RD08_RS00005 IPR002218 Glucose-inhibited division protein A-related RD08_RS00005 IPR004416 Glucose-inhibited division protein A RD08_RS00005 IPR020595 Glucose-inhibited division protein A-related, conserved site RD08_RS00005 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS00005 IPR026904 GidA associated domain 3 RD08_RS00010 IPR003682 rRNA small subunit methyltransferase G RD08_RS00010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS00015 IPR025669 AAA domain RD08_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00020 IPR000182 GNAT domain RD08_RS00020 IPR016181 Acyl-CoA N-acyltransferase RD08_RS00025 IPR003115 ParB/Sulfiredoxin RD08_RS00025 IPR004437 ParB/RepB/Spo0J partition protein family RD08_RS00030 IPR006034 Asparaginase/glutaminase RD08_RS00030 IPR020827 Asparaginase/glutaminase, active site 1 RD08_RS00030 IPR027473 L-asparaginase, C-terminal domain RD08_RS00030 IPR027474 L-asparaginase, N-terminal RD08_RS00030 IPR027475 Asparaginase/glutaminase, active site 2 RD08_RS00035 IPR006034 Asparaginase/glutaminase RD08_RS00035 IPR027473 L-asparaginase, C-terminal domain RD08_RS00055 IPR000795 Elongation factor, GTP-binding domain RD08_RS00055 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RD08_RS00055 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD08_RS00055 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RD08_RS00055 IPR005225 Small GTP-binding protein domain RD08_RS00055 IPR009000 Translation protein, beta-barrel domain RD08_RS00055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RD08_RS00055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00055 IPR031157 RD08_RS00055 RD08_RS00065 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RD08_RS00065 IPR005807 SecE subunit of protein translocation complex RD08_RS00065 IPR022943 Preprotein translocase subunit SecE RD08_RS00070 IPR001062 Transcription antitermination protein, NusG RD08_RS00070 IPR005824 KOW RD08_RS00070 IPR006645 NusG, N-terminal RD08_RS00070 IPR008991 Translation protein SH3-like domain RD08_RS00070 IPR014722 Ribosomal protein L2 domain 2 RD08_RS00070 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RD08_RS00075 IPR000911 Ribosomal protein L11/L12 RD08_RS00075 IPR006519 Ribosomal protein L11, bacterial-type RD08_RS00075 IPR020783 Ribosomal protein L11, C-terminal RD08_RS00075 IPR020784 Ribosomal protein L11, N-terminal RD08_RS00075 IPR020785 Ribosomal protein L11, conserved site RD08_RS00080 IPR002143 Ribosomal protein L1 RD08_RS00080 IPR005878 Ribosomal protein L1, bacterial-type RD08_RS00080 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich RD08_RS00080 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RD08_RS00080 IPR023673 Ribosomal protein L1, conserved site RD08_RS00080 IPR023674 Ribosomal protein L1-like RD08_RS00080 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RD08_RS00085 IPR001790 Ribosomal protein L10/acidic P0 RD08_RS00085 IPR002363 Ribosomal protein L10, eubacterial, conserved site RD08_RS00085 IPR022973 Ribosomal protein L10 RD08_RS00090 IPR000206 Ribosomal protein L7/L12 RD08_RS00090 IPR008932 Ribosomal protein L7/L12, oligomerisation RD08_RS00090 IPR013823 Ribosomal protein L7/L12, C-terminal RD08_RS00090 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RD08_RS00095 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 RD08_RS00095 IPR007121 RNA polymerase, beta subunit, conserved site RD08_RS00095 IPR007641 RNA polymerase Rpb2, domain 7 RD08_RS00095 IPR007642 RNA polymerase Rpb2, domain 2 RD08_RS00095 IPR007644 RNA polymerase, beta subunit, protrusion RD08_RS00095 IPR007645 RNA polymerase Rpb2, domain 3 RD08_RS00095 IPR010243 DNA-directed RNA polymerase, beta subunit RD08_RS00095 IPR014724 RNA polymerase Rpb2, OB-fold RD08_RS00095 IPR015712 DNA-directed RNA polymerase, subunit 2 RD08_RS00095 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RD08_RS00100 IPR000722 RNA polymerase, alpha subunit RD08_RS00100 IPR006592 RNA polymerase, N-terminal RD08_RS00100 IPR007066 RNA polymerase Rpb1, domain 3 RD08_RS00100 IPR007080 RNA polymerase Rpb1, domain 1 RD08_RS00100 IPR007081 RNA polymerase Rpb1, domain 5 RD08_RS00100 IPR007083 RNA polymerase Rpb1, domain 4 RD08_RS00100 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RD08_RS00110 IPR011009 Protein kinase-like domain RD08_RS00120 IPR006860 FecR protein RD08_RS00120 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 RD08_RS00120 IPR018392 LysM domain RD08_RS00130 IPR001789 Signal transduction response regulator, receiver domain RD08_RS00130 IPR001867 Signal transduction response regulator, C-terminal RD08_RS00130 IPR011006 CheY-like superfamily RD08_RS00130 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00130 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS00135 IPR001584 Integrase, catalytic core RD08_RS00135 IPR009057 Homeodomain-like RD08_RS00135 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00135 IPR012337 Ribonuclease H-like domain RD08_RS00135 IPR024967 DNA-binding domain, IS481-type RD08_RS00140 IPR003673 CoA-transferase family III RD08_RS00140 IPR023606 CoA-transferase family III domain RD08_RS00145 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD08_RS00145 IPR012340 Nucleic acid-binding, OB-fold RD08_RS00145 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD08_RS00150 IPR002155 Thiolase RD08_RS00150 IPR016039 Thiolase-like RD08_RS00150 IPR020616 Thiolase, N-terminal RD08_RS00155 IPR002539 MaoC-like domain RD08_RS00155 IPR029069 HotDog domain RD08_RS00160 IPR000847 Transcription regulator HTH, LysR RD08_RS00160 IPR005119 LysR, substrate-binding RD08_RS00160 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00165 IPR001753 Crotonase superfamily RD08_RS00165 IPR029045 ClpP/crotonase-like domain RD08_RS00170 IPR005656 MmgE/PrpD RD08_RS00175 IPR001584 Integrase, catalytic core RD08_RS00175 IPR009057 Homeodomain-like RD08_RS00175 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00175 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00175 IPR012337 Ribonuclease H-like domain RD08_RS00175 IPR024967 DNA-binding domain, IS481-type RD08_RS00180 IPR011701 Major facilitator superfamily RD08_RS00180 IPR020846 Major facilitator superfamily domain RD08_RS00185 IPR002310 Glycine-tRNA ligase, alpha subunit RD08_RS00190 IPR008909 DALR anticodon binding RD08_RS00190 IPR015944 Glycine-tRNA ligase, beta subunit RD08_RS00195 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase RD08_RS00195 IPR006543 Histidinol-phosphate phosphatase RD08_RS00195 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RD08_RS00195 IPR023214 HAD-like domain RD08_RS00200 IPR002123 Phospholipid/glycerol acyltransferase RD08_RS00205 IPR002725 Protein of unknown function DUF45 RD08_RS00210 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD08_RS00210 IPR004361 Glyoxalase I RD08_RS00210 IPR018146 Glyoxalase I, conserved site RD08_RS00210 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS00215 IPR000181 Formylmethionine deformylase RD08_RS00215 IPR023635 Peptide deformylase RD08_RS00225 IPR001584 Integrase, catalytic core RD08_RS00225 IPR009057 Homeodomain-like RD08_RS00225 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00225 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00225 IPR012337 Ribonuclease H-like domain RD08_RS00225 IPR024967 DNA-binding domain, IS481-type RD08_RS00230 IPR001584 Integrase, catalytic core RD08_RS00230 IPR009057 Homeodomain-like RD08_RS00230 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00230 IPR012337 Ribonuclease H-like domain RD08_RS00230 IPR024967 DNA-binding domain, IS481-type RD08_RS00235 IPR001584 Integrase, catalytic core RD08_RS00235 IPR009057 Homeodomain-like RD08_RS00235 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00235 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00235 IPR012337 Ribonuclease H-like domain RD08_RS00235 IPR024967 DNA-binding domain, IS481-type RD08_RS00240 IPR019043 Restriction endonuclease, type II, HindIII RD08_RS00250 IPR002817 Thiamine biosynthesis protein ThiC RD08_RS00250 IPR025747 ThiC-associated domain RD08_RS00255 IPR015590 Aldehyde dehydrogenase domain RD08_RS00255 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS00255 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS00255 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS00255 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS00255 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD08_RS00260 IPR004113 FAD-linked oxidase, C-terminal RD08_RS00260 IPR006094 FAD linked oxidase, N-terminal RD08_RS00260 IPR016164 FAD-linked oxidase-like, C-terminal RD08_RS00260 IPR016166 FAD-binding, type 2 RD08_RS00260 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS00260 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS00260 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD08_RS00265 IPR000524 Transcription regulator HTH, GntR RD08_RS00265 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS00265 IPR011711 GntR, C-terminal RD08_RS00265 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00270 IPR001584 Integrase, catalytic core RD08_RS00270 IPR009057 Homeodomain-like RD08_RS00270 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00270 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00270 IPR012337 Ribonuclease H-like domain RD08_RS00270 IPR024967 DNA-binding domain, IS481-type RD08_RS00275 IPR011042 Six-bladed beta-propeller, TolB-like RD08_RS00275 IPR011217 Streptogramin lyase RD08_RS00280 IPR016181 Acyl-CoA N-acyltransferase RD08_RS00285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS00285 IPR018317 Queuosine biosynthesis protein QueC RD08_RS00290 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS00290 IPR018129 Phosphoenolpyruvate carboxylase, active site RD08_RS00290 IPR021135 Phosphoenolpyruvate carboxylase RD08_RS00290 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type RD08_RS00290 IPR033129 RD08_RS00290 RD08_RS00295 IPR000209 Peptidase S8/S53 domain RD08_RS00295 IPR005546 Autotransporter beta-domain RD08_RS00295 IPR012332 P22 tailspike C-terminal domain-like RD08_RS00295 IPR013425 Autotransporter-associated beta strand repeat RD08_RS00295 IPR015500 Peptidase S8, subtilisin-related RD08_RS00295 IPR023828 Peptidase S8, subtilisin, Ser-active site RD08_RS00300 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD08_RS00300 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD08_RS00300 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS00300 IPR013328 Dehydrogenase, multihelical RD08_RS00300 IPR016040 NAD(P)-binding domain RD08_RS00300 IPR022694 3-hydroxyacyl-CoA dehydrogenase RD08_RS00305 IPR006160 Short chain fatty acid transporter AtoE RD08_RS00310 IPR002347 Glucose/ribitol dehydrogenase RD08_RS00310 IPR016040 NAD(P)-binding domain RD08_RS00310 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS00315 IPR005471 Transcription regulator IclR, N-terminal RD08_RS00315 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00315 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RD08_RS00315 IPR014757 Transcription regulator IclR, C-terminal RD08_RS00315 IPR029016 GAF domain-like RD08_RS00320 IPR004163 Coenzyme A transferase binding site RD08_RS00320 IPR004165 Coenzyme A transferase family I RD08_RS00320 IPR012792 3-oxoacid CoA-transferase, subunit A RD08_RS00325 IPR004165 Coenzyme A transferase family I RD08_RS00325 IPR012791 3-oxoacid CoA-transferase, subunit B RD08_RS00330 IPR003464 Muconolactone delta-isomerase RD08_RS00330 IPR011008 Dimeric alpha-beta barrel RD08_RS00330 IPR026029 Muconolactone isomerase domain RD08_RS00335 IPR005545 YCII-related RD08_RS00335 IPR011008 Dimeric alpha-beta barrel RD08_RS00340 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS00340 IPR026968 3-oxoadipate enol-lactonase 1/2 RD08_RS00340 IPR029058 Alpha/Beta hydrolase fold RD08_RS00345 IPR007325 Kynurenine formamidase RD08_RS00350 IPR011690 Phosphate-starvation-induced PsiF repeat RD08_RS00355 IPR001584 Integrase, catalytic core RD08_RS00355 IPR009057 Homeodomain-like RD08_RS00355 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00355 IPR012337 Ribonuclease H-like domain RD08_RS00355 IPR024967 DNA-binding domain, IS481-type RD08_RS00360 IPR001753 Crotonase superfamily RD08_RS00360 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS00360 IPR029045 ClpP/crotonase-like domain RD08_RS00365 IPR005064 Bordetella uptake gene RD08_RS00370 IPR003673 CoA-transferase family III RD08_RS00370 IPR023606 CoA-transferase family III domain RD08_RS00375 IPR000524 Transcription regulator HTH, GntR RD08_RS00375 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS00375 IPR011711 GntR, C-terminal RD08_RS00375 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00380 IPR003437 Glycine cleavage system P protein, homodimeric RD08_RS00380 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS00380 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS00380 IPR020580 Glycine cleavage system P-protein, N-terminal RD08_RS00380 IPR020581 Glycine cleavage system P protein RD08_RS00385 IPR002930 Glycine cleavage system H-protein RD08_RS00385 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD08_RS00385 IPR011053 Single hybrid motif RD08_RS00385 IPR017453 Glycine cleavage system H-protein, subgroup RD08_RS00390 IPR006222 Glycine cleavage T-protein, N-terminal RD08_RS00390 IPR006223 Glycine cleavage system T protein RD08_RS00390 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RD08_RS00390 IPR022903 Glycine cleavage system T protein, bacteria RD08_RS00390 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD08_RS00390 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA RD08_RS00390 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RD08_RS00395 IPR003689 Zinc/iron permease RD08_RS00400 IPR001189 Manganese/iron superoxide dismutase RD08_RS00400 IPR019831 Manganese/iron superoxide dismutase, N-terminal RD08_RS00400 IPR019832 Manganese/iron superoxide dismutase, C-terminal RD08_RS00400 IPR019833 Manganese/iron superoxide dismutase, binding site RD08_RS00405 IPR001584 Integrase, catalytic core RD08_RS00405 IPR009057 Homeodomain-like RD08_RS00405 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00405 IPR012337 Ribonuclease H-like domain RD08_RS00405 IPR024967 DNA-binding domain, IS481-type RD08_RS00410 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RD08_RS00410 IPR023166 HI0933 insert-like domain RD08_RS00410 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS00415 IPR000310 Orn/Lys/Arg decarboxylase, major domain RD08_RS00415 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal RD08_RS00415 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal RD08_RS00415 IPR011193 Ornithine/lysine/arginine decarboxylase RD08_RS00415 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS00415 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS00415 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS00425 IPR000182 GNAT domain RD08_RS00425 IPR016181 Acyl-CoA N-acyltransferase RD08_RS00430 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD08_RS00430 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS00435 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD08_RS00435 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS00440 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RD08_RS00440 IPR011962 Deoxycytidine triphosphate deaminase RD08_RS00440 IPR029054 dUTPase-like RD08_RS00445 IPR007452 Protein of unknown function DUF490 RD08_RS00450 IPR000184 Bacterial surface antigen (D15) RD08_RS00455 IPR000808 Mrp, conserved site RD08_RS00455 IPR002744 Domain of unknown function DUF59 RD08_RS00455 IPR019591 Mrp/NBP35 ATP-binding protein RD08_RS00455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00465 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD08_RS00465 IPR002547 tRNA-binding domain RD08_RS00465 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal RD08_RS00465 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD08_RS00465 IPR012340 Nucleic acid-binding, OB-fold RD08_RS00465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS00465 IPR014758 Methionyl-tRNA synthetase RD08_RS00465 IPR015413 Methionyl/Leucyl tRNA synthetase RD08_RS00465 IPR023458 Methionine-tRNA ligase, type 1 RD08_RS00465 IPR029038 Methionyl-tRNA synthetase, Zn-domain RD08_RS00470 IPR001763 Rhodanese-like domain RD08_RS00470 IPR020936 Uncharacterised protein family