RD05_RS00005 SM01228 RD05_RS00005 RD05_RS00025 SM00470 ParB-like nuclease domain RD05_RS00030 SM00870 RD05_RS00030 RD05_RS00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RD05_RS00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RD05_RS00075 SM00649 Ribosomal protein L11/L12 RD05_RS00100 SM00663 RNA polymerase I subunit A N-terminus RD05_RS00130 SM00448 cheY-homologous receiver domain RD05_RS00130 SM00862 Transcriptional regulatory protein, C terminal RD05_RS00200 SM00563 Phosphate acyltransferases RD05_RS00240 SM00421 helix_turn_helix, Lux Regulon RD05_RS00285 SM00382 ATPases associated with a variety of cellular activities RD05_RS00300 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS00390 SM00387 Histidine kinase-like ATPases RD05_RS00400 SM00644 RD05_RS00400 RD05_RS00415 SM00382 ATPases associated with a variety of cellular activities RD05_RS00415 SM00962 SRP54-type protein, GTPase domain RD05_RS00415 SM00963 SRP54-type protein, helical bundle domain RD05_RS00515 SM00382 ATPases associated with a variety of cellular activities RD05_RS00540 SM00936 Penicillin-binding protein 5, C-terminal domain RD05_RS00560 SM00729 Elongator protein 3, MiaB family, Radical SAM RD05_RS00605 SM00836 DALR anticodon binding domain RD05_RS00605 SM01016 Arginyl tRNA synthetase N terminal dom RD05_RS00640 SM00382 ATPases associated with a variety of cellular activities RD05_RS00690 SM00382 ATPases associated with a variety of cellular activities RD05_RS00740 SM00829 Enoylreductase RD05_RS00755 SM00382 ATPases associated with a variety of cellular activities RD05_RS00770 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS00775 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS00785 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS00835 SM00257 Lysin motif RD05_RS00845 SM01130 RD05_RS00845 RD05_RS00875 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS00875 SM00895 RD05_RS00875 RD05_RS00900 SM00382 ATPases associated with a variety of cellular activities RD05_RS00945 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS00945 SM00866 RD05_RS00945 RD05_RS00995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD05_RS01015 SM01219 RD05_RS01015 RD05_RS01045 SM01004 Delta-aminolevulinic acid dehydratase RD05_RS01075 SM00662 RNA polymerases D RD05_RS01080 SM00363 S4 RNA-binding domain RD05_RS01080 SM01390 RD05_RS01080 RD05_RS01155 SM01374 RD05_RS01155 RD05_RS01190 SM00322 K homology RNA-binding domain RD05_RS01205 SM01382 RD05_RS01205 RD05_RS01205 SM01383 RD05_RS01205 RD05_RS01225 SM01403 RD05_RS01225 RD05_RS01235 SM00838 Elongation factor G C-terminus RD05_RS01235 SM00889 Elongation factor G, domain IV RD05_RS01315 SM01018 B12 binding domain RD05_RS01335 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain RD05_RS01345 SM00344 helix_turn_helix ASNC type RD05_RS01375 SM00382 ATPases associated with a variety of cellular activities RD05_RS01385 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RD05_RS01385 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RD05_RS01385 SM00493 RD05_RS01385 RD05_RS01420 SM01119 RD05_RS01420 RD05_RS01440 SM00878 Biotin carboxylase C-terminal domain RD05_RS01440 SM01209 RD05_RS01440 RD05_RS01470 SM00849 Metallo-beta-lactamase superfamily RD05_RS01475 SM00422 helix_turn_helix, mercury resistance RD05_RS01495 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS01495 SM00871 Bacterial transcription activator, effector binding domain RD05_RS01520 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS01525 SM00387 Histidine kinase-like ATPases RD05_RS01525 SM00433 TopoisomeraseII RD05_RS01530 SM00480 DNA polymerase III beta subunit RD05_RS01535 SM00382 ATPases associated with a variety of cellular activities RD05_RS01535 SM00760 Bacterial dnaA protein helix-turn-helix domain RD05_RS01550 SM01234 RD05_RS01550 RD05_RS01585 SM00387 Histidine kinase-like ATPases RD05_RS01585 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS01680 SM00244 prohibitin homologues RD05_RS01690 SM01119 RD05_RS01690 RD05_RS01720 SM00869 Autotransporter beta-domain RD05_RS01740 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS01780 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS01780 SM00895 RD05_RS01780 RD05_RS01800 SM00729 Elongator protein 3, MiaB family, Radical SAM RD05_RS01850 SM00344 helix_turn_helix ASNC type RD05_RS01870 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS01940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS01940 SM00387 Histidine kinase-like ATPases RD05_RS01940 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS01945 SM00448 cheY-homologous receiver domain RD05_RS01960 SM00347 helix_turn_helix multiple antibiotic resistance protein RD05_RS02025 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD05_RS02045 SM00382 ATPases associated with a variety of cellular activities RD05_RS02105 SM00450 Rhodanese Homology Domain RD05_RS02110 SM00855 Phosphoglycerate mutase family RD05_RS02120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD05_RS02120 SM00245 tail specific protease RD05_RS02140 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS02170 SM00382 ATPases associated with a variety of cellular activities RD05_RS02175 SM00382 ATPases associated with a variety of cellular activities RD05_RS02215 SM00861 Transketolase, pyrimidine binding domain RD05_RS02225 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS02230 SM00881 CoA binding domain RD05_RS02290 SM01130 RD05_RS02290 RD05_RS02360 SM00829 Enoylreductase RD05_RS02370 SM00881 CoA binding domain RD05_RS02400 SM00344 helix_turn_helix ASNC type RD05_RS02425 SM00881 CoA binding domain RD05_RS02435 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS02465 SM00937 RD05_RS02465 RD05_RS02495 SM01092 CO dehydrogenase flavoprotein C-terminal domain RD05_RS02505 