locus-tag class description RD06_RS00005 PF01134 Glucose inhibited division protein A RD06_RS00005 PF13932 GidA associated domain RD06_RS00010 PF02527 rRNA small subunit methyltransferase G RD06_RS00015 PF13614 AAA domain RD06_RS00025 PF02195 ParB-like nuclease domain RD06_RS00025 PF17762 HTH domain found in ParB protein RD06_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain RD06_RS00030 PF00710 Asparaginase, N-terminal RD06_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain RD06_RS00035 PF00710 Asparaginase, N-terminal RD06_RS00055 PF03144 Elongation factor Tu domain 2 RD06_RS00055 PF00009 Elongation factor Tu GTP binding domain RD06_RS00055 PF03143 Elongation factor Tu C-terminal domain RD06_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RD06_RS00070 PF02357 Transcription termination factor nusG RD06_RS00070 PF00467 KOW motif RD06_RS00075 PF03946 Ribosomal protein L11, N-terminal domain RD06_RS00075 PF00298 Ribosomal protein L11, RNA binding domain RD06_RS00080 PF00687 Ribosomal protein L1p/L10e family RD06_RS00085 PF00466 Ribosomal protein L10 RD06_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain RD06_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain RD06_RS00095 PF04560 RNA polymerase Rpb2, domain 7 RD06_RS00095 PF00562 RNA polymerase Rpb2, domain 6 RD06_RS00095 PF10385 RNA polymerase beta subunit external 1 domain RD06_RS00095 PF04565 RNA polymerase Rpb2, domain 3 RD06_RS00095 PF04561 RNA polymerase Rpb2, domain 2 RD06_RS00095 PF04563 RNA polymerase beta subunit RD06_RS00100 PF05000 RNA polymerase Rpb1, domain 4 RD06_RS00100 PF04983 RNA polymerase Rpb1, domain 3 RD06_RS00100 PF04997 RNA polymerase Rpb1, domain 1 RD06_RS00100 PF00623 RNA polymerase Rpb1, domain 2 RD06_RS00100 PF04998 RNA polymerase Rpb1, domain 5 RD06_RS00130 PF00072 Response regulator receiver domain RD06_RS00130 PF00486 Transcriptional regulatory protein, C terminal RD06_RS00140 PF02515 CoA-transferase family III RD06_RS00155 PF01575 MaoC like domain RD06_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS00160 PF03466 LysR substrate binding domain RD06_RS00165 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit RD06_RS00190 PF05746 DALR anticodon binding domain RD06_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit RD06_RS00200 PF01553 Acyltransferase RD06_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD06_RS00215 PF01327 Polypeptide deformylase RD06_RS00250 PF02615 Malate/L-lactate dehydrogenase RD06_RS00260 PF00561 alpha/beta hydrolase fold RD06_RS00265 PF07021 Methionine biosynthesis protein MetW RD06_RS00265 PF00561 alpha/beta hydrolase fold RD06_RS00275 PF07690 Major Facilitator Superfamily RD06_RS00285 PF01177 Asp/Glu/Hydantoin racemase RD06_RS00290 PF00005 ABC transporter RD06_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS00335 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS00350 PF00175 Oxidoreductase NAD-binding domain RD06_RS00350 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS00350 PF00970 Oxidoreductase FAD-binding domain RD06_RS00355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS00365 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS00395 PF00183 Hsp90 protein RD06_RS00400 PF00043 Glutathione S-transferase, C-terminal domain RD06_RS00400 PF13417 Glutathione S-transferase, N-terminal domain RD06_RS00405 PF01510 N-acetylmuramoyl-L-alanine amidase RD06_RS00415 PF01578 Cytochrome C assembly protein RD06_RS00420 PF00448 SRP54-type protein, GTPase domain RD06_RS00420 PF02881 SRP54-type protein, helical bundle domain RD06_RS00420 PF02978 Signal peptide binding domain RD06_RS00435 PF02719 Polysaccharide biosynthesis protein RD06_RS00445 PF10997 Alternate to MurJ RD06_RS00450 PF00862 Sucrose synthase RD06_RS00450 PF00534 Glycosyl transferases group 1 RD06_RS00455 PF02397 Bacterial sugar transferase RD06_RS00460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD06_RS00470 PF02350 UDP-N-acetylglucosamine 2-epimerase RD06_RS00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD06_RS00480 PF00132 Bacterial transferase hexapeptide (six repeats) RD06_RS00485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD06_RS00485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD06_RS00490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD06_RS00495 PF00534 Glycosyl transferases group 1 RD06_RS00495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RD06_RS00505 PF03309 Type III pantothenate kinase RD06_RS00515 PF02405 Permease MlaE RD06_RS00520 PF00005 ABC transporter RD06_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain RD06_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase RD06_RS00550 PF01063 Amino-transferase class IV RD06_RS00555 PF04359 Protein of unknown function (DUF493) RD06_RS00560 PF03099 Biotin/lipoate A/B protein ligase family RD06_RS00565 PF04055 Radical SAM superfamily RD06_RS00565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RD06_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RD06_RS00575 PF04321 RmlD substrate binding domain RD06_RS00580 PF16363 GDP-mannose 4,6 dehydratase RD06_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme RD06_RS00600 PF00085 Thioredoxin RD06_RS00600 PF01323 DSBA-like thioredoxin domain RD06_RS00610 PF00750 tRNA synthetases class I (R) RD06_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain RD06_RS00610 PF05746 DALR anticodon binding domain RD06_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS00640 PF13416 Bacterial extracellular solute-binding protein RD06_RS00645 PF17912 MalK OB fold domain RD06_RS00645 PF00005 ABC transporter RD06_RS00650 PF00149 Calcineurin-like phosphoesterase RD06_RS00660 PF12857 TOBE-like domain RD06_RS00660 PF00005 ABC transporter RD06_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS00680 PF00356 Bacterial regulatory proteins, lacI family RD06_RS00690 PF01425 Amidase RD06_RS00695 PF00682 HMGL-like RD06_RS00695 PF08502 LeuA allosteric (dimerisation) domain RD06_RS00705 PF00309 Sigma-54 factor, Activator interacting domain (AID) RD06_RS00705 PF04963 Sigma-54 factor, core binding domain RD06_RS00705 PF04552 Sigma-54, DNA binding domain RD06_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS00715 PF03466 LysR substrate binding domain RD06_RS00730 PF13609 Gram-negative porin RD06_RS00735 PF00585 C-terminal regulatory domain of Threonine dehydratase RD06_RS00735 PF00291 Pyridoxal-phosphate dependent enzyme RD06_RS00750 PF00392 Bacterial regulatory proteins, gntR family RD06_RS00750 PF07729 FCD domain RD06_RS00755 PF02515 CoA-transferase family III RD06_RS00765 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS00770 PF01494 FAD binding domain RD06_RS00775 PF01494 FAD binding domain RD06_RS00780 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS00790 PF03746 LamB/YcsF family RD06_RS00795 PF02626 Carboxyltransferase domain, subdomain A and B RD06_RS00800 PF02682 Carboxyltransferase domain, subdomain C and D RD06_RS00810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS00810 PF03466 LysR substrate binding domain RD06_RS00815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD06_RS00815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD06_RS00815 PF01842 ACT domain RD06_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS00825 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS00825 PF00672 HAMP domain RD06_RS00830 PF00072 Response regulator receiver domain RD06_RS00830 PF00486 Transcriptional regulatory protein, C terminal RD06_RS00840 PF00072 Response regulator receiver domain RD06_RS00840 PF00486 Transcriptional regulatory protein, C terminal RD06_RS00845 PF01209 ubiE/COQ5 methyltransferase family RD06_RS00860 PF03109 ABC1 family RD06_RS00875 PF00005 ABC transporter RD06_RS00875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS00880 PF04536 TPM domain RD06_RS00890 PF00270 DEAD/DEAH box helicase RD06_RS00890 PF00271 Helicase conserved C-terminal domain RD06_RS00895 PF01810 LysE type translocator RD06_RS00900 PF03144 Elongation factor Tu domain 2 RD06_RS00900 PF00009 Elongation factor Tu GTP binding domain RD06_RS00900 PF16658 Class II release factor RF3, C-terminal domain RD06_RS00910 PF00210 Ferritin-like domain RD06_RS00935 PF17773 UPF0176 acylphosphatase like domain RD06_RS00935 PF00581 Rhodanese-like domain RD06_RS00940 PF01588 Putative tRNA binding domain RD06_RS00940 PF09334 tRNA synthetases class I (M) RD06_RS00950 PF10609 NUBPL iron-transfer P-loop NTPase RD06_RS00965 PF00692 dUTPase RD06_RS00990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RD06_RS00990 PF01276 Orn/Lys/Arg decarboxylase, major domain RD06_RS00990 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RD06_RS01005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD06_RS01005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD06_RS01010 PF02535 ZIP Zinc transporter RD06_RS01015 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD06_RS01015 PF01571 Aminomethyltransferase folate-binding domain RD06_RS01020 PF01597 Glycine cleavage H-protein RD06_RS01025 PF02347 Glycine cleavage system P-protein RD06_RS01030 PF07729 FCD domain RD06_RS01030 PF00392 Bacterial regulatory proteins, gntR family RD06_RS01035 PF02515 CoA-transferase family III RD06_RS01045 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS01065 PF12146 Serine aminopeptidase, S33 RD06_RS01075 PF02426 Muconolactone delta-isomerase RD06_RS01080 PF01144 Coenzyme A transferase RD06_RS01085 PF01144 Coenzyme A transferase RD06_RS01090 PF01614 Bacterial transcriptional regulator RD06_RS01090 PF09339 IclR helix-turn-helix domain RD06_RS01100 PF02667 Short chain fatty acid transporter RD06_RS01105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD06_RS01105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD06_RS01110 PF00082 Subtilase family RD06_RS01110 PF03797 Autotransporter beta-domain RD06_RS01115 PF00311 Phosphoenolpyruvate carboxylase RD06_RS01120 PF06508 Queuosine biosynthesis protein QueC RD06_RS01145 PF02913 FAD linked oxidases, C-terminal domain RD06_RS01145 PF01565 FAD binding domain RD06_RS01150 PF00171 Aldehyde dehydrogenase family RD06_RS01155 PF01964 Radical SAM ThiC family RD06_RS01155 PF13667 ThiC-associated domain RD06_RS01160 PF07549 SecD/SecF GG Motif RD06_RS01160 PF02355 Protein export membrane protein RD06_RS01165 PF09518 HindIII restriction endonuclease RD06_RS01195 PF02627 Carboxymuconolactone decarboxylase family RD06_RS01200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD06_RS01200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD06_RS01205 PF07702 UTRA domain RD06_RS01205 PF00392 Bacterial regulatory proteins, gntR family RD06_RS01210 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS01215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS01225 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS01230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RD06_RS01235 PF12626 Polymerase A arginine-rich C-terminus RD06_RS01235 PF01743 Poly A polymerase head domain RD06_RS01235 PF12627 Probable RNA and SrmB- binding site of polymerase A RD06_RS01245 PF00308 Bacterial dnaA protein RD06_RS01250 PF02769 AIR synthase related protein, C-terminal domain RD06_RS01250 PF00586 AIR synthase related protein, N-terminal domain RD06_RS01260 PF08676 MutL C terminal dimerisation domain RD06_RS01260 PF01119 DNA mismatch repair protein, C-terminal domain RD06_RS01265 PF09335 SNARE associated Golgi protein RD06_RS01270 PF01520 N-acetylmuramoyl-L-alanine amidase RD06_RS01270 PF11741 AMIN domain RD06_RS01275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RD06_RS01280 PF10415 Fumarase C C-terminus RD06_RS01280 PF00206 Lyase RD06_RS01290 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS01295 PF03466 LysR substrate binding domain RD06_RS01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS01305 PF02515 CoA-transferase family III RD06_RS01310 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS01315 PF18158 Adaptive response protein AidB N-terminal domain RD06_RS01315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS01315 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS01335 PF01654 Cytochrome bd terminal oxidase subunit I RD06_RS01340 PF02322 Cytochrome bd terminal oxidase subunit II RD06_RS01345 PF08173 Membrane bound YbgT-like protein RD06_RS01350 PF00005 ABC transporter RD06_RS01350 PF00664 ABC transporter transmembrane region RD06_RS01355 PF00005 ABC transporter RD06_RS01355 PF00664 ABC transporter transmembrane region RD06_RS01360 PF00156 Phosphoribosyl transferase domain RD06_RS01375 PF13609 Gram-negative porin RD06_RS01400 PF04386 Stringent starvation protein B RD06_RS01405 PF02798 Glutathione S-transferase, N-terminal domain RD06_RS01405 PF00043 Glutathione S-transferase, C-terminal domain RD06_RS01410 PF02167 Cytochrome C1 family RD06_RS01415 PF00033 Cytochrome b/b6/petB RD06_RS01415 PF00032 Cytochrome b(C-terminal)/b6/petD RD06_RS01420 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RD06_RS01420 PF00355 Rieske [2Fe-2S] domain RD06_RS01425 PF01741 Large-conductance mechanosensitive channel, MscL RD06_RS01430 PF01784 NIF3 (NGG1p interacting factor 3) RD06_RS01435 PF13180 PDZ domain RD06_RS01445 PF04299 Putative FMN-binding domain RD06_RS01450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD06_RS01455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS01460 PF07859 alpha/beta hydrolase fold RD06_RS01470 PF00682 HMGL-like RD06_RS01470 PF08502 LeuA allosteric (dimerisation) domain RD06_RS01475 PF12833 Helix-turn-helix domain RD06_RS01480 PF00920 Dehydratase family RD06_RS01485 PF07690 Major Facilitator Superfamily RD06_RS01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS01490 PF03466 LysR substrate binding domain RD06_RS01500 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) RD06_RS01530 PF07859 alpha/beta hydrolase fold RD06_RS01540 PF02653 Branched-chain amino acid transport system / permease component RD06_RS01545 PF02653 Branched-chain amino acid transport system / permease component RD06_RS01545 PF11862 Domain of unknown function (DUF3382) RD06_RS01550 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS01550 PF00005 ABC transporter RD06_RS01555 PF00005 ABC transporter RD06_RS01570 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS01575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS01575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS01575 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS01580 PF00501 AMP-binding enzyme RD06_RS01580 PF13193 AMP-binding enzyme C-terminal domain RD06_RS01600 PF00202 Aminotransferase class-III RD06_RS01605 PF02581 Thiamine monophosphate synthase RD06_RS01610 PF08543 Phosphomethylpyrimidine kinase RD06_RS01615 PF00301 Rubredoxin RD06_RS01620 PF02622 Uncharacterized ACR, COG1678 RD06_RS01625 PF03652 Holliday junction resolvase RD06_RS01630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD06_RS01630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD06_RS01635 PF01979 Amidohydrolase family RD06_RS01640 PF01553 Acyltransferase RD06_RS01645 PF00149 Calcineurin-like phosphoesterase RD06_RS01655 PF00912 Transglycosylase RD06_RS01670 PF13193 AMP-binding enzyme C-terminal domain RD06_RS01670 PF00501 AMP-binding enzyme RD06_RS01675 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS01690 PF12706 Beta-lactamase superfamily domain RD06_RS01695 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS01715 PF00563 EAL domain RD06_RS01715 PF00990 Diguanylate cyclase, GGDEF domain RD06_RS01715 PF03707 Bacterial signalling protein N terminal repeat RD06_RS01720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD06_RS01720 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RD06_RS01725 PF13532 2OG-Fe(II) oxygenase superfamily RD06_RS01730 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA RD06_RS01735 PF04463 Protein of unknown function (DUF523) RD06_RS01740 PF00005 ABC transporter RD06_RS01745 PF01032 FecCD transport family RD06_RS01750 PF01497 Periplasmic binding protein RD06_RS01755 PF05171 Haemin-degrading HemS.ChuX domain RD06_RS01760 PF00593 TonB dependent receptor RD06_RS01760 PF04886 PT repeat RD06_RS01760 PF07715 TonB-dependent Receptor Plug Domain RD06_RS01765 PF04773 FecR protein RD06_RS01765 PF16220 Domain of unknown function (DUF4880) RD06_RS01770 PF08281 Sigma-70, region 4 RD06_RS01770 PF04542 Sigma-70 region 2 RD06_RS01795 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD06_RS01805 PF07729 FCD domain RD06_RS01805 PF00392 Bacterial regulatory proteins, gntR family RD06_RS01825 PF00171 Aldehyde dehydrogenase family RD06_RS01835 PF00970 Oxidoreductase FAD-binding domain RD06_RS01835 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS01835 PF00175 Oxidoreductase NAD-binding domain RD06_RS01860 PF03458 UPF0126 domain RD06_RS01865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD06_RS01865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD06_RS01870 PF03372 Endonuclease/Exonuclease/phosphatase family RD06_RS01875 PF00156 Phosphoribosyl transferase domain RD06_RS01880 PF02637 GatB domain RD06_RS01880 PF02934 GatB/GatE catalytic domain RD06_RS01885 PF01425 Amidase RD06_RS01890 PF02686 Glu-tRNAGln amidotransferase C subunit RD06_RS01900 PF04085 rod shape-determining protein MreC RD06_RS01910 PF03717 Penicillin-binding Protein dimerisation domain RD06_RS01910 PF00905 Penicillin binding protein transpeptidase domain RD06_RS01915 PF01098 Cell cycle protein RD06_RS01920 PF02615 Malate/L-lactate dehydrogenase RD06_RS01925 PF00939 Sodium:sulfate symporter transmembrane region RD06_RS01930 PF00440 Bacterial regulatory proteins, tetR family RD06_RS01940 PF00696 Amino acid kinase family RD06_RS01945 PF03180 NLPA lipoprotein RD06_RS01950 PF00578 AhpC/TSA family RD06_RS01955 PF04972 BON domain RD06_RS01960 PF13580 SIS domain RD06_RS01965 PF02021 Uncharacterised protein family UPF0102 RD06_RS01970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD06_RS01975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RD06_RS01975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD06_RS01995 PF02515 CoA-transferase family III RD06_RS02000 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02005 PF02515 CoA-transferase family III RD06_RS02025 PF09339 IclR helix-turn-helix domain RD06_RS02030 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS02040 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02045 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS02045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD06_RS02045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD06_RS02050 PF02515 CoA-transferase family III RD06_RS02055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS02055 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS02055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS02060 PF03466 LysR substrate binding domain RD06_RS02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS02070 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02090 PF00892 EamA-like transporter family RD06_RS02095 PF01810 LysE type translocator RD06_RS02100 PF12146 Serine aminopeptidase, S33 RD06_RS02115 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RD06_RS02120 PF00535 Glycosyl transferase family 2 RD06_RS02135 PF03616 Sodium/glutamate symporter RD06_RS02145 PF02667 Short chain fatty acid transporter RD06_RS02160 PF00929 Exonuclease RD06_RS02165 PF00873 AcrB/AcrD/AcrF family RD06_RS02185 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02190 PF03466 LysR substrate binding domain RD06_RS02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS02195 PF01565 FAD binding domain RD06_RS02195 PF09330 D-lactate dehydrogenase, membrane binding RD06_RS02200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS02200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS02200 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS02205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS02205 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS02205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS02210 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02215 PF01546 Peptidase family M20/M25/M40 RD06_RS02215 PF07687 Peptidase dimerisation domain RD06_RS02225 PF01042 Endoribonuclease L-PSP RD06_RS02235 PF08240 Alcohol dehydrogenase GroES-like domain RD06_RS02235 PF00107 Zinc-binding dehydrogenase RD06_RS02240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS02240 PF03466 LysR substrate binding domain RD06_RS02245 PF13380 CoA binding domain RD06_RS02245 PF13607 Succinyl-CoA ligase like flavodoxin domain RD06_RS02250 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS02260 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02265 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RD06_RS02270 PF01380 SIS domain RD06_RS02275 PF01037 Lrp/AsnC ligand binding domain RD06_RS02280 PF02803 Thiolase, C-terminal domain RD06_RS02280 PF00108 Thiolase, N-terminal domain RD06_RS02285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD06_RS02285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD06_RS02285 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS02290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS02290 PF12806 Acetyl-CoA dehydrogenase C-terminal like RD06_RS02290 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS02290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS02295 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02300 PF13607 Succinyl-CoA ligase like flavodoxin domain RD06_RS02300 PF13380 CoA binding domain RD06_RS02300 PF00583 Acetyltransferase (GNAT) family RD06_RS02315 PF00384 Molybdopterin oxidoreductase RD06_RS02315 PF01568 Molydopterin dinucleotide binding domain RD06_RS02335 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RD06_RS02335 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RD06_RS02335 PF01488 Shikimate / quinate 5-dehydrogenase RD06_RS02340 PF00472 RF-1 domain RD06_RS02340 PF03462 PCRF domain RD06_RS02345 PF05175 Methyltransferase small domain RD06_RS02345 PF17827 PrmC N-terminal domain RD06_RS02350 PF00462 Glutaredoxin RD06_RS02355 PF02441 Flavoprotein RD06_RS02360 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02365 PF09084 NMT1/THI5 like RD06_RS02370 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD06_RS02370 PF00941 FAD binding domain in molybdopterin dehydrogenase RD06_RS02375 PF01799 [2Fe-2S] binding domain RD06_RS02375 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS02380 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD06_RS02380 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD06_RS02400 PF05036 Sporulation related domain RD06_RS02400 PF03330 Lytic transglycolase RD06_RS02405 PF03668 P-loop ATPase protein family RD06_RS02415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD06_RS02415 PF00034 Cytochrome c RD06_RS02415 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD06_RS02420 PF02603 HPr Serine kinase N terminus RD06_RS02420 PF07475 HPr Serine kinase C-terminal domain RD06_RS02425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RD06_RS02430 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RD06_RS02435 PF00005 ABC transporter RD06_RS02455 PF00571 CBS domain RD06_RS02455 PF01380 SIS domain RD06_RS02460 PF01370 NAD dependent epimerase/dehydratase family RD06_RS02460 PF02222 ATP-grasp domain RD06_RS02465 PF07715 TonB-dependent Receptor Plug Domain RD06_RS02465 PF00593 TonB dependent receptor RD06_RS02475 PF05199 GMC oxidoreductase RD06_RS02475 PF00732 GMC oxidoreductase RD06_RS02495 PF01336 OB-fold nucleic acid binding domain RD06_RS02495 PF00152 tRNA synthetases class II (D, K and N) RD06_RS02495 PF02938 GAD domain RD06_RS02500 PF03372 Endonuclease/Exonuclease/phosphatase family RD06_RS02505 PF13091 PLD-like domain RD06_RS02530 PF13458 Periplasmic binding protein RD06_RS02535 PF01425 Amidase RD06_RS02540 PF05995 Cysteine dioxygenase type I RD06_RS02545 PF01614 Bacterial transcriptional regulator RD06_RS02545 PF09339 IclR helix-turn-helix domain RD06_RS02560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD06_RS02560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD06_RS02560 