UPF0176 RD08_RS00475 IPR005184 Domain of unknown function DUF306, Meta/HslJ RD08_RS00475 IPR025485 Domain of unknown function DUF4377 RD08_RS00480 IPR005184 Domain of unknown function DUF306, Meta/HslJ RD08_RS00490 IPR001584 Integrase, catalytic core RD08_RS00490 IPR009057 Homeodomain-like RD08_RS00490 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00490 IPR012337 Ribonuclease H-like domain RD08_RS00490 IPR024967 DNA-binding domain, IS481-type RD08_RS00495 IPR002024 Bacterioferritin RD08_RS00495 IPR008331 Ferritin/DPS protein domain RD08_RS00495 IPR009078 Ferritin-like superfamily RD08_RS00495 IPR012347 Ferritin-related RD08_RS00505 IPR000795 Elongation factor, GTP-binding domain RD08_RS00505 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD08_RS00505 IPR004548 Peptide chain release factor 3 RD08_RS00505 IPR005225 Small GTP-binding protein domain RD08_RS00505 IPR009000 Translation protein, beta-barrel domain RD08_RS00505 IPR009022 Elongation factor G, III-V domain RD08_RS00505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00505 IPR031157 RD08_RS00505 RD08_RS00505 IPR032090 RD08_RS00505 RD08_RS00510 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD08_RS00515 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD08_RS00515 IPR001650 Helicase, C-terminal RD08_RS00515 IPR011545 DEAD/DEAH box helicase domain RD08_RS00515 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00515 IPR028622 ATP-dependent RNA helicase RhlE RD08_RS00520 IPR007156 LemA RD08_RS00520 IPR023353 LemA-like domain RD08_RS00525 IPR007621 TPM domain RD08_RS00530 IPR003439 ABC transporter-like RD08_RS00530 IPR003593 AAA+ ATPase domain RD08_RS00530 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS00530 IPR017871 ABC transporter, conserved site RD08_RS00530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00535 IPR001584 Integrase, catalytic core RD08_RS00535 IPR009057 Homeodomain-like RD08_RS00535 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00535 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00535 IPR012337 Ribonuclease H-like domain RD08_RS00535 IPR024967 DNA-binding domain, IS481-type RD08_RS00540 IPR009078 Ferritin-like superfamily RD08_RS00540 IPR012348 Ribonucleotide reductase-related RD08_RS00545 IPR004147 UbiB domain RD08_RS00545 IPR010232 Probable protein kinase UbiB RD08_RS00545 IPR011009 Protein kinase-like domain RD08_RS00550 IPR003033 SCP2 sterol-binding domain RD08_RS00555 IPR007379 Tim44-like domain RD08_RS00555 IPR032710 RD08_RS00555 RD08_RS00560 IPR004033 UbiE/COQ5 methyltransferase RD08_RS00560 IPR023576 UbiE/COQ5 methyltransferase, conserved site RD08_RS00560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS00565 IPR001789 Signal transduction response regulator, receiver domain RD08_RS00565 IPR001867 Signal transduction response regulator, C-terminal RD08_RS00565 IPR011006 CheY-like superfamily RD08_RS00565 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB RD08_RS00565 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00565 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS00570 IPR000014 PAS domain RD08_RS00570 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS00570 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS00570 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS00570 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR RD08_RS00570 IPR021766 Protein of unknown function DUF3329 RD08_RS00575 IPR001789 Signal transduction response regulator, receiver domain RD08_RS00575 IPR001867 Signal transduction response regulator, C-terminal RD08_RS00575 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response RD08_RS00575 IPR011006 CheY-like superfamily RD08_RS00575 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00580 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS00580 IPR003660 HAMP linker domain RD08_RS00580 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS00580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS00580 IPR006290 Heavy metal sensor kinase RD08_RS00585 IPR007332 Protein of unknown function DUF411 RD08_RS00590 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD08_RS00590 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD08_RS00590 IPR016040 NAD(P)-binding domain RD08_RS00590 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 RD08_RS00590 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD08_RS00590 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD08_RS00595 IPR000847 Transcription regulator HTH, LysR RD08_RS00595 IPR005119 LysR, substrate-binding RD08_RS00595 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00600 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD08_RS00600 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS00605 IPR003833 Allophanate hydrolase subunit 1 RD08_RS00605 IPR010016 Sensor histidine kinase inhibitor, KipI family RD08_RS00605 IPR024946 Arginine repressor C-terminal-like domain RD08_RS00605 IPR029000 Cyclophilin-like domain RD08_RS00610 IPR003778 Allophanate hydrolase subunit 2 RD08_RS00610 IPR029000 Cyclophilin-like domain RD08_RS00615 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RD08_RS00615 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD08_RS00620 IPR005471 Transcription regulator IclR, N-terminal RD08_RS00620 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00620 IPR014757 Transcription regulator IclR, C-terminal RD08_RS00620 IPR029016 GAF domain-like RD08_RS00625 IPR005064 Bordetella uptake gene RD08_RS00630 IPR002938 Monooxygenase, FAD-binding RD08_RS00630 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS00635 IPR002938 Monooxygenase, FAD-binding RD08_RS00635 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS00640 IPR001753 Crotonase superfamily RD08_RS00640 IPR029045 ClpP/crotonase-like domain RD08_RS00645 IPR002168 Lipase, GDXG, active site RD08_RS00645 IPR013094 Alpha/beta hydrolase fold-3 RD08_RS00645 IPR029058 Alpha/Beta hydrolase fold RD08_RS00650 IPR003673 CoA-transferase family III RD08_RS00650 IPR023606 CoA-transferase family III domain RD08_RS00655 IPR000524 Transcription regulator HTH, GntR RD08_RS00655 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS00655 IPR011711 GntR, C-terminal RD08_RS00655 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00660 IPR004017 Cysteine-rich domain RD08_RS00660 IPR004113 FAD-linked oxidase, C-terminal RD08_RS00660 IPR006094 FAD linked oxidase, N-terminal RD08_RS00660 IPR009051 Alpha-helical ferredoxin RD08_RS00660 IPR016164 FAD-linked oxidase-like, C-terminal RD08_RS00660 IPR016166 FAD-binding, type 2 RD08_RS00660 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS00660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD08_RS00660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS00660 IPR021817 Protein of unknown function DUF3400 RD08_RS00660 IPR022153 Protein of unknown function DUF3683 RD08_RS00670 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RD08_RS00670 IPR001721 ACT-like domain RD08_RS00670 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD08_RS00670 IPR005787 Threonine dehydratase, biosynthetic RD08_RS00675 IPR023614 Porin domain RD08_RS00680 IPR001584 Integrase, catalytic core RD08_RS00680 IPR009057 Homeodomain-like RD08_RS00680 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00680 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00680 IPR012337 Ribonuclease H-like domain RD08_RS00680 IPR024967 DNA-binding domain, IS481-type RD08_RS00690 IPR000847 Transcription regulator HTH, LysR RD08_RS00690 IPR005119 LysR, substrate-binding RD08_RS00690 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00695 IPR007419 BFD-like [2Fe-2S]-binding domain RD08_RS00700 IPR000394 RNA polymerase sigma factor 54 RD08_RS00700 IPR007046 RNA polymerase sigma factor 54, core-binding RD08_RS00700 IPR007634 RNA polymerase sigma factor 54, DNA-binding RD08_RS00710 IPR000891 Pyruvate carboxyltransferase RD08_RS00710 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RD08_RS00710 IPR005668 2-isopropylmalate synthase RD08_RS00710 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RD08_RS00710 IPR013785 Aldolase-type TIM barrel RD08_RS00715 IPR000120 Amidase RD08_RS00715 IPR023631 Amidase signature domain RD08_RS00725 IPR028082 Periplasmic binding protein-like I RD08_RS00740 IPR000515 MetI-like domain RD08_RS00745 IPR003439 ABC transporter-like RD08_RS00745 IPR003593 AAA+ ATPase domain RD08_RS00745 IPR017871 ABC transporter, conserved site RD08_RS00745 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00750 IPR001584 Integrase, catalytic core RD08_RS00750 IPR009057 Homeodomain-like RD08_RS00750 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00750 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00750 IPR012337 Ribonuclease H-like domain RD08_RS00750 IPR024967 DNA-binding domain, IS481-type RD08_RS00755 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD08_RS00755 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RD08_RS00755 IPR029052 Metallo-dependent phosphatase-like RD08_RS00760 IPR003439 ABC transporter-like RD08_RS00760 IPR003593 AAA+ ATPase domain RD08_RS00760 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS00760 IPR012340 Nucleic acid-binding, OB-fold RD08_RS00760 IPR013611 Transport-associated OB, type 2 RD08_RS00760 IPR017871 ABC transporter, conserved site RD08_RS00760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00770 IPR000515 MetI-like domain RD08_RS00775 IPR000515 MetI-like domain RD08_RS00780 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS00780 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS00790 IPR014991 Protein of unknown function DUF1840 RD08_RS00795 IPR001278 Arginine-tRNA ligase RD08_RS00795 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD08_RS00795 IPR005148 Arginyl tRNA synthetase N-terminal domain RD08_RS00795 IPR008909 DALR anticodon binding RD08_RS00795 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD08_RS00795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS00805 IPR001853 DSBA-like thioredoxin domain RD08_RS00805 IPR012336 Thioredoxin-like fold RD08_RS00805 IPR013766 Thioredoxin domain RD08_RS00805 IPR017937 Thioredoxin, conserved site RD08_RS00805 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RD08_RS00810 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD08_RS00810 IPR006233 Cystathionine beta-lyase, bacterial RD08_RS00810 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS00810 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS00810 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS00820 IPR001584 Integrase, catalytic core RD08_RS00820 IPR009057 Homeodomain-like RD08_RS00820 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00820 IPR012337 Ribonuclease H-like domain RD08_RS00820 IPR024967 DNA-binding domain, IS481-type RD08_RS00825 IPR005888 dTDP-glucose 4,6-dehydratase RD08_RS00825 IPR016040 NAD(P)-binding domain RD08_RS00825 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS00830 IPR005913 dTDP-4-dehydrorhamnose reductase RD08_RS00830 IPR016040 NAD(P)-binding domain RD08_RS00830 IPR029903 RD08_RS00830 RD08_RS00835 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related RD08_RS00835 IPR011051 RmlC-like cupin domain RD08_RS00835 IPR014710 RmlC-like jelly roll fold RD08_RS00840 IPR003698 Lipoyl synthase RD08_RS00840 IPR006638 Elongator protein 3/MiaB/NifB RD08_RS00840 IPR007197 Radical SAM RD08_RS00840 IPR013785 Aldolase-type TIM barrel RD08_RS00840 IPR031691 RD08_RS00840 RD08_RS00845 IPR000544 Octanoyltransferase RD08_RS00845 IPR004143 Biotin/lipoate A/B protein ligase RD08_RS00845 IPR020605 Octanoyltransferase, conserved site RD08_RS00850 IPR007454 Uncharacterised protein family UPF0250 RD08_RS00850 IPR027471 YbeD-like domain RD08_RS00855 IPR001544 Aminotransferase, class IV RD08_RS00860 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RD08_RS00860 IPR012338 Beta-lactamase/transpeptidase-like RD08_RS00860 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RD08_RS00860 IPR015956 Penicillin-binding protein-associated RD08_RS00860 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RD08_RS00865 IPR029058 Alpha/Beta hydrolase fold RD08_RS00870 IPR005586 Protein of unknown function DUF330 RD08_RS00885 IPR003439 ABC transporter-like RD08_RS00885 IPR003593 AAA+ ATPase domain RD08_RS00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00890 IPR003453 Permease domain RD08_RS00890 IPR030802 RD08_RS00890 RD08_RS00895 IPR003142 Biotin protein ligase, C-terminal RD08_RS00895 IPR004143 Biotin/lipoate A/B protein ligase RD08_RS00895 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RD08_RS00895 IPR008988 Transcriptional repressor, C-terminal RD08_RS00900 IPR004619 Type III pantothenate kinase RD08_RS00910 IPR001296 Glycosyl transferase, family 1 RD08_RS00910 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RD08_RS00915 IPR002201 Glycosyl transferase, family 9 RD08_RS00915 IPR011908 Lipopolysaccharide heptosyltransferase I RD08_RS00920 IPR000683 Oxidoreductase, N-terminal RD08_RS00920 IPR004104 Oxidoreductase, C-terminal RD08_RS00920 IPR016040 NAD(P)-binding domain RD08_RS00925 IPR001451 Bacterial transferase hexapeptide repeat RD08_RS00925 IPR011004 Trimeric LpxA-like RD08_RS00930 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RD08_RS00930 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS00930 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS00930 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS00935 IPR003331 UDP-N-acetylglucosamine 2-epimerase RD08_RS00935 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type RD08_RS00940 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS00945 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RD08_RS00945 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS00945 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS00945 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS00950 IPR003362 Bacterial sugar transferase RD08_RS00955 IPR001296 Glycosyl transferase, family 1 RD08_RS00955 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS00960 IPR021260 Protein of unknown function DUF2837 RD08_RS00970 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RD08_RS00970 IPR016040 NAD(P)-binding domain RD08_RS00975 IPR001584 Integrase, catalytic core RD08_RS00975 IPR009057 Homeodomain-like RD08_RS00975 IPR012337 Ribonuclease H-like domain RD08_RS00975 IPR024967 DNA-binding domain, IS481-type RD08_RS00980 IPR001584 Integrase, catalytic core RD08_RS00980 IPR009057 Homeodomain-like RD08_RS00980 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS00980 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS00980 IPR012337 Ribonuclease H-like domain RD08_RS00980 IPR024967 DNA-binding domain, IS481-type RD08_RS00985 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD08_RS00985 IPR003593 AAA+ ATPase domain RD08_RS00985 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RD08_RS00985 IPR004780 Signal recognition particle protein Ffh RD08_RS00985 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RD08_RS00985 IPR022941 Signal recognition particle, SRP54 subunit RD08_RS00985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS00990 IPR002541 Cytochrome c assembly protein RD08_RS00995 IPR001781 Zinc finger, LIM-type RD08_RS01000 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RD08_RS01005 IPR004045 Glutathione S-transferase, N-terminal RD08_RS01005 IPR004046 Glutathione S-transferase, C-terminal RD08_RS01005 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS01005 IPR012336 Thioredoxin-like fold RD08_RS01010 IPR001404 Heat shock protein Hsp90 family RD08_RS01010 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS01010 IPR019805 Heat shock protein Hsp90, conserved site RD08_RS01010 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS01010 IPR020575 Heat shock protein Hsp90, N-terminal RD08_RS01020 IPR001584 Integrase, catalytic core RD08_RS01020 IPR012337 Ribonuclease H-like domain RD08_RS01025 IPR009534 Protein of unknown function DUF1153 RD08_RS01025 IPR010921 Trp repressor/replication initiator RD08_RS01025 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01030 IPR001584 Integrase, catalytic core RD08_RS01030 IPR009057 Homeodomain-like RD08_RS01030 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01030 IPR012337 Ribonuclease H-like domain RD08_RS01030 IPR024967 DNA-binding domain, IS481-type