RD05_RS00005 IPR002218 Glucose-inhibited division protein A-related RD05_RS00005 IPR004416 Glucose-inhibited division protein A RD05_RS00005 IPR020595 Glucose-inhibited division protein A-related, conserved site RD05_RS00005 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS00005 IPR026904 GidA associated domain 3 RD05_RS00010 IPR003682 rRNA small subunit methyltransferase G RD05_RS00010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS00015 IPR025669 AAA domain RD05_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00020 IPR000182 GNAT domain RD05_RS00020 IPR016181 Acyl-CoA N-acyltransferase RD05_RS00025 IPR003115 ParB/Sulfiredoxin RD05_RS00025 IPR004437 ParB/RepB/Spo0J partition protein family RD05_RS00030 IPR006034 Asparaginase/glutaminase RD05_RS00030 IPR020827 Asparaginase/glutaminase, active site 1 RD05_RS00030 IPR027473 L-asparaginase, C-terminal domain RD05_RS00030 IPR027474 L-asparaginase, N-terminal RD05_RS00030 IPR027475 Asparaginase/glutaminase, active site 2 RD05_RS00035 IPR006034 Asparaginase/glutaminase RD05_RS00035 IPR027473 L-asparaginase, C-terminal domain RD05_RS00055 IPR000795 Elongation factor, GTP-binding domain RD05_RS00055 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RD05_RS00055 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD05_RS00055 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RD05_RS00055 IPR005225 Small GTP-binding protein domain RD05_RS00055 IPR009000 Translation protein, beta-barrel domain RD05_RS00055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RD05_RS00055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00055 IPR031157 RD05_RS00055 RD05_RS00065 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RD05_RS00065 IPR005807 SecE subunit of protein translocation complex RD05_RS00065 IPR022943 Preprotein translocase subunit SecE RD05_RS00070 IPR001062 Transcription antitermination protein, NusG RD05_RS00070 IPR005824 KOW RD05_RS00070 IPR006645 NusG, N-terminal RD05_RS00070 IPR008991 Translation protein SH3-like domain RD05_RS00070 IPR014722 Ribosomal protein L2 domain 2 RD05_RS00070 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RD05_RS00075 IPR000911 Ribosomal protein L11/L12 RD05_RS00075 IPR006519 Ribosomal protein L11, bacterial-type RD05_RS00075 IPR020783 Ribosomal protein L11, C-terminal RD05_RS00075 IPR020784 Ribosomal protein L11, N-terminal RD05_RS00075 IPR020785 Ribosomal protein L11, conserved site RD05_RS00080 IPR002143 Ribosomal protein L1 RD05_RS00080 IPR005878 Ribosomal protein L1, bacterial-type RD05_RS00080 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich RD05_RS00080 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RD05_RS00080 IPR023673 Ribosomal protein L1, conserved site RD05_RS00080 IPR023674 Ribosomal protein L1-like RD05_RS00080 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RD05_RS00085 IPR001790 Ribosomal protein L10/acidic P0 RD05_RS00085 IPR002363 Ribosomal protein L10, eubacterial, conserved site RD05_RS00085 IPR022973 Ribosomal protein L10 RD05_RS00090 IPR000206 Ribosomal protein L7/L12 RD05_RS00090 IPR008932 Ribosomal protein L7/L12, oligomerisation RD05_RS00090 IPR013823 Ribosomal protein L7/L12, C-terminal RD05_RS00090 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RD05_RS00095 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 RD05_RS00095 IPR007121 RNA polymerase, beta subunit, conserved site RD05_RS00095 IPR007641 RNA polymerase Rpb2, domain 7 RD05_RS00095 IPR007642 RNA polymerase Rpb2, domain 2 RD05_RS00095 IPR007644 RNA polymerase, beta subunit, protrusion RD05_RS00095 IPR007645 RNA polymerase Rpb2, domain 3 RD05_RS00095 IPR010243 DNA-directed RNA polymerase, beta subunit RD05_RS00095 IPR014724 RNA polymerase Rpb2, OB-fold RD05_RS00095 IPR015712 DNA-directed RNA polymerase, subunit 2 RD05_RS00095 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RD05_RS00100 IPR000722 RNA polymerase, alpha subunit RD05_RS00100 IPR006592 RNA polymerase, N-terminal RD05_RS00100 IPR007066 RNA polymerase Rpb1, domain 3 RD05_RS00100 IPR007080 RNA polymerase Rpb1, domain 1 RD05_RS00100 IPR007081 RNA polymerase Rpb1, domain 5 RD05_RS00100 IPR007083 RNA polymerase Rpb1, domain 4 RD05_RS00100 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RD05_RS00110 IPR011009 Protein kinase-like domain RD05_RS00120 IPR006860 FecR protein RD05_RS00120 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 RD05_RS00120 IPR018392 LysM domain RD05_RS00130 IPR001789 Signal transduction response regulator, receiver domain RD05_RS00130 IPR001867 Signal transduction response regulator, C-terminal RD05_RS00130 IPR011006 CheY-like superfamily RD05_RS00130 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00130 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS00135 IPR001584 Integrase, catalytic core RD05_RS00135 IPR009057 Homeodomain-like RD05_RS00135 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00135 IPR012337 Ribonuclease H-like domain RD05_RS00135 IPR024967 DNA-binding domain, IS481-type RD05_RS00140 IPR003673 CoA-transferase family III RD05_RS00140 IPR023606 CoA-transferase family III domain RD05_RS00145 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD05_RS00145 IPR012340 Nucleic acid-binding, OB-fold RD05_RS00145 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD05_RS00150 IPR002155 Thiolase RD05_RS00150 IPR016039 Thiolase-like RD05_RS00150 IPR020616 Thiolase, N-terminal RD05_RS00155 IPR002539 MaoC-like domain RD05_RS00155 IPR029069 HotDog domain RD05_RS00160 IPR000847 Transcription regulator HTH, LysR RD05_RS00160 IPR005119 LysR, substrate-binding RD05_RS00160 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00165 IPR001753 Crotonase superfamily RD05_RS00165 IPR029045 ClpP/crotonase-like domain RD05_RS00170 IPR005656 MmgE/PrpD RD05_RS00175 IPR001584 Integrase, catalytic core RD05_RS00175 IPR009057 Homeodomain-like RD05_RS00175 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00175 IPR012337 Ribonuclease H-like domain RD05_RS00175 IPR024967 DNA-binding domain, IS481-type RD05_RS00180 IPR011701 Major facilitator superfamily RD05_RS00180 IPR020846 Major facilitator superfamily domain RD05_RS00185 IPR002310 Glycine-tRNA ligase, alpha subunit RD05_RS00190 IPR008909 DALR anticodon binding RD05_RS00190 IPR015944 Glycine-tRNA ligase, beta subunit RD05_RS00195 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase RD05_RS00195 IPR006543 Histidinol-phosphate phosphatase RD05_RS00195 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RD05_RS00195 IPR023214 HAD-like domain RD05_RS00200 IPR002123 Phospholipid/glycerol acyltransferase RD05_RS00205 IPR002725 Protein of unknown function DUF45 RD05_RS00210 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS00210 IPR004361 Glyoxalase I RD05_RS00210 IPR018146 Glyoxalase I, conserved site RD05_RS00210 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS00215 IPR000181 Formylmethionine deformylase RD05_RS00215 IPR023635 Peptide deformylase RD05_RS00225 IPR001584 Integrase, catalytic core RD05_RS00225 IPR009057 Homeodomain-like RD05_RS00225 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00225 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00225 IPR012337 Ribonuclease H-like domain RD05_RS00225 IPR024967 DNA-binding domain, IS481-type RD05_RS00240 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS00240 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00240 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS00245 IPR004776 Auxin efflux carrier RD05_RS00250 IPR003767 Malate/L-lactate dehydrogenase RD05_RS00255 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS00255 IPR008220 Homoserine acetyltransferase RD05_RS00255 IPR029058 Alpha/Beta hydrolase fold RD05_RS00260 IPR010743 Methionine biosynthesis MetW RD05_RS00260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS00265 IPR001584 Integrase, catalytic core RD05_RS00265 IPR009057 Homeodomain-like RD05_RS00265 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00265 IPR012337 Ribonuclease H-like domain RD05_RS00265 IPR024967 DNA-binding domain, IS481-type RD05_RS00270 IPR011701 Major facilitator superfamily RD05_RS00270 IPR020846 Major facilitator superfamily domain RD05_RS00280 IPR001920 Asp/Glu racemase RD05_RS00280 IPR004380 Aspartate racemase RD05_RS00280 IPR015942 Asp/Glu/hydantoin racemase RD05_RS00280 IPR018187 Asp/Glu racemase, active site RD05_RS00285 IPR003439 ABC transporter-like RD05_RS00285 IPR003593 AAA+ ATPase domain RD05_RS00285 IPR017871 ABC transporter, conserved site RD05_RS00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00285 IPR030206 RD05_RS00285 RD05_RS00290 IPR000515 MetI-like domain RD05_RS00290 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS00290 IPR030205 RD05_RS00290 RD05_RS00295 IPR000515 MetI-like domain RD05_RS00295 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS00295 IPR030202 RD05_RS00295 RD05_RS00300 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS00305 IPR001584 Integrase, catalytic core RD05_RS00305 IPR009057 Homeodomain-like RD05_RS00305 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00305 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00305 IPR012337 Ribonuclease H-like domain RD05_RS00305 IPR024967 DNA-binding domain, IS481-type RD05_RS00315 IPR012893 HipA-like, C-terminal RD05_RS00315 IPR012894 HipA, N-terminal subdomain 2 RD05_RS00315 IPR017508 HipA, N-terminal subdomain 1 RD05_RS00320 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00330 IPR005064 Bordetella uptake gene RD05_RS00335 IPR002818 ThiJ/PfpI RD05_RS00335 IPR006286 Peptidase C56, PfpI RD05_RS00335 IPR029062 Class I glutamine amidotransferase-like RD05_RS00340 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS00345 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS00345 IPR001221 Phenol hydroxylase reductase RD05_RS00345 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS00345 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS00345 IPR008333 Oxidoreductase, FAD-binding domain RD05_RS00345 IPR012675 Beta-grasp domain RD05_RS00345 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS00350 IPR004681 TRAP transporter permease protein RD05_RS00350 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS00360 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS00365 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD05_RS00365 IPR032710 RD05_RS00365 RD05_RS00370 IPR001584 Integrase, catalytic core RD05_RS00370 IPR009057 Homeodomain-like RD05_RS00370 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00370 IPR012337 Ribonuclease H-like domain RD05_RS00370 IPR024967 DNA-binding domain, IS481-type RD05_RS00375 IPR009534 Protein of unknown function DUF1153 RD05_RS00375 IPR010921 Trp repressor/replication initiator RD05_RS00375 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00380 IPR001584 Integrase, catalytic core RD05_RS00380 IPR012337 Ribonuclease H-like domain RD05_RS00390 IPR001404 Heat shock protein Hsp90 family RD05_RS00390 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS00390 IPR019805 Heat shock protein Hsp90, conserved site RD05_RS00390 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS00390 IPR020575 Heat shock protein Hsp90, N-terminal RD05_RS00395 IPR004045 Glutathione S-transferase, N-terminal RD05_RS00395 IPR004046 Glutathione S-transferase, C-terminal RD05_RS00395 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS00395 IPR012336 Thioredoxin-like fold RD05_RS00400 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RD05_RS00405 IPR001781 Zinc finger, LIM-type RD05_RS00410 IPR002541 Cytochrome c assembly protein RD05_RS00415 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD05_RS00415 IPR003593 AAA+ ATPase domain RD05_RS00415 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RD05_RS00415 IPR004780 Signal recognition particle protein Ffh RD05_RS00415 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RD05_RS00415 IPR022941 Signal recognition particle, SRP54 subunit RD05_RS00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00420 IPR001584 Integrase, catalytic core RD05_RS00420 IPR009057 Homeodomain-like RD05_RS00420 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00420 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00420 IPR012337 Ribonuclease H-like domain RD05_RS00420 IPR024967 DNA-binding domain, IS481-type RD05_RS00425 IPR001584 Integrase, catalytic core RD05_RS00425 IPR009057 Homeodomain-like RD05_RS00425 IPR012337 Ribonuclease H-like domain RD05_RS00425 IPR024967 DNA-binding domain, IS481-type RD05_RS00430 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RD05_RS00430 IPR016040 NAD(P)-binding domain RD05_RS00440 IPR021260 Protein of unknown function DUF2837 RD05_RS00445 IPR001296 Glycosyl transferase, family 1 RD05_RS00445 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS00450 IPR003362 Bacterial sugar transferase RD05_RS00455 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RD05_RS00455 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS00455 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS00455 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS00460 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS00465 IPR003331 UDP-N-acetylglucosamine 2-epimerase RD05_RS00465 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type RD05_RS00470 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RD05_RS00470 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS00470 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS00470 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS00475 IPR001451 Bacterial transferase hexapeptide repeat RD05_RS00475 IPR011004 Trimeric LpxA-like RD05_RS00480 IPR000683 Oxidoreductase, N-terminal RD05_RS00480 IPR004104 Oxidoreductase, C-terminal RD05_RS00480 IPR016040 NAD(P)-binding domain RD05_RS00485 IPR002201 Glycosyl transferase, family 9 RD05_RS00485 IPR011908 Lipopolysaccharide heptosyltransferase I RD05_RS00490 IPR001296 Glycosyl transferase, family 1 RD05_RS00490 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RD05_RS00500 IPR004619 Type III pantothenate kinase RD05_RS00505 IPR003142 Biotin protein ligase, C-terminal RD05_RS00505 IPR004143 Biotin/lipoate A/B protein ligase RD05_RS00505 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RD05_RS00505 IPR008988 Transcriptional repressor, C-terminal RD05_RS00510 IPR003453 Permease domain RD05_RS00510 IPR030802 RD05_RS00510 RD05_RS00515 IPR003439 ABC transporter-like RD05_RS00515 IPR003593 AAA+ ATPase domain RD05_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00530 IPR005586 Protein of unknown function DUF330 RD05_RS00535 IPR029058 Alpha/Beta hydrolase fold RD05_RS00540 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RD05_RS00540 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS00540 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RD05_RS00540 IPR015956 Penicillin-binding protein-associated RD05_RS00540 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RD05_RS00545 IPR001544 Aminotransferase, class IV RD05_RS00550 IPR007454 Uncharacterised protein family UPF0250 RD05_RS00550 IPR027471 YbeD-like domain RD05_RS00555 IPR000544 Octanoyltransferase RD05_RS00555 IPR004143 Biotin/lipoate A/B protein ligase RD05_RS00555 IPR020605 Octanoyltransferase, conserved site RD05_RS00560 IPR003698 Lipoyl synthase RD05_RS00560 IPR006638 Elongator protein 3/MiaB/NifB RD05_RS00560 IPR007197 Radical SAM RD05_RS00560 IPR013785 Aldolase-type TIM barrel RD05_RS00560 IPR031691 RD05_RS00560 RD05_RS00565 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related RD05_RS00565 IPR011051 RmlC-like cupin domain RD05_RS00565 IPR014710 RmlC-like jelly roll fold RD05_RS00570 IPR005913 dTDP-4-dehydrorhamnose reductase RD05_RS00570 IPR016040 NAD(P)-binding domain RD05_RS00570 IPR029903 RD05_RS00570 RD05_RS00575 IPR005888 dTDP-glucose 4,6-dehydratase RD05_RS00575 IPR016040 NAD(P)-binding domain RD05_RS00575 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS00580 IPR001584 Integrase, catalytic core RD05_RS00580 IPR009057 Homeodomain-like RD05_RS00580 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00580 IPR012337 Ribonuclease H-like domain RD05_RS00580 IPR024967 DNA-binding domain, IS481-type RD05_RS00585 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD05_RS00590 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD05_RS00590 IPR006233 Cystathionine beta-lyase, bacterial RD05_RS00590 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS00590 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS00590 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS00595 IPR001853 DSBA-like thioredoxin domain RD05_RS00595 IPR012336 Thioredoxin-like fold RD05_RS00595 IPR013766 Thioredoxin domain RD05_RS00595 IPR017937 Thioredoxin, conserved site RD05_RS00595 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RD05_RS00600 IPR007730 Sporulation-related domain RD05_RS00605 IPR001278 Arginine-tRNA ligase RD05_RS00605 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS00605 IPR005148 Arginyl tRNA synthetase N-terminal domain RD05_RS00605 IPR008909 DALR anticodon binding RD05_RS00605 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD05_RS00605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS00610 IPR014991 Protein of unknown function DUF1840 RD05_RS00620 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS00620 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS00625 IPR000515 MetI-like domain RD05_RS00630 IPR000515 MetI-like domain RD05_RS00640 IPR003439 ABC transporter-like RD05_RS00640 IPR003593 AAA+ ATPase domain RD05_RS00640 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS00640 IPR012340 Nucleic acid-binding, OB-fold RD05_RS00640 IPR013611 Transport-associated OB, type 2 RD05_RS00640 IPR017871 ABC transporter, conserved site RD05_RS00640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00645 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD05_RS00645 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RD05_RS00645 IPR029052 Metallo-dependent phosphatase-like RD05_RS00650 IPR001584 Integrase, catalytic core RD05_RS00650 IPR009057 Homeodomain-like RD05_RS00650 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00650 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00650 IPR012337 Ribonuclease H-like domain RD05_RS00650 IPR024967 DNA-binding domain, IS481-type RD05_RS00655 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RD05_RS00655 IPR004393 Nicotinate-nucleotide pyrophosphorylase RD05_RS00655 IPR013785 Aldolase-type TIM barrel RD05_RS00655 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal RD05_RS00655 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RD05_RS00660 IPR011213 Nicotinic acid mononucleotide biosynthesis protein RD05_RS00660 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00660 IPR015797 NUDIX hydrolase domain-like RD05_RS00670 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD05_RS00670 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS00680 IPR001851 ABC transporter, permease RD05_RS00685 IPR001851 ABC transporter, permease RD05_RS00690 IPR003439 ABC transporter-like RD05_RS00690 IPR003593 AAA+ ATPase domain RD05_RS00690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00690 IPR032823 RD05_RS00690 RD05_RS00695 IPR009499 Protein of unknown function DUF1116 RD05_RS00695 IPR024033 Uncharacterised domain, YlbE RD05_RS00700 IPR000709 Leu/Ile/Val-binding protein RD05_RS00700 IPR028081 Leucine-binding protein domain RD05_RS00700 IPR028082 Periplasmic binding protein-like I RD05_RS00705 IPR000847 Transcription regulator HTH, LysR RD05_RS00705 IPR005119 LysR, substrate-binding RD05_RS00705 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00710 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS00710 IPR016040 NAD(P)-binding domain RD05_RS00715 IPR000120 Amidase RD05_RS00715 IPR023631 Amidase signature domain RD05_RS00720 IPR000951 Phthalate dioxygenase reductase RD05_RS00720 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS00720 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS00720 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS00720 IPR008333 Oxidoreductase, FAD-binding domain RD05_RS00720 IPR012675 Beta-grasp domain RD05_RS00720 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS00725 IPR000086 NUDIX hydrolase domain RD05_RS00725 IPR015376 Zinc ribbon, NADH pyrophosphatase RD05_RS00725 IPR015797 NUDIX hydrolase domain-like RD05_RS00725 IPR020084 NUDIX hydrolase, conserved site RD05_RS00730 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS00730 IPR009057 Homeodomain-like RD05_RS00730 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS00730 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS00735 IPR003673 CoA-transferase family III RD05_RS00735 IPR023606 CoA-transferase family III domain RD05_RS00740 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS00740 IPR011032 GroES (chaperonin 10)-like RD05_RS00740 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS00740 IPR013154 Alcohol dehydrogenase GroES-like RD05_RS00740 IPR016040 NAD(P)-binding domain RD05_RS00740 IPR020843 Polyketide synthase, enoylreductase RD05_RS00745 IPR005064 Bordetella uptake gene RD05_RS00750 IPR001753 Crotonase superfamily RD05_RS00750 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS00750 IPR029045 ClpP/crotonase-like domain RD05_RS00755 IPR003439 ABC transporter-like RD05_RS00755 IPR003593 AAA+ ATPase domain RD05_RS00755 IPR017871 ABC transporter, conserved site RD05_RS00755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00760 IPR015168 SsuA/THI5-like RD05_RS00765 IPR000515 MetI-like domain RD05_RS00770 IPR000524 Transcription regulator HTH, GntR RD05_RS00770 IPR011663 UbiC transcription regulator-associated RD05_RS00770 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00770 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS00775 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS00775 IPR015168 SsuA/THI5-like RD05_RS00780 IPR005064 Bordetella uptake gene RD05_RS00785 IPR000524 Transcription regulator HTH, GntR RD05_RS00785 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00785 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS00790 IPR001584 Integrase, catalytic core RD05_RS00790 IPR009057 Homeodomain-like RD05_RS00790 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00790 IPR012337 Ribonuclease H-like domain RD05_RS00790 IPR024967 DNA-binding domain, IS481-type RD05_RS00800 IPR005064 Bordetella uptake gene RD05_RS00805 IPR000891 Pyruvate carboxyltransferase RD05_RS00805 IPR013785 Aldolase-type TIM barrel RD05_RS00815 IPR000847 Transcription regulator HTH, LysR RD05_RS00815 IPR005119 LysR, substrate-binding RD05_RS00815 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00820 IPR003358 tRNA (guanine-N-7) methyltransferase RD05_RS00820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS00825 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS00825 IPR002410 Peptidase S33 RD05_RS00825 IPR005944 Proline iminopeptidase RD05_RS00825 IPR029058 Alpha/Beta hydrolase fold RD05_RS00830 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RD05_RS00830 IPR010035 ThiS, thiamine-biosynthesis RD05_RS00830 IPR012675 Beta-grasp domain RD05_RS00830 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD05_RS00835 IPR007055 BON domain RD05_RS00835 IPR018392 LysM domain RD05_RS00840 IPR001584 Integrase, catalytic core RD05_RS00840 IPR009057 Homeodomain-like RD05_RS00840 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS00840 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00840 IPR012337 Ribonuclease H-like domain RD05_RS00840 IPR024967 DNA-binding domain, IS481-type RD05_RS00845 IPR002220 DapA-like RD05_RS00845 IPR013785 Aldolase-type TIM barrel RD05_RS00845 IPR020624 Dihydrodipicolinate synthetase, conserved site RD05_RS00845 IPR020625 Dihydrodipicolinate synthetase, active site RD05_RS00850 IPR003018 GAF domain RD05_RS00850 IPR029016 GAF domain-like RD05_RS00855 IPR004839 Aminotransferase, class I/classII RD05_RS00855 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS00855 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS00855 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS00860 IPR000537 UbiA prenyltransferase family RD05_RS00860 IPR006370 4-hydroxybenzoate polyprenyl transferase RD05_RS00860 IPR030470 RD05_RS00860 RD05_RS00860 IPR031103 RD05_RS00860 RD05_RS00865 IPR025421 Protein of unknown function DUF4148 RD05_RS00870 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase RD05_RS00870 IPR016040 NAD(P)-binding domain RD05_RS00870 IPR032095 RD05_RS00870 RD05_RS00875 IPR000524 Transcription regulator HTH, GntR RD05_RS00875 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS00875 IPR011711 GntR, C-terminal RD05_RS00875 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00880 IPR001465 Malate synthase RD05_RS00880 IPR006253 Malate synthase G RD05_RS00880 IPR011076 Malate synthase-like RD05_RS00880 IPR023310 Malate synthase G, beta sub-domain RD05_RS00885 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS00885 IPR009057 Homeodomain-like RD05_RS00885 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS00885 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS00895 IPR006076 FAD dependent oxidoreductase RD05_RS00895 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS00900 IPR003439 ABC transporter-like RD05_RS00900 IPR003593 AAA+ ATPase domain RD05_RS00900 IPR017871 ABC transporter, conserved site RD05_RS00900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00905 IPR000515 MetI-like domain RD05_RS00910 IPR015168 SsuA/THI5-like RD05_RS00910 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RD05_RS00915 IPR000847 Transcription regulator HTH, LysR RD05_RS00915 IPR005119 LysR, substrate-binding RD05_RS00915 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00920 IPR019647 PhoP regulatory network protein YrbL RD05_RS00925 IPR001296 Glycosyl transferase, family 1 RD05_RS00925 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS00930 IPR005064 Bordetella uptake gene RD05_RS00935 IPR006680 Amidohydrolase 1 RD05_RS00935 IPR011059 Metal-dependent hydrolase, composite domain RD05_RS00935 IPR032466 RD05_RS00935 RD05_RS00940 IPR000847 Transcription regulator HTH, LysR RD05_RS00940 IPR005119 LysR, substrate-binding RD05_RS00940 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00945 IPR000524 Transcription regulator HTH, GntR RD05_RS00945 IPR011663 UbiC transcription regulator-associated RD05_RS00945 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS00945 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS00950 IPR005064 Bordetella uptake gene RD05_RS00955 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD05_RS00955 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS00960 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD05_RS00960 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS00965 IPR011051 RmlC-like cupin domain RD05_RS00965 IPR014710 RmlC-like jelly roll fold RD05_RS00965 IPR025979 ChrR-like cupin domain RD05_RS00970 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS00970 IPR010105 TonB-dependent siderophore receptor RD05_RS00970 IPR012910 TonB-dependent receptor, plug RD05_RS00975 IPR000424 Primosome PriB/single-strand DNA-binding RD05_RS00975 IPR011344 Single-stranded DNA-binding protein RD05_RS00975 IPR012340 Nucleic acid-binding, OB-fold RD05_RS00980 IPR011701 Major facilitator superfamily RD05_RS00980 IPR020846 Major facilitator superfamily domain RD05_RS00985 IPR004602 UvrABC system subunit A RD05_RS00985 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS00985 IPR017871 ABC transporter, conserved site RD05_RS00985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS00990 IPR004045 Glutathione S-transferase, N-terminal RD05_RS00990 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS00990 IPR012336 Thioredoxin-like fold RD05_RS00995 IPR003607 HD/PDEase domain RD05_RS00995 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase RD05_RS00995 IPR006674 HD domain RD05_RS00995 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RD05_RS00995 IPR026875 Phosphohydrolase-associated domain RD05_RS01000 IPR016037 3-dehydroquinate synthase AroB RD05_RS01000 IPR030960 RD05_RS01000 RD05_RS01000 IPR030963 RD05_RS01000 RD05_RS01005 IPR000623 Shikimate kinase/Threonine synthase-like 1 RD05_RS01005 IPR023000 Shikimate kinase, conserved site RD05_RS01005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01005 IPR031322 RD05_RS01005 RD05_RS01010 IPR001264 Glycosyl transferase, family 51 RD05_RS01010 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS01010 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS01010 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01010 IPR023346 Lysozyme-like domain RD05_RS01010 IPR031376 RD05_RS01010 RD05_RS01015 IPR002908 Frataxin/CyaY RD05_RS01015 IPR020895 Frataxin conserved site RD05_RS01020 IPR000183 Ornithine/DAP/Arg decarboxylase RD05_RS01020 IPR002986 Diaminopimelate decarboxylase, LysA RD05_RS01020 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD05_RS01020 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RD05_RS01020 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RD05_RS01020 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RD05_RS01020 IPR029066 PLP-binding barrel RD05_RS01025 IPR002541 Cytochrome c assembly protein RD05_RS01025 IPR017562 Cytochrome c-type biogenesis protein CcsA RD05_RS01030 IPR007816 ResB-like domain RD05_RS01035 IPR009056 Cytochrome c-like domain RD05_RS01035 IPR024167 Cytochrome c4 RD05_RS01040 IPR006073 GTP binding domain RD05_RS01040 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RD05_RS01040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01045 IPR001731 Porphobilinogen synthase RD05_RS01045 IPR013785 Aldolase-type TIM barrel RD05_RS01045 IPR030656 RD05_RS01045 RD05_RS01050 IPR000620 Drug/metabolite transporter RD05_RS01055 IPR003834 Cytochrome c assembly protein, transmembrane domain RD05_RS01055 IPR012336 Thioredoxin-like fold RD05_RS01055 IPR017937 Thioredoxin, conserved site RD05_RS01055 IPR022910 Thiol:disulphide interchange protein DsbD RD05_RS01055 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RD05_RS01060 IPR004323 Divalent ion tolerance protein, CutA RD05_RS01060 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD05_RS01065 IPR001310 Histidine triad (HIT) protein RD05_RS01065 IPR011146 HIT-like domain RD05_RS01070 IPR000456 Ribosomal protein L17 RD05_RS01075 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain RD05_RS01075 IPR011260 RNA polymerase, alpha subunit, C-terminal RD05_RS01075 IPR011262 DNA-directed RNA polymerase, insert domain RD05_RS01075 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RD05_RS01075 IPR011773 DNA-directed RNA polymerase, alpha subunit RD05_RS01080 IPR001912 Ribosomal protein S4/S9, N-terminal RD05_RS01080 IPR002942 RNA-binding S4 domain RD05_RS01080 IPR005709 Ribosomal protein S4, bacterial-type RD05_RS01080 IPR018079 Ribosomal protein S4, conserved site RD05_RS01080 IPR022801 Ribosomal protein S4/S9 RD05_RS01085 IPR001971 Ribosomal protein S11 RD05_RS01085 IPR018102 Ribosomal S11, conserved site RD05_RS01085 IPR019981 Ribosomal protein S11, bacterial-type RD05_RS01090 IPR001892 Ribosomal protein S13 RD05_RS01090 IPR010979 Ribosomal protein S13-like, H2TH RD05_RS01090 IPR018269 Ribosomal protein S13, conserved site RD05_RS01090 IPR019980 Ribosomal protein S13, bacterial-type RD05_RS01090 IPR027437 30s ribosomal protein S13, C-terminal RD05_RS01095 IPR000473 Ribosomal protein L36 RD05_RS01100 IPR004368 Translation initiation factor IF-1 RD05_RS01100 IPR006196 RNA-binding domain, S1, IF1 type RD05_RS01100 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01105 IPR002208 SecY/SEC61-alpha family RD05_RS01105 IPR023201 SecY subunit domain RD05_RS01105 IPR026593 Protein translocase subunit SecY RD05_RS01105 IPR030659 RD05_RS01105 RD05_RS01110 IPR005749 Ribosomal protein L15, bacterial-type RD05_RS01110 IPR021131 Ribosomal protein L18e/L15P RD05_RS01110 IPR030878 RD05_RS01110 RD05_RS01115 IPR005996 Ribosomal protein L30, bacterial-type RD05_RS01115 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RD05_RS01115 IPR018038 Ribosomal protein L30, conserved site RD05_RS01120 IPR000851 Ribosomal protein S5 RD05_RS01120 IPR005324 Ribosomal protein S5, C-terminal RD05_RS01120 IPR005712 Ribosomal protein S5, bacterial-type RD05_RS01120 IPR013810 Ribosomal protein S5, N-terminal RD05_RS01120 IPR014720 Double-stranded RNA-binding domain RD05_RS01120 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS01120 IPR018192 Ribosomal protein S5, N-terminal, conserved site RD05_RS01120 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS01125 IPR004389 Ribosomal protein L18, bacterial-type RD05_RS01125 IPR005484 Ribosomal protein L18/L5 RD05_RS01130 IPR000702 Ribosomal protein L6 RD05_RS01130 IPR002358 Ribosomal protein L6, conserved site RD05_RS01130 IPR019906 Ribosomal protein L6, bacterial-type RD05_RS01130 IPR020040 Ribosomal protein L6, alpha-beta domain RD05_RS01135 IPR000630 Ribosomal protein S8 RD05_RS01140 IPR001209 Ribosomal protein S14 RD05_RS01140 IPR023036 Ribosomal protein S14, bacterial/plastid RD05_RS01145 IPR002132 Ribosomal protein L5 RD05_RS01145 IPR020929 Ribosomal protein L5, conserved site RD05_RS01145 IPR020930 Ribosomal protein L5, bacterial-type RD05_RS01145 IPR022803 Ribosomal protein L5 domain RD05_RS01145 IPR031309 RD05_RS01145 RD05_RS01145 IPR031310 RD05_RS01145 RD05_RS01150 IPR003256 Ribosomal protein L24 RD05_RS01150 IPR005825 Ribosomal protein L24/L26, conserved site RD05_RS01150 IPR008991 Translation protein SH3-like domain RD05_RS01150 IPR014722 Ribosomal protein L2 domain 2 RD05_RS01155 IPR000218 Ribosomal protein L14b/L23e RD05_RS01155 IPR005745 Ribosomal protein L14, bacterial-type RD05_RS01155 IPR019972 Ribosomal protein L14 conserved site RD05_RS01165 IPR015590 Aldehyde dehydrogenase domain RD05_RS01165 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS01165 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS01165 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS01170 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS01170 IPR029058 Alpha/Beta hydrolase fold RD05_RS01175 IPR000266 Ribosomal protein S17 RD05_RS01175 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01175 IPR019979 Ribosomal protein S17, conserved site RD05_RS01175 IPR019984 Ribosomal protein S17, bacterial-type RD05_RS01180 IPR001854 Ribosomal protein L29 RD05_RS01180 IPR018254 Ribosomal protein L29, conserved site RD05_RS01185 IPR000114 Ribosomal protein L16 RD05_RS01185 IPR016180 Ribosomal protein L10e/L16 RD05_RS01185 IPR020798 Ribosomal protein L16, conserved site RD05_RS01190 IPR001351 Ribosomal protein S3, C-terminal RD05_RS01190 IPR004044 K Homology domain, type 2 RD05_RS01190 IPR004087 K Homology domain RD05_RS01190 IPR005704 Ribosomal protein S3, bacterial RD05_RS01190 IPR009019 K homology domain, prokaryotic type RD05_RS01190 IPR015946 K homology domain-like, alpha/beta RD05_RS01190 IPR018280 Ribosomal protein S3, conserved site RD05_RS01195 IPR001063 Ribosomal protein L22/L17 RD05_RS01195 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RD05_RS01195 IPR018260 Ribosomal protein L22/L17, conserved site RD05_RS01200 IPR002222 Ribosomal protein S19/S15 RD05_RS01200 IPR005732 Ribosomal protein S19, bacterial-type RD05_RS01200 IPR020934 Ribosomal protein S19 conserved site RD05_RS01200 IPR023575 Ribosomal protein S19, superfamily RD05_RS01205 IPR002171 Ribosomal protein L2 RD05_RS01205 IPR005880 Ribosomal protein L2, bacterial/organellar-type RD05_RS01205 IPR008991 Translation protein SH3-like domain RD05_RS01205 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01205 IPR014722 Ribosomal protein L2 domain 2 RD05_RS01205 IPR014726 Ribosomal protein L2, domain 3 RD05_RS01205 IPR022666 Ribosomal Proteins L2, RNA binding domain RD05_RS01205 IPR022669 Ribosomal protein L2, C-terminal RD05_RS01205 IPR022671 Ribosomal protein L2, conserved site RD05_RS01210 IPR012677 Nucleotide-binding, alpha-beta plait RD05_RS01210 IPR012678 Ribosomal protein L23/L15e core domain RD05_RS01210 IPR013025 Ribosomal protein L25/L23 RD05_RS01215 IPR002136 Ribosomal protein L4/L1e RD05_RS01215 IPR013005 Ribosomal protein L4/L1e, bacterial-type RD05_RS01215 IPR023574 Ribosomal protein L4 domain RD05_RS01220 IPR000597 Ribosomal protein L3 RD05_RS01220 IPR009000 Translation protein, beta-barrel domain RD05_RS01220 IPR019926 Ribosomal protein L3, conserved site RD05_RS01220 IPR019927 Ribosomal protein L3, bacterial/organelle-type RD05_RS01225 IPR001848 Ribosomal protein S10 RD05_RS01225 IPR018268 Ribosomal protein S10, conserved site RD05_RS01225 IPR027486 Ribosomal protein S10 domain RD05_RS01230 IPR000795 Elongation factor, GTP-binding domain RD05_RS01230 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RD05_RS01230 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD05_RS01230 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RD05_RS01230 IPR005225 Small GTP-binding protein domain RD05_RS01230 IPR009000 Translation protein, beta-barrel domain RD05_RS01230 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RD05_RS01230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01230 IPR031157 RD05_RS01230 RD05_RS01235 IPR000640 Translation elongation factor EFG, V domain RD05_RS01235 IPR000795 Elongation factor, GTP-binding domain RD05_RS01235 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD05_RS01235 IPR004540 Translation elongation factor EFG/EF2 RD05_RS01235 IPR005225 Small GTP-binding protein domain RD05_RS01235 IPR005517 Translation elongation factor EFG/EF2, domain IV RD05_RS01235 IPR009000 Translation protein, beta-barrel domain RD05_RS01235 IPR009022 Elongation factor G, III-V domain RD05_RS01235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS01235 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS01235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01235 IPR031157 RD05_RS01235 RD05_RS01240 IPR000235 Ribosomal protein S5/S7 RD05_RS01240 IPR005717 Ribosomal protein S7, bacterial/organellar-type RD05_RS01240 IPR020606 Ribosomal protein S7, conserved site RD05_RS01240 IPR023798 Ribosomal protein S7 domain RD05_RS01245 IPR005679 Ribosomal protein S12, bacteria RD05_RS01245 IPR006032 Ribosomal protein S12/S23 RD05_RS01245 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01250 IPR001584 Integrase, catalytic core RD05_RS01250 IPR009057 Homeodomain-like RD05_RS01250 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01250 IPR012337 Ribonuclease H-like domain RD05_RS01250 IPR024967 DNA-binding domain, IS481-type RD05_RS01255 IPR003148 Regulator of K+ conductance, N-terminal RD05_RS01255 IPR013099 Two pore domain potassium channel domain RD05_RS01255 IPR016040 NAD(P)-binding domain RD05_RS01260 IPR008775 Phytanoyl-CoA dioxygenase RD05_RS01265 IPR002549 Uncharacterised protein family UPF0118 RD05_RS01270 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS01270 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS01275 IPR004821 Cytidyltransferase-like domain RD05_RS01275 IPR011914 RfaE bifunctional protein, domain II RD05_RS01275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS01280 IPR003423 Outer membrane efflux protein RD05_RS01280 IPR010130 Type I secretion outer membrane protein, TolC RD05_RS01285 IPR003423 Outer membrane efflux protein RD05_RS01290 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RD05_RS01290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS01295 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RD05_RS01295 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD05_RS01295 IPR029056 Ribokinase-like RD05_RS01300 IPR008867 Thiazole biosynthesis RD05_RS01300 IPR013785 Aldolase-type TIM barrel RD05_RS01305 IPR002491 ABC transporter periplasmic binding domain RD05_RS01310 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS01310 IPR012910 TonB-dependent receptor, plug RD05_RS01315 IPR000489 Pterin-binding RD05_RS01315 IPR003726 Homocysteine S-methyltransferase RD05_RS01315 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RD05_RS01315 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RD05_RS01315 IPR006158 Cobalamin (vitamin B12)-binding domain RD05_RS01315 IPR011005 Dihydropteroate synthase-like RD05_RS01315 IPR011822 Cobalamin-dependent methionine synthase RD05_RS01320 IPR001584 Integrase, catalytic core RD05_RS01320 IPR009057 Homeodomain-like RD05_RS01320 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01320 IPR012337 Ribonuclease H-like domain RD05_RS01320 IPR024967 DNA-binding domain, IS481-type RD05_RS01330 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RD05_RS01330 IPR017945 DHBP synthase RibB-like alpha/beta domain RD05_RS01335 IPR001214 SET domain RD05_RS01340 IPR021134 Bestrophin/UPF0187 RD05_RS01345 IPR000485 AsnC-type HTH domain RD05_RS01345 IPR011008 Dimeric alpha-beta barrel RD05_RS01345 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01345 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS01345 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS01345 IPR019888 Transcription regulator AsnC-type RD05_RS01350 IPR000399 TPP-binding enzyme, conserved site RD05_RS01350 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS01350 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS01350 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS01350 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS01350 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS01350 IPR029061 Thiamin diphosphate-binding fold RD05_RS01355 IPR002347 Glucose/ribitol dehydrogenase RD05_RS01355 IPR016040 NAD(P)-binding domain RD05_RS01360 IPR015590 Aldehyde dehydrogenase domain RD05_RS01360 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS01360 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS01360 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS01360 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS01360 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS01365 IPR002347 Glucose/ribitol dehydrogenase RD05_RS01365 IPR016040 NAD(P)-binding domain RD05_RS01365 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS01370 IPR000515 MetI-like domain RD05_RS01375 IPR003439 ABC transporter-like RD05_RS01375 IPR003593 AAA+ ATPase domain RD05_RS01375 IPR017871 ABC transporter, conserved site RD05_RS01375 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01380 IPR015168 SsuA/THI5-like RD05_RS01385 IPR000380 DNA topoisomerase, type IA RD05_RS01385 IPR003601 DNA topoisomerase, type IA, domain 2 RD05_RS01385 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RD05_RS01385 IPR005738 DNA topoisomerase III RD05_RS01385 IPR006171 Toprim domain RD05_RS01385 IPR013497 DNA topoisomerase, type IA, central RD05_RS01385 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RD05_RS01385 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RD05_RS01385 IPR023405 DNA topoisomerase, type IA, core domain RD05_RS01385 IPR023406 DNA topoisomerase, type IA, active site RD05_RS01385 IPR025589 Topoisomerase C-terminal repeat RD05_RS01390 IPR018677 Protein of unknown function DUF2157, membrane RD05_RS01390 IPR025513 Domain of unknown function DUF4401 RD05_RS01390 IPR025833 GDYXXLXY protein RD05_RS01400 IPR007456 Protein of unknown function DUF494 RD05_RS01405 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS01405 IPR010917 TonB-dependent receptor, conserved site RD05_RS01405 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RD05_RS01405 IPR011276 TonB-dependent haem/haemoglobin receptor RD05_RS01405 IPR012910 TonB-dependent receptor, plug RD05_RS01410 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS01410 IPR011853 TRAP transporter, 4TM/12TM fusion protein RD05_RS01415 IPR011852 TRAP transporter solute receptor, TAXI family RD05_RS01420 IPR001608 Alanine racemase, N-terminal RD05_RS01420 IPR026956 D-serine dehydratase-like domain RD05_RS01420 IPR029066 PLP-binding barrel RD05_RS01425 IPR005064 Bordetella uptake gene RD05_RS01430 IPR004636 Acetylornithine/Succinylornithine transaminase family RD05_RS01430 IPR005814 Aminotransferase class-III RD05_RS01430 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS01430 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS01430 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS01435 IPR023387 DUF1653-like domain RD05_RS01440 IPR000089 Biotin/lipoyl attachment RD05_RS01440 IPR001882 Biotin-binding site RD05_RS01440 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS01440 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD05_RS01440 IPR005482 Biotin carboxylase, C-terminal RD05_RS01440 IPR011053 Single hybrid motif RD05_RS01440 IPR011054 Rudiment single hybrid motif RD05_RS01440 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS01440 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS01440 IPR016185 Pre-ATP-grasp domain RD05_RS01445 IPR000022 Carboxyl transferase RD05_RS01445 IPR029045 ClpP/crotonase-like domain RD05_RS01450 IPR002155 Thiolase RD05_RS01450 IPR016039 Thiolase-like RD05_RS01450 IPR020610 Thiolase, active site RD05_RS01450 IPR020616 Thiolase, N-terminal RD05_RS01450 IPR020617 Thiolase, C-terminal RD05_RS01460 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS01460 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS01460 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS01460 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS01465 IPR001584 Integrase, catalytic core RD05_RS01465 IPR009057 Homeodomain-like RD05_RS01465 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01465 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01465 IPR012337 Ribonuclease H-like domain RD05_RS01465 IPR024967 DNA-binding domain, IS481-type RD05_RS01470 IPR001279 Beta-lactamase-like RD05_RS01475 IPR000551 MerR-type HTH domain RD05_RS01475 IPR009061 DNA binding domain, putative RD05_RS01480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS01480 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS01485 IPR001584 Integrase, catalytic core RD05_RS01485 IPR009057 Homeodomain-like RD05_RS01485 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01485 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01485 IPR012337 Ribonuclease H-like domain RD05_RS01485 IPR024967 DNA-binding domain, IS481-type RD05_RS01495 IPR009057 Homeodomain-like RD05_RS01495 IPR010499 Bacterial transcription activator, effector binding RD05_RS01495 IPR011256 Regulatory factor, effector binding domain RD05_RS01495 IPR018060 DNA binding HTH domain, AraC-type RD05_RS01495 IPR018062 HTH domain AraC-type, conserved site RD05_RS01495 IPR020449 Transcription regulator HTH, AraC- type RD05_RS01495 IPR029442 GyrI-like small molecule binding domain RD05_RS01500 IPR000262 FMN-dependent dehydrogenase RD05_RS01500 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD05_RS01500 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD05_RS01500 IPR013785 Aldolase-type TIM barrel RD05_RS01510 IPR005064 Bordetella uptake gene RD05_RS01515 IPR000120 Amidase RD05_RS01515 IPR020556 Amidase, conserved site RD05_RS01515 IPR023631 Amidase signature domain RD05_RS01520 IPR005471 Transcription regulator IclR, N-terminal RD05_RS01520 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01520 IPR014757 Transcription regulator IclR, C-terminal RD05_RS01520 IPR029016 GAF domain-like RD05_RS01525 IPR000565 DNA topoisomerase, type IIA, subunit B RD05_RS01525 IPR001241 DNA topoisomerase, type IIA RD05_RS01525 IPR002288 DNA gyrase B subunit, C-terminal RD05_RS01525 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS01525 IPR006171 Toprim domain RD05_RS01525 IPR011557 DNA gyrase, subunit B RD05_RS01525 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RD05_RS01525 IPR013759 DNA topoisomerase, type IIA, central domain RD05_RS01525 IPR013760 DNA topoisomerase, type IIA-like domain RD05_RS01525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS01525 IPR018522 DNA topoisomerase, type IIA, conserved site RD05_RS01525 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS01530 IPR001001 DNA polymerase III, beta chain RD05_RS01530 IPR022634 DNA polymerase III, beta chain, N-terminal RD05_RS01530 IPR022635 DNA polymerase III, beta chain, C-terminal RD05_RS01530 IPR022637 DNA polymerase III, beta chain, central RD05_RS01535 IPR001957 Chromosomal replication control, initiator DnaA RD05_RS01535 IPR003593 AAA+ ATPase domain RD05_RS01535 IPR010921 Trp repressor/replication initiator RD05_RS01535 IPR013159 Chromosomal replication initiator, DnaA C-terminal RD05_RS01535 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RD05_RS01535 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RD05_RS01535 IPR020591 Chromosomal replication control, initiator DnaA-like RD05_RS01535 IPR024633 DnaA N-terminal domain RD05_RS01535 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS01540 IPR000271 Ribosomal protein L34 RD05_RS01540 IPR020939 Ribosomal protein L34, conserved site RD05_RS01545 IPR000100 Ribonuclease P RD05_RS01545 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS01545 IPR020539 Ribonuclease P, conserved site RD05_RS01545 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS01550 IPR002696 Putative membrane protein insertion efficiency factor RD05_RS01555 IPR001708 Membrane insertase OXA1/ALB3/YidC RD05_RS01555 IPR019998 Membrane insertase YidC RD05_RS01555 IPR028053 Membrane insertase YidC, N-terminal RD05_RS01555 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RD05_RS01560 IPR001584 Integrase, catalytic core RD05_RS01560 IPR009057 Homeodomain-like RD05_RS01560 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01560 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01560 IPR012337 Ribonuclease H-like domain RD05_RS01560 IPR024967 DNA-binding domain, IS481-type RD05_RS01565 IPR003680 Flavodoxin-like fold RD05_RS01565 IPR029039 Flavoprotein-like RD05_RS01570 IPR000847 Transcription regulator HTH, LysR RD05_RS01570 IPR005119 LysR, substrate-binding RD05_RS01570 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01580 IPR021597 Protein of unknown function DUF3220 RD05_RS01585 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS01585 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS01585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS01585 IPR013727 Two-component sensor kinase N-terminal RD05_RS01590 IPR002104 Integrase, catalytic RD05_RS01590 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS01590 IPR013762 Integrase-like, catalytic core RD05_RS01620 IPR011335 Restriction endonuclease type II-like RD05_RS01620 IPR011604 Exonuclease, phage-type/RecB, C-terminal RD05_RS01620 IPR019080 YqaJ viral recombinase RD05_RS01625 IPR004590 DNA single-strand annealing protein RecT RD05_RS01625 IPR018330 RecT family RD05_RS01650 IPR001584 Integrase, catalytic core RD05_RS01650 IPR009057 Homeodomain-like RD05_RS01650 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01650 IPR012337 Ribonuclease H-like domain RD05_RS01650 IPR024967 DNA-binding domain, IS481-type RD05_RS01665 IPR001584 Integrase, catalytic core RD05_RS01665 IPR009057 Homeodomain-like RD05_RS01665 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01665 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01665 IPR012337 Ribonuclease H-like domain RD05_RS01665 IPR024967 DNA-binding domain, IS481-type RD05_RS01670 IPR006175 YjgF/Yer057p/UK114 family RD05_RS01670 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS01675 IPR004046 Glutathione S-transferase, C-terminal RD05_RS01675 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS01675 IPR012336 Thioredoxin-like fold RD05_RS01680 IPR001107 Band 7 protein RD05_RS01680 IPR001972 Stomatin family RD05_RS01685 IPR010879 Domain of unknown function DUF1508 RD05_RS01690 IPR001608 Alanine racemase, N-terminal RD05_RS01690 IPR026956 D-serine dehydratase-like domain RD05_RS01690 IPR029066 PLP-binding barrel RD05_RS01695 IPR006439 HAD hydrolase, subfamily IA RD05_RS01695 IPR023214 HAD-like domain RD05_RS01700 IPR000847 Transcription regulator HTH, LysR RD05_RS01700 IPR005119 LysR, substrate-binding RD05_RS01700 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01705 IPR022000 Domain of unknown function (DUF3596) RD05_RS01715 IPR012556 Entericidin EcnAB RD05_RS01720 IPR005546 Autotransporter beta-domain RD05_RS01720 IPR006315 Outer membrane autotransporter barrel RD05_RS01720 IPR011050 Pectin lyase fold/virulence factor RD05_RS01720 IPR012332 P22 tailspike C-terminal domain-like RD05_RS01720 IPR013425 Autotransporter-associated beta strand repeat RD05_RS01725 IPR007247 Ureidoglycolate hydrolase RD05_RS01725 IPR011051 RmlC-like cupin domain RD05_RS01725 IPR024060 Ureidoglycolate hydrolase domain RD05_RS01730 IPR005064 Bordetella uptake gene RD05_RS01735 IPR000873 AMP-dependent synthetase/ligase RD05_RS01735 IPR020845 AMP-binding, conserved site RD05_RS01735 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS01740 IPR005471 Transcription regulator IclR, N-terminal RD05_RS01740 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01740 IPR014757 Transcription regulator IclR, C-terminal RD05_RS01740 IPR029016 GAF domain-like RD05_RS01745 IPR001753 Crotonase superfamily RD05_RS01745 IPR029045 ClpP/crotonase-like domain RD05_RS01750 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS01750 IPR004675 Alkylhydroperoxidase AhpD core RD05_RS01750 IPR029032 AhpD-like RD05_RS01755 IPR005064 Bordetella uptake gene RD05_RS01760 IPR001584 Integrase, catalytic core RD05_RS01760 IPR009057 Homeodomain-like RD05_RS01760 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01760 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01760 IPR012337 Ribonuclease H-like domain RD05_RS01760 IPR024967 DNA-binding domain, IS481-type RD05_RS01765 IPR006035 Ureohydrolase RD05_RS01765 IPR014033 Arginase RD05_RS01765 IPR020855 Ureohydrolase, manganese-binding site RD05_RS01765 IPR023696 Ureohydrolase domain RD05_RS01770 IPR005814 Aminotransferase class-III RD05_RS01770 IPR010164 Ornithine aminotransferase RD05_RS01770 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS01770 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS01770 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS01775 IPR001584 Integrase, catalytic core RD05_RS01775 IPR009057 Homeodomain-like RD05_RS01775 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01775 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01775 IPR012337 Ribonuclease H-like domain RD05_RS01775 IPR024967 DNA-binding domain, IS481-type RD05_RS01780 IPR000524 Transcription regulator HTH, GntR RD05_RS01780 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS01780 IPR011711 GntR, C-terminal RD05_RS01780 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01785 IPR005064 Bordetella uptake gene RD05_RS01790 IPR006076 FAD dependent oxidoreductase RD05_RS01790 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS01795 IPR004370 4-oxalocrotonate tautomerase RD05_RS01795 IPR014347 Tautomerase/MIF superfamily RD05_RS01800 IPR005839 Methylthiotransferase RD05_RS01800 IPR005840 Ribosomal protein S12 methylthiotransferase RimO RD05_RS01800 IPR006638 Elongator protein 3/MiaB/NifB RD05_RS01800 IPR007197 Radical SAM RD05_RS01800 IPR012340 Nucleic acid-binding, OB-fold RD05_RS01800 IPR013848 Methylthiotransferase, N-terminal RD05_RS01800 IPR020612 Methylthiotransferase, conserved site RD05_RS01800 IPR023404 Radical SAM, alpha/beta horseshoe RD05_RS01800 IPR023970 Methylthiotransferase/radical SAM-type protein RD05_RS01805 IPR002024 Bacterioferritin RD05_RS01805 IPR008331 Ferritin/DPS protein domain RD05_RS01805 IPR009078 Ferritin-like superfamily RD05_RS01805 IPR012347 Ferritin-related RD05_RS01805 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold RD05_RS01810 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RD05_RS01810 IPR031100 RD05_RS01810 RD05_RS01815 IPR032710 RD05_RS01815 RD05_RS01820 IPR023214 HAD-like domain RD05_RS01825 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD05_RS01825 IPR012349 FMN-binding split barrel RD05_RS01825 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent RD05_RS01830 IPR001555 Phosphoribosylglycinamide formyltransferase, active site RD05_RS01830 IPR002376 Formyl transferase, N-terminal RD05_RS01830 IPR005793 Formyl transferase, C-terminal RD05_RS01830 IPR005794 Methionyl-tRNA formyltransferase RD05_RS01830 IPR011034 Formyl transferase, C-terminal-like RD05_RS01835 IPR001584 Integrase, catalytic core RD05_RS01835 IPR009057 Homeodomain-like RD05_RS01835 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01835 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01835 IPR012337 Ribonuclease H-like domain RD05_RS01835 IPR024967 DNA-binding domain, IS481-type RD05_RS01840 IPR000181 Formylmethionine deformylase RD05_RS01840 IPR023635 Peptide deformylase RD05_RS01845 IPR000192 Aminotransferase class V domain RD05_RS01845 IPR010111 Kynureninase RD05_RS01845 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS01845 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS01845 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS01850 IPR000485 AsnC-type HTH domain RD05_RS01850 IPR011008 Dimeric alpha-beta barrel RD05_RS01850 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01850 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS01850 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS01850 IPR019888 Transcription regulator AsnC-type RD05_RS01855 IPR003488 DNA recombination-mediator protein A RD05_RS01860 IPR000891 Pyruvate carboxyltransferase RD05_RS01860 IPR013785 Aldolase-type TIM barrel RD05_RS01870 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS01870 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD05_RS01875 IPR004839 Aminotransferase, class I/classII RD05_RS01875 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS01875 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS01875 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS01880 IPR011078 Uncharacterised protein family UPF0001 RD05_RS01880 IPR029066 PLP-binding barrel RD05_RS01885 IPR005064 Bordetella uptake gene RD05_RS01890 IPR007410 DR1885-like metal-binding protein RD05_RS01895 IPR000847 Transcription regulator HTH, LysR RD05_RS01895 IPR005119 LysR, substrate-binding RD05_RS01895 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01895 IPR017685 Transcription regulator ArgP RD05_RS01900 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD05_RS01905 IPR001584 Integrase, catalytic core RD05_RS01905 IPR009057 Homeodomain-like RD05_RS01905 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01905 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01905 IPR012337 Ribonuclease H-like domain RD05_RS01905 IPR024967 DNA-binding domain, IS481-type RD05_RS01910 IPR001584 Integrase, catalytic core RD05_RS01910 IPR009057 Homeodomain-like RD05_RS01910 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS01910 IPR012337 Ribonuclease H-like domain RD05_RS01910 IPR024967 DNA-binding domain, IS481-type RD05_RS01915 IPR025870 Glyoxalase-like domain RD05_RS01915 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS01920 IPR002811 Aspartate dehydrogenase RD05_RS01920 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD05_RS01920 IPR011182 L-aspartate dehydrogenase RD05_RS01920 IPR016040 NAD(P)-binding domain RD05_RS01920 IPR020626 L-aspartate dehydrogenase, prokaryotic RD05_RS01930 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RD05_RS01930 IPR004573 rRNA small subunit methyltransferase B RD05_RS01930 IPR006027 NusB/RsmB/TIM44 RD05_RS01930 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RD05_RS01930 IPR023267 RNA (C5-cytosine) methyltransferase RD05_RS01930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS01935 IPR025500 Protein of unknown function DUF4390 RD05_RS01940 IPR000014 PAS domain RD05_RS01940 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS01940 IPR003660 HAMP linker domain RD05_RS01940 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS01940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS01940 IPR013656 PAS fold-4 RD05_RS01940 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator RD05_RS01945 IPR001789 Signal transduction response regulator, receiver domain RD05_RS01945 IPR009057 Homeodomain-like RD05_RS01945 IPR011006 CheY-like superfamily RD05_RS01950 IPR003148 Regulator of K+ conductance, N-terminal RD05_RS01950 IPR006036 Potassium uptake protein TrkA RD05_RS01950 IPR006037 Regulator of K+ conductance, C-terminal RD05_RS01950 IPR016040 NAD(P)-binding domain RD05_RS01955 IPR003445 Cation transporter RD05_RS01955 IPR004772 Potassium uptake protein TrkH family RD05_RS01960 IPR000835 MarR-type HTH domain RD05_RS01960 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS01965 IPR003777 XdhC- CoxI RD05_RS01965 IPR016185 Pre-ATP-grasp domain RD05_RS01965 IPR027051 XdhC Rossmann domain RD05_RS01970 IPR025877 MobA-like NTP transferase domain RD05_RS01970 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS01975 IPR006680 Amidohydrolase 1 RD05_RS01975 IPR032466 RD05_RS01975 RD05_RS01980 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RD05_RS01980 IPR028615 Maleate isomerase RD05_RS01985 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS01985 IPR029058 Alpha/Beta hydrolase fold RD05_RS01995 IPR000868 Isochorismatase-like RD05_RS02000 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD05_RS02000 IPR032710 RD05_RS02000 RD05_RS02005 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RD05_RS02005 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD05_RS02005 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD05_RS02005 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS02010 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS02010 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD05_RS02010 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS02010 IPR028202 Reductase, C-terminal RD05_RS02015 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS02020 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS02020 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD05_RS02025 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD05_RS02025 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD05_RS02030 IPR002346 Molybdopterin dehydrogenase, FAD-binding RD05_RS02030 IPR005107 CO dehydrogenase flavoprotein, C-terminal RD05_RS02030 IPR016166 FAD-binding, type 2 RD05_RS02030 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS02030 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS02035 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS02035 IPR002888 [2Fe-2S]-binding RD05_RS02035 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS02035 IPR010419 Carbon monoxide dehydrogenase subunit G RD05_RS02035 IPR012675 Beta-grasp domain RD05_RS02035 IPR023393 START-like domain RD05_RS02040 IPR015168 SsuA/THI5-like RD05_RS02040 IPR027939 NMT1/THI5 family RD05_RS02045 IPR003439 ABC transporter-like RD05_RS02045 IPR003593 AAA+ ATPase domain RD05_RS02045 IPR017871 ABC transporter, conserved site RD05_RS02045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02050 IPR000515 MetI-like domain RD05_RS02055 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS02060 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS02065 IPR006336 Glutamate--cysteine ligase, GCS2 RD05_RS02065 IPR011793 Carboxylate-amine ligase, predicted RD05_RS02070 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RD05_RS02070 IPR013216 Methyltransferase type 11 RD05_RS02070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS02075 IPR000836 Phosphoribosyltransferase domain RD05_RS02075 IPR029057 Phosphoribosyltransferase-like RD05_RS02080 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD05_RS02080 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RD05_RS02080 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS02080 IPR029028 Alpha/beta knot methyltransferases RD05_RS02085 IPR005064 Bordetella uptake gene RD05_RS02090 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RD05_RS02090 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RD05_RS02090 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS02090 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RD05_RS02090 IPR013328 Dehydrogenase, multihelical RD05_RS02090 IPR016040 NAD(P)-binding domain RD05_RS02095 IPR003708 Bacterial protein export chaperone SecB RD05_RS02100 IPR002109 Glutaredoxin RD05_RS02100 IPR011767 Glutaredoxin active site RD05_RS02100 IPR011900 Glutaredoxin, GrxC RD05_RS02100 IPR012336 Thioredoxin-like fold RD05_RS02100 IPR014025 Glutaredoxin subgroup RD05_RS02105 IPR001763 Rhodanese-like domain RD05_RS02110 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RD05_RS02110 IPR005952 Phosphoglycerate mutase 1 RD05_RS02110 IPR013078 Histidine phosphatase superfamily, clade-1 RD05_RS02110 IPR029033 Histidine phosphatase superfamily RD05_RS02115 IPR011055 Duplicated hybrid motif RD05_RS02115 IPR016047 Peptidase M23 RD05_RS02120 IPR001478 PDZ domain RD05_RS02120 IPR004447 C-terminal-processing peptidase S41A RD05_RS02120 IPR005151 Tail specific protease RD05_RS02120 IPR029045 ClpP/crotonase-like domain RD05_RS02125 IPR000594 UBA/THIF-type NAD/FAD binding fold RD05_RS02125 IPR016040 NAD(P)-binding domain RD05_RS02130 IPR001584 Integrase, catalytic core RD05_RS02130 IPR009057 Homeodomain-like RD05_RS02130 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02130 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02130 IPR012337 Ribonuclease H-like domain RD05_RS02130 IPR024967 DNA-binding domain, IS481-type RD05_RS02135 IPR005064 Bordetella uptake gene RD05_RS02140 IPR005471 Transcription regulator IclR, N-terminal RD05_RS02140 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02140 IPR014757 Transcription regulator IclR, C-terminal RD05_RS02140 IPR029016 GAF domain-like RD05_RS02150 IPR005064 Bordetella uptake gene RD05_RS02155 IPR006680 Amidohydrolase 1 RD05_RS02155 IPR032466 RD05_RS02155 RD05_RS02160 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS02160 IPR009057 Homeodomain-like RD05_RS02160 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS02160 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS02160 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS02165 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS02165 IPR006258 Dihydrolipoamide dehydrogenase RD05_RS02165 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD05_RS02165 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD05_RS02165 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS02170 IPR003439 ABC transporter-like RD05_RS02170 IPR003593 AAA+ ATPase domain RD05_RS02170 IPR017871 ABC transporter, conserved site RD05_RS02170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02175 IPR001851 ABC transporter, permease RD05_RS02175 IPR003439 ABC transporter-like RD05_RS02175 IPR003593 AAA+ ATPase domain RD05_RS02175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02180 IPR001851 ABC transporter, permease RD05_RS02185 IPR000709 Leu/Ile/Val-binding protein RD05_RS02185 IPR028081 Leucine-binding protein domain RD05_RS02185 IPR028082 Periplasmic binding protein-like I RD05_RS02190 IPR005656 MmgE/PrpD RD05_RS02195 IPR000873 AMP-dependent synthetase/ligase RD05_RS02195 IPR020845 AMP-binding, conserved site RD05_RS02195 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS02200 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS02200 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02200 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02200 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS02200 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02205 IPR000089 Biotin/lipoyl attachment RD05_RS02205 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD05_RS02205 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS02205 IPR011053 Single hybrid motif RD05_RS02205 IPR023213 Chloramphenicol acetyltransferase-like domain RD05_RS02210 IPR001753 Crotonase superfamily RD05_RS02210 IPR014748 Crontonase, C-terminal RD05_RS02210 IPR029045 ClpP/crotonase-like domain RD05_RS02215 IPR005475 Transketolase-like, pyrimidine-binding domain RD05_RS02215 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD05_RS02215 IPR029061 Thiamin diphosphate-binding fold RD05_RS02215 IPR033247 RD05_RS02215 RD05_RS02215 IPR033248 RD05_RS02215 RD05_RS02220 IPR001017 Dehydrogenase, E1 component RD05_RS02220 IPR029061 Thiamin diphosphate-binding fold RD05_RS02225 IPR005471 Transcription regulator IclR, N-terminal RD05_RS02225 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02225 IPR014757 Transcription regulator IclR, C-terminal RD05_RS02225 IPR029016 GAF domain-like RD05_RS02230 IPR001753 Crotonase superfamily RD05_RS02230 IPR003781 CoA-binding RD05_RS02230 IPR016040 NAD(P)-binding domain RD05_RS02230 IPR016102 Succinyl-CoA synthetase-like RD05_RS02230 IPR029045 ClpP/crotonase-like domain RD05_RS02230 IPR032875 RD05_RS02230 RD05_RS02235 IPR005064 Bordetella uptake gene RD05_RS02240 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02240 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02240 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS02240 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02245 IPR001753 Crotonase superfamily RD05_RS02245 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS02245 IPR029045 ClpP/crotonase-like domain RD05_RS02250 IPR002155 Thiolase RD05_RS02250 IPR016039 Thiolase-like RD05_RS02250 IPR020616 Thiolase, N-terminal RD05_RS02255 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD05_RS02255 IPR012340 Nucleic acid-binding, OB-fold RD05_RS02255 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD05_RS02265 IPR002539 MaoC-like domain RD05_RS02265 IPR029069 HotDog domain RD05_RS02270 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS02270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS02270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02275 IPR005064 Bordetella uptake gene RD05_RS02280 IPR003673 CoA-transferase family III RD05_RS02280 IPR023606 CoA-transferase family III domain RD05_RS02285 IPR000847 Transcription regulator HTH, LysR RD05_RS02285 IPR005119 LysR, substrate-binding RD05_RS02285 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02290 IPR002220 DapA-like RD05_RS02290 IPR013785 Aldolase-type TIM barrel RD05_RS02295 IPR001584 Integrase, catalytic core RD05_RS02295 IPR009057 Homeodomain-like RD05_RS02295 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02295 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02295 IPR012337 Ribonuclease H-like domain RD05_RS02295 IPR024967 DNA-binding domain, IS481-type RD05_RS02300 IPR002840 Domain of unknown function DUF126 RD05_RS02300 IPR008279 PEP-utilising enzyme, mobile domain RD05_RS02300 IPR012016 Uncharacterised protein family UPF0107 RD05_RS02300 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS02305 IPR007506 Domain of unknown function DUF521 RD05_RS02310 IPR005064 Bordetella uptake gene RD05_RS02315 IPR000847 Transcription regulator HTH, LysR RD05_RS02315 IPR005119 LysR, substrate-binding RD05_RS02315 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02320 IPR006094 FAD linked oxidase, N-terminal RD05_RS02320 IPR012256 D-lactate dehydrogenase RD05_RS02320 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal RD05_RS02320 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS02320 IPR016166 FAD-binding, type 2 RD05_RS02320 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS02320 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS02320 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 RD05_RS02320 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 RD05_RS02325 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS02325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02330 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02330 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02330 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS02330 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02335 IPR005064 Bordetella uptake gene RD05_RS02340 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD05_RS02340 IPR002933 Peptidase M20 RD05_RS02340 IPR010169 Acetylornithine deacetylase (ArgE) RD05_RS02340 IPR011650 Peptidase M20, dimerisation domain RD05_RS02345 IPR010430 Protein of unknown function DUF1028 RD05_RS02345 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS02350 IPR006175 YjgF/Yer057p/UK114 family RD05_RS02350 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS02360 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS02360 IPR011032 GroES (chaperonin 10)-like RD05_RS02360 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS02360 IPR014188 Acrylyl-CoA reductase AcuI RD05_RS02360 IPR016040 NAD(P)-binding domain RD05_RS02360 IPR020843 Polyketide synthase, enoylreductase RD05_RS02365 IPR000847 Transcription regulator HTH, LysR RD05_RS02365 IPR005119 LysR, substrate-binding RD05_RS02365 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02370 IPR003781 CoA-binding RD05_RS02370 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS02370 IPR016040 NAD(P)-binding domain RD05_RS02370 IPR016102 Succinyl-CoA synthetase-like RD05_RS02370 IPR032875 RD05_RS02370 RD05_RS02375 IPR001753 Crotonase superfamily RD05_RS02375 IPR029045 ClpP/crotonase-like domain RD05_RS02380 IPR015168 SsuA/THI5-like RD05_RS02385 IPR005064 Bordetella uptake gene RD05_RS02390 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD05_RS02390 IPR016040 NAD(P)-binding domain RD05_RS02395 IPR001347 Sugar isomerase (SIS) RD05_RS02395 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RD05_RS02395 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS02400 IPR000485 AsnC-type HTH domain RD05_RS02400 IPR011008 Dimeric alpha-beta barrel RD05_RS02400 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02400 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS02400 IPR019888 Transcription regulator AsnC-type RD05_RS02405 IPR002155 Thiolase RD05_RS02405 IPR016039 Thiolase-like RD05_RS02405 IPR020613 Thiolase, conserved site RD05_RS02405 IPR020616 Thiolase, N-terminal RD05_RS02405 IPR020617 Thiolase, C-terminal RD05_RS02410 IPR001753 Crotonase superfamily