locus-tag class description ABB88_RS00005 PF13932 GidA associated domain ABB88_RS00005 PF01134 Glucose inhibited division protein A ABB88_RS00010 PF02527 rRNA small subunit methyltransferase G ABB88_RS00015 PF13614 AAA domain ABB88_RS00025 PF02195 ParB-like nuclease domain ABB88_RS00025 PF17762 HTH domain found in ParB protein ABB88_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain ABB88_RS00030 PF00710 Asparaginase, N-terminal ABB88_RS00035 PF00710 Asparaginase, N-terminal ABB88_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain ABB88_RS00055 PF03143 Elongation factor Tu C-terminal domain ABB88_RS00055 PF03144 Elongation factor Tu domain 2 ABB88_RS00055 PF00009 Elongation factor Tu GTP binding domain ABB88_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABB88_RS00070 PF00467 KOW motif ABB88_RS00070 PF02357 Transcription termination factor nusG ABB88_RS00075 PF00298 Ribosomal protein L11, RNA binding domain ABB88_RS00075 PF03946 Ribosomal protein L11, N-terminal domain ABB88_RS00080 PF00687 Ribosomal protein L1p/L10e family ABB88_RS00085 PF00466 Ribosomal protein L10 ABB88_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain ABB88_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain ABB88_RS00095 PF04565 RNA polymerase Rpb2, domain 3 ABB88_RS00095 PF10385 RNA polymerase beta subunit external 1 domain ABB88_RS00095 PF04561 RNA polymerase Rpb2, domain 2 ABB88_RS00095 PF00562 RNA polymerase Rpb2, domain 6 ABB88_RS00095 PF04563 RNA polymerase beta subunit ABB88_RS00095 PF04560 RNA polymerase Rpb2, domain 7 ABB88_RS00100 PF04983 RNA polymerase Rpb1, domain 3 ABB88_RS00100 PF05000 RNA polymerase Rpb1, domain 4 ABB88_RS00100 PF04997 RNA polymerase Rpb1, domain 1 ABB88_RS00100 PF04998 RNA polymerase Rpb1, domain 5 ABB88_RS00100 PF00623 RNA polymerase Rpb1, domain 2 ABB88_RS00130 PF00072 Response regulator receiver domain ABB88_RS00130 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS00140 PF02515 CoA-transferase family III ABB88_RS00155 PF01575 MaoC like domain ABB88_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS00160 PF03466 LysR substrate binding domain ABB88_RS00165 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit ABB88_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit ABB88_RS00190 PF05746 DALR anticodon binding domain ABB88_RS00200 PF01553 Acyltransferase ABB88_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABB88_RS00215 PF01327 Polypeptide deformylase ABB88_RS00250 PF02615 Malate/L-lactate dehydrogenase ABB88_RS00255 PF00561 alpha/beta hydrolase fold ABB88_RS00260 PF00561 alpha/beta hydrolase fold ABB88_RS00260 PF07021 Methionine biosynthesis protein MetW ABB88_RS00275 PF07690 Major Facilitator Superfamily ABB88_RS00285 PF01177 Asp/Glu/Hydantoin racemase ABB88_RS00290 PF00005 ABC transporter ABB88_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS00340 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS00355 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS00355 PF00970 Oxidoreductase FAD-binding domain ABB88_RS00355 PF00175 Oxidoreductase NAD-binding domain ABB88_RS00360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS00370 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS00400 PF00183 Hsp90 protein ABB88_RS00405 PF00043 Glutathione S-transferase, C-terminal domain ABB88_RS00405 PF13417 Glutathione S-transferase, N-terminal domain ABB88_RS00410 PF01510 N-acetylmuramoyl-L-alanine amidase ABB88_RS00420 PF01578 Cytochrome C assembly protein ABB88_RS00425 PF00448 SRP54-type protein, GTPase domain ABB88_RS00425 PF02978 Signal peptide binding domain ABB88_RS00425 PF02881 SRP54-type protein, helical bundle domain ABB88_RS00440 PF02719 Polysaccharide biosynthesis protein ABB88_RS00450 PF10997 Alternate to MurJ ABB88_RS00455 PF00862 Sucrose synthase ABB88_RS00455 PF00534 Glycosyl transferases group 1 ABB88_RS00460 PF02397 Bacterial sugar transferase ABB88_RS00465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABB88_RS00475 PF02350 UDP-N-acetylglucosamine 2-epimerase ABB88_RS00480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABB88_RS00485 PF00132 Bacterial transferase hexapeptide (six repeats) ABB88_RS00490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABB88_RS00490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABB88_RS00495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABB88_RS00500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABB88_RS00500 PF00534 Glycosyl transferases group 1 ABB88_RS00510 PF03309 Type III pantothenate kinase ABB88_RS00520 PF02405 Permease MlaE ABB88_RS00525 PF00005 ABC transporter ABB88_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain ABB88_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase ABB88_RS00550 PF01063 Amino-transferase class IV ABB88_RS00555 PF04359 Protein of unknown function (DUF493) ABB88_RS00560 PF03099 Biotin/lipoate A/B protein ligase family ABB88_RS00565 PF04055 Radical SAM superfamily ABB88_RS00565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ABB88_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ABB88_RS00575 PF04321 RmlD substrate binding domain ABB88_RS00580 PF16363 GDP-mannose 4,6 dehydratase ABB88_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme ABB88_RS00600 PF01323 DSBA-like thioredoxin domain ABB88_RS00600 PF00085 Thioredoxin ABB88_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain ABB88_RS00610 PF05746 DALR anticodon binding domain ABB88_RS00610 PF00750 tRNA synthetases class I (R) ABB88_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS00640 PF13416 Bacterial extracellular solute-binding protein ABB88_RS00645 PF17912 MalK OB fold domain ABB88_RS00645 PF00005 ABC transporter ABB88_RS00650 PF00149 Calcineurin-like phosphoesterase ABB88_RS00660 PF00005 ABC transporter ABB88_RS00660 PF12857 TOBE-like domain ABB88_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS00680 PF00356 Bacterial regulatory proteins, lacI family ABB88_RS00690 PF01425 Amidase ABB88_RS00695 PF00682 HMGL-like ABB88_RS00695 PF08502 LeuA allosteric (dimerisation) domain ABB88_RS00705 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABB88_RS00705 PF04552 Sigma-54, DNA binding domain ABB88_RS00705 PF04963 Sigma-54 factor, core binding domain ABB88_RS00715 PF03466 LysR substrate binding domain ABB88_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS00730 PF13609 Gram-negative porin ABB88_RS00735 PF00585 C-terminal regulatory domain of Threonine dehydratase ABB88_RS00735 PF00291 Pyridoxal-phosphate dependent enzyme ABB88_RS00750 PF07729 FCD domain ABB88_RS00750 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS00755 PF02515 CoA-transferase family III ABB88_RS00765 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS00775 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS00785 PF03746 LamB/YcsF family ABB88_RS00790 PF02626 Carboxyltransferase domain, subdomain A and B ABB88_RS00795 PF02682 Carboxyltransferase domain, subdomain C and D ABB88_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS00805 PF03466 LysR substrate binding domain ABB88_RS00810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABB88_RS00810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABB88_RS00810 PF01842 ACT domain ABB88_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS00820 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS00820 PF00672 HAMP domain ABB88_RS00825 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS00825 PF00072 Response regulator receiver domain ABB88_RS00830 PF11808 Phosphate regulon sensor protein PhoR ABB88_RS00830 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS00830 PF00989 PAS fold ABB88_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS00835 PF00072 Response regulator receiver domain ABB88_RS00835 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS00840 PF01209 ubiE/COQ5 methyltransferase family ABB88_RS00855 PF03109 ABC1 family ABB88_RS00870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS00870 PF00005 ABC transporter ABB88_RS00875 PF04536 TPM domain ABB88_RS00885 PF00271 Helicase conserved C-terminal domain ABB88_RS00885 PF00270 DEAD/DEAH box helicase ABB88_RS00890 PF01810 LysE type translocator ABB88_RS00895 PF16658 Class II release factor RF3, C-terminal domain ABB88_RS00895 PF03144 Elongation factor Tu domain 2 ABB88_RS00895 PF00009 Elongation factor Tu GTP binding domain ABB88_RS00905 PF00210 Ferritin-like domain ABB88_RS00930 PF17773 UPF0176 acylphosphatase like domain ABB88_RS00930 PF00581 Rhodanese-like domain ABB88_RS00935 PF01588 Putative tRNA binding domain ABB88_RS00935 PF09334 tRNA synthetases class I (M) ABB88_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase ABB88_RS00960 PF00692 dUTPase ABB88_RS00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ABB88_RS00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ABB88_RS00985 PF01276 Orn/Lys/Arg decarboxylase, major domain ABB88_RS01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABB88_RS01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABB88_RS01005 PF02535 ZIP Zinc transporter ABB88_RS01010 PF01571 Aminomethyltransferase folate-binding domain ABB88_RS01010 PF08669 Glycine cleavage T-protein C-terminal barrel domain ABB88_RS01015 PF01597 Glycine cleavage H-protein ABB88_RS01020 PF02347 Glycine cleavage system P-protein ABB88_RS01025 PF07729 FCD domain ABB88_RS01025 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS01030 PF02515 CoA-transferase family III ABB88_RS01040 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS01060 PF12146 Serine aminopeptidase, S33 ABB88_RS01070 PF02426 Muconolactone delta-isomerase ABB88_RS01075 PF01144 Coenzyme A transferase ABB88_RS01080 PF01144 Coenzyme A transferase ABB88_RS01085 PF09339 IclR helix-turn-helix domain ABB88_RS01085 PF01614 Bacterial transcriptional regulator ABB88_RS01095 PF02667 Short chain fatty acid transporter ABB88_RS01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABB88_RS01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABB88_RS01105 PF03797 Autotransporter beta-domain ABB88_RS01105 PF00082 Subtilase family ABB88_RS01110 PF00311 Phosphoenolpyruvate carboxylase ABB88_RS01115 PF06508 Queuosine biosynthesis protein QueC ABB88_RS01145 PF01565 FAD binding domain ABB88_RS01145 PF02913 FAD linked oxidases, C-terminal domain ABB88_RS01150 PF00171 Aldehyde dehydrogenase family ABB88_RS01155 PF01964 Radical SAM ThiC family ABB88_RS01155 PF13667 ThiC-associated domain ABB88_RS01160 PF02355 Protein export membrane protein ABB88_RS01160 PF07549 SecD/SecF GG Motif ABB88_RS01165 PF09518 HindIII restriction endonuclease ABB88_RS01195 PF02627 Carboxymuconolactone decarboxylase family ABB88_RS01200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABB88_RS01200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABB88_RS01205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABB88_RS01205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABB88_RS01210 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS01210 PF07702 UTRA domain ABB88_RS01215 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS01220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS01230 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS01235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABB88_RS01240 PF01743 Poly A polymerase head domain ABB88_RS01240 PF12626 Polymerase A arginine-rich C-terminus ABB88_RS01240 PF12627 Probable RNA and SrmB- binding site of polymerase A ABB88_RS01250 PF00308 Bacterial dnaA protein ABB88_RS01255 PF00586 AIR synthase related protein, N-terminal domain ABB88_RS01255 PF02769 AIR synthase related protein, C-terminal domain ABB88_RS01265 PF01119 DNA mismatch repair protein, C-terminal domain ABB88_RS01265 PF08676 MutL C terminal dimerisation domain ABB88_RS01270 PF09335 SNARE associated Golgi protein ABB88_RS01275 PF01520 N-acetylmuramoyl-L-alanine amidase ABB88_RS01275 PF11741 AMIN domain ABB88_RS01280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABB88_RS01285 PF00206 Lyase ABB88_RS01285 PF10415 Fumarase C C-terminus ABB88_RS01295 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS01300 PF03466 LysR substrate binding domain ABB88_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS01310 PF02515 CoA-transferase family III ABB88_RS01315 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS01320 PF18158 Adaptive response protein AidB N-terminal domain ABB88_RS01320 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS01340 PF01654 Cytochrome bd terminal oxidase subunit I ABB88_RS01345 PF02322 Cytochrome bd terminal oxidase subunit II ABB88_RS01350 PF08173 Membrane bound YbgT-like protein ABB88_RS01355 PF00664 ABC transporter transmembrane region ABB88_RS01355 PF00005 ABC transporter ABB88_RS01360 PF00005 ABC transporter ABB88_RS01360 PF00664 ABC transporter transmembrane region ABB88_RS01365 PF00156 Phosphoribosyl transferase domain ABB88_RS01380 PF13609 Gram-negative porin ABB88_RS01410 PF04386 Stringent starvation protein B ABB88_RS01415 PF02798 Glutathione S-transferase, N-terminal domain ABB88_RS01415 PF00043 Glutathione S-transferase, C-terminal domain ABB88_RS01420 PF02167 Cytochrome C1 family ABB88_RS01425 PF00032 Cytochrome b(C-terminal)/b6/petD ABB88_RS01425 PF00033 Cytochrome b/b6/petB ABB88_RS01430 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ABB88_RS01430 PF00355 Rieske [2Fe-2S] domain ABB88_RS01435 PF01741 Large-conductance mechanosensitive channel, MscL ABB88_RS01440 PF01784 NIF3 (NGG1p interacting factor 3) ABB88_RS01445 PF13180 PDZ domain ABB88_RS01455 PF04299 Putative FMN-binding domain ABB88_RS01460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABB88_RS01465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS01470 PF07859 alpha/beta hydrolase fold ABB88_RS01480 PF08502 LeuA allosteric (dimerisation) domain ABB88_RS01480 PF00682 HMGL-like ABB88_RS01485 PF12833 Helix-turn-helix domain ABB88_RS01490 PF00920 Dehydratase family ABB88_RS01495 PF07690 Major Facilitator Superfamily ABB88_RS01500 PF03466 LysR substrate binding domain ABB88_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS01510 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) ABB88_RS01540 PF07859 alpha/beta hydrolase fold ABB88_RS01550 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS01555 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS01555 PF11862 Domain of unknown function (DUF3382) ABB88_RS01560 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS01560 PF00005 ABC transporter ABB88_RS01565 PF00005 ABC transporter ABB88_RS01580 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS01585 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS01585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS01585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS01590 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS01590 PF00501 AMP-binding enzyme ABB88_RS01610 PF00202 Aminotransferase class-III ABB88_RS01615 PF02581 Thiamine monophosphate synthase ABB88_RS01620 PF08543 Phosphomethylpyrimidine kinase ABB88_RS01625 PF00301 Rubredoxin ABB88_RS01630 PF02622 Uncharacterized ACR, COG1678 ABB88_RS01635 PF03652 Holliday junction resolvase ABB88_RS01640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABB88_RS01640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABB88_RS01645 PF01979 Amidohydrolase family ABB88_RS01650 PF01553 Acyltransferase ABB88_RS01655 PF00149 Calcineurin-like phosphoesterase ABB88_RS01665 PF00912 Transglycosylase ABB88_RS01680 PF00501 AMP-binding enzyme ABB88_RS01680 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS01685 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS01700 PF12706 Beta-lactamase superfamily domain ABB88_RS01705 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS01710 PF03466 LysR substrate binding domain ABB88_RS01720 PF11737 Protein of unknown function (DUF3300) ABB88_RS01730 PF00563 EAL domain ABB88_RS01730 PF03707 Bacterial signalling protein N terminal repeat ABB88_RS01730 PF00990 Diguanylate cyclase, GGDEF domain ABB88_RS01735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABB88_RS01735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABB88_RS01740 PF13532 2OG-Fe(II) oxygenase superfamily ABB88_RS01745 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA ABB88_RS01750 PF04463 Protein of unknown function (DUF523) ABB88_RS01755 PF00005 ABC transporter ABB88_RS01760 PF01032 FecCD transport family ABB88_RS01765 PF01497 Periplasmic binding protein ABB88_RS01770 PF05171 Haemin-degrading HemS.ChuX domain ABB88_RS01775 PF04886 PT repeat ABB88_RS01775 PF00593 TonB dependent receptor ABB88_RS01775 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS01780 PF04773 FecR protein ABB88_RS01780 PF16220 Domain of unknown function (DUF4880) ABB88_RS01785 PF08281 Sigma-70, region 4 ABB88_RS01785 PF04542 Sigma-70 region 2 ABB88_RS01810 PF02423 Ornithine cyclodeaminase/mu-crystallin family ABB88_RS01820 PF07729 FCD domain ABB88_RS01820 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS01840 PF00171 Aldehyde dehydrogenase family ABB88_RS01850 PF00175 Oxidoreductase NAD-binding domain ABB88_RS01850 PF00970 Oxidoreductase FAD-binding domain ABB88_RS01850 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS01875 PF03458 UPF0126 domain ABB88_RS01880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABB88_RS01880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABB88_RS01885 PF03372 Endonuclease/Exonuclease/phosphatase family ABB88_RS01890 PF00156 Phosphoribosyl transferase domain ABB88_RS01895 PF02637 GatB domain ABB88_RS01895 PF02934 GatB/GatE catalytic domain ABB88_RS01900 PF01425 Amidase ABB88_RS01905 PF02686 Glu-tRNAGln amidotransferase C subunit ABB88_RS01915 PF04085 rod shape-determining protein MreC ABB88_RS01925 PF03717 Penicillin-binding Protein dimerisation domain ABB88_RS01925 PF00905 Penicillin binding protein transpeptidase domain ABB88_RS01930 PF01098 Cell cycle protein ABB88_RS01935 PF02615 Malate/L-lactate dehydrogenase ABB88_RS01940 PF00939 Sodium:sulfate symporter transmembrane region ABB88_RS01945 PF00440 Bacterial regulatory proteins, tetR family ABB88_RS01955 PF00696 Amino acid kinase family ABB88_RS01960 PF03180 NLPA lipoprotein ABB88_RS01965 PF00578 AhpC/TSA family ABB88_RS01970 PF04972 BON domain ABB88_RS01975 PF13580 SIS domain ABB88_RS01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABB88_RS01990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABB88_RS01990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABB88_RS02010 PF02515 CoA-transferase family III ABB88_RS02015 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02020 PF02515 CoA-transferase family III ABB88_RS02035 PF09339 IclR helix-turn-helix domain ABB88_RS02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS02050 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABB88_RS02055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABB88_RS02055 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS02060 PF02515 CoA-transferase family III ABB88_RS02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS02065 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS02070 PF03466 LysR substrate binding domain ABB88_RS02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02090 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02100 PF00892 EamA-like transporter family ABB88_RS02105 PF01810 LysE type translocator ABB88_RS02110 PF12146 Serine aminopeptidase, S33 ABB88_RS02130 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ABB88_RS02135 PF00535 Glycosyl transferase family 2 ABB88_RS02155 PF03616 Sodium/glutamate symporter ABB88_RS02165 PF02667 Short chain fatty acid transporter ABB88_RS02180 PF00929 Exonuclease ABB88_RS02185 PF00873 AcrB/AcrD/AcrF family ABB88_RS02210 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS02215 PF03466 LysR substrate binding domain ABB88_RS02220 PF09330 D-lactate dehydrogenase, membrane binding ABB88_RS02220 PF01565 FAD binding domain ABB88_RS02225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS02225 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS02225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS02230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS02230 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS02230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS02235 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02240 PF01546 Peptidase family M20/M25/M40 ABB88_RS02240 PF07687 Peptidase dimerisation domain ABB88_RS02250 PF01042 Endoribonuclease L-PSP ABB88_RS02260 PF08240 Alcohol dehydrogenase GroES-like domain ABB88_RS02260 PF00107 Zinc-binding dehydrogenase ABB88_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS02265 PF03466 LysR substrate binding domain ABB88_RS02270 PF13607 Succinyl-CoA ligase like flavodoxin domain ABB88_RS02270 PF13380 CoA binding domain ABB88_RS02275 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS02285 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02290 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ABB88_RS02295 PF01380 SIS domain ABB88_RS02300 PF01037 Lrp/AsnC ligand binding domain ABB88_RS02305 PF02803 Thiolase, C-terminal domain ABB88_RS02305 PF00108 Thiolase, N-terminal domain ABB88_RS02310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABB88_RS02310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABB88_RS02310 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS02315 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS02315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS02315 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABB88_RS02315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS02320 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02325 PF00583 Acetyltransferase (GNAT) family ABB88_RS02325 PF13380 CoA binding domain ABB88_RS02325 PF13607 Succinyl-CoA ligase like flavodoxin domain ABB88_RS02340 PF00384 Molybdopterin oxidoreductase ABB88_RS02340 PF01568 Molydopterin dinucleotide binding domain ABB88_RS02360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABB88_RS02360 PF01488 Shikimate / quinate 5-dehydrogenase ABB88_RS02360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABB88_RS02365 PF03462 PCRF domain ABB88_RS02365 PF00472 RF-1 domain ABB88_RS02370 PF17827 PrmC N-terminal domain ABB88_RS02370 PF05175 Methyltransferase small domain ABB88_RS02375 PF00462 Glutaredoxin ABB88_RS02380 PF02441 Flavoprotein ABB88_RS02385 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02390 PF09084 NMT1/THI5 like ABB88_RS02395 PF03450 CO dehydrogenase flavoprotein C-terminal domain ABB88_RS02395 PF00941 FAD binding domain in molybdopterin dehydrogenase ABB88_RS02400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABB88_RS02400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABB88_RS02420 PF05036 Sporulation related domain ABB88_RS02420 PF03330 Lytic transglycolase ABB88_RS02425 PF03668 P-loop ATPase protein family ABB88_RS02435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABB88_RS02435 PF00034 Cytochrome c ABB88_RS02435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABB88_RS02440 PF02603 HPr Serine kinase N terminus ABB88_RS02440 PF07475 HPr Serine kinase C-terminal domain ABB88_RS02445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABB88_RS02450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABB88_RS02455 PF00005 ABC transporter ABB88_RS02475 PF00571 CBS domain ABB88_RS02475 PF01380 SIS domain ABB88_RS02480 PF02222 ATP-grasp domain ABB88_RS02480 PF01370 NAD dependent epimerase/dehydratase family ABB88_RS02485 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS02485 PF00593 TonB dependent receptor ABB88_RS02495 PF00732 GMC oxidoreductase ABB88_RS02495 PF05199 GMC oxidoreductase ABB88_RS02515 PF01336 OB-fold nucleic acid binding domain ABB88_RS02515 PF02938 GAD domain ABB88_RS02515 PF00152 tRNA synthetases class II (D, K and N) ABB88_RS02520 PF03372 Endonuclease/Exonuclease/phosphatase family ABB88_RS02525 PF13091 PLD-like domain ABB88_RS02550 PF13458 Periplasmic binding protein ABB88_RS02555 PF01425 Amidase ABB88_RS02560 PF05995 Cysteine dioxygenase type I ABB88_RS02565 PF01614 Bacterial transcriptional regulator ABB88_RS02565 PF09339 IclR helix-turn-helix domain ABB88_RS02570 PF02515 CoA-transferase family III ABB88_RS02575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABB88_RS02575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABB88_RS02575 