 Urease accessory protein UreE RD05_RS03435 IPR002639 Urease accessory protein UreF RD05_RS03435 IPR038277 UreF domain superfamily RD05_RS03440 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RD05_RS03440 IPR004400 Urease accessory protein UreG RD05_RS03440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03450 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD05_RS03450 IPR009197 Microcystin LR degradation protein MlrC RD05_RS03450 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD05_RS03460 IPR035906 MetI-like superfamily RD05_RS03460 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS03465 IPR035906 MetI-like superfamily RD05_RS03465 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS03470 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS03470 IPR023765 Solute-binding protein family 5, conserved site RD05_RS03470 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS03470 IPR000914 Solute-binding protein family 5 domain RD05_RS03470 IPR039424 Solute-binding protein family 5 RD05_RS03475 IPR015590 Aldehyde dehydrogenase domain RD05_RS03475 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS03475 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS03475 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD05_RS03475 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS03475 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS03480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS03480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS03480 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS03480 IPR005814 Aminotransferase class-III RD05_RS03485 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS03485 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS03485 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS03485 IPR000524 Transcription regulator HTH, GntR RD05_RS03485 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03485 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS03485 IPR004839 Aminotransferase, class I/classII RD05_RS03490 IPR024072 Dihydrofolate reductase-like domain superfamily RD05_RS03490 IPR017925 Dihydrofolate reductase conserved site RD05_RS03490 IPR001796 Dihydrofolate reductase domain RD05_RS03490 IPR012259 Dihydrofolate reductase RD05_RS03495 IPR020940 Thymidylate synthase, active site RD05_RS03495 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily RD05_RS03495 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RD05_RS03495 IPR000398 Thymidylate synthase RD05_RS03505 IPR011566 Ubiquinone biosynthesis protein Coq7 RD05_RS03505 IPR012347 Ferritin-like RD05_RS03505 IPR009078 Ferritin-like superfamily RD05_RS03510 IPR000715 Glycosyl transferase, family 4 RD05_RS03515 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS03515 IPR036291 NAD(P)-binding domain superfamily RD05_RS03515 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD05_RS03515 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD05_RS03515 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RD05_RS03515 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD05_RS03515 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD05_RS03515 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RD05_RS03520 IPR001509 NAD-dependent epimerase/dehydratase RD05_RS03520 IPR036291 NAD(P)-binding domain superfamily RD05_RS03525 IPR004268 Peptidoglycan biosynthesis protein MurJ RD05_RS03530 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RD05_RS03530 IPR001296 Glycosyl transferase, family 1 RD05_RS03535 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS03535 IPR017932 Glutamine amidotransferase type 2 domain RD05_RS03535 IPR033738 Asparagine synthase, N-terminal domain RD05_RS03535 IPR001962 Asparagine synthase RD05_RS03535 IPR006426 Asparagine synthase, glutamine-hydrolyzing RD05_RS03540 IPR001296 Glycosyl transferase, family 1 RD05_RS03540 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RD05_RS03550 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RD05_RS03550 IPR001296 Glycosyl transferase, family 1 RD05_RS03555 IPR001672 Phosphoglucose isomerase (PGI) RD05_RS03555 IPR023096 Phosphoglucose isomerase, C-terminal RD05_RS03555 IPR018189 Phosphoglucose isomerase, conserved site RD05_RS03555 IPR035476 Phosphoglucose isomerase, SIS domain 1 RD05_RS03555 IPR035482 Phosphoglucose isomerase, SIS domain 2 RD05_RS03560 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD05_RS03560 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD05_RS03560 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RD05_RS03560 IPR016066 Alpha-D-phosphohexomutase, conserved site RD05_RS03560 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD05_RS03560 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD05_RS03560 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD05_RS03560 IPR005841 Alpha-D-phosphohexomutase superfamily RD05_RS03570 IPR016166 FAD-binding domain, PCMH-type RD05_RS03570 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS03570 IPR006094 FAD linked oxidase, N-terminal RD05_RS03570 IPR004490 Glycolate oxidase subunit GlcD RD05_RS03570 IPR004113 FAD-linked oxidase, C-terminal RD05_RS03570 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS03570 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS03575 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03575 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS03575 IPR011006 CheY-like superfamily RD05_RS03575 IPR001789 Signal transduction response regulator, receiver domain RD05_RS03575 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS03580 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS03580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS03580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS03580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS03580 IPR003660 HAMP domain RD05_RS03580 IPR013727 Two-component sensor kinase, N-terminal RD05_RS03580 IPR005467 Histidine kinase domain RD05_RS03580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS03585 IPR012160 Lipoteichoic acid synthase-like RD05_RS03585 IPR017850 Alkaline-phosphatase-like, core domain superfamily RD05_RS03585 IPR000917 Sulfatase, N-terminal RD05_RS03595 IPR022950 Homogentisate 1,2-dioxygenase, bacterial RD05_RS03595 IPR005708 Homogentisate 1,2-dioxygenase RD05_RS03595 IPR014710 RmlC-like jelly roll fold RD05_RS03595 IPR011051 RmlC-like cupin domain superfamily RD05_RS03600 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS03600 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03600 IPR005119 LysR, substrate-binding RD05_RS03600 IPR000847 Transcription regulator HTH, LysR RD05_RS03610 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS03610 IPR002938 FAD-binding domain RD05_RS03620 IPR010979 Ribosomal protein S13-like, H2TH RD05_RS03620 IPR035937 MutM-like, N-terminal RD05_RS03620 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RD05_RS03620 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RD05_RS03620 IPR020629 Formamidopyrimidine-DNA glycosylase RD05_RS03620 IPR010663 Zinc finger, FPG/IleRS-type RD05_RS03620 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain RD05_RS03620 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type RD05_RS03625 IPR013026 Tetratricopeptide repeat-containing domain RD05_RS03625 IPR019734 Tetratricopeptide repeat RD05_RS03625 IPR011990 Tetratricopeptide-like helical domain superfamily RD05_RS03630 IPR029046 Lipoprotein localisation LolA/LolB/LppX RD05_RS03630 IPR004565 Outer membrane lipoprotein LolB RD05_RS03635 IPR013750 GHMP kinase, C-terminal domain RD05_RS03635 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS03635 IPR036554 GHMP kinase, C-terminal domain superfamily RD05_RS03635 IPR006204 GHMP kinase N-terminal domain RD05_RS03635 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS03635 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RD05_RS03645 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RD05_RS03645 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type RD05_RS03645 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RD05_RS03645 IPR005946 Ribose-phosphate pyrophosphokinase RD05_RS03645 IPR000836 Phosphoribosyltransferase domain RD05_RS03645 IPR029057 Phosphoribosyltransferase-like RD05_RS03650 IPR020055 Ribosomal protein L25, short-form RD05_RS03650 IPR001021 Ribosomal protein L25, long-form RD05_RS03650 IPR037121 Ribosomal protein L25, C-terminal RD05_RS03650 IPR020057 Ribosomal protein L25, beta domain RD05_RS03650 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily RD05_RS03650 IPR029751 Ribosomal protein L25 RD05_RS03650 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal RD05_RS03655 IPR001328 Peptidyl-tRNA hydrolase RD05_RS03655 IPR018171 Peptidyl-tRNA hydrolase, conserved site RD05_RS03655 IPR036416 Peptidyl-tRNA hydrolase superfamily RD05_RS03665 IPR012675 Beta-grasp domain superfamily RD05_RS03665 IPR004095 TGS RD05_RS03665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03665 IPR006073 GTP binding domain RD05_RS03665 IPR031167 OBG-type guanine nucleotide-binding (G) domain RD05_RS03665 IPR023192 TGS-like domain superfamily RD05_RS03665 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RD05_RS03665 IPR013029 YchF, C-terminal domain RD05_RS03665 IPR041706 YchF, N-terminal RD05_RS03665 IPR012676 TGS-like RD05_RS03670 IPR025166 Integrase, DNA-binding domain RD05_RS03670 IPR038488 Integrase, DNA-binding domain superfamily RD05_RS03670 IPR002104 Integrase, catalytic domain RD05_RS03670 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS03670 IPR010998 Integrase/recombinase, N-terminal RD05_RS03670 IPR013762 Integrase-like, catalytic domain superfamily RD05_RS03685 IPR002941 DNA methylase N-4/N-6 RD05_RS03685 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS03685 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class RD05_RS03685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS03690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03690 IPR041685 AAA domain, group 15 RD05_RS03690 IPR042174 DNA-binding RecF, domain 2 RD05_RS03690 IPR018078 DNA-binding, RecF, conserved site RD05_RS03690 IPR001238 DNA-binding, RecF RD05_RS03715 IPR034739 UvrD/AddA helicase, N-terminal RD05_RS03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03715 IPR000212 DNA helicase, UvrD/REP type RD05_RS03715 IPR014017 UvrD-like DNA helicase, C-terminal RD05_RS03715 IPR013986 DExx box DNA helicase domain superfamily RD05_RS03715 IPR014016 UvrD-like helicase, ATP-binding domain RD05_RS03730 IPR006315 Outer membrane autotransporter barrel RD05_RS03730 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS03730 IPR013425 Autotransporter-associated beta strand repeat RD05_RS03730 IPR011050 Pectin lyase fold/virulence factor RD05_RS03730 IPR005546 Autotransporter beta-domain RD05_RS03730 IPR036709 Autotransporter beta-domain superfamily RD05_RS03740 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03740 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS03740 IPR001789 Signal transduction response regulator, receiver domain RD05_RS03740 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS03740 IPR011006 CheY-like superfamily RD05_RS03755 IPR041474 HTH-type transcriptional repressor NicS, C-terminal RD05_RS03755 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS03755 IPR009057 Homeobox-like domain superfamily RD05_RS03755 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RD05_RS03780 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS03780 IPR006076 FAD dependent oxidoreductase RD05_RS03790 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS03790 IPR000101 Gamma-glutamyltranspeptidase RD05_RS03795 IPR005064 Bordetella uptake gene RD05_RS03795 IPR042100 Bordetella uptake gene, domain 1 RD05_RS03800 IPR005950 Molybdate ABC transporter, substrate-binding protein RD05_RS03805 IPR001123 Amino acid exporter protein, LeuE-type RD05_RS03850 IPR029058 Alpha/Beta hydrolase fold RD05_RS03850 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS03850 IPR023489 Haloalkane dehalogenase, subfamily 1 RD05_RS03850 IPR000639 Epoxide hydrolase-like RD05_RS03855 IPR005950 Molybdate ABC transporter, substrate-binding protein RD05_RS03860 IPR011867 Molybdate ABC transporter, permease protein RD05_RS03860 IPR035906 MetI-like superfamily RD05_RS03860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS03865 IPR003593 AAA+ ATPase domain RD05_RS03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03865 IPR005116 Transport-associated OB, type 1 RD05_RS03865 IPR003439 ABC transporter-like RD05_RS03865 IPR004606 Molybdenum-pterin binding RD05_RS03865 IPR011868 Molybdate ABC transporter, ATP-binding protein RD05_RS03865 IPR017871 ABC transporter, conserved site RD05_RS03865 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS03865 IPR015852 ABC transporter, molybdenum import, ModC RD05_RS03870 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS03870 IPR025202 Phospholipase D-like domain RD05_RS03870 IPR030871 Cardiolipin synthase C RD05_RS03880 IPR036895 Uracil-DNA glycosylase-like domain superfamily RD05_RS03880 IPR002043 Uracil-DNA glycosylase family 1 RD05_RS03880 IPR018085 Uracil-DNA glycosylase, active site RD05_RS03880 IPR005122 Uracil-DNA glycosylase-like RD05_RS03885 IPR028622 ATP-dependent RNA helicase RhlE RD05_RS03885 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS03885 IPR001650 Helicase, C-terminal RD05_RS03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03885 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RD05_RS03885 IPR011545 DEAD/DEAH box helicase domain RD05_RS03885 IPR014014 RNA helicase, DEAD-box type, Q motif RD05_RS03895 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RD05_RS03895 IPR002646 Poly A polymerase, head domain RD05_RS03895 IPR012006 tRNA nucleotidyltransferase, proteobacteria RD05_RS03900 IPR000189 Prokaryotic transglycosylase, active site RD05_RS03900 IPR008939 Lytic transglycosylase, superhelical U-shaped RD05_RS03900 IPR012289 Lytic transglycosylase, superhelical linker RD05_RS03900 IPR008258 Transglycosylase SLT domain 1 RD05_RS03900 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily RD05_RS03900 IPR023346 Lysozyme-like domain superfamily RD05_RS03910 IPR005829 Sugar transporter, conserved site RD05_RS03910 IPR004736 MFS transporter, metabolite:H symporter RD05_RS03910 IPR036259 MFS transporter superfamily RD05_RS03910 IPR005828 Major facilitator, sugar transporter-like RD05_RS03910 IPR020846 Major facilitator superfamily domain RD05_RS03910 IPR011701 Major facilitator superfamily RD05_RS03915 IPR023801 Histone deacetylase domain RD05_RS03915 IPR037138 Histone deacetylase domain superfamily RD05_RS03915 IPR000286 Histone deacetylase family RD05_RS03915 IPR023696 Ureohydrolase domain superfamily RD05_RS03920 IPR005119 LysR, substrate-binding RD05_RS03920 IPR000847 Transcription regulator HTH, LysR RD05_RS03920 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS03920 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS03930 IPR029041 FAD-linked oxidoreductase-like RD05_RS03930 IPR004620 5,10-methylenetetrahydrofolate reductase RD05_RS03930 IPR003171 Methylenetetrahydrofolate reductase RD05_RS03935 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV RD05_RS03940 IPR042172 Adenosylhomocysteinase-like superfamily RD05_RS03940 IPR000043 Adenosylhomocysteinase-like RD05_RS03940 IPR036291 NAD(P)-binding domain superfamily RD05_RS03940 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD05_RS03940 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site RD05_RS03945 IPR001296 Glycosyl transferase, family 1 RD05_RS03945 IPR017814 Mycothiol biosynthesis protein, MshA RD05_RS03945 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RD05_RS03955 IPR002133 S-adenosylmethionine synthetase RD05_RS03955 IPR022631 S-adenosylmethionine synthetase, conserved site RD05_RS03955 IPR022630 S-adenosylmethionine synthetase, C-terminal RD05_RS03955 IPR022629 S-adenosylmethionine synthetase, central domain RD05_RS03955 IPR022636 S-adenosylmethionine synthetase superfamily RD05_RS03955 IPR022628 S-adenosylmethionine synthetase, N-terminal RD05_RS03965 IPR004960 Bacterial lipid A biosynthesis acyltransferase RD05_RS03965 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP RD05_RS03965 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase RD05_RS03970 IPR018510 Diaminopimelate epimerase, active site RD05_RS03970 IPR001653 Diaminopimelate epimerase, DapF RD05_RS03980 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS03980 IPR013762 Integrase-like, catalytic domain superfamily RD05_RS03980 IPR002104 Integrase, catalytic domain RD05_RS03980 IPR004107 Integrase, SAM-like, N-terminal RD05_RS03980 IPR010998 Integrase/recombinase, N-terminal RD05_RS03980 IPR023009 Tyrosine recombinase XerC/XerD RD05_RS03980 IPR011931 Tyrosine recombinase XerC RD05_RS03985 IPR012910 TonB-dependent receptor, plug domain RD05_RS03985 IPR039426 Vitamin B12 transporter BtuB-like RD05_RS03985 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS03985 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS03990 IPR011541 Nickel/cobalt transporter, high-affinity RD05_RS04000 IPR006127 Periplasmic solute binding protein, ZnuA-like RD05_RS04000 IPR006128 Adhesion lipoprotein RD05_RS04000 IPR006129 Adhesin B RD05_RS04005 IPR037294 ABC transporter, BtuC-like RD05_RS04005 IPR001626 ABC transporter, TroCD-like RD05_RS04010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04010 IPR017871 ABC transporter, conserved site RD05_RS04010 IPR003439 ABC transporter-like RD05_RS04010 IPR003593 AAA+ ATPase domain RD05_RS04020 IPR002481 Ferric-uptake regulator RD05_RS04020 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04020 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04025 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RD05_RS04025 IPR036627 CobW-like, C-terminal domain superfamily RD05_RS04025 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RD05_RS04025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04030 IPR012784 RNA polymerase-binding transcription factor DksA RD05_RS04030 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RD05_RS04030 IPR000962 Zinc finger, DksA/TraR C4-type RD05_RS04030 IPR037187 DksA, N-terminal domain superfamily RD05_RS04035 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS04035 IPR001353 Proteasome, subunit alpha/beta RD05_RS04035 IPR023333 Proteasome B-type subunit RD05_RS04035 IPR022281 ATP-dependent protease, HslV subunit RD05_RS04040 IPR003593 AAA+ ATPase domain RD05_RS04040 IPR019489 Clp ATPase, C-terminal RD05_RS04040 IPR004491 Heat shock protein HslU RD05_RS04040 IPR003959 ATPase, AAA-type, core RD05_RS04040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04050 IPR036451 Cobalamin adenosyltransferase-like superfamily RD05_RS04050 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RD05_RS04050 IPR016030 Cobalamin adenosyltransferase-like RD05_RS04065 IPR023048 NADH-azoreductase, FMN-dependent RD05_RS04065 IPR029039 Flavoprotein-like superfamily RD05_RS04065 IPR003680 Flavodoxin-like fold RD05_RS04070 IPR036291 NAD(P)-binding domain superfamily RD05_RS04070 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RD05_RS04070 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS04070 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS04070 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD05_RS04070 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS04070 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD05_RS04075 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS04080 IPR002823 Protein of unknown function DUF112, transmembrane RD05_RS04125 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt RD05_RS04130 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RD05_RS04130 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RD05_RS04130 IPR004404 Dihydroxy-acid dehydratase RD05_RS04130 IPR042096 Dihydroxy-acid dehydratase, C-terminal RD05_RS04130 IPR037237 IlvD/EDD, N-terminal domain RD05_RS04135 IPR036909 Cytochrome c-like domain superfamily RD05_RS04135 IPR002324 Cytochrome c, class ID RD05_RS04135 IPR009056 Cytochrome c-like domain RD05_RS04140 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily RD05_RS04140 IPR002569 Peptide methionine sulphoxide reductase MsrA RD05_RS04145 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal RD05_RS04145 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal RD05_RS04145 IPR005956 4-hydroxyphenylpyruvate dioxygenase RD05_RS04145 IPR037523 Vicinal oxygen chelate (VOC) domain RD05_RS04145 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS04145 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS04150 IPR011991 ArsR-like helix-turn-helix domain RD05_RS04150 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS04150 IPR019888 Transcription regulator AsnC-type RD05_RS04150 IPR000485 AsnC-type HTH domain RD05_RS04150 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04150 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04150 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS04150 IPR011008 Dimeric alpha-beta barrel RD05_RS04190 IPR017439 Amidohydrolase RD05_RS04190 IPR002933 Peptidase M20 RD05_RS04190 IPR011650 Peptidase M20, dimerisation domain RD05_RS04190 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS04195 IPR004721 Dihydroorotase homodimeric type RD05_RS04195 IPR006680 Amidohydrolase-related RD05_RS04195 IPR002195 Dihydroorotase, conserved site RD05_RS04195 IPR032466 Metal-dependent hydrolase RD05_RS04200 IPR017871 ABC transporter, conserved site RD05_RS04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04200 IPR032524 ABC transporter Uup, C-terminal RD05_RS04200 IPR032781 ABC-transporter extension domain RD05_RS04200 IPR003439 ABC transporter-like RD05_RS04200 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RD05_RS04200 IPR003593 AAA+ ATPase domain RD05_RS04210 IPR037914 SpoVT-AbrB domain superfamily RD05_RS04210 IPR007159 SpoVT-AbrB domain RD05_RS04210 IPR038619 MraZ superfamily RD05_RS04210 IPR035642 MraZ, N-terminal RD05_RS04210 IPR003444 Transcriptional regulator MraZ RD05_RS04210 IPR035644 MraZ, C-terminal RD05_RS04210 IPR020603 MraZ domain RD05_RS04215 IPR002903 Ribosomal RNA small subunit methyltransferase H RD05_RS04215 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily RD05_RS04215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS04220 IPR011922 Cell division protein FtsL RD05_RS04225 IPR036138 Penicillin-binding protein, dimerisation domain superfamily RD05_RS04225 IPR005311 Penicillin-binding protein, dimerisation domain RD05_RS04225 IPR037532 Peptidoglycan D,D-transpeptidase FtsI RD05_RS04225 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS04225 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS04230 IPR035911 MurE/MurF, N-terminal RD05_RS04230 IPR013221 Mur ligase, central RD05_RS04230 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RD05_RS04230 IPR036565 Mur-like, catalytic domain superfamily RD05_RS04230 IPR036615 Mur ligase, C-terminal domain superfamily RD05_RS04230 IPR004101 Mur ligase, C-terminal RD05_RS04235 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RD05_RS04235 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RD05_RS04235 IPR000715 Glycosyl transferase, family 4 RD05_RS04240 IPR036615 Mur ligase, C-terminal domain superfamily RD05_RS04240 IPR018109 Folylpolyglutamate synthetase, conserved site RD05_RS04240 IPR036565 Mur-like, catalytic domain superfamily RD05_RS04240 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RD05_RS04240 IPR004101 Mur ligase, C-terminal RD05_RS04240 IPR013221 Mur ligase, central RD05_RS04245 IPR013437 Probable peptidoglycan glycosyltransferase FtsW RD05_RS04245 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA RD05_RS04250 IPR006009 N-acetylglucosaminyltransferase, MurG RD05_RS04250 IPR007235 Glycosyl transferase, family 28, C-terminal RD05_RS04250 IPR004276 Glycosyltransferase family 28, N-terminal domain RD05_RS04255 IPR036565 Mur-like, catalytic domain superfamily RD05_RS04255 IPR004101 Mur ligase, C-terminal RD05_RS04255 IPR036615 Mur ligase, C-terminal domain superfamily RD05_RS04255 IPR013221 Mur ligase, central RD05_RS04255 IPR000713 Mur ligase, N-terminal catalytic domain RD05_RS04255 IPR005758 UDP-N-acetylmuramate--L-alanine ligase RD05_RS04260 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS04260 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RD05_RS04260 IPR011095 D-alanine--D-alanine ligase, C-terminal RD05_RS04260 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RD05_RS04260 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS04260 IPR011761 ATP-grasp fold RD05_RS04260 IPR005905 D-alanine--D-alanine ligase RD05_RS04265 IPR026579 Cell division protein FtsQ RD05_RS04265 IPR034746 POTRA domain RD05_RS04265 IPR005548 Cell division protein FtsQ/DivIB RD05_RS04265 IPR013685 POTRA domain, FtsQ-type RD05_RS04270 IPR003494 SHS2 domain inserted in FtsA RD05_RS04270 IPR020823 Cell division protein FtsA RD05_RS04275 IPR036525 Tubulin/FtsZ, GTPase domain superfamily RD05_RS04275 IPR000158 Cell division protein FtsZ RD05_RS04275 IPR020805 Cell division protein FtsZ, conserved site RD05_RS04275 IPR024757 Cell division protein FtsZ, C-terminal RD05_RS04275 IPR003008 Tubulin/FtsZ, GTPase domain RD05_RS04275 IPR008280 Tubulin/FtsZ, C-terminal RD05_RS04275 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RD05_RS04280 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RD05_RS04280 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS04280 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RD05_RS04280 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RD05_RS04290 IPR011055 Duplicated hybrid motif RD05_RS04290 IPR018392 LysM domain RD05_RS04290 IPR013731 Opacity-associated protein A, N-terminal RD05_RS04290 IPR016047 Peptidase M23 RD05_RS04295 IPR036670 SecA, preprotein cross-linking domain superfamily RD05_RS04295 IPR014018 SecA motor DEAD RD05_RS04295 IPR036266 SecA, Wing/Scaffold superfamily RD05_RS04295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04295 IPR004027 SEC-C motif RD05_RS04295 IPR000185 Protein translocase subunit SecA RD05_RS04295 IPR011115 SecA DEAD-like, N-terminal RD05_RS04295 IPR011116 SecA Wing/Scaffold RD05_RS04295 IPR020937 SecA conserved site RD05_RS04295 IPR011130 SecA, preprotein cross-linking domain RD05_RS04305 IPR005064 Bordetella uptake gene RD05_RS04305 IPR042100 Bordetella uptake gene, domain 1 RD05_RS04315 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS04315 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS04315 IPR036291 NAD(P)-binding domain superfamily RD05_RS04315 IPR011283 Acetoacetyl-CoA reductase RD05_RS04320 IPR023080 D-amino acid dehydrogenase DadA RD05_RS04320 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS04320 IPR006076 FAD dependent oxidoreductase RD05_RS04325 IPR011991 ArsR-like helix-turn-helix domain RD05_RS04325 IPR000485 AsnC-type HTH domain RD05_RS04325 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04325 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04325 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS04325 IPR011008 Dimeric alpha-beta barrel RD05_RS04325 IPR019888 Transcription regulator AsnC-type RD05_RS04325 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS04335 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel RD05_RS04335 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP RD05_RS04345 IPR036291 NAD(P)-binding domain superfamily RD05_RS04345 IPR041121 SDH, C-terminal RD05_RS04345 IPR011342 Shikimate dehydrogenase RD05_RS04345 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RD05_RS04345 IPR022893 Shikimate dehydrogenase family RD05_RS04345 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RD05_RS04355 IPR012340 Nucleic acid-binding, OB-fold RD05_RS04355 IPR001900 Ribonuclease II/R RD05_RS04360 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RD05_RS04360 IPR029058 Alpha/Beta hydrolase fold RD05_RS04365 IPR005757 Murein peptide ligase RD05_RS04365 IPR036565 Mur-like, catalytic domain superfamily RD05_RS04365 IPR000713 Mur ligase, N-terminal catalytic domain RD05_RS04365 IPR004101 Mur ligase, C-terminal RD05_RS04365 IPR036615 Mur ligase, C-terminal domain superfamily RD05_RS04365 IPR013221 Mur ligase, central RD05_RS04370 IPR036249 Thioredoxin-like superfamily RD05_RS04370 IPR013766 Thioredoxin domain RD05_RS04370 IPR017937 Thioredoxin, conserved site RD05_RS04370 IPR013740 Redoxin RD05_RS04370 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE RD05_RS04375 IPR018509 Dehydroquinase, class II, conserved site RD05_RS04375 IPR001874 Dehydroquinase, class II RD05_RS04375 IPR036441 Dehydroquinase, class II superfamily RD05_RS04380 IPR000089 Biotin/lipoyl attachment RD05_RS04380 IPR011053 Single hybrid motif RD05_RS04380 IPR001882 Biotin-binding site RD05_RS04380 IPR001249 Acetyl-CoA biotin carboxyl carrier RD05_RS04385 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS04385 IPR011761 ATP-grasp fold RD05_RS04385 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS04385 IPR005481 Biotin carboxylase-like, N-terminal domain RD05_RS04385 IPR011054 Rudiment single hybrid motif RD05_RS04385 IPR011764 Biotin carboxylation domain RD05_RS04385 IPR005482 Biotin carboxylase, C-terminal RD05_RS04385 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS04385 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RD05_RS04390 IPR004498 Ribosomal protein L11 methyltransferase RD05_RS04390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS04400 IPR029056 Ribokinase-like RD05_RS04400 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RD05_RS04400 IPR011611 Carbohydrate kinase PfkB RD05_RS04425 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB RD05_RS04425 IPR024024 D-alanyl transfer protein DltB RD05_RS04425 IPR004299 Membrane bound O-acyl transferase, MBOAT RD05_RS04430 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS04430 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS04430 IPR010072 D-alanine--D-alanyl carrier protein ligase RD05_RS04430 IPR000873 AMP-dependent synthetase/ligase RD05_RS04430 IPR010071 Amino acid adenylation domain RD05_RS04430 IPR020845 AMP-binding, conserved site RD05_RS04445 IPR033909 Ribonucleotide reductase small subunit RD05_RS04445 IPR000358 Ribonucleotide reductase small subunit family RD05_RS04445 IPR012348 Ribonucleotide reductase-like RD05_RS04445 IPR009078 Ferritin-like superfamily RD05_RS04450 IPR013509 Ribonucleotide reductase large subunit, N-terminal RD05_RS04450 IPR039718 Ribonucleoside-diphosphate reductase large subunit RD05_RS04450 IPR005144 ATP-cone domain RD05_RS04450 IPR013346 Ribonucleotide reductase, class I , alpha subunit RD05_RS04450 IPR000788 Ribonucleotide reductase large subunit, C-terminal RD05_RS04450 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RD05_RS04465 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS04465 IPR011008 Dimeric alpha-beta barrel RD05_RS04465 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04465 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04465 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS04465 IPR000485 AsnC-type HTH domain RD05_RS04465 IPR019888 Transcription regulator AsnC-type RD05_RS04480 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RD05_RS04480 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS04480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS04480 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 RD05_RS04480 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RD05_RS04480 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RD05_RS04480 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RD05_RS04480 IPR033910 Glutamyl-tRNA synthetase RD05_RS04485 IPR036291 NAD(P)-binding domain superfamily RD05_RS04485 IPR016181 Acyl-CoA N-acyltransferase RD05_RS04485 IPR011761 ATP-grasp fold RD05_RS04485 IPR016102 Succinyl-CoA synthetase-like RD05_RS04485 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS04485 IPR003781 CoA-binding RD05_RS04485 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RD05_RS04485 IPR000182 GNAT domain RD05_RS04495 IPR000524 Transcription regulator HTH, GntR RD05_RS04495 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04495 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS04495 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04495 IPR011711 GntR, C-terminal RD05_RS04495 IPR000485 AsnC-type HTH domain RD05_RS04505 IPR011545 DEAD/DEAH box helicase domain RD05_RS04505 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain RD05_RS04505 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily RD05_RS04505 IPR028619 ATP-dependent RNA helicase DbpA RD05_RS04505 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS04505 IPR014014 RNA helicase, DEAD-box type, Q motif RD05_RS04505 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RD05_RS04505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04505 IPR001650 Helicase, C-terminal RD05_RS04510 IPR037523 Vicinal oxygen chelate (VOC) domain RD05_RS04510 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS04510 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS04515 IPR000868 Isochorismatase-like RD05_RS04515 IPR036380 Isochorismatase-like superfamily RD05_RS04515 IPR019916 Isochorismatase, RutB RD05_RS04520 IPR035906 MetI-like superfamily RD05_RS04520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS04525 IPR017871 ABC transporter, conserved site RD05_RS04525 IPR003439 ABC transporter-like RD05_RS04525 IPR003593 AAA+ ATPase domain RD05_RS04525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04535 IPR029058 Alpha/Beta hydrolase fold RD05_RS04535 IPR003140 Phospholipase/carboxylesterase/thioesterase RD05_RS04540 IPR006839 Ribosome-associated, YjgA RD05_RS04540 IPR023153 PSPTO4464-like domain superfamily RD05_RS04545 IPR035068 Metalloprotease TldD/PmbA, N-terminal RD05_RS04545 IPR002510 Metalloprotease TldD/PmbA RD05_RS04545 IPR036059 Metalloprotease TldD/PmbA superfamily RD05_RS04550 IPR041722 Alpha-keto acid binding periplasmic protein RD05_RS04550 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS04550 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS04550 IPR026289 Solute binding protein, TakP-like RD05_RS04550 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS04555 IPR005823 Ribosomal protein L13, bacterial-type RD05_RS04555 IPR036899 Ribosomal protein L13 superfamily RD05_RS04555 IPR005822 Ribosomal protein L13 RD05_RS04560 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS04560 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS04560 IPR000754 Ribosomal protein S9 RD05_RS04560 IPR020574 Ribosomal protein S9, conserved site RD05_RS04560 IPR023035 Ribosomal protein S9, bacterial/plastid RD05_RS04565 IPR000534 Semialdehyde dehydrogenase, NAD-binding RD05_RS04565 IPR036291 NAD(P)-binding domain superfamily RD05_RS04565 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RD05_RS04565 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RD05_RS04565 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RD05_RS04575 IPR016092 FeS cluster insertion protein RD05_RS04575 IPR035903 HesB-like domain superfamily RD05_RS04575 IPR023063 FeS cluster insertion protein ErpA RD05_RS04575 IPR017870 FeS cluster insertion, C-terminal, conserved site RD05_RS04575 IPR000361 FeS cluster biogenesis RD05_RS04580 IPR005338 Anhydro-N-acetylmuramic acid kinase RD05_RS04585 IPR003646 SH3-like domain, bacterial-type RD05_RS04585 IPR016047 Peptidase M23 RD05_RS04585 IPR011055 Duplicated hybrid motif RD05_RS04595 IPR002942 RNA-binding S4 domain RD05_RS04595 IPR024088 Tyrosine-tRNA ligase, bacterial-type RD05_RS04595 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 RD05_RS04595 IPR036986 RNA-binding S4 domain superfamily RD05_RS04595 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS04595 IPR002307 Tyrosine-tRNA ligase RD05_RS04595 IPR002305 Aminoacyl-tRNA synthetase, class Ic RD05_RS04595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS04605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS04605 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS04605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS04605 IPR001085 Serine hydroxymethyltransferase RD05_RS04605 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RD05_RS04605 IPR039429 Serine hydroxymethyltransferase-like domain RD05_RS04610 IPR003796 Ribonucleotide reductase regulator NrdR-like RD05_RS04610 IPR005144 ATP-cone domain RD05_RS04625 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RD05_RS04625 IPR004794 Riboflavin biosynthesis protein RibD RD05_RS04625 IPR024072 Dihydrofolate reductase-like domain superfamily RD05_RS04625 IPR016193 Cytidine deaminase-like RD05_RS04625 IPR002125 Cytidine and deoxycytidylate deaminase domain RD05_RS04625 IPR016192 APOBEC/CMP deaminase, zinc-binding RD05_RS04625 IPR011549 Riboflavin-specific deaminase, C-terminal RD05_RS04640 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS04640 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS04640 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS04640 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS04640 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS04640 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS04640 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS04640 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS04640 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS04640 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS04640 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS04640 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS04650 IPR005064 Bordetella uptake gene RD05_RS04650 IPR042100 Bordetella uptake gene, domain 1 RD05_RS04655 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04655 IPR000847 Transcription regulator HTH, LysR RD05_RS04655 IPR005119 LysR, substrate-binding RD05_RS04655 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04660 IPR023606 CoA-transferase family III domain superfamily RD05_RS04660 IPR003673 CoA-transferase family III RD05_RS04680 IPR014710 RmlC-like jelly roll fold RD05_RS04680 IPR003829 Pirin, N-terminal domain RD05_RS04680 IPR008778 Pirin, C-terminal domain RD05_RS04680 IPR012093 Pirin RD05_RS04680 IPR011051 RmlC-like cupin domain superfamily RD05_RS04695 IPR001789 Signal transduction response regulator, receiver domain RD05_RS04695 IPR011006 CheY-like superfamily RD05_RS04700 IPR006333 Cytochrome o ubiquinol oxidase subunit II RD05_RS04700 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily RD05_RS04700 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RD05_RS04700 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain RD05_RS04700 IPR008972 Cupredoxin RD05_RS04700 IPR002429 Cytochrome c oxidase subunit II-like C-terminal RD05_RS04700 IPR010514 COX aromatic rich motif RD05_RS04705 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RD05_RS04705 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RD05_RS04705 IPR000883 Cytochrome c oxidase subunit I RD05_RS04705 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD05_RS04705 IPR023616 Cytochrome c oxidase-like, subunit I domain RD05_RS04710 IPR000298 Cytochrome c oxidase subunit III-like RD05_RS04710 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD05_RS04710 IPR024791 Cytochrome c oxidase subunit III RD05_RS04710 IPR033946 Ubiquinol oxidase subunit III domain RD05_RS04710 IPR035973 Cytochrome c oxidase subunit III-like superfamily RD05_RS04710 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RD05_RS04715 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RD05_RS04715 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RD05_RS04720 IPR011991 ArsR-like helix-turn-helix domain RD05_RS04720 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04720 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04720 IPR001845 HTH ArsR-type DNA-binding domain RD05_RS04740 IPR036237 Xylose isomerase-like superfamily RD05_RS04740 IPR007801 Uncharacterised protein family UPF0276 RD05_RS04755 IPR010105 TonB-dependent siderophore receptor RD05_RS04755 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS04755 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS04755 IPR039423 TonB-dependent receptor-like RD05_RS04755 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS04755 IPR012910 TonB-dependent receptor, plug domain RD05_RS04770 IPR018392 LysM domain RD05_RS04770 IPR011055 Duplicated hybrid motif RD05_RS04770 IPR016047 Peptidase M23 RD05_RS04770 IPR036779 LysM domain superfamily RD05_RS04785 IPR007551 Protein of unknown function DUF520 RD05_RS04785 IPR035571 UPF0234-like, C-terminal RD05_RS04785 IPR036183 YajQ-like superfamily RD05_RS04785 IPR035570 UPF0234, N-terminal RD05_RS04795 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04795 IPR039425 RNA polymerase sigma-70 like RD05_RS04795 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS04795 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD05_RS04795 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS04795 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS04795 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS04795 IPR014284 RNA polymerase sigma-70 like domain RD05_RS04815 IPR001110 Uncharacterised protein family UPF0012, conserved site RD05_RS04815 IPR036526 Carbon-nitrogen hydrolase superfamily RD05_RS04815 IPR003010 Carbon-nitrogen hydrolase RD05_RS04820 IPR036059 Metalloprotease TldD/PmbA superfamily RD05_RS04820 IPR025502 TldD RD05_RS04820 IPR002510 Metalloprotease TldD/PmbA RD05_RS04820 IPR035068 Metalloprotease TldD/PmbA, N-terminal RD05_RS04825 IPR013785 Aldolase-type TIM barrel RD05_RS04825 IPR006219 DHAP synthase, class 1 RD05_RS04825 IPR006218 DAHP synthetase I/KDSA RD05_RS04830 IPR024973 ESPR domain RD05_RS04830 IPR011050 Pectin lyase fold/virulence factor RD05_RS04830 IPR024973 ESPR domain RD05_RS04830 IPR008619 Filamentous haemagglutinin repeat RD05_RS04830 IPR008638 Filamentous haemagglutinin, N-terminal RD05_RS04830 IPR025157 Hemagglutinin repeat RD05_RS04830 IPR008619 Filamentous haemagglutinin repeat RD05_RS04830 IPR008638 Filamentous haemagglutinin, N-terminal RD05_RS04830 IPR012334 Pectin lyase fold RD05_RS04830 IPR012334 Pectin lyase fold RD05_RS04830 IPR011050 Pectin lyase fold/virulence factor RD05_RS04830 IPR025157 Hemagglutinin repeat RD05_RS04835 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS04835 IPR006094 FAD linked oxidase, N-terminal RD05_RS04835 IPR004113 FAD-linked oxidase, C-terminal RD05_RS04835 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS04835 IPR004490 Glycolate oxidase subunit GlcD RD05_RS04835 IPR016166 FAD-binding domain, PCMH-type RD05_RS04835 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS04840 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS04840 IPR006094 FAD linked oxidase, N-terminal RD05_RS04840 IPR004490 Glycolate oxidase subunit GlcD RD05_RS04840 IPR004113 FAD-linked oxidase, C-terminal RD05_RS04840 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS04840 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS04840 IPR016166 FAD-binding domain, PCMH-type RD05_RS04845 IPR016166 FAD-binding domain, PCMH-type RD05_RS04845 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS04845 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS04845 IPR006094 FAD linked oxidase, N-terminal RD05_RS04845 IPR016169 FAD-binding, type PCMH, subdomain 2 RD05_RS04850 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS04850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS04850 IPR004017 Cysteine-rich domain RD05_RS04850 IPR012257 Glycolate oxidase, iron-sulphur subunit RD05_RS04850 IPR009051 Alpha-helical ferredoxin RD05_RS04855 IPR029058 Alpha/Beta hydrolase fold RD05_RS04855 IPR000801 Putative esterase RD05_RS04860 IPR010105 TonB-dependent siderophore receptor RD05_RS04860 IPR010917 TonB-dependent receptor, conserved site RD05_RS04860 IPR039426 Vitamin B12 transporter BtuB-like RD05_RS04860 IPR012910 TonB-dependent receptor, plug domain RD05_RS04860 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS04860 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS04860 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS04870 IPR012136 NADP transhydrogenase, beta subunit RD05_RS04870 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS04870 IPR034300 NADP transhydrogenase beta-like domain RD05_RS04875 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RD05_RS04875 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RD05_RS04875 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RD05_RS04875 IPR036291 NAD(P)-binding domain superfamily RD05_RS04875 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 RD05_RS04885 IPR042100 Bordetella uptake gene, domain 1 RD05_RS04885 IPR005064 Bordetella uptake gene RD05_RS04890 IPR005119 LysR, substrate-binding RD05_RS04890 IPR000847 Transcription regulator HTH, LysR RD05_RS04890 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04890 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS04895 IPR023382 Adenine nucleotide alpha hydrolase-like domains RD05_RS04895 IPR004506 tRNA-specific 2-thiouridylase RD05_RS04900 IPR002781 Transmembrane protein TauE-like RD05_RS04905 IPR034343 Uncharacterized GST-like protein YibF RD05_RS04905 IPR004046 Glutathione S-transferase, C-terminal RD05_RS04905 IPR004045 Glutathione S-transferase, N-terminal RD05_RS04905 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS04905 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RD05_RS04905 IPR036249 Thioredoxin-like superfamily RD05_RS04910 IPR013539 Adenylosuccinate lyase PurB, C-terminal RD05_RS04910 IPR004769 Adenylosuccinate lyase RD05_RS04910 IPR008948 L-Aspartase-like RD05_RS04910 IPR022761 Fumarate lyase, N-terminal RD05_RS04910 IPR000362 Fumarate lyase family RD05_RS04910 IPR020557 Fumarate lyase, conserved site RD05_RS04910 IPR024083 Fumarase/histidase, N-terminal RD05_RS04915 IPR015984 Cytochrome c prime, subgroup RD05_RS04915 IPR010980 Cytochrome c/b562 RD05_RS04915 IPR012127 Cytochrome c prime RD05_RS04915 IPR002321 Cytochrome c, class II RD05_RS04935 IPR002549 Transmembrane protein TqsA-like RD05_RS04945 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS04945 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS04945 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS04945 IPR000524 Transcription regulator HTH, GntR RD05_RS04945 IPR011711 GntR, C-terminal RD05_RS04955 IPR023631 Amidase signature domain RD05_RS04955 IPR036928 Amidase signature (AS) superfamily RD05_RS04955 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS04955 IPR020556 Amidase, conserved site RD05_RS04955 IPR000120 Amidase RD05_RS04960 IPR023606 CoA-transferase family III domain superfamily RD05_RS04960 IPR003673 CoA-transferase family III RD05_RS04965 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS04965 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS04965 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS04965 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS04980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS04980 IPR035906 MetI-like superfamily RD05_RS04980 IPR005889 Nitrate transport permease RD05_RS04985 IPR003593 AAA+ ATPase domain RD05_RS04985 IPR003439 ABC transporter-like RD05_RS04985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04995 IPR036291 NAD(P)-binding domain superfamily RD05_RS04995 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS04995 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS05000 IPR005471 Transcription regulator IclR, N-terminal RD05_RS05000 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS05000 IPR029016 GAF-like domain superfamily RD05_RS05000 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS05000 IPR014757 Transcription regulator IclR, C-terminal RD05_RS05010 IPR000873 AMP-dependent synthetase/ligase RD05_RS05010 IPR020845 AMP-binding, conserved site RD05_RS05010 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS05010 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS05015 IPR006175 YjgF/YER057c/UK114 family RD05_RS05015 IPR019898 Putative aminoacrylate peracid reductase RutC RD05_RS05015 IPR035959 RutC-like superfamily RD05_RS05020 IPR001851 ABC transporter, permease RD05_RS05035 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS05035 IPR003439 ABC transporter-like RD05_RS05035 IPR017871 ABC transporter, conserved site RD05_RS05035 IPR003593 AAA+ ATPase domain RD05_RS05035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05040 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD05_RS05040 IPR023663 NADPH dehydrogenase RD05_RS05040 IPR013785 Aldolase-type TIM barrel RD05_RS05055 IPR005119 LysR, substrate-binding RD05_RS05055 IPR000847 Transcription regulator HTH, LysR RD05_RS05055 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS05055 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS05065 IPR002125 Cytidine and deoxycytidylate deaminase domain RD05_RS05065 IPR016192 APOBEC/CMP deaminase, zinc-binding RD05_RS05065 IPR016193 Cytidine deaminase-like RD05_RS05070 IPR011701 Major facilitator superfamily RD05_RS05070 IPR004747 Cyanate transport system protein RD05_RS05070 IPR020846 Major facilitator superfamily domain RD05_RS05070 IPR036259 MFS transporter superfamily RD05_RS05075 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS05075 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS05075 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 RD05_RS05075 IPR000847 Transcription regulator HTH, LysR RD05_RS05075 IPR005119 LysR, substrate-binding RD05_RS05090 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS05090 IPR000120 Amidase RD05_RS05090 IPR036928 Amidase signature (AS) superfamily RD05_RS05090 IPR023631 Amidase signature domain RD05_RS05090 IPR020556 Amidase, conserved site RD05_RS05095 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RD05_RS05095 IPR001783 Lumazine-binding protein RD05_RS05095 IPR026017 Lumazine-binding domain RD05_RS05095 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS05100 IPR005064 Bordetella uptake gene RD05_RS05100 IPR042100 Bordetella uptake gene, domain 1 RD05_RS05105 IPR000485 AsnC-type HTH domain RD05_RS05105 IPR011991 ArsR-like helix-turn-helix domain RD05_RS05105 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS05105 IPR019888 Transcription regulator AsnC-type RD05_RS05105 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS05105 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS05105 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS05105 IPR011008 Dimeric alpha-beta barrel RD05_RS05115 IPR020845 AMP-binding, conserved site RD05_RS05115 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS05115 IPR000873 AMP-dependent synthetase/ligase RD05_RS05115 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS05125 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS05125 IPR035906 MetI-like superfamily RD05_RS05130 IPR003593 AAA+ ATPase domain RD05_RS05130 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05130 IPR015859 ABC transporter, taurine import, TauD RD05_RS05130 IPR017871 ABC transporter, conserved site RD05_RS05130 IPR003439 ABC transporter-like RD05_RS05145 IPR020843 Polyketide synthase, enoylreductase domain RD05_RS05145 IPR004627 L-threonine 3-dehydrogenase RD05_RS05145 IPR011032 GroES-like superfamily RD05_RS05145 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD05_RS05145 IPR013154 Alcohol dehydrogenase, N-terminal RD05_RS05145 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS05145 IPR036291 NAD(P)-binding domain superfamily RD05_RS05165 IPR023299 P-type ATPase, cytoplasmic domain N RD05_RS05165 IPR018303 P-type ATPase, phosphorylation site RD05_RS05165 IPR017969 Heavy-metal-associated, conserved site RD05_RS05165 IPR008250 P-type ATPase, A domain superfamily RD05_RS05165 IPR036412 HAD-like superfamily RD05_RS05165 IPR023214 HAD superfamily RD05_RS05165 IPR006122 Heavy metal-associated domain, copper ion-binding RD05_RS05165 IPR023298 P-type ATPase, transmembrane domain superfamily RD05_RS05165 IPR036163 Heavy metal-associated domain superfamily RD05_RS05165 IPR027256 P-type ATPase, subfamily IB RD05_RS05165 IPR006121 Heavy metal-associated domain, HMA RD05_RS05165 IPR001757 P-type ATPase RD05_RS05170 IPR006674 HD domain RD05_RS05170 IPR003607 HD/PDEase domain RD05_RS05175 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD05_RS05175 IPR004839 Aminotransferase, class I/classII RD05_RS05175 IPR000796 Aspartate/other aminotransferase RD05_RS05175 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS05175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS05175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS05180 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS05180 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS05180 IPR000847 Transcription regulator HTH, LysR RD05_RS05180 IPR005119 LysR, substrate-binding RD05_RS05180 IPR037412 HTH-type transcriptional regulator IlvR, PBP2 domain RD05_RS05190 IPR005828 Major facilitator, sugar transporter-like RD05_RS05190 IPR020846 Major facilitator superfamily domain RD05_RS05190 IPR004736 MFS transporter, metabolite:H symporter RD05_RS05190 IPR005829 Sugar transporter, conserved site RD05_RS05190 IPR036259 MFS transporter superfamily RD05_RS05195 IPR036291 NAD(P)-binding domain superfamily RD05_RS05195 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS05195 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS05200 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS05200 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS05200 IPR036291 NAD(P)-binding domain superfamily RD05_RS05210 IPR002299 Porin, Neisseria sp. type RD05_RS05210 IPR023614 Porin domain superfamily RD05_RS05210 IPR033900 Porin domain, Gram-negative type RD05_RS05210 IPR001702 Porin, Gram-negative type RD05_RS05215 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS05215 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS05215 IPR003700 Ketopantoate hydroxymethyltransferase RD05_RS05220 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain RD05_RS05220 IPR000847 Transcription regulator HTH, LysR RD05_RS05220 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS05220 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS05220 IPR005119 LysR, substrate-binding RD05_RS05260 IPR036291 NAD(P)-binding domain superfamily RD05_RS05260 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS05260 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS05265 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS05265 IPR009057 Homeobox-like domain superfamily RD05_RS05265 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS05265 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RD05_RS05275 IPR007844 AsmA RD05_RS05280 IPR011257 DNA glycosylase RD05_RS05280 IPR004597 DNA-3-methyladenine glycosylase I RD05_RS05280 IPR005019 Methyladenine glycosylase RD05_RS05285 IPR015358 Transcription regulator MerR, DNA binding RD05_RS05285 IPR010211 Redox-sensitive transcriptional activator SoxR RD05_RS05285 IPR009061 Putative DNA-binding domain superfamily RD05_RS05285 IPR000551 MerR-type HTH domain RD05_RS05300 IPR006059 Bacterial extracellular solute-binding protein RD05_RS05310 IPR023753 FAD/NAD(P)-binding domain RD05_RS05310 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS05310 IPR022962 Soluble pyridine nucleotide transhydrogenase RD05_RS05310 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RD05_RS05310 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RD05_RS05310 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS05315 IPR003593 AAA+ ATPase domain RD05_RS05315 IPR003439 ABC transporter-like RD05_RS05315 IPR017871 ABC transporter, conserved site RD05_RS05315 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05315 IPR013611 Transport-associated OB, type 2 RD05_RS05315 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC RD05_RS05320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS05320 IPR035906 MetI-like superfamily RD05_RS05325 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like RD05_RS05325 IPR035277 MalF, N-terminal RD05_RS05325 IPR029345 Maltose transport system permease protein MalF, P2 domain RD05_RS05325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS05325 IPR035906 MetI-like superfamily RD05_RS05345 IPR005064 Bordetella uptake gene RD05_RS05345 IPR042100 Bordetella uptake gene, domain 1 RD05_RS05350 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS05350 IPR000524 Transcription regulator HTH, GntR RD05_RS05350 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS05350 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS05350 IPR011711 GntR, C-terminal RD05_RS05375 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA RD05_RS05375 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RD05_RS05375 IPR039697 Iron-type alcohol dehydrogenase-like RD05_RS05390 IPR004872 Lipoprotein NlpA family RD05_RS05395 IPR035906 MetI-like superfamily RD05_RS05395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS05400 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain RD05_RS05400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05400 IPR018449 NIL domain RD05_RS05400 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal RD05_RS05400 IPR017871 ABC transporter, conserved site RD05_RS05400 IPR003439 ABC transporter-like RD05_RS05400 IPR003593 AAA+ ATPase domain RD05_RS05400 IPR026253 Methionine import ATP-binding protein MetN RD05_RS05405 IPR000322 Glycoside hydrolase family 31 RD05_RS05405 IPR013780 Glycosyl hydrolase, all-beta RD05_RS05405 IPR017853 Glycoside hydrolase superfamily RD05_RS05405 IPR011013 Galactose mutarotase-like domain superfamily RD05_RS05405 IPR025887 Glycoside hydrolase family 31, N-terminal domain RD05_RS05415 IPR033942 Inositol monophosphatase RD05_RS05415 IPR020583 Inositol monophosphatase, metal-binding site RD05_RS05415 IPR022337 Inositol monophosphatase, SuhB RD05_RS05415 IPR000760 Inositol monophosphatase-like RD05_RS05415 IPR020550 Inositol monophosphatase, conserved site RD05_RS05425 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS05425 IPR000873 AMP-dependent synthetase/ligase RD05_RS05425 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS05425 IPR020845 AMP-binding, conserved site RD05_RS05430 IPR017439 Amidohydrolase RD05_RS05430 IPR002933 Peptidase M20 RD05_RS05430 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS05430 IPR011650 Peptidase M20, dimerisation domain RD05_RS05435 IPR000847 Transcription regulator HTH, LysR RD05_RS05435 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS05435 IPR005119 LysR, substrate-binding RD05_RS05435 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS05440 IPR018383 Uncharacterised protein family UPF0324, prokaryote RD05_RS05440 IPR004630 Uncharacterised protein family UPF0324, bacteria RD05_RS05445 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase RD05_RS05445 IPR006683 Thioesterase domain RD05_RS05445 IPR029069 HotDog domain superfamily RD05_RS05445 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain RD05_RS05450 IPR038076 MgtE, N-terminal domain superfamily RD05_RS05450 IPR006669 Magnesium transporter MgtE RD05_RS05450 IPR006668 Magnesium transporter, MgtE intracellular domain RD05_RS05450 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily RD05_RS05450 IPR006667 SLC41 divalent cation transporters, integral membrane domain RD05_RS05450 IPR000644 CBS domain RD05_RS05450 IPR038048 Magnesium transporter MgtE, transmembrane domain RD05_RS05470 IPR005064 Bordetella uptake gene RD05_RS05470 IPR042100 Bordetella uptake gene, domain 1 RD05_RS05480 IPR003761 Exonuclease VII, small subunit RD05_RS05480 IPR037004 Exonuclease VII, small subunit superfamily RD05_RS05485 IPR008949 Isoprenoid synthase domain superfamily RD05_RS05485 IPR033749 Polyprenyl synthetase, conserved site RD05_RS05485 IPR000092 Polyprenyl synthetase RD05_RS05490 IPR005474 Transketolase, N-terminal RD05_RS05490 IPR033248 Transketolase, C-terminal domain RD05_RS05490 IPR005475 Transketolase-like, pyrimidine-binding domain RD05_RS05490 IPR020826 Transketolase binding site RD05_RS05490 IPR029061 Thiamin diphosphate-binding fold RD05_RS05490 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RD05_RS05490 IPR005477 Deoxyxylulose-5-phosphate synthase RD05_RS05495 IPR003801 GTP cyclohydrolase FolE2/MptA RD05_RS05495 IPR022838 GTP cyclohydrolase FolE2 RD05_RS05500 IPR035980 Ribosomal protein S6 superfamily RD05_RS05500 IPR000529 Ribosomal protein S6 RD05_RS05500 IPR020814 Ribosomal protein S6, plastid/chloroplast RD05_RS05500 