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD05_RS02560 SM00382 ATPases associated with a variety of cellular activities RD05_RS02580 SM00116 Domain in cystathionine beta-synthase and other proteins. RD05_RS02610 SM00834 Putative regulatory protein RD05_RS02630 SM00155 Phospholipase D. Active site motifs. RD05_RS02670 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS02790 SM00382 ATPases associated with a variety of cellular activities RD05_RS02815 SM00487 DEAD-like helicases superfamily RD05_RS02815 SM00490 helicase superfamily c-terminal domain RD05_RS02835 SM00382 ATPases associated with a variety of cellular activities RD05_RS02895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD05_RS02905 SM00905 Dihydroneopterin aldolase RD05_RS02935 SM00925 MltA specific insert domain RD05_RS03015 SM00903 Flavin reductase like domain RD05_RS03040 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS03040 SM00866 RD05_RS03040 RD05_RS03075 SM00382 ATPases associated with a variety of cellular activities RD05_RS03160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS03160 SM00387 Histidine kinase-like ATPases RD05_RS03165 SM00448 cheY-homologous receiver domain RD05_RS03165 SM00862 Transcriptional regulatory protein, C terminal RD05_RS03205 SM00257 Lysin motif RD05_RS03210 SM00849 Metallo-beta-lactamase superfamily RD05_RS03285 SM00822 RD05_RS03285 RD05_RS03295 SM00382 ATPases associated with a variety of cellular activities RD05_RS03300 SM00382 ATPases associated with a variety of cellular activities RD05_RS03380 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS03380 SM00866 RD05_RS03380 RD05_RS03400 SM00422 helix_turn_helix, mercury resistance RD05_RS03430 SM00988 UreE urease accessory protein, N-terminal domain RD05_RS03485 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS03515 SM00984 UDP binding domain RD05_RS03575 SM00448 cheY-homologous receiver domain RD05_RS03575 SM00862 Transcriptional regulatory protein, C terminal RD05_RS03580 SM00387 Histidine kinase-like ATPases RD05_RS03580 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS03615 SM00849 Metallo-beta-lactamase superfamily RD05_RS03620 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RD05_RS03620 SM01232 RD05_RS03620 RD05_RS03625 SM00028 Tetratricopeptide repeats RD05_RS03645 SM01400 RD05_RS03645 RD05_RS03730 SM00869 Autotransporter beta-domain RD05_RS03740 SM00862 Transcriptional regulatory protein, C terminal RD05_RS03775 SM00422 helix_turn_helix, mercury resistance RD05_RS03775 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS03815 SM00344 helix_turn_helix ASNC type RD05_RS03815 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS03865 SM00382 ATPases associated with a variety of cellular activities RD05_RS03870 SM00155 Phospholipase D. Active site motifs. RD05_RS03880 SM00986 Uracil DNA glycosylase superfamily RD05_RS03880 SM00987 UreE urease accessory protein, C-terminal domain RD05_RS03885 SM00487 DEAD-like helicases superfamily RD05_RS03885 SM00490 helicase superfamily c-terminal domain RD05_RS03940 SM00996 S-adenosyl-L-homocysteine hydrolase RD05_RS03940 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD05_RS04010 SM00382 ATPases associated with a variety of cellular activities RD05_RS04025 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD05_RS04040 SM00382 ATPases associated with a variety of cellular activities RD05_RS04040 SM01086 C-terminal, D2-small domain, of ClpB protein RD05_RS04150 SM00344 helix_turn_helix ASNC type RD05_RS04185 SM00151 SWI complex, BAF60b domains RD05_RS04200 SM00382 ATPases associated with a variety of cellular activities RD05_RS04270 SM00842 Cell division protein FtsA RD05_RS04275 SM00864 Tubulin/FtsZ family, GTPase domain RD05_RS04275 SM00865 Tubulin/FtsZ family, C-terminal domain RD05_RS04295 SM00957 SecA DEAD-like domain RD05_RS04295 SM00958 SecA preprotein cross-linking domain RD05_RS04325 SM00344 helix_turn_helix ASNC type RD05_RS04355 SM00955 RD05_RS04355 RD05_RS04385 SM00878 Biotin carboxylase C-terminal domain RD05_RS04465 SM00344 helix_turn_helix ASNC type RD05_RS04495 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS04495 SM00895 RD05_RS04495 RD05_RS04505 SM00487 DEAD-like helicases superfamily RD05_RS04505 SM00490 helicase superfamily c-terminal domain RD05_RS04525 SM00382 ATPases associated with a variety of cellular activities RD05_RS04565 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD05_RS04595 SM00363 S4 RNA-binding domain RD05_RS04690 SM00387 Histidine kinase-like ATPases RD05_RS04695 SM00448 cheY-homologous receiver domain RD05_RS04720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD05_RS04770 SM00257 Lysin motif RD05_RS04810 SM00528 Domain in histone-like proteins of HNS family RD05_RS04830 SM00912 haemagglutination activity domain RD05_RS04865 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS04875 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RD05_RS04875 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RD05_RS04945 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS04945 SM00895 RD05_RS04945 RD05_RS04985 SM00382 ATPases associated with a variety of cellular activities RD05_RS05000 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS05035 SM00382 ATPases associated with a variety of cellular activities RD05_RS05060 SM00248 ankyrin repeats RD05_RS05105 SM00344 helix_turn_helix ASNC type RD05_RS05130 SM00382 ATPases associated with a variety of cellular activities RD05_RS05145 SM00829 Enoylreductase RD05_RS05170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD05_RS05195 SM00822 RD05_RS05195 RD05_RS05260 SM00822 RD05_RS05260 RD05_RS05285 SM00422 helix_turn_helix, mercury resistance RD05_RS05315 SM00382 ATPases associated with a variety of cellular activities RD05_RS05350 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS05350 