RD08_RS01035 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD08_RS01035 IPR032710 RD08_RS01035 RD08_RS01040 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS01050 IPR004681 TRAP transporter permease protein RD08_RS01050 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS01055 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS01055 IPR001221 Phenol hydroxylase reductase RD08_RS01055 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS01055 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS01055 IPR008333 Oxidoreductase, FAD-binding domain RD08_RS01055 IPR012675 Beta-grasp domain RD08_RS01055 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS01060 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS01065 IPR002818 ThiJ/PfpI RD08_RS01065 IPR006286 Peptidase C56, PfpI RD08_RS01065 IPR029062 Class I glutamine amidotransferase-like RD08_RS01070 IPR005064 Bordetella uptake gene RD08_RS01080 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01085 IPR012893 HipA-like, C-terminal RD08_RS01085 IPR012894 HipA, N-terminal subdomain 2 RD08_RS01085 IPR017508 HipA, N-terminal subdomain 1 RD08_RS01095 IPR001584 Integrase, catalytic core RD08_RS01095 IPR009057 Homeodomain-like RD08_RS01095 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01095 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01095 IPR012337 Ribonuclease H-like domain RD08_RS01095 IPR024967 DNA-binding domain, IS481-type RD08_RS01100 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS01105 IPR000515 MetI-like domain RD08_RS01105 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS01105 IPR030202 RD08_RS01105 RD08_RS01110 IPR000515 MetI-like domain RD08_RS01110 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS01110 IPR030205 RD08_RS01110 RD08_RS01115 IPR003439 ABC transporter-like RD08_RS01115 IPR003593 AAA+ ATPase domain RD08_RS01115 IPR017871 ABC transporter, conserved site RD08_RS01115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01115 IPR030206 RD08_RS01115 RD08_RS01120 IPR001920 Asp/Glu racemase RD08_RS01120 IPR004380 Aspartate racemase RD08_RS01120 IPR015942 Asp/Glu/hydantoin racemase RD08_RS01120 IPR018187 Asp/Glu racemase, active site RD08_RS01130 IPR011701 Major facilitator superfamily RD08_RS01130 IPR020846 Major facilitator superfamily domain RD08_RS01135 IPR001584 Integrase, catalytic core RD08_RS01135 IPR009057 Homeodomain-like RD08_RS01135 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01135 IPR012337 Ribonuclease H-like domain RD08_RS01135 IPR024967 DNA-binding domain, IS481-type RD08_RS01140 IPR010743 Methionine biosynthesis MetW RD08_RS01140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS01145 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS01145 IPR008220 Homoserine acetyltransferase RD08_RS01145 IPR029058 Alpha/Beta hydrolase fold RD08_RS01150 IPR003767 Malate/L-lactate dehydrogenase RD08_RS01155 IPR004776 Auxin efflux carrier RD08_RS01160 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS01160 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01160 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS01170 IPR022742 Putative lysophospholipase RD08_RS01170 IPR029058 Alpha/Beta hydrolase fold RD08_RS01175 IPR001584 Integrase, catalytic core RD08_RS01175 IPR009057 Homeodomain-like RD08_RS01175 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01175 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01175 IPR012337 Ribonuclease H-like domain RD08_RS01175 IPR024967 DNA-binding domain, IS481-type RD08_RS01180 IPR002347 Glucose/ribitol dehydrogenase RD08_RS01180 IPR016040 NAD(P)-binding domain RD08_RS01180 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS01190 IPR003779 Carboxymuconolactone decarboxylase-like RD08_RS01190 IPR029032 AhpD-like RD08_RS01195 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD08_RS01195 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS01195 IPR013328 Dehydrogenase, multihelical RD08_RS01195 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD08_RS01195 IPR016040 NAD(P)-binding domain RD08_RS01195 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD08_RS01200 IPR000524 Transcription regulator HTH, GntR RD08_RS01200 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS01200 IPR011711 GntR, C-terminal RD08_RS01200 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01205 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS01210 IPR004681 TRAP transporter permease protein RD08_RS01210 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS01210 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS01220 IPR005064 Bordetella uptake gene RD08_RS01225 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RD08_RS01230 IPR002646 Poly A polymerase, head domain RD08_RS01230 IPR010206 Poly(A) polymerase I RD08_RS01230 IPR025866 Polymerase A arginine-rich C-terminal domain RD08_RS01230 IPR032828 RD08_RS01230 RD08_RS01235 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like RD08_RS01235 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RD08_RS01235 IPR023214 HAD-like domain RD08_RS01240 IPR003593 AAA+ ATPase domain RD08_RS01240 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RD08_RS01240 IPR017788 DnaA regulatory inactivator Hda RD08_RS01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01245 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RD08_RS01245 IPR010918 AIR synthase-related protein, C-terminal domain RD08_RS01245 IPR016188 PurM, N-terminal-like RD08_RS01250 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase RD08_RS01250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01255 IPR002099 DNA mismatch repair protein family RD08_RS01255 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS01255 IPR013507 DNA mismatch repair protein, C-terminal RD08_RS01255 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS01255 IPR014762 DNA mismatch repair, conserved site RD08_RS01255 IPR014790 MutL, C-terminal, dimerisation RD08_RS01255 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS01255 IPR020667 DNA mismatch repair protein, MutL RD08_RS01260 IPR032816 RD08_RS01260 RD08_RS01260 IPR032818 RD08_RS01260 RD08_RS01265 IPR002508 Cell wall hydrolase/autolysin, catalytic RD08_RS01265 IPR021731 AMIN domain RD08_RS01270 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RD08_RS01270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01275 IPR000362 Fumarate lyase family RD08_RS01275 IPR005677 Fumarate hydratase, class II RD08_RS01275 IPR008948 L-Aspartase-like RD08_RS01275 IPR018951 Fumarase C, C-terminal RD08_RS01275 IPR020557 Fumarate lyase, conserved site RD08_RS01275 IPR022761 Fumarate lyase, N-terminal RD08_RS01275 IPR024083 Fumarase/histidase, N-terminal RD08_RS01280 IPR004776 Auxin efflux carrier RD08_RS01285 IPR005064 Bordetella uptake gene RD08_RS01290 IPR000847 Transcription regulator HTH, LysR RD08_RS01290 IPR005119 LysR, substrate-binding RD08_RS01290 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01295 IPR000101 Gamma-glutamyltranspeptidase RD08_RS01295 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS01300 IPR003673 CoA-transferase family III RD08_RS01300 IPR023606 CoA-transferase family III domain RD08_RS01305 IPR005064 Bordetella uptake gene RD08_RS01310 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS01310 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS01315 IPR001584 Integrase, catalytic core RD08_RS01315 IPR009057 Homeodomain-like RD08_RS01315 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01315 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01315 IPR012337 Ribonuclease H-like domain RD08_RS01315 IPR024967 DNA-binding domain, IS481-type RD08_RS01320 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS01320 IPR010917 TonB-dependent receptor, conserved site RD08_RS01325 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01325 IPR026282 DNA-binding protein, MJ1563 type RD08_RS01330 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RD08_RS01335 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RD08_RS01340 IPR011724 Cyd operon protein YbgT RD08_RS01340 IPR012994 Membrane bound YbgT-like RD08_RS01345 IPR003439 ABC transporter-like RD08_RS01345 IPR003593 AAA+ ATPase domain RD08_RS01345 IPR011527 ABC transporter type 1, transmembrane domain RD08_RS01345 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RD08_RS01345 IPR017871 ABC transporter, conserved site RD08_RS01345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01350 IPR003439 ABC transporter-like RD08_RS01350 IPR003593 AAA+ ATPase domain RD08_RS01350 IPR011527 ABC transporter type 1, transmembrane domain RD08_RS01350 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC RD08_RS01350 IPR017871 ABC transporter, conserved site RD08_RS01350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01355 IPR000836 Phosphoribosyltransferase domain RD08_RS01355 IPR005764 Adenine phosphoribosyl transferase RD08_RS01355 IPR029057 Phosphoribosyltransferase-like RD08_RS01365 IPR025421 Protein of unknown function DUF4148 RD08_RS01370 IPR002299 Porin, Neisseria sp. type RD08_RS01370 IPR023614 Porin domain RD08_RS01375 IPR001584 Integrase, catalytic core RD08_RS01375 IPR009057 Homeodomain-like RD08_RS01375 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01375 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01375 IPR012337 Ribonuclease H-like domain RD08_RS01375 IPR024967 DNA-binding domain, IS481-type RD08_RS01380 IPR025319 Domain of unknown function DUF4224 RD08_RS01385 IPR013762 Integrase-like, catalytic core RD08_RS01395 IPR007481 Stringent starvation protein B RD08_RS01400 IPR004045 Glutathione S-transferase, N-terminal RD08_RS01400 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS01400 IPR012336 Thioredoxin-like fold RD08_RS01405 IPR002326 Cytochrome c1 RD08_RS01405 IPR009056 Cytochrome c-like domain RD08_RS01410 IPR005798 Cytochrome b/b6, C-terminal RD08_RS01410 IPR016174 Di-haem cytochrome, transmembrane RD08_RS01410 IPR027387 Cytochrome b/b6-like domain RD08_RS01415 IPR005805 Rieske iron-sulphur protein, C-terminal RD08_RS01415 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit RD08_RS01415 IPR014349 Rieske iron-sulphur protein RD08_RS01415 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS01420 IPR001185 Large-conductance mechanosensitive channel RD08_RS01425 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RD08_RS01430 IPR001478 PDZ domain RD08_RS01430 IPR001940 Peptidase S1C RD08_RS01430 IPR009003 Trypsin-like cysteine/serine peptidase domain RD08_RS01435 IPR001584 Integrase, catalytic core RD08_RS01435 IPR009057 Homeodomain-like RD08_RS01435 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01435 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01435 IPR012337 Ribonuclease H-like domain RD08_RS01435 IPR024967 DNA-binding domain, IS481-type RD08_RS01440 IPR007396 Transcriptional regulator PAI 2-type RD08_RS01440 IPR012349 FMN-binding split barrel RD08_RS01445 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD08_RS01445 IPR016040 NAD(P)-binding domain RD08_RS01450 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS01450 IPR030678 RD08_RS01450 RD08_RS01455 IPR002168 Lipase, GDXG, active site RD08_RS01455 IPR013094 Alpha/beta hydrolase fold-3 RD08_RS01455 IPR029058 Alpha/Beta hydrolase fold RD08_RS01460 IPR003313 AraC-type arabinose-binding/dimerisation domain RD08_RS01460 IPR009057 Homeodomain-like RD08_RS01460 IPR011051 RmlC-like cupin domain RD08_RS01460 IPR014710 RmlC-like jelly roll fold RD08_RS01460 IPR018060 DNA binding HTH domain, AraC-type RD08_RS01460 IPR020449 Transcription regulator HTH, AraC- type RD08_RS01465 IPR000891 Pyruvate carboxyltransferase RD08_RS01465 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RD08_RS01465 IPR013785 Aldolase-type TIM barrel RD08_RS01470 IPR003313 AraC-type arabinose-binding/dimerisation domain RD08_RS01470 IPR009057 Homeodomain-like RD08_RS01470 IPR011051 RmlC-like cupin domain RD08_RS01470 IPR014710 RmlC-like jelly roll fold RD08_RS01470 IPR018060 DNA binding HTH domain, AraC-type RD08_RS01470 IPR020449 Transcription regulator HTH, AraC- type RD08_RS01475 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RD08_RS01475 IPR004404 Dihydroxy-acid dehydratase RD08_RS01475 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS01475 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RD08_RS01480 IPR011701 Major facilitator superfamily RD08_RS01480 IPR020846 Major facilitator superfamily domain RD08_RS01485 IPR000847 Transcription regulator HTH, LysR RD08_RS01485 IPR005119 LysR, substrate-binding RD08_RS01485 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01495 IPR010708 5'(3')-deoxyribonucleotidase RD08_RS01495 IPR023214 HAD-like domain RD08_RS01500 IPR001584 Integrase, catalytic core RD08_RS01500 IPR009057 Homeodomain-like RD08_RS01500 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01500 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01500 IPR012337 Ribonuclease H-like domain RD08_RS01500 IPR024967 DNA-binding domain, IS481-type RD08_RS01510 IPR001584 Integrase, catalytic core RD08_RS01510 IPR009057 Homeodomain-like RD08_RS01510 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01510 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01510 IPR012337 Ribonuclease H-like domain RD08_RS01510 IPR024967 DNA-binding domain, IS481-type RD08_RS01520 IPR000835 MarR-type HTH domain RD08_RS01520 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01520 IPR023187 Transcriptional regulator MarR-type, conserved site RD08_RS01525 IPR013094 Alpha/beta hydrolase fold-3 RD08_RS01525 IPR029058 Alpha/Beta hydrolase fold RD08_RS01530 IPR028081 Leucine-binding protein domain RD08_RS01530 IPR028082 Periplasmic binding protein-like I RD08_RS01535 IPR001851 ABC transporter, permease RD08_RS01540 IPR001851 ABC transporter, permease RD08_RS01545 IPR003439 ABC transporter-like RD08_RS01545 IPR003593 AAA+ ATPase domain RD08_RS01545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01545 IPR032823 RD08_RS01545 RD08_RS01550 IPR003439 ABC transporter-like RD08_RS01550 IPR003593 AAA+ ATPase domain RD08_RS01550 IPR017871 ABC transporter, conserved site RD08_RS01550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01565 IPR001753 Crotonase superfamily RD08_RS01565 IPR014748 Crontonase, C-terminal RD08_RS01565 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS01565 IPR029045 ClpP/crotonase-like domain RD08_RS01570 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS01570 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS01570 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS01570 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS01570 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS01575 IPR000873 AMP-dependent synthetase/ligase RD08_RS01575 IPR020845 AMP-binding, conserved site RD08_RS01575 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS01580 IPR029069 HotDog domain RD08_RS01585 IPR006175 YjgF/Yer057p/UK114 family RD08_RS01585 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS01590 IPR005646 Protein of unknown function DUF342 RD08_RS01595 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RD08_RS01595 IPR005814 Aminotransferase class-III RD08_RS01595 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS01595 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS01595 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS01600 IPR003733 Thiamine phosphate synthase RD08_RS01600 IPR013785 Aldolase-type TIM barrel RD08_RS01600 IPR022998 Thiamin phosphate synthase superfamily RD08_RS01605 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD08_RS01605 IPR029056 Ribokinase-like RD08_RS01610 IPR004039 Rubredoxin-type fold RD08_RS01610 IPR018527 Rubredoxin, iron-binding site RD08_RS01610 IPR024922 Rubredoxin RD08_RS01610 IPR024935 Rubredoxin domain RD08_RS01615 IPR003774 Protein of unknown function UPF0301 RD08_RS01620 IPR005227 Resolvase, holliday junction-type, YqgF-like RD08_RS01620 IPR006641 YqgF/RNase H-like domain RD08_RS01620 IPR012337 Ribonuclease H-like domain RD08_RS01625 IPR002082 Aspartate carbamoyltransferase RD08_RS01625 IPR006130 Aspartate/ornithine carbamoyltransferase RD08_RS01625 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD08_RS01625 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD08_RS01630 IPR006680 Amidohydrolase 1 RD08_RS01630 IPR011059 Metal-dependent hydrolase, composite