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RD05_RS05505 IPR012340 Nucleic acid-binding, OB-fold RD05_RS05505 IPR023646 Primosomal replication protein PriB RD05_RS05505 IPR000424 Primosome PriB/single-strand DNA-binding RD05_RS05510 IPR036870 Ribosomal protein S18 superfamily RD05_RS05510 IPR018275 Ribosomal protein S18, conserved site RD05_RS05510 IPR001648 Ribosomal protein S18 RD05_RS05515 IPR020070 Ribosomal protein L9, N-terminal RD05_RS05515 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RD05_RS05515 IPR020069 Ribosomal protein L9, C-terminal RD05_RS05515 IPR020594 Ribosomal protein L9, bacteria/chloroplast RD05_RS05515 IPR036935 Ribosomal protein L9, N-terminal domain superfamily RD05_RS05515 IPR000244 Ribosomal protein L9 RD05_RS05515 IPR036791 Ribosomal protein L9, C-terminal domain superfamily RD05_RS05525 IPR003593 AAA+ ATPase domain RD05_RS05525 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily RD05_RS05525 IPR007692 DNA helicase, DnaB type RD05_RS05525 IPR007694 DNA helicase, DnaB-like, C-terminal RD05_RS05525 IPR007693 DNA helicase, DnaB-like, N-terminal RD05_RS05525 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RD05_RS05525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05530 IPR038770 Sodium/solute symporter superfamily RD05_RS05530 IPR016833 Putative sodium bile acid cotransporter RD05_RS05535 IPR005255 PdxA family RD05_RS05540 IPR029060 PIN-like domain superfamily RD05_RS05540 IPR003714 PhoH-like protein RD05_RS05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05540 IPR002716 PIN domain RD05_RS05545 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS05545 IPR024706 Peroxiredoxin, AhpC-type RD05_RS05545 IPR036249 Thioredoxin-like superfamily RD05_RS05545 IPR013766 Thioredoxin domain RD05_RS05550 IPR036748 MTH938-like superfamily RD05_RS05550 IPR007523 NDUFAF3/Mth938 domain-containing protein RD05_RS05555 IPR004839 Aminotransferase, class I/classII RD05_RS05555 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS05555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS05555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS05560 IPR001342 Homoserine dehydrogenase, catalytic RD05_RS05560 IPR002912 ACT domain RD05_RS05560 IPR016204 Homoserine dehydrogenase RD05_RS05560 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD05_RS05560 IPR036291 NAD(P)-binding domain superfamily RD05_RS05560 IPR019811 Homoserine dehydrogenase, conserved site RD05_RS05565 IPR004450 Threonine synthase-like RD05_RS05565 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RD05_RS05565 IPR001926 Pyridoxal-phosphate dependent enzyme RD05_RS05565 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS05565 IPR037158 Threonine synthase, N-terminal domain superfamily RD05_RS05565 IPR029144 Threonine synthase, N-terminal RD05_RS05580 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily RD05_RS05580 IPR003767 Malate/L-lactate dehydrogenase-like RD05_RS05590 IPR005064 Bordetella uptake gene RD05_RS05590 IPR042100 Bordetella uptake gene, domain 1 RD05_RS05605 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD05_RS05605 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS05605 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS05605 IPR017648 5-keto-4-deoxy-D-glucarate aldolase RD05_RS05610 IPR036510 Ribosomal protein S20 superfamily RD05_RS05610 IPR002583 Ribosomal protein S20 RD05_RS05620 IPR004268 Peptidoglycan biosynthesis protein MurJ RD05_RS05625 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS05625 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS05625 IPR036291 NAD(P)-binding domain superfamily RD05_RS05630 IPR007862 Adenylate kinase, active site lid domain RD05_RS05630 IPR033690 Adenylate kinase, conserved site RD05_RS05630 IPR000850 Adenylate kinase/UMP-CMP kinase RD05_RS05630 IPR006259 Adenylate kinase subfamily RD05_RS05630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05635 IPR003329 Acylneuraminate cytidylyltransferase RD05_RS05635 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RD05_RS05635 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS05640 IPR005651 Trm112-like RD05_RS05645 IPR003758 Tetraacyldisaccharide 4'-kinase RD05_RS05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05650 IPR003400 Biopolymer transport protein ExbD/TolR RD05_RS05655 IPR002898 MotA/TolQ/ExbB proton channel RD05_RS05665 IPR025824 OB-fold nucleic acid binding domain RD05_RS05665 IPR003753 Exonuclease VII, large subunit RD05_RS05665 IPR020579 Exonuclease VII, large subunit, C-terminal RD05_RS05670 IPR019831 Manganese/iron superoxide dismutase, N-terminal RD05_RS05670 IPR019832 Manganese/iron superoxide dismutase, C-terminal RD05_RS05670 IPR019833 Manganese/iron superoxide dismutase, binding site RD05_RS05670 IPR001189 Manganese/iron superoxide dismutase RD05_RS05670 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily RD05_RS05670 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily RD05_RS05675 IPR001807 Chloride channel, voltage gated RD05_RS05675 IPR014743 Chloride channel, core RD05_RS05680 IPR002155 Thiolase RD05_RS05680 IPR020616 Thiolase, N-terminal RD05_RS05680 IPR012793 Beta-ketoadipyl CoA thiolase RD05_RS05680 IPR020613 Thiolase, conserved site RD05_RS05680 IPR020617 Thiolase, C-terminal RD05_RS05680 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS05680 IPR016039 Thiolase-like RD05_RS05680 IPR020610 Thiolase, active site RD05_RS05690 IPR002059 Cold-shock protein, DNA-binding RD05_RS05690 IPR012156 Cold shock, CspA RD05_RS05690 IPR012340 Nucleic acid-binding, OB-fold RD05_RS05690 IPR011129 Cold shock domain RD05_RS05690 IPR019844 Cold-shock (CSD) domain RD05_RS05695 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RD05_RS05695 IPR003769 Adaptor protein ClpS, core RD05_RS05695 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RD05_RS05700 IPR001599 Alpha-2-macroglobulin RD05_RS05700 IPR002890 Macroglobulin domain RD05_RS05700 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain RD05_RS05700 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain RD05_RS05700 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain RD05_RS05700 IPR021868 Alpha-2-macroglobulin MG3 domain RD05_RS05700 IPR040639 Alpha-2-macroglobulin, MG1 domain RD05_RS05700 IPR011625 Alpha-2-macroglobulin, bait region domain RD05_RS05700 IPR026284 Alpha-2-macroglobulin, bacteria RD05_RS05700 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RD05_RS05705 IPR023346 Lysozyme-like domain superfamily RD05_RS05705 IPR011815 Penicillin-binding protein 1C RD05_RS05705 IPR009647 Penicillin-binding, C-terminal RD05_RS05705 IPR036950 Penicillin binding protein transglycosylase domain RD05_RS05705 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS05705 IPR001264 Glycosyl transferase, family 51 RD05_RS05705 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS05710 IPR019489 Clp ATPase, C-terminal RD05_RS05710 IPR036628 Clp, N-terminal domain superfamily RD05_RS05710 IPR004176 Clp, N-terminal RD05_RS05710 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA RD05_RS05710 IPR001270 ClpA/B family RD05_RS05710 IPR018368 ClpA/B, conserved site 1 RD05_RS05710 IPR003593 AAA+ ATPase domain RD05_RS05710 IPR041546 ClpA/ClpB, AAA lid domain RD05_RS05710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05710 IPR003959 ATPase, AAA-type, core RD05_RS05710 IPR028299 ClpA/B, conserved site 2 RD05_RS05715 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type RD05_RS05715 IPR007498 Intermembrane transport protein PqiA-like RD05_RS05720 IPR003399 Mce/MlaD RD05_RS05730 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS05730 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS05730 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS05730 IPR010985 Ribbon-helix-helix RD05_RS05730 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS05730 IPR024082 Proline dehydrogenase PutA, domain II RD05_RS05730 IPR024089 Proline dehydrogenase PutA, domain I/II RD05_RS05730 IPR024090 Proline dehydrogenase PutA, domain I RD05_RS05730 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain RD05_RS05730 IPR029041 FAD-linked oxidoreductase-like RD05_RS05730 IPR002872 Proline dehydrogenase domain RD05_RS05730 IPR015590 Aldehyde dehydrogenase domain RD05_RS05730 IPR013321 Arc-type ribbon-helix-helix RD05_RS05730 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 RD05_RS05730 IPR025703 Bifunctional protein PutA RD05_RS05730 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS05740 IPR028082 Periplasmic binding protein-like I RD05_RS05740 IPR000709 Leu/Ile/Val-binding protein RD05_RS05740 IPR028081 Leucine-binding protein domain RD05_RS05745 IPR001851 ABC transporter, permease RD05_RS05750 IPR001851 ABC transporter, permease RD05_RS05750 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RD05_RS05755 IPR003593 AAA+ ATPase domain RD05_RS05755 IPR003439 ABC transporter-like RD05_RS05755 IPR017871 ABC transporter, conserved site RD05_RS05755 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05760 IPR017871 ABC transporter, conserved site RD05_RS05760 IPR003593 AAA+ ATPase domain RD05_RS05760 IPR003439 ABC transporter-like RD05_RS05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05760 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS05765 IPR036259 MFS transporter superfamily RD05_RS05765 IPR020846 Major facilitator superfamily domain RD05_RS05765 IPR011701 Major facilitator superfamily RD05_RS05770 IPR009057 Homeobox-like domain superfamily RD05_RS05770 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS05770 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RD05_RS05780 IPR003991 Pertactin virulence factor family RD05_RS05780 IPR004899 Pertactin, central region RD05_RS05780 IPR003992 Pertactin autotransporter RD05_RS05780 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS05780 IPR006315 Outer membrane autotransporter barrel RD05_RS05780 IPR036709 Autotransporter beta-domain superfamily RD05_RS05780 IPR005546 Autotransporter beta-domain RD05_RS05780 IPR011050 Pectin lyase fold/virulence factor RD05_RS05790 IPR002187 Nitrogen regulatory protein PII RD05_RS05790 IPR002332 Nitrogen regulatory protein P-II, urydylation site RD05_RS05790 IPR017918 Nitrogen regulatory protein PII, conserved site RD05_RS05790 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD05_RS05790 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD05_RS05795 IPR007475 Ubiquinone biosynthesis accessory factor UbiK RD05_RS05810 IPR005829 Sugar transporter, conserved site RD05_RS05810 IPR004736 MFS transporter, metabolite:H symporter RD05_RS05810 IPR036259 MFS transporter superfamily RD05_RS05810 IPR005828 Major facilitator, sugar transporter-like RD05_RS05810 IPR020846 Major facilitator superfamily domain RD05_RS05810 IPR011701 Major facilitator superfamily RD05_RS05820 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RD05_RS05820 IPR000883 Cytochrome c oxidase subunit I RD05_RS05820 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD05_RS05820 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RD05_RS05820 IPR023616 Cytochrome c oxidase-like, subunit I domain RD05_RS05825 IPR024791 Cytochrome c oxidase subunit III RD05_RS05825 IPR000298 Cytochrome c oxidase subunit III-like RD05_RS05825 IPR035973 Cytochrome c oxidase subunit III-like superfamily RD05_RS05825 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD05_RS05825 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RD05_RS05825 IPR033946 Ubiquinol oxidase subunit III domain RD05_RS05830 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RD05_RS05830 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RD05_RS05835 IPR002994 Surfeit locus 1/Shy1 RD05_RS05840 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS05840 IPR036291 NAD(P)-binding domain superfamily RD05_RS05840 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS05840 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS05860 IPR000551 MerR-type HTH domain RD05_RS05860 IPR009061 Putative DNA-binding domain superfamily RD05_RS05860 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator RD05_RS05865 IPR023298 P-type ATPase, transmembrane domain superfamily RD05_RS05865 IPR018303 P-type ATPase, phosphorylation site RD05_RS05865 IPR001757 P-type ATPase RD05_RS05865 IPR036412 HAD-like superfamily RD05_RS05865 IPR027256 P-type ATPase, subfamily IB RD05_RS05865 IPR023299 P-type ATPase, cytoplasmic domain N RD05_RS05865 IPR023214 HAD superfamily RD05_RS05865 IPR006121 Heavy metal-associated domain, HMA RD05_RS05865 IPR036163 Heavy metal-associated domain superfamily RD05_RS05865 IPR008250 P-type ATPase, A domain superfamily RD05_RS05865 IPR017969 Heavy-metal-associated, conserved site RD05_RS05885 IPR024177 Biotin synthase RD05_RS05885 IPR006638 Elp3/MiaB/NifB RD05_RS05885 IPR007197 Radical SAM RD05_RS05885 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RD05_RS05885 IPR013785 Aldolase-type TIM barrel RD05_RS05885 IPR010722 Biotin and thiamin synthesis-associated domain RD05_RS05900 IPR013740 Redoxin RD05_RS05900 IPR037944 Peroxiredoxin-5-like RD05_RS05900 IPR013766 Thioredoxin domain RD05_RS05900 IPR036249 Thioredoxin-like superfamily RD05_RS05910 IPR002925 Dienelactone hydrolase RD05_RS05910 IPR029058 Alpha/Beta hydrolase fold RD05_RS05920 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily RD05_RS05920 IPR023045 Molybdenum cofactor biosynthesis C RD05_RS05920 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RD05_RS05930 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily RD05_RS05930 IPR003448 Molybdopterin biosynthesis MoaE RD05_RS05935 IPR012245 Molybdenum cofactor biosynthesis protein MoaB RD05_RS05935 IPR036425 MoaB/Mog-like domain superfamily RD05_RS05935 IPR001453 MoaB/Mog domain RD05_RS05935 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria RD05_RS05935 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD05_RS05940 IPR036135 MoeA, N-terminal and linker domain superfamily RD05_RS05940 IPR036425 MoaB/Mog-like domain superfamily RD05_RS05940 IPR001453 MoaB/Mog domain RD05_RS05940 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD05_RS05940 IPR038987 Molybdopterin biosynthesis protein MoeA-like RD05_RS05940 IPR005111 MoeA, C-terminal, domain IV RD05_RS05940 IPR005110 MoeA, N-terminal and linker domain RD05_RS05940 IPR036688 MoeA, C-terminal, domain IV superfamily RD05_RS05945 IPR006638 Elp3/MiaB/NifB RD05_RS05945 IPR013483 Molybdenum cofactor biosynthesis protein A RD05_RS05945 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site RD05_RS05945 IPR013785 Aldolase-type TIM barrel RD05_RS05945 IPR010505 Molybdenum cofactor synthesis C-terminal RD05_RS05945 IPR007197 Radical SAM RD05_RS05965 IPR008948 L-Aspartase-like RD05_RS05965 IPR009049 Argininosuccinate lyase RD05_RS05965 IPR024083 Fumarase/histidase, N-terminal RD05_RS05965 IPR000362 Fumarate lyase family RD05_RS05965 IPR029419 Argininosuccinate lyase, C-terminal RD05_RS05965 IPR020557 Fumarate lyase, conserved site RD05_RS05965 IPR022761 Fumarate lyase, N-terminal RD05_RS05970 IPR030192 Miniconductance mechanosensitive channel YbdG RD05_RS05970 IPR011066 Mechanosensitive ion channel MscS, C-terminal RD05_RS05970 IPR006685 Mechanosensitive ion channel MscS RD05_RS05970 IPR010920 LSM domain superfamily RD05_RS05975 IPR003694 NAD(+) synthetase RD05_RS05975 IPR036526 Carbon-nitrogen hydrolase superfamily RD05_RS05975 IPR014445 Glutamine-dependent NAD(+) synthetase RD05_RS05975 IPR022310 NAD/GMP synthase RD05_RS05975 IPR000132 Nitrilase/cyanide hydratase, conserved site RD05_RS05975 IPR003010 Carbon-nitrogen hydrolase RD05_RS05975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS05980 IPR002187 Nitrogen regulatory protein PII RD05_RS05980 IPR002332 Nitrogen regulatory protein P-II, urydylation site RD05_RS05980 IPR017918 Nitrogen regulatory protein PII, conserved site RD05_RS05980 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD05_RS05980 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD05_RS06005 IPR005119 LysR, substrate-binding RD05_RS06005 IPR000847 Transcription regulator HTH, LysR RD05_RS06005 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06005 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06010 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS06015 IPR000914 Solute-binding protein family 5 domain RD05_RS06015 IPR023765 Solute-binding protein family 5, conserved site RD05_RS06015 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS06015 IPR039424 Solute-binding protein family 5 RD05_RS06020 IPR035906 MetI-like superfamily RD05_RS06020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS06025 IPR035906 MetI-like superfamily RD05_RS06025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS06025 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS06030 IPR012340 Nucleic acid-binding, OB-fold RD05_RS06030 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06030 IPR004881 Ribosome biogenesis GTPase RsgA RD05_RS06030 IPR010914 RsgA GTPase domain RD05_RS06030 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain RD05_RS06030 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal RD05_RS06035 IPR001915 Peptidase M48 RD05_RS06035 IPR022919 Peptidase M48, protease HtpX, putative RD05_RS06040 IPR022894 Oligoribonuclease RD05_RS06040 IPR012337 Ribonuclease H-like superfamily RD05_RS06040 IPR013520 Exonuclease, RNase T/DNA polymerase III RD05_RS06040 IPR036397 Ribonuclease H superfamily RD05_RS06045 IPR036652 YjeF N-terminal domain superfamily RD05_RS06045 IPR004443 YjeF N-terminal domain RD05_RS06050 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX RD05_RS06050 IPR013225 PaaX-like, C-terminal RD05_RS06050 IPR012906 PaaX-like, N-terminal RD05_RS06050 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06055 IPR009078 Ferritin-like superfamily RD05_RS06055 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A RD05_RS06055 IPR012347 Ferritin-like RD05_RS06055 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C RD05_RS06060 IPR009359 Phenylacetic acid degradation B RD05_RS06060 IPR038693 Phenylacetyl-CoA epoxidase, subunit B RD05_RS06065 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C RD05_RS06065 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C RD05_RS06065 IPR009078 Ferritin-like superfamily RD05_RS06065 IPR012347 Ferritin-like RD05_RS06070 IPR002744 MIP18 family-like RD05_RS06070 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit RD05_RS06070 IPR034904 Fe-S cluster assembly domain superfamily RD05_RS06075 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS06075 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS06075 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS06075 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS06075 IPR012675 Beta-grasp domain superfamily RD05_RS06075 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS06075 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS06075 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS06075 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS06075 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit RD05_RS06075 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS06085 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS06085 IPR015590 Aldehyde dehydrogenase domain RD05_RS06085 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS06085 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS06085 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS06090 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS06090 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS06090 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RD05_RS06090 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS06095 IPR029069 HotDog domain superfamily RD05_RS06095 IPR011973 Phenylacetic acid degradation protein PaaD RD05_RS06095 IPR003736 Phenylacetic acid degradation-related domain RD05_RS06095 IPR006683 Thioesterase domain RD05_RS06100 IPR028154 AMP-dependent ligase, C-terminal RD05_RS06100 IPR011880 Phenylacetate-CoA ligase RD05_RS06100 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS06100 IPR000873 AMP-dependent synthetase/ligase RD05_RS06105 IPR008966 Adhesion domain superfamily RD05_RS06105 IPR039458 FimA-like RD05_RS06105 IPR036937 Fimbrial-type adhesion domain superfamily RD05_RS06120 IPR004682 TRAP transporter solute receptor, DctP family RD05_RS06120 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS06120 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS06125 IPR007387 TRAP transporter, small membrane protein DctQ RD05_RS06125 IPR004681 TRAP transporter large membrane protein DctM RD05_RS06125 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS06130 IPR007387 TRAP transporter, small membrane protein DctQ RD05_RS06135 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain RD05_RS06135 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily RD05_RS06135 IPR036921 PurM-like, N-terminal domain superfamily RD05_RS06135 IPR036676 PurM-like, C-terminal domain superfamily RD05_RS06135 IPR010918 PurM-like, C-terminal domain RD05_RS06135 IPR010073 Phosphoribosylformylglycinamidine synthase PurL RD05_RS06135 IPR017926 Glutamine amidotransferase RD05_RS06135 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal RD05_RS06135 IPR029062 Class I glutamine amidotransferase-like RD05_RS06140 IPR012334 Pectin lyase fold RD05_RS06140 IPR011050 Pectin lyase fold/virulence factor RD05_RS06140 IPR024973 ESPR domain RD05_RS06140 IPR025157 Hemagglutinin repeat RD05_RS06140 IPR008619 Filamentous haemagglutinin repeat RD05_RS06140 IPR008638 Filamentous haemagglutinin, N-terminal RD05_RS06165 IPR001303 Class II aldolase/adducin N-terminal RD05_RS06165 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RD05_RS06170 IPR026289 Solute binding protein, TakP-like RD05_RS06170 IPR041722 Alpha-keto acid binding periplasmic protein RD05_RS06170 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS06170 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS06170 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS06175 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily RD05_RS06175 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family RD05_RS06180 IPR013785 Aldolase-type TIM barrel RD05_RS06180 IPR024924 7-carboxy-7-deazaguanine synthase-like RD05_RS06180 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type RD05_RS06180 IPR007197 Radical SAM RD05_RS06185 IPR000352 Peptide chain release factor class I RD05_RS06205 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RD05_RS06205 IPR020625 Schiff base-forming aldolase, active site RD05_RS06205 IPR002220 DapA-like RD05_RS06205 IPR013785 Aldolase-type TIM barrel RD05_RS06210 IPR005064 Bordetella uptake gene RD05_RS06210 IPR042100 Bordetella uptake gene, domain 1 RD05_RS06235 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS06235 IPR010960 Flavocytochrome c RD05_RS06235 IPR012286 Tetrahaem cytochrome domain RD05_RS06235 IPR036280 Multiheme cytochrome superfamily RD05_RS06235 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RD05_RS06235 IPR013087 Zinc finger C2H2-type RD05_RS06235 IPR011031 Multihaem cytochrome RD05_RS06235 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RD05_RS06240 IPR042100 Bordetella uptake gene, domain 1 RD05_RS06240 IPR005064 Bordetella uptake gene RD05_RS06245 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS06245 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS06245 IPR036291 NAD(P)-binding domain superfamily RD05_RS06255 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RD05_RS06255 IPR006076 FAD dependent oxidoreductase RD05_RS06255 IPR031656 Alpha-glycerophosphate oxidase, C-terminal RD05_RS06255 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS06255 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily RD05_RS06260 IPR014036 DeoR C-terminal sensor domain RD05_RS06260 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06260 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06260 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RD05_RS06260 IPR001034 DeoR-type HTH domain RD05_RS06260 IPR037171 NagB/RpiA transferase-like RD05_RS06265 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC RD05_RS06265 IPR040582 MalK, OB fold domain RD05_RS06265 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS06265 IPR017871 ABC transporter, conserved site RD05_RS06265 IPR003439 ABC transporter-like RD05_RS06265 IPR003593 AAA+ ATPase domain RD05_RS06265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06270 IPR003593 AAA+ ATPase domain RD05_RS06270 IPR017871 ABC transporter, conserved site RD05_RS06270 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS06270 IPR040582 MalK, OB fold domain RD05_RS06270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06270 IPR003439 ABC transporter-like RD05_RS06270 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC RD05_RS06280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS06280 IPR035906 MetI-like superfamily RD05_RS06305 IPR011991 ArsR-like helix-turn-helix domain RD05_RS06305 IPR000485 AsnC-type HTH domain RD05_RS06305 IPR011008 Dimeric alpha-beta barrel RD05_RS06305 IPR019888 Transcription regulator AsnC-type RD05_RS06305 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS06305 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06305 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS06305 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06310 IPR006076 FAD dependent oxidoreductase RD05_RS06310 IPR023080 D-amino acid dehydrogenase DadA RD05_RS06310 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS06315 IPR004593 Nuclease SbcCD subunit D RD05_RS06315 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RD05_RS06315 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RD05_RS06315 IPR029052 Metallo-dependent phosphatase-like RD05_RS06315 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain RD05_RS06340 IPR001789 Signal transduction response regulator, receiver domain RD05_RS06340 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS06340 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS06340 IPR011006 CheY-like superfamily RD05_RS06360 IPR000644 CBS domain RD05_RS06360 IPR013785 Aldolase-type TIM barrel RD05_RS06360 IPR001093 IMP dehydrogenase/GMP reductase RD05_RS06360 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RD05_RS06360 IPR005990 Inosine-5'-monophosphate dehydrogenase RD05_RS06365 IPR022310 NAD/GMP synthase RD05_RS06365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS06365 IPR001674 GMP synthase, C-terminal RD05_RS06365 IPR022955 GMP synthase RD05_RS06365 IPR004739 GMP synthase, glutamine amidotransferase RD05_RS06365 IPR017926 Glutamine amidotransferase RD05_RS06365 IPR029062 Class I glutamine amidotransferase-like RD05_RS06365 IPR025777 GMP synthetase ATP pyrophosphatase domain RD05_RS06375 IPR012893 HipA-like, C-terminal RD05_RS06375 IPR017508 HipA, N-terminal subdomain 1 RD05_RS06385 IPR011701 Major facilitator superfamily RD05_RS06385 IPR036259 MFS transporter superfamily RD05_RS06385 IPR020846 Major facilitator superfamily domain RD05_RS06400 IPR006680 Amidohydrolase-related RD05_RS06400 IPR005920 Imidazolonepropionase RD05_RS06400 IPR011059 Metal-dependent hydrolase, composite domain superfamily RD05_RS06400 IPR032466 Metal-dependent hydrolase RD05_RS06410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06410 IPR005890 Nitrate transport ATP-binding subunit C/D RD05_RS06410 IPR017871 ABC transporter, conserved site RD05_RS06410 IPR003593 AAA+ ATPase domain RD05_RS06410 IPR003439 ABC transporter-like RD05_RS06415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS06415 IPR035906 MetI-like superfamily RD05_RS06440 IPR002818 DJ-1/PfpI RD05_RS06440 IPR029062 Class I glutamine amidotransferase-like RD05_RS06445 IPR011547 SLC26A/SulP transporter domain RD05_RS06445 IPR002645 STAS domain RD05_RS06445 IPR001902 SLC26A/SulP transporter RD05_RS06445 IPR036513 STAS domain superfamily RD05_RS06450 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RD05_RS06450 IPR001279 Metallo-beta-lactamase RD05_RS06450 IPR022712 Beta-Casp domain RD05_RS06450 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RD05_RS06465 IPR001279 Metallo-beta-lactamase RD05_RS06465 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RD05_RS06470 IPR018060 DNA binding HTH domain, AraC-type RD05_RS06470 IPR009057 Homeobox-like domain superfamily RD05_RS06470 IPR002818 DJ-1/PfpI RD05_RS06470 IPR029062 Class I glutamine amidotransferase-like RD05_RS06470 IPR018062 HTH domain AraC-type, conserved site RD05_RS06475 IPR000847 Transcription regulator HTH, LysR RD05_RS06475 IPR005119 LysR, substrate-binding RD05_RS06475 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06475 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06475 IPR037420 HTH-type transcriptional activator AmpR, PBP2 RD05_RS06490 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD05_RS06490 IPR013154 Alcohol dehydrogenase, N-terminal RD05_RS06490 IPR020843 Polyketide synthase, enoylreductase domain RD05_RS06490 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS06490 IPR011032 GroES-like superfamily RD05_RS06490 IPR036291 NAD(P)-binding domain superfamily RD05_RS06495 IPR020846 Major facilitator superfamily domain RD05_RS06495 IPR011701 Major facilitator superfamily RD05_RS06495 IPR036259 MFS transporter superfamily RD05_RS06500 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06500 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06500 IPR000524 Transcription regulator HTH, GntR RD05_RS06500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS06500 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS06500 IPR004839 Aminotransferase, class I/classII RD05_RS06510 IPR001123 Amino acid exporter protein, LeuE-type RD05_RS06510 IPR004778 Homoserine/Threonine efflux protein RD05_RS06520 IPR002933 Peptidase M20 RD05_RS06520 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD05_RS06520 IPR011650 Peptidase M20, dimerisation domain RD05_RS06520 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RD05_RS06520 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS06525 IPR039424 Solute-binding protein family 5 RD05_RS06525 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS06525 IPR023765 Solute-binding protein family 5, conserved site RD05_RS06525 IPR000914 Solute-binding protein family 5 domain RD05_RS06530 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS06530 IPR035906 MetI-like superfamily RD05_RS06535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS06535 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS06535 IPR035906 MetI-like superfamily RD05_RS06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06540 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS06540 IPR017871 ABC transporter, conserved site RD05_RS06540 IPR003593 AAA+ ATPase domain RD05_RS06540 IPR003439 ABC transporter-like RD05_RS06545 IPR000843 LacI-type HTH domain RD05_RS06545 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RD05_RS06545 IPR028082 Periplasmic binding protein-like I RD05_RS06570 IPR032816 SNARE associated Golgi protein RD05_RS06570 IPR032818 DedA family RD05_RS06580 IPR025714 Methyltransferase domain RD05_RS06580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS06595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS06595 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06595 IPR000524 Transcription regulator HTH, GntR RD05_RS06595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS06595 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS06595 IPR004839 Aminotransferase, class I/classII RD05_RS06595 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06605 IPR033704 dUTPase, trimeric RD05_RS06605 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RD05_RS06605 IPR036157 dUTPase-like superfamily RD05_RS06605 IPR029054 dUTPase-like RD05_RS06615 IPR021137 Ribosomal protein L35 RD05_RS06615 IPR037229 Ribosomal protein L35 superfamily RD05_RS06615 IPR001706 Ribosomal protein L35, non-mitochondrial RD05_RS06615 IPR018265 Ribosomal protein L35, conserved site RD05_RS06620 IPR005813 Ribosomal protein L20 RD05_RS06620 IPR035566 Ribosomal protein L20, C-terminal RD05_RS06625 IPR006195 Aminoacyl-tRNA synthetase, class II RD05_RS06625 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RD05_RS06625 IPR002319 Phenylalanyl-tRNA synthetase RD05_RS06625 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RD05_RS06625 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RD05_RS06625 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RD05_RS06630 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RD05_RS06630 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RD05_RS06630 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily RD05_RS06630 IPR005121 Ferrodoxin-fold anticodon-binding domain RD05_RS06630 IPR002547 tRNA-binding domain RD05_RS06630 IPR009061 Putative DNA-binding domain superfamily RD05_RS06630 IPR005146 B3/B4 tRNA-binding domain RD05_RS06630 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain RD05_RS06630 IPR005147 tRNA synthetase, B5-domain RD05_RS06630 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain RD05_RS06630 IPR012340 Nucleic acid-binding, OB-fold RD05_RS06635 IPR005684 Integration host factor, alpha subunit RD05_RS06635 IPR000119 Histone-like DNA-binding protein RD05_RS06635 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RD05_RS06635 IPR020816 Histone-like DNA-binding protein, conserved site RD05_RS06685 IPR007346 Endonuclease I RD05_RS06705 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD05_RS06705 IPR006130 Aspartate/ornithine carbamoyltransferase RD05_RS06705 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RD05_RS06705 IPR002082 Aspartate carbamoyltransferase RD05_RS06705 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD05_RS06710 IPR007476 Putative exonuclease, RdgC RD05_RS06720 IPR003673 CoA-transferase family III RD05_RS06720 IPR023606 CoA-transferase family III domain superfamily RD05_RS06725 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06725 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06725 IPR000847 Transcription regulator HTH, LysR RD05_RS06725 IPR005119 LysR, substrate-binding RD05_RS06745 IPR036291 NAD(P)-binding domain superfamily RD05_RS06745 IPR011283 Acetoacetyl-CoA reductase RD05_RS06745 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS06745 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS06755 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS06755 IPR035906 MetI-like superfamily RD05_RS06760 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA RD05_RS06760 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit RD05_RS06760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06760 IPR017871 ABC transporter, conserved site RD05_RS06760 IPR003439 ABC transporter-like RD05_RS06760 IPR003593 AAA+ ATPase domain RD05_RS06760 IPR013611 Transport-associated OB, type 2 RD05_RS06760 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS06765 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS06765 IPR036291 NAD(P)-binding domain superfamily RD05_RS06765 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS06765 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS06765 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD05_RS06765 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS06765 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS06765 IPR012802 Fatty oxidation complex, alpha subunit FadJ RD05_RS06765 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS06770 IPR036292 Proline/betaine transporter ProP, C-terminal RD05_RS06770 IPR015041 Osmosensory transporter coiled coil RD05_RS06770 IPR005828 Major facilitator, sugar transporter-like RD05_RS06770 IPR036259 MFS transporter superfamily RD05_RS06770 IPR005829 Sugar transporter, conserved site RD05_RS06770 IPR020846 Major facilitator superfamily domain RD05_RS06770 IPR004736 MFS transporter, metabolite:H symporter RD05_RS06775 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS06775 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS06775 IPR005467 Histidine kinase domain RD05_RS06775 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS06775 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS06775 IPR003660 HAMP domain RD05_RS06775 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS06780 IPR011006 CheY-like superfamily RD05_RS06780 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS06780 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS06780 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06780 IPR001789 Signal transduction response regulator, receiver domain RD05_RS06780 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS06785 IPR013765 DNA recombination and repair protein RecA RD05_RS06785 IPR020584 DNA recombination/repair protein RecA, conserved site RD05_RS06785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06785 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain RD05_RS06785 IPR003593 AAA+ ATPase domain RD05_RS06785 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface RD05_RS06785 IPR023400 DNA recombination and repair protein RecA, C-terminal RD05_RS06790 IPR003783 Regulatory protein RecX RD05_RS06790 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06795 IPR000847 Transcription regulator HTH, LysR RD05_RS06795 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06795 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06795 IPR005119 LysR, substrate-binding RD05_RS06795 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain RD05_RS06800 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RD05_RS06800 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal RD05_RS06800 IPR038071 UROD/MetE-like superfamily RD05_RS06800 IPR006276 Cobalamin-independent methionine synthase RD05_RS06810 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RD05_RS06810 IPR005809 Succinate--CoA synthetase, beta subunit RD05_RS06810 IPR011761 ATP-grasp fold RD05_RS06810 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS06810 IPR016102 Succinyl-CoA synthetase-like RD05_RS06810 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RD05_RS06810 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RD05_RS06815 IPR016102 Succinyl-CoA synthetase-like RD05_RS06815 IPR003781 CoA-binding RD05_RS06815 IPR005810 Succinyl-CoA ligase, alpha subunit RD05_RS06815 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RD05_RS06815 IPR036291 NAD(P)-binding domain superfamily RD05_RS06815 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site RD05_RS06815 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RD05_RS06820 IPR005496 Integral membrane protein TerC RD05_RS06820 IPR022301 Integral membrane protein YjbE RD05_RS06825 IPR005496 Integral membrane protein TerC RD05_RS06825 IPR022301 Integral membrane protein YjbE RD05_RS06830 IPR022418 Porphobilinogen deaminase, C-terminal RD05_RS06830 IPR022417 Porphobilinogen deaminase, N-terminal RD05_RS06830 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RD05_RS06830 IPR000860 Porphobilinogen deaminase RD05_RS06830 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily RD05_RS06850 IPR008162 Inorganic pyrophosphatase RD05_RS06850 IPR036649 Inorganic pyrophosphatase superfamily RD05_RS06855 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RD05_RS06855 IPR011234 Fumarylacetoacetase-like, C-terminal RD05_RS06890 IPR007055 BON domain RD05_RS06890 IPR001775 GspD/PilQ family RD05_RS06890 IPR032789 Pilus formation protein, N-terminal RD05_RS06890 IPR004846 Type II/III secretion system RD05_RS06890 IPR014004 Transport-associated and nodulation domain, bacteria RD05_RS06895 IPR022399 Helicase/secretion neighbourhood ATPase RD05_RS06895 IPR001482 Type II/IV secretion system protein RD05_RS06895 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06915 IPR005064 Bordetella uptake gene RD05_RS06915 IPR042100 Bordetella uptake gene, domain 1 RD05_RS06920 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RD05_RS06920 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD05_RS06920 IPR036291 NAD(P)-binding domain superfamily RD05_RS06920 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD05_RS06920 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RD05_RS06925 IPR003767 Malate/L-lactate dehydrogenase-like RD05_RS06925 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily RD05_RS06930 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS06930 IPR000847 Transcription regulator HTH, LysR RD05_RS06930 IPR005119 LysR, substrate-binding RD05_RS06930 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS06940 IPR006278 Sarcosine oxidase subunit beta RD05_RS06940 IPR006076 FAD dependent oxidoreductase RD05_RS06940 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS06945 IPR038561 Sarcosine oxidase subunit delta superfamily RD05_RS06945 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric RD05_RS06950 IPR041117 SoxA, A3 domain RD05_RS06950 IPR006277 Sarcosine oxidase, alpha subunit RD05_RS06950 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RD05_RS06950 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD05_RS06950 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RD05_RS06950 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal RD05_RS06950 IPR006222 Aminomethyltransferase, folate-binding domain RD05_RS06950 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS06950 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RD05_RS06950 IPR023753 FAD/NAD(P)-binding domain RD05_RS06960 IPR036477 Formyl transferase, N-terminal domain superfamily RD05_RS06960 IPR004810 Formyltetrahydrofolate deformylase RD05_RS06960 IPR002376 Formyl transferase, N-terminal RD05_RS06960 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain RD05_RS06960 IPR002912 ACT domain RD05_RS06965 IPR042100 Bordetella uptake gene, domain 1 RD05_RS06965 IPR005064 Bordetella uptake gene RD05_RS06975 IPR029058 Alpha/Beta hydrolase fold RD05_RS06975 IPR019913 Pyrimidine utilisation protein RutD RD05_RS06975 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS06985 IPR006094 FAD linked oxidase, N-terminal RD05_RS06985 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS06985 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RD05_RS06985 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RD05_RS06985 IPR016169 FAD-binding, type PCMH, subdomain 2 RD05_RS06985 IPR016167 FAD-binding, type PCMH, subdomain 1 RD05_RS06985 IPR016166 FAD-binding domain, PCMH-type RD05_RS06985 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily RD05_RS06990 IPR023940 Dihydrodipicolinate reductase RD05_RS06990 IPR022664 Dihydrodipicolinate reductase, conserved site RD05_RS06990 IPR000846 Dihydrodipicolinate reductase, N-terminal RD05_RS06990 IPR022663 Dihydrodipicolinate reductase, C-terminal RD05_RS06990 IPR036291 NAD(P)-binding domain superfamily RD05_RS06995 IPR026592 Outer membrane protein assembly factor BamE RD05_RS06995 IPR007450 Lipoprotein SmpA/OmlA RD05_RS06995 IPR037873 BamE-like RD05_RS07000 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07000 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07000 IPR002481 Ferric-uptake regulator RD05_RS07005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07005 IPR003395 RecF/RecN/SMC, N-terminal RD05_RS07005 IPR004604 DNA recombination/repair protein RecN RD05_RS07010 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal RD05_RS07010 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RD05_RS07010 IPR002504 NAD kinase RD05_RS07010 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RD05_RS07015 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain RD05_RS07015 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07015 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07015 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal RD05_RS07015 IPR002571 Heat-inducible transcription repressor HrcA RD05_RS07015 IPR029016 GAF-like domain superfamily RD05_RS07015 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily RD05_RS07020 IPR033659 Ferrochelatase, N-terminal RD05_RS07020 IPR001015 Ferrochelatase RD05_RS07020 IPR019772 Ferrochelatase, active site RD05_RS07020 IPR033644 Ferrochelatase, C-terminal RD05_RS07030 IPR009012 GrpE nucleotide exchange factor, head RD05_RS07030 IPR013805 GrpE nucleotide exchange factor, coiled-coil RD05_RS07030 IPR000740 GrpE nucleotide exchange factor RD05_RS07040 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RD05_RS07040 IPR013126 Heat shock protein 70 family RD05_RS07040 IPR018181 Heat shock protein 70, conserved site RD05_RS07040 IPR012725 Chaperone DnaK RD05_RS07040 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RD05_RS07045 IPR036869 Chaperone J-domain superfamily RD05_RS07045 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily RD05_RS07045 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RD05_RS07045 IPR008971 HSP40/DnaJ peptide-binding RD05_RS07045 IPR018253 DnaJ domain, conserved site RD05_RS07045 IPR001623 DnaJ domain RD05_RS07045 IPR002939 Chaperone DnaJ, C-terminal RD05_RS07045 IPR012724 Chaperone DnaJ RD05_RS07050 IPR011765 Peptidase M16, N-terminal RD05_RS07050 IPR007863 Peptidase M16, C-terminal RD05_RS07050 IPR001431 Peptidase M16, zinc-binding site RD05_RS07050 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RD05_RS07060 IPR016181 Acyl-CoA N-acyltransferase RD05_RS07060 IPR000182 GNAT domain RD05_RS07070 IPR000642 Peptidase M41 RD05_RS07070 IPR005936 Peptidase, FtsH RD05_RS07070 IPR003960 ATPase, AAA-type, conserved site RD05_RS07070 IPR003959 ATPase, AAA-type, core RD05_RS07070 IPR041569 AAA ATPase, AAA+ lid domain RD05_RS07070 IPR003593 AAA+ ATPase domain RD05_RS07070 IPR037219 Peptidase M41-like RD05_RS07070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07080 IPR036909 Cytochrome c-like domain superfamily RD05_RS07080 IPR009056 Cytochrome c-like domain RD05_RS07080 IPR008168 Cytochrome c, class IC RD05_RS07095 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS07095 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic RD05_RS07095 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD05_RS07115 IPR001789 Signal transduction response regulator, receiver domain RD05_RS07115 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07115 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS07115 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS07115 IPR011006 CheY-like superfamily RD05_RS07120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS07120 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS07120 IPR029016 GAF-like domain superfamily RD05_RS07120 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS07120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS07120 IPR038318 KdpD, transmembrane domain superfamily RD05_RS07120 IPR025201 Sensor protein KdpD, transmembrane domain RD05_RS07120 IPR003018 GAF domain RD05_RS07120 IPR005467 Histidine kinase domain RD05_RS07120 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS07120 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal RD05_RS07125 IPR003820 Potassium-transporting ATPase C chain RD05_RS07130 IPR001757 P-type ATPase RD05_RS07130 IPR023214 HAD superfamily RD05_RS07130 IPR018303 P-type ATPase, phosphorylation site RD05_RS07130 IPR023299 P-type ATPase, cytoplasmic domain N RD05_RS07130 IPR023298 P-type ATPase, transmembrane domain superfamily RD05_RS07130 IPR008250 P-type ATPase, A domain superfamily RD05_RS07130 IPR036412 HAD-like superfamily RD05_RS07130 IPR006391 P-type ATPase, B chain, subfamily IA RD05_RS07135 IPR004623 Potassium-transporting ATPase A chain RD05_RS07145 IPR038377 Sodium/glucose symporter superfamily RD05_RS07145 IPR001734 Sodium/solute symporter RD05_RS07145 IPR019899 Sodium/solute symporter, VC2705 subfamily RD05_RS07160 IPR000390 Small multidrug resistance protein family RD05_RS07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07165 IPR007696 DNA mismatch repair protein MutS, core RD05_RS07165 IPR036187 DNA mismatch repair protein MutS, core domain superfamily RD05_RS07165 IPR005747 Endonuclease MutS2 RD05_RS07165 IPR036063 Smr domain superfamily RD05_RS07165 IPR002625 Smr domain RD05_RS07165 IPR000432 DNA mismatch repair protein MutS, C-terminal RD05_RS07170 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD05_RS07170 IPR005982 Thioredoxin reductase RD05_RS07170 IPR023753 FAD/NAD(P)-binding domain RD05_RS07170 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS07175 IPR018541 FtsK gamma domain RD05_RS07175 IPR041027 FtsK alpha domain RD05_RS07175 IPR002543 FtsK domain RD05_RS07175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07175 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07175 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07175 IPR025199 DNA translocase FtsK, 4TM region RD05_RS07180 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RD05_RS07180 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria RD05_RS07180 IPR029046 Lipoprotein localisation LolA/LolB/LppX RD05_RS07185 IPR003593 AAA+ ATPase domain RD05_RS07185 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD05_RS07185 IPR003959 ATPase, AAA-type, core RD05_RS07185 IPR032423 AAA C-terminal domain RD05_RS07185 IPR021886 MgsA AAA+ ATPase C-terminal RD05_RS07185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07190 IPR006195 Aminoacyl-tRNA synthetase, class II RD05_RS07190 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RD05_RS07190 IPR002317 Serine-tRNA ligase, type1 RD05_RS07190 IPR033729 Serine-tRNA ligase catalytic core domain RD05_RS07190 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RD05_RS07190 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily RD05_RS07190 IPR015866 Serine-tRNA synthetase, type1, N-terminal RD05_RS07215 IPR029787 Nucleotide cyclase RD05_RS07215 IPR000160 GGDEF domain RD05_RS07215 IPR033416 Periplasmic sensor domain CHASE7 RD05_RS07230 IPR012910 TonB-dependent receptor, plug domain RD05_RS07230 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS07230 IPR011662 Secretin/TonB, short N-terminal domain RD05_RS07230 IPR039423 TonB-dependent receptor-like RD05_RS07230 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS07230 IPR010105 TonB-dependent siderophore receptor RD05_RS07230 IPR010917 TonB-dependent receptor, conserved site RD05_RS07230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS07235 IPR011701 Major facilitator superfamily RD05_RS07235 IPR036259 MFS transporter superfamily RD05_RS07235 IPR020846 Major facilitator superfamily domain RD05_RS07255 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RD05_RS07255 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like RD05_RS07255 IPR022770 Ferric iron reductase FhuF domain RD05_RS07265 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RD05_RS07265 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS07275 IPR003148 Regulator of K+ conductance, N-terminal RD05_RS07275 IPR038770 Sodium/solute symporter superfamily RD05_RS07275 IPR020884 Glutathione-regulated potassium-efflux system protein KefB RD05_RS07275 IPR006153 Cation/H+ exchanger RD05_RS07275 IPR036291 NAD(P)-binding domain superfamily RD05_RS07275 IPR004771 K+/H+ exchanger RD05_RS07280 IPR036291 NAD(P)-binding domain superfamily RD05_RS07280 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS07280 IPR011294 3-hydroxybutyrate dehydrogenase RD05_RS07280 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS07290 IPR005583 Peroxide stress protein YaaA RD05_RS07300 IPR032692 Integral membrane protein YccS, N-terminal RD05_RS07310 IPR000160 GGDEF domain RD05_RS07310 IPR029787 Nucleotide cyclase RD05_RS07320 IPR023404 Radical SAM, alpha/beta horseshoe RD05_RS07320 IPR010723 HemN, C-terminal RD05_RS07320 IPR006638 Elp3/MiaB/NifB RD05_RS07320 IPR034505 Anaerobic coproporphyrinogen-III oxidase RD05_RS07320 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN RD05_RS07320 IPR007197 Radical SAM RD05_RS07330 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS07330 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07330 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS07335 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RD05_RS07335 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RD05_RS07335 IPR033728 Threonine-tRNA ligase catalytic core domain RD05_RS07335 IPR006195 Aminoacyl-tRNA synthetase, class II RD05_RS07335 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RD05_RS07335 IPR004154 Anticodon-binding RD05_RS07335 IPR036621 Anticodon-binding domain superfamily RD05_RS07335 IPR012675 Beta-grasp domain superfamily RD05_RS07335 IPR002320 Threonine-tRNA ligase, class IIa RD05_RS07335 IPR012676 TGS-like RD05_RS07335 IPR004095 TGS RD05_RS07340 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily RD05_RS07340 IPR019813 Translation initiation factor 3, conserved site RD05_RS07340 IPR001288 Translation initiation factor 3 RD05_RS07340 IPR019815 Translation initiation factor 3, C-terminal RD05_RS07340 IPR019814 Translation initiation factor 3, N-terminal RD05_RS07340 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily RD05_RS07345 IPR011761 ATP-grasp fold RD05_RS07345 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS07345 IPR004215 Prokaryotic glutathione synthetase, N-terminal RD05_RS07345 IPR004218 Prokaryotic glutathione synthetase, ATP-binding RD05_RS07345 IPR006284 Glutathione synthetase, prokaryotic RD05_RS07345 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS07355 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RD05_RS07355 IPR000032 Phosphocarrier protein HPr-like RD05_RS07355 IPR035895 HPr-like superfamily RD05_RS07355 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RD05_RS07360 IPR008731 Phosphotransferase system, enzyme I N-terminal RD05_RS07360 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS07360 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS07360 IPR036618 PtsI, HPr-binding domain superfamily RD05_RS07360 IPR006318 Phosphotransferase system, enzyme I-like RD05_RS07360 IPR023151 PEP-utilising enzyme, conserved site RD05_RS07360 IPR036637 Phosphohistidine domain superfamily RD05_RS07360 IPR000121 PEP-utilising enzyme, C-terminal RD05_RS07360 IPR018274 PEP-utilising enzyme, active site RD05_RS07360 IPR008279 PEP-utilising enzyme, mobile domain RD05_RS07360 IPR024692 Phosphotransferase system, enzyme I RD05_RS07370 IPR036291 NAD(P)-binding domain superfamily RD05_RS07370 IPR023401 Ornithine cyclodeaminase, N-terminal RD05_RS07370 IPR003462 Ornithine cyclodeaminase/mu-crystallin RD05_RS07380 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS07380 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB RD05_RS07385 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS07385 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC RD05_RS07385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS07385 IPR035906 MetI-like superfamily RD05_RS07390 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS07390 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD RD05_RS07390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS07390 IPR035906 MetI-like superfamily RD05_RS07395 IPR003593 AAA+ ATPase domain RD05_RS07395 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS07395 IPR003439 ABC transporter-like RD05_RS07395 IPR017871 ABC transporter, conserved site RD05_RS07395 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein RD05_RS07395 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07410 IPR033689 NAD-dependent formate dehydrogenase RD05_RS07410 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD05_RS07410 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD05_RS07410 IPR036291 NAD(P)-binding domain superfamily RD05_RS07410 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD05_RS07410 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS07420 IPR038523 AmiS/UreI transporter superfamily RD05_RS07420 IPR003211 AmiS/UreI transporter RD05_RS07425 IPR004304 Acetamidase/Formamidase RD05_RS07440 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype RD05_RS07440 IPR013785 Aldolase-type TIM barrel RD05_RS07440 IPR000771 Fructose-bisphosphate aldolase, class-II RD05_RS07450 IPR018236 SAICAR synthetase, conserved site RD05_RS07450 IPR028923 SAICAR synthetase/ADE2, N-terminal RD05_RS07450 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RD05_RS07455 IPR038493 Toxin MqsR superfamily RD05_RS07455 IPR031451 mRNA interferase toxin MqsR RD05_RS07460 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RD05_RS07460 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS07460 IPR022452 Antitoxin MqsA RD05_RS07460 IPR032758 Antitoxin MqsA/HigA-2 RD05_RS07460 IPR022453 Zinc finger, MqsA-type RD05_RS07465 IPR023380 DsbB-like superfamily RD05_RS07465 IPR022920 Disulphide bond formation protein DsbB RD05_RS07465 IPR003752 Disulphide bond formation protein DsbB/BdbC RD05_RS07470 IPR024694 PurE, prokaryotic type RD05_RS07470 IPR035893 PurE domain superfamily RD05_RS07470 IPR000031 PurE domain RD05_RS07470 IPR033747 Class I PurE RD05_RS07475 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain RD05_RS07475 IPR011054 Rudiment single hybrid motif RD05_RS07475 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RD05_RS07475 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS07475 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS07475 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD05_RS07475 IPR011761 ATP-grasp fold RD05_RS07480 IPR006070 YrdC-like domain RD05_RS07480 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RD05_RS07480 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily RD05_RS07480 IPR005145 Putative GTP-binding controlling metal-binding domain RD05_RS07480 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RD05_RS07485 IPR018313 Solute-binding protein family 3, conserved site RD05_RS07485 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS07490 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07490 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07490 IPR005471 Transcription regulator IclR, N-terminal RD05_RS07490 IPR014757 Transcription regulator IclR, C-terminal RD05_RS07490 IPR029016 GAF-like domain superfamily RD05_RS07495 IPR020855 Ureohydrolase, manganese-binding site RD05_RS07495 IPR005925 Agmatinase-related RD05_RS07495 IPR006035 Ureohydrolase RD05_RS07495 IPR023696 Ureohydrolase domain superfamily RD05_RS07500 IPR018313 Solute-binding protein family 3, conserved site RD05_RS07500 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS07505 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS07505 IPR035906 MetI-like superfamily RD05_RS07505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS07510 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS07510 IPR003439 ABC transporter-like RD05_RS07510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07510 IPR017871 ABC transporter, conserved site RD05_RS07510 IPR003593 AAA+ ATPase domain RD05_RS07515 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS07515 IPR029061 Thiamin diphosphate-binding fold RD05_RS07515 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS07525 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS07525 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS07525 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS07525 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS07525 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS07525 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS07525 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS07530 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS07530 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS07530 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS07530 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS07530 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS07530 IPR029061 Thiamin diphosphate-binding fold RD05_RS07530 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS07530 IPR000399 TPP-binding enzyme, conserved site RD05_RS07535 IPR000847 Transcription regulator HTH, LysR RD05_RS07535 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07535 IPR005119 LysR, substrate-binding RD05_RS07535 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07540 IPR011932 Tyrosine recombinase XerD RD05_RS07540 IPR004107 Integrase, SAM-like, N-terminal RD05_RS07540 IPR010998 Integrase/recombinase, N-terminal RD05_RS07540 IPR002104 Integrase, catalytic domain RD05_RS07540 IPR013762 Integrase-like, catalytic domain superfamily RD05_RS07540 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS07540 IPR023009 Tyrosine recombinase XerC/XerD RD05_RS07545 