SM00895 RD05_RS05350 RD05_RS05400 SM00382 ATPases associated with a variety of cellular activities RD05_RS05400 SM00930 RD05_RS05400 RD05_RS05450 SM00116 Domain in cystathionine beta-synthase and other proteins. RD05_RS05450 SM00924 MgtE intracellular N domain RD05_RS05475 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS05490 SM00861 Transketolase, pyrimidine binding domain RD05_RS05525 SM00382 ATPases associated with a variety of cellular activities RD05_RS05540 SM00670 Large family of predicted nucleotide-binding domains RD05_RS05625 SM00822 RD05_RS05625 RD05_RS05690 SM00357 Cold shock protein domain RD05_RS05700 SM01359 RD05_RS05700 RD05_RS05700 SM01360 RD05_RS05700 RD05_RS05710 SM00382 ATPases associated with a variety of cellular activities RD05_RS05710 SM01086 C-terminal, D2-small domain, of ClpB protein RD05_RS05755 SM00382 ATPases associated with a variety of cellular activities RD05_RS05760 SM00382 ATPases associated with a variety of cellular activities RD05_RS05780 SM00869 Autotransporter beta-domain RD05_RS05790 SM00938 Nitrogen regulatory protein P-II RD05_RS05860 SM00422 helix_turn_helix, mercury resistance RD05_RS05885 SM00729 Elongator protein 3, MiaB family, Radical SAM RD05_RS05885 SM00876 Biotin and Thiamin Synthesis associated domain RD05_RS05935 SM00852 Probable molybdopterin binding domain RD05_RS05940 SM00852 Probable molybdopterin binding domain RD05_RS05945 SM00729 Elongator protein 3, MiaB family, Radical SAM RD05_RS05980 SM00938 Nitrogen regulatory protein P-II RD05_RS06040 SM00479 RD05_RS06040 RD05_RS06135 SM01211 RD05_RS06135 RD05_RS06140 SM00912 haemagglutination activity domain RD05_RS06155 SM00347 helix_turn_helix multiple antibiotic resistance protein RD05_RS06160 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS06165 SM01007 Class II Aldolase and Adducin N-terminal domain RD05_RS06205 SM01130 RD05_RS06205 RD05_RS06250 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS06260 SM00420 helix_turn_helix, Deoxyribose operon repressor RD05_RS06260 SM01134 RD05_RS06260 RD05_RS06265 SM00382 ATPases associated with a variety of cellular activities RD05_RS06270 SM00382 ATPases associated with a variety of cellular activities RD05_RS06305 SM00344 helix_turn_helix ASNC type RD05_RS06340 SM00421 helix_turn_helix, Lux Regulon RD05_RS06350 SM00869 Autotransporter beta-domain RD05_RS06360 SM00116 Domain in cystathionine beta-synthase and other proteins. RD05_RS06360 SM01240 RD05_RS06360 RD05_RS06370 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS06395 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS06410 SM00382 ATPases associated with a variety of cellular activities RD05_RS06450 SM00849 Metallo-beta-lactamase superfamily RD05_RS06450 SM01027 Beta-Casp domain RD05_RS06470 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS06490 SM00829 Enoylreductase RD05_RS06500 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS06540 SM00382 ATPases associated with a variety of cellular activities RD05_RS06545 SM00354 helix_turn _helix lactose operon repressor RD05_RS06595 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS06630 SM00873 B3/4 domain RD05_RS06630 SM00874 tRNA synthetase B5 domain RD05_RS06630 SM00896 Ferredoxin-fold anticodon binding domain RD05_RS06635 SM00411 bacterial (prokaryotic) histone like domain RD05_RS06640 SM00422 helix_turn_helix, mercury resistance RD05_RS06745 SM00822 RD05_RS06745 RD05_RS06760 SM00382 ATPases associated with a variety of cellular activities RD05_RS06775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS06775 SM00387 Histidine kinase-like ATPases RD05_RS06775 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS06780 SM00448 cheY-homologous receiver domain RD05_RS06780 SM00862 Transcriptional regulatory protein, C terminal RD05_RS06785 SM00382 ATPases associated with a variety of cellular activities RD05_RS06815 SM00881 CoA binding domain RD05_RS06885 SM00858 RD05_RS06885 RD05_RS06895 SM00240 Forkhead associated domain RD05_RS06895 SM00382 ATPases associated with a variety of cellular activities RD05_RS07045 SM00271 DnaJ molecular chaperone homology domain RD05_RS07070 SM00382 ATPases associated with a variety of cellular activities RD05_RS07095 SM01329 RD05_RS07095 RD05_RS07115 SM00448 cheY-homologous receiver domain RD05_RS07115 SM00862 Transcriptional regulatory protein, C terminal RD05_RS07120 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS07165 SM00463 Small MutS-related domain RD05_RS07175 SM00843 RD05_RS07175 RD05_RS07185 SM00382 ATPases associated with a variety of cellular activities RD05_RS07215 SM00267 diguanylate cyclase RD05_RS07240 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS07260 SM01006 Siderophore biosynthesis protein domain RD05_RS07310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RD05_RS07310 SM00267 diguanylate cyclase RD05_RS07330 SM00421 helix_turn_helix, Lux Regulon RD05_RS07330 SM00448 cheY-homologous receiver domain RD05_RS07335 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD05_RS07380 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS07395 SM00382 ATPases associated with a variety of cellular activities RD05_RS07415 SM00834 Putative regulatory protein RD05_RS07430 SM00421 helix_turn_helix, Lux Regulon RD05_RS07460 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS07470 SM01001 AIR carboxylase RD05_RS07485 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS07490 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS07500 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS07500 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD05_RS07510 SM00382 ATPases associated with a variety of cellular activities RD05_RS07595 SM00382 ATPases associated with a variety of cellular activities RD05_RS07605 SM00493 RD05_RS07605 RD05_RS07675 