RD05_RS02410 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS02410 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS02410 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS02410 IPR013328 Dehydrogenase, multihelical RD05_RS02410 IPR016040 NAD(P)-binding domain RD05_RS02410 IPR029045 ClpP/crotonase-like domain RD05_RS02415 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS02415 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02415 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02415 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS02420 IPR005064 Bordetella uptake gene RD05_RS02425 IPR003781 CoA-binding RD05_RS02425 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS02425 IPR016040 NAD(P)-binding domain RD05_RS02425 IPR016102 Succinyl-CoA synthetase-like RD05_RS02425 IPR032875 RD05_RS02425 RD05_RS02430 IPR002020 Citrate synthase-like RD05_RS02430 IPR016142 Citrate synthase-like, large alpha subdomain RD05_RS02430 IPR016143 Citrate synthase-like, small alpha subdomain RD05_RS02435 IPR005471 Transcription regulator IclR, N-terminal RD05_RS02435 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02435 IPR014757 Transcription regulator IclR, C-terminal RD05_RS02435 IPR029016 GAF domain-like RD05_RS02440 IPR006656 Molybdopterin oxidoreductase RD05_RS02440 IPR006657 Molydopterin dinucleotide-binding domain RD05_RS02440 IPR009010 Aspartate decarboxylase-like domain RD05_RS02445 IPR001584 Integrase, catalytic core RD05_RS02445 IPR009057 Homeodomain-like RD05_RS02445 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02445 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02445 IPR012337 Ribonuclease H-like domain RD05_RS02445 IPR024967 DNA-binding domain, IS481-type RD05_RS02450 IPR001584 Integrase, catalytic core RD05_RS02450 IPR009057 Homeodomain-like RD05_RS02450 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02450 IPR012337 Ribonuclease H-like domain RD05_RS02450 IPR024967 DNA-binding domain, IS481-type RD05_RS02460 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RD05_RS02460 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RD05_RS02460 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RD05_RS02460 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RD05_RS02460 IPR016040 NAD(P)-binding domain RD05_RS02460 IPR018214 Glutamyl-tRNA reductase, conserved site RD05_RS02465 IPR000352 Peptide chain release factor class I/class II RD05_RS02465 IPR004373 Peptide chain release factor 1 RD05_RS02465 IPR005139 Peptide chain release factor RD05_RS02465 IPR014720 Double-stranded RNA-binding domain RD05_RS02470 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS02470 IPR004556 Modification methylase HemK RD05_RS02470 IPR007848 Methyltransferase small domain RD05_RS02470 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RD05_RS02470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS02475 IPR002109 Glutaredoxin RD05_RS02475 IPR004480 Monothiol glutaredoxin-related RD05_RS02475 IPR012336 Thioredoxin-like fold RD05_RS02475 IPR014434 Monothiol glutaredoxin RD05_RS02480 IPR003382 Flavoprotein RD05_RS02480 IPR004507 Decarboxylase UbiX/Pad1 RD05_RS02485 IPR005064 Bordetella uptake gene RD05_RS02490 IPR015168 SsuA/THI5-like RD05_RS02495 IPR002346 Molybdopterin dehydrogenase, FAD-binding RD05_RS02495 IPR005107 CO dehydrogenase flavoprotein, C-terminal RD05_RS02495 IPR016166 FAD-binding, type 2 RD05_RS02495 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS02495 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS02500 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS02500 IPR002888 [2Fe-2S]-binding RD05_RS02500 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS02500 IPR012675 Beta-grasp domain RD05_RS02505 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD05_RS02505 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD05_RS02510 IPR010419 Carbon monoxide dehydrogenase subunit G RD05_RS02510 IPR023393 START-like domain RD05_RS02520 IPR001584 Integrase, catalytic core RD05_RS02520 IPR009057 Homeodomain-like RD05_RS02520 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02520 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02520 IPR012337 Ribonuclease H-like domain RD05_RS02520 IPR024967 DNA-binding domain, IS481-type RD05_RS02525 IPR007730 Sporulation-related domain RD05_RS02525 IPR009009 RlpA-like double-psi beta-barrel domain RD05_RS02525 IPR012997 Rare lipoprotein A, bacterial RD05_RS02530 IPR005337 ATPase, P-loop-containing RD05_RS02530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02540 IPR009056 Cytochrome c-like domain RD05_RS02540 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit RD05_RS02545 IPR003755 HPr(Ser) kinase/phosphorylase RD05_RS02545 IPR011104 HPr kinase/phosphorylase, C-terminal RD05_RS02545 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal RD05_RS02545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02545 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like RD05_RS02550 IPR002178 PTS EIIA type-2 domain RD05_RS02550 IPR016152 Phosphotransferase/anion transporter RD05_RS02555 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RD05_RS02560 IPR003439 ABC transporter-like RD05_RS02560 IPR003593 AAA+ ATPase domain RD05_RS02560 IPR017871 ABC transporter, conserved site RD05_RS02560 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02560 IPR030921 RD05_RS02560 RD05_RS02560 IPR032823 RD05_RS02560 RD05_RS02565 IPR005653 Organic solvent tolerance-like, N-terminal RD05_RS02565 IPR014340 Lipopolysaccharide assembly, LptA RD05_RS02570 IPR010664 Lipopolysaccharide assembly, LptC-related RD05_RS02570 IPR026265 Lipopolysaccharide export system protein LptC RD05_RS02575 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RD05_RS02575 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase RD05_RS02575 IPR023214 HAD-like domain RD05_RS02580 IPR000644 CBS domain RD05_RS02580 IPR001347 Sugar isomerase (SIS) RD05_RS02580 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RD05_RS02585 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD05_RS02585 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD05_RS02585 IPR005862 Phosphoribosylglycinamide formyltransferase 2 RD05_RS02585 IPR011054 Rudiment single hybrid motif RD05_RS02585 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS02585 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS02585 IPR016185 Pre-ATP-grasp domain RD05_RS02590 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS02590 IPR012910 TonB-dependent receptor, plug RD05_RS02595 IPR001584 Integrase, catalytic core RD05_RS02595 IPR009057 Homeodomain-like RD05_RS02595 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02595 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02595 IPR012337 Ribonuclease H-like domain RD05_RS02595 IPR024967 DNA-binding domain, IS481-type RD05_RS02600 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RD05_RS02600 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RD05_RS02600 IPR012132 Glucose-methanol-choline oxidoreductase RD05_RS02600 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS02605 IPR009978 Protein of unknown function DUF1504 RD05_RS02610 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RD05_RS02615 IPR007462 Protein of unknown function DUF502 RD05_RS02620 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RD05_RS02620 IPR004115 GAD-like domain RD05_RS02620 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RD05_RS02620 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD05_RS02620 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type RD05_RS02620 IPR012340 Nucleic acid-binding, OB-fold RD05_RS02620 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RD05_RS02620 IPR029351 GAD domain RD05_RS02625 IPR005135 Endonuclease/exonuclease/phosphatase RD05_RS02630 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS02630 IPR025202 Phospholipase D-like domain RD05_RS02630 IPR030872 RD05_RS02630 RD05_RS02635 IPR000620 Drug/metabolite transporter RD05_RS02645 IPR010419 Carbon monoxide dehydrogenase subunit G RD05_RS02645 IPR023393 START-like domain RD05_RS02650 IPR001584 Integrase, catalytic core RD05_RS02650 IPR009057 Homeodomain-like RD05_RS02650 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02650 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02650 IPR012337 Ribonuclease H-like domain RD05_RS02650 IPR024967 DNA-binding domain, IS481-type RD05_RS02655 IPR000709 Leu/Ile/Val-binding protein RD05_RS02655 IPR028081 Leucine-binding protein domain RD05_RS02655 IPR028082 Periplasmic binding protein-like I RD05_RS02660 IPR000120 Amidase RD05_RS02660 IPR023631 Amidase signature domain RD05_RS02665 IPR010300 Cysteine dioxygenase type I RD05_RS02665 IPR011051 RmlC-like cupin domain RD05_RS02665 IPR014710 RmlC-like jelly roll fold RD05_RS02670 IPR005471 Transcription regulator IclR, N-terminal RD05_RS02670 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02670 IPR014757 Transcription regulator IclR, C-terminal RD05_RS02670 IPR029016 GAF domain-like RD05_RS02685 IPR001753 Crotonase superfamily RD05_RS02685 IPR029045 ClpP/crotonase-like domain RD05_RS02690 IPR007939 Copper resistance B precursor RD05_RS02695 IPR001117 Multicopper oxidase, type 1 RD05_RS02695 IPR002355 Multicopper oxidase, copper-binding site RD05_RS02695 IPR006376 Copper-resistance protein CopA RD05_RS02695 IPR008972 Cupredoxin RD05_RS02695 IPR011706 Multicopper oxidase, type 2 RD05_RS02695 IPR011707 Multicopper oxidase, type 3 RD05_RS02695 IPR033138 RD05_RS02695 RD05_RS02700 IPR000923 Blue (type 1) copper domain RD05_RS02700 IPR008972 Cupredoxin RD05_RS02700 IPR028871 Blue (type 1) copper protein, binding site RD05_RS02705 IPR001584 Integrase, catalytic core RD05_RS02705 IPR009057 Homeodomain-like RD05_RS02705 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02705 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02705 IPR012337 Ribonuclease H-like domain RD05_RS02705 IPR024967 DNA-binding domain, IS481-type RD05_RS02710 IPR001584 Integrase, catalytic core RD05_RS02710 IPR009057 Homeodomain-like RD05_RS02710 IPR012337 Ribonuclease H-like domain RD05_RS02710 IPR024967 DNA-binding domain, IS481-type RD05_RS02720 IPR001584 Integrase, catalytic core RD05_RS02720 IPR009057 Homeodomain-like RD05_RS02720 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02720 IPR012337 Ribonuclease H-like domain RD05_RS02720 IPR024967 DNA-binding domain, IS481-type RD05_RS02725 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS02725 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS02725 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS02725 IPR013328 Dehydrogenase, multihelical RD05_RS02725 IPR016040 NAD(P)-binding domain RD05_RS02725 IPR022694 3-hydroxyacyl-CoA dehydrogenase RD05_RS02730 IPR003673 CoA-transferase family III RD05_RS02730 IPR023606 CoA-transferase family III domain RD05_RS02735 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS02735 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02735 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02735 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS02735 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS02740 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS02740 IPR009057 Homeodomain-like RD05_RS02740 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS02740 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS02740 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS02745 IPR004136 2-nitropropane dioxygenase, NPD RD05_RS02745 IPR013785 Aldolase-type TIM barrel RD05_RS02750 IPR001753 Crotonase superfamily RD05_RS02750 IPR029045 ClpP/crotonase-like domain RD05_RS02755 IPR001753 Crotonase superfamily RD05_RS02755 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS02755 IPR029045 ClpP/crotonase-like domain RD05_RS02760 IPR000631 YjeF C-terminal domain RD05_RS02760 IPR017953 Carbohydrate kinase, predicted, conserved site RD05_RS02760 IPR029056 Ribokinase-like RD05_RS02775 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD05_RS02780 IPR000515 MetI-like domain RD05_RS02785 IPR000515 MetI-like domain RD05_RS02790 IPR003439 ABC transporter-like RD05_RS02790 IPR003593 AAA+ ATPase domain RD05_RS02790 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS02790 IPR017871 ABC transporter, conserved site RD05_RS02790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02795 IPR029058 Alpha/Beta hydrolase fold RD05_RS02800 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD05_RS02800 IPR002933 Peptidase M20 RD05_RS02800 IPR011650 Peptidase M20, dimerisation domain RD05_RS02800 IPR017150 Peptidase M20, glutamate carboxypeptidase RD05_RS02805 IPR001584 Integrase, catalytic core RD05_RS02805 IPR009057 Homeodomain-like RD05_RS02805 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02805 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02805 IPR012337 Ribonuclease H-like domain RD05_RS02805 IPR024967 DNA-binding domain, IS481-type RD05_RS02810 IPR000212 DNA helicase, UvrD/REP type RD05_RS02810 IPR005752 DNA helicase, ATP-dependent, RepA type RD05_RS02810 IPR013986 DExx box DNA helicase domain RD05_RS02810 IPR014016 UvrD-like Helicase, ATP-binding domain RD05_RS02810 IPR014017 DNA helicase, UvrD-like, C-terminal RD05_RS02810 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02815 IPR001650 Helicase, C-terminal RD05_RS02815 IPR005259 Primosomal protein n RD05_RS02815 IPR011545 DEAD/DEAH box helicase domain RD05_RS02815 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS02815 IPR024064 FdhE-like RD05_RS02815 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02820 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RD05_RS02820 IPR006361 Uroporphyrinogen decarboxylase HemE RD05_RS02825 IPR002197 DNA binding HTH domain, Fis-type RD05_RS02825 IPR009057 Homeodomain-like RD05_RS02830 IPR001469 ATPase, F1 complex, delta/epsilon subunit RD05_RS02830 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal RD05_RS02830 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain RD05_RS02835 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS02835 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RD05_RS02835 IPR003593 AAA+ ATPase domain RD05_RS02835 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD05_RS02835 IPR005722 ATPase, F1 complex, beta subunit RD05_RS02835 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD05_RS02835 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal RD05_RS02835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02840 IPR000131 ATPase, F1 complex, gamma subunit RD05_RS02840 IPR023632 ATPase, F1 complex, gamma subunit conserved site RD05_RS02840 IPR023633 ATPase, F1 complex, gamma subunit domain RD05_RS02845 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS02845 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RD05_RS02845 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD05_RS02845 IPR005294 ATPase, F1 complex, alpha subunit RD05_RS02845 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD05_RS02845 IPR023366 ATP synthase subunit alpha-like domain RD05_RS02845 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS02850 IPR000711 ATPase, OSCP/delta subunit RD05_RS02850 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RD05_RS02855 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast RD05_RS02855 IPR005864 ATPase, F0 complex, subunit B, bacterial RD05_RS02855 IPR028987 F-type ATP synthase subunit B-like, membrane domain RD05_RS02860 IPR000454 ATPase, F0 complex, subunit C RD05_RS02860 IPR002379 V-ATPase proteolipid subunit C-like domain RD05_RS02860 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast RD05_RS02860 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RD05_RS02865 IPR000568 ATPase, F0 complex, subunit A RD05_RS02865 IPR023011 ATPase, F0 complex, subunit A, active site RD05_RS02870 IPR005598 ATP synthase protein I RD05_RS02875 IPR010621 Domain of unknown function DUF1214 RD05_RS02880 IPR001584 Integrase, catalytic core RD05_RS02880 IPR009057 Homeodomain-like RD05_RS02880 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02880 IPR012337 Ribonuclease H-like domain RD05_RS02880 IPR024967 DNA-binding domain, IS481-type RD05_RS02885 IPR010679 Domain of unknown function DUF1254 RD05_RS02885 IPR023289 VPA0735-like domain RD05_RS02890 IPR001753 Crotonase superfamily RD05_RS02890 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS02890 IPR029045 ClpP/crotonase-like domain RD05_RS02895 IPR001478 PDZ domain RD05_RS02895 IPR007963 Peptidase M61, catalytic domain RD05_RS02895 IPR024191 Peptidase M61 RD05_RS02900 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD05_RS02900 IPR016040 NAD(P)-binding domain RD05_RS02900 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS02905 IPR006156 Dihydroneopterin aldolase RD05_RS02905 IPR006157 Dihydroneopterin aldolase/epimerase domain RD05_RS02910 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RD05_RS02910 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA RD05_RS02910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS02915 IPR001584 Integrase, catalytic core RD05_RS02915 IPR009057 Homeodomain-like RD05_RS02915 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02915 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02915 IPR012337 Ribonuclease H-like domain RD05_RS02915 IPR024967 DNA-binding domain, IS481-type RD05_RS02920 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD05_RS02920 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS02920 IPR016040 NAD(P)-binding domain RD05_RS02920 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD05_RS02925 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RD05_RS02925 IPR012336 Thioredoxin-like fold RD05_RS02925 IPR017937 Thioredoxin, conserved site RD05_RS02925 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RD05_RS02930 IPR002938 Monooxygenase, FAD-binding RD05_RS02930 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RD05_RS02930 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RD05_RS02930 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS02935 IPR005300 Lytic transglycosylase MltA RD05_RS02935 IPR009009 RlpA-like double-psi beta-barrel domain RD05_RS02935 IPR010611 3D domain RD05_RS02935 IPR026044 Membrane-bound lytic murein transglycosylase A RD05_RS02940 IPR007474 ApaG domain RD05_RS02940 IPR023065 Uncharacterised protein family ApaG RD05_RS02945 IPR000056 Ribulose-phosphate 3-epimerase-like RD05_RS02945 IPR011060 Ribulose-phosphate binding barrel RD05_RS02945 IPR013785 Aldolase-type TIM barrel RD05_RS02945 IPR026019 Ribulose-phosphate 3-epimerase RD05_RS02950 IPR006346 2-phosphoglycolate phosphatase, prokaryotic RD05_RS02950 IPR006439 HAD hydrolase, subfamily IA RD05_RS02950 IPR023198 Phosphoglycolate phosphatase, domain 2 RD05_RS02950 IPR023214 HAD-like domain RD05_RS02955 IPR005256 Anthranilate synthase component I, PabB-like RD05_RS02955 IPR005801 ADC synthase RD05_RS02955 IPR006805 Anthranilate synthase component I, N-terminal RD05_RS02955 IPR015890 Chorismate binding, C-terminal RD05_RS02955 IPR019999 Anthranilate synthase component I - like RD05_RS02960 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RD05_RS02960 IPR017926 Glutamine amidotransferase RD05_RS02960 IPR029062 Class I glutamine amidotransferase-like RD05_RS02965 IPR000312 Glycosyl transferase, family 3 RD05_RS02965 IPR005940 Anthranilate phosphoribosyl transferase RD05_RS02965 IPR017459 Glycosyl transferase family 3, N-terminal domain RD05_RS02970 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RD05_RS02970 IPR011060 Ribulose-phosphate binding barrel RD05_RS02970 IPR013785 Aldolase-type TIM barrel RD05_RS02970 IPR013798 Indole-3-glycerol phosphate synthase RD05_RS02975 IPR001584 Integrase, catalytic core RD05_RS02975 IPR009057 Homeodomain-like RD05_RS02975 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02975 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02975 IPR012337 Ribonuclease H-like domain RD05_RS02975 IPR024967 DNA-binding domain, IS481-type RD05_RS02985 IPR010621 Domain of unknown function DUF1214 RD05_RS02985 IPR010679 Domain of unknown function DUF1254 RD05_RS02985 IPR023289 VPA0735-like domain RD05_RS02990 IPR001584 Integrase, catalytic core RD05_RS02990 IPR009057 Homeodomain-like RD05_RS02990 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS02990 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS02990 IPR012337 Ribonuclease H-like domain RD05_RS02990 IPR024967 DNA-binding domain, IS481-type RD05_RS02995 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS02995 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS02995 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS03000 IPR000847 Transcription regulator HTH, LysR RD05_RS03000 IPR005119 LysR, substrate-binding RD05_RS03000 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03005 IPR002376 Formyl transferase, N-terminal RD05_RS03005 IPR002912 ACT domain RD05_RS03005 IPR004810 Formyltetrahydrofolate deformylase RD05_RS03010 IPR006076 FAD dependent oxidoreductase RD05_RS03010 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS03015 IPR002563 Flavin reductase-like, FMN-binding RD05_RS03015 IPR012349 FMN-binding split barrel RD05_RS03020 IPR000659 Pyridoxamine 5'-phosphate oxidase RD05_RS03020 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD05_RS03020 IPR012349 FMN-binding split barrel RD05_RS03020 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RD05_RS03020 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RD05_RS03025 IPR006840 ChaC-like protein RD05_RS03025 IPR013024 Butirosin biosynthesis, BtrG-like RD05_RS03030 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG RD05_RS03030 IPR011701 Major facilitator superfamily RD05_RS03030 IPR020846 Major facilitator superfamily domain RD05_RS03035 IPR000594 UBA/THIF-type NAD/FAD binding fold RD05_RS03035 IPR016040 NAD(P)-binding domain RD05_RS03040 IPR000524 Transcription regulator HTH, GntR RD05_RS03040 IPR011663 UbiC transcription regulator-associated RD05_RS03040 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03040 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS03045 IPR000873 AMP-dependent synthetase/ligase RD05_RS03045 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS03050 IPR005064 Bordetella uptake gene RD05_RS03055 IPR002347 Glucose/ribitol dehydrogenase RD05_RS03055 IPR016040 NAD(P)-binding domain RD05_RS03060 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS03060 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS03065 IPR001544 Aminotransferase, class IV RD05_RS03070 IPR005801 ADC synthase RD05_RS03070 IPR005802 Para-aminobenzoate synthase, component I RD05_RS03070 IPR015890 Chorismate binding, C-terminal RD05_RS03070 IPR019999 Anthranilate synthase component I - like RD05_RS03075 IPR003439 ABC transporter-like RD05_RS03075 IPR003593 AAA+ ATPase domain RD05_RS03075 IPR004602 UvrABC system subunit A RD05_RS03075 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS03075 IPR017871 ABC transporter, conserved site RD05_RS03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03085 IPR000847 Transcription regulator HTH, LysR RD05_RS03085 IPR005119 LysR, substrate-binding RD05_RS03085 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03090 IPR001173 Glycosyltransferase 2-like RD05_RS03090 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS03095 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS03095 IPR030678 RD05_RS03095 RD05_RS03100 IPR000515 MetI-like domain RD05_RS03105 IPR000620 Drug/metabolite transporter RD05_RS03110 IPR003439 ABC transporter-like RD05_RS03110 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03115 IPR000868 Isochorismatase-like RD05_RS03120 IPR008816 Glycine zipper 2TM domain RD05_RS03125 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS03125 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS03130 IPR005527 Septum formation topological specificity factor MinE RD05_RS03135 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RD05_RS03135 IPR010223 ATP binding protein MinD, bacterial-type RD05_RS03135 IPR025501 ATP binding protein MinD RD05_RS03135 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03140 IPR005526 Septum formation inhibitor MinC, C-terminal RD05_RS03140 IPR007874 Septum formation inhibitor MinC, N-terminal RD05_RS03140 IPR013033 Septum formation inhibitor MinC RD05_RS03140 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal RD05_RS03145 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RD05_RS03145 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS03145 IPR004514 Glutamine-tRNA synthetase RD05_RS03145 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RD05_RS03145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS03145 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RD05_RS03145 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RD05_RS03145 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain RD05_RS03145 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RD05_RS03145 IPR022861 Glutamine-tRNA ligase, bacterial RD05_RS03150 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RD05_RS03155 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RD05_RS03160 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS03160 IPR003660 HAMP linker domain RD05_RS03160 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS03160 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS03165 IPR001789 Signal transduction response regulator, receiver domain RD05_RS03165 IPR001867 Signal transduction response regulator, C-terminal RD05_RS03165 IPR011006 CheY-like superfamily RD05_RS03165 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03165 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS03175 IPR001584 Integrase, catalytic core RD05_RS03175 IPR009057 Homeodomain-like RD05_RS03175 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03175 IPR012337 Ribonuclease H-like domain RD05_RS03175 IPR024967 DNA-binding domain, IS481-type RD05_RS03180 IPR005064 Bordetella uptake gene RD05_RS03185 IPR007486 Protein of unknown function DUF533 RD05_RS03185 IPR029024 TerB-like RD05_RS03190 IPR003718 OsmC/Ohr family RD05_RS03190 IPR015946 K homology domain-like, alpha/beta RD05_RS03195 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS03195 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS03200 IPR002347 Glucose/ribitol dehydrogenase RD05_RS03200 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RD05_RS03200 IPR016040 NAD(P)-binding domain RD05_RS03205 IPR000189 Prokaryotic transglycosylase, active site RD05_RS03205 IPR008258 Lytic transglycosylase-like SLT domain RD05_RS03205 IPR018392 LysM domain RD05_RS03205 IPR023346 Lysozyme-like domain RD05_RS03210 IPR001279 Beta-lactamase-like RD05_RS03210 IPR017782 Hydroxyacylglutathione hydrolase RD05_RS03210 IPR032282 RD05_RS03210 RD05_RS03215 IPR013216 Methyltransferase type 11 RD05_RS03215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS03220 IPR002156 Ribonuclease H domain RD05_RS03220 IPR012337 Ribonuclease H-like domain RD05_RS03220 IPR022892 Ribonuclease H RD05_RS03225 IPR001584 Integrase, catalytic core RD05_RS03225 IPR009057 Homeodomain-like RD05_RS03225 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03225 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03225 IPR012337 Ribonuclease H-like domain RD05_RS03225 IPR024967 DNA-binding domain, IS481-type RD05_RS03230 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD05_RS03230 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD05_RS03230 IPR016039 Thiolase-like RD05_RS03235 IPR016039 Thiolase-like RD05_RS03240 IPR005804 Fatty acid desaturase, type 1 RD05_RS03255 IPR001584 Integrase, catalytic core RD05_RS03255 IPR009057 Homeodomain-like RD05_RS03255 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03255 IPR012337 Ribonuclease H-like domain RD05_RS03255 IPR024967 DNA-binding domain, IS481-type RD05_RS03260 IPR016040 NAD(P)-binding domain RD05_RS03265 IPR002539 MaoC-like domain RD05_RS03265 IPR029069 HotDog domain RD05_RS03270 IPR002155 Thiolase RD05_RS03270 IPR016039 Thiolase-like RD05_RS03270 IPR020617 Thiolase, C-terminal RD05_RS03275 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD05_RS03275 IPR012340 Nucleic acid-binding, OB-fold RD05_RS03275 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD05_RS03280 IPR001753 Crotonase superfamily RD05_RS03280 IPR014748 Crontonase, C-terminal RD05_RS03280 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS03280 IPR029045 ClpP/crotonase-like domain RD05_RS03285 IPR002347 Glucose/ribitol dehydrogenase RD05_RS03285 IPR016040 NAD(P)-binding domain RD05_RS03285 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS03290 IPR000709 Leu/Ile/Val-binding protein RD05_RS03290 IPR028081 Leucine-binding protein domain RD05_RS03290 IPR028082 Periplasmic binding protein-like I RD05_RS03295 IPR003439 ABC transporter-like RD05_RS03295 IPR003593 AAA+ ATPase domain RD05_RS03295 IPR017871 ABC transporter, conserved site RD05_RS03295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03295 IPR032823 RD05_RS03295 RD05_RS03300 IPR003439 ABC transporter-like RD05_RS03300 IPR003593 AAA+ ATPase domain RD05_RS03300 IPR017871 ABC transporter, conserved site RD05_RS03300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03305 IPR001851 ABC transporter, permease RD05_RS03310 IPR001851 ABC transporter, permease RD05_RS03315 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS03315 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS03315 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS03315 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS03315 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS03320 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS03320 IPR009057 Homeodomain-like RD05_RS03320 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS03320 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS03325 IPR000873 AMP-dependent synthetase/ligase RD05_RS03325 IPR028154 AMP-dependent ligase, C-terminal RD05_RS03330 IPR003673 CoA-transferase family III RD05_RS03330 IPR023606 CoA-transferase family III domain RD05_RS03335 IPR002347 Glucose/ribitol dehydrogenase RD05_RS03335 IPR016040 NAD(P)-binding domain RD05_RS03340 IPR001584 Integrase, catalytic core RD05_RS03340 IPR009057 Homeodomain-like RD05_RS03340 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03340 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03340 IPR012337 Ribonuclease H-like domain RD05_RS03340 IPR024967 DNA-binding domain, IS481-type RD05_RS03350 IPR002035 von Willebrand factor, type A RD05_RS03350 IPR006698 Thermus phage phiYS40, Orf56 RD05_RS03355 IPR007390 Sporulation stage V, protein R RD05_RS03360 IPR011701 Major facilitator superfamily RD05_RS03360 IPR020846 Major facilitator superfamily domain RD05_RS03365 IPR005656 MmgE/PrpD RD05_RS03370 IPR005064 Bordetella uptake gene RD05_RS03375 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD05_RS03375 IPR006395 Methylaspartate ammonia-lyase RD05_RS03375 IPR022662 Methylaspartate ammonia-lyase, C-terminal RD05_RS03375 IPR022665 Methylaspartate ammonia-lyase, N-terminal RD05_RS03375 IPR029017 Enolase N-terminal domain-like RD05_RS03375 IPR029065 Enolase C-terminal domain-like RD05_RS03380 IPR000524 Transcription regulator HTH, GntR RD05_RS03380 IPR011663 UbiC transcription regulator-associated RD05_RS03380 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03380 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS03390 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD05_RS03390 IPR011057 Mss4-like RD05_RS03395 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS03395 IPR012675 Beta-grasp domain RD05_RS03395 IPR018298 Adrenodoxin, iron-sulphur binding site RD05_RS03400 IPR000551 MerR-type HTH domain RD05_RS03400 IPR009061 DNA binding domain, putative RD05_RS03400 IPR015358 Transcription regulator MerR, DNA binding RD05_RS03405 IPR002669 Urease accessory protein UreD RD05_RS03410 IPR002026 Urease, gamma/gamma-beta subunit RD05_RS03410 IPR012010 Urease, gamma subunit RD05_RS03415 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RD05_RS03420 IPR002019 Urease, beta subunit RD05_RS03425 IPR005848 Urease, alpha subunit RD05_RS03425 IPR006680 Amidohydrolase 1 RD05_RS03425 IPR011059 Metal-dependent hydrolase, composite domain RD05_RS03425 IPR011612 Urease alpha-subunit, N-terminal domain RD05_RS03425 IPR017950 Urease active site RD05_RS03425 IPR029754 Urease nickel binding site RD05_RS03425 IPR032466 RD05_RS03425 RD05_RS03430 IPR004029 UreE urease accessory, N-terminal RD05_RS03430 IPR007864 Urease accessory protein UreE, C-terminal domain RD05_RS03430 IPR012406 Urease accessory protein UreE RD05_RS03435 IPR002639 Urease accessory protein UreF RD05_RS03440 IPR003495 CobW/HypB/UreG domain RD05_RS03440 IPR004400 Urease accessory protein UreG RD05_RS03440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03445 IPR001584 Integrase, catalytic core RD05_RS03445 IPR009057 Homeodomain-like RD05_RS03445 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03445 IPR012337 Ribonuclease H-like domain RD05_RS03445 IPR024967 DNA-binding domain, IS481-type RD05_RS03450 IPR009197 Microcystin LR degradation protein MlrC RD05_RS03450 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD05_RS03450 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD05_RS03460 IPR000515 MetI-like domain RD05_RS03465 IPR000515 MetI-like domain RD05_RS03470 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS03470 IPR030678 RD05_RS03470 RD05_RS03475 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD05_RS03475 IPR015590 Aldehyde dehydrogenase domain RD05_RS03475 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS03475 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS03475 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS03475 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS03480 IPR005814 Aminotransferase class-III RD05_RS03480 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS03480 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS03480 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS03485 IPR000524 Transcription regulator HTH, GntR RD05_RS03485 IPR004839 Aminotransferase, class I/classII RD05_RS03485 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03485 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS03485 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS03490 IPR001796 Dihydrofolate reductase domain RD05_RS03490 IPR012259 Dihydrofolate reductase RD05_RS03490 IPR017925 Dihydrofolate reductase conserved site RD05_RS03490 IPR024072 Dihydrofolate reductase-like domain RD05_RS03495 IPR000398 Thymidylate synthase RD05_RS03495 IPR020940 Thymidylate synthase, active site RD05_RS03495 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RD05_RS03500 IPR003718 OsmC/Ohr family RD05_RS03500 IPR015946 K homology domain-like, alpha/beta RD05_RS03505 IPR009078 Ferritin-like superfamily RD05_RS03505 IPR011566 Ubiquinone biosynthesis protein Coq7 RD05_RS03505 IPR012347 Ferritin-related RD05_RS03510 IPR000715 Glycosyl transferase, family 4 RD05_RS03515 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD05_RS03515 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS03515 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD05_RS03515 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD05_RS03515 IPR016040 NAD(P)-binding domain RD05_RS03515 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD05_RS03515 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RD05_RS03520 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD05_RS03520 IPR008089 Nucleotide sugar epimerase RD05_RS03520 IPR016040 NAD(P)-binding domain RD05_RS03525 IPR004268 Flagellin assembly, membrane protein MviN RD05_RS03530 IPR001296 Glycosyl transferase, family 1 RD05_RS03530 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS03535 IPR001962 Asparagine synthase RD05_RS03535 IPR006426 Asparagine synthase, glutamine-hydrolyzing RD05_RS03535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS03535 IPR017932 Glutamine amidotransferase type 2 domain RD05_RS03535 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS03540 IPR001296 Glycosyl transferase, family 1 RD05_RS03540 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS03550 IPR001296 Glycosyl transferase, family 1 RD05_RS03550 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS03555 IPR001672 Phosphoglucose isomerase (PGI) RD05_RS03555 IPR018189 Phosphoglucose isomerase, conserved site RD05_RS03555 IPR023096 Phosphoglucose isomerase, C-terminal RD05_RS03560 IPR005841 Alpha-D-phosphohexomutase superfamily RD05_RS03560 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD05_RS03560 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD05_RS03560 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD05_RS03560 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD05_RS03560 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD05_RS03560 IPR016066 Alpha-D-phosphohexomutase, conserved site RD05_RS03565 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS03565 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS03570 IPR004113 FAD-linked oxidase, C-terminal RD05_RS03570 IPR006094 FAD linked oxidase, N-terminal RD05_RS03570 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS03570 IPR016166 FAD-binding, type 2 RD05_RS03570 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS03570 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS03570 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS03575 IPR001789 Signal transduction response regulator, receiver domain RD05_RS03575 IPR001867 Signal transduction response regulator, C-terminal RD05_RS03575 IPR011006 CheY-like superfamily RD05_RS03575 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03580 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS03580 IPR003660 HAMP linker domain RD05_RS03580 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS03585 IPR000917 Sulfatase RD05_RS03585 IPR012160 Membrane sulfatase, HI1246-related RD05_RS03585 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD05_RS03585 IPR017850 Alkaline-phosphatase-like, core domain RD05_RS03590 IPR005959 Fumarylacetoacetase RD05_RS03590 IPR011234 Fumarylacetoacetase, C-terminal-related RD05_RS03590 IPR015377 Fumarylacetoacetase, N-terminal RD05_RS03595 IPR005708 Homogentisate 1,2-dioxygenase RD05_RS03595 IPR011051 RmlC-like cupin domain RD05_RS03595 IPR014710 RmlC-like jelly roll fold RD05_RS03595 IPR022950 Homogentisate 1,2-dioxygenase, bacterial RD05_RS03600 IPR000847 Transcription regulator HTH, LysR RD05_RS03600 IPR005119 LysR, substrate-binding RD05_RS03600 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03605 IPR021233 Protein of unknown function DUF2783 RD05_RS03610 IPR002938 Monooxygenase, FAD-binding RD05_RS03610 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS03615 IPR001279 Beta-lactamase-like RD05_RS03620 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RD05_RS03620 IPR010979 Ribosomal protein S13-like, H2TH RD05_RS03620 IPR012319 DNA glycosylase/AP lyase, catalytic domain RD05_RS03620 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RD05_RS03620 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RD05_RS03620 IPR020629 Formamidopyrimidine-DNA glycosylase RD05_RS03625 IPR011990 Tetratricopeptide-like helical domain RD05_RS03625 IPR019734 Tetratricopeptide repeat RD05_RS03630 IPR004565 Outer membrane lipoprotein LolB RD05_RS03630 IPR029046 Lipoprotein localisation LolA/LolB/LppX RD05_RS03635 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RD05_RS03635 IPR006204 GHMP kinase N-terminal domain RD05_RS03635 IPR013750 GHMP kinase, C-terminal domain RD05_RS03635 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS03635 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS03645 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RD05_RS03645 IPR005946 Ribose-phosphate diphosphokinase RD05_RS03645 IPR029057 Phosphoribosyltransferase-like RD05_RS03645 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RD05_RS03650 IPR001021 Ribosomal protein L25, long-form RD05_RS03650 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RD05_RS03650 IPR020055 Ribosomal protein L25, short-form RD05_RS03650 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RD05_RS03650 IPR020057 Ribosomal protein L25, beta domain RD05_RS03650 IPR029751 Ribosomal protein L25 RD05_RS03655 IPR001328 Peptidyl-tRNA hydrolase RD05_RS03655 IPR018171 Peptidyl-tRNA hydrolase, conserved site RD05_RS03660 IPR003675 CAAX amino terminal protease RD05_RS03665 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RD05_RS03665 IPR006073 GTP binding domain RD05_RS03665 IPR012675 Beta-grasp domain RD05_RS03665 IPR012676 TGS-like RD05_RS03665 IPR013029 Domain of unknown function DUF933 RD05_RS03665 IPR023192 TGS-like domain RD05_RS03665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03670 IPR002104 Integrase, catalytic RD05_RS03670 IPR004107 Integrase, SAM-like, N-terminal RD05_RS03670 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS03670 IPR013762 Integrase-like, catalytic core RD05_RS03670 IPR023109 Integrase/recombinase, N-terminal RD05_RS03670 IPR025166 Domain of unknown function DUF4102 RD05_RS03675 IPR003812 Fido domain RD05_RS03680 IPR006935 Helicase/UvrB domain RD05_RS03680 IPR011578 Restriction endonuclease, FokI, C-terminal/endonuclease I, core RD05_RS03680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03685 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class RD05_RS03685 IPR002941 DNA methylase N-4/N-6 RD05_RS03685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS03690 IPR003959 ATPase, AAA-type, core RD05_RS03690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03695 IPR001584 Integrase, catalytic core RD05_RS03695 IPR009057 Homeodomain-like RD05_RS03695 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03695 IPR012337 Ribonuclease H-like domain RD05_RS03695 IPR024967 DNA-binding domain, IS481-type RD05_RS03710 IPR000212 DNA helicase, UvrD/REP type RD05_RS03710 IPR014016 UvrD-like Helicase, ATP-binding domain RD05_RS03710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03715 IPR000212 DNA helicase, UvrD/REP type RD05_RS03715 IPR014017 DNA helicase, UvrD-like, C-terminal RD05_RS03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03720 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS03720 IPR013762 Integrase-like, catalytic core RD05_RS03720 IPR024456 Integrase catalytic domain, putative RD05_RS03725 IPR001584 Integrase, catalytic core RD05_RS03725 IPR009057 Homeodomain-like RD05_RS03725 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03725 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03725 IPR012337 Ribonuclease H-like domain RD05_RS03725 IPR024967 DNA-binding domain, IS481-type RD05_RS03730 IPR005546 Autotransporter beta-domain RD05_RS03730 IPR006315 Outer membrane autotransporter barrel RD05_RS03730 IPR011050 Pectin lyase fold/virulence factor RD05_RS03730 IPR012332 P22 tailspike C-terminal domain-like RD05_RS03730 IPR013425 Autotransporter-associated beta strand repeat RD05_RS03735 IPR011050 Pectin lyase fold/virulence factor RD05_RS03735 IPR012332 P22 tailspike C-terminal domain-like RD05_RS03735 IPR013425 Autotransporter-associated beta strand repeat RD05_RS03735 IPR024973 ESPR domain RD05_RS03740 IPR001867 Signal transduction response regulator, C-terminal RD05_RS03740 IPR011990 Tetratricopeptide-like helical domain RD05_RS03740 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03740 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS03750 IPR001584 Integrase, catalytic core RD05_RS03750 IPR009057 Homeodomain-like RD05_RS03750 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03750 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03750 IPR012337 Ribonuclease H-like domain RD05_RS03750 IPR024967 DNA-binding domain, IS481-type RD05_RS03755 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS03755 IPR009057 Homeodomain-like RD05_RS03755 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS03755 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS03755 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS03770 IPR001584 Integrase, catalytic core RD05_RS03770 IPR009057 Homeodomain-like RD05_RS03770 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03770 IPR012337 Ribonuclease H-like domain RD05_RS03770 IPR024967 DNA-binding domain, IS481-type RD05_RS03775 IPR000551 MerR-type HTH domain RD05_RS03775 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS03775 IPR009061 DNA binding domain, putative RD05_RS03775 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03775 IPR011051 RmlC-like cupin domain RD05_RS03775 IPR013096 Cupin 2, conserved barrel RD05_RS03775 IPR014710 RmlC-like jelly roll fold RD05_RS03780 IPR006076 FAD dependent oxidoreductase RD05_RS03780 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS03785 IPR008579 Domain of unknown function DUF861, cupin-3 RD05_RS03785 IPR011051 RmlC-like cupin domain RD05_RS03785 IPR014710 RmlC-like jelly roll fold RD05_RS03790 IPR000101 Gamma-glutamyltranspeptidase RD05_RS03790 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS03795 IPR005064 Bordetella uptake gene RD05_RS03800 IPR005950 Molybdenum ABC transporter, periplasmic binding protein RD05_RS03805 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD05_RS03810 IPR001584 Integrase, catalytic core RD05_RS03810 IPR009057 Homeodomain-like RD05_RS03810 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03810 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03810 IPR012337 Ribonuclease H-like domain RD05_RS03810 IPR024967 DNA-binding domain, IS481-type RD05_RS03815 IPR000485 AsnC-type HTH domain RD05_RS03815 IPR000524 Transcription regulator HTH, GntR RD05_RS03815 IPR011008 Dimeric alpha-beta barrel RD05_RS03815 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03815 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS03815 IPR019888 Transcription regulator AsnC-type RD05_RS03835 IPR025421 Protein of unknown function DUF4148 RD05_RS03845 IPR010852 Protein of unknown function DUF1470 RD05_RS03845 IPR021005 Zinc finger, CGNR RD05_RS03845 IPR023286 ABATE domain RD05_RS03850 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS03850 IPR000639 Epoxide hydrolase-like RD05_RS03850 IPR029058 Alpha/Beta hydrolase fold RD05_RS03855 IPR005950 Molybdenum ABC transporter, periplasmic binding protein RD05_RS03860 IPR000515 MetI-like domain RD05_RS03860 IPR011867 Molybdate ABC transporter, permease protein RD05_RS03865 IPR003439 ABC transporter-like RD05_RS03865 IPR003593 AAA+ ATPase domain RD05_RS03865 IPR005116 Transport-associated OB, type 1 RD05_RS03865 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS03865 IPR011868 Molybdate ABC transporter, ATP-binding protein RD05_RS03865 IPR017871 ABC transporter, conserved site RD05_RS03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03870 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS03870 IPR025202 Phospholipase D-like domain RD05_RS03875 IPR001584 Integrase, catalytic core RD05_RS03875 IPR009057 Homeodomain-like RD05_RS03875 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03875 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03875 IPR012337 Ribonuclease H-like domain RD05_RS03875 IPR024967 DNA-binding domain, IS481-type RD05_RS03880 IPR002043 Uracil-DNA glycosylase RD05_RS03880 IPR005122 Uracil-DNA glycosylase-like RD05_RS03880 IPR018085 Uracil-DNA glycosylase, active site RD05_RS03885 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD05_RS03885 IPR001650 Helicase, C-terminal RD05_RS03885 IPR011545 DEAD/DEAH box helicase domain RD05_RS03885 IPR012969 Fibrinogen binding protein RD05_RS03885 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS03890 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RD05_RS03890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS03895 IPR002646 Poly A polymerase, head domain RD05_RS03895 IPR012006 tRNA nucleotidyltransferase, proteobacteria RD05_RS03895 IPR032828 RD05_RS03895 RD05_RS03900 IPR008258 Lytic transglycosylase-like SLT domain RD05_RS03900 IPR008939 Lytic transglycosylase, superhelical U-shaped RD05_RS03900 IPR012289 Lytic transglycosylase, superhelical linker RD05_RS03900 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain RD05_RS03900 IPR023346 Lysozyme-like domain RD05_RS03905 IPR002698 5-formyltetrahydrofolate cyclo-ligase RD05_RS03905 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RD05_RS03910 IPR005828 General substrate transporter RD05_RS03910 IPR020846 Major facilitator superfamily domain RD05_RS03915 IPR000286 Histone deacetylase superfamily RD05_RS03915 IPR023801 Histone deacetylase domain RD05_RS03920 IPR000847 Transcription regulator HTH, LysR RD05_RS03920 IPR005119 LysR, substrate-binding RD05_RS03920 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS03925 IPR001584 Integrase, catalytic core RD05_RS03925 IPR009057 Homeodomain-like RD05_RS03925 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS03925 IPR012337 Ribonuclease H-like domain RD05_RS03925 IPR024967 DNA-binding domain, IS481-type RD05_RS03930 IPR003171 Methylenetetrahydrofolate reductase RD05_RS03930 IPR004620 5,10-methylenetetrahydrofolate reductase RD05_RS03930 IPR029041 FAD-linked oxidoreductase-like RD05_RS03935 IPR007165 Membrane protein of unknown function RD05_RS03940 IPR000043 Adenosylhomocysteinase RD05_RS03940 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD05_RS03940 IPR016040 NAD(P)-binding domain RD05_RS03940 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site RD05_RS03945 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS03950 IPR010710 Protein of unknown function DUF1289 RD05_RS03955 IPR002133 S-adenosylmethionine synthetase RD05_RS03955 IPR022628 S-adenosylmethionine synthetase, N-terminal RD05_RS03955 IPR022629 S-adenosylmethionine synthetase, central domain RD05_RS03955 IPR022630 S-adenosylmethionine synthetase, C-terminal RD05_RS03955 IPR022631 S-adenosylmethionine synthetase, conserved site RD05_RS03955 IPR022636 S-adenosylmethionine synthetase superfamily RD05_RS03960 IPR004960 Bacterial lipid A biosynthesis acyltransferase RD05_RS03965 IPR004960 Bacterial lipid A biosynthesis acyltransferase RD05_RS03970 IPR001653 Diaminopimelate epimerase, DapF RD05_RS03970 IPR018510 Diaminopimelate epimerase, active site RD05_RS03975 IPR007435 Protein of unknown function DUF484 RD05_RS03980 IPR002104 Integrase, catalytic RD05_RS03980 IPR004107 Integrase, SAM-like, N-terminal RD05_RS03980 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS03980 IPR011931 Tyrosine recombinase XerC RD05_RS03980 IPR013762 Integrase-like, catalytic core RD05_RS03980 IPR023009 Tyrosine recombinase XerC/XerD RD05_RS03980 IPR023109 Integrase/recombinase, N-terminal RD05_RS03985 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS03985 IPR012910 TonB-dependent receptor, plug RD05_RS03990 IPR011541 Nickel/cobalt transporter, high-affinity RD05_RS03995 IPR010412 Protein of unknown function DUF1007 RD05_RS04000 IPR006127 Periplasmic solute binding protein family RD05_RS04000 IPR006128 Adhesion lipoprotein RD05_RS04000 IPR006129 Adhesin B RD05_RS04005 IPR001626 ABC-3 RD05_RS04005 IPR029022 ABC transporter, BtuC-like RD05_RS04010 IPR003439 ABC transporter-like RD05_RS04010 IPR003593 AAA+ ATPase domain RD05_RS04010 IPR017871 ABC transporter, conserved site RD05_RS04010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04020 IPR002481 Ferric-uptake regulator RD05_RS04020 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04025 IPR003495 CobW/HypB/UreG domain RD05_RS04025 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RD05_RS04025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04030 IPR000962 Zinc finger, DksA/TraR C4-type RD05_RS04030 IPR012784 RNA polymerase-binding transcription factor DksA RD05_RS04030 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RD05_RS04035 IPR001353 Proteasome, subunit alpha/beta RD05_RS04035 IPR022281 ATP-dependent protease, HslV subunit RD05_RS04035 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS04040 IPR003593 AAA+ ATPase domain RD05_RS04040 IPR003959 ATPase, AAA-type, core RD05_RS04040 IPR004491 Heat shock protein HslU RD05_RS04040 IPR019489 Clp ATPase, C-terminal RD05_RS04040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04045 IPR021647 Copper binding periplasmic protein CusF RD05_RS04050 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like RD05_RS04050 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RD05_RS04055 IPR001584 Integrase, catalytic core RD05_RS04055 IPR009057 Homeodomain-like RD05_RS04055 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04055 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04055 IPR012337 Ribonuclease H-like domain RD05_RS04055 IPR024967 DNA-binding domain, IS481-type RD05_RS04060 IPR001584 Integrase, catalytic core RD05_RS04060 IPR009057 Homeodomain-like RD05_RS04060 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04060 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04060 IPR012337 Ribonuclease H-like domain RD05_RS04060 IPR024967 DNA-binding domain, IS481-type RD05_RS04065 IPR003680 Flavodoxin-like fold RD05_RS04065 IPR029039 Flavoprotein-like RD05_RS04070 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD05_RS04070 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS04070 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS04070 IPR013328 Dehydrogenase, multihelical RD05_RS04070 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD05_RS04070 IPR016040 NAD(P)-binding domain RD05_RS04070 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD05_RS04075 IPR000101 Gamma-glutamyltranspeptidase RD05_RS04075 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS04080 IPR002823 Protein of unknown function DUF112, transmembrane RD05_RS04085 IPR009936 Protein of unknown function DUF1468 RD05_RS04090 IPR001584 Integrase, catalytic core RD05_RS04090 IPR009057 Homeodomain-like RD05_RS04090 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04090 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04090 IPR012337 Ribonuclease H-like domain RD05_RS04090 IPR024967 DNA-binding domain, IS481-type RD05_RS04095 IPR001584 Integrase, catalytic core RD05_RS04095 IPR009057 Homeodomain-like RD05_RS04095 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04095 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04095 IPR012337 Ribonuclease H-like domain RD05_RS04095 IPR024967 DNA-binding domain, IS481-type RD05_RS04105 IPR007838 Cell division protein ZapA-like RD05_RS04115 IPR001584 Integrase, catalytic core RD05_RS04115 IPR009057 Homeodomain-like RD05_RS04115 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04115 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04115 IPR012337 Ribonuclease H-like domain RD05_RS04115 IPR024967 DNA-binding domain, IS481-type RD05_RS04120 IPR007497 Protein of unknown function DUF541 RD05_RS04125 IPR001640 Prolipoprotein diacylglyceryl transferase RD05_RS04130 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RD05_RS04130 IPR004404 Dihydroxy-acid dehydratase RD05_RS04130 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS04130 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RD05_RS04135 IPR002324 Cytochrome c, class ID RD05_RS04135 IPR009056 Cytochrome c-like domain RD05_RS04140 IPR002569 Peptide methionine sulphoxide reductase MsrA RD05_RS04140 IPR028427 Peptide methionine sulfoxide reductase RD05_RS04145 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS04145 IPR005956 4-hydroxyphenylpyruvate dioxygenase RD05_RS04145 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS04150 IPR000485 AsnC-type HTH domain RD05_RS04150 IPR011008 Dimeric alpha-beta barrel RD05_RS04150 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04150 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS04150 IPR019888 Transcription regulator AsnC-type RD05_RS04185 IPR003121 SWIB/MDM2 domain RD05_RS04185 IPR019835 SWIB domain RD05_RS04190 IPR002933 Peptidase M20 RD05_RS04190 IPR011650 Peptidase M20, dimerisation domain RD05_RS04190 IPR017439 Amidohydrolase RD05_RS04195 IPR002195 Dihydroorotase, conserved site RD05_RS04195 IPR004721 Dihydroorotase homodimeric type RD05_RS04195 IPR006680 Amidohydrolase 1 RD05_RS04195 IPR032466 RD05_RS04195 RD05_RS04200 IPR003439 ABC transporter-like RD05_RS04200 IPR003593 AAA+ ATPase domain RD05_RS04200 IPR017871 ABC transporter, conserved site RD05_RS04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04200 IPR032524 RD05_RS04200 RD05_RS04200 IPR032781 RD05_RS04200 RD05_RS04210 IPR003444 MraZ RD05_RS04210 IPR020603 MraZ domain RD05_RS04215 IPR002903 Ribosomal RNA small subunit methyltransferase H RD05_RS04215 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain RD05_RS04215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS04220 IPR011922 Cell division protein FtsL RD05_RS04225 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS04225 IPR005311 Penicillin-binding protein, dimerisation domain RD05_RS04225 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS04230 IPR000713 Mur ligase, N-terminal RD05_RS04230 IPR004101 Mur ligase, C-terminal RD05_RS04230 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RD05_RS04230 IPR005863 UDP-MurNAc-pentapeptide synthetase RD05_RS04230 IPR013221 Mur ligase, central RD05_RS04230 IPR018109 Folylpolyglutamate synthetase, conserved site RD05_RS04235 IPR000715 Glycosyl transferase, family 4 RD05_RS04235 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RD05_RS04235 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RD05_RS04240 IPR004101 Mur ligase, C-terminal RD05_RS04240 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RD05_RS04240 IPR013221 Mur ligase, central RD05_RS04240 IPR016040 NAD(P)-binding domain RD05_RS04240 IPR018109 Folylpolyglutamate synthetase, conserved site RD05_RS04245 IPR001182 Cell cycle protein FtsW/RodA RD05_RS04245 IPR013437 Cell division protein FtsW RD05_RS04250 IPR004276 Glycosyl transferase, family 28 RD05_RS04250 IPR006009 N-acetylglucosaminyltransferase, MurG RD05_RS04250 IPR007235 Glycosyl transferase, family 28, C-terminal RD05_RS04255 IPR000713 Mur ligase, N-terminal RD05_RS04255 IPR004101 Mur ligase, C-terminal RD05_RS04255 IPR005758 UDP-N-acetylmuramate-alanine ligase RD05_RS04255 IPR013221 Mur ligase, central RD05_RS04255 IPR016040 NAD(P)-binding domain RD05_RS04260 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RD05_RS04260 IPR005905 D-alanine--D-alanine ligase RD05_RS04260 IPR011095 D-alanine--D-alanine ligase, C-terminal RD05_RS04260 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RD05_RS04260 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS04260 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS04260 IPR016185 Pre-ATP-grasp domain RD05_RS04265 IPR005548 Cell division protein FtsQ/DivIB RD05_RS04265 IPR013685 Polypeptide-transport-associated, FtsQ-type RD05_RS04265 IPR026579 Cell division protein FtsQ RD05_RS04270 IPR003494 SHS2 domain inserted in FtsA RD05_RS04270 IPR020823 Cell division protein FtsA RD05_RS04275 IPR000158 Cell division protein FtsZ RD05_RS04275 IPR003008 Tubulin/FtsZ, GTPase domain RD05_RS04275 IPR008280 Tubulin/FtsZ, C-terminal RD05_RS04275 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RD05_RS04275 IPR024757 Cell division protein FtsZ, C-terminal RD05_RS04280 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RD05_RS04280 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RD05_RS04280 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RD05_RS04280 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS04285 IPR021136 Flagellar hook-length control protein-like, C-terminal RD05_RS04290 IPR011055 Duplicated hybrid motif RD05_RS04290 IPR016047 Peptidase M23 RD05_RS04295 IPR000185 Protein translocase subunit SecA RD05_RS04295 IPR004027 SEC-C motif RD05_RS04295 IPR011115 SecA DEAD-like, N-terminal RD05_RS04295 IPR011116 SecA Wing/Scaffold RD05_RS04295 IPR011130 SecA preprotein, cross-linking domain RD05_RS04295 IPR020937 SecA conserved site RD05_RS04295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04300 IPR025870 Glyoxalase-like domain RD05_RS04300 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS04305 IPR005064 Bordetella uptake gene RD05_RS04310 IPR010300 Cysteine dioxygenase type I RD05_RS04310 IPR011051 RmlC-like cupin domain RD05_RS04310 IPR014710 RmlC-like jelly roll fold RD05_RS04315 IPR002347 Glucose/ribitol dehydrogenase RD05_RS04315 IPR016040 NAD(P)-binding domain RD05_RS04320 IPR006076 FAD dependent oxidoreductase RD05_RS04320 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS04325 IPR000485 AsnC-type HTH domain RD05_RS04325 IPR011008 Dimeric alpha-beta barrel RD05_RS04325 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04325 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD05_RS04325 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS04325 IPR019888 Transcription regulator AsnC-type RD05_RS04330 IPR006840 ChaC-like protein RD05_RS04330 IPR013024 Butirosin biosynthesis, BtrG-like RD05_RS04335 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP RD05_RS04335 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RD05_RS04340 IPR001584 Integrase, catalytic core RD05_RS04340 IPR009057 Homeodomain-like RD05_RS04340 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04340 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04340 IPR012337 Ribonuclease H-like domain RD05_RS04340 IPR024967 DNA-binding domain, IS481-type RD05_RS04345 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RD05_RS04345 IPR011342 Shikimate dehydrogenase RD05_RS04345 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RD05_RS04345 IPR016040 NAD(P)-binding domain RD05_RS04345 IPR022893 Shikimate, quinate/shikimate dehydrogenase RD05_RS04350 IPR006260 TonB, C-terminal RD05_RS04355 IPR012340 Nucleic acid-binding, OB-fold RD05_RS04360 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RD05_RS04360 IPR029058 Alpha/Beta hydrolase fold RD05_RS04365 IPR000713 Mur ligase, N-terminal RD05_RS04365 IPR004101 Mur ligase, C-terminal RD05_RS04365 IPR005757 Murein peptide ligase RD05_RS04365 IPR013221 Mur ligase, central RD05_RS04365 IPR016040 NAD(P)-binding domain RD05_RS04370 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS04370 IPR012336 Thioredoxin-like fold RD05_RS04370 IPR017937 Thioredoxin, conserved site RD05_RS04375 IPR001874 Dehydroquinase, class II RD05_RS04375 IPR018509 Dehydroquinase, class II, conserved site RD05_RS04380 IPR000089 Biotin/lipoyl attachment RD05_RS04380 IPR001249 Acetyl-CoA biotin carboxyl carrier RD05_RS04380 IPR001882 Biotin-binding site RD05_RS04380 IPR011053 Single hybrid motif RD05_RS04385 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RD05_RS04385 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS04385 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD05_RS04385 IPR005482 Biotin carboxylase, C-terminal RD05_RS04385 IPR011054 Rudiment single hybrid motif RD05_RS04385 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS04385 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS04385 IPR016185 Pre-ATP-grasp domain RD05_RS04390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS04395 IPR011723 Zinc finger/thioredoxin putative RD05_RS04395 IPR021834 Protein of unknown function DUF3426 RD05_RS04400 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RD05_RS04400 IPR011611 Carbohydrate kinase PfkB RD05_RS04400 IPR029056 Ribokinase-like RD05_RS04405 IPR008816 Glycine zipper 2TM domain RD05_RS04410 IPR009081 Acyl carrier protein-like RD05_RS04415 IPR006998 DltD, C-terminal RD05_RS04425 IPR004299 Membrane bound O-acyl transferase, MBOAT RD05_RS04425 IPR024024 D-alanyl transfer protein DltB RD05_RS04425 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB RD05_RS04430 IPR000873 AMP-dependent synthetase/ligase RD05_RS04430 IPR020845 AMP-binding, conserved site RD05_RS04435 IPR003425 Uncharacterised protein family Ycf19 RD05_RS04440 IPR009970 Histone H1-like nucleoprotein HC2 RD05_RS04445 IPR000358 Ribonucleotide reductase small subunit RD05_RS04445 IPR009078 Ferritin-like superfamily RD05_RS04445 IPR012348 Ribonucleotide reductase-related RD05_RS04450 IPR000788 Ribonucleotide reductase large subunit, C-terminal RD05_RS04450 IPR005144 ATP-cone RD05_RS04450 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RD05_RS04450 IPR013346 Ribonucleotide reductase, class I , alpha subunit RD05_RS04450 IPR013509 Ribonucleotide reductase large subunit, N-terminal RD05_RS04455 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain RD05_RS04455 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS04455 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain RD05_RS04455 IPR029061 Thiamin diphosphate-binding fold RD05_RS04465 IPR000485 AsnC-type HTH domain RD05_RS04465 IPR011008 Dimeric alpha-beta barrel RD05_RS04465 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04465 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS04465 IPR019888 Transcription regulator AsnC-type RD05_RS04475 IPR011701 Major facilitator superfamily RD05_RS04475 IPR020846 Major facilitator superfamily domain RD05_RS04480 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RD05_RS04480 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS04480 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RD05_RS04480 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RD05_RS04480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS04480 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RD05_RS04480 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RD05_RS04480 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RD05_RS04485 IPR000182 GNAT domain RD05_RS04485 IPR016102 Succinyl-CoA synthetase-like RD05_RS04485 IPR016181 Acyl-CoA N-acyltransferase RD05_RS04485 IPR032875 RD05_RS04485 RD05_RS04490 IPR001584 Integrase, catalytic core RD05_RS04490 IPR009057 Homeodomain-like RD05_RS04490 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04490 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04490 IPR012337 Ribonuclease H-like domain RD05_RS04490 IPR024967 DNA-binding domain, IS481-type RD05_RS04495 IPR000524 Transcription regulator HTH, GntR RD05_RS04495 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS04495 IPR011711 GntR, C-terminal RD05_RS04495 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04505 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD05_RS04505 IPR001650 Helicase, C-terminal RD05_RS04505 IPR005580 DbpA, RNA-binding RD05_RS04505 IPR011545 DEAD/DEAH box helicase domain RD05_RS04505 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS04505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04510 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS04510 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS04515 IPR000868 Isochorismatase-like RD05_RS04520 IPR000515 MetI-like domain RD05_RS04525 IPR003439 ABC transporter-like RD05_RS04525 IPR003593 AAA+ ATPase domain RD05_RS04525 IPR017871 ABC transporter, conserved site RD05_RS04525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04535 IPR003140 Phospholipase/carboxylesterase/thioesterase RD05_RS04535 IPR029058 Alpha/Beta hydrolase fold RD05_RS04540 IPR006839 Ribosome-associated, YjgA RD05_RS04540 IPR023153 PSPTO4464-like domain RD05_RS04545 IPR002510 TldD/PmbA RD05_RS04550 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS04550 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD05_RS04555 IPR005822 Ribosomal protein L13 RD05_RS04555 IPR005823 Ribosomal protein L13, bacterial-type RD05_RS04555 IPR023564 Ribosomal protein L13 domain RD05_RS04560 IPR000754 Ribosomal protein S9 RD05_RS04560 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS04560 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS04560 IPR020574 Ribosomal protein S9, conserved site RD05_RS04560 IPR023035 Ribosomal protein S9, bacterial/plastid RD05_RS04565 IPR000534 Semialdehyde dehydrogenase, NAD-binding RD05_RS04565 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RD05_RS04565 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RD05_RS04565 IPR016040 NAD(P)-binding domain RD05_RS04565 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RD05_RS04575 IPR000361 FeS cluster biogenesis RD05_RS04575 IPR016092 FeS cluster insertion protein RD05_RS04575 IPR017870 FeS cluster insertion, C-terminal, conserved site RD05_RS04575 IPR023063 Iron-sulfur cluster insertion protein ErpA RD05_RS04580 IPR005338 Anhydro-N-acetylmuramic acid kinase RD05_RS04585 IPR011055 Duplicated hybrid motif RD05_RS04585 IPR016047 Peptidase M23 RD05_RS04590 IPR001584 Integrase, catalytic core RD05_RS04590 IPR009057 Homeodomain-like RD05_RS04590 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04590 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04590 IPR012337 Ribonuclease H-like domain RD05_RS04590 IPR024967 DNA-binding domain, IS481-type RD05_RS04595 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS04595 IPR002305 Aminoacyl-tRNA synthetase, class Ic RD05_RS04595 IPR002307 Tyrosine-tRNA ligase RD05_RS04595 IPR002942 RNA-binding S4 domain RD05_RS04595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS04595 IPR024088 Tyrosine-tRNA ligase, bacterial-type RD05_RS04595 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 RD05_RS04600 IPR005247 YbhB/YbcL RD05_RS04600 IPR008914 Phosphatidylethanolamine-binding protein PEBP RD05_RS04605 IPR001085 Serine hydroxymethyltransferase RD05_RS04605 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS04605 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS04605 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS04605 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RD05_RS04610 IPR003796 Ribonucleotide reductase regulator NrdR-like RD05_RS04610 IPR005144 ATP-cone RD05_RS04615 IPR002818 ThiJ/PfpI RD05_RS04615 IPR029062 Class I glutamine amidotransferase-like RD05_RS04620 IPR000868 Isochorismatase-like RD05_RS04625 IPR002125 CMP/dCMP deaminase, zinc-binding RD05_RS04625 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RD05_RS04625 IPR004794 Riboflavin biosynthesis protein RibD RD05_RS04625 IPR011549 Riboflavin-specific deaminase, C-terminal RD05_RS04625 IPR016192 APOBEC/CMP deaminase, zinc-binding RD05_RS04625 IPR016193 Cytidine deaminase-like RD05_RS04625 IPR024072 Dihydrofolate reductase-like domain RD05_RS04630 IPR001584 Integrase, catalytic core RD05_RS04630 IPR009057 Homeodomain-like RD05_RS04630 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04630 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04630 IPR012337 Ribonuclease H-like domain RD05_RS04630 IPR024967 DNA-binding domain, IS481-type RD05_RS04640 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS04640 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS04645 IPR029069 HotDog domain RD05_RS04650 IPR005064 Bordetella uptake gene RD05_RS04655 IPR000847 Transcription regulator HTH, LysR RD05_RS04655 IPR005119 LysR, substrate-binding RD05_RS04655 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04660 IPR003673 CoA-transferase family III RD05_RS04660 IPR023606 CoA-transferase family III domain RD05_RS04665 IPR011701 Major facilitator superfamily RD05_RS04665 IPR020846 Major facilitator superfamily domain RD05_RS04670 IPR000847 Transcription regulator HTH, LysR RD05_RS04670 IPR005119 LysR, substrate-binding RD05_RS04670 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04680 IPR003829 Pirin, N-terminal domain RD05_RS04680 IPR008778 Pirin, C-terminal domain RD05_RS04680 IPR011051 RmlC-like cupin domain RD05_RS04680 IPR012093 Pirin RD05_RS04680 IPR014710 RmlC-like jelly roll fold RD05_RS04685 IPR025714 Methyltransferase domain RD05_RS04685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS04690 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS04690 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS04690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS04695 IPR001789 Signal transduction response regulator, receiver domain RD05_RS04695 IPR002197 DNA binding HTH domain, Fis-type RD05_RS04695 IPR009057 Homeodomain-like RD05_RS04695 IPR011006 CheY-like superfamily RD05_RS04700 IPR002429 Cytochrome c oxidase subunit II C-terminal RD05_RS04700 IPR006333 Cytochrome o ubiquinol oxidase subunit II RD05_RS04700 IPR008972 Cupredoxin RD05_RS04700 IPR010514 COX aromatic rich motif RD05_RS04700 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RD05_RS04705 IPR000883 Cytochrome c oxidase subunit I RD05_RS04705 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RD05_RS04705 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD05_RS04705 IPR023616 Cytochrome c oxidase, subunit I domain RD05_RS04710 IPR000298 Cytochrome c oxidase subunit III domain RD05_RS04710 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD05_RS04710 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RD05_RS04710 IPR024791 Cytochrome c oxidase subunit III RD05_RS04715 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RD05_RS04715 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RD05_RS04720 IPR001845 HTH ArsR-type DNA-binding domain RD05_RS04720 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04730 IPR032808 RD05_RS04730 RD05_RS04735 IPR018640 Protein of unknown function DUF2063 RD05_RS04740 IPR007801 Uncharacterised protein family UPF0276 RD05_RS04740 IPR013022 Xylose isomerase-like, TIM barrel domain RD05_RS04745 IPR018740 Protein of unknown function DUF2282, integral membrane RD05_RS04750 IPR021333 Protein of unknown function DUF2946 RD05_RS04755 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS04755 IPR012910 TonB-dependent receptor, plug RD05_RS04760 IPR005625 PepSY-associated TM helix RD05_RS04765 IPR003370 Chromate transporter RD05_RS04765 IPR014047 Chromate transporter, long chain RD05_RS04770 IPR011055 Duplicated hybrid motif RD05_RS04770 IPR016047 Peptidase M23 RD05_RS04770 IPR018392 LysM domain RD05_RS04775 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS04780 IPR008457 Copper resistance D RD05_RS04785 IPR007551 Protein of unknown function DUF520 RD05_RS04790 IPR005297 Lipoprotein repeat RD05_RS04790 IPR014558 Uncharacterised conserved lipoprotein RD05_RS04795 