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS02565 PF05275 Copper resistance protein B precursor (CopB) RD06_RS02570 PF07732 Multicopper oxidase RD06_RS02570 PF07731 Multicopper oxidase RD06_RS02570 PF00394 Multicopper oxidase RD06_RS02600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD06_RS02600 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RD06_RS02600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD06_RS02605 PF02515 CoA-transferase family III RD06_RS02610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS02610 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS02610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS02625 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS02630 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS02635 PF01256 Carbohydrate kinase RD06_RS02655 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS02660 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS02660 PF12911 N-terminal TM domain of oligopeptide transport permease C RD06_RS02665 PF00005 ABC transporter RD06_RS02665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS02675 PF01546 Peptidase family M20/M25/M40 RD06_RS02675 PF07687 Peptidase dimerisation domain RD06_RS02685 PF00580 UvrD/REP helicase N-terminal domain RD06_RS02685 PF13361 UvrD-like helicase C-terminal domain RD06_RS02690 PF00271 Helicase conserved C-terminal domain RD06_RS02690 PF18074 Primosomal protein N C-terminal domain RD06_RS02690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RD06_RS02690 PF00270 DEAD/DEAH box helicase RD06_RS02690 PF17764 3′ DNA-binding domain (3′BD) RD06_RS02695 PF01208 Uroporphyrinogen decarboxylase (URO-D) RD06_RS02705 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RD06_RS02710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD06_RS02710 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD06_RS02715 PF00231 ATP synthase RD06_RS02720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD06_RS02720 PF00306 ATP synthase alpha/beta chain, C terminal domain RD06_RS02720 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD06_RS02725 PF00213 ATP synthase delta (OSCP) subunit RD06_RS02730 PF00430 ATP synthase B/B' CF(0) RD06_RS02735 PF00137 ATP synthase subunit C RD06_RS02740 PF00119 ATP synthase A chain RD06_RS02765 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS02770 PF17820 PDZ domain RD06_RS02770 PF13180 PDZ domain RD06_RS02775 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS02775 PF13192 Thioredoxin domain RD06_RS02785 PF01171 PP-loop family RD06_RS02795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD06_RS02795 PF01842 ACT domain RD06_RS02795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD06_RS02800 PF13098 Thioredoxin-like domain RD06_RS02800 PF10411 Disulfide bond isomerase protein N-terminus RD06_RS02805 PF01494 FAD binding domain RD06_RS02810 PF03562 MltA specific insert domain RD06_RS02810 PF06725 3D domain RD06_RS02815 PF04379 ApaG domain RD06_RS02820 PF00834 Ribulose-phosphate 3 epimerase family RD06_RS02825 PF13419 Haloacid dehalogenase-like hydrolase RD06_RS02830 PF04715 Anthranilate synthase component I, N terminal region RD06_RS02830 PF00425 chorismate binding enzyme RD06_RS02835 PF00117 Glutamine amidotransferase class-I RD06_RS02840 PF02885 Glycosyl transferase family, helical bundle domain RD06_RS02840 PF00591 Glycosyl transferase family, a/b domain RD06_RS02845 PF00218 Indole-3-glycerol phosphate synthase RD06_RS02870 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS02870 PF18158 Adaptive response protein AidB N-terminal domain RD06_RS02870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS02875 PF03466 LysR substrate binding domain RD06_RS02880 PF00551 Formyl transferase RD06_RS02890 PF01613 Flavin reductase like domain RD06_RS02895 PF01243 Pyridoxamine 5'-phosphate oxidase RD06_RS02895 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RD06_RS02905 PF07690 Major Facilitator Superfamily RD06_RS02910 PF00899 ThiF family RD06_RS02915 PF07702 UTRA domain RD06_RS02915 PF00392 Bacterial regulatory proteins, gntR family RD06_RS02920 PF00501 AMP-binding enzyme RD06_RS02920 PF13193 AMP-binding enzyme C-terminal domain RD06_RS02925 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS02940 PF01063 Amino-transferase class IV RD06_RS02945 PF04715 Anthranilate synthase component I, N terminal region RD06_RS02945 PF00425 chorismate binding enzyme RD06_RS02950 PF17760 UvrA interaction domain RD06_RS02950 PF00005 ABC transporter RD06_RS02950 PF17755 UvrA DNA-binding domain RD06_RS02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS02960 PF03466 LysR substrate binding domain RD06_RS02965 PF00535 Glycosyl transferase family 2 RD06_RS02970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS02975 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS02985 PF12848 ABC transporter RD06_RS02985 PF00005 ABC transporter RD06_RS03005 PF03776 Septum formation topological specificity factor MinE RD06_RS03010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RD06_RS03015 PF03775 Septum formation inhibitor MinC, C-terminal domain RD06_RS03015 PF05209 Septum formation inhibitor MinC, N-terminal domain RD06_RS03020 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD06_RS03020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RD06_RS03025 PF01654 Cytochrome bd terminal oxidase subunit I RD06_RS03035 PF02702 Osmosensitive K+ channel His kinase sensor domain RD06_RS03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS03035 PF13493 Domain of unknown function (DUF4118) RD06_RS03040 PF00072 Response regulator receiver domain RD06_RS03040 PF00486 Transcriptional regulatory protein, C terminal RD06_RS03055 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS03060 PF04391 Protein of unknown function (DUF533) RD06_RS03080 PF01464 Transglycosylase SLT domain RD06_RS03080 PF01476 LysM domain RD06_RS03085 PF00753 Metallo-beta-lactamase superfamily RD06_RS03085 PF16123 Hydroxyacylglutathione hydrolase C-terminus RD06_RS03090 PF08241 Methyltransferase domain RD06_RS03095 PF00075 RNase H RD06_RS03140 PF01575 MaoC like domain RD06_RS03145 PF02803 Thiolase, C-terminal domain RD06_RS03145 PF00108 Thiolase, N-terminal domain RD06_RS03155 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS03160 PF00106 short chain dehydrogenase RD06_RS03170 PF00005 ABC transporter RD06_RS03170 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS03175 PF00005 ABC transporter RD06_RS03180 PF02653 Branched-chain amino acid transport system / permease component RD06_RS03190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS03190 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS03190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS03195 PF08361 MAATS-type transcriptional repressor, C-terminal region RD06_RS03195 PF00440 Bacterial regulatory proteins, tetR family RD06_RS03200 PF00501 AMP-binding enzyme RD06_RS03200 PF14535 AMP-binding enzyme C-terminal domain RD06_RS03205 PF02515 CoA-transferase family III RD06_RS03225 PF04285 Protein of unknown function (DUF444) RD06_RS03230 PF04293 SpoVR like protein RD06_RS03245 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS03250 PF07476 Methylaspartate ammonia-lyase C-terminus RD06_RS03250 PF05034 Methylaspartate ammonia-lyase N-terminus RD06_RS03255 PF00392 Bacterial regulatory proteins, gntR family RD06_RS03255 PF07702 UTRA domain RD06_RS03270 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS03275 PF00376 MerR family regulatory protein RD06_RS03275 PF09278 MerR, DNA binding RD06_RS03280 PF01774 UreD urease accessory protein RD06_RS03285 PF00547 Urease, gamma subunit RD06_RS03290 PF04955 HupE / UreJ protein RD06_RS03295 PF00699 Urease beta subunit RD06_RS03300 PF00449 Urease alpha-subunit, N-terminal domain RD06_RS03300 PF01979 Amidohydrolase family RD06_RS03305 PF02814 UreE urease accessory protein, N-terminal domain RD06_RS03305 PF05194 UreE urease accessory protein, C-terminal domain RD06_RS03310 PF01730 UreF RD06_RS03315 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD06_RS03325 PF07364 Metallopeptidase family M81 RD06_RS03325 PF07171 MlrC C-terminus RD06_RS03335 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS03340 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS03345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS03350 PF00171 Aldehyde dehydrogenase family RD06_RS03355 PF00202 Aminotransferase class-III RD06_RS03360 PF00392 Bacterial regulatory proteins, gntR family RD06_RS03360 PF00155 Aminotransferase class I and II RD06_RS03365 PF00186 Dihydrofolate reductase RD06_RS03370 PF00303 Thymidylate synthase RD06_RS03380 PF03232 Ubiquinone biosynthesis protein COQ7 RD06_RS03385 PF00953 Glycosyl transferase family 4 RD06_RS03390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD06_RS03390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD06_RS03390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD06_RS03395 PF01370 NAD dependent epimerase/dehydratase family RD06_RS03400 PF03023 Lipid II flippase MurJ RD06_RS03405 PF00534 Glycosyl transferases group 1 RD06_RS03405 PF13439 Glycosyltransferase Family 4 RD06_RS03410 PF00733 Asparagine synthase RD06_RS03410 PF13537 Glutamine amidotransferase domain RD06_RS03415 PF13439 Glycosyltransferase Family 4 RD06_RS03415 PF00534 Glycosyl transferases group 1 RD06_RS03420 PF00534 Glycosyl transferases group 1 RD06_RS03420 PF13439 Glycosyltransferase Family 4 RD06_RS03425 PF13477 Glycosyl transferase 4-like RD06_RS03425 PF00534 Glycosyl transferases group 1 RD06_RS03430 PF00342 Phosphoglucose isomerase RD06_RS03435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD06_RS03435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD06_RS03435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD06_RS03435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD06_RS03445 PF02913 FAD linked oxidases, C-terminal domain RD06_RS03445 PF01565 FAD binding domain RD06_RS03450 PF00072 Response regulator receiver domain RD06_RS03450 PF00486 Transcriptional regulatory protein, C terminal RD06_RS03455 PF08521 Two-component sensor kinase N-terminal RD06_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS03455 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS03460 PF00884 Sulfatase RD06_RS03470 PF04209 homogentisate 1,2-dioxygenase RD06_RS03475 PF03466 LysR substrate binding domain RD06_RS03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS03485 PF01494 FAD binding domain RD06_RS03495 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RD06_RS03495 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RD06_RS03495 PF06827 Zinc finger found in FPG and IleRS RD06_RS03505 PF03550 Outer membrane lipoprotein LolB RD06_RS03510 PF00288 GHMP kinases N terminal domain RD06_RS03510 PF08544 GHMP kinases C terminal RD06_RS03520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RD06_RS03520 PF14572 Phosphoribosyl synthetase-associated domain RD06_RS03525 PF14693 Ribosomal protein TL5, C-terminal domain RD06_RS03525 PF01386 Ribosomal L25p family RD06_RS03530 PF01195 Peptidyl-tRNA hydrolase RD06_RS03540 PF01926 50S ribosome-binding GTPase RD06_RS03540 PF06071 Protein of unknown function (DUF933) RD06_RS03545 PF13356 Arm DNA-binding domain RD06_RS03545 PF00589 Phage integrase family RD06_RS03560 PF01555 DNA methylase RD06_RS03565 PF13175 AAA ATPase domain RD06_RS03590 PF00580 UvrD/REP helicase N-terminal domain RD06_RS03590 PF13361 UvrD-like helicase C-terminal domain RD06_RS03605 PF12951 Passenger-associated-transport-repeat RD06_RS03615 PF00486 Transcriptional regulatory protein, C terminal RD06_RS03615 PF00072 Response regulator receiver domain RD06_RS03630 PF00440 Bacterial regulatory proteins, tetR family RD06_RS03630 PF17938 Tetracyclin repressor-like, C-terminal domain RD06_RS03655 PF01266 FAD dependent oxidoreductase RD06_RS03670 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS03680 PF01810 LysE type translocator RD06_RS03725 PF00561 alpha/beta hydrolase fold RD06_RS03735 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS03740 PF03459 TOBE domain RD06_RS03740 PF00005 ABC transporter RD06_RS03745 PF13091 PLD-like domain RD06_RS03755 PF03167 Uracil DNA glycosylase superfamily RD06_RS03760 PF00270 DEAD/DEAH box helicase RD06_RS03760 PF00271 Helicase conserved C-terminal domain RD06_RS03770 PF12627 Probable RNA and SrmB- binding site of polymerase A RD06_RS03770 PF01743 Poly A polymerase head domain RD06_RS03775 PF14718 Soluble lytic murein transglycosylase L domain RD06_RS03775 PF01464 Transglycosylase SLT domain RD06_RS03785 PF07690 Major Facilitator Superfamily RD06_RS03785 PF00083 Sugar (and other) transporter RD06_RS03790 PF00850 Histone deacetylase domain RD06_RS03795 PF03466 LysR substrate binding domain RD06_RS03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS03805 PF02219 Methylenetetrahydrofolate reductase RD06_RS03810 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RD06_RS03815 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD06_RS03815 PF05221 S-adenosyl-L-homocysteine hydrolase RD06_RS03820 PF00534 Glycosyl transferases group 1 RD06_RS03820 PF13439 Glycosyltransferase Family 4 RD06_RS03830 PF02773 S-adenosylmethionine synthetase, C-terminal domain RD06_RS03830 PF00438 S-adenosylmethionine synthetase, N-terminal domain RD06_RS03830 PF02772 S-adenosylmethionine synthetase, central domain RD06_RS03840 PF03279 Bacterial lipid A biosynthesis acyltransferase RD06_RS03845 PF01678 Diaminopimelate epimerase RD06_RS03855 PF02899 Phage integrase, N-terminal SAM-like domain RD06_RS03855 PF00589 Phage integrase family RD06_RS03860 PF07715 TonB-dependent Receptor Plug Domain RD06_RS03860 PF00593 TonB dependent receptor RD06_RS03865 PF03824 High-affinity nickel-transport protein RD06_RS03875 PF01297 Zinc-uptake complex component A periplasmic RD06_RS03880 PF00950 ABC 3 transport family RD06_RS03885 PF00005 ABC transporter RD06_RS03895 PF01475 Ferric uptake regulator family RD06_RS03900 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD06_RS03900 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD06_RS03905 PF01258 Prokaryotic dksA/traR C4-type zinc finger RD06_RS03910 PF00227 Proteasome subunit RD06_RS03915 PF10431 C-terminal, D2-small domain, of ClpB protein RD06_RS03915 PF00004 ATPase family associated with various cellular activities (AAA) RD06_RS03915 PF07724 AAA domain (Cdc48 subfamily) RD06_RS03925 PF01923 Cobalamin adenosyltransferase RD06_RS03940 PF02525 Flavodoxin-like fold RD06_RS03945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD06_RS03945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD06_RS03955 PF01970 Tripartite tricarboxylate transporter TctA family RD06_RS03995 PF01790 Prolipoprotein diacylglyceryl transferase RD06_RS04000 PF00920 Dehydratase family RD06_RS04005 PF00034 Cytochrome c RD06_RS04010 PF01625 Peptide methionine sulfoxide reductase RD06_RS04015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD06_RS04020 PF01037 Lrp/AsnC ligand binding domain RD06_RS04060 PF07687 Peptidase dimerisation domain RD06_RS04060 PF01546 Peptidase family M20/M25/M40 RD06_RS04065 PF01979 Amidohydrolase family RD06_RS04070 PF00005 ABC transporter RD06_RS04070 PF12848 ABC transporter RD06_RS04070 PF16326 ABC transporter C-terminal domain RD06_RS04080 PF02381 MraZ protein, putative antitoxin-like RD06_RS04085 PF01795 MraW methylase family RD06_RS04090 PF04999 Cell division protein FtsL RD06_RS04095 PF03717 Penicillin-binding Protein dimerisation domain RD06_RS04095 PF00905 Penicillin binding protein transpeptidase domain RD06_RS04100 PF08245 Mur ligase middle domain RD06_RS04100 PF02875 Mur ligase family, glutamate ligase domain RD06_RS04105 PF00953 Glycosyl transferase family 4 RD06_RS04110 PF08245 Mur ligase middle domain RD06_RS04110 PF02875 Mur ligase family, glutamate ligase domain RD06_RS04115 PF01098 Cell cycle protein RD06_RS04120 PF04101 Glycosyltransferase family 28 C-terminal domain RD06_RS04120 PF03033 Glycosyltransferase family 28 N-terminal domain RD06_RS04125 PF08245 Mur ligase middle domain RD06_RS04125 PF02875 Mur ligase family, glutamate ligase domain RD06_RS04125 PF01225 Mur ligase family, catalytic domain RD06_RS04130 PF07478 D-ala D-ala ligase C-terminus RD06_RS04130 PF01820 D-ala D-ala ligase N-terminus RD06_RS04135 PF08478 POTRA domain, FtsQ-type RD06_RS04135 PF03799 Cell division protein FtsQ RD06_RS04140 PF02491 SHS2 domain inserted in FTSA RD06_RS04145 PF00091 Tubulin/FtsZ family, GTPase domain RD06_RS04145 PF12327 FtsZ family, C-terminal domain RD06_RS04150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RD06_RS04160 PF01476 LysM domain RD06_RS04160 PF08525 Opacity-associated protein A N-terminal motif RD06_RS04160 PF01551 Peptidase family M23 RD06_RS04165 PF01043 SecA preprotein cross-linking domain RD06_RS04165 PF07517 SecA DEAD-like domain RD06_RS04165 PF02810 SEC-C motif RD06_RS04165 PF07516 SecA Wing and Scaffold domain RD06_RS04175 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS04185 PF00106 short chain dehydrogenase RD06_RS04190 PF01266 FAD dependent oxidoreductase RD06_RS04195 PF01037 Lrp/AsnC ligand binding domain RD06_RS04205 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP RD06_RS04215 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RD06_RS04215 PF08501 Shikimate dehydrogenase substrate binding domain RD06_RS04215 PF01488 Shikimate / quinate 5-dehydrogenase RD06_RS04225 PF00773 RNB domain RD06_RS04230 PF05728 Uncharacterised protein family (UPF0227) RD06_RS04235 PF01225 Mur ligase family, catalytic domain RD06_RS04235 PF02875 Mur ligase family, glutamate ligase domain RD06_RS04235 PF08245 Mur ligase middle domain RD06_RS04240 PF08534 Redoxin RD06_RS04245 PF01220 Dehydroquinase class II RD06_RS04250 PF00364 Biotin-requiring enzyme RD06_RS04255 PF02785 Biotin carboxylase C-terminal domain RD06_RS04255 PF00289 Biotin carboxylase, N-terminal domain RD06_RS04255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD06_RS04270 PF00294 pfkB family carbohydrate kinase RD06_RS04295 PF03062 MBOAT, membrane-bound O-acyltransferase family RD06_RS04300 PF13193 AMP-binding enzyme C-terminal domain RD06_RS04300 PF00501 AMP-binding enzyme RD06_RS04315 PF00268 Ribonucleotide reductase, small chain RD06_RS04320 PF03477 ATP cone domain RD06_RS04320 PF00317 Ribonucleotide reductase, all-alpha domain RD06_RS04320 PF02867 Ribonucleotide reductase, barrel domain RD06_RS04335 PF01037 Lrp/AsnC ligand binding domain RD06_RS04350 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD06_RS04355 PF00583 Acetyltransferase (GNAT) family RD06_RS04355 PF13607 Succinyl-CoA ligase like flavodoxin domain RD06_RS04355 PF13380 CoA binding domain RD06_RS04365 PF07729 FCD domain RD06_RS04365 PF00392 Bacterial regulatory proteins, gntR family RD06_RS04375 PF00271 Helicase conserved C-terminal domain RD06_RS04375 PF03880 DbpA RNA binding domain RD06_RS04375 PF00270 DEAD/DEAH box helicase RD06_RS04380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD06_RS04385 PF00857 Isochorismatase family RD06_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS04395 PF00005 ABC transporter RD06_RS04405 PF02230 Phospholipase/Carboxylesterase RD06_RS04410 PF04751 Protein of unknown function (DUF615) RD06_RS04415 PF01523 Putative modulator of DNA gyrase RD06_RS04420 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS04425 PF00572 Ribosomal protein L13 RD06_RS04430 PF00380 Ribosomal protein S9/S16 RD06_RS04435 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD06_RS04435 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD06_RS04445 PF01521 Iron-sulphur cluster biosynthesis RD06_RS04450 PF03702 Anhydro-N-acetylmuramic acid kinase RD06_RS04455 PF01551 Peptidase family M23 RD06_RS04455 PF08460 Bacterial SH3 domain RD06_RS04465 PF01479 S4 domain RD06_RS04465 PF00579 tRNA synthetases class I (W and Y) RD06_RS04475 PF00464 Serine hydroxymethyltransferase RD06_RS04480 PF03477 ATP cone domain RD06_RS04495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD06_RS04495 PF01872 RibD C-terminal domain RD06_RS04510 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS04510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS04510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS04510 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS04510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS04510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS04520 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS04525 PF03466 LysR substrate binding domain RD06_RS04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS04530 PF02515 CoA-transferase family III RD06_RS04550 PF02678 Pirin RD06_RS04550 PF05726 Pirin C-terminal cupin domain RD06_RS04565 PF00072 Response regulator receiver domain RD06_RS04570 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD06_RS04570 PF06481 COX Aromatic Rich Motif RD06_RS04575 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD06_RS04580 PF00510 Cytochrome c oxidase subunit III RD06_RS04585 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RD06_RS04590 PF01022 Bacterial regulatory protein, arsR family RD06_RS04610 PF05114 Protein of unknown function (DUF692) RD06_RS04625 PF00593 TonB dependent receptor RD06_RS04625 PF07715 TonB-dependent Receptor Plug Domain RD06_RS04640 PF01476 LysM domain RD06_RS04640 PF01551 Peptidase family M23 RD06_RS04655 PF04461 Protein of unknown function (DUF520) RD06_RS04665 PF04542 Sigma-70 region 2 RD06_RS04665 PF08281 Sigma-70, region 4 RD06_RS04685 PF00795 Carbon-nitrogen hydrolase RD06_RS04690 PF01523 Putative modulator of DNA gyrase RD06_RS04695 PF00793 DAHP synthetase I family RD06_RS04700 PF13332 Hemagglutinin repeat RD06_RS04700 PF05860 haemagglutination activity domain RD06_RS04700 PF05594 Haemagluttinin repeat RD06_RS04700 PF13018 Extended Signal Peptide of Type V secretion system RD06_RS04700 PF13018 Extended Signal Peptide of Type V secretion system RD06_RS04700 PF13332 Hemagglutinin repeat RD06_RS04700 PF05594 Haemagluttinin repeat RD06_RS04700 PF05860 haemagglutination activity domain RD06_RS04705 PF02913 FAD linked oxidases, C-terminal domain RD06_RS04705 PF01565 FAD binding domain RD06_RS04710 PF01565 FAD binding domain RD06_RS04710 PF02913 FAD linked oxidases, C-terminal domain RD06_RS04715 PF01565 FAD binding domain RD06_RS04720 PF02754 Cysteine-rich domain RD06_RS04720 PF13183 4Fe-4S dicluster domain RD06_RS04725 PF00756 Putative esterase RD06_RS04730 PF07715 TonB-dependent Receptor Plug Domain RD06_RS04730 PF00593 TonB dependent receptor RD06_RS04740 PF02233 NAD(P) transhydrogenase beta subunit RD06_RS04745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RD06_RS04745 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD06_RS04755 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS04760 PF03466 LysR substrate binding domain RD06_RS04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS04770 PF01925 Sulfite exporter TauE/SafE RD06_RS04775 PF00043 Glutathione S-transferase, C-terminal domain RD06_RS04775 PF13417 Glutathione S-transferase, N-terminal domain RD06_RS04780 PF08328 Adenylosuccinate lyase C-terminal RD06_RS04780 PF00206 Lyase RD06_RS04785 PF01322 Cytochrome C' RD06_RS04805 PF01594 AI-2E family transporter RD06_RS04815 PF07729 FCD domain RD06_RS04815 PF00392 Bacterial regulatory proteins, gntR family RD06_RS04825 PF01425 Amidase RD06_RS04830 PF02515 CoA-transferase family III RD06_RS04835 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS04850 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS04855 PF00005 ABC transporter RD06_RS04870 PF01614 Bacterial transcriptional regulator RD06_RS04870 PF09339 IclR helix-turn-helix domain RD06_RS04880 PF00501 AMP-binding enzyme RD06_RS04880 PF13193 AMP-binding enzyme C-terminal domain RD06_RS04885 PF01042 Endoribonuclease L-PSP RD06_RS04890 PF02653 Branched-chain amino acid transport system / permease component RD06_RS04905 PF00005 ABC transporter RD06_RS04910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD06_RS04925 PF03466 LysR substrate binding domain RD06_RS04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS04935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD06_RS04940 