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RD05_RS07675 SM00534 ATPase domain of DNA mismatch repair MUTS family RD05_RS07680 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RD05_RS07695 SM01130 RD05_RS07695 RD05_RS07710 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS07710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD05_RS07720 SM00382 ATPases associated with a variety of cellular activities RD05_RS07725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD05_RS07725 SM00954 Region found in RelA / SpoT proteins RD05_RS07730 SM01409 RD05_RS07730 RD05_RS07735 SM00072 Guanylate kinase homologues. RD05_RS07750 SM00822 RD05_RS07750 RD05_RS07765 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS07800 SM00052 Putative diguanylate phosphodiesterase RD05_RS07800 SM00267 diguanylate cyclase RD05_RS07815 SM00729 Elongator protein 3, MiaB family, Radical SAM RD05_RS07820 SM01230 RD05_RS07820 RD05_RS07825 SM00091 PAS domain RD05_RS07825 SM00387 Histidine kinase-like ATPases RD05_RS07825 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS07830 SM00382 ATPases associated with a variety of cellular activities RD05_RS07830 SM00448 cheY-homologous receiver domain RD05_RS07855 SM00382 ATPases associated with a variety of cellular activities RD05_RS07900 SM00487 DEAD-like helicases superfamily RD05_RS07900 SM00490 helicase superfamily c-terminal domain RD05_RS07945 SM00382 ATPases associated with a variety of cellular activities RD05_RS07970 SM00984 UDP binding domain RD05_RS08020 SM00382 ATPases associated with a variety of cellular activities RD05_RS08025 SM00382 ATPases associated with a variety of cellular activities RD05_RS08075 SM00327 von Willebrand factor (vWF) type A domain RD05_RS08080 SM00028 Tetratricopeptide repeats RD05_RS08080 SM00327 von Willebrand factor (vWF) type A domain RD05_RS08120 SM00421 helix_turn_helix, Lux Regulon RD05_RS08120 SM00448 cheY-homologous receiver domain RD05_RS08125 SM00869 Autotransporter beta-domain RD05_RS08130 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS08235 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD05_RS08250 SM00822 RD05_RS08250 RD05_RS08350 SM00382 ATPases associated with a variety of cellular activities RD05_RS08355 SM00382 ATPases associated with a variety of cellular activities RD05_RS08440 SM00248 ankyrin repeats RD05_RS08445 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS08450 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS08450 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD05_RS08460 SM00382 ATPases associated with a variety of cellular activities RD05_RS08470 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD05_RS08510 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS08510 SM00895 RD05_RS08510 RD05_RS08550 SM00052 Putative diguanylate phosphodiesterase RD05_RS08555 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS08555 SM00073 Histidine Phosphotransfer domain RD05_RS08555 SM00091 PAS domain RD05_RS08555 SM00387 Histidine kinase-like ATPases RD05_RS08555 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS08555 SM00448 cheY-homologous receiver domain RD05_RS08560 SM00421 helix_turn_helix, Lux Regulon RD05_RS08560 SM00448 cheY-homologous receiver domain RD05_RS08565 SM00912 haemagglutination activity domain RD05_RS08660 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS08680 SM01091 Transporter associated domain RD05_RS08700 SM00028 Tetratricopeptide repeats RD05_RS08705 SM00840 RD05_RS08705 RD05_RS08710 SM00478 endonuclease III RD05_RS08825 SM00382 ATPases associated with a variety of cellular activities RD05_RS08840 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS08845 SM00881 CoA binding domain RD05_RS08875 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD05_RS08900 SM00028 Tetratricopeptide repeats RD05_RS08915 SM00347 helix_turn_helix multiple antibiotic resistance protein RD05_RS08925 SM00421 helix_turn_helix, Lux Regulon RD05_RS08970 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS08990 SM00318 Staphylococcal nuclease homologues RD05_RS09010 SM00382 ATPases associated with a variety of cellular activities RD05_RS09015 SM00347 helix_turn_helix multiple antibiotic resistance protein RD05_RS09060 SM00858 RD05_RS09060 RD05_RS09090 SM00028 Tetratricopeptide repeats RD05_RS09105 SM00382 ATPases associated with a variety of cellular activities RD05_RS09135 SM00841 Elongation factor P, C-terminal RD05_RS09135 SM01185 RD05_RS09135 RD05_RS09195 SM00479 RD05_RS09195 RD05_RS09335 SM00347 helix_turn_helix multiple antibiotic resistance protein RD05_RS09340 SM00411 bacterial (prokaryotic) histone like domain RD05_RS09395 SM00382 ATPases associated with a variety of cellular activities RD05_RS09415 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS09415 SM00895 RD05_RS09415 RD05_RS09455 SM00382 ATPases associated with a variety of cellular activities RD05_RS09475 SM00862 Transcriptional regulatory protein, C terminal RD05_RS09510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD05_RS09510 SM00465 GIY-YIG type nucleases (URI domain) RD05_RS09675 SM00822 RD05_RS09675 RD05_RS09765 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD05_RS09775 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS09785 SM00464 Found in ATP-dependent protease La (LON) RD05_RS09820 SM00382 ATPases associated with a variety of cellular activities RD05_RS09840 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS09840 SM00895 RD05_RS09840 RD05_RS09855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD05_RS09875 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS09915 SM00382 ATPases associated with a variety of cellular activities RD05_RS10020 SM00382 ATPases associated with a variety of cellular activities RD05_RS10065 SM00400 zinc finger RD05_RS10065 SM00493 RD05_RS10065 RD05_RS10065 SM00766 DNA