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS04795 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04795 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS04795 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS04795 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS04795 IPR014284 RNA polymerase sigma-70 like domain RD05_RS04805 IPR001584 Integrase, catalytic core RD05_RS04805 IPR009057 Homeodomain-like RD05_RS04805 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04805 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04805 IPR012337 Ribonuclease H-like domain RD05_RS04805 IPR024967 DNA-binding domain, IS481-type RD05_RS04810 IPR001801 Histone-like protein H-NS RD05_RS04810 IPR027444 Histone-like protein H-NS, C-terminal domain RD05_RS04815 IPR001110 Uncharacterised protein family UPF0012, conserved site RD05_RS04815 IPR003010 Carbon-nitrogen hydrolase RD05_RS04820 IPR002510 TldD/PmbA RD05_RS04820 IPR025502 TldD RD05_RS04825 IPR006218 DAHP synthetase I/KDSA RD05_RS04825 IPR006219 DHAP synthase, class 1 RD05_RS04825 IPR013785 Aldolase-type TIM barrel RD05_RS04830 IPR008638 Filamentous haemagglutinin, N-terminal RD05_RS04830 IPR011050 Pectin lyase fold/virulence factor RD05_RS04830 IPR012334 Pectin lyase fold RD05_RS04830 IPR020974 Peptidase C80, RTX cysteine protease domain RD05_RS04830 IPR025157 Haemagluttinin repeat RD05_RS04835 IPR004113 FAD-linked oxidase, C-terminal RD05_RS04835 IPR006094 FAD linked oxidase, N-terminal RD05_RS04835 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS04835 IPR016166 FAD-binding, type 2 RD05_RS04835 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS04835 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS04835 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS04840 IPR004113 FAD-linked oxidase, C-terminal RD05_RS04840 IPR006094 FAD linked oxidase, N-terminal RD05_RS04840 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS04840 IPR016166 FAD-binding, type 2 RD05_RS04840 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS04840 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS04840 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS04845 IPR006094 FAD linked oxidase, N-terminal RD05_RS04845 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS04845 IPR016166 FAD-binding, type 2 RD05_RS04845 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS04845 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS04850 IPR004017 Cysteine-rich domain RD05_RS04850 IPR009051 Alpha-helical ferredoxin RD05_RS04850 IPR012257 Glycolate oxidase, iron-sulphur subunit RD05_RS04850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS04850 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS04855 IPR000801 Putative esterase RD05_RS04855 IPR029058 Alpha/Beta hydrolase fold RD05_RS04860 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS04860 IPR010105 TonB-dependent siderophore receptor RD05_RS04860 IPR010917 TonB-dependent receptor, conserved site RD05_RS04860 IPR012910 TonB-dependent receptor, plug RD05_RS04865 IPR009057 Homeodomain-like RD05_RS04865 IPR018060 DNA binding HTH domain, AraC-type RD05_RS04865 IPR018062 HTH domain AraC-type, conserved site RD05_RS04865 IPR020449 Transcription regulator HTH, AraC- type RD05_RS04870 IPR012136 NADP transhydrogenase, beta subunit RD05_RS04870 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS04875 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RD05_RS04875 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RD05_RS04875 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RD05_RS04875 IPR016040 NAD(P)-binding domain RD05_RS04880 IPR002508 Cell wall hydrolase/autolysin, catalytic RD05_RS04880 IPR007709 N-formylglutamate amidohydrolase RD05_RS04885 IPR005064 Bordetella uptake gene RD05_RS04890 IPR000847 Transcription regulator HTH, LysR RD05_RS04890 IPR005119 LysR, substrate-binding RD05_RS04890 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04895 IPR004506 tRNA-specific 2-thiouridylase RD05_RS04895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS04895 IPR023382 Adenine nucleotide alpha hydrolase-like domains RD05_RS04900 IPR002781 Transmembrane protein TauE like RD05_RS04905 IPR004045 Glutathione S-transferase, N-terminal RD05_RS04905 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS04905 IPR012336 Thioredoxin-like fold RD05_RS04910 IPR000362 Fumarate lyase family RD05_RS04910 IPR004769 Adenylosuccinate lyase RD05_RS04910 IPR008948 L-Aspartase-like RD05_RS04910 IPR013539 Adenylosuccinate lyase PurB, C-terminal RD05_RS04910 IPR020557 Fumarate lyase, conserved site RD05_RS04910 IPR022761 Fumarate lyase, N-terminal RD05_RS04910 IPR024083 Fumarase/histidase, N-terminal RD05_RS04915 IPR002321 Cytochrome c, class II RD05_RS04915 IPR010980 Cytochrome c/b562 RD05_RS04915 IPR012127 Cytochrome c prime RD05_RS04915 IPR015984 Cytochrome c prime, subgroup RD05_RS04920 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RD05_RS04920 IPR016174 Di-haem cytochrome, transmembrane RD05_RS04930 IPR021413 Protein of unknown function DUF3053 RD05_RS04935 IPR002549 Uncharacterised protein family UPF0118 RD05_RS04940 IPR001584 Integrase, catalytic core RD05_RS04940 IPR009057 Homeodomain-like RD05_RS04940 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS04940 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04940 IPR012337 Ribonuclease H-like domain RD05_RS04940 IPR024967 DNA-binding domain, IS481-type RD05_RS04945 IPR000524 Transcription regulator HTH, GntR RD05_RS04945 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS04945 IPR011711 GntR, C-terminal RD05_RS04945 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS04955 IPR000120 Amidase RD05_RS04955 IPR023631 Amidase signature domain RD05_RS04960 IPR003673 CoA-transferase family III RD05_RS04960 IPR023606 CoA-transferase family III domain RD05_RS04965 IPR001753 Crotonase superfamily RD05_RS04965 IPR014748 Crontonase, C-terminal RD05_RS04965 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS04965 IPR029045 ClpP/crotonase-like domain RD05_RS04975 IPR015168 SsuA/THI5-like RD05_RS04980 IPR000515 MetI-like domain RD05_RS04985 IPR003439 ABC transporter-like RD05_RS04985 IPR003593 AAA+ ATPase domain RD05_RS04985 IPR017871 ABC transporter, conserved site RD05_RS04985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS04990 IPR002509 Polysaccharide deacetylase RD05_RS04990 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS04995 IPR002347 Glucose/ribitol dehydrogenase RD05_RS04995 IPR016040 NAD(P)-binding domain RD05_RS05000 IPR005471 Transcription regulator IclR, N-terminal RD05_RS05000 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05000 IPR014757 Transcription regulator IclR, C-terminal RD05_RS05000 IPR029016 GAF domain-like RD05_RS05010 IPR000873 AMP-dependent synthetase/ligase RD05_RS05010 IPR020845 AMP-binding, conserved site RD05_RS05010 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS05015 IPR006175 YjgF/Yer057p/UK114 family RD05_RS05015 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS05020 IPR001851 ABC transporter, permease RD05_RS05025 IPR001851 ABC transporter, permease RD05_RS05035 IPR003439 ABC transporter-like RD05_RS05035 IPR003593 AAA+ ATPase domain RD05_RS05035 IPR017871 ABC transporter, conserved site RD05_RS05035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05040 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD05_RS05040 IPR013785 Aldolase-type TIM barrel RD05_RS05045 IPR001584 Integrase, catalytic core RD05_RS05045 IPR009057 Homeodomain-like RD05_RS05045 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05045 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05045 IPR012337 Ribonuclease H-like domain RD05_RS05045 IPR024967 DNA-binding domain, IS481-type RD05_RS05050 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD05_RS05050 IPR013785 Aldolase-type TIM barrel RD05_RS05055 IPR000847 Transcription regulator HTH, LysR RD05_RS05055 IPR005119 LysR, substrate-binding RD05_RS05055 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05060 IPR002110 Ankyrin repeat RD05_RS05060 IPR020683 Ankyrin repeat-containing domain RD05_RS05065 IPR002125 CMP/dCMP deaminase, zinc-binding RD05_RS05065 IPR016193 Cytidine deaminase-like RD05_RS05070 IPR011701 Major facilitator superfamily RD05_RS05070 IPR020846 Major facilitator superfamily domain RD05_RS05075 IPR000847 Transcription regulator HTH, LysR RD05_RS05075 IPR005119 LysR, substrate-binding RD05_RS05075 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05085 IPR001584 Integrase, catalytic core RD05_RS05085 IPR009057 Homeodomain-like RD05_RS05085 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05085 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05085 IPR012337 Ribonuclease H-like domain RD05_RS05085 IPR024967 DNA-binding domain, IS481-type RD05_RS05090 IPR000120 Amidase RD05_RS05090 IPR023631 Amidase signature domain RD05_RS05095 IPR001783 Lumazine-binding protein RD05_RS05095 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS05095 IPR023366 ATP synthase subunit alpha-like domain RD05_RS05095 IPR026017 Lumazine-binding domain RD05_RS05100 IPR005064 Bordetella uptake gene RD05_RS05105 IPR000485 AsnC-type HTH domain RD05_RS05105 IPR011008 Dimeric alpha-beta barrel RD05_RS05105 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05105 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS05105 IPR019888 Transcription regulator AsnC-type RD05_RS05110 IPR010300 Cysteine dioxygenase type I RD05_RS05110 IPR011051 RmlC-like cupin domain RD05_RS05110 IPR014710 RmlC-like jelly roll fold RD05_RS05115 IPR000873 AMP-dependent synthetase/ligase RD05_RS05115 IPR020845 AMP-binding, conserved site RD05_RS05115 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS05120 IPR021259 Protein of unknown function DUF2817 RD05_RS05125 IPR000515 MetI-like domain RD05_RS05130 IPR003439 ABC transporter-like RD05_RS05130 IPR003593 AAA+ ATPase domain RD05_RS05130 IPR017871 ABC transporter, conserved site RD05_RS05130 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05140 IPR003736 Phenylacetic acid degradation-related domain RD05_RS05140 IPR006683 Thioesterase superfamily RD05_RS05140 IPR029069 HotDog domain RD05_RS05145 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS05145 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD05_RS05145 IPR011032 GroES (chaperonin 10)-like RD05_RS05145 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS05145 IPR013154 Alcohol dehydrogenase GroES-like RD05_RS05145 IPR016040 NAD(P)-binding domain RD05_RS05145 IPR020843 Polyketide synthase, enoylreductase RD05_RS05150 IPR025870 Glyoxalase-like domain RD05_RS05150 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS05155 IPR008579 Domain of unknown function DUF861, cupin-3 RD05_RS05155 IPR011051 RmlC-like cupin domain RD05_RS05155 IPR014710 RmlC-like jelly roll fold RD05_RS05160 IPR001584 Integrase, catalytic core RD05_RS05160 IPR009057 Homeodomain-like RD05_RS05160 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05160 IPR012337 Ribonuclease H-like domain RD05_RS05160 IPR024967 DNA-binding domain, IS481-type RD05_RS05165 IPR001757 Cation-transporting P-type ATPase RD05_RS05165 IPR006121 Heavy metal-associated domain, HMA RD05_RS05165 IPR006122 Heavy metal-associated domain, copper ion-binding RD05_RS05165 IPR008250 P-type ATPase, A domain RD05_RS05165 IPR017969 Heavy-metal-associated, conserved site RD05_RS05165 IPR018303 P-type ATPase, phosphorylation site RD05_RS05165 IPR023214 HAD-like domain RD05_RS05165 IPR023299 P-type ATPase, cytoplasmic domain N RD05_RS05165 IPR027256 Cation-transporting P-type ATPase, subfamily IB RD05_RS05170 IPR003607 HD/PDEase domain RD05_RS05170 IPR006674 HD domain RD05_RS05175 IPR000796 Aspartate/other aminotransferase RD05_RS05175 IPR004839 Aminotransferase, class I/classII RD05_RS05175 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS05175 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS05180 IPR000847 Transcription regulator HTH, LysR RD05_RS05180 IPR005119 LysR, substrate-binding RD05_RS05180 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05185 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS05185 IPR029058 Alpha/Beta hydrolase fold RD05_RS05190 IPR011701 Major facilitator superfamily RD05_RS05190 IPR020846 Major facilitator superfamily domain RD05_RS05195 IPR002347 Glucose/ribitol dehydrogenase RD05_RS05195 IPR016040 NAD(P)-binding domain RD05_RS05195 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS05200 IPR002347 Glucose/ribitol dehydrogenase RD05_RS05200 IPR016040 NAD(P)-binding domain RD05_RS05200 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS05205 IPR001584 Integrase, catalytic core RD05_RS05205 IPR009057 Homeodomain-like RD05_RS05205 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05205 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05205 IPR012337 Ribonuclease H-like domain RD05_RS05205 IPR024967 DNA-binding domain, IS481-type RD05_RS05210 IPR001702 Porin, Gram-negative type RD05_RS05210 IPR002299 Porin, Neisseria sp. type RD05_RS05210 IPR023614 Porin domain RD05_RS05215 IPR003700 Ketopantoate hydroxymethyltransferase RD05_RS05215 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS05220 IPR000847 Transcription regulator HTH, LysR RD05_RS05220 IPR005119 LysR, substrate-binding RD05_RS05220 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05225 IPR001584 Integrase, catalytic core RD05_RS05225 IPR009057 Homeodomain-like RD05_RS05225 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05225 IPR012337 Ribonuclease H-like domain RD05_RS05225 IPR024967 DNA-binding domain, IS481-type RD05_RS05240 IPR001584 Integrase, catalytic core RD05_RS05240 IPR009057 Homeodomain-like RD05_RS05240 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05240 IPR012337 Ribonuclease H-like domain RD05_RS05240 IPR024967 DNA-binding domain, IS481-type RD05_RS05260 IPR002347 Glucose/ribitol dehydrogenase RD05_RS05260 IPR016040 NAD(P)-binding domain RD05_RS05265 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS05265 IPR009057 Homeodomain-like RD05_RS05265 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS05265 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS05265 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS05270 IPR001584 Integrase, catalytic core RD05_RS05270 IPR009057 Homeodomain-like RD05_RS05270 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05270 IPR012337 Ribonuclease H-like domain RD05_RS05270 IPR024967 DNA-binding domain, IS481-type RD05_RS05275 IPR007844 AsmA RD05_RS05280 IPR005019 Methyladenine glycosylase RD05_RS05280 IPR011257 DNA glycosylase RD05_RS05285 IPR000551 MerR-type HTH domain RD05_RS05285 IPR009061 DNA binding domain, putative RD05_RS05285 IPR010211 Redox-sensitive transcriptional activator SoxR RD05_RS05285 IPR015358 Transcription regulator MerR, DNA binding RD05_RS05295 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05295 IPR029016 GAF domain-like RD05_RS05305 IPR001584 Integrase, catalytic core RD05_RS05305 IPR009057 Homeodomain-like RD05_RS05305 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05305 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05305 IPR012337 Ribonuclease H-like domain RD05_RS05305 IPR024967 DNA-binding domain, IS481-type RD05_RS05310 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS05315 IPR003439 ABC transporter-like RD05_RS05315 IPR003593 AAA+ ATPase domain RD05_RS05315 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS05315 IPR017871 ABC transporter, conserved site RD05_RS05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05320 IPR000515 MetI-like domain RD05_RS05325 IPR000515 MetI-like domain RD05_RS05330 IPR005656 MmgE/PrpD RD05_RS05335 IPR005656 MmgE/PrpD RD05_RS05345 IPR005064 Bordetella uptake gene RD05_RS05350 IPR000524 Transcription regulator HTH, GntR RD05_RS05350 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS05350 IPR011711 GntR, C-terminal RD05_RS05350 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05355 IPR007506 Domain of unknown function DUF521 RD05_RS05360 IPR002840 Domain of unknown function DUF126 RD05_RS05360 IPR008279 PEP-utilising enzyme, mobile domain RD05_RS05360 IPR012016 Uncharacterised protein family UPF0107 RD05_RS05360 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS05365 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD05_RS05365 IPR011008 Dimeric alpha-beta barrel RD05_RS05370 IPR001584 Integrase, catalytic core RD05_RS05370 IPR009057 Homeodomain-like RD05_RS05370 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05370 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05370 IPR012337 Ribonuclease H-like domain RD05_RS05370 IPR024967 DNA-binding domain, IS481-type RD05_RS05375 IPR001670 Alcohol dehydrogenase, iron-type RD05_RS05375 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RD05_RS05380 IPR001584 Integrase, catalytic core RD05_RS05380 IPR009057 Homeodomain-like RD05_RS05380 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05380 IPR012337 Ribonuclease H-like domain RD05_RS05380 IPR024967 DNA-binding domain, IS481-type RD05_RS05390 IPR004872 Lipoprotein NlpA family RD05_RS05395 IPR000515 MetI-like domain RD05_RS05400 IPR003439 ABC transporter-like RD05_RS05400 IPR003593 AAA+ ATPase domain RD05_RS05400 IPR017871 ABC transporter, conserved site RD05_RS05400 IPR018449 NIL domain RD05_RS05400 IPR026253 Methionine import ATP-binding protein MetN RD05_RS05400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05405 IPR000322 Glycoside hydrolase, family 31 RD05_RS05405 IPR011013 Galactose mutarotase-like domain RD05_RS05405 IPR017853 Glycoside hydrolase, superfamily RD05_RS05415 IPR000760 Inositol monophosphatase RD05_RS05415 IPR020550 Inositol monophosphatase, conserved site RD05_RS05415 IPR020583 Inositol monophosphatase, metal-binding site RD05_RS05415 IPR022337 Inositol monophosphatase, SuhB RD05_RS05420 IPR001584 Integrase, catalytic core RD05_RS05420 IPR009057 Homeodomain-like RD05_RS05420 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05420 IPR012337 Ribonuclease H-like domain RD05_RS05420 IPR024967 DNA-binding domain, IS481-type RD05_RS05425 IPR000873 AMP-dependent synthetase/ligase RD05_RS05425 IPR020845 AMP-binding, conserved site RD05_RS05425 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS05430 IPR002933 Peptidase M20 RD05_RS05430 IPR011650 Peptidase M20, dimerisation domain RD05_RS05430 IPR017439 Amidohydrolase RD05_RS05435 IPR000847 Transcription regulator HTH, LysR RD05_RS05435 IPR005119 LysR, substrate-binding RD05_RS05435 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05440 IPR004630 Uncharacterised protein family UPF0324, bacteria RD05_RS05440 IPR018383 Uncharacterised protein family UPF0324, prokaryote RD05_RS05445 IPR006683 Thioesterase superfamily RD05_RS05445 IPR029069 HotDog domain RD05_RS05450 IPR000644 CBS domain RD05_RS05450 IPR006667 SLC41 divalent cation transporters, integral membrane domain RD05_RS05450 IPR006668 Magnesium transporter, MgtE intracellular domain RD05_RS05450 IPR006669 Magnesium transporter MgtE RD05_RS05455 IPR001584 Integrase, catalytic core RD05_RS05455 IPR009057 Homeodomain-like RD05_RS05455 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05455 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05455 IPR012337 Ribonuclease H-like domain RD05_RS05455 IPR024967 DNA-binding domain, IS481-type RD05_RS05460 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD05_RS05460 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS05465 IPR002656 Acyltransferase 3 RD05_RS05470 IPR005064 Bordetella uptake gene RD05_RS05475 IPR005471 Transcription regulator IclR, N-terminal RD05_RS05475 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05475 IPR014757 Transcription regulator IclR, C-terminal RD05_RS05475 IPR029016 GAF domain-like RD05_RS05480 IPR003761 Exonuclease VII, small subunit RD05_RS05485 IPR000092 Polyprenyl synthetase RD05_RS05485 IPR008949 Terpenoid synthase RD05_RS05485 IPR017446 Polyprenyl synthetase-related RD05_RS05490 IPR005474 Transketolase, N-terminal RD05_RS05490 IPR005475 Transketolase-like, pyrimidine-binding domain RD05_RS05490 IPR005477 Deoxyxylulose-5-phosphate synthase RD05_RS05490 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD05_RS05490 IPR020826 Transketolase binding site RD05_RS05490 IPR029061 Thiamin diphosphate-binding fold RD05_RS05490 IPR033247 RD05_RS05490 RD05_RS05490 IPR033248 RD05_RS05490 RD05_RS05495 IPR003801 GTP cyclohydrolase FolE2/MptA RD05_RS05495 IPR022838 GTP cyclohydrolase FolE2 RD05_RS05500 IPR000529 Ribosomal protein S6 RD05_RS05500 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RD05_RS05500 IPR020814 Ribosomal protein S6, plastid/chloroplast RD05_RS05505 IPR012340 Nucleic acid-binding, OB-fold RD05_RS05505 IPR023646 Primosomal replication protein PriB RD05_RS05510 IPR001648 Ribosomal protein S18 RD05_RS05510 IPR018275 Ribosomal protein S18, conserved site RD05_RS05515 IPR000244 Ribosomal protein L9 RD05_RS05515 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RD05_RS05515 IPR020069 Ribosomal protein L9, C-terminal RD05_RS05515 IPR020070 Ribosomal protein L9, N-terminal RD05_RS05515 IPR020594 Ribosomal protein L9, bacteria/chloroplast RD05_RS05520 IPR011009 Protein kinase-like domain RD05_RS05525 IPR003593 AAA+ ATPase domain RD05_RS05525 IPR007692 DNA helicase, DnaB type RD05_RS05525 IPR007693 DNA helicase, DnaB-like, N-terminal RD05_RS05525 IPR007694 DNA helicase, DnaB-like, C-terminal RD05_RS05525 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RD05_RS05525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05530 IPR016833 Putative sodium bile acid cotransporter RD05_RS05535 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA RD05_RS05535 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS05540 IPR002716 PIN domain RD05_RS05540 IPR003714 PhoH-like protein RD05_RS05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05540 IPR029060 PIN domain-like RD05_RS05545 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS05545 IPR012336 Thioredoxin-like fold RD05_RS05545 IPR024706 Peroxiredoxin, AhpC-type RD05_RS05550 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 RD05_RS05555 IPR004839 Aminotransferase, class I/classII RD05_RS05555 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS05555 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS05555 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS05560 IPR001342 Homoserine dehydrogenase, catalytic RD05_RS05560 IPR002912 ACT domain RD05_RS05560 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD05_RS05560 IPR016040 NAD(P)-binding domain RD05_RS05560 IPR016204 Homoserine dehydrogenase RD05_RS05560 IPR019811 Homoserine dehydrogenase, conserved site RD05_RS05565 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS05565 IPR004450 Threonine synthase-like RD05_RS05565 IPR029144 Threonine synthase, N-terminal RD05_RS05570 IPR010305 Protein of unknown function DUF903 RD05_RS05570 IPR010920 Like-Sm (LSM) domain RD05_RS05575 IPR001584 Integrase, catalytic core RD05_RS05575 IPR009057 Homeodomain-like RD05_RS05575 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05575 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05575 IPR012337 Ribonuclease H-like domain RD05_RS05575 IPR024967 DNA-binding domain, IS481-type RD05_RS05580 IPR003767 Malate/L-lactate dehydrogenase RD05_RS05590 IPR005064 Bordetella uptake gene RD05_RS05595 IPR001584 Integrase, catalytic core RD05_RS05595 IPR009057 Homeodomain-like RD05_RS05595 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05595 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05595 IPR012337 Ribonuclease H-like domain RD05_RS05595 IPR024967 DNA-binding domain, IS481-type RD05_RS05605 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD05_RS05605 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS05605 IPR017648 2-dehydro-3-deoxyglucarate aldolase, GarL RD05_RS05610 IPR002583 Ribosomal protein S20 RD05_RS05615 IPR006860 FecR protein RD05_RS05615 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD05_RS05615 IPR032623 RD05_RS05615 RD05_RS05620 IPR004268 Flagellin assembly, membrane protein MviN RD05_RS05625 IPR002347 Glucose/ribitol dehydrogenase RD05_RS05625 IPR016040 NAD(P)-binding domain RD05_RS05625 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS05630 IPR000850 Adenylate kinase/UMP-CMP kinase RD05_RS05630 IPR006259 Adenylate kinase subfamily RD05_RS05630 IPR007862 Adenylate kinase, active site lid domain RD05_RS05630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05635 IPR003329 Acylneuraminate cytidylyltransferase RD05_RS05635 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RD05_RS05635 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS05640 IPR005651 Uncharacterised protein family UPF0434/Trm112 RD05_RS05645 IPR003758 Tetraacyldisaccharide 4'-kinase RD05_RS05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05650 IPR003400 Biopolymer transport protein ExbD/TolR RD05_RS05655 IPR002898 MotA/TolQ/ExbB proton channel RD05_RS05660 IPR001584 Integrase, catalytic core RD05_RS05660 IPR009057 Homeodomain-like RD05_RS05660 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05660 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05660 IPR012337 Ribonuclease H-like domain RD05_RS05660 IPR024967 DNA-binding domain, IS481-type RD05_RS05665 IPR003753 Exonuclease VII, large subunit RD05_RS05665 IPR020579 Exonuclease VII, large subunit, C-terminal RD05_RS05665 IPR025824 OB-fold nucleic acid binding domain RD05_RS05670 IPR001189 Manganese/iron superoxide dismutase RD05_RS05670 IPR019831 Manganese/iron superoxide dismutase, N-terminal RD05_RS05670 IPR019832 Manganese/iron superoxide dismutase, C-terminal RD05_RS05670 IPR019833 Manganese/iron superoxide dismutase, binding site RD05_RS05675 IPR001807 Chloride channel, voltage gated RD05_RS05675 IPR014743 Chloride channel, core RD05_RS05680 IPR002155 Thiolase RD05_RS05680 IPR012793 Beta-ketoadipyl CoA thiolase RD05_RS05680 IPR016039 Thiolase-like RD05_RS05680 IPR020610 Thiolase, active site RD05_RS05680 IPR020613 Thiolase, conserved site RD05_RS05680 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS05680 IPR020616 Thiolase, N-terminal RD05_RS05680 IPR020617 Thiolase, C-terminal RD05_RS05685 IPR003795 Protein of unknown function DUF192 RD05_RS05690 IPR002059 Cold-shock protein, DNA-binding RD05_RS05690 IPR011129 Cold shock protein RD05_RS05690 IPR012156 Cold shock, CspA RD05_RS05690 IPR012340 Nucleic acid-binding, OB-fold RD05_RS05690 IPR019844 Cold-shock conserved site RD05_RS05695 IPR003769 Adaptor protein ClpS, core RD05_RS05695 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RD05_RS05695 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RD05_RS05700 IPR001599 Alpha-2-macroglobulin RD05_RS05700 IPR002890 Alpha-2-macroglobulin, N-terminal RD05_RS05700 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RD05_RS05700 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RD05_RS05700 IPR011626 Alpha-macroglobulin complement component RD05_RS05700 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming RD05_RS05700 IPR021868 Alpha-2-macroglobulin MG1 domain RD05_RS05700 IPR026284 Alpha-2-macroglobulin domain protein, bacteria RD05_RS05705 IPR001264 Glycosyl transferase, family 51 RD05_RS05705 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS05705 IPR009647 Penicillin-binding, C-terminal RD05_RS05705 IPR011815 Penicillin-binding protein 1C RD05_RS05705 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS05705 IPR023346 Lysozyme-like domain RD05_RS05710 IPR001270 ClpA/B family RD05_RS05710 IPR003593 AAA+ ATPase domain RD05_RS05710 IPR003959 ATPase, AAA-type, core RD05_RS05710 IPR004176 Clp, N-terminal RD05_RS05710 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA RD05_RS05710 IPR018368 ClpA/B, conserved site 1 RD05_RS05710 IPR019489 Clp ATPase, C-terminal RD05_RS05710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05710 IPR028299 ClpA/B, conserved site 2 RD05_RS05715 IPR005219 Conserved hypothetical protein CHP00155 RD05_RS05715 IPR007498 Paraquat-inducible protein A RD05_RS05720 IPR003399 Mammalian cell entry-related RD05_RS05725 IPR005586 Protein of unknown function DUF330 RD05_RS05730 IPR002872 Proline dehydrogenase domain RD05_RS05730 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 RD05_RS05730 IPR010985 Ribbon-helix-helix RD05_RS05730 IPR015590 Aldehyde dehydrogenase domain RD05_RS05730 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS05730 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS05730 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS05730 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS05730 IPR024082 Proline dehydrogenase PutA, domain II RD05_RS05730 IPR024089 Proline dehydrogenase PutA, domain I/II RD05_RS05730 IPR024090 Proline dehydrogenase PutA, domain I RD05_RS05730 IPR025703 Bifunctional protein PutA RD05_RS05730 IPR029041 FAD-linked oxidoreductase-like RD05_RS05735 IPR001584 Integrase, catalytic core RD05_RS05735 IPR009057 Homeodomain-like RD05_RS05735 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05735 IPR012337 Ribonuclease H-like domain RD05_RS05735 IPR024967 DNA-binding domain, IS481-type RD05_RS05740 IPR000709 Leu/Ile/Val-binding protein RD05_RS05740 IPR028081 Leucine-binding protein domain RD05_RS05740 IPR028082 Periplasmic binding protein-like I RD05_RS05745 IPR001851 ABC transporter, permease RD05_RS05750 IPR001851 ABC transporter, permease RD05_RS05755 IPR003439 ABC transporter-like RD05_RS05755 IPR003593 AAA+ ATPase domain RD05_RS05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05755 IPR032823 RD05_RS05755 RD05_RS05760 IPR003439 ABC transporter-like RD05_RS05760 IPR003593 AAA+ ATPase domain RD05_RS05760 IPR017871 ABC transporter, conserved site RD05_RS05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS05760 IPR030660 RD05_RS05760 RD05_RS05765 IPR011701 Major facilitator superfamily RD05_RS05765 IPR020846 Major facilitator superfamily domain RD05_RS05770 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS05770 IPR009057 Homeodomain-like RD05_RS05770 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS05770 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS05780 IPR003991 Pertactin virulence factor family RD05_RS05780 IPR003992 Pertactin RD05_RS05780 IPR004899 Pertactin, central region RD05_RS05780 IPR005546 Autotransporter beta-domain RD05_RS05780 IPR006315 Outer membrane autotransporter barrel RD05_RS05780 IPR011050 Pectin lyase fold/virulence factor RD05_RS05780 IPR012332 P22 tailspike C-terminal domain-like RD05_RS05790 IPR002187 Nitrogen regulatory protein PII RD05_RS05790 IPR002332 Nitrogen regulatory protein P-II, urydylation site RD05_RS05790 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD05_RS05790 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD05_RS05795 IPR007475 Membrane fusogenic activity RD05_RS05810 IPR005828 General substrate transporter RD05_RS05810 IPR005829 Sugar transporter, conserved site RD05_RS05810 IPR020846 Major facilitator superfamily domain RD05_RS05820 IPR000883 Cytochrome c oxidase subunit I RD05_RS05820 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RD05_RS05820 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD05_RS05820 IPR023616 Cytochrome c oxidase, subunit I domain RD05_RS05825 IPR000298 Cytochrome c oxidase subunit III domain RD05_RS05825 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD05_RS05825 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RD05_RS05825 IPR024791 Cytochrome c oxidase subunit III RD05_RS05830 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RD05_RS05830 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RD05_RS05835 IPR002994 Surfeit locus 1/Shy1 RD05_RS05840 IPR002347 Glucose/ribitol dehydrogenase RD05_RS05840 IPR016040 NAD(P)-binding domain RD05_RS05845 IPR002508 Cell wall hydrolase/autolysin, catalytic RD05_RS05845 IPR007709 N-formylglutamate amidohydrolase RD05_RS05845 IPR010247 N-formylglutamate deformylase RD05_RS05850 IPR001584 Integrase, catalytic core RD05_RS05850 IPR009057 Homeodomain-like RD05_RS05850 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05850 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05850 IPR012337 Ribonuclease H-like domain RD05_RS05850 IPR024967 DNA-binding domain, IS481-type RD05_RS05855 IPR001584 Integrase, catalytic core RD05_RS05855 IPR009057 Homeodomain-like RD05_RS05855 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05855 IPR012337 Ribonuclease H-like domain RD05_RS05855 IPR024967 DNA-binding domain, IS481-type RD05_RS05860 IPR000551 MerR-type HTH domain RD05_RS05860 IPR009061 DNA binding domain, putative RD05_RS05860 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator RD05_RS05865 IPR001757 Cation-transporting P-type ATPase RD05_RS05865 IPR006121 Heavy metal-associated domain, HMA RD05_RS05865 IPR008250 P-type ATPase, A domain RD05_RS05865 IPR018303 P-type ATPase, phosphorylation site RD05_RS05865 IPR023214 HAD-like domain RD05_RS05865 IPR023299 P-type ATPase, cytoplasmic domain N RD05_RS05865 IPR027256 Cation-transporting P-type ATPase, subfamily IB RD05_RS05870 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS05870 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS05875 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS05875 IPR009057 Homeodomain-like RD05_RS05875 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS05875 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS05880 IPR025421 Protein of unknown function DUF4148 RD05_RS05885 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RD05_RS05885 IPR006638 Elongator protein 3/MiaB/NifB RD05_RS05885 IPR007197 Radical SAM RD05_RS05885 IPR010722 Biotin and thiamin synthesis-associated domain RD05_RS05885 IPR013785 Aldolase-type TIM barrel RD05_RS05885 IPR024177 Biotin synthase RD05_RS05895 IPR011701 Major facilitator superfamily RD05_RS05895 IPR020846 Major facilitator superfamily domain RD05_RS05900 IPR012336 Thioredoxin-like fold RD05_RS05900 IPR013740 Redoxin RD05_RS05910 IPR002925 Dienelactone hydrolase RD05_RS05910 IPR029058 Alpha/Beta hydrolase fold RD05_RS05915 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD05_RS05915 IPR008023 Protein of unknown function DUF748 RD05_RS05920 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RD05_RS05920 IPR023045 Molybdenum cofactor biosynthesis C RD05_RS05920 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type RD05_RS05925 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RD05_RS05925 IPR012675 Beta-grasp domain RD05_RS05925 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD05_RS05930 IPR003448 Molybdopterin biosynthesis MoaE RD05_RS05935 IPR001453 Molybdopterin binding domain RD05_RS05935 IPR012245 Molybdenum cofactor biosynthesis protein MoaB RD05_RS05935 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria RD05_RS05940 IPR001453 Molybdopterin binding domain RD05_RS05940 IPR005110 MoeA, N-terminal and linker domain RD05_RS05940 IPR005111 MoeA, C-terminal, domain IV RD05_RS05940 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD05_RS05945 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site RD05_RS05945 IPR006638 Elongator protein 3/MiaB/NifB RD05_RS05945 IPR007197 Radical SAM RD05_RS05945 IPR010505 Molybdenum cofactor synthesis C-terminal RD05_RS05945 IPR013483 Molybdenum cofactor biosynthesis protein A RD05_RS05945 IPR013785 Aldolase-type TIM barrel RD05_RS05950 IPR000847 Transcription regulator HTH, LysR RD05_RS05950 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05950 IPR024370 PBP domain RD05_RS05955 IPR001584 Integrase, catalytic core RD05_RS05955 IPR009057 Homeodomain-like RD05_RS05955 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS05955 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS05955 IPR012337 Ribonuclease H-like domain RD05_RS05955 IPR024967 DNA-binding domain, IS481-type RD05_RS05960 IPR000415 Nitroreductase-like RD05_RS05960 IPR026021 Putative NAD(P)H nitroreductase YdjA-like RD05_RS05960 IPR029479 Nitroreductase RD05_RS05965 IPR000362 Fumarate lyase family RD05_RS05965 IPR008948 L-Aspartase-like RD05_RS05965 IPR009049 Argininosuccinate lyase RD05_RS05965 IPR020557 Fumarate lyase, conserved site RD05_RS05965 IPR022761 Fumarate lyase, N-terminal RD05_RS05965 IPR024083 Fumarase/histidase, N-terminal RD05_RS05965 IPR029419 Argininosuccinate lyase, C-terminal RD05_RS05970 IPR006685 Mechanosensitive ion channel MscS RD05_RS05970 IPR010920 Like-Sm (LSM) domain RD05_RS05970 IPR030192 RD05_RS05970 RD05_RS05975 IPR003010 Carbon-nitrogen hydrolase RD05_RS05975 IPR003694 NAD(+) synthetase RD05_RS05975 IPR014445 Glutamine-dependent NAD(+) synthetase RD05_RS05975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS05975 IPR022310 NAD/GMP synthase RD05_RS05980 IPR002187 Nitrogen regulatory protein PII RD05_RS05980 IPR002332 Nitrogen regulatory protein P-II, urydylation site RD05_RS05980 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD05_RS05980 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD05_RS05980 IPR017918 Nitrogen regulatory protein PII, conserved site RD05_RS05985 IPR004260 Pyrimidine dimer DNA glycosylase RD05_RS05985 IPR021143 Pyrimidine dimer DNA glycosylase, endonuclease V type RD05_RS05985 IPR024796 T4 endonuclease V RD05_RS06005 IPR000847 Transcription regulator HTH, LysR RD05_RS06005 IPR005119 LysR, substrate-binding RD05_RS06005 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06010 IPR000101 Gamma-glutamyltranspeptidase RD05_RS06010 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS06015 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS06015 IPR030678 RD05_RS06015 RD05_RS06020 IPR000515 MetI-like domain RD05_RS06025 IPR000515 MetI-like domain RD05_RS06025 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS06030 IPR004881 Ribosome biogenesis GTPase RsgA, putative RD05_RS06030 IPR010914 EngC GTPase RD05_RS06030 IPR012340 Nucleic acid-binding, OB-fold RD05_RS06030 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06035 IPR001915 Peptidase M48 RD05_RS06035 IPR027057 CAAX prenyl protease 1 RD05_RS06035 IPR032456 RD05_RS06035 RD05_RS06040 IPR012337 Ribonuclease H-like domain RD05_RS06040 IPR013520 Exonuclease, RNase T/DNA polymerase III RD05_RS06040 IPR022894 Oligoribonuclease RD05_RS06045 IPR004443 YjeF N-terminal domain RD05_RS06050 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX RD05_RS06050 IPR012906 PaaX-like, N-terminal RD05_RS06050 IPR013225 PaaX-like, C-terminal RD05_RS06055 IPR007814 Phenylacetic acid catabolic RD05_RS06055 IPR009078 Ferritin-like superfamily RD05_RS06055 IPR011881 Phenylacetate-CoA oxygenase, PaaG subunit RD05_RS06055 IPR012347 Ferritin-related RD05_RS06060 IPR009359 Phenylacetic acid degradation B RD05_RS06065 IPR007814 Phenylacetic acid catabolic RD05_RS06065 IPR009078 Ferritin-like superfamily RD05_RS06065 IPR011882 Phenylacetate-CoA oxygenase, PaaI subunit RD05_RS06065 IPR012347 Ferritin-related RD05_RS06070 IPR002744 Domain of unknown function DUF59 RD05_RS06070 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit RD05_RS06075 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS06075 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS06075 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS06075 IPR001834 NADH:cytochrome b5 reductase (CBR) RD05_RS06075 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS06075 IPR008333 Oxidoreductase, FAD-binding domain RD05_RS06075 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit RD05_RS06075 IPR012675 Beta-grasp domain RD05_RS06075 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS06080 IPR001584 Integrase, catalytic core RD05_RS06080 IPR009057 Homeodomain-like RD05_RS06080 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06080 IPR012337 Ribonuclease H-like domain RD05_RS06080 IPR024967 DNA-binding domain, IS481-type RD05_RS06085 IPR011975 Phenylacetic acid degradation protein PaaN2 RD05_RS06085 IPR015590 Aldehyde dehydrogenase domain RD05_RS06085 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS06085 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS06085 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS06090 IPR001753 Crotonase superfamily RD05_RS06090 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RD05_RS06090 IPR014748 Crontonase, C-terminal RD05_RS06090 IPR029045 ClpP/crotonase-like domain RD05_RS06095 IPR003736 Phenylacetic acid degradation-related domain RD05_RS06095 IPR006683 Thioesterase superfamily RD05_RS06095 IPR011973 Phenylacetic acid degradation protein PaaD RD05_RS06095 IPR029069 HotDog domain RD05_RS06100 IPR000873 AMP-dependent synthetase/ligase RD05_RS06100 IPR011880 Phenylacetate-CoA ligase RD05_RS06100 IPR028154 AMP-dependent ligase, C-terminal RD05_RS06105 IPR000259 Fimbrial-type adhesion domain RD05_RS06105 IPR008966 Adhesion domain RD05_RS06110 IPR001584 Integrase, catalytic core RD05_RS06110 IPR009057 Homeodomain-like RD05_RS06110 IPR012337 Ribonuclease H-like domain RD05_RS06110 IPR024967 DNA-binding domain, IS481-type RD05_RS06115 IPR001584 Integrase, catalytic core RD05_RS06115 IPR009057 Homeodomain-like RD05_RS06115 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06115 IPR012337 Ribonuclease H-like domain RD05_RS06115 IPR024967 DNA-binding domain, IS481-type RD05_RS06120 IPR004682 TRAP dicarboxylate transporter RD05_RS06120 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS06125 IPR004681 TRAP transporter permease protein RD05_RS06125 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS06130 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS06135 IPR010073 Phosphoribosylformylglycinamidine synthase RD05_RS06135 IPR010918 AIR synthase-related protein, C-terminal domain RD05_RS06135 IPR016188 PurM, N-terminal-like RD05_RS06135 IPR029062 Class I glutamine amidotransferase-like RD05_RS06140 IPR008638 Filamentous haemagglutinin, N-terminal RD05_RS06140 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RD05_RS06140 IPR011050 Pectin lyase fold/virulence factor RD05_RS06140 IPR012334 Pectin lyase fold RD05_RS06140 IPR025157 Haemagluttinin repeat RD05_RS06145 IPR001584 Integrase, catalytic core RD05_RS06145 IPR009057 Homeodomain-like RD05_RS06145 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06145 IPR012337 Ribonuclease H-like domain RD05_RS06145 IPR024967 DNA-binding domain, IS481-type RD05_RS06150 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein RD05_RS06155 IPR000835 MarR-type HTH domain RD05_RS06155 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06155 IPR023187 Transcriptional regulator MarR-type, conserved site RD05_RS06160 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS06160 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06160 IPR011051 RmlC-like cupin domain RD05_RS06160 IPR013096 Cupin 2, conserved barrel RD05_RS06160 IPR014710 RmlC-like jelly roll fold RD05_RS06165 IPR001303 Class II aldolase/adducin N-terminal RD05_RS06170 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS06170 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD05_RS06175 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RD05_RS06180 IPR024924 7-carboxy-7-deazaguanine synthase-like RD05_RS06180 IPR030977 RD05_RS06180 RD05_RS06185 IPR000352 Peptide chain release factor class I/class II RD05_RS06190 IPR014509 Uncharacterised conserved protein UCP020606 RD05_RS06195 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RD05_RS06195 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RD05_RS06200 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06200 IPR014757 Transcription regulator IclR, C-terminal RD05_RS06200 IPR029016 GAF domain-like RD05_RS06205 IPR002220 DapA-like RD05_RS06205 IPR013785 Aldolase-type TIM barrel RD05_RS06210 IPR005064 Bordetella uptake gene RD05_RS06215 IPR013784 Carbohydrate-binding-like fold RD05_RS06215 IPR014766 Carboxypeptidase, regulatory domain RD05_RS06220 IPR008551 Protein of unknown function DUF833 RD05_RS06225 IPR002818 ThiJ/PfpI RD05_RS06225 IPR029062 Class I glutamine amidotransferase-like RD05_RS06230 IPR006680 Amidohydrolase 1 RD05_RS06230 IPR032466 RD05_RS06230 RD05_RS06235 IPR003953 FAD binding domain RD05_RS06235 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS06235 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD05_RS06240 IPR005064 Bordetella uptake gene RD05_RS06245 IPR002347 Glucose/ribitol dehydrogenase RD05_RS06245 IPR016040 NAD(P)-binding domain RD05_RS06250 IPR005471 Transcription regulator IclR, N-terminal RD05_RS06250 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06250 IPR014757 Transcription regulator IclR, C-terminal RD05_RS06250 IPR029016 GAF domain-like RD05_RS06255 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RD05_RS06255 IPR006076 FAD dependent oxidoreductase RD05_RS06255 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS06255 IPR031656 RD05_RS06255 RD05_RS06260 IPR001034 HTH DeoR N-terminal domain RD05_RS06260 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06260 IPR014036 DeoR C-terminal sensor domain RD05_RS06260 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RD05_RS06265 IPR003439 ABC transporter-like RD05_RS06265 IPR003593 AAA+ ATPase domain RD05_RS06265 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS06265 IPR012340 Nucleic acid-binding, OB-fold RD05_RS06265 IPR013611 Transport-associated OB, type 2 RD05_RS06265 IPR017871 ABC transporter, conserved site RD05_RS06265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06270 IPR003439 ABC transporter-like RD05_RS06270 IPR003593 AAA+ ATPase domain RD05_RS06270 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS06270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06275 IPR000515 MetI-like domain RD05_RS06280 IPR000515 MetI-like domain RD05_RS06285 IPR018678 Protein of unknown function DUF2160, transmembrane RD05_RS06290 IPR014597 ABC transporter, periplasmic substrate-binding protein RD05_RS06295 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria RD05_RS06300 IPR007462 Protein of unknown function DUF502 RD05_RS06305 IPR000485 AsnC-type HTH domain RD05_RS06305 IPR011008 Dimeric alpha-beta barrel RD05_RS06305 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06305 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS06305 IPR019888 Transcription regulator AsnC-type RD05_RS06310 IPR006076 FAD dependent oxidoreductase RD05_RS06310 IPR023080 D-amino acid dehydrogenase small subunit, DadA RD05_RS06310 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS06315 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD05_RS06315 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type RD05_RS06315 IPR029052 Metallo-dependent phosphatase-like RD05_RS06320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06325 IPR005064 Bordetella uptake gene RD05_RS06330 IPR001584 Integrase, catalytic core RD05_RS06330 IPR009057 Homeodomain-like RD05_RS06330 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06330 IPR012337 Ribonuclease H-like domain RD05_RS06330 IPR024967 DNA-binding domain, IS481-type RD05_RS06340 IPR000014 PAS domain RD05_RS06340 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS06340 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06340 IPR013656 PAS fold-4 RD05_RS06340 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS06350 IPR005546 Autotransporter beta-domain RD05_RS06355 IPR018715 Protein of unknown function DUF2239 RD05_RS06360 IPR000644 CBS domain RD05_RS06360 IPR001093 IMP dehydrogenase/GMP reductase RD05_RS06360 IPR005990 Inosine-5'-monophosphate dehydrogenase RD05_RS06360 IPR013785 Aldolase-type TIM barrel RD05_RS06360 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RD05_RS06365 IPR001674 GMP synthase, C-terminal RD05_RS06365 IPR004739 GMP synthase, N-terminal RD05_RS06365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS06365 IPR017926 Glutamine amidotransferase RD05_RS06365 IPR022310 NAD/GMP synthase RD05_RS06365 IPR022955 GMP synthase RD05_RS06365 IPR029062 Class I glutamine amidotransferase-like RD05_RS06370 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS06370 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06375 IPR012893 HipA-like, C-terminal RD05_RS06375 IPR012894 HipA, N-terminal subdomain 2 RD05_RS06375 IPR017508 HipA, N-terminal subdomain 1 RD05_RS06380 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS06380 IPR009057 Homeodomain-like RD05_RS06380 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS06380 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS06385 IPR011701 Major facilitator superfamily RD05_RS06385 IPR020846 Major facilitator superfamily domain RD05_RS06395 IPR005471 Transcription regulator IclR, N-terminal RD05_RS06395 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06395 IPR014757 Transcription regulator IclR, C-terminal RD05_RS06395 IPR029016 GAF domain-like RD05_RS06400 IPR011059 Metal-dependent hydrolase, composite domain RD05_RS06400 IPR013108 Amidohydrolase 3 RD05_RS06400 IPR032466 RD05_RS06400 RD05_RS06405 IPR015168 SsuA/THI5-like RD05_RS06410 IPR003439 ABC transporter-like RD05_RS06410 IPR003593 AAA+ ATPase domain RD05_RS06410 IPR017871 ABC transporter, conserved site RD05_RS06410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06415 IPR000515 MetI-like domain RD05_RS06420 IPR007506 Domain of unknown function DUF521 RD05_RS06425 IPR002840 Domain of unknown function DUF126 RD05_RS06425 IPR008279 PEP-utilising enzyme, mobile domain RD05_RS06425 IPR012016 Uncharacterised protein family UPF0107 RD05_RS06425 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS06430 IPR029062 Class I glutamine amidotransferase-like RD05_RS06435 IPR001584 Integrase, catalytic core RD05_RS06435 IPR009057 Homeodomain-like RD05_RS06435 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06435 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06435 IPR012337 Ribonuclease H-like domain RD05_RS06435 IPR024967 DNA-binding domain, IS481-type RD05_RS06440 IPR002818 ThiJ/PfpI RD05_RS06440 IPR029062 Class I glutamine amidotransferase-like RD05_RS06445 IPR001902 Sulphate anion transporter RD05_RS06445 IPR002645 STAS domain RD05_RS06445 IPR011547 Sulphate transporter RD05_RS06450 IPR001279 Beta-lactamase-like RD05_RS06450 IPR011108 RNA-metabolising metallo-beta-lactamase RD05_RS06450 IPR022712 Beta-Casp domain RD05_RS06455 IPR001584 Integrase, catalytic core RD05_RS06455 IPR009057 Homeodomain-like RD05_RS06455 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06455 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06455 IPR012337 Ribonuclease H-like domain RD05_RS06455 IPR024967 DNA-binding domain, IS481-type RD05_RS06465 IPR001279 Beta-lactamase-like RD05_RS06470 IPR002818 ThiJ/PfpI RD05_RS06470 IPR009057 Homeodomain-like RD05_RS06470 IPR018060 DNA binding HTH domain, AraC-type RD05_RS06470 IPR018062 HTH domain AraC-type, conserved site RD05_RS06470 IPR029062 Class I glutamine amidotransferase-like RD05_RS06475 IPR000847 Transcription regulator HTH, LysR RD05_RS06475 IPR005119 LysR, substrate-binding RD05_RS06475 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06480 IPR011051 RmlC-like cupin domain RD05_RS06480 IPR014710 RmlC-like jelly roll fold RD05_RS06480 IPR025979 ChrR-like cupin domain RD05_RS06485 IPR001613 Flavin amine oxidase RD05_RS06485 IPR002937 Amine oxidase RD05_RS06485 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS06490 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS06490 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD05_RS06490 IPR011032 GroES (chaperonin 10)-like RD05_RS06490 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS06490 IPR013154 Alcohol dehydrogenase GroES-like RD05_RS06490 IPR016040 NAD(P)-binding domain RD05_RS06490 IPR020843 Polyketide synthase, enoylreductase RD05_RS06495 IPR011701 Major facilitator superfamily RD05_RS06495 IPR020846 Major facilitator superfamily domain RD05_RS06500 IPR000524 Transcription regulator HTH, GntR RD05_RS06500 IPR004839 Aminotransferase, class I/classII RD05_RS06500 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06500 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS06500 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS06500 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS06505 IPR007396 Transcriptional regulator PAI 2-type RD05_RS06505 IPR012349 FMN-binding split barrel RD05_RS06510 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD05_RS06515 IPR014922 Domain of unknown function DUF1801 RD05_RS06520 IPR002933 Peptidase M20 RD05_RS06520 IPR011650 Peptidase M20, dimerisation domain RD05_RS06525 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS06525 IPR030678 RD05_RS06525 RD05_RS06530 IPR000515 MetI-like domain RD05_RS06535 IPR000515 MetI-like domain RD05_RS06540 IPR003439 ABC transporter-like RD05_RS06540 IPR003593 AAA+ ATPase domain RD05_RS06540 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS06540 IPR017871 ABC transporter, conserved site RD05_RS06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06545 IPR000843 Transcription regulator HTH, LacI RD05_RS06545 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06545 IPR028082 Periplasmic binding protein-like I RD05_RS06555 IPR009061 DNA binding domain, putative RD05_RS06555 IPR015358 Transcription regulator MerR, DNA binding RD05_RS06560 IPR001584 Integrase, catalytic core RD05_RS06560 IPR009057 Homeodomain-like RD05_RS06560 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06560 IPR012337 Ribonuclease H-like domain RD05_RS06560 IPR024967 DNA-binding domain, IS481-type RD05_RS06565 IPR007404 Protein of unknown function DUF457 RD05_RS06570 IPR032816 RD05_RS06570 RD05_RS06570 IPR032818 RD05_RS06570 RD05_RS06575 IPR000182 GNAT domain RD05_RS06575 IPR016181 Acyl-CoA N-acyltransferase RD05_RS06575 IPR032962 RD05_RS06575 RD05_RS06580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS06585 IPR001584 Integrase, catalytic core RD05_RS06585 IPR009057 Homeodomain-like RD05_RS06585 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06585 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06585 IPR012337 Ribonuclease H-like domain RD05_RS06585 IPR024967 DNA-binding domain, IS481-type RD05_RS06595 IPR000524 Transcription regulator HTH, GntR RD05_RS06595 IPR004839 Aminotransferase, class I/classII RD05_RS06595 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06595 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS06595 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS06595 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS06600 IPR001584 Integrase, catalytic core RD05_RS06600 IPR009057 Homeodomain-like RD05_RS06600 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06600 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06600 IPR012337 Ribonuclease H-like domain RD05_RS06600 IPR024967 DNA-binding domain, IS481-type RD05_RS06605 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RD05_RS06605 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RD05_RS06605 IPR029054 dUTPase-like RD05_RS06610 IPR001584 Integrase, catalytic core RD05_RS06610 IPR009057 Homeodomain-like RD05_RS06610 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06610 IPR012337 Ribonuclease H-like domain RD05_RS06610 IPR024967 DNA-binding domain, IS481-type RD05_RS06615 IPR001706 Ribosomal protein L35, non-mitochondrial RD05_RS06615 IPR018265 Ribosomal protein L35, conserved site RD05_RS06615 IPR021137 Ribosomal protein L35 RD05_RS06620 IPR005813 Ribosomal protein L20 RD05_RS06625 IPR002319 Phenylalanyl-tRNA synthetase RD05_RS06625 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RD05_RS06625 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RD05_RS06625 IPR010978 tRNA-binding arm RD05_RS06625 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RD05_RS06630 IPR002547 tRNA-binding domain RD05_RS06630 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RD05_RS06630 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding RD05_RS06630 IPR005146 B3/B4 tRNA-binding domain RD05_RS06630 IPR005147 tRNA synthetase, B5-domain RD05_RS06630 IPR009061 DNA binding domain, putative RD05_RS06630 IPR012340 Nucleic acid-binding, OB-fold RD05_RS06630 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RD05_RS06635 IPR000119 Histone-like bacterial DNA-binding protein RD05_RS06635 IPR005684 Integration host factor, alpha subunit RD05_RS06635 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD05_RS06635 IPR020816 Histone-like DNA-binding protein, conserved site RD05_RS06640 IPR000551 MerR-type HTH domain RD05_RS06640 IPR009061 DNA binding domain, putative RD05_RS06655 IPR007461 Ysc84 actin-binding domain RD05_RS06665 IPR001584 Integrase, catalytic core RD05_RS06665 IPR009057 Homeodomain-like RD05_RS06665 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06665 IPR012337 Ribonuclease H-like domain RD05_RS06665 IPR024967 DNA-binding domain, IS481-type RD05_RS06685 IPR007346 Endonuclease I RD05_RS06690 IPR012556 Entericidin EcnAB RD05_RS06705 IPR002082 Aspartate carbamoyltransferase RD05_RS06705 IPR006130 Aspartate/ornithine carbamoyltransferase RD05_RS06705 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD05_RS06705 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD05_RS06710 IPR007476 Putative exonuclease, RdgC RD05_RS06720 IPR003673 CoA-transferase family III RD05_RS06720 IPR023606 CoA-transferase family III domain RD05_RS06725 IPR000847 Transcription regulator HTH, LysR RD05_RS06725 IPR005119 LysR, substrate-binding RD05_RS06725 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06730 IPR016039 Thiolase-like RD05_RS06735 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD05_RS06735 IPR012340 Nucleic acid-binding, OB-fold RD05_RS06735 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD05_RS06740 IPR002539 MaoC-like domain RD05_RS06740 IPR029069 HotDog domain RD05_RS06745 IPR002347 Glucose/ribitol dehydrogenase RD05_RS06745 IPR016040 NAD(P)-binding domain RD05_RS06745 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS06755 IPR000515 MetI-like domain RD05_RS06760 IPR003439 ABC transporter-like RD05_RS06760 IPR003593 AAA+ ATPase domain RD05_RS06760 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS06760 IPR012340 Nucleic acid-binding, OB-fold RD05_RS06760 IPR013611 Transport-associated OB, type 2 RD05_RS06760 IPR017871 ABC transporter, conserved site RD05_RS06760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06765 IPR001753 Crotonase superfamily RD05_RS06765 IPR014748 Crontonase, C-terminal RD05_RS06765 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS06765 IPR029045 ClpP/crotonase-like domain RD05_RS06770 IPR005828 General substrate transporter RD05_RS06770 IPR005829 Sugar transporter, conserved site RD05_RS06770 IPR020846 Major facilitator superfamily domain RD05_RS06775 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS06775 IPR003660 HAMP linker domain RD05_RS06775 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS06775 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS06775 IPR013727 Two-component sensor kinase N-terminal RD05_RS06780 IPR001789 Signal transduction response regulator, receiver domain RD05_RS06780 IPR001867 Signal transduction response regulator, C-terminal RD05_RS06780 IPR011006 CheY-like superfamily RD05_RS06780 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06780 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS06785 IPR003593 AAA+ ATPase domain RD05_RS06785 IPR013765 DNA recombination and repair protein RecA RD05_RS06785 IPR020584 DNA recombination/repair protein RecA, conserved site RD05_RS06785 IPR023400 DNA recombination and repair protein RecA, C-terminal RD05_RS06785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06790 IPR003783 Regulatory protein RecX RD05_RS06790 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06795 IPR000847 Transcription regulator HTH, LysR RD05_RS06795 IPR005119 LysR, substrate-binding RD05_RS06795 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06800 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RD05_RS06800 IPR006276 Cobalamin-independent methionine synthase RD05_RS06800 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal RD05_RS06805 IPR021312 Protein of unknown function DUF2889 RD05_RS06810 IPR005809 Succinyl-CoA synthetase, beta subunit RD05_RS06810 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RD05_RS06810 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RD05_RS06810 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS06810 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS06810 IPR016102 Succinyl-CoA synthetase-like RD05_RS06810 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RD05_RS06815 IPR003781 CoA-binding RD05_RS06815 IPR005810 Succinyl-CoA ligase, alpha subunit RD05_RS06815 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RD05_RS06815 IPR016040 NAD(P)-binding domain RD05_RS06815 IPR016102 Succinyl-CoA synthetase-like RD05_RS06815 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RD05_RS06820 IPR005496 Integral membrane protein TerC RD05_RS06820 IPR022301 Integral membrane protein YjbE RD05_RS06825 IPR005496 Integral membrane protein TerC RD05_RS06825 IPR022301 Integral membrane protein YjbE RD05_RS06830 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase RD05_RS06830 IPR022417 Porphobilinogen deaminase, N-terminal RD05_RS06830 IPR022418 Porphobilinogen deaminase, C-terminal RD05_RS06830 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RD05_RS06835 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase RD05_RS06840 IPR007470 HemX RD05_RS06845 IPR005254 Heme biosynthesis-associated TPR protein RD05_RS06845 IPR010817 HemY, N-terminal RD05_RS06845 IPR011990 Tetratricopeptide-like helical domain RD05_RS06850 IPR008162 Inorganic pyrophosphatase RD05_RS06855 IPR011234 Fumarylacetoacetase, C-terminal-related RD05_RS06860 IPR012556 Entericidin EcnAB RD05_RS06885 IPR013974 SAF domain RD05_RS06885 IPR017592 Pilus assembly, Flp-type CpaB RD05_RS06885 IPR031571 RD05_RS06885 RD05_RS06890 IPR001775 GspD/PilQ family RD05_RS06890 IPR004845 Type II secretion system GspD, conserved site RD05_RS06890 IPR004846 Type II/III secretion system RD05_RS06890 IPR032789 RD05_RS06890 RD05_RS06895 IPR000253 Forkhead-associated (FHA) domain RD05_RS06895 IPR001482 Type II secretion system protein E RD05_RS06895 IPR003593 AAA+ ATPase domain RD05_RS06895 IPR008984 SMAD/FHA domain RD05_RS06895 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS06900 IPR018076 Type II secretion system F domain RD05_RS06910 IPR001584 Integrase, catalytic core RD05_RS06910 IPR009057 Homeodomain-like RD05_RS06910 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS06910 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06910 IPR012337 Ribonuclease H-like domain RD05_RS06910 IPR024967 DNA-binding domain, IS481-type RD05_RS06915 IPR005064 Bordetella uptake gene RD05_RS06920 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RD05_RS06920 IPR016040 NAD(P)-binding domain RD05_RS06920 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD05_RS06920 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD05_RS06920 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RD05_RS06925 IPR003767 Malate/L-lactate dehydrogenase RD05_RS06930 IPR000847 Transcription regulator HTH, LysR RD05_RS06930 IPR005119 LysR, substrate-binding RD05_RS06930 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS06935 IPR008257 Renal dipeptidase family RD05_RS06935 IPR032466 RD05_RS06935 RD05_RS06940 IPR006076 FAD dependent oxidoreductase RD05_RS06940 IPR006278 Sarcosine oxidase, beta subunit, heterotetrameric RD05_RS06940 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS06945 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric RD05_RS06950 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD05_RS06950 IPR006222 Glycine cleavage T-protein, N-terminal RD05_RS06950 IPR006277 Sarcosine oxidase, alpha subunit RD05_RS06950 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RD05_RS06950 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS06950 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD05_RS06950 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RD05_RS06955 IPR007375 Sarcosine oxidase, gamma subunit RD05_RS06960 IPR002376 Formyl transferase, N-terminal RD05_RS06960 IPR004810 Formyltetrahydrofolate deformylase RD05_RS06965 IPR005064 Bordetella uptake gene RD05_RS06970 IPR005656 MmgE/PrpD RD05_RS06975 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS06975 IPR029058 Alpha/Beta hydrolase fold RD05_RS06985 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RD05_RS06985 IPR006094 FAD linked oxidase, N-terminal RD05_RS06985 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RD05_RS06985 IPR016166 FAD-binding, type 2 RD05_RS06985 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS06985 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS06990 IPR000846 Dihydrodipicolinate reductase, N-terminal RD05_RS06990 IPR016040 NAD(P)-binding domain RD05_RS06990 IPR022663 Dihydrodipicolinate reductase, C-terminal RD05_RS06990 IPR022664 Dihydrodipicolinate reductase, conserved site RD05_RS06990 IPR023940 Dihydrodipicolinate reductase, bacterial RD05_RS06995 IPR007450 Lipoprotein SmpA/OmlA RD05_RS06995 IPR026592 Outer membrane protein assembly factor BamE RD05_RS07000 IPR002481 Ferric-uptake regulator RD05_RS07000 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07005 IPR003395 RecF/RecN/SMC, N-terminal RD05_RS07005 IPR004604 DNA recombination/repair protein RecN RD05_RS07005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07010 IPR002504 Inorganic polyphosphate/ATP-NAD kinase RD05_RS07010 IPR016064 ATP-NAD kinase-like domain RD05_RS07010 IPR017437 ATP-NAD kinase, PpnK-type, all-beta RD05_RS07010 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 RD05_RS07015 IPR002571 Heat-inducible transcription repressor HrcA RD05_RS07015 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain RD05_RS07015 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07015 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal RD05_RS07015 IPR029016 GAF domain-like RD05_RS07020 IPR001015 Ferrochelatase RD05_RS07020 IPR019772 Ferrochelatase, active site RD05_RS07030 IPR000740 GrpE nucleotide exchange factor RD05_RS07030 IPR009012 GrpE nucleotide exchange factor, head RD05_RS07030 IPR013805 GrpE nucleotide exchange factor, coiled-coil RD05_RS07035 IPR012336 Thioredoxin-like fold RD05_RS07040 IPR012725 Chaperone DnaK RD05_RS07040 IPR013126 Heat shock protein 70 family RD05_RS07040 IPR018181 Heat shock protein 70, conserved site RD05_RS07040 IPR029047 Heat shock protein 70kD, peptide-binding domain RD05_RS07040 IPR029048 Heat shock protein 70kD, C-terminal domain RD05_RS07045 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RD05_RS07045 IPR001623 DnaJ domain RD05_RS07045 IPR002939 Chaperone DnaJ, C-terminal RD05_RS07045 IPR008971 HSP40/DnaJ peptide-binding RD05_RS07045 IPR012724 Chaperone DnaJ RD05_RS07045 IPR018253 DnaJ domain, conserved site RD05_RS07050 IPR001431 Peptidase M16, zinc-binding site RD05_RS07050 IPR007863 Peptidase M16, C-terminal domain RD05_RS07050 IPR011237 Peptidase M16 domain RD05_RS07050 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RD05_RS07050 IPR011765 Peptidase M16, N-terminal RD05_RS07060 IPR016181 Acyl-CoA N-acyltransferase RD05_RS07065 IPR008912 Uncharacterised protein family CoxE-like RD05_RS07070 IPR003593 AAA+ ATPase domain RD05_RS07070 IPR003959 ATPase, AAA-type, core RD05_RS07070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07075 IPR001584 Integrase, catalytic core RD05_RS07075 IPR009057 Homeodomain-like RD05_RS07075 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07075 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07075 IPR012337 Ribonuclease H-like domain RD05_RS07075 IPR024967 DNA-binding domain, IS481-type RD05_RS07080 IPR009056 Cytochrome c-like domain RD05_RS07085 IPR008168 Cytochrome c, class IC RD05_RS07085 IPR009056 Cytochrome c-like domain RD05_RS07090 IPR014993 Protein of unknown function DUF1841 RD05_RS07095 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD05_RS07095 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic RD05_RS07095 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD05_RS07095 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS07100 IPR002201 Glycosyl transferase, family 9 RD05_RS07105 IPR007016 O-antigen ligase-related RD05_RS07110 IPR001584 Integrase, catalytic core RD05_RS07110 IPR009057 Homeodomain-like RD05_RS07110 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07110 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07110 IPR012337 Ribonuclease H-like domain RD05_RS07110 IPR024967 DNA-binding domain, IS481-type RD05_RS07115 IPR001789 Signal transduction response regulator, receiver domain RD05_RS07115 IPR001867 Signal transduction response regulator, C-terminal RD05_RS07115 IPR011006 CheY-like superfamily RD05_RS07115 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07120 IPR003018 GAF domain RD05_RS07120 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS07120 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS07120 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal RD05_RS07120 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS07120 IPR025201 Sensor protein KdpD, transmembrane domain RD05_RS07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07120 IPR029016 GAF domain-like RD05_RS07125 IPR003820 Potassium-transporting ATPase C chain RD05_RS07130 IPR001757 Cation-transporting P-type ATPase RD05_RS07130 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA RD05_RS07130 IPR008250 P-type ATPase, A domain RD05_RS07130 IPR018303 P-type ATPase, phosphorylation site RD05_RS07130 IPR023214 HAD-like domain RD05_RS07130 IPR023299 P-type ATPase, cytoplasmic domain N RD05_RS07135 IPR004623 Potassium-transporting ATPase A chain RD05_RS07140 IPR019886 Sodium symporter small subunit, predicted RD05_RS07145 IPR001734 Sodium/solute symporter RD05_RS07145 IPR018247 EF-Hand 1, calcium-binding site RD05_RS07145 IPR019899 Sodium/solute symporter, VC2705 subfamily RD05_RS07150 IPR001584 Integrase, catalytic core RD05_RS07150 IPR009057 Homeodomain-like RD05_RS07150 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07150 IPR012337 Ribonuclease H-like domain RD05_RS07150 IPR024967 DNA-binding domain, IS481-type RD05_RS07155 IPR001584 Integrase, catalytic core RD05_RS07155 IPR009057 Homeodomain-like RD05_RS07155 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07155 IPR012337 Ribonuclease H-like domain RD05_RS07155 IPR024967 DNA-binding domain, IS481-type RD05_RS07160 IPR000390 Small multidrug resistance protein family RD05_RS07165 IPR002625 Smr protein/MutS2 C-terminal RD05_RS07170 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD05_RS07170 IPR005982 Thioredoxin reductase RD05_RS07170 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD05_RS07170 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS07175 IPR002543 FtsK domain RD05_RS07175 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07175 IPR018541 FtsK gamma domain RD05_RS07175 IPR025199 Domain of unknown function DUF4117 RD05_RS07175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07180 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RD05_RS07180 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria RD05_RS07180 IPR029046 Lipoprotein localisation LolA/LolB/LppX RD05_RS07185 IPR003593 AAA+ ATPase domain RD05_RS07185 IPR003959 ATPase, AAA-type, core RD05_RS07185 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD05_RS07185 IPR021886 MgsA AAA+ ATPase C-terminal RD05_RS07185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07185 IPR032423 RD05_RS07185 RD05_RS07190 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD05_RS07190 IPR002317 Serine-tRNA ligase, type1 RD05_RS07190 IPR010978 tRNA-binding arm RD05_RS07190 IPR015866 Serine-tRNA synthetase, type1, N-terminal RD05_RS07215 IPR000160 GGDEF domain RD05_RS07215 IPR029787 Nucleotide cyclase RD05_RS07225 IPR002771 Multiple antibiotic resistance (MarC)-related RD05_RS07230 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS07230 IPR010105 TonB-dependent siderophore receptor RD05_RS07230 IPR012910 TonB-dependent receptor, plug RD05_RS07235 IPR011701 Major facilitator superfamily RD05_RS07235 IPR020846 Major facilitator superfamily domain RD05_RS07240 IPR009057 Homeodomain-like RD05_RS07240 IPR018060 DNA binding HTH domain, AraC-type RD05_RS07245 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD05_RS07245 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS07250 IPR023998 Siderophore ferric iron reductase, AHA1954 family RD05_RS07250 IPR024726 Ferric iron reductase, C-terminal RD05_RS07255 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RD05_RS07255 IPR022770 Ferric iron reductase FhuF domain RD05_RS07260 IPR016181 Acyl-CoA N-acyltransferase RD05_RS07260 IPR019432 Siderophore biosynthesis protein, conserved domain RD05_RS07265 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS07265 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RD05_RS07275 IPR006153 Cation/H+ exchanger RD05_RS07280 IPR002347 Glucose/ribitol dehydrogenase RD05_RS07280 IPR011294 3-hydroxybutyrate dehydrogenase RD05_RS07280 IPR016040 NAD(P)-binding domain RD05_RS07280 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS07285 IPR001584 Integrase, catalytic core RD05_RS07285 IPR009057 Homeodomain-like RD05_RS07285 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07285 IPR012337 Ribonuclease H-like domain RD05_RS07285 IPR024967 DNA-binding domain, IS481-type RD05_RS07290 IPR005583 Uncharacterised protein family UPF0246 RD05_RS07295 IPR011701 Major facilitator superfamily RD05_RS07295 IPR020846 Major facilitator superfamily domain RD05_RS07300 IPR032692 RD05_RS07300 RD05_RS07305 IPR001584 Integrase, catalytic core RD05_RS07305 IPR009057 Homeodomain-like RD05_RS07305 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07305 IPR012337 Ribonuclease H-like domain RD05_RS07305 IPR024967 DNA-binding domain, IS481-type RD05_RS07310 IPR000160 GGDEF domain RD05_RS07310 IPR003018 GAF domain RD05_RS07310 IPR029016 GAF domain-like RD05_RS07310 IPR029787 Nucleotide cyclase RD05_RS07315 IPR001584 Integrase, catalytic core RD05_RS07315 IPR009057 