PF07690 Major Facilitator Superfamily RD06_RS04945 PF03466 LysR substrate binding domain RD06_RS04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS04960 PF01425 Amidase RD06_RS04965 PF00677 Lumazine binding domain RD06_RS04970 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS04975 PF01037 Lrp/AsnC ligand binding domain RD06_RS04975 PF13404 AsnC-type helix-turn-helix domain RD06_RS04985 PF13193 AMP-binding enzyme C-terminal domain RD06_RS04985 PF00501 AMP-binding enzyme RD06_RS04995 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS05000 PF00005 ABC transporter RD06_RS05015 PF00107 Zinc-binding dehydrogenase RD06_RS05015 PF08240 Alcohol dehydrogenase GroES-like domain RD06_RS05035 PF00403 Heavy-metal-associated domain RD06_RS05040 PF01966 HD domain RD06_RS05045 PF00155 Aminotransferase class I and II RD06_RS05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS05050 PF03466 LysR substrate binding domain RD06_RS05060 PF00083 Sugar (and other) transporter RD06_RS05080 PF13609 Gram-negative porin RD06_RS05085 PF02548 Ketopantoate hydroxymethyltransferase RD06_RS05090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS05090 PF03466 LysR substrate binding domain RD06_RS05135 PF00440 Bacterial regulatory proteins, tetR family RD06_RS05145 PF05170 AsmA family RD06_RS05150 PF03352 Methyladenine glycosylase RD06_RS05155 PF00376 MerR family regulatory protein RD06_RS05155 PF09278 MerR, DNA binding RD06_RS05170 PF01547 Bacterial extracellular solute-binding protein RD06_RS05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS05180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD06_RS05185 PF08402 TOBE domain RD06_RS05185 PF00005 ABC transporter RD06_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS05195 PF14785 Maltose transport system permease protein MalF P2 domain RD06_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS05220 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS05225 PF07729 FCD domain RD06_RS05225 PF00392 Bacterial regulatory proteins, gntR family RD06_RS05250 PF00465 Iron-containing alcohol dehydrogenase RD06_RS05265 PF03180 NLPA lipoprotein RD06_RS05270 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS05275 PF00005 ABC transporter RD06_RS05275 PF09383 NIL domain RD06_RS05280 PF13802 Galactose mutarotase-like RD06_RS05280 PF01055 Glycosyl hydrolases family 31 RD06_RS05290 PF00459 Inositol monophosphatase family RD06_RS05300 PF00501 AMP-binding enzyme RD06_RS05300 PF13193 AMP-binding enzyme C-terminal domain RD06_RS05305 PF01546 Peptidase family M20/M25/M40 RD06_RS05305 PF07687 Peptidase dimerisation domain RD06_RS05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS05310 PF03466 LysR substrate binding domain RD06_RS05315 PF03601 Conserved hypothetical protein 698 RD06_RS05320 PF03061 Thioesterase superfamily RD06_RS05325 PF00571 CBS domain RD06_RS05325 PF01769 Divalent cation transporter RD06_RS05325 PF03448 MgtE intracellular N domain RD06_RS05345 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS05355 PF02609 Exonuclease VII small subunit RD06_RS05360 PF00348 Polyprenyl synthetase RD06_RS05365 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RD06_RS05365 PF02779 Transketolase, pyrimidine binding domain RD06_RS05365 PF02780 Transketolase, C-terminal domain RD06_RS05370 PF02649 Type I GTP cyclohydrolase folE2 RD06_RS05375 PF01250 Ribosomal protein S6 RD06_RS05385 PF01084 Ribosomal protein S18 RD06_RS05390 PF01281 Ribosomal protein L9, N-terminal domain RD06_RS05390 PF03948 Ribosomal protein L9, C-terminal domain RD06_RS05400 PF00772 DnaB-like helicase N terminal domain RD06_RS05400 PF03796 DnaB-like helicase C terminal domain RD06_RS05405 PF13593 SBF-like CPA transporter family (DUF4137) RD06_RS05410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD06_RS05420 PF00578 AhpC/TSA family RD06_RS05425 PF04430 Protein of unknown function (DUF498/DUF598) RD06_RS05430 PF00155 Aminotransferase class I and II RD06_RS05435 PF03447 Homoserine dehydrogenase, NAD binding domain RD06_RS05435 PF00742 Homoserine dehydrogenase RD06_RS05435 PF01842 ACT domain RD06_RS05440 PF00291 Pyridoxal-phosphate dependent enzyme RD06_RS05440 PF14821 Threonine synthase N terminus RD06_RS05455 PF02615 Malate/L-lactate dehydrogenase RD06_RS05465 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS05480 PF03328 HpcH/HpaI aldolase/citrate lyase family RD06_RS05485 PF01649 Ribosomal protein S20 RD06_RS05495 PF03023 Lipid II flippase MurJ RD06_RS05500 PF00106 short chain dehydrogenase RD06_RS05505 PF05191 Adenylate kinase, active site lid RD06_RS05510 PF02348 Cytidylyltransferase RD06_RS05515 PF03966 Trm112p-like protein RD06_RS05520 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RD06_RS05525 PF02472 Biopolymer transport protein ExbD/TolR RD06_RS05530 PF01618 MotA/TolQ/ExbB proton channel family RD06_RS05540 PF13742 OB-fold nucleic acid binding domain RD06_RS05540 PF02601 Exonuclease VII, large subunit RD06_RS05545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD06_RS05545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD06_RS05550 PF00654 Voltage gated chloride channel RD06_RS05555 PF02803 Thiolase, C-terminal domain RD06_RS05555 PF00108 Thiolase, N-terminal domain RD06_RS05565 PF00313 'Cold-shock' DNA-binding domain RD06_RS05570 PF02617 ATP-dependent Clp protease adaptor protein ClpS RD06_RS05575 PF07703 Alpha-2-macroglobulin bait region domain RD06_RS05575 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain RD06_RS05575 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain RD06_RS05575 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain RD06_RS05575 PF17962 Bacterial macroglobulin domain 6 RD06_RS05575 PF01835 MG2 domain RD06_RS05575 PF00207 Alpha-2-macroglobulin family RD06_RS05575 PF11974 Bacterial alpha-2-macroglobulin MG3 domain RD06_RS05580 PF00905 Penicillin binding protein transpeptidase domain RD06_RS05580 PF00912 Transglycosylase RD06_RS05580 PF06832 Penicillin-Binding Protein C-terminus Family RD06_RS05585 PF02861 Clp amino terminal domain, pathogenicity island component RD06_RS05585 PF17871 AAA lid domain RD06_RS05585 PF00004 ATPase family associated with various cellular activities (AAA) RD06_RS05585 PF07724 AAA domain (Cdc48 subfamily) RD06_RS05585 PF10431 C-terminal, D2-small domain, of ClpB protein RD06_RS05590 PF04403 Paraquat-inducible protein A RD06_RS05595 PF02470 MlaD protein RD06_RS05605 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RD06_RS05605 PF14850 DNA-binding domain of Proline dehydrogenase RD06_RS05605 PF01619 Proline dehydrogenase RD06_RS05605 PF00171 Aldehyde dehydrogenase family RD06_RS05615 PF13458 Periplasmic binding protein RD06_RS05620 PF02653 Branched-chain amino acid transport system / permease component RD06_RS05625 PF02653 Branched-chain amino acid transport system / permease component RD06_RS05625 PF11862 Domain of unknown function (DUF3382) RD06_RS05630 PF00005 ABC transporter RD06_RS05630 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS05635 PF00005 ABC transporter RD06_RS05640 PF07690 Major Facilitator Superfamily RD06_RS05645 PF00440 Bacterial regulatory proteins, tetR family RD06_RS05655 PF03797 Autotransporter beta-domain RD06_RS05655 PF03212 Pertactin RD06_RS05665 PF00543 Nitrogen regulatory protein P-II RD06_RS05670 PF04380 Membrane fusogenic activity RD06_RS05685 PF00083 Sugar (and other) transporter RD06_RS05685 PF07690 Major Facilitator Superfamily RD06_RS05695 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD06_RS05700 PF00510 Cytochrome c oxidase subunit III RD06_RS05705 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RD06_RS05710 PF02104 SURF1 family RD06_RS05735 PF13411 MerR HTH family regulatory protein RD06_RS05740 PF00403 Heavy-metal-associated domain RD06_RS05760 PF06968 Biotin and Thiamin Synthesis associated domain RD06_RS05760 PF04055 Radical SAM superfamily RD06_RS05775 PF08534 Redoxin RD06_RS05785 PF01738 Dienelactone hydrolase family RD06_RS05795 PF01967 MoaC family RD06_RS05805 PF02391 MoaE protein RD06_RS05810 PF00994 Probable molybdopterin binding domain RD06_RS05815 PF03454 MoeA C-terminal region (domain IV) RD06_RS05815 PF03453 MoeA N-terminal region (domain I and II) RD06_RS05815 PF00994 Probable molybdopterin binding domain RD06_RS05820 PF04055 Radical SAM superfamily RD06_RS05820 PF06463 Molybdenum Cofactor Synthesis C RD06_RS05840 PF00206 Lyase RD06_RS05840 PF14698 Argininosuccinate lyase C-terminal RD06_RS05845 PF00924 Mechanosensitive ion channel RD06_RS05850 PF02540 NAD synthase RD06_RS05850 PF00795 Carbon-nitrogen hydrolase RD06_RS05855 PF00543 Nitrogen regulatory protein P-II RD06_RS05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS05880 PF03466 LysR substrate binding domain RD06_RS05890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS05895 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS05900 PF12911 N-terminal TM domain of oligopeptide transport permease C RD06_RS05900 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS05905 PF03193 RsgA GTPase RD06_RS05910 PF01435 Peptidase family M48 RD06_RS05915 PF00929 Exonuclease RD06_RS05920 PF03853 YjeF-related protein N-terminus RD06_RS05925 PF08223 PaaX-like protein C-terminal domain RD06_RS05925 PF07848 PaaX-like protein RD06_RS05930 PF05138 Phenylacetic acid catabolic protein RD06_RS05935 PF06243 Phenylacetic acid degradation B RD06_RS05940 PF05138 Phenylacetic acid catabolic protein RD06_RS05945 PF01883 Iron-sulfur cluster assembly protein RD06_RS05950 PF00175 Oxidoreductase NAD-binding domain RD06_RS05950 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS05950 PF00970 Oxidoreductase FAD-binding domain RD06_RS05960 PF00171 Aldehyde dehydrogenase family RD06_RS05965 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS05970 PF03061 Thioesterase superfamily RD06_RS05975 PF00501 AMP-binding enzyme RD06_RS05975 PF14535 AMP-binding enzyme C-terminal domain RD06_RS05980 PF16970 Type-1 fimbrial protein, A RD06_RS05995 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS06000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD06_RS06000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS06005 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD06_RS06010 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RD06_RS06010 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RD06_RS06010 PF02769 AIR synthase related protein, C-terminal domain RD06_RS06015 PF13018 Extended Signal Peptide of Type V secretion system RD06_RS06015 PF05594 Haemagluttinin repeat RD06_RS06015 PF05860 haemagglutination activity domain RD06_RS06015 PF13332 Hemagglutinin repeat RD06_RS06040 PF00596 Class II Aldolase and Adducin N-terminal domain RD06_RS06045 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS06050 PF01242 6-pyruvoyl tetrahydropterin synthase RD06_RS06060 PF00472 RF-1 domain RD06_RS06080 PF00701 Dihydrodipicolinate synthetase family RD06_RS06085 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS06110 PF00890 FAD binding domain RD06_RS06110 PF14537 Cytochrome c3 RD06_RS06115 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS06130 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RD06_RS06130 PF01266 FAD dependent oxidoreductase RD06_RS06135 PF00455 DeoR C terminal sensor domain RD06_RS06135 PF08220 DeoR-like helix-turn-helix domain RD06_RS06140 PF00005 ABC transporter RD06_RS06140 PF17912 MalK OB fold domain RD06_RS06145 PF17912 MalK OB fold domain RD06_RS06145 PF00005 ABC transporter RD06_RS06155 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS06180 PF01037 Lrp/AsnC ligand binding domain RD06_RS06185 PF01266 FAD dependent oxidoreductase RD06_RS06190 PF00149 Calcineurin-like phosphoesterase RD06_RS06190 PF12320 Type 5 capsule protein repressor C-terminal domain RD06_RS06215 PF00196 Bacterial regulatory proteins, luxR family RD06_RS06215 PF00072 Response regulator receiver domain RD06_RS06235 PF00478 IMP dehydrogenase / GMP reductase domain RD06_RS06235 PF00571 CBS domain RD06_RS06240 PF00117 Glutamine amidotransferase class-I RD06_RS06240 PF00958 GMP synthase C terminal domain RD06_RS06240 PF02540 NAD synthase RD06_RS06250 PF13657 HipA N-terminal domain RD06_RS06250 PF07804 HipA-like C-terminal domain RD06_RS06260 PF07690 Major Facilitator Superfamily RD06_RS06275 PF01979 Amidohydrolase family RD06_RS06285 PF00005 ABC transporter RD06_RS06290 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS06315 PF01965 DJ-1/PfpI family RD06_RS06320 PF01740 STAS domain RD06_RS06320 PF00916 Sulfate permease family RD06_RS06325 PF10996 Beta-Casp domain RD06_RS06325 PF00753 Metallo-beta-lactamase superfamily RD06_RS06325 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RD06_RS06340 PF12706 Beta-lactamase superfamily domain RD06_RS06345 PF12833 Helix-turn-helix domain RD06_RS06345 PF01965 DJ-1/PfpI family RD06_RS06350 PF03466 LysR substrate binding domain RD06_RS06350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS06365 PF08240 Alcohol dehydrogenase GroES-like domain RD06_RS06365 PF00107 Zinc-binding dehydrogenase RD06_RS06370 PF07690 Major Facilitator Superfamily RD06_RS06375 PF00392 Bacterial regulatory proteins, gntR family RD06_RS06375 PF00155 Aminotransferase class I and II RD06_RS06385 PF01810 LysE type translocator RD06_RS06395 PF07687 Peptidase dimerisation domain RD06_RS06395 PF01546 Peptidase family M20/M25/M40 RD06_RS06400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS06410 PF12911 N-terminal TM domain of oligopeptide transport permease C RD06_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS06415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS06415 PF00005 ABC transporter RD06_RS06420 PF00356 Bacterial regulatory proteins, lacI family RD06_RS06445 PF09335 SNARE associated Golgi protein RD06_RS06455 PF13847 Methyltransferase domain RD06_RS06470 PF00155 Aminotransferase class I and II RD06_RS06470 PF00392 Bacterial regulatory proteins, gntR family RD06_RS06480 PF00692 dUTPase RD06_RS06490 PF01632 Ribosomal protein L35 RD06_RS06495 PF00453 Ribosomal protein L20 RD06_RS06500 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RD06_RS06500 PF01409 tRNA synthetases class II core domain (F) RD06_RS06505 PF03147 Ferredoxin-fold anticodon binding domain RD06_RS06505 PF03484 tRNA synthetase B5 domain RD06_RS06505 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RD06_RS06505 PF01588 Putative tRNA binding domain RD06_RS06505 PF03483 B3/4 domain RD06_RS06510 PF00216 Bacterial DNA-binding protein RD06_RS06560 PF04231 Endonuclease I RD06_RS06580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD06_RS06580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD06_RS06585 PF04381 Putative exonuclease, RdgC RD06_RS06595 PF02515 CoA-transferase family III RD06_RS06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS06600 PF03466 LysR substrate binding domain RD06_RS06620 PF00106 short chain dehydrogenase RD06_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS06635 PF08402 TOBE domain RD06_RS06635 PF00005 ABC transporter RD06_RS06640 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS06640 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD06_RS06640 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD06_RS06645 PF08946 Osmosensory transporter coiled coil RD06_RS06645 PF00083 Sugar (and other) transporter RD06_RS06650 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS06655 PF00486 Transcriptional regulatory protein, C terminal RD06_RS06655 PF00072 Response regulator receiver domain RD06_RS06660 PF00154 recA bacterial DNA recombination protein RD06_RS06665 PF02631 RecX family RD06_RS06670 PF03466 LysR substrate binding domain RD06_RS06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS06675 PF08267 Cobalamin-independent synthase, N-terminal domain RD06_RS06675 PF01717 Cobalamin-independent synthase, Catalytic domain RD06_RS06685 PF08442 ATP-grasp domain RD06_RS06685 PF00549 CoA-ligase RD06_RS06690 PF02629 CoA binding domain RD06_RS06690 PF00549 CoA-ligase RD06_RS06695 PF03741 Integral membrane protein TerC family RD06_RS06700 PF03741 Integral membrane protein TerC family RD06_RS06705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RD06_RS06705 PF03900 Porphobilinogen deaminase, C-terminal domain RD06_RS06725 PF00719 Inorganic pyrophosphatase RD06_RS06730 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD06_RS06765 PF00263 Bacterial type II and III secretion system protein RD06_RS06765 PF13629 Pilus formation protein N terminal region RD06_RS06765 PF04972 BON domain RD06_RS06770 PF00437 Type II/IV secretion system protein RD06_RS06790 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS06795 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD06_RS06795 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD06_RS06800 PF02615 Malate/L-lactate dehydrogenase RD06_RS06805 PF03466 LysR substrate binding domain RD06_RS06805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS06815 PF01266 FAD dependent oxidoreductase RD06_RS06820 PF04267 Sarcosine oxidase, delta subunit family RD06_RS06825 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS06825 PF17806 Sarcosine oxidase A3 domain RD06_RS06825 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD06_RS06825 PF01571 Aminomethyltransferase folate-binding domain RD06_RS06835 PF00551 Formyl transferase RD06_RS06840 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS06850 PF00561 alpha/beta hydrolase fold RD06_RS06860 PF01565 FAD binding domain RD06_RS06860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RD06_RS06865 PF05173 Dihydrodipicolinate reductase, C-terminus RD06_RS06865 PF01113 Dihydrodipicolinate reductase, N-terminus RD06_RS06870 PF04355 SmpA / OmlA family RD06_RS06875 PF01475 Ferric uptake regulator family RD06_RS06880 PF02463 RecF/RecN/SMC N terminal domain RD06_RS06885 PF01513 ATP-NAD kinase RD06_RS06890 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RD06_RS06890 PF01628 HrcA protein C terminal domain RD06_RS06895 PF00762 Ferrochelatase RD06_RS06905 PF01025 GrpE RD06_RS06915 PF00012 Hsp70 protein RD06_RS06920 PF00684 DnaJ central domain RD06_RS06920 PF00226 DnaJ domain RD06_RS06920 PF01556 DnaJ C terminal domain RD06_RS06925 PF00675 Insulinase (Peptidase family M16) RD06_RS06925 PF05193 Peptidase M16 inactive domain RD06_RS06945 PF01434 Peptidase family M41 RD06_RS06945 PF00004 ATPase family associated with various cellular activities (AAA) RD06_RS06945 PF17862 AAA+ lid domain RD06_RS06955 PF00034 Cytochrome c RD06_RS06970 PF00180 Isocitrate/isopropylmalate dehydrogenase RD06_RS06990 PF00072 Response regulator receiver domain RD06_RS06990 PF00486 Transcriptional regulatory protein, C terminal RD06_RS06995 PF13493 Domain of unknown function (DUF4118) RD06_RS06995 PF13492 GAF domain RD06_RS06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS06995 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS06995 PF02702 Osmosensitive K+ channel His kinase sensor domain RD06_RS07000 PF02669 K+-transporting ATPase, c chain RD06_RS07010 PF03814 Potassium-transporting ATPase A subunit RD06_RS07020 PF00474 Sodium:solute symporter family RD06_RS07030 PF00893 Small Multidrug Resistance protein RD06_RS07035 PF01713 Smr domain RD06_RS07035 PF00488 MutS domain V RD06_RS07040 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS07045 PF01580 FtsK/SpoIIIE family RD06_RS07045 PF09397 Ftsk gamma domain RD06_RS07045 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RD06_RS07045 PF17854 FtsK alpha domain RD06_RS07050 PF03548 Outer membrane lipoprotein carrier protein LolA RD06_RS07055 PF12002 MgsA AAA+ ATPase C terminal RD06_RS07055 PF00004 ATPase family associated with various cellular activities (AAA) RD06_RS07055 PF16193 AAA C-terminal domain RD06_RS07060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD06_RS07060 PF02403 Seryl-tRNA synthetase N-terminal domain RD06_RS07085 PF17151 Periplasmic sensor domain RD06_RS07085 PF00990 Diguanylate cyclase, GGDEF domain RD06_RS07100 PF00593 TonB dependent receptor RD06_RS07100 PF07715 TonB-dependent Receptor Plug Domain RD06_RS07100 PF07660 Secretin and TonB N terminus short domain RD06_RS07105 PF07690 Major Facilitator Superfamily RD06_RS07125 PF06276 Ferric iron reductase FhuF-like transporter RD06_RS07125 PF04183 IucA / IucC family RD06_RS07135 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RD06_RS07145 PF02254 TrkA-N domain RD06_RS07145 PF00999 Sodium/hydrogen exchanger family RD06_RS07150 PF00106 short chain dehydrogenase RD06_RS07160 PF03883 Peroxide stress protein YaaA RD06_RS07170 PF12805 FUSC-like inner membrane protein yccS RD06_RS07175 PF01510 N-acetylmuramoyl-L-alanine amidase RD06_RS07185 PF02545 Maf-like protein RD06_RS07190 PF02620 Large ribosomal RNA subunit accumulation protein YceD RD06_RS07195 PF01783 Ribosomal L32p protein family RD06_RS07200 PF02504 Fatty acid synthesis protein RD06_RS07205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD06_RS07205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD06_RS07210 PF00698 Acyl transferase domain RD06_RS07220 PF00550 Phosphopantetheine attachment site RD06_RS07225 PF02801 Beta-ketoacyl synthase, C-terminal domain RD06_RS07225 PF00109 Beta-ketoacyl synthase, N-terminal domain RD06_RS07235 PF04542 Sigma-70 region 2 RD06_RS07235 PF08281 Sigma-70, region 4 RD06_RS07250 PF13180 PDZ domain RD06_RS07255 PF00009 Elongation factor Tu GTP binding domain RD06_RS07255 PF00679 Elongation factor G C-terminus RD06_RS07255 PF06421 GTP-binding protein LepA C-terminus RD06_RS07255 PF03144 Elongation factor Tu domain 2 RD06_RS07260 PF10502 Signal peptidase, peptidase S26 RD06_RS07265 PF00035 Double-stranded RNA binding motif RD06_RS07265 PF14622 Ribonuclease-III-like RD06_RS07270 PF01926 50S ribosome-binding GTPase RD06_RS07270 PF07650 KH domain RD06_RS07275 PF11967 Recombination protein O N terminal RD06_RS07275 PF02565 Recombination protein O C terminal RD06_RS07285 PF00291 Pyridoxal-phosphate dependent enzyme RD06_RS07300 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS07305 PF01027 Inhibitor of apoptosis-promoting Bax1 RD06_RS07315 PF04364 DNA polymerase III chi subunit, HolC RD06_RS07320 PF02789 Cytosol aminopeptidase family, N-terminal domain RD06_RS07320 PF00883 Cytosol aminopeptidase family, catalytic domain RD06_RS07330 PF03466 LysR substrate binding domain RD06_RS07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS07340 PF00171 Aldehyde dehydrogenase family RD06_RS07345 PF03466 LysR substrate binding domain RD06_RS07345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS07360 PF00877 NlpC/P60 family RD06_RS07365 PF00501 AMP-binding enzyme RD06_RS07365 PF13193 AMP-binding enzyme C-terminal domain RD06_RS07365 PF16177 Acetyl-coenzyme A synthetase N-terminus RD06_RS07370 PF03928 Haem-degrading RD06_RS07380 PF13193 AMP-binding enzyme C-terminal domain RD06_RS07380 PF00501 AMP-binding enzyme RD06_RS07380 PF16177 Acetyl-coenzyme A synthetase N-terminus RD06_RS07385 PF00892 EamA-like transporter family RD06_RS07390 PF01212 Beta-eliminating lyase RD06_RS07405 PF16363 GDP-mannose 4,6 dehydratase RD06_RS07425 PF01144 Coenzyme A transferase RD06_RS07435 PF01112 Asparaginase RD06_RS07440 PF00005 ABC transporter RD06_RS07440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS07445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS07450 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS07455 PF12911 N-terminal TM domain of oligopeptide transport permease C RD06_RS07455 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS07460 PF03576 Peptidase family S58 RD06_RS07470 PF00557 Metallopeptidase family M24 RD06_RS07470 PF01321 Creatinase/Prolidase N-terminal domain RD06_RS07480 PF06418 CTP synthase N-terminus RD06_RS07480 PF00117 Glutamine amidotransferase class-I RD06_RS07485 PF00793 DAHP synthetase I family RD06_RS07495 PF03952 Enolase, N-terminal domain RD06_RS07495 PF00113 Enolase, C-terminal TIM barrel domain RD06_RS07500 PF04977 Septum formation initiator RD06_RS07505 PF00211 Adenylate and Guanylate cyclase catalytic domain RD06_RS07530 PF01430 Hsp33 protein RD06_RS07540 