primase DnaG DnaB-binding RD05_RS10080 SM00788 Adenylosuccinate synthetase RD05_RS10090 SM00244 prohibitin homologues RD05_RS10095 SM00244 prohibitin homologues RD05_RS10115 SM00382 ATPases associated with a variety of cellular activities RD05_RS10120 SM00564 beta-propeller repeat RD05_RS10150 SM00562 RD05_RS10150 RD05_RS10165 SM00448 cheY-homologous receiver domain RD05_RS10170 SM00387 Histidine kinase-like ATPases RD05_RS10170 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS10220 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD05_RS10270 SM00382 ATPases associated with a variety of cellular activities RD05_RS10330 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS10330 SM00866 RD05_RS10330 RD05_RS10390 SM00271 DnaJ molecular chaperone homology domain RD05_RS10415 SM00226 Low molecular weight phosphatase family RD05_RS10420 SM00487 DEAD-like helicases superfamily RD05_RS10420 SM00490 helicase superfamily c-terminal domain RD05_RS10435 SM00869 Autotransporter beta-domain RD05_RS10460 SM00882 Coenzyme A transferase RD05_RS10465 SM00882 Coenzyme A transferase RD05_RS10520 SM00382 ATPases associated with a variety of cellular activities RD05_RS10520 SM00464 Found in ATP-dependent protease La (LON) RD05_RS10525 SM00382 ATPases associated with a variety of cellular activities RD05_RS10525 SM00994 ClpX C4-type zinc finger RD05_RS10525 SM01086 C-terminal, D2-small domain, of ClpB protein RD05_RS10545 SM00357 Cold shock protein domain RD05_RS10555 SM00357 Cold shock protein domain RD05_RS10570 SM00869 Autotransporter beta-domain RD05_RS10605 SM00382 ATPases associated with a variety of cellular activities RD05_RS10610 SM00965 Secretin and TonB N terminus short domain RD05_RS10640 SM00904 Riboflavin kinase RD05_RS10665 SM00344 helix_turn_helix ASNC type RD05_RS10725 SM00749 bacterial OsmY and nodulation domain RD05_RS10780 SM00422 helix_turn_helix, mercury resistance RD05_RS10805 SM00257 Lysin motif RD05_RS10820 SM01207 RD05_RS10820 RD05_RS10865 SM00347 helix_turn_helix multiple antibiotic resistance protein RD05_RS10900 SM00869 Autotransporter beta-domain RD05_RS10910 SM00155 Phospholipase D. Active site motifs. RD05_RS10925 SM01005 Alanine racemase, C-terminal domain RD05_RS10935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS10935 SM00331 Sigma factor PP2C-like phosphatases RD05_RS10935 SM01049 RD05_RS10935 RD05_RS11010 SM00382 ATPases associated with a variety of cellular activities RD05_RS11125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD05_RS11125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS11175 SM00382 ATPases associated with a variety of cellular activities RD05_RS11190 SM00450 Rhodanese Homology Domain RD05_RS11205 SM00829 Enoylreductase RD05_RS11220 SM00347 helix_turn_helix multiple antibiotic resistance protein RD05_RS11240 SM01329 RD05_RS11240 RD05_RS11245 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS11265 SM00382 ATPases associated with a variety of cellular activities RD05_RS11330 SM01209 RD05_RS11330 RD05_RS11330 SM01210 RD05_RS11330 RD05_RS11360 SM00869 Autotransporter beta-domain RD05_RS11400 SM00316 Ribosomal protein S1-like RNA-binding domain RD05_RS11420 SM00382 ATPases associated with a variety of cellular activities RD05_RS11475 SM00481 DNA polymerase alpha chain like domain RD05_RS11485 SM00382 ATPases associated with a variety of cellular activities RD05_RS11485 SM00487 DEAD-like helicases superfamily RD05_RS11485 SM00490 helicase superfamily c-terminal domain RD05_RS11485 SM00847 Helicase associated domain (HA2) Add an annotation RD05_RS11550 SM00382 ATPases associated with a variety of cellular activities RD05_RS11635 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS11635 SM00866 RD05_RS11635 RD05_RS11675 SM00981 RD05_RS11675 RD05_RS11730 SM00028 Tetratricopeptide repeats RD05_RS11730 SM00862 Transcriptional regulatory protein, C terminal RD05_RS11740 SM01192 RD05_RS11740 RD05_RS11740 SM01193 RD05_RS11740 RD05_RS11795 SM00382 ATPases associated with a variety of cellular activities RD05_RS11810 SM00882 Coenzyme A transferase RD05_RS11970 SM00358 Double-stranded RNA binding motif RD05_RS11970 SM00535 Ribonuclease III family RD05_RS11980 SM00838 Elongation factor G C-terminus RD05_RS11985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD05_RS12010 SM00825 Beta-ketoacyl synthase RD05_RS12020 SM00822 RD05_RS12020 RD05_RS12025 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RD05_RS12060 SM00644 RD05_RS12060 RD05_RS12120 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD05_RS12125 SM01329 RD05_RS12125 RD05_RS12145 SM00382 ATPases associated with a variety of cellular activities RD05_RS12180 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD05_RS12220 SM00852 Probable molybdopterin binding domain RD05_RS12240 SM00052 Putative diguanylate phosphodiesterase RD05_RS12260 SM00382 ATPases associated with a variety of cellular activities RD05_RS12270 SM00855 Phosphoglycerate mutase family RD05_RS12280 SM00851 MGS-like domain RD05_RS12280 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD05_RS12285 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RD05_RS12350 SM00267 diguanylate cyclase RD05_RS12355 SM00244 prohibitin homologues RD05_RS12415 SM00935 Outer membrane protein (OmpH-like) RD05_RS12425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD05_RS12470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD05_RS12565 SM00382 ATPases associated with a variety of cellular activities RD05_RS12630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD05_RS12630 SM00091 PAS domain RD05_RS12630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD05_RS12630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS12635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD05_RS12635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS12640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD05_RS12640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS12655 