Homeodomain-like RD05_RS07315 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07315 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07315 IPR012337 Ribonuclease H-like domain RD05_RS07315 IPR024967 DNA-binding domain, IS481-type RD05_RS07320 IPR010723 HemN, C-terminal domain RD05_RS07330 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS07330 IPR001789 Signal transduction response regulator, receiver domain RD05_RS07330 IPR011006 CheY-like superfamily RD05_RS07330 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07330 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS07335 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD05_RS07335 IPR002320 Threonine-tRNA ligase, class IIa RD05_RS07335 IPR004095 TGS RD05_RS07335 IPR004154 Anticodon-binding RD05_RS07335 IPR012675 Beta-grasp domain RD05_RS07335 IPR012676 TGS-like RD05_RS07335 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RD05_RS07335 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RD05_RS07340 IPR001288 Translation initiation factor 3 RD05_RS07340 IPR019813 Translation initiation factor 3, conserved site RD05_RS07340 IPR019814 Translation initiation factor 3, N-terminal RD05_RS07340 IPR019815 Translation initiation factor 3, C-terminal RD05_RS07345 IPR004215 Prokaryotic glutathione synthetase, N-terminal RD05_RS07345 IPR004218 Prokaryotic glutathione synthetase, ATP-binding RD05_RS07345 IPR006284 Glutathione synthetase, prokaryotic RD05_RS07345 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS07345 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS07345 IPR016185 Pre-ATP-grasp domain RD05_RS07350 IPR004701 Phosphotransferase system, mannose-type IIA component RD05_RS07355 IPR000032 Phosphocarrier HPr protein-like RD05_RS07355 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RD05_RS07355 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RD05_RS07360 IPR000121 PEP-utilising enzyme, C-terminal RD05_RS07360 IPR006318 Phosphoenolpyruvate-utilising enzyme RD05_RS07360 IPR008279 PEP-utilising enzyme, mobile domain RD05_RS07360 IPR008731 Phosphotransferase system, enzyme I N-terminal RD05_RS07360 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS07360 IPR018274 PEP-utilising enzyme, active site RD05_RS07360 IPR023151 PEP-utilising enzyme, conserved site RD05_RS07360 IPR024692 Phosphotransferase system, enzyme I RD05_RS07370 IPR003462 Ornithine cyclodeaminase/mu-crystallin RD05_RS07370 IPR016040 NAD(P)-binding domain RD05_RS07370 IPR023401 Ornithine cyclodeaminase, N-terminal RD05_RS07375 IPR028081 Leucine-binding protein domain RD05_RS07375 IPR028082 Periplasmic binding protein-like I RD05_RS07380 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS07380 IPR014337 Ectoine/hydroxyEctoine ABC transporter solute-binding protein EhuB RD05_RS07385 IPR000515 MetI-like domain RD05_RS07385 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS07385 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC RD05_RS07390 IPR000515 MetI-like domain RD05_RS07390 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS07390 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD RD05_RS07395 IPR003439 ABC transporter-like RD05_RS07395 IPR003593 AAA+ ATPase domain RD05_RS07395 IPR017871 ABC transporter, conserved site RD05_RS07395 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07395 IPR030679 RD05_RS07395 RD05_RS07400 IPR001584 Integrase, catalytic core RD05_RS07400 IPR009057 Homeodomain-like RD05_RS07400 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07400 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07400 IPR012337 Ribonuclease H-like domain RD05_RS07400 IPR024967 DNA-binding domain, IS481-type RD05_RS07405 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD05_RS07405 IPR011057 Mss4-like RD05_RS07410 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD05_RS07410 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS07410 IPR016040 NAD(P)-binding domain RD05_RS07410 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD05_RS07415 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RD05_RS07420 IPR003211 AmiS/UreI transporter RD05_RS07425 IPR004304 Acetamidase/Formamidase RD05_RS07430 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS07430 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07430 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS07430 IPR029016 GAF domain-like RD05_RS07435 IPR011037 Pyruvate kinase-like, insert domain RD05_RS07435 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RD05_RS07440 IPR000771 Ketose-bisphosphate aldolase, class-II RD05_RS07440 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype RD05_RS07440 IPR013785 Aldolase-type TIM barrel RD05_RS07445 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD05_RS07445 IPR011057 Mss4-like RD05_RS07450 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RD05_RS07450 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS07450 IPR018236 SAICAR synthetase, conserved site RD05_RS07450 IPR028923 SAICAR synthetase/ADE2, N-terminal RD05_RS07455 IPR031451 RD05_RS07455 RD05_RS07460 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS07460 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07460 IPR022452 Zinc finger/helix-turn-helix protein, YgiT RD05_RS07460 IPR022453 Zinc finger, YgiT-type RD05_RS07460 IPR032758 RD05_RS07460 RD05_RS07465 IPR003752 Disulphide bond formation protein DsbB/BdbC RD05_RS07465 IPR023380 Disulphide bond formation protein DsbB-like domain RD05_RS07470 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain RD05_RS07470 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE RD05_RS07475 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD05_RS07475 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RD05_RS07475 IPR011054 Rudiment single hybrid motif RD05_RS07475 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS07475 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS07475 IPR016185 Pre-ATP-grasp domain RD05_RS07480 IPR005145 Putative GTP-binding controlling metal-binding domain RD05_RS07480 IPR006070 YrdC-like domain RD05_RS07480 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RD05_RS07480 IPR017945 DHBP synthase RibB-like alpha/beta domain RD05_RS07485 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS07490 IPR005471 Transcription regulator IclR, N-terminal RD05_RS07490 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07490 IPR014757 Transcription regulator IclR, C-terminal RD05_RS07490 IPR029016 GAF domain-like RD05_RS07495 IPR006035 Ureohydrolase RD05_RS07495 IPR023696 Ureohydrolase domain RD05_RS07500 IPR001320 Ionotropic glutamate receptor RD05_RS07500 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS07505 IPR000515 MetI-like domain RD05_RS07505 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS07510 IPR003439 ABC transporter-like RD05_RS07510 IPR003593 AAA+ ATPase domain RD05_RS07510 IPR017871 ABC transporter, conserved site RD05_RS07510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07510 IPR030679 RD05_RS07510 RD05_RS07515 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS07515 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS07515 IPR029061 Thiamin diphosphate-binding fold RD05_RS07520 IPR002539 MaoC-like domain RD05_RS07520 IPR029069 HotDog domain RD05_RS07525 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS07525 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS07525 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS07525 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS07525 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS07530 IPR000399 TPP-binding enzyme, conserved site RD05_RS07530 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS07530 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS07530 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS07530 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS07530 IPR029061 Thiamin diphosphate-binding fold RD05_RS07535 IPR000847 Transcription regulator HTH, LysR RD05_RS07535 IPR005119 LysR, substrate-binding RD05_RS07535 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07540 IPR002104 Integrase, catalytic RD05_RS07540 IPR004107 Integrase, SAM-like, N-terminal RD05_RS07540 IPR010998 Integrase, Lambda-type, N-terminal RD05_RS07540 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD05_RS07540 IPR011932 Tyrosine recombinase XerD RD05_RS07540 IPR013762 Integrase-like, catalytic core RD05_RS07540 IPR023009 Tyrosine recombinase XerC/XerD RD05_RS07540 IPR023109 Integrase/recombinase, N-terminal RD05_RS07545 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RD05_RS07545 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RD05_RS07550 IPR002818 ThiJ/PfpI RD05_RS07550 IPR006286 Peptidase C56, PfpI RD05_RS07550 IPR029062 Class I glutamine amidotransferase-like RD05_RS07555 IPR027373 Ribbon-helix-helix domain RD05_RS07560 IPR001584 Integrase, catalytic core RD05_RS07560 IPR009057 Homeodomain-like RD05_RS07560 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07560 IPR012337 Ribonuclease H-like domain RD05_RS07560 IPR024967 DNA-binding domain, IS481-type RD05_RS07565 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RD05_RS07565 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS07565 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RD05_RS07575 IPR011701 Major facilitator superfamily RD05_RS07575 IPR020846 Major facilitator superfamily domain RD05_RS07580 IPR019925 DNA repair protein, predicted RD05_RS07580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07585 IPR000212 DNA helicase, UvrD/REP type RD05_RS07585 IPR011335 Restriction endonuclease type II-like RD05_RS07585 IPR014016 UvrD-like Helicase, ATP-binding domain RD05_RS07585 IPR014017 DNA helicase, UvrD-like, C-terminal RD05_RS07585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07595 IPR003593 AAA+ ATPase domain RD05_RS07595 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD05_RS07595 IPR012763 DNA polymerase III, subunit gamma/ tau RD05_RS07595 IPR022754 DNA polymerase III, gamma subunit, domain III RD05_RS07595 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07600 IPR004401 Nucleoid-associated protein YbaB RD05_RS07605 IPR000093 DNA recombination protein RecR RD05_RS07605 IPR006171 Toprim domain RD05_RS07605 IPR023627 Recombination protein RecR RD05_RS07605 IPR023628 Recombination protein RecR, C4-type zinc finger RD05_RS07610 IPR001584 Integrase, catalytic core RD05_RS07610 IPR009057 Homeodomain-like RD05_RS07610 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07610 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07610 IPR012337 Ribonuclease H-like domain RD05_RS07610 IPR024967 DNA-binding domain, IS481-type RD05_RS07625 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RD05_RS07630 IPR006070 YrdC-like domain RD05_RS07630 IPR017945 DHBP synthase RibB-like alpha/beta domain RD05_RS07635 IPR001584 Integrase, catalytic core RD05_RS07635 IPR009057 Homeodomain-like RD05_RS07635 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07635 IPR012337 Ribonuclease H-like domain RD05_RS07635 IPR024967 DNA-binding domain, IS481-type RD05_RS07640 IPR008311 Uncharacterised conserved protein UCP028101 RD05_RS07640 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RD05_RS07640 IPR015943 WD40/YVTN repeat-like-containing domain RD05_RS07650 IPR009056 Cytochrome c-like domain RD05_RS07650 IPR010538 Protein of unknown function DUF1111 RD05_RS07660 IPR011008 Dimeric alpha-beta barrel RD05_RS07665 IPR005025 NADPH-dependent FMN reductase-like RD05_RS07665 IPR029039 Flavoprotein-like RD05_RS07670 IPR009923 Dodecin RD05_RS07670 IPR025543 Dodecin-like RD05_RS07675 IPR000432 DNA mismatch repair protein MutS, C-terminal RD05_RS07675 IPR005748 DNA mismatch repair protein MutS, type 1 RD05_RS07675 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RD05_RS07675 IPR007696 DNA mismatch repair protein MutS, core RD05_RS07675 IPR007860 DNA mismatch repair protein MutS, connector domain RD05_RS07675 IPR007861 DNA mismatch repair protein MutS, clamp RD05_RS07675 IPR016151 DNA mismatch repair protein MutS, N-terminal RD05_RS07675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07680 IPR003347 JmjC domain RD05_RS07685 IPR000259 Fimbrial-type adhesion domain RD05_RS07685 IPR008966 Adhesion domain RD05_RS07690 IPR010653 Lipoprotein, NlpB RD05_RS07695 IPR002220 DapA-like RD05_RS07695 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RD05_RS07695 IPR013785 Aldolase-type TIM barrel RD05_RS07695 IPR020624 Dihydrodipicolinate synthetase, conserved site RD05_RS07695 IPR020625 Dihydrodipicolinate synthetase, active site RD05_RS07705 IPR001584 Integrase, catalytic core RD05_RS07705 IPR009057 Homeodomain-like RD05_RS07705 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07705 IPR012337 Ribonuclease H-like domain RD05_RS07705 IPR024967 DNA-binding domain, IS481-type RD05_RS07710 IPR001320 Ionotropic glutamate receptor RD05_RS07710 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS07710 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD05_RS07715 IPR000515 MetI-like domain RD05_RS07715 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS07720 IPR003439 ABC transporter-like RD05_RS07720 IPR003593 AAA+ ATPase domain RD05_RS07720 IPR017871 ABC transporter, conserved site RD05_RS07720 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07720 IPR030679 RD05_RS07720 RD05_RS07725 IPR002912 ACT domain RD05_RS07725 IPR003607 HD/PDEase domain RD05_RS07725 IPR004095 TGS RD05_RS07725 IPR004811 RelA/SpoT family RD05_RS07725 IPR007685 RelA/SpoT RD05_RS07725 IPR012675 Beta-grasp domain RD05_RS07725 IPR012676 TGS-like RD05_RS07730 IPR003716 DNA-directed RNA polymerase, omega subunit RD05_RS07730 IPR006110 RNA polymerase, subunit omega/K/RPB6 RD05_RS07730 IPR012293 RNA polymerase subunit, RPB6/omega RD05_RS07735 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RD05_RS07735 IPR017665 Guanylate kinase RD05_RS07735 IPR020590 Guanylate kinase, conserved site RD05_RS07735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07740 IPR009056 Cytochrome c-like domain RD05_RS07745 IPR008168 Cytochrome c, class IC RD05_RS07745 IPR009056 Cytochrome c-like domain RD05_RS07745 IPR024167 Cytochrome c4 RD05_RS07750 IPR002347 Glucose/ribitol dehydrogenase RD05_RS07750 IPR016040 NAD(P)-binding domain RD05_RS07750 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS07755 IPR000064 Endopeptidase, NLPC/P60 domain RD05_RS07760 IPR000845 Nucleoside phosphorylase domain RD05_RS07760 IPR011271 AMP nucleosidase RD05_RS07760 IPR018017 Nucleoside phosphorylase RD05_RS07760 IPR018953 AMP nucleoside phosphorylase, N-terminal RD05_RS07765 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS07765 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07780 IPR005229 Conserved hypothetical protein CHP00255 RD05_RS07780 IPR013527 YicC-like, N-terminal RD05_RS07780 IPR013551 Domain of unknown function DUF1732 RD05_RS07785 IPR001247 Exoribonuclease, phosphorolytic domain 1 RD05_RS07785 IPR002381 Ribonuclease phosphorolytic, bacterial-type RD05_RS07785 IPR015847 Exoribonuclease, phosphorolytic domain 2 RD05_RS07785 IPR018336 Ribonuclease PH, conserved site RD05_RS07785 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS07785 IPR027408 PNPase/RNase PH domain RD05_RS07790 IPR005656 MmgE/PrpD RD05_RS07795 IPR000847 Transcription regulator HTH, LysR RD05_RS07795 IPR005119 LysR, substrate-binding RD05_RS07795 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07800 IPR000160 GGDEF domain RD05_RS07800 IPR001633 EAL domain RD05_RS07800 IPR029787 Nucleotide cyclase RD05_RS07805 IPR002637 Ham1-like protein RD05_RS07805 IPR020922 Non-canonical purine NTP pyrophosphatase RD05_RS07805 IPR029001 Inosine triphosphate pyrophosphatase-like RD05_RS07810 IPR001584 Integrase, catalytic core RD05_RS07810 IPR009057 Homeodomain-like RD05_RS07810 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07810 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07810 IPR012337 Ribonuclease H-like domain RD05_RS07810 IPR024967 DNA-binding domain, IS481-type RD05_RS07815 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related RD05_RS07815 IPR006638 Elongator protein 3/MiaB/NifB RD05_RS07815 IPR007197 Radical SAM RD05_RS07815 IPR010723 HemN, C-terminal domain RD05_RS07815 IPR023404 Radical SAM, alpha/beta horseshoe RD05_RS07820 IPR001637 Glutamine synthetase class-I, adenylation site RD05_RS07820 IPR004809 Glutamine synthetase type I RD05_RS07820 IPR008146 Glutamine synthetase, catalytic domain RD05_RS07820 IPR008147 Glutamine synthetase, beta-Grasp RD05_RS07820 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RD05_RS07820 IPR027302 Glutamine synthetase, N-terminal conserved site RD05_RS07820 IPR027303 Glutamine synthetase, glycine-rich site RD05_RS07825 IPR000014 PAS domain RD05_RS07825 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS07825 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS07825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS07825 IPR013656 PAS fold-4 RD05_RS07830 IPR001789 Signal transduction response regulator, receiver domain RD05_RS07830 IPR002078 RNA polymerase sigma factor 54 interaction domain RD05_RS07830 IPR002197 DNA binding HTH domain, Fis-type RD05_RS07830 IPR003593 AAA+ ATPase domain RD05_RS07830 IPR009057 Homeodomain-like RD05_RS07830 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) RD05_RS07830 IPR011006 CheY-like superfamily RD05_RS07830 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS07830 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD05_RS07830 IPR025944 Sigma-54 interaction domain, conserved site RD05_RS07830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07835 IPR000847 Transcription regulator HTH, LysR RD05_RS07835 IPR005119 LysR, substrate-binding RD05_RS07835 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07840 IPR003829 Pirin, N-terminal domain RD05_RS07840 IPR011051 RmlC-like cupin domain RD05_RS07840 IPR012093 Pirin RD05_RS07840 IPR014710 RmlC-like jelly roll fold RD05_RS07845 IPR003829 Pirin, N-terminal domain RD05_RS07845 IPR008778 Pirin, C-terminal domain RD05_RS07845 IPR011051 RmlC-like cupin domain RD05_RS07845 IPR012093 Pirin RD05_RS07845 IPR014710 RmlC-like jelly roll fold RD05_RS07850 IPR001584 Integrase, catalytic core RD05_RS07850 IPR009057 Homeodomain-like RD05_RS07850 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07850 IPR012337 Ribonuclease H-like domain RD05_RS07850 IPR024967 DNA-binding domain, IS481-type RD05_RS07855 IPR003439 ABC transporter-like RD05_RS07855 IPR003593 AAA+ ATPase domain RD05_RS07855 IPR017871 ABC transporter, conserved site RD05_RS07855 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07860 IPR000515 MetI-like domain RD05_RS07865 IPR026045 Ferric binding protein RD05_RS07870 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS07870 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS07870 IPR008333 Oxidoreductase, FAD-binding domain RD05_RS07870 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS07875 IPR000847 Transcription regulator HTH, LysR RD05_RS07875 IPR005119 LysR, substrate-binding RD05_RS07875 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07885 IPR001395 Aldo/keto reductase RD05_RS07885 IPR018170 Aldo/keto reductase, conserved site RD05_RS07885 IPR020471 Aldo/keto reductase subgroup RD05_RS07885 IPR023210 NADP-dependent oxidoreductase domain RD05_RS07895 IPR006056 Enamine/imine deaminase YjgF-like RD05_RS07895 IPR006175 YjgF/Yer057p/UK114 family RD05_RS07895 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS07900 IPR001650 Helicase, C-terminal RD05_RS07900 IPR004609 ATP-dependent DNA helicase RecG RD05_RS07900 IPR011545 DEAD/DEAH box helicase domain RD05_RS07900 IPR012340 Nucleic acid-binding, OB-fold RD05_RS07900 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS07900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07900 IPR033454 RD05_RS07900 RD05_RS07905 IPR000847 Transcription regulator HTH, LysR RD05_RS07905 IPR005119 LysR, substrate-binding RD05_RS07905 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07910 IPR000847 Transcription regulator HTH, LysR RD05_RS07910 IPR005119 LysR, substrate-binding RD05_RS07910 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07915 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD05_RS07915 IPR015590 Aldehyde dehydrogenase domain RD05_RS07915 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS07915 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS07915 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS07915 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS07920 IPR002177 DNA-binding protein Dps RD05_RS07920 IPR008331 Ferritin/DPS protein domain RD05_RS07920 IPR009078 Ferritin-like superfamily RD05_RS07920 IPR012347 Ferritin-related RD05_RS07920 IPR023188 DNA-binding protein Dps, conserved site RD05_RS07925 IPR011990 Tetratricopeptide-like helical domain RD05_RS07940 IPR000412 ABC-2 transporter RD05_RS07940 IPR013525 ABC-2 type transporter RD05_RS07945 IPR003439 ABC transporter-like RD05_RS07945 IPR003593 AAA+ ATPase domain RD05_RS07945 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS07950 IPR003856 Lipopolysaccharide biosynthesis RD05_RS07955 IPR001296 Glycosyl transferase, family 1 RD05_RS07955 IPR011990 Tetratricopeptide-like helical domain RD05_RS07955 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS07965 IPR003715 Polysaccharide export protein RD05_RS07965 IPR019554 Soluble ligand binding domain RD05_RS07970 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD05_RS07970 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS07970 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD05_RS07970 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD05_RS07970 IPR016040 NAD(P)-binding domain RD05_RS07970 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD05_RS07970 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RD05_RS07975 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD05_RS07975 IPR008089 Nucleotide sugar epimerase RD05_RS07975 IPR016040 NAD(P)-binding domain RD05_RS07980 IPR007833 Capsule polysaccharide biosynthesis RD05_RS07985 IPR007833 Capsule polysaccharide biosynthesis RD05_RS07990 IPR001584 Integrase, catalytic core RD05_RS07990 IPR009057 Homeodomain-like RD05_RS07990 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS07990 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS07990 IPR012337 Ribonuclease H-like domain RD05_RS07990 IPR024967 DNA-binding domain, IS481-type RD05_RS07995 IPR002347 Glucose/ribitol dehydrogenase RD05_RS07995 IPR016040 NAD(P)-binding domain RD05_RS07995 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08000 IPR000917 Sulfatase RD05_RS08000 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD05_RS08000 IPR017850 Alkaline-phosphatase-like, core domain RD05_RS08005 IPR001584 Integrase, catalytic core RD05_RS08005 IPR009057 Homeodomain-like RD05_RS08005 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08005 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08005 IPR012337 Ribonuclease H-like domain RD05_RS08005 IPR024967 DNA-binding domain, IS481-type RD05_RS08010 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS08010 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD05_RS08010 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS08010 IPR028202 Reductase, C-terminal RD05_RS08015 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS08015 IPR009057 Homeodomain-like RD05_RS08015 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS08015 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS08020 IPR003439 ABC transporter-like RD05_RS08020 IPR003593 AAA+ ATPase domain RD05_RS08020 IPR017871 ABC transporter, conserved site RD05_RS08020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08025 IPR003439 ABC transporter-like RD05_RS08025 IPR003593 AAA+ ATPase domain RD05_RS08025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08025 IPR032823 RD05_RS08025 RD05_RS08035 IPR001584 Integrase, catalytic core RD05_RS08035 IPR009057 Homeodomain-like RD05_RS08035 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08035 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08035 IPR012337 Ribonuclease H-like domain RD05_RS08035 IPR024967 DNA-binding domain, IS481-type RD05_RS08040 IPR005496 Integral membrane protein TerC RD05_RS08040 IPR022301 Integral membrane protein YjbE RD05_RS08045 IPR002347 Glucose/ribitol dehydrogenase RD05_RS08045 IPR016040 NAD(P)-binding domain RD05_RS08045 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08050 IPR005064 Bordetella uptake gene RD05_RS08055 IPR025737 MetA-pathway of phenol degradation, putative RD05_RS08065 IPR011703 ATPase, AAA-3 RD05_RS08065 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RD05_RS08065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08070 IPR002881 Domain of unknown function DUF58 RD05_RS08075 IPR002035 von Willebrand factor, type A RD05_RS08080 IPR002035 von Willebrand factor, type A RD05_RS08080 IPR011990 Tetratricopeptide-like helical domain RD05_RS08080 IPR013105 Tetratricopeptide TPR2 RD05_RS08080 IPR019734 Tetratricopeptide repeat RD05_RS08085 IPR025738 Aerotolerance-related protein BatD RD05_RS08090 IPR023214 HAD-like domain RD05_RS08095 IPR000917 Sulfatase RD05_RS08095 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD05_RS08095 IPR017850 Alkaline-phosphatase-like, core domain RD05_RS08100 IPR020846 Major facilitator superfamily domain RD05_RS08105 IPR001584 Integrase, catalytic core RD05_RS08105 IPR009057 Homeodomain-like RD05_RS08105 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08105 IPR012337 Ribonuclease H-like domain RD05_RS08105 IPR024967 DNA-binding domain, IS481-type RD05_RS08115 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS08115 IPR011623 7TM-DISM receptor, extracellular domain, type 1 RD05_RS08120 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS08120 IPR001789 Signal transduction response regulator, receiver domain RD05_RS08120 IPR011006 CheY-like superfamily RD05_RS08120 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08120 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS08125 IPR005546 Autotransporter beta-domain RD05_RS08125 IPR006315 Outer membrane autotransporter barrel RD05_RS08125 IPR011050 Pectin lyase fold/virulence factor RD05_RS08125 IPR013425 Autotransporter-associated beta strand repeat RD05_RS08130 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS08130 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08135 IPR009387 Toxin HigB RD05_RS08140 IPR004045 Glutathione S-transferase, N-terminal RD05_RS08140 IPR004046 Glutathione S-transferase, C-terminal RD05_RS08140 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS08140 IPR012336 Thioredoxin-like fold RD05_RS08145 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD05_RS08150 IPR005119 LysR, substrate-binding RD05_RS08155 IPR005064 Bordetella uptake gene RD05_RS08160 IPR002347 Glucose/ribitol dehydrogenase RD05_RS08160 IPR016040 NAD(P)-binding domain RD05_RS08165 IPR000262 FMN-dependent dehydrogenase RD05_RS08165 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD05_RS08165 IPR013785 Aldolase-type TIM barrel RD05_RS08170 IPR011234 Fumarylacetoacetase, C-terminal-related RD05_RS08175 IPR002347 Glucose/ribitol dehydrogenase RD05_RS08175 IPR016040 NAD(P)-binding domain RD05_RS08180 IPR002347 Glucose/ribitol dehydrogenase RD05_RS08180 IPR016040 NAD(P)-binding domain RD05_RS08180 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08185 IPR005064 Bordetella uptake gene RD05_RS08190 IPR000847 Transcription regulator HTH, LysR RD05_RS08190 IPR005119 LysR, substrate-binding RD05_RS08190 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08195 IPR005064 Bordetella uptake gene RD05_RS08210 IPR001584 Integrase, catalytic core RD05_RS08210 IPR009057 Homeodomain-like RD05_RS08210 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08210 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08210 IPR012337 Ribonuclease H-like domain RD05_RS08210 IPR024967 DNA-binding domain, IS481-type RD05_RS08220 IPR005025 NADPH-dependent FMN reductase-like RD05_RS08220 IPR014063 Arsenate resistance ArsH RD05_RS08220 IPR029039 Flavoprotein-like RD05_RS08230 IPR011701 Major facilitator superfamily RD05_RS08230 IPR020846 Major facilitator superfamily domain RD05_RS08235 IPR001845 HTH ArsR-type DNA-binding domain RD05_RS08235 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08245 IPR005064 Bordetella uptake gene RD05_RS08250 IPR002347 Glucose/ribitol dehydrogenase RD05_RS08250 IPR016040 NAD(P)-binding domain RD05_RS08250 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08255 IPR000847 Transcription regulator HTH, LysR RD05_RS08255 IPR005119 LysR, substrate-binding RD05_RS08255 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08265 IPR001584 Integrase, catalytic core RD05_RS08265 IPR009057 Homeodomain-like RD05_RS08265 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08265 IPR012337 Ribonuclease H-like domain RD05_RS08265 IPR024967 DNA-binding domain, IS481-type RD05_RS08270 IPR005064 Bordetella uptake gene RD05_RS08275 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RD05_RS08275 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD05_RS08275 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RD05_RS08275 IPR025383 Domain of unknown function DUF4040 RD05_RS08280 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RD05_RS08285 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD05_RS08290 IPR002758 Na+/H+ antiporter subunit E RD05_RS08295 IPR007208 Na(+)/H(+) antiporter subunit F-like RD05_RS08300 IPR005133 Na+/H+ antiporter subunit G RD05_RS08305 IPR001584 Integrase, catalytic core RD05_RS08305 IPR009057 Homeodomain-like RD05_RS08305 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08305 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08305 IPR012337 Ribonuclease H-like domain RD05_RS08305 IPR024967 DNA-binding domain, IS481-type RD05_RS08315 IPR023214 HAD-like domain RD05_RS08320 IPR016192 APOBEC/CMP deaminase, zinc-binding RD05_RS08320 IPR016193 Cytidine deaminase-like RD05_RS08320 IPR028883 tRNA-specific adenosine deaminase RD05_RS08325 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RD05_RS08325 IPR027461 LD-carboxypeptidase A, C-terminal domain RD05_RS08325 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RD05_RS08325 IPR029062 Class I glutamine amidotransferase-like RD05_RS08330 IPR001753 Crotonase superfamily RD05_RS08330 IPR014748 Crontonase, C-terminal RD05_RS08330 IPR029045 ClpP/crotonase-like domain RD05_RS08335 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS08340 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS08345 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS08345 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD05_RS08350 IPR003439 ABC transporter-like RD05_RS08350 IPR003593 AAA+ ATPase domain RD05_RS08350 IPR017871 ABC transporter, conserved site RD05_RS08350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08350 IPR032781 RD05_RS08350 RD05_RS08355 IPR003439 ABC transporter-like RD05_RS08355 IPR003593 AAA+ ATPase domain RD05_RS08355 IPR017871 ABC transporter, conserved site RD05_RS08355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08360 IPR015168 SsuA/THI5-like RD05_RS08365 IPR000515 MetI-like domain RD05_RS08370 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS08375 IPR001584 Integrase, catalytic core RD05_RS08375 IPR009057 Homeodomain-like RD05_RS08375 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08375 IPR012337 Ribonuclease H-like domain RD05_RS08375 IPR024967 DNA-binding domain, IS481-type RD05_RS08380 IPR001584 Integrase, catalytic core RD05_RS08380 IPR009057 Homeodomain-like RD05_RS08380 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08380 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08380 IPR012337 Ribonuclease H-like domain RD05_RS08380 IPR024967 DNA-binding domain, IS481-type RD05_RS08385 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RD05_RS08385 IPR019004 Uncharacterised domain YOR215C, mitochondrial RD05_RS08385 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RD05_RS08390 IPR000971 Globin RD05_RS08390 IPR001221 Phenol hydroxylase reductase RD05_RS08390 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS08390 IPR008333 Oxidoreductase, FAD-binding domain RD05_RS08390 IPR009050 Globin-like RD05_RS08390 IPR012292 Globin, structural domain RD05_RS08390 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS08390 IPR023950 Flavohemoprotein RD05_RS08395 IPR000944 Transcription regulator Rrf2-like RD05_RS08395 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08400 IPR006076 FAD dependent oxidoreductase RD05_RS08400 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS08410 IPR001584 Integrase, catalytic core RD05_RS08410 IPR009057 Homeodomain-like RD05_RS08410 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08410 IPR012337 Ribonuclease H-like domain RD05_RS08410 IPR024967 DNA-binding domain, IS481-type RD05_RS08415 IPR017703 YgfZ/GcvT conserved site RD05_RS08420 IPR003770 Uncharacterised protein family UPF0755, YceG-like RD05_RS08420 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain RD05_RS08425 IPR018094 Thymidylate kinase RD05_RS08425 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08430 IPR004622 DNA polymerase III, delta prime subunit RD05_RS08430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08435 IPR001130 TatD family RD05_RS08435 IPR015991 Uncharacterised deoxyribonuclease TatD-type RD05_RS08435 IPR018228 Deoxyribonuclease, TatD-related, conserved site RD05_RS08435 IPR032466 RD05_RS08435 RD05_RS08440 IPR002110 Ankyrin repeat RD05_RS08440 IPR020683 Ankyrin repeat-containing domain RD05_RS08445 IPR005471 Transcription regulator IclR, N-terminal RD05_RS08445 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08445 IPR014757 Transcription regulator IclR, C-terminal RD05_RS08445 IPR029016 GAF domain-like RD05_RS08450 IPR001320 Ionotropic glutamate receptor RD05_RS08450 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS08450 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD05_RS08460 IPR003439 ABC transporter-like RD05_RS08460 IPR003593 AAA+ ATPase domain RD05_RS08460 IPR017871 ABC transporter, conserved site RD05_RS08460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08460 IPR030679 RD05_RS08460 RD05_RS08465 IPR023696 Ureohydrolase domain RD05_RS08470 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RD05_RS08470 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RD05_RS08470 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RD05_RS08470 IPR014362 Glutamate dehydrogenase RD05_RS08470 IPR016040 NAD(P)-binding domain RD05_RS08475 IPR015590 Aldehyde dehydrogenase domain RD05_RS08475 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS08475 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS08475 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS08475 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS08475 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS08480 IPR002933 Peptidase M20 RD05_RS08480 IPR010158 Amidase, hydantoinase/carbamoylase RD05_RS08480 IPR011650 Peptidase M20, dimerisation domain RD05_RS08485 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS08485 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS08485 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS08485 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS08485 IPR029061 Thiamin diphosphate-binding fold RD05_RS08490 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD05_RS08490 IPR011206 Citrate lyase beta subunit-like RD05_RS08490 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS08495 IPR004681 TRAP transporter permease protein RD05_RS08495 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS08500 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS08505 IPR004682 TRAP dicarboxylate transporter RD05_RS08505 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS08510 IPR000524 Transcription regulator HTH, GntR RD05_RS08510 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS08510 IPR011711 GntR, C-terminal RD05_RS08510 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08515 IPR001584 Integrase, catalytic core RD05_RS08515 IPR009057 Homeodomain-like RD05_RS08515 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08515 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08515 IPR012337 Ribonuclease H-like domain RD05_RS08515 IPR024967 DNA-binding domain, IS481-type RD05_RS08520 IPR007438 Protein of unknown function DUF488 RD05_RS08525 IPR001584 Integrase, catalytic core RD05_RS08525 IPR012337 Ribonuclease H-like domain RD05_RS08540 IPR000120 Amidase RD05_RS08540 IPR023631 Amidase signature domain RD05_RS08545 IPR009906 Protein of unknown function DUF1445 RD05_RS08545 IPR016938 Uncharacterised protein family UPF0317 RD05_RS08550 IPR001633 EAL domain RD05_RS08555 IPR000014 PAS domain RD05_RS08555 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS08555 IPR001789 Signal transduction response regulator, receiver domain RD05_RS08555 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS08555 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS08555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS08555 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RD05_RS08555 IPR011006 CheY-like superfamily RD05_RS08555 IPR013767 PAS fold RD05_RS08560 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS08560 IPR001789 Signal transduction response regulator, receiver domain RD05_RS08560 IPR011006 CheY-like superfamily RD05_RS08560 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08565 IPR008619 Filamentous haemagglutinin repeat RD05_RS08565 IPR008638 Filamentous haemagglutinin, N-terminal RD05_RS08565 IPR011050 Pectin lyase fold/virulence factor RD05_RS08565 IPR012334 Pectin lyase fold RD05_RS08565 IPR024973 ESPR domain RD05_RS08565 IPR025157 Haemagluttinin repeat RD05_RS08570 IPR000259 Fimbrial-type adhesion domain RD05_RS08570 IPR008966 Adhesion domain RD05_RS08575 IPR001829 Pili assembly chaperone, bacterial RD05_RS08575 IPR008962 PapD-like RD05_RS08575 IPR016147 PapD, N-terminal, bacterial RD05_RS08575 IPR016148 Pili assembly chaperone, C-terminal domain RD05_RS08575 IPR018046 Pili assembly chaperone, conserved site RD05_RS08580 IPR000015 Outer membrane usher protein RD05_RS08580 IPR018030 Fimbrial membrane usher, conserved site RD05_RS08580 IPR025885 PapC, N-terminal domain RD05_RS08580 IPR025949 PapC-like, C-terminal domain RD05_RS08585 IPR000259 Fimbrial-type adhesion domain RD05_RS08585 IPR008966 Adhesion domain RD05_RS08590 IPR005565 Haemolysin activator HlyB RD05_RS08590 IPR013686 Polypeptide-transport-associated, ShlB-type RD05_RS08590 IPR027282 Two partner secretion pathway transporter RD05_RS08600 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS08605 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS08615 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS08620 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS08630 IPR000847 Transcription regulator HTH, LysR RD05_RS08630 IPR005119 LysR, substrate-binding RD05_RS08630 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08635 IPR000835 MarR-type HTH domain RD05_RS08635 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08635 IPR014601 Transcriptional regulator with MarR-type HTH domain RD05_RS08640 IPR002821 Hydantoinase/oxoprolinase RD05_RS08640 IPR003692 Hydantoinase B/oxoprolinase RD05_RS08640 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD05_RS08645 IPR005079 Peptidase C45 RD05_RS08655 IPR006685 Mechanosensitive ion channel MscS RD05_RS08655 IPR010920 Like-Sm (LSM) domain RD05_RS08655 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RD05_RS08655 IPR011066 Mechanosensitive ion channel MscS, C-terminal RD05_RS08660 IPR005471 Transcription regulator IclR, N-terminal RD05_RS08660 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08660 IPR014757 Transcription regulator IclR, C-terminal RD05_RS08660 IPR029016 GAF domain-like RD05_RS08665 IPR005064 Bordetella uptake gene RD05_RS08670 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD05_RS08670 IPR004384 RNA methyltransferase TrmH, group 1 RD05_RS08670 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS08670 IPR029028 Alpha/beta knot methyltransferases RD05_RS08675 IPR000760 Inositol monophosphatase RD05_RS08675 IPR020550 Inositol monophosphatase, conserved site RD05_RS08675 IPR020583 Inositol monophosphatase, metal-binding site RD05_RS08675 IPR022337 Inositol monophosphatase, SuhB RD05_RS08680 IPR000644 CBS domain RD05_RS08680 IPR005170 Transporter-associated domain RD05_RS08680 IPR005496 Integral membrane protein TerC RD05_RS08680 IPR016166 FAD-binding, type 2 RD05_RS08680 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS08685 IPR003824 Undecaprenyl-diphosphatase UppP RD05_RS08690 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD05_RS08690 IPR010138 UDP-2,3-diacylglucosamine hydrolase RD05_RS08690 IPR029052 Metallo-dependent phosphatase-like RD05_RS08695 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RD05_RS08695 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RD05_RS08695 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RD05_RS08695 IPR029000 Cyclophilin-like domain RD05_RS08700 IPR011990 Tetratricopeptide-like helical domain RD05_RS08700 IPR019734 Tetratricopeptide repeat RD05_RS08705 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD05_RS08705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS08705 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RD05_RS08705 IPR015803 Cysteine-tRNA ligase RD05_RS08705 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RD05_RS08705 IPR032678 RD05_RS08705 RD05_RS08710 IPR003265 HhH-GPD domain RD05_RS08710 IPR011257 DNA glycosylase RD05_RS08710 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD05_RS08715 IPR001095 Acetyl-CoA carboxylase, alpha subunit RD05_RS08715 IPR029045 ClpP/crotonase-like domain RD05_RS08720 IPR001584 Integrase, catalytic core RD05_RS08720 IPR009057 Homeodomain-like RD05_RS08720 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08720 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08720 IPR012337 Ribonuclease H-like domain RD05_RS08720 IPR024967 DNA-binding domain, IS481-type RD05_RS08725 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RD05_RS08725 IPR012094 Lysidine-tRNA(Ile) synthetase RD05_RS08725 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal RD05_RS08725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS08725 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain RD05_RS08730 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS08730 IPR001057 Glutamate/acetylglutamate kinase RD05_RS08730 IPR001341 Aspartate kinase domain RD05_RS08730 IPR002912 ACT domain RD05_RS08730 IPR005260 Aspartate kinase, monofunctional class RD05_RS08730 IPR018042 Aspartate kinase, conserved site RD05_RS08730 IPR027795 GATS-like ACT domain RD05_RS08740 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS08740 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS08745 IPR011051 RmlC-like cupin domain RD05_RS08745 IPR013096 Cupin 2, conserved barrel RD05_RS08745 IPR014710 RmlC-like jelly roll fold RD05_RS08750 IPR011008 Dimeric alpha-beta barrel RD05_RS08750 IPR012577 NIPSNAP RD05_RS08755 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS08755 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS08755 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD05_RS08755 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS08755 IPR013328 Dehydrogenase, multihelical RD05_RS08755 IPR016040 NAD(P)-binding domain RD05_RS08760 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS08765 IPR004681 TRAP transporter permease protein RD05_RS08765 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS08770 IPR004682 TRAP dicarboxylate transporter RD05_RS08770 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS08775 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS08775 IPR029058 Alpha/Beta hydrolase fold RD05_RS08780 IPR002811 Aspartate dehydrogenase RD05_RS08780 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD05_RS08780 IPR011182 L-aspartate dehydrogenase RD05_RS08780 IPR016040 NAD(P)-binding domain RD05_RS08780 IPR020626 L-aspartate dehydrogenase, prokaryotic RD05_RS08785 IPR002347 Glucose/ribitol dehydrogenase RD05_RS08785 IPR016040 NAD(P)-binding domain RD05_RS08785 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS08790 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS08790 IPR009057 Homeodomain-like RD05_RS08790 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS08790 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS08795 IPR000847 Transcription regulator HTH, LysR RD05_RS08795 IPR005119 LysR, substrate-binding RD05_RS08795 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08805 IPR011059 Metal-dependent hydrolase, composite domain RD05_RS08805 IPR013108 Amidohydrolase 3 RD05_RS08805 IPR032466 RD05_RS08805 RD05_RS08810 IPR011059 Metal-dependent hydrolase, composite domain RD05_RS08810 IPR013108 Amidohydrolase 3 RD05_RS08815 IPR000515 MetI-like domain RD05_RS08820 IPR000515 MetI-like domain RD05_RS08825 IPR003439 ABC transporter-like RD05_RS08825 IPR003593 AAA+ ATPase domain RD05_RS08825 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS08825 IPR013611 Transport-associated OB, type 2 RD05_RS08825 IPR017871 ABC transporter, conserved site RD05_RS08825 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08835 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD05_RS08835 IPR013785 Aldolase-type TIM barrel RD05_RS08840 IPR005471 Transcription regulator IclR, N-terminal RD05_RS08840 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08840 IPR014757 Transcription regulator IclR, C-terminal RD05_RS08840 IPR029016 GAF domain-like RD05_RS08845 IPR003781 CoA-binding RD05_RS08845 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS08845 IPR016040 NAD(P)-binding domain RD05_RS08845 IPR016102 Succinyl-CoA synthetase-like RD05_RS08845 IPR032875 RD05_RS08845 RD05_RS08850 IPR005064 Bordetella uptake gene RD05_RS08855 IPR006175 YjgF/Yer057p/UK114 family RD05_RS08855 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS08860 IPR002539 MaoC-like domain RD05_RS08860 IPR029069 HotDog domain RD05_RS08865 IPR002539 MaoC-like domain RD05_RS08865 IPR029069 HotDog domain RD05_RS08870 IPR029069 HotDog domain RD05_RS08875 IPR001845 HTH ArsR-type DNA-binding domain RD05_RS08875 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08880 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD05_RS08880 IPR013785 Aldolase-type TIM barrel RD05_RS08890 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA RD05_RS08890 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS08895 IPR002509 Polysaccharide deacetylase RD05_RS08895 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS08895 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB RD05_RS08895 IPR032772 RD05_RS08895 RD05_RS08900 IPR011990 Tetratricopeptide-like helical domain RD05_RS08900 IPR019734 Tetratricopeptide repeat RD05_RS08900 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA RD05_RS08915 IPR000835 MarR-type HTH domain RD05_RS08915 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08920 IPR001584 Integrase, catalytic core RD05_RS08920 IPR009057 Homeodomain-like RD05_RS08920 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS08920 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08920 IPR012337 Ribonuclease H-like domain RD05_RS08920 IPR024967 DNA-binding domain, IS481-type RD05_RS08925 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS08925 IPR011006 CheY-like superfamily RD05_RS08925 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08925 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS08930 IPR005841 Alpha-D-phosphohexomutase superfamily RD05_RS08930 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD05_RS08930 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD05_RS08930 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD05_RS08930 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD05_RS08930 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD05_RS08935 IPR001672 Phosphoglucose isomerase (PGI) RD05_RS08940 IPR001451 Bacterial transferase hexapeptide repeat RD05_RS08940 IPR011004 Trimeric LpxA-like RD05_RS08945 IPR011701 Major facilitator superfamily RD05_RS08945 IPR020846 Major facilitator superfamily domain RD05_RS08950 IPR003000 Sirtuin family RD05_RS08950 IPR026587 Sirtuin, class II RD05_RS08950 IPR026591 Sirtuin family, catalytic core small domain RD05_RS08950 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS08955 IPR000760 Inositol monophosphatase RD05_RS08960 IPR010102 Succinate semialdehyde dehydrogenase RD05_RS08960 IPR015590 Aldehyde dehydrogenase domain RD05_RS08960 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS08960 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS08960 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS08960 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS08960 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS08965 IPR004632 4-aminobutyrate aminotransferase, bacterial RD05_RS08965 IPR005814 Aminotransferase class-III RD05_RS08965 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS08965 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS08965 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS08970 IPR000524 Transcription regulator HTH, GntR RD05_RS08970 IPR004839 Aminotransferase, class I/classII RD05_RS08970 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS08970 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS08970 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS08970 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS08975 IPR002763 Protein of unknown function DUF72 RD05_RS08980 IPR000212 DNA helicase, UvrD/REP type RD05_RS08980 IPR014016 UvrD-like Helicase, ATP-binding domain RD05_RS08980 IPR014017 DNA helicase, UvrD-like, C-terminal RD05_RS08980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS08985 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RD05_RS08990 IPR002071 Thermonuclease active site RD05_RS08990 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RD05_RS08995 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS09000 IPR000515 MetI-like domain RD05_RS09005 IPR000515 MetI-like domain RD05_RS09010 IPR003439 ABC transporter-like RD05_RS09010 IPR003593 AAA+ ATPase domain RD05_RS09010 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS09010 IPR017871 ABC transporter, conserved site RD05_RS09010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09015 IPR000835 MarR-type HTH domain RD05_RS09015 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09020 IPR001584 Integrase, catalytic core RD05_RS09020 IPR009057 Homeodomain-like RD05_RS09020 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09020 IPR012337 Ribonuclease H-like domain RD05_RS09020 IPR024967 DNA-binding domain, IS481-type RD05_RS09030 IPR013686 Polypeptide-transport-associated, ShlB-type RD05_RS09035 IPR005330 MHYT RD05_RS09040 IPR007047 Flp/Fap pilin component RD05_RS09045 IPR000045 Prepilin type IV endopeptidase, peptidase domain RD05_RS09050 IPR012495 TadE-like RD05_RS09055 IPR012495 TadE-like RD05_RS09060 IPR013974 SAF domain RD05_RS09060 IPR017592 Pilus assembly, Flp-type CpaB RD05_RS09060 IPR031571 RD05_RS09060 RD05_RS09065 IPR001775 GspD/PilQ family RD05_RS09065 IPR004846 Type II/III secretion system RD05_RS09065 IPR032789 RD05_RS09065 RD05_RS09070 IPR011006 CheY-like superfamily RD05_RS09070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09075 IPR001482 Type II secretion system protein E RD05_RS09075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09080 IPR018076 Type II secretion system F domain RD05_RS09085 IPR018076 Type II secretion system F domain RD05_RS09090 IPR011990 Tetratricopeptide-like helical domain RD05_RS09090 IPR016931 Uncharacterised conserved protein UCP029658, TPR RD05_RS09090 IPR019734 Tetratricopeptide repeat RD05_RS09100 IPR018705 Domain of unknown function DUF2134, membrane RD05_RS09105 IPR002078 RNA polymerase sigma factor 54 interaction domain RD05_RS09105 IPR002197 DNA binding HTH domain, Fis-type RD05_RS09105 IPR003593 AAA+ ATPase domain RD05_RS09105 IPR009057 Homeodomain-like RD05_RS09105 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS09105 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD05_RS09105 IPR025944 Sigma-54 interaction domain, conserved site RD05_RS09105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09110 IPR021350 Protein of unknown function DUF2968 RD05_RS09115 IPR009562 Protein of unknown function DUF1178 RD05_RS09120 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS09120 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09120 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS09120 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS09120 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS09120 IPR014284 RNA polymerase sigma-70 like domain RD05_RS09125 IPR009078 Ferritin-like superfamily RD05_RS09125 IPR012347 Ferritin-related RD05_RS09130 IPR002327 Cytochrome c, class IA/ IB RD05_RS09130 IPR009056 Cytochrome c-like domain RD05_RS09135 IPR001059 Translation elongation factor P/YeiP, central RD05_RS09135 IPR008991 Translation protein SH3-like domain RD05_RS09135 IPR011768 Translation elongation factor P RD05_RS09135 IPR012340 Nucleic acid-binding, OB-fold RD05_RS09135 IPR013185 Translation elongation factor, KOW-like RD05_RS09135 IPR013852 Translation elongation factor P/YeiP, conserved site RD05_RS09135 IPR014722 Ribosomal protein L2 domain 2 RD05_RS09135 IPR015365 Elongation factor P, C-terminal RD05_RS09135 IPR020599 Translation elongation factor P/YeiP RD05_RS09140 IPR016633 Uncharacterised conserved protein UCP015557 RD05_RS09145 IPR021292 Protein of unknown function DUF2863 RD05_RS09150 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RD05_RS09150 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type RD05_RS09155 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD05_RS09155 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD05_RS09155 IPR006249 Aconitate/iron regulatory protein 2 RD05_RS09155 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS09155 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD05_RS09155 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD05_RS09155 IPR015937 Aconitase/isopropylmalate dehydratase RD05_RS09155 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD05_RS09160 IPR023346 Lysozyme-like domain RD05_RS09165 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS09165 IPR010105 TonB-dependent siderophore receptor RD05_RS09165 IPR010917 TonB-dependent receptor, conserved site RD05_RS09165 IPR012910 TonB-dependent receptor, plug RD05_RS09165 IPR030149 RD05_RS09165 RD05_RS09170 IPR006328 Haloacid dehalogenase, type II RD05_RS09170 IPR006439 HAD hydrolase, subfamily IA RD05_RS09170 IPR023214 HAD-like domain RD05_RS09175 IPR001584 Integrase, catalytic core RD05_RS09175 IPR009057 Homeodomain-like RD05_RS09175 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09175 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09175 IPR012337 Ribonuclease H-like domain RD05_RS09175 IPR024967 DNA-binding domain, IS481-type RD05_RS09180 IPR006664 Outer membrane protein, bacterial RD05_RS09180 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD05_RS09190 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD05_RS09190 IPR004406 Aconitase B, bacterial RD05_RS09190 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS09190 IPR015929 Aconitase B, N-terminal, bacterial RD05_RS09190 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD05_RS09190 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD05_RS09190 IPR015933 Aconitase B, HEAT-like, bacterial RD05_RS09190 IPR015937 Aconitase/isopropylmalate dehydratase RD05_RS09190 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD05_RS09195 IPR012337 Ribonuclease H-like domain RD05_RS09195 IPR013520 Exonuclease, RNase T/DNA polymerase III RD05_RS09200 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 RD05_RS09200 IPR025984 MazG-like domain RD05_RS09205 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD05_RS09205 IPR011008 Dimeric alpha-beta barrel RD05_RS09210 IPR005545 YCII-related RD05_RS09210 IPR011008 Dimeric alpha-beta barrel RD05_RS09215 IPR000620 Drug/metabolite transporter RD05_RS09220 IPR002781 Transmembrane protein TauE like RD05_RS09230 IPR001584 Integrase, catalytic core RD05_RS09230 IPR009057 Homeodomain-like RD05_RS09230 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09230 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09230 IPR012337 Ribonuclease H-like domain RD05_RS09230 IPR024967 DNA-binding domain, IS481-type RD05_RS09235 IPR000847 Transcription regulator HTH, LysR RD05_RS09235 IPR005119 LysR, substrate-binding RD05_RS09235 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09240 IPR003702 Acetyl-CoA hydrolase/transferase RD05_RS09240 IPR017821 Succinate CoA transferase RD05_RS09240 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RD05_RS09250 IPR000847 Transcription regulator HTH, LysR RD05_RS09250 IPR005119 LysR, substrate-binding RD05_RS09250 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09285 IPR023006 Uncharacterised protein family UPF0225 RD05_RS09285 IPR032710 RD05_RS09285 RD05_RS09290 IPR016181 Acyl-CoA N-acyltransferase RD05_RS09290 IPR031165 RD05_RS09290 RD05_RS09295 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS09295 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS09295 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS09295 IPR016040 NAD(P)-binding domain RD05_RS09300 IPR000120 Amidase RD05_RS09300 IPR020556 Amidase, conserved site RD05_RS09300 IPR023631 Amidase signature domain RD05_RS09310 IPR000965 Gamma-glutamyl phosphate reductase GPR RD05_RS09310 IPR012134 Glutamate-5-semialdehyde dehydrogenase RD05_RS09310 IPR015590 Aldehyde dehydrogenase domain RD05_RS09310 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS09310 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS09310 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS09310 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site RD05_RS09315 IPR005790 DNA polymerase III, delta subunit RD05_RS09315 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD05_RS09315 IPR010372 DNA polymerase III, delta RD05_RS09315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09320 IPR007485 Lipopolysaccharide assembly, LptE RD05_RS09325 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS09325 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD05_RS09325 IPR002302 Leucine-tRNA ligase RD05_RS09325 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD05_RS09325 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD05_RS09325 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD05_RS09325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS09325 IPR015413 Methionyl/Leucyl tRNA synthetase RD05_RS09325 IPR025709 Leucyl-tRNA synthetase, editing domain RD05_RS09330 IPR011701 Major facilitator superfamily RD05_RS09330 IPR020846 Major facilitator superfamily domain RD05_RS09335 IPR000835 MarR-type HTH domain RD05_RS09335 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09340 IPR000119 Histone-like bacterial DNA-binding protein RD05_RS09340 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD05_RS09345 IPR001584 Integrase, catalytic core RD05_RS09345 IPR009057 Homeodomain-like RD05_RS09345 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09345 IPR012337 Ribonuclease H-like domain RD05_RS09345 IPR024967 DNA-binding domain, IS481-type RD05_RS09350 IPR001584 Integrase, catalytic core RD05_RS09350 IPR009057 Homeodomain-like RD05_RS09350 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09350 IPR012337 Ribonuclease H-like domain RD05_RS09350 IPR024967 DNA-binding domain, IS481-type RD05_RS09355 IPR001902 Sulphate anion transporter RD05_RS09355 IPR002645 STAS domain RD05_RS09355 IPR011547 Sulphate transporter RD05_RS09360 IPR001705 Ribosomal protein L33 RD05_RS09360 IPR011332 Zinc-binding ribosomal protein RD05_RS09365 IPR001383 Ribosomal protein L28 RD05_RS09365 IPR026569 Ribosomal protein L28/L24 RD05_RS09370 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RD05_RS09370 IPR011701 Major facilitator superfamily RD05_RS09370 IPR020846 Major facilitator superfamily domain RD05_RS09375 IPR003333 Mycolic acid cyclopropane synthase RD05_RS09375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS09380 IPR001584 Integrase, catalytic core RD05_RS09380 IPR009057 Homeodomain-like RD05_RS09380 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09380 IPR012337 Ribonuclease H-like domain RD05_RS09380 IPR024967 DNA-binding domain, IS481-type RD05_RS09385 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RD05_RS09390 IPR000515 MetI-like domain RD05_RS09395 IPR003439 ABC transporter-like RD05_RS09395 IPR003593 AAA+ ATPase domain RD05_RS09395 IPR005892 Glycine betaine transport ATP-binding subunit RD05_RS09395 IPR017871 ABC transporter, conserved site RD05_RS09395 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09400 IPR004370 4-oxalocrotonate tautomerase RD05_RS09400 IPR014347 Tautomerase/MIF superfamily RD05_RS09405 IPR002155 Thiolase RD05_RS09405 IPR016039 Thiolase-like RD05_RS09405 IPR020610 Thiolase, active site RD05_RS09405 IPR020615 Thiolase, acyl-enzyme intermediate active site RD05_RS09405 IPR020616 Thiolase, N-terminal RD05_RS09405 IPR020617 Thiolase, C-terminal RD05_RS09410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS09415 IPR000524 Transcription regulator HTH, GntR RD05_RS09415 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS09415 IPR011711 GntR, C-terminal RD05_RS09415 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09420 IPR007956 Malonyl-CoA decarboxylase RD05_RS09425 IPR001753 Crotonase superfamily RD05_RS09425 IPR029045 ClpP/crotonase-like domain RD05_RS09435 IPR005064 Bordetella uptake gene RD05_RS09440 IPR001424 Superoxide dismutase, copper/zinc binding domain RD05_RS09440 IPR018152 Superoxide dismutase, copper/zinc, binding site RD05_RS09440 IPR024134 RD05_RS09440 RD05_RS09445 IPR007487 ABC transporter, substrate-binding protein RD05_RS09445 IPR028082 Periplasmic binding protein-like I RD05_RS09455 IPR003439 ABC transporter-like RD05_RS09455 IPR003593 AAA+ ATPase domain RD05_RS09455 IPR017871 ABC transporter, conserved site RD05_RS09455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09460 IPR000847 Transcription regulator HTH, LysR RD05_RS09460 IPR003725 Molybdenum-binding protein, N-terminal RD05_RS09460 IPR004606 Molybdenum-pterin binding RD05_RS09460 IPR005116 Transport-associated OB, type 1 RD05_RS09460 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS09460 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09460 IPR016462 Molybdate-dependent transcriptional regulator, ModE RD05_RS09465 IPR025411 Domain of unknown function DUF4136 RD05_RS09470 IPR001227 Acyl transferase domain RD05_RS09470 IPR002641 Patatin/Phospholipase A2-related RD05_RS09470 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD05_RS09470 IPR021095 Protein of unknown function DUF3734 RD05_RS09475 IPR001867 Signal transduction response regulator, C-terminal RD05_RS09475 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09475 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS09480 IPR006143 RND efflux pump, membrane fusion protein RD05_RS09480 IPR032317 RD05_RS09480 RD05_RS09485 IPR001036 Acriflavin resistance protein RD05_RS09485 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RD05_RS09485 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS09490 IPR003423 Outer membrane efflux protein RD05_RS09495 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ RD05_RS09495 IPR013785 Aldolase-type TIM barrel RD05_RS09500 IPR002582 Holo-[acyl carrier protein] synthase RD05_RS09500 IPR004568 Phosphopantethiene-protein transferase domain RD05_RS09500 IPR008278 4'-phosphopantetheinyl transferase superfamily RD05_RS09505 IPR001764 Glycoside hydrolase, family 3, N-terminal RD05_RS09505 IPR017853 Glycoside hydrolase, superfamily RD05_RS09505 IPR019800 Glycoside hydrolase, family 3, active site RD05_RS09505 IPR022956 Beta-hexosaminidase, bacterial RD05_RS09510 IPR000305 GIY-YIG nuclease superfamily RD05_RS09510 IPR001162 UvrC family homology region RD05_RS09510 IPR001943 UVR domain RD05_RS09510 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD05_RS09510 IPR004791 UvrABC system, subunit C RD05_RS09510 IPR010994 RuvA domain 2-like RD05_RS09510 IPR027299 GIY-YIG domain RD05_RS09515 IPR000462 CDP-alcohol phosphatidyltransferase RD05_RS09515 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RD05_RS09520 IPR011701 Major facilitator superfamily RD05_RS09520 IPR020846 Major facilitator superfamily domain RD05_RS09525 IPR020846 Major facilitator superfamily domain RD05_RS09530 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RD05_RS09530 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RD05_RS09530 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RD05_RS09535 IPR006254 Isocitrate lyase RD05_RS09535 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS09535 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RD05_RS09545 IPR001584 Integrase, catalytic core RD05_RS09545 IPR009057 Homeodomain-like RD05_RS09545 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09545 IPR012337 Ribonuclease H-like domain RD05_RS09545 IPR024967 DNA-binding domain, IS481-type RD05_RS09550 IPR001851 ABC transporter, permease RD05_RS09555 IPR001851 ABC transporter, permease RD05_RS09560 IPR028081 Leucine-binding protein domain RD05_RS09560 IPR028082 Periplasmic binding protein-like I RD05_RS09565 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RD05_RS09565 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD05_RS09565 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD05_RS09565 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS09570 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD05_RS09570 IPR032710 RD05_RS09570 RD05_RS09575 IPR001753 Crotonase superfamily RD05_RS09575 IPR029045 ClpP/crotonase-like domain RD05_RS09580 IPR002347 Glucose/ribitol dehydrogenase RD05_RS09580 IPR016040 NAD(P)-binding domain RD05_RS09580 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS09585 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS09585 IPR001055 Adrenodoxin RD05_RS09585 IPR012675 Beta-grasp domain RD05_RS09585 IPR018298 Adrenodoxin, iron-sulphur binding site RD05_RS09590 IPR003673 CoA-transferase family III RD05_RS09590 IPR023606 CoA-transferase family III domain RD05_RS09595 IPR013094 Alpha/beta hydrolase fold-3 RD05_RS09595 IPR029058 Alpha/Beta hydrolase fold RD05_RS09600 IPR000873 AMP-dependent synthetase/ligase RD05_RS09600 IPR028154 AMP-dependent ligase, C-terminal RD05_RS09605 IPR002155 Thiolase RD05_RS09605 IPR016039 Thiolase-like RD05_RS09605 IPR020616 Thiolase, N-terminal RD05_RS09605 IPR020617 Thiolase, C-terminal RD05_RS09610 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD05_RS09610 IPR012340 Nucleic acid-binding, OB-fold RD05_RS09610 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD05_RS09610 IPR016039 Thiolase-like RD05_RS09615 IPR016195 Polymerase/histidinol phosphatase-like RD05_RS09615 IPR022028 Protein of unknown function DUF3604 RD05_RS09620 IPR000847 Transcription regulator HTH, LysR RD05_RS09620 IPR005119 LysR, substrate-binding RD05_RS09620 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09625 IPR005064 Bordetella uptake gene RD05_RS09630 IPR001584 Integrase, catalytic core RD05_RS09630 IPR009057 Homeodomain-like RD05_RS09630 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09630 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09630 IPR012337 Ribonuclease H-like domain RD05_RS09630 IPR024967 DNA-binding domain, IS481-type RD05_RS09635 IPR001584 Integrase, catalytic core RD05_RS09635 IPR009057 Homeodomain-like RD05_RS09635 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09635 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09635 IPR012337 Ribonuclease H-like domain RD05_RS09635 IPR024967 DNA-binding domain, IS481-type RD05_RS09640 IPR011893 Selenoprotein, Rdx type RD05_RS09640 IPR012336 Thioredoxin-like fold RD05_RS09645 IPR001486 Globin, truncated bacterial-like RD05_RS09645 IPR009050 Globin-like RD05_RS09645 IPR012292 Globin, structural domain RD05_RS09650 IPR010266 NnrS RD05_RS09655 IPR007418 Protein of unknown function DUF474 RD05_RS09660 IPR004808 AP endonuclease 1 RD05_RS09660 IPR005135 Endonuclease/exonuclease/phosphatase RD05_RS09660 IPR020848 AP endonuclease 1, conserved site RD05_RS09665 IPR009197 Microcystin LR degradation protein MlrC RD05_RS09665 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD05_RS09665 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD05_RS09675 IPR002347 Glucose/ribitol dehydrogenase RD05_RS09675 IPR016040 NAD(P)-binding domain RD05_RS09675 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS09680 IPR000120 Amidase RD05_RS09680 IPR023631 Amidase signature domain RD05_RS09685 IPR000120 Amidase RD05_RS09685 IPR023631 Amidase signature domain RD05_RS09690 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS09690 IPR029058 Alpha/Beta hydrolase fold RD05_RS09695 IPR002509 Polysaccharide deacetylase RD05_RS09695 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS09700 IPR005064 Bordetella uptake gene RD05_RS09710 IPR001584 Integrase, catalytic core RD05_RS09710 IPR009057 Homeodomain-like RD05_RS09710 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09710 IPR012337 Ribonuclease H-like domain RD05_RS09710 IPR024967 DNA-binding domain, IS481-type RD05_RS09715 IPR001584 Integrase, catalytic core RD05_RS09715 IPR009057 Homeodomain-like RD05_RS09715 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09715 IPR012337 Ribonuclease H-like domain RD05_RS09715 IPR024967 DNA-binding domain, IS481-type RD05_RS09725 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS09725 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD05_RS09725 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD05_RS09725 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS09730 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS09730 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS09735 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD05_RS09745 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD05_RS09745 IPR012349 FMN-binding split barrel RD05_RS09750 IPR000847 Transcription regulator HTH, LysR RD05_RS09750 IPR005119 LysR, substrate-binding RD05_RS09750 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09755 IPR021719 Proteinase inhibitor I78 RD05_RS09760 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS09760 IPR002888 [2Fe-2S]-binding RD05_RS09760 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS09760 IPR012675 Beta-grasp domain RD05_RS09765 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD05_RS09765 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD05_RS09765 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RD05_RS09770 IPR003777 XdhC- CoxI RD05_RS09770 IPR016185 Pre-ATP-grasp domain RD05_RS09770 IPR027051 XdhC Rossmann domain RD05_RS09775 IPR009057 Homeodomain-like RD05_RS09775 IPR009594 Transcription regulator HTH, AraC, N-terminal RD05_RS09775 IPR018060 DNA binding HTH domain, AraC-type RD05_RS09785 IPR003111 Peptidase S16, lon N-terminal RD05_RS09785 IPR015947 PUA-like domain RD05_RS09790 IPR028973 3-demethylubiquinone-9 3-methyltransferase RD05_RS09790 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS09795 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD05_RS09795 IPR011701 Major facilitator superfamily RD05_RS09795 IPR020846 Major facilitator superfamily domain RD05_RS09800 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD05_RS09800 IPR011057 Mss4-like RD05_RS09805 IPR001584 Integrase, catalytic core RD05_RS09805 IPR009057 Homeodomain-like RD05_RS09805 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09805 IPR012337 Ribonuclease H-like domain RD05_RS09805 IPR024967 DNA-binding domain, IS481-type RD05_RS09810 IPR000182 GNAT domain RD05_RS09810 IPR016181 Acyl-CoA N-acyltransferase RD05_RS09815 IPR001584 Integrase, catalytic core RD05_RS09815 IPR009057 Homeodomain-like RD05_RS09815 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09815 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09815 IPR012337 Ribonuclease H-like domain RD05_RS09815 IPR024967 DNA-binding domain, IS481-type RD05_RS09820 IPR003439 ABC transporter-like RD05_RS09820 IPR003593 AAA+ ATPase domain RD05_RS09820 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS09820 IPR017871 ABC transporter, conserved site RD05_RS09820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09830 IPR003689 Zinc/iron permease RD05_RS09840 IPR000524 Transcription regulator HTH, GntR RD05_RS09840 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS09840 IPR011711 GntR, C-terminal RD05_RS09840 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09845 IPR001902 Sulphate anion transporter RD05_RS09845 IPR002645 STAS domain RD05_RS09845 IPR011547 Sulphate transporter RD05_RS09850 IPR013538 Activator of Hsp90 ATPase homologue 1-like RD05_RS09850 IPR023393 START-like domain RD05_RS09855 IPR001845 HTH ArsR-type DNA-binding domain RD05_RS09855 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09860 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS09860 IPR029058 Alpha/Beta hydrolase fold RD05_RS09865 IPR005180 Domain of unknown function DUF302 RD05_RS09870 IPR021553 Protein of unknwon function DUF3008 RD05_RS09875 IPR002818 ThiJ/PfpI RD05_RS09875 IPR009057 Homeodomain-like RD05_RS09875 IPR018060 DNA binding HTH domain, AraC-type RD05_RS09875 IPR029062 Class I glutamine amidotransferase-like RD05_RS09880 IPR009874 Protein of unknown function DUF1428 RD05_RS09880 IPR011008 Dimeric alpha-beta barrel RD05_RS09885 IPR003719 Phenazine biosynthesis PhzF protein RD05_RS09890 IPR000847 Transcription regulator HTH, LysR RD05_RS09890 IPR005119 LysR, substrate-binding RD05_RS09890 