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RD05_RS07545 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily RD05_RS07545 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RD05_RS07550 IPR021196 PdxT/SNO family, conserved site RD05_RS07550 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO RD05_RS07550 IPR029062 Class I glutamine amidotransferase-like RD05_RS07565 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RD05_RS07565 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RD05_RS07565 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS07575 IPR011701 Major facilitator superfamily RD05_RS07575 IPR020846 Major facilitator superfamily domain RD05_RS07575 IPR036259 MFS transporter superfamily RD05_RS07575 IPR005829 Sugar transporter, conserved site RD05_RS07585 IPR014152 DNA helicase subunit AddA RD05_RS07585 IPR011335 Restriction endonuclease type II-like RD05_RS07585 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type RD05_RS07585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07585 IPR034739 UvrD/AddA helicase, N-terminal RD05_RS07585 IPR014016 UvrD-like helicase, ATP-binding domain RD05_RS07585 IPR000212 DNA helicase, UvrD/REP type RD05_RS07585 IPR014017 UvrD-like DNA helicase, C-terminal RD05_RS07585 IPR011604 Exonuclease, phage-type/RecB, C-terminal RD05_RS07595 IPR001270 ClpA/B family RD05_RS07595 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD05_RS07595 IPR003593 AAA+ ATPase domain RD05_RS07595 IPR021029 DNA polymerase III, tau subunit, domain V RD05_RS07595 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily RD05_RS07595 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07595 IPR022754 DNA polymerase III, gamma subunit, domain III RD05_RS07595 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV RD05_RS07595 IPR012763 DNA polymerase III, subunit gamma/ tau RD05_RS07600 IPR004401 Nucleoid-associated protein YbaB/EbfC family RD05_RS07600 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily RD05_RS07605 IPR023627 Recombination protein RecR RD05_RS07605 IPR000093 DNA recombination protein RecR RD05_RS07605 IPR006171 TOPRIM domain RD05_RS07605 IPR023628 Recombination protein RecR, C4-type zinc finger RD05_RS07605 IPR034137 RecR, TOPRIM domain RD05_RS07625 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RD05_RS07630 IPR006070 YrdC-like domain RD05_RS07630 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RD05_RS07665 IPR029039 Flavoprotein-like superfamily RD05_RS07665 IPR005025 NADPH-dependent FMN reductase-like RD05_RS07670 IPR025543 Dodecin-like RD05_RS07670 IPR036694 Dodecin-like superfamily RD05_RS07670 IPR009923 Dodecin RD05_RS07675 IPR005748 DNA mismatch repair protein MutS RD05_RS07675 IPR036187 DNA mismatch repair protein MutS, core domain superfamily RD05_RS07675 IPR007696 DNA mismatch repair protein MutS, core RD05_RS07675 IPR016151 DNA mismatch repair protein MutS, N-terminal RD05_RS07675 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RD05_RS07675 IPR017261 DNA mismatch repair protein MutS/MSH RD05_RS07675 IPR000432 DNA mismatch repair protein MutS, C-terminal RD05_RS07675 IPR007861 DNA mismatch repair protein MutS, clamp RD05_RS07675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07675 IPR036678 MutS, connector domain superfamily RD05_RS07675 IPR007860 DNA mismatch repair protein MutS, connector domain RD05_RS07680 IPR039994 JmjC domain-containing RD05_RS07680 IPR003347 JmjC domain RD05_RS07685 IPR008966 Adhesion domain superfamily RD05_RS07685 IPR036937 Fimbrial-type adhesion domain superfamily RD05_RS07685 IPR039458 FimA-like RD05_RS07690 IPR010653 NlpB/DapX lipoprotein RD05_RS07690 IPR014524 Outer membrane protein assembly factor BamC RD05_RS07690 IPR042268 Outer membrane protein assembly factor BamC, C-terminal RD05_RS07695 IPR020624 Schiff base-forming aldolase, conserved site RD05_RS07695 IPR020625 Schiff base-forming aldolase, active site RD05_RS07695 IPR002220 DapA-like RD05_RS07695 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RD05_RS07695 IPR013785 Aldolase-type TIM barrel RD05_RS07700 IPR008915 Peptidase M50 RD05_RS07710 IPR018313 Solute-binding protein family 3, conserved site RD05_RS07710 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS07710 IPR001320 Ionotropic glutamate receptor RD05_RS07715 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS07715 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS07715 IPR035906 MetI-like superfamily RD05_RS07720 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS07720 IPR003593 AAA+ ATPase domain RD05_RS07720 IPR003439 ABC transporter-like RD05_RS07720 IPR017871 ABC transporter, conserved site RD05_RS07720 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07725 IPR004811 RelA/SpoT family RD05_RS07725 IPR002912 ACT domain RD05_RS07725 IPR007685 RelA/SpoT RD05_RS07725 IPR004095 TGS RD05_RS07725 IPR012676 TGS-like RD05_RS07725 IPR033655 RelA, TGS domain RD05_RS07725 IPR012675 Beta-grasp domain superfamily RD05_RS07725 IPR003607 HD/PDEase domain RD05_RS07730 IPR006110 RNA polymerase, subunit omega/K/RPB6 RD05_RS07730 IPR012293 RNA polymerase subunit, RPB6/omega RD05_RS07730 IPR036161 RPB6/omega subunit-like superfamily RD05_RS07730 IPR003716 DNA-directed RNA polymerase, omega subunit RD05_RS07735 IPR017665 Guanylate kinase RD05_RS07735 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RD05_RS07735 IPR008144 Guanylate kinase-like domain RD05_RS07735 IPR020590 Guanylate kinase, conserved site RD05_RS07735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07740 IPR036909 Cytochrome c-like domain superfamily RD05_RS07740 IPR009056 Cytochrome c-like domain RD05_RS07745 IPR009056 Cytochrome c-like domain RD05_RS07745 IPR036909 Cytochrome c-like domain superfamily RD05_RS07745 IPR024167 Cytochrome c4-like RD05_RS07750 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS07750 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS07750 IPR036291 NAD(P)-binding domain superfamily RD05_RS07755 IPR000064 Endopeptidase, NLPC/P60 domain RD05_RS07755 IPR038765 Papain-like cysteine peptidase superfamily RD05_RS07760 IPR035994 Nucleoside phosphorylase superfamily RD05_RS07760 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily RD05_RS07760 IPR018953 AMP nucleoside phosphorylase, N-terminal RD05_RS07760 IPR011271 AMP nucleosidase RD05_RS07760 IPR000845 Nucleoside phosphorylase domain RD05_RS07780 IPR013527 YicC-like, N-terminal RD05_RS07780 IPR013551 Domain of unknown function DUF1732 RD05_RS07780 IPR005229 Conserved hypothetical protein CHP00255 RD05_RS07785 IPR002381 Ribonuclease PH, bacterial-type RD05_RS07785 IPR018336 Ribonuclease PH, conserved site RD05_RS07785 IPR001247 Exoribonuclease, phosphorolytic domain 1 RD05_RS07785 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS07785 IPR027408 PNPase/RNase PH domain superfamily RD05_RS07785 IPR015847 Exoribonuclease, phosphorolytic domain 2 RD05_RS07785 IPR036345 Exoribonuclease, PH domain 2 superfamily RD05_RS07795 IPR005119 LysR, substrate-binding RD05_RS07795 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07795 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07795 IPR000847 Transcription regulator HTH, LysR RD05_RS07800 IPR001633 EAL domain RD05_RS07800 IPR035919 EAL domain superfamily RD05_RS07800 IPR000160 GGDEF domain RD05_RS07800 IPR003660 HAMP domain RD05_RS07800 IPR029787 Nucleotide cyclase RD05_RS07800 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 RD05_RS07805 IPR020922 dITP/XTP pyrophosphatase RD05_RS07805 IPR029001 Inosine triphosphate pyrophosphatase-like RD05_RS07805 IPR002637 Ham1-like protein RD05_RS07815 IPR004559 Heme chaperone HemW-like RD05_RS07815 IPR007197 Radical SAM RD05_RS07815 IPR010723 HemN, C-terminal RD05_RS07815 IPR006638 Elp3/MiaB/NifB RD05_RS07815 IPR023404 Radical SAM, alpha/beta horseshoe RD05_RS07815 IPR034505 Anaerobic coproporphyrinogen-III oxidase RD05_RS07820 IPR008147 Glutamine synthetase, beta-Grasp domain RD05_RS07820 IPR036651 Glutamine synthetase, N-terminal domain superfamily RD05_RS07820 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RD05_RS07820 IPR027303 Glutamine synthetase, glycine-rich site RD05_RS07820 IPR008146 Glutamine synthetase, catalytic domain RD05_RS07820 IPR001637 Glutamine synthetase class-I, adenylation site RD05_RS07820 IPR027302 Glutamine synthetase, N-terminal conserved site RD05_RS07820 IPR004809 Glutamine synthetase type I RD05_RS07825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS07825 IPR013767 PAS fold RD05_RS07825 IPR035965 PAS domain superfamily RD05_RS07825 IPR000014 PAS domain RD05_RS07825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS07825 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS07825 IPR005467 Histidine kinase domain RD05_RS07825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS07825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS07830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07830 IPR003593 AAA+ ATPase domain RD05_RS07830 IPR011006 CheY-like superfamily RD05_RS07830 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS07830 IPR009057 Homeobox-like domain superfamily RD05_RS07830 IPR002197 DNA binding HTH domain, Fis-type RD05_RS07830 IPR001789 Signal transduction response regulator, receiver domain RD05_RS07830 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD05_RS07830 IPR025944 Sigma-54 interaction domain, conserved site RD05_RS07830 IPR010114 DNA-binding transcriptional regulator NtrC RD05_RS07830 IPR002078 RNA polymerase sigma factor 54 interaction domain RD05_RS07835 IPR005119 LysR, substrate-binding RD05_RS07835 IPR000847 Transcription regulator HTH, LysR RD05_RS07835 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07835 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07840 IPR012093 Pirin RD05_RS07840 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain RD05_RS07840 IPR014710 RmlC-like jelly roll fold RD05_RS07840 IPR003829 Pirin, N-terminal domain RD05_RS07840 IPR011051 RmlC-like cupin domain superfamily RD05_RS07845 IPR011051 RmlC-like cupin domain superfamily RD05_RS07845 IPR014710 RmlC-like jelly roll fold RD05_RS07845 IPR003829 Pirin, N-terminal domain RD05_RS07845 IPR012093 Pirin RD05_RS07845 IPR008778 Pirin, C-terminal domain RD05_RS07855 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07855 IPR013611 Transport-associated OB, type 2 RD05_RS07855 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit RD05_RS07855 IPR017871 ABC transporter, conserved site RD05_RS07855 IPR003593 AAA+ ATPase domain RD05_RS07855 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS07855 IPR003439 ABC transporter-like RD05_RS07860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS07860 IPR035906 MetI-like superfamily RD05_RS07865 IPR026045 Ferric binding protein RD05_RS07870 IPR033892 Ferredoxin--NADP reductase, bacteria RD05_RS07870 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS07870 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS07870 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS07870 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS07870 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS07870 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS07875 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07875 IPR000847 Transcription regulator HTH, LysR RD05_RS07875 IPR005119 LysR, substrate-binding RD05_RS07875 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07885 IPR018170 Aldo/keto reductase, conserved site RD05_RS07885 IPR023210 NADP-dependent oxidoreductase domain RD05_RS07885 IPR020471 Aldo/keto reductase RD05_RS07885 IPR036812 NADP-dependent oxidoreductase domain superfamily RD05_RS07895 IPR006056 RidA family RD05_RS07895 IPR006175 YjgF/YER057c/UK114 family RD05_RS07895 IPR035959 RutC-like superfamily RD05_RS07895 IPR019897 RidA, conserved site RD05_RS07900 IPR001650 Helicase, C-terminal RD05_RS07900 IPR012340 Nucleic acid-binding, OB-fold RD05_RS07900 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS07900 IPR011545 DEAD/DEAH box helicase domain RD05_RS07900 IPR004609 ATP-dependent DNA helicase RecG RD05_RS07900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07900 IPR033454 RecG, wedge domain RD05_RS07905 IPR000847 Transcription regulator HTH, LysR RD05_RS07905 IPR005119 LysR, substrate-binding RD05_RS07905 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07905 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07910 IPR000847 Transcription regulator HTH, LysR RD05_RS07910 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS07910 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS07910 IPR005119 LysR, substrate-binding RD05_RS07915 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD05_RS07915 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS07915 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS07915 IPR015590 Aldehyde dehydrogenase domain RD05_RS07915 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS07915 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS07920 IPR002177 DNA-binding protein Dps RD05_RS07920 IPR023188 DNA-binding protein Dps, conserved site RD05_RS07920 IPR012347 Ferritin-like RD05_RS07920 IPR009078 Ferritin-like superfamily RD05_RS07920 IPR008331 Ferritin/DPS protein domain RD05_RS07945 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07945 IPR017871 ABC transporter, conserved site RD05_RS07945 IPR003593 AAA+ ATPase domain RD05_RS07945 IPR003439 ABC transporter-like RD05_RS07955 IPR001296 Glycosyl transferase, family 1 RD05_RS07965 IPR003715 Polysaccharide export protein RD05_RS07970 IPR036291 NAD(P)-binding domain superfamily RD05_RS07970 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RD05_RS07970 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD05_RS07970 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RD05_RS07970 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD05_RS07970 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD05_RS07970 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS07970 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD05_RS07975 IPR001509 NAD-dependent epimerase/dehydratase RD05_RS07975 IPR036291 NAD(P)-binding domain superfamily RD05_RS07980 IPR007833 Capsule polysaccharide biosynthesis RD05_RS07985 IPR007833 Capsule polysaccharide biosynthesis RD05_RS07995 IPR036291 NAD(P)-binding domain superfamily RD05_RS07995 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS07995 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08010 IPR028202 Reductase, C-terminal RD05_RS08010 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RD05_RS08010 IPR023753 FAD/NAD(P)-binding domain RD05_RS08010 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS08020 IPR003439 ABC transporter-like RD05_RS08020 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS08020 IPR003593 AAA+ ATPase domain RD05_RS08020 IPR017871 ABC transporter, conserved site RD05_RS08020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08025 IPR017871 ABC transporter, conserved site RD05_RS08025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08025 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS08025 IPR003439 ABC transporter-like RD05_RS08025 IPR003593 AAA+ ATPase domain RD05_RS08030 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RD05_RS08030 IPR001851 ABC transporter, permease RD05_RS08040 IPR005496 Integral membrane protein TerC RD05_RS08040 IPR022301 Integral membrane protein YjbE RD05_RS08045 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS08045 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08045 IPR036291 NAD(P)-binding domain superfamily RD05_RS08050 IPR005064 Bordetella uptake gene RD05_RS08050 IPR042100 Bordetella uptake gene, domain 1 RD05_RS08065 IPR011703 ATPase, AAA-3 RD05_RS08065 IPR041628 ChlI/MoxR, AAA lid domain RD05_RS08065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08095 IPR024607 Sulfatase, conserved site RD05_RS08095 IPR017850 Alkaline-phosphatase-like, core domain superfamily RD05_RS08095 IPR000917 Sulfatase, N-terminal RD05_RS08120 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS08120 IPR001789 Signal transduction response regulator, receiver domain RD05_RS08120 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS08120 IPR011006 CheY-like superfamily RD05_RS08125 IPR015500 Peptidase S8, subtilisin-related RD05_RS08125 IPR034061 Autotransporter serine protease peptidase domain RD05_RS08125 IPR023828 Peptidase S8, subtilisin, Ser-active site RD05_RS08125 IPR022398 Peptidase S8, subtilisin, His-active site RD05_RS08125 IPR036852 Peptidase S8/S53 domain superfamily RD05_RS08125 IPR011050 Pectin lyase fold/virulence factor RD05_RS08125 IPR006315 Outer membrane autotransporter barrel RD05_RS08125 IPR013425 Autotransporter-associated beta strand repeat RD05_RS08125 IPR036709 Autotransporter beta-domain superfamily RD05_RS08125 IPR000209 Peptidase S8/S53 domain RD05_RS08125 IPR005546 Autotransporter beta-domain RD05_RS08130 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS08130 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RD05_RS08130 IPR032758 Antitoxin MqsA/HigA-2 RD05_RS08135 IPR009387 Toxin HigB-2 RD05_RS08140 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RD05_RS08140 IPR040079 Glutathione Transferase family RD05_RS08140 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS08140 IPR004045 Glutathione S-transferase, N-terminal RD05_RS08140 IPR004046 Glutathione S-transferase, C-terminal RD05_RS08140 IPR036249 Thioredoxin-like superfamily RD05_RS08145 IPR042098 Taurine dioxygenase TauD-like superfamily RD05_RS08145 IPR003819 TauD/TfdA-like domain RD05_RS08155 IPR042100 Bordetella uptake gene, domain 1 RD05_RS08155 IPR005064 Bordetella uptake gene RD05_RS08160 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08160 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS08160 IPR036291 NAD(P)-binding domain superfamily RD05_RS08160 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS08165 IPR000262 FMN-dependent dehydrogenase RD05_RS08165 IPR037396 FMN hydroxy acid dehydrogenase domain RD05_RS08165 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD05_RS08165 IPR013785 Aldolase-type TIM barrel RD05_RS08165 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD05_RS08170 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RD05_RS08170 IPR011234 Fumarylacetoacetase-like, C-terminal RD05_RS08175 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08175 IPR036291 NAD(P)-binding domain superfamily RD05_RS08175 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS08180 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS08180 IPR011283 Acetoacetyl-CoA reductase RD05_RS08180 IPR036291 NAD(P)-binding domain superfamily RD05_RS08180 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08185 IPR005064 Bordetella uptake gene RD05_RS08185 IPR042100 Bordetella uptake gene, domain 1 RD05_RS08190 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08190 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain RD05_RS08190 IPR005119 LysR, substrate-binding RD05_RS08190 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08190 IPR000847 Transcription regulator HTH, LysR RD05_RS08195 IPR005064 Bordetella uptake gene RD05_RS08195 IPR042100 Bordetella uptake gene, domain 1 RD05_RS08220 IPR005025 NADPH-dependent FMN reductase-like RD05_RS08220 IPR029039 Flavoprotein-like superfamily RD05_RS08220 IPR014063 Arsenate resistance ArsH RD05_RS08245 IPR005064 Bordetella uptake gene RD05_RS08245 IPR042100 Bordetella uptake gene, domain 1 RD05_RS08250 IPR036291 NAD(P)-binding domain superfamily RD05_RS08250 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08250 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS08255 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08255 IPR005119 LysR, substrate-binding RD05_RS08255 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08255 IPR000847 Transcription regulator HTH, LysR RD05_RS08270 IPR042100 Bordetella uptake gene, domain 1 RD05_RS08270 IPR005064 Bordetella uptake gene RD05_RS08275 IPR005281 Monovalent cation:proton antiporter, subunit B RD05_RS08275 IPR025383 Domain of unknown function DUF4040 RD05_RS08275 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RD05_RS08275 IPR005663 Monovalent cation proton antiporter subunit A RD05_RS08275 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RD05_RS08275 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RD05_RS08280 IPR006673 Mnh complex subunit C1 RD05_RS08280 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RD05_RS08285 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RD05_RS08285 IPR004775 Na(+)/H(+) antiporter subunit D1 RD05_RS08290 IPR002758 Na+/H+ antiporter subunit E RD05_RS08290 IPR004847 Na(+)/H(+) antiporter subunit E1 RD05_RS08295 IPR007208 Na(+)/H(+) antiporter subunit F-like RD05_RS08320 IPR016192 APOBEC/CMP deaminase, zinc-binding RD05_RS08320 IPR002125 Cytidine and deoxycytidylate deaminase domain RD05_RS08320 IPR016193 Cytidine deaminase-like RD05_RS08320 IPR028883 tRNA-specific adenosine deaminase RD05_RS08325 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily RD05_RS08325 IPR029062 Class I glutamine amidotransferase-like RD05_RS08325 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal RD05_RS08325 IPR040449 LD-carboxypeptidase, N-terminal RD05_RS08325 IPR003507 Peptidase family S66 RD05_RS08325 IPR040921 LD-carboxypeptidase, C-terminal RD05_RS08330 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS08330 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS08330 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS08330 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS08335 IPR004681 TRAP transporter large membrane protein DctM RD05_RS08335 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS08345 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS08345 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS08345 IPR026289 Solute binding protein, TakP-like RD05_RS08345 IPR041721 Lactate-binding periplasmic protein TTHA0766 RD05_RS08345 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS08350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08350 IPR003593 AAA+ ATPase domain RD05_RS08350 IPR032781 ABC-transporter extension domain RD05_RS08350 IPR003439 ABC transporter-like RD05_RS08355 IPR003439 ABC transporter-like RD05_RS08355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08355 IPR003593 AAA+ ATPase domain RD05_RS08390 IPR023950 Flavohemoprotein RD05_RS08390 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS08390 IPR000971 Globin RD05_RS08390 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS08390 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS08390 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS08390 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS08390 IPR012292 Globin/Protoglobin RD05_RS08390 IPR009050 Globin-like superfamily RD05_RS08395 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08395 IPR023761 Transcriptional repressor HTH, NsrR RD05_RS08395 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08395 IPR000944 Transcription regulator Rrf2-type RD05_RS08400 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS08400 IPR023080 D-amino acid dehydrogenase DadA RD05_RS08400 IPR006076 FAD dependent oxidoreductase RD05_RS08415 IPR006222 Aminomethyltransferase, folate-binding domain RD05_RS08415 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RD05_RS08415 IPR023758 tRNA-modifying protein YgfZ RD05_RS08415 IPR017703 YgfZ/GcvT conserved site RD05_RS08420 IPR003770 Endolytic murein transglycosylase RD05_RS08425 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08425 IPR039430 Thymidylate kinase-like domain RD05_RS08425 IPR018094 Thymidylate kinase RD05_RS08430 IPR001270 ClpA/B family RD05_RS08430 IPR022754 DNA polymerase III, gamma subunit, domain III RD05_RS08430 IPR003593 AAA+ ATPase domain RD05_RS08430 IPR012763 DNA polymerase III, subunit gamma/ tau RD05_RS08430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08430 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD05_RS08435 IPR001130 TatD family RD05_RS08435 IPR032466 Metal-dependent hydrolase RD05_RS08435 IPR015991 Uncharacterised hydrolase TatD-type RD05_RS08435 IPR018228 Deoxyribonuclease, TatD-related, conserved site RD05_RS08450 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS08450 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter RD05_RS08450 IPR001320 Ionotropic glutamate receptor RD05_RS08450 IPR018313 Solute-binding protein family 3, conserved site RD05_RS08460 IPR017871 ABC transporter, conserved site RD05_RS08460 IPR003439 ABC transporter-like RD05_RS08460 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS08460 IPR003593 AAA+ ATPase domain RD05_RS08460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08465 IPR005923 Formiminoglutamase RD05_RS08465 IPR006035 Ureohydrolase RD05_RS08465 IPR020855 Ureohydrolase, manganese-binding site RD05_RS08465 IPR023696 Ureohydrolase domain superfamily RD05_RS08470 IPR036291 NAD(P)-binding domain superfamily RD05_RS08470 IPR033922 NAD(P) binding domain of glutamate dehydrogenase RD05_RS08470 IPR014362 Glutamate dehydrogenase RD05_RS08470 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RD05_RS08470 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RD05_RS08470 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RD05_RS08470 IPR033524 Leu/Phe/Val dehydrogenases active site RD05_RS08475 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS08475 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS08475 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS08475 IPR015590 Aldehyde dehydrogenase domain RD05_RS08475 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS08475 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS08480 IPR011650 Peptidase M20, dimerisation domain RD05_RS08480 IPR002933 Peptidase M20 RD05_RS08480 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS08480 IPR010158 Amidase, carbamoylase-type RD05_RS08485 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS08485 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS08485 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS08485 IPR029061 Thiamin diphosphate-binding fold RD05_RS08485 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS08485 IPR000399 TPP-binding enzyme, conserved site RD05_RS08485 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS08485 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS08495 IPR004681 TRAP transporter large membrane protein DctM RD05_RS08495 IPR007387 TRAP transporter, small membrane protein DctQ RD05_RS08495 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS08505 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS08505 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS08505 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS08505 IPR007387 TRAP transporter, small membrane protein DctQ RD05_RS08505 IPR004682 TRAP transporter solute receptor, DctP family RD05_RS08510 IPR011711 GntR, C-terminal RD05_RS08510 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS08510 IPR000524 Transcription regulator HTH, GntR RD05_RS08510 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08510 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08520 IPR007438 Protein of unknown function DUF488 RD05_RS08540 IPR000120 Amidase RD05_RS08540 IPR023631 Amidase signature domain RD05_RS08540 IPR036928 Amidase signature (AS) superfamily RD05_RS08545 IPR016938 Uncharacterised protein family UPF0317 RD05_RS08545 IPR038021 Putative hydro-lyase RD05_RS08545 IPR009906 D-glutamate cyclase RD05_RS08555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS08555 IPR000700 PAS-associated, C-terminal RD05_RS08555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS08555 IPR036641 HPT domain superfamily RD05_RS08555 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS08555 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS08555 IPR000014 PAS domain RD05_RS08555 IPR005467 Histidine kinase domain RD05_RS08555 IPR035965 PAS domain superfamily RD05_RS08555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS08555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS08555 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RD05_RS08555 IPR001789 Signal transduction response regulator, receiver domain RD05_RS08555 IPR011006 CheY-like superfamily RD05_RS08555 IPR013767 PAS fold RD05_RS08560 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS08560 IPR001789 Signal transduction response regulator, receiver domain RD05_RS08560 IPR011006 CheY-like superfamily RD05_RS08565 IPR008619 Filamentous haemagglutinin repeat RD05_RS08565 IPR024973 ESPR domain RD05_RS08565 IPR008638 Filamentous haemagglutinin, N-terminal RD05_RS08565 IPR011050 Pectin lyase fold/virulence factor RD05_RS08565 IPR012334 Pectin lyase fold RD05_RS08565 IPR025157 Hemagglutinin repeat RD05_RS08570 IPR008966 Adhesion domain superfamily RD05_RS08570 IPR039458 FimA-like RD05_RS08570 IPR036937 Fimbrial-type adhesion domain superfamily RD05_RS08575 IPR016148 Pili assembly chaperone, C-terminal RD05_RS08575 IPR016147 Pili assembly chaperone, N-terminal RD05_RS08575 IPR018046 Pili assembly chaperone, conserved site RD05_RS08575 IPR001829 Pili assembly chaperone, bacterial RD05_RS08575 IPR036316 Pili assembly chaperone, C-terminal domain superfamily RD05_RS08575 IPR008962 PapD-like superfamily RD05_RS08575 IPR013783 Immunoglobulin-like fold RD05_RS08580 IPR000015 Outer membrane usher protein RD05_RS08580 IPR025949 PapC-like, C-terminal domain RD05_RS08580 IPR042186 Outer membrane usher protein FimD, plug domain RD05_RS08580 IPR018030 Fimbrial membrane usher, conserved site RD05_RS08580 IPR037224 PapC, N-terminal domain superfamily RD05_RS08580 IPR025885 PapC, N-terminal domain RD05_RS08585 IPR008966 Adhesion domain superfamily RD05_RS08585 IPR000259 Fimbrial-type adhesion domain RD05_RS08585 IPR036937 Fimbrial-type adhesion domain superfamily RD05_RS08590 IPR035251 ShlB, POTRA domain RD05_RS08590 IPR027282 Two partner secretion pathway transporter RD05_RS08590 IPR005565 Haemolysin activator HlyB, C-terminal RD05_RS08590 IPR013686 Polypeptide-transport-associated, ShlB-type RD05_RS08590 IPR034746 POTRA domain RD05_RS08605 IPR004682 TRAP transporter solute receptor, DctP family RD05_RS08605 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS08605 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS08630 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08630 IPR005119 LysR, substrate-binding RD05_RS08630 IPR000847 Transcription regulator HTH, LysR RD05_RS08630 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08640 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD05_RS08640 IPR002821 Hydantoinase A/oxoprolinase RD05_RS08655 IPR006685 Mechanosensitive ion channel MscS RD05_RS08655 IPR008910 Conserved TM helix RD05_RS08655 IPR011066 Mechanosensitive ion channel MscS, C-terminal RD05_RS08655 IPR023408 Mechanosensitive ion channel MscS domain superfamily RD05_RS08655 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RD05_RS08655 IPR006686 Mechanosensitive ion channel MscS, conserved site RD05_RS08655 IPR010920 LSM domain superfamily RD05_RS08665 IPR042100 Bordetella uptake gene, domain 1 RD05_RS08665 IPR005064 Bordetella uptake gene RD05_RS08670 IPR029028 Alpha/beta knot methyltransferases RD05_RS08670 IPR004384 RNA methyltransferase TrmJ/LasT RD05_RS08670 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD05_RS08670 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS08675 IPR000760 Inositol monophosphatase-like RD05_RS08675 IPR020583 Inositol monophosphatase, metal-binding site RD05_RS08675 IPR033942 Inositol monophosphatase RD05_RS08675 IPR022337 Inositol monophosphatase, SuhB RD05_RS08675 IPR020550 Inositol monophosphatase, conserved site RD05_RS08680 IPR005170 Transporter-associated domain RD05_RS08680 IPR005496 Integral membrane protein TerC RD05_RS08680 IPR016169 FAD-binding, type PCMH, subdomain 2 RD05_RS08680 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS08680 IPR000644 CBS domain RD05_RS08685 IPR003824 Undecaprenyl-diphosphatase UppP RD05_RS08690 IPR010138 UDP-2,3-diacylglucosamine hydrolase RD05_RS08690 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RD05_RS08695 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RD05_RS08695 IPR029000 Cyclophilin-like domain superfamily RD05_RS08695 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RD05_RS08695 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RD05_RS08705 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RD05_RS08705 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RD05_RS08705 IPR015803 Cysteine-tRNA ligase RD05_RS08705 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RD05_RS08705 IPR032678 tRNA synthetases class I, catalytic domain RD05_RS08705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS08710 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RD05_RS08710 IPR035451 Ada-like domain superfamily RD05_RS08710 IPR004026 Ada DNA repair, metal-binding RD05_RS08710 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD05_RS08710 IPR018062 HTH domain AraC-type, conserved site RD05_RS08710 IPR018060 DNA binding HTH domain, AraC-type RD05_RS08710 IPR009057 Homeobox-like domain superfamily RD05_RS08710 IPR003265 HhH-GPD domain RD05_RS08710 IPR011257 DNA glycosylase RD05_RS08710 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily RD05_RS08715 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RD05_RS08715 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS08715 IPR001095 Acetyl-CoA carboxylase, alpha subunit RD05_RS08725 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain RD05_RS08725 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RD05_RS08725 IPR012094 tRNA(Ile)-lysidine synthase RD05_RS08725 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal RD05_RS08725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS08730 IPR027795 CASTOR, ACT domain RD05_RS08730 IPR018042 Aspartate kinase, conserved site RD05_RS08730 IPR001341 Aspartate kinase RD05_RS08730 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS08730 IPR041740 Aspartokinase catalytic domain RD05_RS08730 IPR002912 ACT domain RD05_RS08730 IPR005260 Aspartate kinase, monofunctional class RD05_RS08730 IPR036393 Acetylglutamate kinase-like superfamily RD05_RS08755 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS08755 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS08755 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS08755 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS08755 IPR036291 NAD(P)-binding domain superfamily RD05_RS08755 IPR026578 L-carnitine dehydrogenase RD05_RS08760 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS08760 IPR004681 TRAP transporter large membrane protein DctM RD05_RS08760 IPR007387 TRAP transporter, small membrane protein DctQ RD05_RS08765 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS08765 IPR004681 TRAP transporter large membrane protein DctM RD05_RS08770 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS08770 IPR004682 TRAP transporter solute receptor, DctP family RD05_RS08770 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS08775 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS08775 IPR029058 Alpha/Beta hydrolase fold RD05_RS08775 IPR019913 Pyrimidine utilisation protein RutD RD05_RS08780 IPR036291 NAD(P)-binding domain superfamily RD05_RS08780 IPR002811 Aspartate dehydrogenase RD05_RS08780 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD05_RS08780 IPR011182 L-aspartate dehydrogenase RD05_RS08780 IPR020626 L-aspartate dehydrogenase, prokaryotic RD05_RS08785 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08785 IPR036291 NAD(P)-binding domain superfamily RD05_RS08785 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS08795 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08795 IPR005119 LysR, substrate-binding RD05_RS08795 IPR000847 Transcription regulator HTH, LysR RD05_RS08795 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08795 IPR037414 Transcriptional activator protein LysR, PBP2 domain RD05_RS08815 IPR035906 MetI-like superfamily RD05_RS08815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS08820 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS08820 IPR035906 MetI-like superfamily RD05_RS08820 IPR011867 Molybdate ABC transporter, permease protein RD05_RS08820 IPR006469 NifC-like ABC-type porter RD05_RS08825 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit RD05_RS08825 IPR013611 Transport-associated OB, type 2 RD05_RS08825 IPR003593 AAA+ ATPase domain RD05_RS08825 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA RD05_RS08825 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08825 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS08825 IPR017871 ABC transporter, conserved site RD05_RS08825 IPR003439 ABC transporter-like RD05_RS08835 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD05_RS08835 IPR013785 Aldolase-type TIM barrel RD05_RS08835 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS08835 IPR023753 FAD/NAD(P)-binding domain RD05_RS08840 IPR029016 GAF-like domain superfamily RD05_RS08840 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RD05_RS08840 IPR014757 Transcription regulator IclR, C-terminal RD05_RS08840 IPR005471 Transcription regulator IclR, N-terminal RD05_RS08840 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08840 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08845 IPR036291 NAD(P)-binding domain superfamily RD05_RS08845 IPR003781 CoA-binding RD05_RS08850 IPR005064 Bordetella uptake gene RD05_RS08850 IPR042100 Bordetella uptake gene, domain 1 RD05_RS08855 IPR006175 YjgF/YER057c/UK114 family RD05_RS08855 IPR035959 RutC-like superfamily RD05_RS08855 IPR019898 Putative aminoacrylate peracid reductase RutC RD05_RS08880 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD05_RS08880 IPR013785 Aldolase-type TIM barrel RD05_RS08890 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA RD05_RS08890 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS08890 IPR001173 Glycosyltransferase 2-like RD05_RS08895 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS08895 IPR002509 NodB homology domain RD05_RS08895 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB RD05_RS08895 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal RD05_RS08915 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08915 IPR000835 MarR-type HTH domain RD05_RS08915 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08930 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD05_RS08930 IPR016066 Alpha-D-phosphohexomutase, conserved site RD05_RS08930 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD05_RS08930 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD05_RS08930 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD05_RS08930 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RD05_RS08930 IPR005841 Alpha-D-phosphohexomutase superfamily RD05_RS08930 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD05_RS08935 IPR035476 Phosphoglucose isomerase, SIS domain 1 RD05_RS08935 IPR001672 Phosphoglucose isomerase (PGI) RD05_RS08935 IPR023096 Phosphoglucose isomerase, C-terminal RD05_RS08935 IPR035482 Phosphoglucose isomerase, SIS domain 2 RD05_RS08935 IPR018189 Phosphoglucose isomerase, conserved site RD05_RS08940 IPR001451 Hexapeptide repeat RD05_RS08940 IPR042122 Serine acetyltransferase, N-terminal domain superfamily RD05_RS08940 IPR011004 Trimeric LpxA-like superfamily RD05_RS08950 IPR026591 Sirtuin, catalytic core small domain superfamily RD05_RS08950 IPR003000 Sirtuin family RD05_RS08950 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS08950 IPR026587 Sirtuin, class II RD05_RS08950 IPR026590 Sirtuin family, catalytic core domain RD05_RS08955 IPR020583 Inositol monophosphatase, metal-binding site RD05_RS08955 IPR033942 Inositol monophosphatase RD05_RS08955 IPR020550 Inositol monophosphatase, conserved site RD05_RS08955 IPR022337 Inositol monophosphatase, SuhB RD05_RS08955 IPR000760 Inositol monophosphatase-like RD05_RS08960 IPR010102 Succinate semialdehyde dehydrogenase RD05_RS08960 IPR015590 Aldehyde dehydrogenase domain RD05_RS08960 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS08960 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS08960 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS08960 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS08960 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS08965 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS08965 IPR004632 4-aminobutyrate aminotransferase, bacterial RD05_RS08965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS08965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS08965 IPR005814 Aminotransferase class-III RD05_RS08970 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS08970 IPR000524 Transcription regulator HTH, GntR RD05_RS08970 IPR004839 Aminotransferase, class I/classII RD05_RS08970 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS08970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS08970 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS08980 IPR013986 DExx box DNA helicase domain superfamily RD05_RS08980 IPR034739 UvrD/AddA helicase, N-terminal RD05_RS08980 IPR014016 UvrD-like helicase, ATP-binding domain RD05_RS08980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08980 IPR000212 DNA helicase, UvrD/REP type RD05_RS08980 IPR005753 DNA helicase, ATP-dependent, UvrD type RD05_RS08980 IPR014017 UvrD-like DNA helicase, C-terminal RD05_RS08985 IPR004488 Magnesium/cobalt transport protein CorA RD05_RS08985 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RD05_RS08995 IPR011980 Nickel ABC transporter, substrate-binding protein NikA RD05_RS08995 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS08995 IPR039424 Solute-binding protein family 5 RD05_RS08995 IPR023765 Solute-binding protein family 5, conserved site RD05_RS08995 IPR000914 Solute-binding protein family 5 domain RD05_RS09000 IPR035906 MetI-like superfamily RD05_RS09000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS09005 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS09005 IPR035906 MetI-like superfamily RD05_RS09005 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS09010 IPR003593 AAA+ ATPase domain RD05_RS09010 IPR003439 ABC transporter-like RD05_RS09010 IPR017871 ABC transporter, conserved site RD05_RS09010 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS09010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09015 IPR000835 MarR-type HTH domain RD05_RS09015 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09015 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09015 IPR011991 ArsR-like helix-turn-helix domain RD05_RS09030 IPR005565 Haemolysin activator HlyB, C-terminal RD05_RS09030 IPR034746 POTRA domain RD05_RS09030 IPR013686 Polypeptide-transport-associated, ShlB-type RD05_RS09035 IPR001633 EAL domain RD05_RS09035 IPR035919 EAL domain superfamily RD05_RS09035 IPR000160 GGDEF domain RD05_RS09035 IPR005330 MHYT domain RD05_RS09035 IPR029787 Nucleotide cyclase RD05_RS09065 IPR007055 BON domain RD05_RS09065 IPR001775 GspD/PilQ family RD05_RS09065 IPR032789 Pilus formation protein, N-terminal RD05_RS09065 IPR004846 Type II/III secretion system RD05_RS09065 IPR014004 Transport-associated and nodulation domain, bacteria RD05_RS09075 IPR001482 Type II/IV secretion system protein RD05_RS09075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09075 IPR022399 Helicase/secretion neighbourhood ATPase RD05_RS09105 IPR025944 Sigma-54 interaction domain, conserved site RD05_RS09105 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD05_RS09105 IPR002078 RNA polymerase sigma factor 54 interaction domain RD05_RS09105 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS09105 IPR002197 DNA binding HTH domain, Fis-type RD05_RS09105 IPR009057 Homeobox-like domain superfamily RD05_RS09105 IPR011006 CheY-like superfamily RD05_RS09105 IPR003593 AAA+ ATPase domain RD05_RS09105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09105 IPR001789 Signal transduction response regulator, receiver domain RD05_RS09120 IPR014284 RNA polymerase sigma-70 like domain RD05_RS09120 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD05_RS09120 IPR039425 RNA polymerase sigma-70 like RD05_RS09120 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS09120 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS09120 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS09120 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS09120 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09120 IPR014294 RNA polymerase sigma-W, bacillaceae RD05_RS09130 IPR036909 Cytochrome c-like domain superfamily RD05_RS09130 IPR009056 Cytochrome c-like domain RD05_RS09130 IPR002327 Cytochrome c, class IA/ IB RD05_RS09135 IPR001059 Translation elongation factor P/YeiP, central RD05_RS09135 IPR013852 Translation elongation factor P/YeiP, conserved site RD05_RS09135 IPR015365 Elongation factor P, C-terminal RD05_RS09135 IPR012340 Nucleic acid-binding, OB-fold RD05_RS09135 IPR013185 Translation elongation factor, KOW-like RD05_RS09135 IPR011768 Translation elongation factor P RD05_RS09135 IPR020599 Translation elongation factor P/YeiP RD05_RS09135 IPR014722 Ribosomal protein L2, domain 2 RD05_RS09135 IPR008991 Translation protein SH3-like domain superfamily RD05_RS09150 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type RD05_RS09150 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RD05_RS09155 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RD05_RS09155 IPR036008 Aconitase, iron-sulfur domain RD05_RS09155 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD05_RS09155 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD05_RS09155 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RD05_RS09155 IPR006249 Aconitase/Iron-responsive element-binding protein 2 RD05_RS09155 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS09165 IPR039423 TonB-dependent receptor-like RD05_RS09165 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS09165 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS09165 IPR012910 TonB-dependent receptor, plug domain RD05_RS09165 IPR030149 TonB-dependent siderophore receptor FcuA/FatA RD05_RS09165 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS09165 IPR010105 TonB-dependent siderophore receptor RD05_RS09165 IPR010916 TonB box, conserved site RD05_RS09165 IPR010917 TonB-dependent receptor, conserved site RD05_RS09180 IPR036737 OmpA-like domain superfamily RD05_RS09180 IPR006664 Outer membrane protein, bacterial RD05_RS09180 IPR006665 OmpA-like domain RD05_RS09190 IPR036288 Aconitase B, HEAT-like domain superfamily RD05_RS09190 IPR015929 Aconitase B, swivel RD05_RS09190 IPR015933 Aconitase B, HEAT-like domain RD05_RS09190 IPR004406 Aconitase B RD05_RS09190 IPR036008 Aconitase, iron-sulfur domain RD05_RS09190 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD05_RS09190 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS09190 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RD05_RS09190 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD05_RS09190 IPR015932 Aconitase, domain 2 RD05_RS09215 IPR000620 EamA domain RD05_RS09220 IPR002781 Transmembrane protein TauE-like RD05_RS09235 IPR005119 LysR, substrate-binding RD05_RS09235 IPR000847 Transcription regulator HTH, LysR RD05_RS09235 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09235 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09240 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RD05_RS09240 IPR037171 NagB/RpiA transferase-like RD05_RS09240 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily RD05_RS09240 IPR003702 Acetyl-CoA hydrolase/transferase RD05_RS09240 IPR017821 Succinate CoA transferase RD05_RS09250 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 RD05_RS09250 IPR005119 LysR, substrate-binding RD05_RS09250 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09250 IPR000847 Transcription regulator HTH, LysR RD05_RS09250 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09285 IPR032710 NTF2-like domain superfamily RD05_RS09285 IPR023006 Uncharacterised protein family UPF0225 RD05_RS09295 IPR036291 NAD(P)-binding domain superfamily RD05_RS09295 IPR026578 L-carnitine dehydrogenase RD05_RS09295 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS09295 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS09295 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS09295 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS09300 IPR000120 Amidase RD05_RS09300 IPR020556 Amidase, conserved site RD05_RS09300 IPR023631 Amidase signature domain RD05_RS09300 IPR036928 Amidase signature (AS) superfamily RD05_RS09310 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS09310 IPR000965 GPR domain RD05_RS09310 IPR012134 Glutamate-5-semialdehyde dehydrogenase RD05_RS09310 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site RD05_RS09310 IPR015590 Aldehyde dehydrogenase domain RD05_RS09310 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS09310 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS09325 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD05_RS09325 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RD05_RS09325 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD05_RS09325 IPR015413 Methionyl/Leucyl tRNA synthetase RD05_RS09325 IPR002302 Leucine-tRNA ligase RD05_RS09325 IPR025709 Leucyl-tRNA synthetase, editing domain RD05_RS09325 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD05_RS09325 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS09325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS09330 IPR011701 Major facilitator superfamily RD05_RS09330 IPR020846 Major facilitator superfamily domain RD05_RS09330 IPR036259 MFS transporter superfamily RD05_RS09335 IPR023187 Transcriptional regulator MarR-type, conserved site RD05_RS09335 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09335 IPR000835 MarR-type HTH domain RD05_RS09335 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09355 IPR036513 STAS domain superfamily RD05_RS09355 IPR011547 SLC26A/SulP transporter domain RD05_RS09355 IPR002645 STAS domain RD05_RS09355 IPR001902 SLC26A/SulP transporter RD05_RS09360 IPR011332 Zinc-binding ribosomal protein RD05_RS09360 IPR038584 Ribosomal protein L33 superfamily RD05_RS09360 IPR001705 Ribosomal protein L33 RD05_RS09365 IPR001383 Ribosomal protein L28 RD05_RS09365 IPR034704 L28p-like RD05_RS09365 IPR026569 Ribosomal protein L28/L24 RD05_RS09365 IPR037147 Ribosomal protein L28/L24 superfamily RD05_RS09370 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RD05_RS09370 IPR011701 Major facilitator superfamily RD05_RS09370 IPR020846 Major facilitator superfamily domain RD05_RS09370 IPR036259 MFS transporter superfamily RD05_RS09370 IPR004734 Multidrug resistance protein RD05_RS09375 IPR003333 Mycolic acid cyclopropane synthase RD05_RS09375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS09390 IPR035906 MetI-like superfamily RD05_RS09390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS09395 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09395 IPR000644 CBS domain RD05_RS09395 IPR017871 ABC transporter, conserved site RD05_RS09395 IPR003439 ABC transporter-like RD05_RS09395 IPR003593 AAA+ ATPase domain RD05_RS09395 IPR005892 Glycine betaine transport ATP-binding subunit RD05_RS09400 IPR004370 4-oxalocrotonate tautomerase RD05_RS09400 IPR014347 Tautomerase/MIF superfamily RD05_RS09400 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type RD05_RS09405 IPR020617 Thiolase, C-terminal RD05_RS09405 IPR020610 Thiolase, active site RD05_RS09405 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS09405 IPR016039 Thiolase-like RD05_RS09405 IPR002155 Thiolase RD05_RS09405 IPR020616 Thiolase, N-terminal RD05_RS09415 IPR000485 AsnC-type HTH domain RD05_RS09415 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09415 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09415 IPR000524 Transcription regulator HTH, GntR RD05_RS09415 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS09415 IPR011711 GntR, C-terminal RD05_RS09425 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS09425 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS09425 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS09425 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS09435 IPR005064 Bordetella uptake gene RD05_RS09435 IPR042100 Bordetella uptake gene, domain 1 RD05_RS09440 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone RD05_RS09440 IPR001424 Superoxide dismutase, copper/zinc binding domain RD05_RS09440 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily RD05_RS09440 IPR018152 Superoxide dismutase, copper/zinc, binding site RD05_RS09455 IPR012693 ABC transporter, phosphonate import, PhnC RD05_RS09455 IPR003439 ABC transporter-like RD05_RS09455 IPR017871 ABC transporter, conserved site RD05_RS09455 IPR003593 AAA+ ATPase domain RD05_RS09455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09460 IPR004606 Molybdenum-pterin binding RD05_RS09460 IPR005116 Transport-associated OB, type 1 RD05_RS09460 IPR016462 Molybdate-dependent transcriptional regulator ModE RD05_RS09460 IPR000847 Transcription regulator HTH, LysR RD05_RS09460 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09460 IPR003725 Molybdenum-binding protein ModE, N-terminal RD05_RS09460 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS09460 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09480 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RD05_RS09480 IPR006143 RND efflux pump, membrane fusion protein RD05_RS09485 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS09485 IPR001036 Acriflavin resistance protein RD05_RS09485 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RD05_RS09490 IPR012640 Membrane lipoprotein, lipid attachment site RD05_RS09490 IPR003423 Outer membrane efflux protein RD05_RS09490 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD05_RS09495 IPR013785 Aldolase-type TIM barrel RD05_RS09495 IPR036130 Pyridoxine 5'-phosphate synthase RD05_RS09495 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ RD05_RS09500 IPR008278 4'-phosphopantetheinyl transferase domain RD05_RS09500 IPR037143 4'-phosphopantetheinyl transferase domain superfamily RD05_RS09500 IPR004568 Phosphopantetheine-protein transferase domain RD05_RS09500 IPR002582 Holo-[acyl carrier protein] synthase RD05_RS09505 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RD05_RS09505 IPR001764 Glycoside hydrolase, family 3, N-terminal RD05_RS09505 IPR022956 Beta-hexosaminidase, bacterial RD05_RS09505 IPR019800 Glycoside hydrolase, family 3, active site RD05_RS09505 IPR017853 Glycoside hydrolase superfamily RD05_RS09510 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD05_RS09510 IPR010994 RuvA domain 2-like RD05_RS09510 IPR001943 UVR domain RD05_RS09510 IPR036876 UVR domain superfamily RD05_RS09510 IPR038476 UvrC homology region 2 superfamily RD05_RS09510 IPR004791 UvrABC system, subunit C RD05_RS09510 IPR035901 GIY-YIG endonuclease superfamily RD05_RS09510 IPR000305 GIY-YIG endonuclease RD05_RS09510 IPR001162 UvrC family homology region RD05_RS09515 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RD05_RS09515 IPR000462 CDP-alcohol phosphatidyltransferase RD05_RS09530 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RD05_RS09530 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RD05_RS09530 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RD05_RS09535 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS09535 IPR006254 Isocitrate lyase RD05_RS09535 IPR039556 ICL/PEPM domain RD05_RS09535 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS09535 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RD05_RS09550 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RD05_RS09550 IPR001851 ABC transporter, permease RD05_RS09555 IPR001851 ABC transporter, permease RD05_RS09560 IPR028081 Leucine-binding protein domain RD05_RS09560 IPR028082 Periplasmic binding protein-like I RD05_RS09560 IPR000709 Leu/Ile/Val-binding protein RD05_RS09565 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RD05_RS09565 IPR017639 Benzoate 1,2-dioxygenase, large subunit RD05_RS09565 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS09565 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RD05_RS09565 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD05_RS09565 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD05_RS09570 IPR000391 Ring-hydroxylating dioxygenase beta subunit RD05_RS09570 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit RD05_RS09570 IPR032710 NTF2-like domain superfamily RD05_RS09575 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS09575 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS09575 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS09575 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS09580 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS09580 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS09580 IPR036291 NAD(P)-binding domain superfamily RD05_RS09580 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS09585 IPR012675 Beta-grasp domain superfamily RD05_RS09585 IPR018298 Adrenodoxin, iron-sulphur binding site RD05_RS09585 IPR001055 Adrenodoxin RD05_RS09585 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS09585 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS09590 IPR003673 CoA-transferase family III RD05_RS09590 IPR023606 CoA-transferase family III domain superfamily RD05_RS09595 IPR033140 Lipase, GDXG, putative serine active site RD05_RS09595 IPR002168 Lipase, GDXG, putative histidine active site RD05_RS09595 IPR013094 Alpha/beta hydrolase fold-3 RD05_RS09595 IPR029058 Alpha/Beta hydrolase fold RD05_RS09600 IPR011880 Phenylacetate-CoA ligase RD05_RS09600 IPR028154 AMP-dependent ligase, C-terminal RD05_RS09600 IPR000873 AMP-dependent synthetase/ligase RD05_RS09600 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS09605 IPR002155 Thiolase RD05_RS09605 IPR020616 Thiolase, N-terminal RD05_RS09605 IPR020613 Thiolase, conserved site RD05_RS09605 IPR020617 Thiolase, C-terminal RD05_RS09605 IPR016039 Thiolase-like RD05_RS09605 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS09605 IPR020610 Thiolase, active site RD05_RS09615 IPR022028 Protein of unknown function DUF3604 RD05_RS09620 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09620 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09620 IPR000847 Transcription regulator HTH, LysR RD05_RS09620 IPR005119 LysR, substrate-binding RD05_RS09625 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS09625 IPR042100 Bordetella uptake gene, domain 1 RD05_RS09625 IPR005064 Bordetella uptake gene RD05_RS09645 IPR009050 Globin-like superfamily RD05_RS09645 IPR012292 Globin/Protoglobin RD05_RS09645 IPR001486 Truncated hemoglobin RD05_RS09675 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS09675 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS09675 IPR036291 NAD(P)-binding domain superfamily RD05_RS09680 IPR000120 Amidase RD05_RS09680 IPR023631 Amidase signature domain RD05_RS09680 IPR036928 Amidase signature (AS) superfamily RD05_RS09680 IPR020556 Amidase, conserved site RD05_RS09685 IPR000120 Amidase RD05_RS09685 IPR020556 Amidase, conserved site RD05_RS09685 IPR036928 Amidase signature (AS) superfamily RD05_RS09685 IPR023631 Amidase signature domain RD05_RS09695 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS09695 IPR002509 NodB homology domain RD05_RS09695 IPR037950 Peptidoglycan deacetylase PgdA-like RD05_RS09700 IPR042100 Bordetella uptake gene, domain 1 RD05_RS09700 IPR005064 Bordetella uptake gene RD05_RS09725 IPR023753 FAD/NAD(P)-binding domain RD05_RS09725 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RD05_RS09725 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RD05_RS09725 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS09725 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS09725 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD05_RS09750 IPR000847 Transcription regulator HTH, LysR RD05_RS09750 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09750 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09750 IPR005119 LysR, substrate-binding RD05_RS09760 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS09760 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS09760 IPR002888 [2Fe-2S]-binding RD05_RS09760 IPR036884 [2Fe-2S]-binding domain superfamily RD05_RS09760 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS09765 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RD05_RS09765 