PF00501 AMP-binding enzyme RD06_RS07540 PF13193 AMP-binding enzyme C-terminal domain RD06_RS07540 PF16177 Acetyl-coenzyme A synthetase N-terminus RD06_RS07560 PF01170 Putative RNA methylase family UPF0020 RD06_RS07560 PF02926 THUMP domain RD06_RS07565 PF03653 Uncharacterised protein family (UPF0093) RD06_RS07570 PF03972 MmgE/PrpD family RD06_RS07575 PF04303 PrpF protein RD06_RS07580 PF00694 Aconitase C-terminal domain RD06_RS07580 PF00330 Aconitase family (aconitate hydratase) RD06_RS07585 PF00285 Citrate synthase, C-terminal domain RD06_RS07595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RD06_RS07595 PF00056 lactate/malate dehydrogenase, NAD binding domain RD06_RS07600 PF07702 UTRA domain RD06_RS07600 PF00392 Bacterial regulatory proteins, gntR family RD06_RS07605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD06_RS07610 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD06_RS07615 PF00890 FAD binding domain RD06_RS07615 PF02910 Fumarate reductase flavoprotein C-term RD06_RS07620 PF13085 2Fe-2S iron-sulfur cluster binding domain RD06_RS07625 PF03937 Flavinator of succinate dehydrogenase RD06_RS07630 PF00285 Citrate synthase, C-terminal domain RD06_RS07650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS07650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD06_RS07660 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS07680 PF13416 Bacterial extracellular solute-binding protein RD06_RS07685 PF00005 ABC transporter RD06_RS07685 PF08402 TOBE domain RD06_RS07690 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS07695 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS07705 PF02245 Methylpurine-DNA glycosylase (MPG) RD06_RS07715 PF02646 RmuC family RD06_RS07720 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS07720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS07720 PF18158 Adaptive response protein AidB N-terminal domain RD06_RS07725 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RD06_RS07730 PF01895 PhoU domain RD06_RS07735 PF04185 Phosphoesterase family RD06_RS07735 PF05506 Domain of unknown function (DUF756) RD06_RS07740 PF04362 Bacterial Fe(2+) trafficking RD06_RS07745 PF00583 Acetyltransferase (GNAT) family RD06_RS07745 PF00696 Amino acid kinase family RD06_RS07750 PF11898 Domain of unknown function (DUF3418) RD06_RS07750 PF00270 DEAD/DEAH box helicase RD06_RS07750 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RD06_RS07750 PF00271 Helicase conserved C-terminal domain RD06_RS07750 PF04408 Helicase associated domain (HA2) RD06_RS07760 PF07733 Bacterial DNA polymerase III alpha NTPase domain RD06_RS07760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RD06_RS07760 PF14579 Helix-hairpin-helix motif RD06_RS07760 PF02811 PHP domain RD06_RS07760 PF01336 OB-fold nucleic acid binding domain RD06_RS07765 PF13439 Glycosyltransferase Family 4 RD06_RS07765 PF00534 Glycosyl transferases group 1 RD06_RS07770 PF01522 Polysaccharide deacetylase RD06_RS07775 PF00535 Glycosyl transferase family 2 RD06_RS07780 PF00534 Glycosyl transferases group 1 RD06_RS07780 PF13439 Glycosyltransferase Family 4 RD06_RS07785 PF00884 Sulfatase RD06_RS07800 PF03692 Putative zinc- or iron-chelating domain RD06_RS07810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD06_RS07815 PF00005 ABC transporter RD06_RS07815 PF00664 ABC transporter transmembrane region RD06_RS07820 PF07690 Major Facilitator Superfamily RD06_RS07830 PF00800 Prephenate dehydratase RD06_RS07830 PF01842 ACT domain RD06_RS07835 PF10150 Ribonuclease E/G family RD06_RS07835 PF00575 S1 RNA binding domain RD06_RS07875 PF03212 Pertactin RD06_RS07875 PF03797 Autotransporter beta-domain RD06_RS07880 PF02545 Maf-like protein RD06_RS07885 PF02590 Predicted SPOUT methyltransferase RD06_RS07895 PF01467 Cytidylyltransferase-like RD06_RS07900 PF01218 Coproporphyrinogen III oxidase RD06_RS07905 PF02843 Phosphoribosylglycinamide synthetase, C domain RD06_RS07905 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD06_RS07905 PF02844 Phosphoribosylglycinamide synthetase, N domain RD06_RS07910 PF01709 Transcriptional regulator RD06_RS07915 PF05872 Bacterial protein of unknown function (DUF853) RD06_RS07920 PF01235 Sodium:alanine symporter family RD06_RS07925 PF00202 Aminotransferase class-III RD06_RS07930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD06_RS07935 PF00171 Aldehyde dehydrogenase family RD06_RS07945 PF07687 Peptidase dimerisation domain RD06_RS07945 PF01546 Peptidase family M20/M25/M40 RD06_RS07950 PF00850 Histone deacetylase domain RD06_RS07955 PF07883 Cupin domain RD06_RS07960 PF00202 Aminotransferase class-III RD06_RS07970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS07970 PF00005 ABC transporter RD06_RS07975 PF12911 N-terminal TM domain of oligopeptide transport permease C RD06_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS07980 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS07985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS07990 PF00392 Bacterial regulatory proteins, gntR family RD06_RS07990 PF00155 Aminotransferase class I and II RD06_RS07995 PF00180 Isocitrate/isopropylmalate dehydrogenase RD06_RS08000 PF07690 Major Facilitator Superfamily RD06_RS08005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD06_RS08005 PF00529 HlyD membrane-fusion protein of T1SS RD06_RS08015 PF01047 MarR family RD06_RS08025 PF00892 EamA-like transporter family RD06_RS08030 PF00107 Zinc-binding dehydrogenase RD06_RS08030 PF08240 Alcohol dehydrogenase GroES-like domain RD06_RS08035 PF01435 Peptidase family M48 RD06_RS08045 PF00581 Rhodanese-like domain RD06_RS08055 PF03466 LysR substrate binding domain RD06_RS08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS08060 PF08402 TOBE domain RD06_RS08060 PF00005 ABC transporter RD06_RS08065 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS08070 PF13419 Haloacid dehalogenase-like hydrolase RD06_RS08080 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS08100 PF00860 Permease family RD06_RS08105 PF00672 HAMP domain RD06_RS08105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD06_RS08105 PF02203 Tar ligand binding domain homologue RD06_RS08110 PF03449 Transcription elongation factor, N-terminal RD06_RS08110 PF01272 Transcription elongation factor, GreA/GreB, C-term RD06_RS08140 PF00771 FHIPEP family RD06_RS08205 PF01514 Secretory protein of YscJ/FliF family RD06_RS08215 PF02108 Flagellar assembly protein FliH RD06_RS08220 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD06_RS08220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD06_RS08220 PF18269 T3SS EscN ATPase C-terminal domain RD06_RS08235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD06_RS08240 PF00813 FliP family RD06_RS08245 PF01313 Bacterial export proteins, family 3 RD06_RS08250 PF01311 Bacterial export proteins, family 1 RD06_RS08255 PF01312 FlhB HrpN YscU SpaS Family RD06_RS08265 PF00263 Bacterial type II and III secretion system protein RD06_RS08265 PF03958 Bacterial type II/III secretion system short domain RD06_RS08270 PF08281 Sigma-70, region 4 RD06_RS08270 PF04542 Sigma-70 region 2 RD06_RS08295 PF07228 Stage II sporulation protein E (SpoIIE) RD06_RS08295 PF00672 HAMP domain RD06_RS08305 PF00842 Alanine racemase, C-terminal domain RD06_RS08305 PF01168 Alanine racemase, N-terminal domain RD06_RS08310 PF13581 Histidine kinase-like ATPase domain RD06_RS08315 PF01740 STAS domain RD06_RS08320 PF13396 Phospholipase_D-nuclease N-terminal RD06_RS08320 PF13091 PLD-like domain RD06_RS08330 PF03797 Autotransporter beta-domain RD06_RS08350 PF16868 NMT1-like family RD06_RS08355 PF00202 Aminotransferase class-III RD06_RS08365 PF12802 MarR family RD06_RS08370 PF00583 Acetyltransferase (GNAT) family RD06_RS08380 PF01205 Uncharacterized protein family UPF0029 RD06_RS08385 PF00085 Thioredoxin RD06_RS08395 PF00860 Permease family RD06_RS08400 PF00814 Glycoprotease family RD06_RS08410 PF02660 Glycerol-3-phosphate acyltransferase RD06_RS08415 PF01975 Survival protein SurE RD06_RS08425 PF01476 LysM domain RD06_RS08425 PF01551 Peptidase family M23 RD06_RS08445 PF05958 tRNA (Uracil-5-)-methyltransferase RD06_RS08450 PF00376 MerR family regulatory protein RD06_RS08450 PF09278 MerR, DNA binding RD06_RS08460 PF00462 Glutaredoxin RD06_RS08460 PF08534 Redoxin RD06_RS08465 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS08465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD06_RS08470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RD06_RS08475 PF03009 Glycerophosphoryl diester phosphodiesterase family RD06_RS08480 PF13145 PPIC-type PPIASE domain RD06_RS08485 PF13472 GDSL-like Lipase/Acylhydrolase family RD06_RS08490 PF00005 ABC transporter RD06_RS08500 PF04972 BON domain RD06_RS08510 PF05532 CsbD-like RD06_RS08515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD06_RS08515 PF02875 Mur ligase family, glutamate ligase domain RD06_RS08515 PF08245 Mur ligase middle domain RD06_RS08520 PF08443 RimK-like ATP-grasp domain RD06_RS08520 PF08245 Mur ligase middle domain RD06_RS08520 PF02875 Mur ligase family, glutamate ligase domain RD06_RS08540 PF04305 Protein of unknown function (DUF455) RD06_RS08545 PF13406 Transglycosylase SLT domain RD06_RS08560 PF01037 Lrp/AsnC ligand binding domain RD06_RS08570 PF04127 DNA / pantothenate metabolism flavoprotein RD06_RS08570 PF02441 Flavoprotein RD06_RS08575 PF01252 Signal peptidase (SPase) II RD06_RS08580 PF00133 tRNA synthetases class I (I, L, M and V) RD06_RS08580 PF08264 Anticodon-binding domain of tRNA RD06_RS08580 PF06827 Zinc finger found in FPG and IleRS RD06_RS08585 PF06574 FAD synthetase RD06_RS08585 PF01687 Riboflavin kinase RD06_RS08590 PF01189 16S rRNA methyltransferase RsmB/F RD06_RS08590 PF01029 NusB family RD06_RS08610 PF00580 UvrD/REP helicase N-terminal domain RD06_RS08610 PF13361 UvrD-like helicase C-terminal domain RD06_RS08615 PF07715 TonB-dependent Receptor Plug Domain RD06_RS08620 PF00005 ABC transporter RD06_RS08620 PF12848 ABC transporter RD06_RS08625 PF05175 Methyltransferase small domain RD06_RS08630 PF07687 Peptidase dimerisation domain RD06_RS08630 PF01546 Peptidase family M20/M25/M40 RD06_RS08635 PF14602 Hexapeptide repeat of succinyl-transferase RD06_RS08635 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RD06_RS08635 PF00132 Bacterial transferase hexapeptide (six repeats) RD06_RS08675 PF00313 'Cold-shock' DNA-binding domain RD06_RS08685 PF00313 'Cold-shock' DNA-binding domain RD06_RS08690 PF03350 Uncharacterized protein family, UPF0114 RD06_RS08695 PF05697 Bacterial trigger factor protein (TF) RD06_RS08695 PF05698 Bacterial trigger factor protein (TF) C-terminus RD06_RS08695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD06_RS08700 PF00574 Clp protease RD06_RS08705 PF07724 AAA domain (Cdc48 subfamily) RD06_RS08705 PF10431 C-terminal, D2-small domain, of ClpB protein RD06_RS08705 PF06689 ClpX C4-type zinc finger RD06_RS08710 PF05362 Lon protease (S16) C-terminal proteolytic domain RD06_RS08710 PF02190 ATP-dependent protease La (LON) substrate-binding domain RD06_RS08710 PF00004 ATPase family associated with various cellular activities (AAA) RD06_RS08715 PF03466 LysR substrate binding domain RD06_RS08715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS08720 PF02515 CoA-transferase family III RD06_RS08725 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS08730 PF01575 MaoC like domain RD06_RS08735 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS08745 PF02803 Thiolase, C-terminal domain RD06_RS08745 PF00108 Thiolase, N-terminal domain RD06_RS08755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS08755 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS08755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS08765 PF01144 Coenzyme A transferase RD06_RS08770 PF01144 Coenzyme A transferase RD06_RS08775 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS08795 PF03212 Pertactin RD06_RS08795 PF03797 Autotransporter beta-domain RD06_RS08800 PF00717 Peptidase S24-like RD06_RS08800 PF01726 LexA DNA binding domain RD06_RS08805 PF00155 Aminotransferase class I and II RD06_RS08810 PF17757 UvrB interaction domain RD06_RS08810 PF02151 UvrB/uvrC motif RD06_RS08810 PF04851 Type III restriction enzyme, res subunit RD06_RS08810 PF00271 Helicase conserved C-terminal domain RD06_RS08810 PF12344 Ultra-violet resistance protein B RD06_RS08815 PF01451 Low molecular weight phosphotyrosine protein phosphatase RD06_RS08820 PF02082 Transcriptional regulator RD06_RS08825 PF00266 Aminotransferase class-V RD06_RS08830 PF01592 NifU-like N terminal domain RD06_RS08835 PF01521 Iron-sulphur cluster biosynthesis RD06_RS08840 PF07743 HSCB C-terminal oligomerisation domain RD06_RS08845 PF00012 Hsp70 protein RD06_RS08850 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS08855 PF04384 Iron-sulphur cluster assembly RD06_RS08860 PF02142 MGS-like domain RD06_RS08870 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS08880 PF03812 2-keto-3-deoxygluconate permease RD06_RS08885 PF17042 Nucleotide-binding C-terminal domain RD06_RS08885 PF07005 Sugar-binding N-terminal domain RD06_RS08890 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD06_RS08905 PF02261 Aspartate decarboxylase RD06_RS08910 PF00175 Oxidoreductase NAD-binding domain RD06_RS08910 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS08910 PF00970 Oxidoreductase FAD-binding domain RD06_RS08915 PF01266 FAD dependent oxidoreductase RD06_RS08920 PF13416 Bacterial extracellular solute-binding protein RD06_RS08925 PF03466 LysR substrate binding domain RD06_RS08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS08940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS08945 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS08950 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS08955 PF00005 ABC transporter RD06_RS08955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS08960 PF01425 Amidase RD06_RS09005 PF02272 DHHA1 domain RD06_RS09005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD06_RS09005 PF01411 tRNA synthetases class II (A) RD06_RS09010 PF01206 Sulfurtransferase TusA RD06_RS09020 PF00886 Ribosomal protein S16 RD06_RS09025 PF01782 RimM N-terminal domain RD06_RS09030 PF01746 tRNA (Guanine-1)-methyltransferase RD06_RS09035 PF00266 Aminotransferase class-V RD06_RS09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS09055 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS09055 PF08521 Two-component sensor kinase N-terminal RD06_RS09060 PF00072 Response regulator receiver domain RD06_RS09060 PF00486 Transcriptional regulatory protein, C terminal RD06_RS09070 PF08264 Anticodon-binding domain of tRNA RD06_RS09070 PF10458 Valyl tRNA synthetase tRNA binding arm RD06_RS09070 PF00133 tRNA synthetases class I (I, L, M and V) RD06_RS09075 PF00334 Nucleoside diphosphate kinase RD06_RS09080 PF04055 Radical SAM superfamily RD06_RS09090 PF04551 GcpE protein RD06_RS09095 PF13393 Histidyl-tRNA synthetase RD06_RS09095 PF03129 Anticodon binding domain RD06_RS09100 PF09976 Tetratricopeptide repeat-like domain RD06_RS09105 PF13360 PQQ-like domain RD06_RS09110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RD06_RS09110 PF01926 50S ribosome-binding GTPase RD06_RS09115 PF00155 Aminotransferase class I and II RD06_RS09120 PF17209 Hfq protein RD06_RS09125 PF01926 50S ribosome-binding GTPase RD06_RS09125 PF13167 GTP-binding GTPase N-terminal RD06_RS09125 PF16360 GTP-binding GTPase Middle Region RD06_RS09130 PF01145 SPFH domain / Band 7 family RD06_RS09130 PF12221 Bacterial membrane protein N terminal RD06_RS09135 PF01145 SPFH domain / Band 7 family RD06_RS09140 PF13393 Histidyl-tRNA synthetase RD06_RS09145 PF00709 Adenylosuccinate synthetase RD06_RS09150 PF00156 Phosphoribosyl transferase domain RD06_RS09155 PF01165 Ribosomal protein S21 RD06_RS09160 PF08278 DNA primase DnaG DnaB-binding RD06_RS09160 PF08275 DNA primase catalytic core, N-terminal domain RD06_RS09160 PF10410 DnaB-helicase binding domain of primase RD06_RS09160 PF01807 CHC2 zinc finger RD06_RS09165 PF04546 Sigma-70, non-essential region RD06_RS09165 PF04545 Sigma-70, region 4 RD06_RS09165 PF04539 Sigma-70 region 3 RD06_RS09165 PF04542 Sigma-70 region 2 RD06_RS09165 PF03979 Sigma-70 factor, region 1.1 RD06_RS09165 PF00140 Sigma-70 factor, region 1.2 RD06_RS09195 PF01594 AI-2E family transporter RD06_RS09200 PF01061 ABC-2 type transporter RD06_RS09205 PF00005 ABC transporter RD06_RS09230 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RD06_RS09230 PF12801 4Fe-4S binding domain RD06_RS09230 PF13746 4Fe-4S dicluster domain RD06_RS09235 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RD06_RS09235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD06_RS09270 PF00202 Aminotransferase class-III RD06_RS09275 PF00155 Aminotransferase class I and II RD06_RS09285 PF13649 Methyltransferase domain RD06_RS09290 PF03788 LrgA family RD06_RS09295 PF04172 LrgB-like family RD06_RS09310 PF00158 Sigma-54 interaction domain RD06_RS09310 PF02954 Bacterial regulatory protein, Fis family RD06_RS09310 PF01590 GAF domain RD06_RS09315 PF00171 Aldehyde dehydrogenase family RD06_RS09330 PF04286 Protein of unknown function (DUF445) RD06_RS09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS09335 PF03466 LysR substrate binding domain RD06_RS09340 PF02567 Phenazine biosynthesis-like protein RD06_RS09345 PF07237 Protein of unknown function (DUF1428) RD06_RS09350 PF12833 Helix-turn-helix domain RD06_RS09350 PF02805 Metal binding domain of Ada RD06_RS09360 PF03625 Domain of unknown function DUF302 RD06_RS09360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RD06_RS09380 PF00916 Sulfate permease family RD06_RS09380 PF01740 STAS domain RD06_RS09395 PF02535 ZIP Zinc transporter RD06_RS09405 PF00664 ABC transporter transmembrane region RD06_RS09405 PF00005 ABC transporter RD06_RS09415 PF00583 Acetyltransferase (GNAT) family RD06_RS09430 PF07690 Major Facilitator Superfamily RD06_RS09450 PF12833 Helix-turn-helix domain RD06_RS09450 PF06719 AraC-type transcriptional regulator N-terminus RD06_RS09460 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD06_RS09465 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS09465 PF01799 [2Fe-2S] binding domain RD06_RS09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS09475 PF03466 LysR substrate binding domain RD06_RS09500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD06_RS09500 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS09525 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS09530 PF01522 Polysaccharide deacetylase RD06_RS09540 PF01425 Amidase RD06_RS09545 PF01425 Amidase RD06_RS09580 PF01152 Bacterial-like globin RD06_RS09600 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS09605 PF03466 LysR substrate binding domain RD06_RS09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS09610 PF12228 Protein of unknown function (DUF3604) RD06_RS09620 PF02803 Thiolase, C-terminal domain RD06_RS09620 PF00108 Thiolase, N-terminal domain RD06_RS09625 PF00501 AMP-binding enzyme RD06_RS09625 PF14535 AMP-binding enzyme C-terminal domain RD06_RS09630 PF07859 alpha/beta hydrolase fold RD06_RS09635 PF02515 CoA-transferase family III RD06_RS09640 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS09650 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS09655 PF00866 Ring hydroxylating beta subunit RD06_RS09660 PF00355 Rieske [2Fe-2S] domain RD06_RS09660 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD06_RS09665 PF13458 Periplasmic binding protein RD06_RS09670 PF02653 Branched-chain amino acid transport system / permease component RD06_RS09675 PF11862 Domain of unknown function (DUF3382) RD06_RS09675 PF02653 Branched-chain amino acid transport system / permease component RD06_RS09690 PF00463 Isocitrate lyase family RD06_RS09695 PF14489 QueF-like protein RD06_RS09695 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RD06_RS09710 PF01066 CDP-alcohol phosphatidyltransferase RD06_RS09715 PF01541 GIY-YIG catalytic domain RD06_RS09715 PF08459 UvrC Helix-hairpin-helix N-terminal RD06_RS09715 PF02151 UvrB/uvrC motif RD06_RS09720 PF00933 Glycosyl hydrolase family 3 N terminal domain RD06_RS09725 PF01648 4'-phosphopantetheinyl transferase superfamily RD06_RS09730 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RD06_RS09735 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RD06_RS09735 PF02321 Outer membrane efflux protein RD06_RS09740 PF00873 AcrB/AcrD/AcrF family RD06_RS09745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD06_RS09745 PF00529 HlyD membrane-fusion protein of T1SS RD06_RS09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS09765 PF03459 TOBE domain RD06_RS09770 PF00005 ABC transporter RD06_RS09785 PF00080 Copper/zinc superoxide dismutase (SODC) RD06_RS09790 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS09800 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS09810 PF07729 FCD domain RD06_RS09810 PF00392 Bacterial regulatory proteins, gntR family RD06_RS09820 PF02803 Thiolase, C-terminal domain RD06_RS09820 PF00108 Thiolase, N-terminal domain RD06_RS09825 PF01361 Tautomerase enzyme RD06_RS09830 PF00571 CBS domain RD06_RS09830 PF00005 ABC transporter RD06_RS09835 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS09860 PF07690 Major Facilitator Superfamily RD06_RS09865 PF00830 Ribosomal L28 family RD06_RS09870 PF00471 Ribosomal protein L33 RD06_RS09875 PF00916 Sulfate permease family RD06_RS09875 PF01740 STAS domain RD06_RS09895 PF01047 MarR family RD06_RS09900 PF07690 Major Facilitator Superfamily RD06_RS09905 PF08264 Anticodon-binding domain of tRNA RD06_RS09905 PF00133 tRNA synthetases class I (I, L, M and V) RD06_RS09905 PF13603 Leucyl-tRNA synthetase, Domain 2 RD06_RS09905 PF09334 tRNA synthetases class I (M) RD06_RS09920 PF00171 Aldehyde dehydrogenase family RD06_RS09930 PF01425 Amidase RD06_RS09935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD06_RS09935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD06_RS09980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS09980 PF03466 LysR substrate binding domain RD06_RS09990 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RD06_RS09990 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RD06_RS09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS09995 PF03466 LysR substrate binding domain RD06_RS10010 PF01925 Sulfite exporter TauE/SafE RD06_RS10015 PF00892 EamA-like transporter family RD06_RS10040 PF00330 Aconitase family (aconitate hydratase) RD06_RS10040 PF11791 Aconitate B N-terminal domain RD06_RS10040 PF06434 Aconitate hydratase 2 N-terminus RD06_RS10050 PF00691 OmpA family RD06_RS10065 PF07715 TonB-dependent Receptor Plug Domain RD06_RS10065 PF00593 TonB dependent receptor RD06_RS10075 PF00694 Aconitase C-terminal domain RD06_RS10075 PF00330 Aconitase family (aconitate hydratase) RD06_RS10080 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RD06_RS10095 PF01132 Elongation factor P (EF-P) OB domain RD06_RS10095 PF08207 Elongation factor P (EF-P) KOW-like domain RD06_RS10095 PF09285 Elongation factor P, C-terminal RD06_RS10100 PF00034 Cytochrome c RD06_RS10110 PF04542 Sigma-70 region 2 RD06_RS10110 PF08281 Sigma-70, region 4 RD06_RS10125 PF02954 Bacterial regulatory protein, Fis family RD06_RS10125 PF00072 Response regulator receiver domain RD06_RS10125 PF00158 Sigma-54 interaction domain RD06_RS10155 PF00437 Type II/IV secretion system protein RD06_RS10165 PF13629 Pilus formation protein N terminal region RD06_RS10165 PF04972 BON domain RD06_RS10165 PF00263 Bacterial type II and III secretion system protein RD06_RS10195 PF00563 EAL domain RD06_RS10195 PF00990 Diguanylate cyclase, GGDEF domain RD06_RS10195 PF03707 Bacterial signalling protein N terminal repeat RD06_RS10200 PF08479 POTRA domain, ShlB-type RD06_RS10200 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RD06_RS10215 PF01047 MarR family RD06_RS10220 PF00005 ABC transporter RD06_RS10220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS10225 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS10225 PF12911 N-terminal TM domain of oligopeptide transport permease C