domain RD08_RS01630 IPR032466 RD08_RS01630 RD08_RS01635 IPR002123 Phospholipid/glycerol acyltransferase RD08_RS01640 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) RD08_RS01640 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD08_RS01640 IPR029052 Metallo-dependent phosphatase-like RD08_RS01645 IPR005495 Permease YjgP/YjgQ, predicted RD08_RS01645 IPR030923 RD08_RS01645 RD08_RS01650 IPR001264 Glycosyl transferase, family 51 RD08_RS01650 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase RD08_RS01650 IPR023346 Lysozyme-like domain RD08_RS01655 IPR001584 Integrase, catalytic core RD08_RS01655 IPR009057 Homeodomain-like RD08_RS01655 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01655 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01655 IPR012337 Ribonuclease H-like domain RD08_RS01655 IPR024967 DNA-binding domain, IS481-type RD08_RS01660 IPR011008 Dimeric alpha-beta barrel RD08_RS01665 IPR000873 AMP-dependent synthetase/ligase RD08_RS01665 IPR020845 AMP-binding, conserved site RD08_RS01665 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS01670 IPR005064 Bordetella uptake gene RD08_RS01675 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD08_RS01675 IPR012340 Nucleic acid-binding, OB-fold RD08_RS01675 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD08_RS01680 IPR002155 Thiolase RD08_RS01680 IPR016039 Thiolase-like RD08_RS01685 IPR001279 Beta-lactamase-like RD08_RS01690 IPR005064 Bordetella uptake gene RD08_RS01695 IPR005119 LysR, substrate-binding RD08_RS01700 IPR021728 Protein of unknown function DUF3300 RD08_RS01705 IPR021556 Protein of unknown function DUF2950 RD08_RS01710 IPR000160 GGDEF domain RD08_RS01710 IPR029787 Nucleotide cyclase RD08_RS01715 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RD08_RS01715 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RD08_RS01715 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01715 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RD08_RS01720 IPR004574 Alkylated DNA repair protein AlkB RD08_RS01720 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RD08_RS01725 IPR018655 Protein of unknown function DUF2086 RD08_RS01730 IPR007553 Domain of unknown function DUF523 RD08_RS01735 IPR003439 ABC transporter-like RD08_RS01735 IPR003593 AAA+ ATPase domain RD08_RS01735 IPR017871 ABC transporter, conserved site RD08_RS01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS01740 IPR000522 ABC transporter, permease protein RD08_RS01740 IPR029022 ABC transporter, BtuC-like RD08_RS01745 IPR002491 ABC transporter periplasmic binding domain RD08_RS01750 IPR007845 Haemin-degrading HemS/ChuX domain RD08_RS01755 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS01755 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RD08_RS01755 IPR011276 TonB-dependent haem/haemoglobin receptor RD08_RS01755 IPR011662 Secretin/TonB, short N-terminal RD08_RS01755 IPR012910 TonB-dependent receptor, plug RD08_RS01760 IPR006860 FecR protein RD08_RS01760 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD08_RS01760 IPR032623 RD08_RS01760 RD08_RS01765 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS01765 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01765 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD08_RS01765 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS01765 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS01765 IPR014284 RNA polymerase sigma-70 like domain RD08_RS01775 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS01775 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS01775 IPR012675 Beta-grasp domain RD08_RS01785 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS01785 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS01785 IPR012675 Beta-grasp domain RD08_RS01790 IPR003462 Ornithine cyclodeaminase/mu-crystallin RD08_RS01790 IPR016040 NAD(P)-binding domain RD08_RS01790 IPR023401 Ornithine cyclodeaminase, N-terminal RD08_RS01795 IPR001584 Integrase, catalytic core RD08_RS01795 IPR009057 Homeodomain-like RD08_RS01795 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01795 IPR012337 Ribonuclease H-like domain RD08_RS01795 IPR024967 DNA-binding domain, IS481-type RD08_RS01800 IPR000524 Transcription regulator HTH, GntR RD08_RS01800 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS01800 IPR011711 GntR, C-terminal RD08_RS01800 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01805 IPR002781 Transmembrane protein TauE like RD08_RS01815 IPR016084 Haem oxygenase-like, multi-helical RD08_RS01815 IPR028201 PqqC-like protein RD08_RS01820 IPR015590 Aldehyde dehydrogenase domain RD08_RS01820 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS01820 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS01820 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS01820 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS01820 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD08_RS01825 IPR005624 Domain of unknown function DUF336 RD08_RS01830 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS01830 IPR001221 Phenol hydroxylase reductase RD08_RS01830 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS01830 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD08_RS01830 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS01830 IPR008333 Oxidoreductase, FAD-binding domain RD08_RS01830 IPR012675 Beta-grasp domain RD08_RS01830 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS01835 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS01840 IPR011045 Nitrous oxide reductase, N-terminal RD08_RS01840 IPR015943 WD40/YVTN repeat-like-containing domain RD08_RS01840 IPR019405 Lactonase, 7-bladed beta propeller RD08_RS01845 IPR001584 Integrase, catalytic core RD08_RS01845 IPR009057 Homeodomain-like RD08_RS01845 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01845 IPR012337 Ribonuclease H-like domain RD08_RS01845 IPR024967 DNA-binding domain, IS481-type RD08_RS01850 IPR006015 Universal stress protein A RD08_RS01850 IPR006016 UspA RD08_RS01850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS01855 IPR005115 Uncharacterised domain UPF0126 RD08_RS01860 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RD08_RS01860 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RD08_RS01860 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RD08_RS01860 IPR014362 Glutamate dehydrogenase RD08_RS01860 IPR016040 NAD(P)-binding domain RD08_RS01865 IPR004808 AP endonuclease 1 RD08_RS01865 IPR005135 Endonuclease/exonuclease/phosphatase RD08_RS01865 IPR020847 AP endonuclease 1, binding site RD08_RS01870 IPR000836 Phosphoribosyltransferase domain RD08_RS01870 IPR004467 Orotate phosphoribosyl transferase domain RD08_RS01870 IPR023031 Orotate phosphoribosyltransferase RD08_RS01870 IPR029057 Phosphoribosyltransferase-like RD08_RS01875 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RD08_RS01875 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RD08_RS01875 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RD08_RS01875 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RD08_RS01875 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RD08_RS01875 IPR018027 Asn/Gln amidotransferase RD08_RS01875 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RD08_RS01880 IPR000120 Amidase RD08_RS01880 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD08_RS01880 IPR020556 Amidase, conserved site RD08_RS01880 IPR023631 Amidase signature domain RD08_RS01885 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit RD08_RS01890 IPR004753 Cell shape determining protein MreB/Mrl RD08_RS01895 IPR007221 Rod shape-determining protein MreC RD08_RS01900 IPR007227 Cell shape-determining protein MreD RD08_RS01900 IPR026034 Cell shape-determining protein MreD, proteobacterial type RD08_RS01905 IPR001460 Penicillin-binding protein, transpeptidase RD08_RS01905 IPR005311 Penicillin-binding protein, dimerisation domain RD08_RS01905 IPR012338 Beta-lactamase/transpeptidase-like RD08_RS01905 IPR017790 Penicillin-binding protein 2 RD08_RS01910 IPR001182 Cell cycle protein FtsW/RodA RD08_RS01910 IPR011923 Rod shape-determining protein RodA RD08_RS01910 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RD08_RS01915 IPR003767 Malate/L-lactate dehydrogenase RD08_RS01920 IPR001898 Sodium/sulphate symporter RD08_RS01920 IPR030676 RD08_RS01920 RD08_RS01925 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS01925 IPR009057 Homeodomain-like RD08_RS01925 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS01925 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS01930 IPR006439 HAD hydrolase, subfamily IA RD08_RS01930 IPR010237 Pyrimidine 5-nucleotidase RD08_RS01930 IPR023214 HAD-like domain RD08_RS01935 IPR001048 Aspartate/glutamate/uridylate kinase RD08_RS01935 IPR001057 Glutamate/acetylglutamate kinase RD08_RS01935 IPR004662 Acetylglutamate kinase RD08_RS01940 IPR004872 Lipoprotein NlpA family RD08_RS01945 IPR012336 Thioredoxin-like fold RD08_RS01945 IPR013740 Redoxin RD08_RS01950 IPR007055 BON domain RD08_RS01950 IPR014004 Transport-associated and nodulation domain, bacteria RD08_RS01955 IPR001347 Sugar isomerase (SIS) RD08_RS01955 IPR004515 Phosphoheptose isomerase RD08_RS01960 IPR003509 Uncharacterised protein family UPF0102 RD08_RS01960 IPR011856 tRNA endonuclease-like domain RD08_RS01965 IPR000878 Tetrapyrrole methylase RD08_RS01965 IPR008189 rRNA small subunit methyltransferase I RD08_RS01965 IPR014776 Tetrapyrrole methylase, subdomain 2 RD08_RS01965 IPR014777 Tetrapyrrole methylase, subdomain 1 RD08_RS01965 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RD08_RS01970 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RD08_RS01970 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RD08_RS01970 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01970 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RD08_RS01975 IPR001584 Integrase, catalytic core RD08_RS01975 IPR009057 Homeodomain-like RD08_RS01975 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS01975 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS01975 IPR012337 Ribonuclease H-like domain RD08_RS01975 IPR024967 DNA-binding domain, IS481-type RD08_RS01985 IPR002109 Glutaredoxin RD08_RS01985 IPR012336 Thioredoxin-like fold RD08_RS01990 IPR003673 CoA-transferase family III RD08_RS01990 IPR023606 CoA-transferase family III domain RD08_RS01995 IPR005064 Bordetella uptake gene RD08_RS02000 IPR003673 CoA-transferase family III RD08_RS02000 IPR023606 CoA-transferase family III domain RD08_RS02005 IPR011051 RmlC-like cupin domain RD08_RS02005 IPR014710 RmlC-like jelly roll fold RD08_RS02010 IPR001763 Rhodanese-like domain RD08_RS02015 IPR001307 Thiosulphate sulfurtransferase, conserved site RD08_RS02015 IPR001763 Rhodanese-like domain RD08_RS02020 IPR005471 Transcription regulator IclR, N-terminal RD08_RS02020 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02020 IPR014757 Transcription regulator IclR, C-terminal RD08_RS02020 IPR029016 GAF domain-like RD08_RS02025 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD08_RS02025 IPR005982 Thioredoxin reductase RD08_RS02025 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD08_RS02025 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS02030 IPR001584 Integrase, catalytic core RD08_RS02030 IPR009057 Homeodomain-like RD08_RS02030 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02030 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02030 IPR012337 Ribonuclease H-like domain RD08_RS02030 IPR024967 DNA-binding domain, IS481-type RD08_RS02035 IPR005064 Bordetella uptake gene RD08_RS02035 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS02040 IPR001753 Crotonase superfamily RD08_RS02040 IPR029045 ClpP/crotonase-like domain RD08_RS02045 IPR003673 CoA-transferase family III RD08_RS02045 IPR023606 CoA-transferase family III domain RD08_RS02050 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS02050 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS02050 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS02050 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS02050 IPR029061 Thiamin diphosphate-binding fold RD08_RS02055 IPR000847 Transcription regulator HTH, LysR RD08_RS02055 IPR005119 LysR, substrate-binding RD08_RS02055 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02060 IPR001763 Rhodanese-like domain RD08_RS02065 IPR005064 Bordetella uptake gene RD08_RS02070 IPR011051 RmlC-like cupin domain RD08_RS02070 IPR014710 RmlC-like jelly roll fold RD08_RS02075 IPR005064 Bordetella uptake gene RD08_RS02080 IPR001584 Integrase, catalytic core RD08_RS02080 IPR009057 Homeodomain-like RD08_RS02080 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02080 IPR012337 Ribonuclease H-like domain RD08_RS02080 IPR024967 DNA-binding domain, IS481-type RD08_RS02085 IPR000620 Drug/metabolite transporter RD08_RS02090 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD08_RS02095 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS02095 IPR022742 Putative lysophospholipase RD08_RS02095 IPR029058 Alpha/Beta hydrolase fold RD08_RS02100 IPR007896 Transmembrane pair, bacterial RD08_RS02105 IPR002509 Polysaccharide deacetylase RD08_RS02105 IPR006879 Uncharacterised protein family UPF0249/HpnK RD08_RS02105 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD08_RS02115 IPR001173 Glycosyltransferase 2-like RD08_RS02115 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS02120 IPR000182 GNAT domain RD08_RS02120 IPR016181 Acyl-CoA N-acyltransferase RD08_RS02125 IPR001584 Integrase, catalytic core RD08_RS02125 IPR009057 Homeodomain-like RD08_RS02125 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02125 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02125 IPR012337 Ribonuclease H-like domain RD08_RS02125 IPR024967 DNA-binding domain, IS481-type RD08_RS02130 IPR004445 Sodium/glutamate symporter RD08_RS02135 IPR011852 TRAP transporter solute receptor, TAXI family RD08_RS02140 IPR006160 Short chain fatty acid transporter AtoE RD08_RS02155 IPR006054 DNA polymerase III, epsilon subunit RD08_RS02155 IPR006309 DNA polymerase 3, epsilon subunit RD08_RS02155 IPR012337 Ribonuclease H-like domain RD08_RS02155 IPR013520 Exonuclease, RNase T/DNA polymerase III RD08_RS02160 IPR001036 Acriflavin resistance protein RD08_RS02160 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD08_RS02165 IPR001584 Integrase, catalytic core RD08_RS02165 IPR009057 Homeodomain-like RD08_RS02165 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02165 IPR012337 Ribonuclease H-like domain RD08_RS02165 IPR024967 DNA-binding domain, IS481-type RD08_RS02170 IPR002840 Domain of unknown function DUF126 RD08_RS02170 IPR008279 PEP-utilising enzyme, mobile domain RD08_RS02170 IPR012016 Uncharacterised protein family UPF0107 RD08_RS02170 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS02175 IPR007506 Domain of unknown function DUF521 RD08_RS02180 IPR005064 Bordetella uptake gene RD08_RS02185 IPR000847 Transcription regulator HTH, LysR RD08_RS02185 IPR005119 LysR, substrate-binding RD08_RS02185 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02190 IPR006094 FAD linked oxidase, N-terminal RD08_RS02190 IPR012256 D-lactate dehydrogenase RD08_RS02190 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal RD08_RS02190 IPR016164 FAD-linked oxidase-like, C-terminal RD08_RS02190 IPR016166 FAD-binding, type 2 RD08_RS02190 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS02190 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS02190 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 RD08_RS02190 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 RD08_RS02195 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS02195 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS02195 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS02195 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS02200 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS02200 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS02200 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS02200 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS02205 IPR005064 Bordetella uptake gene RD08_RS02210 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD08_RS02210 IPR002933 Peptidase M20 RD08_RS02210 IPR010169 Acetylornithine deacetylase (ArgE) RD08_RS02210 IPR011650 Peptidase M20, dimerisation domain RD08_RS02215 IPR010430 Protein