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS09765 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RD05_RS09765 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD05_RS09765 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD05_RS09765 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RD05_RS09775 IPR009594 Transcription regulator HTH, AraC, N-terminal RD05_RS09775 IPR018060 DNA binding HTH domain, AraC-type RD05_RS09775 IPR009057 Homeobox-like domain superfamily RD05_RS09795 IPR011701 Major facilitator superfamily RD05_RS09795 IPR036259 MFS transporter superfamily RD05_RS09795 IPR020846 Major facilitator superfamily domain RD05_RS09795 IPR005829 Sugar transporter, conserved site RD05_RS09810 IPR000182 GNAT domain RD05_RS09810 IPR016181 Acyl-CoA N-acyltransferase RD05_RS09820 IPR039421 Type I protein exporter RD05_RS09820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09820 IPR017871 ABC transporter, conserved site RD05_RS09820 IPR003439 ABC transporter-like RD05_RS09820 IPR036640 ABC transporter type 1, transmembrane domain superfamily RD05_RS09820 IPR003593 AAA+ ATPase domain RD05_RS09820 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS09830 IPR003689 Zinc/iron permease RD05_RS09845 IPR011547 SLC26A/SulP transporter domain RD05_RS09845 IPR001902 SLC26A/SulP transporter RD05_RS09845 IPR002645 STAS domain RD05_RS09845 IPR036513 STAS domain superfamily RD05_RS09865 IPR035923 TT1751-like domain superfamily RD05_RS09865 IPR003691 Putative fluoride ion transporter CrcB RD05_RS09865 IPR005180 Domain of unknown function DUF302 RD05_RS09875 IPR035451 Ada-like domain superfamily RD05_RS09875 IPR009057 Homeobox-like domain superfamily RD05_RS09875 IPR018060 DNA binding HTH domain, AraC-type RD05_RS09875 IPR018062 HTH domain AraC-type, conserved site RD05_RS09875 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA RD05_RS09875 IPR004026 Ada DNA repair, metal-binding RD05_RS09880 IPR011008 Dimeric alpha-beta barrel RD05_RS09880 IPR009874 Protein of unknown function DUF1428 RD05_RS09885 IPR003719 Phenazine biosynthesis PhzF protein RD05_RS09890 IPR005119 LysR, substrate-binding RD05_RS09890 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS09890 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS09890 IPR000847 Transcription regulator HTH, LysR RD05_RS09895 IPR007383 Protein of unknown function DUF445 RD05_RS09910 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS09910 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS09910 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS09910 IPR015590 Aldehyde dehydrogenase domain RD05_RS09910 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS09910 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS09915 IPR025944 Sigma-54 interaction domain, conserved site RD05_RS09915 IPR009057 Homeobox-like domain superfamily RD05_RS09915 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD05_RS09915 IPR002197 DNA binding HTH domain, Fis-type RD05_RS09915 IPR003018 GAF domain RD05_RS09915 IPR029016 GAF-like domain superfamily RD05_RS09915 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS09915 IPR003593 AAA+ ATPase domain RD05_RS09915 IPR002078 RNA polymerase sigma factor 54 interaction domain RD05_RS09915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09930 IPR007300 CidB/LrgB family RD05_RS09935 IPR005538 LrgA/CidA family RD05_RS09935 IPR022957 Uncharacterised protein family UPF0299 RD05_RS09940 IPR004472 Dethiobiotin synthase BioD RD05_RS09940 IPR041698 Methyltransferase domain 25 RD05_RS09940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS09950 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS09950 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type RD05_RS09950 IPR004839 Aminotransferase, class I/classII RD05_RS09950 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS09950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS09950 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RD05_RS09955 IPR005814 Aminotransferase class-III RD05_RS09955 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RD05_RS09955 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS09955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS09955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS09990 IPR004678 Cytochrome c oxidase cbb3-type, subunit III RD05_RS09990 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal RD05_RS09990 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily RD05_RS09990 IPR009056 Cytochrome c-like domain RD05_RS09990 IPR008168 Cytochrome c, class IC RD05_RS09990 IPR036909 Cytochrome c-like domain superfamily RD05_RS09995 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS09995 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS09995 IPR013783 Immunoglobulin-like fold RD05_RS09995 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG RD05_RS09995 IPR032879 FixG, C-terminal immunoglobulin-like domain RD05_RS10020 IPR017871 ABC transporter, conserved site RD05_RS10020 IPR003439 ABC transporter-like RD05_RS10020 IPR003593 AAA+ ATPase domain RD05_RS10020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10025 IPR000412 ABC-2 transporter RD05_RS10025 IPR013525 ABC-2 type transporter RD05_RS10030 IPR002549 Transmembrane protein TqsA-like RD05_RS10060 IPR009042 RNA polymerase sigma-70 region 1.2 RD05_RS10060 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS10060 IPR042189 Sigma-70 factor, region 1.1 superfamily RD05_RS10060 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RD05_RS10060 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10060 IPR007624 RNA polymerase sigma-70 region 3 RD05_RS10060 IPR007631 RNA polymerase sigma factor 70, non-essential domain RD05_RS10060 IPR014284 RNA polymerase sigma-70 like domain RD05_RS10060 IPR007127 RNA polymerase sigma factor 70, region 1.1 RD05_RS10060 IPR000943 RNA polymerase sigma-70 RD05_RS10060 IPR007630 RNA polymerase sigma-70 region 4 RD05_RS10060 IPR028630 RNA polymerase sigma factor RpoD RD05_RS10060 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS10060 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS10065 IPR019475 DNA primase, DnaB-helicase binding domain RD05_RS10065 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RD05_RS10065 IPR013264 DNA primase, catalytic core, N-terminal RD05_RS10065 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily RD05_RS10065 IPR002694 Zinc finger, CHC2-type RD05_RS10065 IPR006171 TOPRIM domain RD05_RS10065 IPR006295 DNA primase, DnaG RD05_RS10065 IPR034151 Bacterial DnaG primase, TOPRIM domain RD05_RS10065 IPR030846 DNA primase DnaG, bacteria RD05_RS10065 IPR036977 DNA Primase, CHC2-type zinc finger RD05_RS10065 IPR013173 DNA primase DnaG, DnaB-binding domain RD05_RS10070 IPR038380 Ribosomal protein S21 superfamily RD05_RS10070 IPR018278 Ribosomal protein S21, conserved site RD05_RS10070 IPR001911 Ribosomal protein S21 RD05_RS10075 IPR029057 Phosphoribosyltransferase-like RD05_RS10075 IPR000836 Phosphoribosyltransferase domain RD05_RS10075 IPR005904 Hypoxanthine phosphoribosyl transferase RD05_RS10080 IPR001114 Adenylosuccinate synthetase RD05_RS10080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10080 IPR033128 Adenylosuccinate synthase, active site RD05_RS10080 IPR042109 Adenylosuccinate synthetase, domain 1 RD05_RS10080 IPR018220 Adenylosuccinate synthase, GTP-binding site RD05_RS10080 IPR042110 Adenylosuccinate synthetase, domain 2 RD05_RS10080 IPR042111 Adenylosuccinate synthetase, domain 3 RD05_RS10085 IPR004517 ATP phosphoribosyltransferase regulatory subunit RD05_RS10085 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RD05_RS10085 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain RD05_RS10090 IPR010200 HflC RD05_RS10090 IPR036013 Band 7/SPFH domain superfamily RD05_RS10090 IPR001107 Band 7 domain RD05_RS10095 IPR010201 HflK RD05_RS10095 IPR020980 Menbrane protein HflK, N-terminal RD05_RS10095 IPR001107 Band 7 domain RD05_RS10095 IPR001972 Stomatin family RD05_RS10095 IPR036013 Band 7/SPFH domain superfamily RD05_RS10100 IPR035647 EF-G domain III/V-like RD05_RS10100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10100 IPR042108 GTPase HflX, N-terminal domain superfamily RD05_RS10100 IPR030394 HflX-type guanine nucleotide-binding (G) domain RD05_RS10100 IPR016496 GTPase HflX RD05_RS10100 IPR006073 GTP binding domain RD05_RS10100 IPR025121 GTPase HflX, N-terminal RD05_RS10100 IPR032305 GTP-binding protein, middle domain RD05_RS10105 IPR010920 LSM domain superfamily RD05_RS10105 IPR005001 RNA-binding protein Hfq RD05_RS10110 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RD05_RS10110 IPR005861 Histidinol-phosphate aminotransferase family RD05_RS10110 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS10110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS10110 IPR004839 Aminotransferase, class I/classII RD05_RS10115 IPR005225 Small GTP-binding protein domain RD05_RS10115 IPR032859 GTPase Der, C-terminal KH-domain-like RD05_RS10115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10115 IPR015946 K homology domain-like, alpha/beta RD05_RS10115 IPR006073 GTP binding domain RD05_RS10115 IPR016484 GTP-binding protein EngA RD05_RS10115 IPR003593 AAA+ ATPase domain RD05_RS10115 IPR031166 EngA-type guanine nucleotide-binding (G) domain RD05_RS10120 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RD05_RS10120 IPR002372 Pyrrolo-quinoline quinone repeat RD05_RS10120 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RD05_RS10120 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RD05_RS10120 IPR017687 Outer membrane protein assembly factor BamB RD05_RS10125 IPR026039 Uncharacterised protein family UPF0070 RD05_RS10125 IPR011990 Tetratricopeptide-like helical domain superfamily RD05_RS10125 IPR018704 Tetratricopeptide repeat-like domain RD05_RS10130 IPR006195 Aminoacyl-tRNA synthetase, class II RD05_RS10130 IPR004154 Anticodon-binding RD05_RS10130 IPR036621 Anticodon-binding domain superfamily RD05_RS10130 IPR015807 Histidine-tRNA ligase RD05_RS10130 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain RD05_RS10130 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RD05_RS10130 IPR033656 Histidyl-anticodon-binding RD05_RS10135 IPR011005 Dihydropteroate synthase-like RD05_RS10135 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial RD05_RS10135 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type RD05_RS10145 IPR027492 Dual-specificity RNA methyltransferase RlmN RD05_RS10145 IPR013785 Aldolase-type TIM barrel RD05_RS10145 IPR007197 Radical SAM RD05_RS10145 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RD05_RS10145 IPR040072 Methyltransferase (Class A) RD05_RS10150 IPR001564 Nucleoside diphosphate kinase RD05_RS10150 IPR036850 Nucleoside diphosphate kinase-like domain superfamily RD05_RS10150 IPR034907 Nucleoside diphosphate kinase-like domain RD05_RS10150 IPR023005 Nucleoside diphosphate kinase, active site RD05_RS10155 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD05_RS10155 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RD05_RS10155 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RD05_RS10155 IPR033705 Valyl tRNA synthetase, anticodon-binding domain RD05_RS10155 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RD05_RS10155 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS10155 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD05_RS10155 IPR002303 Valine-tRNA ligase RD05_RS10155 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD05_RS10155 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RD05_RS10155 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS10165 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS10165 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10165 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS10165 IPR001789 Signal transduction response regulator, receiver domain RD05_RS10165 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS10165 IPR011006 CheY-like superfamily RD05_RS10170 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS10170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS10170 IPR005467 Histidine kinase domain RD05_RS10170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS10170 IPR003660 HAMP domain RD05_RS10170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS10170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS10170 IPR013727 Two-component sensor kinase, N-terminal RD05_RS10190 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS10190 IPR000192 Aminotransferase class V domain RD05_RS10190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS10190 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RD05_RS10190 IPR010970 Cysteine desulfurase, SufS RD05_RS10195 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RD05_RS10195 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RD05_RS10195 IPR029028 Alpha/beta knot methyltransferases RD05_RS10195 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RD05_RS10195 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS10200 IPR011961 16S rRNA processing protein RimM RD05_RS10200 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS10200 IPR036976 RimM, N-terminal domain superfamily RD05_RS10200 IPR002676 RimM, N-terminal RD05_RS10200 IPR011033 PRC-barrel-like superfamily RD05_RS10205 IPR023803 Ribosomal protein S16 domain superfamily RD05_RS10205 IPR000307 Ribosomal protein S16 RD05_RS10215 IPR036868 TusA-like domain superfamily RD05_RS10215 IPR001455 TusA-like domain RD05_RS10220 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RD05_RS10220 IPR002318 Alanine-tRNA ligase, class IIc RD05_RS10220 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily RD05_RS10220 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain RD05_RS10220 IPR003156 DHHA1 domain RD05_RS10220 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RD05_RS10220 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RD05_RS10220 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS10220 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RD05_RS10265 IPR020556 Amidase, conserved site RD05_RS10265 IPR000120 Amidase RD05_RS10265 IPR036928 Amidase signature (AS) superfamily RD05_RS10265 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS10265 IPR023631 Amidase signature domain RD05_RS10270 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS10270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10270 IPR017871 ABC transporter, conserved site RD05_RS10270 IPR003439 ABC transporter-like RD05_RS10270 IPR003593 AAA+ ATPase domain RD05_RS10275 IPR035906 MetI-like superfamily RD05_RS10275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS10280 IPR035906 MetI-like superfamily RD05_RS10280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS10285 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS10285 IPR000914 Solute-binding protein family 5 domain RD05_RS10285 IPR023765 Solute-binding protein family 5, conserved site RD05_RS10285 IPR039424 Solute-binding protein family 5 RD05_RS10285 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS10300 IPR005119 LysR, substrate-binding RD05_RS10300 IPR000847 Transcription regulator HTH, LysR RD05_RS10300 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS10300 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10305 IPR006059 Bacterial extracellular solute-binding protein RD05_RS10305 IPR006061 Solute-binding family 1, conserved site RD05_RS10310 IPR023080 D-amino acid dehydrogenase DadA RD05_RS10310 IPR006076 FAD dependent oxidoreductase RD05_RS10310 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS10315 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS10315 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS10315 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS10315 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS10315 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS10315 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS10315 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS10315 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS10315 IPR012675 Beta-grasp domain superfamily RD05_RS10320 IPR009010 Aspartate decarboxylase-like domain superfamily RD05_RS10320 IPR003190 Aspartate decarboxylase RD05_RS10335 IPR005255 PdxA family RD05_RS10340 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily RD05_RS10340 IPR042213 Nucleotide-binding, C-terminal domain superfamily RD05_RS10340 IPR031475 Nucleotide-binding C-terminal domain RD05_RS10340 IPR010737 Four-carbon acid sugar kinase, N-terminal domain RD05_RS10345 IPR004684 2-keto-3-deoxygluconate permease RD05_RS10360 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS10360 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS10360 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS10360 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS10370 IPR004363 Methylglyoxal synthase RD05_RS10370 IPR011607 Methylglyoxal synthase-like domain RD05_RS10370 IPR036914 Methylglyoxal synthase-like domain superfamily RD05_RS10375 IPR036762 IscX-like superfamily RD05_RS10375 IPR007479 ISC system FeS cluster assembly, IscX RD05_RS10380 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria RD05_RS10380 IPR012675 Beta-grasp domain superfamily RD05_RS10380 IPR018298 Adrenodoxin, iron-sulphur binding site RD05_RS10380 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS10380 IPR001055 Adrenodoxin RD05_RS10380 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS10385 IPR018181 Heat shock protein 70, conserved site RD05_RS10385 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RD05_RS10385 IPR013126 Heat shock protein 70 family RD05_RS10385 IPR010236 ISC system FeS cluster assembly, HscA chaperone RD05_RS10385 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RD05_RS10390 IPR036386 HscB, C-terminal domain superfamily RD05_RS10390 IPR004640 Co-chaperone Hsc20 RD05_RS10390 IPR001623 DnaJ domain RD05_RS10390 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RD05_RS10390 IPR036869 Chaperone J-domain superfamily RD05_RS10395 IPR011302 Iron-binding protein IscA, proteobacteria RD05_RS10395 IPR000361 FeS cluster biogenesis RD05_RS10395 IPR016092 FeS cluster insertion protein RD05_RS10395 IPR017870 FeS cluster insertion, C-terminal, conserved site RD05_RS10395 IPR035903 HesB-like domain superfamily RD05_RS10400 IPR011339 ISC system FeS cluster assembly, IscU scaffold RD05_RS10400 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RD05_RS10405 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10405 IPR010240 Cysteine desulfurase IscS RD05_RS10405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS10405 IPR000192 Aminotransferase class V domain RD05_RS10405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS10405 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RD05_RS10405 IPR016454 Cysteine desulfurase RD05_RS10410 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10410 IPR000944 Transcription regulator Rrf2-type RD05_RS10410 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS10410 IPR010242 Transcription factor HTH, IscR RD05_RS10410 IPR030489 Transcription regulator Rrf2-type, conserved site RD05_RS10415 IPR036196 Phosphotyrosine protein phosphatase I superfamily RD05_RS10415 IPR023485 Phosphotyrosine protein phosphatase I RD05_RS10415 IPR017867 Protein-tyrosine phosphatase, low molecular weight RD05_RS10420 IPR041471 UvrB, interaction domain RD05_RS10420 IPR001650 Helicase, C-terminal RD05_RS10420 IPR006935 Helicase/UvrB, N-terminal RD05_RS10420 IPR004807 UvrABC system, subunit B RD05_RS10420 IPR036876 UVR domain superfamily RD05_RS10420 IPR001943 UVR domain RD05_RS10420 IPR024759 UvrB, YAD/RRR-motif-containing domain RD05_RS10420 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS10420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10425 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10425 IPR000796 Aspartate/other aminotransferase RD05_RS10425 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD05_RS10425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS10425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS10425 IPR004839 Aminotransferase, class I/classII RD05_RS10430 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS10430 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10430 IPR015927 Peptidase S24/S26A/S26B/S26C RD05_RS10430 IPR006199 LexA repressor, DNA-binding domain RD05_RS10430 IPR006197 Peptidase S24, LexA-like RD05_RS10430 IPR006200 Transcription regulator LexA RD05_RS10430 IPR039418 LexA-like RD05_RS10430 IPR036286 LexA/Signal peptidase-like superfamily RD05_RS10435 IPR003992 Pertactin autotransporter RD05_RS10435 IPR011050 Pectin lyase fold/virulence factor RD05_RS10435 IPR005546 Autotransporter beta-domain RD05_RS10435 IPR006315 Outer membrane autotransporter barrel RD05_RS10435 IPR036709 Autotransporter beta-domain superfamily RD05_RS10435 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS10435 IPR004899 Pertactin, central region RD05_RS10435 IPR003991 Pertactin virulence factor family RD05_RS10455 IPR042100 Bordetella uptake gene, domain 1 RD05_RS10455 IPR005064 Bordetella uptake gene RD05_RS10460 IPR004164 Coenzyme A transferase active site RD05_RS10460 IPR012791 3-oxoacid CoA-transferase, subunit B RD05_RS10460 IPR004165 Coenzyme A transferase family I RD05_RS10460 IPR037171 NagB/RpiA transferase-like RD05_RS10465 IPR012792 3-oxoacid CoA-transferase, subunit A RD05_RS10465 IPR004163 Coenzyme A transferase binding site RD05_RS10465 IPR037171 NagB/RpiA transferase-like RD05_RS10465 IPR004165 Coenzyme A transferase family I RD05_RS10475 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS10475 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS10475 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS10475 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS10475 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS10475 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS10480 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS10480 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS10480 IPR036291 NAD(P)-binding domain superfamily RD05_RS10480 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS10485 IPR016039 Thiolase-like RD05_RS10485 IPR002155 Thiolase RD05_RS10485 IPR012805 Acetyl-CoA C-acyltransferase FadA RD05_RS10485 IPR020610 Thiolase, active site RD05_RS10485 IPR020617 Thiolase, C-terminal RD05_RS10485 IPR020613 Thiolase, conserved site RD05_RS10485 IPR020616 Thiolase, N-terminal RD05_RS10485 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS10495 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS10495 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RD05_RS10495 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS10495 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS10500 IPR029069 HotDog domain superfamily RD05_RS10500 IPR002539 MaoC-like dehydratase domain RD05_RS10500 IPR039375 Nodulation protein N-like RD05_RS10505 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS10505 IPR042100 Bordetella uptake gene, domain 1 RD05_RS10505 IPR005064 Bordetella uptake gene RD05_RS10510 IPR023606 CoA-transferase family III domain superfamily RD05_RS10510 IPR003673 CoA-transferase family III RD05_RS10515 IPR000847 Transcription regulator HTH, LysR RD05_RS10515 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain RD05_RS10515 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10515 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS10515 IPR005119 LysR, substrate-binding RD05_RS10520 IPR015947 PUA-like superfamily RD05_RS10520 IPR008268 Peptidase S16, active site RD05_RS10520 IPR004815 Lon protease, bacterial/eukaryotic-type RD05_RS10520 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS10520 IPR027065 Lon protease RD05_RS10520 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS10520 IPR003959 ATPase, AAA-type, core RD05_RS10520 IPR003593 AAA+ ATPase domain RD05_RS10520 IPR003111 Lon, substrate-binding domain RD05_RS10520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10520 IPR027543 Lon protease, bacterial RD05_RS10520 IPR008269 Peptidase S16, Lon proteolytic domain RD05_RS10525 IPR038366 Zinc finger, ClpX C4-type superfamily RD05_RS10525 IPR004487 Clp protease, ATP-binding subunit ClpX RD05_RS10525 IPR019489 Clp ATPase, C-terminal RD05_RS10525 IPR003959 ATPase, AAA-type, core RD05_RS10525 IPR003593 AAA+ ATPase domain RD05_RS10525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10525 IPR010603 Zinc finger, ClpX C4-type RD05_RS10530 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS10530 IPR001907 ATP-dependent Clp protease proteolytic subunit RD05_RS10530 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RD05_RS10530 IPR033135 ClpP, histidine active site RD05_RS10535 IPR008880 Trigger factor, C-terminal RD05_RS10535 IPR027304 Trigger factor/SurA domain superfamily RD05_RS10535 IPR036611 Trigger factor ribosome-binding domain superfamily RD05_RS10535 IPR008881 Trigger factor, ribosome-binding, bacterial RD05_RS10535 IPR037041 Trigger factor, C-terminal domain superfamily RD05_RS10535 IPR005215 Trigger factor RD05_RS10535 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RD05_RS10540 IPR020761 Uncharacterised protein family UPF0114, bacteria RD05_RS10540 IPR005134 Uncharacterised protein family UPF0114 RD05_RS10545 IPR012340 Nucleic acid-binding, OB-fold RD05_RS10545 IPR012156 Cold shock, CspA RD05_RS10545 IPR019844 Cold-shock (CSD) domain RD05_RS10545 IPR002059 Cold-shock protein, DNA-binding RD05_RS10545 IPR011129 Cold shock domain RD05_RS10555 IPR012340 Nucleic acid-binding, OB-fold RD05_RS10555 IPR011129 Cold shock domain RD05_RS10555 IPR012156 Cold shock, CspA RD05_RS10555 IPR002059 Cold-shock protein, DNA-binding RD05_RS10555 IPR019844 Cold-shock (CSD) domain RD05_RS10590 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RD05_RS10590 IPR001451 Hexapeptide repeat RD05_RS10590 IPR018357 Hexapeptide transferase, conserved site RD05_RS10590 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RD05_RS10590 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily RD05_RS10590 IPR011004 Trimeric LpxA-like superfamily RD05_RS10595 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS10595 IPR011650 Peptidase M20, dimerisation domain RD05_RS10595 IPR002933 Peptidase M20 RD05_RS10595 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RD05_RS10600 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase RD05_RS10600 IPR004556 Methyltransferase HemK-like RD05_RS10600 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS10600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS10600 IPR007848 Methyltransferase small domain RD05_RS10605 IPR003593 AAA+ ATPase domain RD05_RS10605 IPR032781 ABC-transporter extension domain RD05_RS10605 IPR003439 ABC transporter-like RD05_RS10605 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10605 IPR017871 ABC transporter, conserved site RD05_RS10610 IPR012910 TonB-dependent receptor, plug domain RD05_RS10610 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS10610 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS10615 IPR000212 DNA helicase, UvrD/REP type RD05_RS10615 IPR014016 UvrD-like helicase, ATP-binding domain RD05_RS10615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10615 IPR013986 DExx box DNA helicase domain superfamily RD05_RS10615 IPR005753 DNA helicase, ATP-dependent, UvrD type RD05_RS10615 IPR014017 UvrD-like DNA helicase, C-terminal RD05_RS10615 IPR034739 UvrD/AddA helicase, N-terminal RD05_RS10635 IPR023267 RNA (C5-cytosine) methyltransferase RD05_RS10635 IPR006027 NusB/RsmB/TIM44 RD05_RS10635 IPR004573 rRNA small subunit methyltransferase B RD05_RS10635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS10635 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RD05_RS10635 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type RD05_RS10635 IPR035926 NusB-like superfamily RD05_RS10640 IPR023465 Riboflavin kinase domain superfamily RD05_RS10640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS10640 IPR023468 Riboflavin kinase RD05_RS10640 IPR002606 Riboflavin kinase, bacterial RD05_RS10640 IPR015864 FAD synthetase RD05_RS10640 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RD05_RS10645 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS10645 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD05_RS10645 IPR023585 Isoleucine-tRNA ligase, type 1 RD05_RS10645 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD05_RS10645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS10645 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain RD05_RS10645 IPR002301 Isoleucine-tRNA ligase RD05_RS10645 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RD05_RS10645 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD05_RS10645 IPR010663 Zinc finger, FPG/IleRS-type RD05_RS10650 IPR001872 Peptidase A8, signal peptidase II RD05_RS10655 IPR035929 CoaB-like superfamily RD05_RS10655 IPR036551 Flavin prenyltransferase-like RD05_RS10655 IPR003382 Flavoprotein RD05_RS10655 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RD05_RS10655 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RD05_RS10665 IPR011008 Dimeric alpha-beta barrel RD05_RS10665 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS10665 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS10665 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS10665 IPR011991 ArsR-like helix-turn-helix domain RD05_RS10665 IPR000485 AsnC-type HTH domain RD05_RS10665 IPR019888 Transcription regulator AsnC-type RD05_RS10665 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10680 IPR023346 Lysozyme-like domain superfamily RD05_RS10680 IPR031304 Transglycosylase SLT domain 2 RD05_RS10680 IPR011757 Lytic transglycosylase MltB RD05_RS10685 IPR009078 Ferritin-like superfamily RD05_RS10685 IPR007402 Protein of unknown function DUF455 RD05_RS10685 IPR011197 Uncharacterised conserved protein UCP012318 RD05_RS10705 IPR004101 Mur ligase, C-terminal RD05_RS10705 IPR011761 ATP-grasp fold RD05_RS10705 IPR036615 Mur ligase, C-terminal domain superfamily RD05_RS10705 IPR013221 Mur ligase, central RD05_RS10705 IPR036565 Mur-like, catalytic domain superfamily RD05_RS10705 IPR013651 ATP-grasp fold, RimK-type RD05_RS10705 IPR011810 Cyanophycin synthetase RD05_RS10710 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS10710 IPR011810 Cyanophycin synthetase RD05_RS10710 IPR036565 Mur-like, catalytic domain superfamily RD05_RS10710 IPR036615 Mur ligase, C-terminal domain superfamily RD05_RS10710 IPR011761 ATP-grasp fold RD05_RS10710 IPR004101 Mur ligase, C-terminal RD05_RS10710 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS10710 IPR013221 Mur ligase, central RD05_RS10715 IPR036629 YjbJ superfamily RD05_RS10715 IPR026042 Stress response protein YjbJ RD05_RS10715 IPR008462 CsbD-like domain RD05_RS10725 IPR014004 Transport-associated and nodulation domain, bacteria RD05_RS10725 IPR007055 BON domain RD05_RS10740 IPR003439 ABC transporter-like RD05_RS10740 IPR017871 ABC transporter, conserved site RD05_RS10740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10740 IPR003593 AAA+ ATPase domain RD05_RS10745 IPR013830 SGNH hydrolase-type esterase domain RD05_RS10745 IPR036514 SGNH hydrolase superfamily RD05_RS10750 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RD05_RS10750 IPR027304 Trigger factor/SurA domain superfamily RD05_RS10750 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD05_RS10755 IPR030395 Glycerophosphodiester phosphodiesterase domain RD05_RS10755 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily RD05_RS10760 IPR007473 Ribosomal RNA large subunit methyltransferase J RD05_RS10760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS10765 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS10765 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RD05_RS10765 IPR021179 Mercury(II) reductase RD05_RS10765 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RD05_RS10765 IPR023753 FAD/NAD(P)-binding domain RD05_RS10765 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS10765 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD05_RS10770 IPR011906 Glutaredoxin domain RD05_RS10770 IPR036249 Thioredoxin-like superfamily RD05_RS10770 IPR002109 Glutaredoxin RD05_RS10770 IPR014025 Glutaredoxin subgroup RD05_RS10770 IPR011767 Glutaredoxin active site RD05_RS10770 IPR037944 Peroxiredoxin-5-like RD05_RS10770 IPR013740 Redoxin RD05_RS10780 IPR011789 Cu(I)-responsive transcriptional regulator RD05_RS10780 IPR000551 MerR-type HTH domain RD05_RS10780 IPR015358 Transcription regulator MerR, DNA binding RD05_RS10780 IPR009061 Putative DNA-binding domain superfamily RD05_RS10785 IPR030390 RNA methyltransferase TrmA, active site RD05_RS10785 IPR010280 (Uracil-5)-methyltransferase family RD05_RS10785 IPR002792 TRAM domain RD05_RS10785 IPR030391 RNA methyltransferase TrmA, conserved site RD05_RS10785 IPR012340 Nucleic acid-binding, OB-fold RD05_RS10785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS10785 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD RD05_RS10805 IPR016047 Peptidase M23 RD05_RS10805 IPR018392 LysM domain RD05_RS10805 IPR036779 LysM domain superfamily RD05_RS10805 IPR011055 Duplicated hybrid motif RD05_RS10810 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RD05_RS10810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS10815 IPR030048 Survival protein SurE RD05_RS10815 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RD05_RS10815 IPR036523 SurE-like phosphatase/nucleotidase superfamily RD05_RS10820 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY RD05_RS10830 IPR017861 Kae1/TsaD family RD05_RS10830 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RD05_RS10830 IPR000905 Gcp-like domain RD05_RS10835 IPR006043 Xanthine/uracil/vitamin C permease RD05_RS10835 IPR026033 Azaguanine-like transporters RD05_RS10845 IPR005746 Thioredoxin RD05_RS10845 IPR036249 Thioredoxin-like superfamily RD05_RS10845 IPR013766 Thioredoxin domain RD05_RS10845 IPR017937 Thioredoxin, conserved site RD05_RS10850 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS10850 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RD05_RS10850 IPR036956 Impact, N-terminal domain superfamily RD05_RS10850 IPR001498 Impact, N-terminal RD05_RS10850 IPR035647 EF-G domain III/V-like RD05_RS10850 IPR023582 Impact family RD05_RS10860 IPR000182 GNAT domain RD05_RS10860 IPR012772 L-2,4-diaminobutyric acid acetyltransferase RD05_RS10860 IPR016181 Acyl-CoA N-acyltransferase RD05_RS10865 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10865 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS10865 IPR023187 Transcriptional regulator MarR-type, conserved site RD05_RS10865 IPR000835 MarR-type HTH domain RD05_RS10875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS10875 IPR005814 Aminotransferase class-III RD05_RS10875 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS10880 IPR011852 TRAP transporter solute receptor, TAXI family RD05_RS10900 IPR005546 Autotransporter beta-domain RD05_RS10900 IPR036709 Autotransporter beta-domain superfamily RD05_RS10900 IPR006315 Outer membrane autotransporter barrel RD05_RS10900 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS10900 IPR011050 Pectin lyase fold/virulence factor RD05_RS10910 IPR027379 Cardiolipin synthase N-terminal RD05_RS10910 IPR022924 Cardiolipin synthase RD05_RS10910 IPR030874 Cardiolipin synthase, Firmicutes-type RD05_RS10910 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS10910 IPR025202 Phospholipase D-like domain RD05_RS10910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS10915 IPR002645 STAS domain RD05_RS10915 IPR036513 STAS domain superfamily RD05_RS10915 IPR003658 Anti-sigma factor antagonist RD05_RS10920 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS10920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS10925 IPR000821 Alanine racemase RD05_RS10925 IPR029066 PLP-binding barrel RD05_RS10925 IPR011079 Alanine racemase, C-terminal RD05_RS10925 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD05_RS10925 IPR001608 Alanine racemase, N-terminal RD05_RS10925 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RD05_RS10935 IPR036457 PPM-type phosphatase domain superfamily RD05_RS10935 IPR001932 PPM-type phosphatase domain RD05_RS10935 IPR003660 HAMP domain RD05_RS10960 IPR039425 RNA polymerase sigma-70 like RD05_RS10960 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS10960 IPR014284 RNA polymerase sigma-70 like domain RD05_RS10960 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD05_RS10960 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS10960 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS10960 IPR014286 RNA polymerase sigma-70 RpoE type RD05_RS10960 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS10960 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS10965 IPR038591 NolW-like superfamily RD05_RS10965 IPR003522 Type III secretion system outer membrane pore YscC/HrcC RD05_RS10965 IPR004846 Type II/III secretion system RD05_RS10965 IPR005644 NolW-like RD05_RS10965 IPR004845 Type II secretion system GspD, conserved site RD05_RS10975 IPR006135 Type III secretion system substrate exporter RD05_RS10975 IPR029025 Type III secretion system substrate exporter, C-terminal RD05_RS10975 IPR006307 Type III exporter system, secretion apparatus protein BsaZ RD05_RS10980 IPR006304 Type III secretion protein SpaR/YscT RD05_RS10980 IPR002010 Type III secretion system inner membrane R protein RD05_RS10985 IPR006306 Type III secretion protein HrpO RD05_RS10985 IPR002191 Bacterial export protein family 3 RD05_RS10990 IPR005838 Type III secretion system inner membrane P protein RD05_RS10990 IPR005773 Yop virulence translocation protein R RD05_RS10995 IPR001543 Surface presentation of antigen (SpoA) RD05_RS10995 IPR036429 SpoA-like superfamily RD05_RS10995 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO RD05_RS10995 IPR003283 Type III secretion system outer membrane, SpaO RD05_RS11010 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD05_RS11010 IPR040627 T3SS EscN ATPase, C-terminal RD05_RS11010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11010 IPR013380 ATPase, type III secretion system, H+-transporting RD05_RS11010 IPR005714 ATPase, type III secretion system, FliI/YscN RD05_RS11010 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS11010 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RD05_RS11010 IPR003593 AAA+ ATPase domain RD05_RS11015 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RD05_RS11015 IPR012842 Type III secretion system HrpE/YscL RD05_RS11025 IPR006182 Secretory protein YscJ/FliF RD05_RS11025 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ RD05_RS11090 IPR006302 Type III secretion protein HrcV RD05_RS11090 IPR042194 FHIPEP, domain 1 RD05_RS11090 IPR001712 Type III secretion system FHIPEP RD05_RS11090 IPR025505 FHIPEP conserved site RD05_RS11090 IPR042196 FHIPEP, domain 4 RD05_RS11090 IPR042193 FHIPEP, domain 3 RD05_RS11120 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RD05_RS11120 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily RD05_RS11120 IPR028624 Transcription elongation factor GreA/GreB RD05_RS11120 IPR006359 Transcription elongation factor GreA RD05_RS11120 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RD05_RS11120 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RD05_RS11120 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily RD05_RS11120 IPR023459 Transcription elongation factor GreA/GreB family RD05_RS11125 IPR003660 HAMP domain RD05_RS11125 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site RD05_RS11125 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily RD05_RS11125 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS11125 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS11125 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding RD05_RS11130 IPR019918 Pyrimidine permease RutG, predicted RD05_RS11130 IPR006042 Xanthine/uracil permease RD05_RS11130 IPR006043 Xanthine/uracil/vitamin C permease RD05_RS11155 IPR022890 Ferredoxin--NADP reductase, type 2 RD05_RS11155 IPR023753 FAD/NAD(P)-binding domain RD05_RS11155 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS11160 IPR026045 Ferric binding protein RD05_RS11165 IPR006323 Phosphonoacetaldehyde hydrolase RD05_RS11165 IPR006439 HAD hydrolase, subfamily IA RD05_RS11165 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RD05_RS11165 IPR023214 HAD superfamily RD05_RS11165 IPR036412 HAD-like superfamily RD05_RS11165 IPR041492 Haloacid dehalogenase-like hydrolase RD05_RS11170 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS11170 IPR035906 MetI-like superfamily RD05_RS11175 IPR003439 ABC transporter-like RD05_RS11175 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS11175 IPR017871 ABC transporter, conserved site RD05_RS11175 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal RD05_RS11175 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 RD05_RS11175 IPR003593 AAA+ ATPase domain RD05_RS11175 IPR013611 Transport-associated OB, type 2 RD05_RS11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11180 IPR000847 Transcription regulator HTH, LysR RD05_RS11180 IPR005119 LysR, substrate-binding RD05_RS11180 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS11180 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS11190 IPR001763 Rhodanese-like domain RD05_RS11190 IPR036873 Rhodanese-like domain superfamily RD05_RS11200 IPR022919 Peptidase M48, protease HtpX, putative RD05_RS11200 IPR001915 Peptidase M48 RD05_RS11205 IPR013154 Alcohol dehydrogenase, N-terminal RD05_RS11205 IPR036291 NAD(P)-binding domain superfamily RD05_RS11205 IPR020843 Polyketide synthase, enoylreductase domain RD05_RS11205 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD05_RS11205 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS11205 IPR011032 GroES-like superfamily RD05_RS11210 IPR000620 EamA domain RD05_RS11220 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS11220 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS11220 IPR000835 MarR-type HTH domain RD05_RS11230 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RD05_RS11230 IPR005694 Efflux pump membrane protein RD05_RS11235 IPR036259 MFS transporter superfamily RD05_RS11235 IPR020846 Major facilitator superfamily domain RD05_RS11235 IPR011701 Major facilitator superfamily RD05_RS11235 IPR004638 Drug resistance transporter EmrB-like RD05_RS11240 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD05_RS11240 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS11240 IPR011829 Tartrate dehydrogenase RD05_RS11245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS11245 IPR000524 Transcription regulator HTH, GntR RD05_RS11245 IPR004839 Aminotransferase, class I/classII RD05_RS11245 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS11245 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS11245 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS11250 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS11250 IPR039424 Solute-binding protein family 5 RD05_RS11250 IPR023765 Solute-binding protein family 5, conserved site RD05_RS11250 IPR000914 Solute-binding protein family 5 domain RD05_RS11255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS11255 IPR035906 MetI-like superfamily RD05_RS11260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS11260 IPR035906 MetI-like superfamily RD05_RS11260 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS11265 IPR017871 ABC transporter, conserved site RD05_RS11265 IPR003439 ABC transporter-like RD05_RS11265 IPR003593 AAA+ ATPase domain RD05_RS11265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11265 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS11275 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS11275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS11275 IPR005814 Aminotransferase class-III RD05_RS11275 IPR004632 4-aminobutyrate aminotransferase, bacterial RD05_RS11275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS11280 IPR013096 Cupin 2, conserved barrel RD05_RS11280 IPR014710 RmlC-like jelly roll fold RD05_RS11280 IPR011051 RmlC-like cupin domain superfamily RD05_RS11285 IPR023696 Ureohydrolase domain superfamily RD05_RS11285 IPR037138 Histone deacetylase domain superfamily RD05_RS11285 IPR023801 Histone deacetylase domain RD05_RS11285 IPR000286 Histone deacetylase family RD05_RS11290 IPR011650 Peptidase M20, dimerisation domain RD05_RS11290 IPR002933 Peptidase M20 RD05_RS11290 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS11290 IPR010158 Amidase, carbamoylase-type RD05_RS11300 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS11300 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS11300 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS11300 IPR015590 Aldehyde dehydrogenase domain RD05_RS11300 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS11300 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS11305 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS11305 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD05_RS11305 IPR023514 Glyoxylate/hydroxypyruvate reductase A RD05_RS11305 IPR036291 NAD(P)-binding domain superfamily RD05_RS11310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS11310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS11310 IPR005814 Aminotransferase class-III RD05_RS11310 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS11315 IPR001463 Sodium:alanine symporter RD05_RS11320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11320 IPR033186 Helicase HerA-like C-terminal RD05_RS11325 IPR017856 Integrase-like, N-terminal RD05_RS11325 IPR002876 Transcriptional regulator TACO1-like RD05_RS11325 IPR026564 Transcriptional regulator TACO1-like, domain 3 RD05_RS11325 IPR029072 YebC-like RD05_RS11330 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RD05_RS11330 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily RD05_RS11330 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS11330 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RD05_RS11330 IPR000115 Phosphoribosylglycinamide synthetase RD05_RS11330 IPR011761 ATP-grasp fold RD05_RS11330 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS11330 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD05_RS11330 IPR011054 Rudiment single hybrid motif RD05_RS11335 IPR018375 Coproporphyrinogen III oxidase, conserved site RD05_RS11335 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily RD05_RS11335 IPR001260 Coproporphyrinogen III oxidase, aerobic RD05_RS11340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS11340 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase RD05_RS11340 IPR004821 Cytidyltransferase-like domain RD05_RS11345 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RD05_RS11350 IPR003742 RNA methyltransferase RlmH RD05_RS11350 IPR029028 Alpha/beta knot methyltransferases RD05_RS11350 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS11355 IPR029001 Inosine triphosphate pyrophosphatase-like RD05_RS11355 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein RD05_RS11360 IPR003991 Pertactin virulence factor family RD05_RS11360 IPR004899 Pertactin, central region RD05_RS11360 IPR011050 Pectin lyase fold/virulence factor RD05_RS11360 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS11360 IPR006315 Outer membrane autotransporter barrel RD05_RS11360 IPR036709 Autotransporter beta-domain superfamily RD05_RS11360 IPR005546 Autotransporter beta-domain RD05_RS11400 IPR003029 S1 domain RD05_RS11400 IPR022967 RNA-binding domain, S1 RD05_RS11400 IPR004659 Ribonuclease E/G RD05_RS11400 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RD05_RS11400 IPR012340 Nucleic acid-binding, OB-fold RD05_RS11405 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RD05_RS11405 IPR001086 Prephenate dehydratase RD05_RS11405 IPR018528 Prephenate dehydratase, conserved site RD05_RS11405 IPR002912 ACT domain RD05_RS11415 IPR036259 MFS transporter superfamily RD05_RS11415 IPR020846 Major facilitator superfamily domain RD05_RS11415 IPR011701 Major facilitator superfamily RD05_RS11420 IPR003593 AAA+ ATPase domain RD05_RS11420 IPR017871 ABC transporter, conserved site RD05_RS11420 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS11420 IPR036640 ABC transporter type 1, transmembrane domain superfamily RD05_RS11420 IPR003439 ABC transporter-like RD05_RS11420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11420 IPR011917 ABC transporter, lipid A export, MsbA RD05_RS11425 IPR011910 ADP-heptose--LPS heptosyltransferase 2 RD05_RS11425 IPR002201 Glycosyl transferase, family 9 RD05_RS11435 IPR005358 Putative zinc- or iron-chelating domain containing protein RD05_RS11450 IPR000917 Sulfatase, N-terminal RD05_RS11450 IPR040423 Phosphoethanolamine transferase RD05_RS11450 IPR017850 Alkaline-phosphatase-like, core domain superfamily RD05_RS11455 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RD05_RS11455 IPR001296 Glycosyl transferase, family 1 RD05_RS11455 IPR017814 Mycothiol biosynthesis protein, MshA RD05_RS11460 IPR001173 Glycosyltransferase 2-like RD05_RS11460 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS11465 IPR002509 NodB homology domain RD05_RS11465 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS11470 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA RD05_RS11470 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RD05_RS11470 IPR001296 Glycosyl transferase, family 1 RD05_RS11475 IPR040982 DNA polymerase III alpha subunit finger domain RD05_RS11475 IPR004805 DNA polymerase III, alpha subunit RD05_RS11475 IPR016195 Polymerase/histidinol phosphatase-like RD05_RS11475 IPR003141 Polymerase/histidinol phosphatase, N-terminal RD05_RS11475 IPR004013 PHP domain RD05_RS11475 IPR029460 DNA polymerase, helix-hairpin-helix motif RD05_RS11475 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain RD05_RS11475 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain RD05_RS11475 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD05_RS11485 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11485 IPR010222 RNA helicase HrpA RD05_RS11485 IPR024590 RNA helicase HrpA, C-terminal RD05_RS11485 IPR001650 Helicase, C-terminal RD05_RS11485 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS11485 IPR003593 AAA+ ATPase domain RD05_RS11485 IPR011545 DEAD/DEAH box helicase domain RD05_RS11485 IPR011709 Domain of unknown function DUF1605 RD05_RS11485 IPR007502 Helicase-associated domain RD05_RS11490 IPR010167 Amino-acid N-acetyltransferase RD05_RS11490 IPR036393 Acetylglutamate kinase-like superfamily RD05_RS11490 IPR016181 Acyl-CoA N-acyltransferase RD05_RS11490 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS11490 IPR000182 GNAT domain RD05_RS11490 IPR033719 N-acetylglutamate synthase, kinase-like domain RD05_RS11495 IPR036766 Fe(II) trafficking protein YggX superfamily RD05_RS11495 IPR007457 Fe(II) trafficking protein YggX RD05_RS11500 IPR008475 Bacterial phospholipase C, C-terminal domain RD05_RS11500 IPR007312 Phosphoesterase RD05_RS11500 IPR017767 Bacterial phospholipase C, phosphocholine-specific RD05_RS11500 IPR017850 Alkaline-phosphatase-like, core domain superfamily RD05_RS11500 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS11505 IPR028366 Phosphate transport system protein PhoU RD05_RS11505 IPR038078 PhoU-like domain superfamily RD05_RS11505 IPR026022 PhoU domain RD05_RS11510 IPR004788 Ribose 5-phosphate isomerase, type A RD05_RS11510 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup RD05_RS11510 IPR037171 NagB/RpiA transferase-like RD05_RS11515 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS11515 IPR041504 Adaptive response protein AidB, N-terminal RD05_RS11515 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS11515 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS11515 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS11515 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS11515 IPR034184 Putative acyl-CoA dehydrogenase AidB RD05_RS11520 IPR003798 DNA recombination RmuC RD05_RS11530 IPR036995 Methylpurine-DNA glycosylase superfamily RD05_RS11530 IPR003180 Methylpurine-DNA glycosylase RD05_RS11530 IPR011034 Formyl transferase-like, C-terminal domain superfamily RD05_RS11540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS11540 IPR035906 MetI-like superfamily RD05_RS11545 IPR035906 MetI-like superfamily RD05_RS11545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS11550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11550 IPR013611 Transport-associated OB, type 2 RD05_RS11550 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit RD05_RS11550 IPR017871 ABC transporter, conserved site RD05_RS11550 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS11550 IPR003439 ABC transporter-like RD05_RS11550 IPR003593 AAA+ ATPase domain RD05_RS11555 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RD05_RS11555 IPR006059 Bacterial extracellular solute-binding protein RD05_RS11560 IPR011009 Protein kinase-like domain superfamily RD05_RS11560 IPR022826 3-deoxy-D-manno-octulosonic acid kinase RD05_RS11570 IPR038766 Membrane component of ABC transporter, predicted RD05_RS11575 IPR004682 TRAP transporter solute receptor, DctP family RD05_RS11575 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS11575 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS11585 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS11585 IPR004681 TRAP transporter large membrane protein DctM RD05_RS11585 IPR007387 TRAP transporter, small membrane protein DctQ RD05_RS11605 IPR002020 Citrate synthase RD05_RS11605 IPR016142 Citrate synthase-like, large alpha subdomain RD05_RS11605 IPR024176 Citrate synthase, bacterial-type RD05_RS11605 IPR010953 Citrate synthase, type I RD05_RS11605 IPR016143 Citrate synthase-like, small alpha subdomain RD05_RS11605 IPR019810 Citrate synthase active site RD05_RS11605 IPR036969 Citrate synthase superfamily RD05_RS11610 IPR036714 Flavinator of succinate dehydrogenase superfamily RD05_RS11610 IPR005631 Flavinator of succinate dehydrogenase RD05_RS11615 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RD05_RS11615 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RD05_RS11615 IPR009051 Alpha-helical ferredoxin RD05_RS11615 IPR012675 Beta-grasp domain superfamily RD05_RS11615 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS11615 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS11615 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS11615 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS11620 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RD05_RS11620 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS11620 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RD05_RS11620 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily RD05_RS11620 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RD05_RS11620 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RD05_RS11620 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RD05_RS11620 IPR011281 Succinate dehydrogenase, flavoprotein subunit RD05_RS11625 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit RD05_RS11625 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RD05_RS11625 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit RD05_RS11630 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit RD05_RS11630 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site RD05_RS11630 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit RD05_RS11630 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RD05_RS11635 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RD05_RS11635 IPR000524 Transcription regulator HTH, GntR RD05_RS11635 IPR011663 UbiC transcription regulator-associated RD05_RS11635 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS11635 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS11640 IPR001557 L-lactate/malate dehydrogenase RD05_RS11640 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RD05_RS11640 IPR022383 Lactate/malate dehydrogenase, C-terminal RD05_RS11640 IPR010945 Malate dehydrogenase, type 2 RD05_RS11640 IPR036291 NAD(P)-binding domain superfamily RD05_RS11640 IPR001236 Lactate/malate dehydrogenase, N-terminal RD05_RS11650 IPR016142 Citrate synthase-like, large alpha subdomain RD05_RS11650 IPR036969 Citrate synthase superfamily RD05_RS11650 IPR016143 Citrate synthase-like, small alpha subdomain RD05_RS11650 IPR002020 Citrate synthase RD05_RS11650 IPR024176 Citrate synthase, bacterial-type RD05_RS11650 IPR019810 Citrate synthase active site RD05_RS11650 IPR011278 2-methylcitrate synthase/citrate synthase type I RD05_RS11655 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD05_RS11655 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RD05_RS11655 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS11655 IPR006249 Aconitase/Iron-responsive element-binding protein 2 RD05_RS11655 IPR036008 Aconitase, iron-sulfur domain RD05_RS11655 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RD05_RS11655 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent RD05_RS11660 IPR012709 2-methyl-aconitate isomerase PrpF RD05_RS11660 IPR007400 PrpF protein RD05_RS11665 IPR012705 2-methylcitrate dehydratase PrpD RD05_RS11665 IPR036148 MmgE/PrpD superfamily RD05_RS11665 IPR042183 MmgE/PrpD superfamily, domain 1 RD05_RS11665 IPR005656 MmgE/PrpD RD05_RS11665 IPR042188 MmgE/PrpD superfamily, domain 2 RD05_RS11670 IPR005265 Protoporphyrinogen oxidase HemJ-like RD05_RS11675 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS11675 IPR000241 Putative RNA methylase domain RD05_RS11675 IPR004114 THUMP domain RD05_RS11675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS11695 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS11695 IPR000873 AMP-dependent synthetase/ligase RD05_RS11695 IPR020845 AMP-binding, conserved site RD05_RS11695 IPR011904 Acetate-CoA ligase RD05_RS11695 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS11695 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain RD05_RS11705 IPR000397 Heat shock protein Hsp33 RD05_RS11705 IPR016154 Heat shock protein Hsp33, C-terminal RD05_RS11705 IPR016153 Heat shock protein Hsp33, N-terminal RD05_RS11705 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily RD05_RS11730 IPR029787 Nucleotide cyclase RD05_RS11730 IPR011990 Tetratricopeptide-like helical domain superfamily RD05_RS11730 IPR013026 Tetratricopeptide repeat-containing domain RD05_RS11730 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RD05_RS11730 IPR019734 Tetratricopeptide repeat RD05_RS11735 IPR023081 Cell division protein FtsB RD05_RS11735 IPR007060 Septum formation initiator FtsL/DivIC RD05_RS11740 IPR000941 Enolase RD05_RS11740 IPR020811 Enolase, N-terminal RD05_RS11740 IPR020809 Enolase, conserved site RD05_RS11740 IPR020810 Enolase, C-terminal TIM barrel domain RD05_RS11740 IPR029017 Enolase-like, N-terminal RD05_RS11740 IPR036849 Enolase-like, C-terminal domain superfamily RD05_RS11750 IPR006269 3-deoxy-8-phosphooctulonate synthase RD05_RS11750 IPR013785 Aldolase-type TIM barrel RD05_RS11750 IPR006218 DAHP synthetase I/KDSA RD05_RS11755 IPR029062 Class I glutamine amidotransferase-like RD05_RS11755 IPR004468 CTP synthase RD05_RS11755 IPR017456 CTP synthase, N-terminal RD05_RS11755 IPR033828 CTP synthase GATase domain RD05_RS11755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11755 IPR017926 Glutamine amidotransferase RD05_RS11765 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RD05_RS11765 IPR036005 Creatinase/aminopeptidase-like RD05_RS11765 IPR000587 Creatinase, N-terminal RD05_RS11765 IPR000994 Peptidase M24 RD05_RS11765 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RD05_RS11775 IPR005321 Peptidase S58, DmpA RD05_RS11775 IPR016117 ArgJ-like domain superfamily RD05_RS11780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS11780 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS11780 IPR035906 MetI-like superfamily RD05_RS11785 IPR035906 MetI-like superfamily RD05_RS11785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS11790 IPR000914 Solute-binding protein family 5 domain RD05_RS11790 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS11790 IPR039424 Solute-binding protein family 5 RD05_RS11795 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS11795 IPR003439 ABC transporter-like RD05_RS11795 IPR003593 AAA+ ATPase domain RD05_RS11795 IPR017871 ABC transporter, conserved site RD05_RS11795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11800 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS11800 