SM00047 Lysozyme subfamily 2 RD05_RS12700 SM00858 RD05_RS12700 RD05_RS12715 SM00382 ATPases associated with a variety of cellular activities RD05_RS12715 SM00962 SRP54-type protein, GTPase domain RD05_RS12735 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS12745 SM00382 ATPases associated with a variety of cellular activities RD05_RS12760 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD05_RS12780 SM00354 helix_turn _helix lactose operon repressor RD05_RS12805 SM00881 CoA binding domain RD05_RS12810 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS12810 SM00895 RD05_RS12810 RD05_RS12835 SM00869 Autotransporter beta-domain RD05_RS12855 SM00155 Phospholipase D. Active site motifs. RD05_RS12900 SM00642 Alpha-amylase domain RD05_RS12905 SM00642 Alpha-amylase domain RD05_RS12910 SM00642 Alpha-amylase domain RD05_RS12915 SM00642 Alpha-amylase domain RD05_RS12920 SM00642 Alpha-amylase domain RD05_RS12935 SM00642 Alpha-amylase domain RD05_RS12955 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS13090 SM00953 RD05_RS13090 RD05_RS13125 SM00382 ATPases associated with a variety of cellular activities RD05_RS13175 SM00382 ATPases associated with a variety of cellular activities RD05_RS13180 SM00382 ATPases associated with a variety of cellular activities RD05_RS13215 SM00434 DNA Topoisomerase IV RD05_RS13225 SM00387 Histidine kinase-like ATPases RD05_RS13225 SM00433 TopoisomeraseII RD05_RS13235 SM00357 Cold shock protein domain RD05_RS13235 SM00382 ATPases associated with a variety of cellular activities RD05_RS13235 SM00959 Rho termination factor, N-terminal domain RD05_RS13275 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RD05_RS13275 SM00474 3'-5' exonuclease RD05_RS13275 SM00475 5'-3' exonuclease RD05_RS13275 SM00482 DNA polymerase A domain RD05_RS13315 SM00316 Ribosomal protein S1-like RNA-binding domain RD05_RS13325 SM00363 S4 RNA-binding domain RD05_RS13350 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD05_RS13425 SM00382 ATPases associated with a variety of cellular activities RD05_RS13430 SM00327 von Willebrand factor (vWF) type A domain RD05_RS13455 SM01005 Alanine racemase, C-terminal domain RD05_RS13490 SM00382 ATPases associated with a variety of cellular activities RD05_RS13555 SM00869 Autotransporter beta-domain RD05_RS13560 SM00869 Autotransporter beta-domain RD05_RS13570 SM00382 ATPases associated with a variety of cellular activities RD05_RS13570 SM01086 C-terminal, D2-small domain, of ClpB protein RD05_RS13575 SM00100 Cyclic nucleotide-monophosphate binding domain RD05_RS13575 SM00419 helix_turn_helix, cAMP Regulatory protein RD05_RS13645 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS13660 SM00382 ATPases associated with a variety of cellular activities RD05_RS13720 SM01007 Class II Aldolase and Adducin N-terminal domain RD05_RS13745 SM00822 RD05_RS13745 RD05_RS13755 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD05_RS13810 SM00822 RD05_RS13810 RD05_RS13825 SM00363 S4 RNA-binding domain RD05_RS13835 SM00491 RD05_RS13835 RD05_RS13840 SM00316 Ribosomal protein S1-like RNA-binding domain RD05_RS13840 SM00732 Likely ribonuclease with RNase H fold. RD05_RS13900 SM00861 Transketolase, pyrimidine binding domain RD05_RS13915 SM00344 helix_turn_helix ASNC type RD05_RS13925 SM00919 Malic enzyme, NAD binding domain RD05_RS13925 SM01274 RD05_RS13925 RD05_RS13945 SM00481 DNA polymerase alpha chain like domain RD05_RS13975 SM00869 Autotransporter beta-domain RD05_RS13985 SM00382 ATPases associated with a variety of cellular activities RD05_RS14005 SM00937 RD05_RS14005 RD05_RS14010 SM00822 RD05_RS14010 RD05_RS14035 SM00382 ATPases associated with a variety of cellular activities RD05_RS14055 SM00382 ATPases associated with a variety of cellular activities RD05_RS14065 SM00052 Putative diguanylate phosphodiesterase RD05_RS14065 SM00267 diguanylate cyclase RD05_RS14065 SM00387 Histidine kinase-like ATPases RD05_RS14065 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS14070 SM00448 cheY-homologous receiver domain RD05_RS14070 SM00862 Transcriptional regulatory protein, C terminal RD05_RS14090 SM00116 Domain in cystathionine beta-synthase and other proteins. RD05_RS14125 SM01103 RD05_RS14125 RD05_RS14135 SM00382 ATPases associated with a variety of cellular activities RD05_RS14180 SM00382 ATPases associated with a variety of cellular activities RD05_RS14205 SM00919 Malic enzyme, NAD binding domain RD05_RS14205 SM01274 RD05_RS14205 RD05_RS14255 SM00869 Autotransporter beta-domain RD05_RS14295 SM01323 RD05_RS14295 RD05_RS14320 SM00729 Elongator protein 3, MiaB family, Radical SAM RD05_RS14335 SM01091 Transporter associated domain RD05_RS14375 SM00448 cheY-homologous receiver domain RD05_RS14380 SM00448 cheY-homologous receiver domain RD05_RS14395 SM00260 Two component signalling adaptor domain RD05_RS14400 SM00073 Histidine Phosphotransfer domain RD05_RS14400 SM00260 Two component signalling adaptor domain RD05_RS14400 SM00387 Histidine kinase-like ATPases RD05_RS14400 SM01231 RD05_RS14400 RD05_RS14405 SM00448 cheY-homologous receiver domain RD05_RS14440 SM00316 Ribosomal protein S1-like RNA-binding domain RD05_RS14460 SM00852 Probable molybdopterin binding domain RD05_RS14480 SM00271 DnaJ molecular chaperone homology domain RD05_RS14530 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD05_RS14535 SM00861 Transketolase, pyrimidine binding domain RD05_RS14575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD05_RS14575 SM00091 PAS domain RD05_RS14575 SM00387 Histidine kinase-like ATPases RD05_RS14575 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS14580 SM00421 helix_turn_helix, Lux Regulon RD05_RS14580 SM00448 cheY-homologous