of unknown function DUF1028 RD08_RS02215 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS02220 IPR006175 YjgF/Yer057p/UK114 family RD08_RS02220 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS02225 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS02230 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS02230 IPR011032 GroES (chaperonin 10)-like RD08_RS02230 IPR013149 Alcohol dehydrogenase, C-terminal RD08_RS02230 IPR014188 Acrylyl-CoA reductase AcuI RD08_RS02230 IPR016040 NAD(P)-binding domain RD08_RS02230 IPR020843 Polyketide synthase, enoylreductase RD08_RS02235 IPR000847 Transcription regulator HTH, LysR RD08_RS02235 IPR005119 LysR, substrate-binding RD08_RS02235 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02240 IPR003781 CoA-binding RD08_RS02240 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS02240 IPR016040 NAD(P)-binding domain RD08_RS02240 IPR016102 Succinyl-CoA synthetase-like RD08_RS02240 IPR032875 RD08_RS02240 RD08_RS02245 IPR001753 Crotonase superfamily RD08_RS02245 IPR029045 ClpP/crotonase-like domain RD08_RS02250 IPR015168 SsuA/THI5-like RD08_RS02255 IPR005064 Bordetella uptake gene RD08_RS02260 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD08_RS02260 IPR016040 NAD(P)-binding domain RD08_RS02265 IPR001347 Sugar isomerase (SIS) RD08_RS02265 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RD08_RS02265 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS02270 IPR000485 AsnC-type HTH domain RD08_RS02270 IPR011008 Dimeric alpha-beta barrel RD08_RS02270 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02270 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS02270 IPR019888 Transcription regulator AsnC-type RD08_RS02275 IPR002155 Thiolase RD08_RS02275 IPR016039 Thiolase-like RD08_RS02275 IPR020613 Thiolase, conserved site RD08_RS02275 IPR020616 Thiolase, N-terminal RD08_RS02275 IPR020617 Thiolase, C-terminal RD08_RS02280 IPR001753 Crotonase superfamily RD08_RS02280 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD08_RS02280 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD08_RS02280 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS02280 IPR013328 Dehydrogenase, multihelical RD08_RS02280 IPR016040 NAD(P)-binding domain RD08_RS02280 IPR029045 ClpP/crotonase-like domain RD08_RS02285 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS02285 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS02285 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS02285 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS02290 IPR005064 Bordetella uptake gene RD08_RS02295 IPR003781 CoA-binding RD08_RS02295 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS02295 IPR016040 NAD(P)-binding domain RD08_RS02295 IPR016102 Succinyl-CoA synthetase-like RD08_RS02295 IPR032875 RD08_RS02295 RD08_RS02300 IPR002020 Citrate synthase-like RD08_RS02300 IPR016142 Citrate synthase-like, large alpha subdomain RD08_RS02300 IPR016143 Citrate synthase-like, small alpha subdomain RD08_RS02305 IPR005471 Transcription regulator IclR, N-terminal RD08_RS02305 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02305 IPR014757 Transcription regulator IclR, C-terminal RD08_RS02305 IPR029016 GAF domain-like RD08_RS02310 IPR006656 Molybdopterin oxidoreductase RD08_RS02310 IPR006657 Molydopterin dinucleotide-binding domain RD08_RS02310 IPR009010 Aspartate decarboxylase-like domain RD08_RS02315 IPR001584 Integrase, catalytic core RD08_RS02315 IPR009057 Homeodomain-like RD08_RS02315 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02315 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02315 IPR012337 Ribonuclease H-like domain RD08_RS02315 IPR024967 DNA-binding domain, IS481-type RD08_RS02320 IPR001584 Integrase, catalytic core RD08_RS02320 IPR009057 Homeodomain-like RD08_RS02320 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02320 IPR012337 Ribonuclease H-like domain RD08_RS02320 IPR024967 DNA-binding domain, IS481-type RD08_RS02330 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RD08_RS02330 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RD08_RS02330 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RD08_RS02330 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RD08_RS02330 IPR016040 NAD(P)-binding domain RD08_RS02330 IPR018214 Glutamyl-tRNA reductase, conserved site RD08_RS02335 IPR000352 Peptide chain release factor class I/class II RD08_RS02335 IPR004373 Peptide chain release factor 1 RD08_RS02335 IPR005139 Peptide chain release factor RD08_RS02335 IPR014720 Double-stranded RNA-binding domain RD08_RS02340 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD08_RS02340 IPR004556 Modification methylase HemK RD08_RS02340 IPR007848 Methyltransferase small domain RD08_RS02340 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RD08_RS02340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS02345 IPR002109 Glutaredoxin RD08_RS02345 IPR004480 Monothiol glutaredoxin-related RD08_RS02345 IPR012336 Thioredoxin-like fold RD08_RS02345 IPR014434 Monothiol glutaredoxin RD08_RS02350 IPR003382 Flavoprotein RD08_RS02350 IPR004507 Decarboxylase UbiX/Pad1 RD08_RS02355 IPR005064 Bordetella uptake gene RD08_RS02360 IPR015168 SsuA/THI5-like RD08_RS02365 IPR002346 Molybdopterin dehydrogenase, FAD-binding RD08_RS02365 IPR005107 CO dehydrogenase flavoprotein, C-terminal RD08_RS02365 IPR016166 FAD-binding, type 2 RD08_RS02365 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS02365 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS02370 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS02370 IPR002888 [2Fe-2S]-binding RD08_RS02370 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS02370 IPR012675 Beta-grasp domain RD08_RS02375 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD08_RS02375 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD08_RS02380 IPR010419 Carbon monoxide dehydrogenase subunit G RD08_RS02380 IPR023393 START-like domain RD08_RS02390 IPR001584 Integrase, catalytic core RD08_RS02390 IPR009057 Homeodomain-like RD08_RS02390 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02390 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02390 IPR012337 Ribonuclease H-like domain RD08_RS02390 IPR024967 DNA-binding domain, IS481-type RD08_RS02395 IPR007730 Sporulation-related domain RD08_RS02395 IPR009009 RlpA-like double-psi beta-barrel domain RD08_RS02395 IPR012997 Rare lipoprotein A, bacterial RD08_RS02400 IPR005337 ATPase, P-loop-containing RD08_RS02400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02410 IPR009056 Cytochrome c-like domain RD08_RS02410 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit RD08_RS02415 IPR003755 HPr(Ser) kinase/phosphorylase RD08_RS02415 IPR011104 HPr kinase/phosphorylase, C-terminal RD08_RS02415 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal RD08_RS02415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02415 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like RD08_RS02420 IPR002178 PTS EIIA type-2 domain RD08_RS02420 IPR016152 Phosphotransferase/anion transporter RD08_RS02425 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RD08_RS02430 IPR003439 ABC transporter-like RD08_RS02430 IPR003593 AAA+ ATPase domain RD08_RS02430 IPR017871 ABC transporter, conserved site RD08_RS02430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02430 IPR030921 RD08_RS02430 RD08_RS02430 IPR032823 RD08_RS02430 RD08_RS02435 IPR005653 Organic solvent tolerance-like, N-terminal RD08_RS02435 IPR014340 Lipopolysaccharide assembly, LptA RD08_RS02440 IPR010664 Lipopolysaccharide assembly, LptC-related RD08_RS02440 IPR026265 Lipopolysaccharide export system protein LptC RD08_RS02445 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RD08_RS02445 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase RD08_RS02445 IPR023214 HAD-like domain RD08_RS02450 IPR000644 CBS domain RD08_RS02450 IPR001347 Sugar isomerase (SIS) RD08_RS02450 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RD08_RS02455 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD08_RS02455 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD08_RS02455 IPR005862 Phosphoribosylglycinamide formyltransferase 2 RD08_RS02455 IPR011054 Rudiment single hybrid motif RD08_RS02455 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS02455 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS02455 IPR016185 Pre-ATP-grasp domain RD08_RS02460 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS02460 IPR012910 TonB-dependent receptor, plug RD08_RS02465 IPR001584 Integrase, catalytic core RD08_RS02465 IPR009057 Homeodomain-like RD08_RS02465 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02465 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02465 IPR012337 Ribonuclease H-like domain RD08_RS02465 IPR024967 DNA-binding domain, IS481-type RD08_RS02470 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RD08_RS02470 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RD08_RS02470 IPR012132 Glucose-methanol-choline oxidoreductase RD08_RS02470 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS02475 IPR009978 Protein of unknown function DUF1504 RD08_RS02480 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RD08_RS02485 IPR007462 Protein of unknown function DUF502 RD08_RS02490 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RD08_RS02490 IPR004115 GAD-like domain RD08_RS02490 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RD08_RS02490 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD08_RS02490 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type RD08_RS02490 IPR012340 Nucleic acid-binding, OB-fold RD08_RS02490 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RD08_RS02490 IPR029351 GAD domain RD08_RS02495 IPR005135 Endonuclease/exonuclease/phosphatase RD08_RS02500 IPR001736 Phospholipase D/Transphosphatidylase RD08_RS02500 IPR025202 Phospholipase D-like domain RD08_RS02500 IPR030872 RD08_RS02500 RD08_RS02505 IPR000620 Drug/metabolite transporter RD08_RS02515 IPR010419 Carbon monoxide dehydrogenase subunit G RD08_RS02515 IPR023393 START-like domain RD08_RS02520 IPR001584 Integrase, catalytic core RD08_RS02520 IPR009057 Homeodomain-like RD08_RS02520 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02520 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02520 IPR012337 Ribonuclease H-like domain RD08_RS02520 IPR024967 DNA-binding domain, IS481-type RD08_RS02525 IPR000709 Leu/Ile/Val-binding protein RD08_RS02525 IPR028081 Leucine-binding protein domain RD08_RS02525 IPR028082 Periplasmic binding protein-like I RD08_RS02530 IPR000120 Amidase RD08_RS02530 IPR023631 Amidase signature domain RD08_RS02535 IPR010300 Cysteine dioxygenase type I RD08_RS02535 IPR011051 RmlC-like cupin domain RD08_RS02535 IPR014710 RmlC-like jelly roll fold RD08_RS02540 IPR005471 Transcription regulator IclR, N-terminal RD08_RS02540 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02540 IPR014757 Transcription regulator IclR, C-terminal RD08_RS02540 IPR029016 GAF domain-like RD08_RS02555 IPR001753 Crotonase superfamily RD08_RS02555 IPR029045 ClpP/crotonase-like domain RD08_RS02560 IPR007939 Copper resistance B precursor RD08_RS02565 IPR001117 Multicopper oxidase, type 1 RD08_RS02565 IPR002355 Multicopper oxidase, copper-binding site RD08_RS02565 IPR006376 Copper-resistance protein CopA RD08_RS02565 IPR008972 Cupredoxin RD08_RS02565 IPR011706 Multicopper oxidase, type 2 RD08_RS02565 IPR011707 Multicopper oxidase, type 3 RD08_RS02565 IPR033138 RD08_RS02565 RD08_RS02570 IPR000923 Blue (type 1) copper domain RD08_RS02570 IPR008972 Cupredoxin RD08_RS02570 IPR028871 Blue (type 1) copper protein, binding site RD08_RS02575 IPR001584 Integrase, catalytic core RD08_RS02575 IPR009057 Homeodomain-like RD08_RS02575 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02575 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02575 IPR012337 Ribonuclease H-like domain RD08_RS02575 IPR024967 DNA-binding domain, IS481-type RD08_RS02580 IPR001584 Integrase, catalytic core RD08_RS02580 IPR009057 Homeodomain-like RD08_RS02580 IPR012337 Ribonuclease H-like domain RD08_RS02580 IPR024967 DNA-binding domain, IS481-type RD08_RS02590 IPR001584 Integrase, catalytic core RD08_RS02590 IPR009057 Homeodomain-like RD08_RS02590 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02590 IPR012337 Ribonuclease H-like domain RD08_RS02590 IPR024967 DNA-binding domain, IS481-type RD08_RS02595 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD08_RS02595 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD08_RS02595 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS02595 IPR013328 Dehydrogenase, multihelical RD08_RS02595 IPR016040 NAD(P)-binding domain RD08_RS02595 IPR022694 3-hydroxyacyl-CoA dehydrogenase RD08_RS02600 IPR003673 CoA-transferase family III RD08_RS02600 IPR023606 CoA-transferase family III domain RD08_RS02605 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS02605 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS02605 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS02605 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS02605 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS02610 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS02610 IPR009057 Homeodomain-like RD08_RS02610 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS02610 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS02610 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD08_RS02615 IPR004136 2-nitropropane dioxygenase, NPD RD08_RS02615 IPR013785 Aldolase-type TIM barrel RD08_RS02620 IPR001753 Crotonase superfamily RD08_RS02620 IPR029045 ClpP/crotonase-like domain RD08_RS02625 IPR001753 Crotonase superfamily RD08_RS02625 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS02625 IPR029045 ClpP/crotonase-like domain RD08_RS02630 IPR000631 YjeF C-terminal domain RD08_RS02630 IPR017953 Carbohydrate kinase, predicted, conserved site RD08_RS02630 IPR029056 Ribokinase-like RD08_RS02645 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD08_RS02650 IPR000515 MetI-like domain RD08_RS02655 IPR000515 MetI-like domain RD08_RS02660 IPR003439 ABC transporter-like RD08_RS02660 IPR003593 AAA+ ATPase domain RD08_RS02660 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS02660 IPR017871 ABC transporter, conserved site RD08_RS02660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02665 IPR029058 Alpha/Beta hydrolase fold RD08_RS02670 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD08_RS02670 IPR002933 Peptidase M20 RD08_RS02670 IPR011650 Peptidase M20, dimerisation domain RD08_RS02670 IPR017150 Peptidase M20, glutamate carboxypeptidase RD08_RS02675 IPR001584 Integrase, catalytic core RD08_RS02675 IPR009057 Homeodomain-like RD08_RS02675 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02675 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02675 IPR012337 Ribonuclease H-like domain RD08_RS02675 IPR024967 DNA-binding domain, IS481-type RD08_RS02680 IPR000212 DNA helicase, UvrD/REP type RD08_RS02680 IPR005752 DNA helicase, ATP-dependent, RepA type RD08_RS02680 IPR013986 DExx box DNA helicase domain RD08_RS02680 IPR014016 UvrD-like Helicase, ATP-binding domain RD08_RS02680 IPR014017 DNA helicase, UvrD-like, C-terminal RD08_RS02680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02685 IPR001650 Helicase, C-terminal RD08_RS02685 IPR005259 Primosomal protein n RD08_RS02685 IPR011545 DEAD/DEAH box helicase domain RD08_RS02685 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS02685 IPR024064 FdhE-like RD08_RS02685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02690 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RD08_RS02690 IPR006361 Uroporphyrinogen decarboxylase HemE RD08_RS02695 IPR002197 DNA binding HTH domain, Fis-type RD08_RS02695 IPR009057 Homeodomain-like RD08_RS02700 IPR001469 ATPase, F1 complex, delta/epsilon subunit RD08_RS02700 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal RD08_RS02700 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain RD08_RS02705 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD08_RS02705 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RD08_RS02705 IPR003593 AAA+ ATPase domain RD08_RS02705 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD08_RS02705 IPR005722 ATPase, F1 complex, beta subunit RD08_RS02705 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD08_RS02705 