IPR000246 Peptidase T2, asparaginase 2 RD05_RS11810 IPR004165 Coenzyme A transferase family I RD05_RS11810 IPR037171 NagB/RpiA transferase-like RD05_RS11810 IPR004164 Coenzyme A transferase active site RD05_RS11810 IPR012791 3-oxoacid CoA-transferase, subunit B RD05_RS11825 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS11825 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase RD05_RS11825 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS11830 IPR016040 NAD(P)-binding domain RD05_RS11830 IPR036291 NAD(P)-binding domain superfamily RD05_RS11830 IPR005886 UDP-glucose 4-epimerase RD05_RS11845 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS11845 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS11845 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase RD05_RS11845 IPR023603 Threonine aldolase RD05_RS11845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS11850 IPR000620 EamA domain RD05_RS11855 IPR011904 Acetate-CoA ligase RD05_RS11855 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS11855 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS11855 IPR000873 AMP-dependent synthetase/ligase RD05_RS11855 IPR020845 AMP-binding, conserved site RD05_RS11855 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain RD05_RS11865 IPR038084 GlcG-like domain superfamily RD05_RS11865 IPR005624 Haem-degrading RD05_RS11870 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS11870 IPR000873 AMP-dependent synthetase/ligase RD05_RS11870 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain RD05_RS11870 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS11870 IPR012694 Propionate--CoA ligase RD05_RS11870 IPR020845 AMP-binding, conserved site RD05_RS11875 IPR000064 Endopeptidase, NLPC/P60 domain RD05_RS11875 IPR038765 Papain-like cysteine peptidase superfamily RD05_RS11890 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS11890 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain RD05_RS11890 IPR005119 LysR, substrate-binding RD05_RS11890 IPR000847 Transcription regulator HTH, LysR RD05_RS11890 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS11895 IPR015590 Aldehyde dehydrogenase domain RD05_RS11895 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS11895 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS11895 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS11895 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS11895 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD05_RS11905 IPR000847 Transcription regulator HTH, LysR RD05_RS11905 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS11905 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS11905 IPR005119 LysR, substrate-binding RD05_RS11915 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B RD05_RS11915 IPR023042 Peptidase M17, leucine aminopeptidase RD05_RS11915 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RD05_RS11915 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RD05_RS11920 IPR036768 DNA polymerase III subunit chi superfamily RD05_RS11920 IPR007459 DNA polymerase III chi subunit, HolC RD05_RS11930 IPR006213 Bax inhibitor 1, conserved site RD05_RS11930 IPR006214 Bax inhibitor 1-related RD05_RS11935 IPR042100 Bordetella uptake gene, domain 1 RD05_RS11935 IPR005064 Bordetella uptake gene RD05_RS11950 IPR005859 Cysteine synthase CysK RD05_RS11950 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RD05_RS11950 IPR005856 Cysteine synthase RD05_RS11950 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS11950 IPR001926 Pyridoxal-phosphate dependent enzyme RD05_RS11960 IPR012340 Nucleic acid-binding, OB-fold RD05_RS11960 IPR003717 Recombination protein O, RecO RD05_RS11960 IPR022572 DNA replication/recombination mediator RecO, N-terminal RD05_RS11960 IPR037278 ARFGAP/RecO-like zinc finger RD05_RS11965 IPR004044 K Homology domain, type 2 RD05_RS11965 IPR005225 Small GTP-binding protein domain RD05_RS11965 IPR030388 Era-type guanine nucleotide-binding (G) domain RD05_RS11965 IPR006073 GTP binding domain RD05_RS11965 IPR009019 K homology domain superfamily, prokaryotic type RD05_RS11965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11965 IPR015946 K homology domain-like, alpha/beta RD05_RS11965 IPR005662 GTP-binding protein Era RD05_RS11970 IPR011907 Ribonuclease III RD05_RS11970 IPR000999 Ribonuclease III domain RD05_RS11970 IPR014720 Double-stranded RNA-binding domain RD05_RS11970 IPR036389 Ribonuclease III, endonuclease domain superfamily RD05_RS11975 IPR036286 LexA/Signal peptidase-like superfamily RD05_RS11975 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RD05_RS11975 IPR019758 Peptidase S26A, signal peptidase I, conserved site RD05_RS11975 IPR000223 Peptidase S26A, signal peptidase I RD05_RS11975 IPR019756 Peptidase S26A, signal peptidase I, serine active site RD05_RS11975 IPR019533 Peptidase S26 RD05_RS11980 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS11980 IPR000795 Transcription factor, GTP-binding domain RD05_RS11980 IPR005225 Small GTP-binding protein domain RD05_RS11980 IPR035654 Elongation factor 4, domain IV RD05_RS11980 IPR013842 GTP-binding protein LepA, C-terminal RD05_RS11980 IPR038363 LepA, C-terminal domain superfamily RD05_RS11980 IPR031157 Tr-type G domain, conserved site RD05_RS11980 IPR004161 Translation elongation factor EFTu-like, domain 2 RD05_RS11980 IPR000640 Elongation factor EFG, domain V-like RD05_RS11980 IPR035647 EF-G domain III/V-like RD05_RS11980 IPR006297 Elongation factor 4 RD05_RS11980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11985 IPR001478 PDZ domain RD05_RS11985 IPR001940 Peptidase S1C RD05_RS11985 IPR036034 PDZ superfamily RD05_RS11985 IPR011782 Peptidase S1C, Do RD05_RS11985 IPR009003 Peptidase S1, PA clan RD05_RS12000 IPR039425 RNA polymerase sigma-70 like RD05_RS12000 IPR014284 RNA polymerase sigma-70 like domain RD05_RS12000 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD05_RS12000 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS12000 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS12000 IPR014286 RNA polymerase sigma-70 RpoE type RD05_RS12000 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS12000 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS12000 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS12010 IPR014030 Beta-ketoacyl synthase, N-terminal RD05_RS12010 IPR014031 Beta-ketoacyl synthase, C-terminal RD05_RS12010 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RD05_RS12010 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RD05_RS12010 IPR000794 Beta-ketoacyl synthase RD05_RS12010 IPR018201 Beta-ketoacyl synthase, active site RD05_RS12010 IPR016039 Thiolase-like RD05_RS12015 IPR009081 Phosphopantetheine binding ACP domain RD05_RS12015 IPR006162 Phosphopantetheine attachment site RD05_RS12015 IPR036736 ACP-like superfamily RD05_RS12015 IPR003231 Acyl carrier protein (ACP) RD05_RS12020 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS12020 IPR036291 NAD(P)-binding domain superfamily RD05_RS12020 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS12020 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS12025 IPR014043 Acyl transferase RD05_RS12025 IPR001227 Acyl transferase domain superfamily RD05_RS12025 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RD05_RS12025 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RD05_RS12025 IPR024925 Malonyl CoA-acyl carrier protein transacylase RD05_RS12025 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD05_RS12030 IPR016039 Thiolase-like RD05_RS12030 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RD05_RS12030 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RD05_RS12030 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD05_RS12035 IPR003664 Fatty acid synthesis PlsX protein RD05_RS12035 IPR012281 Phospholipid biosynthesis protein, PlsX-like RD05_RS12040 IPR011332 Zinc-binding ribosomal protein RD05_RS12040 IPR002677 Ribosomal protein L32p RD05_RS12045 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria RD05_RS12045 IPR003772 Large ribosomal RNA subunit accumulation protein YceD RD05_RS12050 IPR029001 Inosine triphosphate pyrophosphatase-like RD05_RS12050 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein RD05_RS12060 IPR036366 PGBD superfamily RD05_RS12060 IPR036365 PGBD-like superfamily RD05_RS12060 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RD05_RS12060 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily RD05_RS12065 IPR032692 Integral membrane protein YccS, N-terminal RD05_RS12075 IPR005583 Peroxide stress protein YaaA RD05_RS12090 IPR011060 Ribulose-phosphate binding barrel RD05_RS12090 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) RD05_RS12090 IPR013785 Aldolase-type TIM barrel RD05_RS12095 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS12095 IPR004681 TRAP transporter large membrane protein DctM RD05_RS12105 IPR026289 Solute binding protein, TakP-like RD05_RS12105 IPR041722 Alpha-keto acid binding periplasmic protein RD05_RS12105 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS12105 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS12105 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS12110 IPR020103 Pseudouridine synthase, catalytic domain superfamily RD05_RS12110 IPR020095 Pseudouridine synthase I, TruA, C-terminal RD05_RS12110 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RD05_RS12110 IPR001406 Pseudouridine synthase I, TruA RD05_RS12120 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type RD05_RS12120 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RD05_RS12120 IPR036291 NAD(P)-binding domain superfamily RD05_RS12120 IPR012080 Aspartate-semialdehyde dehydrogenase RD05_RS12120 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RD05_RS12120 IPR000534 Semialdehyde dehydrogenase, NAD-binding RD05_RS12125 IPR004429 Isopropylmalate dehydrogenase RD05_RS12125 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS12125 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD05_RS12130 IPR004431 3-isopropylmalate dehydratase, small subunit RD05_RS12130 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RD05_RS12130 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS12130 IPR033940 3-isopropylmalate dehydratase, swivel domain RD05_RS12135 IPR033941 3-Isopropylmalate dehydratase, catalytic domain RD05_RS12135 IPR036008 Aconitase, iron-sulfur domain RD05_RS12135 IPR004430 3-isopropylmalate dehydratase, large subunit RD05_RS12135 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD05_RS12135 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD05_RS12135 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RD05_RS12140 IPR024370 PBP domain RD05_RS12145 IPR017871 ABC transporter, conserved site RD05_RS12145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12145 IPR003439 ABC transporter-like RD05_RS12145 IPR003593 AAA+ ATPase domain RD05_RS12150 IPR035906 MetI-like superfamily RD05_RS12150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS12175 IPR000813 7Fe ferredoxin RD05_RS12175 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS12175 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS12180 IPR006443 Formate dehydrogenase-N, alpha subunit RD05_RS12180 IPR006657 Molybdopterin dinucleotide-binding domain RD05_RS12180 IPR006656 Molybdopterin oxidoreductase RD05_RS12180 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RD05_RS12180 IPR009010 Aspartate decarboxylase-like domain superfamily RD05_RS12180 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS12180 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RD05_RS12180 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RD05_RS12210 IPR000808 Mrp, conserved site RD05_RS12210 IPR019591 Mrp/NBP35 ATP-binding protein RD05_RS12210 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 RD05_RS12210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12215 IPR013482 Molybdenum cofactor guanylyltransferase RD05_RS12215 IPR025877 MobA-like NTP transferase RD05_RS12215 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS12220 IPR036135 MoeA, N-terminal and linker domain superfamily RD05_RS12220 IPR036425 MoaB/Mog-like domain superfamily RD05_RS12220 IPR036688 MoeA, C-terminal, domain IV superfamily RD05_RS12220 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD05_RS12220 IPR005110 MoeA, N-terminal and linker domain RD05_RS12220 IPR038987 Molybdopterin biosynthesis protein MoeA-like RD05_RS12220 IPR005111 MoeA, C-terminal, domain IV RD05_RS12220 IPR001453 MoaB/Mog domain RD05_RS12225 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain RD05_RS12225 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12230 IPR011990 Tetratricopeptide-like helical domain superfamily RD05_RS12230 IPR030873 Beta-barrel assembly-enhancing protease RD05_RS12230 IPR001915 Peptidase M48 RD05_RS12235 IPR035904 Chorismate synthase AroC superfamily RD05_RS12235 IPR020541 Chorismate synthase, conserved site RD05_RS12235 IPR000453 Chorismate synthase RD05_RS12240 IPR035965 PAS domain superfamily RD05_RS12240 IPR001610 PAC motif RD05_RS12240 IPR029787 Nucleotide cyclase RD05_RS12240 IPR000160 GGDEF domain RD05_RS12240 IPR035919 EAL domain superfamily RD05_RS12240 IPR001633 EAL domain RD05_RS12240 IPR000014 PAS domain RD05_RS12240 IPR013656 PAS fold-4 RD05_RS12240 IPR013655 PAS fold-3 RD05_RS12240 IPR000700 PAS-associated, C-terminal RD05_RS12255 IPR011867 Molybdate ABC transporter, permease protein RD05_RS12255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS12255 IPR035906 MetI-like superfamily RD05_RS12255 IPR006469 NifC-like ABC-type porter RD05_RS12260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12260 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS12260 IPR015853 ABC transporter, ferric cation import, FbpC RD05_RS12260 IPR017871 ABC transporter, conserved site RD05_RS12260 IPR003439 ABC transporter-like RD05_RS12260 IPR003593 AAA+ ATPase domain RD05_RS12260 IPR013611 Transport-associated OB, type 2 RD05_RS12265 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS12265 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS12265 IPR000847 Transcription regulator HTH, LysR RD05_RS12265 IPR005119 LysR, substrate-binding RD05_RS12270 IPR023086 Phosphoglycerate mutase, GpmB, probable RD05_RS12270 IPR029033 Histidine phosphatase superfamily RD05_RS12270 IPR013078 Histidine phosphatase superfamily, clade-1 RD05_RS12270 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RD05_RS12280 IPR011761 ATP-grasp fold RD05_RS12280 IPR006275 Carbamoyl-phosphate synthase, large subunit RD05_RS12280 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RD05_RS12280 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS12280 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RD05_RS12280 IPR011607 Methylglyoxal synthase-like domain RD05_RS12280 IPR036914 Methylglyoxal synthase-like domain superfamily RD05_RS12280 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain RD05_RS12280 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS12280 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily RD05_RS12285 IPR017926 Glutamine amidotransferase RD05_RS12285 IPR029062 Class I glutamine amidotransferase-like RD05_RS12285 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain RD05_RS12285 IPR006274 Carbamoyl-phosphate synthase, small subunit RD05_RS12285 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain RD05_RS12285 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily RD05_RS12290 IPR018225 Transaldolase, active site RD05_RS12290 IPR004730 Transaldolase type 1 RD05_RS12290 IPR001585 Transaldolase/Fructose-6-phosphate aldolase RD05_RS12290 IPR013785 Aldolase-type TIM barrel RD05_RS12315 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD05_RS12315 IPR036291 NAD(P)-binding domain superfamily RD05_RS12315 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RD05_RS12315 IPR011548 3-hydroxyisobutyrate dehydrogenase RD05_RS12315 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS12315 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS12315 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD05_RS12315 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS12320 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB RD05_RS12320 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS12320 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS12320 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS12320 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS12325 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS12325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS12325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS12325 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS12325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS12325 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS12325 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS12330 IPR033655 RelA, TGS domain RD05_RS12330 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD05_RS12330 IPR037021 RnfH superfamily RD05_RS12330 IPR005346 RnfH protein RD05_RS12335 IPR005031 Coenzyme Q-binding protein COQ10, START domain RD05_RS12335 IPR023393 START-like domain superfamily RD05_RS12345 IPR020081 SsrA-binding protein, conserved site RD05_RS12345 IPR023620 Small protein B RD05_RS12345 IPR000037 SsrA-binding protein RD05_RS12350 IPR013656 PAS fold-4 RD05_RS12350 IPR000160 GGDEF domain RD05_RS12350 IPR029787 Nucleotide cyclase RD05_RS12350 IPR000014 PAS domain RD05_RS12350 IPR000700 PAS-associated, C-terminal RD05_RS12350 IPR035965 PAS domain superfamily RD05_RS12355 IPR001972 Stomatin family RD05_RS12355 IPR032435 Band 7, C-terminal extension RD05_RS12355 IPR018080 Band 7/stomatin-like, conserved site RD05_RS12355 IPR036013 Band 7/SPFH domain superfamily RD05_RS12355 IPR001107 Band 7 domain RD05_RS12370 IPR017926 Glutamine amidotransferase RD05_RS12370 IPR004739 GMP synthase, glutamine amidotransferase RD05_RS12370 IPR022955 GMP synthase RD05_RS12370 IPR001674 GMP synthase, C-terminal RD05_RS12370 IPR029062 Class I glutamine amidotransferase-like RD05_RS12370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS12370 IPR025777 GMP synthetase ATP pyrophosphatase domain RD05_RS12375 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS12375 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS12375 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RD05_RS12375 IPR036637 Phosphohistidine domain superfamily RD05_RS12375 IPR023151 PEP-utilising enzyme, conserved site RD05_RS12375 IPR000121 PEP-utilising enzyme, C-terminal RD05_RS12375 IPR006319 Phosphoenolpyruvate synthase RD05_RS12375 IPR008279 PEP-utilising enzyme, mobile domain RD05_RS12375 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS12375 IPR018274 PEP-utilising enzyme, active site RD05_RS12380 IPR026530 Phosphoenolpyruvate synthase regulatory protein RD05_RS12380 IPR005177 Bifunctional kinase-pyrophosphorylase RD05_RS12385 IPR029064 50S ribosomal protein L30e-like RD05_RS12385 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD05_RS12385 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RD05_RS12385 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS12385 IPR029028 Alpha/beta knot methyltransferases RD05_RS12390 IPR001352 Ribonuclease HII/HIII RD05_RS12390 IPR022898 Ribonuclease HII RD05_RS12390 IPR024567 Ribonuclease HII/HIII domain RD05_RS12390 IPR012337 Ribonuclease H-like superfamily RD05_RS12390 IPR036397 Ribonuclease H superfamily RD05_RS12395 IPR003835 Glycosyl transferase, family 19 RD05_RS12400 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily RD05_RS12400 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RD05_RS12400 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal RD05_RS12400 IPR011004 Trimeric LpxA-like superfamily RD05_RS12400 IPR001451 Hexapeptide repeat RD05_RS12405 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RD05_RS12405 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RD05_RS12405 IPR029069 HotDog domain superfamily RD05_RS12410 IPR001451 Hexapeptide repeat RD05_RS12410 IPR018357 Hexapeptide transferase, conserved site RD05_RS12410 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD RD05_RS12410 IPR011004 Trimeric LpxA-like superfamily RD05_RS12410 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RD05_RS12415 IPR005632 Chaperone protein Skp RD05_RS12415 IPR024930 Skp domain superfamily RD05_RS12420 IPR023707 Outer membrane protein assembly factor BamA RD05_RS12420 IPR039910 Surface antigen D15-like RD05_RS12420 IPR034746 POTRA domain RD05_RS12420 IPR000184 Bacterial surface antigen (D15) RD05_RS12420 IPR010827 POTRA domain, BamA/TamA-like RD05_RS12425 IPR001478 PDZ domain RD05_RS12425 IPR008915 Peptidase M50 RD05_RS12425 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RD05_RS12425 IPR036034 PDZ superfamily RD05_RS12425 IPR041489 PDZ domain 6 RD05_RS12430 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD05_RS12430 IPR036169 DXP reductoisomerase, C-terminal domain superfamily RD05_RS12430 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal RD05_RS12430 IPR036291 NAD(P)-binding domain superfamily RD05_RS12430 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal RD05_RS12430 IPR026877 DXP reductoisomerase C-terminal domain RD05_RS12435 IPR000374 Phosphatidate cytidylyltransferase RD05_RS12440 IPR036424 Decaprenyl diphosphate synthase-like superfamily RD05_RS12440 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RD05_RS12440 IPR001441 Decaprenyl diphosphate synthase-like RD05_RS12445 IPR036191 RRF superfamily RD05_RS12445 IPR002661 Ribosome recycling factor RD05_RS12445 IPR023584 Ribosome recycling factor domain RD05_RS12450 IPR036393 Acetylglutamate kinase-like superfamily RD05_RS12450 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS12450 IPR011817 Uridylate kinase RD05_RS12450 IPR015963 Uridylate kinase, bacteria RD05_RS12455 IPR001816 Translation elongation factor EFTs/EF1B RD05_RS12455 IPR009060 UBA-like superfamily RD05_RS12455 IPR036402 Elongation factor Ts, dimerisation domain superfamily RD05_RS12455 IPR018101 Translation elongation factor Ts, conserved site RD05_RS12455 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RD05_RS12460 IPR001865 Ribosomal protein S2 RD05_RS12460 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RD05_RS12460 IPR018130 Ribosomal protein S2, conserved site RD05_RS12460 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily RD05_RS12465 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RD05_RS12465 IPR000994 Peptidase M24 RD05_RS12465 IPR036005 Creatinase/aminopeptidase-like RD05_RS12465 IPR001714 Peptidase M24, methionine aminopeptidase RD05_RS12470 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme RD05_RS12470 IPR006674 HD domain RD05_RS12470 IPR002934 Polymerase, nucleotidyl transferase domain RD05_RS12470 IPR002912 ACT domain RD05_RS12470 IPR003607 HD/PDEase domain RD05_RS12470 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RD05_RS12485 IPR005854 Amidophosphoribosyltransferase RD05_RS12485 IPR035584 Amidophosphoribosyltransferase, N-terminal RD05_RS12485 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS12485 IPR029057 Phosphoribosyltransferase-like RD05_RS12485 IPR000836 Phosphoribosyltransferase domain RD05_RS12485 IPR017932 Glutamine amidotransferase type 2 domain RD05_RS12500 IPR018109 Folylpolyglutamate synthetase, conserved site RD05_RS12500 IPR001645 Folylpolyglutamate synthetase RD05_RS12500 IPR013221 Mur ligase, central RD05_RS12500 IPR036615 Mur ligase, C-terminal domain superfamily RD05_RS12500 IPR004101 Mur ligase, C-terminal RD05_RS12500 IPR036565 Mur-like, catalytic domain superfamily RD05_RS12510 IPR010810 Flagellin hook, IN motif RD05_RS12510 IPR040026 Flagellar hook-associated protein 2 RD05_RS12510 IPR010809 Flagellar hook-associated protein 2, C-terminal RD05_RS12510 IPR003481 Flagellar hook-associated protein 2, N-terminal RD05_RS12515 IPR036584 Flagellar protein FliS superfamily RD05_RS12515 IPR003713 Flagellar protein FliS RD05_RS12535 IPR029025 Type III secretion system substrate exporter, C-terminal RD05_RS12535 IPR006135 Type III secretion system substrate exporter RD05_RS12535 IPR006136 Flagellar biosynthetic protein FlhB RD05_RS12545 IPR001624 Flagellar hook-basal body complex protein FliE RD05_RS12550 IPR006182 Secretory protein YscJ/FliF RD05_RS12550 IPR013556 Flagellar M-ring C-terminal RD05_RS12550 IPR000067 Flagellar M-ring protein FliF RD05_RS12555 IPR032779 Flagellar motor switch protein FliG, middle domain RD05_RS12555 IPR000090 Flagellar motor switch protein FliG RD05_RS12555 IPR023087 Flagellar motor switch protein FliG, C-terminal RD05_RS12555 IPR011002 Flagellar motor switch protein FliG, alpha-helical RD05_RS12555 IPR028263 Flagellar motor switch protein FliG, N-terminal domain RD05_RS12565 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD05_RS12565 IPR003593 AAA+ ATPase domain RD05_RS12565 IPR040627 T3SS EscN ATPase, C-terminal RD05_RS12565 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS12565 IPR032463 ATPase, type III secretion system, FliI RD05_RS12565 IPR005714 ATPase, type III secretion system, FliI/YscN RD05_RS12565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12565 IPR020005 Flagellar export ATPase FliI, clade 1 RD05_RS12590 IPR005503 Flagellar basal body-associated protein FliL RD05_RS12595 IPR001543 Surface presentation of antigen (SpoA) RD05_RS12595 IPR001689 Flagellar motor switch protein FliM RD05_RS12595 IPR028976 CheC-like superfamily RD05_RS12595 IPR036429 SpoA-like superfamily RD05_RS12600 IPR012826 Flagellar motor switch FliN RD05_RS12600 IPR001543 Surface presentation of antigen (SpoA) RD05_RS12600 IPR031576 Flagellar motor switch protein FliN, N-terminal RD05_RS12600 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb RD05_RS12600 IPR036429 SpoA-like superfamily RD05_RS12605 IPR022781 Flagellar biosynthesis protein, FliO RD05_RS12610 IPR005838 Type III secretion system inner membrane P protein RD05_RS12610 IPR005837 Flagellar transport protein FliP RD05_RS12615 IPR002191 Bacterial export protein family 3 RD05_RS12615 IPR006305 Flagellar biosynthesis protein FliQ RD05_RS12620 IPR002010 Type III secretion system inner membrane R protein RD05_RS12620 IPR006303 Flagellar biosynthesis protein FliR RD05_RS12630 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS12630 IPR003660 HAMP domain RD05_RS12630 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS12630 IPR035965 PAS domain superfamily RD05_RS12630 IPR001610 PAC motif RD05_RS12630 IPR000014 PAS domain RD05_RS12630 IPR013655 PAS fold-3 RD05_RS12635 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily RD05_RS12635 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site RD05_RS12635 IPR003660 HAMP domain RD05_RS12635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS12635 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding RD05_RS12635 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS12640 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily RD05_RS12640 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS12640 IPR003660 HAMP domain RD05_RS12640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS12640 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding RD05_RS12640 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site RD05_RS12645 IPR013384 Flagellar hook-associated protein 3 RD05_RS12645 IPR001029 Flagellin, D0/D1 domain RD05_RS12650 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12650 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12650 IPR002371 Flagellar hook-associated protein 1 RD05_RS12655 IPR013377 Peptidoglycan hydrolase FlgJ RD05_RS12655 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RD05_RS12655 IPR019301 Flagellar protein FlgJ, N-terminal RD05_RS12660 IPR001782 Flagellar P-ring protein RD05_RS12665 IPR000527 Flagellar L-ring protein RD05_RS12670 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12670 IPR012834 Flagellar basal-body rod FlgG RD05_RS12670 IPR020013 Flagellar hook-basal body protein, FlgE/F/G RD05_RS12670 IPR019776 Flagellar basal body rod protein, conserved site RD05_RS12670 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12670 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like RD05_RS12675 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12675 IPR020013 Flagellar hook-basal body protein, FlgE/F/G RD05_RS12675 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12675 IPR019776 Flagellar basal body rod protein, conserved site RD05_RS12675 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like RD05_RS12680 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like RD05_RS12680 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12680 IPR011491 Flagellar hook protein FlgE RD05_RS12680 IPR020013 Flagellar hook-basal body protein, FlgE/F/G RD05_RS12680 IPR019776 Flagellar basal body rod protein, conserved site RD05_RS12680 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12680 IPR037058 Flagellar hook protein FlgE superfamily RD05_RS12685 IPR025965 FlgD Ig-like domain RD05_RS12685 IPR005648 Flagellar hook capping protein RD05_RS12685 IPR025963 FlgD Tudor-like domain RD05_RS12690 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12690 IPR006299 Flagellar basal-body rod protein FlgC RD05_RS12690 IPR019776 Flagellar basal body rod protein, conserved site RD05_RS12690 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12695 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12695 IPR006300 Flagellar basal-body rod protein FlgB RD05_RS12695 IPR019776 Flagellar basal body rod protein, conserved site RD05_RS12705 IPR035890 Anti-sigma-28 factor FlgM superfamily RD05_RS12705 IPR031316 Anti-sigma-28 factor FlgM, C-terminal RD05_RS12705 IPR007412 Anti-sigma-28 factor, FlgM RD05_RS12715 IPR003593 AAA+ ATPase domain RD05_RS12715 IPR020006 Flagellar biosynthesis protein FlhF RD05_RS12715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12715 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD05_RS12725 IPR006136 Flagellar biosynthetic protein FlhB RD05_RS12725 IPR006135 Type III secretion system substrate exporter RD05_RS12725 IPR029025 Type III secretion system substrate exporter, C-terminal RD05_RS12735 IPR018313 Solute-binding protein family 3, conserved site RD05_RS12735 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS12740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS12740 IPR035906 MetI-like superfamily RD05_RS12740 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS12745 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS12745 IPR003439 ABC transporter-like RD05_RS12745 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12745 IPR017871 ABC transporter, conserved site RD05_RS12745 IPR003593 AAA+ ATPase domain RD05_RS12755 IPR003710 Ketopantoate reductase ApbA/PanE RD05_RS12755 IPR013752 Ketopantoate reductase, C-terminal domain RD05_RS12755 IPR013332 Ketopantoate reductase, N-terminal domain RD05_RS12755 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS12755 IPR036291 NAD(P)-binding domain superfamily RD05_RS12755 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS12760 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RD05_RS12760 IPR029065 Enolase C-terminal domain-like RD05_RS12760 IPR036849 Enolase-like, C-terminal domain superfamily RD05_RS12760 IPR034611 D-tartrate dehydratase RD05_RS12760 IPR034593 Mandelate racemase-like RD05_RS12760 IPR029017 Enolase-like, N-terminal RD05_RS12765 IPR042100 Bordetella uptake gene, domain 1 RD05_RS12765 IPR005064 Bordetella uptake gene RD05_RS12775 IPR004431 3-isopropylmalate dehydratase, small subunit RD05_RS12775 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RD05_RS12775 IPR033940 3-isopropylmalate dehydratase, swivel domain RD05_RS12775 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS12780 IPR000843 LacI-type HTH domain RD05_RS12780 IPR006377 Catabolite control protein A RD05_RS12780 IPR028082 Periplasmic binding protein-like I RD05_RS12780 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RD05_RS12785 IPR042100 Bordetella uptake gene, domain 1 RD05_RS12785 IPR005064 Bordetella uptake gene RD05_RS12790 IPR003673 CoA-transferase family III RD05_RS12790 IPR023606 CoA-transferase family III domain superfamily RD05_RS12800 IPR005064 Bordetella uptake gene RD05_RS12800 IPR042100 Bordetella uptake gene, domain 1 RD05_RS12805 IPR003781 CoA-binding RD05_RS12805 IPR011761 ATP-grasp fold RD05_RS12805 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RD05_RS12805 IPR016102 Succinyl-CoA synthetase-like RD05_RS12805 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS12805 IPR036291 NAD(P)-binding domain superfamily RD05_RS12810 IPR011711 GntR, C-terminal RD05_RS12810 IPR000524 Transcription regulator HTH, GntR RD05_RS12810 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS12810 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS12810 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS12815 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS12815 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD05_RS12815 IPR011206 Citrate lyase beta subunit-like RD05_RS12815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS12825 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS12825 IPR000847 Transcription regulator HTH, LysR RD05_RS12825 IPR005119 LysR, substrate-binding RD05_RS12825 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS12835 IPR011050 Pectin lyase fold/virulence factor RD05_RS12835 IPR005546 Autotransporter beta-domain RD05_RS12835 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS12835 IPR036709 Autotransporter beta-domain superfamily RD05_RS12835 IPR013425 Autotransporter-associated beta strand repeat RD05_RS12835 IPR006315 Outer membrane autotransporter barrel RD05_RS12845 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS12845 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS12845 IPR005149 Transcription regulator PadR, N-terminal RD05_RS12850 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RD05_RS12850 IPR005135 Endonuclease/exonuclease/phosphatase RD05_RS12855 IPR030872 Cardiolipin synthase B RD05_RS12855 IPR025202 Phospholipase D-like domain RD05_RS12855 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS12870 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RD05_RS12900 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S RD05_RS12900 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12900 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase RD05_RS12900 IPR013780 Glycosyl hydrolase, all-beta RD05_RS12900 IPR017853 Glycoside hydrolase superfamily RD05_RS12900 IPR013783 Immunoglobulin-like fold RD05_RS12905 IPR012810 Trehalose synthase/alpha-amylase, N-terminal RD05_RS12905 IPR032091 Maltogenic Amylase, C-terminal RD05_RS12905 IPR017853 Glycoside hydrolase superfamily RD05_RS12905 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12905 IPR013780 Glycosyl hydrolase, all-beta RD05_RS12910 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB RD05_RS12910 IPR004193 Glycoside hydrolase, family 13, N-terminal RD05_RS12910 IPR013780 Glycosyl hydrolase, all-beta RD05_RS12910 IPR017853 Glycoside hydrolase superfamily RD05_RS12910 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12910 IPR013783 Immunoglobulin-like fold RD05_RS12910 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta RD05_RS12910 IPR037439 1,4-alpha-glucan-branching enzyme RD05_RS12910 IPR014756 Immunoglobulin E-set RD05_RS12915 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12915 IPR004193 Glycoside hydrolase, family 13, N-terminal RD05_RS12915 IPR013780 Glycosyl hydrolase, all-beta RD05_RS12915 IPR017853 Glycoside hydrolase superfamily RD05_RS12915 IPR013783 Immunoglobulin-like fold RD05_RS12915 IPR014756 Immunoglobulin E-set RD05_RS12915 IPR011837 Glycogen debranching enzyme, GlgX type RD05_RS12920 IPR017853 Glycoside hydrolase superfamily RD05_RS12920 IPR012768 Malto-oligosyltrehalose trehalohydrolase RD05_RS12920 IPR013780 Glycosyl hydrolase, all-beta RD05_RS12920 IPR013783 Immunoglobulin-like fold RD05_RS12920 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) RD05_RS12920 IPR004193 Glycoside hydrolase, family 13, N-terminal RD05_RS12920 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12920 IPR014756 Immunoglobulin E-set RD05_RS12930 IPR017853 Glycoside hydrolase superfamily RD05_RS12930 IPR003385 Glycoside hydrolase, family 77 RD05_RS12935 IPR017853 Glycoside hydrolase superfamily RD05_RS12935 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12935 IPR012767 Maltooligosyl trehalose synthase RD05_RS12945 IPR029056 Ribokinase-like RD05_RS12945 IPR004625 Pyridoxine kinase RD05_RS12945 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD05_RS12945 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase RD05_RS12950 IPR029066 PLP-binding barrel RD05_RS12950 IPR011078 Pyridoxal phosphate homeostasis protein RD05_RS12950 IPR001608 Alanine racemase, N-terminal RD05_RS12955 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS12955 IPR004839 Aminotransferase, class I/classII RD05_RS12955 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS12955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS12955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS12955 IPR000524 Transcription regulator HTH, GntR RD05_RS12955 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS12970 IPR006016 UspA RD05_RS12970 IPR006015 Universal stress protein A family RD05_RS12970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS12975 IPR036812 NADP-dependent oxidoreductase domain superfamily RD05_RS12975 IPR023210 NADP-dependent oxidoreductase domain RD05_RS12975 IPR020471 Aldo/keto reductase RD05_RS12985 IPR001570 Peptidase M4, C-terminal RD05_RS12985 IPR027268 Peptidase M4/M1, CTD superfamily RD05_RS12985 IPR023612 Peptidase M4 RD05_RS12985 IPR032475 Protealysin, N-terminal propeptide RD05_RS12985 IPR013856 Peptidase M4 domain RD05_RS12990 IPR032808 DoxX family RD05_RS13010 IPR036249 Thioredoxin-like superfamily RD05_RS13010 IPR013766 Thioredoxin domain RD05_RS13010 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS13010 IPR024706 Peroxiredoxin, AhpC-type RD05_RS13015 IPR036249 Thioredoxin-like superfamily RD05_RS13015 IPR006660 Arsenate reductase-like RD05_RS13015 IPR006659 Arsenate reductase RD05_RS13020 IPR023606 CoA-transferase family III domain superfamily RD05_RS13020 IPR003673 CoA-transferase family III RD05_RS13025 IPR013026 Tetratricopeptide repeat-containing domain RD05_RS13025 IPR011990 Tetratricopeptide-like helical domain superfamily RD05_RS13025 IPR019734 Tetratricopeptide repeat RD05_RS13040 IPR029759 Glutathione peroxidase active site RD05_RS13040 IPR029760 Glutathione peroxidase conserved site RD05_RS13040 IPR000889 Glutathione peroxidase RD05_RS13040 IPR036249 Thioredoxin-like superfamily RD05_RS13045 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS13045 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RD05_RS13045 IPR004045 Glutathione S-transferase, N-terminal RD05_RS13045 IPR004046 Glutathione S-transferase, C-terminal RD05_RS13045 IPR036249 Thioredoxin-like superfamily RD05_RS13060 IPR004562 Lipoyltransferase/lipoate-protein ligase RD05_RS13060 IPR019491 Lipoate protein ligase, C-terminal RD05_RS13060 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RD05_RS13075 IPR003817 Phosphatidylserine decarboxylase-related RD05_RS13075 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 RD05_RS13075 IPR033177 Phosphatidylserine decarboxylase RD05_RS13080 IPR013785 Aldolase-type TIM barrel RD05_RS13080 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD05_RS13080 IPR037396 FMN hydroxy acid dehydrogenase domain RD05_RS13080 IPR000262 FMN-dependent dehydrogenase RD05_RS13080 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD05_RS13085 IPR004872 Lipoprotein NlpA family RD05_RS13090 IPR014914 RES domain RD05_RS13100 IPR006696 Protein of unknown function DUF423 RD05_RS13120 IPR028082 Periplasmic binding protein-like I RD05_RS13120 IPR000709 Leu/Ile/Val-binding protein RD05_RS13120 IPR028081 Leucine-binding protein domain RD05_RS13125 IPR003593 AAA+ ATPase domain RD05_RS13125 IPR003439 ABC transporter-like RD05_RS13125 IPR017871 ABC transporter, conserved site RD05_RS13125 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS13125 IPR040582 MalK, OB fold domain RD05_RS13125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13125 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC RD05_RS13130 IPR035906 MetI-like superfamily RD05_RS13130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS13130 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE RD05_RS13135 IPR035906 MetI-like superfamily RD05_RS13135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS13140 IPR006061 Solute-binding family 1, conserved site RD05_RS13140 IPR006059 Bacterial extracellular solute-binding protein RD05_RS13145 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RD05_RS13145 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RD05_RS13145 IPR036291 NAD(P)-binding domain superfamily RD05_RS13145 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS13145 IPR000304 Pyrroline-5-carboxylate reductase RD05_RS13150 IPR003744 Queuosine precursor transporter RD05_RS13160 IPR000709 Leu/Ile/Val-binding protein RD05_RS13160 IPR028081 Leucine-binding protein domain RD05_RS13160 IPR028082 Periplasmic binding protein-like I RD05_RS13165 IPR001851 ABC transporter, permease RD05_RS13170 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RD05_RS13170 IPR001851 ABC transporter, permease RD05_RS13175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13175 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS13175 IPR017871 ABC transporter, conserved site RD05_RS13175 IPR003439 ABC transporter-like RD05_RS13175 IPR003593 AAA+ ATPase domain RD05_RS13180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13180 IPR003593 AAA+ ATPase domain RD05_RS13180 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS13180 IPR003439 ABC transporter-like RD05_RS13180 IPR017871 ABC transporter, conserved site RD05_RS13185 IPR015942 Asp/Glu/hydantoin racemase RD05_RS13185 IPR033134 Asp/Glu racemase, active site 2 RD05_RS13185 IPR001920 Asp/Glu racemase RD05_RS13185 IPR018187 Asp/Glu racemase, active site 1 RD05_RS13185 IPR004391 Glutamate racemase RD05_RS13200 IPR000620 EamA domain RD05_RS13210 IPR007349 Domain of unknown function DUF418 RD05_RS13215 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RD05_RS13215 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RD05_RS13215 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RD05_RS13215 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily RD05_RS13215 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RD05_RS13215 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RD05_RS13225 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS13225 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal RD05_RS13225 IPR006171 TOPRIM domain RD05_RS13225 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RD05_RS13225 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RD05_RS13225 IPR001241 DNA topoisomerase, type IIA RD05_RS13225 IPR018522 DNA topoisomerase, type IIA, conserved site RD05_RS13225 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS13225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS13225 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS13225 IPR002288 DNA gyrase B subunit, C-terminal RD05_RS13225 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RD05_RS13230 IPR017937 Thioredoxin, conserved site RD05_RS13230 IPR005746 Thioredoxin RD05_RS13230 IPR036249 Thioredoxin-like superfamily RD05_RS13230 IPR013766 Thioredoxin domain RD05_RS13235 IPR011129 Cold shock domain RD05_RS13235 IPR012340 Nucleic acid-binding, OB-fold RD05_RS13235 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS13235 IPR003593 AAA+ ATPase domain RD05_RS13235 IPR011112 Rho termination factor, N-terminal RD05_RS13235 IPR041703 Transcription termination factor Rho, ATP binding domain RD05_RS13235 IPR011113 Rho termination factor, RNA-binding domain RD05_RS13235 IPR004665 Transcription termination factor Rho RD05_RS13235 IPR036269 Rho termination factor, N-terminal domain superfamily RD05_RS13235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13245 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme RD05_RS13245 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RD05_RS13245 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain RD05_RS13250 IPR003828 Epoxyqueuosine reductase QueH RD05_RS13255 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form RD05_RS13255 IPR005131 Serine dehydratase beta chain RD05_RS13255 IPR029009 Allosteric substrate binding domain superfamily RD05_RS13255 IPR005130 Serine dehydratase-like, alpha subunit RD05_RS13260 IPR003841 Sodium-dependent phosphate transport protein RD05_RS13260 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein RD05_RS13265 IPR002925 Dienelactone hydrolase RD05_RS13265 IPR029058 Alpha/Beta hydrolase fold RD05_RS13275 IPR020045 DNA polymerase I-like, H3TH domain RD05_RS13275 IPR002562 3'-5' exonuclease domain RD05_RS13275 IPR001098 DNA-directed DNA polymerase, family A, palm domain RD05_RS13275 IPR002421 5'-3' exonuclease, N-terminal RD05_RS13275 IPR036279 5'-3' exonuclease, C-terminal domain superfamily RD05_RS13275 IPR019760 DNA-directed DNA polymerase, family A, conserved site RD05_RS13275 IPR036397 Ribonuclease H superfamily RD05_RS13275 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RD05_RS13275 IPR029060 PIN-like domain superfamily RD05_RS13275 IPR008918 Helix-hairpin-helix motif, class 2 RD05_RS13275 IPR002298 DNA polymerase A RD05_RS13275 IPR018320 DNA polymerase 1 RD05_RS13275 IPR012337 Ribonuclease H-like superfamily RD05_RS13280 IPR031100 LOG family RD05_RS13280 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RD05_RS13295 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS13295 IPR000795 Transcription factor, GTP-binding domain RD05_RS13295 IPR005225 Small GTP-binding protein domain RD05_RS13295 IPR035651 BipA, domain V RD05_RS13295 IPR042116 GTP-binding protein TypA/BipA, C-terminal RD05_RS13295 IPR035647 EF-G domain III/V-like RD05_RS13295 IPR031157 Tr-type G domain, conserved site RD05_RS13295 IPR000640 Elongation factor EFG, domain V-like RD05_RS13295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13295 IPR006298 GTP-binding protein TypA RD05_RS13295 IPR004161 Translation elongation factor EFTu-like, domain 2 RD05_RS13300 IPR002501 Pseudouridine synthase II, N-terminal RD05_RS13300 IPR020103 Pseudouridine synthase, catalytic domain superfamily RD05_RS13300 IPR032819 tRNA pseudouridylate synthase B, C-terminal RD05_RS13300 IPR014780 tRNA pseudouridine synthase II, TruB RD05_RS13305 IPR015946 K homology domain-like, alpha/beta RD05_RS13305 IPR023799 Ribosome-binding factor A domain superfamily RD05_RS13305 IPR000238 Ribosome-binding factor A RD05_RS13310 IPR023115 Translation initiation factor IF- 2, domain 3 RD05_RS13310 IPR036925 Translation initiation factor IF-2, domain 3 superfamily RD05_RS13310 IPR013575 Initiation factor 2 associated domain, bacterial RD05_RS13310 IPR006847 Translation initiation factor IF-2, N-terminal RD05_RS13310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13310 IPR009061 Putative DNA-binding domain superfamily RD05_RS13310 IPR005225 Small GTP-binding protein domain RD05_RS13310 IPR000795 Transcription factor, GTP-binding domain RD05_RS13310 IPR015760 Translation initiation factor IF- 2 RD05_RS13310 IPR000178 Translation initiation factor aIF-2, bacterial-like RD05_RS13310 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS13315 IPR010213 Transcription termination factor NusA RD05_RS13315 IPR010214 Transcription termination factor NusA, C-terminal duplication RD05_RS13315 IPR013735 Transcription factor NusA, N-terminal RD05_RS13315 IPR003029 S1 domain RD05_RS13315 IPR022967 RNA-binding domain, S1 RD05_RS13315 IPR030842 Transcription termination/antitermination protein NusA, bacterial RD05_RS13315 IPR012340 Nucleic acid-binding, OB-fold RD05_RS13315 IPR009019 K homology domain superfamily, prokaryotic type RD05_RS13315 IPR015946 K homology domain-like, alpha/beta RD05_RS13315 IPR004087 K Homology domain RD05_RS13315 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RD05_RS13315 IPR036555 NusA, N-terminal domain superfamily RD05_RS13315 IPR025249 KH domain, NusA-like RD05_RS13320 IPR028989 Ribosome maturation factor RimP, N-terminal RD05_RS13320 IPR035956 RimP, N-terminal domain superfamily RD05_RS13320 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily RD05_RS13320 IPR028998 Ribosome maturation factor RimP, C-terminal RD05_RS13320 IPR003728 Ribosome maturation factor RimP RD05_RS13325 IPR020103 Pseudouridine synthase, catalytic domain superfamily RD05_RS13325 IPR036986 RNA-binding S4 domain superfamily RD05_RS13325 IPR002942 RNA-binding S4 domain RD05_RS13325 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RD05_RS13325 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RD05_RS13325 IPR006145 Pseudouridine synthase, RsuA/RluA RD05_RS13330 IPR005234 Chromosome segregation/condensation protein ScpB RD05_RS13330 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13330 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS13340 IPR000847 Transcription regulator HTH, LysR RD05_RS13340 IPR005119 LysR, substrate-binding RD05_RS13340 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13340 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS13345 IPR000415 Nitroreductase-like RD05_RS13345 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE RD05_RS13345 IPR029479 Nitroreductase RD05_RS13350 IPR036627 CobW-like, C-terminal domain superfamily RD05_RS13350 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RD05_RS13350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13350 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RD05_RS13370 IPR004046 Glutathione S-transferase, C-terminal RD05_RS13370 IPR036249 Thioredoxin-like superfamily RD05_RS13370 IPR034333 Glutathione S-transferases, class Zeta , N-terminal RD05_RS13370 IPR034330 Glutathione S-transferases, class Zeta , C-terminal RD05_RS13370 IPR005955 Glutathione S-transferases, class Zeta RD05_RS13370 IPR004045 Glutathione S-transferase, N-terminal RD05_RS13370 IPR040079 Glutathione Transferase family RD05_RS13370 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS13370 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RD05_RS13375 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RD05_RS13380 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RD05_RS13385 IPR025657 RadC-like JAB domain RD05_RS13385 IPR010994 RuvA domain 2-like RD05_RS13385 IPR001405 Uncharacterised protein family UPF0758 RD05_RS13385 IPR037518 MPN domain RD05_RS13390 IPR017484 Kynurenine formamidase, bacteria RD05_RS13390 IPR007325 Kynurenine formamidase/cyclase-like RD05_RS13390 IPR037175 Kynurenine formamidase superfamily RD05_RS13395 IPR004981 Tryptophan 2,3-dioxygenase RD05_RS13395 IPR017485 Tryptophan 2,3-dioxygenase, bacterial RD05_RS13395 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like RD05_RS13400 IPR027493 Ribosomal protein L31 type B RD05_RS13400 IPR034704 L28p-like RD05_RS13400 IPR002150 Ribosomal protein L31 RD05_RS13400 IPR042105 Ribosomal protein L31 superfamily RD05_RS13410 IPR002528 Multi antimicrobial extrusion protein RD05_RS13425 IPR004504 DNA repair protein RadA RD05_RS13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13425 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain RD05_RS13425 IPR003593 AAA+ ATPase domain RD05_RS13425 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS13425 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS13425 IPR041166 LapB, rubredoxin metal binding domain RD05_RS13430 IPR036465 von Willebrand factor A-like domain superfamily RD05_RS13430 IPR002035 von Willebrand factor, type A RD05_RS13430 IPR022156 Uncharacterised protein YfbK, N-terminal RD05_RS13430 IPR021908 Protein of unknown function DUF3520 RD05_RS13435 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD05_RS13435 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13435 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS13435 IPR014284 RNA polymerase sigma-70 like domain RD05_RS13435 IPR039425 RNA polymerase sigma-70 like RD05_RS13435 IPR007630 RNA polymerase sigma-70 region 4 RD05_RS13435 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS13435 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS13450 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS13450 IPR036291 NAD(P)-binding domain superfamily RD05_RS13450 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS13450 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS13455 IPR011079 Alanine racemase, C-terminal RD05_RS13455 IPR000821 Alanine racemase RD05_RS13455 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD05_RS13455 IPR001608 Alanine racemase, N-terminal RD05_RS13455 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RD05_RS13455 IPR029066 PLP-binding barrel RD05_RS13460 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head RD05_RS13460 IPR008949 Isoprenoid synthase domain superfamily RD05_RS13460 IPR017827 Hydroxysqualene synthase HpnC RD05_RS13465 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head RD05_RS13465 IPR019845 Squalene/phytoene synthase, conserved site RD05_RS13465 IPR008949 Isoprenoid synthase domain superfamily RD05_RS13470 IPR014103 Zeta-carotene desaturase RD05_RS13470 IPR002937 Amine oxidase RD05_RS13470 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS13470 IPR014103 Zeta-carotene desaturase RD05_RS13470 IPR002937 Amine oxidase RD05_RS13470 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS13475 IPR003691 Putative fluoride ion transporter CrcB RD05_RS13485 IPR005981 ABC-2 type transporter, NodJ RD05_RS13485 IPR000412 ABC-2 transporter RD05_RS13485 IPR013525 ABC-2 type transporter RD05_RS13490 IPR003593 AAA+ ATPase domain RD05_RS13490 IPR017871 ABC transporter, conserved site RD05_RS13490 IPR015851 ABC transporter, NodI RD05_RS13490 IPR005978 Nodulation ABC transporter, NodI RD05_RS13490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13490 IPR003439 ABC transporter-like RD05_RS13510 IPR024932 Flavin transferase ApbE RD05_RS13510 IPR003374 ApbE-like superfamily RD05_RS13510 IPR042159 Flavin-trafficking protein ApbE RD05_RS13515 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS13515 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS13515 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS13515 IPR029039 Flavoprotein-like superfamily RD05_RS13515 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS13515 IPR008254 Flavodoxin/nitric oxide synthase RD05_RS13515 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily RD05_RS13515 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding RD05_RS13515 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS13515 IPR001094 Flavodoxin-like RD05_RS13525 IPR013108 Amidohydrolase 3 RD05_RS13525 IPR032466 Metal-dependent hydrolase RD05_RS13525 IPR023100 D-aminoacylase, insert domain superfamily RD05_RS13525 IPR011059 Metal-dependent hydrolase, composite domain superfamily RD05_RS13530 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS13530 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13530 IPR005119 LysR, substrate-binding RD05_RS13530 IPR000847 Transcription regulator HTH, LysR RD05_RS13540 IPR009215 TIM-barrel domain, IGPS-like RD05_RS13540 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS13540 IPR013785 Aldolase-type TIM barrel RD05_RS13545 IPR008322 Uncharacterised protein family UPF0261 RD05_RS13555 IPR003991 Pertactin virulence factor family RD05_RS13555 IPR036709 Autotransporter beta-domain superfamily RD05_RS13555 IPR006315 Outer membrane autotransporter barrel RD05_RS13555 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS13555 IPR004899 Pertactin, central region RD05_RS13555 IPR005546 Autotransporter beta-domain RD05_RS13555 IPR011050 Pectin lyase fold/virulence factor RD05_RS13555 IPR003992 Pertactin autotransporter RD05_RS13560 IPR003991 Pertactin virulence factor family RD05_RS13560 IPR005546 Autotransporter beta-domain RD05_RS13560 IPR004899 Pertactin, central region RD05_RS13560 IPR003992 Pertactin autotransporter RD05_RS13560 IPR011050 Pectin lyase fold/virulence factor RD05_RS13560 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS13560 IPR006315 Outer membrane autotransporter barrel RD05_RS13560 IPR036709 Autotransporter beta-domain superfamily RD05_RS13570 IPR003959 ATPase, AAA-type, core RD05_RS13570 IPR003593 AAA+ ATPase domain RD05_RS13570 IPR017730 Chaperonin ClpB RD05_RS13570 IPR018368 ClpA/B, conserved site 1 RD05_RS13570 IPR001270 ClpA/B family RD05_RS13570 IPR028299 ClpA/B, conserved site 2 RD05_RS13570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13570 IPR041546 ClpA/ClpB, AAA lid domain RD05_RS13570 IPR036628 Clp, N-terminal domain superfamily RD05_RS13570 IPR019489 Clp ATPase, C-terminal RD05_RS13570 IPR004176 Clp, N-terminal RD05_RS13575 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS13575 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13575 IPR018335 Transcription regulator HTH, Crp-type, conserved site RD05_RS13575 IPR014710 RmlC-like jelly roll fold RD05_RS13575 IPR012318 Crp-type HTH domain RD05_RS13575 IPR000595 Cyclic nucleotide-binding domain RD05_RS13575 IPR018490 Cyclic nucleotide-binding-like RD05_RS13590 IPR000086 NUDIX hydrolase domain RD05_RS13590 IPR015797 NUDIX hydrolase-like domain superfamily RD05_RS13590 IPR020476 NUDIX hydrolase RD05_RS13590 IPR020084 NUDIX hydrolase, conserved site RD05_RS13595 IPR024530 Putative quorum-sensing-regulated virulence factor RD05_RS13605 IPR037401 SnoaL-like domain RD05_RS13605 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS13605 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS13605 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS13605 IPR014284 RNA polymerase sigma-70 like domain RD05_RS13605 IPR032710 NTF2-like domain superfamily RD05_RS13605 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13605 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS13610 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS13610 IPR004675 Alkylhydroperoxidase AhpD core RD05_RS13610 IPR029032 AhpD-like RD05_RS13640 IPR004839 Aminotransferase, class I/classII RD05_RS13640 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD05_RS13640 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS13640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS13640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS13645 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS13645 IPR018313 Solute-binding protein family 3, conserved site RD05_RS13650 IPR035906 MetI-like superfamily RD05_RS13650 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS13650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS13655 IPR035906 MetI-like superfamily RD05_RS13655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS13655 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS13660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13660 IPR003439 ABC transporter-like RD05_RS13660 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS13660 IPR003593 AAA+ ATPase domain RD05_RS13660 IPR017871 ABC transporter, conserved site RD05_RS13680 IPR016708 Aspartoacylase RD05_RS13680 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD05_RS13705 IPR042100 Bordetella uptake gene, domain 1 RD05_RS13705 IPR005064 Bordetella uptake gene RD05_RS13710 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS13710 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RD05_RS13710 IPR036291 NAD(P)-binding domain superfamily RD05_RS13710 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD05_RS13710 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS13710 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS13710 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD05_RS13710 IPR006398 2-hydroxy-3-oxopropionate reductase RD05_RS13715 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13715 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS13715 IPR000847 Transcription regulator HTH, LysR RD05_RS13715 IPR037424 Regulatory protein NocR, PBP2 domain RD05_RS13715 IPR005119 LysR, substrate-binding RD05_RS13725 IPR040921 LD-carboxypeptidase, C-terminal RD05_RS13725 IPR003507 Peptidase family S66 RD05_RS13725 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily RD05_RS13725 IPR040449 LD-carboxypeptidase, N-terminal RD05_RS13725 