RD06_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS10235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS10245 PF01544 CorA-like Mg2+ transporter protein RD06_RS10250 PF13361 UvrD-like helicase C-terminal domain RD06_RS10250 PF00580 UvrD/REP helicase N-terminal domain RD06_RS10260 PF00392 Bacterial regulatory proteins, gntR family RD06_RS10260 PF00155 Aminotransferase class I and II RD06_RS10265 PF00202 Aminotransferase class-III RD06_RS10270 PF00171 Aldehyde dehydrogenase family RD06_RS10275 PF00459 Inositol monophosphatase family RD06_RS10280 PF02146 Sir2 family RD06_RS10290 PF00132 Bacterial transferase hexapeptide (six repeats) RD06_RS10295 PF00342 Phosphoglucose isomerase RD06_RS10300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD06_RS10300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD06_RS10300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD06_RS10300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD06_RS10315 PF12802 MarR family RD06_RS10335 PF14883 Hypothetical glycosyl hydrolase family 13 RD06_RS10335 PF01522 Polysaccharide deacetylase RD06_RS10340 PF00535 Glycosyl transferase family 2 RD06_RS10350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD06_RS10375 PF01042 Endoribonuclease L-PSP RD06_RS10380 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS10385 PF13380 CoA binding domain RD06_RS10390 PF09339 IclR helix-turn-helix domain RD06_RS10390 PF01614 Bacterial transcriptional regulator RD06_RS10395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD06_RS10395 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS10405 PF00005 ABC transporter RD06_RS10405 PF08402 TOBE domain RD06_RS10410 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS10415 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS10435 PF03466 LysR substrate binding domain RD06_RS10450 PF03447 Homoserine dehydrogenase, NAD binding domain RD06_RS10450 PF01958 Domain of unknown function DUF108 RD06_RS10455 PF00561 alpha/beta hydrolase fold RD06_RS10460 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS10465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS10470 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS10470 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD06_RS10475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD06_RS10475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD06_RS10500 PF00696 Amino acid kinase family RD06_RS10500 PF01842 ACT domain RD06_RS10500 PF13840 ACT domain RD06_RS10505 PF09179 TilS substrate binding domain RD06_RS10505 PF01171 PP-loop family RD06_RS10515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RD06_RS10520 PF06029 AlkA N-terminal domain RD06_RS10520 PF00730 HhH-GPD superfamily base excision DNA repair protein RD06_RS10520 PF02805 Metal binding domain of Ada RD06_RS10520 PF12833 Helix-turn-helix domain RD06_RS10525 PF01406 tRNA synthetases class I (C) catalytic domain RD06_RS10525 PF09190 DALR domain RD06_RS10535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RD06_RS10540 PF00149 Calcineurin-like phosphoesterase RD06_RS10545 PF02673 Bacitracin resistance protein BacA RD06_RS10550 PF03471 Transporter associated domain RD06_RS10550 PF03741 Integral membrane protein TerC family RD06_RS10555 PF00459 Inositol monophosphatase family RD06_RS10560 PF00588 SpoU rRNA Methylase family RD06_RS10565 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS10575 PF05552 Conserved TM helix RD06_RS10575 PF00924 Mechanosensitive ion channel RD06_RS10590 PF05378 Hydantoinase/oxoprolinase N-terminal region RD06_RS10590 PF01968 Hydantoinase/oxoprolinase RD06_RS10600 PF03466 LysR substrate binding domain RD06_RS10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS10625 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS10640 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RD06_RS10640 PF17287 POTRA domain RD06_RS10640 PF08479 POTRA domain, ShlB-type RD06_RS10645 PF00419 Fimbrial protein RD06_RS10650 PF00577 Outer membrane usher protein RD06_RS10650 PF13954 PapC N-terminal domain RD06_RS10650 PF13953 PapC C-terminal domain RD06_RS10655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RD06_RS10655 PF02753 Pili assembly chaperone PapD, C-terminal domain RD06_RS10660 PF16970 Type-1 fimbrial protein, A RD06_RS10665 PF05860 haemagglutination activity domain RD06_RS10665 PF13332 Hemagglutinin repeat RD06_RS10665 PF05594 Haemagluttinin repeat RD06_RS10665 PF13018 Extended Signal Peptide of Type V secretion system RD06_RS10670 PF00196 Bacterial regulatory proteins, luxR family RD06_RS10670 PF00072 Response regulator receiver domain RD06_RS10675 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS10675 PF01627 Hpt domain RD06_RS10675 PF00989 PAS fold RD06_RS10675 PF00072 Response regulator receiver domain RD06_RS10675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS10675 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS10685 PF07286 Protein of unknown function (DUF1445) RD06_RS10690 PF01425 Amidase RD06_RS10710 PF04343 Protein of unknown function, DUF488 RD06_RS10720 PF00392 Bacterial regulatory proteins, gntR family RD06_RS10720 PF07729 FCD domain RD06_RS10725 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS10725 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD06_RS10735 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD06_RS10735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS10745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS10745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS10745 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS10750 PF01546 Peptidase family M20/M25/M40 RD06_RS10750 PF07687 Peptidase dimerisation domain RD06_RS10755 PF00171 Aldehyde dehydrogenase family RD06_RS10760 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD06_RS10760 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD06_RS10765 PF00491 Arginase family RD06_RS10770 PF00005 ABC transporter RD06_RS10780 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS10795 PF01026 TatD related DNase RD06_RS10800 PF12169 DNA polymerase III subunits gamma and tau domain III RD06_RS10805 PF02223 Thymidylate kinase RD06_RS10810 PF02618 YceG-like family RD06_RS10815 PF01571 Aminomethyltransferase folate-binding domain RD06_RS10830 PF01266 FAD dependent oxidoreductase RD06_RS10835 PF02082 Transcriptional regulator RD06_RS10840 PF00042 Globin RD06_RS10840 PF00970 Oxidoreductase FAD-binding domain RD06_RS10840 PF00175 Oxidoreductase NAD-binding domain RD06_RS10870 PF00005 ABC transporter RD06_RS10875 PF00005 ABC transporter RD06_RS10875 PF12848 ABC transporter RD06_RS10880 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS10890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS10895 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS10900 PF17676 LD-carboxypeptidase C-terminal domain RD06_RS10900 PF02016 LD-carboxypeptidase N-terminal domain RD06_RS10905 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD06_RS10930 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RD06_RS10935 PF01899 Na+/H+ ion antiporter subunit RD06_RS10940 PF00361 Proton-conducting membrane transporter RD06_RS10945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD06_RS10950 PF00361 Proton-conducting membrane transporter RD06_RS10950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD06_RS10950 PF13244 Domain of unknown function (DUF4040) RD06_RS10950 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RD06_RS10955 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS10970 PF03466 LysR substrate binding domain RD06_RS10980 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS11005 PF03358 NADPH-dependent FMN reductase RD06_RS11030 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS11035 PF03466 LysR substrate binding domain RD06_RS11040 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS11055 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD06_RS11060 PF01070 FMN-dependent dehydrogenase RD06_RS11070 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS11080 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD06_RS11085 PF00043 Glutathione S-transferase, C-terminal domain RD06_RS11085 PF02798 Glutathione S-transferase, N-terminal domain RD06_RS11090 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system RD06_RS11095 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA RD06_RS11100 PF00082 Subtilase family RD06_RS11100 PF03797 Autotransporter beta-domain RD06_RS11100 PF12951 Passenger-associated-transport-repeat RD06_RS11105 PF00072 Response regulator receiver domain RD06_RS11105 PF00196 Bacterial regulatory proteins, luxR family RD06_RS11130 PF00884 Sulfatase RD06_RS11160 PF07726 ATPase family associated with various cellular activities (AAA) RD06_RS11160 PF17863 AAA lid domain RD06_RS11175 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS11185 PF03741 Integral membrane protein TerC family RD06_RS11195 PF11862 Domain of unknown function (DUF3382) RD06_RS11195 PF02653 Branched-chain amino acid transport system / permease component RD06_RS11200 PF00005 ABC transporter RD06_RS11200 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS11205 PF00005 ABC transporter RD06_RS11215 PF14759 Reductase C-terminal RD06_RS11215 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS11230 PF00106 short chain dehydrogenase RD06_RS11240 PF05159 Capsule polysaccharide biosynthesis protein RD06_RS11245 PF05159 Capsule polysaccharide biosynthesis protein RD06_RS11250 PF01370 NAD dependent epimerase/dehydratase family RD06_RS11255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD06_RS11255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD06_RS11255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD06_RS11260 PF02563 Polysaccharide biosynthesis/export protein RD06_RS11270 PF00534 Glycosyl transferases group 1 RD06_RS11280 PF00005 ABC transporter RD06_RS11305 PF00210 Ferritin-like domain RD06_RS11310 PF00171 Aldehyde dehydrogenase family RD06_RS11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS11315 PF03466 LysR substrate binding domain RD06_RS11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS11320 PF03466 LysR substrate binding domain RD06_RS11325 PF17191 RecG wedge domain RD06_RS11325 PF00271 Helicase conserved C-terminal domain RD06_RS11325 PF00270 DEAD/DEAH box helicase RD06_RS11330 PF01042 Endoribonuclease L-PSP RD06_RS11340 PF00248 Aldo/keto reductase family RD06_RS11350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS11350 PF03466 LysR substrate binding domain RD06_RS11355 PF00175 Oxidoreductase NAD-binding domain RD06_RS11355 PF00970 Oxidoreductase FAD-binding domain RD06_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS11370 PF00005 ABC transporter RD06_RS11370 PF08402 TOBE domain RD06_RS11380 PF02678 Pirin RD06_RS11380 PF05726 Pirin C-terminal cupin domain RD06_RS11385 PF17954 Quercetinase C-terminal cupin domain RD06_RS11385 PF02678 Pirin RD06_RS11390 PF03466 LysR substrate binding domain RD06_RS11390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS11395 PF00072 Response regulator receiver domain RD06_RS11395 PF02954 Bacterial regulatory protein, Fis family RD06_RS11395 PF00158 Sigma-54 interaction domain RD06_RS11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS11400 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS11400 PF00989 PAS fold RD06_RS11405 PF00120 Glutamine synthetase, catalytic domain RD06_RS11405 PF03951 Glutamine synthetase, beta-Grasp domain RD06_RS11410 PF04055 Radical SAM superfamily RD06_RS11410 PF06969 HemN C-terminal domain RD06_RS11420 PF01725 Ham1 family RD06_RS11425 PF00563 EAL domain RD06_RS11425 PF17154 Gammaproteobacterial periplasmic sensor domain RD06_RS11425 PF00990 Diguanylate cyclase, GGDEF domain RD06_RS11425 PF00672 HAMP domain RD06_RS11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS11440 PF03466 LysR substrate binding domain RD06_RS11450 PF01138 3' exoribonuclease family, domain 1 RD06_RS11450 PF03725 3' exoribonuclease family, domain 2 RD06_RS11455 PF08340 Domain of unknown function (DUF1732) RD06_RS11455 PF03755 YicC-like family, N-terminal region RD06_RS11475 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RD06_RS11475 PF01048 Phosphorylase superfamily RD06_RS11480 PF00877 NlpC/P60 family RD06_RS11490 PF00034 Cytochrome c RD06_RS11495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD06_RS11500 PF00625 Guanylate kinase RD06_RS11505 PF01192 RNA polymerase Rpb6 RD06_RS11510 PF13291 ACT domain RD06_RS11510 PF02824 TGS domain RD06_RS11510 PF04607 Region found in RelA / SpoT proteins RD06_RS11515 PF00005 ABC transporter RD06_RS11520 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS11525 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS11535 PF02163 Peptidase family M50 RD06_RS11540 PF00701 Dihydrodipicolinate synthetase family RD06_RS11545 PF06804 NlpB/DapX lipoprotein RD06_RS11550 PF16970 Type-1 fimbrial protein, A RD06_RS11555 PF08007 Cupin superfamily protein RD06_RS11560 PF05192 MutS domain III RD06_RS11560 PF05188 MutS domain II RD06_RS11560 PF01624 MutS domain I RD06_RS11560 PF05190 MutS family domain IV RD06_RS11560 PF00488 MutS domain V RD06_RS11565 PF07311 Dodecin RD06_RS11570 PF03358 NADPH-dependent FMN reductase RD06_RS11605 PF01300 Telomere recombination RD06_RS11610 PF04228 Putative neutral zinc metallopeptidase RD06_RS11630 PF02132 RecR protein RD06_RS11630 PF13662 Toprim domain RD06_RS11635 PF02575 YbaB/EbfC DNA-binding family RD06_RS11640 PF12169 DNA polymerase III subunits gamma and tau domain III RD06_RS11640 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RD06_RS11640 PF12170 DNA polymerase III tau subunit V interacting with alpha RD06_RS11650 PF00580 UvrD/REP helicase N-terminal domain RD06_RS11650 PF12705 PD-(D/E)XK nuclease superfamily RD06_RS11650 PF13361 UvrD-like helicase C-terminal domain RD06_RS11660 PF07690 Major Facilitator Superfamily RD06_RS11670 PF00768 D-alanyl-D-alanine carboxypeptidase RD06_RS11685 PF01174 SNO glutamine amidotransferase family RD06_RS11690 PF04073 Aminoacyl-tRNA editing domain RD06_RS11695 PF00589 Phage integrase family RD06_RS11695 PF02899 Phage integrase, N-terminal SAM-like domain RD06_RS11700 PF03466 LysR substrate binding domain RD06_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS11705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS11705 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS11705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS11710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS11710 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS11710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS11720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS11720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS11725 PF00005 ABC transporter RD06_RS11730 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS11735 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS11740 PF00491 Arginase family RD06_RS11745 PF01614 Bacterial transcriptional regulator RD06_RS11745 PF09339 IclR helix-turn-helix domain RD06_RS11750 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS11755 PF01300 Telomere recombination RD06_RS11755 PF03481 Putative GTP-binding controlling metal-binding RD06_RS11760 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RD06_RS11760 PF02222 ATP-grasp domain RD06_RS11765 PF00731 AIR carboxylase RD06_RS11770 PF02600 Disulfide bond formation protein DsbB RD06_RS11775 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA RD06_RS11780 PF15723 Motility quorum-sensing regulator, toxin of MqsA RD06_RS11785 PF01259 SAICAR synthetase RD06_RS11795 PF01116 Fructose-bisphosphate aldolase class-II RD06_RS11810 PF03069 Acetamidase/Formamidase family RD06_RS11815 PF02293 AmiS/UreI family transporter RD06_RS11825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD06_RS11825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD06_RS11840 PF00005 ABC transporter RD06_RS11845 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS11850 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS11855 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS11865 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD06_RS11875 PF02896 PEP-utilising enzyme, TIM barrel domain RD06_RS11875 PF00391 PEP-utilising enzyme, mobile domain RD06_RS11875 PF05524 PEP-utilising enzyme, N-terminal RD06_RS11880 PF00381 PTS HPr component phosphorylation site RD06_RS11890 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RD06_RS11890 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RD06_RS11895 PF00707 Translation initiation factor IF-3, C-terminal domain RD06_RS11895 PF05198 Translation initiation factor IF-3, N-terminal domain RD06_RS11900 PF02824 TGS domain RD06_RS11900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD06_RS11900 PF03129 Anticodon binding domain RD06_RS11900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD06_RS11905 PF00196 Bacterial regulatory proteins, luxR family RD06_RS11915 PF04055 Radical SAM superfamily RD06_RS11915 PF06969 HemN C-terminal domain RD06_RS11925 PF00990 Diguanylate cyclase, GGDEF domain RD06_RS11935 PF12805 FUSC-like inner membrane protein yccS RD06_RS11945 PF03883 Peroxide stress protein YaaA RD06_RS11960 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RD06_RS11965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS11975 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS11980 PF01416 tRNA pseudouridine synthase RD06_RS11990 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD06_RS11990 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD06_RS11995 PF00180 Isocitrate/isopropylmalate dehydrogenase RD06_RS12000 PF00694 Aconitase C-terminal domain RD06_RS12005 PF00330 Aconitase family (aconitate hydratase) RD06_RS12010 PF12849 PBP superfamily domain RD06_RS12015 PF00005 ABC transporter RD06_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS12045 PF13247 4Fe-4S dicluster domain RD06_RS12050 PF00384 Molybdopterin oxidoreductase RD06_RS12050 PF01568 Molydopterin dinucleotide binding domain RD06_RS12050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD06_RS12080 PF10609 NUBPL iron-transfer P-loop NTPase RD06_RS12085 PF12804 MobA-like NTP transferase domain RD06_RS12090 PF03453 MoeA N-terminal region (domain I and II) RD06_RS12090 PF03454 MoeA C-terminal region (domain IV) RD06_RS12090 PF00994 Probable molybdopterin binding domain RD06_RS12095 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RD06_RS12100 PF01435 Peptidase family M48 RD06_RS12105 PF01264 Chorismate synthase RD06_RS12110 PF08448 PAS fold RD06_RS12110 PF08447 PAS fold RD06_RS12110 PF00563 EAL domain RD06_RS12110 PF00990 Diguanylate cyclase, GGDEF domain RD06_RS12125 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS12130 PF00005 ABC transporter RD06_RS12130 PF08402 TOBE domain RD06_RS12135 PF03466 LysR substrate binding domain RD06_RS12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS12140 PF00300 Histidine phosphatase superfamily (branch 1) RD06_RS12150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD06_RS12150 PF02142 MGS-like domain RD06_RS12150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD06_RS12155 PF00117 Glutamine amidotransferase class-I RD06_RS12155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RD06_RS12160 PF00923 Transaldolase/Fructose-6-phosphate aldolase RD06_RS12185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD06_RS12185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD06_RS12190 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS12195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS12195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS12195 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS12200 PF03658 RnfH family Ubiquitin RD06_RS12205 PF03364 Polyketide cyclase / dehydrase and lipid transport RD06_RS12215 PF01668 SmpB protein RD06_RS12220 PF00990 Diguanylate cyclase, GGDEF domain RD06_RS12220 PF08448 PAS fold RD06_RS12225 PF01145 SPFH domain / Band 7 family RD06_RS12225 PF16200 C-terminal region of band_7 RD06_RS12240 PF00117 Glutamine amidotransferase class-I RD06_RS12240 PF00958 GMP synthase C terminal domain RD06_RS12245 PF00391 PEP-utilising enzyme, mobile domain RD06_RS12245 PF02896 PEP-utilising enzyme, TIM barrel domain RD06_RS12245 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RD06_RS12250 PF03618 Kinase/pyrophosphorylase RD06_RS12255 PF00588 SpoU rRNA Methylase family RD06_RS12255 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD06_RS12260 PF01351 Ribonuclease HII RD06_RS12265 PF02684 Lipid-A-disaccharide synthetase RD06_RS12270 PF00132 Bacterial transferase hexapeptide (six repeats) RD06_RS12270 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RD06_RS12275 PF07977 FabA-like domain RD06_RS12280 PF00132 Bacterial transferase hexapeptide (six repeats) RD06_RS12280 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RD06_RS12285 PF03938 Outer membrane protein (OmpH-like) RD06_RS12290 PF07244 Surface antigen variable number repeat RD06_RS12290 PF01103 Surface antigen RD06_RS12295 PF17820 PDZ domain RD06_RS12295 PF02163 Peptidase family M50 RD06_RS12300 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RD06_RS12300 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD06_RS12300 PF13288 DXP reductoisomerase C-terminal domain RD06_RS12310 PF01255 Putative undecaprenyl diphosphate synthase RD06_RS12315 PF01765 Ribosome recycling factor RD06_RS12320 PF00696 Amino acid kinase family RD06_RS12325 PF00889 Elongation factor TS RD06_RS12330 PF00318 Ribosomal protein S2 RD06_RS12335 PF00557 Metallopeptidase family M24 RD06_RS12340 PF01909 Nucleotidyltransferase domain RD06_RS12340 PF01966 HD domain RD06_RS12340 PF08335 GlnD PII-uridylyltransferase RD06_RS12355 PF00156 Phosphoribosyl transferase domain RD06_RS12370 PF02875 Mur ligase family, glutamate ligase domain RD06_RS12370 PF08245 Mur ligase middle domain RD06_RS12380 PF07196 Flagellin hook IN motif RD06_RS12380 PF07195 Flagellar hook-associated protein 2 C-terminus RD06_RS12380 PF02465 Flagellar hook-associated protein 2 N-terminus RD06_RS12385 PF02561 Flagellar protein FliS RD06_RS12410 PF01312 FlhB HrpN YscU SpaS Family RD06_RS12420 PF02049 Flagellar hook-basal body complex protein FliE RD06_RS12425 PF08345 Flagellar M-ring protein C-terminal RD06_RS12425 PF01514 Secretory protein of YscJ/FliF family RD06_RS12430 PF01706 FliG C-terminal domain RD06_RS12430 PF14842 FliG N-terminal domain RD06_RS12430 PF14841 FliG middle domain RD06_RS12440 PF18269 T3SS EscN ATPase C-terminal domain RD06_RS12440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD06_RS12465 PF03748 Flagellar basal body-associated protein FliL RD06_RS12470 PF02154 Flagellar motor switch protein FliM RD06_RS12470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD06_RS12475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD06_RS12475 PF16973 Flagellar motor switch protein FliN N-terminal RD06_RS12480 PF04347 Flagellar biosynthesis protein, FliO RD06_RS12485 PF00813 FliP family RD06_RS12490 PF01313 Bacterial export proteins, family 3 RD06_RS12495 PF01311 Bacterial export proteins, family 1 RD06_RS12505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD06_RS12505 PF08447 PAS fold RD06_RS12510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD06_RS12510 PF02203 Tar ligand binding domain homologue RD06_RS12510 PF00672 HAMP domain RD06_RS12515 PF00672 HAMP domain RD06_RS12515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD06_RS12515 PF02203 Tar ligand binding domain homologue RD06_RS12520 PF00669 Bacterial flagellin N-terminal helical region RD06_RS12525 PF00460 Flagella basal body rod protein RD06_RS12525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD06_RS12530 PF10135 Rod binding protein RD06_RS12530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RD06_RS12535 PF02119 Flagellar P-ring protein RD06_RS12540 PF02107 Flagellar L-ring protein RD06_RS12545 PF00460 Flagella basal body rod protein RD06_RS12545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD06_RS12550 PF00460 Flagella basal body rod protein RD06_RS12550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD06_RS12555 