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS02580 PF05275 Copper resistance protein B precursor (CopB) ABB88_RS02585 PF07731 Multicopper oxidase ABB88_RS02585 PF00394 Multicopper oxidase ABB88_RS02585 PF07732 Multicopper oxidase ABB88_RS02615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABB88_RS02615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABB88_RS02615 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ABB88_RS02620 PF02515 CoA-transferase family III ABB88_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS02640 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS02645 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS02650 PF01256 Carbohydrate kinase ABB88_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS02675 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS02675 PF12911 N-terminal TM domain of oligopeptide transport permease C ABB88_RS02680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS02680 PF00005 ABC transporter ABB88_RS02690 PF01546 Peptidase family M20/M25/M40 ABB88_RS02690 PF07687 Peptidase dimerisation domain ABB88_RS02700 PF00580 UvrD/REP helicase N-terminal domain ABB88_RS02700 PF13361 UvrD-like helicase C-terminal domain ABB88_RS02705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABB88_RS02705 PF18074 Primosomal protein N C-terminal domain ABB88_RS02705 PF00271 Helicase conserved C-terminal domain ABB88_RS02705 PF00270 DEAD/DEAH box helicase ABB88_RS02705 PF17764 3′ DNA-binding domain (3′BD) ABB88_RS02710 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABB88_RS02720 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABB88_RS02725 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABB88_RS02725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABB88_RS02730 PF00231 ATP synthase ABB88_RS02735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABB88_RS02735 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABB88_RS02735 PF00306 ATP synthase alpha/beta chain, C terminal domain ABB88_RS02740 PF00213 ATP synthase delta (OSCP) subunit ABB88_RS02745 PF00430 ATP synthase B/B' CF(0) ABB88_RS02750 PF00137 ATP synthase subunit C ABB88_RS02755 PF00119 ATP synthase A chain ABB88_RS02780 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS02785 PF17820 PDZ domain ABB88_RS02785 PF13180 PDZ domain ABB88_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS02790 PF13192 Thioredoxin domain ABB88_RS02800 PF01171 PP-loop family ABB88_RS02810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABB88_RS02810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABB88_RS02810 PF01842 ACT domain ABB88_RS02815 PF10411 Disulfide bond isomerase protein N-terminus ABB88_RS02815 PF13098 Thioredoxin-like domain ABB88_RS02820 PF01494 FAD binding domain ABB88_RS02825 PF06725 3D domain ABB88_RS02825 PF03562 MltA specific insert domain ABB88_RS02830 PF04379 ApaG domain ABB88_RS02835 PF00834 Ribulose-phosphate 3 epimerase family ABB88_RS02840 PF13419 Haloacid dehalogenase-like hydrolase ABB88_RS02845 PF00425 chorismate binding enzyme ABB88_RS02845 PF04715 Anthranilate synthase component I, N terminal region ABB88_RS02850 PF00117 Glutamine amidotransferase class-I ABB88_RS02855 PF00591 Glycosyl transferase family, a/b domain ABB88_RS02855 PF02885 Glycosyl transferase family, helical bundle domain ABB88_RS02860 PF00218 Indole-3-glycerol phosphate synthase ABB88_RS02880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS02880 PF18158 Adaptive response protein AidB N-terminal domain ABB88_RS02880 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS02885 PF03466 LysR substrate binding domain ABB88_RS02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS02890 PF00551 Formyl transferase ABB88_RS02900 PF01613 Flavin reductase like domain ABB88_RS02905 PF01243 Pyridoxamine 5'-phosphate oxidase ABB88_RS02905 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABB88_RS02915 PF07690 Major Facilitator Superfamily ABB88_RS02920 PF00899 ThiF family ABB88_RS02925 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS02925 PF07702 UTRA domain ABB88_RS02930 PF00501 AMP-binding enzyme ABB88_RS02930 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS02935 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS02950 PF01063 Amino-transferase class IV ABB88_RS02955 PF04715 Anthranilate synthase component I, N terminal region ABB88_RS02955 PF00425 chorismate binding enzyme ABB88_RS02960 PF17760 UvrA interaction domain ABB88_RS02960 PF17755 UvrA DNA-binding domain ABB88_RS02960 PF00005 ABC transporter ABB88_RS02970 PF03466 LysR substrate binding domain ABB88_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS02975 PF00535 Glycosyl transferase family 2 ABB88_RS02980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS03000 PF12848 ABC transporter ABB88_RS03000 PF00005 ABC transporter ABB88_RS03020 PF03776 Septum formation topological specificity factor MinE ABB88_RS03025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABB88_RS03030 PF03775 Septum formation inhibitor MinC, C-terminal domain ABB88_RS03030 PF05209 Septum formation inhibitor MinC, N-terminal domain ABB88_RS03035 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABB88_RS03035 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABB88_RS03040 PF01654 Cytochrome bd terminal oxidase subunit I ABB88_RS03050 PF02702 Osmosensitive K+ channel His kinase sensor domain ABB88_RS03050 PF13493 Domain of unknown function (DUF4118) ABB88_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS03055 PF00072 Response regulator receiver domain ABB88_RS03055 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS03070 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS03075 PF04391 Protein of unknown function (DUF533) ABB88_RS03095 PF01476 LysM domain ABB88_RS03095 PF01464 Transglycosylase SLT domain ABB88_RS03100 PF00753 Metallo-beta-lactamase superfamily ABB88_RS03100 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABB88_RS03105 PF08241 Methyltransferase domain ABB88_RS03110 PF00075 RNase H ABB88_RS03120 PF00732 GMC oxidoreductase ABB88_RS03120 PF05199 GMC oxidoreductase ABB88_RS03160 PF01575 MaoC like domain ABB88_RS03165 PF02803 Thiolase, C-terminal domain ABB88_RS03165 PF00108 Thiolase, N-terminal domain ABB88_RS03175 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS03180 PF00106 short chain dehydrogenase ABB88_RS03190 PF00005 ABC transporter ABB88_RS03190 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS03195 PF00005 ABC transporter ABB88_RS03200 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS03210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS03210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS03210 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS03215 PF08361 MAATS-type transcriptional repressor, C-terminal region ABB88_RS03215 PF00440 Bacterial regulatory proteins, tetR family ABB88_RS03220 PF14535 AMP-binding enzyme C-terminal domain ABB88_RS03220 PF00501 AMP-binding enzyme ABB88_RS03225 PF02515 CoA-transferase family III ABB88_RS03245 PF04285 Protein of unknown function (DUF444) ABB88_RS03250 PF04293 SpoVR like protein ABB88_RS03265 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS03270 PF05034 Methylaspartate ammonia-lyase N-terminus ABB88_RS03270 PF07476 Methylaspartate ammonia-lyase C-terminus ABB88_RS03275 PF07702 UTRA domain ABB88_RS03275 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS03290 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS03295 PF09278 MerR, DNA binding ABB88_RS03295 PF00376 MerR family regulatory protein ABB88_RS03300 PF01774 UreD urease accessory protein ABB88_RS03305 PF00547 Urease, gamma subunit ABB88_RS03310 PF04955 HupE / UreJ protein ABB88_RS03315 PF00699 Urease beta subunit ABB88_RS03320 PF01979 Amidohydrolase family ABB88_RS03320 PF00449 Urease alpha-subunit, N-terminal domain ABB88_RS03325 PF02814 UreE urease accessory protein, N-terminal domain ABB88_RS03325 PF05194 UreE urease accessory protein, C-terminal domain ABB88_RS03330 PF01730 UreF ABB88_RS03335 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABB88_RS03345 PF07364 Metallopeptidase family M81 ABB88_RS03345 PF07171 MlrC C-terminus ABB88_RS03355 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS03360 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS03365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS03375 PF00202 Aminotransferase class-III ABB88_RS03380 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS03380 PF00155 Aminotransferase class I and II ABB88_RS03385 PF00186 Dihydrofolate reductase ABB88_RS03390 PF00303 Thymidylate synthase ABB88_RS03400 PF03232 Ubiquinone biosynthesis protein COQ7 ABB88_RS03405 PF00953 Glycosyl transferase family 4 ABB88_RS03410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABB88_RS03410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABB88_RS03410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABB88_RS03415 PF01370 NAD dependent epimerase/dehydratase family ABB88_RS03420 PF03023 Lipid II flippase MurJ ABB88_RS03425 PF13439 Glycosyltransferase Family 4 ABB88_RS03425 PF00534 Glycosyl transferases group 1 ABB88_RS03430 PF00733 Asparagine synthase ABB88_RS03430 PF13537 Glutamine amidotransferase domain ABB88_RS03435 PF13439 Glycosyltransferase Family 4 ABB88_RS03435 PF00534 Glycosyl transferases group 1 ABB88_RS03440 PF00534 Glycosyl transferases group 1 ABB88_RS03440 PF13439 Glycosyltransferase Family 4 ABB88_RS03445 PF00534 Glycosyl transferases group 1 ABB88_RS03445 PF13477 Glycosyl transferase 4-like ABB88_RS03450 PF00342 Phosphoglucose isomerase ABB88_RS03455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABB88_RS03455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABB88_RS03455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABB88_RS03455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABB88_RS03465 PF02913 FAD linked oxidases, C-terminal domain ABB88_RS03465 PF01565 FAD binding domain ABB88_RS03470 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS03470 PF00072 Response regulator receiver domain ABB88_RS03475 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS03475 PF08521 Two-component sensor kinase N-terminal ABB88_RS03480 PF00884 Sulfatase ABB88_RS03490 PF04209 homogentisate 1,2-dioxygenase ABB88_RS03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS03495 PF03466 LysR substrate binding domain ABB88_RS03505 PF01494 FAD binding domain ABB88_RS03515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABB88_RS03515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABB88_RS03515 PF06827 Zinc finger found in FPG and IleRS ABB88_RS03525 PF03550 Outer membrane lipoprotein LolB ABB88_RS03530 PF00288 GHMP kinases N terminal domain ABB88_RS03530 PF08544 GHMP kinases C terminal ABB88_RS03540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABB88_RS03540 PF14572 Phosphoribosyl synthetase-associated domain ABB88_RS03545 PF14693 Ribosomal protein TL5, C-terminal domain ABB88_RS03545 PF01386 Ribosomal L25p family ABB88_RS03550 PF01195 Peptidyl-tRNA hydrolase ABB88_RS03560 PF01926 50S ribosome-binding GTPase ABB88_RS03560 PF06071 Protein of unknown function (DUF933) ABB88_RS03565 PF13356 Arm DNA-binding domain ABB88_RS03565 PF00589 Phage integrase family ABB88_RS03585 PF01555 DNA methylase ABB88_RS03590 PF13175 AAA ATPase domain ABB88_RS03625 PF00580 UvrD/REP helicase N-terminal domain ABB88_RS03625 PF13361 UvrD-like helicase C-terminal domain ABB88_RS03645 PF12951 Passenger-associated-transport-repeat ABB88_RS03655 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS03655 PF00072 Response regulator receiver domain ABB88_RS03670 PF00440 Bacterial regulatory proteins, tetR family ABB88_RS03670 PF17938 Tetracyclin repressor-like, C-terminal domain ABB88_RS03700 PF01266 FAD dependent oxidoreductase ABB88_RS03715 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS03725 PF01810 LysE type translocator ABB88_RS03770 PF00561 alpha/beta hydrolase fold ABB88_RS03780 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS03785 PF03459 TOBE domain ABB88_RS03785 PF00005 ABC transporter ABB88_RS03790 PF13091 PLD-like domain ABB88_RS03800 PF03167 Uracil DNA glycosylase superfamily ABB88_RS03805 PF00271 Helicase conserved C-terminal domain ABB88_RS03805 PF00270 DEAD/DEAH box helicase ABB88_RS03815 PF12627 Probable RNA and SrmB- binding site of polymerase A ABB88_RS03815 PF01743 Poly A polymerase head domain ABB88_RS03820 PF01464 Transglycosylase SLT domain ABB88_RS03820 PF14718 Soluble lytic murein transglycosylase L domain ABB88_RS03830 PF07690 Major Facilitator Superfamily ABB88_RS03830 PF00083 Sugar (and other) transporter ABB88_RS03835 PF00850 Histone deacetylase domain ABB88_RS03840 PF03466 LysR substrate binding domain ABB88_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS03850 PF02219 Methylenetetrahydrofolate reductase ABB88_RS03855 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ABB88_RS03860 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABB88_RS03860 PF05221 S-adenosyl-L-homocysteine hydrolase ABB88_RS03865 PF00534 Glycosyl transferases group 1 ABB88_RS03865 PF13439 Glycosyltransferase Family 4 ABB88_RS03875 PF02772 S-adenosylmethionine synthetase, central domain ABB88_RS03875 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABB88_RS03875 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABB88_RS03885 PF03279 Bacterial lipid A biosynthesis acyltransferase ABB88_RS03890 PF01678 Diaminopimelate epimerase ABB88_RS03900 PF00589 Phage integrase family ABB88_RS03900 PF02899 Phage integrase, N-terminal SAM-like domain ABB88_RS03905 PF00593 TonB dependent receptor ABB88_RS03905 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS03910 PF03824 High-affinity nickel-transport protein ABB88_RS03920 PF01297 Zinc-uptake complex component A periplasmic ABB88_RS03925 PF00950 ABC 3 transport family ABB88_RS03930 PF00005 ABC transporter ABB88_RS03940 PF01475 Ferric uptake regulator family ABB88_RS03945 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABB88_RS03945 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABB88_RS03950 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABB88_RS03955 PF00227 Proteasome subunit ABB88_RS03960 PF10431 C-terminal, D2-small domain, of ClpB protein ABB88_RS03960 PF07724 AAA domain (Cdc48 subfamily) ABB88_RS03960 PF00004 ATPase family associated with various cellular activities (AAA) ABB88_RS03970 PF01923 Cobalamin adenosyltransferase ABB88_RS03990 PF02525 Flavodoxin-like fold ABB88_RS03995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABB88_RS03995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABB88_RS04005 PF01970 Tripartite tricarboxylate transporter TctA family ABB88_RS04045 PF01790 Prolipoprotein diacylglyceryl transferase ABB88_RS04050 PF00920 Dehydratase family ABB88_RS04055 PF00034 Cytochrome c ABB88_RS04060 PF01625 Peptide methionine sulfoxide reductase ABB88_RS04065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABB88_RS04070 PF01037 Lrp/AsnC ligand binding domain ABB88_RS04110 PF07687 Peptidase dimerisation domain ABB88_RS04110 PF01546 Peptidase family M20/M25/M40 ABB88_RS04115 PF01979 Amidohydrolase family ABB88_RS04120 PF16326 ABC transporter C-terminal domain ABB88_RS04120 PF12848 ABC transporter ABB88_RS04120 PF00005 ABC transporter ABB88_RS04130 PF02381 MraZ protein, putative antitoxin-like ABB88_RS04135 PF01795 MraW methylase family ABB88_RS04140 PF04999 Cell division protein FtsL ABB88_RS04145 PF03717 Penicillin-binding Protein dimerisation domain ABB88_RS04145 PF00905 Penicillin binding protein transpeptidase domain ABB88_RS04150 PF02875 Mur ligase family, glutamate ligase domain ABB88_RS04150 PF08245 Mur ligase middle domain ABB88_RS04155 PF00953 Glycosyl transferase family 4 ABB88_RS04160 PF08245 Mur ligase middle domain ABB88_RS04160 PF02875 Mur ligase family, glutamate ligase domain ABB88_RS04165 PF01098 Cell cycle protein ABB88_RS04170 PF03033 Glycosyltransferase family 28 N-terminal domain ABB88_RS04170 PF04101 Glycosyltransferase family 28 C-terminal domain ABB88_RS04175 PF02875 Mur ligase family, glutamate ligase domain ABB88_RS04175 PF01225 Mur ligase family, catalytic domain ABB88_RS04175 PF08245 Mur ligase middle domain ABB88_RS04180 PF07478 D-ala D-ala ligase C-terminus ABB88_RS04180 PF01820 D-ala D-ala ligase N-terminus ABB88_RS04185 PF03799 Cell division protein FtsQ ABB88_RS04185 PF08478 POTRA domain, FtsQ-type ABB88_RS04190 PF02491 SHS2 domain inserted in FTSA ABB88_RS04195 PF12327 FtsZ family, C-terminal domain ABB88_RS04195 PF00091 Tubulin/FtsZ family, GTPase domain ABB88_RS04200 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABB88_RS04210 PF08525 Opacity-associated protein A N-terminal motif ABB88_RS04210 PF01551 Peptidase family M23 ABB88_RS04210 PF01476 LysM domain ABB88_RS04215 PF07516 SecA Wing and Scaffold domain ABB88_RS04215 PF01043 SecA preprotein cross-linking domain ABB88_RS04215 PF07517 SecA DEAD-like domain ABB88_RS04215 PF02810 SEC-C motif ABB88_RS04225 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS04235 PF00106 short chain dehydrogenase ABB88_RS04240 PF01266 FAD dependent oxidoreductase ABB88_RS04245 PF01037 Lrp/AsnC ligand binding domain ABB88_RS04255 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ABB88_RS04265 PF08501 Shikimate dehydrogenase substrate binding domain ABB88_RS04265 PF01488 Shikimate / quinate 5-dehydrogenase ABB88_RS04265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABB88_RS04275 PF00773 RNB domain ABB88_RS04280 PF05728 Uncharacterised protein family (UPF0227) ABB88_RS04285 PF02875 Mur ligase family, glutamate ligase domain ABB88_RS04285 PF08245 Mur ligase middle domain ABB88_RS04285 PF01225 Mur ligase family, catalytic domain ABB88_RS04290 PF08534 Redoxin ABB88_RS04295 PF01220 Dehydroquinase class II ABB88_RS04300 PF00364 Biotin-requiring enzyme ABB88_RS04305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABB88_RS04305 PF00289 Biotin carboxylase, N-terminal domain ABB88_RS04305 PF02785 Biotin carboxylase C-terminal domain ABB88_RS04320 PF00294 pfkB family carbohydrate kinase ABB88_RS04345 PF03062 MBOAT, membrane-bound O-acyltransferase family ABB88_RS04350 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS04350 PF00501 AMP-binding enzyme ABB88_RS04365 PF00268 Ribonucleotide reductase, small chain ABB88_RS04370 PF00317 Ribonucleotide reductase, all-alpha domain ABB88_RS04370 PF03477 ATP cone domain ABB88_RS04370 PF02867 Ribonucleotide reductase, barrel domain ABB88_RS04385 PF01037 Lrp/AsnC ligand binding domain ABB88_RS04400 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABB88_RS04405 PF13607 Succinyl-CoA ligase like flavodoxin domain ABB88_RS04405 PF00583 Acetyltransferase (GNAT) family ABB88_RS04405 PF13380 CoA binding domain ABB88_RS04420 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS04420 PF07729 FCD domain ABB88_RS04430 PF00271 Helicase conserved C-terminal domain ABB88_RS04430 PF03880 DbpA RNA binding domain ABB88_RS04430 PF00270 DEAD/DEAH box helicase ABB88_RS04435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABB88_RS04440 PF00857 Isochorismatase family ABB88_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS04450 PF00005 ABC transporter ABB88_RS04460 PF02230 Phospholipase/Carboxylesterase ABB88_RS04465 PF04751 Protein of unknown function (DUF615) ABB88_RS04470 PF01523 Putative modulator of DNA gyrase ABB88_RS04475 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS04480 PF00572 Ribosomal protein L13 ABB88_RS04485 PF00380 Ribosomal protein S9/S16 ABB88_RS04490 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABB88_RS04490 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABB88_RS04500 PF01521 Iron-sulphur cluster biosynthesis ABB88_RS04505 PF03702 Anhydro-N-acetylmuramic acid kinase ABB88_RS04510 PF08460 Bacterial SH3 domain ABB88_RS04510 PF01551 Peptidase family M23 ABB88_RS04520 PF01479 S4 domain ABB88_RS04520 PF00579 tRNA synthetases class I (W and Y) ABB88_RS04530 PF00464 Serine hydroxymethyltransferase ABB88_RS04535 PF03477 ATP cone domain ABB88_RS04550 PF01872 RibD C-terminal domain ABB88_RS04550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABB88_RS04565 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS04565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS04565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS04565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS04565 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS04565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS04575 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS04580 PF03466 LysR substrate binding domain ABB88_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS04585 PF02515 CoA-transferase family III ABB88_RS04605 PF05726 Pirin C-terminal cupin domain ABB88_RS04605 PF02678 Pirin ABB88_RS04620 PF00072 Response regulator receiver domain ABB88_RS04625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABB88_RS04625 PF06481 COX Aromatic Rich Motif ABB88_RS04630 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABB88_RS04635 PF00510 Cytochrome c oxidase subunit III ABB88_RS04640 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABB88_RS04645 PF01022 Bacterial regulatory protein, arsR family ABB88_RS04665 PF05114 Protein of unknown function (DUF692) ABB88_RS04680 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS04680 PF00593 TonB dependent receptor ABB88_RS04695 PF01551 Peptidase family M23 ABB88_RS04695 PF01476 LysM domain ABB88_RS04710 PF04461 Protein of unknown function (DUF520) ABB88_RS04720 PF08281 Sigma-70, region 4 ABB88_RS04720 PF04542 Sigma-70 region 2 ABB88_RS04740 PF00795 Carbon-nitrogen hydrolase ABB88_RS04745 PF01523 Putative modulator of DNA gyrase ABB88_RS04750 PF00793 DAHP synthetase I family ABB88_RS04755 PF13018 Extended Signal Peptide of Type V secretion system ABB88_RS04755 PF13332 Hemagglutinin repeat ABB88_RS04755 PF05594 Haemagluttinin repeat ABB88_RS04755 PF13018 Extended Signal Peptide of Type V secretion system ABB88_RS04755 PF05594 Haemagluttinin repeat ABB88_RS04755 PF05860 haemagglutination activity domain ABB88_RS04755 PF13332 Hemagglutinin repeat ABB88_RS04755 PF05860 haemagglutination activity domain ABB88_RS04760 PF02913 FAD linked oxidases, C-terminal domain ABB88_RS04760 PF01565 FAD binding domain ABB88_RS04765 PF02913 FAD linked oxidases, C-terminal domain ABB88_RS04765 PF01565 FAD binding domain ABB88_RS04770 PF01565 FAD binding domain ABB88_RS04775 PF13183 4Fe-4S dicluster domain ABB88_RS04775 PF02754 Cysteine-rich domain ABB88_RS04780 PF00756 Putative esterase ABB88_RS04785 PF00593 TonB dependent receptor ABB88_RS04785 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS04795 PF02233 NAD(P) transhydrogenase beta subunit ABB88_RS04800 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABB88_RS04805 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABB88_RS04810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABB88_RS04810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABB88_RS04820 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS04825 PF03466 LysR substrate binding domain ABB88_RS04835 PF01925 Sulfite exporter TauE/SafE ABB88_RS04840 PF00043 Glutathione S-transferase, C-terminal domain ABB88_RS04840 PF13417 Glutathione S-transferase, N-terminal domain ABB88_RS04845 PF00206 Lyase ABB88_RS04845 PF08328 Adenylosuccinate lyase C-terminal ABB88_RS04850 PF01322 Cytochrome C' ABB88_RS04870 PF01594 AI-2E family transporter ABB88_RS04880 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS04880 PF07729 FCD domain ABB88_RS04890 PF01425 Amidase ABB88_RS04895 PF02515 CoA-transferase family III ABB88_RS04900 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS04920 PF00005 ABC transporter ABB88_RS04935 PF01614 Bacterial transcriptional regulator ABB88_RS04935 PF09339 IclR helix-turn-helix domain ABB88_RS04945 PF00501 AMP-binding enzyme ABB88_RS04945 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS04950 PF01042 Endoribonuclease L-PSP ABB88_RS04955 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS04970 PF00005 ABC transporter ABB88_RS04975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABB88_RS04990 PF03466 LysR substrate binding domain ABB88_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS05000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABB88_RS05005 PF07690 Major Facilitator Superfamily ABB88_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS05010 