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal RD08_RS02705 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02710 IPR000131 ATPase, F1 complex, gamma subunit RD08_RS02710 IPR023632 ATPase, F1 complex, gamma subunit conserved site RD08_RS02710 IPR023633 ATPase, F1 complex, gamma subunit domain RD08_RS02715 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD08_RS02715 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RD08_RS02715 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD08_RS02715 IPR005294 ATPase, F1 complex, alpha subunit RD08_RS02715 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD08_RS02715 IPR023366 ATP synthase subunit alpha-like domain RD08_RS02715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02720 IPR000711 ATPase, OSCP/delta subunit RD08_RS02720 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RD08_RS02725 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast RD08_RS02725 IPR005864 ATPase, F0 complex, subunit B, bacterial RD08_RS02725 IPR028987 F-type ATP synthase subunit B-like, membrane domain RD08_RS02730 IPR000454 ATPase, F0 complex, subunit C RD08_RS02730 IPR002379 V-ATPase proteolipid subunit C-like domain RD08_RS02730 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast RD08_RS02730 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RD08_RS02735 IPR000568 ATPase, F0 complex, subunit A RD08_RS02735 IPR023011 ATPase, F0 complex, subunit A, active site RD08_RS02740 IPR005598 ATP synthase protein I RD08_RS02745 IPR010621 Domain of unknown function DUF1214 RD08_RS02750 IPR001584 Integrase, catalytic core RD08_RS02750 IPR009057 Homeodomain-like RD08_RS02750 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02750 IPR012337 Ribonuclease H-like domain RD08_RS02750 IPR024967 DNA-binding domain, IS481-type RD08_RS02755 IPR010679 Domain of unknown function DUF1254 RD08_RS02755 IPR023289 VPA0735-like domain RD08_RS02760 IPR001753 Crotonase superfamily RD08_RS02760 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS02760 IPR029045 ClpP/crotonase-like domain RD08_RS02765 IPR001478 PDZ domain RD08_RS02765 IPR007963 Peptidase M61, catalytic domain RD08_RS02765 IPR024191 Peptidase M61 RD08_RS02770 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD08_RS02770 IPR016040 NAD(P)-binding domain RD08_RS02770 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS02775 IPR006156 Dihydroneopterin aldolase RD08_RS02775 IPR006157 Dihydroneopterin aldolase/epimerase domain RD08_RS02780 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RD08_RS02780 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA RD08_RS02780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS02785 IPR001584 Integrase, catalytic core RD08_RS02785 IPR009057 Homeodomain-like RD08_RS02785 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02785 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02785 IPR012337 Ribonuclease H-like domain RD08_RS02785 IPR024967 DNA-binding domain, IS481-type RD08_RS02790 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD08_RS02790 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD08_RS02790 IPR016040 NAD(P)-binding domain RD08_RS02790 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD08_RS02795 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RD08_RS02795 IPR012336 Thioredoxin-like fold RD08_RS02795 IPR017937 Thioredoxin, conserved site RD08_RS02795 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RD08_RS02800 IPR002938 Monooxygenase, FAD-binding RD08_RS02800 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RD08_RS02800 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RD08_RS02800 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS02805 IPR005300 Lytic transglycosylase MltA RD08_RS02805 IPR009009 RlpA-like double-psi beta-barrel domain RD08_RS02805 IPR010611 3D domain RD08_RS02805 IPR026044 Membrane-bound lytic murein transglycosylase A RD08_RS02810 IPR007474 ApaG domain RD08_RS02810 IPR023065 Uncharacterised protein family ApaG RD08_RS02815 IPR000056 Ribulose-phosphate 3-epimerase-like RD08_RS02815 IPR011060 Ribulose-phosphate binding barrel RD08_RS02815 IPR013785 Aldolase-type TIM barrel RD08_RS02815 IPR026019 Ribulose-phosphate 3-epimerase RD08_RS02820 IPR006346 2-phosphoglycolate phosphatase, prokaryotic RD08_RS02820 IPR006439 HAD hydrolase, subfamily IA RD08_RS02820 IPR023198 Phosphoglycolate phosphatase, domain 2 RD08_RS02820 IPR023214 HAD-like domain RD08_RS02825 IPR005256 Anthranilate synthase component I, PabB-like RD08_RS02825 IPR005801 ADC synthase RD08_RS02825 IPR006805 Anthranilate synthase component I, N-terminal RD08_RS02825 IPR015890 Chorismate binding, C-terminal RD08_RS02825 IPR019999 Anthranilate synthase component I - like RD08_RS02830 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RD08_RS02830 IPR017926 Glutamine amidotransferase RD08_RS02830 IPR029062 Class I glutamine amidotransferase-like RD08_RS02835 IPR000312 Glycosyl transferase, family 3 RD08_RS02835 IPR005940 Anthranilate phosphoribosyl transferase RD08_RS02835 IPR017459 Glycosyl transferase family 3, N-terminal domain RD08_RS02840 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RD08_RS02840 IPR011060 Ribulose-phosphate binding barrel RD08_RS02840 IPR013785 Aldolase-type TIM barrel RD08_RS02840 IPR013798 Indole-3-glycerol phosphate synthase RD08_RS02845 IPR001584 Integrase, catalytic core RD08_RS02845 IPR009057 Homeodomain-like RD08_RS02845 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02845 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02845 IPR012337 Ribonuclease H-like domain RD08_RS02845 IPR024967 DNA-binding domain, IS481-type RD08_RS02855 IPR010621 Domain of unknown function DUF1214 RD08_RS02855 IPR010679 Domain of unknown function DUF1254 RD08_RS02855 IPR023289 VPA0735-like domain RD08_RS02860 IPR001584 Integrase, catalytic core RD08_RS02860 IPR009057 Homeodomain-like RD08_RS02860 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS02860 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02860 IPR012337 Ribonuclease H-like domain RD08_RS02860 IPR024967 DNA-binding domain, IS481-type RD08_RS02865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS02865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS02865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS02870 IPR000847 Transcription regulator HTH, LysR RD08_RS02870 IPR005119 LysR, substrate-binding RD08_RS02870 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02875 IPR002376 Formyl transferase, N-terminal RD08_RS02875 IPR002912 ACT domain RD08_RS02875 IPR004810 Formyltetrahydrofolate deformylase RD08_RS02880 IPR006076 FAD dependent oxidoreductase RD08_RS02880 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS02885 IPR002563 Flavin reductase-like, FMN-binding RD08_RS02885 IPR012349 FMN-binding split barrel RD08_RS02890 IPR000659 Pyridoxamine 5'-phosphate oxidase RD08_RS02890 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD08_RS02890 IPR012349 FMN-binding split barrel RD08_RS02890 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RD08_RS02890 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RD08_RS02895 IPR006840 ChaC-like protein RD08_RS02895 IPR013024 Butirosin biosynthesis, BtrG-like RD08_RS02900 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG RD08_RS02900 IPR011701 Major facilitator superfamily RD08_RS02900 IPR020846 Major facilitator superfamily domain RD08_RS02905 IPR000594 UBA/THIF-type NAD/FAD binding fold RD08_RS02905 IPR016040 NAD(P)-binding domain RD08_RS02910 IPR000524 Transcription regulator HTH, GntR RD08_RS02910 IPR011663 UbiC transcription regulator-associated RD08_RS02910 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02910 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS02915 IPR000873 AMP-dependent synthetase/ligase RD08_RS02915 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS02920 IPR005064 Bordetella uptake gene RD08_RS02925 IPR002347 Glucose/ribitol dehydrogenase RD08_RS02925 IPR016040 NAD(P)-binding domain RD08_RS02930 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS02930 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS02935 IPR001544 Aminotransferase, class IV RD08_RS02940 IPR005801 ADC synthase RD08_RS02940 IPR005802 Para-aminobenzoate synthase, component I RD08_RS02940 IPR015890 Chorismate binding, C-terminal RD08_RS02940 IPR019999 Anthranilate synthase component I - like RD08_RS02945 IPR003439 ABC transporter-like RD08_RS02945 IPR003593 AAA+ ATPase domain RD08_RS02945 IPR004602 UvrABC system subunit A RD08_RS02945 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS02945 IPR017871 ABC transporter, conserved site RD08_RS02945 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02955 IPR000847 Transcription regulator HTH, LysR RD08_RS02955 IPR005119 LysR, substrate-binding RD08_RS02955 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS02960 IPR001173 Glycosyltransferase 2-like RD08_RS02960 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS02965 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS02965 IPR030678 RD08_RS02965 RD08_RS02970 IPR000515 MetI-like domain RD08_RS02975 IPR000620 Drug/metabolite transporter RD08_RS02980 IPR003439 ABC transporter-like RD08_RS02980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS02985 IPR000868 Isochorismatase-like RD08_RS02990 IPR008816 Glycine zipper 2TM domain RD08_RS02995 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS02995 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS03000 IPR005527 Septum formation topological specificity factor MinE RD08_RS03005 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RD08_RS03005 IPR010223 ATP binding protein MinD, bacterial-type RD08_RS03005 IPR025501 ATP binding protein MinD RD08_RS03005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03010 IPR005526 Septum formation inhibitor MinC, C-terminal RD08_RS03010 IPR007874 Septum formation inhibitor MinC, N-terminal RD08_RS03010 IPR013033 Septum formation inhibitor MinC RD08_RS03010 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal RD08_RS03015 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RD08_RS03015 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD08_RS03015 IPR004514 Glutamine-tRNA synthetase RD08_RS03015 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RD08_RS03015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS03015 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RD08_RS03015 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RD08_RS03015 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain RD08_RS03015 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RD08_RS03015 IPR022861 Glutamine-tRNA ligase, bacterial RD08_RS03020 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RD08_RS03025 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RD08_RS03030 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS03030 IPR003660 HAMP linker domain RD08_RS03030 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS03030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS03035 IPR001789 Signal transduction response regulator, receiver domain RD08_RS03035 IPR001867 Signal transduction response regulator, C-terminal RD08_RS03035 IPR011006 CheY-like superfamily RD08_RS03035 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03035 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS03045 IPR001584 Integrase, catalytic core RD08_RS03045 IPR009057 Homeodomain-like RD08_RS03045 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03045 IPR012337 Ribonuclease H-like domain RD08_RS03045 IPR024967 DNA-binding domain, IS481-type RD08_RS03050 IPR005064 Bordetella uptake gene RD08_RS03055 IPR007486 Protein of unknown function DUF533 RD08_RS03055 IPR029024 TerB-like RD08_RS03060 IPR003718 OsmC/Ohr family RD08_RS03060 IPR015946 K homology domain-like, alpha/beta RD08_RS03065 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS03065 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS03070 IPR002347 Glucose/ribitol dehydrogenase RD08_RS03070 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RD08_RS03070 IPR016040 NAD(P)-binding domain RD08_RS03075 IPR000189 Prokaryotic transglycosylase, active site RD08_RS03075 IPR008258 Lytic transglycosylase-like SLT domain RD08_RS03075 IPR018392 LysM domain RD08_RS03075 IPR023346 Lysozyme-like domain RD08_RS03080 IPR001279 Beta-lactamase-like RD08_RS03080 IPR017782 Hydroxyacylglutathione hydrolase RD08_RS03080 IPR032282 RD08_RS03080 RD08_RS03085 IPR013216 Methyltransferase type 11 RD08_RS03085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS03090 IPR002156 Ribonuclease H domain RD08_RS03090 IPR012337 Ribonuclease H-like domain RD08_RS03090 IPR022892 Ribonuclease H RD08_RS03095 IPR001584 Integrase, catalytic core RD08_RS03095 IPR009057 Homeodomain-like RD08_RS03095 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03095 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03095 IPR012337 Ribonuclease H-like domain RD08_RS03095 IPR024967 DNA-binding domain, IS481-type RD08_RS03100 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD08_RS03100 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD08_RS03100 IPR016039 Thiolase-like RD08_RS03105 IPR016039 Thiolase-like RD08_RS03110 IPR005804 Fatty acid desaturase, type 1 RD08_RS03125 IPR001584 Integrase, catalytic core RD08_RS03125 IPR009057 Homeodomain-like RD08_RS03125 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03125 IPR012337 Ribonuclease H-like domain RD08_RS03125 IPR024967 DNA-binding domain, IS481-type RD08_RS03130 IPR016040 NAD(P)-binding domain RD08_RS03135 IPR002539 MaoC-like domain RD08_RS03135 IPR029069 HotDog domain RD08_RS03140 IPR002155 Thiolase RD08_RS03140 IPR016039 Thiolase-like RD08_RS03140 IPR020617 Thiolase, C-terminal RD08_RS03145 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD08_RS03145 IPR012340 Nucleic acid-binding, OB-fold RD08_RS03145 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD08_RS03150 IPR001753 Crotonase superfamily RD08_RS03150 IPR014748 Crontonase, C-terminal RD08_RS03150 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS03150 IPR029045 ClpP/crotonase-like domain RD08_RS03155 IPR002347 Glucose/ribitol dehydrogenase RD08_RS03155 IPR016040 NAD(P)-binding domain RD08_RS03155 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS03160 IPR000709 Leu/Ile/Val-binding protein RD08_RS03160 IPR028081 Leucine-binding protein domain RD08_RS03160 IPR028082 Periplasmic binding protein-like I RD08_RS03165 IPR003439 ABC transporter-like RD08_RS03165 IPR003593 AAA+ ATPase domain RD08_RS03165 IPR017871 ABC transporter, conserved site RD08_RS03165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03165 IPR032823 RD08_RS03165 RD08_RS03170 IPR003439 ABC transporter-like RD08_RS03170 IPR003593 AAA+ ATPase domain RD08_RS03170 IPR017871 ABC transporter, conserved site RD08_RS03170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03175 IPR001851 ABC transporter, permease RD08_RS03180 IPR001851 ABC transporter, permease RD08_RS03185 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS03185 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS03185 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS03185 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS03185 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS03190 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS03190 IPR009057 Homeodomain-like RD08_RS03190 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS03190 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS03195 IPR000873 AMP-dependent synthetase/ligase RD08_RS03195 IPR028154 AMP-dependent ligase, C-terminal RD08_RS03200 IPR003673 CoA-transferase family III RD08_RS03200 IPR023606 CoA-transferase family III domain RD08_RS03205 IPR002347 Glucose/ribitol dehydrogenase RD08_RS03205 IPR016040 NAD(P)-binding domain RD08_RS03210 IPR001584 Integrase, catalytic core RD08_RS03210 IPR009057 Homeodomain-like RD08_RS03210 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03210 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03210 IPR012337 Ribonuclease H-like domain RD08_RS03210 IPR024967 DNA-binding domain, IS481-type RD08_RS03220 IPR002035 von Willebrand factor, type A RD08_RS03220 IPR006698 Thermus phage phiYS40, Orf56 RD08_RS03225 IPR007390 Sporulation stage V, protein R RD08_RS03230 IPR011701 Major facilitator superfamily RD08_RS03230 IPR020846 Major facilitator