PF07559 Flagellar basal body protein FlaE RD06_RS12555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD06_RS12555 PF00460 Flagella basal body rod protein RD06_RS12560 PF13860 FlgD Ig-like domain RD06_RS12560 PF13861 FlgD Tudor-like domain RD06_RS12560 PF03963 Flagellar hook capping protein - N-terminal region RD06_RS12565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD06_RS12565 PF00460 Flagella basal body rod protein RD06_RS12570 PF00460 Flagella basal body rod protein RD06_RS12580 PF04316 Anti-sigma-28 factor, FlgM RD06_RS12590 PF00448 SRP54-type protein, GTPase domain RD06_RS12600 PF01312 FlhB HrpN YscU SpaS Family RD06_RS12610 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS12615 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS12620 PF00005 ABC transporter RD06_RS12630 PF02558 Ketopantoate reductase PanE/ApbA RD06_RS12630 PF08546 Ketopantoate reductase PanE/ApbA C terminal RD06_RS12635 PF13378 Enolase C-terminal domain-like RD06_RS12640 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS12650 PF00694 Aconitase C-terminal domain RD06_RS12655 PF00356 Bacterial regulatory proteins, lacI family RD06_RS12660 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS12665 PF02515 CoA-transferase family III RD06_RS12675 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS12680 PF13380 CoA binding domain RD06_RS12680 PF13607 Succinyl-CoA ligase like flavodoxin domain RD06_RS12685 PF00392 Bacterial regulatory proteins, gntR family RD06_RS12685 PF07729 FCD domain RD06_RS12690 PF03328 HpcH/HpaI aldolase/citrate lyase family RD06_RS12700 PF03466 LysR substrate binding domain RD06_RS12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS12710 PF12951 Passenger-associated-transport-repeat RD06_RS12720 PF03551 Transcriptional regulator PadR-like family RD06_RS12725 PF03372 Endonuclease/Exonuclease/phosphatase family RD06_RS12730 PF13091 PLD-like domain RD06_RS12745 PF03706 Lysylphosphatidylglycerol synthase TM region RD06_RS12775 PF00128 Alpha amylase, catalytic domain RD06_RS12775 PF11896 Domain of unknown function (DUF3416) RD06_RS12780 PF00128 Alpha amylase, catalytic domain RD06_RS12780 PF16657 Maltogenic Amylase, C-terminal domain RD06_RS12785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD06_RS12785 PF02806 Alpha amylase, C-terminal all-beta domain RD06_RS12785 PF00128 Alpha amylase, catalytic domain RD06_RS12790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD06_RS12790 PF00128 Alpha amylase, catalytic domain RD06_RS12795 PF00128 Alpha amylase, catalytic domain RD06_RS12795 PF11941 Domain of unknown function (DUF3459) RD06_RS12795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD06_RS12805 PF02446 4-alpha-glucanotransferase RD06_RS12820 PF08543 Phosphomethylpyrimidine kinase RD06_RS12825 PF01168 Alanine racemase, N-terminal domain RD06_RS12830 PF00392 Bacterial regulatory proteins, gntR family RD06_RS12830 PF00155 Aminotransferase class I and II RD06_RS12845 PF00582 Universal stress protein family RD06_RS12850 PF00248 Aldo/keto reductase family RD06_RS12860 PF01447 Thermolysin metallopeptidase, catalytic domain RD06_RS12860 PF16485 Protealysin propeptide RD06_RS12860 PF02868 Thermolysin metallopeptidase, alpha-helical domain RD06_RS12865 PF07681 DoxX RD06_RS12885 PF00578 AhpC/TSA family RD06_RS12890 PF03960 ArsC family RD06_RS12895 PF02515 CoA-transferase family III RD06_RS12915 PF00255 Glutathione peroxidase RD06_RS12920 PF02798 Glutathione S-transferase, N-terminal domain RD06_RS12920 PF00043 Glutathione S-transferase, C-terminal domain RD06_RS12935 PF03099 Biotin/lipoate A/B protein ligase family RD06_RS12935 PF10437 Bacterial lipoate protein ligase C-terminus RD06_RS12950 PF02666 Phosphatidylserine decarboxylase RD06_RS12955 PF01070 FMN-dependent dehydrogenase RD06_RS12960 PF03180 NLPA lipoprotein RD06_RS12965 PF08808 RES domain RD06_RS12975 PF04241 Protein of unknown function (DUF423) RD06_RS12995 PF13458 Periplasmic binding protein RD06_RS13000 PF00005 ABC transporter RD06_RS13000 PF17912 MalK OB fold domain RD06_RS13005 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS13010 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS13015 PF13416 Bacterial extracellular solute-binding protein RD06_RS13020 PF14748 Pyrroline-5-carboxylate reductase dimerisation RD06_RS13020 PF03807 NADP oxidoreductase coenzyme F420-dependent RD06_RS13025 PF02592 Putative vitamin uptake transporter RD06_RS13035 PF13458 Periplasmic binding protein RD06_RS13040 PF02653 Branched-chain amino acid transport system / permease component RD06_RS13045 PF11862 Domain of unknown function (DUF3382) RD06_RS13045 PF02653 Branched-chain amino acid transport system / permease component RD06_RS13050 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS13050 PF00005 ABC transporter RD06_RS13055 PF00005 ABC transporter RD06_RS13060 PF01177 Asp/Glu/Hydantoin racemase RD06_RS13075 PF00892 EamA-like transporter family RD06_RS13085 PF04235 Protein of unknown function (DUF418) RD06_RS13090 PF00521 DNA gyrase/topoisomerase IV, subunit A RD06_RS13100 PF00204 DNA gyrase B RD06_RS13100 PF00986 DNA gyrase B subunit, carboxyl terminus RD06_RS13100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS13100 PF01751 Toprim domain RD06_RS13105 PF00085 Thioredoxin RD06_RS13110 PF07497 Rho termination factor, RNA-binding domain RD06_RS13110 PF07498 Rho termination factor, N-terminal domain RD06_RS13110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD06_RS13120 PF08335 GlnD PII-uridylyltransferase RD06_RS13120 PF03710 Glutamate-ammonia ligase adenylyltransferase RD06_RS13125 PF02677 Epoxyqueuosine reductase QueH RD06_RS13130 PF03315 Serine dehydratase beta chain RD06_RS13130 PF03313 Serine dehydratase alpha chain RD06_RS13135 PF02690 Na+/Pi-cotransporter RD06_RS13140 PF01738 Dienelactone hydrolase family RD06_RS13150 PF01612 3'-5' exonuclease RD06_RS13150 PF01367 5'-3' exonuclease, C-terminal SAM fold RD06_RS13150 PF00476 DNA polymerase family A RD06_RS13150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RD06_RS13155 PF03641 Possible lysine decarboxylase RD06_RS13170 PF00009 Elongation factor Tu GTP binding domain RD06_RS13170 PF00679 Elongation factor G C-terminus RD06_RS13170 PF03144 Elongation factor Tu domain 2 RD06_RS13175 PF16198 tRNA pseudouridylate synthase B C-terminal domain RD06_RS13175 PF01509 TruB family pseudouridylate synthase (N terminal domain) RD06_RS13180 PF02033 Ribosome-binding factor A RD06_RS13185 PF04760 Translation initiation factor IF-2, N-terminal region RD06_RS13185 PF08364 Bacterial translation initiation factor IF-2 associated region RD06_RS13185 PF11987 Translation-initiation factor 2 RD06_RS13185 PF00009 Elongation factor Tu GTP binding domain RD06_RS13190 PF08529 NusA N-terminal domain RD06_RS13190 PF13184 NusA-like KH domain RD06_RS13195 PF02576 RimP N-terminal domain RD06_RS13195 PF17384 RimP C-terminal SH3 domain RD06_RS13200 PF00849 RNA pseudouridylate synthase RD06_RS13200 PF01479 S4 domain RD06_RS13205 PF04079 Segregation and condensation complex subunit ScpB RD06_RS13215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS13215 PF03466 LysR substrate binding domain RD06_RS13220 PF00881 Nitroreductase family RD06_RS13225 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD06_RS13225 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD06_RS13245 PF02798 Glutathione S-transferase, N-terminal domain RD06_RS13245 PF14497 Glutathione S-transferase, C-terminal domain RD06_RS13250 PF02401 LytB protein RD06_RS13255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD06_RS13260 PF04002 RadC-like JAB domain RD06_RS13265 PF04199 Putative cyclase RD06_RS13270 PF03301 Tryptophan 2,3-dioxygenase RD06_RS13275 PF01197 Ribosomal protein L31 RD06_RS13285 PF01554 MatE RD06_RS13300 PF18073 Rubredoxin metal binding domain RD06_RS13305 PF12034 Domain of unknown function (DUF3520) RD06_RS13305 PF00092 von Willebrand factor type A domain RD06_RS13305 PF12450 von Willebrand factor RD06_RS13310 PF04542 Sigma-70 region 2 RD06_RS13310 PF04545 Sigma-70, region 4 RD06_RS13330 PF00842 Alanine racemase, C-terminal domain RD06_RS13330 PF01168 Alanine racemase, N-terminal domain RD06_RS13345 PF01593 Flavin containing amine oxidoreductase RD06_RS13345 PF01593 Flavin containing amine oxidoreductase RD06_RS13350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RD06_RS13360 PF01061 ABC-2 type transporter RD06_RS13365 PF00005 ABC transporter RD06_RS13385 PF02424 ApbE family RD06_RS13390 PF00667 FAD binding domain RD06_RS13390 PF00175 Oxidoreductase NAD-binding domain RD06_RS13390 PF00258 Flavodoxin RD06_RS13400 PF07969 Amidohydrolase family RD06_RS13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS13405 PF03466 LysR substrate binding domain RD06_RS13415 PF09370 Phosphoenolpyruvate hydrolase-like RD06_RS13430 PF03212 Pertactin RD06_RS13430 PF03797 Autotransporter beta-domain RD06_RS13435 PF03797 Autotransporter beta-domain RD06_RS13435 PF03212 Pertactin RD06_RS13445 PF10431 C-terminal, D2-small domain, of ClpB protein RD06_RS13445 PF00004 ATPase family associated with various cellular activities (AAA) RD06_RS13445 PF02861 Clp amino terminal domain, pathogenicity island component RD06_RS13445 PF07724 AAA domain (Cdc48 subfamily) RD06_RS13445 PF17871 AAA lid domain RD06_RS13450 PF00027 Cyclic nucleotide-binding domain RD06_RS13450 PF13545 Crp-like helix-turn-helix domain RD06_RS13465 PF00293 NUDIX domain RD06_RS13470 PF12843 Putative quorum-sensing-regulated virulence factor RD06_RS13480 PF08281 Sigma-70, region 4 RD06_RS13480 PF04542 Sigma-70 region 2 RD06_RS13480 PF12680 SnoaL-like domain RD06_RS13485 PF02627 Carboxymuconolactone decarboxylase family RD06_RS13515 PF00155 Aminotransferase class I and II RD06_RS13520 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS13525 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS13530 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS13535 PF00005 ABC transporter RD06_RS13560 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD06_RS13585 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS13590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD06_RS13590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD06_RS13595 PF03466 LysR substrate binding domain RD06_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS13605 PF17676 LD-carboxypeptidase C-terminal domain RD06_RS13605 PF02016 LD-carboxypeptidase N-terminal domain RD06_RS13620 PF07690 Major Facilitator Superfamily RD06_RS13630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS13630 PF03466 LysR substrate binding domain RD06_RS13635 PF13378 Enolase C-terminal domain-like RD06_RS13635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD06_RS13640 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS13660 PF02567 Phenazine biosynthesis-like protein RD06_RS13670 PF03239 Iron permease FTR1 family RD06_RS13680 PF10634 Fe2+ transport protein RD06_RS13685 PF07879 PHB/PHA accumulation regulator DNA-binding domain RD06_RS13685 PF05233 PHB accumulation regulatory domain RD06_RS13690 PF00106 short chain dehydrogenase RD06_RS13695 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RD06_RS13700 PF02578 Multi-copper polyphenol oxidoreductase laccase RD06_RS13705 PF01479 S4 domain RD06_RS13705 PF00849 RNA pseudouridylate synthase RD06_RS13710 PF13525 Outer membrane lipoprotein RD06_RS13715 PF04851 Type III restriction enzyme, res subunit RD06_RS13715 PF13307 Helicase C-terminal domain RD06_RS13720 PF17674 HHH domain RD06_RS13720 PF00575 S1 RNA binding domain RD06_RS13720 PF09371 Tex-like protein N-terminal domain RD06_RS13720 PF16921 Tex protein YqgF-like domain RD06_RS13725 PF00579 tRNA synthetases class I (W and Y) RD06_RS13745 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS13755 PF03466 LysR substrate binding domain RD06_RS13765 PF03969 AFG1-like ATPase RD06_RS13770 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS13770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD06_RS13775 PF02817 e3 binding domain RD06_RS13775 PF00364 Biotin-requiring enzyme RD06_RS13775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD06_RS13780 PF00676 Dehydrogenase E1 component RD06_RS13780 PF16078 2-oxoglutarate dehydrogenase N-terminus RD06_RS13780 PF16870 2-oxoglutarate dehydrogenase C-terminal RD06_RS13780 PF02779 Transketolase, pyrimidine binding domain RD06_RS13785 PF03169 OPT oligopeptide transporter protein RD06_RS13790 PF03169 OPT oligopeptide transporter protein RD06_RS13795 PF01037 Lrp/AsnC ligand binding domain RD06_RS13800 PF00456 Transketolase, thiamine diphosphate binding domain RD06_RS13800 PF17831 Pyruvate dehydrogenase E1 component middle domain RD06_RS13805 PF00390 Malic enzyme, N-terminal domain RD06_RS13805 PF03949 Malic enzyme, NAD binding domain RD06_RS13805 PF01515 Phosphate acetyl/butaryl transferase RD06_RS13810 PF16970 Type-1 fimbrial protein, A RD06_RS13820 PF03449 Transcription elongation factor, N-terminal RD06_RS13820 PF01272 Transcription elongation factor, GreA/GreB, C-term RD06_RS13825 PF02811 PHP domain RD06_RS13860 PF01026 TatD related DNase RD06_RS13865 PF00005 ABC transporter RD06_RS13870 PF12704 MacB-like periplasmic core domain RD06_RS13870 PF02687 FtsX-like permease family RD06_RS13880 PF17768 RecJ OB domain RD06_RS13880 PF02272 DHHA1 domain RD06_RS13880 PF01368 DHH family RD06_RS13885 PF03462 PCRF domain RD06_RS13885 PF00472 RF-1 domain RD06_RS13890 PF00106 short chain dehydrogenase RD06_RS13895 PF01336 OB-fold nucleic acid binding domain RD06_RS13895 PF00152 tRNA synthetases class II (D, K and N) RD06_RS13905 PF00440 Bacterial regulatory proteins, tetR family RD06_RS13905 PF17932 Tetracyclin repressor-like, C-terminal domain RD06_RS13910 PF00501 AMP-binding enzyme RD06_RS13915 PF00005 ABC transporter RD06_RS13935 PF00005 ABC transporter RD06_RS13935 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS13945 PF07689 KaiB domain RD06_RS13945 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS13950 PF00486 Transcriptional regulatory protein, C terminal RD06_RS13950 PF00072 Response regulator receiver domain RD06_RS13955 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RD06_RS13965 PF03631 Virulence factor BrkB RD06_RS13980 PF01207 Dihydrouridine synthase (Dus) RD06_RS13985 PF01636 Phosphotransferase enzyme family RD06_RS14005 PF01985 CRS1 / YhbY (CRM) domain RD06_RS14010 PF01728 FtsJ-like methyltransferase RD06_RS14015 PF01434 Peptidase family M41 RD06_RS14015 PF00004 ATPase family associated with various cellular activities (AAA) RD06_RS14015 PF06480 FtsH Extracellular RD06_RS14015 PF17862 AAA+ lid domain RD06_RS14020 PF00809 Pterin binding enzyme RD06_RS14025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD06_RS14025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD06_RS14025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD06_RS14025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD06_RS14035 PF02541 Ppx/GppA phosphatase family RD06_RS14040 PF02503 Polyphosphate kinase middle domain RD06_RS14040 PF13090 Polyphosphate kinase C-terminal domain 2 RD06_RS14040 PF17941 Polyphosphate kinase C-terminal domain 1 RD06_RS14040 PF13089 Polyphosphate kinase N-terminal domain RD06_RS14045 PF12849 PBP superfamily domain RD06_RS14050 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS14055 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS14060 PF00005 ABC transporter RD06_RS14075 PF01337 Barstar (barnase inhibitor) RD06_RS14085 PF00390 Malic enzyme, N-terminal domain RD06_RS14085 PF01515 Phosphate acetyl/butaryl transferase RD06_RS14085 PF03949 Malic enzyme, NAD binding domain RD06_RS14095 PF00155 Aminotransferase class I and II RD06_RS14100 PF01464 Transglycosylase SLT domain RD06_RS14100 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RD06_RS14105 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RD06_RS14130 PF14824 Sirohaem biosynthesis protein central RD06_RS14130 PF10414 Sirohaem synthase dimerisation region RD06_RS14130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD06_RS14135 PF03212 Pertactin RD06_RS14135 PF03797 Autotransporter beta-domain RD06_RS14150 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RD06_RS14155 PF02547 Queuosine biosynthesis protein RD06_RS14160 PF01702 Queuine tRNA-ribosyltransferase RD06_RS14165 PF02699 Preprotein translocase subunit RD06_RS14170 PF02355 Protein export membrane protein RD06_RS14170 PF07549 SecD/SecF GG Motif RD06_RS14170 PF13721 SecD export protein N-terminal TM region RD06_RS14175 PF07549 SecD/SecF GG Motif RD06_RS14175 PF02355 Protein export membrane protein RD06_RS14190 PF04055 Radical SAM superfamily RD06_RS14190 PF01938 TRAM domain RD06_RS14190 PF00919 Uncharacterized protein family UPF0004 RD06_RS14195 PF02562 PhoH-like protein RD06_RS14200 PF02130 Uncharacterized protein family UPF0054 RD06_RS14205 PF03471 Transporter associated domain RD06_RS14205 PF00571 CBS domain RD06_RS14210 PF00795 Carbon-nitrogen hydrolase RD06_RS14215 PF00248 Aldo/keto reductase family RD06_RS14240 PF04344 Chemotaxis phosphatase, CheZ RD06_RS14245 PF00072 Response regulator receiver domain RD06_RS14250 PF00072 Response regulator receiver domain RD06_RS14250 PF01339 CheB methylesterase RD06_RS14260 PF02203 Tar ligand binding domain homologue RD06_RS14260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD06_RS14260 PF00672 HAMP domain RD06_RS14265 PF01584 CheW-like domain RD06_RS14270 PF02895 Signal transducing histidine kinase, homodimeric domain RD06_RS14270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS14270 PF09078 CheY binding RD06_RS14270 PF01627 Hpt domain RD06_RS14270 PF01584 CheW-like domain RD06_RS14275 PF00072 Response regulator receiver domain RD06_RS14280 PF13677 Membrane MotB of proton-channel complex MotA/MotB RD06_RS14280 PF00691 OmpA family RD06_RS14285 PF01618 MotA/TolQ/ExbB proton channel family RD06_RS14290 PF05280 Flagellar transcriptional activator (FlhC) RD06_RS14295 PF05247 Flagellar transcriptional activator (FlhD) RD06_RS14300 PF04545 Sigma-70, region 4 RD06_RS14300 PF04539 Sigma-70 region 3 RD06_RS14300 PF04542 Sigma-70 region 2 RD06_RS14310 PF01176 Translation initiation factor 1A / IF-1 RD06_RS14320 PF08525 Opacity-associated protein A N-terminal motif RD06_RS14320 PF01551 Peptidase family M23 RD06_RS14320 PF01476 LysM domain RD06_RS14330 PF00994 Probable molybdopterin binding domain RD06_RS14340 PF03591 AzlC protein RD06_RS14350 PF00226 DnaJ domain RD06_RS14350 PF01556 DnaJ C terminal domain RD06_RS14370 PF14834 Glutathione S-transferase, C-terminal domain RD06_RS14370 PF02798 Glutathione S-transferase, N-terminal domain RD06_RS14375 PF11339 Protein of unknown function (DUF3141) RD06_RS14380 PF01515 Phosphate acetyl/butaryl transferase RD06_RS14385 PF00871 Acetokinase family RD06_RS14395 PF00162 Phosphoglycerate kinase RD06_RS14400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD06_RS14400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD06_RS14405 PF02779 Transketolase, pyrimidine binding domain RD06_RS14405 PF02780 Transketolase, C-terminal domain RD06_RS14405 PF00456 Transketolase, thiamine diphosphate binding domain RD06_RS14410 PF04452 RNA methyltransferase RD06_RS14420 PF00669 Bacterial flagellin N-terminal helical region RD06_RS14420 PF00700 Bacterial flagellin C-terminal helical region RD06_RS14425 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS14425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD06_RS14435 PF00456 Transketolase, thiamine diphosphate binding domain RD06_RS14435 PF17831 Pyruvate dehydrogenase E1 component middle domain RD06_RS14440 PF00989 PAS fold RD06_RS14440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS14440 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS14445 PF00072 Response regulator receiver domain RD06_RS14445 PF00196 Bacterial regulatory proteins, luxR family RD06_RS14450 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD06_RS14450 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD06_RS14455 PF01432 Peptidase family M3 RD06_RS14460 PF02630 SCO1/SenC RD06_RS14470 PF02321 Outer membrane efflux protein RD06_RS14475 PF00873 AcrB/AcrD/AcrF family RD06_RS14480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD06_RS14480 PF00529 HlyD membrane-fusion protein of T1SS RD06_RS14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS14485 PF03466 LysR substrate binding domain RD06_RS14490 PF01479 S4 domain RD06_RS14490 PF00849 RNA pseudouridylate synthase RD06_RS14495 PF04345 Chorismate lyase RD06_RS14500 PF07690 Major Facilitator Superfamily RD06_RS14510 PF00248 Aldo/keto reductase family RD06_RS14520 PF00293 NUDIX domain RD06_RS14525 PF01245 Ribosomal protein L19 RD06_RS14540 PF04055 Radical SAM superfamily RD06_RS14550 PF01507 Phosphoadenosine phosphosulfate reductase family RD06_RS14555 PF01507 Phosphoadenosine phosphosulfate reductase family RD06_RS14560 PF12857 TOBE-like domain RD06_RS14560 PF17850 CysA C-terminal regulatory domain RD06_RS14560 PF00005 ABC transporter RD06_RS14565 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS14570 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS14585 PF10417 C-terminal domain of 1-Cys peroxiredoxin RD06_RS14585 PF00578 AhpC/TSA family RD06_RS14590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS14590 PF12806 Acetyl-CoA dehydrogenase C-terminal like RD06_RS14590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS14590 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS14595 PF00766 Electron transfer flavoprotein FAD-binding domain RD06_RS14595 PF01012 Electron transfer flavoprotein domain RD06_RS14600 PF01012 Electron transfer flavoprotein domain RD06_RS14605 PF00850 Histone deacetylase domain RD06_RS14610 PF13406 Transglycosylase SLT domain RD06_RS14615 PF00291 Pyridoxal-phosphate dependent enzyme RD06_RS14625 PF10531 SLBB domain RD06_RS14630 PF01370 NAD dependent epimerase/dehydratase family RD06_RS14635 PF00294 pfkB family carbohydrate kinase RD06_RS14640 PF18073 Rubredoxin metal binding domain RD06_RS14650 PF00216 Bacterial DNA-binding protein RD06_RS14655 PF00575 S1 RNA binding domain RD06_RS14660 PF02224 Cytidylate kinase RD06_RS14665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD06_RS14670 PF02153 Prephenate dehydrogenase RD06_RS14675 PF00800 Prephenate dehydratase RD06_RS14675 PF01842 ACT domain RD06_RS14675 PF01817 Chorismate mutase type II RD06_RS14680 PF00266 Aminotransferase class-V RD06_RS14685 PF03989 DNA gyrase C-terminal domain, beta-propeller RD06_RS14685 PF00521 DNA gyrase/topoisomerase IV, subunit A RD06_RS14690 PF00691 OmpA family RD06_RS14700 PF13419 Haloacid dehalogenase-like hydrolase RD06_RS14705 PF07690 Major Facilitator Superfamily RD06_RS14730 PF03466 LysR substrate binding domain RD06_RS14730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS14735 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS14745 PF00817 impB/mucB/samB family RD06_RS14745 PF11799 impB/mucB/samB family C-terminal domain RD06_RS14745 PF11798 IMS family HHH motif RD06_RS14755 PF00326 Prolyl oligopeptidase family RD06_RS14760 PF00905 Penicillin binding protein transpeptidase domain RD06_RS14760 PF00912 Transglycosylase RD06_RS14760 PF17092 Penicillin-binding protein OB-like domain RD06_RS14765 PF00149 Calcineurin-like phosphoesterase RD06_RS14780 PF00248 Aldo/keto reductase family RD06_RS14785 PF00248 Aldo/keto reductase family RD06_RS14790 PF00005 ABC transporter RD06_RS14790 PF00664 ABC transporter transmembrane region RD06_RS14840 PF01039 Carboxyl transferase domain RD06_RS14845 PF00289 Biotin carboxylase, N-terminal domain RD06_RS14845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD06_RS14845 PF02785 Biotin carboxylase C-terminal domain RD06_RS14850 PF07702 UTRA domain RD06_RS14850 PF00392 Bacterial regulatory proteins, gntR family RD06_RS14870 PF00364 Biotin-requiring enzyme RD06_RS14870 PF00682 HMGL-like RD06_RS14870 PF02436 Conserved carboxylase domain RD06_RS14875 PF00364 Biotin-requiring enzyme RD06_RS14885 PF01966 HD domain RD06_RS14905 PF07317 Flagellar regulator YcgR RD06_RS14905 PF07238 PilZ domain RD06_RS14920 PF05724 Thiopurine S-methyltransferase (TPMT) RD06_RS14925 