PF03466 LysR substrate binding domain ABB88_RS05025 PF01425 Amidase ABB88_RS05030 PF00677 Lumazine binding domain ABB88_RS05035 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS05040 PF13404 AsnC-type helix-turn-helix domain ABB88_RS05040 PF01037 Lrp/AsnC ligand binding domain ABB88_RS05050 PF00501 AMP-binding enzyme ABB88_RS05050 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS05060 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS05065 PF00005 ABC transporter ABB88_RS05080 PF00107 Zinc-binding dehydrogenase ABB88_RS05080 PF08240 Alcohol dehydrogenase GroES-like domain ABB88_RS05100 PF00403 Heavy-metal-associated domain ABB88_RS05105 PF01966 HD domain ABB88_RS05110 PF00155 Aminotransferase class I and II ABB88_RS05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS05115 PF03466 LysR substrate binding domain ABB88_RS05125 PF00083 Sugar (and other) transporter ABB88_RS05145 PF13609 Gram-negative porin ABB88_RS05150 PF02548 Ketopantoate hydroxymethyltransferase ABB88_RS05155 PF03466 LysR substrate binding domain ABB88_RS05155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS05220 PF00440 Bacterial regulatory proteins, tetR family ABB88_RS05230 PF05170 AsmA family ABB88_RS05235 PF03352 Methyladenine glycosylase ABB88_RS05240 PF00376 MerR family regulatory protein ABB88_RS05240 PF09278 MerR, DNA binding ABB88_RS05255 PF01547 Bacterial extracellular solute-binding protein ABB88_RS05265 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS05265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABB88_RS05270 PF00005 ABC transporter ABB88_RS05270 PF08402 TOBE domain ABB88_RS05275 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS05280 PF14785 Maltose transport system permease protein MalF P2 domain ABB88_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS05300 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS05305 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS05305 PF07729 FCD domain ABB88_RS05335 PF00465 Iron-containing alcohol dehydrogenase ABB88_RS05350 PF03180 NLPA lipoprotein ABB88_RS05355 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS05360 PF09383 NIL domain ABB88_RS05360 PF00005 ABC transporter ABB88_RS05365 PF13802 Galactose mutarotase-like ABB88_RS05365 PF01055 Glycosyl hydrolases family 31 ABB88_RS05375 PF00459 Inositol monophosphatase family ABB88_RS05390 PF00501 AMP-binding enzyme ABB88_RS05390 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS05395 PF07687 Peptidase dimerisation domain ABB88_RS05395 PF01546 Peptidase family M20/M25/M40 ABB88_RS05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS05400 PF03466 LysR substrate binding domain ABB88_RS05405 PF03601 Conserved hypothetical protein 698 ABB88_RS05410 PF03061 Thioesterase superfamily ABB88_RS05415 PF01769 Divalent cation transporter ABB88_RS05415 PF00571 CBS domain ABB88_RS05415 PF03448 MgtE intracellular N domain ABB88_RS05435 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS05445 PF02609 Exonuclease VII small subunit ABB88_RS05450 PF00348 Polyprenyl synthetase ABB88_RS05455 PF02779 Transketolase, pyrimidine binding domain ABB88_RS05455 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABB88_RS05455 PF02780 Transketolase, C-terminal domain ABB88_RS05460 PF02649 Type I GTP cyclohydrolase folE2 ABB88_RS05465 PF01250 Ribosomal protein S6 ABB88_RS05475 PF01084 Ribosomal protein S18 ABB88_RS05480 PF03948 Ribosomal protein L9, C-terminal domain ABB88_RS05480 PF01281 Ribosomal protein L9, N-terminal domain ABB88_RS05490 PF00772 DnaB-like helicase N terminal domain ABB88_RS05490 PF03796 DnaB-like helicase C terminal domain ABB88_RS05495 PF13593 SBF-like CPA transporter family (DUF4137) ABB88_RS05500 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABB88_RS05505 PF13638 PIN domain ABB88_RS05505 PF02562 PhoH-like protein ABB88_RS05510 PF00578 AhpC/TSA family ABB88_RS05515 PF04430 Protein of unknown function (DUF498/DUF598) ABB88_RS05520 PF00155 Aminotransferase class I and II ABB88_RS05525 PF01842 ACT domain ABB88_RS05525 PF00742 Homoserine dehydrogenase ABB88_RS05525 PF03447 Homoserine dehydrogenase, NAD binding domain ABB88_RS05530 PF14821 Threonine synthase N terminus ABB88_RS05530 PF00291 Pyridoxal-phosphate dependent enzyme ABB88_RS05545 PF02615 Malate/L-lactate dehydrogenase ABB88_RS05555 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS05570 PF03328 HpcH/HpaI aldolase/citrate lyase family ABB88_RS05575 PF01649 Ribosomal protein S20 ABB88_RS05585 PF03023 Lipid II flippase MurJ ABB88_RS05590 PF00106 short chain dehydrogenase ABB88_RS05595 PF05191 Adenylate kinase, active site lid ABB88_RS05600 PF02348 Cytidylyltransferase ABB88_RS05605 PF03966 Trm112p-like protein ABB88_RS05610 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABB88_RS05615 PF02472 Biopolymer transport protein ExbD/TolR ABB88_RS05620 PF01618 MotA/TolQ/ExbB proton channel family ABB88_RS05630 PF02601 Exonuclease VII, large subunit ABB88_RS05630 PF13742 OB-fold nucleic acid binding domain ABB88_RS05635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABB88_RS05635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABB88_RS05640 PF00654 Voltage gated chloride channel ABB88_RS05645 PF00108 Thiolase, N-terminal domain ABB88_RS05645 PF02803 Thiolase, C-terminal domain ABB88_RS05655 PF00313 'Cold-shock' DNA-binding domain ABB88_RS05660 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABB88_RS05665 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ABB88_RS05665 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ABB88_RS05665 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ABB88_RS05665 PF00207 Alpha-2-macroglobulin family ABB88_RS05665 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ABB88_RS05665 PF07703 Alpha-2-macroglobulin bait region domain ABB88_RS05665 PF01835 MG2 domain ABB88_RS05665 PF17962 Bacterial macroglobulin domain 6 ABB88_RS05670 PF06832 Penicillin-Binding Protein C-terminus Family ABB88_RS05670 PF00912 Transglycosylase ABB88_RS05670 PF00905 Penicillin binding protein transpeptidase domain ABB88_RS05675 PF00004 ATPase family associated with various cellular activities (AAA) ABB88_RS05675 PF07724 AAA domain (Cdc48 subfamily) ABB88_RS05675 PF17871 AAA lid domain ABB88_RS05675 PF02861 Clp amino terminal domain, pathogenicity island component ABB88_RS05675 PF10431 C-terminal, D2-small domain, of ClpB protein ABB88_RS05680 PF04403 Paraquat-inducible protein A ABB88_RS05685 PF02470 MlaD protein ABB88_RS05695 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABB88_RS05695 PF14850 DNA-binding domain of Proline dehydrogenase ABB88_RS05695 PF00171 Aldehyde dehydrogenase family ABB88_RS05695 PF01619 Proline dehydrogenase ABB88_RS05705 PF13458 Periplasmic binding protein ABB88_RS05710 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS05715 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS05715 PF11862 Domain of unknown function (DUF3382) ABB88_RS05720 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS05720 PF00005 ABC transporter ABB88_RS05725 PF00005 ABC transporter ABB88_RS05730 PF07690 Major Facilitator Superfamily ABB88_RS05735 PF00440 Bacterial regulatory proteins, tetR family ABB88_RS05745 PF03212 Pertactin ABB88_RS05745 PF03797 Autotransporter beta-domain ABB88_RS05755 PF00543 Nitrogen regulatory protein P-II ABB88_RS05760 PF04380 Membrane fusogenic activity ABB88_RS05775 PF00083 Sugar (and other) transporter ABB88_RS05775 PF07690 Major Facilitator Superfamily ABB88_RS05785 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABB88_RS05790 PF00510 Cytochrome c oxidase subunit III ABB88_RS05795 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABB88_RS05800 PF02104 SURF1 family ABB88_RS05825 PF13411 MerR HTH family regulatory protein ABB88_RS05830 PF00403 Heavy-metal-associated domain ABB88_RS05850 PF04055 Radical SAM superfamily ABB88_RS05850 PF06968 Biotin and Thiamin Synthesis associated domain ABB88_RS05865 PF08534 Redoxin ABB88_RS05875 PF01738 Dienelactone hydrolase family ABB88_RS05885 PF01967 MoaC family ABB88_RS05895 PF02391 MoaE protein ABB88_RS05900 PF00994 Probable molybdopterin binding domain ABB88_RS05905 PF03454 MoeA C-terminal region (domain IV) ABB88_RS05905 PF00994 Probable molybdopterin binding domain ABB88_RS05905 PF03453 MoeA N-terminal region (domain I and II) ABB88_RS05910 PF04055 Radical SAM superfamily ABB88_RS05910 PF06463 Molybdenum Cofactor Synthesis C ABB88_RS05930 PF14698 Argininosuccinate lyase C-terminal ABB88_RS05930 PF00206 Lyase ABB88_RS05935 PF00924 Mechanosensitive ion channel ABB88_RS05940 PF02540 NAD synthase ABB88_RS05940 PF00795 Carbon-nitrogen hydrolase ABB88_RS05945 PF00543 Nitrogen regulatory protein P-II ABB88_RS05970 PF03466 LysR substrate binding domain ABB88_RS05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS05980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS05990 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS05990 PF12911 N-terminal TM domain of oligopeptide transport permease C ABB88_RS05995 PF03193 RsgA GTPase ABB88_RS06000 PF01435 Peptidase family M48 ABB88_RS06005 PF00929 Exonuclease ABB88_RS06010 PF03853 YjeF-related protein N-terminus ABB88_RS06015 PF07848 PaaX-like protein ABB88_RS06015 PF08223 PaaX-like protein C-terminal domain ABB88_RS06020 PF05138 Phenylacetic acid catabolic protein ABB88_RS06025 PF06243 Phenylacetic acid degradation B ABB88_RS06030 PF05138 Phenylacetic acid catabolic protein ABB88_RS06035 PF01883 Iron-sulfur cluster assembly protein ABB88_RS06040 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS06040 PF00970 Oxidoreductase FAD-binding domain ABB88_RS06040 PF00175 Oxidoreductase NAD-binding domain ABB88_RS06050 PF00171 Aldehyde dehydrogenase family ABB88_RS06055 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS06060 PF03061 Thioesterase superfamily ABB88_RS06065 PF00501 AMP-binding enzyme ABB88_RS06065 PF14535 AMP-binding enzyme C-terminal domain ABB88_RS06070 PF16970 Type-1 fimbrial protein, A ABB88_RS06090 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS06095 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABB88_RS06095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS06100 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABB88_RS06105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABB88_RS06105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABB88_RS06105 PF02769 AIR synthase related protein, C-terminal domain ABB88_RS06110 PF13332 Hemagglutinin repeat ABB88_RS06110 PF05860 haemagglutination activity domain ABB88_RS06110 PF13018 Extended Signal Peptide of Type V secretion system ABB88_RS06110 PF05594 Haemagluttinin repeat ABB88_RS06135 PF00596 Class II Aldolase and Adducin N-terminal domain ABB88_RS06140 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS06145 PF01242 6-pyruvoyl tetrahydropterin synthase ABB88_RS06155 PF00472 RF-1 domain ABB88_RS06175 PF00701 Dihydrodipicolinate synthetase family ABB88_RS06180 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS06205 PF14537 Cytochrome c3 ABB88_RS06205 PF00890 FAD binding domain ABB88_RS06210 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS06225 PF01266 FAD dependent oxidoreductase ABB88_RS06225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABB88_RS06230 PF08220 DeoR-like helix-turn-helix domain ABB88_RS06230 PF00455 DeoR C terminal sensor domain ABB88_RS06235 PF00005 ABC transporter ABB88_RS06235 PF17912 MalK OB fold domain ABB88_RS06240 PF00005 ABC transporter ABB88_RS06240 PF17912 MalK OB fold domain ABB88_RS06250 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS06275 PF01037 Lrp/AsnC ligand binding domain ABB88_RS06280 PF01266 FAD dependent oxidoreductase ABB88_RS06285 PF00149 Calcineurin-like phosphoesterase ABB88_RS06285 PF12320 Type 5 capsule protein repressor C-terminal domain ABB88_RS06325 PF00478 IMP dehydrogenase / GMP reductase domain ABB88_RS06325 PF00571 CBS domain ABB88_RS06330 PF00117 Glutamine amidotransferase class-I ABB88_RS06330 PF00958 GMP synthase C terminal domain ABB88_RS06330 PF02540 NAD synthase ABB88_RS06345 PF13657 HipA N-terminal domain ABB88_RS06345 PF07804 HipA-like C-terminal domain ABB88_RS06355 PF07690 Major Facilitator Superfamily ABB88_RS06370 PF01979 Amidohydrolase family ABB88_RS06380 PF00005 ABC transporter ABB88_RS06385 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS06410 PF01965 DJ-1/PfpI family ABB88_RS06420 PF01740 STAS domain ABB88_RS06420 PF00916 Sulfate permease family ABB88_RS06425 PF10996 Beta-Casp domain ABB88_RS06425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABB88_RS06425 PF00753 Metallo-beta-lactamase superfamily ABB88_RS06445 PF12706 Beta-lactamase superfamily domain ABB88_RS06450 PF01965 DJ-1/PfpI family ABB88_RS06450 PF12833 Helix-turn-helix domain ABB88_RS06455 PF03466 LysR substrate binding domain ABB88_RS06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS06470 PF00107 Zinc-binding dehydrogenase ABB88_RS06470 PF08240 Alcohol dehydrogenase GroES-like domain ABB88_RS06475 PF07690 Major Facilitator Superfamily ABB88_RS06480 PF00155 Aminotransferase class I and II ABB88_RS06480 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS06490 PF01810 LysE type translocator ABB88_RS06500 PF01546 Peptidase family M20/M25/M40 ABB88_RS06500 PF07687 Peptidase dimerisation domain ABB88_RS06505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS06510 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS06515 PF12911 N-terminal TM domain of oligopeptide transport permease C ABB88_RS06520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS06520 PF00005 ABC transporter ABB88_RS06525 PF00356 Bacterial regulatory proteins, lacI family ABB88_RS06555 PF09335 SNARE associated Golgi protein ABB88_RS06570 PF13847 Methyltransferase domain ABB88_RS06585 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS06585 PF00155 Aminotransferase class I and II ABB88_RS06595 PF00692 dUTPase ABB88_RS06610 PF01632 Ribosomal protein L35 ABB88_RS06615 PF00453 Ribosomal protein L20 ABB88_RS06620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABB88_RS06620 PF01409 tRNA synthetases class II core domain (F) ABB88_RS06625 PF03483 B3/4 domain ABB88_RS06625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABB88_RS06625 PF01588 Putative tRNA binding domain ABB88_RS06625 PF03147 Ferredoxin-fold anticodon binding domain ABB88_RS06625 PF03484 tRNA synthetase B5 domain ABB88_RS06630 PF00216 Bacterial DNA-binding protein ABB88_RS06680 PF04231 Endonuclease I ABB88_RS06700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABB88_RS06700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABB88_RS06705 PF04381 Putative exonuclease, RdgC ABB88_RS06715 PF02515 CoA-transferase family III ABB88_RS06720 PF03466 LysR substrate binding domain ABB88_RS06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS06740 PF00106 short chain dehydrogenase ABB88_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS06755 PF00005 ABC transporter ABB88_RS06755 PF08402 TOBE domain ABB88_RS06760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABB88_RS06760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABB88_RS06760 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS06765 PF00083 Sugar (and other) transporter ABB88_RS06765 PF08946 Osmosensory transporter coiled coil ABB88_RS06770 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS06775 PF00072 Response regulator receiver domain ABB88_RS06775 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS06780 PF00154 recA bacterial DNA recombination protein ABB88_RS06785 PF02631 RecX family ABB88_RS06790 PF03466 LysR substrate binding domain ABB88_RS06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS06795 PF01717 Cobalamin-independent synthase, Catalytic domain ABB88_RS06795 PF08267 Cobalamin-independent synthase, N-terminal domain ABB88_RS06805 PF08442 ATP-grasp domain ABB88_RS06805 PF00549 CoA-ligase ABB88_RS06810 PF00549 CoA-ligase ABB88_RS06810 PF02629 CoA binding domain ABB88_RS06815 PF03741 Integral membrane protein TerC family ABB88_RS06820 PF03741 Integral membrane protein TerC family ABB88_RS06825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABB88_RS06825 PF03900 Porphobilinogen deaminase, C-terminal domain ABB88_RS06845 PF00719 Inorganic pyrophosphatase ABB88_RS06850 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABB88_RS06885 PF13629 Pilus formation protein N terminal region ABB88_RS06885 PF00263 Bacterial type II and III secretion system protein ABB88_RS06885 PF04972 BON domain ABB88_RS06890 PF00437 Type II/IV secretion system protein ABB88_RS06910 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS06915 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABB88_RS06915 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABB88_RS06920 PF02615 Malate/L-lactate dehydrogenase ABB88_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS06925 PF03466 LysR substrate binding domain ABB88_RS06935 PF01266 FAD dependent oxidoreductase ABB88_RS06940 PF04267 Sarcosine oxidase, delta subunit family ABB88_RS06945 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS06945 PF17806 Sarcosine oxidase A3 domain ABB88_RS06945 PF08669 Glycine cleavage T-protein C-terminal barrel domain ABB88_RS06945 PF01571 Aminomethyltransferase folate-binding domain ABB88_RS06955 PF00551 Formyl transferase ABB88_RS06960 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS06970 PF00561 alpha/beta hydrolase fold ABB88_RS06980 PF01565 FAD binding domain ABB88_RS06980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABB88_RS06985 PF01113 Dihydrodipicolinate reductase, N-terminus ABB88_RS06985 PF05173 Dihydrodipicolinate reductase, C-terminus ABB88_RS06990 PF04355 SmpA / OmlA family ABB88_RS06995 PF01475 Ferric uptake regulator family ABB88_RS07000 PF02463 RecF/RecN/SMC N terminal domain ABB88_RS07005 PF01513 ATP-NAD kinase ABB88_RS07010 PF01628 HrcA protein C terminal domain ABB88_RS07010 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ABB88_RS07015 PF00762 Ferrochelatase ABB88_RS07025 PF01025 GrpE ABB88_RS07035 PF00012 Hsp70 protein ABB88_RS07040 PF00684 DnaJ central domain ABB88_RS07040 PF01556 DnaJ C terminal domain ABB88_RS07040 PF00226 DnaJ domain ABB88_RS07045 PF00675 Insulinase (Peptidase family M16) ABB88_RS07045 PF05193 Peptidase M16 inactive domain ABB88_RS07065 PF17862 AAA+ lid domain ABB88_RS07065 PF00004 ATPase family associated with various cellular activities (AAA) ABB88_RS07065 PF01434 Peptidase family M41 ABB88_RS07075 PF00034 Cytochrome c ABB88_RS07090 PF00180 Isocitrate/isopropylmalate dehydrogenase ABB88_RS07110 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS07110 PF00072 Response regulator receiver domain ABB88_RS07120 PF02669 K+-transporting ATPase, c chain ABB88_RS07130 PF03814 Potassium-transporting ATPase A subunit ABB88_RS07145 PF00474 Sodium:solute symporter family ABB88_RS07160 PF00893 Small Multidrug Resistance protein ABB88_RS07165 PF01713 Smr domain ABB88_RS07165 PF00488 MutS domain V ABB88_RS07170 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS07175 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABB88_RS07175 PF17854 FtsK alpha domain ABB88_RS07175 PF09397 Ftsk gamma domain ABB88_RS07175 PF01580 FtsK/SpoIIIE family ABB88_RS07180 PF03548 Outer membrane lipoprotein carrier protein LolA ABB88_RS07185 PF16193 AAA C-terminal domain ABB88_RS07185 PF12002 MgsA AAA+ ATPase C terminal ABB88_RS07185 PF00004 ATPase family associated with various cellular activities (AAA) ABB88_RS07190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABB88_RS07190 PF02403 Seryl-tRNA synthetase N-terminal domain ABB88_RS07215 PF17151 Periplasmic sensor domain ABB88_RS07215 PF00990 Diguanylate cyclase, GGDEF domain ABB88_RS07230 PF07660 Secretin and TonB N terminus short domain ABB88_RS07230 PF00593 TonB dependent receptor ABB88_RS07230 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS07235 PF07690 Major Facilitator Superfamily ABB88_RS07255 PF04183 IucA / IucC family ABB88_RS07255 PF06276 Ferric iron reductase FhuF-like transporter ABB88_RS07265 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABB88_RS07275 PF00999 Sodium/hydrogen exchanger family ABB88_RS07275 PF02254 TrkA-N domain ABB88_RS07280 PF00106 short chain dehydrogenase ABB88_RS07290 PF03883 Peroxide stress protein YaaA ABB88_RS07310 PF00990 Diguanylate cyclase, GGDEF domain ABB88_RS07320 PF04055 Radical SAM superfamily ABB88_RS07320 PF06969 HemN C-terminal domain ABB88_RS07330 PF00196 Bacterial regulatory proteins, luxR family ABB88_RS07335 PF02824 TGS domain ABB88_RS07335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABB88_RS07335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABB88_RS07335 PF03129 Anticodon binding domain ABB88_RS07340 PF05198 Translation initiation factor IF-3, N-terminal domain ABB88_RS07340 PF00707 Translation initiation factor IF-3, C-terminal domain ABB88_RS07345 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABB88_RS07345 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABB88_RS07355 PF00381 PTS HPr component phosphorylation site ABB88_RS07360 PF02896 PEP-utilising enzyme, TIM barrel domain ABB88_RS07360 PF00391 PEP-utilising enzyme, mobile domain ABB88_RS07360 PF05524 PEP-utilising enzyme, N-terminal ABB88_RS07370 PF02566 OsmC-like protein ABB88_RS07375 PF02423 Ornithine cyclodeaminase/mu-crystallin family ABB88_RS07385 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS07390 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS07395 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS07400 PF00005 ABC transporter ABB88_RS07415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABB88_RS07415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABB88_RS07425 PF02293 AmiS/UreI family transporter ABB88_RS07430 PF03069 Acetamidase/Formamidase family ABB88_RS07445 PF01116 Fructose-bisphosphate aldolase class-II ABB88_RS07455 PF01259 SAICAR synthetase ABB88_RS07460 PF15723 Motility quorum-sensing regulator, toxin of MqsA ABB88_RS07465 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ABB88_RS07475 PF02600 Disulfide bond formation protein DsbB ABB88_RS07480 PF00731 AIR carboxylase ABB88_RS07485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABB88_RS07485 PF02222 ATP-grasp domain ABB88_RS07490 PF03481 Putative GTP-binding controlling metal-binding ABB88_RS07490 PF01300 Telomere recombination ABB88_RS07495 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS07500 PF01614 Bacterial transcriptional regulator ABB88_RS07500 PF09339 IclR helix-turn-helix domain ABB88_RS07505 PF00491 Arginase family ABB88_RS07510 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS07520 PF00005 ABC transporter ABB88_RS07525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS07525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS07535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS07535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS07535 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS07540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS07540 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS07540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS07545 PF03466 LysR substrate binding domain ABB88_RS07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS07550 PF02899 Phage integrase, N-terminal SAM-like domain ABB88_RS07550 PF00589 Phage integrase family ABB88_RS07555 PF04073 Aminoacyl-tRNA editing domain ABB88_RS07560 PF01174 SNO glutamine amidotransferase family ABB88_RS07575 PF00768 D-alanyl-D-alanine carboxypeptidase ABB88_RS07585 PF07690 Major Facilitator Superfamily ABB88_RS07595 PF13361 UvrD-like helicase C-terminal domain ABB88_RS07595 PF12705 PD-(D/E)XK nuclease superfamily ABB88_RS07595 PF00580 UvrD/REP helicase N-terminal domain ABB88_RS07610 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABB88_RS07610 PF12169 DNA polymerase III subunits gamma and tau domain III ABB88_RS07610 PF12170 DNA polymerase III tau subunit V interacting with alpha ABB88_RS07615 PF02575 YbaB/EbfC DNA-binding family ABB88_RS07620 PF13662 Toprim domain ABB88_RS07620 PF02132 RecR protein ABB88_RS07640 PF04228 Putative neutral zinc metallopeptidase ABB88_RS07645 PF01300 Telomere recombination ABB88_RS07685 PF03358 NADPH-dependent FMN reductase ABB88_RS07690 PF07311 Dodecin ABB88_RS07695 PF05190 MutS family domain IV ABB88_RS07695 PF01624 MutS domain I ABB88_RS07695 PF05192 MutS domain III ABB88_RS07695 PF05188 MutS domain