receiver domain RD05_RS14625 SM00363 S4 RNA-binding domain RD05_RS14675 SM00729 Elongator protein 3, MiaB family, Radical SAM RD05_RS14695 SM00382 ATPases associated with a variety of cellular activities RD05_RS14730 SM00893 Electron transfer flavoprotein domain RD05_RS14735 SM00893 Electron transfer flavoprotein domain RD05_RS14785 SM00411 bacterial (prokaryotic) histone like domain RD05_RS14790 SM00316 Ribosomal protein S1-like RNA-binding domain RD05_RS14810 SM00830 Chorismate mutase type II RD05_RS14820 SM00434 DNA Topoisomerase IV RD05_RS14925 SM00382 ATPases associated with a variety of cellular activities RD05_RS14975 SM00878 Biotin carboxylase C-terminal domain RD05_RS14980 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS14980 SM00866 RD05_RS14980 RD05_RS15055 SM00382 ATPases associated with a variety of cellular activities RD05_RS15095 SM01387 RD05_RS15095 RD05_RS15100 SM00316 Ribosomal protein S1-like RNA-binding domain RD05_RS15100 SM00322 K homology RNA-binding domain RD05_RS15130 SM00829 Enoylreductase RD05_RS15155 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS15220 SM00450 Rhodanese Homology Domain RD05_RS15245 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS15305 SM00014 Acid phosphatase homologues RD05_RS15360 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD05_RS15365 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD05_RS15450 SM00487 DEAD-like helicases superfamily RD05_RS15450 SM00490 helicase superfamily c-terminal domain RD05_RS15450 SM00982 RD05_RS15450 RD05_RS15450 SM01058 CarD-like/TRCF domain RD05_RS15510 SM00382 ATPases associated with a variety of cellular activities RD05_RS15530 SM00829 Enoylreductase RD05_RS15535 SM00895 RD05_RS15535 RD05_RS15540 SM00869 Autotransporter beta-domain RD05_RS15545 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS15545 SM00895 RD05_RS15545 RD05_RS15575 SM00382 ATPases associated with a variety of cellular activities RD05_RS15590 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS15610 SM00382 ATPases associated with a variety of cellular activities RD05_RS15690 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RD05_RS15695 SM00862 Transcriptional regulatory protein, C terminal RD05_RS15700 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS15735 SM00965 Secretin and TonB N terminus short domain RD05_RS15740 SM00867 YceI-like domain RD05_RS15775 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS15795 SM00382 ATPases associated with a variety of cellular activities RD05_RS15860 SM00650 Ribosomal RNA adenine dimethylases RD05_RS15905 SM00382 ATPases associated with a variety of cellular activities RD05_RS15960 SM00448 cheY-homologous receiver domain RD05_RS15960 SM00862 Transcriptional regulatory protein, C terminal RD05_RS16190 SM00382 ATPases associated with a variety of cellular activities RD05_RS16195 SM00382 ATPases associated with a variety of cellular activities RD05_RS16220 SM00947 Carbonic anhydrase RD05_RS16235 SM00341 Helicase and RNase D C-terminal RD05_RS16235 SM00487 DEAD-like helicases superfamily RD05_RS16235 SM00490 helicase superfamily c-terminal domain RD05_RS16235 SM00956 RD05_RS16235 RD05_RS16240 SM00382 ATPases associated with a variety of cellular activities RD05_RS16255 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD05_RS16265 SM00798 AICARFT/IMPCHase bienzyme RD05_RS16265 SM00851 MGS-like domain RD05_RS16290 SM01011 Aminopeptidase P, N-terminal domain RD05_RS16365 SM00487 DEAD-like helicases superfamily RD05_RS16365 SM00490 helicase superfamily c-terminal domain RD05_RS16385 SM00852 Probable molybdopterin binding domain RD05_RS16390 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS16470 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS16470 SM00895 RD05_RS16470 RD05_RS16490 SM00919 Malic enzyme, NAD binding domain RD05_RS16490 SM01274 RD05_RS16490 RD05_RS16510 SM00382 ATPases associated with a variety of cellular activities RD05_RS16540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD05_RS16575 SM00382 ATPases associated with a variety of cellular activities RD05_RS16575 SM00962 SRP54-type protein, GTPase domain RD05_RS16575 SM00963 SRP54-type protein, helical bundle domain RD05_RS16580 SM00880 RD05_RS16580 RD05_RS16620 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS16660 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RD05_RS16680 SM00869 Autotransporter beta-domain RD05_RS16690 SM00883 Chaperonin 10 Kd subunit RD05_RS16745 SM00267 diguanylate cyclase RD05_RS16750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD05_RS16795 SM00155 Phospholipase D. Active site motifs. RD05_RS16830 SM01144 RD05_RS16830 RD05_RS16840 SM00316 Ribosomal protein S1-like RNA-binding domain RD05_RS16840 SM00357 Cold shock protein domain RD05_RS16840 SM00955 RD05_RS16840 RD05_RS16845 SM00967 RNA 2'-O ribose methyltransferase substrate binding RD05_RS16855 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RD05_RS16860 SM00411 bacterial (prokaryotic) histone like domain RD05_RS16885 SM00448 cheY-homologous receiver domain RD05_RS16885 SM00862 Transcriptional regulatory protein, C terminal RD05_RS16890 SM00387 Histidine kinase-like ATPases RD05_RS16890 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS16945 SM01130 RD05_RS16945 RD05_RS16950 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS16950 SM00895 RD05_RS16950 RD05_RS16965 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS16980 SM00387 Histidine kinase-like ATPases RD05_RS16980 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS16990 SM00448 cheY-homologous receiver domain RD05_RS16990 SM00862 Transcriptional regulatory protein, C terminal RD05_RS17000 SM00986 Uracil DNA glycosylase superfamily RD05_RS17000 SM00987 UreE urease accessory protein, C-terminal domain RD05_RS17010 SM00968 SMC proteins