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09895 IPR007383 Protein of unknown function DUF445 RD05_RS09895 IPR011989 Armadillo-like helical RD05_RS09895 IPR016024 Armadillo-type fold RD05_RS09905 IPR003680 Flavodoxin-like fold RD05_RS09905 IPR029039 Flavoprotein-like RD05_RS09910 IPR015590 Aldehyde dehydrogenase domain RD05_RS09910 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS09910 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS09910 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS09910 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS09910 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS09915 IPR002078 RNA polymerase sigma factor 54 interaction domain RD05_RS09915 IPR002197 DNA binding HTH domain, Fis-type RD05_RS09915 IPR003018 GAF domain RD05_RS09915 IPR003593 AAA+ ATPase domain RD05_RS09915 IPR009057 Homeodomain-like RD05_RS09915 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS09915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09920 IPR001584 Integrase, catalytic core RD05_RS09920 IPR009057 Homeodomain-like RD05_RS09920 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09920 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS09920 IPR012337 Ribonuclease H-like domain RD05_RS09920 IPR024967 DNA-binding domain, IS481-type RD05_RS09925 IPR001584 Integrase, catalytic core RD05_RS09925 IPR009057 Homeodomain-like RD05_RS09925 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09925 IPR012337 Ribonuclease H-like domain RD05_RS09925 IPR024967 DNA-binding domain, IS481-type RD05_RS09930 IPR007300 CidB/LrgB family RD05_RS09935 IPR005538 LrgA/CidA family RD05_RS09940 IPR004472 Dethiobiotin synthase BioD RD05_RS09940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS09940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS09945 IPR029058 Alpha/Beta hydrolase fold RD05_RS09950 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RD05_RS09950 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type RD05_RS09950 IPR004839 Aminotransferase, class I/classII RD05_RS09950 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS09950 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS09950 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS09955 IPR005814 Aminotransferase class-III RD05_RS09955 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RD05_RS09955 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS09955 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS09955 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS09960 IPR001584 Integrase, catalytic core RD05_RS09960 IPR009057 Homeodomain-like RD05_RS09960 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS09960 IPR012337 Ribonuclease H-like domain RD05_RS09960 IPR024967 DNA-binding domain, IS481-type RD05_RS09965 IPR008250 P-type ATPase, A domain RD05_RS09970 IPR004714 Cytochrome oxidase maturation protein cbb3-type RD05_RS09980 IPR000883 Cytochrome c oxidase subunit I RD05_RS09980 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RD05_RS09980 IPR009056 Cytochrome c-like domain RD05_RS09990 IPR004678 Cytochrome c oxidase cbb3-type, subunit III RD05_RS09990 IPR009056 Cytochrome c-like domain RD05_RS09990 IPR032858 RD05_RS09990 RD05_RS09995 IPR013783 Immunoglobulin-like fold RD05_RS09995 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG RD05_RS09995 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS09995 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS09995 IPR032879 RD05_RS09995 RD05_RS10010 IPR002781 Transmembrane protein TauE like RD05_RS10015 IPR016181 Acyl-CoA N-acyltransferase RD05_RS10020 IPR003439 ABC transporter-like RD05_RS10020 IPR003593 AAA+ ATPase domain RD05_RS10020 IPR017871 ABC transporter, conserved site RD05_RS10020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10025 IPR000412 ABC-2 transporter RD05_RS10025 IPR013525 ABC-2 type transporter RD05_RS10030 IPR002549 Uncharacterised protein family UPF0118 RD05_RS10035 IPR001584 Integrase, catalytic core RD05_RS10035 IPR009057 Homeodomain-like RD05_RS10035 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10035 IPR012337 Ribonuclease H-like domain RD05_RS10035 IPR024967 DNA-binding domain, IS481-type RD05_RS10040 IPR001584 Integrase, catalytic core RD05_RS10040 IPR009057 Homeodomain-like RD05_RS10040 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10040 IPR012337 Ribonuclease H-like domain RD05_RS10040 IPR024967 DNA-binding domain, IS481-type RD05_RS10045 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10060 IPR000943 RNA polymerase sigma-70 RD05_RS10060 IPR007127 RNA polymerase sigma factor 70, region 1.1 RD05_RS10060 IPR007624 RNA polymerase sigma-70 region 3 RD05_RS10060 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS10060 IPR007630 RNA polymerase sigma-70 region 4 RD05_RS10060 IPR007631 RNA polymerase sigma factor 70, non-essential domain RD05_RS10060 IPR009042 RNA polymerase sigma-70 region 1.2 RD05_RS10060 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10060 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RD05_RS10060 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS10060 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS10060 IPR014284 RNA polymerase sigma-70 like domain RD05_RS10060 IPR028630 RNA polymerase sigma factor RpoD RD05_RS10065 IPR002694 Zinc finger, CHC2-type RD05_RS10065 IPR006171 Toprim domain RD05_RS10065 IPR006295 DNA primase, DnaG RD05_RS10065 IPR013173 DNA primase DnaG, DnaB-binding domain RD05_RS10065 IPR013264 DNA primase, catalytic core, N-terminal RD05_RS10065 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RD05_RS10065 IPR019475 DNA primase, DnaB-helicase binding domain RD05_RS10065 IPR030846 RD05_RS10065 RD05_RS10070 IPR001911 Ribosomal protein S21 RD05_RS10070 IPR018278 Ribosomal protein S21, conserved site RD05_RS10075 IPR000836 Phosphoribosyltransferase domain RD05_RS10075 IPR029057 Phosphoribosyltransferase-like RD05_RS10080 IPR001114 Adenylosuccinate synthetase RD05_RS10080 IPR018220 Adenylosuccinate synthase, active site RD05_RS10080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10080 IPR033128 RD05_RS10080 RD05_RS10085 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RD05_RS10085 IPR004517 ATP phosphoribosyltransferase regulatory subunit RD05_RS10090 IPR001107 Band 7 protein RD05_RS10090 IPR001972 Stomatin family RD05_RS10090 IPR010200 HflC RD05_RS10095 IPR001107 Band 7 protein RD05_RS10095 IPR001972 Stomatin family RD05_RS10095 IPR010201 HflK RD05_RS10095 IPR020980 Menbrane protein HflK, N-terminal RD05_RS10100 IPR006073 GTP binding domain RD05_RS10100 IPR016496 GTPase HflX RD05_RS10100 IPR025121 GTPase HflX N-terminal domain RD05_RS10100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10100 IPR032305 RD05_RS10100 RD05_RS10105 IPR005001 Host factor Hfq RD05_RS10105 IPR010920 Like-Sm (LSM) domain RD05_RS10110 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RD05_RS10110 IPR004839 Aminotransferase, class I/classII RD05_RS10110 IPR005861 Histidinol-phosphate aminotransferase family RD05_RS10110 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS10110 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS10110 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10115 IPR003593 AAA+ ATPase domain RD05_RS10115 IPR005225 Small GTP-binding protein domain RD05_RS10115 IPR006073 GTP binding domain RD05_RS10115 IPR015946 K homology domain-like, alpha/beta RD05_RS10115 IPR016484 GTP-binding protein EngA RD05_RS10115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10115 IPR032859 RD05_RS10115 RD05_RS10120 IPR002372 Pyrrolo-quinoline quinone repeat RD05_RS10120 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RD05_RS10120 IPR017687 Outer membrane protein assembly factor BamB RD05_RS10120 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RD05_RS10120 IPR027295 Quinonprotein alcohol dehydrogenase-like domain RD05_RS10125 IPR011990 Tetratricopeptide-like helical domain RD05_RS10125 IPR018704 Domain of unknown function DUF09976 RD05_RS10125 IPR026039 Uncharacterised protein family UPF0070 RD05_RS10130 IPR004154 Anticodon-binding RD05_RS10130 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RD05_RS10130 IPR015807 Histidine-tRNA ligase RD05_RS10135 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type RD05_RS10135 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial RD05_RS10140 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10145 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RD05_RS10145 IPR007197 Radical SAM RD05_RS10145 IPR013785 Aldolase-type TIM barrel RD05_RS10145 IPR027492 Dual-specificity RNA methyltransferase RlmN RD05_RS10150 IPR001564 Nucleoside diphosphate kinase RD05_RS10150 IPR023005 Nucleoside diphosphate kinase, active site RD05_RS10155 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS10155 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD05_RS10155 IPR002303 Valine-tRNA ligase RD05_RS10155 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD05_RS10155 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD05_RS10155 IPR010978 tRNA-binding arm RD05_RS10155 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD05_RS10155 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS10155 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RD05_RS10160 IPR010583 MltA-interacting MipA RD05_RS10165 IPR001789 Signal transduction response regulator, receiver domain RD05_RS10165 IPR011006 CheY-like superfamily RD05_RS10170 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS10170 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS10170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS10175 IPR001584 Integrase, catalytic core RD05_RS10175 IPR009057 Homeodomain-like RD05_RS10175 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10175 IPR012337 Ribonuclease H-like domain RD05_RS10175 IPR024967 DNA-binding domain, IS481-type RD05_RS10180 IPR001584 Integrase, catalytic core RD05_RS10180 IPR009057 Homeodomain-like RD05_RS10180 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10180 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10180 IPR012337 Ribonuclease H-like domain RD05_RS10180 IPR024967 DNA-binding domain, IS481-type RD05_RS10185 IPR006175 YjgF/Yer057p/UK114 family RD05_RS10185 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS10190 IPR000192 Aminotransferase class V domain RD05_RS10190 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS10190 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS10190 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10190 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RD05_RS10195 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RD05_RS10195 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RD05_RS10195 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RD05_RS10195 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS10195 IPR029028 Alpha/beta knot methyltransferases RD05_RS10200 IPR002676 RimM protein RD05_RS10200 IPR009000 Translation protein, beta-barrel domain RD05_RS10200 IPR011033 PRC-barrel-like RD05_RS10200 IPR011961 16S rRNA processing protein RimM RD05_RS10205 IPR000307 Ribosomal protein S16 RD05_RS10205 IPR023803 Ribosomal protein S16 domain RD05_RS10215 IPR001455 TusA-like domain RD05_RS10220 IPR002318 Alanine-tRNA ligase, class IIc RD05_RS10220 IPR003156 DHHA1 domain RD05_RS10220 IPR009000 Translation protein, beta-barrel domain RD05_RS10220 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RD05_RS10220 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain RD05_RS10220 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RD05_RS10220 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RD05_RS10220 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RD05_RS10230 IPR012902 Prokaryotic N-terminal methylation site RD05_RS10230 IPR014911 Type 4 secretion system, PilS, N-terminal RD05_RS10240 IPR001482 Type II secretion system protein E RD05_RS10240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10250 IPR009663 Pilin accessory predicted RD05_RS10265 IPR000120 Amidase RD05_RS10265 IPR020556 Amidase, conserved site RD05_RS10265 IPR023631 Amidase signature domain RD05_RS10270 IPR003439 ABC transporter-like RD05_RS10270 IPR003593 AAA+ ATPase domain RD05_RS10270 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS10270 IPR017871 ABC transporter, conserved site RD05_RS10270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10275 IPR000515 MetI-like domain RD05_RS10275 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS10280 IPR000515 MetI-like domain RD05_RS10285 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS10285 IPR030678 RD05_RS10285 RD05_RS10295 IPR010839 Protein of unknown function DUF1446 RD05_RS10300 IPR000847 Transcription regulator HTH, LysR RD05_RS10300 IPR005119 LysR, substrate-binding RD05_RS10300 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10310 IPR006076 FAD dependent oxidoreductase RD05_RS10310 IPR016040 NAD(P)-binding domain RD05_RS10310 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS10315 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS10315 IPR001221 Phenol hydroxylase reductase RD05_RS10315 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS10315 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS10315 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS10315 IPR008333 Oxidoreductase, FAD-binding domain RD05_RS10315 IPR012675 Beta-grasp domain RD05_RS10315 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS10320 IPR003190 Aspartate decarboxylase RD05_RS10320 IPR009010 Aspartate decarboxylase-like domain RD05_RS10325 IPR005302 Molybdenum cofactor sulfurase, C-terminal RD05_RS10325 IPR005303 MOSC, N-terminal beta barrel RD05_RS10325 IPR011037 Pyruvate kinase-like, insert domain RD05_RS10330 IPR000524 Transcription regulator HTH, GntR RD05_RS10330 IPR011663 UbiC transcription regulator-associated RD05_RS10330 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10330 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS10335 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA RD05_RS10335 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS10340 IPR010737 Protein of unknown function, DUF1537 RD05_RS10340 IPR031475 RD05_RS10340 RD05_RS10345 IPR004684 2-keto-3-deoxygluconate permease RD05_RS10350 IPR001584 Integrase, catalytic core RD05_RS10350 IPR009057 Homeodomain-like RD05_RS10350 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10350 IPR012337 Ribonuclease H-like domain RD05_RS10350 IPR024967 DNA-binding domain, IS481-type RD05_RS10355 IPR001584 Integrase, catalytic core RD05_RS10355 IPR009057 Homeodomain-like RD05_RS10355 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10355 IPR012337 Ribonuclease H-like domain RD05_RS10355 IPR024967 DNA-binding domain, IS481-type RD05_RS10360 IPR001753 Crotonase superfamily RD05_RS10360 IPR014748 Crontonase, C-terminal RD05_RS10360 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS10360 IPR029045 ClpP/crotonase-like domain RD05_RS10365 IPR001584 Integrase, catalytic core RD05_RS10365 IPR009057 Homeodomain-like RD05_RS10365 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10365 IPR012337 Ribonuclease H-like domain RD05_RS10365 IPR024967 DNA-binding domain, IS481-type RD05_RS10370 IPR011607 Methylglyoxal synthase-like domain RD05_RS10370 IPR018148 Methylglyoxal synthase, active site RD05_RS10375 IPR007479 ISC system FeS cluster assembly, IscX RD05_RS10380 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS10380 IPR001055 Adrenodoxin RD05_RS10380 IPR011536 Ferredoxin, 2Fe-2S type RD05_RS10380 IPR012675 Beta-grasp domain RD05_RS10380 IPR018298 Adrenodoxin, iron-sulphur binding site RD05_RS10385 IPR010236 ISC system FeS cluster assembly, HscA chaperone RD05_RS10385 IPR013126 Heat shock protein 70 family RD05_RS10385 IPR018181 Heat shock protein 70, conserved site RD05_RS10385 IPR029047 Heat shock protein 70kD, peptide-binding domain RD05_RS10385 IPR029048 Heat shock protein 70kD, C-terminal domain RD05_RS10390 IPR001623 DnaJ domain RD05_RS10390 IPR004640 Co-chaperone Hsc20 RD05_RS10390 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RD05_RS10395 IPR000361 FeS cluster biogenesis RD05_RS10395 IPR011302 ISC system FeS cluster assembly, IscA scaffold RD05_RS10395 IPR016092 FeS cluster insertion protein RD05_RS10395 IPR017870 FeS cluster insertion, C-terminal, conserved site RD05_RS10395 IPR031108 RD05_RS10395 RD05_RS10400 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RD05_RS10400 IPR011339 ISC system FeS cluster assembly, IscU scaffold RD05_RS10405 IPR000192 Aminotransferase class V domain RD05_RS10405 IPR010240 Cysteine desulfurase RD05_RS10405 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS10405 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS10405 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10405 IPR016454 Cysteine desulfurase, NifS RD05_RS10405 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RD05_RS10410 IPR000944 Transcription regulator Rrf2-like RD05_RS10410 IPR010242 Transcription factor HTH, IscR RD05_RS10410 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10415 IPR017867 Protein-tyrosine phosphatase, low molecular weight RD05_RS10415 IPR023485 Phosphotyrosine protein phosphatase I superfamily RD05_RS10420 IPR001650 Helicase, C-terminal RD05_RS10420 IPR001943 UVR domain RD05_RS10420 IPR004807 UvrABC system, subunit B RD05_RS10420 IPR006935 Helicase/UvrB domain RD05_RS10420 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS10420 IPR024759 UvrB, YAD/RRR-motif-containing domain RD05_RS10420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10425 IPR000796 Aspartate/other aminotransferase RD05_RS10425 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD05_RS10425 IPR004839 Aminotransferase, class I/classII RD05_RS10425 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS10425 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10430 IPR006197 Peptidase S24, LexA-like RD05_RS10430 IPR006199 LexA repressor, DNA-binding domain RD05_RS10430 IPR006200 LexA repressor RD05_RS10430 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10430 IPR015927 Peptidase S24/S26A/S26B/S26C RD05_RS10430 IPR019759 Peptidase S24/S26A/S26B RD05_RS10430 IPR028360 Peptidase S24/S26, beta-ribbon domain RD05_RS10435 IPR003991 Pertactin virulence factor family RD05_RS10435 IPR005546 Autotransporter beta-domain RD05_RS10435 IPR006315 Outer membrane autotransporter barrel RD05_RS10445 IPR001584 Integrase, catalytic core RD05_RS10445 IPR009057 Homeodomain-like RD05_RS10445 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10445 IPR012337 Ribonuclease H-like domain RD05_RS10445 IPR024967 DNA-binding domain, IS481-type RD05_RS10450 IPR005064 Bordetella uptake gene RD05_RS10455 IPR005064 Bordetella uptake gene RD05_RS10460 IPR004164 Coenzyme A transferase active site RD05_RS10460 IPR004165 Coenzyme A transferase family I RD05_RS10460 IPR012791 3-oxoacid CoA-transferase, subunit B RD05_RS10465 IPR004165 Coenzyme A transferase family I RD05_RS10465 IPR012792 3-oxoacid CoA-transferase, subunit A RD05_RS10475 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS10475 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS10475 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS10475 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS10480 IPR002347 Glucose/ribitol dehydrogenase RD05_RS10480 IPR016040 NAD(P)-binding domain RD05_RS10480 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS10485 IPR002155 Thiolase RD05_RS10485 IPR016039 Thiolase-like RD05_RS10485 IPR020617 Thiolase, C-terminal RD05_RS10490 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD05_RS10490 IPR012340 Nucleic acid-binding, OB-fold RD05_RS10490 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD05_RS10495 IPR001753 Crotonase superfamily RD05_RS10495 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS10495 IPR029045 ClpP/crotonase-like domain RD05_RS10500 IPR002539 MaoC-like domain RD05_RS10500 IPR029069 HotDog domain RD05_RS10505 IPR005064 Bordetella uptake gene RD05_RS10510 IPR003673 CoA-transferase family III RD05_RS10510 IPR023606 CoA-transferase family III domain RD05_RS10515 IPR000847 Transcription regulator HTH, LysR RD05_RS10515 IPR005119 LysR, substrate-binding RD05_RS10515 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10520 IPR003111 Peptidase S16, lon N-terminal RD05_RS10520 IPR003593 AAA+ ATPase domain RD05_RS10520 IPR003959 ATPase, AAA-type, core RD05_RS10520 IPR004815 Lon protease, bacterial/eukaryotic-type RD05_RS10520 IPR008268 Peptidase S16, active site RD05_RS10520 IPR008269 Peptidase S16, Lon C-terminal RD05_RS10520 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS10520 IPR015947 PUA-like domain RD05_RS10520 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS10520 IPR027065 Lon protease RD05_RS10520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10520 IPR027543 Lon protease, bacterial RD05_RS10525 IPR003593 AAA+ ATPase domain RD05_RS10525 IPR003959 ATPase, AAA-type, core RD05_RS10525 IPR004487 Clp protease, ATP-binding subunit ClpX RD05_RS10525 IPR010603 Zinc finger, ClpX C4-type RD05_RS10525 IPR019489 Clp ATPase, C-terminal RD05_RS10525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10530 IPR001907 ATP-dependent Clp protease proteolytic subunit RD05_RS10530 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RD05_RS10530 IPR029045 ClpP/crotonase-like domain RD05_RS10530 IPR033135 RD05_RS10530 RD05_RS10535 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RD05_RS10535 IPR005215 Trigger factor RD05_RS10535 IPR008880 Trigger factor, C-terminal domain RD05_RS10535 IPR008881 Trigger factor, ribosome-binding, bacterial RD05_RS10535 IPR027304 Trigger factor/SurA domain RD05_RS10540 IPR005134 Uncharacterised protein family UPF0114 RD05_RS10540 IPR020761 Uncharacterised protein family UPF0114, bacteria RD05_RS10540 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria RD05_RS10545 IPR002059 Cold-shock protein, DNA-binding RD05_RS10545 IPR011129 Cold shock protein RD05_RS10545 IPR012156 Cold shock, CspA RD05_RS10545 IPR012340 Nucleic acid-binding, OB-fold RD05_RS10545 IPR019844 Cold-shock conserved site RD05_RS10550 IPR010323 Protein of unknown function DUF924 RD05_RS10550 IPR011990 Tetratricopeptide-like helical domain RD05_RS10555 IPR002059 Cold-shock protein, DNA-binding RD05_RS10555 IPR011129 Cold shock protein RD05_RS10555 IPR012156 Cold shock, CspA RD05_RS10555 IPR012340 Nucleic acid-binding, OB-fold RD05_RS10555 IPR019844 Cold-shock conserved site RD05_RS10570 IPR003991 Pertactin virulence factor family RD05_RS10570 IPR005546 Autotransporter beta-domain RD05_RS10570 IPR006315 Outer membrane autotransporter barrel RD05_RS10575 IPR025421 Protein of unknown function DUF4148 RD05_RS10590 IPR001451 Bacterial transferase hexapeptide repeat RD05_RS10590 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RD05_RS10590 IPR011004 Trimeric LpxA-like RD05_RS10590 IPR018357 Hexapeptide transferase, conserved site RD05_RS10590 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RD05_RS10595 IPR002933 Peptidase M20 RD05_RS10595 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RD05_RS10595 IPR011650 Peptidase M20, dimerisation domain RD05_RS10600 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS10600 IPR004556 Modification methylase HemK RD05_RS10600 IPR007848 Methyltransferase small domain RD05_RS10600 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase RD05_RS10600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS10605 IPR003439 ABC transporter-like RD05_RS10605 IPR003593 AAA+ ATPase domain RD05_RS10605 IPR017871 ABC transporter, conserved site RD05_RS10605 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10605 IPR032781 RD05_RS10605 RD05_RS10610 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS10610 IPR011662 Secretin/TonB, short N-terminal RD05_RS10610 IPR012910 TonB-dependent receptor, plug RD05_RS10615 IPR000212 DNA helicase, UvrD/REP type RD05_RS10615 IPR013986 DExx box DNA helicase domain RD05_RS10615 IPR014016 UvrD-like Helicase, ATP-binding domain RD05_RS10615 IPR014017 DNA helicase, UvrD-like, C-terminal RD05_RS10615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10620 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 RD05_RS10620 IPR005804 Fatty acid desaturase, type 1 RD05_RS10630 IPR001584 Integrase, catalytic core RD05_RS10630 IPR009057 Homeodomain-like RD05_RS10630 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10630 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10630 IPR012337 Ribonuclease H-like domain RD05_RS10630 IPR024967 DNA-binding domain, IS481-type RD05_RS10635 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RD05_RS10635 IPR023267 RNA (C5-cytosine) methyltransferase RD05_RS10635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS10640 IPR002606 Riboflavin kinase, bacterial RD05_RS10640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS10640 IPR015864 FAD synthetase RD05_RS10640 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RD05_RS10640 IPR023465 Riboflavin kinase domain RD05_RS10640 IPR023468 Riboflavin kinase RD05_RS10645 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS10645 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD05_RS10645 IPR002301 Isoleucine-tRNA ligase RD05_RS10645 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD05_RS10645 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD05_RS10645 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RD05_RS10645 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD05_RS10645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS10645 IPR023585 Isoleucine-tRNA ligase, type 1 RD05_RS10650 IPR001872 Peptidase A8, signal peptidase II RD05_RS10655 IPR003382 Flavoprotein RD05_RS10655 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RD05_RS10655 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RD05_RS10665 IPR000485 AsnC-type HTH domain RD05_RS10665 IPR011008 Dimeric alpha-beta barrel RD05_RS10665 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10665 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS10665 IPR019888 Transcription regulator AsnC-type RD05_RS10670 IPR001584 Integrase, catalytic core RD05_RS10670 IPR009057 Homeodomain-like RD05_RS10670 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10670 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10670 IPR012337 Ribonuclease H-like domain RD05_RS10670 IPR024967 DNA-binding domain, IS481-type RD05_RS10675 IPR009282 Protein of unknown function DUF937 RD05_RS10675 IPR027405 YidB-like RD05_RS10680 IPR002477 Peptidoglycan binding-like RD05_RS10680 IPR011757 Lytic transglycosylase MltB RD05_RS10680 IPR011970 Lytic murein transglycosylase RD05_RS10680 IPR023346 Lysozyme-like domain RD05_RS10680 IPR031304 RD05_RS10680 RD05_RS10685 IPR007402 Protein of unknown function DUF455 RD05_RS10685 IPR009078 Ferritin-like superfamily RD05_RS10685 IPR011197 Uncharacterised conserved protein UCP012318 RD05_RS10690 IPR007434 Protein of unknown function DUF482 RD05_RS10690 IPR016181 Acyl-CoA N-acyltransferase RD05_RS10695 IPR015005 Domain of unknown function DUF1854 RD05_RS10705 IPR004101 Mur ligase, C-terminal RD05_RS10705 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS10705 IPR011810 Cyanophycin synthetase RD05_RS10705 IPR013221 Mur ligase, central RD05_RS10705 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS10710 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD05_RS10710 IPR004101 Mur ligase, C-terminal RD05_RS10710 IPR011810 Cyanophycin synthetase RD05_RS10710 IPR013221 Mur ligase, central RD05_RS10710 IPR013651 ATP-grasp fold, RimK-type RD05_RS10710 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS10710 IPR018109 Folylpolyglutamate synthetase, conserved site RD05_RS10715 IPR008462 CsbD-like RD05_RS10715 IPR026042 Stress response protein YjbJ RD05_RS10720 IPR009760 Protein of unknown function DUF1328 RD05_RS10725 IPR007055 BON domain RD05_RS10725 IPR014004 Transport-associated and nodulation domain, bacteria RD05_RS10730 IPR001584 Integrase, catalytic core RD05_RS10730 IPR009057 Homeodomain-like RD05_RS10730 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10730 IPR012337 Ribonuclease H-like domain RD05_RS10730 IPR024967 DNA-binding domain, IS481-type RD05_RS10735 IPR001584 Integrase, catalytic core RD05_RS10735 IPR009057 Homeodomain-like RD05_RS10735 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10735 IPR012337 Ribonuclease H-like domain RD05_RS10735 IPR024967 DNA-binding domain, IS481-type RD05_RS10740 IPR003439 ABC transporter-like RD05_RS10740 IPR017871 ABC transporter, conserved site RD05_RS10740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS10745 IPR013830 RD05_RS10745 RD05_RS10750 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD05_RS10750 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RD05_RS10750 IPR027304 Trigger factor/SurA domain RD05_RS10755 IPR004129 Glycerophosphoryl diester phosphodiesterase RD05_RS10755 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain RD05_RS10755 IPR030395 RD05_RS10755 RD05_RS10760 IPR007473 Ribosomal RNA large subunit methyltransferase J RD05_RS10760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS10765 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS10765 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD05_RS10765 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS10770 IPR002109 Glutaredoxin RD05_RS10770 IPR011767 Glutaredoxin active site RD05_RS10770 IPR011906 Glutaredoxin domain RD05_RS10770 IPR012336 Thioredoxin-like fold RD05_RS10770 IPR013740 Redoxin RD05_RS10770 IPR014025 Glutaredoxin subgroup RD05_RS10775 IPR006121 Heavy metal-associated domain, HMA RD05_RS10775 IPR017969 Heavy-metal-associated, conserved site RD05_RS10780 IPR000551 MerR-type HTH domain RD05_RS10780 IPR009061 DNA binding domain, putative RD05_RS10780 IPR011789 Cu(I)-responsive transcriptional regulator RD05_RS10780 IPR015358 Transcription regulator MerR, DNA binding RD05_RS10785 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD RD05_RS10785 IPR010280 (Uracil-5)-methyltransferase family RD05_RS10785 IPR012340 Nucleic acid-binding, OB-fold RD05_RS10785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS10785 IPR030390 RD05_RS10785 RD05_RS10785 IPR030391 RD05_RS10785 RD05_RS10790 IPR010239 Conserved hypothetical protein CHP02001 RD05_RS10800 IPR012337 Ribonuclease H-like domain RD05_RS10800 IPR019288 Predicted 3'-5' exonuclease, PolB-like RD05_RS10805 IPR011055 Duplicated hybrid motif RD05_RS10805 IPR016047 Peptidase M23 RD05_RS10805 IPR018392 LysM domain RD05_RS10810 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RD05_RS10810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS10815 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RD05_RS10815 IPR030048 RD05_RS10815 RD05_RS10820 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY RD05_RS10825 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS10825 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS10830 IPR000905 Gcp-like domain RD05_RS10830 IPR017861 Kae1/YgjD family RD05_RS10830 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RD05_RS10835 IPR006043 Xanthine/uracil/vitamin C permease RD05_RS10835 IPR026033 Purine permease PbuG-like RD05_RS10835 IPR029940 RD05_RS10835 RD05_RS10845 IPR005746 Thioredoxin RD05_RS10845 IPR012336 Thioredoxin-like fold RD05_RS10845 IPR013766 Thioredoxin domain RD05_RS10845 IPR017937 Thioredoxin, conserved site RD05_RS10850 IPR000640 Translation elongation factor EFG, V domain RD05_RS10850 IPR001498 Impact, N-terminal RD05_RS10850 IPR009022 Elongation factor G, III-V domain RD05_RS10850 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RD05_RS10850 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS10850 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RD05_RS10850 IPR023582 Impact family RD05_RS10855 IPR001584 Integrase, catalytic core RD05_RS10855 IPR009057 Homeodomain-like RD05_RS10855 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10855 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10855 IPR012337 Ribonuclease H-like domain RD05_RS10855 IPR024967 DNA-binding domain, IS481-type RD05_RS10860 IPR000182 GNAT domain RD05_RS10860 IPR012772 L-2,4-diaminobutyric acid acetyltransferase RD05_RS10860 IPR016181 Acyl-CoA N-acyltransferase RD05_RS10865 IPR000835 MarR-type HTH domain RD05_RS10865 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10865 IPR023187 Transcriptional regulator MarR-type, conserved site RD05_RS10870 IPR000281 Helix-turn-helix protein RpiR RD05_RS10870 IPR001347 Sugar isomerase (SIS) RD05_RS10870 IPR009057 Homeodomain-like RD05_RS10870 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10875 IPR005814 Aminotransferase class-III RD05_RS10875 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS10875 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS10875 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS10880 IPR011852 TRAP transporter solute receptor, TAXI family RD05_RS10885 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS10885 IPR011853 TRAP transporter, 4TM/12TM fusion protein RD05_RS10885 IPR021814 Protein of unknown function DUF3394 RD05_RS10890 IPR001584 Integrase, catalytic core RD05_RS10890 IPR009057 Homeodomain-like RD05_RS10890 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS10890 IPR012337 Ribonuclease H-like domain RD05_RS10890 IPR024967 DNA-binding domain, IS481-type RD05_RS10900 IPR004899 Pertactin, central region RD05_RS10900 IPR005546 Autotransporter beta-domain RD05_RS10900 IPR006315 Outer membrane autotransporter barrel RD05_RS10900 IPR011050 Pectin lyase fold/virulence factor RD05_RS10900 IPR012332 P22 tailspike C-terminal domain-like RD05_RS10900 IPR013425 Autotransporter-associated beta strand repeat RD05_RS10900 IPR030895 RD05_RS10900 RD05_RS10910 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS10910 IPR025202 Phospholipase D-like domain RD05_RS10910 IPR027379 Cardiolipin synthase N-terminal RD05_RS10915 IPR002645 STAS domain RD05_RS10915 IPR003658 Anti-sigma factor antagonist RD05_RS10920 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS10925 IPR000821 Alanine racemase RD05_RS10925 IPR001608 Alanine racemase, N-terminal RD05_RS10925 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD05_RS10925 IPR011079 Alanine racemase, C-terminal RD05_RS10925 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RD05_RS10925 IPR029066 PLP-binding barrel RD05_RS10930 IPR011701 Major facilitator superfamily RD05_RS10930 IPR020846 Major facilitator superfamily domain RD05_RS10935 IPR001932 Protein phosphatase 2C (PP2C)-like domain RD05_RS10935 IPR003660 HAMP linker domain RD05_RS10935 IPR004010 Cache domain RD05_RS10935 IPR033480 RD05_RS10935 RD05_RS10940 IPR007487 ABC transporter, substrate-binding protein RD05_RS10960 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS10960 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS10960 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS10960 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS10960 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS10960 IPR014284 RNA polymerase sigma-70 like domain RD05_RS10965 IPR003522 Type III secretion system outer membrane pore YscC/HrcC RD05_RS10965 IPR004846 Type II/III secretion system RD05_RS10965 IPR005644 NolW-like RD05_RS10970 IPR010261 Tir chaperone protein (CesT) family RD05_RS10975 IPR006135 Type III secretion system substrate exporter RD05_RS10975 IPR006307 Type III exporter system, secretion apparatus protein BsaZ RD05_RS10975 IPR029025 Type III secretion system substrate exporter, C-terminal RD05_RS10980 IPR002010 Type III secretion system inner membrane R protein RD05_RS10980 IPR006304 Type III secretion protein SpaR/YscT RD05_RS10985 IPR002191 Bacterial export protein family 3 RD05_RS10985 IPR006306 Type III secretion protein HrpO RD05_RS10990 IPR005773 Yop virulence translocation protein R RD05_RS10990 IPR005838 Type III secretion system inner membrane P protein RD05_RS10995 IPR001543 Surface presentation of antigen (SpoA) RD05_RS10995 IPR003283 Type III secretion system outer membrane, SpaO RD05_RS10995 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO RD05_RS11005 IPR009929 Type III secretion sytem,YscO RD05_RS11010 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS11010 IPR003593 AAA+ ATPase domain RD05_RS11010 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD05_RS11010 IPR005714 ATPase, type III secretion system, FliI/YscN RD05_RS11010 IPR013380 ATPase, type III secretion system, H+-transporting RD05_RS11010 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD05_RS11010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11015 IPR010586 Nodulation NolV RD05_RS11015 IPR012842 Type III secretion system HrpE/YscL RD05_RS11015 IPR028987 F-type ATP synthase subunit B-like, membrane domain RD05_RS11020 IPR009510 Type III secretion system, secretion protein K RD05_RS11025 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ RD05_RS11025 IPR006182 Secretory protein YscJ/FliF RD05_RS11030 IPR012670 Type III secretion system, YscI/HrpB RD05_RS11035 IPR011990 Tetratricopeptide-like helical domain RD05_RS11040 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD RD05_RS11040 IPR011990 Tetratricopeptide-like helical domain RD05_RS11045 IPR006972 Secretion system effector C, SseC-like RD05_RS11055 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD RD05_RS11055 IPR011990 Tetratricopeptide-like helical domain RD05_RS11055 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup RD05_RS11070 IPR010812 Hypersensitivity response secretion-like, HrpJ RD05_RS11070 IPR013351 Type III secretion system effector delivery regulator TyeA-related RD05_RS11070 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC RD05_RS11070 IPR015144 Type III secretion system effector delivery regulator TyeA RD05_RS11075 IPR012673 Type III secretion system chaperone SycN RD05_RS11080 IPR012672 Type III secretion system YscX RD05_RS11085 IPR011990 Tetratricopeptide-like helical domain RD05_RS11090 IPR001712 Type III secretion system FHIPEP RD05_RS11090 IPR006302 Type III secretion protein HrcV RD05_RS11090 IPR025505 FHIPEP conserved site RD05_RS11095 IPR012843 Type III secretion system YscD/HrpQ RD05_RS11105 IPR021123 Type III secretion, needle-protein-like RD05_RS11110 IPR010261 Tir chaperone protein (CesT) family RD05_RS11115 IPR001584 Integrase, catalytic core RD05_RS11115 IPR009057 Homeodomain-like RD05_RS11115 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11115 IPR012337 Ribonuclease H-like domain RD05_RS11115 IPR024967 DNA-binding domain, IS481-type RD05_RS11120 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RD05_RS11120 IPR006359 Transcription elongation factor GreA RD05_RS11120 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RD05_RS11120 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RD05_RS11120 IPR023459 Transcription elongation factor GreA/GreB family RD05_RS11120 IPR028624 Transcription elongation factor GreA/GreB RD05_RS11125 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD05_RS11125 IPR003660 HAMP linker domain RD05_RS11125 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS11125 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS11130 IPR006042 Xanthine/uracil permease RD05_RS11130 IPR006043 Xanthine/uracil/vitamin C permease RD05_RS11145 IPR001584 Integrase, catalytic core RD05_RS11145 IPR009057 Homeodomain-like RD05_RS11145 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11145 IPR012337 Ribonuclease H-like domain RD05_RS11145 IPR024967 DNA-binding domain, IS481-type RD05_RS11150 IPR001584 Integrase, catalytic core RD05_RS11150 IPR009057 Homeodomain-like RD05_RS11150 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11150 IPR012337 Ribonuclease H-like domain RD05_RS11150 IPR024967 DNA-binding domain, IS481-type RD05_RS11155 IPR006076 FAD dependent oxidoreductase RD05_RS11155 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS11160 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative RD05_RS11160 IPR026045 Ferric binding protein RD05_RS11165 IPR006323 Phosphonoacetaldehyde hydrolase RD05_RS11165 IPR006439 HAD hydrolase, subfamily IA RD05_RS11165 IPR023198 Phosphoglycolate phosphatase, domain 2 RD05_RS11165 IPR023214 HAD-like domain RD05_RS11170 IPR000515 MetI-like domain RD05_RS11170 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative RD05_RS11175 IPR003439 ABC transporter-like RD05_RS11175 IPR003593 AAA+ ATPase domain RD05_RS11175 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS11175 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 RD05_RS11175 IPR017871 ABC transporter, conserved site RD05_RS11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11180 IPR000847 Transcription regulator HTH, LysR RD05_RS11180 IPR005119 LysR, substrate-binding RD05_RS11180 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11180 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type RD05_RS11185 IPR017670 Phosphonate degradation operon associated HDIG domain protein RD05_RS11190 IPR001763 Rhodanese-like domain RD05_RS11200 IPR001915 Peptidase M48 RD05_RS11200 IPR022919 Peptidase M48, protease HtpX, putative RD05_RS11205 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS11205 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD05_RS11205 IPR011032 GroES (chaperonin 10)-like RD05_RS11205 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS11205 IPR013154 Alcohol dehydrogenase GroES-like RD05_RS11205 IPR016040 NAD(P)-binding domain RD05_RS11205 IPR020843 Polyketide synthase, enoylreductase RD05_RS11210 IPR000620 Drug/metabolite transporter RD05_RS11215 IPR000620 Drug/metabolite transporter RD05_RS11220 IPR000835 MarR-type HTH domain RD05_RS11220 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11220 IPR023187 Transcriptional regulator MarR-type, conserved site RD05_RS11235 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD05_RS11235 IPR011701 Major facilitator superfamily RD05_RS11235 IPR020846 Major facilitator superfamily domain RD05_RS11240 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD05_RS11240 IPR011829 Tartrate dehydrogenase RD05_RS11240 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD05_RS11240 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS11245 IPR000524 Transcription regulator HTH, GntR RD05_RS11245 IPR004839 Aminotransferase, class I/classII RD05_RS11245 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11245 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS11245 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS11250 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS11250 IPR030678 RD05_RS11250 RD05_RS11255 IPR000515 MetI-like domain RD05_RS11260 IPR000515 MetI-like domain RD05_RS11260 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS11265 IPR003439 ABC transporter-like RD05_RS11265 IPR003593 AAA+ ATPase domain RD05_RS11265 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS11265 IPR017871 ABC transporter, conserved site RD05_RS11265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11270 IPR001584 Integrase, catalytic core RD05_RS11270 IPR009057 Homeodomain-like RD05_RS11270 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11270 IPR012337 Ribonuclease H-like domain RD05_RS11270 IPR024967 DNA-binding domain, IS481-type RD05_RS11275 IPR004632 4-aminobutyrate aminotransferase, bacterial RD05_RS11275 IPR005814 Aminotransferase class-III RD05_RS11275 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS11275 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS11275 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS11280 IPR011051 RmlC-like cupin domain RD05_RS11280 IPR013096 Cupin 2, conserved barrel RD05_RS11280 IPR014710 RmlC-like jelly roll fold RD05_RS11285 IPR000286 Histone deacetylase superfamily RD05_RS11285 IPR023801 Histone deacetylase domain RD05_RS11290 IPR002933 Peptidase M20 RD05_RS11290 IPR010158 Amidase, hydantoinase/carbamoylase RD05_RS11290 IPR011650 Peptidase M20, dimerisation domain RD05_RS11295 IPR000620 Drug/metabolite transporter RD05_RS11300 IPR015590 Aldehyde dehydrogenase domain RD05_RS11300 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS11300 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS11300 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS11300 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS11300 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS11305 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS11305 IPR016040 NAD(P)-binding domain RD05_RS11310 IPR005814 Aminotransferase class-III RD05_RS11310 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS11310 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS11310 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS11315 IPR001463 Sodium:alanine symporter RD05_RS11320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11320 IPR033186 RD05_RS11320 RD05_RS11325 IPR002876 Transcriptional regulator TACO1-like RD05_RS11325 IPR017856 Integrase, N-terminal zinc-binding domain-like RD05_RS11325 IPR026563 Transcriptional regulator TACO1-like, domain 2 RD05_RS11325 IPR026564 Transcriptional regulator TACO1-like, domain 3 RD05_RS11325 IPR029072 YebC-like RD05_RS11330 IPR000115 Phosphoribosylglycinamide synthetase RD05_RS11330 IPR011054 Rudiment single hybrid motif RD05_RS11330 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS11330 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS11330 IPR016185 Pre-ATP-grasp domain RD05_RS11330 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RD05_RS11330 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD05_RS11330 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RD05_RS11335 IPR001260 Coproporphyrinogen III oxidase, aerobic RD05_RS11335 IPR018375 Coproporphyrinogen III oxidase, conserved site RD05_RS11340 IPR004821 Cytidyltransferase-like domain RD05_RS11340 IPR005248 Probable nicotinate-nucleotide adenylyltransferase RD05_RS11340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS11345 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RD05_RS11350 IPR003742 SPOUT methyltransferase, predicted RD05_RS11350 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS11350 IPR029028 Alpha/beta knot methyltransferases RD05_RS11355 IPR003697 Maf-like protein RD05_RS11355 IPR029001 Inosine triphosphate pyrophosphatase-like RD05_RS11360 IPR003991 Pertactin virulence factor family RD05_RS11360 IPR004899 Pertactin, central region RD05_RS11360 IPR005546 Autotransporter beta-domain RD05_RS11360 IPR006315 Outer membrane autotransporter barrel RD05_RS11360 IPR011050 Pectin lyase fold/virulence factor RD05_RS11360 IPR012332 P22 tailspike C-terminal domain-like RD05_RS11395 IPR001584 Integrase, catalytic core RD05_RS11395 IPR009057 Homeodomain-like RD05_RS11395 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11395 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11395 IPR012337 Ribonuclease H-like domain RD05_RS11395 IPR024967 DNA-binding domain, IS481-type RD05_RS11400 IPR004659 Ribonuclease E/G RD05_RS11400 IPR012340 Nucleic acid-binding, OB-fold RD05_RS11400 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RD05_RS11400 IPR022967 RNA-binding domain, S1 RD05_RS11405 IPR001086 Prephenate dehydratase RD05_RS11405 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RD05_RS11410 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS11410 IPR009057 Homeodomain-like RD05_RS11410 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS11415 IPR011701 Major facilitator superfamily RD05_RS11415 IPR020846 Major facilitator superfamily domain RD05_RS11420 IPR003439 ABC transporter-like RD05_RS11420 IPR003593 AAA+ ATPase domain RD05_RS11420 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS11420 IPR011917 ABC transporter, lipid A export, MsbA RD05_RS11420 IPR017871 ABC transporter, conserved site RD05_RS11420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11425 IPR002201 Glycosyl transferase, family 9 RD05_RS11430 IPR003848 Domain of unknown function DUF218 RD05_RS11430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS11435 IPR005358 Putative zinc- or iron-chelating domain containing protein RD05_RS11440 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS11445 IPR002509 Polysaccharide deacetylase RD05_RS11445 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS11450 IPR000917 Sulfatase RD05_RS11450 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD05_RS11450 IPR017850 Alkaline-phosphatase-like, core domain RD05_RS11455 IPR001296 Glycosyl transferase, family 1 RD05_RS11455 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS11460 IPR001173 Glycosyltransferase 2-like RD05_RS11460 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS11465 IPR002509 Polysaccharide deacetylase RD05_RS11465 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS11470 IPR001296 Glycosyl transferase, family 1 RD05_RS11470 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS11475 IPR003141 Polymerase/histidinol phosphatase, N-terminal RD05_RS11475 IPR004013 PHP, C-terminal RD05_RS11475 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD05_RS11475 IPR004805 DNA polymerase III, alpha subunit RD05_RS11475 IPR011708 Bacterial DNA polymerase III, alpha subunit RD05_RS11475 IPR012340 Nucleic acid-binding, OB-fold RD05_RS11475 IPR016195 Polymerase/histidinol phosphatase-like RD05_RS11475 IPR029460 DNA polymerase, helix-hairpin-helix motif RD05_RS11480 IPR007803 Arginine/Asparagine/Proline hydroxylase RD05_RS11480 IPR027443 Isopenicillin N synthase-like RD05_RS11485 IPR001650 Helicase, C-terminal RD05_RS11485 IPR003593 AAA+ ATPase domain RD05_RS11485 IPR007502 Helicase-associated domain RD05_RS11485 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type RD05_RS11485 IPR011709 Domain of unknown function DUF1605 RD05_RS11485 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS11485 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal RD05_RS11485 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11490 IPR000182 GNAT domain RD05_RS11490 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS11490 IPR010167 Amino-acid N-acetyltransferase (ArgA) RD05_RS11490 IPR016181 Acyl-CoA N-acyltransferase RD05_RS11495 IPR007457 Fe(II) trafficking protein YggX RD05_RS11500 IPR007312 Phosphoesterase RD05_RS11500 IPR008475 Bacterial phospholipase C, C-terminal domain RD05_RS11505 IPR026022 PhoU domain RD05_RS11505 IPR028366 Phosphate transport system protein PhoU RD05_RS11510 IPR004788 Ribose 5-phosphate isomerase, type A RD05_RS11510 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup RD05_RS11515 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS11515 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS11515 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS11515 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS11520 IPR003798 DNA recombination RmuC RD05_RS11525 IPR019647 PhoP regulatory network protein YrbL RD05_RS11530 IPR003180 Methylpurine-DNA glycosylase (MPG) RD05_RS11530 IPR011034 Formyl transferase, C-terminal-like RD05_RS11535 IPR006504 Transcriptional regulator Spx/MgsR RD05_RS11535 IPR006660 Arsenate reductase-like RD05_RS11535 IPR012336 Thioredoxin-like fold RD05_RS11540 IPR000515 MetI-like domain RD05_RS11545 IPR000515 MetI-like domain RD05_RS11550 IPR003439 ABC transporter-like RD05_RS11550 IPR003593 AAA+ ATPase domain RD05_RS11550 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit RD05_RS11550 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS11550 IPR013611 Transport-associated OB, type 2 RD05_RS11550 IPR017871 ABC transporter, conserved site RD05_RS11550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11555 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RD05_RS11560 IPR010440 Lipopolysaccharide kinase RD05_RS11560 IPR011009 Protein kinase-like domain RD05_RS11560 IPR022826 3-deoxy-D-manno-octulosonic acid kinase RD05_RS11565 IPR001486 Globin, truncated bacterial-like RD05_RS11565 IPR009050 Globin-like RD05_RS11565 IPR012292 Globin, structural domain RD05_RS11565 IPR019795 Globin, bacterial-like, conserved site RD05_RS11570 IPR003838 Permease FtsX-like RD05_RS11575 IPR004682 TRAP dicarboxylate transporter RD05_RS11575 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS11580 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS11585 IPR004681 TRAP transporter permease protein RD05_RS11585 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS11590 IPR001584 Integrase, catalytic core RD05_RS11590 IPR009057 Homeodomain-like RD05_RS11590 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11590 IPR012337 Ribonuclease H-like domain RD05_RS11590 IPR024967 DNA-binding domain, IS481-type RD05_RS11605 IPR002020 Citrate synthase-like RD05_RS11605 IPR010953 Citrate synthase, type I RD05_RS11605 IPR016142 Citrate synthase-like, large alpha subdomain RD05_RS11605 IPR016143 Citrate synthase-like, small alpha subdomain RD05_RS11605 IPR019810 Citrate synthase active site RD05_RS11605 IPR024176 Citrate synthase, bacterial-type RD05_RS11610 IPR005631 Flavinator of succinate dehydrogenase RD05_RS11615 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS11615 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RD05_RS11615 IPR009051 Alpha-helical ferredoxin RD05_RS11615 IPR012675 Beta-grasp domain RD05_RS11615 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS11615 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RD05_RS11620 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RD05_RS11620 IPR003953 FAD binding domain RD05_RS11620 IPR011281 Succinate dehydrogenase, flavoprotein subunit RD05_RS11620 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RD05_RS11620 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RD05_RS11620 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS11620 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD05_RS11620 IPR030664 RD05_RS11620 RD05_RS11625 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RD05_RS11625 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RD05_RS11630 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RD05_RS11630 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RD05_RS11635 IPR000524 Transcription regulator HTH, GntR RD05_RS11635 IPR011663 UbiC transcription regulator-associated RD05_RS11635 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11635 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS11640 IPR001236 Lactate/malate dehydrogenase, N-terminal RD05_RS11640 IPR001557 L-lactate/malate dehydrogenase RD05_RS11640 IPR010945 Malate dehydrogenase, type 2 RD05_RS11640 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RD05_RS11640 IPR016040 NAD(P)-binding domain RD05_RS11640 IPR022383 Lactate/malate dehydrogenase, C-terminal RD05_RS11650 IPR002020 Citrate synthase-like RD05_RS11650 IPR011278 2-methylcitrate synthase/citrate synthase type I RD05_RS11650 IPR016142 Citrate synthase-like, large alpha subdomain RD05_RS11650 IPR016143 Citrate synthase-like, small alpha subdomain RD05_RS11650 IPR019810 Citrate synthase active site RD05_RS11650 IPR024176 Citrate synthase, bacterial-type RD05_RS11655 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD05_RS11655 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD05_RS11655 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent RD05_RS11655 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS11655 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD05_RS11655 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD05_RS11655 IPR015937 Aconitase/isopropylmalate dehydratase RD05_RS11660 IPR007400 PrpF protein RD05_RS11660 IPR012709 PrpF, AcnD-accessory RD05_RS11665 IPR005656 MmgE/PrpD RD05_RS11665 IPR012705 2-methylcitrate dehydratase PrpD RD05_RS11670 IPR005265 Uncharacterised protein family UPF0093 RD05_RS11675 IPR000241 Putative RNA methylase domain RD05_RS11675 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS11675 IPR004114 THUMP RD05_RS11675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS11685 IPR010432 RDD RD05_RS11690 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD05_RS11690 IPR029052 Metallo-dependent phosphatase-like RD05_RS11695 IPR000873 AMP-dependent synthetase/ligase RD05_RS11695 IPR020845 AMP-binding, conserved site RD05_RS11695 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS11700 IPR001451 Bacterial transferase hexapeptide repeat RD05_RS11700 IPR011004 Trimeric LpxA-like RD05_RS11705 IPR000397 Heat shock protein Hsp33 RD05_RS11705 IPR016153 Heat shock protein Hsp33, N-terminal RD05_RS11705 IPR016154 Heat shock protein Hsp33, C-terminal RD05_RS11705 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RD05_RS11715 IPR011051 RmlC-like cupin domain RD05_RS11715 IPR013096 Cupin 2, conserved barrel RD05_RS11715 IPR014710 RmlC-like jelly roll fold RD05_RS11720 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS11720 IPR004675 Alkylhydroperoxidase AhpD core RD05_RS11720 IPR029032 AhpD-like RD05_RS11725 IPR016040 NAD(P)-binding domain RD05_RS11730 IPR001867 Signal transduction response regulator, C-terminal RD05_RS11730 IPR011990 Tetratricopeptide-like helical domain RD05_RS11730 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11730 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS11730 IPR019734 Tetratricopeptide repeat RD05_RS11735 IPR007060 Septum formation initiator FtsL/DivIC RD05_RS11735 IPR023081 Cell division protein FtsB RD05_RS11740 IPR000941 Enolase RD05_RS11740 IPR020809 Enolase, conserved site RD05_RS11740 IPR020810 Enolase, C-terminal RD05_RS11740 IPR020811 Enolase, N-terminal RD05_RS11740 IPR029017 Enolase N-terminal domain-like RD05_RS11740 IPR029065 Enolase C-terminal domain-like RD05_RS11745 IPR010753 Protein of unknown function DUF1330 RD05_RS11745 IPR011008 Dimeric alpha-beta barrel RD05_RS11750 IPR006218 DAHP synthetase I/KDSA RD05_RS11750 IPR006269 3-deoxy-8-phosphooctulonate synthase RD05_RS11750 IPR013785 Aldolase-type TIM barrel RD05_RS11755 IPR004468 CTP synthase RD05_RS11755 IPR017456 CTP synthase, N-terminal RD05_RS11755 IPR017926 Glutamine amidotransferase RD05_RS11755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11755 IPR029062 Class I glutamine amidotransferase-like RD05_RS11760 IPR001584 Integrase, catalytic core RD05_RS11760 IPR009057 Homeodomain-like RD05_RS11760 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11760 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11760 IPR012337 Ribonuclease H-like domain RD05_RS11760 IPR024967 DNA-binding domain, IS481-type RD05_RS11765 IPR000587 Creatinase, N-terminal RD05_RS11765 IPR000994 Peptidase M24, structural domain RD05_RS11765 IPR028980 Creatinase/Aminopeptidase P, N-terminal RD05_RS11765 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RD05_RS11765 IPR032416 RD05_RS11765 RD05_RS11770 IPR007035 Peptidase M55, D-aminopeptidase RD05_RS11770 IPR027476 D-aminopeptidase, N-terminal RD05_RS11775 IPR005321 Peptidase S58, DmpA RD05_RS11775 IPR016117 ArgJ-like domain RD05_RS11780 IPR000515 MetI-like domain RD05_RS11780 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS11785 IPR000515 MetI-like domain RD05_RS11790 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS11790 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site RD05_RS11790 IPR030678 RD05_RS11790 RD05_RS11795 IPR003439 ABC transporter-like RD05_RS11795 IPR003593 AAA+ ATPase domain RD05_RS11795 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS11795 IPR017871 ABC transporter, conserved site RD05_RS11795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11800 IPR000246 Peptidase T2, asparaginase 2 RD05_RS11800 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS11805 IPR000281 Helix-turn-helix protein RpiR RD05_RS11805 IPR001347 Sugar isomerase (SIS) RD05_RS11805 IPR009057 Homeodomain-like RD05_RS11805 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11810 IPR004164 Coenzyme A transferase active site RD05_RS11810 IPR004165 Coenzyme A transferase family I RD05_RS11810 IPR012791 3-oxoacid CoA-transferase, subunit B RD05_RS11820 IPR029069 HotDog domain RD05_RS11825 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase RD05_RS11825 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS11830 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD05_RS11830 IPR016040 NAD(P)-binding domain RD05_RS11835 IPR001128 Cytochrome P450 RD05_RS11840 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD05_RS11840 IPR011008 Dimeric alpha-beta barrel RD05_RS11845 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase RD05_RS11845 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS11845 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS11845 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS11845 IPR023603 Threonine aldolase RD05_RS11850 IPR000620 Drug/metabolite transporter RD05_RS11855 IPR000873 AMP-dependent synthetase/ligase RD05_RS11855 IPR011904 Acetate-CoA ligase RD05_RS11855 IPR020845 AMP-binding, conserved site RD05_RS11855 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS11855 IPR032387 RD05_RS11855 RD05_RS11860 IPR020846 Major facilitator superfamily domain RD05_RS11860 IPR024671 Autophagy-related protein 22-like RD05_RS11865 IPR005624 Domain of unknown function DUF336 RD05_RS11870 IPR000873 AMP-dependent synthetase/ligase RD05_RS11870 IPR012694 Propionate--CoA ligase RD05_RS11870 IPR020845 AMP-binding, conserved site RD05_RS11870 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS11875 IPR000064 Endopeptidase, NLPC/P60 domain RD05_RS11880 IPR016772 Uncharacterised conserved protein UCP020408 RD05_RS11885 IPR001584 Integrase, catalytic core RD05_RS11885 IPR009057 Homeodomain-like RD05_RS11885 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11885 IPR012337 Ribonuclease H-like domain RD05_RS11885 IPR024967 DNA-binding domain, IS481-type RD05_RS11890 IPR000847 Transcription regulator HTH, LysR RD05_RS11890 IPR005119 LysR, substrate-binding RD05_RS11890 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11895 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD05_RS11895 IPR015590 Aldehyde dehydrogenase domain RD05_RS11895 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS11895 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS11895 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS11895 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS11900 IPR028081 Leucine-binding protein domain RD05_RS11900 IPR028082 Periplasmic binding protein-like I RD05_RS11905 IPR000847 Transcription regulator HTH, LysR RD05_RS11905 IPR005119 LysR, substrate-binding RD05_RS11905 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11910 IPR005495 Permease YjgP/YjgQ, predicted RD05_RS11910 IPR030922 RD05_RS11910 RD05_RS11915 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RD05_RS11915 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RD05_RS11915 IPR011356 Leucine aminopeptidase/peptidase B RD05_RS11915 IPR023042 Peptidase M17, leucine aminopeptidase RD05_RS11920 IPR007459 DNA polymerase III chi subunit, HolC RD05_RS11930 IPR006214 Bax inhibitor 1-related RD05_RS11935 IPR005064 Bordetella uptake gene RD05_RS11940 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD05_RS11945 IPR001584 Integrase, catalytic core RD05_RS11945 IPR009057 Homeodomain-like RD05_RS11945 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS11945 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11945 IPR012337 Ribonuclease H-like domain RD05_RS11945 IPR024967 DNA-binding domain, IS481-type RD05_RS11950 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS11955 IPR000847 Transcription regulator HTH, LysR RD05_RS11955 IPR005119 LysR, substrate-binding RD05_RS11955 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS11960 IPR003717 Recombination protein O, RecO RD05_RS11960 IPR012340 Nucleic acid-binding, OB-fold RD05_RS11960 IPR022572 DNA replication/recombination mediator RecO, N-terminal RD05_RS11965 IPR004044 K Homology domain, type 2 RD05_RS11965 IPR005225 Small GTP-binding protein domain RD05_RS11965 IPR005662 GTP-binding protein Era RD05_RS11965 IPR006073 GTP binding domain RD05_RS11965 IPR009019 K homology domain, prokaryotic type RD05_RS11965 IPR015946 K homology domain-like, alpha/beta RD05_RS11965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11970 IPR000999 Ribonuclease III domain RD05_RS11970 IPR011907 Ribonuclease III RD05_RS11970 IPR014720 Double-stranded RNA-binding domain RD05_RS11975 IPR000223 Peptidase S26A, signal peptidase I RD05_RS11975 IPR015927 Peptidase S24/S26A/S26B/S26C RD05_RS11975 IPR019533 Peptidase S26 RD05_RS11975 IPR019756 Peptidase S26A, signal peptidase I, serine active site RD05_RS11975 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RD05_RS11975 IPR019759 Peptidase S24/S26A/S26B RD05_RS11975 IPR019766 Peptidase S26A, all-beta subdomain RD05_RS11975 IPR028360 Peptidase S24/S26, beta-ribbon domain RD05_RS11980 IPR000640 Translation elongation factor EFG, V domain RD05_RS11980 IPR000795 Elongation factor, GTP-binding domain RD05_RS11980 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD05_RS11980 IPR005225 Small GTP-binding protein domain RD05_RS11980 IPR006297 Elongation factor 4 RD05_RS11980 IPR009000 Translation protein, beta-barrel domain RD05_RS11980 IPR009022 Elongation factor G, III-V domain RD05_RS11980 IPR013842 GTP-binding protein LepA, C-terminal RD05_RS11980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS11980 IPR031157 RD05_RS11980 RD05_RS11985 IPR001478 PDZ domain RD05_RS11985 IPR001940 Peptidase S1C RD05_RS11985 IPR009003 Trypsin-like cysteine/serine peptidase domain RD05_RS11985 IPR011782 Peptidase S1C, Do RD05_RS11990 IPR005588 MucB/RseB RD05_RS11990 IPR033434 RD05_RS11990 RD05_RS11990 IPR033436 RD05_RS11990 RD05_RS11995 IPR005572 Anti sigma-E protein RseA, N-terminal RD05_RS12000 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD05_RS12000 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS12000 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12000 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS12000 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS12000 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS12000 IPR014284 RNA polymerase sigma-70 like domain RD05_RS12000 IPR014286 RNA polymerase sigma-70 RpoE type RD05_RS12010 IPR014030 Beta-ketoacyl synthase, N-terminal RD05_RS12010 IPR014031 Beta-ketoacyl synthase, C-terminal RD05_RS12010 IPR016039 Thiolase-like RD05_RS12010 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RD05_RS12010 IPR018201 Beta-ketoacyl synthase, active site RD05_RS12010 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RD05_RS12015 IPR003231 Acyl carrier protein (ACP) RD05_RS12015 IPR006162 Phosphopantetheine attachment site RD05_RS12015 IPR009081 Acyl carrier protein-like RD05_RS12020 IPR002347 Glucose/ribitol dehydrogenase RD05_RS12020 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD05_RS12020 IPR016040 NAD(P)-binding domain RD05_RS12020 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS12025 IPR001227 Acyl transferase domain RD05_RS12025 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RD05_RS12025 IPR014043 Acyl transferase RD05_RS12025 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD05_RS12025 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RD05_RS12025 IPR020801 Polyketide synthase, acyl transferase domain RD05_RS12025 IPR024925 Malonyl CoA-acyl carrier protein transacylase RD05_RS12030 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RD05_RS12030 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD05_RS12030 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD05_RS12030 IPR016039 Thiolase-like RD05_RS12035 IPR003664 Fatty acid synthesis PlsX protein RD05_RS12035 IPR012281 Phospholipid biosynthesis protein, PlsX-like RD05_RS12035 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS12040 IPR002677 Ribosomal protein L32p RD05_RS12040 IPR011332 Zinc-binding ribosomal protein RD05_RS12045 IPR003772 Protein of unknown function DUF177 RD05_RS12050 IPR003697 Maf-like protein RD05_RS12050 IPR029001 Inosine triphosphate pyrophosphatase-like RD05_RS12055 IPR000878 Tetrapyrrole methylase RD05_RS12055 IPR008189 rRNA small subunit methyltransferase I RD05_RS12055 IPR014776 Tetrapyrrole methylase, subdomain 2 RD05_RS12060 IPR002477 Peptidoglycan binding-like RD05_RS12060 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RD05_RS12065 IPR032692 RD05_RS12065 RD05_RS12070 IPR011701 Major facilitator superfamily RD05_RS12070 IPR020846 Major facilitator superfamily domain RD05_RS12075 IPR005583 Uncharacterised protein family UPF0246 RD05_RS12080 IPR001584 Integrase, catalytic core RD05_RS12080 IPR009057 Homeodomain-like RD05_RS12080 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12080 IPR012337 Ribonuclease H-like domain RD05_RS12080 IPR024967 DNA-binding domain, IS481-type RD05_RS12090 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain RD05_RS12090 IPR011060 Ribulose-phosphate binding barrel RD05_RS12090 IPR013785 Aldolase-type TIM barrel RD05_RS12095 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS12100 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS12105 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS12105 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RD05_RS12105 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD05_RS12110 IPR001406 Pseudouridine synthase I, TruA RD05_RS12110 IPR020094 Pseudouridine synthase I, TruA, N-terminal RD05_RS12110 IPR020095 Pseudouridine synthase I, TruA, C-terminal RD05_RS12110 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RD05_RS12110 IPR020103 Pseudouridine synthase, catalytic domain RD05_RS12115 IPR018392 LysM domain RD05_RS12115 IPR020012 Motility protein FimV, N-terminal RD05_RS12120 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RD05_RS12120 IPR000534 Semialdehyde dehydrogenase, NAD-binding RD05_RS12120 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type RD05_RS12120 IPR012080 Aspartate-semialdehyde dehydrogenase RD05_RS12120 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RD05_RS12120 IPR016040 NAD(P)-binding domain RD05_RS12125 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD05_RS12125 IPR004429 Isopropylmalate dehydrogenase RD05_RS12125 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD05_RS12125 IPR024084 Isopropylmalate dehydrogenase-like domain RD05_RS12130 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD05_RS12130 IPR004431 3-isopropylmalate dehydratase, small subunit RD05_RS12130 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS12130 IPR015937 Aconitase/isopropylmalate dehydratase RD05_RS12135 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD05_RS12135 IPR004430 3-isopropylmalate dehydratase, large subunit RD05_RS12135 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD05_RS12135 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD05_RS12135 IPR015937 Aconitase/isopropylmalate dehydratase RD05_RS12135 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD05_RS12140 IPR024370 PBP domain RD05_RS12145 IPR003439 ABC transporter-like RD05_RS12145 IPR003593 AAA+ ATPase domain RD05_RS12145 IPR017871 ABC transporter, conserved site RD05_RS12145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12150 IPR000515 MetI-like domain RD05_RS12155 IPR000847 Transcription regulator HTH, LysR RD05_RS12155 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12155 IPR024370 PBP domain RD05_RS12165 IPR006471 Formate dehydrogenase, gamma subunit RD05_RS12165 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RD05_RS12165 IPR016174 Di-haem cytochrome, transmembrane RD05_RS12170 IPR012336 Thioredoxin-like fold RD05_RS12180 IPR006656 Molybdopterin oxidoreductase RD05_RS12180 IPR006657 Molydopterin dinucleotide-binding domain RD05_RS12180 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RD05_RS12180 IPR009010 Aspartate decarboxylase-like domain RD05_RS12180 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RD05_RS12185 IPR014177 Formate dehydrogenase, TAT signal-containing RD05_RS12190 IPR020945 DMSO/Nitrate reductase chaperone RD05_RS12195 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS12195 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS12200 IPR021735 Protein of unknown function DUF3306 RD05_RS12205 IPR021736 Protein of unknown function DUF3305 RD05_RS12210 IPR000808 Mrp, conserved site RD05_RS12210 IPR002744 Domain of unknown function DUF59 RD05_RS12210 IPR019591 Mrp/NBP35 ATP-binding protein RD05_RS12210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12215 IPR013482 Molybdenum cofactor guanylyltransferase RD05_RS12215 IPR025877 MobA-like NTP transferase domain RD05_RS12215 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS12220 IPR001453 Molybdopterin binding domain RD05_RS12220 IPR005110 MoeA, N-terminal and linker domain RD05_RS12220 IPR005111 MoeA, C-terminal, domain IV RD05_RS12225 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain RD05_RS12225 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12230 IPR001915 Peptidase M48 RD05_RS12235 IPR000453 Chorismate synthase RD05_RS12235 IPR020541 Chorismate synthase, conserved site RD05_RS12240 IPR001633 EAL domain RD05_RS12240 IPR029787 Nucleotide cyclase RD05_RS12250 IPR001584 Integrase, catalytic core RD05_RS12250 IPR009057 Homeodomain-like RD05_RS12250 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12250 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12250 IPR012337 Ribonuclease H-like domain RD05_RS12250 IPR024967 DNA-binding domain, IS481-type RD05_RS12255 IPR000515 MetI-like domain RD05_RS12260 IPR003439 ABC transporter-like RD05_RS12260 IPR003593 AAA+ ATPase domain RD05_RS12260 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS12260 IPR013611 Transport-associated OB, type 2 RD05_RS12260 IPR017871 ABC transporter, conserved site RD05_RS12260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12265 IPR000847 Transcription regulator HTH, LysR RD05_RS12265 IPR005119 LysR, substrate-binding RD05_RS12265 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12270 IPR013078 Histidine phosphatase superfamily, clade-1 RD05_RS12270 IPR029033 Histidine phosphatase superfamily RD05_RS12280 