II ABB88_RS07695 PF00488 MutS domain V ABB88_RS07700 PF08007 Cupin superfamily protein ABB88_RS07705 PF16970 Type-1 fimbrial protein, A ABB88_RS07710 PF06804 NlpB/DapX lipoprotein ABB88_RS07715 PF00701 Dihydrodipicolinate synthetase family ABB88_RS07720 PF02163 Peptidase family M50 ABB88_RS07720 PF17820 PDZ domain ABB88_RS07735 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS07745 PF00005 ABC transporter ABB88_RS07750 PF02824 TGS domain ABB88_RS07750 PF04607 Region found in RelA / SpoT proteins ABB88_RS07750 PF13291 ACT domain ABB88_RS07755 PF01192 RNA polymerase Rpb6 ABB88_RS07760 PF00625 Guanylate kinase ABB88_RS07765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABB88_RS07770 PF00034 Cytochrome c ABB88_RS07780 PF00877 NlpC/P60 family ABB88_RS07785 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ABB88_RS07785 PF01048 Phosphorylase superfamily ABB88_RS07805 PF03755 YicC-like family, N-terminal region ABB88_RS07805 PF08340 Domain of unknown function (DUF1732) ABB88_RS07810 PF03725 3' exoribonuclease family, domain 2 ABB88_RS07810 PF01138 3' exoribonuclease family, domain 1 ABB88_RS07820 PF03466 LysR substrate binding domain ABB88_RS07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS07825 PF00672 HAMP domain ABB88_RS07825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABB88_RS07825 PF02203 Tar ligand binding domain homologue ABB88_RS07830 PF00672 HAMP domain ABB88_RS07830 PF00563 EAL domain ABB88_RS07830 PF17154 Gammaproteobacterial periplasmic sensor domain ABB88_RS07830 PF00990 Diguanylate cyclase, GGDEF domain ABB88_RS07835 PF01725 Ham1 family ABB88_RS07845 PF06969 HemN C-terminal domain ABB88_RS07845 PF04055 Radical SAM superfamily ABB88_RS07850 PF03951 Glutamine synthetase, beta-Grasp domain ABB88_RS07850 PF00120 Glutamine synthetase, catalytic domain ABB88_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS07855 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS07855 PF00989 PAS fold ABB88_RS07860 PF00158 Sigma-54 interaction domain ABB88_RS07860 PF00072 Response regulator receiver domain ABB88_RS07860 PF02954 Bacterial regulatory protein, Fis family ABB88_RS07865 PF03466 LysR substrate binding domain ABB88_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS07870 PF17954 Quercetinase C-terminal cupin domain ABB88_RS07870 PF02678 Pirin ABB88_RS07875 PF02678 Pirin ABB88_RS07875 PF05726 Pirin C-terminal cupin domain ABB88_RS07885 PF00005 ABC transporter ABB88_RS07885 PF08402 TOBE domain ABB88_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS07900 PF00970 Oxidoreductase FAD-binding domain ABB88_RS07900 PF00175 Oxidoreductase NAD-binding domain ABB88_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS07905 PF03466 LysR substrate binding domain ABB88_RS07915 PF00248 Aldo/keto reductase family ABB88_RS07925 PF01042 Endoribonuclease L-PSP ABB88_RS07930 PF00271 Helicase conserved C-terminal domain ABB88_RS07930 PF00270 DEAD/DEAH box helicase ABB88_RS07930 PF17191 RecG wedge domain ABB88_RS07935 PF03466 LysR substrate binding domain ABB88_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS07940 PF03466 LysR substrate binding domain ABB88_RS07945 PF00171 Aldehyde dehydrogenase family ABB88_RS07950 PF00210 Ferritin-like domain ABB88_RS07970 PF00535 Glycosyl transferase family 2 ABB88_RS07980 PF00005 ABC transporter ABB88_RS07990 PF00534 Glycosyl transferases group 1 ABB88_RS08000 PF02563 Polysaccharide biosynthesis/export protein ABB88_RS08005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABB88_RS08005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABB88_RS08005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABB88_RS08010 PF01370 NAD dependent epimerase/dehydratase family ABB88_RS08015 PF05159 Capsule polysaccharide biosynthesis protein ABB88_RS08020 PF05159 Capsule polysaccharide biosynthesis protein ABB88_RS08030 PF00106 short chain dehydrogenase ABB88_RS08045 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS08045 PF14759 Reductase C-terminal ABB88_RS08055 PF00005 ABC transporter ABB88_RS08060 PF00005 ABC transporter ABB88_RS08060 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS08065 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS08065 PF11862 Domain of unknown function (DUF3382) ABB88_RS08075 PF03741 Integral membrane protein TerC family ABB88_RS08085 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS08100 PF07726 ATPase family associated with various cellular activities (AAA) ABB88_RS08100 PF17863 AAA lid domain ABB88_RS08135 PF00884 Sulfatase ABB88_RS08160 PF00072 Response regulator receiver domain ABB88_RS08160 PF00196 Bacterial regulatory proteins, luxR family ABB88_RS08165 PF00082 Subtilase family ABB88_RS08165 PF12951 Passenger-associated-transport-repeat ABB88_RS08165 PF03797 Autotransporter beta-domain ABB88_RS08170 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ABB88_RS08175 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system ABB88_RS08180 PF00043 Glutathione S-transferase, C-terminal domain ABB88_RS08180 PF02798 Glutathione S-transferase, N-terminal domain ABB88_RS08185 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABB88_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS08190 PF03466 LysR substrate binding domain ABB88_RS08195 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS08205 PF01070 FMN-dependent dehydrogenase ABB88_RS08210 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABB88_RS08225 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS08230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS08230 PF03466 LysR substrate binding domain ABB88_RS08235 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS08260 PF03358 NADPH-dependent FMN reductase ABB88_RS08280 PF07969 Amidohydrolase family ABB88_RS08285 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS08295 PF03466 LysR substrate binding domain ABB88_RS08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS08310 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS08315 PF13244 Domain of unknown function (DUF4040) ABB88_RS08315 PF00361 Proton-conducting membrane transporter ABB88_RS08315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABB88_RS08315 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABB88_RS08320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABB88_RS08325 PF00361 Proton-conducting membrane transporter ABB88_RS08330 PF01899 Na+/H+ ion antiporter subunit ABB88_RS08335 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABB88_RS08360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABB88_RS08365 PF02016 LD-carboxypeptidase N-terminal domain ABB88_RS08365 PF17676 LD-carboxypeptidase C-terminal domain ABB88_RS08370 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS08375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS08385 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS08390 PF00005 ABC transporter ABB88_RS08390 PF12848 ABC transporter ABB88_RS08395 PF00005 ABC transporter ABB88_RS08425 PF00175 Oxidoreductase NAD-binding domain ABB88_RS08425 PF00042 Globin ABB88_RS08425 PF00970 Oxidoreductase FAD-binding domain ABB88_RS08430 PF02082 Transcriptional regulator ABB88_RS08435 PF01266 FAD dependent oxidoreductase ABB88_RS08450 PF01571 Aminomethyltransferase folate-binding domain ABB88_RS08455 PF02618 YceG-like family ABB88_RS08460 PF02223 Thymidylate kinase ABB88_RS08465 PF12169 DNA polymerase III subunits gamma and tau domain III ABB88_RS08470 PF01026 TatD related DNase ABB88_RS08485 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS08495 PF00005 ABC transporter ABB88_RS08500 PF00491 Arginase family ABB88_RS08505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABB88_RS08505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABB88_RS08510 PF00171 Aldehyde dehydrogenase family ABB88_RS08515 PF07687 Peptidase dimerisation domain ABB88_RS08515 PF01546 Peptidase family M20/M25/M40 ABB88_RS08520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS08520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS08520 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS08530 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABB88_RS08530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS08540 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS08540 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABB88_RS08545 PF07729 FCD domain ABB88_RS08545 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS08555 PF04343 Protein of unknown function, DUF488 ABB88_RS08560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABB88_RS08580 PF01425 Amidase ABB88_RS08585 PF07286 Protein of unknown function (DUF1445) ABB88_RS08595 PF01627 Hpt domain ABB88_RS08595 PF00989 PAS fold ABB88_RS08595 PF00072 Response regulator receiver domain ABB88_RS08595 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS08595 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS08600 PF00072 Response regulator receiver domain ABB88_RS08600 PF00196 Bacterial regulatory proteins, luxR family ABB88_RS08605 PF05860 haemagglutination activity domain ABB88_RS08605 PF13018 Extended Signal Peptide of Type V secretion system ABB88_RS08605 PF13332 Hemagglutinin repeat ABB88_RS08605 PF05594 Haemagluttinin repeat ABB88_RS08615 PF16970 Type-1 fimbrial protein, A ABB88_RS08620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABB88_RS08620 PF02753 Pili assembly chaperone PapD, C-terminal domain ABB88_RS08625 PF13953 PapC C-terminal domain ABB88_RS08625 PF13954 PapC N-terminal domain ABB88_RS08625 PF00577 Outer membrane usher protein ABB88_RS08630 PF00419 Fimbrial protein ABB88_RS08635 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ABB88_RS08635 PF08479 POTRA domain, ShlB-type ABB88_RS08635 PF17287 POTRA domain ABB88_RS08650 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS08675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS08675 PF03466 LysR substrate binding domain ABB88_RS08685 PF05378 Hydantoinase/oxoprolinase N-terminal region ABB88_RS08685 PF01968 Hydantoinase/oxoprolinase ABB88_RS08700 PF00924 Mechanosensitive ion channel ABB88_RS08700 PF05552 Conserved TM helix ABB88_RS08710 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS08715 PF00588 SpoU rRNA Methylase family ABB88_RS08720 PF00459 Inositol monophosphatase family ABB88_RS08725 PF03741 Integral membrane protein TerC family ABB88_RS08725 PF03471 Transporter associated domain ABB88_RS08730 PF02673 Bacitracin resistance protein BacA ABB88_RS08735 PF00149 Calcineurin-like phosphoesterase ABB88_RS08740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABB88_RS08750 PF01406 tRNA synthetases class I (C) catalytic domain ABB88_RS08750 PF09190 DALR domain ABB88_RS08755 PF06029 AlkA N-terminal domain ABB88_RS08755 PF00730 HhH-GPD superfamily base excision DNA repair protein ABB88_RS08755 PF12833 Helix-turn-helix domain ABB88_RS08755 PF02805 Metal binding domain of Ada ABB88_RS08760 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABB88_RS08770 PF01171 PP-loop family ABB88_RS08770 PF09179 TilS substrate binding domain ABB88_RS08775 PF13840 ACT domain ABB88_RS08775 PF01842 ACT domain ABB88_RS08775 PF00696 Amino acid kinase family ABB88_RS08800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABB88_RS08800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABB88_RS08805 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABB88_RS08805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS08810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS08815 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS08820 PF00561 alpha/beta hydrolase fold ABB88_RS08825 PF01958 Domain of unknown function DUF108 ABB88_RS08825 PF03447 Homoserine dehydrogenase, NAD binding domain ABB88_RS08840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS08840 PF03466 LysR substrate binding domain ABB88_RS08860 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS08865 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS08870 PF08402 TOBE domain ABB88_RS08870 PF00005 ABC transporter ABB88_RS08880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABB88_RS08880 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS08885 PF01614 Bacterial transcriptional regulator ABB88_RS08885 PF09339 IclR helix-turn-helix domain ABB88_RS08890 PF13380 CoA binding domain ABB88_RS08895 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS08900 PF01042 Endoribonuclease L-PSP ABB88_RS08925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABB88_RS08935 PF00535 Glycosyl transferase family 2 ABB88_RS08940 PF01522 Polysaccharide deacetylase ABB88_RS08940 PF14883 Hypothetical glycosyl hydrolase family 13 ABB88_RS08960 PF12802 MarR family ABB88_RS08965 PF00072 Response regulator receiver domain ABB88_RS08965 PF00196 Bacterial regulatory proteins, luxR family ABB88_RS08975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABB88_RS08975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABB88_RS08975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABB88_RS08975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABB88_RS08980 PF00342 Phosphoglucose isomerase ABB88_RS08985 PF00132 Bacterial transferase hexapeptide (six repeats) ABB88_RS08995 PF02146 Sir2 family ABB88_RS09000 PF00459 Inositol monophosphatase family ABB88_RS09005 PF00171 Aldehyde dehydrogenase family ABB88_RS09010 PF00202 Aminotransferase class-III ABB88_RS09015 PF00155 Aminotransferase class I and II ABB88_RS09015 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS09025 PF00580 UvrD/REP helicase N-terminal domain ABB88_RS09025 PF13361 UvrD-like helicase C-terminal domain ABB88_RS09030 PF01544 CorA-like Mg2+ transporter protein ABB88_RS09040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS09050 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS09050 PF12911 N-terminal TM domain of oligopeptide transport permease C ABB88_RS09055 PF00005 ABC transporter ABB88_RS09055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS09060 PF01047 MarR family ABB88_RS09075 PF08479 POTRA domain, ShlB-type ABB88_RS09075 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ABB88_RS09080 PF03707 Bacterial signalling protein N terminal repeat ABB88_RS09080 PF00990 Diguanylate cyclase, GGDEF domain ABB88_RS09080 PF00563 EAL domain ABB88_RS09110 PF00263 Bacterial type II and III secretion system protein ABB88_RS09110 PF13629 Pilus formation protein N terminal region ABB88_RS09110 PF04972 BON domain ABB88_RS09120 PF00437 Type II/IV secretion system protein ABB88_RS09150 PF02954 Bacterial regulatory protein, Fis family ABB88_RS09150 PF00072 Response regulator receiver domain ABB88_RS09150 PF00158 Sigma-54 interaction domain ABB88_RS09165 PF08281 Sigma-70, region 4 ABB88_RS09165 PF04542 Sigma-70 region 2 ABB88_RS09175 PF00034 Cytochrome c ABB88_RS09180 PF09285 Elongation factor P, C-terminal ABB88_RS09180 PF08207 Elongation factor P (EF-P) KOW-like domain ABB88_RS09180 PF01132 Elongation factor P (EF-P) OB domain ABB88_RS09195 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABB88_RS09200 PF00330 Aconitase family (aconitate hydratase) ABB88_RS09200 PF00694 Aconitase C-terminal domain ABB88_RS09210 PF00593 TonB dependent receptor ABB88_RS09210 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS09225 PF00691 OmpA family ABB88_RS09235 PF11791 Aconitate B N-terminal domain ABB88_RS09235 PF06434 Aconitate hydratase 2 N-terminus ABB88_RS09235 PF00330 Aconitase family (aconitate hydratase) ABB88_RS09260 PF00892 EamA-like transporter family ABB88_RS09265 PF01925 Sulfite exporter TauE/SafE ABB88_RS09285 PF03466 LysR substrate binding domain ABB88_RS09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS09290 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABB88_RS09290 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABB88_RS09300 PF03466 LysR substrate binding domain ABB88_RS09300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS09345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABB88_RS09345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABB88_RS09350 PF01425 Amidase ABB88_RS09360 PF00171 Aldehyde dehydrogenase family ABB88_RS09375 PF09334 tRNA synthetases class I (M) ABB88_RS09375 PF13603 Leucyl-tRNA synthetase, Domain 2 ABB88_RS09375 PF08264 Anticodon-binding domain of tRNA ABB88_RS09375 PF00133 tRNA synthetases class I (I, L, M and V) ABB88_RS09380 PF07690 Major Facilitator Superfamily ABB88_RS09385 PF01047 MarR family ABB88_RS09405 PF01740 STAS domain ABB88_RS09405 PF00916 Sulfate permease family ABB88_RS09410 PF00471 Ribosomal protein L33 ABB88_RS09415 PF00830 Ribosomal L28 family ABB88_RS09420 PF07690 Major Facilitator Superfamily ABB88_RS09440 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS09445 PF00571 CBS domain ABB88_RS09445 PF00005 ABC transporter ABB88_RS09450 PF01361 Tautomerase enzyme ABB88_RS09455 PF02803 Thiolase, C-terminal domain ABB88_RS09455 PF00108 Thiolase, N-terminal domain ABB88_RS09465 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS09465 PF07729 FCD domain ABB88_RS09475 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS09480 PF00501 AMP-binding enzyme ABB88_RS09480 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS09485 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS09485 PF00501 AMP-binding enzyme ABB88_RS09490 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS09495 PF00080 Copper/zinc superoxide dismutase (SODC) ABB88_RS09510 PF00005 ABC transporter ABB88_RS09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS09515 PF03459 TOBE domain ABB88_RS09535 PF00529 HlyD membrane-fusion protein of T1SS ABB88_RS09535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABB88_RS09540 PF00873 AcrB/AcrD/AcrF family ABB88_RS09545 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ABB88_RS09545 PF02321 Outer membrane efflux protein ABB88_RS09550 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABB88_RS09555 PF01648 4'-phosphopantetheinyl transferase superfamily ABB88_RS09560 PF00933 Glycosyl hydrolase family 3 N terminal domain ABB88_RS09565 PF01541 GIY-YIG catalytic domain ABB88_RS09565 PF02151 UvrB/uvrC motif ABB88_RS09565 PF08459 UvrC Helix-hairpin-helix N-terminal ABB88_RS09570 PF01066 CDP-alcohol phosphatidyltransferase ABB88_RS09585 PF14489 QueF-like protein ABB88_RS09585 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABB88_RS09590 PF00463 Isocitrate lyase family ABB88_RS09605 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS09605 PF11862 Domain of unknown function (DUF3382) ABB88_RS09610 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS09615 PF13458 Periplasmic binding protein ABB88_RS09620 PF00355 Rieske [2Fe-2S] domain ABB88_RS09620 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABB88_RS09625 PF00866 Ring hydroxylating beta subunit ABB88_RS09630 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS09640 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS09645 PF02515 CoA-transferase family III ABB88_RS09650 PF07859 alpha/beta hydrolase fold ABB88_RS09655 PF00501 AMP-binding enzyme ABB88_RS09655 PF14535 AMP-binding enzyme C-terminal domain ABB88_RS09660 PF00108 Thiolase, N-terminal domain ABB88_RS09660 PF02803 Thiolase, C-terminal domain ABB88_RS09680 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS09705 PF01152 Bacterial-like globin ABB88_RS09750 PF01522 Polysaccharide deacetylase ABB88_RS09755 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS09785 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS09785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABB88_RS09810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS09810 PF03466 LysR substrate binding domain ABB88_RS09820 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS09820 PF01799 [2Fe-2S] binding domain ABB88_RS09825 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABB88_RS09835 PF06719 AraC-type transcriptional regulator N-terminus ABB88_RS09835 PF12833 Helix-turn-helix domain ABB88_RS09855 PF07690 Major Facilitator Superfamily ABB88_RS09870 PF00583 Acetyltransferase (GNAT) family ABB88_RS09880 PF00664 ABC transporter transmembrane region ABB88_RS09880 PF00005 ABC transporter ABB88_RS09890 PF02535 ZIP Zinc transporter ABB88_RS09905 PF00916 Sulfate permease family ABB88_RS09905 PF01740 STAS domain ABB88_RS09925 PF03625 Domain of unknown function DUF302 ABB88_RS09925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABB88_RS09935 PF02805 Metal binding domain of Ada ABB88_RS09935 PF12833 Helix-turn-helix domain ABB88_RS09940 PF07237 Protein of unknown function (DUF1428) ABB88_RS09945 PF02567 Phenazine biosynthesis-like protein ABB88_RS09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS09950 PF03466 LysR substrate binding domain ABB88_RS09955 PF04286 Protein of unknown function (DUF445) ABB88_RS09970 PF00171 Aldehyde dehydrogenase family ABB88_RS09975 PF02954 Bacterial regulatory protein, Fis family ABB88_RS09975 PF01590 GAF domain ABB88_RS09975 PF00158 Sigma-54 interaction domain ABB88_RS09995 PF03788 LrgA family ABB88_RS10000 PF13649 Methyltransferase domain ABB88_RS10010 PF00155 Aminotransferase class I and II ABB88_RS10015 PF00202 Aminotransferase class-III ABB88_RS10050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABB88_RS10050 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ABB88_RS10055 PF12801 4Fe-4S binding domain ABB88_RS10055 PF13746 4Fe-4S dicluster domain ABB88_RS10055 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ABB88_RS10080 PF00005 ABC transporter ABB88_RS10085 PF01061 ABC-2 type transporter ABB88_RS10090 PF01594 AI-2E family transporter ABB88_RS10125 PF03979 Sigma-70 factor, region 1.1 ABB88_RS10125 PF00140 Sigma-70 factor, region 1.2 ABB88_RS10125 PF04542 Sigma-70 region 2 ABB88_RS10125 PF04539 Sigma-70 region 3 ABB88_RS10125 PF04546 Sigma-70, non-essential region ABB88_RS10125 PF04545 Sigma-70, region 4 ABB88_RS10130 PF01807 CHC2 zinc finger ABB88_RS10130 PF08278 DNA primase DnaG DnaB-binding ABB88_RS10130 PF10410 DnaB-helicase binding domain of primase ABB88_RS10130 PF08275 DNA primase catalytic core, N-terminal domain ABB88_RS10135 PF01165 Ribosomal protein S21 ABB88_RS10140 PF00156 Phosphoribosyl transferase domain ABB88_RS10145 PF00709 Adenylosuccinate synthetase ABB88_RS10150 PF13393 Histidyl-tRNA synthetase ABB88_RS10155 PF01145 SPFH domain / Band 7 family ABB88_RS10160 PF12221 Bacterial membrane protein N terminal ABB88_RS10160 PF01145 SPFH domain / Band 7 family ABB88_RS10165 PF01926 50S ribosome-binding GTPase ABB88_RS10165 PF16360 GTP-binding GTPase Middle Region ABB88_RS10165 PF13167 GTP-binding GTPase N-terminal ABB88_RS10170 PF17209 Hfq protein ABB88_RS10175 PF00155 Aminotransferase class I and II ABB88_RS10180 PF01926 50S ribosome-binding GTPase ABB88_RS10180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABB88_RS10185 PF13360 PQQ-like domain ABB88_RS10190 PF09976 Tetratricopeptide repeat-like domain ABB88_RS10195 PF13393 Histidyl-tRNA synthetase ABB88_RS10195 PF03129 Anticodon binding domain ABB88_RS10200 PF04551 GcpE protein ABB88_RS10210 PF04055 Radical SAM superfamily ABB88_RS10215 PF00334 Nucleoside diphosphate kinase ABB88_RS10220 PF10458 Valyl tRNA synthetase tRNA binding arm ABB88_RS10220 PF00133 tRNA synthetases class I (I, L, M and V) ABB88_RS10220 PF08264 Anticodon-binding domain of tRNA ABB88_RS10230 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS10230 PF00072 Response regulator receiver domain ABB88_RS10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS10235 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS10235 PF08521 Two-component sensor kinase N-terminal ABB88_RS10255 PF00266 Aminotransferase class-V ABB88_RS10260 PF01746 tRNA (Guanine-1)-methyltransferase ABB88_RS10265 PF01782 RimM N-terminal domain ABB88_RS10270 PF00886 Ribosomal protein S16 ABB88_RS10280 PF01206 Sulfurtransferase TusA ABB88_RS10285 PF01411 tRNA synthetases class II (A) ABB88_RS10285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABB88_RS10285 PF02272 DHHA1 domain ABB88_RS10330 PF01425 Amidase ABB88_RS10335 PF00005 ABC transporter ABB88_RS10335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS10340 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS10345 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS10350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS10370 PF03466 LysR substrate binding domain ABB88_RS10375 PF13416 Bacterial extracellular solute-binding protein ABB88_RS10380 PF01266 FAD dependent oxidoreductase ABB88_RS10385 PF00970 