Flexible Hinge Domain RD05_RS17015 SM00771 ZipA, C-terminal domain (FtsZ-binding) RD05_RS17020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD05_RS17020 SM00292 breast cancer carboxy-terminal domain RD05_RS17020 SM00532 Ligase N family RD05_RS17045 SM00382 ATPases associated with a variety of cellular activities RD05_RS17070 SM00382 ATPases associated with a variety of cellular activities RD05_RS17100 SM00382 ATPases associated with a variety of cellular activities RD05_RS17105 SM00382 ATPases associated with a variety of cellular activities RD05_RS17110 SM00478 endonuclease III RD05_RS17110 SM00525 RD05_RS17110 RD05_RS17155 SM00954 Region found in RelA / SpoT proteins RD05_RS17195 SM00316 Ribosomal protein S1-like RNA-binding domain RD05_RS17200 SM00363 S4 RNA-binding domain RD05_RS17270 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD05_RS17285 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS17285 SM00895 RD05_RS17285 RD05_RS17295 SM00357 Cold shock protein domain RD05_RS17365 SM00838 Elongation factor G C-terminus RD05_RS17365 SM00889 Elongation factor G, domain IV RD05_RS17370 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS17400 SM00479 RD05_RS17400 RD05_RS17495 SM00450 Rhodanese Homology Domain RD05_RS17535 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS17540 SM00450 Rhodanese Homology Domain RD05_RS17605 SM00749 bacterial OsmY and nodulation domain RD05_RS17680 SM00845 GatB domain RD05_RS17695 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD05_RS17720 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS17740 SM01236 RD05_RS17740 RD05_RS17755 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS17755 SM00895 RD05_RS17755 RD05_RS17800 SM00965 Secretin and TonB N terminus short domain RD05_RS17820 SM00382 ATPases associated with a variety of cellular activities RD05_RS17845 SM00267 diguanylate cyclase RD05_RS17875 SM00849 Metallo-beta-lactamase superfamily RD05_RS17925 SM00563 Phosphate acyltransferases RD05_RS17940 SM00732 Likely ribonuclease with RNase H fold. RD05_RS18010 SM00382 ATPases associated with a variety of cellular activities RD05_RS18015 SM00382 ATPases associated with a variety of cellular activities RD05_RS18040 SM00347 helix_turn_helix multiple antibiotic resistance protein RD05_RS18090 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS18100 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS18130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD05_RS18210 SM00382 ATPases associated with a variety of cellular activities RD05_RS18215 SM00382 ATPases associated with a variety of cellular activities RD05_RS18295 SM00646 RD05_RS18295 RD05_RS18305 SM00853 MutL C terminal dimerisation domain RD05_RS18305 SM01340 RD05_RS18305 RD05_RS18320 SM00382 ATPases associated with a variety of cellular activities RD05_RS18360 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS18360 SM00895 RD05_RS18360 RD05_RS18425 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS18425 SM00895 RD05_RS18425 RD05_RS18455 SM00869 Autotransporter beta-domain RD05_RS18475 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS18480 SM00882 Coenzyme A transferase RD05_RS18485 SM00882 Coenzyme A transferase RD05_RS18535 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS18535 SM00895 RD05_RS18535 RD05_RS18630 SM00450 Rhodanese Homology Domain RD05_RS18675 SM00487 DEAD-like helicases superfamily RD05_RS18675 SM00490 helicase superfamily c-terminal domain RD05_RS18690 SM00382 ATPases associated with a variety of cellular activities RD05_RS18715 SM00978 RD05_RS18715 RD05_RS18725 SM00448 cheY-homologous receiver domain RD05_RS18725 SM00862 Transcriptional regulatory protein, C terminal RD05_RS18730 SM00091 PAS domain RD05_RS18730 SM00387 Histidine kinase-like ATPases RD05_RS18730 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS18735 SM00448 cheY-homologous receiver domain RD05_RS18735 SM00862 Transcriptional regulatory protein, C terminal RD05_RS18740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD05_RS18740 SM00387 Histidine kinase-like ATPases RD05_RS18740 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS18765 SM00796 Allophanate hydrolase subunit 1 RD05_RS18770 SM00797 Allophanate hydrolase subunit 2 RD05_RS18780 SM00346 helix_turn_helix isocitrate lyase regulation RD05_RS18815 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD05_RS18815 SM00895 RD05_RS18815 RD05_RS18870 SM00917 LeuA allosteric (dimerisation) domain RD05_RS18905 SM00382 ATPases associated with a variety of cellular activities RD05_RS18920 SM00984 UDP binding domain RD05_RS19010 SM00100 Cyclic nucleotide-monophosphate binding domain RD05_RS19035 SM00829 Enoylreductase RD05_RS19065 SM00382 ATPases associated with a variety of cellular activities RD05_RS19175 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS19265 SM00342 helix_turn_helix, arabinose operon control protein RD05_RS19380 SM00421 helix_turn_helix, Lux Regulon RD05_RS19420 SM00382 ATPases associated with a variety of cellular activities RD05_RS19435 SM00062 Bacterial periplasmic substrate-binding proteins RD05_RS19440 SM00382 ATPases associated with a variety of cellular activities RD05_RS19460 SM00478 endonuclease III RD05_RS19465 SM00530 Helix-turn-helix XRE-family like proteins RD05_RS19540 SM01060 RD05_RS19540 RD05_RS19550 SM00382 ATPases associated with a variety of cellular activities RD05_RS19570 SM00382 ATPases associated with a variety of cellular activities RD05_RS19575 SM00382 ATPases associated with a variety of cellular activities RD05_RS19605 SM00448 cheY-homologous receiver domain RD05_RS19605 SM00862 Transcriptional regulatory protein, C terminal RD05_RS19610 SM00387 Histidine kinase-like ATPases RD05_RS19610 SM00388 His Kinase A (phosphoacceptor) domain RD05_RS19635 SM00357 Cold shock protein domain