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal RD05_RS13725 IPR029062 Class I glutamine amidotransferase-like RD05_RS13740 IPR011701 Major facilitator superfamily RD05_RS13740 IPR020846 Major facilitator superfamily domain RD05_RS13740 IPR036259 MFS transporter superfamily RD05_RS13745 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS13745 IPR036291 NAD(P)-binding domain superfamily RD05_RS13745 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS13745 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS13750 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13750 IPR000847 Transcription regulator HTH, LysR RD05_RS13750 IPR005119 LysR, substrate-binding RD05_RS13750 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS13755 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RD05_RS13755 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RD05_RS13755 IPR033978 L-talarate/galactarate dehydratase RD05_RS13755 IPR029065 Enolase C-terminal domain-like RD05_RS13755 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RD05_RS13755 IPR036849 Enolase-like, C-terminal domain superfamily RD05_RS13755 IPR029017 Enolase-like, N-terminal RD05_RS13760 IPR042100 Bordetella uptake gene, domain 1 RD05_RS13760 IPR005064 Bordetella uptake gene RD05_RS13780 IPR003719 Phenazine biosynthesis PhzF protein RD05_RS13790 IPR004923 Iron permease FTR1/Fip1/EfeU RD05_RS13800 IPR038482 Periplasmic metal-binding protein tp34-type superfamily RD05_RS13800 IPR018470 Periplasmic metal-binding protein Tp34-type RD05_RS13805 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RD05_RS13805 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RD05_RS13805 IPR007897 PHB accumulation regulatory RD05_RS13810 IPR036291 NAD(P)-binding domain superfamily RD05_RS13810 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS13810 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS13810 IPR011283 Acetoacetyl-CoA reductase RD05_RS13815 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain RD05_RS13815 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I RD05_RS13815 IPR029058 Alpha/Beta hydrolase fold RD05_RS13820 IPR003730 Multi-copper polyphenol oxidoreductase RD05_RS13820 IPR038371 Multi-copper polyphenol oxidoreductase superfamily RD05_RS13820 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD05_RS13825 IPR036986 RNA-binding S4 domain superfamily RD05_RS13825 IPR020103 Pseudouridine synthase, catalytic domain superfamily RD05_RS13825 IPR006225 Pseudouridine synthase, RluC/RluD RD05_RS13825 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RD05_RS13825 IPR002942 RNA-binding S4 domain RD05_RS13825 IPR006145 Pseudouridine synthase, RsuA/RluA RD05_RS13830 IPR017689 Outer membrane protein assembly factor BamD RD05_RS13830 IPR011990 Tetratricopeptide-like helical domain superfamily RD05_RS13830 IPR039565 Outer membrane lipoprotein BamD-like RD05_RS13835 IPR006935 Helicase/UvrB, N-terminal RD05_RS13835 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type RD05_RS13835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13835 IPR006555 ATP-dependent helicase, C-terminal RD05_RS13835 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS13840 IPR041692 HHH domain 9 RD05_RS13840 IPR012340 Nucleic acid-binding, OB-fold RD05_RS13840 IPR012337 Ribonuclease H-like superfamily RD05_RS13840 IPR010994 RuvA domain 2-like RD05_RS13840 IPR006641 YqgF/RNase H-like domain RD05_RS13840 IPR003029 S1 domain RD05_RS13840 IPR023319 Tex-like protein, HTH domain superfamily RD05_RS13840 IPR018974 Tex-like protein, N-terminal RD05_RS13840 IPR032639 Tex protein, YqgF-like domain RD05_RS13840 IPR037027 YqgF/RNase H-like domain superfamily RD05_RS13840 IPR022967 RNA-binding domain, S1 RD05_RS13840 IPR023323 Tex-like domain superfamily RD05_RS13845 IPR002305 Aminoacyl-tRNA synthetase, class Ic RD05_RS13845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS13845 IPR002306 Tryptophan-tRNA ligase RD05_RS13845 IPR024109 Tryptophan-tRNA ligase, bacterial-type RD05_RS13845 IPR036913 YegP-like superfamily RD05_RS13860 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS13860 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS13860 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS13860 IPR036291 NAD(P)-binding domain superfamily RD05_RS13865 IPR005064 Bordetella uptake gene RD05_RS13865 IPR042100 Bordetella uptake gene, domain 1 RD05_RS13875 IPR000847 Transcription regulator HTH, LysR RD05_RS13875 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13875 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain RD05_RS13875 IPR005119 LysR, substrate-binding RD05_RS13875 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS13880 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS13880 IPR036291 NAD(P)-binding domain superfamily RD05_RS13880 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS13880 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS13885 IPR005654 ATPase, AFG1-like RD05_RS13885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13885 IPR030870 Cell division protein ZapE RD05_RS13890 IPR006258 Dihydrolipoamide dehydrogenase RD05_RS13890 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RD05_RS13890 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RD05_RS13890 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD05_RS13890 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS13890 IPR023753 FAD/NAD(P)-binding domain RD05_RS13890 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS13895 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS13895 IPR011053 Single hybrid motif RD05_RS13895 IPR006255 Dihydrolipoamide succinyltransferase RD05_RS13895 IPR004167 Peripheral subunit-binding domain RD05_RS13895 IPR036625 E3-binding domain superfamily RD05_RS13895 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD05_RS13895 IPR000089 Biotin/lipoyl attachment RD05_RS13895 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RD05_RS13900 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal RD05_RS13900 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily RD05_RS13900 IPR029061 Thiamin diphosphate-binding fold RD05_RS13900 IPR005475 Transketolase-like, pyrimidine-binding domain RD05_RS13900 IPR001017 Dehydrogenase, E1 component RD05_RS13900 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain RD05_RS13900 IPR011603 2-oxoglutarate dehydrogenase E1 component RD05_RS13905 IPR004814 Oligopeptide transporter OPT RD05_RS13905 IPR004813 Oligopeptide transporter, OPT superfamily RD05_RS13910 IPR004813 Oligopeptide transporter, OPT superfamily RD05_RS13910 IPR004814 Oligopeptide transporter OPT RD05_RS13915 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RD05_RS13915 IPR000485 AsnC-type HTH domain RD05_RS13915 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS13915 IPR019888 Transcription regulator AsnC-type RD05_RS13915 IPR011008 Dimeric alpha-beta barrel RD05_RS13915 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS13915 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS13920 IPR029061 Thiamin diphosphate-binding fold RD05_RS13920 IPR041621 Pyruvate dehydrogenase E1 component, middle domain RD05_RS13920 IPR004660 Pyruvate dehydrogenase E1 component RD05_RS13920 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal RD05_RS13920 IPR005474 Transketolase, N-terminal RD05_RS13920 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RD05_RS13925 IPR012302 Malic enzyme, NAD-binding RD05_RS13925 IPR015884 Malic enzyme, conserved site RD05_RS13925 IPR012188 NAD(P)-dependent malic enzyme RD05_RS13925 IPR012301 Malic enzyme, N-terminal domain RD05_RS13925 IPR036291 NAD(P)-binding domain superfamily RD05_RS13925 IPR042113 Phosphate acetyltransferase, domain 1 RD05_RS13925 IPR042112 Phosphate acetyltransferase, domain 2 RD05_RS13925 IPR002505 Phosphate acetyl/butaryl transferase RD05_RS13925 IPR037062 Malic enzyme, N-terminal domain superfamily RD05_RS13930 IPR039458 FimA-like RD05_RS13930 IPR008966 Adhesion domain superfamily RD05_RS13930 IPR036937 Fimbrial-type adhesion domain superfamily RD05_RS13940 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RD05_RS13940 IPR006358 Transcription elongation factor GreB RD05_RS13940 IPR028624 Transcription elongation factor GreA/GreB RD05_RS13940 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily RD05_RS13940 IPR023459 Transcription elongation factor GreA/GreB family RD05_RS13940 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RD05_RS13940 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RD05_RS13940 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily RD05_RS13945 IPR016195 Polymerase/histidinol phosphatase-like RD05_RS13945 IPR004013 PHP domain RD05_RS13945 IPR003141 Polymerase/histidinol phosphatase, N-terminal RD05_RS13980 IPR018228 Deoxyribonuclease, TatD-related, conserved site RD05_RS13980 IPR015991 Uncharacterised hydrolase TatD-type RD05_RS13980 IPR032466 Metal-dependent hydrolase RD05_RS13980 IPR001130 TatD family RD05_RS13985 IPR003593 AAA+ ATPase domain RD05_RS13985 IPR003439 ABC transporter-like RD05_RS13985 IPR017871 ABC transporter, conserved site RD05_RS13985 IPR015854 ABC transporter, lipoprotein release, LolD RD05_RS13985 IPR011924 Lipoprotein releasing system, ATP-binding protein RD05_RS13985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13990 IPR025857 MacB-like periplasmic core domain RD05_RS13990 IPR003838 ABC transporter permease protein domain RD05_RS13990 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E RD05_RS14000 IPR038763 DHH phosphoesterase superfamily RD05_RS14000 IPR004610 Bacterial RecJ exonuclease RD05_RS14000 IPR003156 DHHA1 domain RD05_RS14000 IPR041122 RecJ, OB domain RD05_RS14000 IPR001667 DDH domain RD05_RS14005 IPR004374 Peptide chain release factor 2 RD05_RS14005 IPR000352 Peptide chain release factor class I RD05_RS14005 IPR005139 Peptide chain release factor RD05_RS14010 IPR036291 NAD(P)-binding domain superfamily RD05_RS14010 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS14010 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS14015 IPR002313 Lysine-tRNA ligase, class II RD05_RS14015 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RD05_RS14015 IPR006195 Aminoacyl-tRNA synthetase, class II RD05_RS14015 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD05_RS14015 IPR012340 Nucleic acid-binding, OB-fold RD05_RS14015 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RD05_RS14025 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS14025 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal RD05_RS14025 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RD05_RS14025 IPR009057 Homeobox-like domain superfamily RD05_RS14030 IPR000873 AMP-dependent synthetase/ligase RD05_RS14030 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS14030 IPR020845 AMP-binding, conserved site RD05_RS14035 IPR003593 AAA+ ATPase domain RD05_RS14035 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS14035 IPR017871 ABC transporter, conserved site RD05_RS14035 IPR003439 ABC transporter-like RD05_RS14035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14055 IPR017871 ABC transporter, conserved site RD05_RS14055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14055 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS14055 IPR003593 AAA+ ATPase domain RD05_RS14055 IPR003439 ABC transporter-like RD05_RS14065 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS14065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS14065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS14065 IPR036249 Thioredoxin-like superfamily RD05_RS14065 IPR011649 KaiB domain RD05_RS14065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS14065 IPR005467 Histidine kinase domain RD05_RS14065 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS14065 IPR023527 Adaptive-response sensory-kinase SasA RD05_RS14070 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS14070 IPR011006 CheY-like superfamily RD05_RS14070 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS14070 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS14070 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14075 IPR003846 Protein adenylyltransferase SelO RD05_RS14085 IPR023679 Uncharacterised protein family UPF0761, bacterial RD05_RS14085 IPR017039 Virulence factor BrkB RD05_RS14100 IPR018517 tRNA-dihydrouridine synthase, conserved site RD05_RS14100 IPR001269 tRNA-dihydrouridine synthase RD05_RS14100 IPR004653 tRNA-dihydrouridine(20/20a) synthase RD05_RS14100 IPR035587 DUS-like, FMN-binding domain RD05_RS14100 IPR013785 Aldolase-type TIM barrel RD05_RS14105 IPR002575 Aminoglycoside phosphotransferase RD05_RS14105 IPR005280 Homoserine kinase, type II RD05_RS14105 IPR011009 Protein kinase-like domain superfamily RD05_RS14125 IPR001890 RNA-binding, CRM domain RD05_RS14125 IPR017924 RNA-binding protein YhbY RD05_RS14125 IPR035920 YhbY-like superfamily RD05_RS14130 IPR015507 Ribosomal RNA large subunit methyltransferase E RD05_RS14130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS14130 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RD05_RS14135 IPR003960 ATPase, AAA-type, conserved site RD05_RS14135 IPR041569 AAA ATPase, AAA+ lid domain RD05_RS14135 IPR003959 ATPase, AAA-type, core RD05_RS14135 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14135 IPR011546 Peptidase M41, FtsH extracellular RD05_RS14135 IPR003593 AAA+ ATPase domain RD05_RS14135 IPR005936 Peptidase, FtsH RD05_RS14135 IPR000642 Peptidase M41 RD05_RS14135 IPR037219 Peptidase M41-like RD05_RS14140 IPR006390 Dihydropteroate synthase RD05_RS14140 IPR011005 Dihydropteroate synthase-like RD05_RS14140 IPR000489 Pterin-binding domain RD05_RS14145 IPR005841 Alpha-D-phosphohexomutase superfamily RD05_RS14145 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD05_RS14145 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD05_RS14145 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD05_RS14145 IPR016066 Alpha-D-phosphohexomutase, conserved site RD05_RS14145 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD05_RS14145 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD05_RS14145 IPR006352 Phosphoglucosamine mutase, bacterial type RD05_RS14145 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RD05_RS14155 IPR022371 Exopolyphosphatase RD05_RS14155 IPR003695 Ppx/GppA phosphatase RD05_RS14155 IPR030673 Pyrophosphatase, GppA/Ppx-type RD05_RS14160 IPR036832 Polyphosphate kinase N-terminal domain superfamily RD05_RS14160 IPR025198 Polyphosphate kinase N-terminal domain RD05_RS14160 IPR025200 Polyphosphate kinase C-terminal domain 2 RD05_RS14160 IPR041108 Polyphosphate kinase, C-terminal domain 1 RD05_RS14160 IPR024953 Polyphosphate kinase middle domain RD05_RS14160 IPR003414 Polyphosphate kinase RD05_RS14160 IPR036830 Polyphosphate kinase middle domain superfamily RD05_RS14165 IPR024370 PBP domain RD05_RS14165 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS RD05_RS14170 IPR011864 Phosphate ABC transporter, permease protein PstC RD05_RS14170 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS14170 IPR035906 MetI-like superfamily RD05_RS14175 IPR035906 MetI-like superfamily RD05_RS14175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS14175 IPR005672 Phosphate transport system permease protein PstA RD05_RS14180 IPR003593 AAA+ ATPase domain RD05_RS14180 IPR005670 Phosphate transport system permease protein 1 RD05_RS14180 IPR003439 ABC transporter-like RD05_RS14180 IPR017871 ABC transporter, conserved site RD05_RS14180 IPR015850 ABC transporter, phosphate import, PstB RD05_RS14180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14195 IPR000468 Barstar (barnase inhibitor) RD05_RS14195 IPR035905 Barstar-like superfamily RD05_RS14205 IPR012301 Malic enzyme, N-terminal domain RD05_RS14205 IPR002505 Phosphate acetyl/butaryl transferase RD05_RS14205 IPR042112 Phosphate acetyltransferase, domain 2 RD05_RS14205 IPR042113 Phosphate acetyltransferase, domain 1 RD05_RS14205 IPR036291 NAD(P)-binding domain superfamily RD05_RS14205 IPR012188 NAD(P)-dependent malic enzyme RD05_RS14205 IPR012302 Malic enzyme, NAD-binding RD05_RS14205 IPR037062 Malic enzyme, N-terminal domain superfamily RD05_RS14205 IPR015884 Malic enzyme, conserved site RD05_RS14215 IPR004839 Aminotransferase, class I/classII RD05_RS14215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS14215 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD05_RS14215 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS14220 IPR024570 Murein transglycosylase-C, N-terminal RD05_RS14220 IPR023346 Lysozyme-like domain superfamily RD05_RS14220 IPR000189 Prokaryotic transglycosylase, active site RD05_RS14220 IPR008258 Transglycosylase SLT domain 1 RD05_RS14220 IPR023664 Murein transglycosylase-C RD05_RS14225 IPR023677 UbiD decarboxylyase, bacteria RD05_RS14225 IPR002830 UbiD decarboxylyase family RD05_RS14250 IPR019478 Sirohaem synthase, dimerisation domain RD05_RS14250 IPR028281 Siroheme synthase, central domain RD05_RS14250 IPR012409 Sirohaem synthase RD05_RS14250 IPR006366 Uroporphyrin-III C-methyltransferase RD05_RS14250 IPR014776 Tetrapyrrole methylase, subdomain 2 RD05_RS14250 IPR014777 Tetrapyrrole methylase, subdomain 1 RD05_RS14250 IPR035996 Tetrapyrrole methylase superfamily RD05_RS14250 IPR000878 Tetrapyrrole methylase RD05_RS14250 IPR036291 NAD(P)-binding domain superfamily RD05_RS14250 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RD05_RS14250 IPR006367 Sirohaem synthase, N-terminal RD05_RS14255 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS14255 IPR036709 Autotransporter beta-domain superfamily RD05_RS14255 IPR005546 Autotransporter beta-domain RD05_RS14255 IPR011050 Pectin lyase fold/virulence factor RD05_RS14255 IPR003991 Pertactin virulence factor family RD05_RS14255 IPR003992 Pertactin autotransporter RD05_RS14255 IPR004899 Pertactin, central region RD05_RS14255 IPR006315 Outer membrane autotransporter barrel RD05_RS14265 IPR005546 Autotransporter beta-domain RD05_RS14265 IPR036709 Autotransporter beta-domain superfamily RD05_RS14265 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS14265 IPR011050 Pectin lyase fold/virulence factor RD05_RS14265 IPR003992 Pertactin autotransporter RD05_RS14265 IPR004899 Pertactin, central region RD05_RS14265 IPR003991 Pertactin virulence factor family RD05_RS14265 IPR006315 Outer membrane autotransporter barrel RD05_RS14275 IPR034332 Uracil phosphoribosyltransferase, bacterial-type RD05_RS14275 IPR005765 Uracil phosphoribosyl transferase RD05_RS14275 IPR029057 Phosphoribosyltransferase-like RD05_RS14275 IPR000836 Phosphoribosyltransferase domain RD05_RS14280 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C RD05_RS14280 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS14285 IPR042118 QueA, domain 1 RD05_RS14285 IPR042119 QueA, domain 2 RD05_RS14285 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily RD05_RS14285 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RD05_RS14290 IPR004803 tRNA-guanine transglycosylase RD05_RS14290 IPR036511 Queuine tRNA-ribosyltransferase-like RD05_RS14290 IPR002616 tRNA-guanine(15) transglycosylase-like RD05_RS14295 IPR003849 Preprotein translocase YajC RD05_RS14300 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD05_RS14300 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD05_RS14300 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD05_RS14300 IPR001036 Acriflavin resistance protein RD05_RS14300 IPR005791 Protein translocase subunit SecD RD05_RS14300 IPR027398 SecD export protein N-terminal TM domain RD05_RS14305 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD05_RS14305 IPR005665 Protein-export membrane protein SecF, bacterial RD05_RS14305 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD05_RS14305 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD05_RS14320 IPR007197 Radical SAM RD05_RS14320 IPR006638 Elp3/MiaB/NifB RD05_RS14320 IPR005839 Methylthiotransferase RD05_RS14320 IPR020612 Methylthiotransferase, conserved site RD05_RS14320 IPR038135 Methylthiotransferase, N-terminal domain superfamily RD05_RS14320 IPR013848 Methylthiotransferase, N-terminal RD05_RS14320 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB RD05_RS14320 IPR002792 TRAM domain RD05_RS14320 IPR023404 Radical SAM, alpha/beta horseshoe RD05_RS14325 IPR003714 PhoH-like protein RD05_RS14325 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14330 IPR023091 Metalloprotease catalytic domain superfamily, predicted RD05_RS14330 IPR002036 Endoribonuclease YbeY RD05_RS14330 IPR020549 Endoribonuclease YbeY, conserved site RD05_RS14335 IPR000644 CBS domain RD05_RS14335 IPR005170 Transporter-associated domain RD05_RS14335 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS14335 IPR016169 FAD-binding, type PCMH, subdomain 2 RD05_RS14340 IPR004563 Apolipoprotein N-acyltransferase RD05_RS14340 IPR003010 Carbon-nitrogen hydrolase RD05_RS14340 IPR036526 Carbon-nitrogen hydrolase superfamily RD05_RS14345 IPR036812 NADP-dependent oxidoreductase domain superfamily RD05_RS14345 IPR023210 NADP-dependent oxidoreductase domain RD05_RS14345 IPR020471 Aldo/keto reductase RD05_RS14370 IPR007439 Chemotaxis phosphatase, CheZ RD05_RS14375 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14375 IPR011006 CheY-like superfamily RD05_RS14380 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type RD05_RS14380 IPR035909 Methylesterase CheB, C-terminal RD05_RS14380 IPR011006 CheY-like superfamily RD05_RS14380 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RD05_RS14380 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS14390 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding RD05_RS14390 IPR003660 HAMP domain RD05_RS14390 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily RD05_RS14390 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS14390 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site RD05_RS14395 IPR039315 Chemotaxis protein CheW RD05_RS14395 IPR036061 CheW-like domain superfamily RD05_RS14395 IPR002545 CheW-like domain RD05_RS14400 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS14400 IPR004105 Histidine kinase CheA-like, homodimeric domain RD05_RS14400 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily RD05_RS14400 IPR036061 CheW-like domain superfamily RD05_RS14400 IPR002545 CheW-like domain RD05_RS14400 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RD05_RS14400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS14400 IPR036641 HPT domain superfamily RD05_RS14400 IPR005467 Histidine kinase domain RD05_RS14400 IPR015162 CheY binding RD05_RS14400 IPR035891 CheY-binding domain of CheA RD05_RS14400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS14400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS14405 IPR011006 CheY-like superfamily RD05_RS14405 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14410 IPR036737 OmpA-like domain superfamily RD05_RS14410 IPR006665 OmpA-like domain RD05_RS14410 IPR025713 Motility protein B, N-terminal domain RD05_RS14415 IPR002898 MotA/TolQ/ExbB proton channel RD05_RS14415 IPR022522 Flagellar motor stator, MotA RD05_RS14415 IPR000540 Flagellar motor protein MotA, conserved site RD05_RS14420 IPR007944 Flagellar transcriptional activator FlhC RD05_RS14425 IPR023559 Flagellar transcriptional activator FlhD RD05_RS14425 IPR036194 Flagellar transcriptional activator FlhD superfamily RD05_RS14430 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS14430 IPR007624 RNA polymerase sigma-70 region 3 RD05_RS14430 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS14430 IPR012845 RNA polymerase sigma factor, FliA/WhiG RD05_RS14430 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS14430 IPR007630 RNA polymerase sigma-70 region 4 RD05_RS14430 IPR028617 RNA polymerase sigma factor FliA RD05_RS14430 IPR014284 RNA polymerase sigma-70 like domain RD05_RS14430 IPR000943 RNA polymerase sigma-70 RD05_RS14440 IPR022967 RNA-binding domain, S1 RD05_RS14440 IPR004368 Translation initiation factor IF-1 RD05_RS14440 IPR012340 Nucleic acid-binding, OB-fold RD05_RS14440 IPR006196 RNA-binding domain, S1, IF1 type RD05_RS14450 IPR018392 LysM domain RD05_RS14450 IPR013731 Opacity-associated protein A, N-terminal RD05_RS14450 IPR011055 Duplicated hybrid motif RD05_RS14450 IPR016047 Peptidase M23 RD05_RS14460 IPR036425 MoaB/Mog-like domain superfamily RD05_RS14460 IPR001453 MoaB/Mog domain RD05_RS14460 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD05_RS14470 IPR004471 Branched-chain amino acid transport, AzlC RD05_RS14470 IPR011606 Branched-chain amino acid transport, permease RD05_RS14480 IPR001623 DnaJ domain RD05_RS14480 IPR036869 Chaperone J-domain superfamily RD05_RS14480 IPR002939 Chaperone DnaJ, C-terminal RD05_RS14480 IPR023859 DNA-binding protein, curved-DNA RD05_RS14480 IPR008971 HSP40/DnaJ peptide-binding RD05_RS14480 IPR018253 DnaJ domain, conserved site RD05_RS14500 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal RD05_RS14500 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS14500 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RD05_RS14500 IPR040079 Glutathione Transferase family RD05_RS14500 IPR004045 Glutathione S-transferase, N-terminal RD05_RS14500 IPR036249 Thioredoxin-like superfamily RD05_RS14505 IPR029058 Alpha/Beta hydrolase fold RD05_RS14505 IPR024501 Protein of unknown function DUF3141 RD05_RS14510 IPR012147 Phosphate acetyl/butyryltransferase RD05_RS14510 IPR002505 Phosphate acetyl/butaryl transferase RD05_RS14515 IPR000890 Aliphatic acid kinase, short-chain RD05_RS14515 IPR023865 Aliphatic acid kinase, short-chain, conserved site RD05_RS14515 IPR004372 Acetate/propionate kinase RD05_RS14520 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RD05_RS14520 IPR036291 NAD(P)-binding domain superfamily RD05_RS14520 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS14525 IPR001576 Phosphoglycerate kinase RD05_RS14525 IPR015911 Phosphoglycerate kinase, conserved site RD05_RS14525 IPR015824 Phosphoglycerate kinase, N-terminal RD05_RS14525 IPR036043 Phosphoglycerate kinase superfamily RD05_RS14530 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RD05_RS14530 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RD05_RS14530 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RD05_RS14530 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RD05_RS14530 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RD05_RS14530 IPR036291 NAD(P)-binding domain superfamily RD05_RS14535 IPR033248 Transketolase, C-terminal domain RD05_RS14535 IPR029061 Thiamin diphosphate-binding fold RD05_RS14535 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RD05_RS14535 IPR005475 Transketolase-like, pyrimidine-binding domain RD05_RS14535 IPR005478 Transketolase, bacterial-like RD05_RS14535 IPR020826 Transketolase binding site RD05_RS14535 IPR033247 Transketolase family RD05_RS14535 IPR005474 Transketolase, N-terminal RD05_RS14540 IPR006700 Ribosomal RNA small subunit methyltransferase E RD05_RS14540 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS14540 IPR015947 PUA-like superfamily RD05_RS14540 IPR029028 Alpha/beta knot methyltransferases RD05_RS14555 IPR001492 Flagellin RD05_RS14555 IPR001029 Flagellin, D0/D1 domain RD05_RS14555 IPR042187 Flagellin, C-terminal domain, subdomain 2 RD05_RS14560 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD05_RS14560 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS14560 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RD05_RS14560 IPR006258 Dihydrolipoamide dehydrogenase RD05_RS14560 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RD05_RS14560 IPR023753 FAD/NAD(P)-binding domain RD05_RS14560 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS14565 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS14565 IPR011053 Single hybrid motif RD05_RS14565 IPR004167 Peripheral subunit-binding domain RD05_RS14565 IPR036625 E3-binding domain superfamily RD05_RS14565 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RD05_RS14565 IPR000089 Biotin/lipoyl attachment RD05_RS14565 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex RD05_RS14565 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD05_RS14570 IPR004660 Pyruvate dehydrogenase E1 component RD05_RS14570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RD05_RS14570 IPR005474 Transketolase, N-terminal RD05_RS14570 IPR029061 Thiamin diphosphate-binding fold RD05_RS14570 IPR041621 Pyruvate dehydrogenase E1 component, middle domain RD05_RS14570 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal RD05_RS14575 IPR000700 PAS-associated, C-terminal RD05_RS14575 IPR035965 PAS domain superfamily RD05_RS14575 IPR001610 PAC motif RD05_RS14575 IPR000014 PAS domain RD05_RS14575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS14575 IPR013767 PAS fold RD05_RS14575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS14575 IPR005467 Histidine kinase domain RD05_RS14575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS14575 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS14575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS14580 IPR011006 CheY-like superfamily RD05_RS14580 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS14580 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14580 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS14580 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS14585 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD05_RS14585 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RD05_RS14585 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD05_RS14585 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RD05_RS14585 IPR036291 NAD(P)-binding domain superfamily RD05_RS14590 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RD05_RS14590 IPR001567 Peptidase M3A/M3B catalytic domain RD05_RS14595 IPR036249 Thioredoxin-like superfamily RD05_RS14595 IPR003782 Copper chaperone SCO1/SenC RD05_RS14605 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD05_RS14605 IPR003423 Outer membrane efflux protein RD05_RS14610 IPR001036 Acriflavin resistance protein RD05_RS14610 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RD05_RS14610 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS14615 IPR006143 RND efflux pump, membrane fusion protein RD05_RS14615 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RD05_RS14620 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS14620 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS14620 IPR005119 LysR, substrate-binding RD05_RS14620 IPR000847 Transcription regulator HTH, LysR RD05_RS14625 IPR036986 RNA-binding S4 domain superfamily RD05_RS14625 IPR002942 RNA-binding S4 domain RD05_RS14625 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RD05_RS14625 IPR006145 Pseudouridine synthase, RsuA/RluA RD05_RS14625 IPR020103 Pseudouridine synthase, catalytic domain superfamily RD05_RS14625 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain RD05_RS14625 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RD05_RS14630 IPR007440 Chorismate--pyruvate lyase RD05_RS14630 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RD05_RS14635 IPR036259 MFS transporter superfamily RD05_RS14635 IPR020846 Major facilitator superfamily domain RD05_RS14635 IPR011701 Major facilitator superfamily RD05_RS14645 IPR036812 NADP-dependent oxidoreductase domain superfamily RD05_RS14645 IPR023210 NADP-dependent oxidoreductase domain RD05_RS14645 IPR020471 Aldo/keto reductase RD05_RS14655 IPR000086 NUDIX hydrolase domain RD05_RS14655 IPR015797 NUDIX hydrolase-like domain superfamily RD05_RS14655 IPR000059 NUDIX hydrolase, NudL, conserved site RD05_RS14655 IPR023735 Uncharacterised nudix hydrolase NudL RD05_RS14660 IPR008991 Translation protein SH3-like domain superfamily RD05_RS14660 IPR018257 Ribosomal protein L19, conserved site RD05_RS14660 IPR001857 Ribosomal protein L19 RD05_RS14660 IPR038657 Ribosomal protein L19 superfamily RD05_RS14675 IPR013785 Aldolase-type TIM barrel RD05_RS14675 IPR040086 Protein MJ0683-like RD05_RS14675 IPR007197 Radical SAM RD05_RS14675 IPR006638 Elp3/MiaB/NifB RD05_RS14685 IPR002500 Phosphoadenosine phosphosulphate reductase RD05_RS14685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS14685 IPR011784 Sulphate adenylyltransferase, small subunit RD05_RS14690 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase RD05_RS14690 IPR002500 Phosphoadenosine phosphosulphate reductase RD05_RS14690 IPR011798 Adenosine 5'-phosphosulphate reductase RD05_RS14690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS14695 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS14695 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal RD05_RS14695 IPR003439 ABC transporter-like RD05_RS14695 IPR041193 CysA, C-terminal regulatory domain RD05_RS14695 IPR024765 TOBE-like domain RD05_RS14695 IPR005666 Sulphate transport system permease protein 1 RD05_RS14695 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14695 IPR017871 ABC transporter, conserved site RD05_RS14695 IPR003593 AAA+ ATPase domain RD05_RS14700 IPR005667 Sulphate ABC transporter permease protein 2 RD05_RS14700 IPR035906 MetI-like superfamily RD05_RS14700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS14700 IPR011866 Sulphate ABC transporter, permease protein CysW RD05_RS14705 IPR011865 Sulphate ABC transporter, permease protein CysT RD05_RS14705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS14705 IPR035906 MetI-like superfamily RD05_RS14705 IPR005667 Sulphate ABC transporter permease protein 2 RD05_RS14715 IPR005669 Thiosulphate/Sulfate-binding protein RD05_RS14715 IPR000957 Sulphate/thiosulphate-binding, conserved site RD05_RS14715 IPR034408 Sulphate/thiosulphate-binding site RD05_RS14720 IPR022915 Peroxiredoxin, TDXH subfamily RD05_RS14720 IPR024706 Peroxiredoxin, AhpC-type RD05_RS14720 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS14720 IPR036249 Thioredoxin-like superfamily RD05_RS14720 IPR013766 Thioredoxin domain RD05_RS14720 IPR019479 Peroxiredoxin, C-terminal RD05_RS14725 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS14725 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS14725 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS14725 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS14725 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS14725 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS14725 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RD05_RS14730 IPR001308 Electron transfer flavoprotein alpha subunit/FixB RD05_RS14730 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal RD05_RS14730 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RD05_RS14730 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RD05_RS14730 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS14730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS14730 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RD05_RS14735 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RD05_RS14735 IPR012255 Electron transfer flavoprotein, beta subunit RD05_RS14735 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal RD05_RS14735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS14735 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site RD05_RS14740 IPR000286 Histone deacetylase family RD05_RS14740 IPR023801 Histone deacetylase domain RD05_RS14740 IPR037138 Histone deacetylase domain superfamily RD05_RS14740 IPR023696 Ureohydrolase domain superfamily RD05_RS14745 IPR023346 Lysozyme-like domain superfamily RD05_RS14745 IPR031304 Transglycosylase SLT domain 2 RD05_RS14745 IPR011757 Lytic transglycosylase MltB RD05_RS14750 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS14750 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RD05_RS14750 IPR005858 Cysteine synthase CysM RD05_RS14750 IPR005856 Cysteine synthase RD05_RS14750 IPR001926 Pyridoxal-phosphate dependent enzyme RD05_RS14760 IPR019554 Soluble ligand binding domain RD05_RS14760 IPR004509 Competence protein ComEA, helix-hairpin-helix domain RD05_RS14760 IPR004787 Competence protein ComEA RD05_RS14760 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD05_RS14760 IPR010994 RuvA domain 2-like RD05_RS14765 IPR001509 NAD-dependent epimerase/dehydratase RD05_RS14765 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase RD05_RS14765 IPR036291 NAD(P)-binding domain superfamily RD05_RS14770 IPR011611 Carbohydrate kinase PfkB RD05_RS14770 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RD05_RS14770 IPR029056 Ribokinase-like RD05_RS14770 IPR011913 RfaE bifunctional protein, domain I RD05_RS14775 IPR011990 Tetratricopeptide-like helical domain superfamily RD05_RS14775 IPR041166 LapB, rubredoxin metal binding domain RD05_RS14775 IPR019734 Tetratricopeptide repeat RD05_RS14775 IPR030865 Lipopolysaccharide assembly protein B RD05_RS14775 IPR013026 Tetratricopeptide repeat-containing domain RD05_RS14785 IPR000119 Histone-like DNA-binding protein RD05_RS14785 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RD05_RS14785 IPR005685 Integration host factor, beta subunit RD05_RS14790 IPR022967 RNA-binding domain, S1 RD05_RS14790 IPR003029 S1 domain RD05_RS14790 IPR000110 Ribosomal protein S1 RD05_RS14790 IPR012340 Nucleic acid-binding, OB-fold RD05_RS14795 IPR003136 Cytidylate kinase RD05_RS14795 IPR011994 Cytidylate kinase domain RD05_RS14795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14800 IPR001986 Enolpyruvate transferase domain RD05_RS14800 IPR036968 Enolpyruvate transferase domain superfamily RD05_RS14800 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RD05_RS14800 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RD05_RS14800 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RD05_RS14805 IPR036291 NAD(P)-binding domain superfamily RD05_RS14805 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS14805 IPR002912 ACT domain RD05_RS14805 IPR003099 Prephenate dehydrogenase RD05_RS14810 IPR001086 Prephenate dehydratase RD05_RS14810 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RD05_RS14810 IPR036263 Chorismate mutase type II superfamily RD05_RS14810 IPR036979 Chorismate mutase domain superfamily RD05_RS14810 IPR002912 ACT domain RD05_RS14810 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain RD05_RS14810 IPR018528 Prephenate dehydratase, conserved site RD05_RS14810 IPR002701 Chorismate mutase II, prokaryotic-type RD05_RS14815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS14815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS14815 IPR000192 Aminotransferase class V domain RD05_RS14815 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS14815 IPR022278 Phosphoserine aminotransferase RD05_RS14820 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RD05_RS14820 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RD05_RS14820 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat RD05_RS14820 IPR005743 DNA gyrase, subunit A RD05_RS14820 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RD05_RS14820 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RD05_RS14820 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily RD05_RS14825 IPR006665 OmpA-like domain RD05_RS14825 IPR036737 OmpA-like domain superfamily RD05_RS14825 IPR006664 Outer membrane protein, bacterial RD05_RS14825 IPR006690 Outer membrane protein, OmpA-like, conserved site RD05_RS14830 IPR010233 Ubiquinone biosynthesis O-methyltransferase RD05_RS14830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS14835 IPR006439 HAD hydrolase, subfamily IA RD05_RS14835 IPR041492 Haloacid dehalogenase-like hydrolase RD05_RS14835 IPR036412 HAD-like superfamily RD05_RS14835 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RD05_RS14835 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RD05_RS14835 IPR037512 Phosphoglycolate phosphatase, prokaryotic RD05_RS14835 IPR023214 HAD superfamily RD05_RS14840 IPR020846 Major facilitator superfamily domain RD05_RS14840 IPR036259 MFS transporter superfamily RD05_RS14840 IPR011701 Major facilitator superfamily RD05_RS14865 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS14865 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS14865 IPR000847 Transcription regulator HTH, LysR RD05_RS14865 IPR005119 LysR, substrate-binding RD05_RS14870 IPR005064 Bordetella uptake gene RD05_RS14870 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS14870 IPR042100 Bordetella uptake gene, domain 1 RD05_RS14880 IPR022880 DNA polymerase IV RD05_RS14880 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RD05_RS14880 IPR017961 DNA polymerase, Y-family, little finger domain RD05_RS14880 IPR001126 UmuC domain RD05_RS14880 IPR024728 DNA polymerase type-Y, HhH motif RD05_RS14890 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RD05_RS14890 IPR029058 Alpha/Beta hydrolase fold RD05_RS14890 IPR011042 Six-bladed beta-propeller, TolB-like RD05_RS14895 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS14895 IPR031376 Penicillin-binding protein, OB-like domain RD05_RS14895 IPR036950 Penicillin binding protein transglycosylase domain RD05_RS14895 IPR023346 Lysozyme-like domain superfamily RD05_RS14895 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS14895 IPR001264 Glycosyl transferase, family 51 RD05_RS14900 IPR029052 Metallo-dependent phosphatase-like RD05_RS14900 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase RD05_RS14900 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RD05_RS14915 IPR036812 NADP-dependent oxidoreductase domain superfamily RD05_RS14915 IPR023210 NADP-dependent oxidoreductase domain RD05_RS14915 IPR020471 Aldo/keto reductase RD05_RS14920 IPR018170 Aldo/keto reductase, conserved site RD05_RS14920 IPR036812 NADP-dependent oxidoreductase domain superfamily RD05_RS14920 IPR020471 Aldo/keto reductase RD05_RS14920 IPR023210 NADP-dependent oxidoreductase domain RD05_RS14925 IPR017871 ABC transporter, conserved site RD05_RS14925 IPR003439 ABC transporter-like RD05_RS14925 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS14925 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14925 IPR003593 AAA+ ATPase domain RD05_RS14925 IPR039421 Type I protein exporter RD05_RS14925 IPR036640 ABC transporter type 1, transmembrane domain superfamily RD05_RS14970 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RD05_RS14970 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RD05_RS14970 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS14970 IPR034733 Acetyl-CoA carboxylase RD05_RS14975 IPR016185 Pre-ATP-grasp domain superfamily RD05_RS14975 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS14975 IPR005482 Biotin carboxylase, C-terminal RD05_RS14975 IPR011764 Biotin carboxylation domain RD05_RS14975 IPR005481 Biotin carboxylase-like, N-terminal domain RD05_RS14975 IPR011761 ATP-grasp fold RD05_RS14975 IPR011054 Rudiment single hybrid motif RD05_RS14975 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RD05_RS14980 IPR011663 UbiC transcription regulator-associated RD05_RS14980 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS14980 IPR000524 Transcription regulator HTH, GntR RD05_RS14980 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS14980 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RD05_RS15000 IPR005776 Oxaloacetate decarboxylase, alpha subunit RD05_RS15000 IPR000891 Pyruvate carboxyltransferase RD05_RS15000 IPR003379 Carboxylase, conserved domain RD05_RS15000 IPR000089 Biotin/lipoyl attachment RD05_RS15000 IPR013785 Aldolase-type TIM barrel RD05_RS15000 IPR001882 Biotin-binding site RD05_RS15000 IPR011053 Single hybrid motif RD05_RS15005 IPR001249 Acetyl-CoA biotin carboxyl carrier RD05_RS15005 IPR000089 Biotin/lipoyl attachment RD05_RS15005 IPR011053 Single hybrid motif RD05_RS15005 IPR001882 Biotin-binding site RD05_RS15015 IPR006674 HD domain RD05_RS15015 IPR037522 HD-GYP domain RD05_RS15015 IPR006675 HDIG domain RD05_RS15015 IPR003607 HD/PDEase domain RD05_RS15035 IPR023787 Type III secretion system flagellar brake protein YcgR RD05_RS15035 IPR009875 PilZ domain RD05_RS15035 IPR012349 FMN-binding split barrel RD05_RS15035 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal RD05_RS15050 IPR025835 Thiopurine S-methyltransferase RD05_RS15050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS15050 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification RD05_RS15050 IPR008854 TPMT family RD05_RS15055 IPR036640 ABC transporter type 1, transmembrane domain superfamily RD05_RS15055 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS15055 IPR017871 ABC transporter, conserved site RD05_RS15055 IPR003439 ABC transporter-like RD05_RS15055 IPR003593 AAA+ ATPase domain RD05_RS15055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15055 IPR039421 Type I protein exporter RD05_RS15070 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS15070 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS15070 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS15070 IPR000399 TPP-binding enzyme, conserved site RD05_RS15070 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS15070 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS15070 IPR029061 Thiamin diphosphate-binding fold RD05_RS15070 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS15075 IPR004789 Acetolactate synthase, small subunit RD05_RS15075 IPR019455 Acetolactate synthase, small subunit, C-terminal RD05_RS15075 IPR002912 ACT domain RD05_RS15075 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal RD05_RS15075 IPR039557 AHAS, ACT domain RD05_RS15080 IPR036291 NAD(P)-binding domain superfamily RD05_RS15080 IPR000506 Ketol-acid reductoisomerase, C-terminal RD05_RS15080 IPR013023 Ketol-acid reductoisomerase RD05_RS15080 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS15080 IPR014359 Ketol-acid reductoisomerase, prokaryotic RD05_RS15080 IPR013116 Ketol-acid reductoisomerase, N-terminal RD05_RS15085 IPR000462 CDP-alcohol phosphatidyltransferase RD05_RS15085 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase RD05_RS15095 IPR000589 Ribosomal protein S15 RD05_RS15095 IPR009068 S15/NS1, RNA-binding RD05_RS15095 IPR005290 Ribosomal protein S15, bacterial-type RD05_RS15100 IPR001247 Exoribonuclease, phosphorolytic domain 1 RD05_RS15100 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS15100 IPR003029 S1 domain RD05_RS15100 IPR004087 K Homology domain RD05_RS15100 IPR036345 Exoribonuclease, PH domain 2 superfamily RD05_RS15100 IPR015847 Exoribonuclease, phosphorolytic domain 2 RD05_RS15100 IPR022967 RNA-binding domain, S1 RD05_RS15100 IPR004088 K Homology domain, type 1 RD05_RS15100 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily RD05_RS15100 IPR027408 PNPase/RNase PH domain superfamily RD05_RS15100 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RD05_RS15100 IPR012340 Nucleic acid-binding, OB-fold RD05_RS15100 IPR036612 K Homology domain, type 1 superfamily RD05_RS15100 IPR012162 Polyribonucleotide nucleotidyltransferase RD05_RS15115 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS15115 IPR002912 ACT domain RD05_RS15115 IPR001926 Pyridoxal-phosphate dependent enzyme RD05_RS15115 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RD05_RS15115 IPR005789 Threonine dehydratase, catabolic RD05_RS15130 IPR013154 Alcohol dehydrogenase, N-terminal RD05_RS15130 IPR006162 Phosphopantetheine attachment site RD05_RS15130 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD05_RS15130 IPR014043 Acyl transferase RD05_RS15130 IPR011032 GroES-like superfamily RD05_RS15130 IPR032821 Ketoacyl-synthetase, C-terminal extension RD05_RS15130 IPR016039 Thiolase-like RD05_RS15130 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RD05_RS15130 IPR018201 Beta-ketoacyl synthase, active site RD05_RS15130 IPR036736 ACP-like superfamily RD05_RS15130 IPR014030 Beta-ketoacyl synthase, N-terminal RD05_RS15130 IPR014031 Beta-ketoacyl synthase, C-terminal RD05_RS15130 IPR009081 Phosphopantetheine binding ACP domain RD05_RS15130 IPR036291 NAD(P)-binding domain superfamily RD05_RS15130 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RD05_RS15130 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD05_RS15130 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RD05_RS15130 IPR015083 Polyketide synthase, docking domain RD05_RS15130 IPR042104 Polyketide synthase, dehydratase domain superfamily RD05_RS15130 IPR020843 Polyketide synthase, enoylreductase domain RD05_RS15130 IPR013968 Polyketide synthase, ketoreductase domain RD05_RS15130 IPR020807 Polyketide synthase, dehydratase domain RD05_RS15130 IPR001227 Acyl transferase domain superfamily RD05_RS15135 IPR035990 Triosephosphate isomerase superfamily RD05_RS15135 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RD05_RS15135 IPR000652 Triosephosphate isomerase RD05_RS15135 IPR020861 Triosephosphate isomerase, active site RD05_RS15135 IPR013785 Aldolase-type TIM barrel RD05_RS15140 IPR004692 Preprotein translocase SecG subunit RD05_RS15150 IPR000060 BCCT transporter family RD05_RS15150 IPR018093 BCCT transporter, conserved site RD05_RS15160 IPR029017 Enolase-like, N-terminal RD05_RS15160 IPR022665 Methylaspartate ammonia-lyase, N-terminal RD05_RS15160 IPR022662 Methylaspartate ammonia-lyase, C-terminal RD05_RS15160 IPR006395 Methylaspartate ammonia-lyase RD05_RS15160 IPR036849 Enolase-like, C-terminal domain superfamily RD05_RS15165 IPR042100 Bordetella uptake gene, domain 1 RD05_RS15165 IPR005064 Bordetella uptake gene RD05_RS15180 IPR009049 Argininosuccinate lyase RD05_RS15180 IPR008948 L-Aspartase-like RD05_RS15180 IPR022761 Fumarate lyase, N-terminal RD05_RS15180 IPR000362 Fumarate lyase family RD05_RS15180 IPR020557 Fumarate lyase, conserved site RD05_RS15180 IPR024083 Fumarase/histidase, N-terminal RD05_RS15180 IPR029419 Argininosuccinate lyase, C-terminal RD05_RS15185 IPR005064 Bordetella uptake gene RD05_RS15185 IPR042100 Bordetella uptake gene, domain 1 RD05_RS15195 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS15195 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS15195 IPR036291 NAD(P)-binding domain superfamily RD05_RS15200 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS15200 IPR000847 Transcription regulator HTH, LysR RD05_RS15200 IPR005119 LysR, substrate-binding RD05_RS15200 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS15205 IPR006233 Cystathionine beta-lyase, bacterial RD05_RS15205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS15205 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD05_RS15205 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS15210 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB RD05_RS15210 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD05_RS15225 IPR005064 Bordetella uptake gene RD05_RS15225 IPR042100 Bordetella uptake gene, domain 1 RD05_RS15230 IPR006076 FAD dependent oxidoreductase RD05_RS15230 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS15240 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD05_RS15240 IPR002821 Hydantoinase A/oxoprolinase RD05_RS15250 IPR000923 Blue (type 1) copper domain RD05_RS15250 IPR014068 Azurin RD05_RS15250 IPR028871 Blue (type 1) copper protein, binding site RD05_RS15250 IPR008972 Cupredoxin RD05_RS15260 IPR003423 Outer membrane efflux protein RD05_RS15260 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD05_RS15265 IPR001036 Acriflavin resistance protein RD05_RS15265 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS15270 IPR006143 RND efflux pump, membrane fusion protein RD05_RS15270 IPR022824 Multidrug resistance protein MdtA RD05_RS15270 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RD05_RS15275 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15275 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS15275 IPR002577 Helix-turn-helix, HxlR type RD05_RS15285 IPR000060 BCCT transporter family RD05_RS15285 IPR018093 BCCT transporter, conserved site RD05_RS15290 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15290 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS15290 IPR005119 LysR, substrate-binding RD05_RS15290 IPR000847 Transcription regulator HTH, LysR RD05_RS15295 IPR005218 Diacylglycerol/lipid kinase RD05_RS15295 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RD05_RS15295 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RD05_RS15295 IPR001206 Diacylglycerol kinase, catalytic domain RD05_RS15305 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily RD05_RS15305 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RD05_RS15330 IPR002299 Porin, Neisseria sp. type RD05_RS15330 IPR001702 Porin, Gram-negative type RD05_RS15330 IPR023614 Porin domain superfamily RD05_RS15330 IPR033900 Porin domain, Gram-negative type RD05_RS15335 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily RD05_RS15335 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RD05_RS15335 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RD05_RS15340 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RD05_RS15340 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RD05_RS15345 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site RD05_RS15345 IPR010218 NADH dehydrogenase, subunit C RD05_RS15345 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RD05_RS15345 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily RD05_RS15350 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RD05_RS15350 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily RD05_RS15350 IPR029014 [NiFe]-hydrogenase, large subunit RD05_RS15350 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RD05_RS15350 IPR001135 NADH-quinone oxidoreductase, subunit D RD05_RS15355 IPR002023 NADH-quinone oxidoreductase subunit E-like RD05_RS15355 IPR036249 Thioredoxin-like superfamily RD05_RS15355 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal RD05_RS15355 IPR042128 NuoE domain RD05_RS15360 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RD05_RS15360 IPR011537 NADH ubiquinone oxidoreductase, F subunit RD05_RS15360 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain RD05_RS15360 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily RD05_RS15360 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain RD05_RS15360 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily RD05_RS15360 IPR019554 Soluble ligand binding domain RD05_RS15365 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RD05_RS15365 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS15365 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RD05_RS15365 IPR006656 Molybdopterin oxidoreductase RD05_RS15365 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal RD05_RS15365 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RD05_RS15365 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS15365 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RD05_RS15370 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RD05_RS15370 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RD05_RS15375 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS15375 IPR010226 NADH-quinone oxidoreductase, chain I RD05_RS15375 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS15380 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ RD05_RS15380 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RD05_RS15385 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RD05_RS15385 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RD05_RS15390 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RD05_RS15390 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RD05_RS15390 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RD05_RS15390 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RD05_RS15395 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal RD05_RS15395 IPR003918 NADH:ubiquinone oxidoreductase RD05_RS15395 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RD05_RS15395 IPR010227 NADH-quinone oxidoreductase, chain M/4 RD05_RS15400 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RD05_RS15400 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RD05_RS15410 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS15410 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS15410 IPR012910 TonB-dependent receptor, plug domain RD05_RS15410 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS15410 IPR039423 TonB-dependent receptor-like RD05_RS15410 IPR010105 TonB-dependent siderophore receptor RD05_RS15410 IPR030148 Catecholate siderophore receptor Fiu RD05_RS15415 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS15415 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS15415 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS15415 IPR039423 TonB-dependent receptor-like RD05_RS15415 IPR010105 TonB-dependent siderophore receptor RD05_RS15415 IPR012910 TonB-dependent receptor, plug domain RD05_RS15415 IPR030148 Catecholate siderophore receptor Fiu RD05_RS15425 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS15425 IPR036291 NAD(P)-binding domain superfamily RD05_RS15425 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS15425 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS15430 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS15430 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS15430 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS15430 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS15430 IPR029061 Thiamin diphosphate-binding fold RD05_RS15430 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS15430 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS15435 IPR005064 Bordetella uptake gene RD05_RS15435 IPR042100 Bordetella uptake gene, domain 1 RD05_RS15440 IPR005119 LysR, substrate-binding RD05_RS15440 IPR000847 Transcription regulator HTH, LysR RD05_RS15440 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15440 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS15445 IPR036412 HAD-like superfamily RD05_RS15445 IPR023214 HAD superfamily RD05_RS15450 IPR037235 TRCF-like, C-terminal domain RD05_RS15450 IPR036101 CarD-like/TRCF domain superfamily RD05_RS15450 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS15450 IPR001650 Helicase, C-terminal RD05_RS15450 IPR004576 Transcription-repair coupling factor RD05_RS15450 IPR011545 DEAD/DEAH box helicase domain RD05_RS15450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15450 IPR041471 UvrB, interaction domain RD05_RS15450 IPR005118 Transcription-repair-coupling factor, C-terminal domain RD05_RS15450 IPR003711 CarD-like/TRCF domain RD05_RS15455 IPR034683 Cytidylyltransferase IspD/TarI RD05_RS15455 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD05_RS15455 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS15455 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RD05_RS15460 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RD05_RS15460 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily RD05_RS15460 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RD05_RS15470 IPR028343 Fructose-1,6-bisphosphatase RD05_RS15470 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal RD05_RS15470 IPR000146 Fructose-1,6-bisphosphatase class 1 RD05_RS15475 IPR012779 Peptidase M1, alanyl aminopeptidase RD05_RS15475 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily RD05_RS15475 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold RD05_RS15475 IPR027268 Peptidase M4/M1, CTD superfamily RD05_RS15475 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RD05_RS15475 IPR042097 Aminopeptidase N-like , N-terminal RD05_RS15475 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily RD05_RS15475 IPR014782 Peptidase M1, membrane alanine aminopeptidase RD05_RS15475 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RD05_RS15495 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS15495 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS15495 IPR000399 TPP-binding enzyme, conserved site RD05_RS15495 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS15495 IPR029061 Thiamin diphosphate-binding fold RD05_RS15495 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS15495 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS15495 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS15505 IPR015168 SsuA/THI5-like RD05_RS15505 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS15505 IPR010067 Aliphatic sulfonates-binding protein RD05_RS15510 IPR015859 ABC transporter, taurine import, TauD RD05_RS15510 IPR017871 ABC transporter, conserved site RD05_RS15510 IPR003439 ABC transporter-like RD05_RS15510 IPR003593 AAA+ ATPase domain RD05_RS15510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS15515 IPR035906 MetI-like superfamily RD05_RS15525 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS15525 IPR020845 AMP-binding, conserved site RD05_RS15525 IPR000873 AMP-dependent