Oxidoreductase FAD-binding domain ABB88_RS10385 PF00175 Oxidoreductase NAD-binding domain ABB88_RS10385 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS10390 PF02261 Aspartate decarboxylase ABB88_RS10405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABB88_RS10410 PF07005 Sugar-binding N-terminal domain ABB88_RS10410 PF17042 Nucleotide-binding C-terminal domain ABB88_RS10415 PF03812 2-keto-3-deoxygluconate permease ABB88_RS10425 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS10435 PF02142 MGS-like domain ABB88_RS10440 PF04384 Iron-sulphur cluster assembly ABB88_RS10445 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS10450 PF00012 Hsp70 protein ABB88_RS10455 PF07743 HSCB C-terminal oligomerisation domain ABB88_RS10460 PF01521 Iron-sulphur cluster biosynthesis ABB88_RS10465 PF01592 NifU-like N terminal domain ABB88_RS10470 PF00266 Aminotransferase class-V ABB88_RS10475 PF02082 Transcriptional regulator ABB88_RS10480 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABB88_RS10485 PF12344 Ultra-violet resistance protein B ABB88_RS10485 PF17757 UvrB interaction domain ABB88_RS10485 PF02151 UvrB/uvrC motif ABB88_RS10485 PF04851 Type III restriction enzyme, res subunit ABB88_RS10485 PF00271 Helicase conserved C-terminal domain ABB88_RS10490 PF00155 Aminotransferase class I and II ABB88_RS10495 PF01726 LexA DNA binding domain ABB88_RS10495 PF00717 Peptidase S24-like ABB88_RS10500 PF03797 Autotransporter beta-domain ABB88_RS10500 PF03212 Pertactin ABB88_RS10525 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS10530 PF01144 Coenzyme A transferase ABB88_RS10535 PF01144 Coenzyme A transferase ABB88_RS10545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS10545 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS10545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS10555 PF02803 Thiolase, C-terminal domain ABB88_RS10555 PF00108 Thiolase, N-terminal domain ABB88_RS10565 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS10570 PF01575 MaoC like domain ABB88_RS10575 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS10580 PF02515 CoA-transferase family III ABB88_RS10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS10585 PF03466 LysR substrate binding domain ABB88_RS10590 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABB88_RS10590 PF00004 ATPase family associated with various cellular activities (AAA) ABB88_RS10590 PF05362 Lon protease (S16) C-terminal proteolytic domain ABB88_RS10595 PF07724 AAA domain (Cdc48 subfamily) ABB88_RS10595 PF06689 ClpX C4-type zinc finger ABB88_RS10595 PF10431 C-terminal, D2-small domain, of ClpB protein ABB88_RS10600 PF00574 Clp protease ABB88_RS10605 PF05697 Bacterial trigger factor protein (TF) ABB88_RS10605 PF05698 Bacterial trigger factor protein (TF) C-terminus ABB88_RS10605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABB88_RS10610 PF03350 Uncharacterized protein family, UPF0114 ABB88_RS10625 PF00313 'Cold-shock' DNA-binding domain ABB88_RS10660 PF00132 Bacterial transferase hexapeptide (six repeats) ABB88_RS10660 PF14602 Hexapeptide repeat of succinyl-transferase ABB88_RS10660 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABB88_RS10665 PF01546 Peptidase family M20/M25/M40 ABB88_RS10665 PF07687 Peptidase dimerisation domain ABB88_RS10670 PF05175 Methyltransferase small domain ABB88_RS10675 PF12848 ABC transporter ABB88_RS10675 PF00005 ABC transporter ABB88_RS10680 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS10685 PF13361 UvrD-like helicase C-terminal domain ABB88_RS10685 PF00580 UvrD/REP helicase N-terminal domain ABB88_RS10705 PF00551 Formyl transferase ABB88_RS10710 PF01687 Riboflavin kinase ABB88_RS10710 PF06574 FAD synthetase ABB88_RS10715 PF08264 Anticodon-binding domain of tRNA ABB88_RS10715 PF06827 Zinc finger found in FPG and IleRS ABB88_RS10715 PF00133 tRNA synthetases class I (I, L, M and V) ABB88_RS10720 PF01252 Signal peptidase (SPase) II ABB88_RS10725 PF04127 DNA / pantothenate metabolism flavoprotein ABB88_RS10725 PF02441 Flavoprotein ABB88_RS10735 PF01037 Lrp/AsnC ligand binding domain ABB88_RS10755 PF13406 Transglycosylase SLT domain ABB88_RS10760 PF04305 Protein of unknown function (DUF455) ABB88_RS10780 PF08443 RimK-like ATP-grasp domain ABB88_RS10780 PF08245 Mur ligase middle domain ABB88_RS10780 PF02875 Mur ligase family, glutamate ligase domain ABB88_RS10785 PF02875 Mur ligase family, glutamate ligase domain ABB88_RS10785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABB88_RS10785 PF08245 Mur ligase middle domain ABB88_RS10790 PF05532 CsbD-like ABB88_RS10800 PF04972 BON domain ABB88_RS10815 PF00005 ABC transporter ABB88_RS10820 PF13472 GDSL-like Lipase/Acylhydrolase family ABB88_RS10825 PF13145 PPIC-type PPIASE domain ABB88_RS10830 PF03009 Glycerophosphoryl diester phosphodiesterase family ABB88_RS10835 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABB88_RS10840 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS10840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABB88_RS10845 PF08534 Redoxin ABB88_RS10845 PF00462 Glutaredoxin ABB88_RS10855 PF09278 MerR, DNA binding ABB88_RS10855 PF00376 MerR family regulatory protein ABB88_RS10860 PF05958 tRNA (Uracil-5-)-methyltransferase ABB88_RS10880 PF01551 Peptidase family M23 ABB88_RS10880 PF01476 LysM domain ABB88_RS10890 PF01975 Survival protein SurE ABB88_RS10895 PF02660 Glycerol-3-phosphate acyltransferase ABB88_RS10905 PF00814 Glycoprotease family ABB88_RS10910 PF00860 Permease family ABB88_RS10920 PF00085 Thioredoxin ABB88_RS10925 PF01205 Uncharacterized protein family UPF0029 ABB88_RS10935 PF00583 Acetyltransferase (GNAT) family ABB88_RS10940 PF12802 MarR family ABB88_RS10950 PF00202 Aminotransferase class-III ABB88_RS10955 PF16868 NMT1-like family ABB88_RS10975 PF03797 Autotransporter beta-domain ABB88_RS10985 PF13091 PLD-like domain ABB88_RS10985 PF13396 Phospholipase_D-nuclease N-terminal ABB88_RS10990 PF01740 STAS domain ABB88_RS10995 PF13581 Histidine kinase-like ATPase domain ABB88_RS11000 PF00842 Alanine racemase, C-terminal domain ABB88_RS11000 PF01168 Alanine racemase, N-terminal domain ABB88_RS11010 PF07228 Stage II sporulation protein E (SpoIIE) ABB88_RS11010 PF00672 HAMP domain ABB88_RS11035 PF04542 Sigma-70 region 2 ABB88_RS11035 PF08281 Sigma-70, region 4 ABB88_RS11040 PF03958 Bacterial type II/III secretion system short domain ABB88_RS11040 PF00263 Bacterial type II and III secretion system protein ABB88_RS11050 PF01312 FlhB HrpN YscU SpaS Family ABB88_RS11055 PF01311 Bacterial export proteins, family 1 ABB88_RS11060 PF01313 Bacterial export proteins, family 3 ABB88_RS11065 PF00813 FliP family ABB88_RS11070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABB88_RS11085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABB88_RS11085 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABB88_RS11085 PF18269 T3SS EscN ATPase C-terminal domain ABB88_RS11090 PF02108 Flagellar assembly protein FliH ABB88_RS11100 PF01514 Secretory protein of YscJ/FliF family ABB88_RS11165 PF00771 FHIPEP family ABB88_RS11200 PF03449 Transcription elongation factor, N-terminal ABB88_RS11200 PF01272 Transcription elongation factor, GreA/GreB, C-term ABB88_RS11205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABB88_RS11205 PF00672 HAMP domain ABB88_RS11205 PF02203 Tar ligand binding domain homologue ABB88_RS11210 PF00860 Permease family ABB88_RS11230 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS11240 PF13419 Haloacid dehalogenase-like hydrolase ABB88_RS11245 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS11250 PF08402 TOBE domain ABB88_RS11250 PF00005 ABC transporter ABB88_RS11255 PF03466 LysR substrate binding domain ABB88_RS11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS11265 PF00581 Rhodanese-like domain ABB88_RS11275 PF01435 Peptidase family M48 ABB88_RS11280 PF00107 Zinc-binding dehydrogenase ABB88_RS11280 PF08240 Alcohol dehydrogenase GroES-like domain ABB88_RS11285 PF00892 EamA-like transporter family ABB88_RS11295 PF01047 MarR family ABB88_RS11305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABB88_RS11305 PF00529 HlyD membrane-fusion protein of T1SS ABB88_RS11310 PF07690 Major Facilitator Superfamily ABB88_RS11315 PF00180 Isocitrate/isopropylmalate dehydrogenase ABB88_RS11320 PF00155 Aminotransferase class I and II ABB88_RS11320 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS11325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS11330 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS11335 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS11335 PF12911 N-terminal TM domain of oligopeptide transport permease C ABB88_RS11340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS11340 PF00005 ABC transporter ABB88_RS11350 PF00202 Aminotransferase class-III ABB88_RS11355 PF07883 Cupin domain ABB88_RS11360 PF00850 Histone deacetylase domain ABB88_RS11365 PF01546 Peptidase family M20/M25/M40 ABB88_RS11365 PF07687 Peptidase dimerisation domain ABB88_RS11375 PF00171 Aldehyde dehydrogenase family ABB88_RS11380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABB88_RS11385 PF00202 Aminotransferase class-III ABB88_RS11390 PF01235 Sodium:alanine symporter family ABB88_RS11395 PF05872 Bacterial protein of unknown function (DUF853) ABB88_RS11400 PF01709 Transcriptional regulator ABB88_RS11405 PF02843 Phosphoribosylglycinamide synthetase, C domain ABB88_RS11405 PF02844 Phosphoribosylglycinamide synthetase, N domain ABB88_RS11405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABB88_RS11410 PF01218 Coproporphyrinogen III oxidase ABB88_RS11415 PF01467 Cytidylyltransferase-like ABB88_RS11425 PF02590 Predicted SPOUT methyltransferase ABB88_RS11430 PF02545 Maf-like protein ABB88_RS11435 PF03212 Pertactin ABB88_RS11435 PF03797 Autotransporter beta-domain ABB88_RS11475 PF10150 Ribonuclease E/G family ABB88_RS11475 PF00575 S1 RNA binding domain ABB88_RS11480 PF00800 Prephenate dehydratase ABB88_RS11480 PF01842 ACT domain ABB88_RS11490 PF07690 Major Facilitator Superfamily ABB88_RS11495 PF00664 ABC transporter transmembrane region ABB88_RS11495 PF00005 ABC transporter ABB88_RS11500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABB88_RS11510 PF03692 Putative zinc- or iron-chelating domain ABB88_RS11525 PF00884 Sulfatase ABB88_RS11530 PF00534 Glycosyl transferases group 1 ABB88_RS11530 PF13439 Glycosyltransferase Family 4 ABB88_RS11535 PF00535 Glycosyl transferase family 2 ABB88_RS11540 PF01522 Polysaccharide deacetylase ABB88_RS11545 PF13439 Glycosyltransferase Family 4 ABB88_RS11545 PF00534 Glycosyl transferases group 1 ABB88_RS11550 PF01336 OB-fold nucleic acid binding domain ABB88_RS11550 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABB88_RS11550 PF02811 PHP domain ABB88_RS11550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABB88_RS11550 PF14579 Helix-hairpin-helix motif ABB88_RS11560 PF00271 Helicase conserved C-terminal domain ABB88_RS11560 PF04408 Helicase associated domain (HA2) ABB88_RS11560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABB88_RS11560 PF11898 Domain of unknown function (DUF3418) ABB88_RS11560 PF00270 DEAD/DEAH box helicase ABB88_RS11565 PF00696 Amino acid kinase family ABB88_RS11565 PF00583 Acetyltransferase (GNAT) family ABB88_RS11570 PF04362 Bacterial Fe(2+) trafficking ABB88_RS11575 PF04185 Phosphoesterase family ABB88_RS11575 PF05506 Domain of unknown function (DUF756) ABB88_RS11580 PF01895 PhoU domain ABB88_RS11585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABB88_RS11590 PF18158 Adaptive response protein AidB N-terminal domain ABB88_RS11590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS11590 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS11595 PF02646 RmuC family ABB88_RS11605 PF02245 Methylpurine-DNA glycosylase (MPG) ABB88_RS11615 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS11620 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS11625 PF08402 TOBE domain ABB88_RS11625 PF00005 ABC transporter ABB88_RS11630 PF13416 Bacterial extracellular solute-binding protein ABB88_RS11650 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS11660 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS11660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABB88_RS11680 PF00285 Citrate synthase, C-terminal domain ABB88_RS11685 PF03937 Flavinator of succinate dehydrogenase ABB88_RS11690 PF13085 2Fe-2S iron-sulfur cluster binding domain ABB88_RS11695 PF00890 FAD binding domain ABB88_RS11695 PF02910 Fumarate reductase flavoprotein C-term ABB88_RS11700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABB88_RS11705 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABB88_RS11710 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS11710 PF07702 UTRA domain ABB88_RS11715 PF00056 lactate/malate dehydrogenase, NAD binding domain ABB88_RS11715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABB88_RS11725 PF00285 Citrate synthase, C-terminal domain ABB88_RS11730 PF00330 Aconitase family (aconitate hydratase) ABB88_RS11730 PF00694 Aconitase C-terminal domain ABB88_RS11735 PF04303 PrpF protein ABB88_RS11740 PF03972 MmgE/PrpD family ABB88_RS11745 PF03653 Uncharacterised protein family (UPF0093) ABB88_RS11750 PF02926 THUMP domain ABB88_RS11750 PF01170 Putative RNA methylase family UPF0020 ABB88_RS11770 PF16177 Acetyl-coenzyme A synthetase N-terminus ABB88_RS11770 PF00501 AMP-binding enzyme ABB88_RS11770 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS11780 PF01430 Hsp33 protein ABB88_RS11805 PF00211 Adenylate and Guanylate cyclase catalytic domain ABB88_RS11810 PF04977 Septum formation initiator ABB88_RS11815 PF03952 Enolase, N-terminal domain ABB88_RS11815 PF00113 Enolase, C-terminal TIM barrel domain ABB88_RS11825 PF00793 DAHP synthetase I family ABB88_RS11830 PF00117 Glutamine amidotransferase class-I ABB88_RS11830 PF06418 CTP synthase N-terminus ABB88_RS11840 PF01321 Creatinase/Prolidase N-terminal domain ABB88_RS11840 PF00557 Metallopeptidase family M24 ABB88_RS11850 PF03576 Peptidase family S58 ABB88_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS11855 PF12911 N-terminal TM domain of oligopeptide transport permease C ABB88_RS11860 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS11865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS11870 PF00005 ABC transporter ABB88_RS11870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS11875 PF01112 Asparaginase ABB88_RS11885 PF01144 Coenzyme A transferase ABB88_RS11905 PF16363 GDP-mannose 4,6 dehydratase ABB88_RS11920 PF01212 Beta-eliminating lyase ABB88_RS11925 PF00892 EamA-like transporter family ABB88_RS11930 PF00501 AMP-binding enzyme ABB88_RS11930 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS11930 PF16177 Acetyl-coenzyme A synthetase N-terminus ABB88_RS11940 PF03928 Haem-degrading ABB88_RS11945 PF16177 Acetyl-coenzyme A synthetase N-terminus ABB88_RS11945 PF00501 AMP-binding enzyme ABB88_RS11945 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS11950 PF16177 Acetyl-coenzyme A synthetase N-terminus ABB88_RS11950 PF00501 AMP-binding enzyme ABB88_RS11950 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS11955 PF00877 NlpC/P60 family ABB88_RS11970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS11970 PF03466 LysR substrate binding domain ABB88_RS11975 PF00171 Aldehyde dehydrogenase family ABB88_RS11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS11985 PF03466 LysR substrate binding domain ABB88_RS11995 PF00883 Cytosol aminopeptidase family, catalytic domain ABB88_RS11995 PF02789 Cytosol aminopeptidase family, N-terminal domain ABB88_RS12000 PF04364 DNA polymerase III chi subunit, HolC ABB88_RS12010 PF01027 Inhibitor of apoptosis-promoting Bax1 ABB88_RS12015 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS12025 PF00291 Pyridoxal-phosphate dependent enzyme ABB88_RS12035 PF11967 Recombination protein O N terminal ABB88_RS12035 PF02565 Recombination protein O C terminal ABB88_RS12040 PF07650 KH domain ABB88_RS12040 PF01926 50S ribosome-binding GTPase ABB88_RS12045 PF14622 Ribonuclease-III-like ABB88_RS12045 PF00035 Double-stranded RNA binding motif ABB88_RS12050 PF10502 Signal peptidase, peptidase S26 ABB88_RS12055 PF00679 Elongation factor G C-terminus ABB88_RS12055 PF00009 Elongation factor Tu GTP binding domain ABB88_RS12055 PF03144 Elongation factor Tu domain 2 ABB88_RS12055 PF06421 GTP-binding protein LepA C-terminus ABB88_RS12060 PF13180 PDZ domain ABB88_RS12075 PF08281 Sigma-70, region 4 ABB88_RS12075 PF04542 Sigma-70 region 2 ABB88_RS12085 PF00109 Beta-ketoacyl synthase, N-terminal domain ABB88_RS12085 PF02801 Beta-ketoacyl synthase, C-terminal domain ABB88_RS12090 PF00550 Phosphopantetheine attachment site ABB88_RS12100 PF00698 Acyl transferase domain ABB88_RS12105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABB88_RS12105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABB88_RS12110 PF02504 Fatty acid synthesis protein ABB88_RS12115 PF01783 Ribosomal L32p protein family ABB88_RS12120 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABB88_RS12125 PF02545 Maf-like protein ABB88_RS12135 PF01510 N-acetylmuramoyl-L-alanine amidase ABB88_RS12150 PF03883 Peroxide stress protein YaaA ABB88_RS12165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABB88_RS12170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS12180 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS12185 PF01416 tRNA pseudouridine synthase ABB88_RS12195 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABB88_RS12195 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABB88_RS12200 PF00180 Isocitrate/isopropylmalate dehydrogenase ABB88_RS12205 PF00694 Aconitase C-terminal domain ABB88_RS12210 PF00330 Aconitase family (aconitate hydratase) ABB88_RS12215 PF12849 PBP superfamily domain ABB88_RS12220 PF00005 ABC transporter ABB88_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS12250 PF13247 4Fe-4S dicluster domain ABB88_RS12255 PF01568 Molydopterin dinucleotide binding domain ABB88_RS12255 PF00384 Molybdopterin oxidoreductase ABB88_RS12255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABB88_RS12285 PF10609 NUBPL iron-transfer P-loop NTPase ABB88_RS12290 PF12804 MobA-like NTP transferase domain ABB88_RS12295 PF03453 MoeA N-terminal region (domain I and II) ABB88_RS12295 PF03454 MoeA C-terminal region (domain IV) ABB88_RS12295 PF00994 Probable molybdopterin binding domain ABB88_RS12300 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ABB88_RS12305 PF01435 Peptidase family M48 ABB88_RS12310 PF01264 Chorismate synthase ABB88_RS12315 PF00563 EAL domain ABB88_RS12315 PF00990 Diguanylate cyclase, GGDEF domain ABB88_RS12315 PF08447 PAS fold ABB88_RS12315 PF08448 PAS fold ABB88_RS12330 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS12335 PF00005 ABC transporter ABB88_RS12335 PF08402 TOBE domain ABB88_RS12340 PF03466 LysR substrate binding domain ABB88_RS12340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS12345 PF00300 Histidine phosphatase superfamily (branch 1) ABB88_RS12355 PF02142 MGS-like domain ABB88_RS12355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABB88_RS12355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABB88_RS12360 PF00117 Glutamine amidotransferase class-I ABB88_RS12360 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABB88_RS12365 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABB88_RS12385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABB88_RS12385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABB88_RS12390 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS12395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS12395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS12395 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS12400 PF03658 RnfH family Ubiquitin ABB88_RS12405 PF03364 Polyketide cyclase / dehydrase and lipid transport ABB88_RS12415 PF01668 SmpB protein ABB88_RS12420 PF08448 PAS fold ABB88_RS12420 PF00990 Diguanylate cyclase, GGDEF domain ABB88_RS12425 PF01145 SPFH domain / Band 7 family ABB88_RS12425 PF16200 C-terminal region of band_7 ABB88_RS12440 PF00958 GMP synthase C terminal domain ABB88_RS12440 PF00117 Glutamine amidotransferase class-I ABB88_RS12445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABB88_RS12445 PF02896 PEP-utilising enzyme, TIM barrel domain ABB88_RS12445 PF00391 PEP-utilising enzyme, mobile domain ABB88_RS12450 PF03618 Kinase/pyrophosphorylase ABB88_RS12455 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABB88_RS12455 PF00588 SpoU rRNA Methylase family ABB88_RS12460 PF01351 Ribonuclease HII ABB88_RS12465 PF02684 Lipid-A-disaccharide synthetase ABB88_RS12470 PF00132 Bacterial transferase hexapeptide (six repeats) ABB88_RS12470 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABB88_RS12475 PF07977 FabA-like domain ABB88_RS12480 PF00132 Bacterial transferase hexapeptide (six repeats) ABB88_RS12480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABB88_RS12485 PF03938 Outer membrane protein (OmpH-like) ABB88_RS12490 PF01103 Surface antigen ABB88_RS12490 PF07244 Surface antigen variable number repeat ABB88_RS12495 PF17820 PDZ domain ABB88_RS12495 PF02163 Peptidase family M50 ABB88_RS12500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABB88_RS12500 PF13288 DXP reductoisomerase C-terminal domain ABB88_RS12500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABB88_RS12510 PF01255 Putative undecaprenyl diphosphate synthase ABB88_RS12515 PF01765 Ribosome recycling factor ABB88_RS12520 PF00696 Amino acid kinase family ABB88_RS12525 PF00889 Elongation factor TS ABB88_RS12530 PF00318 Ribosomal protein S2 ABB88_RS12535 PF00557 Metallopeptidase family M24 ABB88_RS12540 PF08335 GlnD PII-uridylyltransferase ABB88_RS12540 PF01909 Nucleotidyltransferase domain ABB88_RS12540 PF01966 HD domain ABB88_RS12555 PF00156 Phosphoribosyl transferase domain ABB88_RS12570 PF02875 Mur ligase family, glutamate ligase domain ABB88_RS12570 PF08245 Mur ligase middle domain ABB88_RS12580 PF07196 Flagellin hook IN motif ABB88_RS12580 PF07195 Flagellar hook-associated protein 2 C-terminus ABB88_RS12580 PF02465 Flagellar hook-associated protein 2 N-terminus ABB88_RS12585 PF02561 Flagellar protein FliS ABB88_RS12605 PF01312 FlhB HrpN YscU SpaS Family ABB88_RS12615 PF02049 Flagellar hook-basal body complex protein FliE ABB88_RS12620 PF01514 Secretory protein of YscJ/FliF family ABB88_RS12620 PF08345 Flagellar M-ring protein C-terminal ABB88_RS12625 PF14841 FliG middle domain ABB88_RS12625 PF01706 FliG C-terminal domain ABB88_RS12625 PF14842 FliG N-terminal domain ABB88_RS12635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABB88_RS12635 PF18269 T3SS EscN ATPase C-terminal domain ABB88_RS12660 PF03748 Flagellar basal body-associated protein FliL ABB88_RS12665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABB88_RS12665 PF02154 Flagellar motor switch protein FliM ABB88_RS12670 PF16973 Flagellar motor switch protein FliN N-terminal ABB88_RS12670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABB88_RS12675 PF04347 Flagellar biosynthesis protein, FliO ABB88_RS12680 PF00813 FliP family ABB88_RS12685 PF01313 Bacterial export proteins, family 3 ABB88_RS12690 PF01311 Bacterial export proteins, family 1 ABB88_RS12700 PF08447 PAS fold ABB88_RS12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABB88_RS12705 PF02203 Tar ligand binding domain homologue ABB88_RS12705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABB88_RS12705 PF00672 HAMP domain ABB88_RS12710 PF02203 Tar ligand binding domain homologue ABB88_RS12710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABB88_RS12710 PF00672 HAMP domain ABB88_RS12715 PF00669 Bacterial flagellin N-terminal helical region ABB88_RS12720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABB88_RS12720 PF00460 Flagella basal body rod protein ABB88_RS12725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABB88_RS12725 PF10135 Rod binding protein ABB88_RS12730 PF02119 Flagellar P-ring protein ABB88_RS12735 PF02107 Flagellar L-ring protein ABB88_RS12740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABB88_RS12740 PF00460 Flagella basal body rod protein ABB88_RS12745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABB88_RS12745 PF00460 Flagella basal body rod protein ABB88_RS12750 PF00460 Flagella basal body rod protein ABB88_RS12750 PF07559 Flagellar basal body protein FlaE ABB88_RS12750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABB88_RS12755 