PF00005 ABC transporter RD06_RS14925 PF00664 ABC transporter transmembrane region RD06_RS14940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS14940 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS14940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS14945 PF10369 Small subunit of acetolactate synthase RD06_RS14950 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RD06_RS14950 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RD06_RS14955 PF01066 CDP-alcohol phosphatidyltransferase RD06_RS14965 PF00312 Ribosomal protein S15 RD06_RS14970 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RD06_RS14970 PF00575 S1 RNA binding domain RD06_RS14970 PF01138 3' exoribonuclease family, domain 1 RD06_RS14970 PF00013 KH domain RD06_RS14970 PF03725 3' exoribonuclease family, domain 2 RD06_RS14985 PF13291 ACT domain RD06_RS14985 PF00291 Pyridoxal-phosphate dependent enzyme RD06_RS15000 PF00698 Acyl transferase domain RD06_RS15000 PF08240 Alcohol dehydrogenase GroES-like domain RD06_RS15000 PF14765 Polyketide synthase dehydratase RD06_RS15000 PF08990 Erythronolide synthase docking RD06_RS15000 PF00550 Phosphopantetheine attachment site RD06_RS15000 PF00109 Beta-ketoacyl synthase, N-terminal domain RD06_RS15000 PF02801 Beta-ketoacyl synthase, C-terminal domain RD06_RS15000 PF16197 Ketoacyl-synthetase C-terminal extension RD06_RS15000 PF08659 KR domain RD06_RS15005 PF00121 Triosephosphate isomerase RD06_RS15010 PF03840 Preprotein translocase SecG subunit RD06_RS15020 PF02028 BCCT, betaine/carnitine/choline family transporter RD06_RS15030 PF07476 Methylaspartate ammonia-lyase C-terminus RD06_RS15030 PF05034 Methylaspartate ammonia-lyase N-terminus RD06_RS15035 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS15050 PF00206 Lyase RD06_RS15050 PF14698 Argininosuccinate lyase C-terminal RD06_RS15055 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS15070 PF03466 LysR substrate binding domain RD06_RS15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS15075 PF01053 Cys/Met metabolism PLP-dependent enzyme RD06_RS15080 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD06_RS15095 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS15100 PF01266 FAD dependent oxidoreductase RD06_RS15110 PF05378 Hydantoinase/oxoprolinase N-terminal region RD06_RS15110 PF01968 Hydantoinase/oxoprolinase RD06_RS15120 PF00127 Copper binding proteins, plastocyanin/azurin family RD06_RS15130 PF02321 Outer membrane efflux protein RD06_RS15135 PF00873 AcrB/AcrD/AcrF family RD06_RS15140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD06_RS15145 PF01638 HxlR-like helix-turn-helix RD06_RS15155 PF02028 BCCT, betaine/carnitine/choline family transporter RD06_RS15160 PF03466 LysR substrate binding domain RD06_RS15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS15165 PF00781 Diacylglycerol kinase catalytic domain RD06_RS15175 PF01569 PAP2 superfamily RD06_RS15200 PF13609 Gram-negative porin RD06_RS15205 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RD06_RS15210 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RD06_RS15215 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RD06_RS15220 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RD06_RS15230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RD06_RS15230 PF10531 SLBB domain RD06_RS15230 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD06_RS15235 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal RD06_RS15235 PF00384 Molybdopterin oxidoreductase RD06_RS15235 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD06_RS15240 PF00146 NADH dehydrogenase RD06_RS15245 PF12838 4Fe-4S dicluster domain RD06_RS15250 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RD06_RS15255 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD06_RS15260 PF00361 Proton-conducting membrane transporter RD06_RS15260 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD06_RS15265 PF00361 Proton-conducting membrane transporter RD06_RS15265 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus RD06_RS15270 PF00361 Proton-conducting membrane transporter RD06_RS15280 PF07715 TonB-dependent Receptor Plug Domain RD06_RS15280 PF00593 TonB dependent receptor RD06_RS15285 PF07715 TonB-dependent Receptor Plug Domain RD06_RS15285 PF00593 TonB dependent receptor RD06_RS15300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS15300 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS15300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS15305 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS15310 PF03466 LysR substrate binding domain RD06_RS15310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS15320 PF02559 CarD-like/TRCF domain RD06_RS15320 PF17757 UvrB interaction domain RD06_RS15320 PF03461 TRCF domain RD06_RS15320 PF00271 Helicase conserved C-terminal domain RD06_RS15320 PF00270 DEAD/DEAH box helicase RD06_RS15325 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD06_RS15330 PF02542 YgbB family RD06_RS15340 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RD06_RS15345 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RD06_RS15345 PF11940 Domain of unknown function (DUF3458) Ig-like fold RD06_RS15345 PF01433 Peptidase family M1 domain RD06_RS15365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS15365 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS15365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS15375 PF09084 NMT1/THI5 like RD06_RS15380 PF00005 ABC transporter RD06_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS15395 PF13193 AMP-binding enzyme C-terminal domain RD06_RS15395 PF00501 AMP-binding enzyme RD06_RS15400 PF08240 Alcohol dehydrogenase GroES-like domain RD06_RS15400 PF00107 Zinc-binding dehydrogenase RD06_RS15405 PF07729 FCD domain RD06_RS15405 PF00392 Bacterial regulatory proteins, gntR family RD06_RS15415 PF00392 Bacterial regulatory proteins, gntR family RD06_RS15415 PF07729 FCD domain RD06_RS15420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS15420 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS15420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS15440 PF01063 Amino-transferase class IV RD06_RS15445 PF00005 ABC transporter RD06_RS15450 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS15460 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS15465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS15465 PF03466 LysR substrate binding domain RD06_RS15470 PF02321 Outer membrane efflux protein RD06_RS15475 PF13533 Biotin-lipoyl like RD06_RS15480 PF00005 ABC transporter RD06_RS15480 PF00664 ABC transporter transmembrane region RD06_RS15480 PF03412 Peptidase C39 family RD06_RS15485 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) RD06_RS15485 PF03497 Anthrax toxin LF subunit RD06_RS15485 PF02382 N-terminal domain in RTX protein RD06_RS15495 PF02794 RTX toxin acyltransferase family RD06_RS15500 PF00171 Aldehyde dehydrogenase family RD06_RS15510 PF01266 FAD dependent oxidoreductase RD06_RS15515 PF02538 Hydantoinase B/oxoprolinase RD06_RS15520 PF05378 Hydantoinase/oxoprolinase N-terminal region RD06_RS15520 PF01968 Hydantoinase/oxoprolinase RD06_RS15525 PF03466 LysR substrate binding domain RD06_RS15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS15535 PF00348 Polyprenyl synthetase RD06_RS15545 PF00829 Ribosomal prokaryotic L21 protein RD06_RS15550 PF01016 Ribosomal L27 protein RD06_RS15555 PF01018 GTP1/OBG RD06_RS15555 PF01926 50S ribosome-binding GTPase RD06_RS15560 PF00696 Amino acid kinase family RD06_RS15560 PF01472 PUA domain RD06_RS15600 PF04773 FecR protein RD06_RS15600 PF16220 Domain of unknown function (DUF4880) RD06_RS15605 PF00593 TonB dependent receptor RD06_RS15605 PF07715 TonB-dependent Receptor Plug Domain RD06_RS15610 PF04264 YceI-like domain RD06_RS15625 PF03435 Saccharopine dehydrogenase NADP binding domain RD06_RS15625 PF16653 Saccharopine dehydrogenase C-terminal domain RD06_RS15630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD06_RS15650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS15655 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS15665 PF00005 ABC transporter RD06_RS15665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS15670 PF01425 Amidase RD06_RS15675 PF00202 Aminotransferase class-III RD06_RS15695 PF04972 BON domain RD06_RS15695 PF00691 OmpA family RD06_RS15700 PF01329 Pterin 4 alpha carbinolamine dehydratase RD06_RS15710 PF00483 Nucleotidyl transferase RD06_RS15715 PF01636 Phosphotransferase enzyme family RD06_RS15720 PF04453 LPS transport system D RD06_RS15725 PF09312 SurA N-terminal domain RD06_RS15725 PF00639 PPIC-type PPIASE domain RD06_RS15730 PF00398 Ribosomal RNA adenine dimethylase RD06_RS15735 PF02595 Glycerate kinase family RD06_RS15740 PF00224 Pyruvate kinase, barrel domain RD06_RS15740 PF02887 Pyruvate kinase, alpha/beta domain RD06_RS15745 PF07670 Nucleoside recognition RD06_RS15750 PF09317 Domain of unknown function (DUF1974) RD06_RS15750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS15750 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS15750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS15765 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS15770 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS15775 PF00005 ABC transporter RD06_RS15780 PF01032 FecCD transport family RD06_RS15790 PF00691 OmpA family RD06_RS15795 PF07676 WD40-like Beta Propeller Repeat RD06_RS15795 PF04052 TolB amino-terminal domain RD06_RS15805 PF02472 Biopolymer transport protein ExbD/TolR RD06_RS15810 PF01618 MotA/TolQ/ExbB proton channel family RD06_RS15815 PF03061 Thioesterase superfamily RD06_RS15820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD06_RS15820 PF04073 Aminoacyl-tRNA editing domain RD06_RS15820 PF03129 Anticodon binding domain RD06_RS15825 PF00293 NUDIX domain RD06_RS15830 PF00486 Transcriptional regulatory protein, C terminal RD06_RS15830 PF00072 Response regulator receiver domain RD06_RS15840 PF02586 SOS response associated peptidase (SRAP) RD06_RS15905 PF06791 Prophage tail length tape measure protein RD06_RS16045 PF03180 NLPA lipoprotein RD06_RS16055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD06_RS16055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RD06_RS16060 PF00005 ABC transporter RD06_RS16065 PF00005 ABC transporter RD06_RS16065 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS16070 PF02653 Branched-chain amino acid transport system / permease component RD06_RS16075 PF02653 Branched-chain amino acid transport system / permease component RD06_RS16080 PF13458 Periplasmic binding protein RD06_RS16085 PF01425 Amidase RD06_RS16090 PF00484 Carbonic anhydrase RD06_RS16105 PF09382 RQC domain RD06_RS16105 PF16124 RecQ zinc-binding RD06_RS16105 PF00270 DEAD/DEAH box helicase RD06_RS16105 PF00271 Helicase conserved C-terminal domain RD06_RS16105 PF00570 HRDC domain RD06_RS16110 PF17864 RuvB AAA lid domain RD06_RS16110 PF05491 RuvB C-terminal winged helix domain RD06_RS16110 PF05496 Holliday junction DNA helicase RuvB P-loop domain RD06_RS16115 PF00291 Pyridoxal-phosphate dependent enzyme RD06_RS16120 PF01370 NAD dependent epimerase/dehydratase family RD06_RS16125 PF07499 RuvA, C-terminal domain RD06_RS16125 PF01330 RuvA N terminal domain RD06_RS16130 PF02075 Crossover junction endodeoxyribonuclease RuvC RD06_RS16135 PF02142 MGS-like domain RD06_RS16135 PF01808 AICARFT/IMPCHase bienzyme RD06_RS16140 PF02954 Bacterial regulatory protein, Fis family RD06_RS16145 PF01207 Dihydrouridine synthase (Dus) RD06_RS16150 PF01494 FAD binding domain RD06_RS16160 PF00557 Metallopeptidase family M24 RD06_RS16160 PF05195 Aminopeptidase P, N-terminal domain RD06_RS16185 PF13609 Gram-negative porin RD06_RS16195 PF00483 Nucleotidyl transferase RD06_RS16200 PF01435 Peptidase family M48 RD06_RS16200 PF13181 Tetratricopeptide repeat RD06_RS16205 PF00561 alpha/beta hydrolase fold RD06_RS16220 PF01063 Amino-transferase class IV RD06_RS16235 PF00270 DEAD/DEAH box helicase RD06_RS16235 PF00271 Helicase conserved C-terminal domain RD06_RS16255 PF02464 Competence-damaged protein RD06_RS16255 PF18146 Damage-inducible protein CinA KH domain RD06_RS16255 PF00994 Probable molybdopterin binding domain RD06_RS16260 PF09339 IclR helix-turn-helix domain RD06_RS16260 PF01614 Bacterial transcriptional regulator RD06_RS16265 PF05785 Rho-activating domain of cytotoxic necrotizing factor RD06_RS16265 PF18807 Tripartite Tc toxins repeat RD06_RS16270 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS16280 PF01180 Dihydroorotate dehydrogenase RD06_RS16285 PF04377 Arginine-tRNA-protein transferase, C terminus RD06_RS16285 PF04376 Arginine-tRNA-protein transferase, N terminus RD06_RS16295 PF03466 LysR substrate binding domain RD06_RS16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS16335 PF07729 FCD domain RD06_RS16335 PF00392 Bacterial regulatory proteins, gntR family RD06_RS16340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS16340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS16340 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS16345 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS16350 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD06_RS16355 PF00390 Malic enzyme, N-terminal domain RD06_RS16355 PF03949 Malic enzyme, NAD binding domain RD06_RS16355 PF01515 Phosphate acetyl/butaryl transferase RD06_RS16365 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS16370 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS16375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS16375 PF00005 ABC transporter RD06_RS16390 PF03466 LysR substrate binding domain RD06_RS16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS16405 PF01022 Bacterial regulatory protein, arsR family RD06_RS16420 PF03594 Benzoate membrane transport protein RD06_RS16425 PF00037 4Fe-4S binding domain RD06_RS16430 PF01467 Cytidylyltransferase-like RD06_RS16440 PF02881 SRP54-type protein, helical bundle domain RD06_RS16440 PF00448 SRP54-type protein, GTPase domain RD06_RS16455 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS16460 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS16465 PF00005 ABC transporter RD06_RS16475 PF00005 ABC transporter RD06_RS16495 PF00925 GTP cyclohydrolase II RD06_RS16495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD06_RS16500 PF00885 6,7-dimethyl-8-ribityllumazine synthase RD06_RS16505 PF01029 NusB family RD06_RS16510 PF00586 AIR synthase related protein, N-terminal domain RD06_RS16510 PF02769 AIR synthase related protein, C-terminal domain RD06_RS16515 PF04608 Phosphatidylglycerophosphatase A RD06_RS16520 PF00994 Probable molybdopterin binding domain RD06_RS16520 PF02464 Competence-damaged protein RD06_RS16520 PF18146 Damage-inducible protein CinA KH domain RD06_RS16525 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RD06_RS16530 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS16535 PF01219 Prokaryotic diacylglycerol kinase RD06_RS16540 PF03631 Virulence factor BrkB RD06_RS16545 PF03797 Autotransporter beta-domain RD06_RS16545 PF03212 Pertactin RD06_RS16550 PF00118 TCP-1/cpn60 chaperonin family RD06_RS16555 PF00166 Chaperonin 10 Kd subunit RD06_RS16575 PF00890 FAD binding domain RD06_RS16585 PF03466 LysR substrate binding domain RD06_RS16585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS16590 PF00890 FAD binding domain RD06_RS16610 PF00990 Diguanylate cyclase, GGDEF domain RD06_RS16615 PF00072 Response regulator receiver domain RD06_RS16645 PF03781 Sulfatase-modifying factor enzyme 1 RD06_RS16645 PF12867 DinB superfamily RD06_RS16650 PF10017 Histidine-specific methyltransferase, SAM-dependent RD06_RS16660 PF13396 Phospholipase_D-nuclease N-terminal RD06_RS16660 PF13091 PLD-like domain RD06_RS16670 PF01645 Conserved region in glutamate synthase RD06_RS16675 PF04143 Sulphur transport RD06_RS16680 PF03547 Membrane transport protein RD06_RS16685 PF13673 Acetyltransferase (GNAT) domain RD06_RS16705 PF00773 RNB domain RD06_RS16705 PF08461 Ribonuclease R winged-helix domain RD06_RS16705 PF17876 Cold shock domain RD06_RS16705 PF00575 S1 RNA binding domain RD06_RS16705 PF08206 Ribonuclease B OB domain RD06_RS16710 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD06_RS16710 PF00588 SpoU rRNA Methylase family RD06_RS16715 PF01053 Cys/Met metabolism PLP-dependent enzyme RD06_RS16720 PF18331 PKHD-type hydroxylase C-terminal domain RD06_RS16720 PF13640 2OG-Fe(II) oxygenase superfamily RD06_RS16725 PF00216 Bacterial DNA-binding protein RD06_RS16740 PF01618 MotA/TolQ/ExbB proton channel family RD06_RS16745 PF02472 Biopolymer transport protein ExbD/TolR RD06_RS16750 PF00486 Transcriptional regulatory protein, C terminal RD06_RS16750 PF00072 Response regulator receiver domain RD06_RS16755 PF08521 Two-component sensor kinase N-terminal RD06_RS16755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS16755 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS16760 PF02705 K+ potassium transporter RD06_RS16765 PF00764 Arginosuccinate synthase RD06_RS16770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD06_RS16770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD06_RS16775 PF00202 Aminotransferase class-III RD06_RS16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS16785 PF03466 LysR substrate binding domain RD06_RS16795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD06_RS16795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD06_RS16800 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS16815 PF00392 Bacterial regulatory proteins, gntR family RD06_RS16815 PF07729 FCD domain RD06_RS16825 PF07690 Major Facilitator Superfamily RD06_RS16835 PF02627 Carboxymuconolactone decarboxylase family RD06_RS16840 PF00578 AhpC/TSA family RD06_RS16845 PF00672 HAMP domain RD06_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS16845 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS16855 PF00486 Transcriptional regulatory protein, C terminal RD06_RS16855 PF00072 Response regulator receiver domain RD06_RS16860 PF00814 Glycoprotease family RD06_RS16865 PF03167 Uracil DNA glycosylase superfamily RD06_RS16870 PF07690 Major Facilitator Superfamily RD06_RS16875 PF02463 RecF/RecN/SMC N terminal domain RD06_RS16875 PF06470 SMC proteins Flexible Hinge Domain RD06_RS16885 PF00533 BRCA1 C Terminus (BRCT) domain RD06_RS16885 PF01653 NAD-dependent DNA ligase adenylation domain RD06_RS16885 PF03120 NAD-dependent DNA ligase OB-fold domain RD06_RS16885 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RD06_RS16885 PF12826 Helix-hairpin-helix motif RD06_RS16900 PF04279 Intracellular septation protein A RD06_RS16905 PF01641 SelR domain RD06_RS16910 PF00005 ABC transporter RD06_RS16915 PF02361 Cobalt transport protein RD06_RS16920 PF02632 BioY family RD06_RS16935 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS16935 PF00005 ABC transporter RD06_RS16940 PF01063 Amino-transferase class IV RD06_RS16955 PF02653 Branched-chain amino acid transport system / permease component RD06_RS16965 PF00005 ABC transporter RD06_RS16970 PF00005 ABC transporter RD06_RS16970 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS16975 PF00633 Helix-hairpin-helix motif RD06_RS16975 PF00730 HhH-GPD superfamily base excision DNA repair protein RD06_RS16975 PF10576 Iron-sulfur binding domain of endonuclease III RD06_RS16980 PF04060 Putative Fe-S cluster RD06_RS16990 PF00970 Oxidoreductase FAD-binding domain RD06_RS16990 PF00175 Oxidoreductase NAD-binding domain RD06_RS16995 PF00037 4Fe-4S binding domain RD06_RS16995 PF11953 Domain of unknown function (DUF3470) RD06_RS17000 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RD06_RS17000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RD06_RS17005 PF01042 Endoribonuclease L-PSP RD06_RS17015 PF06167 Glucose-regulated metallo-peptidase M90 RD06_RS17020 PF02824 TGS domain RD06_RS17020 PF04607 Region found in RelA / SpoT proteins RD06_RS17020 PF13291 ACT domain RD06_RS17025 PF01546 Peptidase family M20/M25/M40 RD06_RS17025 PF07687 Peptidase dimerisation domain RD06_RS17030 PF00291 Pyridoxal-phosphate dependent enzyme RD06_RS17035 PF00290 Tryptophan synthase alpha chain RD06_RS17040 PF17848 Acetyl-coA carboxylase zinc finger domain RD06_RS17040 PF01039 Carboxyl transferase domain RD06_RS17045 PF09411 Lipid A 3-O-deacylase (PagL) RD06_RS17060 PF00575 S1 RNA binding domain RD06_RS17060 PF12111 Polyribonucleotide phosphorylase C terminal RD06_RS17060 PF10150 Ribonuclease E/G family RD06_RS17065 PF00849 RNA pseudouridylate synthase RD06_RS17065 PF01479 S4 domain RD06_RS17070 PF13419 Haloacid dehalogenase-like hydrolase RD06_RS17075 PF00174 Oxidoreductase molybdopterin binding domain RD06_RS17080 PF01794 Ferric reductase like transmembrane component RD06_RS17090 PF02515 CoA-transferase family III RD06_RS17095 PF03466 LysR substrate binding domain RD06_RS17095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS17105 PF02515 CoA-transferase family III RD06_RS17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS17125 PF03466 LysR substrate binding domain RD06_RS17130 PF01042 Endoribonuclease L-PSP RD06_RS17135 PF00175 Oxidoreductase NAD-binding domain RD06_RS17135 PF00970 Oxidoreductase FAD-binding domain RD06_RS17135 PF00042 Globin RD06_RS17140 PF02667 Short chain fatty acid transporter RD06_RS17145 PF00171 Aldehyde dehydrogenase family RD06_RS17150 PF07729 FCD domain RD06_RS17150 PF00392 Bacterial regulatory proteins, gntR family RD06_RS17160 PF00313 'Cold-shock' DNA-binding domain RD06_RS17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS17165 PF03466 LysR substrate binding domain RD06_RS17185 PF02803 Thiolase, C-terminal domain RD06_RS17185 PF00108 Thiolase, N-terminal domain RD06_RS17195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS17195 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS17195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS17200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS17200 PF03466 LysR substrate binding domain RD06_RS17205 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17210 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS17215 PF02515 CoA-transferase family III RD06_RS17220 PF03741 Integral membrane protein TerC family RD06_RS17220 PF03471 Transporter associated domain RD06_RS17225 PF02308 MgtC family RD06_RS17230 PF00009 Elongation factor Tu GTP binding domain RD06_RS17230 PF03764 Elongation factor G, domain IV RD06_RS17230 PF14492 Elongation Factor G, domain II RD06_RS17230 PF00679 Elongation factor G C-terminus RD06_RS17230 PF03144 Elongation factor Tu domain 2 RD06_RS17235 PF00392 Bacterial regulatory proteins, gntR family RD06_RS17235 PF00155 Aminotransferase class I and II RD06_RS17245 PF00582 Universal stress protein family RD06_RS17250 PF00009 Elongation factor Tu GTP binding domain RD06_RS17250 PF03144 Elongation factor Tu domain 2 RD06_RS17250 PF00679 Elongation factor G C-terminus RD06_RS17250 PF14492 Elongation Factor G, domain II RD06_RS17250 PF03764 Elongation factor G, domain IV RD06_RS17260 PF00701 Dihydrodipicolinate synthetase family RD06_RS17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS17265 PF03466 LysR substrate binding domain RD06_RS17270 PF02515 CoA-transferase family III RD06_RS17275 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS17280 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS17280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS17285 PF01575 MaoC like domain RD06_RS17300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD06_RS17300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD06_RS17305 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS17310 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS17310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS17310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS17315 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17320 PF13380 CoA binding domain RD06_RS17320 PF13607 Succinyl-CoA ligase like flavodoxin domain RD06_RS17330 PF00676 Dehydrogenase E1 component RD06_RS17335 PF02780 Transketolase, C-terminal domain RD06_RS17335 PF02779 Transketolase, pyrimidine binding domain RD06_RS17340 