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS12280 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RD05_RS12280 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RD05_RS12280 IPR006275 Carbamoyl-phosphate synthase, large subunit RD05_RS12280 IPR011607 Methylglyoxal synthase-like domain RD05_RS12280 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS12280 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS12280 IPR016185 Pre-ATP-grasp domain RD05_RS12285 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain RD05_RS12285 IPR006274 Carbamoyl-phosphate synthase, small subunit RD05_RS12285 IPR017926 Glutamine amidotransferase RD05_RS12285 IPR029062 Class I glutamine amidotransferase-like RD05_RS12290 IPR001585 Transaldolase RD05_RS12290 IPR004730 Transaldolase type 1 RD05_RS12290 IPR013785 Aldolase-type TIM barrel RD05_RS12290 IPR018225 Transaldolase, active site RD05_RS12295 IPR001584 Integrase, catalytic core RD05_RS12295 IPR009057 Homeodomain-like RD05_RS12295 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12295 IPR012337 Ribonuclease H-like domain RD05_RS12295 IPR024967 DNA-binding domain, IS481-type RD05_RS12300 IPR001584 Integrase, catalytic core RD05_RS12300 IPR009057 Homeodomain-like RD05_RS12300 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12300 IPR012337 Ribonuclease H-like domain RD05_RS12300 IPR024967 DNA-binding domain, IS481-type RD05_RS12310 IPR003736 Phenylacetic acid degradation-related domain RD05_RS12310 IPR006683 Thioesterase superfamily RD05_RS12310 IPR029069 HotDog domain RD05_RS12315 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD05_RS12315 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS12315 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS12315 IPR011548 3-hydroxyisobutyrate dehydrogenase RD05_RS12315 IPR013328 Dehydrogenase, multihelical RD05_RS12315 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD05_RS12315 IPR016040 NAD(P)-binding domain RD05_RS12315 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD05_RS12320 IPR029045 ClpP/crotonase-like domain RD05_RS12320 IPR032259 RD05_RS12320 RD05_RS12325 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS12325 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS12325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS12325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS12325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS12330 IPR005346 RnfH protein RD05_RS12330 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD05_RS12335 IPR005031 Streptomyces cyclase/dehydrase RD05_RS12335 IPR023393 START-like domain RD05_RS12340 IPR001584 Integrase, catalytic core RD05_RS12340 IPR009057 Homeodomain-like RD05_RS12340 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12340 IPR012337 Ribonuclease H-like domain RD05_RS12340 IPR024967 DNA-binding domain, IS481-type RD05_RS12345 IPR000037 SsrA-binding protein RD05_RS12345 IPR020081 SsrA-binding protein, conserved site RD05_RS12345 IPR023620 Small protein B RD05_RS12350 IPR000160 GGDEF domain RD05_RS12350 IPR029787 Nucleotide cyclase RD05_RS12355 IPR001107 Band 7 protein RD05_RS12355 IPR001972 Stomatin family RD05_RS12355 IPR032435 RD05_RS12355 RD05_RS12360 IPR001584 Integrase, catalytic core RD05_RS12360 IPR009057 Homeodomain-like RD05_RS12360 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12360 IPR012337 Ribonuclease H-like domain RD05_RS12360 IPR024967 DNA-binding domain, IS481-type RD05_RS12365 IPR012340 Nucleic acid-binding, OB-fold RD05_RS12370 IPR017926 Glutamine amidotransferase RD05_RS12370 IPR029062 Class I glutamine amidotransferase-like RD05_RS12375 IPR000121 PEP-utilising enzyme, C-terminal RD05_RS12375 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RD05_RS12375 IPR006319 Phosphoenolpyruvate synthase RD05_RS12375 IPR008279 PEP-utilising enzyme, mobile domain RD05_RS12375 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS12375 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS12375 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS12375 IPR018274 PEP-utilising enzyme, active site RD05_RS12375 IPR023151 PEP-utilising enzyme, conserved site RD05_RS12380 IPR005177 Bifunctional kinase-pyrophosphorylase RD05_RS12380 IPR026530 Phosphoenolpyruvate synthase regulatory protein RD05_RS12385 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD05_RS12385 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS12385 IPR029028 Alpha/beta knot methyltransferases RD05_RS12385 IPR029064 50S ribosomal protein L30e-like RD05_RS12390 IPR001352 Ribonuclease HII/HIII RD05_RS12390 IPR012337 Ribonuclease H-like domain RD05_RS12390 IPR022898 Ribonuclease HII RD05_RS12390 IPR024567 Ribonuclease HII/HIII domain RD05_RS12395 IPR003835 Glycosyl transferase, family 19 RD05_RS12400 IPR001451 Bacterial transferase hexapeptide repeat RD05_RS12400 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RD05_RS12400 IPR011004 Trimeric LpxA-like RD05_RS12400 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal RD05_RS12405 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RD05_RS12405 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RD05_RS12405 IPR029069 HotDog domain RD05_RS12410 IPR001451 Bacterial transferase hexapeptide repeat RD05_RS12410 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RD05_RS12410 IPR011004 Trimeric LpxA-like RD05_RS12410 IPR018357 Hexapeptide transferase, conserved site RD05_RS12410 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RD05_RS12415 IPR005632 Chaperone protein Skp RD05_RS12415 IPR024930 Skp domain RD05_RS12420 IPR000184 Bacterial surface antigen (D15) RD05_RS12420 IPR010827 Surface antigen variable number RD05_RS12420 IPR023707 Outer membrane protein assembly factor BamA RD05_RS12425 IPR001478 PDZ domain RD05_RS12425 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RD05_RS12425 IPR008915 Peptidase M50 RD05_RS12430 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD05_RS12430 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal RD05_RS12430 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal RD05_RS12430 IPR016040 NAD(P)-binding domain RD05_RS12430 IPR026877 DXP reductoisomerase C-terminal domain RD05_RS12435 IPR000374 Phosphatidate cytidylyltransferase RD05_RS12440 IPR001441 Decaprenyl diphosphate synthase-like RD05_RS12440 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RD05_RS12445 IPR002661 Ribosome recycling factor RD05_RS12445 IPR023584 Ribosome recycling factor domain RD05_RS12450 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS12450 IPR011817 Uridylate kinase RD05_RS12450 IPR015963 Uridylate kinase, bacteria RD05_RS12455 IPR001816 Translation elongation factor EFTs/EF1B RD05_RS12455 IPR009060 UBA-like RD05_RS12455 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RD05_RS12455 IPR018101 Translation elongation factor Ts, conserved site RD05_RS12460 IPR001865 Ribosomal protein S2 RD05_RS12460 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RD05_RS12460 IPR018130 Ribosomal protein S2, conserved site RD05_RS12460 IPR023591 Ribosomal protein S2, flavodoxin-like domain RD05_RS12465 IPR000994 Peptidase M24, structural domain RD05_RS12465 IPR001714 Peptidase M24, methionine aminopeptidase RD05_RS12465 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RD05_RS12470 IPR002934 Nucleotidyl transferase domain RD05_RS12470 IPR003607 HD/PDEase domain RD05_RS12470 IPR006674 HD domain RD05_RS12470 IPR010043 Protein-PII uridylyltransferase RD05_RS12470 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RD05_RS12475 IPR002771 Multiple antibiotic resistance (MarC)-related RD05_RS12480 IPR003752 Disulphide bond formation protein DsbB/BdbC RD05_RS12480 IPR023380 Disulphide bond formation protein DsbB-like domain RD05_RS12485 IPR000836 Phosphoribosyltransferase domain RD05_RS12485 IPR005854 Amidophosphoribosyl transferase RD05_RS12485 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS12485 IPR029057 Phosphoribosyltransferase-like RD05_RS12490 IPR003825 Colicin V production, CvpA RD05_RS12495 IPR007730 Sporulation-related domain RD05_RS12500 IPR001645 Folylpolyglutamate synthetase RD05_RS12500 IPR004101 Mur ligase, C-terminal RD05_RS12500 IPR013221 Mur ligase, central RD05_RS12500 IPR018109 Folylpolyglutamate synthetase, conserved site RD05_RS12505 IPR005186 Flagellar protein FlaG protein RD05_RS12510 IPR003481 Flagellar hook-associated protein 2, N-terminal RD05_RS12510 IPR010809 Flagellar hook-associated 2, C-terminal RD05_RS12510 IPR010810 Flagellin hook, IN motif RD05_RS12515 IPR003713 Flagellar protein FliS RD05_RS12520 IPR008622 Flagellar protein FliT RD05_RS12530 IPR021136 Flagellar hook-length control protein-like, C-terminal RD05_RS12535 IPR006135 Type III secretion system substrate exporter RD05_RS12535 IPR029025 Type III secretion system substrate exporter, C-terminal RD05_RS12545 IPR001624 Flagellar hook-basal body complex protein FliE RD05_RS12550 IPR000067 Flagellar M-ring protein FliF RD05_RS12550 IPR006182 Secretory protein YscJ/FliF RD05_RS12550 IPR013556 Flagellar M-ring C-terminal RD05_RS12555 IPR000090 Flagellar motor switch protein FliG RD05_RS12555 IPR011002 Flagellar motor switch protein FliG, alpha-helical RD05_RS12555 IPR023087 RD05_RS12555 RD05_RS12555 IPR028263 Flagellar motor switch protein FliG, N-terminal domain RD05_RS12555 IPR032779 RD05_RS12555 RD05_RS12560 IPR000563 Flagellar assembly protein FliH RD05_RS12560 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RD05_RS12565 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS12565 IPR003593 AAA+ ATPase domain RD05_RS12565 IPR005714 ATPase, type III secretion system, FliI/YscN RD05_RS12565 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD05_RS12565 IPR020005 Flagellar export ATPase FliI, clade 1 RD05_RS12565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12565 IPR032463 RD05_RS12565 RD05_RS12570 IPR012823 Flagellar export FliJ RD05_RS12570 IPR018006 Flagellar FliJ, proteobacteria RD05_RS12575 IPR021136 Flagellar hook-length control protein-like, C-terminal RD05_RS12580 IPR001584 Integrase, catalytic core RD05_RS12580 IPR009057 Homeodomain-like RD05_RS12580 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12580 IPR012337 Ribonuclease H-like domain RD05_RS12580 IPR024967 DNA-binding domain, IS481-type RD05_RS12590 IPR005503 Flagellar basal body-associated protein FliL RD05_RS12595 IPR001543 Surface presentation of antigen (SpoA) RD05_RS12595 IPR001689 Flagellar motor switch protein FliM RD05_RS12595 IPR028976 CheC-like domain RD05_RS12600 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb RD05_RS12600 IPR001543 Surface presentation of antigen (SpoA) RD05_RS12600 IPR012826 Flagellar motor switch FliN RD05_RS12605 IPR022781 Flagellar biosynthesis protein, FliO RD05_RS12610 IPR005837 Flagellar transport protein FliP RD05_RS12610 IPR005838 Type III secretion system inner membrane P protein RD05_RS12615 IPR002191 Bacterial export protein family 3 RD05_RS12615 IPR006305 Flagellar biosynthesis protein FliQ RD05_RS12620 IPR002010 Type III secretion system inner membrane R protein RD05_RS12620 IPR006303 Flagellar biosynthesis protein FliR RD05_RS12625 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS12625 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS12630 IPR000014 PAS domain RD05_RS12630 IPR001610 PAC motif RD05_RS12630 IPR003660 HAMP linker domain RD05_RS12630 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS12630 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS12630 IPR013655 PAS fold-3 RD05_RS12635 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD05_RS12635 IPR003660 HAMP linker domain RD05_RS12635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS12635 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS12640 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD05_RS12640 IPR003660 HAMP linker domain RD05_RS12640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS12640 IPR004090 Chemotaxis methyl-accepting receptor RD05_RS12645 IPR001029 Flagellin, D0/D1 domain RD05_RS12645 IPR013384 Flagellar hook-associated protein 3 RD05_RS12650 IPR002371 Flagellar hook-associated protein, FlgK RD05_RS12650 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12655 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RD05_RS12655 IPR013377 Flagellar rod assembly protein/muramidase FlgJ RD05_RS12655 IPR019301 Flagellar protein FlgJ, N-terminal RD05_RS12660 IPR001782 Flagellar P-ring protein RD05_RS12665 IPR000527 Flagellar L-ring protein RD05_RS12670 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12670 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12670 IPR012834 Flagellar basal-body rod FlgG RD05_RS12670 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD05_RS12675 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12675 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12675 IPR019776 Flagellar basal body rod protein, conserved site RD05_RS12675 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD05_RS12680 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12680 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12680 IPR011491 Flagellar basal body FlaE RD05_RS12680 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD05_RS12685 IPR005648 Flagellar hook capping protein RD05_RS12685 IPR025963 FlgD Tudor-like domain RD05_RS12685 IPR025965 FlgD Ig-like domain RD05_RS12690 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12690 IPR006299 Flagellar basal-body rod protein FlgC RD05_RS12690 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD05_RS12690 IPR019776 Flagellar basal body rod protein, conserved site RD05_RS12695 IPR001444 Flagellar basal body rod protein, N-terminal RD05_RS12695 IPR006300 Flagellar basal-body rod protein FlgB RD05_RS12700 IPR013974 SAF domain RD05_RS12700 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RD05_RS12705 IPR007412 Anti-sigma-28 factor, FlgM RD05_RS12705 IPR031316 RD05_RS12705 RD05_RS12710 IPR007809 FlgN-like domain RD05_RS12715 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD05_RS12715 IPR003593 AAA+ ATPase domain RD05_RS12715 IPR020006 Signal-recognition particle (SRP)-type GTPase RD05_RS12715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12725 IPR006135 Type III secretion system substrate exporter RD05_RS12725 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB RD05_RS12725 IPR029025 Type III secretion system substrate exporter, C-terminal RD05_RS12730 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS12730 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS12735 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS12735 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD05_RS12740 IPR000515 MetI-like domain RD05_RS12740 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS12745 IPR003439 ABC transporter-like RD05_RS12745 IPR003593 AAA+ ATPase domain RD05_RS12745 IPR017871 ABC transporter, conserved site RD05_RS12745 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12745 IPR030679 RD05_RS12745 RD05_RS12750 IPR001584 Integrase, catalytic core RD05_RS12750 IPR009057 Homeodomain-like RD05_RS12750 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12750 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12750 IPR012337 Ribonuclease H-like domain RD05_RS12750 IPR024967 DNA-binding domain, IS481-type RD05_RS12755 IPR003710 Ketopantoate reductase ApbA/PanE RD05_RS12755 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS12755 IPR013328 Dehydrogenase, multihelical RD05_RS12755 IPR013332 Ketopantoate reductase, N-terminal domain RD05_RS12755 IPR013752 Ketopantoate reductase, C-terminal domain RD05_RS12755 IPR016040 NAD(P)-binding domain RD05_RS12760 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD05_RS12760 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RD05_RS12760 IPR029017 Enolase N-terminal domain-like RD05_RS12760 IPR029065 Enolase C-terminal domain-like RD05_RS12765 IPR005064 Bordetella uptake gene RD05_RS12775 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD05_RS12775 IPR004431 3-isopropylmalate dehydratase, small subunit RD05_RS12775 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS12775 IPR015937 Aconitase/isopropylmalate dehydratase RD05_RS12780 IPR000843 Transcription regulator HTH, LacI RD05_RS12780 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12780 IPR028082 Periplasmic binding protein-like I RD05_RS12785 IPR005064 Bordetella uptake gene RD05_RS12790 IPR003673 CoA-transferase family III RD05_RS12790 IPR023606 CoA-transferase family III domain RD05_RS12795 IPR002020 Citrate synthase-like RD05_RS12795 IPR016142 Citrate synthase-like, large alpha subdomain RD05_RS12795 IPR016143 Citrate synthase-like, small alpha subdomain RD05_RS12800 IPR005064 Bordetella uptake gene RD05_RS12805 IPR003781 CoA-binding RD05_RS12805 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS12805 IPR016040 NAD(P)-binding domain RD05_RS12805 IPR016102 Succinyl-CoA synthetase-like RD05_RS12805 IPR032875 RD05_RS12805 RD05_RS12810 IPR000524 Transcription regulator HTH, GntR RD05_RS12810 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS12810 IPR011711 GntR, C-terminal RD05_RS12810 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12815 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD05_RS12815 IPR011206 Citrate lyase beta subunit-like RD05_RS12815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS12820 IPR005025 NADPH-dependent FMN reductase-like RD05_RS12820 IPR029039 Flavoprotein-like RD05_RS12825 IPR000847 Transcription regulator HTH, LysR RD05_RS12825 IPR005119 LysR, substrate-binding RD05_RS12825 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12830 IPR012337 Ribonuclease H-like domain RD05_RS12830 IPR019993 RecB family nuclease, TM0106, putative RD05_RS12830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS12835 IPR003991 Pertactin virulence factor family RD05_RS12835 IPR005546 Autotransporter beta-domain RD05_RS12835 IPR006315 Outer membrane autotransporter barrel RD05_RS12835 IPR011050 Pectin lyase fold/virulence factor RD05_RS12835 IPR012332 P22 tailspike C-terminal domain-like RD05_RS12845 IPR005149 Transcription regulator PadR N-terminal RD05_RS12845 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12850 IPR005135 Endonuclease/exonuclease/phosphatase RD05_RS12855 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS12855 IPR025202 Phospholipase D-like domain RD05_RS12855 IPR030872 RD05_RS12855 RD05_RS12865 IPR001584 Integrase, catalytic core RD05_RS12865 IPR009057 Homeodomain-like RD05_RS12865 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12865 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12865 IPR012337 Ribonuclease H-like domain RD05_RS12865 IPR024967 DNA-binding domain, IS481-type RD05_RS12870 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RD05_RS12875 IPR021519 Protein of unknown function DUF3182 RD05_RS12880 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RD05_RS12880 IPR002471 Peptidase S9, serine active site RD05_RS12880 IPR029058 Alpha/Beta hydrolase fold RD05_RS12890 IPR001584 Integrase, catalytic core RD05_RS12890 IPR009057 Homeodomain-like RD05_RS12890 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS12890 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12890 IPR012337 Ribonuclease H-like domain RD05_RS12890 IPR024967 DNA-binding domain, IS481-type RD05_RS12895 IPR017853 Glycoside hydrolase, superfamily RD05_RS12895 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S RD05_RS12900 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12900 IPR013781 Glycoside hydrolase, catalytic domain RD05_RS12900 IPR015902 Glycoside hydrolase, family 13 RD05_RS12900 IPR017853 Glycoside hydrolase, superfamily RD05_RS12905 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12905 IPR011009 Protein kinase-like domain RD05_RS12905 IPR012810 Trehalose synthase/alpha-amylase, N-terminal RD05_RS12905 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain RD05_RS12905 IPR013780 Glycosyl hydrolase, family 13, all-beta RD05_RS12905 IPR013781 Glycoside hydrolase, catalytic domain RD05_RS12905 IPR015902 Glycoside hydrolase, family 13 RD05_RS12905 IPR017853 Glycoside hydrolase, superfamily RD05_RS12905 IPR032091 RD05_RS12905 RD05_RS12910 IPR004193 Glycoside hydrolase, family 13, N-terminal RD05_RS12910 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12910 IPR006048 Alpha-amylase, C-terminal all beta RD05_RS12910 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB RD05_RS12910 IPR013780 Glycosyl hydrolase, family 13, all-beta RD05_RS12910 IPR013781 Glycoside hydrolase, catalytic domain RD05_RS12910 IPR013783 Immunoglobulin-like fold RD05_RS12910 IPR014756 Immunoglobulin E-set RD05_RS12910 IPR015902 Glycoside hydrolase, family 13 RD05_RS12910 IPR017853 Glycoside hydrolase, superfamily RD05_RS12915 IPR004193 Glycoside hydrolase, family 13, N-terminal RD05_RS12915 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12915 IPR011837 Glycogen debranching enzyme, GlgX type RD05_RS12915 IPR013780 Glycosyl hydrolase, family 13, all-beta RD05_RS12915 IPR013781 Glycoside hydrolase, catalytic domain RD05_RS12915 IPR013783 Immunoglobulin-like fold RD05_RS12915 IPR014756 Immunoglobulin E-set RD05_RS12915 IPR015902 Glycoside hydrolase, family 13 RD05_RS12915 IPR017853 Glycoside hydrolase, superfamily RD05_RS12920 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12920 IPR012768 Malto-oligosyltrehalose trehalohydrolase RD05_RS12920 IPR013781 Glycoside hydrolase, catalytic domain RD05_RS12920 IPR013783 Immunoglobulin-like fold RD05_RS12920 IPR014756 Immunoglobulin E-set RD05_RS12920 IPR015902 Glycoside hydrolase, family 13 RD05_RS12920 IPR017853 Glycoside hydrolase, superfamily RD05_RS12920 IPR022567 Domain of unknown function DUF3459 RD05_RS12930 IPR003385 Glycoside hydrolase, family 77 RD05_RS12930 IPR013781 Glycoside hydrolase, catalytic domain RD05_RS12930 IPR017853 Glycoside hydrolase, superfamily RD05_RS12935 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD05_RS12935 IPR012767 Malto-oligosyltrehalose synthase RD05_RS12935 IPR013781 Glycoside hydrolase, catalytic domain RD05_RS12935 IPR013797 Maltooligosyl trehalose synthase, N-terminal RD05_RS12935 IPR015902 Glycoside hydrolase, family 13 RD05_RS12935 IPR017853 Glycoside hydrolase, superfamily RD05_RS12945 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase RD05_RS12945 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD05_RS12945 IPR023479 Pyridoxal kinase RD05_RS12945 IPR029056 Ribokinase-like RD05_RS12950 IPR001608 Alanine racemase, N-terminal RD05_RS12950 IPR011078 Uncharacterised protein family UPF0001 RD05_RS12950 IPR029066 PLP-binding barrel RD05_RS12955 IPR000524 Transcription regulator HTH, GntR RD05_RS12955 IPR004839 Aminotransferase, class I/classII RD05_RS12955 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS12955 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS12955 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS12955 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS12970 IPR006015 Universal stress protein A RD05_RS12970 IPR006016 UspA RD05_RS12970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS12975 IPR001395 Aldo/keto reductase RD05_RS12975 IPR023210 NADP-dependent oxidoreductase domain RD05_RS12985 IPR001570 Peptidase M4, C-terminal RD05_RS12985 IPR013856 Peptidase M4 domain RD05_RS12985 IPR023612 Peptidase M4 RD05_RS12990 IPR032808 RD05_RS12990 RD05_RS12995 IPR024447 YXWGXW repeat RD05_RS13005 IPR001584 Integrase, catalytic core RD05_RS13005 IPR009057 Homeodomain-like RD05_RS13005 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13005 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13005 IPR012337 Ribonuclease H-like domain RD05_RS13005 IPR024967 DNA-binding domain, IS481-type RD05_RS13010 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS13010 IPR012336 Thioredoxin-like fold RD05_RS13010 IPR024706 Peroxiredoxin, AhpC-type RD05_RS13015 IPR006659 Arsenate reductase RD05_RS13015 IPR006660 Arsenate reductase-like RD05_RS13015 IPR012336 Thioredoxin-like fold RD05_RS13020 IPR003673 CoA-transferase family III RD05_RS13020 IPR023606 CoA-transferase family III domain RD05_RS13025 IPR011990 Tetratricopeptide-like helical domain RD05_RS13030 IPR014917 Protein of unknown function DUF1800 RD05_RS13035 IPR010869 Protein of unknown function DUF1501 RD05_RS13040 IPR000889 Glutathione peroxidase RD05_RS13040 IPR012336 Thioredoxin-like fold RD05_RS13040 IPR029760 Glutathione peroxidase conserved site RD05_RS13045 IPR004045 Glutathione S-transferase, N-terminal RD05_RS13045 IPR004046 Glutathione S-transferase, C-terminal RD05_RS13045 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS13045 IPR012336 Thioredoxin-like fold RD05_RS13050 IPR000182 GNAT domain RD05_RS13050 IPR016181 Acyl-CoA N-acyltransferase RD05_RS13060 IPR004143 Biotin/lipoate A/B protein ligase RD05_RS13065 IPR021729 Domain of unknown function DUF3298 RD05_RS13075 IPR003817 Phosphatidylserine decarboxylase-related RD05_RS13075 IPR033177 RD05_RS13075 RD05_RS13075 IPR033178 RD05_RS13075 RD05_RS13080 IPR000262 FMN-dependent dehydrogenase RD05_RS13080 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD05_RS13080 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD05_RS13080 IPR013785 Aldolase-type TIM barrel RD05_RS13085 IPR004872 Lipoprotein NlpA family RD05_RS13090 IPR014914 RES RD05_RS13095 IPR011979 Conserved hypothetical protein CHP02293 RD05_RS13095 IPR024467 Domain of unknown function DUF2384 RD05_RS13100 IPR006696 Protein of unknown function DUF423 RD05_RS13110 IPR001584 Integrase, catalytic core RD05_RS13110 IPR009057 Homeodomain-like RD05_RS13110 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13110 IPR012337 Ribonuclease H-like domain RD05_RS13110 IPR024967 DNA-binding domain, IS481-type RD05_RS13115 IPR010662 Putative hydrolase RBBP9/YdeN RD05_RS13115 IPR029058 Alpha/Beta hydrolase fold RD05_RS13120 IPR000709 Leu/Ile/Val-binding protein RD05_RS13120 IPR028081 Leucine-binding protein domain RD05_RS13120 IPR028082 Periplasmic binding protein-like I RD05_RS13125 IPR003439 ABC transporter-like RD05_RS13125 IPR003593 AAA+ ATPase domain RD05_RS13125 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS13125 IPR012340 Nucleic acid-binding, OB-fold RD05_RS13125 IPR013611 Transport-associated OB, type 2 RD05_RS13125 IPR017871 ABC transporter, conserved site RD05_RS13125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13130 IPR000515 MetI-like domain RD05_RS13130 IPR030165 RD05_RS13130 RD05_RS13135 IPR000515 MetI-like domain RD05_RS13140 IPR006061 Bacterial extracellular solute-binding family 1, conserved site RD05_RS13145 IPR000304 Pyrroline-5-carboxylate reductase RD05_RS13145 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS13145 IPR016040 NAD(P)-binding domain RD05_RS13145 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RD05_RS13145 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RD05_RS13150 IPR003744 Protein of unknown function DUF165 RD05_RS13155 IPR001584 Integrase, catalytic core RD05_RS13155 IPR009057 Homeodomain-like RD05_RS13155 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13155 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13155 IPR012337 Ribonuclease H-like domain RD05_RS13155 IPR024967 DNA-binding domain, IS481-type RD05_RS13160 IPR000709 Leu/Ile/Val-binding protein RD05_RS13160 IPR028081 Leucine-binding protein domain RD05_RS13160 IPR028082 Periplasmic binding protein-like I RD05_RS13165 IPR001851 ABC transporter, permease RD05_RS13170 IPR001851 ABC transporter, permease RD05_RS13170 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RD05_RS13175 IPR003439 ABC transporter-like RD05_RS13175 IPR003593 AAA+ ATPase domain RD05_RS13175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13175 IPR032823 RD05_RS13175 RD05_RS13180 IPR003439 ABC transporter-like RD05_RS13180 IPR003593 AAA+ ATPase domain RD05_RS13180 IPR017871 ABC transporter, conserved site RD05_RS13180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13180 IPR030660 RD05_RS13180 RD05_RS13185 IPR001920 Asp/Glu racemase RD05_RS13185 IPR015942 Asp/Glu/hydantoin racemase RD05_RS13195 IPR004045 Glutathione S-transferase, N-terminal RD05_RS13195 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS13195 IPR012336 Thioredoxin-like fold RD05_RS13200 IPR000620 Drug/metabolite transporter RD05_RS13205 IPR001584 Integrase, catalytic core RD05_RS13205 IPR009057 Homeodomain-like RD05_RS13205 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13205 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13205 IPR012337 Ribonuclease H-like domain RD05_RS13205 IPR024967 DNA-binding domain, IS481-type RD05_RS13210 IPR007349 Domain of unknown function DUF418 RD05_RS13215 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RD05_RS13215 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RD05_RS13215 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RD05_RS13215 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RD05_RS13215 IPR013760 DNA topoisomerase, type IIA-like domain RD05_RS13215 IPR024946 Arginine repressor C-terminal-like domain RD05_RS13220 IPR025588 YcxB-like protein RD05_RS13225 IPR001241 DNA topoisomerase, type IIA RD05_RS13225 IPR002288 DNA gyrase B subunit, C-terminal RD05_RS13225 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS13225 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RD05_RS13225 IPR006171 Toprim domain RD05_RS13225 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RD05_RS13225 IPR013759 DNA topoisomerase, type IIA, central domain RD05_RS13225 IPR013760 DNA topoisomerase, type IIA-like domain RD05_RS13225 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS13225 IPR018522 DNA topoisomerase, type IIA, conserved site RD05_RS13225 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS13230 IPR005746 Thioredoxin RD05_RS13230 IPR012336 Thioredoxin-like fold RD05_RS13230 IPR013766 Thioredoxin domain RD05_RS13230 IPR017937 Thioredoxin, conserved site RD05_RS13235 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD05_RS13235 IPR003593 AAA+ ATPase domain RD05_RS13235 IPR004665 Transcription termination factor Rho RD05_RS13235 IPR011112 Rho termination factor, N-terminal RD05_RS13235 IPR011113 Rho termination factor, RNA-binding RD05_RS13235 IPR011129 Cold shock protein RD05_RS13235 IPR012340 Nucleic acid-binding, OB-fold RD05_RS13235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13245 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain RD05_RS13245 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RD05_RS13245 IPR023057 Glutamate-ammonia-ligase adenylyltransferase RD05_RS13250 IPR003828 Protein of unknown function DUF208 RD05_RS13255 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form RD05_RS13255 IPR005130 Serine dehydratase-like, alpha subunit RD05_RS13255 IPR005131 Serine dehydratase beta chain RD05_RS13255 IPR029009 Allosteric substrate binding domain RD05_RS13260 IPR003841 Sodium-dependent phosphate transport protein RD05_RS13260 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein RD05_RS13265 IPR002925 Dienelactone hydrolase RD05_RS13265 IPR029058 Alpha/Beta hydrolase fold RD05_RS13270 IPR003689 Zinc/iron permease RD05_RS13275 IPR001098 DNA-directed DNA polymerase, family A, palm domain RD05_RS13275 IPR002298 DNA polymerase A RD05_RS13275 IPR002421 5'-3' exonuclease, N-terminal RD05_RS13275 IPR002562 3'-5' exonuclease domain RD05_RS13275 IPR008918 Helix-hairpin-helix motif, class 2 RD05_RS13275 IPR012337 Ribonuclease H-like domain RD05_RS13275 IPR018320 DNA polymerase 1 RD05_RS13275 IPR019760 DNA-directed DNA polymerase, family A, conserved site RD05_RS13275 IPR020045 5'-3' exonuclease, C-terminal domain RD05_RS13275 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RD05_RS13275 IPR029060 PIN domain-like RD05_RS13280 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RD05_RS13280 IPR031100 RD05_RS13280 RD05_RS13285 IPR008992 Enterotoxin RD05_RS13290 IPR005138 Aerolysin/Pertussis toxin APT RD05_RS13290 IPR008992 Enterotoxin RD05_RS13290 IPR016187 C-type lectin fold RD05_RS13290 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD05_RS13295 IPR000640 Translation elongation factor EFG, V domain RD05_RS13295 IPR000795 Elongation factor, GTP-binding domain RD05_RS13295 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD05_RS13295 IPR005225 Small GTP-binding protein domain RD05_RS13295 IPR006298 GTP-binding protein TypA RD05_RS13295 IPR009000 Translation protein, beta-barrel domain RD05_RS13295 IPR009022 Elongation factor G, III-V domain RD05_RS13295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13295 IPR031157 RD05_RS13295 RD05_RS13300 IPR002501 Pseudouridine synthase II RD05_RS13300 IPR014780 tRNA pseudouridine synthase II, TruB RD05_RS13300 IPR020103 Pseudouridine synthase, catalytic domain RD05_RS13300 IPR032819 RD05_RS13300 RD05_RS13305 IPR000238 Ribosome-binding factor A RD05_RS13305 IPR015946 K homology domain-like, alpha/beta RD05_RS13305 IPR023799 Ribosome-binding factor A domain RD05_RS13310 IPR000178 Translation initiation factor aIF-2, bacterial-like RD05_RS13310 IPR005225 Small GTP-binding protein domain RD05_RS13310 IPR006847 Translation initiation factor IF-2, N-terminal RD05_RS13310 IPR009000 Translation protein, beta-barrel domain RD05_RS13310 IPR009061 DNA binding domain, putative RD05_RS13310 IPR013575 Initiation factor 2 associated domain, bacterial RD05_RS13310 IPR023115 Translation initiation factor IF- 2, domain 3 RD05_RS13310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13315 IPR003029 Ribosomal protein S1, RNA-binding domain RD05_RS13315 IPR009019 K homology domain, prokaryotic type RD05_RS13315 IPR010213 Transcription termination factor NusA RD05_RS13315 IPR010214 Transcription termination factor NusA, C-terminal duplication RD05_RS13315 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RD05_RS13315 IPR012340 Nucleic acid-binding, OB-fold RD05_RS13315 IPR013735 Transcription factor NusA, N-terminal RD05_RS13315 IPR015946 K homology domain-like, alpha/beta RD05_RS13315 IPR022967 RNA-binding domain, S1 RD05_RS13315 IPR025249 KH domain, NusA-like RD05_RS13315 IPR030842 RD05_RS13315 RD05_RS13320 IPR003728 Ribosome maturation factor RimP RD05_RS13320 IPR028989 Ribosome maturation factor RimP, N-terminal RD05_RS13320 IPR028998 Ribosome maturation factor RimP, C-terminal RD05_RS13325 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RD05_RS13325 IPR002942 RNA-binding S4 domain RD05_RS13325 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD05_RS13325 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RD05_RS13325 IPR020103 Pseudouridine synthase, catalytic domain RD05_RS13330 IPR005234 Chromosome segregation/condensation protein ScpB RD05_RS13330 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13340 IPR000847 Transcription regulator HTH, LysR RD05_RS13340 IPR005119 LysR, substrate-binding RD05_RS13340 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13345 IPR000415 Nitroreductase-like RD05_RS13345 IPR029479 Nitroreductase RD05_RS13350 IPR003495 CobW/HypB/UreG domain RD05_RS13350 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RD05_RS13350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13355 IPR011051 RmlC-like cupin domain RD05_RS13355 IPR014710 RmlC-like jelly roll fold RD05_RS13370 IPR004045 Glutathione S-transferase, N-terminal RD05_RS13370 IPR004046 Glutathione S-transferase, C-terminal RD05_RS13370 IPR005955 Maleylacetoacetate isomerase RD05_RS13370 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS13370 IPR012336 Thioredoxin-like fold RD05_RS13375 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RD05_RS13380 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RD05_RS13385 IPR001405 RadC protein RD05_RS13385 IPR010994 RuvA domain 2-like RD05_RS13385 IPR025657 RadC-like JAB domain RD05_RS13390 IPR007325 Kynurenine formamidase RD05_RS13390 IPR017484 Kynurenine formamidase, bacteria RD05_RS13395 IPR004981 Tryptophan 2,3-dioxygenase RD05_RS13395 IPR017485 Tryptophan 2,3-dioxygenase, bacterial RD05_RS13400 IPR002150 Ribosomal protein L31 RD05_RS13400 IPR027493 Ribosomal protein L31 type B RD05_RS13410 IPR002528 Multi antimicrobial extrusion protein RD05_RS13420 IPR002781 Transmembrane protein TauE like RD05_RS13425 IPR003593 AAA+ ATPase domain RD05_RS13425 IPR004504 DNA repair protein RadA RD05_RS13425 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS13425 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13430 IPR002035 von Willebrand factor, type A RD05_RS13430 IPR021908 Protein of unknown function DUF3520 RD05_RS13430 IPR022156 Uncharacterised protein YfbK, N-terminal RD05_RS13435 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS13435 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13435 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS13435 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS13435 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS13435 IPR014284 RNA polymerase sigma-70 like domain RD05_RS13440 IPR001584 Integrase, catalytic core RD05_RS13440 IPR009057 Homeodomain-like RD05_RS13440 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13440 IPR012337 Ribonuclease H-like domain RD05_RS13440 IPR024967 DNA-binding domain, IS481-type RD05_RS13450 IPR002347 Glucose/ribitol dehydrogenase RD05_RS13450 IPR016040 NAD(P)-binding domain RD05_RS13455 IPR000821 Alanine racemase RD05_RS13455 IPR001608 Alanine racemase, N-terminal RD05_RS13455 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD05_RS13455 IPR011079 Alanine racemase, C-terminal RD05_RS13455 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RD05_RS13455 IPR029066 PLP-binding barrel RD05_RS13460 IPR002060 Squalene/phytoene synthase RD05_RS13460 IPR008949 Terpenoid synthase RD05_RS13460 IPR017827 Squalene synthase HpnC RD05_RS13465 IPR002060 Squalene/phytoene synthase RD05_RS13465 IPR008949 Terpenoid synthase RD05_RS13465 IPR017828 Squalene/phytoene synthase HpnD RD05_RS13465 IPR019845 Squalene/phytoene synthase, conserved site RD05_RS13470 IPR002937 Amine oxidase RD05_RS13470 IPR017830 Squalene-associated FAD-dependent desaturase RD05_RS13470 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS13475 IPR003691 Putative fluoride ion transporter CrcB RD05_RS13480 IPR005325 Protein of unknown function DUF308, membrane RD05_RS13485 IPR000412 ABC-2 transporter RD05_RS13485 IPR005981 ABC-2 type transporter, NodJ RD05_RS13485 IPR013525 ABC-2 type transporter RD05_RS13490 IPR003439 ABC transporter-like RD05_RS13490 IPR003593 AAA+ ATPase domain RD05_RS13490 IPR017871 ABC transporter, conserved site RD05_RS13490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13495 IPR032307 RD05_RS13495 RD05_RS13500 IPR014469 Protein of unknown function DUF2271 RD05_RS13505 IPR019613 Protein of unknown function DUF4198 RD05_RS13510 IPR003374 ApbE-like domain RD05_RS13510 IPR024932 Flavin transferase ApbE RD05_RS13515 IPR001094 Flavodoxin RD05_RS13515 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS13515 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS13515 IPR008254 Flavodoxin/nitric oxide synthase RD05_RS13515 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS13515 IPR029039 Flavoprotein-like RD05_RS13520 IPR005064 Bordetella uptake gene RD05_RS13525 IPR011059 Metal-dependent hydrolase, composite domain RD05_RS13525 IPR013108 Amidohydrolase 3 RD05_RS13525 IPR023100 D-aminoacylase, insert domain RD05_RS13525 IPR032466 RD05_RS13525 RD05_RS13530 IPR000847 Transcription regulator HTH, LysR RD05_RS13530 IPR005119 LysR, substrate-binding RD05_RS13530 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13535 IPR019587 Polyketide cyclase/dehydrase RD05_RS13535 IPR023393 START-like domain RD05_RS13540 IPR009215 TIM-barrel domain, IGPS-like RD05_RS13540 IPR013785 Aldolase-type TIM barrel RD05_RS13540 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS13545 IPR008322 Uncharacterised protein family UPF0261 RD05_RS13550 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS13550 IPR009057 Homeodomain-like RD05_RS13550 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS13550 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS13555 IPR003991 Pertactin virulence factor family RD05_RS13555 IPR005546 Autotransporter beta-domain RD05_RS13555 IPR006315 Outer membrane autotransporter barrel RD05_RS13560 IPR003991 Pertactin virulence factor family RD05_RS13560 IPR005546 Autotransporter beta-domain RD05_RS13560 IPR006315 Outer membrane autotransporter barrel RD05_RS13565 IPR001584 Integrase, catalytic core RD05_RS13565 IPR009057 Homeodomain-like RD05_RS13565 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13565 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13565 IPR012337 Ribonuclease H-like domain RD05_RS13565 IPR024967 DNA-binding domain, IS481-type RD05_RS13570 IPR001270 ClpA/B family RD05_RS13570 IPR003593 AAA+ ATPase domain RD05_RS13570 IPR003959 ATPase, AAA-type, core RD05_RS13570 IPR004176 Clp, N-terminal RD05_RS13570 IPR017730 Chaperonin ClpB RD05_RS13570 IPR018368 ClpA/B, conserved site 1 RD05_RS13570 IPR019489 Clp ATPase, C-terminal RD05_RS13570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13570 IPR028299 ClpA/B, conserved site 2 RD05_RS13575 IPR000595 Cyclic nucleotide-binding domain RD05_RS13575 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13575 IPR012318 Helix-turn-helix motif, Crp-type RD05_RS13575 IPR014710 RmlC-like jelly roll fold RD05_RS13575 IPR018335 Transcription regulator HTH, Crp-type, conserved site RD05_RS13575 IPR018490 Cyclic nucleotide-binding-like RD05_RS13580 IPR029058 Alpha/Beta hydrolase fold RD05_RS13585 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS13585 IPR012675 Beta-grasp domain RD05_RS13590 IPR000086 NUDIX hydrolase domain RD05_RS13590 IPR015797 NUDIX hydrolase domain-like RD05_RS13590 IPR020084 NUDIX hydrolase, conserved site RD05_RS13595 IPR024530 Protein of unknown function DUF3820 RD05_RS13605 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS13605 IPR009959 Polyketide cyclase SnoaL-like domain RD05_RS13605 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13605 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS13605 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS13605 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS13605 IPR014284 RNA polymerase sigma-70 like domain RD05_RS13605 IPR032710 RD05_RS13605 RD05_RS13610 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS13610 IPR004675 Alkylhydroperoxidase AhpD core RD05_RS13610 IPR029032 AhpD-like RD05_RS13615 IPR007298 Copper resistance lipoprotein NlpE RD05_RS13620 IPR019180 Oxidoreductase-like, N-terminal RD05_RS13635 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase RD05_RS13640 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD05_RS13640 IPR004839 Aminotransferase, class I/classII RD05_RS13640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS13640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS13640 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS13645 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS13645 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD05_RS13650 IPR000515 MetI-like domain RD05_RS13650 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS13655 IPR000515 MetI-like domain RD05_RS13655 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS13660 IPR003439 ABC transporter-like RD05_RS13660 IPR003593 AAA+ ATPase domain RD05_RS13660 IPR017871 ABC transporter, conserved site RD05_RS13660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13660 IPR030679 RD05_RS13660 RD05_RS13665 IPR000847 Transcription regulator HTH, LysR RD05_RS13665 IPR005119 LysR, substrate-binding RD05_RS13665 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13670 IPR000620 Drug/metabolite transporter RD05_RS13675 IPR001584 Integrase, catalytic core RD05_RS13675 IPR009057 Homeodomain-like RD05_RS13675 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13675 IPR012337 Ribonuclease H-like domain RD05_RS13675 IPR024967 DNA-binding domain, IS481-type RD05_RS13680 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD05_RS13685 IPR005220 Viral OB-fold, YgiW RD05_RS13700 IPR009569 Amino acid synthesis, putative RD05_RS13705 IPR005064 Bordetella uptake gene RD05_RS13710 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS13710 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS13710 IPR013328 Dehydrogenase, multihelical RD05_RS13710 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD05_RS13710 IPR016040 NAD(P)-binding domain RD05_RS13710 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD05_RS13715 IPR000847 Transcription regulator HTH, LysR RD05_RS13715 IPR005119 LysR, substrate-binding RD05_RS13715 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13720 IPR001303 Class II aldolase/adducin N-terminal RD05_RS13725 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RD05_RS13725 IPR027461 LD-carboxypeptidase A, C-terminal domain RD05_RS13725 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RD05_RS13725 IPR029062 Class I glutamine amidotransferase-like RD05_RS13735 IPR001734 Sodium/solute symporter RD05_RS13735 IPR031155 RD05_RS13735 RD05_RS13740 IPR011701 Major facilitator superfamily RD05_RS13740 IPR020846 Major facilitator superfamily domain RD05_RS13745 IPR002347 Glucose/ribitol dehydrogenase RD05_RS13745 IPR016040 NAD(P)-binding domain RD05_RS13750 IPR000847 Transcription regulator HTH, LysR RD05_RS13750 IPR005119 LysR, substrate-binding RD05_RS13750 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13755 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD05_RS13755 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RD05_RS13755 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RD05_RS13755 IPR029017 Enolase N-terminal domain-like RD05_RS13755 IPR029065 Enolase C-terminal domain-like RD05_RS13760 IPR005064 Bordetella uptake gene RD05_RS13765 IPR006680 Amidohydrolase 1 RD05_RS13765 IPR032466 RD05_RS13765 RD05_RS13770 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS13770 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS13775 IPR001584 Integrase, catalytic core RD05_RS13775 IPR009057 Homeodomain-like RD05_RS13775 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13775 IPR012337 Ribonuclease H-like domain RD05_RS13775 IPR024967 DNA-binding domain, IS481-type RD05_RS13780 IPR003719 Phenazine biosynthesis PhzF protein RD05_RS13785 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS13790 IPR004923 Iron permease FTR1/Fip1/EfeU RD05_RS13795 IPR008972 Cupredoxin RD05_RS13795 IPR028096 EfeO-type cupredoxin-like domain RD05_RS13800 IPR018470 Periplasmic metal-binding protein Tp34-type RD05_RS13805 IPR007897 PHB accumulation regulatory RD05_RS13805 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RD05_RS13805 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RD05_RS13810 IPR002347 Glucose/ribitol dehydrogenase RD05_RS13810 IPR011283 Acetoacetyl-CoA reductase RD05_RS13810 IPR016040 NAD(P)-binding domain RD05_RS13810 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS13815 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain RD05_RS13815 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I RD05_RS13815 IPR029058 Alpha/Beta hydrolase fold RD05_RS13820 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RD05_RS13820 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD05_RS13825 IPR002942 RNA-binding S4 domain RD05_RS13825 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD05_RS13825 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RD05_RS13825 IPR006225 Pseudouridine synthase, RluC/RluD RD05_RS13825 IPR020103 Pseudouridine synthase, catalytic domain RD05_RS13830 IPR011990 Tetratricopeptide-like helical domain RD05_RS13830 IPR017689 Outer membrane protein assembly factor BamD RD05_RS13835 IPR006555 ATP-dependent helicase, C-terminal RD05_RS13835 IPR010614 DEAD2 RD05_RS13835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13840 IPR003029 Ribosomal protein S1, RNA-binding domain RD05_RS13840 IPR006641 YqgF/RNase H-like domain RD05_RS13840 IPR010994 RuvA domain 2-like RD05_RS13840 IPR012337 Ribonuclease H-like domain RD05_RS13840 IPR012340 Nucleic acid-binding, OB-fold RD05_RS13840 IPR018974 Tex-like protein, N-terminal RD05_RS13840 IPR022967 RNA-binding domain, S1 RD05_RS13840 IPR023097 Tex RuvX-like domain RD05_RS13840 IPR023319 Tex-like protein, HTH domain RD05_RS13840 IPR023323 Tex-like domain RD05_RS13840 IPR032639 RD05_RS13840 RD05_RS13845 IPR002305 Aminoacyl-tRNA synthetase, class Ic RD05_RS13845 IPR002306 Tryptophan-tRNA ligase RD05_RS13845 IPR010879 Domain of unknown function DUF1508 RD05_RS13845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS13845 IPR024109 Tryptophan-tRNA ligase, bacterial-type RD05_RS13850 IPR010921 Trp repressor/replication initiator RD05_RS13850 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13850 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13850 IPR012337 Ribonuclease H-like domain RD05_RS13850 IPR024967 DNA-binding domain, IS481-type RD05_RS13855 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD05_RS13860 IPR002347 Glucose/ribitol dehydrogenase RD05_RS13860 IPR016040 NAD(P)-binding domain RD05_RS13860 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS13865 IPR005064 Bordetella uptake gene RD05_RS13870 IPR001584 Integrase, catalytic core RD05_RS13870 IPR009057 Homeodomain-like RD05_RS13870 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13870 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13870 IPR012337 Ribonuclease H-like domain RD05_RS13870 IPR024967 DNA-binding domain, IS481-type RD05_RS13875 IPR000847 Transcription regulator HTH, LysR RD05_RS13875 IPR005119 LysR, substrate-binding RD05_RS13875 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13880 IPR002347 Glucose/ribitol dehydrogenase RD05_RS13880 IPR016040 NAD(P)-binding domain RD05_RS13885 IPR005654 ATPase, AFG1-like RD05_RS13885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13890 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS13890 IPR006258 Dihydrolipoamide dehydrogenase RD05_RS13890 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD05_RS13890 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS13895 IPR000089 Biotin/lipoyl attachment RD05_RS13895 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD05_RS13895 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS13895 IPR004167 E3 binding RD05_RS13895 IPR006255 Dihydrolipoamide succinyltransferase RD05_RS13895 IPR011053 Single hybrid motif RD05_RS13895 IPR023213 Chloramphenicol acetyltransferase-like domain RD05_RS13900 IPR001017 Dehydrogenase, E1 component RD05_RS13900 IPR005475 Transketolase-like, pyrimidine-binding domain RD05_RS13900 IPR011603 2-oxoglutarate dehydrogenase E1 component RD05_RS13900 IPR029061 Thiamin diphosphate-binding fold RD05_RS13900 IPR031717 RD05_RS13900 RD05_RS13900 IPR032106 RD05_RS13900 RD05_RS13910 IPR004813 Oligopeptide transporter, OPT superfamily RD05_RS13910 IPR004814 Oligopeptide transporter HI_0561 RD05_RS13915 IPR000485 AsnC-type HTH domain RD05_RS13915 IPR011008 Dimeric alpha-beta barrel RD05_RS13915 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13915 IPR019887 Transcription regulator AsnC-type, C-terminal RD05_RS13915 IPR019888 Transcription regulator AsnC-type RD05_RS13920 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type RD05_RS13920 IPR005474 Transketolase, N-terminal RD05_RS13920 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD05_RS13920 IPR017600 Alpha-ketoglutarate dehydrogenase RD05_RS13920 IPR029061 Thiamin diphosphate-binding fold RD05_RS13920 IPR033247 RD05_RS13920 RD05_RS13925 IPR002505 Phosphate acetyl/butaryl transferase RD05_RS13925 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD05_RS13925 IPR012301 Malic enzyme, N-terminal domain RD05_RS13925 IPR012302 Malic enzyme, NAD-binding RD05_RS13925 IPR016040 NAD(P)-binding domain RD05_RS13930 IPR000259 Fimbrial-type adhesion domain RD05_RS13930 IPR008966 Adhesion domain RD05_RS13935 IPR001584 Integrase, catalytic core RD05_RS13935 IPR009057 Homeodomain-like RD05_RS13935 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13935 IPR012337 Ribonuclease H-like domain RD05_RS13935 IPR024967 DNA-binding domain, IS481-type RD05_RS13940 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RD05_RS13940 IPR006358 Transcription elongation factor GreB RD05_RS13940 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RD05_RS13940 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RD05_RS13940 IPR023459 Transcription elongation factor GreA/GreB family RD05_RS13940 IPR028624 Transcription elongation factor GreA/GreB RD05_RS13945 IPR003141 Polymerase/histidinol phosphatase, N-terminal RD05_RS13945 IPR004013 PHP, C-terminal RD05_RS13945 IPR016195 Polymerase/histidinol phosphatase-like RD05_RS13950 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS13950 IPR029058 Alpha/Beta hydrolase fold RD05_RS13955 IPR001584 Integrase, catalytic core RD05_RS13955 IPR009057 Homeodomain-like RD05_RS13955 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS13955 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS13955 IPR012337 Ribonuclease H-like domain RD05_RS13955 IPR024967 DNA-binding domain, IS481-type RD05_RS13960 IPR004477 ComEC/Rec2-related protein RD05_RS13960 IPR025405 Domain of unknown function DUF4131 RD05_RS13965 IPR024519 Domain of unknown function DUF3442, intimin/invasin RD05_RS13975 IPR005546 Autotransporter beta-domain RD05_RS13975 IPR006315 Outer membrane autotransporter barrel RD05_RS13975 IPR011050 Pectin lyase fold/virulence factor RD05_RS13975 IPR012332 P22 tailspike C-terminal domain-like RD05_RS13980 IPR001130 TatD family RD05_RS13980 IPR018228 Deoxyribonuclease, TatD-related, conserved site RD05_RS13980 IPR032466 RD05_RS13980 RD05_RS13985 IPR003439 ABC transporter-like RD05_RS13985 IPR003593 AAA+ ATPase domain RD05_RS13985 IPR011924 Lipoprotein releasing system, ATP-binding protein RD05_RS13985 IPR017871 ABC transporter, conserved site RD05_RS13985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS13990 IPR003838 Permease FtsX-like RD05_RS13990 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family RD05_RS13990 IPR025857 MacB-like periplasmic core domain RD05_RS14000 IPR001667 DDH domain RD05_RS14000 IPR003156 DHHA1 domain RD05_RS14000 IPR004610 Bacterial RecJ exonuclease RD05_RS14005 IPR000352 Peptide chain release factor class I/class II RD05_RS14005 IPR004374 Peptide chain release factor 2 RD05_RS14005 IPR005139 Peptide chain release factor RD05_RS14005 IPR014720 Double-stranded RNA-binding domain RD05_RS14010 IPR002347 Glucose/ribitol dehydrogenase RD05_RS14010 IPR016040 NAD(P)-binding domain RD05_RS14015 IPR002313 Lysine-tRNA ligase, class II RD05_RS14015 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RD05_RS14015 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD05_RS14015 IPR012340 Nucleic acid-binding, OB-fold RD05_RS14015 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RD05_RS14015 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RD05_RS14025 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS14025 IPR009057 Homeodomain-like RD05_RS14025 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS14025 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS14025 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD05_RS14030 IPR000873 AMP-dependent synthetase/ligase RD05_RS14030 IPR020845 AMP-binding, conserved site RD05_RS14035 IPR003439 ABC transporter-like RD05_RS14035 IPR003593 AAA+ ATPase domain RD05_RS14035 IPR017871 ABC transporter, conserved site RD05_RS14035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14040 IPR028081 Leucine-binding protein domain RD05_RS14040 IPR028082 Periplasmic binding protein-like I RD05_RS14050 IPR001851 ABC transporter, permease RD05_RS14055 IPR003439 ABC transporter-like RD05_RS14055 IPR003593 AAA+ ATPase domain RD05_RS14055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14055 IPR032823 RD05_RS14055 RD05_RS14060 IPR001584 Integrase, catalytic core RD05_RS14060 IPR009057 Homeodomain-like RD05_RS14060 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14060 IPR012337 Ribonuclease H-like domain RD05_RS14060 IPR024967 DNA-binding domain, IS481-type RD05_RS14065 IPR000160 GGDEF domain RD05_RS14065 IPR001633 EAL domain RD05_RS14065 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS14065 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS14065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS14065 IPR029787 Nucleotide cyclase RD05_RS14070 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14070 IPR001867 Signal transduction response regulator, C-terminal RD05_RS14070 IPR011006 CheY-like superfamily RD05_RS14070 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14070 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS14075 IPR003846 Uncharacterised protein family UPF0061 RD05_RS14080 IPR018643 Protein of unknown function DUF2069, membrane RD05_RS14085 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14085 IPR017039 Virulence factor BrkB RD05_RS14085 IPR023679 Uncharacterised protein family UPF0761, bacterial RD05_RS14090 IPR000644 CBS domain RD05_RS14095 IPR001584 Integrase, catalytic core RD05_RS14095 IPR009057 Homeodomain-like RD05_RS14095 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14095 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14095 IPR012337 Ribonuclease H-like domain RD05_RS14095 IPR024967 DNA-binding domain, IS481-type RD05_RS14100 IPR001269 tRNA-dihydrouridine synthase RD05_RS14100 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN RD05_RS14100 IPR013785 Aldolase-type TIM barrel RD05_RS14100 IPR018517 tRNA-dihydrouridine synthase, conserved site RD05_RS14105 IPR002575 Aminoglycoside phosphotransferase RD05_RS14105 IPR005280 Homoserine kinase ThrB RD05_RS14105 IPR011009 Protein kinase-like domain RD05_RS14115 IPR018076 Type II secretion system F domain RD05_RS14120 IPR001584 Integrase, catalytic core RD05_RS14120 IPR009057 Homeodomain-like RD05_RS14120 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14120 IPR012337 Ribonuclease H-like domain RD05_RS14120 IPR024967 DNA-binding domain, IS481-type RD05_RS14125 IPR001890 RNA-binding, CRM domain RD05_RS14130 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RD05_RS14130 IPR015507 Ribosomal RNA large subunit methyltransferase E RD05_RS14130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS14135 IPR000642 Peptidase M41 RD05_RS14135 IPR003593 AAA+ ATPase domain RD05_RS14135 IPR003959 ATPase, AAA-type, core RD05_RS14135 IPR003960 ATPase, AAA-type, conserved site RD05_RS14135 IPR005936 Peptidase, FtsH RD05_RS14135 IPR011546 Peptidase M41, FtsH extracellular RD05_RS14135 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14140 IPR000489 Pterin-binding RD05_RS14140 IPR006390 Dihydropteroate synthase RD05_RS14140 IPR011005 Dihydropteroate synthase-like RD05_RS14145 IPR005841 Alpha-D-phosphohexomutase superfamily RD05_RS14145 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD05_RS14145 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD05_RS14145 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD05_RS14145 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD05_RS14145 IPR006352 Phosphoglucosamine mutase RD05_RS14145 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD05_RS14145 IPR016066 Alpha-D-phosphohexomutase, conserved site RD05_RS14150 IPR016181 Acyl-CoA N-acyltransferase RD05_RS14155 IPR003695 Ppx/GppA phosphatase RD05_RS14155 IPR022371 Exopolyphosphatase RD05_RS14155 IPR030673 RD05_RS14155 RD05_RS14160 IPR003414 Polyphosphate kinase RD05_RS14160 IPR024953 Polyphosphate kinase middle domain RD05_RS14160 IPR025198 Polyphosphate kinase N-terminal domain RD05_RS14160 IPR025200 Polyphosphate kinase C-terminal domain RD05_RS14165 IPR005673 ABC transporter, phosphate-binding protein PstS RD05_RS14165 IPR024370 PBP domain RD05_RS14170 IPR000515 MetI-like domain RD05_RS14170 IPR011864 Phosphate ABC transporter, permease protein PstC RD05_RS14175 IPR000515 MetI-like domain RD05_RS14175 IPR005672 Phosphate transport system permease protein PstA RD05_RS14180 IPR003439 ABC transporter-like RD05_RS14180 IPR003593 AAA+ ATPase domain RD05_RS14180 IPR005670 Phosphate transport system permease protein 1 RD05_RS14180 IPR017871 ABC transporter, conserved site RD05_RS14180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14190 IPR001584 Integrase, catalytic core RD05_RS14190 IPR009057 Homeodomain-like RD05_RS14190 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14190 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14190 IPR012337 Ribonuclease H-like domain RD05_RS14190 IPR024967 DNA-binding domain, IS481-type RD05_RS14195 IPR000468 Barstar (barnase inhibitor) RD05_RS14205 IPR002505 Phosphate acetyl/butaryl transferase RD05_RS14205 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD05_RS14205 IPR012301 Malic enzyme, N-terminal domain RD05_RS14205 IPR012302 Malic enzyme, NAD-binding RD05_RS14205 IPR016040 NAD(P)-binding domain RD05_RS14210 IPR016166 FAD-binding, type 2 RD05_RS14215 IPR004839 Aminotransferase, class I/classII RD05_RS14215 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS14215 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS14215 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS14220 IPR008258 Lytic transglycosylase-like SLT domain RD05_RS14220 IPR023346 Lysozyme-like domain RD05_RS14225 IPR002830 UbiD decarboxylyase family RD05_RS14225 IPR012349 FMN-binding split barrel RD05_RS14225 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RD05_RS14235 IPR009937 Protein of unknown function DUF1469 RD05_RS14240 IPR010279 Protein of unknown function DUF883, ElaB RD05_RS14250 IPR000878 Tetrapyrrole methylase RD05_RS14250 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RD05_RS14250 IPR006366 Uroporphyrin-III C-methyltransferase RD05_RS14250 IPR006367 Sirohaem synthase, N-terminal RD05_RS14250 IPR012409 Sirohaem synthase RD05_RS14250 IPR014776 Tetrapyrrole methylase, subdomain 2 RD05_RS14250 IPR014777 Tetrapyrrole methylase, subdomain 1 RD05_RS14250 IPR016040 NAD(P)-binding domain RD05_RS14250 IPR019478 Sirohaem synthase, dimerisation domain RD05_RS14250 IPR028281 Siroheme synthase, central domain RD05_RS14255 IPR003991 Pertactin virulence factor family RD05_RS14255 IPR003992 Pertactin RD05_RS14255 IPR004899 Pertactin, central region RD05_RS14255 IPR005546 Autotransporter beta-domain RD05_RS14255 IPR006315 Outer membrane autotransporter barrel RD05_RS14255 IPR011050 Pectin lyase fold/virulence factor RD05_RS14255 IPR012332 P22 tailspike C-terminal domain-like RD05_RS14260 IPR001584 Integrase, catalytic core RD05_RS14260 IPR009057 Homeodomain-like RD05_RS14260 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14260 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14260 IPR012337 Ribonuclease H-like domain RD05_RS14260 IPR024967 DNA-binding domain, IS481-type RD05_RS14270 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS14270 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS14275 IPR005765 Uracil phosphoribosyl transferase RD05_RS14275 IPR029057 Phosphoribosyltransferase-like RD05_RS14280 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C RD05_RS14280 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS14285 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RD05_RS14290 IPR002616 tRNA-guanine(15) transglycosylase-like RD05_RS14290 IPR004803 Queuine tRNA-ribosyltransferase RD05_RS14295 IPR003849 Preprotein translocase YajC RD05_RS14300 IPR005791 Protein translocase subunit SecD RD05_RS14300 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD05_RS14300 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD05_RS14300 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD05_RS14300 IPR027398 SecD export protein N-terminal TM domain RD05_RS14305 IPR005665 Protein-export membrane protein SecF, bacterial RD05_RS14305 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD05_RS14305 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD05_RS14305 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD05_RS14310 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS14310 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS14320 IPR002792 TRAM domain RD05_RS14320 IPR005839 Methylthiotransferase RD05_RS14320 IPR006463 tRNA-i(6)A37 modification enzyme MiaB RD05_RS14320 IPR006638 Elongator protein 3/MiaB/NifB RD05_RS14320 IPR007197 Radical SAM RD05_RS14320 IPR013848 Methylthiotransferase, N-terminal RD05_RS14320 IPR020612 Methylthiotransferase, conserved site RD05_RS14320 IPR023404 Radical SAM, alpha/beta horseshoe RD05_RS14320 IPR023970 Methylthiotransferase/radical SAM-type protein RD05_RS14325 IPR003714 PhoH-like protein RD05_RS14325 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14330 IPR002036 Endoribonuclease YbeY RD05_RS14330 IPR020549 Endoribonuclease YbeY, conserved site RD05_RS14330 IPR023091 Metalloprotease catalytic domain, predicted RD05_RS14335 IPR000644 CBS domain RD05_RS14335 IPR005170 Transporter-associated domain RD05_RS14335 IPR016166 FAD-binding, type 2 RD05_RS14335 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS14340 IPR003010 Carbon-nitrogen hydrolase RD05_RS14340 IPR004563 Apolipoprotein N-acyltransferase RD05_RS14345 IPR001395 Aldo/keto reductase RD05_RS14345 IPR023210 NADP-dependent oxidoreductase domain RD05_RS14365 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS14365 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS14370 IPR007439 Chemotaxis phosphatase, CheZ RD05_RS14375 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14375 IPR011006 CheY-like superfamily RD05_RS14380 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RD05_RS14380 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14380 IPR008248 Signal transduction response regulator, chemotaxis, CheB RD05_RS14380 IPR011006 CheY-like superfamily RD05_RS14390 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD05_RS14390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD05_RS14395 IPR002545 CheW-like protein RD05_RS14400 IPR002545 CheW-like protein RD05_RS14400 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS14400 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS14400 IPR004105 Histidine kinase CheA-like, homodimeric domain RD05_RS14400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS14400 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RD05_RS14400 IPR015162 CheY binding RD05_RS14405 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14405 IPR011006 CheY-like superfamily RD05_RS14410 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD05_RS14410 IPR025713 Motility protein B, N-terminal domain RD05_RS14415 IPR000540 Flagellar motor protein MotA, conserved site RD05_RS14415 IPR002898 MotA/TolQ/ExbB proton channel RD05_RS14415 IPR022522 Flagellar motor stator, MotA RD05_RS14420 IPR007944 Flagellar transcriptional activator FlhC RD05_RS14425 IPR023559 Flagellar transcriptional activator FlhD RD05_RS14430 IPR000943 RNA polymerase sigma-70 RD05_RS14430 IPR007624 RNA polymerase sigma-70 region 3 RD05_RS14430 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS14430 IPR007630 RNA polymerase sigma-70 region 4 RD05_RS14430 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14430 IPR012845 RNA polymerase sigma factor, FliA/WhiG RD05_RS14430 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS14430 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS14430 IPR014284 RNA polymerase sigma-70 like domain RD05_RS14430 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RD05_RS14430 IPR028617 RNA polymerase sigma factor FliA RD05_RS14435 IPR001584 Integrase, catalytic core RD05_RS14435 IPR009057 Homeodomain-like RD05_RS14435 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14435 IPR012337 Ribonuclease H-like domain RD05_RS14435 IPR024967 DNA-binding domain, IS481-type RD05_RS14440 IPR004368 Translation initiation factor IF-1 RD05_RS14440 IPR006196 RNA-binding domain, S1, IF1 type RD05_RS14440 IPR012340 Nucleic acid-binding, OB-fold RD05_RS14440 IPR022967 RNA-binding domain, S1 RD05_RS14450 IPR011055 Duplicated hybrid motif RD05_RS14450 IPR016047 Peptidase M23 RD05_RS14460 IPR001453 Molybdopterin binding domain RD05_RS14460 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD05_RS14470 IPR008407 Branched-chain amino acid transport, AzlD RD05_RS14470 IPR011606 Branched-chain amino acid transport, permease RD05_RS14480 IPR001623 DnaJ domain RD05_RS14480 IPR002939 Chaperone DnaJ, C-terminal RD05_RS14480 IPR008971 HSP40/DnaJ peptide-binding RD05_RS14485 IPR000182 GNAT domain RD05_RS14485 IPR016181 Acyl-CoA N-acyltransferase RD05_RS14490 IPR007837 DNA damage-inducible protein DinB RD05_RS14490 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RD05_RS14495 IPR001584 Integrase, catalytic core RD05_RS14495 IPR009057 Homeodomain-like RD05_RS14495 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14495 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14495 IPR012337 Ribonuclease H-like domain RD05_RS14495 IPR024967 DNA-binding domain, IS481-type RD05_RS14500 IPR004045 Glutathione S-transferase, N-terminal RD05_RS14500 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS14500 IPR012336 Thioredoxin-like fold RD05_RS14505 IPR024501 Protein of unknown function DUF3141 RD05_RS14505 IPR029058 Alpha/Beta hydrolase fold RD05_RS14510 IPR002505 Phosphate acetyl/butaryl transferase RD05_RS14510 IPR012147 Phosphate acetyl/butyryltransferase RD05_RS14515 IPR000890 Aliphatic acid kinase, short-chain RD05_RS14515 IPR004372 Acetate/Proprionate kinase RD05_RS14515 IPR023865 Aliphatic acid kinase, short-chain, conserved site RD05_RS14520 IPR002347 Glucose/ribitol dehydrogenase RD05_RS14520 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RD05_RS14520 IPR016040 NAD(P)-binding domain RD05_RS14525 IPR001576 Phosphoglycerate kinase RD05_RS14525 IPR015824 Phosphoglycerate kinase, N-terminal RD05_RS14525 IPR015901 Phosphoglycerate kinase, C-terminal RD05_RS14525 IPR015911 Phosphoglycerate kinase, conserved site RD05_RS14530 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RD05_RS14530 IPR016040 NAD(P)-binding domain RD05_RS14530 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RD05_RS14530 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RD05_RS14530 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RD05_RS14530 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RD05_RS14535 IPR005474 Transketolase, N-terminal RD05_RS14535 IPR005475 Transketolase-like, pyrimidine-binding domain RD05_RS14535 IPR005478 Transketolase, bacterial-like RD05_RS14535 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD05_RS14535 IPR029061 Thiamin diphosphate-binding fold RD05_RS14535 IPR033247 RD05_RS14535 RD05_RS14535 IPR033248 RD05_RS14535 RD05_RS14540 IPR006700 Ribosomal RNA small subunit methyltransferase E RD05_RS14540 IPR015947 PUA-like domain RD05_RS14540 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS14540 IPR029028 Alpha/beta knot methyltransferases RD05_RS14545 IPR001584 Integrase, catalytic core RD05_RS14545 IPR009057 Homeodomain-like RD05_RS14545 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14545 IPR012337 Ribonuclease H-like domain RD05_RS14545 IPR024967 DNA-binding domain, IS481-type RD05_RS14550 IPR001584 Integrase, catalytic core RD05_RS14550 IPR009057 Homeodomain-like RD05_RS14550 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14550 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14550 IPR012337 Ribonuclease H-like domain RD05_RS14550 IPR024967 DNA-binding domain, IS481-type RD05_RS14555 IPR001029 Flagellin, D0/D1 domain RD05_RS14555 IPR001492 Flagellin RD05_RS14560 IPR000089 Biotin/lipoyl attachment RD05_RS14560 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS14560 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD05_RS14560 IPR006258 Dihydrolipoamide dehydrogenase RD05_RS14560 IPR011053 Single hybrid motif RD05_RS14560 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD05_RS14560 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD05_RS14560 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS14565 IPR000089 Biotin/lipoyl attachment RD05_RS14565 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD05_RS14565 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS14565 IPR004167 E3 binding RD05_RS14565 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex RD05_RS14565 IPR011053 Single hybrid motif RD05_RS14565 IPR023213 Chloramphenicol acetyltransferase-like domain RD05_RS14570 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type RD05_RS14570 IPR005474 Transketolase, N-terminal RD05_RS14570 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD05_RS14570 IPR029061 Thiamin diphosphate-binding fold RD05_RS14570 IPR033247 RD05_RS14570 RD05_RS14575 IPR000014 PAS domain RD05_RS14575 IPR001610 PAC motif RD05_RS14575 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS14575 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS14575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS14575 IPR013656 PAS fold-4 RD05_RS14580 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS14580 IPR001789 Signal transduction response regulator, receiver domain RD05_RS14580 IPR011006 CheY-like superfamily RD05_RS14580 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14580 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS14585 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RD05_RS14585 IPR016040 NAD(P)-binding domain RD05_RS14585 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD05_RS14585 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD05_RS14585 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RD05_RS14590 IPR001567 Peptidase M3A/M3B RD05_RS14590 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RD05_RS14590 IPR024079 Metallopeptidase, catalytic domain RD05_RS14590 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RD05_RS14595 IPR003782 Copper chaperone SCO1/SenC RD05_RS14595 IPR012336 Thioredoxin-like fold RD05_RS14600 IPR007341 Transglycosylase-associated protein RD05_RS14605 IPR003423 Outer membrane efflux protein RD05_RS14605 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD05_RS14610 IPR001036 