PF13861 FlgD Tudor-like domain ABB88_RS12755 PF13860 FlgD Ig-like domain ABB88_RS12755 PF03963 Flagellar hook capping protein - N-terminal region ABB88_RS12760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABB88_RS12760 PF00460 Flagella basal body rod protein ABB88_RS12765 PF00460 Flagella basal body rod protein ABB88_RS12775 PF04316 Anti-sigma-28 factor, FlgM ABB88_RS12785 PF00448 SRP54-type protein, GTPase domain ABB88_RS12795 PF01312 FlhB HrpN YscU SpaS Family ABB88_RS12805 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS12810 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS12815 PF00005 ABC transporter ABB88_RS12825 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABB88_RS12825 PF02558 Ketopantoate reductase PanE/ApbA ABB88_RS12830 PF13378 Enolase C-terminal domain-like ABB88_RS12835 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS12845 PF00694 Aconitase C-terminal domain ABB88_RS12850 PF00356 Bacterial regulatory proteins, lacI family ABB88_RS12855 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS12860 PF02515 CoA-transferase family III ABB88_RS12870 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS12875 PF13607 Succinyl-CoA ligase like flavodoxin domain ABB88_RS12875 PF13380 CoA binding domain ABB88_RS12880 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS12880 PF07729 FCD domain ABB88_RS12885 PF03328 HpcH/HpaI aldolase/citrate lyase family ABB88_RS12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS12895 PF03466 LysR substrate binding domain ABB88_RS12905 PF12951 Passenger-associated-transport-repeat ABB88_RS12915 PF03551 Transcriptional regulator PadR-like family ABB88_RS12925 PF03372 Endonuclease/Exonuclease/phosphatase family ABB88_RS12930 PF13091 PLD-like domain ABB88_RS12945 PF03706 Lysylphosphatidylglycerol synthase TM region ABB88_RS12975 PF11896 Domain of unknown function (DUF3416) ABB88_RS12975 PF00128 Alpha amylase, catalytic domain ABB88_RS12980 PF00128 Alpha amylase, catalytic domain ABB88_RS12980 PF16657 Maltogenic Amylase, C-terminal domain ABB88_RS12985 PF00128 Alpha amylase, catalytic domain ABB88_RS12985 PF02806 Alpha amylase, C-terminal all-beta domain ABB88_RS12985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABB88_RS12990 PF00128 Alpha amylase, catalytic domain ABB88_RS12990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABB88_RS12995 PF11941 Domain of unknown function (DUF3459) ABB88_RS12995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ABB88_RS12995 PF00128 Alpha amylase, catalytic domain ABB88_RS13005 PF00128 Alpha amylase, catalytic domain ABB88_RS13015 PF08543 Phosphomethylpyrimidine kinase ABB88_RS13020 PF01168 Alanine racemase, N-terminal domain ABB88_RS13025 PF00155 Aminotransferase class I and II ABB88_RS13025 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS13040 PF00582 Universal stress protein family ABB88_RS13045 PF00248 Aldo/keto reductase family ABB88_RS13055 PF16485 Protealysin propeptide ABB88_RS13055 PF02868 Thermolysin metallopeptidase, alpha-helical domain ABB88_RS13055 PF01447 Thermolysin metallopeptidase, catalytic domain ABB88_RS13060 PF07681 DoxX ABB88_RS13080 PF00578 AhpC/TSA family ABB88_RS13085 PF03960 ArsC family ABB88_RS13090 PF02515 CoA-transferase family III ABB88_RS13110 PF00255 Glutathione peroxidase ABB88_RS13115 PF02798 Glutathione S-transferase, N-terminal domain ABB88_RS13115 PF00043 Glutathione S-transferase, C-terminal domain ABB88_RS13140 PF02666 Phosphatidylserine decarboxylase ABB88_RS13145 PF01070 FMN-dependent dehydrogenase ABB88_RS13150 PF03180 NLPA lipoprotein ABB88_RS13155 PF08808 RES domain ABB88_RS13165 PF04241 Protein of unknown function (DUF423) ABB88_RS13185 PF13458 Periplasmic binding protein ABB88_RS13190 PF00005 ABC transporter ABB88_RS13190 PF17912 MalK OB fold domain ABB88_RS13195 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS13200 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS13205 PF13416 Bacterial extracellular solute-binding protein ABB88_RS13210 PF03807 NADP oxidoreductase coenzyme F420-dependent ABB88_RS13210 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABB88_RS13215 PF02592 Putative vitamin uptake transporter ABB88_RS13225 PF13458 Periplasmic binding protein ABB88_RS13230 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS13235 PF11862 Domain of unknown function (DUF3382) ABB88_RS13235 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS13240 PF00005 ABC transporter ABB88_RS13240 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS13245 PF00005 ABC transporter ABB88_RS13250 PF01177 Asp/Glu/Hydantoin racemase ABB88_RS13265 PF00892 EamA-like transporter family ABB88_RS13275 PF04235 Protein of unknown function (DUF418) ABB88_RS13280 PF00521 DNA gyrase/topoisomerase IV, subunit A ABB88_RS13290 PF00986 DNA gyrase B subunit, carboxyl terminus ABB88_RS13290 PF01751 Toprim domain ABB88_RS13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS13290 PF00204 DNA gyrase B ABB88_RS13295 PF00085 Thioredoxin ABB88_RS13300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABB88_RS13300 PF07497 Rho termination factor, RNA-binding domain ABB88_RS13300 PF07498 Rho termination factor, N-terminal domain ABB88_RS13310 PF08335 GlnD PII-uridylyltransferase ABB88_RS13310 PF03710 Glutamate-ammonia ligase adenylyltransferase ABB88_RS13315 PF02677 Epoxyqueuosine reductase QueH ABB88_RS13320 PF03313 Serine dehydratase alpha chain ABB88_RS13320 PF03315 Serine dehydratase beta chain ABB88_RS13325 PF02690 Na+/Pi-cotransporter ABB88_RS13330 PF01738 Dienelactone hydrolase family ABB88_RS13340 PF00476 DNA polymerase family A ABB88_RS13340 PF01612 3'-5' exonuclease ABB88_RS13340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABB88_RS13340 PF01367 5'-3' exonuclease, C-terminal SAM fold ABB88_RS13345 PF03641 Possible lysine decarboxylase ABB88_RS13360 PF00009 Elongation factor Tu GTP binding domain ABB88_RS13360 PF03144 Elongation factor Tu domain 2 ABB88_RS13360 PF00679 Elongation factor G C-terminus ABB88_RS13365 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABB88_RS13365 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABB88_RS13370 PF02033 Ribosome-binding factor A ABB88_RS13375 PF11987 Translation-initiation factor 2 ABB88_RS13375 PF08364 Bacterial translation initiation factor IF-2 associated region ABB88_RS13375 PF04760 Translation initiation factor IF-2, N-terminal region ABB88_RS13375 PF00009 Elongation factor Tu GTP binding domain ABB88_RS13380 PF13184 NusA-like KH domain ABB88_RS13380 PF08529 NusA N-terminal domain ABB88_RS13385 PF17384 RimP C-terminal SH3 domain ABB88_RS13385 PF02576 RimP N-terminal domain ABB88_RS13390 PF00849 RNA pseudouridylate synthase ABB88_RS13390 PF01479 S4 domain ABB88_RS13395 PF04079 Segregation and condensation complex subunit ScpB ABB88_RS13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS13405 PF03466 LysR substrate binding domain ABB88_RS13410 PF00881 Nitroreductase family ABB88_RS13415 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABB88_RS13415 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABB88_RS13435 PF14497 Glutathione S-transferase, C-terminal domain ABB88_RS13435 PF02798 Glutathione S-transferase, N-terminal domain ABB88_RS13440 PF02401 LytB protein ABB88_RS13445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABB88_RS13450 PF04002 RadC-like JAB domain ABB88_RS13455 PF04199 Putative cyclase ABB88_RS13460 PF03301 Tryptophan 2,3-dioxygenase ABB88_RS13465 PF01197 Ribosomal protein L31 ABB88_RS13475 PF01554 MatE ABB88_RS13490 PF18073 Rubredoxin metal binding domain ABB88_RS13495 PF12450 von Willebrand factor ABB88_RS13495 PF12034 Domain of unknown function (DUF3520) ABB88_RS13495 PF00092 von Willebrand factor type A domain ABB88_RS13500 PF04545 Sigma-70, region 4 ABB88_RS13500 PF04542 Sigma-70 region 2 ABB88_RS13520 PF00842 Alanine racemase, C-terminal domain ABB88_RS13520 PF01168 Alanine racemase, N-terminal domain ABB88_RS13535 PF01593 Flavin containing amine oxidoreductase ABB88_RS13535 PF01593 Flavin containing amine oxidoreductase ABB88_RS13540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABB88_RS13550 PF01061 ABC-2 type transporter ABB88_RS13555 PF00005 ABC transporter ABB88_RS13575 PF02424 ApbE family ABB88_RS13580 PF00175 Oxidoreductase NAD-binding domain ABB88_RS13580 PF00667 FAD binding domain ABB88_RS13580 PF00258 Flavodoxin ABB88_RS13590 PF07969 Amidohydrolase family ABB88_RS13595 PF03466 LysR substrate binding domain ABB88_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS13605 PF09370 Phosphoenolpyruvate hydrolase-like ABB88_RS13620 PF03212 Pertactin ABB88_RS13620 PF03797 Autotransporter beta-domain ABB88_RS13625 PF03797 Autotransporter beta-domain ABB88_RS13625 PF03212 Pertactin ABB88_RS13640 PF17871 AAA lid domain ABB88_RS13640 PF07724 AAA domain (Cdc48 subfamily) ABB88_RS13640 PF10431 C-terminal, D2-small domain, of ClpB protein ABB88_RS13640 PF00004 ATPase family associated with various cellular activities (AAA) ABB88_RS13640 PF02861 Clp amino terminal domain, pathogenicity island component ABB88_RS13645 PF00027 Cyclic nucleotide-binding domain ABB88_RS13645 PF13545 Crp-like helix-turn-helix domain ABB88_RS13660 PF00293 NUDIX domain ABB88_RS13665 PF12843 Putative quorum-sensing-regulated virulence factor ABB88_RS13675 PF08281 Sigma-70, region 4 ABB88_RS13675 PF04542 Sigma-70 region 2 ABB88_RS13675 PF12680 SnoaL-like domain ABB88_RS13680 PF02627 Carboxymuconolactone decarboxylase family ABB88_RS13710 PF00155 Aminotransferase class I and II ABB88_RS13715 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS13725 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS13730 PF00005 ABC transporter ABB88_RS13750 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABB88_RS13775 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS13780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABB88_RS13780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABB88_RS13785 PF03466 LysR substrate binding domain ABB88_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS13795 PF02016 LD-carboxypeptidase N-terminal domain ABB88_RS13795 PF17676 LD-carboxypeptidase C-terminal domain ABB88_RS13810 PF07690 Major Facilitator Superfamily ABB88_RS13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS13820 PF03466 LysR substrate binding domain ABB88_RS13825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABB88_RS13825 PF13378 Enolase C-terminal domain-like ABB88_RS13830 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS13850 PF02567 Phenazine biosynthesis-like protein ABB88_RS13860 PF03239 Iron permease FTR1 family ABB88_RS13870 PF10634 Fe2+ transport protein ABB88_RS13875 PF07879 PHB/PHA accumulation regulator DNA-binding domain ABB88_RS13875 PF05233 PHB accumulation regulatory domain ABB88_RS13880 PF00106 short chain dehydrogenase ABB88_RS13885 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ABB88_RS13890 PF02578 Multi-copper polyphenol oxidoreductase laccase ABB88_RS13895 PF00849 RNA pseudouridylate synthase ABB88_RS13895 PF01479 S4 domain ABB88_RS13900 PF13525 Outer membrane lipoprotein ABB88_RS13905 PF04851 Type III restriction enzyme, res subunit ABB88_RS13905 PF13307 Helicase C-terminal domain ABB88_RS13910 PF17674 HHH domain ABB88_RS13910 PF09371 Tex-like protein N-terminal domain ABB88_RS13910 PF16921 Tex protein YqgF-like domain ABB88_RS13910 PF00575 S1 RNA binding domain ABB88_RS13915 PF00579 tRNA synthetases class I (W and Y) ABB88_RS13940 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS13950 PF03466 LysR substrate binding domain ABB88_RS13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS13960 PF03969 AFG1-like ATPase ABB88_RS13965 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS13965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABB88_RS13970 PF00364 Biotin-requiring enzyme ABB88_RS13970 PF02817 e3 binding domain ABB88_RS13970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABB88_RS13975 PF16078 2-oxoglutarate dehydrogenase N-terminus ABB88_RS13975 PF02779 Transketolase, pyrimidine binding domain ABB88_RS13975 PF16870 2-oxoglutarate dehydrogenase C-terminal ABB88_RS13975 PF00676 Dehydrogenase E1 component ABB88_RS13985 PF01037 Lrp/AsnC ligand binding domain ABB88_RS13990 PF17831 Pyruvate dehydrogenase E1 component middle domain ABB88_RS13990 PF00456 Transketolase, thiamine diphosphate binding domain ABB88_RS13995 PF00390 Malic enzyme, N-terminal domain ABB88_RS13995 PF01515 Phosphate acetyl/butaryl transferase ABB88_RS13995 PF03949 Malic enzyme, NAD binding domain ABB88_RS14000 PF16970 Type-1 fimbrial protein, A ABB88_RS14010 PF01272 Transcription elongation factor, GreA/GreB, C-term ABB88_RS14010 PF03449 Transcription elongation factor, N-terminal ABB88_RS14015 PF02811 PHP domain ABB88_RS14025 PF03772 Competence protein ABB88_RS14025 PF13567 Domain of unknown function (DUF4131) ABB88_RS14025 PF00753 Metallo-beta-lactamase superfamily ABB88_RS14055 PF01026 TatD related DNase ABB88_RS14060 PF00005 ABC transporter ABB88_RS14065 PF02687 FtsX-like permease family ABB88_RS14065 PF12704 MacB-like periplasmic core domain ABB88_RS14075 PF17768 RecJ OB domain ABB88_RS14075 PF01368 DHH family ABB88_RS14075 PF02272 DHHA1 domain ABB88_RS14085 PF00106 short chain dehydrogenase ABB88_RS14090 PF00152 tRNA synthetases class II (D, K and N) ABB88_RS14090 PF01336 OB-fold nucleic acid binding domain ABB88_RS14100 PF00440 Bacterial regulatory proteins, tetR family ABB88_RS14100 PF17932 Tetracyclin repressor-like, C-terminal domain ABB88_RS14105 PF00501 AMP-binding enzyme ABB88_RS14110 PF00005 ABC transporter ABB88_RS14120 PF11862 Domain of unknown function (DUF3382) ABB88_RS14120 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS14130 PF00005 ABC transporter ABB88_RS14130 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS14140 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS14140 PF07689 KaiB domain ABB88_RS14145 PF00072 Response regulator receiver domain ABB88_RS14145 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS14150 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABB88_RS14160 PF03631 Virulence factor BrkB ABB88_RS14175 PF01207 Dihydrouridine synthase (Dus) ABB88_RS14180 PF01636 Phosphotransferase enzyme family ABB88_RS14205 PF01985 CRS1 / YhbY (CRM) domain ABB88_RS14210 PF01728 FtsJ-like methyltransferase ABB88_RS14215 PF00004 ATPase family associated with various cellular activities (AAA) ABB88_RS14215 PF17862 AAA+ lid domain ABB88_RS14215 PF06480 FtsH Extracellular ABB88_RS14215 PF01434 Peptidase family M41 ABB88_RS14220 PF00809 Pterin binding enzyme ABB88_RS14225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABB88_RS14225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABB88_RS14225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABB88_RS14225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABB88_RS14235 PF02541 Ppx/GppA phosphatase family ABB88_RS14240 PF02503 Polyphosphate kinase middle domain ABB88_RS14240 PF13089 Polyphosphate kinase N-terminal domain ABB88_RS14240 PF13090 Polyphosphate kinase C-terminal domain 2 ABB88_RS14240 PF17941 Polyphosphate kinase C-terminal domain 1 ABB88_RS14245 PF12849 PBP superfamily domain ABB88_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS14255 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS14260 PF00005 ABC transporter ABB88_RS14275 PF01337 Barstar (barnase inhibitor) ABB88_RS14285 PF01515 Phosphate acetyl/butaryl transferase ABB88_RS14285 PF00390 Malic enzyme, N-terminal domain ABB88_RS14285 PF03949 Malic enzyme, NAD binding domain ABB88_RS14295 PF00155 Aminotransferase class I and II ABB88_RS14300 PF01464 Transglycosylase SLT domain ABB88_RS14300 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ABB88_RS14305 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ABB88_RS14330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABB88_RS14330 PF14824 Sirohaem biosynthesis protein central ABB88_RS14330 PF10414 Sirohaem synthase dimerisation region ABB88_RS14335 PF03797 Autotransporter beta-domain ABB88_RS14335 PF03212 Pertactin ABB88_RS14350 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ABB88_RS14355 PF02547 Queuosine biosynthesis protein ABB88_RS14360 PF01702 Queuine tRNA-ribosyltransferase ABB88_RS14365 PF02699 Preprotein translocase subunit ABB88_RS14370 PF13721 SecD export protein N-terminal TM region ABB88_RS14370 PF02355 Protein export membrane protein ABB88_RS14370 PF07549 SecD/SecF GG Motif ABB88_RS14375 PF07549 SecD/SecF GG Motif ABB88_RS14375 PF02355 Protein export membrane protein ABB88_RS14390 PF01938 TRAM domain ABB88_RS14390 PF00919 Uncharacterized protein family UPF0004 ABB88_RS14390 PF04055 Radical SAM superfamily ABB88_RS14395 PF02562 PhoH-like protein ABB88_RS14400 PF02130 Uncharacterized protein family UPF0054 ABB88_RS14405 PF00571 CBS domain ABB88_RS14405 PF03471 Transporter associated domain ABB88_RS14410 PF00795 Carbon-nitrogen hydrolase ABB88_RS14415 PF00248 Aldo/keto reductase family ABB88_RS14440 PF04344 Chemotaxis phosphatase, CheZ ABB88_RS14445 PF00072 Response regulator receiver domain ABB88_RS14450 PF01339 CheB methylesterase ABB88_RS14450 PF00072 Response regulator receiver domain ABB88_RS14460 PF02203 Tar ligand binding domain homologue ABB88_RS14460 PF00672 HAMP domain ABB88_RS14460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABB88_RS14465 PF01584 CheW-like domain ABB88_RS14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS14470 PF02895 Signal transducing histidine kinase, homodimeric domain ABB88_RS14470 PF09078 CheY binding ABB88_RS14470 PF01584 CheW-like domain ABB88_RS14470 PF01627 Hpt domain ABB88_RS14475 PF00072 Response regulator receiver domain ABB88_RS14480 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABB88_RS14480 PF00691 OmpA family ABB88_RS14485 PF01618 MotA/TolQ/ExbB proton channel family ABB88_RS14490 PF05280 Flagellar transcriptional activator (FlhC) ABB88_RS14495 PF05247 Flagellar transcriptional activator (FlhD) ABB88_RS14500 PF04539 Sigma-70 region 3 ABB88_RS14500 PF04545 Sigma-70, region 4 ABB88_RS14500 PF04542 Sigma-70 region 2 ABB88_RS14510 PF01176 Translation initiation factor 1A / IF-1 ABB88_RS14520 PF01476 LysM domain ABB88_RS14520 PF08525 Opacity-associated protein A N-terminal motif ABB88_RS14520 PF01551 Peptidase family M23 ABB88_RS14530 PF00994 Probable molybdopterin binding domain ABB88_RS14540 PF03591 AzlC protein ABB88_RS14550 PF00226 DnaJ domain ABB88_RS14550 PF01556 DnaJ C terminal domain ABB88_RS14575 PF02798 Glutathione S-transferase, N-terminal domain ABB88_RS14575 PF14834 Glutathione S-transferase, C-terminal domain ABB88_RS14580 PF11339 Protein of unknown function (DUF3141) ABB88_RS14585 PF01515 Phosphate acetyl/butaryl transferase ABB88_RS14590 PF00871 Acetokinase family ABB88_RS14600 PF00162 Phosphoglycerate kinase ABB88_RS14605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABB88_RS14605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABB88_RS14610 PF00456 Transketolase, thiamine diphosphate binding domain ABB88_RS14610 PF02780 Transketolase, C-terminal domain ABB88_RS14610 PF02779 Transketolase, pyrimidine binding domain ABB88_RS14615 PF04452 RNA methyltransferase ABB88_RS14625 PF00700 Bacterial flagellin C-terminal helical region ABB88_RS14625 PF00669 Bacterial flagellin N-terminal helical region ABB88_RS14630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABB88_RS14630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS14635 PF00364 Biotin-requiring enzyme ABB88_RS14635 PF02817 e3 binding domain ABB88_RS14635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABB88_RS14640 PF17831 Pyruvate dehydrogenase E1 component middle domain ABB88_RS14640 PF00456 Transketolase, thiamine diphosphate binding domain ABB88_RS14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS14645 PF00989 PAS fold ABB88_RS14645 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS14650 PF00072 Response regulator receiver domain ABB88_RS14650 PF00196 Bacterial regulatory proteins, luxR family ABB88_RS14655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABB88_RS14655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABB88_RS14660 PF01432 Peptidase family M3 ABB88_RS14665 PF02630 SCO1/SenC ABB88_RS14675 PF02321 Outer membrane efflux protein ABB88_RS14680 PF00873 AcrB/AcrD/AcrF family ABB88_RS14685 PF00529 HlyD membrane-fusion protein of T1SS ABB88_RS14685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABB88_RS14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS14690 PF03466 LysR substrate binding domain ABB88_RS14695 PF01479 S4 domain ABB88_RS14695 PF00849 RNA pseudouridylate synthase ABB88_RS14700 PF04345 Chorismate lyase ABB88_RS14705 PF07690 Major Facilitator Superfamily ABB88_RS14715 PF00248 Aldo/keto reductase family ABB88_RS14725 PF00293 NUDIX domain ABB88_RS14730 PF01245 Ribosomal protein L19 ABB88_RS14745 PF04055 Radical SAM superfamily ABB88_RS14755 PF01507 Phosphoadenosine phosphosulfate reductase family ABB88_RS14760 PF00005 ABC transporter ABB88_RS14760 PF12857 TOBE-like domain ABB88_RS14760 PF17850 CysA C-terminal regulatory domain ABB88_RS14765 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS14770 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS14785 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABB88_RS14785 PF00578 AhpC/TSA family ABB88_RS14790 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS14790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS14790 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABB88_RS14790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS14795 PF00766 Electron transfer flavoprotein FAD-binding domain ABB88_RS14795 PF01012 Electron transfer flavoprotein domain ABB88_RS14800 PF01012 Electron transfer flavoprotein domain ABB88_RS14805 PF00850 Histone deacetylase domain ABB88_RS14810 PF13406 Transglycosylase SLT domain ABB88_RS14815 PF00291 Pyridoxal-phosphate dependent enzyme ABB88_RS14825 PF10531 SLBB domain ABB88_RS14830 PF01370 NAD dependent epimerase/dehydratase family ABB88_RS14835 PF00294 pfkB family carbohydrate kinase ABB88_RS14840 PF18073 Rubredoxin metal binding domain ABB88_RS14850 PF00216 Bacterial DNA-binding protein ABB88_RS14855 PF00575 S1 RNA binding domain ABB88_RS14860 PF02224 Cytidylate kinase ABB88_RS14865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABB88_RS14870 PF02153 Prephenate dehydrogenase ABB88_RS14875 PF00800 Prephenate dehydratase ABB88_RS14875 PF01842 ACT domain ABB88_RS14875 PF01817 Chorismate mutase type II ABB88_RS14880 PF00266 Aminotransferase class-V ABB88_RS14885 PF03989 DNA gyrase C-terminal domain, beta-propeller ABB88_RS14885 PF00521 DNA gyrase/topoisomerase IV, subunit A ABB88_RS14890 PF00691 OmpA family ABB88_RS14900 PF13419 Haloacid dehalogenase-like hydrolase ABB88_RS14905 PF07690 Major Facilitator Superfamily ABB88_RS14930 PF03466 LysR substrate binding domain ABB88_RS14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS14935 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS14945 PF11799 impB/mucB/samB family C-terminal domain ABB88_RS14945 PF00817 impB/mucB/samB family ABB88_RS14945 PF11798 IMS family HHH motif ABB88_RS14960 PF00326 Prolyl oligopeptidase family ABB88_RS14965 PF17092 Penicillin-binding protein OB-like domain ABB88_RS14965 PF00905 Penicillin binding protein transpeptidase domain ABB88_RS14965 PF00912 Transglycosylase ABB88_RS14970 PF00149 Calcineurin-like phosphoesterase ABB88_RS14985 PF00248 Aldo/keto reductase family ABB88_RS14990 PF00248 Aldo/keto reductase family ABB88_RS14995 PF00664 ABC transporter transmembrane region ABB88_RS14995 PF00005 ABC transporter ABB88_RS15040 PF01039 Carboxyl transferase domain ABB88_RS15045 PF02785 Biotin carboxylase C-terminal domain ABB88_RS15045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABB88_RS15045 PF00289 Biotin carboxylase, N-terminal domain ABB88_RS15050 PF07702 UTRA domain ABB88_RS15050 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS15070 PF02436 Conserved carboxylase domain ABB88_RS15070 PF00364 Biotin-requiring enzyme ABB88_RS15070 PF00682 HMGL-like ABB88_RS15075 PF00364 Biotin-requiring enzyme ABB88_RS15085 PF01966 HD domain ABB88_RS15105 PF07238 PilZ domain ABB88_RS15105 PF07317 Flagellar regulator YcgR ABB88_RS15125 PF05724 Thiopurine S-methyltransferase (TPMT) ABB88_RS15130 PF00005 ABC transporter ABB88_RS15130 PF00664 ABC transporter transmembrane region