synthetase/ligase RD05_RS15525 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS15530 IPR020843 Polyketide synthase, enoylreductase domain RD05_RS15530 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD05_RS15530 IPR036291 NAD(P)-binding domain superfamily RD05_RS15530 IPR011032 GroES-like superfamily RD05_RS15530 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS15530 IPR013154 Alcohol dehydrogenase, N-terminal RD05_RS15535 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS15535 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS15535 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15535 IPR000485 AsnC-type HTH domain RD05_RS15535 IPR000524 Transcription regulator HTH, GntR RD05_RS15535 IPR011711 GntR, C-terminal RD05_RS15545 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS15545 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS15545 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15545 IPR000524 Transcription regulator HTH, GntR RD05_RS15545 IPR011711 GntR, C-terminal RD05_RS15550 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS15550 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS15550 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS15550 IPR029061 Thiamin diphosphate-binding fold RD05_RS15550 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS15550 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS15550 IPR000399 TPP-binding enzyme, conserved site RD05_RS15550 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS15555 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS15555 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS15555 IPR011283 Acetoacetyl-CoA reductase RD05_RS15555 IPR036291 NAD(P)-binding domain superfamily RD05_RS15570 IPR001544 Aminotransferase class IV RD05_RS15570 IPR018300 Aminotransferase, class IV, conserved site RD05_RS15570 IPR036038 Aminotransferase-like, PLP-dependent enzymes RD05_RS15570 IPR005784 D-amino acid aminotransferase RD05_RS15575 IPR003439 ABC transporter-like RD05_RS15575 IPR003593 AAA+ ATPase domain RD05_RS15575 IPR017871 ABC transporter, conserved site RD05_RS15575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15575 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS15580 IPR035906 MetI-like superfamily RD05_RS15580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS15580 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM RD05_RS15580 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS15590 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS15595 IPR000847 Transcription regulator HTH, LysR RD05_RS15595 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS15595 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15595 IPR017685 HTH-type transcriptional regulator ArgP RD05_RS15595 IPR005119 LysR, substrate-binding RD05_RS15600 IPR028351 Cyclolysin transport protein CyaE RD05_RS15600 IPR003423 Outer membrane efflux protein RD05_RS15605 IPR010129 Type I secretion membrane fusion protein, HlyD family RD05_RS15605 IPR039562 Membrane fusion protein, biotin-lipoyl like domain RD05_RS15605 IPR006144 Secretion protein HlyD, conserved site RD05_RS15610 IPR010132 ATPase, type I secretion system, HlyB RD05_RS15610 IPR003593 AAA+ ATPase domain RD05_RS15610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15610 IPR039421 Type I protein exporter RD05_RS15610 IPR005074 Peptidase C39, bacteriocin processing RD05_RS15610 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS15610 IPR003439 ABC transporter-like RD05_RS15610 IPR017871 ABC transporter, conserved site RD05_RS15610 IPR036640 ABC transporter type 1, transmembrane domain superfamily RD05_RS15610 IPR039395 Peptidase C39-like A RD05_RS15615 IPR037017 Anthrax toxin, edema factor, central domain superfamily RD05_RS15615 IPR011049 Serralysin-like metalloprotease, C-terminal RD05_RS15615 IPR003995 RTX toxin determinant A RD05_RS15615 IPR005165 Anthrax toxin, edema factor, central RD05_RS15615 IPR035099 Anthrax toxin, edema factor, C-terminal RD05_RS15615 IPR001343 RTX calcium-binding nonapeptide repeat RD05_RS15615 IPR018511 Hemolysin-type calcium-binding conserved site RD05_RS15615 IPR018504 RTX N-terminal RD05_RS15625 IPR003996 RTX toxin-activating protein C, bacteria RD05_RS15630 IPR010102 Succinate semialdehyde dehydrogenase RD05_RS15630 IPR015590 Aldehyde dehydrogenase domain RD05_RS15630 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS15630 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS15630 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS15630 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS15630 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS15640 IPR006076 FAD dependent oxidoreductase RD05_RS15640 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS15640 IPR006278 Sarcosine oxidase subunit beta RD05_RS15645 IPR003692 Hydantoinase B/oxoprolinase RD05_RS15650 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD05_RS15650 IPR002821 Hydantoinase A/oxoprolinase RD05_RS15655 IPR005119 LysR, substrate-binding RD05_RS15655 IPR000847 Transcription regulator HTH, LysR RD05_RS15655 IPR037414 Transcriptional activator protein LysR, PBP2 domain RD05_RS15655 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15655 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS15665 IPR033749 Polyprenyl synthetase, conserved site RD05_RS15665 IPR008949 Isoprenoid synthase domain superfamily RD05_RS15665 IPR000092 Polyprenyl synthetase RD05_RS15675 IPR018258 Ribosomal protein L21, conserved site RD05_RS15675 IPR001787 Ribosomal protein L21 RD05_RS15675 IPR028909 Ribosomal protein L21-like RD05_RS15675 IPR036164 L21-like superfamily RD05_RS15680 IPR001684 Ribosomal protein L27 RD05_RS15680 IPR018261 Ribosomal protein L27, conserved site RD05_RS15685 IPR006073 GTP binding domain RD05_RS15685 IPR031167 OBG-type guanine nucleotide-binding (G) domain RD05_RS15685 IPR035101 GTP-binding protein, Obg-type RD05_RS15685 IPR014100 GTP-binding protein Obg/CgtA RD05_RS15685 IPR006074 GTP1/OBG, conserved site RD05_RS15685 IPR006169 GTP1/OBG domain RD05_RS15685 IPR036726 GTP1/OBG domain superfamily RD05_RS15685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15690 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS15690 IPR011529 Glutamate 5-kinase RD05_RS15690 IPR041739 Glutamate-5-kinase domain RD05_RS15690 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase RD05_RS15690 IPR036393 Acetylglutamate kinase-like superfamily RD05_RS15690 IPR036974 PUA domain superfamily RD05_RS15690 IPR015947 PUA-like superfamily RD05_RS15690 IPR002478 PUA domain RD05_RS15690 IPR001057 Glutamate/acetylglutamate kinase RD05_RS15690 IPR019797 Glutamate 5-kinase, conserved site RD05_RS15730 IPR006860 FecR protein RD05_RS15730 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD05_RS15730 IPR032623 FecR, N-terminal RD05_RS15735 IPR010916 TonB box, conserved site RD05_RS15735 IPR010917 TonB-dependent receptor, conserved site RD05_RS15735 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS15735 IPR010105 TonB-dependent siderophore receptor RD05_RS15735 IPR039423 TonB-dependent receptor-like RD05_RS15735 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS15735 IPR012910 TonB-dependent receptor, plug domain RD05_RS15735 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS15740 IPR023480 Uncharacterised protein family UPF0312/YceI RD05_RS15740 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily RD05_RS15740 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RD05_RS15755 IPR036291 NAD(P)-binding domain superfamily RD05_RS15755 IPR032095 Saccharopine dehydrogenase, C-terminal RD05_RS15755 IPR005097 Saccharopine dehydrogenase, NADP binding domain RD05_RS15760 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD05_RS15760 IPR029066 PLP-binding barrel RD05_RS15760 IPR005730 Carboxynorspermidine decarboxylase RD05_RS15760 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RD05_RS15780 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS15780 IPR000914 Solute-binding protein family 5 domain RD05_RS15780 IPR023765 Solute-binding protein family 5, conserved site RD05_RS15780 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS15780 IPR039424 Solute-binding protein family 5 RD05_RS15785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS15785 IPR035906 MetI-like superfamily RD05_RS15790 IPR035906 MetI-like superfamily RD05_RS15790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS15795 IPR003593 AAA+ ATPase domain RD05_RS15795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15795 IPR017871 ABC transporter, conserved site RD05_RS15795 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS15795 IPR003439 ABC transporter-like RD05_RS15800 IPR023631 Amidase signature domain RD05_RS15800 IPR000120 Amidase RD05_RS15800 IPR020556 Amidase, conserved site RD05_RS15800 IPR036928 Amidase signature (AS) superfamily RD05_RS15805 IPR005814 Aminotransferase class-III RD05_RS15805 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS15805 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS15805 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS15815 IPR039556 ICL/PEPM domain RD05_RS15815 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RD05_RS15815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS15815 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS15825 IPR007055 BON domain RD05_RS15825 IPR036737 OmpA-like domain superfamily RD05_RS15825 IPR006690 Outer membrane protein, OmpA-like, conserved site RD05_RS15825 IPR006665 OmpA-like domain RD05_RS15825 IPR006664 Outer membrane protein, bacterial RD05_RS15830 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily RD05_RS15830 IPR001533 Pterin 4 alpha carbinolamine dehydratase RD05_RS15840 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS15840 IPR005835 Nucleotidyl transferase domain RD05_RS15845 IPR011009 Protein kinase-like domain superfamily RD05_RS15845 IPR002575 Aminoglycoside phosphotransferase RD05_RS15850 IPR007543 LptD, C-terminal RD05_RS15850 IPR020889 LPS-assembly protein LptD RD05_RS15855 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD05_RS15855 IPR027304 Trigger factor/SurA domain superfamily RD05_RS15855 IPR023034 Peptidyl-prolyl isomerase SurA RD05_RS15855 IPR015391 SurA N-terminal RD05_RS15860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS15860 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RD05_RS15860 IPR011530 Ribosomal RNA adenine dimethylase RD05_RS15860 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RD05_RS15860 IPR023165 rRNA adenine dimethylase-like RD05_RS15860 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RD05_RS15865 IPR036129 Glycerate kinase superfamily RD05_RS15865 IPR018193 Glycerate kinase, flavodoxin-like fold RD05_RS15865 IPR004381 Glycerate kinase RD05_RS15865 IPR018197 Glycerate kinase, restriction-enzyme-like fold RD05_RS15870 IPR011037 Pyruvate kinase-like, insert domain superfamily RD05_RS15870 IPR015795 Pyruvate kinase, C-terminal RD05_RS15870 IPR036918 Pyruvate kinase, C-terminal domain superfamily RD05_RS15870 IPR015806 Pyruvate kinase, insert domain superfamily RD05_RS15870 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS15870 IPR001697 Pyruvate kinase RD05_RS15870 IPR018209 Pyruvate kinase, active site RD05_RS15870 IPR040442 Pyruvate kinase-like domain superfamily RD05_RS15870 IPR015793 Pyruvate kinase, barrel RD05_RS15875 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain RD05_RS15880 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS15880 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS15880 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type RD05_RS15880 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS15880 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS15880 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS15880 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS15895 IPR005064 Bordetella uptake gene RD05_RS15895 IPR042100 Bordetella uptake gene, domain 1 RD05_RS15900 IPR042100 Bordetella uptake gene, domain 1 RD05_RS15900 IPR005064 Bordetella uptake gene RD05_RS15905 IPR017871 ABC transporter, conserved site RD05_RS15905 IPR003593 AAA+ ATPase domain RD05_RS15905 IPR003439 ABC transporter-like RD05_RS15905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15905 IPR015863 ABC transporter, hemin import, HmuV RD05_RS15910 IPR000522 ABC transporter, permease protein, BtuC-like RD05_RS15910 IPR037294 ABC transporter, BtuC-like RD05_RS15920 IPR036737 OmpA-like domain superfamily RD05_RS15920 IPR006690 Outer membrane protein, OmpA-like, conserved site RD05_RS15920 IPR039001 Peptidoglycan-associated lipoprotein RD05_RS15920 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal RD05_RS15920 IPR006664 Outer membrane protein, bacterial RD05_RS15920 IPR006665 OmpA-like domain RD05_RS15925 IPR011659 WD40-like Beta Propeller RD05_RS15925 IPR014167 Tol-Pal system protein TolB RD05_RS15925 IPR007195 TolB, N-terminal RD05_RS15925 IPR036752 TolB, N-terminal domain superfamily RD05_RS15925 IPR011042 Six-bladed beta-propeller, TolB-like RD05_RS15935 IPR014168 Tol-Pal system protein TolR RD05_RS15935 IPR003400 Biopolymer transport protein ExbD/TolR RD05_RS15940 IPR014163 Tol-Pal system, TolQ RD05_RS15940 IPR002898 MotA/TolQ/ExbB proton channel RD05_RS15945 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site RD05_RS15945 IPR029069 HotDog domain superfamily RD05_RS15945 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family RD05_RS15945 IPR006683 Thioesterase domain RD05_RS15945 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase RD05_RS15950 IPR036621 Anticodon-binding domain superfamily RD05_RS15950 IPR033730 Prokaryote proline-tRNA ligase core domain RD05_RS15950 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily RD05_RS15950 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RD05_RS15950 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RD05_RS15950 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RD05_RS15950 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RD05_RS15950 IPR002316 Proline-tRNA ligase, class IIa RD05_RS15950 IPR006195 Aminoacyl-tRNA synthetase, class II RD05_RS15950 IPR004154 Anticodon-binding RD05_RS15955 IPR015797 NUDIX hydrolase-like domain superfamily RD05_RS15955 IPR020084 NUDIX hydrolase, conserved site RD05_RS15955 IPR000086 NUDIX hydrolase domain RD05_RS15955 IPR020476 NUDIX hydrolase RD05_RS15955 IPR022927 RNA pyrophosphohydrolase RppH RD05_RS15960 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS15960 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS15960 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS15960 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS15960 IPR001789 Signal transduction response regulator, receiver domain RD05_RS15960 IPR011006 CheY-like superfamily RD05_RS15970 IPR003738 SOS response associated peptidase (SRAP) RD05_RS15970 IPR036590 SOS response associated peptidase-like RD05_RS16035 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal RD05_RS16175 IPR004872 Lipoprotein NlpA family RD05_RS16185 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RD05_RS16185 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RD05_RS16185 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RD05_RS16185 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RD05_RS16190 IPR017871 ABC transporter, conserved site RD05_RS16190 IPR003593 AAA+ ATPase domain RD05_RS16190 IPR003439 ABC transporter-like RD05_RS16190 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS16190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16195 IPR003439 ABC transporter-like RD05_RS16195 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS16195 IPR017871 ABC transporter, conserved site RD05_RS16195 IPR003593 AAA+ ATPase domain RD05_RS16195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16200 IPR001851 ABC transporter, permease RD05_RS16205 IPR001851 ABC transporter, permease RD05_RS16205 IPR030158 Galactoside transport system permease protein MglC RD05_RS16210 IPR028082 Periplasmic binding protein-like I RD05_RS16210 IPR028081 Leucine-binding protein domain RD05_RS16210 IPR000709 Leu/Ile/Val-binding protein RD05_RS16215 IPR036928 Amidase signature (AS) superfamily RD05_RS16215 IPR020556 Amidase, conserved site RD05_RS16215 IPR000120 Amidase RD05_RS16215 IPR023631 Amidase signature domain RD05_RS16215 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS16220 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site RD05_RS16220 IPR001765 Carbonic anhydrase RD05_RS16220 IPR036874 Carbonic anhydrase superfamily RD05_RS16235 IPR010997 HRDC-like superfamily RD05_RS16235 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS16235 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial RD05_RS16235 IPR004589 DNA helicase, ATP-dependent, RecQ type RD05_RS16235 IPR011545 DEAD/DEAH box helicase domain RD05_RS16235 IPR002121 HRDC domain RD05_RS16235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16235 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RD05_RS16235 IPR018982 RQC domain RD05_RS16235 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16235 IPR001650 Helicase, C-terminal RD05_RS16240 IPR004605 DNA helicase, Holliday junction RuvB-type RD05_RS16240 IPR008824 RuvB-like P-loop domain RD05_RS16240 IPR008823 RuvB C-terminal winged helix domain RD05_RS16240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16240 IPR003593 AAA+ ATPase domain RD05_RS16240 IPR041445 RuvB, AAA lid domain RD05_RS16240 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16240 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16245 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RD05_RS16245 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS16245 IPR001926 Pyridoxal-phosphate dependent enzyme RD05_RS16250 IPR036291 NAD(P)-binding domain superfamily RD05_RS16250 IPR001509 NAD-dependent epimerase/dehydratase RD05_RS16255 IPR000085 Bacterial DNA recombination protein RuvA RD05_RS16255 IPR010994 RuvA domain 2-like RD05_RS16255 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD05_RS16255 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RD05_RS16255 IPR011114 Holliday junction DNA helicase RuvA, C-terminal RD05_RS16255 IPR036267 RuvA, C-terminal domain superfamily RD05_RS16255 IPR012340 Nucleic acid-binding, OB-fold RD05_RS16260 IPR002176 Crossover junction endodeoxyribonuclease RuvC RD05_RS16260 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RD05_RS16260 IPR036397 Ribonuclease H superfamily RD05_RS16260 IPR012337 Ribonuclease H-like superfamily RD05_RS16265 IPR016193 Cytidine deaminase-like RD05_RS16265 IPR002695 Bifunctional purine biosynthesis protein PurH-like RD05_RS16265 IPR024051 AICAR transformylase, duplicated domain superfamily RD05_RS16265 IPR011607 Methylglyoxal synthase-like domain RD05_RS16265 IPR036914 Methylglyoxal synthase-like domain superfamily RD05_RS16270 IPR005412 DNA-binding protein Fis RD05_RS16270 IPR002197 DNA binding HTH domain, Fis-type RD05_RS16270 IPR009057 Homeobox-like domain superfamily RD05_RS16275 IPR001269 tRNA-dihydrouridine synthase RD05_RS16275 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RD05_RS16275 IPR035587 DUS-like, FMN-binding domain RD05_RS16275 IPR018517 tRNA-dihydrouridine synthase, conserved site RD05_RS16275 IPR013785 Aldolase-type TIM barrel RD05_RS16275 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RD05_RS16275 IPR032887 tRNA-dihydrouridine synthase B RD05_RS16280 IPR002938 FAD-binding domain RD05_RS16280 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS16280 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RD05_RS16280 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase RD05_RS16280 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 RD05_RS16290 IPR001714 Peptidase M24, methionine aminopeptidase RD05_RS16290 IPR000994 Peptidase M24 RD05_RS16290 IPR007865 Aminopeptidase P, N-terminal RD05_RS16290 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RD05_RS16290 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RD05_RS16290 IPR036005 Creatinase/aminopeptidase-like RD05_RS16315 IPR023614 Porin domain superfamily RD05_RS16315 IPR001702 Porin, Gram-negative type RD05_RS16315 IPR033900 Porin domain, Gram-negative type RD05_RS16315 IPR002299 Porin, Neisseria sp. type RD05_RS16325 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS16325 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RD05_RS16325 IPR005835 Nucleotidyl transferase domain RD05_RS16330 IPR011990 Tetratricopeptide-like helical domain superfamily RD05_RS16330 IPR030873 Beta-barrel assembly-enhancing protease RD05_RS16330 IPR001915 Peptidase M48 RD05_RS16330 IPR013026 Tetratricopeptide repeat-containing domain RD05_RS16330 IPR019734 Tetratricopeptide repeat RD05_RS16335 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS16335 IPR029058 Alpha/Beta hydrolase fold RD05_RS16335 IPR000952 AB hydrolase 4, conserved site RD05_RS16335 IPR012020 AB hydrolase 4 family RD05_RS16350 IPR005785 Branched-chain amino acid aminotransferase I RD05_RS16350 IPR036038 Aminotransferase-like, PLP-dependent enzymes RD05_RS16350 IPR033939 Branched-chain aminotransferase RD05_RS16350 IPR001544 Aminotransferase class IV RD05_RS16350 IPR018300 Aminotransferase, class IV, conserved site RD05_RS16365 IPR011545 DEAD/DEAH box helicase domain RD05_RS16365 IPR014014 RNA helicase, DEAD-box type, Q motif RD05_RS16365 IPR028622 ATP-dependent RNA helicase RhlE RD05_RS16365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16365 IPR001650 Helicase, C-terminal RD05_RS16365 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS16365 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RD05_RS16385 IPR036653 CinA-like, C-terminal RD05_RS16385 IPR008136 CinA, C-terminal RD05_RS16385 IPR001453 MoaB/Mog domain RD05_RS16385 IPR041424 CinA, KH domain RD05_RS16385 IPR008135 Competence-induced protein CinA RD05_RS16385 IPR036425 MoaB/Mog-like domain superfamily RD05_RS16390 IPR014757 Transcription regulator IclR, C-terminal RD05_RS16390 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16390 IPR029016 GAF-like domain superfamily RD05_RS16390 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16390 IPR005471 Transcription regulator IclR, N-terminal RD05_RS16395 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily RD05_RS16395 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain RD05_RS16395 IPR041508 Toxin complex C-like repeat RD05_RS16395 IPR022385 Rhs repeat-associated core RD05_RS16395 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD05_RS16400 IPR042100 Bordetella uptake gene, domain 1 RD05_RS16400 IPR005064 Bordetella uptake gene RD05_RS16410 IPR005720 Dihydroorotate dehydrogenase domain RD05_RS16410 IPR001295 Dihydroorotate dehydrogenase, conserved site RD05_RS16410 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 RD05_RS16410 IPR013785 Aldolase-type TIM barrel RD05_RS16410 IPR005719 Dihydroorotate dehydrogenase, class 2 RD05_RS16415 IPR030700 N-end rule aminoacyl transferase RD05_RS16415 IPR007472 N-end rule aminoacyl transferase, C-terminal RD05_RS16415 IPR017138 Aspartate/glutamate leucyltransferase RD05_RS16415 IPR016181 Acyl-CoA N-acyltransferase RD05_RS16415 IPR007471 N-end aminoacyl transferase, N-terminal RD05_RS16420 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase RD05_RS16420 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal RD05_RS16420 IPR016181 Acyl-CoA N-acyltransferase RD05_RS16430 IPR005119 LysR, substrate-binding RD05_RS16430 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16430 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16430 IPR000847 Transcription regulator HTH, LysR RD05_RS16470 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16470 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16470 IPR000524 Transcription regulator HTH, GntR RD05_RS16470 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS16470 IPR011711 GntR, C-terminal RD05_RS16475 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS16475 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS16475 IPR029061 Thiamin diphosphate-binding fold RD05_RS16475 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS16475 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS16475 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS16475 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS16480 IPR005064 Bordetella uptake gene RD05_RS16480 IPR042100 Bordetella uptake gene, domain 1 RD05_RS16485 IPR042098 Taurine dioxygenase TauD-like superfamily RD05_RS16485 IPR003819 TauD/TfdA-like domain RD05_RS16490 IPR015884 Malic enzyme, conserved site RD05_RS16490 IPR042112 Phosphate acetyltransferase, domain 2 RD05_RS16490 IPR012302 Malic enzyme, NAD-binding RD05_RS16490 IPR037062 Malic enzyme, N-terminal domain superfamily RD05_RS16490 IPR036291 NAD(P)-binding domain superfamily RD05_RS16490 IPR042113 Phosphate acetyltransferase, domain 1 RD05_RS16490 IPR012188 NAD(P)-dependent malic enzyme RD05_RS16490 IPR002505 Phosphate acetyl/butaryl transferase RD05_RS16490 IPR012301 Malic enzyme, N-terminal domain RD05_RS16500 IPR035906 MetI-like superfamily RD05_RS16500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS16505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS16505 IPR035906 MetI-like superfamily RD05_RS16510 IPR003439 ABC transporter-like RD05_RS16510 IPR017871 ABC transporter, conserved site RD05_RS16510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16510 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS16510 IPR003593 AAA+ ATPase domain RD05_RS16525 IPR005119 LysR, substrate-binding RD05_RS16525 IPR000847 Transcription regulator HTH, LysR RD05_RS16525 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16525 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16540 IPR011991 ArsR-like helix-turn-helix domain RD05_RS16540 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16540 IPR001845 HTH ArsR-type DNA-binding domain RD05_RS16540 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16555 IPR004711 Benzoate transporter RD05_RS16560 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS16560 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS16565 IPR001980 Phosphopantetheine adenylyltransferase RD05_RS16565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS16565 IPR004821 Cytidyltransferase-like domain RD05_RS16570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS16570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS16570 IPR004398 RNA methyltransferase, RsmD RD05_RS16575 IPR036225 SRP/SRP receptor, N-terminal RD05_RS16575 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily RD05_RS16575 IPR013822 Signal recognition particle SRP54, helical bundle RD05_RS16575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16575 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD05_RS16575 IPR003593 AAA+ ATPase domain RD05_RS16575 IPR004390 Signal-recognition particle receptor FtsY RD05_RS16590 IPR035906 MetI-like superfamily RD05_RS16590 IPR005769 ABC transporter, permease PhnE/PtxC RD05_RS16590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS16595 IPR005769 ABC transporter, permease PhnE/PtxC RD05_RS16595 IPR035906 MetI-like superfamily RD05_RS16595 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS16600 IPR012693 ABC transporter, phosphonate import, PhnC RD05_RS16600 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16600 IPR003593 AAA+ ATPase domain RD05_RS16600 IPR017871 ABC transporter, conserved site RD05_RS16600 IPR003439 ABC transporter-like RD05_RS16610 IPR017871 ABC transporter, conserved site RD05_RS16610 IPR003439 ABC transporter-like RD05_RS16610 IPR012693 ABC transporter, phosphonate import, PhnC RD05_RS16610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16610 IPR003593 AAA+ ATPase domain RD05_RS16630 IPR036144 RibA-like superfamily RD05_RS16630 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RD05_RS16630 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RD05_RS16630 IPR032677 GTP cyclohydrolase II RD05_RS16635 IPR002180 Lumazine/riboflavin synthase RD05_RS16635 IPR034964 Lumazine synthase RD05_RS16635 IPR036467 Lumazine/riboflavin synthase superfamily RD05_RS16640 IPR035926 NusB-like superfamily RD05_RS16640 IPR006027 NusB/RsmB/TIM44 RD05_RS16640 IPR011605 NusB antitermination factor RD05_RS16645 IPR016188 PurM-like, N-terminal domain RD05_RS16645 IPR010918 PurM-like, C-terminal domain RD05_RS16645 IPR006283 Thiamine-monophosphate kinase RD05_RS16645 IPR036921 PurM-like, N-terminal domain superfamily RD05_RS16645 IPR036676 PurM-like, C-terminal domain superfamily RD05_RS16650 IPR036681 PgpA-like superfamily RD05_RS16650 IPR007686 YutG/PgpA domain RD05_RS16650 IPR026037 Phosphatidylglycerophosphatase A RD05_RS16655 IPR008135 Competence-induced protein CinA RD05_RS16655 IPR041424 CinA, KH domain RD05_RS16655 IPR036653 CinA-like, C-terminal RD05_RS16655 IPR008136 CinA, C-terminal RD05_RS16655 IPR001453 MoaB/Mog domain RD05_RS16655 IPR036425 MoaB/Mog-like domain superfamily RD05_RS16660 IPR011060 Ribulose-phosphate binding barrel RD05_RS16660 IPR001754 Orotidine 5'-phosphate decarboxylase domain RD05_RS16660 IPR013785 Aldolase-type TIM barrel RD05_RS16660 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RD05_RS16660 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 RD05_RS16665 IPR023753 FAD/NAD(P)-binding domain RD05_RS16665 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS16670 IPR036945 Diacylglycerol kinase (DAGK) superfamily RD05_RS16670 IPR000829 DAGK family RD05_RS16670 IPR033718 Diacylglycerol kinase, prokaryotic RD05_RS16675 IPR017039 Virulence factor BrkB RD05_RS16675 IPR023679 Uncharacterised protein family UPF0761, bacterial RD05_RS16680 IPR036709 Autotransporter beta-domain superfamily RD05_RS16680 IPR004899 Pertactin, central region RD05_RS16680 IPR003991 Pertactin virulence factor family RD05_RS16680 IPR006315 Outer membrane autotransporter barrel RD05_RS16680 IPR005546 Autotransporter beta-domain RD05_RS16680 IPR012332 P22 tailspike-like, C-terminal domain superfamily RD05_RS16680 IPR011050 Pectin lyase fold/virulence factor RD05_RS16685 IPR018370 Chaperonin Cpn60, conserved site RD05_RS16685 IPR027409 GroEL-like apical domain superfamily RD05_RS16685 IPR001844 Chaperonin Cpn60 RD05_RS16685 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RD05_RS16685 IPR002423 Chaperonin Cpn60/TCP-1 family RD05_RS16685 IPR027413 GroEL-like equatorial domain superfamily RD05_RS16690 IPR037124 GroES chaperonin superfamily RD05_RS16690 IPR020818 GroES chaperonin family RD05_RS16690 IPR018369 Chaperonin GroES, conserved site RD05_RS16690 IPR011032 GroES-like superfamily RD05_RS16710 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RD05_RS16710 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS16710 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RD05_RS16720 IPR000847 Transcription regulator HTH, LysR RD05_RS16720 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16720 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16720 IPR005119 LysR, substrate-binding RD05_RS16725 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RD05_RS16725 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RD05_RS16725 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS16745 IPR012292 Globin/Protoglobin RD05_RS16745 IPR039435 Diguanylate cyclase DosC, globin sensor domain RD05_RS16745 IPR000160 GGDEF domain RD05_RS16745 IPR029787 Nucleotide cyclase RD05_RS16745 IPR009050 Globin-like superfamily RD05_RS16750 IPR037522 HD-GYP domain RD05_RS16750 IPR011006 CheY-like superfamily RD05_RS16750 IPR001789 Signal transduction response regulator, receiver domain RD05_RS16750 IPR003607 HD/PDEase domain RD05_RS16780 IPR024775 DinB-like domain RD05_RS16780 IPR034660 DinB/YfiT-like putative metalloenzymes RD05_RS16780 IPR017806 Ergothioneine biosynthesis protein EgtB RD05_RS16780 IPR042095 Sulfatase-modifying factor enzyme superfamily RD05_RS16780 IPR005532 Sulfatase-modifying factor enzyme RD05_RS16780 IPR032890 Hercynine oxygenase, Actinobacteria RD05_RS16780 IPR016187 C-type lectin fold RD05_RS16785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS16785 IPR035094 Histidine N-alpha-methyltransferase RD05_RS16785 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type RD05_RS16785 IPR019257 Histidine-specific methyltransferase, SAM-dependent RD05_RS16785 IPR017804 Methyltransferase EgtD-like RD05_RS16795 IPR025202 Phospholipase D-like domain RD05_RS16795 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS16795 IPR030874 Cardiolipin synthase, Firmicutes-type RD05_RS16795 IPR027379 Cardiolipin synthase N-terminal RD05_RS16795 IPR022924 Cardiolipin synthase RD05_RS16805 IPR027283 Glutamate synthase large subunit-like protein, bacteria RD05_RS16805 IPR013785 Aldolase-type TIM barrel RD05_RS16805 IPR002932 Glutamate synthase domain RD05_RS16805 IPR024188 Glutamate synthase large subunit-like protein RD05_RS16810 IPR007272 Sulphur transport domain RD05_RS16815 IPR004776 Membrane transport protein RD05_RS16820 IPR016181 Acyl-CoA N-acyltransferase RD05_RS16820 IPR039143 Glucosamine 6-phosphate N-acetyltransferase RD05_RS16820 IPR000182 GNAT domain RD05_RS16840 IPR011129 Cold shock domain RD05_RS16840 IPR011805 Ribonuclease R RD05_RS16840 IPR022966 Ribonuclease II/R, conserved site RD05_RS16840 IPR013668 Ribonuclease R winged-helix domain RD05_RS16840 IPR012340 Nucleic acid-binding, OB-fold RD05_RS16840 IPR013223 Ribonuclease B, N-terminal OB domain RD05_RS16840 IPR022967 RNA-binding domain, S1 RD05_RS16840 IPR003029 S1 domain RD05_RS16840 IPR001900 Ribonuclease II/R RD05_RS16840 IPR040476 RNase II/RNase R, cold shock domain RD05_RS16840 IPR004476 Ribonuclease II/ribonuclease R RD05_RS16845 IPR029064 50S ribosomal protein L30e-like RD05_RS16845 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RD05_RS16845 IPR029028 Alpha/beta knot methyltransferases RD05_RS16845 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD05_RS16845 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS16845 IPR004441 RNA methyltransferase TrmH family RD05_RS16845 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RD05_RS16850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS16850 IPR006237 L-methionine gamma-lyase RD05_RS16850 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS16850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS16850 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD05_RS16855 IPR005123 Oxoglutarate/iron-dependent dioxygenase RD05_RS16855 IPR041097 PKHD-type hydroxylase C-terminal domain RD05_RS16855 IPR023550 PKHD-type hydroxylase RD05_RS16855 IPR006620 Prolyl 4-hydroxylase, alpha subunit RD05_RS16860 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RD05_RS16860 IPR000119 Histone-like DNA-binding protein RD05_RS16860 IPR020816 Histone-like DNA-binding protein, conserved site RD05_RS16875 IPR002898 MotA/TolQ/ExbB proton channel RD05_RS16880 IPR003400 Biopolymer transport protein ExbD/TolR RD05_RS16885 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16885 IPR001789 Signal transduction response regulator, receiver domain RD05_RS16885 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS16885 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS16885 IPR011006 CheY-like superfamily RD05_RS16885 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS16890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS16890 IPR013727 Two-component sensor kinase, N-terminal RD05_RS16890 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS16890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS16890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS16890 IPR005467 Histidine kinase domain RD05_RS16890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS16895 IPR023051 Potassium uptake protein, low affinity, Kup RD05_RS16895 IPR003855 Potassium transporter RD05_RS16900 IPR001518 Argininosuccinate synthase RD05_RS16900 IPR023437 Argininosuccinate synthase, type 2 subfamily RD05_RS16900 IPR018223 Argininosuccinate synthase, conserved site RD05_RS16900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS16900 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail RD05_RS16900 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RD05_RS16905 IPR024904 Ornithine carbamoyltransferase RD05_RS16905 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD05_RS16905 IPR006130 Aspartate/ornithine carbamoyltransferase RD05_RS16905 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RD05_RS16905 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD05_RS16905 IPR002292 Ornithine/putrescine carbamoyltransferase RD05_RS16910 IPR004636 Acetylornithine/Succinylornithine transaminase family RD05_RS16910 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS16910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS16910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS16910 IPR005814 Aminotransferase class-III RD05_RS16920 IPR000847 Transcription regulator HTH, LysR RD05_RS16920 IPR005119 LysR, substrate-binding RD05_RS16920 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16920 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16925 IPR036291 NAD(P)-binding domain superfamily RD05_RS16925 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS16930 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD05_RS16930 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS16930 IPR036291 NAD(P)-binding domain superfamily RD05_RS16935 IPR005064 Bordetella uptake gene RD05_RS16935 IPR042100 Bordetella uptake gene, domain 1 RD05_RS16950 IPR000524 Transcription regulator HTH, GntR RD05_RS16950 IPR011711 GntR, C-terminal RD05_RS16950 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16950 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS16950 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS16960 IPR036259 MFS transporter superfamily RD05_RS16960 IPR020846 Major facilitator superfamily domain RD05_RS16960 IPR011701 Major facilitator superfamily RD05_RS16970 IPR029032 AhpD-like RD05_RS16970 IPR004674 Alkylhydroperoxidase AhpD RD05_RS16970 IPR004675 Alkylhydroperoxidase AhpD core RD05_RS16970 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS16975 IPR024706 Peroxiredoxin, AhpC-type RD05_RS16975 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS16975 IPR036249 Thioredoxin-like superfamily RD05_RS16975 IPR013766 Thioredoxin domain RD05_RS16980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS16980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS16980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS16980 IPR003660 HAMP domain RD05_RS16980 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS16980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS16980 IPR005467 Histidine kinase domain RD05_RS16990 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS16990 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS16990 IPR001789 Signal transduction response regulator, receiver domain RD05_RS16990 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS16990 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS16990 IPR011006 CheY-like superfamily RD05_RS16995 IPR000905 Gcp-like domain RD05_RS16995 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB RD05_RS17000 IPR005122 Uracil-DNA glycosylase-like RD05_RS17000 IPR005273 Uracil-DNA glycosylase family 4 RD05_RS17000 IPR036895 Uracil-DNA glycosylase-like domain superfamily RD05_RS17005 IPR023727 Lysophospholipid transporter LplT RD05_RS17005 IPR011701 Major facilitator superfamily RD05_RS17005 IPR036259 MFS transporter superfamily RD05_RS17010 IPR024704 Structural maintenance of chromosomes protein RD05_RS17010 IPR003395 RecF/RecN/SMC, N-terminal RD05_RS17010 IPR036277 SMCs flexible hinge superfamily RD05_RS17010 IPR011890 Structural maintenance of chromosomes protein, prokaryotic RD05_RS17010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17010 IPR010935 SMCs flexible hinge RD05_RS17020 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD05_RS17020 IPR012340 Nucleic acid-binding, OB-fold RD05_RS17020 IPR004150 NAD-dependent DNA ligase, OB-fold RD05_RS17020 IPR010994 RuvA domain 2-like RD05_RS17020 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RD05_RS17020 IPR013840 NAD-dependent DNA ligase, N-terminal RD05_RS17020 IPR013839 NAD-dependent DNA ligase, adenylation RD05_RS17020 IPR001679 NAD-dependent DNA ligase RD05_RS17020 IPR033136 NAD-dependent DNA ligase, conserved site RD05_RS17020 IPR041663 DisA/LigA, helix-hairpin-helix motif RD05_RS17020 IPR036420 BRCT domain superfamily RD05_RS17020 IPR001357 BRCT domain RD05_RS17020 IPR018239 NAD-dependent DNA ligase, active site RD05_RS17025 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD05_RS17025 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RD05_RS17035 IPR006008 Intracellular septation protein A RD05_RS17040 IPR011057 Mss4-like superfamily RD05_RS17040 IPR002579 Peptide methionine sulphoxide reductase MrsB RD05_RS17040 IPR028427 Peptide methionine sulfoxide reductase RD05_RS17045 IPR003593 AAA+ ATPase domain RD05_RS17045 IPR017871 ABC transporter, conserved site RD05_RS17045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17045 IPR003439 ABC transporter-like RD05_RS17050 IPR003339 ABC/ECF transporter, transmembrane component RD05_RS17055 IPR003784 BioY protein RD05_RS17070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17070 IPR003593 AAA+ ATPase domain RD05_RS17070 IPR003439 ABC transporter-like RD05_RS17070 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS17070 IPR017871 ABC transporter, conserved site RD05_RS17075 IPR001544 Aminotransferase class IV RD05_RS17075 IPR018300 Aminotransferase, class IV, conserved site RD05_RS17075 IPR033939 Branched-chain aminotransferase RD05_RS17075 IPR005785 Branched-chain amino acid aminotransferase I RD05_RS17075 IPR036038 Aminotransferase-like, PLP-dependent enzymes RD05_RS17090 IPR001851 ABC transporter, permease RD05_RS17100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17100 IPR003593 AAA+ ATPase domain RD05_RS17100 IPR017871 ABC transporter, conserved site RD05_RS17100 IPR003439 ABC transporter-like RD05_RS17100 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS17105 IPR003439 ABC transporter-like RD05_RS17105 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS17105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17105 IPR017871 ABC transporter, conserved site RD05_RS17105 IPR003593 AAA+ ATPase domain RD05_RS17110 IPR000445 Helix-hairpin-helix motif RD05_RS17110 IPR011257 DNA glycosylase RD05_RS17110 IPR004036 Endonuclease III-like, conserved site-2 RD05_RS17110 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RD05_RS17110 IPR004035 Endonuclease III, iron-sulphur binding site RD05_RS17110 IPR003265 HhH-GPD domain RD05_RS17110 IPR005759 Endonuclease III RD05_RS17110 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD05_RS17115 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB RD05_RS17115 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS17115 IPR007202 4Fe-4S domain RD05_RS17115 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS17115 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria RD05_RS17125 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS17125 IPR033892 Ferredoxin--NADP reductase, bacteria RD05_RS17125 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS17125 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS17125 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS17125 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS17125 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS17130 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS17130 IPR022569 Ferredoxin, C-terminal RD05_RS17130 IPR000813 7Fe ferredoxin RD05_RS17130 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS17135 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase RD05_RS17135 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain RD05_RS17135 IPR006406 Nicotinate phosphoribosyltransferase RD05_RS17135 IPR007229 Nicotinate phosphoribosyltransferase family RD05_RS17135 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal RD05_RS17140 IPR035709 RutC family, YoaB-like RD05_RS17140 IPR006175 YjgF/YER057c/UK114 family RD05_RS17140 IPR035959 RutC-like superfamily RD05_RS17140 IPR019897 RidA, conserved site RD05_RS17150 IPR042252 MtfA, N-terminal RD05_RS17150 IPR024079 Metallopeptidase, catalytic domain superfamily RD05_RS17150 IPR010384 MtfA family RD05_RS17155 IPR012675 Beta-grasp domain superfamily RD05_RS17155 IPR003607 HD/PDEase domain RD05_RS17155 IPR004811 RelA/SpoT family RD05_RS17155 IPR002912 ACT domain RD05_RS17155 IPR007685 RelA/SpoT RD05_RS17155 IPR004095 TGS RD05_RS17155 IPR012676 TGS-like RD05_RS17155 IPR033655 RelA, TGS domain RD05_RS17160 IPR011650 Peptidase M20, dimerisation domain RD05_RS17160 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS17160 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD05_RS17160 IPR010169 Acetylornithine deacetylase ArgE RD05_RS17160 IPR002933 Peptidase M20 RD05_RS17165 IPR006654 Tryptophan synthase, beta chain RD05_RS17165 IPR006653 Tryptophan synthase, beta chain, conserved site RD05_RS17165 IPR001926 Pyridoxal-phosphate dependent enzyme RD05_RS17165 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS17165 IPR023026 Tryptophan synthase beta chain/beta chain-like RD05_RS17170 IPR013785 Aldolase-type TIM barrel RD05_RS17170 IPR011060 Ribulose-phosphate binding barrel RD05_RS17170 IPR018204 Tryptophan synthase, alpha chain, active site RD05_RS17170 IPR002028 Tryptophan synthase, alpha chain RD05_RS17175 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS17175 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RD05_RS17175 IPR034733 Acetyl-CoA carboxylase RD05_RS17175 IPR041010 Acetyl-coA carboxylase zinc finger domain RD05_RS17175 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RD05_RS17180 IPR018550 Lipid A 3-O-deacylase-related RD05_RS17180 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel RD05_RS17195 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RD05_RS17195 IPR003029 S1 domain RD05_RS17195 IPR028878 Ribonuclease E RD05_RS17195 IPR022967 RNA-binding domain, S1 RD05_RS17195 IPR004659 Ribonuclease E/G RD05_RS17195 IPR012340 Nucleic acid-binding, OB-fold RD05_RS17195 IPR021968 Polyribonucleotide phosphorylase C-terminal RD05_RS17200 IPR006145 Pseudouridine synthase, RsuA/RluA RD05_RS17200 IPR002942 RNA-binding S4 domain RD05_RS17200 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RD05_RS17200 IPR036986 RNA-binding S4 domain superfamily RD05_RS17200 IPR006225 Pseudouridine synthase, RluC/RluD RD05_RS17200 IPR020103 Pseudouridine synthase, catalytic domain superfamily RD05_RS17205 IPR036412 HAD-like superfamily RD05_RS17205 IPR006439 HAD hydrolase, subfamily IA RD05_RS17205 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RD05_RS17205 IPR041492 Haloacid dehalogenase-like hydrolase RD05_RS17205 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RD05_RS17205 IPR023214 HAD superfamily RD05_RS17205 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RD05_RS17205 IPR037512 Phosphoglycolate phosphatase, prokaryotic RD05_RS17210 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily RD05_RS17210 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS17210 IPR000572 Oxidoreductase, molybdopterin-binding domain RD05_RS17210 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP RD05_RS17215 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ RD05_RS17215 IPR013130 Ferric reductase transmembrane component-like domain RD05_RS17225 IPR023606 CoA-transferase family III domain superfamily RD05_RS17225 IPR003673 CoA-transferase family III RD05_RS17230 IPR000847 Transcription regulator HTH, LysR RD05_RS17230 IPR005119 LysR, substrate-binding RD05_RS17230 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17230 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain RD05_RS17230 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17240 IPR026347 Mesaconyl-CoA isomerase RD05_RS17240 IPR003673 CoA-transferase family III RD05_RS17240 IPR023606 CoA-transferase family III domain superfamily RD05_RS17260 IPR005119 LysR, substrate-binding RD05_RS17260 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17260 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17260 IPR000847 Transcription regulator HTH, LysR RD05_RS17265 IPR035959 RutC-like superfamily RD05_RS17265 IPR006175 YjgF/YER057c/UK114 family RD05_RS17265 IPR038743 YjgH-like RD05_RS17270 IPR000971 Globin RD05_RS17270 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS17270 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS17270 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS17270 IPR001834 NADH:cytochrome b5 reductase-like RD05_RS17270 IPR009050 Globin-like superfamily RD05_RS17270 IPR023950 Flavohemoprotein RD05_RS17270 IPR012292 Globin/Protoglobin RD05_RS17270 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS17270 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS17275 IPR006161 Conserved hypothetical protein CHP00336 RD05_RS17275 IPR006160 Short chain fatty acid transporter AtoE RD05_RS17280 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS17280 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS17280 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS17280 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS17280 IPR015590 Aldehyde dehydrogenase domain RD05_RS17280 IPR005932 1-pyrroline-5-carboxylate dehydrogenase RD05_RS17280 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS17285 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS17285 IPR011711 GntR, C-terminal RD05_RS17285 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17285 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17285 IPR000524 Transcription regulator HTH, GntR RD05_RS17295 IPR002059 Cold-shock protein, DNA-binding RD05_RS17295 IPR011129 Cold shock domain RD05_RS17295 IPR012156 Cold shock, CspA RD05_RS17295 IPR012340 Nucleic acid-binding, OB-fold RD05_RS17295 IPR019844 Cold-shock (CSD) domain RD05_RS17300 IPR005119 LysR, substrate-binding RD05_RS17300 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17300 IPR000847 Transcription regulator HTH, LysR RD05_RS17300 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain RD05_RS17300 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17320 IPR016039 Thiolase-like RD05_RS17320 IPR020616 Thiolase, N-terminal RD05_RS17320 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS17320 IPR020610 Thiolase, active site RD05_RS17320 IPR002155 Thiolase RD05_RS17320 IPR020613 Thiolase, conserved site RD05_RS17320 IPR020617 Thiolase, C-terminal RD05_RS17330 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS17330 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS17330 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS17330 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS17330 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS17330 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS17335 IPR005119 LysR, substrate-binding RD05_RS17335 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17335 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17335 IPR037412 HTH-type transcriptional regulator IlvR, PBP2 domain RD05_RS17335 IPR000847 Transcription regulator HTH, LysR RD05_RS17340 IPR005064 Bordetella uptake gene RD05_RS17340 IPR042100 Bordetella uptake gene, domain 1 RD05_RS17345 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS17345 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS17345 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS17345 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS17350 IPR023606 CoA-transferase family III domain superfamily RD05_RS17350 IPR003673 CoA-transferase family III RD05_RS17355 IPR016169 FAD-binding, type PCMH, subdomain 2 RD05_RS17355 IPR005170 Transporter-associated domain RD05_RS17355 IPR005496 Integral membrane protein TerC RD05_RS17355 IPR000644 CBS domain RD05_RS17355 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS17360 IPR003416 MgtC/SapB/SrpB/YhiD family RD05_RS17365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17365 IPR004540 Translation elongation factor EFG/EF2 RD05_RS17365 IPR000640 Elongation factor EFG, domain V-like RD05_RS17365 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS17365 IPR000795 Transcription factor, GTP-binding domain RD05_RS17365 IPR005225 Small GTP-binding protein domain RD05_RS17365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS17365 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS17365 IPR035649 EFG, domain V RD05_RS17365 IPR035647 EF-G domain III/V-like RD05_RS17365 IPR009022 Elongation factor G, domain III RD05_RS17365 IPR041095 Elongation Factor G, domain II RD05_RS17365 IPR004161 Translation elongation factor EFTu-like, domain 2 RD05_RS17365 IPR005517 Translation elongation factor EFG/EF2, domain IV RD05_RS17370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS17370 IPR004839 Aminotransferase, class I/classII RD05_RS17370 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS17370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS17370 IPR000524 Transcription regulator HTH, GntR RD05_RS17370 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17370 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17380 IPR006016 UspA RD05_RS17380 IPR006015 Universal stress protein A family RD05_RS17385 IPR041095 Elongation Factor G, domain II RD05_RS17385 IPR035647 EF-G domain III/V-like RD05_RS17385 IPR009022 Elongation factor G, domain III RD05_RS17385 IPR000640 Elongation factor EFG, domain V-like RD05_RS17385 IPR004540 Translation elongation factor EFG/EF2 RD05_RS17385 IPR000795 Transcription factor, GTP-binding domain RD05_RS17385 IPR005225 Small GTP-binding protein domain RD05_RS17385 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS17385 IPR005517 Translation elongation factor EFG/EF2, domain IV RD05_RS17385 IPR035649 EFG, domain V RD05_RS17385 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS17385 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17385 IPR031157 Tr-type G domain, conserved site RD05_RS17385 IPR004161 Translation elongation factor EFTu-like, domain 2 RD05_RS17385 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS17395 IPR001036 Acriflavin resistance protein RD05_RS17395 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS17400 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain RD05_RS17400 IPR013520 Exonuclease, RNase T/DNA polymerase III RD05_RS17400 IPR012337 Ribonuclease H-like superfamily RD05_RS17400 IPR006309 DNA polymerase 3, epsilon subunit RD05_RS17400 IPR036397 Ribonuclease H superfamily RD05_RS17415 IPR006160 Short chain fatty acid transporter AtoE RD05_RS17415 IPR006161 Conserved hypothetical protein CHP00336 RD05_RS17425 IPR004445 Sodium/glutamate symport carrier protein GltS RD05_RS17440 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS17440 IPR001173 Glycosyltransferase 2-like RD05_RS17445 IPR038731 Glycosyltransferase RgtA/B/C/D-like RD05_RS17460 IPR022742 Serine aminopeptidase, S33 RD05_RS17460 IPR029058 Alpha/Beta hydrolase fold RD05_RS17465 IPR001123 Amino acid exporter protein, LeuE-type RD05_RS17470 IPR000620 EamA domain RD05_RS17480 IPR005064 Bordetella uptake gene RD05_RS17480 IPR042100 Bordetella uptake gene, domain 1 RD05_RS17490 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS17490 IPR042100 Bordetella uptake gene, domain 1 RD05_RS17490 IPR005064 Bordetella uptake gene RD05_RS17500 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17500 IPR005119 LysR, substrate-binding RD05_RS17500 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17500 IPR000847 Transcription regulator HTH, LysR RD05_RS17500 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain RD05_RS17505 IPR000399 TPP-binding enzyme, conserved site RD05_RS17505 IPR039368 Acetolactate synthase large subunit, TPP binding domain RD05_RS17505 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS17505 IPR029061 Thiamin diphosphate-binding fold RD05_RS17505 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS17505 IPR029035 DHS-like NAD/FAD-binding domain superfamily RD05_RS17505 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS17505 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS17510 IPR023606 CoA-transferase family III domain superfamily RD05_RS17510 IPR003673 CoA-transferase family III RD05_RS17515 IPR012799 Fatty oxidation complex, alpha subunit FadB RD05_RS17515 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS17515 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS17515 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS17515 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS17515 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS17515 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS17515 IPR036291 NAD(P)-binding domain superfamily RD05_RS17515 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD05_RS17520 IPR042100 Bordetella uptake gene, domain 1 RD05_RS17520 IPR005064 Bordetella uptake gene RD05_RS17530 IPR005982 Thioredoxin reductase RD05_RS17530 IPR023753 FAD/NAD(P)-binding domain RD05_RS17530 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS17530 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD05_RS17535 IPR029016 GAF-like domain superfamily RD05_RS17535 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17535 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17535 IPR005471 Transcription regulator IclR, N-terminal RD05_RS17535 IPR014757 Transcription regulator IclR, C-terminal RD05_RS17555 IPR003673 CoA-transferase family III RD05_RS17555 IPR023606 CoA-transferase family III domain superfamily RD05_RS17560 IPR005064 Bordetella uptake gene RD05_RS17560 IPR042100 Bordetella uptake gene, domain 1 RD05_RS17565 IPR003673 CoA-transferase family III RD05_RS17565 IPR017659 Formyl-CoA:oxalate CoA-transferase RD05_RS17565 IPR023606 CoA-transferase family III domain superfamily RD05_RS17585 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17585 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RD05_RS17585 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily RD05_RS17585 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RD05_RS17585 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RD05_RS17585 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RD05_RS17585 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RD05_RS17590 IPR000878 Tetrapyrrole methylase RD05_RS17590 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RD05_RS17590 IPR008189 rRNA small subunit methyltransferase I RD05_RS17590 IPR035996 Tetrapyrrole methylase superfamily RD05_RS17590 IPR014777 Tetrapyrrole methylase, subdomain 1 RD05_RS17590 IPR014776 Tetrapyrrole methylase, subdomain 2 RD05_RS17595 IPR003509 Uncharacterised protein family UPF0102 RD05_RS17595 IPR011856 tRNA endonuclease-like domain superfamily RD05_RS17595 IPR011335 Restriction endonuclease type II-like RD05_RS17600 IPR035461 GmhA/DiaA RD05_RS17600 IPR001347 Sugar isomerase (SIS) RD05_RS17600 IPR004515 Phosphoheptose isomerase RD05_RS17605 IPR007055 BON domain RD05_RS17605 IPR014004 Transport-associated and nodulation domain, bacteria RD05_RS17610 IPR013766 Thioredoxin domain RD05_RS17610 IPR036249 Thioredoxin-like superfamily RD05_RS17610 IPR023555 Thiol-disulphide oxidoreductase ResA RD05_RS17610 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS17615 IPR004872 Lipoprotein NlpA family RD05_RS17620 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS17620 IPR037528 Acetylglutamate kinase ArgB RD05_RS17620 IPR004662 Acetylglutamate kinase family RD05_RS17620 IPR036393 Acetylglutamate kinase-like superfamily RD05_RS17620 IPR001057 Glutamate/acetylglutamate kinase RD05_RS17620 IPR041727 N-Acetyl-L-glutamate kinase, cyclic RD05_RS17630 IPR023769 Nucleoid occlusion factor SlmA RD05_RS17630 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS17630 IPR009057 Homeobox-like domain superfamily RD05_RS17630 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RD05_RS17635 IPR030676 Citrate carrier CitT-related RD05_RS17635 IPR001898 Solute carrier family 13 RD05_RS17640 IPR003767 Malate/L-lactate dehydrogenase-like RD05_RS17640 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily RD05_RS17645 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA RD05_RS17645 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB RD05_RS17645 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RD05_RS17650 IPR036138 Penicillin-binding protein, dimerisation domain superfamily RD05_RS17650 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS17650 