Acriflavin resistance protein RD05_RS14610 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RD05_RS14610 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS14620 IPR000847 Transcription regulator HTH, LysR RD05_RS14620 IPR005119 LysR, substrate-binding RD05_RS14620 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14625 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RD05_RS14625 IPR002942 RNA-binding S4 domain RD05_RS14625 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD05_RS14625 IPR020103 Pseudouridine synthase, catalytic domain RD05_RS14630 IPR007440 Chorismate--pyruvate lyase RD05_RS14630 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS14635 IPR011701 Major facilitator superfamily RD05_RS14635 IPR020846 Major facilitator superfamily domain RD05_RS14640 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS14640 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS14645 IPR001395 Aldo/keto reductase RD05_RS14645 IPR020471 Aldo/keto reductase subgroup RD05_RS14645 IPR023210 NADP-dependent oxidoreductase domain RD05_RS14650 IPR001584 Integrase, catalytic core RD05_RS14650 IPR009057 Homeodomain-like RD05_RS14650 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14650 IPR012337 Ribonuclease H-like domain RD05_RS14650 IPR024967 DNA-binding domain, IS481-type RD05_RS14655 IPR000086 NUDIX hydrolase domain RD05_RS14655 IPR015797 NUDIX hydrolase domain-like RD05_RS14660 IPR001857 Ribosomal protein L19 RD05_RS14660 IPR008991 Translation protein SH3-like domain RD05_RS14660 IPR018257 Ribosomal protein L19, conserved site RD05_RS14665 IPR000620 Drug/metabolite transporter RD05_RS14675 IPR006638 Elongator protein 3/MiaB/NifB RD05_RS14675 IPR007197 Radical SAM RD05_RS14675 IPR013785 Aldolase-type TIM barrel RD05_RS14685 IPR002500 Phosphoadenosine phosphosulphate reductase RD05_RS14685 IPR011784 Sulphate adenylyltransferase, small subunit RD05_RS14685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS14690 IPR002500 Phosphoadenosine phosphosulphate reductase RD05_RS14690 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase RD05_RS14690 IPR011798 Adenosine 5'-phosphosulphate reductase RD05_RS14690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS14695 IPR003439 ABC transporter-like RD05_RS14695 IPR003593 AAA+ ATPase domain RD05_RS14695 IPR005666 Sulphate transport system permease protein 1 RD05_RS14695 IPR008995 Molybdate/tungstate binding, C-terminal RD05_RS14695 IPR017871 ABC transporter, conserved site RD05_RS14695 IPR024765 TOBE-like domain RD05_RS14695 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14700 IPR000515 MetI-like domain RD05_RS14700 IPR005667 Sulphate ABC transporter permease protein 2 RD05_RS14700 IPR011866 Sulphate ABC transporter, permease protein CysW RD05_RS14705 IPR000515 MetI-like domain RD05_RS14705 IPR005667 Sulphate ABC transporter permease protein 2 RD05_RS14705 IPR011865 Sulphate ABC transporter, permease protein CysT RD05_RS14715 IPR000957 Sulphate/thiosulphate-binding, conserved site RD05_RS14715 IPR005669 Thiosulphate/Sulfate-binding protein RD05_RS14720 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS14720 IPR012336 Thioredoxin-like fold RD05_RS14720 IPR019479 Peroxiredoxin, C-terminal RD05_RS14720 IPR024706 Peroxiredoxin, AhpC-type RD05_RS14725 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS14725 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS14725 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS14725 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS14725 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RD05_RS14725 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RD05_RS14730 IPR001308 Electron transfer flavoprotein, alpha subunit RD05_RS14730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS14730 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RD05_RS14730 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RD05_RS14730 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site RD05_RS14730 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS14735 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site RD05_RS14735 IPR012255 Electron transfer flavoprotein, beta subunit RD05_RS14735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS14735 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RD05_RS14740 IPR000286 Histone deacetylase superfamily RD05_RS14740 IPR023801 Histone deacetylase domain RD05_RS14745 IPR011757 Lytic transglycosylase MltB RD05_RS14745 IPR023346 Lysozyme-like domain RD05_RS14745 IPR031304 RD05_RS14745 RD05_RS14750 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RD05_RS14750 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS14750 IPR005856 Cysteine synthase K/M RD05_RS14750 IPR005858 Cysteine synthase B RD05_RS14755 IPR001584 Integrase, catalytic core RD05_RS14755 IPR009057 Homeodomain-like RD05_RS14755 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14755 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14755 IPR012337 Ribonuclease H-like domain RD05_RS14755 IPR024967 DNA-binding domain, IS481-type RD05_RS14760 IPR010994 RuvA domain 2-like RD05_RS14765 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD05_RS14765 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase RD05_RS14765 IPR016040 NAD(P)-binding domain RD05_RS14770 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RD05_RS14770 IPR011611 Carbohydrate kinase PfkB RD05_RS14770 IPR011913 RfaE bifunctional protein, domain I RD05_RS14770 IPR029056 Ribokinase-like RD05_RS14775 IPR011990 Tetratricopeptide-like helical domain RD05_RS14775 IPR030865 RD05_RS14775 RD05_RS14780 IPR010445 Protein of unknown function DUF1049 RD05_RS14785 IPR000119 Histone-like bacterial DNA-binding protein RD05_RS14785 IPR005685 Integration host factor, beta subunit RD05_RS14785 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD05_RS14790 IPR000110 Ribosomal protein S1 RD05_RS14790 IPR003029 Ribosomal protein S1, RNA-binding domain RD05_RS14790 IPR012340 Nucleic acid-binding, OB-fold RD05_RS14790 IPR022967 RNA-binding domain, S1 RD05_RS14795 IPR003136 Cytidylate kinase RD05_RS14795 IPR011994 Cytidylate kinase domain RD05_RS14795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14800 IPR001986 Enolpyruvate transferase domain RD05_RS14800 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RD05_RS14800 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RD05_RS14800 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RD05_RS14805 IPR003099 Prephenate dehydrogenase RD05_RS14805 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS14805 IPR016040 NAD(P)-binding domain RD05_RS14810 IPR001086 Prephenate dehydratase RD05_RS14810 IPR002701 Chorismate mutase RD05_RS14810 IPR002912 ACT domain RD05_RS14810 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RD05_RS14810 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain RD05_RS14810 IPR018528 Prephenate dehydratase, conserved site RD05_RS14810 IPR020822 Chorismate mutase, type II RD05_RS14815 IPR000192 Aminotransferase class V domain RD05_RS14815 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS14815 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS14815 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS14815 IPR022278 Phosphoserine aminotransferase RD05_RS14820 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RD05_RS14820 IPR005743 DNA gyrase, subunit A RD05_RS14820 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RD05_RS14820 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain RD05_RS14820 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RD05_RS14820 IPR013760 DNA topoisomerase, type IIA-like domain RD05_RS14820 IPR024946 Arginine repressor C-terminal-like domain RD05_RS14825 IPR006664 Outer membrane protein, bacterial RD05_RS14825 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD05_RS14825 IPR006690 Outer membrane protein, OmpA-like, conserved site RD05_RS14830 IPR010233 Ubiquinone biosynthesis O-methyltransferase RD05_RS14830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS14835 IPR006346 2-phosphoglycolate phosphatase, prokaryotic RD05_RS14835 IPR006439 HAD hydrolase, subfamily IA RD05_RS14835 IPR023198 Phosphoglycolate phosphatase, domain 2 RD05_RS14835 IPR023214 HAD-like domain RD05_RS14840 IPR011701 Major facilitator superfamily RD05_RS14840 IPR020846 Major facilitator superfamily domain RD05_RS14850 IPR012933 HicA mRNA interferase family RD05_RS14855 IPR001584 Integrase, catalytic core RD05_RS14855 IPR009057 Homeodomain-like RD05_RS14855 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14855 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14855 IPR012337 Ribonuclease H-like domain RD05_RS14855 IPR024967 DNA-binding domain, IS481-type RD05_RS14860 IPR031807 RD05_RS14860 RD05_RS14865 IPR000847 Transcription regulator HTH, LysR RD05_RS14865 IPR005119 LysR, substrate-binding RD05_RS14865 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14870 IPR005064 Bordetella uptake gene RD05_RS14875 IPR001584 Integrase, catalytic core RD05_RS14875 IPR009057 Homeodomain-like RD05_RS14875 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14875 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14875 IPR012337 Ribonuclease H-like domain RD05_RS14875 IPR024967 DNA-binding domain, IS481-type RD05_RS14880 IPR001126 DNA-repair protein, UmuC-like RD05_RS14880 IPR017961 DNA polymerase, Y-family, little finger domain RD05_RS14880 IPR022880 DNA polymerase IV RD05_RS14880 IPR024728 DNA polymerase type-Y, HhH motif RD05_RS14885 IPR003736 Phenylacetic acid degradation-related domain RD05_RS14885 IPR006683 Thioesterase superfamily RD05_RS14885 IPR029069 HotDog domain RD05_RS14890 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RD05_RS14890 IPR015943 WD40/YVTN repeat-like-containing domain RD05_RS14890 IPR029058 Alpha/Beta hydrolase fold RD05_RS14895 IPR001264 Glycosyl transferase, family 51 RD05_RS14895 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS14895 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS14895 IPR012340 Nucleic acid-binding, OB-fold RD05_RS14895 IPR023346 Lysozyme-like domain RD05_RS14895 IPR031376 RD05_RS14895 RD05_RS14900 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD05_RS14900 IPR029052 Metallo-dependent phosphatase-like RD05_RS14905 IPR005625 PepSY-associated TM helix RD05_RS14915 IPR001395 Aldo/keto reductase RD05_RS14915 IPR020471 Aldo/keto reductase subgroup RD05_RS14915 IPR023210 NADP-dependent oxidoreductase domain RD05_RS14920 IPR001395 Aldo/keto reductase RD05_RS14920 IPR018170 Aldo/keto reductase, conserved site RD05_RS14920 IPR020471 Aldo/keto reductase subgroup RD05_RS14920 IPR023210 NADP-dependent oxidoreductase domain RD05_RS14925 IPR003439 ABC transporter-like RD05_RS14925 IPR003593 AAA+ ATPase domain RD05_RS14925 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS14925 IPR017871 ABC transporter, conserved site RD05_RS14925 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS14930 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS14935 IPR001584 Integrase, catalytic core RD05_RS14935 IPR009057 Homeodomain-like RD05_RS14935 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14935 IPR012337 Ribonuclease H-like domain RD05_RS14935 IPR024967 DNA-binding domain, IS481-type RD05_RS14950 IPR008928 Six-hairpin glycosidase-like RD05_RS14950 IPR012341 Six-hairpin glycosidase RD05_RS14965 IPR001584 Integrase, catalytic core RD05_RS14965 IPR009057 Homeodomain-like RD05_RS14965 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS14965 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14965 IPR012337 Ribonuclease H-like domain RD05_RS14965 IPR024967 DNA-binding domain, IS481-type RD05_RS14970 IPR000022 Carboxyl transferase RD05_RS14970 IPR029045 ClpP/crotonase-like domain RD05_RS14975 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RD05_RS14975 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD05_RS14975 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD05_RS14975 IPR005482 Biotin carboxylase, C-terminal RD05_RS14975 IPR011054 Rudiment single hybrid motif RD05_RS14975 IPR013815 ATP-grasp fold, subdomain 1 RD05_RS14975 IPR013816 ATP-grasp fold, subdomain 2 RD05_RS14975 IPR016185 Pre-ATP-grasp domain RD05_RS14980 IPR000524 Transcription regulator HTH, GntR RD05_RS14980 IPR011663 UbiC transcription regulator-associated RD05_RS14980 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS14980 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD05_RS14985 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD05_RS14985 IPR016040 NAD(P)-binding domain RD05_RS14990 IPR006680 Amidohydrolase 1 RD05_RS14990 IPR032466 RD05_RS14990 RD05_RS14995 IPR011008 Dimeric alpha-beta barrel RD05_RS15000 IPR000891 Pyruvate carboxyltransferase RD05_RS15000 IPR003379 Carboxylase, conserved domain RD05_RS15000 IPR013785 Aldolase-type TIM barrel RD05_RS15005 IPR000089 Biotin/lipoyl attachment RD05_RS15005 IPR001249 Acetyl-CoA biotin carboxyl carrier RD05_RS15005 IPR001882 Biotin-binding site RD05_RS15005 IPR011053 Single hybrid motif RD05_RS15010 IPR005656 MmgE/PrpD RD05_RS15015 IPR006674 HD domain RD05_RS15015 IPR029016 GAF domain-like RD05_RS15030 IPR003187 Phospholipase A1 RD05_RS15035 IPR009875 PilZ domain RD05_RS15035 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal RD05_RS15035 IPR012349 FMN-binding split barrel RD05_RS15035 IPR023787 Type III secretion system flagellar brake protein YcgR RD05_RS15040 IPR021747 Protein of unknown function DUF3313 RD05_RS15050 IPR008854 TPMT family RD05_RS15050 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification RD05_RS15050 IPR025835 Thiopurine S-methyltransferase RD05_RS15050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS15055 IPR003439 ABC transporter-like RD05_RS15055 IPR003593 AAA+ ATPase domain RD05_RS15055 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS15055 IPR017871 ABC transporter, conserved site RD05_RS15055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15060 IPR001584 Integrase, catalytic core RD05_RS15060 IPR009057 Homeodomain-like RD05_RS15060 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15060 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15060 IPR012337 Ribonuclease H-like domain RD05_RS15060 IPR024967 DNA-binding domain, IS481-type RD05_RS15065 IPR032692 RD05_RS15065 RD05_RS15070 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS15070 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS15070 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS15070 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD05_RS15070 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS15070 IPR029061 Thiamin diphosphate-binding fold RD05_RS15075 IPR004789 Acetolactate synthase, small subunit RD05_RS15075 IPR019455 Acetolactate synthase, small subunit, C-terminal RD05_RS15080 IPR000506 Acetohydroxy acid isomeroreductase C-terminal RD05_RS15080 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS15080 IPR013023 Acetohydroxy acid isomeroreductase RD05_RS15080 IPR013116 Acetohydroxy acid isomeroreductase, catalytic RD05_RS15080 IPR013328 Dehydrogenase, multihelical RD05_RS15080 IPR016040 NAD(P)-binding domain RD05_RS15080 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS15085 IPR000462 CDP-alcohol phosphatidyltransferase RD05_RS15085 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase RD05_RS15095 IPR000589 Ribosomal protein S15 RD05_RS15095 IPR005290 Ribosomal protein S15, bacterial-type RD05_RS15095 IPR009068 S15/NS1, RNA-binding RD05_RS15100 IPR001247 Exoribonuclease, phosphorolytic domain 1 RD05_RS15100 IPR003029 Ribosomal protein S1, RNA-binding domain RD05_RS15100 IPR004087 K Homology domain RD05_RS15100 IPR004088 K Homology domain, type 1 RD05_RS15100 IPR012162 Polyribonucleotide nucleotidyltransferase RD05_RS15100 IPR012340 Nucleic acid-binding, OB-fold RD05_RS15100 IPR015847 Exoribonuclease, phosphorolytic domain 2 RD05_RS15100 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RD05_RS15100 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS15100 IPR022967 RNA-binding domain, S1 RD05_RS15100 IPR027408 PNPase/RNase PH domain RD05_RS15110 IPR001584 Integrase, catalytic core RD05_RS15110 IPR009057 Homeodomain-like RD05_RS15110 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15110 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15110 IPR012337 Ribonuclease H-like domain RD05_RS15110 IPR024967 DNA-binding domain, IS481-type RD05_RS15115 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS15115 IPR005789 Threonine dehydratase, catabolic RD05_RS15120 IPR002716 PIN domain RD05_RS15130 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS15130 IPR011032 GroES (chaperonin 10)-like RD05_RS15130 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS15130 IPR013154 Alcohol dehydrogenase GroES-like RD05_RS15130 IPR014189 Quinone oxidoreductase PIG3 RD05_RS15130 IPR016040 NAD(P)-binding domain RD05_RS15130 IPR020843 Polyketide synthase, enoylreductase RD05_RS15135 IPR000652 Triosephosphate isomerase RD05_RS15135 IPR013785 Aldolase-type TIM barrel RD05_RS15135 IPR020861 Triosephosphate isomerase, active site RD05_RS15135 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RD05_RS15140 IPR004692 Preprotein translocase SecG subunit RD05_RS15150 IPR000060 BCCT transporter family RD05_RS15155 IPR005471 Transcription regulator IclR, N-terminal RD05_RS15155 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15155 IPR014757 Transcription regulator IclR, C-terminal RD05_RS15155 IPR029016 GAF domain-like RD05_RS15160 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD05_RS15160 IPR006395 Methylaspartate ammonia-lyase RD05_RS15160 IPR022662 Methylaspartate ammonia-lyase, C-terminal RD05_RS15160 IPR022665 Methylaspartate ammonia-lyase, N-terminal RD05_RS15160 IPR029017 Enolase N-terminal domain-like RD05_RS15160 IPR029065 Enolase C-terminal domain-like RD05_RS15165 IPR005064 Bordetella uptake gene RD05_RS15170 IPR005656 MmgE/PrpD RD05_RS15175 IPR008948 L-Aspartase-like RD05_RS15180 IPR000362 Fumarate lyase family RD05_RS15180 IPR008948 L-Aspartase-like RD05_RS15180 IPR009049 Argininosuccinate lyase RD05_RS15180 IPR022761 Fumarate lyase, N-terminal RD05_RS15180 IPR029419 Argininosuccinate lyase, C-terminal RD05_RS15185 IPR005064 Bordetella uptake gene RD05_RS15190 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD05_RS15190 IPR003346 Transposase, IS116/IS110/IS902 RD05_RS15195 IPR002347 Glucose/ribitol dehydrogenase RD05_RS15195 IPR016040 NAD(P)-binding domain RD05_RS15200 IPR000847 Transcription regulator HTH, LysR RD05_RS15200 IPR005119 LysR, substrate-binding RD05_RS15200 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15205 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD05_RS15205 IPR006233 Cystathionine beta-lyase, bacterial RD05_RS15205 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS15205 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS15205 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS15210 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD05_RS15215 IPR005064 Bordetella uptake gene RD05_RS15220 IPR001763 Rhodanese-like domain RD05_RS15220 IPR011051 RmlC-like cupin domain RD05_RS15220 IPR014710 RmlC-like jelly roll fold RD05_RS15225 IPR005064 Bordetella uptake gene RD05_RS15230 IPR006076 FAD dependent oxidoreductase RD05_RS15230 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS15235 IPR003692 Hydantoinase B/oxoprolinase RD05_RS15240 IPR002821 Hydantoinase/oxoprolinase RD05_RS15240 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD05_RS15245 IPR005471 Transcription regulator IclR, N-terminal RD05_RS15245 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15245 IPR029016 GAF domain-like RD05_RS15250 IPR000923 Blue (type 1) copper domain RD05_RS15250 IPR008972 Cupredoxin RD05_RS15250 IPR014068 Azurin, proteobacteria RD05_RS15250 IPR028871 Blue (type 1) copper protein, binding site RD05_RS15255 IPR005149 Transcription regulator PadR N-terminal RD05_RS15255 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15260 IPR003423 Outer membrane efflux protein RD05_RS15260 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD05_RS15265 IPR001036 Acriflavin resistance protein RD05_RS15265 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS15270 IPR006143 RND efflux pump, membrane fusion protein RD05_RS15270 IPR032317 RD05_RS15270 RD05_RS15275 IPR002577 Helix-turn-helix, HxlR type RD05_RS15275 IPR003033 SCP2 sterol-binding domain RD05_RS15275 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15275 IPR029229 Alkyl sulfatase, C-terminal RD05_RS15280 IPR001584 Integrase, catalytic core RD05_RS15280 IPR009057 Homeodomain-like RD05_RS15280 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15280 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15280 IPR012337 Ribonuclease H-like domain RD05_RS15280 IPR024967 DNA-binding domain, IS481-type RD05_RS15285 IPR000060 BCCT transporter family RD05_RS15285 IPR018093 BCCT transporter, conserved site RD05_RS15290 IPR000847 Transcription regulator HTH, LysR RD05_RS15290 IPR005119 LysR, substrate-binding RD05_RS15290 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15295 IPR001206 Diacylglycerol kinase, catalytic domain RD05_RS15295 IPR016064 ATP-NAD kinase-like domain RD05_RS15300 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD05_RS15300 IPR029052 Metallo-dependent phosphatase-like RD05_RS15305 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RD05_RS15310 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS15310 IPR016040 NAD(P)-binding domain RD05_RS15315 IPR003736 Phenylacetic acid degradation-related domain RD05_RS15315 IPR006683 Thioesterase superfamily RD05_RS15315 IPR029069 HotDog domain RD05_RS15320 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS15320 IPR009057 Homeodomain-like RD05_RS15320 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS15325 IPR001584 Integrase, catalytic core RD05_RS15325 IPR009057 Homeodomain-like RD05_RS15325 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15325 IPR012337 Ribonuclease H-like domain RD05_RS15325 IPR024967 DNA-binding domain, IS481-type RD05_RS15330 IPR001702 Porin, Gram-negative type RD05_RS15330 IPR002299 Porin, Neisseria sp. type RD05_RS15330 IPR023614 Porin domain RD05_RS15335 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RD05_RS15335 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RD05_RS15340 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RD05_RS15340 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RD05_RS15345 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RD05_RS15345 IPR010218 NADH dehydrogenase, subunit C RD05_RS15345 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site RD05_RS15350 IPR001135 NADH-quinone oxidoreductase, subunit D RD05_RS15350 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RD05_RS15350 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RD05_RS15350 IPR029014 NiFe hydrogenase-like RD05_RS15355 IPR002023 NADH-quinone oxidoreductase subunit E-like RD05_RS15355 IPR012336 Thioredoxin-like fold RD05_RS15360 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RD05_RS15360 IPR011537 NADH ubiquinone oxidoreductase, F subunit RD05_RS15360 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit RD05_RS15360 IPR019554 Soluble ligand binding domain RD05_RS15360 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding RD05_RS15365 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RD05_RS15365 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS15365 IPR006656 Molybdopterin oxidoreductase RD05_RS15365 IPR006657 Molydopterin dinucleotide-binding domain RD05_RS15365 IPR009010 Aspartate decarboxylase-like domain RD05_RS15365 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RD05_RS15365 IPR012675 Beta-grasp domain RD05_RS15365 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RD05_RS15370 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RD05_RS15370 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RD05_RS15375 IPR010226 NADH-quinone oxidoreductase, chain I RD05_RS15375 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS15375 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS15380 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RD05_RS15385 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RD05_RS15390 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RD05_RS15390 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD05_RS15390 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RD05_RS15390 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RD05_RS15395 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD05_RS15395 IPR003918 NADH:ubiquinone oxidoreductase RD05_RS15395 IPR010227 NADH-quinone oxidoreductase, chain M/4 RD05_RS15400 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD05_RS15400 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RD05_RS15405 IPR016768 Uncharacterised conserved protein UCP019883, membrane RD05_RS15410 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS15410 IPR010105 TonB-dependent siderophore receptor RD05_RS15410 IPR012910 TonB-dependent receptor, plug RD05_RS15410 IPR030148 RD05_RS15410 RD05_RS15415 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS15415 IPR010105 TonB-dependent siderophore receptor RD05_RS15415 IPR012910 TonB-dependent receptor, plug RD05_RS15415 IPR030148 RD05_RS15415 RD05_RS15420 IPR000182 GNAT domain RD05_RS15420 IPR016181 Acyl-CoA N-acyltransferase RD05_RS15425 IPR002347 Glucose/ribitol dehydrogenase RD05_RS15425 IPR016040 NAD(P)-binding domain RD05_RS15425 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS15430 IPR000399 TPP-binding enzyme, conserved site RD05_RS15430 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS15430 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS15430 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS15430 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS15430 IPR029061 Thiamin diphosphate-binding fold RD05_RS15435 IPR005064 Bordetella uptake gene RD05_RS15440 IPR000847 Transcription regulator HTH, LysR RD05_RS15440 IPR005119 LysR, substrate-binding RD05_RS15440 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15445 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like RD05_RS15445 IPR023190 Phosphoserine phosphatase, domain 2 RD05_RS15445 IPR023214 HAD-like domain RD05_RS15445 IPR025138 Domain of unknown function DUF4072 RD05_RS15450 IPR001650 Helicase, C-terminal RD05_RS15450 IPR003711 CarD-like/TRCF domain RD05_RS15450 IPR004576 Transcription-repair coupling factor RD05_RS15450 IPR005118 Transcription-repair-coupling factor, C-terminal domain RD05_RS15450 IPR011545 DEAD/DEAH box helicase domain RD05_RS15450 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS15450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15455 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD05_RS15455 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RD05_RS15455 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS15460 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RD05_RS15460 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RD05_RS15465 IPR001584 Integrase, catalytic core RD05_RS15465 IPR009057 Homeodomain-like RD05_RS15465 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15465 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15465 IPR012337 Ribonuclease H-like domain RD05_RS15465 IPR024967 DNA-binding domain, IS481-type RD05_RS15470 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase RD05_RS15470 IPR028343 Fructose-1,6-bisphosphatase RD05_RS15470 IPR033391 RD05_RS15470 RD05_RS15475 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RD05_RS15475 IPR012779 Peptidase M1, alanyl aminopeptidase RD05_RS15475 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal RD05_RS15475 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RD05_RS15480 IPR025411 Domain of unknown function DUF4136 RD05_RS15485 IPR001584 Integrase, catalytic core RD05_RS15485 IPR009057 Homeodomain-like RD05_RS15485 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15485 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15485 IPR012337 Ribonuclease H-like domain RD05_RS15485 IPR024967 DNA-binding domain, IS481-type RD05_RS15490 IPR006685 Mechanosensitive ion channel MscS RD05_RS15490 IPR010920 Like-Sm (LSM) domain RD05_RS15490 IPR011066 Mechanosensitive ion channel MscS, C-terminal RD05_RS15495 IPR000399 TPP-binding enzyme, conserved site RD05_RS15495 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS15495 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS15495 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS15495 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS15495 IPR029061 Thiamin diphosphate-binding fold RD05_RS15500 IPR025870 Glyoxalase-like domain RD05_RS15500 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS15505 IPR015168 SsuA/THI5-like RD05_RS15505 IPR027939 NMT1/THI5 family RD05_RS15510 IPR003439 ABC transporter-like RD05_RS15510 IPR003593 AAA+ ATPase domain RD05_RS15510 IPR017871 ABC transporter, conserved site RD05_RS15510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15515 IPR000515 MetI-like domain RD05_RS15520 IPR021259 Protein of unknown function DUF2817 RD05_RS15525 IPR000873 AMP-dependent synthetase/ligase RD05_RS15525 IPR020845 AMP-binding, conserved site RD05_RS15525 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS15530 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS15530 IPR011032 GroES (chaperonin 10)-like RD05_RS15530 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS15530 IPR013154 Alcohol dehydrogenase GroES-like RD05_RS15530 IPR016040 NAD(P)-binding domain RD05_RS15530 IPR020843 Polyketide synthase, enoylreductase RD05_RS15535 IPR000524 Transcription regulator HTH, GntR RD05_RS15535 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS15535 IPR011711 GntR, C-terminal RD05_RS15535 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15540 IPR005546 Autotransporter beta-domain RD05_RS15540 IPR006315 Outer membrane autotransporter barrel RD05_RS15545 IPR000524 Transcription regulator HTH, GntR RD05_RS15545 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS15545 IPR011711 GntR, C-terminal RD05_RS15545 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15550 IPR000399 TPP-binding enzyme, conserved site RD05_RS15550 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS15550 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS15550 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS15550 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS15550 IPR029061 Thiamin diphosphate-binding fold RD05_RS15555 IPR002347 Glucose/ribitol dehydrogenase RD05_RS15555 IPR016040 NAD(P)-binding domain RD05_RS15560 IPR005064 Bordetella uptake gene RD05_RS15570 IPR001544 Aminotransferase, class IV RD05_RS15575 IPR003439 ABC transporter-like RD05_RS15575 IPR003593 AAA+ ATPase domain RD05_RS15575 IPR017871 ABC transporter, conserved site RD05_RS15575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15575 IPR030206 RD05_RS15575 RD05_RS15575 IPR030679 RD05_RS15575 RD05_RS15580 IPR000515 MetI-like domain RD05_RS15580 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS15580 IPR030205 RD05_RS15580 RD05_RS15590 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS15595 IPR000847 Transcription regulator HTH, LysR RD05_RS15595 IPR005119 LysR, substrate-binding RD05_RS15595 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15600 IPR003423 Outer membrane efflux protein RD05_RS15600 IPR028351 Cyclolysin transport protein CyaE RD05_RS15605 IPR003997 RTX secretion protein D, Gram-negative bacteria RD05_RS15605 IPR006144 Secretion protein HlyD, conserved site RD05_RS15605 IPR010129 Type I secretion membrane fusion protein, HlyD RD05_RS15610 IPR003439 ABC transporter-like RD05_RS15610 IPR003593 AAA+ ATPase domain RD05_RS15610 IPR005074 Peptidase C39, bacteriocin processing RD05_RS15610 IPR010132 ATPase, type I secretion system, HlyB RD05_RS15610 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS15610 IPR017871 ABC transporter, conserved site RD05_RS15610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15615 IPR001343 Haemolysin-type calcium-binding repeat RD05_RS15615 IPR003995 RTX toxin determinant A RD05_RS15615 IPR005165 Anthrax toxin, edema factor, central RD05_RS15615 IPR011049 Serralysin-like metalloprotease, C-terminal RD05_RS15615 IPR018504 RTX N-terminal RD05_RS15615 IPR018511 Hemolysin-type calcium-binding conserved site RD05_RS15625 IPR003996 RTX toxin-activating protein C, bacteria RD05_RS15630 IPR010102 Succinate semialdehyde dehydrogenase RD05_RS15630 IPR015590 Aldehyde dehydrogenase domain RD05_RS15630 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS15630 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS15630 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS15630 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS15630 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS15635 IPR001584 Integrase, catalytic core RD05_RS15635 IPR009057 Homeodomain-like RD05_RS15635 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15635 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15635 IPR012337 Ribonuclease H-like domain RD05_RS15635 IPR024967 DNA-binding domain, IS481-type RD05_RS15640 IPR006076 FAD dependent oxidoreductase RD05_RS15640 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS15645 IPR003692 Hydantoinase B/oxoprolinase RD05_RS15650 IPR002821 Hydantoinase/oxoprolinase RD05_RS15650 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD05_RS15655 IPR000847 Transcription regulator HTH, LysR RD05_RS15655 IPR005119 LysR, substrate-binding RD05_RS15655 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15665 IPR000092 Polyprenyl synthetase RD05_RS15665 IPR008949 Terpenoid synthase RD05_RS15665 IPR017446 Polyprenyl synthetase-related RD05_RS15670 IPR011234 Fumarylacetoacetase, C-terminal-related RD05_RS15675 IPR001787 Ribosomal protein L21 RD05_RS15675 IPR018258 Ribosomal protein L21, conserved site RD05_RS15675 IPR028909 Ribosomal protein L21-like RD05_RS15680 IPR001684 Ribosomal protein L27 RD05_RS15680 IPR018261 Ribosomal protein L27, conserved site RD05_RS15685 IPR006073 GTP binding domain RD05_RS15685 IPR006074 GTP1/OBG, conserved site RD05_RS15685 IPR006169 GTP1/OBG domain RD05_RS15685 IPR014100 GTP-binding protein Obg/CgtA RD05_RS15685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15690 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS15690 IPR001057 Glutamate/acetylglutamate kinase RD05_RS15690 IPR002478 PUA domain RD05_RS15690 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase RD05_RS15690 IPR011529 Glutamate 5-kinase RD05_RS15690 IPR015947 PUA-like domain RD05_RS15690 IPR019797 Glutamate 5-kinase, conserved site RD05_RS15695 IPR001867 Signal transduction response regulator, C-terminal RD05_RS15695 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15695 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS15700 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS15700 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15705 IPR001584 Integrase, catalytic core RD05_RS15705 IPR009057 Homeodomain-like RD05_RS15705 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15705 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15705 IPR012337 Ribonuclease H-like domain RD05_RS15705 IPR024967 DNA-binding domain, IS481-type RD05_RS15710 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15720 IPR001584 Integrase, catalytic core RD05_RS15720 IPR009057 Homeodomain-like RD05_RS15720 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15720 IPR012337 Ribonuclease H-like domain RD05_RS15720 IPR024967 DNA-binding domain, IS481-type RD05_RS15730 IPR006860 FecR protein RD05_RS15730 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD05_RS15730 IPR032623 RD05_RS15730 RD05_RS15735 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS15735 IPR010105 TonB-dependent siderophore receptor RD05_RS15735 IPR011662 Secretin/TonB, short N-terminal RD05_RS15735 IPR012910 TonB-dependent receptor, plug RD05_RS15740 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RD05_RS15750 IPR001584 Integrase, catalytic core RD05_RS15750 IPR009057 Homeodomain-like RD05_RS15750 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15750 IPR012337 Ribonuclease H-like domain RD05_RS15750 IPR024967 DNA-binding domain, IS481-type RD05_RS15755 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase RD05_RS15755 IPR016040 NAD(P)-binding domain RD05_RS15755 IPR032095 RD05_RS15755 RD05_RS15760 IPR005730 Carboxynorspermidine decarboxylase RD05_RS15760 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD05_RS15760 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RD05_RS15760 IPR029066 PLP-binding barrel RD05_RS15765 IPR001584 Integrase, catalytic core RD05_RS15765 IPR009057 Homeodomain-like RD05_RS15765 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15765 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15765 IPR012337 Ribonuclease H-like domain RD05_RS15765 IPR024967 DNA-binding domain, IS481-type RD05_RS15770 IPR009057 Homeodomain-like RD05_RS15770 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS15775 IPR005471 Transcription regulator IclR, N-terminal RD05_RS15775 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15775 IPR014757 Transcription regulator IclR, C-terminal RD05_RS15775 IPR029016 GAF domain-like RD05_RS15780 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS15780 IPR030678 RD05_RS15780 RD05_RS15785 IPR000515 MetI-like domain RD05_RS15790 IPR000515 MetI-like domain RD05_RS15795 IPR003439 ABC transporter-like RD05_RS15795 IPR003593 AAA+ ATPase domain RD05_RS15795 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS15795 IPR017871 ABC transporter, conserved site RD05_RS15795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15800 IPR000120 Amidase RD05_RS15800 IPR020556 Amidase, conserved site RD05_RS15800 IPR023631 Amidase signature domain RD05_RS15805 IPR005814 Aminotransferase class-III RD05_RS15805 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS15805 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS15805 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS15810 IPR009409 Protein of unknown function DUF1059 RD05_RS15815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS15820 IPR001584 Integrase, catalytic core RD05_RS15820 IPR009057 Homeodomain-like RD05_RS15820 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15820 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15820 IPR012337 Ribonuclease H-like domain RD05_RS15820 IPR024967 DNA-binding domain, IS481-type RD05_RS15825 IPR006664 Outer membrane protein, bacterial RD05_RS15825 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD05_RS15830 IPR001533 Transcriptional coactivator/pterin dehydratase RD05_RS15840 IPR005835 Nucleotidyl transferase RD05_RS15840 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS15845 IPR002575 Aminoglycoside phosphotransferase RD05_RS15845 IPR011009 Protein kinase-like domain RD05_RS15850 IPR007543 Organic solvent tolerance protein, C-terminal RD05_RS15850 IPR020889 Lipopolysaccharide assembly, LptD RD05_RS15855 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD05_RS15855 IPR015391 SurA N-terminal RD05_RS15855 IPR023034 Peptidyl-prolyl isomerase SurA RD05_RS15855 IPR027304 Trigger factor/SurA domain RD05_RS15860 IPR001737 Ribosomal RNA adenine methylase transferase RD05_RS15860 IPR011530 Ribosomal RNA adenine dimethylase RD05_RS15860 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RD05_RS15860 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RD05_RS15860 IPR023165 rRNA adenine dimethylase-like RD05_RS15860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS15865 IPR004381 Glycerate kinase RD05_RS15865 IPR018193 Glycerate kinase, flavodoxin-like domain RD05_RS15870 IPR001697 Pyruvate kinase RD05_RS15870 IPR011037 Pyruvate kinase-like, insert domain RD05_RS15870 IPR015793 Pyruvate kinase, barrel RD05_RS15870 IPR015794 Pyruvate kinase, alpha/beta RD05_RS15870 IPR015795 Pyruvate kinase, C-terminal RD05_RS15870 IPR015806 Pyruvate kinase, beta-barrel insert domain RD05_RS15870 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS15870 IPR018209 Pyruvate kinase, active site RD05_RS15875 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB RD05_RS15875 IPR011642 Nucleoside recognition Gate RD05_RS15880 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS15880 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS15880 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS15880 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS15880 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type RD05_RS15885 IPR001584 Integrase, catalytic core RD05_RS15885 IPR009057 Homeodomain-like RD05_RS15885 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS15885 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15885 IPR012337 Ribonuclease H-like domain RD05_RS15885 IPR024967 DNA-binding domain, IS481-type RD05_RS15890 IPR000101 Gamma-glutamyltranspeptidase RD05_RS15890 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS15895 IPR005064 Bordetella uptake gene RD05_RS15900 IPR005064 Bordetella uptake gene RD05_RS15905 IPR003439 ABC transporter-like RD05_RS15905 IPR003593 AAA+ ATPase domain RD05_RS15905 IPR017871 ABC transporter, conserved site RD05_RS15905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS15910 IPR000522 ABC transporter, permease protein RD05_RS15910 IPR029022 ABC transporter, BtuC-like RD05_RS15915 IPR011990 Tetratricopeptide-like helical domain RD05_RS15915 IPR014162 Tol-Pal system, YbgF RD05_RS15915 IPR019734 Tetratricopeptide repeat RD05_RS15920 IPR006664 Outer membrane protein, bacterial RD05_RS15920 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD05_RS15920 IPR006690 Outer membrane protein, OmpA-like, conserved site RD05_RS15920 IPR014169 Peptidoglycan-associated lipoprotein RD05_RS15925 IPR007195 TolB, N-terminal RD05_RS15925 IPR011659 WD40-like Beta Propeller RD05_RS15925 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB RD05_RS15925 IPR015943 WD40/YVTN repeat-like-containing domain RD05_RS15930 IPR006260 TonB, C-terminal RD05_RS15930 IPR014161 Tol-Pal system, TolA RD05_RS15935 IPR003400 Biopolymer transport protein ExbD/TolR RD05_RS15935 IPR014168 Biopolymer transport, TolR RD05_RS15940 IPR002898 MotA/TolQ/ExbB proton channel RD05_RS15940 IPR014163 Tol-Pal system, TolQ RD05_RS15945 IPR006683 Thioesterase superfamily RD05_RS15945 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family RD05_RS15945 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase RD05_RS15945 IPR029069 HotDog domain RD05_RS15950 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD05_RS15950 IPR002316 Proline-tRNA ligase, class IIa RD05_RS15950 IPR004154 Anticodon-binding RD05_RS15950 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RD05_RS15950 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RD05_RS15950 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RD05_RS15955 IPR000086 NUDIX hydrolase domain RD05_RS15955 IPR015797 NUDIX hydrolase domain-like RD05_RS15955 IPR020084 NUDIX hydrolase, conserved site RD05_RS15955 IPR020476 NUDIX hydrolase RD05_RS15955 IPR022927 RNA pyrophosphohydrolase RppH RD05_RS15960 IPR001789 Signal transduction response regulator, receiver domain RD05_RS15960 IPR001867 Signal transduction response regulator, C-terminal RD05_RS15960 IPR011006 CheY-like superfamily RD05_RS15960 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS15965 IPR013727 Two-component sensor kinase N-terminal RD05_RS15970 IPR003738 Protein of unknown function DUF159 RD05_RS15985 IPR019659 Protein of unknown function DUF2514 RD05_RS15990 IPR023346 Lysozyme-like domain RD05_RS15990 IPR023347 Lysozyme domain RD05_RS15995 IPR032124 RD05_RS15995 RD05_RS16000 IPR013425 Autotransporter-associated beta strand repeat RD05_RS16015 IPR015406 Domain of unknown function DUF1983 RD05_RS16015 IPR032876 RD05_RS16015 RD05_RS16020 IPR000064 Endopeptidase, NLPC/P60 domain RD05_RS16025 IPR014974 Domain of unknown function DUF1833 RD05_RS16035 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RD05_RS16035 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal RD05_RS16040 IPR014915 Bacteriophage TLS, TfmB RD05_RS16045 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RD05_RS16045 IPR014859 Protein of unknown function DUF1789 RD05_RS16050 IPR014918 Bacteriophage T1, Orf41 RD05_RS16055 IPR003615 HNH nuclease RD05_RS16055 IPR016177 DNA-binding domain RD05_RS16060 IPR025395 Protein of unknown function DUF4128 RD05_RS16095 IPR001584 Integrase, catalytic core RD05_RS16095 IPR009057 Homeodomain-like RD05_RS16095 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16095 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16095 IPR012337 Ribonuclease H-like domain RD05_RS16095 IPR024967 DNA-binding domain, IS481-type RD05_RS16115 IPR006528 Phage head morphogenesis domain RD05_RS16115 IPR017029 Putative phage head morphogenesis protein RD05_RS16120 IPR025129 Domain of unknown function DUF4055 RD05_RS16125 IPR004921 Terminase, large subunit RD05_RS16135 IPR001584 Integrase, catalytic core RD05_RS16135 IPR009057 Homeodomain-like RD05_RS16135 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16135 IPR012337 Ribonuclease H-like domain RD05_RS16135 IPR024967 DNA-binding domain, IS481-type RD05_RS16155 IPR015927 Peptidase S24/S26A/S26B/S26C RD05_RS16155 IPR028360 Peptidase S24/S26, beta-ribbon domain RD05_RS16165 IPR001584 Integrase, catalytic core RD05_RS16165 IPR009057 Homeodomain-like RD05_RS16165 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16165 IPR012337 Ribonuclease H-like domain RD05_RS16165 IPR024967 DNA-binding domain, IS481-type RD05_RS16175 IPR004872 Lipoprotein NlpA family RD05_RS16180 IPR008318 Uncharacterised conserved protein UCP030820 RD05_RS16185 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RD05_RS16185 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RD05_RS16190 IPR003439 ABC transporter-like RD05_RS16190 IPR003593 AAA+ ATPase domain RD05_RS16190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16195 IPR003439 ABC transporter-like RD05_RS16195 IPR003593 AAA+ ATPase domain RD05_RS16195 IPR017871 ABC transporter, conserved site RD05_RS16195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16195 IPR032823 RD05_RS16195 RD05_RS16200 IPR001851 ABC transporter, permease RD05_RS16205 IPR001851 ABC transporter, permease RD05_RS16210 IPR028081 Leucine-binding protein domain RD05_RS16210 IPR028082 Periplasmic binding protein-like I RD05_RS16215 IPR000120 Amidase RD05_RS16215 IPR020556 Amidase, conserved site RD05_RS16215 IPR023631 Amidase signature domain RD05_RS16220 IPR001765 Carbonic anhydrase RD05_RS16220 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site RD05_RS16230 IPR001584 Integrase, catalytic core RD05_RS16230 IPR009057 Homeodomain-like RD05_RS16230 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16230 IPR012337 Ribonuclease H-like domain RD05_RS16230 IPR024967 DNA-binding domain, IS481-type RD05_RS16235 IPR001650 Helicase, C-terminal RD05_RS16235 IPR002121 HRDC domain RD05_RS16235 IPR004589 DNA helicase, ATP-dependent, RecQ type RD05_RS16235 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial RD05_RS16235 IPR010997 HRDC-like RD05_RS16235 IPR011545 DEAD/DEAH box helicase domain RD05_RS16235 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16235 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS16235 IPR018982 RQC domain RD05_RS16235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16235 IPR032284 RD05_RS16235 RD05_RS16240 IPR003593 AAA+ ATPase domain RD05_RS16240 IPR004605 DNA helicase, Holliday junction RuvB type RD05_RS16240 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal RD05_RS16240 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal RD05_RS16240 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16245 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS16250 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD05_RS16250 IPR016040 NAD(P)-binding domain RD05_RS16255 IPR000085 Bacterial DNA recombination protein RuvA RD05_RS16255 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD05_RS16255 IPR010994 RuvA domain 2-like RD05_RS16255 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal RD05_RS16255 IPR012340 Nucleic acid-binding, OB-fold RD05_RS16255 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RD05_RS16260 IPR002176 Crossover junction endodeoxyribonuclease RuvC RD05_RS16260 IPR012337 Ribonuclease H-like domain RD05_RS16260 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RD05_RS16265 IPR002695 AICARFT/IMPCHase bienzyme RD05_RS16265 IPR011607 Methylglyoxal synthase-like domain RD05_RS16265 IPR016193 Cytidine deaminase-like RD05_RS16265 IPR024051 AICAR transformylase domain RD05_RS16270 IPR002197 DNA binding HTH domain, Fis-type RD05_RS16270 IPR005412 DNA-binding protein Fis RD05_RS16270 IPR009057 Homeodomain-like RD05_RS16275 IPR001269 tRNA-dihydrouridine synthase RD05_RS16275 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RD05_RS16275 IPR013785 Aldolase-type TIM barrel RD05_RS16275 IPR018517 tRNA-dihydrouridine synthase, conserved site RD05_RS16275 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RD05_RS16275 IPR032887 RD05_RS16275 RD05_RS16280 IPR002938 Monooxygenase, FAD-binding RD05_RS16280 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RD05_RS16280 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RD05_RS16280 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS16290 IPR000994 Peptidase M24, structural domain RD05_RS16290 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RD05_RS16290 IPR007865 Aminopeptidase P, N-terminal RD05_RS16290 IPR028980 Creatinase/Aminopeptidase P, N-terminal RD05_RS16290 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RD05_RS16295 IPR004837 Sodium/calcium exchanger membrane region RD05_RS16305 IPR001584 Integrase, catalytic core RD05_RS16305 IPR009057 Homeodomain-like RD05_RS16305 IPR012337 Ribonuclease H-like domain RD05_RS16305 IPR024967 DNA-binding domain, IS481-type RD05_RS16310 IPR001584 Integrase, catalytic core RD05_RS16310 IPR009057 Homeodomain-like RD05_RS16310 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16310 IPR012337 Ribonuclease H-like domain RD05_RS16310 IPR024967 DNA-binding domain, IS481-type RD05_RS16315 IPR002299 Porin, Neisseria sp. type RD05_RS16315 IPR023614 Porin domain RD05_RS16320 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related RD05_RS16325 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RD05_RS16325 IPR005835 Nucleotidyl transferase RD05_RS16325 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS16330 IPR001915 Peptidase M48 RD05_RS16330 IPR011990 Tetratricopeptide-like helical domain RD05_RS16330 IPR030873 RD05_RS16330 RD05_RS16335 IPR012020 AB-hydrolase YheT, putative RD05_RS16335 IPR022742 Putative lysophospholipase RD05_RS16335 IPR029058 Alpha/Beta hydrolase fold RD05_RS16340 IPR009959 Polyketide cyclase SnoaL-like domain RD05_RS16340 IPR032710 RD05_RS16340 RD05_RS16345 IPR019401 Zinc finger, CHCC-type RD05_RS16350 IPR001544 Aminotransferase, class IV RD05_RS16350 IPR005785 Branched-chain amino acid aminotransferase I RD05_RS16355 IPR011606 Branched-chain amino acid transport, permease RD05_RS16360 IPR008407 Branched-chain amino acid transport, AzlD RD05_RS16365 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD05_RS16365 IPR001650 Helicase, C-terminal RD05_RS16365 IPR011545 DEAD/DEAH box helicase domain RD05_RS16365 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS16365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16370 IPR012336 Thioredoxin-like fold RD05_RS16370 IPR013766 Thioredoxin domain RD05_RS16380 IPR001584 Integrase, catalytic core RD05_RS16380 IPR009057 Homeodomain-like RD05_RS16380 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16380 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16380 IPR012337 Ribonuclease H-like domain RD05_RS16380 IPR024967 DNA-binding domain, IS481-type RD05_RS16385 IPR001453 Molybdopterin binding domain RD05_RS16390 IPR005471 Transcription regulator IclR, N-terminal RD05_RS16390 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16390 IPR014757 Transcription regulator IclR, C-terminal RD05_RS16390 IPR029016 GAF domain-like RD05_RS16395 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain RD05_RS16395 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD05_RS16400 IPR005064 Bordetella uptake gene RD05_RS16405 IPR010127 Phasin, subfamily 1 RD05_RS16405 IPR018968 Phasin RD05_RS16410 IPR001295 Dihydroorotate dehydrogenase, conserved site RD05_RS16410 IPR005719 Dihydroorotate dehydrogenase, class 2 RD05_RS16410 IPR005720 Dihydroorotate dehydrogenase domain RD05_RS16410 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 RD05_RS16410 IPR013785 Aldolase-type TIM barrel RD05_RS16415 IPR007471 Arginine-tRNA-protein transferase, N-terminal RD05_RS16415 IPR007472 Arginine-tRNA-protein transferase, C-terminal RD05_RS16415 IPR016181 Acyl-CoA N-acyltransferase RD05_RS16415 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic RD05_RS16415 IPR030700 RD05_RS16415 RD05_RS16420 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase RD05_RS16420 IPR016181 Acyl-CoA N-acyltransferase RD05_RS16425 IPR000086 NUDIX hydrolase domain RD05_RS16425 IPR015797 NUDIX hydrolase domain-like RD05_RS16425 IPR020084 NUDIX hydrolase, conserved site RD05_RS16425 IPR029401 Nudix hydrolase, N-terminal RD05_RS16430 IPR000847 Transcription regulator HTH, LysR RD05_RS16430 IPR005119 LysR, substrate-binding RD05_RS16430 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16435 IPR032808 RD05_RS16435 RD05_RS16440 IPR021332 Protein of unknown function DUF2944 RD05_RS16460 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD05_RS16465 IPR001584 Integrase, catalytic core RD05_RS16465 IPR009057 Homeodomain-like RD05_RS16465 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16465 IPR012337 Ribonuclease H-like domain RD05_RS16465 IPR024967 DNA-binding domain, IS481-type RD05_RS16470 IPR000524 Transcription regulator HTH, GntR RD05_RS16470 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS16470 IPR011711 GntR, C-terminal RD05_RS16470 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16475 IPR000399 TPP-binding enzyme, conserved site RD05_RS16475 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS16475 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS16475 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS16475 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS16475 IPR029061 Thiamin diphosphate-binding fold RD05_RS16480 IPR005064 Bordetella uptake gene RD05_RS16485 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD05_RS16490 IPR002505 Phosphate acetyl/butaryl transferase RD05_RS16490 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD05_RS16490 IPR012301 Malic enzyme, N-terminal domain RD05_RS16490 IPR012302 Malic enzyme, NAD-binding RD05_RS16490 IPR016040 NAD(P)-binding domain RD05_RS16495 IPR000847 Transcription regulator HTH, LysR RD05_RS16495 IPR005119 LysR, substrate-binding RD05_RS16495 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16500 IPR000515 MetI-like domain RD05_RS16505 IPR000515 MetI-like domain RD05_RS16510 IPR003439 ABC transporter-like RD05_RS16510 IPR003593 AAA+ ATPase domain RD05_RS16510 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS16510 IPR017871 ABC transporter, conserved site RD05_RS16510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16520 IPR009197 Microcystin LR degradation protein MlrC RD05_RS16520 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD05_RS16520 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD05_RS16525 IPR000847 Transcription regulator HTH, LysR RD05_RS16525 IPR005119 LysR, substrate-binding RD05_RS16525 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16535 IPR013538 Activator of Hsp90 ATPase homologue 1-like RD05_RS16535 IPR023393 START-like domain RD05_RS16540 IPR001845 HTH ArsR-type DNA-binding domain RD05_RS16540 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16545 IPR007844 AsmA RD05_RS16550 IPR005303 MOSC, N-terminal beta barrel RD05_RS16555 IPR004711 Benzoate transporter RD05_RS16560 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS16560 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS16565 IPR001980 Coenzyme A biosynthesis protein RD05_RS16565 IPR004821 Cytidyltransferase-like domain RD05_RS16565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS16570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD05_RS16570 IPR004398 RNA methyltransferase, RsmD RD05_RS16570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS16575 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD05_RS16575 IPR003593 AAA+ ATPase domain RD05_RS16575 IPR004390 Signal-recognition particle receptor FtsY RD05_RS16575 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RD05_RS16575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16580 IPR007899 CHAD RD05_RS16585 IPR023577 CYTH-like domain RD05_RS16585 IPR033469 RD05_RS16585 RD05_RS16590 IPR000515 MetI-like domain RD05_RS16590 IPR005769 ABC transporter, permease PhnE/PtxC RD05_RS16595 IPR000515 MetI-like domain RD05_RS16595 IPR005769 ABC transporter, permease PhnE/PtxC RD05_RS16600 IPR003439 ABC transporter-like RD05_RS16600 IPR017871 ABC transporter, conserved site RD05_RS16600 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16605 IPR001584 Integrase, catalytic core RD05_RS16605 IPR009057 Homeodomain-like RD05_RS16605 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16605 IPR012337 Ribonuclease H-like domain RD05_RS16605 IPR024967 DNA-binding domain, IS481-type RD05_RS16610 IPR003439 ABC transporter-like RD05_RS16610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS16615 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein RD05_RS16620 IPR005471 Transcription regulator IclR, N-terminal RD05_RS16620 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16620 IPR014757 Transcription regulator IclR, C-terminal RD05_RS16620 IPR029016 GAF domain-like RD05_RS16625 IPR006379 HAD-superfamily hydrolase, subfamily IIB RD05_RS16625 IPR023214 HAD-like domain RD05_RS16630 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RD05_RS16630 IPR017945 DHBP synthase RibB-like alpha/beta domain RD05_RS16630 IPR032677 RD05_RS16630 RD05_RS16635 IPR002180 6,7-dimethyl-8-ribityllumazine synthase RD05_RS16640 IPR006027 NusB/RsmB/TIM44 RD05_RS16640 IPR011605 NusB antitermination factor RD05_RS16645 IPR006283 Thiamine-monophosphate kinase RD05_RS16645 IPR010918 AIR synthase-related protein, C-terminal domain RD05_RS16645 IPR016188 PurM, N-terminal-like RD05_RS16650 IPR007686 YutG/PgpA domain RD05_RS16650 IPR026037 Phosphatidylglycerophosphatase A RD05_RS16655 IPR008136 CinA, C-terminal RD05_RS16660 IPR001754 Orotidine 5'-phosphate decarboxylase domain RD05_RS16660 IPR011060 Ribulose-phosphate binding barrel RD05_RS16660 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 RD05_RS16660 IPR013785 Aldolase-type TIM barrel RD05_RS16660 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RD05_RS16665 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS16670 IPR000829 Diacylglycerol kinase, prokaryotic RD05_RS16675 IPR017039 Virulence factor BrkB RD05_RS16680 IPR003991 Pertactin virulence factor family RD05_RS16680 IPR004899 Pertactin, central region RD05_RS16680 IPR005546 Autotransporter beta-domain RD05_RS16680 IPR006315 Outer membrane autotransporter barrel RD05_RS16680 IPR011050 Pectin lyase fold/virulence factor RD05_RS16680 IPR012332 P22 tailspike C-terminal domain-like RD05_RS16685 IPR001844 Chaperonin Cpn60 RD05_RS16685 IPR002423 Chaperonin Cpn60/TCP-1 RD05_RS16685 IPR018370 Chaperonin Cpn60, conserved site RD05_RS16685 IPR027409 GroEL-like apical domain RD05_RS16685 IPR027413 GroEL-like equatorial domain RD05_RS16690 IPR011032 GroES (chaperonin 10)-like RD05_RS16690 IPR018369 Chaperonin Cpn10, conserved site RD05_RS16690 IPR020818 Chaperonin Cpn10 RD05_RS16695 IPR011008 Dimeric alpha-beta barrel RD05_RS16700 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RD05_RS16705 IPR011008 Dimeric alpha-beta barrel RD05_RS16710 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD05_RS16710 IPR003953 FAD binding domain RD05_RS16710 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS16710 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD05_RS16715 IPR005064 Bordetella uptake gene RD05_RS16720 IPR000847 Transcription regulator HTH, LysR RD05_RS16720 IPR005119 LysR, substrate-binding RD05_RS16720 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16725 IPR003953 FAD binding domain RD05_RS16725 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS16725 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD05_RS16730 IPR001584 Integrase, catalytic core RD05_RS16730 IPR009057 Homeodomain-like RD05_RS16730 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16730 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16730 IPR012337 Ribonuclease H-like domain RD05_RS16730 IPR024967 DNA-binding domain, IS481-type RD05_RS16735 IPR001584 Integrase, catalytic core RD05_RS16735 IPR009057 Homeodomain-like RD05_RS16735 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16735 IPR012337 Ribonuclease H-like domain RD05_RS16735 IPR024967 DNA-binding domain, IS481-type RD05_RS16740 IPR000868 Isochorismatase-like RD05_RS16745 IPR000160 GGDEF domain RD05_RS16745 IPR009050 Globin-like RD05_RS16745 IPR012292 Globin, structural domain RD05_RS16745 IPR029787 Nucleotide cyclase RD05_RS16750 IPR003607 HD/PDEase domain RD05_RS16750 IPR006674 HD domain RD05_RS16780 IPR005532 Formylglycine-generating sulphatase enzyme domain RD05_RS16780 IPR016187 C-type lectin fold RD05_RS16780 IPR017806 Ergothioneine biosynthesis protein EgtB RD05_RS16780 IPR024775 DinB-like domain RD05_RS16785 IPR017804 Methyltransferase EgtD-like RD05_RS16785 IPR019257 Histidine-specific methyltransferase, SAM-dependent RD05_RS16785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS16795 IPR001736 Phospholipase D/Transphosphatidylase RD05_RS16795 IPR025202 Phospholipase D-like domain RD05_RS16800 IPR001584 Integrase, catalytic core RD05_RS16800 IPR009057 Homeodomain-like RD05_RS16800 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16800 IPR012337 Ribonuclease H-like domain RD05_RS16800 IPR024967 DNA-binding domain, IS481-type RD05_RS16805 IPR002932 Glutamate synthase domain RD05_RS16805 IPR013785 Aldolase-type TIM barrel RD05_RS16805 IPR024188 Glutamate synthase large subunit-like protein RD05_RS16805 IPR027283 Glutamate synthase large subunit-like protein, bacteria RD05_RS16810 IPR007272 Sulphur transport domain RD05_RS16815 IPR004776 Auxin efflux carrier RD05_RS16820 IPR000182 GNAT domain RD05_RS16820 IPR016181 Acyl-CoA N-acyltransferase RD05_RS16830 IPR005636 DTW RD05_RS16840 IPR003029 Ribosomal protein S1, RNA-binding domain RD05_RS16840 IPR004476 Ribonuclease II/ribonuclease R RD05_RS16840 IPR011129 Cold shock protein RD05_RS16840 IPR011805 Ribonuclease R RD05_RS16840 IPR012340 Nucleic acid-binding, OB-fold RD05_RS16840 IPR013223 Ribonuclease B, N-terminal OB domain RD05_RS16840 IPR022966 Ribonuclease II/R, conserved site RD05_RS16840 IPR022967 RNA-binding domain, S1 RD05_RS16845 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD05_RS16845 IPR004441 RNA methyltransferase TrmH family RD05_RS16845 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RD05_RS16845 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RD05_RS16845 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD05_RS16845 IPR029028 Alpha/beta knot methyltransferases RD05_RS16845 IPR029064 50S ribosomal protein L30e-like RD05_RS16850 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD05_RS16850 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS16850 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS16850 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS16855 IPR005123 Oxoglutarate/iron-dependent dioxygenase RD05_RS16855 IPR006620 Prolyl 4-hydroxylase, alpha subunit RD05_RS16855 IPR023550 PKHD-type hydroxylase RD05_RS16860 IPR000119 Histone-like bacterial DNA-binding protein RD05_RS16860 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD05_RS16860 IPR020816 Histone-like DNA-binding protein, conserved site RD05_RS16870 IPR003538 Gram-negative bacterial TonB protein RD05_RS16870 IPR006260 TonB, C-terminal RD05_RS16875 IPR002898 MotA/TolQ/ExbB proton channel RD05_RS16880 IPR003400 Biopolymer transport protein ExbD/TolR RD05_RS16885 IPR001789 Signal transduction response regulator, receiver domain RD05_RS16885 IPR001867 Signal transduction response regulator, C-terminal RD05_RS16885 IPR011006 CheY-like superfamily RD05_RS16885 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16890 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS16890 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS16890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS16895 IPR003855 K+ potassium transporter RD05_RS16895 IPR023051 Potassium uptake protein, low affinity, Kup RD05_RS16900 IPR001518 Argininosuccinate synthase RD05_RS16900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS16900 IPR018223 Argininosuccinate synthase, conserved site RD05_RS16900 IPR023437 Argininosuccinate synthase, type 2 subfamily RD05_RS16900 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail RD05_RS16900 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RD05_RS16905 IPR002292 Ornithine/putrescine carbamoyltransferase RD05_RS16905 IPR006130 Aspartate/ornithine carbamoyltransferase RD05_RS16905 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD05_RS16905 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD05_RS16905 IPR024904 Ornithine carbamoyltransferase RD05_RS16910 IPR004636 Acetylornithine/Succinylornithine transaminase family RD05_RS16910 IPR005814 Aminotransferase class-III RD05_RS16910 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS16910 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS16910 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS16915 IPR021969 Protein of unknown function DUF3579 RD05_RS16920 IPR000847 Transcription regulator HTH, LysR RD05_RS16920 IPR005119 LysR, substrate-binding RD05_RS16920 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16925 IPR002347 Glucose/ribitol dehydrogenase RD05_RS16925 IPR016040 NAD(P)-binding domain RD05_RS16930 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD05_RS16930 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS16930 IPR016040 NAD(P)-binding domain RD05_RS16930 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD05_RS16935 IPR005064 Bordetella uptake gene RD05_RS16945 IPR002220 DapA-like RD05_RS16945 IPR013785 Aldolase-type TIM barrel RD05_RS16950 IPR000524 Transcription regulator HTH, GntR RD05_RS16950 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS16950 IPR011711 GntR, C-terminal RD05_RS16950 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16955 IPR001584 Integrase, catalytic core RD05_RS16955 IPR010921 Trp repressor/replication initiator RD05_RS16955 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS16955 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16955 IPR012337 Ribonuclease H-like domain RD05_RS16955 IPR024967 DNA-binding domain, IS481-type RD05_RS16960 IPR011701 Major facilitator superfamily RD05_RS16960 IPR020846 Major facilitator superfamily domain RD05_RS16965 IPR003313 AraC-type arabinose-binding/dimerisation domain RD05_RS16965 IPR009057 Homeodomain-like RD05_RS16965 IPR011051 RmlC-like cupin domain RD05_RS16965 IPR014710 RmlC-like jelly roll fold RD05_RS16965 IPR018060 DNA binding HTH domain, AraC-type RD05_RS16965 IPR018062 HTH domain AraC-type, conserved site RD05_RS16965 IPR020449 Transcription regulator HTH, AraC- type RD05_RS16970 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS16970 IPR004674 Alkylhydroperoxidase AhpD RD05_RS16970 IPR004675 Alkylhydroperoxidase AhpD core RD05_RS16970 IPR029032 AhpD-like RD05_RS16975 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD05_RS16975 IPR012336 Thioredoxin-like fold RD05_RS16975 IPR024706 Peroxiredoxin, AhpC-type RD05_RS16980 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS16980 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS16980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS16990 IPR001789 Signal transduction response regulator, receiver domain RD05_RS16990 IPR001867 Signal transduction response regulator, C-terminal RD05_RS16990 IPR011006 CheY-like superfamily RD05_RS16990 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS16990 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS16995 IPR000182 GNAT domain RD05_RS16995 IPR000905 Gcp-like domain RD05_RS16995 IPR006464 Ribosomal-protein-alanine acetyltransferase RD05_RS16995 IPR016181 Acyl-CoA N-acyltransferase RD05_RS16995 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ RD05_RS17000 IPR005122 Uracil-DNA glycosylase-like RD05_RS17000 IPR005273 Uracil-DNA glycosylase, family 4 domain RD05_RS17005 IPR011701 Major facilitator superfamily RD05_RS17005 IPR020846 Major facilitator superfamily domain RD05_RS17010 IPR003395 RecF/RecN/SMC, N-terminal RD05_RS17010 IPR010935 SMCs flexible hinge RD05_RS17010 IPR011890 Structural maintenance of chromosomes protein, prokaryotic RD05_RS17010 IPR024704 Structural maintenance of chromosomes protein RD05_RS17010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17015 IPR007449 ZipA, C-terminal FtsZ-binding domain RD05_RS17020 IPR001357 BRCT domain RD05_RS17020 IPR001679 NAD-dependent DNA ligase RD05_RS17020 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD05_RS17020 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RD05_RS17020 IPR004150 NAD-dependent DNA ligase, OB-fold RD05_RS17020 IPR010994 RuvA domain 2-like RD05_RS17020 IPR012340 Nucleic acid-binding, OB-fold RD05_RS17020 IPR013839 NAD-dependent DNA ligase, adenylation RD05_RS17020 IPR013840 NAD-dependent DNA ligase, N-terminal RD05_RS17020 IPR018239 NAD-dependent DNA ligase, active site RD05_RS17020 IPR033136 RD05_RS17020 RD05_RS17025 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RD05_RS17030 IPR002634 BolA protein RD05_RS17035 IPR006008 Intracellular septation protein A RD05_RS17040 IPR002579 Peptide methionine sulphoxide reductase MrsB RD05_RS17040 IPR011057 Mss4-like RD05_RS17040 IPR028427 Peptide methionine sulfoxide reductase RD05_RS17045 IPR003439 ABC transporter-like RD05_RS17045 IPR003593 AAA+ ATPase domain RD05_RS17045 IPR017871 ABC transporter, conserved site RD05_RS17045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17050 IPR003339 ABC/ECF transporter, transmembrane component RD05_RS17055 IPR003784 BioY protein RD05_RS17060 IPR028081 Leucine-binding protein domain RD05_RS17060 IPR028082 Periplasmic binding protein-like I RD05_RS17065 IPR001851 ABC transporter, permease RD05_RS17070 IPR001851 ABC transporter, permease RD05_RS17070 IPR003439 ABC transporter-like RD05_RS17070 IPR003593 AAA+ ATPase domain RD05_RS17070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17075 IPR001544 Aminotransferase, class IV RD05_RS17080 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RD05_RS17085 IPR001851 ABC transporter, permease RD05_RS17090 IPR001851 ABC transporter, permease RD05_RS17095 IPR028081 Leucine-binding protein domain RD05_RS17095 IPR028082 Periplasmic binding protein-like I RD05_RS17100 IPR003439 ABC transporter-like RD05_RS17100 IPR003593 AAA+ ATPase domain RD05_RS17100 IPR017871 ABC transporter, conserved site RD05_RS17100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17105 IPR003439 ABC transporter-like RD05_RS17105 IPR003593 AAA+ ATPase domain RD05_RS17105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17105 IPR032823 RD05_RS17105 RD05_RS17110 IPR000445 Helix-hairpin-helix motif RD05_RS17110 IPR003265 HhH-GPD domain RD05_RS17110 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RD05_RS17110 IPR004035 Endonuclease III, iron-sulphur binding site RD05_RS17110 IPR004036 Endonuclease III-like, conserved site-2 RD05_RS17110 IPR005759 Endonuclease III RD05_RS17110 IPR011257 DNA glycosylase RD05_RS17110 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD05_RS17115 IPR007202 4Fe-4S domain RD05_RS17115 IPR010207 Electron transport complex, RnfB RD05_RS17115 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS17120 IPR009656 PHB de-polymerase, C-terminal RD05_RS17120 IPR010915 Polyhydroxyalkanoate depolymerase RD05_RS17120 IPR029058 Alpha/Beta hydrolase fold RD05_RS17125 IPR001221 Phenol hydroxylase reductase RD05_RS17125 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS17125 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS17125 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS17130 IPR000813 7Fe ferredoxin RD05_RS17130 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS17130 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS17130 IPR022569 Ferredoxin, C-terminal RD05_RS17135 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RD05_RS17135 IPR006406 Nicotinate phosphoribosyltransferase RD05_RS17135 IPR007229 Nicotinate phosphoribosyltransferase family RD05_RS17140 IPR006175 YjgF/Yer057p/UK114 family RD05_RS17140 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS17140 IPR019897 YjgF-like protein, conserved site RD05_RS17145 IPR005025 NADPH-dependent FMN reductase-like RD05_RS17145 IPR029039 Flavoprotein-like RD05_RS17150 IPR010384 MtfA family RD05_RS17150 IPR024079 Metallopeptidase, catalytic domain RD05_RS17155 IPR002912 ACT domain RD05_RS17155 IPR003607 HD/PDEase domain RD05_RS17155 IPR004095 TGS RD05_RS17155 IPR004811 RelA/SpoT family RD05_RS17155 IPR007685 RelA/SpoT RD05_RS17155 IPR012675 Beta-grasp domain RD05_RS17155 IPR012676 TGS-like RD05_RS17160 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD05_RS17160 IPR002933 Peptidase M20 RD05_RS17160 IPR010169 Acetylornithine deacetylase (ArgE) RD05_RS17160 IPR011650 Peptidase M20, dimerisation domain RD05_RS17165 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS17165 IPR006653 Tryptophan synthase, beta chain, conserved site RD05_RS17165 IPR006654 