ABB88_RS15145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS15145 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS15145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS15150 PF10369 Small subunit of acetolactate synthase ABB88_RS15155 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABB88_RS15155 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABB88_RS15160 PF01066 CDP-alcohol phosphatidyltransferase ABB88_RS15175 PF00312 Ribosomal protein S15 ABB88_RS15180 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABB88_RS15180 PF03725 3' exoribonuclease family, domain 2 ABB88_RS15180 PF01138 3' exoribonuclease family, domain 1 ABB88_RS15180 PF00575 S1 RNA binding domain ABB88_RS15180 PF00013 KH domain ABB88_RS15195 PF13291 ACT domain ABB88_RS15195 PF00291 Pyridoxal-phosphate dependent enzyme ABB88_RS15210 PF16197 Ketoacyl-synthetase C-terminal extension ABB88_RS15210 PF00109 Beta-ketoacyl synthase, N-terminal domain ABB88_RS15210 PF02801 Beta-ketoacyl synthase, C-terminal domain ABB88_RS15210 PF08659 KR domain ABB88_RS15210 PF00550 Phosphopantetheine attachment site ABB88_RS15210 PF00698 Acyl transferase domain ABB88_RS15210 PF08990 Erythronolide synthase docking ABB88_RS15210 PF14765 Polyketide synthase dehydratase ABB88_RS15210 PF08240 Alcohol dehydrogenase GroES-like domain ABB88_RS15215 PF00121 Triosephosphate isomerase ABB88_RS15220 PF03840 Preprotein translocase SecG subunit ABB88_RS15230 PF02028 BCCT, betaine/carnitine/choline family transporter ABB88_RS15240 PF07476 Methylaspartate ammonia-lyase C-terminus ABB88_RS15240 PF05034 Methylaspartate ammonia-lyase N-terminus ABB88_RS15245 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS15260 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS15275 PF03466 LysR substrate binding domain ABB88_RS15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS15280 PF01053 Cys/Met metabolism PLP-dependent enzyme ABB88_RS15285 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABB88_RS15300 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS15305 PF01266 FAD dependent oxidoreductase ABB88_RS15315 PF05378 Hydantoinase/oxoprolinase N-terminal region ABB88_RS15315 PF01968 Hydantoinase/oxoprolinase ABB88_RS15325 PF00127 Copper binding proteins, plastocyanin/azurin family ABB88_RS15335 PF02321 Outer membrane efflux protein ABB88_RS15340 PF00873 AcrB/AcrD/AcrF family ABB88_RS15345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABB88_RS15350 PF01638 HxlR-like helix-turn-helix ABB88_RS15360 PF02028 BCCT, betaine/carnitine/choline family transporter ABB88_RS15365 PF03466 LysR substrate binding domain ABB88_RS15365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS15370 PF00781 Diacylglycerol kinase catalytic domain ABB88_RS15380 PF01569 PAP2 superfamily ABB88_RS15410 PF13609 Gram-negative porin ABB88_RS15415 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABB88_RS15420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABB88_RS15425 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABB88_RS15430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABB88_RS15440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABB88_RS15440 PF10531 SLBB domain ABB88_RS15440 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABB88_RS15445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABB88_RS15445 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ABB88_RS15445 PF00384 Molybdopterin oxidoreductase ABB88_RS15450 PF00146 NADH dehydrogenase ABB88_RS15455 PF12838 4Fe-4S dicluster domain ABB88_RS15460 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABB88_RS15465 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABB88_RS15470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABB88_RS15470 PF00361 Proton-conducting membrane transporter ABB88_RS15475 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ABB88_RS15475 PF00361 Proton-conducting membrane transporter ABB88_RS15480 PF00361 Proton-conducting membrane transporter ABB88_RS15490 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS15490 PF00593 TonB dependent receptor ABB88_RS15495 PF00593 TonB dependent receptor ABB88_RS15495 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS15510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS15510 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS15510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS15515 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS15520 PF03466 LysR substrate binding domain ABB88_RS15530 PF03461 TRCF domain ABB88_RS15530 PF02559 CarD-like/TRCF domain ABB88_RS15530 PF00270 DEAD/DEAH box helicase ABB88_RS15530 PF00271 Helicase conserved C-terminal domain ABB88_RS15530 PF17757 UvrB interaction domain ABB88_RS15535 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABB88_RS15540 PF02542 YgbB family ABB88_RS15550 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABB88_RS15555 PF01433 Peptidase family M1 domain ABB88_RS15555 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABB88_RS15555 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABB88_RS15575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS15575 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS15575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS15585 PF09084 NMT1/THI5 like ABB88_RS15590 PF00005 ABC transporter ABB88_RS15595 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS15605 PF00501 AMP-binding enzyme ABB88_RS15605 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS15610 PF08240 Alcohol dehydrogenase GroES-like domain ABB88_RS15610 PF00107 Zinc-binding dehydrogenase ABB88_RS15615 PF07729 FCD domain ABB88_RS15615 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS15625 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS15625 PF07729 FCD domain ABB88_RS15630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS15630 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS15630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS15650 PF01063 Amino-transferase class IV ABB88_RS15655 PF00005 ABC transporter ABB88_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS15670 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS15675 PF03466 LysR substrate binding domain ABB88_RS15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS15680 PF02321 Outer membrane efflux protein ABB88_RS15685 PF13533 Biotin-lipoyl like ABB88_RS15690 PF00664 ABC transporter transmembrane region ABB88_RS15690 PF03412 Peptidase C39 family ABB88_RS15690 PF00005 ABC transporter ABB88_RS15695 PF03497 Anthrax toxin LF subunit ABB88_RS15695 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ABB88_RS15695 PF02382 N-terminal domain in RTX protein ABB88_RS15705 PF02794 RTX toxin acyltransferase family ABB88_RS15710 PF00171 Aldehyde dehydrogenase family ABB88_RS15715 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS15720 PF01266 FAD dependent oxidoreductase ABB88_RS15725 PF02538 Hydantoinase B/oxoprolinase ABB88_RS15730 PF01968 Hydantoinase/oxoprolinase ABB88_RS15730 PF05378 Hydantoinase/oxoprolinase N-terminal region ABB88_RS15735 PF03466 LysR substrate binding domain ABB88_RS15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS15745 PF00348 Polyprenyl synthetase ABB88_RS15755 PF00829 Ribosomal prokaryotic L21 protein ABB88_RS15760 PF01016 Ribosomal L27 protein ABB88_RS15765 PF01018 GTP1/OBG ABB88_RS15765 PF01926 50S ribosome-binding GTPase ABB88_RS15770 PF01472 PUA domain ABB88_RS15770 PF00696 Amino acid kinase family ABB88_RS15815 PF04773 FecR protein ABB88_RS15815 PF16220 Domain of unknown function (DUF4880) ABB88_RS15820 PF00593 TonB dependent receptor ABB88_RS15820 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS15825 PF04264 YceI-like domain ABB88_RS15835 PF03435 Saccharopine dehydrogenase NADP binding domain ABB88_RS15835 PF16653 Saccharopine dehydrogenase C-terminal domain ABB88_RS15840 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABB88_RS15860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS15865 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS15875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS15875 PF00005 ABC transporter ABB88_RS15880 PF01425 Amidase ABB88_RS15885 PF00202 Aminotransferase class-III ABB88_RS15905 PF04972 BON domain ABB88_RS15905 PF00691 OmpA family ABB88_RS15910 PF01329 Pterin 4 alpha carbinolamine dehydratase ABB88_RS15920 PF00483 Nucleotidyl transferase ABB88_RS15925 PF01636 Phosphotransferase enzyme family ABB88_RS15930 PF04453 LPS transport system D ABB88_RS15935 PF09312 SurA N-terminal domain ABB88_RS15935 PF00639 PPIC-type PPIASE domain ABB88_RS15940 PF00398 Ribosomal RNA adenine dimethylase ABB88_RS15945 PF02595 Glycerate kinase family ABB88_RS15950 PF02887 Pyruvate kinase, alpha/beta domain ABB88_RS15950 PF00224 Pyruvate kinase, barrel domain ABB88_RS15955 PF07670 Nucleoside recognition ABB88_RS15960 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS15960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS15960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS15960 PF09317 Domain of unknown function (DUF1974) ABB88_RS15980 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS15985 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS15990 PF00005 ABC transporter ABB88_RS15995 PF01032 FecCD transport family ABB88_RS16005 PF00691 OmpA family ABB88_RS16010 PF04052 TolB amino-terminal domain ABB88_RS16010 PF07676 WD40-like Beta Propeller Repeat ABB88_RS16020 PF02472 Biopolymer transport protein ExbD/TolR ABB88_RS16025 PF01618 MotA/TolQ/ExbB proton channel family ABB88_RS16030 PF03061 Thioesterase superfamily ABB88_RS16035 PF03129 Anticodon binding domain ABB88_RS16035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABB88_RS16035 PF04073 Aminoacyl-tRNA editing domain ABB88_RS16040 PF00293 NUDIX domain ABB88_RS16045 PF00072 Response regulator receiver domain ABB88_RS16045 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS16055 PF02586 SOS response associated peptidase (SRAP) ABB88_RS16125 PF06791 Prophage tail length tape measure protein ABB88_RS16270 PF03180 NLPA lipoprotein ABB88_RS16280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABB88_RS16280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABB88_RS16285 PF00005 ABC transporter ABB88_RS16290 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS16290 PF00005 ABC transporter ABB88_RS16295 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS16300 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS16305 PF13458 Periplasmic binding protein ABB88_RS16310 PF01425 Amidase ABB88_RS16315 PF00484 Carbonic anhydrase ABB88_RS16330 PF00570 HRDC domain ABB88_RS16330 PF16124 RecQ zinc-binding ABB88_RS16330 PF00270 DEAD/DEAH box helicase ABB88_RS16330 PF09382 RQC domain ABB88_RS16330 PF00271 Helicase conserved C-terminal domain ABB88_RS16335 PF17864 RuvB AAA lid domain ABB88_RS16335 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABB88_RS16335 PF05491 RuvB C-terminal winged helix domain ABB88_RS16340 PF00291 Pyridoxal-phosphate dependent enzyme ABB88_RS16345 PF01370 NAD dependent epimerase/dehydratase family ABB88_RS16350 PF07499 RuvA, C-terminal domain ABB88_RS16350 PF01330 RuvA N terminal domain ABB88_RS16355 PF02075 Crossover junction endodeoxyribonuclease RuvC ABB88_RS16360 PF02142 MGS-like domain ABB88_RS16360 PF01808 AICARFT/IMPCHase bienzyme ABB88_RS16365 PF02954 Bacterial regulatory protein, Fis family ABB88_RS16370 PF01207 Dihydrouridine synthase (Dus) ABB88_RS16375 PF01494 FAD binding domain ABB88_RS16385 PF00557 Metallopeptidase family M24 ABB88_RS16385 PF05195 Aminopeptidase P, N-terminal domain ABB88_RS16410 PF13609 Gram-negative porin ABB88_RS16420 PF00483 Nucleotidyl transferase ABB88_RS16425 PF01435 Peptidase family M48 ABB88_RS16425 PF13181 Tetratricopeptide repeat ABB88_RS16430 PF00561 alpha/beta hydrolase fold ABB88_RS16445 PF01063 Amino-transferase class IV ABB88_RS16460 PF00271 Helicase conserved C-terminal domain ABB88_RS16460 PF00270 DEAD/DEAH box helicase ABB88_RS16480 PF02464 Competence-damaged protein ABB88_RS16480 PF18146 Damage-inducible protein CinA KH domain ABB88_RS16480 PF00994 Probable molybdopterin binding domain ABB88_RS16485 PF09339 IclR helix-turn-helix domain ABB88_RS16485 PF01614 Bacterial transcriptional regulator ABB88_RS16490 PF18807 Tripartite Tc toxins repeat ABB88_RS16490 PF05785 Rho-activating domain of cytotoxic necrotizing factor ABB88_RS16495 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS16505 PF01180 Dihydroorotate dehydrogenase ABB88_RS16510 PF04376 Arginine-tRNA-protein transferase, N terminus ABB88_RS16510 PF04377 Arginine-tRNA-protein transferase, C terminus ABB88_RS16515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABB88_RS16525 PF03466 LysR substrate binding domain ABB88_RS16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS16565 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS16565 PF07729 FCD domain ABB88_RS16570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS16570 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS16570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS16575 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS16580 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABB88_RS16585 PF03949 Malic enzyme, NAD binding domain ABB88_RS16585 PF01515 Phosphate acetyl/butaryl transferase ABB88_RS16585 PF00390 Malic enzyme, N-terminal domain ABB88_RS16595 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS16600 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS16605 PF00005 ABC transporter ABB88_RS16605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS16620 PF03466 LysR substrate binding domain ABB88_RS16635 PF01022 Bacterial regulatory protein, arsR family ABB88_RS16650 PF03594 Benzoate membrane transport protein ABB88_RS16655 PF00037 4Fe-4S binding domain ABB88_RS16660 PF01467 Cytidylyltransferase-like ABB88_RS16670 PF00448 SRP54-type protein, GTPase domain ABB88_RS16670 PF02881 SRP54-type protein, helical bundle domain ABB88_RS16680 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS16685 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS16690 PF00005 ABC transporter ABB88_RS16700 PF00005 ABC transporter ABB88_RS16720 PF00925 GTP cyclohydrolase II ABB88_RS16720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABB88_RS16725 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABB88_RS16730 PF01029 NusB family ABB88_RS16735 PF00586 AIR synthase related protein, N-terminal domain ABB88_RS16735 PF02769 AIR synthase related protein, C-terminal domain ABB88_RS16740 PF04608 Phosphatidylglycerophosphatase A ABB88_RS16745 PF18146 Damage-inducible protein CinA KH domain ABB88_RS16745 PF00994 Probable molybdopterin binding domain ABB88_RS16745 PF02464 Competence-damaged protein ABB88_RS16750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABB88_RS16755 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS16760 PF01219 Prokaryotic diacylglycerol kinase ABB88_RS16765 PF03631 Virulence factor BrkB ABB88_RS16770 PF03797 Autotransporter beta-domain ABB88_RS16770 PF03212 Pertactin ABB88_RS16775 PF00118 TCP-1/cpn60 chaperonin family ABB88_RS16780 PF00166 Chaperonin 10 Kd subunit ABB88_RS16800 PF00890 FAD binding domain ABB88_RS16810 PF03466 LysR substrate binding domain ABB88_RS16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS16815 PF00890 FAD binding domain ABB88_RS16835 PF00990 Diguanylate cyclase, GGDEF domain ABB88_RS16840 PF00072 Response regulator receiver domain ABB88_RS16870 PF03781 Sulfatase-modifying factor enzyme 1 ABB88_RS16870 PF12867 DinB superfamily ABB88_RS16875 PF10017 Histidine-specific methyltransferase, SAM-dependent ABB88_RS16885 PF13396 Phospholipase_D-nuclease N-terminal ABB88_RS16885 PF13091 PLD-like domain ABB88_RS16895 PF01645 Conserved region in glutamate synthase ABB88_RS16900 PF04143 Sulphur transport ABB88_RS16905 PF03547 Membrane transport protein ABB88_RS16910 PF13673 Acetyltransferase (GNAT) domain ABB88_RS16930 PF00575 S1 RNA binding domain ABB88_RS16930 PF00773 RNB domain ABB88_RS16930 PF08206 Ribonuclease B OB domain ABB88_RS16930 PF08461 Ribonuclease R winged-helix domain ABB88_RS16930 PF17876 Cold shock domain ABB88_RS16935 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABB88_RS16935 PF00588 SpoU rRNA Methylase family ABB88_RS16940 PF01053 Cys/Met metabolism PLP-dependent enzyme ABB88_RS16945 PF18331 PKHD-type hydroxylase C-terminal domain ABB88_RS16945 PF13640 2OG-Fe(II) oxygenase superfamily ABB88_RS16950 PF00216 Bacterial DNA-binding protein ABB88_RS16965 PF01618 MotA/TolQ/ExbB proton channel family ABB88_RS16970 PF02472 Biopolymer transport protein ExbD/TolR ABB88_RS16975 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS16975 PF00072 Response regulator receiver domain ABB88_RS16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS16980 PF08521 Two-component sensor kinase N-terminal ABB88_RS16980 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS16985 PF02705 K+ potassium transporter ABB88_RS16990 PF00764 Arginosuccinate synthase ABB88_RS16995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABB88_RS16995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABB88_RS17000 PF00202 Aminotransferase class-III ABB88_RS17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS17010 PF03466 LysR substrate binding domain ABB88_RS17020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABB88_RS17020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABB88_RS17025 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17040 PF07729 FCD domain ABB88_RS17040 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS17050 PF07690 Major Facilitator Superfamily ABB88_RS17060 PF02627 Carboxymuconolactone decarboxylase family ABB88_RS17065 PF00578 AhpC/TSA family ABB88_RS17070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS17070 PF00672 HAMP domain ABB88_RS17070 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS17080 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS17080 PF00072 Response regulator receiver domain ABB88_RS17085 PF00814 Glycoprotease family ABB88_RS17090 PF03167 Uracil DNA glycosylase superfamily ABB88_RS17095 PF07690 Major Facilitator Superfamily ABB88_RS17100 PF02463 RecF/RecN/SMC N terminal domain ABB88_RS17100 PF06470 SMC proteins Flexible Hinge Domain ABB88_RS17110 PF03120 NAD-dependent DNA ligase OB-fold domain ABB88_RS17110 PF00533 BRCA1 C Terminus (BRCT) domain ABB88_RS17110 PF01653 NAD-dependent DNA ligase adenylation domain ABB88_RS17110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABB88_RS17110 PF12826 Helix-hairpin-helix motif ABB88_RS17125 PF04279 Intracellular septation protein A ABB88_RS17130 PF01641 SelR domain ABB88_RS17135 PF00005 ABC transporter ABB88_RS17140 PF02361 Cobalt transport protein ABB88_RS17145 PF02632 BioY family ABB88_RS17160 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS17160 PF00005 ABC transporter ABB88_RS17165 PF01063 Amino-transferase class IV ABB88_RS17180 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS17190 PF00005 ABC transporter ABB88_RS17195 PF00005 ABC transporter ABB88_RS17195 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS17200 PF00730 HhH-GPD superfamily base excision DNA repair protein ABB88_RS17200 PF00633 Helix-hairpin-helix motif ABB88_RS17200 PF10576 Iron-sulfur binding domain of endonuclease III ABB88_RS17205 PF04060 Putative Fe-S cluster ABB88_RS17215 PF00970 Oxidoreductase FAD-binding domain ABB88_RS17215 PF00175 Oxidoreductase NAD-binding domain ABB88_RS17220 PF11953 Domain of unknown function (DUF3470) ABB88_RS17220 PF00037 4Fe-4S binding domain ABB88_RS17225 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABB88_RS17225 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABB88_RS17230 PF01042 Endoribonuclease L-PSP ABB88_RS17240 PF06167 Glucose-regulated metallo-peptidase M90 ABB88_RS17245 PF13291 ACT domain ABB88_RS17245 PF02824 TGS domain ABB88_RS17245 PF04607 Region found in RelA / SpoT proteins ABB88_RS17250 PF01546 Peptidase family M20/M25/M40 ABB88_RS17250 PF07687 Peptidase dimerisation domain ABB88_RS17255 PF00291 Pyridoxal-phosphate dependent enzyme ABB88_RS17260 PF00290 Tryptophan synthase alpha chain ABB88_RS17265 PF01039 Carboxyl transferase domain ABB88_RS17265 PF17848 Acetyl-coA carboxylase zinc finger domain ABB88_RS17270 PF09411 Lipid A 3-O-deacylase (PagL) ABB88_RS17285 PF00575 S1 RNA binding domain ABB88_RS17285 PF10150 Ribonuclease E/G family ABB88_RS17285 PF12111 Polyribonucleotide phosphorylase C terminal ABB88_RS17290 PF00849 RNA pseudouridylate synthase ABB88_RS17290 PF01479 S4 domain ABB88_RS17295 PF13419 Haloacid dehalogenase-like hydrolase ABB88_RS17300 PF00174 Oxidoreductase molybdopterin binding domain ABB88_RS17305 PF01794 Ferric reductase like transmembrane component ABB88_RS17320 PF02515 CoA-transferase family III ABB88_RS17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS17325 PF03466 LysR substrate binding domain ABB88_RS17335 PF02515 CoA-transferase family III ABB88_RS17340 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17350 PF03466 LysR substrate binding domain ABB88_RS17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS17355 PF01042 Endoribonuclease L-PSP ABB88_RS17360 PF00970 Oxidoreductase FAD-binding domain ABB88_RS17360 PF00175 Oxidoreductase NAD-binding domain ABB88_RS17360 PF00042 Globin ABB88_RS17365 PF02667 Short chain fatty acid transporter ABB88_RS17370 PF00171 Aldehyde dehydrogenase family ABB88_RS17375 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS17375 PF07729 FCD domain ABB88_RS17385 PF00313 'Cold-shock' DNA-binding domain ABB88_RS17390 PF03466 LysR substrate binding domain ABB88_RS17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS17410 PF00108 Thiolase, N-terminal domain ABB88_RS17410 PF02803 Thiolase, C-terminal domain ABB88_RS17420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS17420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS17420 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS17425 PF03466 LysR substrate binding domain ABB88_RS17425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS17430 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17435 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS17440 PF02515 CoA-transferase family III ABB88_RS17445 PF03741 Integral membrane protein TerC family ABB88_RS17445 PF03471 Transporter associated domain ABB88_RS17450 PF02308 MgtC family ABB88_RS17455 PF03144 Elongation factor Tu domain 2 ABB88_RS17455 PF00679 Elongation factor G C-terminus ABB88_RS17455 PF14492 Elongation Factor G, domain II ABB88_RS17455 PF03764 Elongation factor G, domain IV ABB88_RS17455 PF00009 Elongation factor Tu GTP binding domain ABB88_RS17460 PF00155 Aminotransferase class I and II ABB88_RS17460 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS17470 PF00582 Universal stress protein family ABB88_RS17475 PF00679 Elongation factor G C-terminus ABB88_RS17475 PF14492 Elongation Factor G, domain II ABB88_RS17475 PF03764 Elongation factor G, domain IV ABB88_RS17475 PF00009 Elongation factor Tu GTP binding domain ABB88_RS17475 PF03144 Elongation factor Tu domain 2 ABB88_RS17485 PF00701 Dihydrodipicolinate synthetase family ABB88_RS17490 PF03466 LysR substrate binding domain ABB88_RS17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS17495 PF02515 CoA-transferase family III ABB88_RS17500 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS17505 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS17505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS17510 PF01575 MaoC like domain ABB88_RS17525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABB88_RS17525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABB88_RS17530 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS17535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS17535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS17535 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS17540 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17545 PF13380 CoA binding domain ABB88_RS17545 PF13607 Succinyl-CoA ligase like flavodoxin domain ABB88_RS17555 PF00676 Dehydrogenase E1 component ABB88_RS17560 PF02779 Transketolase, pyrimidine binding domain ABB88_RS17560 PF02780 Transketolase, C-terminal domain ABB88_RS17565 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS17570 PF02817 e3 binding domain ABB88_RS17570 PF00364 Biotin-requiring enzyme