superfamily domain RD08_RS03235 IPR005656 MmgE/PrpD RD08_RS03240 IPR005064 Bordetella uptake gene RD08_RS03245 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD08_RS03245 IPR006395 Methylaspartate ammonia-lyase RD08_RS03245 IPR022662 Methylaspartate ammonia-lyase, C-terminal RD08_RS03245 IPR022665 Methylaspartate ammonia-lyase, N-terminal RD08_RS03245 IPR029017 Enolase N-terminal domain-like RD08_RS03245 IPR029065 Enolase C-terminal domain-like RD08_RS03250 IPR000524 Transcription regulator HTH, GntR RD08_RS03250 IPR011663 UbiC transcription regulator-associated RD08_RS03250 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03250 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS03260 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD08_RS03260 IPR011057 Mss4-like RD08_RS03265 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS03265 IPR012675 Beta-grasp domain RD08_RS03265 IPR018298 Adrenodoxin, iron-sulphur binding site RD08_RS03270 IPR000551 MerR-type HTH domain RD08_RS03270 IPR009061 DNA binding domain, putative RD08_RS03270 IPR015358 Transcription regulator MerR, DNA binding RD08_RS03275 IPR002669 Urease accessory protein UreD RD08_RS03280 IPR002026 Urease, gamma/gamma-beta subunit RD08_RS03280 IPR012010 Urease, gamma subunit RD08_RS03285 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RD08_RS03290 IPR002019 Urease, beta subunit RD08_RS03295 IPR005848 Urease, alpha subunit RD08_RS03295 IPR006680 Amidohydrolase 1 RD08_RS03295 IPR011059 Metal-dependent hydrolase, composite domain RD08_RS03295 IPR011612 Urease alpha-subunit, N-terminal domain RD08_RS03295 IPR017950 Urease active site RD08_RS03295 IPR029754 Urease nickel binding site RD08_RS03295 IPR032466 RD08_RS03295 RD08_RS03300 IPR004029 UreE urease accessory, N-terminal RD08_RS03300 IPR007864 Urease accessory protein UreE, C-terminal domain RD08_RS03300 IPR012406 Urease accessory protein UreE RD08_RS03305 IPR002639 Urease accessory protein UreF RD08_RS03310 IPR003495 CobW/HypB/UreG domain RD08_RS03310 IPR004400 Urease accessory protein UreG RD08_RS03310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03315 IPR001584 Integrase, catalytic core RD08_RS03315 IPR009057 Homeodomain-like RD08_RS03315 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03315 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03315 IPR012337 Ribonuclease H-like domain RD08_RS03315 IPR024967 DNA-binding domain, IS481-type RD08_RS03320 IPR001584 Integrase, catalytic core RD08_RS03320 IPR009057 Homeodomain-like RD08_RS03320 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03320 IPR012337 Ribonuclease H-like domain RD08_RS03320 IPR024967 DNA-binding domain, IS481-type RD08_RS03325 IPR009197 Microcystin LR degradation protein MlrC RD08_RS03325 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD08_RS03325 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD08_RS03335 IPR000515 MetI-like domain RD08_RS03340 IPR000515 MetI-like domain RD08_RS03345 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS03345 IPR030678 RD08_RS03345 RD08_RS03350 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD08_RS03350 IPR015590 Aldehyde dehydrogenase domain RD08_RS03350 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS03350 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS03350 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS03350 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS03355 IPR005814 Aminotransferase class-III RD08_RS03355 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS03355 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS03355 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS03360 IPR000524 Transcription regulator HTH, GntR RD08_RS03360 IPR004839 Aminotransferase, class I/classII RD08_RS03360 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03360 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS03360 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS03365 IPR001796 Dihydrofolate reductase domain RD08_RS03365 IPR012259 Dihydrofolate reductase RD08_RS03365 IPR017925 Dihydrofolate reductase conserved site RD08_RS03365 IPR024072 Dihydrofolate reductase-like domain RD08_RS03370 IPR000398 Thymidylate synthase RD08_RS03370 IPR020940 Thymidylate synthase, active site RD08_RS03370 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RD08_RS03375 IPR003718 OsmC/Ohr family RD08_RS03375 IPR015946 K homology domain-like, alpha/beta RD08_RS03380 IPR009078 Ferritin-like superfamily RD08_RS03380 IPR011566 Ubiquinone biosynthesis protein Coq7 RD08_RS03380 IPR012347 Ferritin-related RD08_RS03385 IPR000715 Glycosyl transferase, family 4 RD08_RS03390 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD08_RS03390 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS03390 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD08_RS03390 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD08_RS03390 IPR016040 NAD(P)-binding domain RD08_RS03390 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD08_RS03390 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RD08_RS03395 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD08_RS03395 IPR008089 Nucleotide sugar epimerase RD08_RS03395 IPR016040 NAD(P)-binding domain RD08_RS03400 IPR004268 Flagellin assembly, membrane protein MviN RD08_RS03405 IPR001296 Glycosyl transferase, family 1 RD08_RS03405 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS03410 IPR001962 Asparagine synthase RD08_RS03410 IPR006426 Asparagine synthase, glutamine-hydrolyzing RD08_RS03410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS03410 IPR017932 Glutamine amidotransferase type 2 domain RD08_RS03410 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS03415 IPR001296 Glycosyl transferase, family 1 RD08_RS03415 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS03420 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS03425 IPR001296 Glycosyl transferase, family 1 RD08_RS03425 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS03430 IPR001672 Phosphoglucose isomerase (PGI) RD08_RS03430 IPR018189 Phosphoglucose isomerase, conserved site RD08_RS03430 IPR023096 Phosphoglucose isomerase, C-terminal RD08_RS03435 IPR005841 Alpha-D-phosphohexomutase superfamily RD08_RS03435 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD08_RS03435 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD08_RS03435 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD08_RS03435 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD08_RS03435 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD08_RS03435 IPR016066 Alpha-D-phosphohexomutase, conserved site RD08_RS03440 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD08_RS03440 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS03445 IPR004113 FAD-linked oxidase, C-terminal RD08_RS03445 IPR006094 FAD linked oxidase, N-terminal RD08_RS03445 IPR016164 FAD-linked oxidase-like, C-terminal RD08_RS03445 IPR016166 FAD-binding, type 2 RD08_RS03445 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS03445 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS03445 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD08_RS03450 IPR001789 Signal transduction response regulator, receiver domain RD08_RS03450 IPR001867 Signal transduction response regulator, C-terminal RD08_RS03450 IPR011006 CheY-like superfamily RD08_RS03450 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03455 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS03455 IPR003660 HAMP linker domain RD08_RS03455 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS03460 IPR000917 Sulfatase RD08_RS03460 IPR012160 Membrane sulfatase, HI1246-related RD08_RS03460 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD08_RS03460 IPR017850 Alkaline-phosphatase-like, core domain RD08_RS03465 IPR005959 Fumarylacetoacetase RD08_RS03465 IPR011234 Fumarylacetoacetase, C-terminal-related RD08_RS03465 IPR015377 Fumarylacetoacetase, N-terminal RD08_RS03470 IPR005708 Homogentisate 1,2-dioxygenase RD08_RS03470 IPR011051 RmlC-like cupin domain RD08_RS03470 IPR014710 RmlC-like jelly roll fold RD08_RS03470 IPR022950 Homogentisate 1,2-dioxygenase, bacterial RD08_RS03475 IPR000847 Transcription regulator HTH, LysR RD08_RS03475 IPR005119 LysR, substrate-binding RD08_RS03475 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03480 IPR021233 Protein of unknown function DUF2783 RD08_RS03485 IPR002938 Monooxygenase, FAD-binding RD08_RS03485 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS03490 IPR001279 Beta-lactamase-like RD08_RS03495 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RD08_RS03495 IPR010979 Ribosomal protein S13-like, H2TH RD08_RS03495 IPR012319 DNA glycosylase/AP lyase, catalytic domain RD08_RS03495 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RD08_RS03495 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RD08_RS03495 IPR020629 Formamidopyrimidine-DNA glycosylase RD08_RS03500 IPR011990 Tetratricopeptide-like helical domain RD08_RS03500 IPR019734 Tetratricopeptide repeat RD08_RS03505 IPR004565 Outer membrane lipoprotein LolB RD08_RS03505 IPR029046 Lipoprotein localisation LolA/LolB/LppX RD08_RS03510 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RD08_RS03510 IPR006204 GHMP kinase N-terminal domain RD08_RS03510 IPR013750 GHMP kinase, C-terminal domain RD08_RS03510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS03510 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS03520 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RD08_RS03520 IPR005946 Ribose-phosphate diphosphokinase RD08_RS03520 IPR029057 Phosphoribosyltransferase-like RD08_RS03520 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RD08_RS03525 IPR001021 Ribosomal protein L25, long-form RD08_RS03525 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RD08_RS03525 IPR020055 Ribosomal protein L25, short-form RD08_RS03525 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RD08_RS03525 IPR020057 Ribosomal protein L25, beta domain RD08_RS03525 IPR029751 Ribosomal protein L25 RD08_RS03530 IPR001328 Peptidyl-tRNA hydrolase RD08_RS03530 IPR018171 Peptidyl-tRNA hydrolase, conserved site RD08_RS03535 IPR003675 CAAX amino terminal protease RD08_RS03540 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RD08_RS03540 IPR006073 GTP binding domain RD08_RS03540 IPR012675 Beta-grasp domain RD08_RS03540 IPR012676 TGS-like RD08_RS03540 IPR013029 Domain of unknown function DUF933 RD08_RS03540 IPR023192 TGS-like domain RD08_RS03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03545 IPR002104 Integrase, catalytic RD08_RS03545 IPR004107 Integrase, SAM-like, N-terminal RD08_RS03545 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD08_RS03545 IPR013762 Integrase-like, catalytic core RD08_RS03545 IPR023109 Integrase/recombinase, N-terminal RD08_RS03545 IPR025166 Domain of unknown function DUF4102 RD08_RS03550 IPR003812 Fido domain RD08_RS03555 IPR006935 Helicase/UvrB domain RD08_RS03555 IPR011578 Restriction endonuclease, FokI, C-terminal/endonuclease I, core RD08_RS03555 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03560 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class RD08_RS03560 IPR002941 DNA methylase N-4/N-6 RD08_RS03560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS03565 IPR003959 ATPase, AAA-type, core RD08_RS03565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03570 IPR001584 Integrase, catalytic core RD08_RS03570 IPR009057 Homeodomain-like RD08_RS03570 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03570 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03570 IPR012337 Ribonuclease H-like domain RD08_RS03570 IPR024967 DNA-binding domain, IS481-type RD08_RS03585 IPR000212 DNA helicase, UvrD/REP type RD08_RS03585 IPR014016 UvrD-like Helicase, ATP-binding domain RD08_RS03585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03590 IPR000212 DNA helicase, UvrD/REP type RD08_RS03590 IPR014017 DNA helicase, UvrD-like, C-terminal RD08_RS03590 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03595 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD08_RS03595 IPR013762 Integrase-like, catalytic core RD08_RS03595 IPR024456 Integrase catalytic domain, putative RD08_RS03600 IPR001584 Integrase, catalytic core RD08_RS03600 IPR009057 Homeodomain-like RD08_RS03600 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03600 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03600 IPR012337 Ribonuclease H-like domain RD08_RS03600 IPR024967 DNA-binding domain, IS481-type RD08_RS03605 IPR005546 Autotransporter beta-domain RD08_RS03605 IPR006315 Outer membrane autotransporter barrel RD08_RS03605 IPR011050 Pectin lyase fold/virulence factor RD08_RS03605 IPR012332 P22 tailspike C-terminal domain-like RD08_RS03605 IPR013425 Autotransporter-associated beta strand repeat RD08_RS03610 IPR011050 Pectin lyase fold/virulence factor RD08_RS03610 IPR012332 P22 tailspike C-terminal domain-like RD08_RS03610 IPR013425 Autotransporter-associated beta strand repeat RD08_RS03610 IPR024973 ESPR domain RD08_RS03615 IPR001867 Signal transduction response regulator, C-terminal RD08_RS03615 IPR011990 Tetratricopeptide-like helical domain RD08_RS03615 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03615 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS03625 IPR001584 Integrase, catalytic core RD08_RS03625 IPR009057 Homeodomain-like RD08_RS03625 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03625 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03625 IPR012337 Ribonuclease H-like domain RD08_RS03625 IPR024967 DNA-binding domain, IS481-type RD08_RS03630 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS03630 IPR009057 Homeodomain-like RD08_RS03630 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS03630 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS03630 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD08_RS03645 IPR001584 Integrase, catalytic core RD08_RS03645 IPR009057 Homeodomain-like RD08_RS03645 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03645 IPR012337 Ribonuclease H-like domain RD08_RS03645 IPR024967 DNA-binding domain, IS481-type RD08_RS03650 IPR000551 MerR-type HTH domain RD08_RS03650 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS03650 IPR009061 DNA binding domain, putative RD08_RS03650 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03650 IPR011051 RmlC-like cupin domain RD08_RS03650 IPR013096 Cupin 2, conserved barrel RD08_RS03650 IPR014710 RmlC-like jelly roll fold RD08_RS03655 IPR006076 FAD dependent oxidoreductase RD08_RS03655 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS03660 IPR008579 Domain of unknown function DUF861, cupin-3 RD08_RS03660 IPR011051 RmlC-like cupin domain RD08_RS03660 IPR014710 RmlC-like jelly roll fold RD08_RS03665 IPR000101 Gamma-glutamyltranspeptidase RD08_RS03665 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS03670 IPR005064 Bordetella uptake gene RD08_RS03675 IPR005950 Molybdenum ABC transporter, periplasmic binding protein RD08_RS03680 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD08_RS03685 IPR001584 Integrase, catalytic core RD08_RS03685 IPR009057 Homeodomain-like RD08_RS03685 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03685 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03685 IPR012337 Ribonuclease H-like domain RD08_RS03685 IPR024967 DNA-binding domain, IS481-type RD08_RS03690 IPR000485 AsnC-type HTH domain RD08_RS03690 IPR000524 Transcription regulator HTH, GntR RD08_RS03690 IPR011008 Dimeric alpha-beta barrel RD08_RS03690 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03690 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS03690 IPR019888 Transcription regulator AsnC-type RD08_RS03710 IPR025421 Protein of unknown function DUF4148 RD08_RS03720 IPR010852 Protein of unknown function DUF1470 RD08_RS03720 IPR021005 Zinc finger, CGNR RD08_RS03720 IPR023286 ABATE domain RD08_RS03725 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS03725 IPR000639 Epoxide hydrolase-like RD08_RS03725 IPR029058 Alpha/Beta hydrolase fold RD08_RS03730 IPR005950 Molybdenum ABC transporter, periplasmic binding protein RD08_RS03735 IPR000515 MetI-like domain RD08_RS03735 IPR011867 Molybdate ABC transporter, permease protein RD08_RS03740 IPR003439 ABC transporter-like RD08_RS03740 IPR003593 AAA+ ATPase domain RD08_RS03740 IPR005116 Transport-associated OB, type 1 RD08_RS03740 