Tryptophan synthase, beta chain RD05_RS17165 IPR023026 Tryptophan synthase beta chain/beta chain-like RD05_RS17170 IPR002028 Tryptophan synthase, alpha chain RD05_RS17170 IPR011060 Ribulose-phosphate binding barrel RD05_RS17170 IPR013785 Aldolase-type TIM barrel RD05_RS17170 IPR018204 Tryptophan synthase, alpha chain, active site RD05_RS17175 IPR000022 Carboxyl transferase RD05_RS17175 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RD05_RS17175 IPR029045 ClpP/crotonase-like domain RD05_RS17185 IPR001584 Integrase, catalytic core RD05_RS17185 IPR009057 Homeodomain-like RD05_RS17185 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17185 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17185 IPR012337 Ribonuclease H-like domain RD05_RS17185 IPR024967 DNA-binding domain, IS481-type RD05_RS17190 IPR003199 Choloylglycine hydrolase/Peptidase C59 family RD05_RS17190 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS17190 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RD05_RS17195 IPR003029 Ribosomal protein S1, RNA-binding domain RD05_RS17195 IPR004659 Ribonuclease E/G RD05_RS17195 IPR012340 Nucleic acid-binding, OB-fold RD05_RS17195 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RD05_RS17195 IPR022967 RNA-binding domain, S1 RD05_RS17195 IPR028878 Ribonuclease E RD05_RS17200 IPR002942 RNA-binding S4 domain RD05_RS17200 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD05_RS17200 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RD05_RS17200 IPR006225 Pseudouridine synthase, RluC/RluD RD05_RS17200 IPR020103 Pseudouridine synthase, catalytic domain RD05_RS17205 IPR006439 HAD hydrolase, subfamily IA RD05_RS17205 IPR023198 Phosphoglycolate phosphatase, domain 2 RD05_RS17205 IPR023214 HAD-like domain RD05_RS17210 IPR000572 Oxidoreductase, molybdopterin-binding domain RD05_RS17210 IPR022867 Sulphoxide reductase catalytic subunit YedY RD05_RS17215 IPR013130 Ferric reductase transmembrane component-like domain RD05_RS17215 IPR022837 Sulphoxide reductase heme-binding subunit YedZ RD05_RS17220 IPR001584 Integrase, catalytic core RD05_RS17220 IPR009057 Homeodomain-like RD05_RS17220 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17220 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17220 IPR012337 Ribonuclease H-like domain RD05_RS17220 IPR024967 DNA-binding domain, IS481-type RD05_RS17225 IPR003673 CoA-transferase family III RD05_RS17225 IPR023606 CoA-transferase family III domain RD05_RS17230 IPR000847 Transcription regulator HTH, LysR RD05_RS17230 IPR005119 LysR, substrate-binding RD05_RS17230 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17235 IPR002539 MaoC-like domain RD05_RS17235 IPR029069 HotDog domain RD05_RS17240 IPR003673 CoA-transferase family III RD05_RS17240 IPR023606 CoA-transferase family III domain RD05_RS17255 IPR005064 Bordetella uptake gene RD05_RS17260 IPR000847 Transcription regulator HTH, LysR RD05_RS17260 IPR005119 LysR, substrate-binding RD05_RS17260 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17265 IPR006175 YjgF/Yer057p/UK114 family RD05_RS17265 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS17270 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS17270 IPR001221 Phenol hydroxylase reductase RD05_RS17270 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS17270 IPR006656 Molybdopterin oxidoreductase RD05_RS17270 IPR006657 Molydopterin dinucleotide-binding domain RD05_RS17270 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RD05_RS17270 IPR008333 Oxidoreductase, FAD-binding domain RD05_RS17270 IPR009010 Aspartate decarboxylase-like domain RD05_RS17270 IPR012675 Beta-grasp domain RD05_RS17270 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS17275 IPR006160 Short chain fatty acid transporter AtoE RD05_RS17280 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase RD05_RS17280 IPR015590 Aldehyde dehydrogenase domain RD05_RS17280 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS17280 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS17280 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS17280 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS17285 IPR000524 Transcription regulator HTH, GntR RD05_RS17285 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS17285 IPR011711 GntR, C-terminal RD05_RS17285 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17295 IPR002059 Cold-shock protein, DNA-binding RD05_RS17295 IPR011129 Cold shock protein RD05_RS17295 IPR012156 Cold shock, CspA RD05_RS17295 IPR012340 Nucleic acid-binding, OB-fold RD05_RS17295 IPR019844 Cold-shock conserved site RD05_RS17300 IPR000847 Transcription regulator HTH, LysR RD05_RS17300 IPR005119 LysR, substrate-binding RD05_RS17300 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17305 IPR001584 Integrase, catalytic core RD05_RS17305 IPR009057 Homeodomain-like RD05_RS17305 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17305 IPR012337 Ribonuclease H-like domain RD05_RS17305 IPR024967 DNA-binding domain, IS481-type RD05_RS17310 IPR001584 Integrase, catalytic core RD05_RS17310 IPR009057 Homeodomain-like RD05_RS17310 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17310 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17310 IPR012337 Ribonuclease H-like domain RD05_RS17310 IPR024967 DNA-binding domain, IS481-type RD05_RS17320 IPR002155 Thiolase RD05_RS17320 IPR016039 Thiolase-like RD05_RS17320 IPR020616 Thiolase, N-terminal RD05_RS17320 IPR020617 Thiolase, C-terminal RD05_RS17325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS17330 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS17330 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS17330 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS17335 IPR000847 Transcription regulator HTH, LysR RD05_RS17335 IPR005119 LysR, substrate-binding RD05_RS17335 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17340 IPR005064 Bordetella uptake gene RD05_RS17345 IPR001753 Crotonase superfamily RD05_RS17345 IPR029045 ClpP/crotonase-like domain RD05_RS17350 IPR003673 CoA-transferase family III RD05_RS17350 IPR023606 CoA-transferase family III domain RD05_RS17355 IPR005496 Integral membrane protein TerC RD05_RS17360 IPR003416 MgtC/SapB/SrpB transporter RD05_RS17365 IPR000640 Translation elongation factor EFG, V domain RD05_RS17365 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD05_RS17365 IPR004540 Translation elongation factor EFG/EF2 RD05_RS17365 IPR005517 Translation elongation factor EFG/EF2, domain IV RD05_RS17365 IPR009000 Translation protein, beta-barrel domain RD05_RS17365 IPR009022 Elongation factor G, III-V domain RD05_RS17365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS17365 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS17365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17370 IPR000524 Transcription regulator HTH, GntR RD05_RS17370 IPR004839 Aminotransferase, class I/classII RD05_RS17370 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17370 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS17370 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS17370 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS17375 IPR005939 Beta-lactamase hydrolase-like RD05_RS17375 IPR029021 Protein-tyrosine phosphatase-like RD05_RS17380 IPR006015 Universal stress protein A RD05_RS17380 IPR006016 UspA RD05_RS17380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS17385 IPR000795 Elongation factor, GTP-binding domain RD05_RS17385 IPR005225 Small GTP-binding protein domain RD05_RS17385 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17385 IPR031157 RD05_RS17385 RD05_RS17390 IPR001584 Integrase, catalytic core RD05_RS17390 IPR009057 Homeodomain-like RD05_RS17390 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17390 IPR012337 Ribonuclease H-like domain RD05_RS17390 IPR024967 DNA-binding domain, IS481-type RD05_RS17395 IPR001036 Acriflavin resistance protein RD05_RS17395 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS17400 IPR006054 DNA polymerase III, epsilon subunit RD05_RS17400 IPR006309 DNA polymerase 3, epsilon subunit RD05_RS17400 IPR012337 Ribonuclease H-like domain RD05_RS17400 IPR013520 Exonuclease, RNase T/DNA polymerase III RD05_RS17415 IPR006160 Short chain fatty acid transporter AtoE RD05_RS17420 IPR011852 TRAP transporter solute receptor, TAXI family RD05_RS17425 IPR004445 Sodium/glutamate symporter RD05_RS17430 IPR001584 Integrase, catalytic core RD05_RS17430 IPR009057 Homeodomain-like RD05_RS17430 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17430 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17430 IPR012337 Ribonuclease H-like domain RD05_RS17430 IPR024967 DNA-binding domain, IS481-type RD05_RS17435 IPR000182 GNAT domain RD05_RS17435 IPR016181 Acyl-CoA N-acyltransferase RD05_RS17440 IPR001173 Glycosyltransferase 2-like RD05_RS17440 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS17450 IPR002509 Polysaccharide deacetylase RD05_RS17450 IPR006879 Uncharacterised protein family UPF0249/HpnK RD05_RS17450 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS17455 IPR007896 Transmembrane pair, bacterial RD05_RS17460 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS17460 IPR022742 Putative lysophospholipase RD05_RS17460 IPR029058 Alpha/Beta hydrolase fold RD05_RS17465 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD05_RS17470 IPR000620 Drug/metabolite transporter RD05_RS17475 IPR001584 Integrase, catalytic core RD05_RS17475 IPR009057 Homeodomain-like RD05_RS17475 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17475 IPR012337 Ribonuclease H-like domain RD05_RS17475 IPR024967 DNA-binding domain, IS481-type RD05_RS17480 IPR005064 Bordetella uptake gene RD05_RS17485 IPR011051 RmlC-like cupin domain RD05_RS17485 IPR014710 RmlC-like jelly roll fold RD05_RS17490 IPR005064 Bordetella uptake gene RD05_RS17495 IPR001763 Rhodanese-like domain RD05_RS17500 IPR000847 Transcription regulator HTH, LysR RD05_RS17500 IPR005119 LysR, substrate-binding RD05_RS17500 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17505 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS17505 IPR012000 Thiamine pyrophosphate enzyme, central domain RD05_RS17505 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD05_RS17505 IPR029035 DHS-like NAD/FAD-binding domain RD05_RS17505 IPR029061 Thiamin diphosphate-binding fold RD05_RS17510 IPR003673 CoA-transferase family III RD05_RS17510 IPR023606 CoA-transferase family III domain RD05_RS17515 IPR001753 Crotonase superfamily RD05_RS17515 IPR029045 ClpP/crotonase-like domain RD05_RS17520 IPR005064 Bordetella uptake gene RD05_RS17520 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS17525 IPR001584 Integrase, catalytic core RD05_RS17525 IPR009057 Homeodomain-like RD05_RS17525 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17525 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17525 IPR012337 Ribonuclease H-like domain RD05_RS17525 IPR024967 DNA-binding domain, IS481-type RD05_RS17530 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD05_RS17530 IPR005982 Thioredoxin reductase RD05_RS17530 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD05_RS17530 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS17535 IPR005471 Transcription regulator IclR, N-terminal RD05_RS17535 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17535 IPR014757 Transcription regulator IclR, C-terminal RD05_RS17535 IPR029016 GAF domain-like RD05_RS17540 IPR001307 Thiosulphate sulfurtransferase, conserved site RD05_RS17540 IPR001763 Rhodanese-like domain RD05_RS17545 IPR001763 Rhodanese-like domain RD05_RS17550 IPR011051 RmlC-like cupin domain RD05_RS17550 IPR014710 RmlC-like jelly roll fold RD05_RS17555 IPR003673 CoA-transferase family III RD05_RS17555 IPR023606 CoA-transferase family III domain RD05_RS17560 IPR005064 Bordetella uptake gene RD05_RS17565 IPR003673 CoA-transferase family III RD05_RS17565 IPR023606 CoA-transferase family III domain RD05_RS17570 IPR002109 Glutaredoxin RD05_RS17570 IPR012336 Thioredoxin-like fold RD05_RS17580 IPR001584 Integrase, catalytic core RD05_RS17580 IPR009057 Homeodomain-like RD05_RS17580 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17580 IPR012337 Ribonuclease H-like domain RD05_RS17580 IPR024967 DNA-binding domain, IS481-type RD05_RS17585 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RD05_RS17585 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RD05_RS17585 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17585 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RD05_RS17590 IPR000878 Tetrapyrrole methylase RD05_RS17590 IPR008189 rRNA small subunit methyltransferase I RD05_RS17590 IPR014776 Tetrapyrrole methylase, subdomain 2 RD05_RS17590 IPR014777 Tetrapyrrole methylase, subdomain 1 RD05_RS17590 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RD05_RS17595 IPR003509 Uncharacterised protein family UPF0102 RD05_RS17595 IPR011856 tRNA endonuclease-like domain RD05_RS17600 IPR001347 Sugar isomerase (SIS) RD05_RS17600 IPR004515 Phosphoheptose isomerase RD05_RS17605 IPR007055 BON domain RD05_RS17605 IPR014004 Transport-associated and nodulation domain, bacteria RD05_RS17610 IPR012336 Thioredoxin-like fold RD05_RS17610 IPR013740 Redoxin RD05_RS17615 IPR004872 Lipoprotein NlpA family RD05_RS17620 IPR001048 Aspartate/glutamate/uridylate kinase RD05_RS17620 IPR001057 Glutamate/acetylglutamate kinase RD05_RS17620 IPR004662 Acetylglutamate kinase RD05_RS17625 IPR006439 HAD hydrolase, subfamily IA RD05_RS17625 IPR010237 Pyrimidine 5-nucleotidase RD05_RS17625 IPR023214 HAD-like domain RD05_RS17630 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS17630 IPR009057 Homeodomain-like RD05_RS17630 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS17630 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS17635 IPR001898 Sodium/sulphate symporter RD05_RS17635 IPR030676 RD05_RS17635 RD05_RS17640 IPR003767 Malate/L-lactate dehydrogenase RD05_RS17645 IPR001182 Cell cycle protein FtsW/RodA RD05_RS17645 IPR011923 Rod shape-determining protein RodA RD05_RS17645 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RD05_RS17650 IPR001460 Penicillin-binding protein, transpeptidase RD05_RS17650 IPR005311 Penicillin-binding protein, dimerisation domain RD05_RS17650 IPR012338 Beta-lactamase/transpeptidase-like RD05_RS17650 IPR017790 Penicillin-binding protein 2 RD05_RS17655 IPR007227 Cell shape-determining protein MreD RD05_RS17655 IPR026034 Cell shape-determining protein MreD, proteobacterial type RD05_RS17660 IPR007221 Rod shape-determining protein MreC RD05_RS17665 IPR004753 Cell shape determining protein MreB/Mrl RD05_RS17670 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit RD05_RS17675 IPR000120 Amidase RD05_RS17675 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD05_RS17675 IPR020556 Amidase, conserved site RD05_RS17675 IPR023631 Amidase signature domain RD05_RS17680 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RD05_RS17680 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RD05_RS17680 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RD05_RS17680 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RD05_RS17680 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RD05_RS17680 IPR018027 Asn/Gln amidotransferase RD05_RS17680 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RD05_RS17685 IPR000836 Phosphoribosyltransferase domain RD05_RS17685 IPR004467 Orotate phosphoribosyl transferase domain RD05_RS17685 IPR023031 Orotate phosphoribosyltransferase RD05_RS17685 IPR029057 Phosphoribosyltransferase-like RD05_RS17690 IPR004808 AP endonuclease 1 RD05_RS17690 IPR005135 Endonuclease/exonuclease/phosphatase RD05_RS17690 IPR020847 AP endonuclease 1, binding site RD05_RS17695 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RD05_RS17695 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RD05_RS17695 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RD05_RS17695 IPR014362 Glutamate dehydrogenase RD05_RS17695 IPR016040 NAD(P)-binding domain RD05_RS17700 IPR005115 Uncharacterised domain UPF0126 RD05_RS17705 IPR006015 Universal stress protein A RD05_RS17705 IPR006016 UspA RD05_RS17705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS17710 IPR001584 Integrase, catalytic core RD05_RS17710 IPR009057 Homeodomain-like RD05_RS17710 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17710 IPR012337 Ribonuclease H-like domain RD05_RS17710 IPR024967 DNA-binding domain, IS481-type RD05_RS17715 IPR011045 Nitrous oxide reductase, N-terminal RD05_RS17715 IPR015943 WD40/YVTN repeat-like-containing domain RD05_RS17715 IPR019405 Lactonase, 7-bladed beta propeller RD05_RS17720 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS17725 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS17725 IPR001221 Phenol hydroxylase reductase RD05_RS17725 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD05_RS17725 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD05_RS17725 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS17725 IPR008333 Oxidoreductase, FAD-binding domain RD05_RS17725 IPR012675 Beta-grasp domain RD05_RS17725 IPR017938 Riboflavin synthase-like beta-barrel RD05_RS17730 IPR005624 Domain of unknown function DUF336 RD05_RS17735 IPR015590 Aldehyde dehydrogenase domain RD05_RS17735 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS17735 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS17735 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS17735 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS17735 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS17740 IPR016084 Haem oxygenase-like, multi-helical RD05_RS17740 IPR028201 PqqC-like protein RD05_RS17750 IPR002781 Transmembrane protein TauE like RD05_RS17755 IPR000524 Transcription regulator HTH, GntR RD05_RS17755 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS17755 IPR011711 GntR, C-terminal RD05_RS17755 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17760 IPR001584 Integrase, catalytic core RD05_RS17760 IPR009057 Homeodomain-like RD05_RS17760 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17760 IPR012337 Ribonuclease H-like domain RD05_RS17760 IPR024967 DNA-binding domain, IS481-type RD05_RS17765 IPR003462 Ornithine cyclodeaminase/mu-crystallin RD05_RS17765 IPR016040 NAD(P)-binding domain RD05_RS17765 IPR023401 Ornithine cyclodeaminase, N-terminal RD05_RS17770 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS17770 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS17770 IPR012675 Beta-grasp domain RD05_RS17780 IPR001041 2Fe-2S ferredoxin-type domain RD05_RS17780 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD05_RS17780 IPR012675 Beta-grasp domain RD05_RS17790 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS17790 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17790 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD05_RS17790 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS17790 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS17790 IPR014284 RNA polymerase sigma-70 like domain RD05_RS17795 IPR006860 FecR protein RD05_RS17795 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD05_RS17795 IPR032623 RD05_RS17795 RD05_RS17800 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS17800 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RD05_RS17800 IPR011276 TonB-dependent haem/haemoglobin receptor RD05_RS17800 IPR011662 Secretin/TonB, short N-terminal RD05_RS17800 IPR012910 TonB-dependent receptor, plug RD05_RS17805 IPR007845 Haemin-degrading HemS/ChuX domain RD05_RS17810 IPR002491 ABC transporter periplasmic binding domain RD05_RS17815 IPR000522 ABC transporter, permease protein RD05_RS17815 IPR029022 ABC transporter, BtuC-like RD05_RS17820 IPR003439 ABC transporter-like RD05_RS17820 IPR003593 AAA+ ATPase domain RD05_RS17820 IPR017871 ABC transporter, conserved site RD05_RS17820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS17825 IPR007553 Domain of unknown function DUF523 RD05_RS17830 IPR018655 Protein of unknown function DUF2086 RD05_RS17835 IPR004574 Alkylated DNA repair protein AlkB RD05_RS17835 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RD05_RS17840 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RD05_RS17840 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RD05_RS17840 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS17840 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RD05_RS17845 IPR000160 GGDEF domain RD05_RS17845 IPR029787 Nucleotide cyclase RD05_RS17850 IPR021556 Protein of unknown function DUF2950 RD05_RS17855 IPR021728 Protein of unknown function DUF3300 RD05_RS17860 IPR005119 LysR, substrate-binding RD05_RS17870 IPR005064 Bordetella uptake gene RD05_RS17875 IPR001279 Beta-lactamase-like RD05_RS17880 IPR002155 Thiolase RD05_RS17880 IPR016039 Thiolase-like RD05_RS17885 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD05_RS17885 IPR012340 Nucleic acid-binding, OB-fold RD05_RS17885 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD05_RS17890 IPR005064 Bordetella uptake gene RD05_RS17895 IPR000873 AMP-dependent synthetase/ligase RD05_RS17895 IPR020845 AMP-binding, conserved site RD05_RS17895 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS17900 IPR011008 Dimeric alpha-beta barrel RD05_RS17905 IPR001584 Integrase, catalytic core RD05_RS17905 IPR009057 Homeodomain-like RD05_RS17905 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS17905 IPR012337 Ribonuclease H-like domain RD05_RS17905 IPR024967 DNA-binding domain, IS481-type RD05_RS17910 IPR001264 Glycosyl transferase, family 51 RD05_RS17910 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase RD05_RS17910 IPR023346 Lysozyme-like domain RD05_RS17915 IPR005495 Permease YjgP/YjgQ, predicted RD05_RS17915 IPR030923 RD05_RS17915 RD05_RS17920 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) RD05_RS17920 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD05_RS17920 IPR029052 Metallo-dependent phosphatase-like RD05_RS17925 IPR002123 Phospholipid/glycerol acyltransferase RD05_RS17930 IPR006680 Amidohydrolase 1 RD05_RS17930 IPR011059 Metal-dependent hydrolase, composite domain RD05_RS17930 IPR032466 RD05_RS17930 RD05_RS17935 IPR002082 Aspartate carbamoyltransferase RD05_RS17935 IPR006130 Aspartate/ornithine carbamoyltransferase RD05_RS17935 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD05_RS17935 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD05_RS17940 IPR005227 Resolvase, holliday junction-type, YqgF-like RD05_RS17940 IPR006641 YqgF/RNase H-like domain RD05_RS17940 IPR012337 Ribonuclease H-like domain RD05_RS17945 IPR003774 Protein of unknown function UPF0301 RD05_RS17950 IPR004039 Rubredoxin-type fold RD05_RS17950 IPR018527 Rubredoxin, iron-binding site RD05_RS17950 IPR024922 Rubredoxin RD05_RS17950 IPR024935 Rubredoxin domain RD05_RS17955 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD05_RS17955 IPR029056 Ribokinase-like RD05_RS17960 IPR003733 Thiamine phosphate synthase RD05_RS17960 IPR013785 Aldolase-type TIM barrel RD05_RS17960 IPR022998 Thiamin phosphate synthase superfamily RD05_RS17965 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RD05_RS17965 IPR005814 Aminotransferase class-III RD05_RS17965 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS17965 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS17965 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS17970 IPR005646 Protein of unknown function DUF342 RD05_RS17975 IPR006175 YjgF/Yer057p/UK114 family RD05_RS17975 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD05_RS17980 IPR029069 HotDog domain RD05_RS17985 IPR000873 AMP-dependent synthetase/ligase RD05_RS17985 IPR020845 AMP-binding, conserved site RD05_RS17985 IPR025110 AMP-binding enzyme C-terminal domain RD05_RS17990 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS17990 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD05_RS17990 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS17990 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD05_RS17990 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD05_RS17995 IPR001753 Crotonase superfamily RD05_RS17995 IPR014748 Crontonase, C-terminal RD05_RS17995 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS17995 IPR029045 ClpP/crotonase-like domain RD05_RS18010 IPR003439 ABC transporter-like RD05_RS18010 IPR003593 AAA+ ATPase domain RD05_RS18010 IPR017871 ABC transporter, conserved site RD05_RS18010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18015 IPR003439 ABC transporter-like RD05_RS18015 IPR003593 AAA+ ATPase domain RD05_RS18015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18015 IPR032823 RD05_RS18015 RD05_RS18020 IPR001851 ABC transporter, permease RD05_RS18025 IPR001851 ABC transporter, permease RD05_RS18030 IPR028081 Leucine-binding protein domain RD05_RS18030 IPR028082 Periplasmic binding protein-like I RD05_RS18035 IPR013094 Alpha/beta hydrolase fold-3 RD05_RS18035 IPR029058 Alpha/Beta hydrolase fold RD05_RS18040 IPR000835 MarR-type HTH domain RD05_RS18040 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18040 IPR023187 Transcriptional regulator MarR-type, conserved site RD05_RS18050 IPR001584 Integrase, catalytic core RD05_RS18050 IPR009057 Homeodomain-like RD05_RS18050 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18050 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18050 IPR012337 Ribonuclease H-like domain RD05_RS18050 IPR024967 DNA-binding domain, IS481-type RD05_RS18065 IPR010708 5'(3')-deoxyribonucleotidase RD05_RS18065 IPR023214 HAD-like domain RD05_RS18075 IPR000847 Transcription regulator HTH, LysR RD05_RS18075 IPR005119 LysR, substrate-binding RD05_RS18075 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18080 IPR011701 Major facilitator superfamily RD05_RS18080 IPR020846 Major facilitator superfamily domain RD05_RS18085 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RD05_RS18085 IPR004404 Dihydroxy-acid dehydratase RD05_RS18085 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD05_RS18085 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RD05_RS18090 IPR003313 AraC-type arabinose-binding/dimerisation domain RD05_RS18090 IPR009057 Homeodomain-like RD05_RS18090 IPR011051 RmlC-like cupin domain RD05_RS18090 IPR014710 RmlC-like jelly roll fold RD05_RS18090 IPR018060 DNA binding HTH domain, AraC-type RD05_RS18090 IPR020449 Transcription regulator HTH, AraC- type RD05_RS18095 IPR000891 Pyruvate carboxyltransferase RD05_RS18095 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RD05_RS18095 IPR013785 Aldolase-type TIM barrel RD05_RS18100 IPR003313 AraC-type arabinose-binding/dimerisation domain RD05_RS18100 IPR009057 Homeodomain-like RD05_RS18100 IPR011051 RmlC-like cupin domain RD05_RS18100 IPR014710 RmlC-like jelly roll fold RD05_RS18100 IPR018060 DNA binding HTH domain, AraC-type RD05_RS18100 IPR020449 Transcription regulator HTH, AraC- type RD05_RS18105 IPR002168 Lipase, GDXG, active site RD05_RS18105 IPR013094 Alpha/beta hydrolase fold-3 RD05_RS18105 IPR029058 Alpha/Beta hydrolase fold RD05_RS18110 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS18110 IPR030678 RD05_RS18110 RD05_RS18115 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS18115 IPR016040 NAD(P)-binding domain RD05_RS18120 IPR007396 Transcriptional regulator PAI 2-type RD05_RS18120 IPR012349 FMN-binding split barrel RD05_RS18125 IPR001584 Integrase, catalytic core RD05_RS18125 IPR009057 Homeodomain-like RD05_RS18125 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18125 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18125 IPR012337 Ribonuclease H-like domain RD05_RS18125 IPR024967 DNA-binding domain, IS481-type RD05_RS18130 IPR001478 PDZ domain RD05_RS18130 IPR001940 Peptidase S1C RD05_RS18130 IPR009003 Trypsin-like cysteine/serine peptidase domain RD05_RS18135 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RD05_RS18140 IPR001185 Large-conductance mechanosensitive channel RD05_RS18145 IPR005805 Rieske iron-sulphur protein, C-terminal RD05_RS18145 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit RD05_RS18145 IPR014349 Rieske iron-sulphur protein RD05_RS18145 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD05_RS18150 IPR005798 Cytochrome b/b6, C-terminal RD05_RS18150 IPR016174 Di-haem cytochrome, transmembrane RD05_RS18150 IPR027387 Cytochrome b/b6-like domain RD05_RS18155 IPR002326 Cytochrome c1 RD05_RS18155 IPR009056 Cytochrome c-like domain RD05_RS18160 IPR004045 Glutathione S-transferase, N-terminal RD05_RS18160 IPR010987 Glutathione S-transferase, C-terminal-like RD05_RS18160 IPR012336 Thioredoxin-like fold RD05_RS18165 IPR007481 Stringent starvation protein B RD05_RS18175 IPR013762 Integrase-like, catalytic core RD05_RS18180 IPR025319 Domain of unknown function DUF4224 RD05_RS18185 IPR001584 Integrase, catalytic core RD05_RS18185 IPR009057 Homeodomain-like RD05_RS18185 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18185 IPR012337 Ribonuclease H-like domain RD05_RS18185 IPR024967 DNA-binding domain, IS481-type RD05_RS18190 IPR002299 Porin, Neisseria sp. type RD05_RS18190 IPR023614 Porin domain RD05_RS18195 IPR025421 Protein of unknown function DUF4148 RD05_RS18205 IPR000836 Phosphoribosyltransferase domain RD05_RS18205 IPR005764 Adenine phosphoribosyl transferase RD05_RS18205 IPR029057 Phosphoribosyltransferase-like RD05_RS18210 IPR003439 ABC transporter-like RD05_RS18210 IPR003593 AAA+ ATPase domain RD05_RS18210 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS18210 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC RD05_RS18210 IPR017871 ABC transporter, conserved site RD05_RS18210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18215 IPR003439 ABC transporter-like RD05_RS18215 IPR003593 AAA+ ATPase domain RD05_RS18215 IPR011527 ABC transporter type 1, transmembrane domain RD05_RS18215 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RD05_RS18215 IPR017871 ABC transporter, conserved site RD05_RS18215 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18220 IPR011724 Cyd operon protein YbgT RD05_RS18220 IPR012994 Membrane bound YbgT-like RD05_RS18225 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RD05_RS18230 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RD05_RS18235 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18235 IPR026282 DNA-binding protein, MJ1563 type RD05_RS18240 IPR000531 TonB-dependent receptor, beta-barrel RD05_RS18240 IPR010917 TonB-dependent receptor, conserved site RD05_RS18245 IPR001584 Integrase, catalytic core RD05_RS18245 IPR009057 Homeodomain-like RD05_RS18245 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18245 IPR012337 Ribonuclease H-like domain RD05_RS18245 IPR024967 DNA-binding domain, IS481-type RD05_RS18250 IPR006089 Acyl-CoA dehydrogenase, conserved site RD05_RS18250 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD05_RS18255 IPR005064 Bordetella uptake gene RD05_RS18260 IPR003673 CoA-transferase family III RD05_RS18260 IPR023606 CoA-transferase family III domain RD05_RS18265 IPR000101 Gamma-glutamyltranspeptidase RD05_RS18265 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS18270 IPR000847 Transcription regulator HTH, LysR RD05_RS18270 IPR005119 LysR, substrate-binding RD05_RS18270 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18275 IPR005064 Bordetella uptake gene RD05_RS18280 IPR004776 Auxin efflux carrier RD05_RS18285 IPR000362 Fumarate lyase family RD05_RS18285 IPR005677 Fumarate hydratase, class II RD05_RS18285 IPR008948 L-Aspartase-like RD05_RS18285 IPR018951 Fumarase C, C-terminal RD05_RS18285 IPR020557 Fumarate lyase, conserved site RD05_RS18285 IPR022761 Fumarate lyase, N-terminal RD05_RS18285 IPR024083 Fumarase/histidase, N-terminal RD05_RS18290 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RD05_RS18290 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18295 IPR002508 Cell wall hydrolase/autolysin, catalytic RD05_RS18295 IPR021731 AMIN domain RD05_RS18300 IPR032816 RD05_RS18300 RD05_RS18300 IPR032818 RD05_RS18300 RD05_RS18305 IPR002099 DNA mismatch repair protein family RD05_RS18305 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS18305 IPR013507 DNA mismatch repair protein, C-terminal RD05_RS18305 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD05_RS18305 IPR014762 DNA mismatch repair, conserved site RD05_RS18305 IPR014790 MutL, C-terminal, dimerisation RD05_RS18305 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS18305 IPR020667 DNA mismatch repair protein, MutL RD05_RS18310 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase RD05_RS18310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18315 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RD05_RS18315 IPR010918 AIR synthase-related protein, C-terminal domain RD05_RS18315 IPR016188 PurM, N-terminal-like RD05_RS18320 IPR003593 AAA+ ATPase domain RD05_RS18320 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RD05_RS18320 IPR017788 DnaA regulatory inactivator Hda RD05_RS18320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18325 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like RD05_RS18325 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RD05_RS18325 IPR023214 HAD-like domain RD05_RS18330 IPR002646 Poly A polymerase, head domain RD05_RS18330 IPR010206 Poly(A) polymerase I RD05_RS18330 IPR025866 Polymerase A arginine-rich C-terminal domain RD05_RS18330 IPR032828 RD05_RS18330 RD05_RS18335 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RD05_RS18340 IPR005064 Bordetella uptake gene RD05_RS18350 IPR004681 TRAP transporter permease protein RD05_RS18350 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD05_RS18350 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD05_RS18355 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD05_RS18360 IPR000524 Transcription regulator HTH, GntR RD05_RS18360 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS18360 IPR011711 GntR, C-terminal RD05_RS18360 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18365 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD05_RS18365 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS18365 IPR013328 Dehydrogenase, multihelical RD05_RS18365 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD05_RS18365 IPR016040 NAD(P)-binding domain RD05_RS18365 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD05_RS18370 IPR003779 Carboxymuconolactone decarboxylase-like RD05_RS18370 IPR029032 AhpD-like RD05_RS18380 IPR002347 Glucose/ribitol dehydrogenase RD05_RS18380 IPR016040 NAD(P)-binding domain RD05_RS18380 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS18385 IPR001584 Integrase, catalytic core RD05_RS18385 IPR009057 Homeodomain-like RD05_RS18385 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18385 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18385 IPR012337 Ribonuclease H-like domain RD05_RS18385 IPR024967 DNA-binding domain, IS481-type RD05_RS18390 IPR001584 Integrase, catalytic core RD05_RS18390 IPR009057 Homeodomain-like RD05_RS18390 IPR012337 Ribonuclease H-like domain RD05_RS18390 IPR024967 DNA-binding domain, IS481-type RD05_RS18395 IPR001584 Integrase, catalytic core RD05_RS18395 IPR009057 Homeodomain-like RD05_RS18395 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18395 IPR012337 Ribonuclease H-like domain RD05_RS18395 IPR024967 DNA-binding domain, IS481-type RD05_RS18400 IPR019043 Restriction endonuclease, type II, HindIII RD05_RS18410 IPR002817 Thiamine biosynthesis protein ThiC RD05_RS18410 IPR025747 ThiC-associated domain RD05_RS18415 IPR015590 Aldehyde dehydrogenase domain RD05_RS18415 IPR016160 Aldehyde dehydrogenase, cysteine active site RD05_RS18415 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS18415 IPR016162 Aldehyde dehydrogenase, N-terminal RD05_RS18415 IPR016163 Aldehyde dehydrogenase, C-terminal RD05_RS18415 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD05_RS18420 IPR004113 FAD-linked oxidase, C-terminal RD05_RS18420 IPR006094 FAD linked oxidase, N-terminal RD05_RS18420 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS18420 IPR016166 FAD-binding, type 2 RD05_RS18420 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS18420 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD05_RS18420 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD05_RS18425 IPR000524 Transcription regulator HTH, GntR RD05_RS18425 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS18425 IPR011711 GntR, C-terminal RD05_RS18425 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18430 IPR001584 Integrase, catalytic core RD05_RS18430 IPR009057 Homeodomain-like RD05_RS18430 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18430 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18430 IPR012337 Ribonuclease H-like domain RD05_RS18430 IPR024967 DNA-binding domain, IS481-type RD05_RS18435 IPR011042 Six-bladed beta-propeller, TolB-like RD05_RS18435 IPR011217 Streptogramin lyase RD05_RS18440 IPR016181 Acyl-CoA N-acyltransferase RD05_RS18445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS18445 IPR018317 Queuosine biosynthesis protein QueC RD05_RS18450 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD05_RS18450 IPR018129 Phosphoenolpyruvate carboxylase, active site RD05_RS18450 IPR021135 Phosphoenolpyruvate carboxylase RD05_RS18450 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type RD05_RS18450 IPR033129 RD05_RS18450 RD05_RS18455 IPR000209 Peptidase S8/S53 domain RD05_RS18455 IPR005546 Autotransporter beta-domain RD05_RS18455 IPR012332 P22 tailspike C-terminal domain-like RD05_RS18455 IPR013425 Autotransporter-associated beta strand repeat RD05_RS18455 IPR015500 Peptidase S8, subtilisin-related RD05_RS18455 IPR023828 Peptidase S8, subtilisin, Ser-active site RD05_RS18460 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD05_RS18460 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD05_RS18460 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS18460 IPR013328 Dehydrogenase, multihelical RD05_RS18460 IPR016040 NAD(P)-binding domain RD05_RS18460 IPR022694 3-hydroxyacyl-CoA dehydrogenase RD05_RS18465 IPR006160 Short chain fatty acid transporter AtoE RD05_RS18470 IPR002347 Glucose/ribitol dehydrogenase RD05_RS18470 IPR016040 NAD(P)-binding domain RD05_RS18470 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD05_RS18475 IPR005471 Transcription regulator IclR, N-terminal RD05_RS18475 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18475 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RD05_RS18475 IPR014757 Transcription regulator IclR, C-terminal RD05_RS18475 IPR029016 GAF domain-like RD05_RS18480 IPR004163 Coenzyme A transferase binding site RD05_RS18480 IPR004165 Coenzyme A transferase family I RD05_RS18480 IPR012792 3-oxoacid CoA-transferase, subunit A RD05_RS18485 IPR004165 Coenzyme A transferase family I RD05_RS18485 IPR012791 3-oxoacid CoA-transferase, subunit B RD05_RS18490 IPR003464 Muconolactone delta-isomerase RD05_RS18490 IPR011008 Dimeric alpha-beta barrel RD05_RS18490 IPR026029 Muconolactone isomerase domain RD05_RS18495 IPR005545 YCII-related RD05_RS18495 IPR011008 Dimeric alpha-beta barrel RD05_RS18500 IPR000073 Alpha/beta hydrolase fold-1 RD05_RS18500 IPR026968 3-oxoadipate enol-lactonase 1/2 RD05_RS18500 IPR029058 Alpha/Beta hydrolase fold RD05_RS18505 IPR007325 Kynurenine formamidase RD05_RS18510 IPR011690 Phosphate-starvation-induced PsiF repeat RD05_RS18515 IPR001584 Integrase, catalytic core RD05_RS18515 IPR009057 Homeodomain-like RD05_RS18515 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18515 IPR012337 Ribonuclease H-like domain RD05_RS18515 IPR024967 DNA-binding domain, IS481-type RD05_RS18520 IPR001753 Crotonase superfamily RD05_RS18520 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS18520 IPR029045 ClpP/crotonase-like domain RD05_RS18525 IPR005064 Bordetella uptake gene RD05_RS18530 IPR003673 CoA-transferase family III RD05_RS18530 IPR023606 CoA-transferase family III domain RD05_RS18535 IPR000524 Transcription regulator HTH, GntR RD05_RS18535 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS18535 IPR011711 GntR, C-terminal RD05_RS18535 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18540 IPR003437 Glycine cleavage system P protein, homodimeric RD05_RS18540 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS18540 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS18540 IPR020580 Glycine cleavage system P-protein, N-terminal RD05_RS18540 IPR020581 Glycine cleavage system P protein RD05_RS18545 IPR002930 Glycine cleavage system H-protein RD05_RS18545 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD05_RS18545 IPR011053 Single hybrid motif RD05_RS18545 IPR017453 Glycine cleavage system H-protein, subgroup RD05_RS18550 IPR006222 Glycine cleavage T-protein, N-terminal RD05_RS18550 IPR006223 Glycine cleavage system T protein RD05_RS18550 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RD05_RS18550 IPR022903 Glycine cleavage system T protein, bacteria RD05_RS18550 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD05_RS18550 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA RD05_RS18550 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RD05_RS18555 IPR003689 Zinc/iron permease RD05_RS18560 IPR001189 Manganese/iron superoxide dismutase RD05_RS18560 IPR019831 Manganese/iron superoxide dismutase, N-terminal RD05_RS18560 IPR019832 Manganese/iron superoxide dismutase, C-terminal RD05_RS18560 IPR019833 Manganese/iron superoxide dismutase, binding site RD05_RS18565 IPR001584 Integrase, catalytic core RD05_RS18565 IPR009057 Homeodomain-like RD05_RS18565 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18565 IPR012337 Ribonuclease H-like domain RD05_RS18565 IPR024967 DNA-binding domain, IS481-type RD05_RS18570 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RD05_RS18570 IPR023166 HI0933 insert-like domain RD05_RS18570 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS18575 IPR000310 Orn/Lys/Arg decarboxylase, major domain RD05_RS18575 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal RD05_RS18575 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal RD05_RS18575 IPR011193 Ornithine/lysine/arginine decarboxylase RD05_RS18575 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS18575 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS18575 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS18585 IPR000182 GNAT domain RD05_RS18585 IPR016181 Acyl-CoA N-acyltransferase RD05_RS18590 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS18590 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS18595 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS18595 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS18600 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RD05_RS18600 IPR011962 Deoxycytidine triphosphate deaminase RD05_RS18600 IPR029054 dUTPase-like RD05_RS18610 IPR000184 Bacterial surface antigen (D15) RD05_RS18615 IPR000808 Mrp, conserved site RD05_RS18615 IPR002744 Domain of unknown function DUF59 RD05_RS18615 IPR019591 Mrp/NBP35 ATP-binding protein RD05_RS18615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18625 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD05_RS18625 IPR002547 tRNA-binding domain RD05_RS18625 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal RD05_RS18625 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD05_RS18625 IPR012340 Nucleic acid-binding, OB-fold RD05_RS18625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS18625 IPR014758 Methionyl-tRNA synthetase RD05_RS18625 IPR015413 Methionyl/Leucyl tRNA synthetase RD05_RS18625 IPR023458 Methionine-tRNA ligase, type 1 RD05_RS18625 IPR029038 Methionyl-tRNA synthetase, Zn-domain RD05_RS18630 IPR001763 Rhodanese-like domain RD05_RS18630 IPR020936 Uncharacterised protein family UPF0176 RD05_RS18635 IPR005184 Domain of unknown function DUF306, Meta/HslJ RD05_RS18635 IPR025485 Domain of unknown function DUF4377 RD05_RS18640 IPR005184 Domain of unknown function DUF306, Meta/HslJ RD05_RS18650 IPR001584 Integrase, catalytic core RD05_RS18650 IPR009057 Homeodomain-like RD05_RS18650 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18650 IPR012337 Ribonuclease H-like domain RD05_RS18650 IPR024967 DNA-binding domain, IS481-type RD05_RS18655 IPR002024 Bacterioferritin RD05_RS18655 IPR008331 Ferritin/DPS protein domain RD05_RS18655 IPR009078 Ferritin-like superfamily RD05_RS18655 IPR012347 Ferritin-related RD05_RS18665 IPR000795 Elongation factor, GTP-binding domain RD05_RS18665 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD05_RS18665 IPR004548 Peptide chain release factor 3 RD05_RS18665 IPR005225 Small GTP-binding protein domain RD05_RS18665 IPR009000 Translation protein, beta-barrel domain RD05_RS18665 IPR009022 Elongation factor G, III-V domain RD05_RS18665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18665 IPR031157 RD05_RS18665 RD05_RS18665 IPR032090 RD05_RS18665 RD05_RS18670 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD05_RS18675 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD05_RS18675 IPR001650 Helicase, C-terminal RD05_RS18675 IPR011545 DEAD/DEAH box helicase domain RD05_RS18675 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD05_RS18675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18675 IPR028622 ATP-dependent RNA helicase RhlE RD05_RS18680 IPR007156 LemA RD05_RS18680 IPR023353 LemA-like domain RD05_RS18685 IPR007621 TPM domain RD05_RS18690 IPR003439 ABC transporter-like RD05_RS18690 IPR003593 AAA+ ATPase domain RD05_RS18690 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS18690 IPR017871 ABC transporter, conserved site RD05_RS18690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18695 IPR001584 Integrase, catalytic core RD05_RS18695 IPR009057 Homeodomain-like RD05_RS18695 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18695 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18695 IPR012337 Ribonuclease H-like domain RD05_RS18695 IPR024967 DNA-binding domain, IS481-type RD05_RS18700 IPR009078 Ferritin-like superfamily RD05_RS18700 IPR012348 Ribonucleotide reductase-related RD05_RS18705 IPR004147 UbiB domain RD05_RS18705 IPR010232 Probable protein kinase UbiB RD05_RS18705 IPR011009 Protein kinase-like domain RD05_RS18710 IPR003033 SCP2 sterol-binding domain RD05_RS18715 IPR007379 Tim44-like domain RD05_RS18715 IPR032710 RD05_RS18715 RD05_RS18720 IPR004033 UbiE/COQ5 methyltransferase RD05_RS18720 IPR023576 UbiE/COQ5 methyltransferase, conserved site RD05_RS18720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS18725 IPR001789 Signal transduction response regulator, receiver domain RD05_RS18725 IPR001867 Signal transduction response regulator, C-terminal RD05_RS18725 IPR011006 CheY-like superfamily RD05_RS18725 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB RD05_RS18725 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18725 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS18730 IPR000014 PAS domain RD05_RS18730 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS18730 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS18730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS18730 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR RD05_RS18730 IPR021766 Protein of unknown function DUF3329 RD05_RS18735 IPR001789 Signal transduction response regulator, receiver domain RD05_RS18735 IPR001867 Signal transduction response regulator, C-terminal RD05_RS18735 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response RD05_RS18735 IPR011006 CheY-like superfamily RD05_RS18735 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18740 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS18740 IPR003660 HAMP linker domain RD05_RS18740 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS18740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS18740 IPR006290 Heavy metal sensor kinase RD05_RS18745 IPR007332 Protein of unknown function DUF411 RD05_RS18750 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD05_RS18750 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD05_RS18750 IPR016040 NAD(P)-binding domain RD05_RS18750 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 RD05_RS18750 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD05_RS18750 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD05_RS18755 IPR000847 Transcription regulator HTH, LysR RD05_RS18755 IPR005119 LysR, substrate-binding RD05_RS18755 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18760 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD05_RS18760 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD05_RS18765 IPR003833 Allophanate hydrolase subunit 1 RD05_RS18765 IPR010016 Sensor histidine kinase inhibitor, KipI family RD05_RS18765 IPR024946 Arginine repressor C-terminal-like domain RD05_RS18765 IPR029000 Cyclophilin-like domain RD05_RS18770 IPR003778 Allophanate hydrolase subunit 2 RD05_RS18770 IPR029000 Cyclophilin-like domain RD05_RS18775 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RD05_RS18775 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD05_RS18780 IPR005471 Transcription regulator IclR, N-terminal RD05_RS18780 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18780 IPR014757 Transcription regulator IclR, C-terminal RD05_RS18780 IPR029016 GAF domain-like RD05_RS18785 IPR005064 Bordetella uptake gene RD05_RS18790 IPR002938 Monooxygenase, FAD-binding RD05_RS18790 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS18795 IPR002938 Monooxygenase, FAD-binding RD05_RS18795 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS18800 IPR001753 Crotonase superfamily RD05_RS18800 IPR029045 ClpP/crotonase-like domain RD05_RS18805 IPR002168 Lipase, GDXG, active site RD05_RS18805 IPR013094 Alpha/beta hydrolase fold-3 RD05_RS18805 IPR029058 Alpha/Beta hydrolase fold RD05_RS18810 IPR003673 CoA-transferase family III RD05_RS18810 IPR023606 CoA-transferase family III domain RD05_RS18815 IPR000524 Transcription regulator HTH, GntR RD05_RS18815 IPR008920 Transcription regulator FadR/GntR, C-terminal RD05_RS18815 IPR011711 GntR, C-terminal RD05_RS18815 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18820 IPR004017 Cysteine-rich domain RD05_RS18820 IPR004113 FAD-linked oxidase, C-terminal RD05_RS18820 IPR006094 FAD linked oxidase, N-terminal RD05_RS18820 IPR009051 Alpha-helical ferredoxin RD05_RS18820 IPR016164 FAD-linked oxidase-like, C-terminal RD05_RS18820 IPR016166 FAD-binding, type 2 RD05_RS18820 IPR016167 FAD-binding, type 2, subdomain 1 RD05_RS18820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD05_RS18820 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD05_RS18820 IPR021817 Protein of unknown function DUF3400 RD05_RS18820 IPR022153 Protein of unknown function DUF3683 RD05_RS18830 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RD05_RS18830 IPR001721 ACT-like domain RD05_RS18830 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD05_RS18830 IPR005787 Threonine dehydratase, biosynthetic RD05_RS18835 IPR023614 Porin domain RD05_RS18840 IPR001584 Integrase, catalytic core RD05_RS18840 IPR009057 Homeodomain-like RD05_RS18840 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18840 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18840 IPR012337 Ribonuclease H-like domain RD05_RS18840 IPR024967 DNA-binding domain, IS481-type RD05_RS18850 IPR000847 Transcription regulator HTH, LysR RD05_RS18850 IPR005119 LysR, substrate-binding RD05_RS18850 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18855 IPR007419 BFD-like [2Fe-2S]-binding domain RD05_RS18860 IPR000394 RNA polymerase sigma factor 54 RD05_RS18860 IPR007046 RNA polymerase sigma factor 54, core-binding RD05_RS18860 IPR007634 RNA polymerase sigma factor 54, DNA-binding RD05_RS18870 IPR000891 Pyruvate carboxyltransferase RD05_RS18870 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RD05_RS18870 IPR005668 2-isopropylmalate synthase RD05_RS18870 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RD05_RS18870 IPR013785 Aldolase-type TIM barrel RD05_RS18875 IPR000120 Amidase RD05_RS18875 IPR023631 Amidase signature domain RD05_RS18885 IPR028082 Periplasmic binding protein-like I RD05_RS18900 IPR000515 MetI-like domain RD05_RS18905 IPR003439 ABC transporter-like RD05_RS18905 IPR003593 AAA+ ATPase domain RD05_RS18905 IPR017871 ABC transporter, conserved site RD05_RS18905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS18910 IPR001584 Integrase, catalytic core RD05_RS18910 IPR009057 Homeodomain-like RD05_RS18910 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS18910 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS18910 IPR012337 Ribonuclease H-like domain RD05_RS18910 IPR024967 DNA-binding domain, IS481-type RD05_RS18915 IPR001296 Glycosyl transferase, family 1 RD05_RS18915 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD05_RS18920 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD05_RS18920 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD05_RS18920 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD05_RS18920 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD05_RS18920 IPR016040 NAD(P)-binding domain RD05_RS18920 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD05_RS18920 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RD05_RS18925 IPR011701 Major facilitator superfamily RD05_RS18925 IPR020846 Major facilitator superfamily domain RD05_RS18930 IPR001451 Bacterial transferase hexapeptide repeat RD05_RS18930 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RD05_RS18930 IPR011004 Trimeric LpxA-like RD05_RS18930 IPR018357 Hexapeptide transferase, conserved site RD05_RS18930 IPR025877 MobA-like NTP transferase domain RD05_RS18930 IPR029044 Nucleotide-diphospho-sugar transferases RD05_RS18940 IPR008816 Glycine zipper 2TM domain RD05_RS18945 IPR022191 Protein of unknown function DUF3717 RD05_RS18950 IPR003782 Copper chaperone SCO1/SenC RD05_RS18950 IPR012336 Thioredoxin-like fold RD05_RS18955 IPR000537 UbiA prenyltransferase family RD05_RS18955 IPR006369 Protohaem IX farnesyltransferase RD05_RS18960 IPR003780 COX15/CtaA family RD05_RS18965 IPR012336 Thioredoxin-like fold RD05_RS18970 IPR002994 Surfeit locus 1/Shy1 RD05_RS18975 IPR021313 Protein of unknown function DUF2909 RD05_RS18980 IPR000298 Cytochrome c oxidase subunit III domain RD05_RS18980 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD05_RS18980 IPR024791 Cytochrome c oxidase subunit III RD05_RS18985 IPR021344 Protein of unknown function DUF2970 RD05_RS18995 IPR000883 Cytochrome c oxidase subunit I RD05_RS18995 IPR014241 Cytochrome c oxidase, subunit I bacterial type RD05_RS18995 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD05_RS18995 IPR023616 Cytochrome c oxidase, subunit I domain RD05_RS19000 IPR001505 Copper centre Cu(A) RD05_RS19000 IPR002429 Cytochrome c oxidase subunit II C-terminal RD05_RS19000 IPR008972 Cupredoxin RD05_RS19000 IPR009056 Cytochrome c-like domain RD05_RS19000 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RD05_RS19000 IPR014222 Cytochrome c oxidase, subunit II RD05_RS19005 IPR000086 NUDIX hydrolase domain RD05_RS19005 IPR015797 NUDIX hydrolase domain-like RD05_RS19010 IPR000595 Cyclic nucleotide-binding domain RD05_RS19010 IPR006153 Cation/H+ exchanger RD05_RS19010 IPR014710 RmlC-like jelly roll fold RD05_RS19010 IPR018422 Cation/H+ exchanger, CPA1 family RD05_RS19010 IPR018490 Cyclic nucleotide-binding-like RD05_RS19015 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD05_RS19015 IPR013622 Calcineurin-like phosphoesterase C-terminal RD05_RS19015 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RD05_RS19015 IPR029052 Metallo-dependent phosphatase-like RD05_RS19020 IPR000943 RNA polymerase sigma-70 RD05_RS19020 IPR007627 RNA polymerase sigma-70 region 2 RD05_RS19020 IPR007630 RNA polymerase sigma-70 region 4 RD05_RS19020 IPR009042 RNA polymerase sigma-70 region 1.2 RD05_RS19020 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS19020 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RD05_RS19020 IPR013324 RNA polymerase sigma factor, region 3/4 RD05_RS19020 IPR013325 RNA polymerase sigma factor, region 2 RD05_RS19020 IPR014284 RNA polymerase sigma-70 like domain RD05_RS19020 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RD05_RS19030 IPR000801 Putative esterase RD05_RS19030 IPR014186 S-formylglutathione hydrolase RD05_RS19030 IPR029058 Alpha/Beta hydrolase fold RD05_RS19035 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD05_RS19035 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD05_RS19035 IPR011032 GroES (chaperonin 10)-like RD05_RS19035 IPR013149 Alcohol dehydrogenase, C-terminal RD05_RS19035 IPR013154 Alcohol dehydrogenase GroES-like RD05_RS19035 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase RD05_RS19035 IPR016040 NAD(P)-binding domain RD05_RS19035 IPR020843 Polyketide synthase, enoylreductase RD05_RS19040 IPR002686 Transposase IS200-like RD05_RS19045 IPR002489 Glutamate synthase, alpha subunit, C-terminal RD05_RS19045 IPR002932 Glutamate synthase domain RD05_RS19045 IPR006982 Glutamate synthase, central-N RD05_RS19045 IPR013785 Aldolase-type TIM barrel RD05_RS19045 IPR017932 Glutamine amidotransferase type 2 domain RD05_RS19045 IPR029055 Nucleophile aminohydrolases, N-terminal RD05_RS19050 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 RD05_RS19050 IPR009051 Alpha-helical ferredoxin RD05_RS19050 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD05_RS19050 IPR028261 Dihydroprymidine dehydrogenase domain II RD05_RS19055 IPR005618 Outer membrane protein, OmpW RD05_RS19055 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RD05_RS19060 IPR005064 Bordetella uptake gene RD05_RS19065 IPR003439 ABC transporter-like RD05_RS19065 IPR003593 AAA+ ATPase domain RD05_RS19065 IPR017871 ABC transporter, conserved site RD05_RS19065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19070 IPR003453 Permease domain RD05_RS19070 IPR030802 RD05_RS19070 RD05_RS19075 IPR003399 Mammalian cell entry-related RD05_RS19075 IPR030970 RD05_RS19075 RD05_RS19080 IPR007428 VacJ-like lipoprotein RD05_RS19085 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RD05_RS19085 IPR023094 Toluene tolerance protein, alpha-helical RD05_RS19085 IPR032710 RD05_RS19085 RD05_RS19090 IPR003439 ABC transporter-like RD05_RS19090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19095 IPR000412 ABC-2 transporter RD05_RS19095 IPR013525 ABC-2 type transporter RD05_RS19100 IPR002634 BolA protein RD05_RS19105 IPR001986 Enolpyruvate transferase domain RD05_RS19105 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RD05_RS19105 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RD05_RS19110 IPR001348 ATP phosphoribosyltransferase HisG RD05_RS19110 IPR013820 ATP phosphoribosyltransferase, catalytic domain RD05_RS19110 IPR018198 ATP phosphoribosyltransferase, conserved site RD05_RS19110 IPR024893 ATP phosphoribosyltransferase HisG, short form RD05_RS19115 IPR001692 Histidinol dehydrogenase, conserved site RD05_RS19115 IPR012131 Histidinol dehydrogenase RD05_RS19115 IPR016161 Aldehyde/histidinol dehydrogenase RD05_RS19115 IPR022695 Histidinol dehydrogenase, monofunctional RD05_RS19120 IPR004839 Aminotransferase, class I/classII RD05_RS19120 IPR005861 Histidinol-phosphate aminotransferase family RD05_RS19120 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS19120 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS19120 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS19125 IPR000807 Imidazoleglycerol-phosphate dehydratase RD05_RS19125 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RD05_RS19125 IPR020568 Ribosomal protein S5 domain 2-type fold RD05_RS19135 IPR006062 Histidine biosynthesis RD05_RS19135 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA RD05_RS19135 IPR011060 Ribulose-phosphate binding barrel RD05_RS19135 IPR013785 Aldolase-type TIM barrel RD05_RS19135 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RD05_RS19140 IPR004651 Histidine biosynthesis, HisF RD05_RS19140 IPR006062 Histidine biosynthesis RD05_RS19140 IPR011060 Ribulose-phosphate binding barrel RD05_RS19140 IPR013785 Aldolase-type TIM barrel RD05_RS19145 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RD05_RS19145 IPR026660 Phosphoribosyl-AMP cyclohydrolase RD05_RS19150 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase RD05_RS19150 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like RD05_RS19155 IPR001310 Histidine triad (HIT) protein RD05_RS19155 IPR011146 HIT-like domain RD05_RS19155 IPR019808 Histidine triad, conserved site RD05_RS19160 IPR003369 Sec-independent protein translocase protein TatA/B/E RD05_RS19160 IPR006312 Sec-independent protein translocase protein TatA/E RD05_RS19165 IPR003369 Sec-independent protein translocase protein TatA/B/E RD05_RS19165 IPR003998 Twin-arginine translocation protein TatB-like RD05_RS19165 IPR018448 Twin-arginine translocation protein TatB RD05_RS19170 IPR002033 Sec-independent periplasmic protein translocase TatC RD05_RS19175 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS19175 IPR001584 Integrase, catalytic core RD05_RS19175 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS19175 IPR012337 Ribonuclease H-like domain RD05_RS19180 IPR005064 Bordetella uptake gene RD05_RS19185 IPR003898 Bordetella pertussis toxin A RD05_RS19190 IPR003899 Bordetella pertussis toxin B RD05_RS19190 IPR005138 Aerolysin/Pertussis toxin APT RD05_RS19190 IPR008992 Enterotoxin RD05_RS19190 IPR016187 C-type lectin fold RD05_RS19190 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD05_RS19195 IPR008992 Enterotoxin RD05_RS19195 IPR015355 Pertussis toxin, subunit S4 RD05_RS19200 IPR008992 Enterotoxin RD05_RS19200 IPR015356 Pertussis toxin, subunit S5 RD05_RS19205 IPR003899 Bordetella pertussis toxin B RD05_RS19205 IPR005138 Aerolysin/Pertussis toxin APT RD05_RS19205 IPR008992 Enterotoxin RD05_RS19205 IPR016187 C-type lectin fold RD05_RS19205 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD05_RS19210 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RD05_RS19215 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RD05_RS19220 IPR004346 CagE, TrbE, VirB component of type IV transporter system RD05_RS19220 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RD05_RS19220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19225 IPR007688 Conjugal transfer, TrbL/VirB6 RD05_RS19235 IPR007430 Bacterial virulence protein VirB8 RD05_RS19235 IPR026264 Type IV secretion system protein VirB8/PtlE RD05_RS19235 IPR032710 RD05_RS19235 RD05_RS19240 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RD05_RS19240 IPR014148 P-type conjugative transfer protein VirB9 RD05_RS19245 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RD05_RS19250 IPR001482 Type II secretion system protein E RD05_RS19250 IPR014155 Type IV secretion system protein VirB11 RD05_RS19250 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD05_RS19250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19260 IPR000620 Drug/metabolite transporter RD05_RS19265 IPR009057 Homeodomain-like RD05_RS19265 IPR018060 DNA binding HTH domain, AraC-type RD05_RS19265 IPR018062 HTH domain AraC-type, conserved site RD05_RS19270 IPR010652 Protein of unknown function DUF1232 RD05_RS19270 IPR016983 Uncharacterised conserved protein UCP031804 RD05_RS19275 IPR021296 Protein of unknown function DUF2868 RD05_RS19280 IPR006073 GTP binding domain RD05_RS19280 IPR021871 Protein of unknown function DUF3482 RD05_RS19280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19285 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS19285 IPR030678 RD05_RS19285 RD05_RS19290 IPR000515 MetI-like domain RD05_RS19295 IPR000515 MetI-like domain RD05_RS19295 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS19300 IPR003439 ABC transporter-like RD05_RS19300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19305 IPR001584 Integrase, catalytic core RD05_RS19305 IPR009057 Homeodomain-like RD05_RS19305 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS19305 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS19305 IPR012337 Ribonuclease H-like domain RD05_RS19305 IPR024967 DNA-binding domain, IS481-type RD05_RS19310 IPR002813 Arginine biosynthesis protein ArgJ RD05_RS19310 IPR016117 ArgJ-like domain RD05_RS19315 IPR008533 Domain of unknown function DUF815 RD05_RS19315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19320 IPR000086 NUDIX hydrolase domain RD05_RS19320 IPR003733 Thiamine phosphate synthase RD05_RS19320 IPR013785 Aldolase-type TIM barrel RD05_RS19320 IPR015797 NUDIX hydrolase domain-like RD05_RS19320 IPR020084 NUDIX hydrolase, conserved site RD05_RS19320 IPR020476 NUDIX hydrolase RD05_RS19320 IPR022998 Thiamin phosphate synthase superfamily RD05_RS19325 IPR001584 Integrase, catalytic core RD05_RS19325 IPR009057 Homeodomain-like RD05_RS19325 IPR012337 Ribonuclease H-like domain RD05_RS19325 IPR024967 DNA-binding domain, IS481-type RD05_RS19330 IPR001584 Integrase, catalytic core RD05_RS19330 IPR009057 Homeodomain-like RD05_RS19330 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS19330 IPR012337 Ribonuclease H-like domain RD05_RS19330 IPR024967 DNA-binding domain, IS481-type RD05_RS19335 IPR001584 Integrase, catalytic core RD05_RS19335 IPR009057 Homeodomain-like RD05_RS19335 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS19335 IPR012337 Ribonuclease H-like domain RD05_RS19335 IPR024967 DNA-binding domain, IS481-type RD05_RS19340 IPR003423 Outer membrane efflux protein RD05_RS19340 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD05_RS19345 IPR001036 Acriflavin resistance protein RD05_RS19345 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS19350 IPR001036 Acriflavin resistance protein RD05_RS19350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD05_RS19355 IPR006143 RND efflux pump, membrane fusion protein RD05_RS19355 IPR022824 Multidrug resistance protein MdtA RD05_RS19360 IPR009777 Cell division protein ZapD RD05_RS19360 IPR027462 Z ring-associated protein D, C-terminal domain RD05_RS19365 IPR001977 Dephospho-CoA kinase RD05_RS19365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19370 IPR000045 Prepilin type IV endopeptidase, peptidase domain RD05_RS19370 IPR010627 Peptidase A24A, N-terminal RD05_RS19370 IPR014032 Peptidase A24A, prepilin type IV, bacterial RD05_RS19375 IPR007298 Copper resistance lipoprotein NlpE RD05_RS19380 IPR000792 Transcription regulator LuxR, C-terminal RD05_RS19380 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS19380 IPR016032 Signal transduction response regulator, C-terminal effector RD05_RS19385 IPR003721 Pantoate-beta-alanine ligase RD05_RS19385 IPR004821 Cytidyltransferase-like domain RD05_RS19385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD05_RS19390 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA RD05_RS19395 IPR021853 Protein of unknown function DUF3460 RD05_RS19400 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD05_RS19400 IPR011701 Major facilitator superfamily RD05_RS19400 IPR020846 Major facilitator superfamily domain RD05_RS19405 IPR000577 RD05_RS19405 RD05_RS19405 IPR005999 Glycerol kinase RD05_RS19405 IPR018483 Carbohydrate kinase, FGGY, conserved site RD05_RS19405 IPR018484 Carbohydrate kinase, FGGY, N-terminal RD05_RS19405 IPR018485 Carbohydrate kinase, FGGY, C-terminal RD05_RS19410 IPR005265 Uncharacterised protein family UPF0093 RD05_RS19415 IPR005064 Bordetella uptake gene RD05_RS19420 IPR003439 ABC transporter-like RD05_RS19420 IPR003593 AAA+ ATPase domain RD05_RS19420 IPR017871 ABC transporter, conserved site RD05_RS19420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19420 IPR030679 RD05_RS19420 RD05_RS19425 IPR000515 MetI-like domain RD05_RS19425 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS19430 IPR000515 MetI-like domain RD05_RS19430 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD05_RS19435 IPR001638 Extracellular solute-binding protein, family 3 RD05_RS19435 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD05_RS19440 IPR003439 ABC transporter-like RD05_RS19440 IPR003593 AAA+ ATPase domain RD05_RS19440 IPR017871 ABC transporter, conserved site RD05_RS19440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19445 IPR003838 Permease FtsX-like RD05_RS19445 IPR004513 ABC transporter, cell division protein FtsX RD05_RS19450 IPR005659 Chemoreceptor glutamine deamidase CheD RD05_RS19450 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD05_RS19455 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD05_RS19455 IPR029061 Thiamin diphosphate-binding fold RD05_RS19460 IPR000445 Helix-hairpin-helix motif RD05_RS19460 IPR003265 HhH-GPD domain RD05_RS19460 IPR004035 Endonuclease III, iron-sulphur binding site RD05_RS19460 IPR004036 Endonuclease III-like, conserved site-2 RD05_RS19460 IPR005760 A/G-specific adenine glycosylase MutY RD05_RS19460 IPR011257 DNA glycosylase RD05_RS19460 IPR015797 NUDIX hydrolase domain-like RD05_RS19460 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD05_RS19460 IPR029119 MutY, C-terminal RD05_RS19465 IPR001387 Cro/C1-type helix-turn-helix domain RD05_RS19465 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS19470 IPR013216 Methyltransferase type 11 RD05_RS19470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD05_RS19475 IPR001584 Integrase, catalytic core RD05_RS19475 IPR009057 Homeodomain-like RD05_RS19475 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS19475 IPR012337 Ribonuclease H-like domain RD05_RS19475 IPR024967 DNA-binding domain, IS481-type RD05_RS19480 IPR003673 CoA-transferase family III RD05_RS19480 IPR023606 CoA-transferase family III domain RD05_RS19485 IPR003673 CoA-transferase family III RD05_RS19485 IPR023606 CoA-transferase family III domain RD05_RS19490 IPR005656 MmgE/PrpD RD05_RS19495 IPR005064 Bordetella uptake gene RD05_RS19500 IPR001753 Crotonase superfamily RD05_RS19500 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS19500 IPR029045 ClpP/crotonase-like domain RD05_RS19505 IPR000415 Nitroreductase-like RD05_RS19505 IPR029479 Nitroreductase RD05_RS19510 IPR001647 DNA-binding HTH domain, TetR-type RD05_RS19510 IPR009057 Homeodomain-like RD05_RS19510 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD05_RS19510 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD05_RS19515 IPR000891 Pyruvate carboxyltransferase RD05_RS19515 IPR013785 Aldolase-type TIM barrel RD05_RS19520 IPR001753 Crotonase superfamily RD05_RS19520 IPR014748 Crontonase, C-terminal RD05_RS19520 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD05_RS19520 IPR029045 ClpP/crotonase-like domain RD05_RS19525 IPR003673 CoA-transferase family III RD05_RS19525 IPR023606 CoA-transferase family III domain RD05_RS19530 IPR005064 Bordetella uptake gene RD05_RS19535 IPR001584 Integrase, catalytic core RD05_RS19535 IPR009057 Homeodomain-like RD05_RS19535 IPR010982 Lambda repressor-like, DNA-binding domain RD05_RS19535 IPR012337 Ribonuclease H-like domain RD05_RS19535 IPR024967 DNA-binding domain, IS481-type RD05_RS19540 IPR002226 Catalase haem-binding site RD05_RS19540 IPR010582 Catalase immune-responsive domain RD05_RS19540 IPR011614 Catalase core domain RD05_RS19540 IPR018028 Catalase, mono-functional, haem-containing RD05_RS19540 IPR020835 Catalase-like domain RD05_RS19540 IPR024708 Catalase active site RD05_RS19540 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 RD05_RS19545 IPR000515 MetI-like domain RD05_RS19550 IPR003439 ABC transporter-like RD05_RS19550 IPR003593 AAA+ ATPase domain RD05_RS19550 IPR017871 ABC transporter, conserved site RD05_RS19550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19560 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD05_RS19565 IPR002933 Peptidase M20 RD05_RS19565 IPR011650 Peptidase M20, dimerisation domain RD05_RS19565 IPR017439 Amidohydrolase RD05_RS19570 IPR003439 ABC transporter-like RD05_RS19570 IPR003593 AAA+ ATPase domain RD05_RS19570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS19570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19575 IPR003439 ABC transporter-like RD05_RS19575 IPR003593 AAA+ ATPase domain RD05_RS19575 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD05_RS19575 IPR017871 ABC transporter, conserved site RD05_RS19575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19580 IPR000515 MetI-like domain RD05_RS19580 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD05_RS19585 IPR000515 MetI-like domain RD05_RS19590 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD05_RS19590 IPR030678 RD05_RS19590 RD05_RS19595 IPR004520 tRNA modification GTPase MnmE RD05_RS19595 IPR005225 Small GTP-binding protein domain RD05_RS19595 IPR006073 GTP binding domain RD05_RS19595 IPR018948 GTP-binding protein TrmE, N-terminal RD05_RS19595 IPR025867 tRNA modification GTPase MnmE C-terminal domain RD05_RS19595 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD05_RS19595 IPR027368 tRNA modification GTPase MnmE domain 2 RD05_RS19595 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD05_RS19600 IPR011701 Major facilitator superfamily RD05_RS19600 IPR020846 Major facilitator superfamily domain RD05_RS19605 IPR001789 Signal transduction response regulator, receiver domain RD05_RS19605 IPR001867 Signal transduction response regulator, C-terminal RD05_RS19605 IPR011006 CheY-like superfamily RD05_RS19605 IPR011991 Winged helix-turn-helix DNA-binding domain RD05_RS19610 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD05_RS19610 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD05_RS19610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD05_RS19610 IPR013727 Two-component sensor kinase N-terminal RD05_RS19615 IPR005064 Bordetella uptake gene RD05_RS19620 IPR009936 Protein of unknown function DUF1468 RD05_RS19625 IPR002823 Protein of unknown function DUF112, transmembrane RD05_RS19630 IPR004839 Aminotransferase, class I/classII RD05_RS19630 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD05_RS19630 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD05_RS19630 IPR015424 Pyridoxal phosphate-dependent transferase RD05_RS19635 IPR002059 Cold-shock protein, DNA-binding RD05_RS19635 IPR011129 Cold shock protein RD05_RS19635 IPR012156 Cold shock, CspA RD05_RS19635 IPR012340 Nucleic acid-binding, OB-fold RD05_RS19635 IPR019844 Cold-shock conserved site