ABB88_RS17570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABB88_RS17575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS17575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS17575 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS17580 PF00501 AMP-binding enzyme ABB88_RS17580 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS17590 PF13458 Periplasmic binding protein ABB88_RS17595 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS17600 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABB88_RS17600 PF00005 ABC transporter ABB88_RS17605 PF00005 ABC transporter ABB88_RS17610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABB88_RS17610 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS17625 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17640 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17650 PF00899 ThiF family ABB88_RS17655 PF03572 Peptidase family S41 ABB88_RS17655 PF13180 PDZ domain ABB88_RS17660 PF01551 Peptidase family M23 ABB88_RS17665 PF00300 Histidine phosphatase superfamily (branch 1) ABB88_RS17670 PF00581 Rhodanese-like domain ABB88_RS17670 PF12368 Rhodanase C-terminal ABB88_RS17670 PF17773 UPF0176 acylphosphatase like domain ABB88_RS17675 PF00462 Glutaredoxin ABB88_RS17680 PF02556 Preprotein translocase subunit SecB ABB88_RS17685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABB88_RS17685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABB88_RS17690 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17695 PF00588 SpoU rRNA Methylase family ABB88_RS17705 PF08241 Methyltransferase domain ABB88_RS17710 PF04107 Glutamate-cysteine ligase family 2(GCS2) ABB88_RS17715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABB88_RS17725 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS17730 PF00005 ABC transporter ABB88_RS17740 PF01799 [2Fe-2S] binding domain ABB88_RS17740 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS17745 PF03450 CO dehydrogenase flavoprotein C-terminal domain ABB88_RS17745 PF00941 FAD binding domain in molybdopterin dehydrogenase ABB88_RS17750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABB88_RS17750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABB88_RS17755 PF03480 Bacterial extracellular solute-binding protein, family 7 ABB88_RS17760 PF00355 Rieske [2Fe-2S] domain ABB88_RS17765 PF14759 Reductase C-terminal ABB88_RS17765 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS17770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABB88_RS17770 PF00355 Rieske [2Fe-2S] domain ABB88_RS17780 PF00857 Isochorismatase family ABB88_RS17790 PF00561 alpha/beta hydrolase fold ABB88_RS17795 PF17645 Arylmalonate decarboxylase ABB88_RS17805 PF12804 MobA-like NTP transferase domain ABB88_RS17815 PF01047 MarR family ABB88_RS17820 PF02386 Cation transport protein ABB88_RS17825 PF02080 TrkA-C domain ABB88_RS17825 PF02254 TrkA-N domain ABB88_RS17830 PF00072 Response regulator receiver domain ABB88_RS17830 PF02954 Bacterial regulatory protein, Fis family ABB88_RS17830 PF00158 Sigma-54 interaction domain ABB88_RS17835 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS17835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS17835 PF00989 PAS fold ABB88_RS17835 PF00672 HAMP domain ABB88_RS17845 PF01189 16S rRNA methyltransferase RsmB/F ABB88_RS17845 PF01029 NusB family ABB88_RS17855 PF03447 Homoserine dehydrogenase, NAD binding domain ABB88_RS17855 PF01958 Domain of unknown function DUF108 ABB88_RS17880 PF01810 LysE type translocator ABB88_RS17885 PF03466 LysR substrate binding domain ABB88_RS17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS17895 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS17900 PF01168 Alanine racemase, N-terminal domain ABB88_RS17905 PF00155 Aminotransferase class I and II ABB88_RS17910 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS17920 PF00682 HMGL-like ABB88_RS17925 PF17782 DprA winged helix domain ABB88_RS17925 PF02481 DNA recombination-mediator protein A ABB88_RS17930 PF01037 Lrp/AsnC ligand binding domain ABB88_RS17935 PF00266 Aminotransferase class-V ABB88_RS17940 PF01327 Polypeptide deformylase ABB88_RS17955 PF00551 Formyl transferase ABB88_RS17955 PF02911 Formyl transferase, C-terminal domain ABB88_RS17965 PF13419 Haloacid dehalogenase-like hydrolase ABB88_RS17975 PF03641 Possible lysine decarboxylase ABB88_RS17985 PF04055 Radical SAM superfamily ABB88_RS17985 PF18693 TRAM domain ABB88_RS17985 PF00919 Uncharacterized protein family UPF0004 ABB88_RS17990 PF01361 Tautomerase enzyme ABB88_RS17995 PF01266 FAD dependent oxidoreductase ABB88_RS18000 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS18005 PF07729 FCD domain ABB88_RS18005 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS18020 PF00202 Aminotransferase class-III ABB88_RS18025 PF00491 Arginase family ABB88_RS18035 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS18040 PF02627 Carboxymuconolactone decarboxylase family ABB88_RS18045 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS18050 PF09339 IclR helix-turn-helix domain ABB88_RS18050 PF01614 Bacterial transcriptional regulator ABB88_RS18055 PF13193 AMP-binding enzyme C-terminal domain ABB88_RS18055 PF00501 AMP-binding enzyme ABB88_RS18060 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS18070 PF12951 Passenger-associated-transport-repeat ABB88_RS18070 PF12951 Passenger-associated-transport-repeat ABB88_RS18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS18090 PF03466 LysR substrate binding domain ABB88_RS18100 PF14031 Putative serine dehydratase domain ABB88_RS18100 PF01168 Alanine racemase, N-terminal domain ABB88_RS18105 PF07411 Domain of unknown function (DUF1508) ABB88_RS18110 PF01145 SPFH domain / Band 7 family ABB88_RS18120 PF01042 Endoribonuclease L-PSP ABB88_RS18165 PF03837 RecT family ABB88_RS18200 PF00589 Phage integrase family ABB88_RS18205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS18205 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS18220 PF03466 LysR substrate binding domain ABB88_RS18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS18225 PF02525 Flavodoxin-like fold ABB88_RS18235 PF02096 60Kd inner membrane protein ABB88_RS18235 PF14849 YidC periplasmic domain ABB88_RS18240 PF01809 Putative membrane protein insertion efficiency factor ABB88_RS18245 PF00825 Ribonuclease P ABB88_RS18250 PF00468 Ribosomal protein L34 ABB88_RS18255 PF08299 Bacterial dnaA protein helix-turn-helix ABB88_RS18255 PF11638 DnaA N-terminal domain ABB88_RS18255 PF00308 Bacterial dnaA protein ABB88_RS18260 PF02768 DNA polymerase III beta subunit, C-terminal domain ABB88_RS18260 PF02767 DNA polymerase III beta subunit, central domain ABB88_RS18260 PF00712 DNA polymerase III beta subunit, N-terminal domain ABB88_RS18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS18265 PF18053 DNA gyrase B subunit insert domain ABB88_RS18265 PF01751 Toprim domain ABB88_RS18265 PF00204 DNA gyrase B ABB88_RS18265 PF00986 DNA gyrase B subunit, carboxyl terminus ABB88_RS18270 PF09339 IclR helix-turn-helix domain ABB88_RS18270 PF01614 Bacterial transcriptional regulator ABB88_RS18275 PF01425 Amidase ABB88_RS18280 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS18285 PF00708 Acylphosphatase ABB88_RS18290 PF01070 FMN-dependent dehydrogenase ABB88_RS18310 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS18310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS18310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS18315 PF00376 MerR family regulatory protein ABB88_RS18315 PF09278 MerR, DNA binding ABB88_RS18330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABB88_RS18330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABB88_RS18330 PF02770 Acyl-CoA dehydrogenase, middle domain ABB88_RS18345 PF01039 Carboxyl transferase domain ABB88_RS18350 PF00364 Biotin-requiring enzyme ABB88_RS18350 PF00289 Biotin carboxylase, N-terminal domain ABB88_RS18350 PF02785 Biotin carboxylase C-terminal domain ABB88_RS18350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABB88_RS18360 PF00202 Aminotransferase class-III ABB88_RS18365 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS18370 PF14031 Putative serine dehydratase domain ABB88_RS18370 PF01168 Alanine racemase, N-terminal domain ABB88_RS18375 PF16868 NMT1-like family ABB88_RS18385 PF00593 TonB dependent receptor ABB88_RS18385 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS18390 PF04361 Protein of unknown function (DUF494) ABB88_RS18405 PF01751 Toprim domain ABB88_RS18405 PF01131 DNA topoisomerase ABB88_RS18415 PF00005 ABC transporter ABB88_RS18420 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS18430 PF00171 Aldehyde dehydrogenase family ABB88_RS18440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABB88_RS18440 PF00205 Thiamine pyrophosphate enzyme, central domain ABB88_RS18440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABB88_RS18445 PF01037 Lrp/AsnC ligand binding domain ABB88_RS18450 PF01062 Bestrophin, RFP-TM, chloride channel ABB88_RS18460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABB88_RS18475 PF02310 B12 binding domain ABB88_RS18475 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABB88_RS18475 PF00809 Pterin binding enzyme ABB88_RS18475 PF02574 Homocysteine S-methyltransferase ABB88_RS18475 PF02607 B12 binding domain ABB88_RS18480 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS18480 PF00593 TonB dependent receptor ABB88_RS18485 PF01497 Periplasmic binding protein ABB88_RS18490 PF05690 Thiazole biosynthesis protein ThiG ABB88_RS18495 PF08543 Phosphomethylpyrimidine kinase ABB88_RS18510 PF02321 Outer membrane efflux protein ABB88_RS18515 PF01467 Cytidylyltransferase-like ABB88_RS18525 PF01594 AI-2E family transporter ABB88_RS18535 PF07885 Ion channel ABB88_RS18535 PF02254 TrkA-N domain ABB88_RS18545 PF00164 Ribosomal protein S12/S23 ABB88_RS18550 PF00177 Ribosomal protein S7p/S5e ABB88_RS18555 PF14492 Elongation Factor G, domain II ABB88_RS18555 PF03764 Elongation factor G, domain IV ABB88_RS18555 PF00009 Elongation factor Tu GTP binding domain ABB88_RS18555 PF03144 Elongation factor Tu domain 2 ABB88_RS18555 PF00679 Elongation factor G C-terminus ABB88_RS18560 PF03143 Elongation factor Tu C-terminal domain ABB88_RS18560 PF03144 Elongation factor Tu domain 2 ABB88_RS18560 PF00009 Elongation factor Tu GTP binding domain ABB88_RS18565 PF00338 Ribosomal protein S10p/S20e ABB88_RS18570 PF00297 Ribosomal protein L3 ABB88_RS18575 PF00573 Ribosomal protein L4/L1 family ABB88_RS18580 PF00276 Ribosomal protein L23 ABB88_RS18585 PF00181 Ribosomal Proteins L2, RNA binding domain ABB88_RS18585 PF03947 Ribosomal Proteins L2, C-terminal domain ABB88_RS18590 PF00203 Ribosomal protein S19 ABB88_RS18595 PF00237 Ribosomal protein L22p/L17e ABB88_RS18600 PF00189 Ribosomal protein S3, C-terminal domain ABB88_RS18600 PF07650 KH domain ABB88_RS18605 PF00252 Ribosomal protein L16p/L10e ABB88_RS18610 PF00831 Ribosomal L29 protein ABB88_RS18615 PF00366 Ribosomal protein S17 ABB88_RS18625 PF00171 Aldehyde dehydrogenase family ABB88_RS18635 PF00238 Ribosomal protein L14p/L23e ABB88_RS18640 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABB88_RS18645 PF00673 ribosomal L5P family C-terminus ABB88_RS18645 PF00281 Ribosomal protein L5 ABB88_RS18650 PF00253 Ribosomal protein S14p/S29e ABB88_RS18655 PF00410 Ribosomal protein S8 ABB88_RS18660 PF00347 Ribosomal protein L6 ABB88_RS18665 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABB88_RS18670 PF03719 Ribosomal protein S5, C-terminal domain ABB88_RS18670 PF00333 Ribosomal protein S5, N-terminal domain ABB88_RS18675 PF00327 Ribosomal protein L30p/L7e ABB88_RS18680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABB88_RS18685 PF00344 SecY translocase ABB88_RS18690 PF01176 Translation initiation factor 1A / IF-1 ABB88_RS18695 PF00444 Ribosomal protein L36 ABB88_RS18700 PF00416 Ribosomal protein S13/S18 ABB88_RS18705 PF00411 Ribosomal protein S11 ABB88_RS18710 PF01479 S4 domain ABB88_RS18710 PF00163 Ribosomal protein S4/S9 N-terminal domain ABB88_RS18715 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABB88_RS18715 PF01000 RNA polymerase Rpb3/RpoA insert domain ABB88_RS18715 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABB88_RS18720 PF01196 Ribosomal protein L17 ABB88_RS18725 PF01230 HIT domain ABB88_RS18730 PF03091 CutA1 divalent ion tolerance protein ABB88_RS18735 PF11412 Disulphide bond corrector protein DsbC ABB88_RS18735 PF02683 Cytochrome C biogenesis protein transmembrane region ABB88_RS18740 PF00892 EamA-like transporter family ABB88_RS18745 PF00490 Delta-aminolevulinic acid dehydratase ABB88_RS18750 PF01926 50S ribosome-binding GTPase ABB88_RS18755 PF00034 Cytochrome c ABB88_RS18760 PF05140 ResB-like family ABB88_RS18765 PF01578 Cytochrome C assembly protein ABB88_RS18770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABB88_RS18770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABB88_RS18775 PF13627 Prokaryotic lipoprotein-attachment site ABB88_RS18780 PF01491 Frataxin-like domain ABB88_RS18785 PF00905 Penicillin binding protein transpeptidase domain ABB88_RS18785 PF00912 Transglycosylase ABB88_RS18785 PF17092 Penicillin-binding protein OB-like domain ABB88_RS18790 PF01202 Shikimate kinase ABB88_RS18795 PF01761 3-dehydroquinate synthase ABB88_RS18800 PF01966 HD domain ABB88_RS18800 PF13286 Phosphohydrolase-associated domain ABB88_RS18805 PF13417 Glutathione S-transferase, N-terminal domain ABB88_RS18805 PF00043 Glutathione S-transferase, C-terminal domain ABB88_RS18810 PF17755 UvrA DNA-binding domain ABB88_RS18810 PF17760 UvrA interaction domain ABB88_RS18815 PF07690 Major Facilitator Superfamily ABB88_RS18820 PF00436 Single-strand binding protein family ABB88_RS18825 PF07715 TonB-dependent Receptor Plug Domain ABB88_RS18825 PF00593 TonB dependent receptor ABB88_RS18835 PF03328 HpcH/HpaI aldolase/citrate lyase family ABB88_RS18845 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS18855 PF03466 LysR substrate binding domain ABB88_RS18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS18860 PF01979 Amidohydrolase family ABB88_RS18865 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS18870 PF00534 Glycosyl transferases group 1 ABB88_RS18870 PF13439 Glycosyltransferase Family 4 ABB88_RS18880 PF03466 LysR substrate binding domain ABB88_RS18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS18890 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS18895 PF00005 ABC transporter ABB88_RS18915 PF01274 Malate synthase ABB88_RS18920 PF07729 FCD domain ABB88_RS18920 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS18935 PF01040 UbiA prenyltransferase family ABB88_RS18940 PF00155 Aminotransferase class I and II ABB88_RS18945 PF13185 GAF domain ABB88_RS18950 PF00701 Dihydrodipicolinate synthetase family ABB88_RS18965 PF01476 LysM domain ABB88_RS18965 PF04972 BON domain ABB88_RS18970 PF02597 ThiS family ABB88_RS18970 PF05690 Thiazole biosynthesis protein ThiG ABB88_RS18975 PF00561 alpha/beta hydrolase fold ABB88_RS18980 PF02390 Putative methyltransferase ABB88_RS18995 PF00682 HMGL-like ABB88_RS19000 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS19020 PF07702 UTRA domain ABB88_RS19020 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS19025 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS19035 PF07702 UTRA domain ABB88_RS19035 PF00392 Bacterial regulatory proteins, gntR family ABB88_RS19040 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS19050 PF00005 ABC transporter ABB88_RS19055 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS19060 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS19065 PF08240 Alcohol dehydrogenase GroES-like domain ABB88_RS19065 PF08990 Erythronolide synthase docking ABB88_RS19065 PF14765 Polyketide synthase dehydratase ABB88_RS19065 PF16197 Ketoacyl-synthetase C-terminal extension ABB88_RS19065 PF00109 Beta-ketoacyl synthase, N-terminal domain ABB88_RS19065 PF00698 Acyl transferase domain ABB88_RS19065 PF00550 Phosphopantetheine attachment site ABB88_RS19065 PF02801 Beta-ketoacyl synthase, C-terminal domain ABB88_RS19065 PF08659 KR domain ABB88_RS19070 PF02515 CoA-transferase family III ABB88_RS19075 PF00440 Bacterial regulatory proteins, tetR family ABB88_RS19080 PF00293 NUDIX domain ABB88_RS19080 PF09297 NADH pyrophosphatase zinc ribbon domain ABB88_RS19085 PF00111 2Fe-2S iron-sulfur cluster binding domain ABB88_RS19085 PF00175 Oxidoreductase NAD-binding domain ABB88_RS19085 PF00970 Oxidoreductase FAD-binding domain ABB88_RS19090 PF01425 Amidase ABB88_RS19100 PF03466 LysR substrate binding domain ABB88_RS19100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABB88_RS19105 PF13458 Periplasmic binding protein ABB88_RS19115 PF00005 ABC transporter ABB88_RS19125 PF02653 Branched-chain amino acid transport system / permease component ABB88_RS19135 PF00355 Rieske [2Fe-2S] domain ABB88_RS19150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABB88_RS19150 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABB88_RS19165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABB88_RS19165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABB88_RS19165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABB88_RS19170 PF07690 Major Facilitator Superfamily ABB88_RS19175 PF14602 Hexapeptide repeat of succinyl-transferase ABB88_RS19175 PF12804 MobA-like NTP transferase domain ABB88_RS19175 PF00132 Bacterial transferase hexapeptide (six repeats) ABB88_RS19195 PF02630 SCO1/SenC ABB88_RS19200 PF01040 UbiA prenyltransferase family ABB88_RS19205 PF02628 Cytochrome oxidase assembly protein ABB88_RS19225 PF00510 Cytochrome c oxidase subunit III ABB88_RS19240 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABB88_RS19245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABB88_RS19245 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABB88_RS19255 PF00999 Sodium/hydrogen exchanger family ABB88_RS19260 PF00149 Calcineurin-like phosphoesterase ABB88_RS19265 PF00140 Sigma-70 factor, region 1.2 ABB88_RS19265 PF04545 Sigma-70, region 4 ABB88_RS19265 PF04542 Sigma-70 region 2 ABB88_RS19275 PF00756 Putative esterase ABB88_RS19280 PF08240 Alcohol dehydrogenase GroES-like domain ABB88_RS19280 PF00107 Zinc-binding dehydrogenase ABB88_RS19290 PF00310 Glutamine amidotransferases class-II ABB88_RS19290 PF04898 Glutamate synthase central domain ABB88_RS19290 PF01493 GXGXG motif ABB88_RS19290 PF01645 Conserved region in glutamate synthase ABB88_RS19295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABB88_RS19295 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABB88_RS19300 PF03922 OmpW family ABB88_RS19305 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS19310 PF00005 ABC transporter ABB88_RS19315 PF02405 Permease MlaE ABB88_RS19320 PF02470 MlaD protein ABB88_RS19325 PF04333 MlaA lipoprotein ABB88_RS19335 PF00005 ABC transporter ABB88_RS19340 PF01061 ABC-2 type transporter ABB88_RS19350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABB88_RS19355 PF01634 ATP phosphoribosyltransferase ABB88_RS19360 PF00815 Histidinol dehydrogenase ABB88_RS19365 PF00155 Aminotransferase class I and II ABB88_RS19370 PF00475 Imidazoleglycerol-phosphate dehydratase ABB88_RS19375 PF00117 Glutamine amidotransferase class-I ABB88_RS19380 PF00977 Histidine biosynthesis protein ABB88_RS19385 PF00977 Histidine biosynthesis protein ABB88_RS19390 PF01502 Phosphoribosyl-AMP cyclohydrolase ABB88_RS19395 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABB88_RS19400 PF01230 HIT domain ABB88_RS19405 PF02416 mttA/Hcf106 family ABB88_RS19410 PF02416 mttA/Hcf106 family ABB88_RS19415 PF00902 Sec-independent protein translocase protein (TatC) ABB88_RS19425 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS19430 PF02917 Pertussis toxin, subunit 1 ABB88_RS19435 PF03440 Aerolysin/Pertussis toxin (APT) domain ABB88_RS19435 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain ABB88_RS19440 PF09275 Pertussis toxin S4 subunit ABB88_RS19445 PF09276 Pertussis toxin S5 subunit ABB88_RS19450 PF03440 Aerolysin/Pertussis toxin (APT) domain ABB88_RS19450 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain ABB88_RS19455 PF04956 TrbC/VIRB2 family ABB88_RS19460 PF05101 Type IV secretory pathway, VirB3-like protein ABB88_RS19465 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ABB88_RS19470 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ABB88_RS19480 PF04335 VirB8 protein ABB88_RS19485 PF03524 Conjugal transfer protein ABB88_RS19490 PF03743 Bacterial conjugation TrbI-like protein ABB88_RS19495 PF00437 Type II/IV secretion system protein ABB88_RS19505 PF00892 EamA-like transporter family ABB88_RS19525 PF10396 GTP-binding protein TrmE N-terminus ABB88_RS19525 PF12631 MnmE helical domain ABB88_RS19525 PF01926 50S ribosome-binding GTPase ABB88_RS19530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS19535 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS19540 PF12911 N-terminal TM domain of oligopeptide transport permease C ABB88_RS19540 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS19545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS19545 PF00005 ABC transporter ABB88_RS19555 PF01960 ArgJ family ABB88_RS19565 PF00293 NUDIX domain ABB88_RS19585 PF02321 Outer membrane efflux protein ABB88_RS19590 PF00873 AcrB/AcrD/AcrF family ABB88_RS19595 PF00873 AcrB/AcrD/AcrF family ABB88_RS19600 PF13533 Biotin-lipoyl like ABB88_RS19605 PF07072 Cell division protein ABB88_RS19610 PF01121 Dephospho-CoA kinase ABB88_RS19615 PF01478 Type IV leader peptidase family ABB88_RS19615 PF06750 Bacterial Peptidase A24 N-terminal domain ABB88_RS19630 PF02569 Pantoate-beta-alanine ligase ABB88_RS19635 PF02616 Segregation and condensation protein ScpA ABB88_RS19645 PF07690 Major Facilitator Superfamily ABB88_RS19650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABB88_RS19650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABB88_RS19660 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS19665 PF00005 ABC transporter ABB88_RS19670 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS19675 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS19680 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABB88_RS19685 PF00005 ABC transporter ABB88_RS19690 PF18075 FtsX extracellular domain ABB88_RS19695 PF03975 CheD chemotactic sensory transduction ABB88_RS19705 PF00633 Helix-hairpin-helix motif ABB88_RS19705 PF14815 NUDIX domain ABB88_RS19705 PF00730 HhH-GPD superfamily base excision DNA repair protein ABB88_RS19705 PF10576 Iron-sulfur binding domain of endonuclease III ABB88_RS19715 PF08241 Methyltransferase domain ABB88_RS19725 PF02515 CoA-transferase family III ABB88_RS19730 PF02515 CoA-transferase family III ABB88_RS19740 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS19745 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS19750 PF00881 Nitroreductase family ABB88_RS19760 PF00682 HMGL-like ABB88_RS19765 PF00378 Enoyl-CoA hydratase/isomerase ABB88_RS19770 PF02515 CoA-transferase family III ABB88_RS19775 PF03401 Tripartite tricarboxylate transporter family receptor ABB88_RS19785 PF06628 Catalase-related immune-responsive ABB88_RS19785 PF00199 Catalase ABB88_RS19790 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS19795 PF00005 ABC transporter ABB88_RS19805 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABB88_RS19810 PF01546 Peptidase family M20/M25/M40 ABB88_RS19810 PF07687 Peptidase dimerisation domain ABB88_RS19815 PF00005 ABC transporter ABB88_RS19815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS19820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABB88_RS19820 PF00005 ABC transporter ABB88_RS19825 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS19825 PF12911 N-terminal TM domain of oligopeptide transport permease C ABB88_RS19830 PF00528 Binding-protein-dependent transport system inner membrane component ABB88_RS19835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABB88_RS19840 PF01926 50S ribosome-binding GTPase ABB88_RS19840 PF10396 GTP-binding protein TrmE N-terminus ABB88_RS19840 PF12631 MnmE helical domain ABB88_RS19850 PF00072 Response regulator receiver domain ABB88_RS19850 PF00486 Transcriptional regulatory protein, C terminal ABB88_RS19855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABB88_RS19855 PF00512 His Kinase A (phospho-acceptor) domain ABB88_RS19870 PF01970 Tripartite tricarboxylate transporter TctA family ABB88_RS19875 PF00155 Aminotransferase class I and II ABB88_RS19880 PF00313 'Cold-shock' DNA-binding domain