IPR005311 Penicillin-binding protein, dimerisation domain RD05_RS17650 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS17650 IPR017790 Penicillin-binding protein 2 RD05_RS17660 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 RD05_RS17660 IPR007221 Rod shape-determining protein MreC RD05_RS17660 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 RD05_RS17665 IPR004753 Cell shape determining protein MreB RD05_RS17670 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C RD05_RS17670 IPR003837 Glu-tRNAGln amidotransferase C subunit RD05_RS17675 IPR000120 Amidase RD05_RS17675 IPR020556 Amidase, conserved site RD05_RS17675 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS17675 IPR036928 Amidase signature (AS) superfamily RD05_RS17675 IPR023631 Amidase signature domain RD05_RS17680 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RD05_RS17680 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RD05_RS17680 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RD05_RS17680 IPR018027 Asn/Gln amidotransferase RD05_RS17680 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like RD05_RS17680 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 RD05_RS17680 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 RD05_RS17680 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RD05_RS17680 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RD05_RS17685 IPR000836 Phosphoribosyltransferase domain RD05_RS17685 IPR004467 Orotate phosphoribosyl transferase domain RD05_RS17685 IPR023031 Orotate phosphoribosyltransferase RD05_RS17685 IPR029057 Phosphoribosyltransferase-like RD05_RS17690 IPR004808 AP endonuclease 1 RD05_RS17690 IPR005135 Endonuclease/exonuclease/phosphatase RD05_RS17690 IPR020847 AP endonuclease 1, binding site RD05_RS17690 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RD05_RS17690 IPR020848 AP endonuclease 1, conserved site RD05_RS17695 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RD05_RS17695 IPR033524 Leu/Phe/Val dehydrogenases active site RD05_RS17695 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RD05_RS17695 IPR014362 Glutamate dehydrogenase RD05_RS17695 IPR036291 NAD(P)-binding domain superfamily RD05_RS17695 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RD05_RS17695 IPR033922 NAD(P) binding domain of glutamate dehydrogenase RD05_RS17700 IPR005115 Uncharacterised domain UPF0126 RD05_RS17725 IPR036010 2Fe-2S ferredoxin-like superfamily RD05_RS17725 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RD05_RS17725 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS17725 IPR017927 FAD-binding domain, ferredoxin reductase-type RD05_RS17725 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RD05_RS17725 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS17725 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RD05_RS17725 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS17725 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS17725 IPR012675 Beta-grasp domain superfamily RD05_RS17735 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS17735 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS17735 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS17735 IPR015590 Aldehyde dehydrogenase domain RD05_RS17735 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS17735 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS17755 IPR000485 AsnC-type HTH domain RD05_RS17755 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS17755 IPR011711 GntR, C-terminal RD05_RS17755 IPR000524 Transcription regulator HTH, GntR RD05_RS17755 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17755 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS17765 IPR003462 Ornithine cyclodeaminase/mu-crystallin RD05_RS17765 IPR036291 NAD(P)-binding domain superfamily RD05_RS17765 IPR023401 Ornithine cyclodeaminase, N-terminal RD05_RS17790 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17790 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD05_RS17790 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS17790 IPR014284 RNA polymerase sigma-70 like domain RD05_RS17790 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS17790 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS17790 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS17790 IPR039425 RNA polymerase sigma-70 like RD05_RS17795 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD05_RS17795 IPR032623 FecR, N-terminal RD05_RS17795 IPR006860 FecR protein RD05_RS17800 IPR006970 PT repeat RD05_RS17800 IPR039426 Vitamin B12 transporter BtuB-like RD05_RS17800 IPR012910 TonB-dependent receptor, plug domain RD05_RS17800 IPR037066 TonB-dependent receptor, plug domain superfamily RD05_RS17800 IPR000531 TonB-dependent receptor-like, beta-barrel RD05_RS17800 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RD05_RS17800 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily RD05_RS17800 IPR010917 TonB-dependent receptor, conserved site RD05_RS17805 IPR007845 Haemin-degrading HemS/ChuX domain RD05_RS17810 IPR002491 ABC transporter periplasmic binding domain RD05_RS17815 IPR037294 ABC transporter, BtuC-like RD05_RS17815 IPR000522 ABC transporter, permease protein, BtuC-like RD05_RS17820 IPR003593 AAA+ ATPase domain RD05_RS17820 IPR003439 ABC transporter-like RD05_RS17820 IPR017871 ABC transporter, conserved site RD05_RS17820 IPR015863 ABC transporter, hemin import, HmuV RD05_RS17820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17825 IPR007553 Domain of unknown function DUF523 RD05_RS17830 IPR018655 Protein of unknown function DUF2086 RD05_RS17835 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RD05_RS17835 IPR004574 Alkylated DNA repair protein AlkB RD05_RS17835 IPR005123 Oxoglutarate/iron-dependent dioxygenase RD05_RS17835 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily RD05_RS17840 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS17840 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RD05_RS17840 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RD05_RS17840 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily RD05_RS17840 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RD05_RS17840 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RD05_RS17840 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RD05_RS17845 IPR001633 EAL domain RD05_RS17845 IPR005330 MHYT domain RD05_RS17845 IPR000160 GGDEF domain RD05_RS17845 IPR035919 EAL domain superfamily RD05_RS17845 IPR029787 Nucleotide cyclase RD05_RS17870 IPR042100 Bordetella uptake gene, domain 1 RD05_RS17870 IPR005064 Bordetella uptake gene RD05_RS17875 IPR013471 Ribonuclease Z/BN RD05_RS17875 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RD05_RS17875 IPR001279 Metallo-beta-lactamase RD05_RS17890 IPR005064 Bordetella uptake gene RD05_RS17890 IPR042100 Bordetella uptake gene, domain 1 RD05_RS17895 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS17895 IPR020845 AMP-binding, conserved site RD05_RS17895 IPR042099 AMP-dependent synthetase-like superfamily RD05_RS17895 IPR000873 AMP-dependent synthetase/ligase RD05_RS17895 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC RD05_RS17910 IPR023346 Lysozyme-like domain superfamily RD05_RS17910 IPR001264 Glycosyl transferase, family 51 RD05_RS17910 IPR036950 Penicillin binding protein transglycosylase domain RD05_RS17910 IPR011812 Biosynthetic peptidoglycan transglycosylase RD05_RS17920 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) RD05_RS17920 IPR029052 Metallo-dependent phosphatase-like RD05_RS17920 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RD05_RS17925 IPR002123 Phospholipid/glycerol acyltransferase RD05_RS17925 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase RD05_RS17930 IPR032466 Metal-dependent hydrolase RD05_RS17930 IPR011059 Metal-dependent hydrolase, composite domain superfamily RD05_RS17930 IPR004722 Dihydroorotase RD05_RS17930 IPR006680 Amidohydrolase-related RD05_RS17935 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD05_RS17935 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD05_RS17935 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RD05_RS17935 IPR002082 Aspartate carbamoyltransferase RD05_RS17935 IPR006130 Aspartate/ornithine carbamoyltransferase RD05_RS17940 IPR005227 Putative pre-16S rRNA nuclease RD05_RS17940 IPR006641 YqgF/RNase H-like domain RD05_RS17940 IPR037027 YqgF/RNase H-like domain superfamily RD05_RS17940 IPR012337 Ribonuclease H-like superfamily RD05_RS17945 IPR003774 Protein of unknown function UPF0301 RD05_RS17950 IPR024935 Rubredoxin domain RD05_RS17950 IPR024934 Rubredoxin-like domain RD05_RS17950 IPR024922 Rubredoxin RD05_RS17950 IPR018527 Rubredoxin, iron-binding site RD05_RS17955 IPR029056 Ribokinase-like RD05_RS17955 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD05_RS17955 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RD05_RS17960 IPR036206 Thiamin phosphate synthase superfamily RD05_RS17960 IPR022998 Thiamine phosphate synthase/TenI RD05_RS17960 IPR013785 Aldolase-type TIM barrel RD05_RS17960 IPR034291 Thiamine phosphate synthase RD05_RS17965 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS17965 IPR005814 Aminotransferase class-III RD05_RS17965 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RD05_RS17965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS17965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS17985 IPR025110 AMP-binding enzyme, C-terminal domain RD05_RS17985 IPR011957 Benzoate-CoA ligase family RD05_RS17985 IPR000873 AMP-dependent synthetase/ligase RD05_RS17990 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS17990 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS17990 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS17990 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS17990 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS17990 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RD05_RS17990 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS17995 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS17995 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RD05_RS17995 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS17995 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS18010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18010 IPR003593 AAA+ ATPase domain RD05_RS18010 IPR003439 ABC transporter-like RD05_RS18010 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RD05_RS18010 IPR017871 ABC transporter, conserved site RD05_RS18015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18015 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RD05_RS18015 IPR017871 ABC transporter, conserved site RD05_RS18015 IPR003439 ABC transporter-like RD05_RS18015 IPR003593 AAA+ ATPase domain RD05_RS18020 IPR001851 ABC transporter, permease RD05_RS18020 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RD05_RS18025 IPR001851 ABC transporter, permease RD05_RS18035 IPR013094 Alpha/beta hydrolase fold-3 RD05_RS18035 IPR029058 Alpha/Beta hydrolase fold RD05_RS18065 IPR036412 HAD-like superfamily RD05_RS18065 IPR010708 5'(3')-deoxyribonucleotidase RD05_RS18065 IPR023214 HAD superfamily RD05_RS18075 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18075 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS18075 IPR005119 LysR, substrate-binding RD05_RS18075 IPR000847 Transcription regulator HTH, LysR RD05_RS18080 IPR011701 Major facilitator superfamily RD05_RS18080 IPR020846 Major facilitator superfamily domain RD05_RS18080 IPR036259 MFS transporter superfamily RD05_RS18085 IPR004404 Dihydroxy-acid dehydratase RD05_RS18085 IPR042096 Dihydroxy-acid dehydratase, C-terminal RD05_RS18085 IPR037237 IlvD/EDD, N-terminal domain RD05_RS18085 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RD05_RS18085 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RD05_RS18090 IPR018060 DNA binding HTH domain, AraC-type RD05_RS18090 IPR018062 HTH domain AraC-type, conserved site RD05_RS18090 IPR009057 Homeobox-like domain superfamily RD05_RS18095 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RD05_RS18095 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RD05_RS18095 IPR013785 Aldolase-type TIM barrel RD05_RS18095 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily RD05_RS18095 IPR000891 Pyruvate carboxyltransferase RD05_RS18095 IPR039371 LeuA, N-terminal catalytic TIM barrel domain RD05_RS18095 IPR005668 2-isopropylmalate synthase RD05_RS18105 IPR033140 Lipase, GDXG, putative serine active site RD05_RS18105 IPR002168 Lipase, GDXG, putative histidine active site RD05_RS18105 IPR023508 Acetyl esterase RD05_RS18105 IPR029058 Alpha/Beta hydrolase fold RD05_RS18105 IPR013094 Alpha/beta hydrolase fold-3 RD05_RS18110 IPR000914 Solute-binding protein family 5 domain RD05_RS18110 IPR023765 Solute-binding protein family 5, conserved site RD05_RS18110 IPR039424 Solute-binding protein family 5 RD05_RS18110 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS18115 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD05_RS18115 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS18115 IPR036291 NAD(P)-binding domain superfamily RD05_RS18115 IPR023514 Glyoxylate/hydroxypyruvate reductase A RD05_RS18120 IPR012349 FMN-binding split barrel RD05_RS18120 IPR007396 Transcriptional regulator PAI 2-type RD05_RS18130 IPR036034 PDZ superfamily RD05_RS18130 IPR001940 Peptidase S1C RD05_RS18130 IPR009003 Peptidase S1, PA clan RD05_RS18130 IPR011782 Peptidase S1C, Do RD05_RS18130 IPR001478 PDZ domain RD05_RS18135 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RD05_RS18135 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily RD05_RS18140 IPR001185 Large-conductance mechanosensitive channel RD05_RS18140 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L RD05_RS18140 IPR036019 Gated mechanosensitive channel RD05_RS18145 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RD05_RS18145 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS18145 IPR014349 Rieske iron-sulphur protein RD05_RS18145 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit RD05_RS18145 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal RD05_RS18145 IPR005805 Rieske iron-sulphur protein, C-terminal RD05_RS18150 IPR030689 Cytochrome b RD05_RS18150 IPR016174 Di-haem cytochrome, transmembrane RD05_RS18150 IPR005798 Cytochrome b/b6, C-terminal RD05_RS18150 IPR036150 Cytochrome b/b6, C-terminal domain superfamily RD05_RS18150 IPR005797 Cytochrome b/b6, N-terminal RD05_RS18150 IPR027387 Cytochrome b/b6-like domain superfamily RD05_RS18155 IPR036909 Cytochrome c-like domain superfamily RD05_RS18155 IPR009056 Cytochrome c-like domain RD05_RS18155 IPR002326 Cytochrome c1 RD05_RS18160 IPR040079 Glutathione Transferase family RD05_RS18160 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RD05_RS18160 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS18160 IPR004045 Glutathione S-transferase, N-terminal RD05_RS18160 IPR004046 Glutathione S-transferase, C-terminal RD05_RS18160 IPR034341 Stringent starvation protein A, N-terminal RD05_RS18160 IPR036249 Thioredoxin-like superfamily RD05_RS18165 IPR036760 SspB-like superfamily RD05_RS18165 IPR007481 Stringent starvation protein B RD05_RS18190 IPR023614 Porin domain superfamily RD05_RS18190 IPR033900 Porin domain, Gram-negative type RD05_RS18190 IPR002299 Porin, Neisseria sp. type RD05_RS18190 IPR001702 Porin, Gram-negative type RD05_RS18205 IPR029057 Phosphoribosyltransferase-like RD05_RS18205 IPR000836 Phosphoribosyltransferase domain RD05_RS18205 IPR005764 Adenine phosphoribosyl transferase RD05_RS18210 IPR003439 ABC transporter-like RD05_RS18210 IPR003593 AAA+ ATPase domain RD05_RS18210 IPR036640 ABC transporter type 1, transmembrane domain superfamily RD05_RS18210 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC RD05_RS18210 IPR017871 ABC transporter, conserved site RD05_RS18210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18210 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS18215 IPR039421 Type I protein exporter RD05_RS18215 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18215 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RD05_RS18215 IPR017871 ABC transporter, conserved site RD05_RS18215 IPR003439 ABC transporter-like RD05_RS18215 IPR036640 ABC transporter type 1, transmembrane domain superfamily RD05_RS18215 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS18215 IPR003593 AAA+ ATPase domain RD05_RS18220 IPR011724 Cyd operon protein YbgT RD05_RS18220 IPR012994 Membrane bound YbgT-like RD05_RS18225 IPR003317 Cytochrome ubiquinol oxidase subunit 2 RD05_RS18230 IPR002585 Cytochrome ubiquinol oxidase subunit 1 RD05_RS18250 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS18250 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS18250 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RD05_RS18250 IPR034184 Putative acyl-CoA dehydrogenase AidB RD05_RS18250 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS18250 IPR041504 Adaptive response protein AidB, N-terminal RD05_RS18250 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RD05_RS18255 IPR042100 Bordetella uptake gene, domain 1 RD05_RS18255 IPR005064 Bordetella uptake gene RD05_RS18260 IPR003673 CoA-transferase family III RD05_RS18260 IPR023606 CoA-transferase family III domain superfamily RD05_RS18265 IPR000101 Gamma-glutamyltranspeptidase RD05_RS18265 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS18270 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18270 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS18270 IPR005119 LysR, substrate-binding RD05_RS18270 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain RD05_RS18270 IPR000847 Transcription regulator HTH, LysR RD05_RS18275 IPR005064 Bordetella uptake gene RD05_RS18275 IPR042100 Bordetella uptake gene, domain 1 RD05_RS18285 IPR020557 Fumarate lyase, conserved site RD05_RS18285 IPR018951 Fumarase C, C-terminal RD05_RS18285 IPR024083 Fumarase/histidase, N-terminal RD05_RS18285 IPR005677 Fumarate hydratase, class II RD05_RS18285 IPR022761 Fumarate lyase, N-terminal RD05_RS18285 IPR008948 L-Aspartase-like RD05_RS18285 IPR000362 Fumarate lyase family RD05_RS18290 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RD05_RS18290 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18295 IPR021731 AMIN domain RD05_RS18295 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain RD05_RS18295 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS18300 IPR032816 SNARE associated Golgi protein RD05_RS18300 IPR032818 DedA family RD05_RS18305 IPR042120 MutL, C-terminal domain, dimerisation subdomain RD05_RS18305 IPR014790 MutL, C-terminal, dimerisation RD05_RS18305 IPR014762 DNA mismatch repair, conserved site RD05_RS18305 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms RD05_RS18305 IPR020667 DNA mismatch repair protein, MutL RD05_RS18305 IPR002099 DNA mismatch repair protein family, N-terminal RD05_RS18305 IPR037198 MutL, C-terminal domain superfamily RD05_RS18305 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS18305 IPR013507 DNA mismatch repair protein, S5 domain 2-like RD05_RS18305 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS18305 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS18305 IPR042121 MutL, C-terminal domain, regulatory subdomain RD05_RS18310 IPR039657 Dimethylallyltransferase RD05_RS18310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18310 IPR018022 IPP transferase RD05_RS18315 IPR010918 PurM-like, C-terminal domain RD05_RS18315 IPR036676 PurM-like, C-terminal domain superfamily RD05_RS18315 IPR036921 PurM-like, N-terminal domain superfamily RD05_RS18315 IPR016188 PurM-like, N-terminal domain RD05_RS18315 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RD05_RS18320 IPR020591 Chromosomal replication control, initiator DnaA-like RD05_RS18320 IPR013317 Chromosomal replication initiator protein DnaA RD05_RS18320 IPR017788 DnaA regulatory inactivator Hda RD05_RS18320 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae RD05_RS18320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18325 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like RD05_RS18325 IPR036412 HAD-like superfamily RD05_RS18325 IPR023214 HAD superfamily RD05_RS18330 IPR025866 Polymerase A arginine-rich C-terminal domain RD05_RS18330 IPR002646 Poly A polymerase, head domain RD05_RS18330 IPR010206 Poly(A) polymerase I RD05_RS18330 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RD05_RS18335 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily RD05_RS18335 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RD05_RS18340 IPR005064 Bordetella uptake gene RD05_RS18340 IPR042100 Bordetella uptake gene, domain 1 RD05_RS18350 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS18350 IPR004681 TRAP transporter large membrane protein DctM RD05_RS18355 IPR006311 Twin-arginine translocation pathway, signal sequence RD05_RS18355 IPR038404 TRAP transporter solute receptor DctP superfamily RD05_RS18355 IPR018389 TRAP transporter solute receptor DctP/TeaA RD05_RS18355 IPR026289 Solute binding protein, TakP-like RD05_RS18355 IPR041721 Lactate-binding periplasmic protein TTHA0766 RD05_RS18360 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RD05_RS18360 IPR011663 UbiC transcription regulator-associated RD05_RS18360 IPR000524 Transcription regulator HTH, GntR RD05_RS18360 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18360 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS18365 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS18365 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RD05_RS18365 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS18365 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS18365 IPR030876 3-sulfolactaldehyde reductase RD05_RS18365 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD05_RS18365 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD05_RS18365 IPR036291 NAD(P)-binding domain superfamily RD05_RS18370 IPR029032 AhpD-like RD05_RS18370 IPR012788 4-carboxymuconolactone decarboxylase RD05_RS18370 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS18380 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS18380 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS18380 IPR036291 NAD(P)-binding domain superfamily RD05_RS18380 IPR011294 3-hydroxybutyrate dehydrogenase RD05_RS18400 IPR019043 Restriction endonuclease, type II, HindIII RD05_RS18400 IPR038373 Restriction endonuclease, type II, HindIII superfamily RD05_RS18405 IPR005791 Protein translocase subunit SecD RD05_RS18405 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD05_RS18405 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD05_RS18405 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD05_RS18410 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B RD05_RS18410 IPR038521 ThiC/Bza superfamily RD05_RS18410 IPR025747 ThiC-associated domain RD05_RS18410 IPR037509 Phosphomethylpyrimidine synthase RD05_RS18415 IPR015590 Aldehyde dehydrogenase domain RD05_RS18415 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS18415 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS18415 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS18415 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS18415 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS18420 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS18420 IPR004113 FAD-linked oxidase, C-terminal RD05_RS18420 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS18420 IPR036318 FAD-binding, type PCMH-like superfamily RD05_RS18420 IPR016166 FAD-binding domain, PCMH-type RD05_RS18420 IPR006094 FAD linked oxidase, N-terminal RD05_RS18435 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RD05_RS18435 IPR011217 Streptogramin lyase RD05_RS18435 IPR011042 Six-bladed beta-propeller, TolB-like RD05_RS18440 IPR000182 GNAT domain RD05_RS18440 IPR016181 Acyl-CoA N-acyltransferase RD05_RS18445 IPR018317 Queuosine biosynthesis protein QueC RD05_RS18445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS18450 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site RD05_RS18450 IPR021135 Phosphoenolpyruvate carboxylase RD05_RS18450 IPR033129 Phosphoenolpyruvate carboxylase, His active site RD05_RS18450 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RD05_RS18450 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type RD05_RS18455 IPR005546 Autotransporter beta-domain RD05_RS18455 IPR036709 Autotransporter beta-domain superfamily RD05_RS18455 IPR000209 Peptidase S8/S53 domain RD05_RS18455 IPR023828 Peptidase S8, subtilisin, Ser-active site RD05_RS18455 IPR015500 Peptidase S8, subtilisin-related RD05_RS18455 IPR034061 Autotransporter serine protease peptidase domain RD05_RS18455 IPR036852 Peptidase S8/S53 domain superfamily RD05_RS18460 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS18460 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS18460 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD05_RS18460 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS18460 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RD05_RS18460 IPR036291 NAD(P)-binding domain superfamily RD05_RS18460 IPR022694 3-hydroxyacyl-CoA dehydrogenase RD05_RS18460 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD05_RS18465 IPR006160 Short chain fatty acid transporter AtoE RD05_RS18465 IPR006161 Conserved hypothetical protein CHP00336 RD05_RS18470 IPR011283 Acetoacetyl-CoA reductase RD05_RS18470 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS18470 IPR036291 NAD(P)-binding domain superfamily RD05_RS18470 IPR002347 Short-chain dehydrogenase/reductase SDR RD05_RS18475 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RD05_RS18475 IPR014757 Transcription regulator IclR, C-terminal RD05_RS18475 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18475 IPR029016 GAF-like domain superfamily RD05_RS18475 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS18475 IPR005471 Transcription regulator IclR, N-terminal RD05_RS18480 IPR012792 3-oxoacid CoA-transferase, subunit A RD05_RS18480 IPR004165 Coenzyme A transferase family I RD05_RS18480 IPR037171 NagB/RpiA transferase-like RD05_RS18480 IPR004163 Coenzyme A transferase binding site RD05_RS18485 IPR004165 Coenzyme A transferase family I RD05_RS18485 IPR004164 Coenzyme A transferase active site RD05_RS18485 IPR037171 NagB/RpiA transferase-like RD05_RS18485 IPR012791 3-oxoacid CoA-transferase, subunit B RD05_RS18490 IPR026029 Muconolactone isomerase domain RD05_RS18490 IPR003464 Muconolactone delta-isomerase RD05_RS18490 IPR011008 Dimeric alpha-beta barrel RD05_RS18500 IPR026968 3-oxoadipate enol-lactonase 1/2 RD05_RS18500 IPR022742 Serine aminopeptidase, S33 RD05_RS18500 IPR029058 Alpha/Beta hydrolase fold RD05_RS18500 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS18520 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS18520 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS18520 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS18530 IPR003673 CoA-transferase family III RD05_RS18530 IPR023606 CoA-transferase family III domain superfamily RD05_RS18535 IPR011711 GntR, C-terminal RD05_RS18535 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18535 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS18535 IPR000524 Transcription regulator HTH, GntR RD05_RS18535 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS18540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS18540 IPR003437 Glycine dehydrogenase (decarboxylating) RD05_RS18540 IPR020581 Glycine cleavage system P protein RD05_RS18540 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS18540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS18545 IPR011053 Single hybrid motif RD05_RS18545 IPR017453 Glycine cleavage system H-protein, subgroup RD05_RS18545 IPR033753 Glycine cleavage system H-protein/Simiate RD05_RS18545 IPR002930 Glycine cleavage system H-protein RD05_RS18545 IPR000089 Biotin/lipoyl attachment RD05_RS18545 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS18550 IPR028896 Aminomethyltransferase-like RD05_RS18550 IPR022903 Glycine cleavage system T protein, bacteria RD05_RS18550 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RD05_RS18550 IPR006222 Aminomethyltransferase, folate-binding domain RD05_RS18550 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD05_RS18550 IPR006223 Glycine cleavage system T protein RD05_RS18550 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RD05_RS18555 IPR003689 Zinc/iron permease RD05_RS18560 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily RD05_RS18560 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily RD05_RS18560 IPR019831 Manganese/iron superoxide dismutase, N-terminal RD05_RS18560 IPR019833 Manganese/iron superoxide dismutase, binding site RD05_RS18560 IPR001189 Manganese/iron superoxide dismutase RD05_RS18560 IPR019832 Manganese/iron superoxide dismutase, C-terminal RD05_RS18570 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS18570 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like RD05_RS18570 IPR023166 HI0933-like insert domain superfamily RD05_RS18575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS18575 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS18575 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS18575 IPR011193 Ornithine/lysine/arginine decarboxylase RD05_RS18575 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily RD05_RS18575 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal RD05_RS18575 IPR000310 Orn/Lys/Arg decarboxylase, major domain RD05_RS18575 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal RD05_RS18600 IPR029054 dUTPase-like RD05_RS18600 IPR036157 dUTPase-like superfamily RD05_RS18600 IPR011962 dCTP deaminase RD05_RS18600 IPR033704 dUTPase, trimeric RD05_RS18615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18615 IPR000808 Mrp, conserved site RD05_RS18615 IPR019591 Mrp/NBP35 ATP-binding protein RD05_RS18615 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 RD05_RS18625 IPR023458 Methionine-tRNA ligase, type 1 RD05_RS18625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS18625 IPR015413 Methionyl/Leucyl tRNA synthetase RD05_RS18625 IPR033911 Methioninyl-tRNA synthetase core domain RD05_RS18625 IPR029038 Methionyl-tRNA synthetase, Zn-domain RD05_RS18625 IPR012340 Nucleic acid-binding, OB-fold RD05_RS18625 IPR002547 tRNA-binding domain RD05_RS18625 IPR014758 Methionyl-tRNA synthetase RD05_RS18625 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RD05_RS18625 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain RD05_RS18625 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS18625 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal RD05_RS18630 IPR001763 Rhodanese-like domain RD05_RS18630 IPR036873 Rhodanese-like domain superfamily RD05_RS18630 IPR020936 Uncharacterised protein family UPF0176 RD05_RS18630 IPR040503 UPF0176, acylphosphatase-like domain RD05_RS18655 IPR002024 Bacterioferritin RD05_RS18655 IPR012347 Ferritin-like RD05_RS18655 IPR009040 Ferritin-like diiron domain RD05_RS18655 IPR008331 Ferritin/DPS protein domain RD05_RS18655 IPR009078 Ferritin-like superfamily RD05_RS18665 IPR004548 Peptide chain release factor 3 RD05_RS18665 IPR035647 EF-G domain III/V-like RD05_RS18665 IPR004161 Translation elongation factor EFTu-like, domain 2 RD05_RS18665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18665 IPR009000 Translation protein, beta-barrel domain superfamily RD05_RS18665 IPR031157 Tr-type G domain, conserved site RD05_RS18665 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily RD05_RS18665 IPR041732 Peptide chain release factor 3, GTP-binding domain RD05_RS18665 IPR005225 Small GTP-binding protein domain RD05_RS18665 IPR000795 Transcription factor, GTP-binding domain RD05_RS18665 IPR032090 Peptide chain release factor 3, C-terminal RD05_RS18670 IPR001123 Amino acid exporter protein, LeuE-type RD05_RS18675 IPR014014 RNA helicase, DEAD-box type, Q motif RD05_RS18675 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RD05_RS18675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18675 IPR001650 Helicase, C-terminal RD05_RS18675 IPR014001 Helicase superfamily 1/2, ATP-binding domain RD05_RS18675 IPR011545 DEAD/DEAH box helicase domain RD05_RS18675 IPR028622 ATP-dependent RNA helicase RhlE RD05_RS18685 IPR007621 TPM domain RD05_RS18690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18690 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS18690 IPR017871 ABC transporter, conserved site RD05_RS18690 IPR003439 ABC transporter-like RD05_RS18690 IPR003593 AAA+ ATPase domain RD05_RS18705 IPR004147 UbiB domain RD05_RS18705 IPR011009 Protein kinase-like domain superfamily RD05_RS18705 IPR000719 Protein kinase domain RD05_RS18705 IPR010232 Probable protein kinase UbiB RD05_RS18720 IPR004033 UbiE/COQ5 methyltransferase RD05_RS18720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS18720 IPR023576 UbiE/COQ5 methyltransferase, conserved site RD05_RS18725 IPR011006 CheY-like superfamily RD05_RS18725 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18725 IPR001789 Signal transduction response regulator, receiver domain RD05_RS18725 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB RD05_RS18725 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS18725 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS18730 IPR000014 PAS domain RD05_RS18730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS18730 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS18730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS18730 IPR035965 PAS domain superfamily RD05_RS18730 IPR013767 PAS fold RD05_RS18730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS18730 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR RD05_RS18730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS18730 IPR005467 Histidine kinase domain RD05_RS18730 IPR021766 Phosphate regulon sensor protein PhoR RD05_RS18735 IPR001789 Signal transduction response regulator, receiver domain RD05_RS18735 IPR011006 CheY-like superfamily RD05_RS18735 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS18735 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18735 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS18735 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response RD05_RS18740 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS18740 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS18740 IPR003660 HAMP domain RD05_RS18740 IPR006290 Heavy metal sensor kinase RD05_RS18740 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS18740 IPR005467 Histidine kinase domain RD05_RS18740 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS18740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS18750 IPR002912 ACT domain RD05_RS18750 IPR036291 NAD(P)-binding domain superfamily RD05_RS18750 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS18750 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD05_RS18750 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD05_RS18750 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD05_RS18755 IPR005119 LysR, substrate-binding RD05_RS18755 IPR000847 Transcription regulator HTH, LysR RD05_RS18755 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18755 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS18765 IPR003833 Carboxyltransferase domain, subdomain C and D RD05_RS18765 IPR029000 Cyclophilin-like domain superfamily RD05_RS18765 IPR010016 KipI family RD05_RS18770 IPR029000 Cyclophilin-like domain superfamily RD05_RS18770 IPR003778 Carboxyltransferase domain, subdomain A and B RD05_RS18775 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS18775 IPR005501 LamB/YcsF/PxpA-like RD05_RS18785 IPR005064 Bordetella uptake gene RD05_RS18785 IPR042100 Bordetella uptake gene, domain 1 RD05_RS18790 IPR002938 FAD-binding domain RD05_RS18790 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS18795 IPR002938 FAD-binding domain RD05_RS18795 IPR017631 Salicylate 1-monooxygenase RD05_RS18795 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS18800 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS18800 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS18810 IPR003673 CoA-transferase family III RD05_RS18810 IPR023606 CoA-transferase family III domain superfamily RD05_RS18815 IPR011711 GntR, C-terminal RD05_RS18815 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS18815 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS18815 IPR000485 AsnC-type HTH domain RD05_RS18815 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18815 IPR000524 Transcription regulator HTH, GntR RD05_RS18830 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RD05_RS18830 IPR001721 Threonine dehydratase, ACT-like domain RD05_RS18830 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS18830 IPR005787 Threonine dehydratase, biosynthetic RD05_RS18830 IPR038110 Threonine dehydratase, ACT-like domain superfamily RD05_RS18830 IPR001926 Pyridoxal-phosphate dependent enzyme RD05_RS18835 IPR033900 Porin domain, Gram-negative type RD05_RS18835 IPR023614 Porin domain superfamily RD05_RS18835 IPR001702 Porin, Gram-negative type RD05_RS18835 IPR002299 Porin, Neisseria sp. type RD05_RS18850 IPR036390 Winged helix DNA-binding domain superfamily RD05_RS18850 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS18850 IPR005119 LysR, substrate-binding RD05_RS18850 IPR000847 Transcription regulator HTH, LysR RD05_RS18860 IPR007634 RNA polymerase sigma factor 54, DNA-binding RD05_RS18860 IPR000394 RNA polymerase sigma factor 54 RD05_RS18860 IPR007046 RNA polymerase sigma factor 54, core-binding domain RD05_RS18860 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily RD05_RS18870 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RD05_RS18870 IPR013785 Aldolase-type TIM barrel RD05_RS18870 IPR000891 Pyruvate carboxyltransferase RD05_RS18870 IPR005668 2-isopropylmalate synthase RD05_RS18870 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily RD05_RS18870 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RD05_RS18870 IPR039371 LeuA, N-terminal catalytic TIM barrel domain RD05_RS18875 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS18875 IPR000120 Amidase RD05_RS18875 IPR036928 Amidase signature (AS) superfamily RD05_RS18875 IPR020556 Amidase, conserved site RD05_RS18875 IPR023631 Amidase signature domain RD05_RS18885 IPR023588 Transcription regulator HTH, PurR RD05_RS18885 IPR028082 Periplasmic binding protein-like I RD05_RS18885 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RD05_RS18885 IPR000843 LacI-type HTH domain RD05_RS18900 IPR035906 MetI-like superfamily RD05_RS18900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS18900 IPR011867 Molybdate ABC transporter, permease protein RD05_RS18905 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS18905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18905 IPR017871 ABC transporter, conserved site RD05_RS18905 IPR003439 ABC transporter-like RD05_RS18905 IPR024765 TOBE-like domain RD05_RS18905 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal RD05_RS18905 IPR003593 AAA+ ATPase domain RD05_RS18905 IPR005666 Sulphate transport system permease protein 1 RD05_RS18920 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RD05_RS18920 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD05_RS18920 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD05_RS18920 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RD05_RS18920 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD05_RS18920 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD05_RS18920 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RD05_RS18920 IPR036291 NAD(P)-binding domain superfamily RD05_RS18925 IPR036259 MFS transporter superfamily RD05_RS18925 IPR011701 Major facilitator superfamily RD05_RS18925 IPR020846 Major facilitator superfamily domain RD05_RS18930 IPR001451 Hexapeptide repeat RD05_RS18930 IPR018357 Hexapeptide transferase, conserved site RD05_RS18930 IPR025877 MobA-like NTP transferase RD05_RS18930 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS18930 IPR011004 Trimeric LpxA-like superfamily RD05_RS18930 IPR038009 GlmU, C-terminal LbH domain RD05_RS18930 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RD05_RS18950 IPR003782 Copper chaperone SCO1/SenC RD05_RS18950 IPR036249 Thioredoxin-like superfamily RD05_RS18955 IPR000537 UbiA prenyltransferase family RD05_RS18955 IPR006369 Protohaem IX farnesyltransferase RD05_RS18960 IPR023755 Heme A synthase, type 1 RD05_RS18960 IPR003780 COX15/CtaA family RD05_RS18980 IPR000298 Cytochrome c oxidase subunit III-like RD05_RS18980 IPR033945 Cytochrome c oxidase subunit III domain RD05_RS18980 IPR024791 Cytochrome c oxidase subunit III RD05_RS18980 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD05_RS18980 IPR035973 Cytochrome c oxidase subunit III-like superfamily RD05_RS18995 IPR023616 Cytochrome c oxidase-like, subunit I domain RD05_RS18995 IPR033944 Cytochrome c oxidase subunit I domain RD05_RS18995 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RD05_RS18995 IPR000883 Cytochrome c oxidase subunit I RD05_RS18995 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD05_RS18995 IPR014241 Cytochrome c oxidase, subunit I bacterial type RD05_RS19000 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily RD05_RS19000 IPR008972 Cupredoxin RD05_RS19000 IPR001505 Copper centre Cu(A) RD05_RS19000 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RD05_RS19000 IPR014222 Cytochrome c oxidase, subunit II RD05_RS19000 IPR002429 Cytochrome c oxidase subunit II-like C-terminal RD05_RS19010 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria RD05_RS19010 IPR038770 Sodium/solute symporter superfamily RD05_RS19010 IPR018422 Cation/H+ exchanger, CPA1 family RD05_RS19010 IPR006153 Cation/H+ exchanger RD05_RS19015 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RD05_RS19015 IPR029052 Metallo-dependent phosphatase-like RD05_RS19015 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RD05_RS19020 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RD05_RS19020 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS19020 IPR007630 RNA polymerase sigma-70 region 4 RD05_RS19020 IPR013324 RNA polymerase sigma factor, region 3/4-like RD05_RS19020 IPR009042 RNA polymerase sigma-70 region 1.2 RD05_RS19020 IPR000943 RNA polymerase sigma-70 RD05_RS19020 IPR014284 RNA polymerase sigma-70 like domain RD05_RS19020 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS19030 IPR029058 Alpha/Beta hydrolase fold RD05_RS19030 IPR000801 Putative esterase RD05_RS19030 IPR014186 S-formylglutathione hydrolase RD05_RS19035 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS19035 IPR014183 Alcohol dehydrogenase class III RD05_RS19035 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD05_RS19035 IPR036291 NAD(P)-binding domain superfamily RD05_RS19035 IPR013154 Alcohol dehydrogenase, N-terminal RD05_RS19035 IPR011032 GroES-like superfamily RD05_RS19045 IPR013785 Aldolase-type TIM barrel RD05_RS19045 IPR002489 Glutamate synthase, alpha subunit, C-terminal RD05_RS19045 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily RD05_RS19045 IPR006982 Glutamate synthase, central-N RD05_RS19045 IPR002932 Glutamate synthase domain RD05_RS19045 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS19045 IPR017932 Glutamine amidotransferase type 2 domain RD05_RS19050 IPR009051 Alpha-helical ferredoxin RD05_RS19050 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 RD05_RS19050 IPR023753 FAD/NAD(P)-binding domain RD05_RS19050 IPR036188 FAD/NAD(P)-binding domain superfamily RD05_RS19050 IPR028261 Dihydroprymidine dehydrogenase domain II RD05_RS19055 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel RD05_RS19055 IPR005618 Outer membrane protein, OmpW RD05_RS19060 IPR005064 Bordetella uptake gene RD05_RS19060 IPR042100 Bordetella uptake gene, domain 1 RD05_RS19065 IPR003593 AAA+ ATPase domain RD05_RS19065 IPR003439 ABC transporter-like RD05_RS19065 IPR017871 ABC transporter, conserved site RD05_RS19065 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl RD05_RS19065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19070 IPR030802 ABC transporter permease MalE RD05_RS19070 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RD05_RS19075 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD RD05_RS19075 IPR003399 Mce/MlaD RD05_RS19080 IPR007428 MlaA lipoprotein RD05_RS19090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19090 IPR003593 AAA+ ATPase domain RD05_RS19090 IPR017871 ABC transporter, conserved site RD05_RS19090 IPR003439 ABC transporter-like RD05_RS19095 IPR000412 ABC-2 transporter RD05_RS19095 IPR013525 ABC-2 type transporter RD05_RS19105 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RD05_RS19105 IPR036968 Enolpyruvate transferase domain superfamily RD05_RS19105 IPR001986 Enolpyruvate transferase domain RD05_RS19105 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RD05_RS19110 IPR024893 ATP phosphoribosyltransferase HisG, short form RD05_RS19110 IPR001348 ATP phosphoribosyltransferase HisG RD05_RS19110 IPR013820 ATP phosphoribosyltransferase, catalytic domain RD05_RS19110 IPR018198 ATP phosphoribosyltransferase, conserved site RD05_RS19115 IPR022695 Histidinol dehydrogenase, monofunctional RD05_RS19115 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS19115 IPR012131 Histidinol dehydrogenase RD05_RS19115 IPR001692 Histidinol dehydrogenase, conserved site RD05_RS19120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS19120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS19120 IPR005861 Histidinol-phosphate aminotransferase family RD05_RS19120 IPR004839 Aminotransferase, class I/classII RD05_RS19120 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS19125 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS19125 IPR000807 Imidazoleglycerol-phosphate dehydratase RD05_RS19125 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily RD05_RS19125 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RD05_RS19135 IPR013785 Aldolase-type TIM barrel RD05_RS19135 IPR011060 Ribulose-phosphate binding barrel RD05_RS19135 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RD05_RS19135 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA RD05_RS19135 IPR006062 Histidine biosynthesis RD05_RS19140 IPR013785 Aldolase-type TIM barrel RD05_RS19140 IPR004651 Histidine biosynthesis, HisF RD05_RS19140 IPR006062 Histidine biosynthesis RD05_RS19140 IPR011060 Ribulose-phosphate binding barrel RD05_RS19145 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily RD05_RS19145 IPR026660 Phosphoribosyl-AMP cyclohydrolase RD05_RS19145 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RD05_RS19150 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase RD05_RS19150 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like RD05_RS19155 IPR019808 Histidine triad, conserved site RD05_RS19155 IPR036265 HIT-like superfamily RD05_RS19155 IPR011146 HIT-like domain RD05_RS19155 IPR001310 Histidine triad (HIT) protein RD05_RS19160 IPR006312 Sec-independent protein translocase protein TatA/E RD05_RS19160 IPR003369 Sec-independent protein translocase protein TatA/B/E RD05_RS19165 IPR018448 Twin-arginine translocation protein TatB RD05_RS19165 IPR003369 Sec-independent protein translocase protein TatA/B/E RD05_RS19170 IPR002033 Sec-independent periplasmic protein translocase TatC RD05_RS19170 IPR019820 Sec-independent periplasmic protein translocase, conserved site RD05_RS19180 IPR005064 Bordetella uptake gene RD05_RS19180 IPR042100 Bordetella uptake gene, domain 1 RD05_RS19185 IPR003898 Bordetella pertussis toxin A RD05_RS19190 IPR008992 Enterotoxin RD05_RS19190 IPR016187 C-type lectin fold RD05_RS19190 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily RD05_RS19190 IPR005138 Aerolysin/Pertussis toxin domain RD05_RS19190 IPR003899 Bordetella pertussis toxin B RD05_RS19190 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD05_RS19195 IPR015355 Pertussis toxin, subunit S4 RD05_RS19195 IPR008992 Enterotoxin RD05_RS19200 IPR015356 Pertussis toxin, subunit S5 RD05_RS19200 IPR008992 Enterotoxin RD05_RS19205 IPR003899 Bordetella pertussis toxin B RD05_RS19205 IPR008992 Enterotoxin RD05_RS19205 IPR016187 C-type lectin fold RD05_RS19205 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily RD05_RS19205 IPR005138 Aerolysin/Pertussis toxin domain RD05_RS19205 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD05_RS19210 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RD05_RS19215 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RD05_RS19220 IPR004346 CagE, TrbE, VirB component of type IV transporter system RD05_RS19220 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RD05_RS19220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19225 IPR007688 Plasmid conjugal transfer TrbL/VirB6 RD05_RS19235 IPR026264 Type IV secretion system protein VirB8/PtlE RD05_RS19235 IPR007430 Bacterial virulence protein VirB8 RD05_RS19235 IPR032710 NTF2-like domain superfamily RD05_RS19240 IPR033645 VirB9/CagX/TrbG, C-terminal RD05_RS19240 IPR014148 P-type conjugative transfer protein VirB9 RD05_RS19240 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RD05_RS19240 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily RD05_RS19245 IPR042217 Type IV secretion system, VirB10/TrbI RD05_RS19245 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RD05_RS19250 IPR014155 Type IV secretion system protein VirB11 RD05_RS19250 IPR001482 Type II/IV secretion system protein RD05_RS19250 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS19250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19260 IPR000620 EamA domain RD05_RS19280 IPR027368 tRNA modification GTPase MnmE domain 2 RD05_RS19280 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD05_RS19280 IPR005225 Small GTP-binding protein domain RD05_RS19280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19280 IPR025867 MnmE, helical domain RD05_RS19280 IPR004520 tRNA modification GTPase MnmE RD05_RS19280 IPR006073 GTP binding domain RD05_RS19280 IPR018948 GTP-binding protein TrmE, N-terminal RD05_RS19280 IPR031168 TrmE-type guanine nucleotide-binding domain RD05_RS19285 IPR023765 Solute-binding protein family 5, conserved site RD05_RS19285 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS19285 IPR000914 Solute-binding protein family 5 domain RD05_RS19285 IPR039424 Solute-binding protein family 5 RD05_RS19290 IPR035906 MetI-like superfamily RD05_RS19290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS19295 IPR035906 MetI-like superfamily RD05_RS19295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS19295 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS19300 IPR003593 AAA+ ATPase domain RD05_RS19300 IPR017871 ABC transporter, conserved site RD05_RS19300 IPR003439 ABC transporter-like RD05_RS19300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19300 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS19310 IPR042195 ArgJ beta chain, C-terminal domain RD05_RS19310 IPR016117 ArgJ-like domain superfamily RD05_RS19310 IPR002813 Arginine biosynthesis protein ArgJ RD05_RS19320 IPR020476 NUDIX hydrolase RD05_RS19320 IPR015797 NUDIX hydrolase-like domain superfamily RD05_RS19320 IPR020084 NUDIX hydrolase, conserved site RD05_RS19320 IPR000086 NUDIX hydrolase domain RD05_RS19340 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD05_RS19340 IPR003423 Outer membrane efflux protein RD05_RS19345 IPR023931 Multidrug resistance protein MdtC RD05_RS19345 IPR001036 Acriflavin resistance protein RD05_RS19345 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS19350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS19350 IPR001036 Acriflavin resistance protein RD05_RS19350 IPR022831 Multidrug resistance protein MdtB RD05_RS19355 IPR006143 RND efflux pump, membrane fusion protein RD05_RS19355 IPR022824 Multidrug resistance protein MdtA RD05_RS19355 IPR039562 Membrane fusion protein, biotin-lipoyl like domain RD05_RS19360 IPR036268 ZapD domain superfamily RD05_RS19360 IPR027462 Z ring-associated protein D, C-terminal RD05_RS19360 IPR009777 Cell division protein ZapD RD05_RS19365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19365 IPR001977 Dephospho-CoA kinase RD05_RS19370 IPR014032 Peptidase A24A, prepilin type IV, bacterial RD05_RS19370 IPR010627 Peptidase A24A, N-terminal RD05_RS19370 IPR000045 Prepilin type IV endopeptidase, peptidase domain RD05_RS19385 IPR004821 Cytidyltransferase-like domain RD05_RS19385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS19385 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain RD05_RS19385 IPR003721 Pantoate-beta-alanine ligase RD05_RS19390 IPR003768 Segregation and condensation protein A RD05_RS19400 IPR020846 Major facilitator superfamily domain RD05_RS19400 IPR004638 Drug resistance transporter EmrB-like RD05_RS19400 IPR036259 MFS transporter superfamily RD05_RS19400 IPR011701 Major facilitator superfamily RD05_RS19405 IPR005999 Glycerol kinase RD05_RS19405 IPR018483 Carbohydrate kinase, FGGY, conserved site RD05_RS19405 IPR018485 Carbohydrate kinase, FGGY, C-terminal RD05_RS19405 IPR000577 Carbohydrate kinase, FGGY RD05_RS19405 IPR018484 Carbohydrate kinase, FGGY, N-terminal RD05_RS19415 IPR005064 Bordetella uptake gene RD05_RS19415 IPR042100 Bordetella uptake gene, domain 1 RD05_RS19420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19420 IPR017871 ABC transporter, conserved site RD05_RS19420 IPR003439 ABC transporter-like RD05_RS19420 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RD05_RS19420 IPR003593 AAA+ ATPase domain RD05_RS19425 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS19425 IPR035906 MetI-like superfamily RD05_RS19425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS19430 IPR035906 MetI-like superfamily RD05_RS19430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS19430 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RD05_RS19435 IPR018313 Solute-binding protein family 3, conserved site RD05_RS19435 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter RD05_RS19435 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RD05_RS19440 IPR003593 AAA+ ATPase domain RD05_RS19440 IPR003439 ABC transporter-like RD05_RS19440 IPR005286 Cell division protein FtsE, ATP-binding RD05_RS19440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19440 IPR017871 ABC transporter, conserved site RD05_RS19445 IPR004513 Cell division protein FtsX RD05_RS19445 IPR040690 FtsX, extracellular domain RD05_RS19450 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD05_RS19450 IPR038592 CheD-like superfamily RD05_RS19450 IPR005659 Chemoreceptor glutamine deamidase CheD RD05_RS19460 IPR005760 A/G-specific adenine glycosylase MutY RD05_RS19460 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD05_RS19460 IPR029119 MutY, C-terminal RD05_RS19460 IPR015797 NUDIX hydrolase-like domain superfamily RD05_RS19460 IPR004035 Endonuclease III, iron-sulphur binding site RD05_RS19460 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RD05_RS19460 IPR003265 HhH-GPD domain RD05_RS19460 IPR004036 Endonuclease III-like, conserved site-2 RD05_RS19460 IPR011257 DNA glycosylase RD05_RS19460 IPR000445 Helix-hairpin-helix motif RD05_RS19470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RD05_RS19470 IPR013216 Methyltransferase type 11 RD05_RS19480 IPR023606 CoA-transferase family III domain superfamily RD05_RS19480 IPR003673 CoA-transferase family III RD05_RS19485 IPR003673 CoA-transferase family III RD05_RS19485 IPR023606 CoA-transferase family III domain superfamily RD05_RS19495 IPR005064 Bordetella uptake gene RD05_RS19495 IPR042100 Bordetella uptake gene, domain 1 RD05_RS19500 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS19500 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS19500 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS19500 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS19505 IPR029479 Nitroreductase RD05_RS19505 IPR000415 Nitroreductase-like RD05_RS19515 IPR013785 Aldolase-type TIM barrel RD05_RS19515 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site RD05_RS19515 IPR000891 Pyruvate carboxyltransferase RD05_RS19520 IPR029045 ClpP/crotonase-like domain superfamily RD05_RS19520 IPR001753 Enoyl-CoA hydratase/isomerase RD05_RS19520 IPR014748 Enoyl-CoA hydratase, C-terminal RD05_RS19520 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS19525 IPR023606 CoA-transferase family III domain superfamily RD05_RS19525 IPR003673 CoA-transferase family III RD05_RS19530 IPR005064 Bordetella uptake gene RD05_RS19530 IPR042100 Bordetella uptake gene, domain 1 RD05_RS19540 IPR018028 Catalase, mono-functional, haem-containing RD05_RS19540 IPR040333 Catalase, clade 3 RD05_RS19540 IPR037060 Catalase core domain superfamily RD05_RS19540 IPR024708 Catalase active site RD05_RS19540 IPR020835 Catalase superfamily RD05_RS19540 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 RD05_RS19540 IPR002226 Catalase haem-binding site RD05_RS19540 IPR011614 Catalase core domain RD05_RS19540 IPR010582 Catalase immune-responsive domain RD05_RS19545 IPR035906 MetI-like superfamily RD05_RS19545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS19550 IPR003439 ABC transporter-like RD05_RS19550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19550 IPR015859 ABC transporter, taurine import, TauD RD05_RS19550 IPR017871 ABC transporter, conserved site RD05_RS19550 IPR003593 AAA+ ATPase domain RD05_RS19560 IPR003819 TauD/TfdA-like domain RD05_RS19560 IPR042098 Taurine dioxygenase TauD-like superfamily RD05_RS19560 IPR006189 CHASE domain RD05_RS19565 IPR036264 Bacterial exopeptidase dimerisation domain RD05_RS19565 IPR017439 Amidohydrolase RD05_RS19565 IPR002933 Peptidase M20 RD05_RS19565 IPR011650 Peptidase M20, dimerisation domain RD05_RS19570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS19570 IPR003593 AAA+ ATPase domain RD05_RS19570 IPR003439 ABC transporter-like RD05_RS19570 IPR017871 ABC transporter, conserved site RD05_RS19575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19575 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS19575 IPR017871 ABC transporter, conserved site RD05_RS19575 IPR003439 ABC transporter-like RD05_RS19575 IPR003593 AAA+ ATPase domain RD05_RS19580 IPR035906 MetI-like superfamily RD05_RS19580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS19580 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS19585 IPR035906 MetI-like superfamily RD05_RS19585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RD05_RS19590 IPR039424 Solute-binding protein family 5 RD05_RS19590 IPR030678 Peptide/nickel binding protein, MppA-type RD05_RS19590 IPR000914 Solute-binding protein family 5 domain RD05_RS19590 IPR023765 Solute-binding protein family 5, conserved site RD05_RS19595 IPR006073 GTP binding domain RD05_RS19595 IPR004520 tRNA modification GTPase MnmE RD05_RS19595 IPR027368 tRNA modification GTPase MnmE domain 2 RD05_RS19595 IPR025867 MnmE, helical domain RD05_RS19595 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19595 IPR031168 TrmE-type guanine nucleotide-binding domain RD05_RS19595 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD05_RS19595 IPR018948 GTP-binding protein TrmE, N-terminal RD05_RS19595 IPR005225 Small GTP-binding protein domain RD05_RS19605 IPR001789 Signal transduction response regulator, receiver domain RD05_RS19605 IPR036388 Winged helix-like DNA-binding domain superfamily RD05_RS19605 IPR039420 Transcriptional regulatory protein WalR-like RD05_RS19605 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS19605 IPR001867 OmpR/PhoB-type DNA-binding domain RD05_RS19605 IPR011006 CheY-like superfamily RD05_RS19610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS19610 IPR005467 Histidine kinase domain RD05_RS19610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RD05_RS19610 IPR003594 Histidine kinase/HSP90-like ATPase RD05_RS19610 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RD05_RS19610 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RD05_RS19610 IPR003660 HAMP domain RD05_RS19625 IPR002823 Protein of unknown function DUF112, transmembrane RD05_RS19630 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS19630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RD05_RS19630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RD05_RS19630 IPR004839 Aminotransferase, class I/classII RD05_RS19635 IPR012156 Cold shock, CspA RD05_RS19635 IPR002059 Cold-shock protein, DNA-binding RD05_RS19635 IPR011129 Cold shock domain RD05_RS19635 IPR012340 Nucleic acid-binding, OB-fold RD05_RS19635 IPR019844 Cold-shock (CSD) domain