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS17345 PF00364 Biotin-requiring enzyme RD06_RS17345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD06_RS17345 PF02817 e3 binding domain RD06_RS17350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS17350 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS17350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS17355 PF13193 AMP-binding enzyme C-terminal domain RD06_RS17355 PF00501 AMP-binding enzyme RD06_RS17365 PF13458 Periplasmic binding protein RD06_RS17370 PF02653 Branched-chain amino acid transport system / permease component RD06_RS17375 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD06_RS17375 PF00005 ABC transporter RD06_RS17380 PF00005 ABC transporter RD06_RS17385 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS17385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD06_RS17400 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17415 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17425 PF00899 ThiF family RD06_RS17430 PF03572 Peptidase family S41 RD06_RS17430 PF13180 PDZ domain RD06_RS17435 PF01551 Peptidase family M23 RD06_RS17440 PF00300 Histidine phosphatase superfamily (branch 1) RD06_RS17445 PF00581 Rhodanese-like domain RD06_RS17445 PF17773 UPF0176 acylphosphatase like domain RD06_RS17445 PF12368 Rhodanase C-terminal RD06_RS17450 PF00462 Glutaredoxin RD06_RS17455 PF02556 Preprotein translocase subunit SecB RD06_RS17460 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RD06_RS17460 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RD06_RS17465 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17470 PF00588 SpoU rRNA Methylase family RD06_RS17480 PF08241 Methyltransferase domain RD06_RS17485 PF04107 Glutamate-cysteine ligase family 2(GCS2) RD06_RS17490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD06_RS17500 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS17505 PF00005 ABC transporter RD06_RS17515 PF01799 [2Fe-2S] binding domain RD06_RS17515 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS17520 PF00941 FAD binding domain in molybdopterin dehydrogenase RD06_RS17520 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD06_RS17525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD06_RS17525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD06_RS17530 PF03480 Bacterial extracellular solute-binding protein, family 7 RD06_RS17535 PF00355 Rieske [2Fe-2S] domain RD06_RS17540 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS17540 PF14759 Reductase C-terminal RD06_RS17545 PF00355 Rieske [2Fe-2S] domain RD06_RS17545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD06_RS17555 PF00857 Isochorismatase family RD06_RS17565 PF00561 alpha/beta hydrolase fold RD06_RS17570 PF17645 Arylmalonate decarboxylase RD06_RS17580 PF12804 MobA-like NTP transferase domain RD06_RS17590 PF01047 MarR family RD06_RS17595 PF02386 Cation transport protein RD06_RS17600 PF02254 TrkA-N domain RD06_RS17600 PF02080 TrkA-C domain RD06_RS17605 PF02954 Bacterial regulatory protein, Fis family RD06_RS17605 PF00072 Response regulator receiver domain RD06_RS17605 PF00158 Sigma-54 interaction domain RD06_RS17610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS17610 PF00672 HAMP domain RD06_RS17610 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS17610 PF00989 PAS fold RD06_RS17620 PF01189 16S rRNA methyltransferase RsmB/F RD06_RS17620 PF01029 NusB family RD06_RS17630 PF01958 Domain of unknown function DUF108 RD06_RS17630 PF03447 Homoserine dehydrogenase, NAD binding domain RD06_RS17645 PF01810 LysE type translocator RD06_RS17650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS17650 PF03466 LysR substrate binding domain RD06_RS17660 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17665 PF01168 Alanine racemase, N-terminal domain RD06_RS17670 PF00155 Aminotransferase class I and II RD06_RS17675 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS17685 PF00682 HMGL-like RD06_RS17695 PF01037 Lrp/AsnC ligand binding domain RD06_RS17700 PF00266 Aminotransferase class-V RD06_RS17705 PF01327 Polypeptide deformylase RD06_RS17715 PF02911 Formyl transferase, C-terminal domain RD06_RS17715 PF00551 Formyl transferase RD06_RS17725 PF13419 Haloacid dehalogenase-like hydrolase RD06_RS17735 PF03641 Possible lysine decarboxylase RD06_RS17745 PF00919 Uncharacterized protein family UPF0004 RD06_RS17745 PF18693 TRAM domain RD06_RS17745 PF04055 Radical SAM superfamily RD06_RS17750 PF01361 Tautomerase enzyme RD06_RS17755 PF01266 FAD dependent oxidoreductase RD06_RS17760 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17765 PF07729 FCD domain RD06_RS17765 PF00392 Bacterial regulatory proteins, gntR family RD06_RS17775 PF00202 Aminotransferase class-III RD06_RS17780 PF00491 Arginase family RD06_RS17790 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17795 PF02627 Carboxymuconolactone decarboxylase family RD06_RS17800 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS17805 PF09339 IclR helix-turn-helix domain RD06_RS17805 PF01614 Bacterial transcriptional regulator RD06_RS17810 PF13193 AMP-binding enzyme C-terminal domain RD06_RS17810 PF00501 AMP-binding enzyme RD06_RS17815 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS17825 PF12951 Passenger-associated-transport-repeat RD06_RS17825 PF12951 Passenger-associated-transport-repeat RD06_RS17845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS17845 PF03466 LysR substrate binding domain RD06_RS17855 PF01168 Alanine racemase, N-terminal domain RD06_RS17855 PF14031 Putative serine dehydratase domain RD06_RS17860 PF07411 Domain of unknown function (DUF1508) RD06_RS17865 PF01145 SPFH domain / Band 7 family RD06_RS17875 PF01042 Endoribonuclease L-PSP RD06_RS17920 PF03837 RecT family RD06_RS17955 PF00589 Phage integrase family RD06_RS17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS17960 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS17975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS17975 PF03466 LysR substrate binding domain RD06_RS17980 PF02525 Flavodoxin-like fold RD06_RS17990 PF02096 60Kd inner membrane protein RD06_RS17990 PF14849 YidC periplasmic domain RD06_RS17995 PF01809 Putative membrane protein insertion efficiency factor RD06_RS18000 PF00825 Ribonuclease P RD06_RS18005 PF00468 Ribosomal protein L34 RD06_RS18010 PF00308 Bacterial dnaA protein RD06_RS18010 PF08299 Bacterial dnaA protein helix-turn-helix RD06_RS18010 PF11638 DnaA N-terminal domain RD06_RS18015 PF02768 DNA polymerase III beta subunit, C-terminal domain RD06_RS18015 PF02767 DNA polymerase III beta subunit, central domain RD06_RS18015 PF00712 DNA polymerase III beta subunit, N-terminal domain RD06_RS18020 PF01751 Toprim domain RD06_RS18020 PF00204 DNA gyrase B RD06_RS18020 PF00986 DNA gyrase B subunit, carboxyl terminus RD06_RS18020 PF18053 DNA gyrase B subunit insert domain RD06_RS18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS18025 PF01614 Bacterial transcriptional regulator RD06_RS18025 PF09339 IclR helix-turn-helix domain RD06_RS18030 PF01425 Amidase RD06_RS18035 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS18045 PF01070 FMN-dependent dehydrogenase RD06_RS18070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS18070 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS18070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS18075 PF00376 MerR family regulatory protein RD06_RS18075 PF09278 MerR, DNA binding RD06_RS18090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD06_RS18090 PF02770 Acyl-CoA dehydrogenase, middle domain RD06_RS18090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD06_RS18100 PF02803 Thiolase, C-terminal domain RD06_RS18100 PF00108 Thiolase, N-terminal domain RD06_RS18105 PF01039 Carboxyl transferase domain RD06_RS18110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD06_RS18110 PF00364 Biotin-requiring enzyme RD06_RS18110 PF00289 Biotin carboxylase, N-terminal domain RD06_RS18110 PF02785 Biotin carboxylase C-terminal domain RD06_RS18120 PF00202 Aminotransferase class-III RD06_RS18125 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS18130 PF01168 Alanine racemase, N-terminal domain RD06_RS18130 PF14031 Putative serine dehydratase domain RD06_RS18135 PF16868 NMT1-like family RD06_RS18145 PF00593 TonB dependent receptor RD06_RS18145 PF07715 TonB-dependent Receptor Plug Domain RD06_RS18150 PF04361 Protein of unknown function (DUF494) RD06_RS18165 PF01131 DNA topoisomerase RD06_RS18165 PF01751 Toprim domain RD06_RS18175 PF00005 ABC transporter RD06_RS18180 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS18190 PF00171 Aldehyde dehydrogenase family RD06_RS18200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD06_RS18200 PF00205 Thiamine pyrophosphate enzyme, central domain RD06_RS18200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD06_RS18205 PF01037 Lrp/AsnC ligand binding domain RD06_RS18210 PF01062 Bestrophin, RFP-TM, chloride channel RD06_RS18220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD06_RS18235 PF02310 B12 binding domain RD06_RS18235 PF02607 B12 binding domain RD06_RS18235 PF02965 Vitamin B12 dependent methionine synthase, activation domain RD06_RS18235 PF00809 Pterin binding enzyme RD06_RS18235 PF02574 Homocysteine S-methyltransferase RD06_RS18240 PF07715 TonB-dependent Receptor Plug Domain RD06_RS18240 PF00593 TonB dependent receptor RD06_RS18245 PF01497 Periplasmic binding protein RD06_RS18250 PF05690 Thiazole biosynthesis protein ThiG RD06_RS18255 PF08543 Phosphomethylpyrimidine kinase RD06_RS18270 PF02321 Outer membrane efflux protein RD06_RS18275 PF01467 Cytidylyltransferase-like RD06_RS18285 PF01594 AI-2E family transporter RD06_RS18295 PF07885 Ion channel RD06_RS18295 PF02254 TrkA-N domain RD06_RS18305 PF00164 Ribosomal protein S12/S23 RD06_RS18310 PF00177 Ribosomal protein S7p/S5e RD06_RS18315 PF00679 Elongation factor G C-terminus RD06_RS18315 PF14492 Elongation Factor G, domain II RD06_RS18315 PF00009 Elongation factor Tu GTP binding domain RD06_RS18315 PF03144 Elongation factor Tu domain 2 RD06_RS18315 PF03764 Elongation factor G, domain IV RD06_RS18320 PF00009 Elongation factor Tu GTP binding domain RD06_RS18320 PF03143 Elongation factor Tu C-terminal domain RD06_RS18320 PF03144 Elongation factor Tu domain 2 RD06_RS18325 PF00338 Ribosomal protein S10p/S20e RD06_RS18330 PF00297 Ribosomal protein L3 RD06_RS18335 PF00573 Ribosomal protein L4/L1 family RD06_RS18340 PF00276 Ribosomal protein L23 RD06_RS18345 PF00181 Ribosomal Proteins L2, RNA binding domain RD06_RS18345 PF03947 Ribosomal Proteins L2, C-terminal domain RD06_RS18350 PF00203 Ribosomal protein S19 RD06_RS18355 PF00237 Ribosomal protein L22p/L17e RD06_RS18360 PF07650 KH domain RD06_RS18360 PF00189 Ribosomal protein S3, C-terminal domain RD06_RS18365 PF00252 Ribosomal protein L16p/L10e RD06_RS18370 PF00831 Ribosomal L29 protein RD06_RS18375 PF00366 Ribosomal protein S17 RD06_RS18385 PF00171 Aldehyde dehydrogenase family RD06_RS18395 PF00238 Ribosomal protein L14p/L23e RD06_RS18400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RD06_RS18405 PF00673 ribosomal L5P family C-terminus RD06_RS18405 PF00281 Ribosomal protein L5 RD06_RS18410 PF00253 Ribosomal protein S14p/S29e RD06_RS18415 PF00410 Ribosomal protein S8 RD06_RS18420 PF00347 Ribosomal protein L6 RD06_RS18425 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RD06_RS18430 PF00333 Ribosomal protein S5, N-terminal domain RD06_RS18430 PF03719 Ribosomal protein S5, C-terminal domain RD06_RS18435 PF00327 Ribosomal protein L30p/L7e RD06_RS18440 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RD06_RS18445 PF00344 SecY translocase RD06_RS18450 PF01176 Translation initiation factor 1A / IF-1 RD06_RS18455 PF00444 Ribosomal protein L36 RD06_RS18460 PF00416 Ribosomal protein S13/S18 RD06_RS18465 PF00411 Ribosomal protein S11 RD06_RS18470 PF01479 S4 domain RD06_RS18470 PF00163 Ribosomal protein S4/S9 N-terminal domain RD06_RS18475 PF01000 RNA polymerase Rpb3/RpoA insert domain RD06_RS18475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RD06_RS18475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RD06_RS18480 PF01196 Ribosomal protein L17 RD06_RS18490 PF03091 CutA1 divalent ion tolerance protein RD06_RS18495 PF02683 Cytochrome C biogenesis protein transmembrane region RD06_RS18495 PF11412 Disulphide bond corrector protein DsbC RD06_RS18500 PF00892 EamA-like transporter family RD06_RS18505 PF00490 Delta-aminolevulinic acid dehydratase RD06_RS18510 PF01926 50S ribosome-binding GTPase RD06_RS18515 PF00034 Cytochrome c RD06_RS18520 PF05140 ResB-like family RD06_RS18525 PF01578 Cytochrome C assembly protein RD06_RS18530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD06_RS18530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RD06_RS18535 PF01491 Frataxin-like domain RD06_RS18540 PF17092 Penicillin-binding protein OB-like domain RD06_RS18540 PF00912 Transglycosylase RD06_RS18540 PF00905 Penicillin binding protein transpeptidase domain RD06_RS18545 PF01202 Shikimate kinase RD06_RS18550 PF01761 3-dehydroquinate synthase RD06_RS18555 PF01966 HD domain RD06_RS18555 PF13286 Phosphohydrolase-associated domain RD06_RS18560 PF00043 Glutathione S-transferase, C-terminal domain RD06_RS18560 PF13417 Glutathione S-transferase, N-terminal domain RD06_RS18565 PF17760 UvrA interaction domain RD06_RS18565 PF17755 UvrA DNA-binding domain RD06_RS18570 PF07690 Major Facilitator Superfamily RD06_RS18575 PF00436 Single-strand binding protein family RD06_RS18580 PF07715 TonB-dependent Receptor Plug Domain RD06_RS18580 PF00593 TonB dependent receptor RD06_RS18590 PF03328 HpcH/HpaI aldolase/citrate lyase family RD06_RS18600 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS18610 PF03466 LysR substrate binding domain RD06_RS18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS18615 PF01979 Amidohydrolase family RD06_RS18620 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS18625 PF00534 Glycosyl transferases group 1 RD06_RS18625 PF13439 Glycosyltransferase Family 4 RD06_RS18635 PF03466 LysR substrate binding domain RD06_RS18635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS18645 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS18650 PF00005 ABC transporter RD06_RS18670 PF01274 Malate synthase RD06_RS18675 PF07729 FCD domain RD06_RS18675 PF00392 Bacterial regulatory proteins, gntR family RD06_RS18690 PF01040 UbiA prenyltransferase family RD06_RS18695 PF00155 Aminotransferase class I and II RD06_RS18700 PF13185 GAF domain RD06_RS18705 PF00701 Dihydrodipicolinate synthetase family RD06_RS18715 PF01476 LysM domain RD06_RS18715 PF04972 BON domain RD06_RS18720 PF05690 Thiazole biosynthesis protein ThiG RD06_RS18720 PF02597 ThiS family RD06_RS18725 PF00561 alpha/beta hydrolase fold RD06_RS18730 PF02390 Putative methyltransferase RD06_RS18745 PF00682 HMGL-like RD06_RS18750 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS18765 PF07702 UTRA domain RD06_RS18765 PF00392 Bacterial regulatory proteins, gntR family RD06_RS18770 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS18780 PF07702 UTRA domain RD06_RS18780 PF00392 Bacterial regulatory proteins, gntR family RD06_RS18785 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS18795 PF00005 ABC transporter RD06_RS18800 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS18805 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS18810 PF16197 Ketoacyl-synthetase C-terminal extension RD06_RS18810 PF00109 Beta-ketoacyl synthase, N-terminal domain RD06_RS18810 PF02801 Beta-ketoacyl synthase, C-terminal domain RD06_RS18810 PF00698 Acyl transferase domain RD06_RS18810 PF14765 Polyketide synthase dehydratase RD06_RS18810 PF08990 Erythronolide synthase docking RD06_RS18810 PF08240 Alcohol dehydrogenase GroES-like domain RD06_RS18810 PF00550 Phosphopantetheine attachment site RD06_RS18810 PF08659 KR domain RD06_RS18815 PF02515 CoA-transferase family III RD06_RS18820 PF00440 Bacterial regulatory proteins, tetR family RD06_RS18825 PF00293 NUDIX domain RD06_RS18825 PF09297 NADH pyrophosphatase zinc ribbon domain RD06_RS18830 PF00175 Oxidoreductase NAD-binding domain RD06_RS18830 PF00111 2Fe-2S iron-sulfur cluster binding domain RD06_RS18830 PF00970 Oxidoreductase FAD-binding domain RD06_RS18835 PF01425 Amidase RD06_RS18845 PF03466 LysR substrate binding domain RD06_RS18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD06_RS18850 PF13458 Periplasmic binding protein RD06_RS18860 PF00005 ABC transporter RD06_RS18870 PF02653 Branched-chain amino acid transport system / permease component RD06_RS18880 PF00355 Rieske [2Fe-2S] domain RD06_RS18895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RD06_RS18895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RD06_RS18910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD06_RS18910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD06_RS18910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD06_RS18915 PF07690 Major Facilitator Superfamily RD06_RS18920 PF00132 Bacterial transferase hexapeptide (six repeats) RD06_RS18920 PF14602 Hexapeptide repeat of succinyl-transferase RD06_RS18920 PF12804 MobA-like NTP transferase domain RD06_RS18940 PF02630 SCO1/SenC RD06_RS18945 PF01040 UbiA prenyltransferase family RD06_RS18950 PF02628 Cytochrome oxidase assembly protein RD06_RS18970 PF00510 Cytochrome c oxidase subunit III RD06_RS18985 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD06_RS18990 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD06_RS18990 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RD06_RS19000 PF00999 Sodium/hydrogen exchanger family RD06_RS19005 PF00149 Calcineurin-like phosphoesterase RD06_RS19010 PF04545 Sigma-70, region 4 RD06_RS19010 PF04542 Sigma-70 region 2 RD06_RS19010 PF00140 Sigma-70 factor, region 1.2 RD06_RS19020 PF00756 Putative esterase RD06_RS19025 PF00107 Zinc-binding dehydrogenase RD06_RS19025 PF08240 Alcohol dehydrogenase GroES-like domain RD06_RS19035 PF00310 Glutamine amidotransferases class-II RD06_RS19035 PF01493 GXGXG motif RD06_RS19035 PF01645 Conserved region in glutamate synthase RD06_RS19035 PF04898 Glutamate synthase central domain RD06_RS19040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD06_RS19040 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD06_RS19045 PF03922 OmpW family RD06_RS19050 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS19055 PF00005 ABC transporter RD06_RS19060 PF02405 Permease MlaE RD06_RS19065 PF02470 MlaD protein RD06_RS19070 PF04333 MlaA lipoprotein RD06_RS19080 PF00005 ABC transporter RD06_RS19085 PF01061 ABC-2 type transporter RD06_RS19095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD06_RS19100 PF01634 ATP phosphoribosyltransferase RD06_RS19105 PF00815 Histidinol dehydrogenase RD06_RS19110 PF00155 Aminotransferase class I and II RD06_RS19115 PF00475 Imidazoleglycerol-phosphate dehydratase RD06_RS19120 PF00117 Glutamine amidotransferase class-I RD06_RS19125 PF00977 Histidine biosynthesis protein RD06_RS19130 PF00977 Histidine biosynthesis protein RD06_RS19135 PF01502 Phosphoribosyl-AMP cyclohydrolase RD06_RS19140 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RD06_RS19145 PF01230 HIT domain RD06_RS19150 PF02416 mttA/Hcf106 family RD06_RS19155 PF02416 mttA/Hcf106 family RD06_RS19160 PF00902 Sec-independent protein translocase protein (TatC) RD06_RS19170 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS19175 PF02917 Pertussis toxin, subunit 1 RD06_RS19180 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD06_RS19180 PF03440 Aerolysin/Pertussis toxin (APT) domain RD06_RS19185 PF09275 Pertussis toxin S4 subunit RD06_RS19190 PF09276 Pertussis toxin S5 subunit RD06_RS19195 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD06_RS19195 PF03440 Aerolysin/Pertussis toxin (APT) domain RD06_RS19200 PF04956 TrbC/VIRB2 family RD06_RS19205 PF05101 Type IV secretory pathway, VirB3-like protein RD06_RS19210 PF03135 CagE, TrbE, VirB family, component of type IV transporter system RD06_RS19215 PF04610 TrbL/VirB6 plasmid conjugal transfer protein RD06_RS19225 PF04335 VirB8 protein RD06_RS19230 PF03524 Conjugal transfer protein RD06_RS19235 PF03743 Bacterial conjugation TrbI-like protein RD06_RS19240 PF00437 Type II/IV secretion system protein RD06_RS19250 PF00892 EamA-like transporter family RD06_RS19270 PF12631 MnmE helical domain RD06_RS19270 PF10396 GTP-binding protein TrmE N-terminus RD06_RS19270 PF01926 50S ribosome-binding GTPase RD06_RS19275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS19280 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS19285 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS19285 PF12911 N-terminal TM domain of oligopeptide transport permease C RD06_RS19290 PF00005 ABC transporter RD06_RS19290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS19300 PF01960 ArgJ family RD06_RS19310 PF00293 NUDIX domain RD06_RS19325 PF02321 Outer membrane efflux protein RD06_RS19330 PF00873 AcrB/AcrD/AcrF family RD06_RS19335 PF00873 AcrB/AcrD/AcrF family RD06_RS19340 PF13533 Biotin-lipoyl like RD06_RS19345 PF07072 Cell division protein RD06_RS19350 PF01121 Dephospho-CoA kinase RD06_RS19355 PF01478 Type IV leader peptidase family RD06_RS19355 PF06750 Bacterial Peptidase A24 N-terminal domain RD06_RS19370 PF02569 Pantoate-beta-alanine ligase RD06_RS19375 PF02616 Segregation and condensation protein ScpA RD06_RS19385 PF07690 Major Facilitator Superfamily RD06_RS19390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD06_RS19390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD06_RS19400 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS19405 PF00005 ABC transporter RD06_RS19410 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS19415 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS19420 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD06_RS19425 PF00005 ABC transporter RD06_RS19430 PF18075 FtsX extracellular domain RD06_RS19435 PF03975 CheD chemotactic sensory transduction RD06_RS19445 PF10576 Iron-sulfur binding domain of endonuclease III RD06_RS19445 PF00633 Helix-hairpin-helix motif RD06_RS19445 PF00730 HhH-GPD superfamily base excision DNA repair protein RD06_RS19445 PF14815 NUDIX domain RD06_RS19455 PF08241 Methyltransferase domain RD06_RS19465 PF02515 CoA-transferase family III RD06_RS19470 PF02515 CoA-transferase family III RD06_RS19480 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS19485 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS19490 PF00881 Nitroreductase family RD06_RS19500 PF00682 HMGL-like RD06_RS19505 PF00378 Enoyl-CoA hydratase/isomerase RD06_RS19510 PF02515 CoA-transferase family III RD06_RS19515 PF03401 Tripartite tricarboxylate transporter family receptor RD06_RS19525 PF00199 Catalase RD06_RS19525 PF06628 Catalase-related immune-responsive RD06_RS19530 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS19535 PF00005 ABC transporter RD06_RS19545 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD06_RS19550 PF01546 Peptidase family M20/M25/M40 RD06_RS19550 PF07687 Peptidase dimerisation domain RD06_RS19555 PF00005 ABC transporter RD06_RS19555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS19560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD06_RS19560 PF00005 ABC transporter RD06_RS19565 PF12911 N-terminal TM domain of oligopeptide transport permease C RD06_RS19565 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS19570 PF00528 Binding-protein-dependent transport system inner membrane component RD06_RS19575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD06_RS19580 PF01926 50S ribosome-binding GTPase RD06_RS19580 PF12631 MnmE helical domain RD06_RS19580 PF10396 GTP-binding protein TrmE N-terminus RD06_RS19590 PF00486 Transcriptional regulatory protein, C terminal RD06_RS19590 PF00072 Response regulator receiver domain RD06_RS19595 PF00512 His Kinase A (phospho-acceptor) domain RD06_RS19595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD06_RS19610 PF01970 Tripartite tricarboxylate transporter TctA family RD06_RS19615 PF00155 Aminotransferase class I and II RD06_RS19620 PF00313 'Cold-shock' DNA-binding domain