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS03740 IPR011868 Molybdate ABC transporter, ATP-binding protein RD08_RS03740 IPR017871 ABC transporter, conserved site RD08_RS03740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03745 IPR001736 Phospholipase D/Transphosphatidylase RD08_RS03745 IPR025202 Phospholipase D-like domain RD08_RS03750 IPR001584 Integrase, catalytic core RD08_RS03750 IPR009057 Homeodomain-like RD08_RS03750 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03750 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03750 IPR012337 Ribonuclease H-like domain RD08_RS03750 IPR024967 DNA-binding domain, IS481-type RD08_RS03755 IPR002043 Uracil-DNA glycosylase RD08_RS03755 IPR005122 Uracil-DNA glycosylase-like RD08_RS03755 IPR018085 Uracil-DNA glycosylase, active site RD08_RS03760 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD08_RS03760 IPR001650 Helicase, C-terminal RD08_RS03760 IPR011545 DEAD/DEAH box helicase domain RD08_RS03760 IPR012969 Fibrinogen binding protein RD08_RS03760 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS03760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03765 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RD08_RS03765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS03770 IPR002646 Poly A polymerase, head domain RD08_RS03770 IPR012006 tRNA nucleotidyltransferase, proteobacteria RD08_RS03770 IPR032828 RD08_RS03770 RD08_RS03775 IPR008258 Lytic transglycosylase-like SLT domain RD08_RS03775 IPR008939 Lytic transglycosylase, superhelical U-shaped RD08_RS03775 IPR012289 Lytic transglycosylase, superhelical linker RD08_RS03775 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain RD08_RS03775 IPR023346 Lysozyme-like domain RD08_RS03780 IPR002698 5-formyltetrahydrofolate cyclo-ligase RD08_RS03780 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RD08_RS03785 IPR005828 General substrate transporter RD08_RS03785 IPR020846 Major facilitator superfamily domain RD08_RS03790 IPR000286 Histone deacetylase superfamily RD08_RS03790 IPR023801 Histone deacetylase domain RD08_RS03795 IPR000847 Transcription regulator HTH, LysR RD08_RS03795 IPR005119 LysR, substrate-binding RD08_RS03795 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03800 IPR001584 Integrase, catalytic core RD08_RS03800 IPR009057 Homeodomain-like RD08_RS03800 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03800 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03800 IPR012337 Ribonuclease H-like domain RD08_RS03800 IPR024967 DNA-binding domain, IS481-type RD08_RS03805 IPR003171 Methylenetetrahydrofolate reductase RD08_RS03805 IPR004620 5,10-methylenetetrahydrofolate reductase RD08_RS03805 IPR029041 FAD-linked oxidoreductase-like RD08_RS03810 IPR007165 Membrane protein of unknown function RD08_RS03815 IPR000043 Adenosylhomocysteinase RD08_RS03815 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD08_RS03815 IPR016040 NAD(P)-binding domain RD08_RS03815 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site RD08_RS03820 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS03825 IPR010710 Protein of unknown function DUF1289 RD08_RS03830 IPR002133 S-adenosylmethionine synthetase RD08_RS03830 IPR022628 S-adenosylmethionine synthetase, N-terminal RD08_RS03830 IPR022629 S-adenosylmethionine synthetase, central domain RD08_RS03830 IPR022630 S-adenosylmethionine synthetase, C-terminal RD08_RS03830 IPR022631 S-adenosylmethionine synthetase, conserved site RD08_RS03830 IPR022636 S-adenosylmethionine synthetase superfamily RD08_RS03835 IPR004960 Bacterial lipid A biosynthesis acyltransferase RD08_RS03840 IPR004960 Bacterial lipid A biosynthesis acyltransferase RD08_RS03845 IPR001653 Diaminopimelate epimerase, DapF RD08_RS03845 IPR018510 Diaminopimelate epimerase, active site RD08_RS03850 IPR007435 Protein of unknown function DUF484 RD08_RS03855 IPR002104 Integrase, catalytic RD08_RS03855 IPR004107 Integrase, SAM-like, N-terminal RD08_RS03855 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD08_RS03855 IPR011931 Tyrosine recombinase XerC RD08_RS03855 IPR013762 Integrase-like, catalytic core RD08_RS03855 IPR023009 Tyrosine recombinase XerC/XerD RD08_RS03855 IPR023109 Integrase/recombinase, N-terminal RD08_RS03860 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS03860 IPR012910 TonB-dependent receptor, plug RD08_RS03865 IPR011541 Nickel/cobalt transporter, high-affinity RD08_RS03870 IPR010412 Protein of unknown function DUF1007 RD08_RS03875 IPR006127 Periplasmic solute binding protein family RD08_RS03875 IPR006128 Adhesion lipoprotein RD08_RS03875 IPR006129 Adhesin B RD08_RS03880 IPR001626 ABC-3 RD08_RS03880 IPR029022 ABC transporter, BtuC-like RD08_RS03885 IPR003439 ABC transporter-like RD08_RS03885 IPR003593 AAA+ ATPase domain RD08_RS03885 IPR017871 ABC transporter, conserved site RD08_RS03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03895 IPR002481 Ferric-uptake regulator RD08_RS03895 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03900 IPR003495 CobW/HypB/UreG domain RD08_RS03900 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RD08_RS03900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03905 IPR000962 Zinc finger, DksA/TraR C4-type RD08_RS03905 IPR012784 RNA polymerase-binding transcription factor DksA RD08_RS03905 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RD08_RS03910 IPR001353 Proteasome, subunit alpha/beta RD08_RS03910 IPR022281 ATP-dependent protease, HslV subunit RD08_RS03910 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS03915 IPR003593 AAA+ ATPase domain RD08_RS03915 IPR003959 ATPase, AAA-type, core RD08_RS03915 IPR004491 Heat shock protein HslU RD08_RS03915 IPR019489 Clp ATPase, C-terminal RD08_RS03915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS03920 IPR021647 Copper binding periplasmic protein CusF RD08_RS03925 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like RD08_RS03925 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RD08_RS03930 IPR001584 Integrase, catalytic core RD08_RS03930 IPR009057 Homeodomain-like RD08_RS03930 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03930 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03930 IPR012337 Ribonuclease H-like domain RD08_RS03930 IPR024967 DNA-binding domain, IS481-type RD08_RS03935 IPR001584 Integrase, catalytic core RD08_RS03935 IPR009057 Homeodomain-like RD08_RS03935 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03935 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03935 IPR012337 Ribonuclease H-like domain RD08_RS03935 IPR024967 DNA-binding domain, IS481-type RD08_RS03940 IPR003680 Flavodoxin-like fold RD08_RS03940 IPR029039 Flavoprotein-like RD08_RS03945 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD08_RS03945 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD08_RS03945 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS03945 IPR013328 Dehydrogenase, multihelical RD08_RS03945 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD08_RS03945 IPR016040 NAD(P)-binding domain RD08_RS03945 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD08_RS03950 IPR000101 Gamma-glutamyltranspeptidase RD08_RS03950 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS03955 IPR002823 Protein of unknown function DUF112, transmembrane RD08_RS03960 IPR009936 Protein of unknown function DUF1468 RD08_RS03965 IPR001584 Integrase, catalytic core RD08_RS03965 IPR009057 Homeodomain-like RD08_RS03965 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03965 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03965 IPR012337 Ribonuclease H-like domain RD08_RS03965 IPR024967 DNA-binding domain, IS481-type RD08_RS03975 IPR007838 Cell division protein ZapA-like RD08_RS03985 IPR001584 Integrase, catalytic core RD08_RS03985 IPR009057 Homeodomain-like RD08_RS03985 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS03985 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS03985 IPR012337 Ribonuclease H-like domain RD08_RS03985 IPR024967 DNA-binding domain, IS481-type RD08_RS03990 IPR007497 Protein of unknown function DUF541 RD08_RS03995 IPR001640 Prolipoprotein diacylglyceryl transferase RD08_RS04000 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RD08_RS04000 IPR004404 Dihydroxy-acid dehydratase RD08_RS04000 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS04000 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RD08_RS04005 IPR002324 Cytochrome c, class ID RD08_RS04005 IPR009056 Cytochrome c-like domain RD08_RS04010 IPR002569 Peptide methionine sulphoxide reductase MsrA RD08_RS04010 IPR028427 Peptide methionine sulfoxide reductase RD08_RS04015 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD08_RS04015 IPR005956 4-hydroxyphenylpyruvate dioxygenase RD08_RS04015 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS04020 IPR000485 AsnC-type HTH domain RD08_RS04020 IPR011008 Dimeric alpha-beta barrel RD08_RS04020 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04020 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS04020 IPR019888 Transcription regulator AsnC-type RD08_RS04055 IPR003121 SWIB/MDM2 domain RD08_RS04055 IPR019835 SWIB domain RD08_RS04060 IPR002933 Peptidase M20 RD08_RS04060 IPR011650 Peptidase M20, dimerisation domain RD08_RS04060 IPR017439 Amidohydrolase RD08_RS04065 IPR002195 Dihydroorotase, conserved site RD08_RS04065 IPR004721 Dihydroorotase homodimeric type RD08_RS04065 IPR006680 Amidohydrolase 1 RD08_RS04065 IPR032466 RD08_RS04065 RD08_RS04070 IPR003439 ABC transporter-like RD08_RS04070 IPR003593 AAA+ ATPase domain RD08_RS04070 IPR017871 ABC transporter, conserved site RD08_RS04070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS04070 IPR032524 RD08_RS04070 RD08_RS04070 IPR032781 RD08_RS04070 RD08_RS04080 IPR003444 MraZ RD08_RS04080 IPR020603 MraZ domain RD08_RS04085 IPR002903 Ribosomal RNA small subunit methyltransferase H RD08_RS04085 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain RD08_RS04085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS04090 IPR011922 Cell division protein FtsL RD08_RS04095 IPR001460 Penicillin-binding protein, transpeptidase RD08_RS04095 IPR005311 Penicillin-binding protein, dimerisation domain RD08_RS04095 IPR012338 Beta-lactamase/transpeptidase-like RD08_RS04100 IPR000713 Mur ligase, N-terminal RD08_RS04100 IPR004101 Mur ligase, C-terminal RD08_RS04100 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RD08_RS04100 IPR005863 UDP-MurNAc-pentapeptide synthetase RD08_RS04100 IPR013221 Mur ligase, central RD08_RS04100 IPR018109 Folylpolyglutamate synthetase, conserved site RD08_RS04105 IPR000715 Glycosyl transferase, family 4 RD08_RS04105 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RD08_RS04105 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RD08_RS04110 IPR004101 Mur ligase, C-terminal RD08_RS04110 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RD08_RS04110 IPR013221 Mur ligase, central RD08_RS04110 IPR016040 NAD(P)-binding domain RD08_RS04110 IPR018109 Folylpolyglutamate synthetase, conserved site RD08_RS04115 IPR001182 Cell cycle protein FtsW/RodA RD08_RS04115 IPR013437 Cell division protein FtsW RD08_RS04120 IPR004276 Glycosyl transferase, family 28 RD08_RS04120 IPR006009 N-acetylglucosaminyltransferase, MurG RD08_RS04120 IPR007235 Glycosyl transferase, family 28, C-terminal RD08_RS04125 IPR000713 Mur ligase, N-terminal RD08_RS04125 IPR004101 Mur ligase, C-terminal RD08_RS04125 IPR005758 UDP-N-acetylmuramate-alanine ligase RD08_RS04125 IPR013221 Mur ligase, central RD08_RS04125 IPR016040 NAD(P)-binding domain RD08_RS04130 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RD08_RS04130 IPR005905 D-alanine--D-alanine ligase RD08_RS04130 IPR011095 D-alanine--D-alanine ligase, C-terminal RD08_RS04130 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RD08_RS04130 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS04130 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS04130 IPR016185 Pre-ATP-grasp domain RD08_RS04135 IPR005548 Cell division protein FtsQ/DivIB RD08_RS04135 IPR013685 Polypeptide-transport-associated, FtsQ-type RD08_RS04135 IPR026579 Cell division protein FtsQ RD08_RS04140 IPR003494 SHS2 domain inserted in FtsA RD08_RS04140 IPR020823 Cell division protein FtsA RD08_RS04145 IPR000158 Cell division protein FtsZ RD08_RS04145 IPR003008 Tubulin/FtsZ, GTPase domain RD08_RS04145 IPR008280 Tubulin/FtsZ, C-terminal RD08_RS04145 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RD08_RS04145 IPR024757 Cell division protein FtsZ, C-terminal RD08_RS04150 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RD08_RS04150 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RD08_RS04150 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RD08_RS04150 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS04155 IPR021136 Flagellar hook-length control protein-like, C-terminal RD08_RS04160 IPR011055 Duplicated hybrid motif RD08_RS04160 IPR016047 Peptidase M23 RD08_RS04165 IPR000185 Protein translocase subunit SecA RD08_RS04165 IPR004027 SEC-C motif RD08_RS04165 IPR011115 SecA DEAD-like, N-terminal RD08_RS04165 IPR011116 SecA Wing/Scaffold RD08_RS04165 IPR011130 SecA preprotein, cross-linking domain RD08_RS04165 IPR020937 SecA conserved site RD08_RS04165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS04170 IPR025870 Glyoxalase-like domain RD08_RS04170 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS04175 IPR005064 Bordetella uptake gene RD08_RS04180 IPR010300 Cysteine dioxygenase type I RD08_RS04180 IPR011051 RmlC-like cupin domain RD08_RS04180 IPR014710 RmlC-like jelly roll fold RD08_RS04185 IPR002347 Glucose/ribitol dehydrogenase RD08_RS04185 IPR016040 NAD(P)-binding domain RD08_RS04190 IPR006076 FAD dependent oxidoreductase RD08_RS04190 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS04195 IPR000485 AsnC-type HTH domain RD08_RS04195 IPR011008 Dimeric alpha-beta barrel RD08_RS04195 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04195 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD08_RS04195 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS04195 IPR019888 Transcription regulator AsnC-type RD08_RS04200 IPR006840 ChaC-like protein RD08_RS04200 IPR013024 Butirosin biosynthesis, BtrG-like RD08_RS04205 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP RD08_RS04205 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RD08_RS04210 IPR001584 Integrase, catalytic core RD08_RS04210 IPR009057 Homeodomain-like RD08_RS04210 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS04210 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04210 IPR012337 Ribonuclease H-like domain RD08_RS04210 IPR024967 DNA-binding domain, IS481-type RD08_RS04215 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RD08_RS04215 IPR011342 Shikimate dehydrogenase RD08_RS04215 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RD08_RS04215 IPR016040 NAD(P)-binding domain RD08_RS04215 IPR022893 Shikimate, quinate/shikimate dehydrogenase RD08_RS04220 IPR006260 TonB, C-terminal RD08_RS04225 IPR012340 Nucleic acid-binding, OB-fold RD08_RS04230 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RD08_RS04230 IPR029058 Alpha/Beta hydrolase fold RD08_RS04235 IPR000713 Mur ligase, N-terminal RD08_RS04235 IPR004101 Mur ligase, C-terminal RD08_RS04235 IPR005757 Murein peptide ligase RD08_RS04235 IPR013221 Mur ligase, central RD08_RS04235 IPR016040 NAD(P)-binding domain RD08_RS04240 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD08_RS04240 IPR012336 Thioredoxin-like fold RD08_RS04240 IPR017937 Thioredoxin, conserved site RD08_RS04245 IPR001874 Dehydroquinase, class II RD08_RS04245 IPR018509 Dehydroquinase, class II, conserved site RD08_RS04250 IPR000089 Biotin/lipoyl attachment RD08_RS04250 IPR001249 Acetyl-CoA biotin carboxyl carrier RD08_RS04250 IPR001882 Biotin-binding site RD08_RS04250 IPR011053 Single hybrid motif RD08_RS04255 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RD08_RS04255 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD08_RS04255 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD08_RS04255 IPR005482 Biotin carboxylase, C-terminal RD08_RS04255 IPR011054 Rudiment single hybrid motif RD08_RS04255 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS04255 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS04255 IPR016185 Pre-ATP-grasp domain RD08_RS04260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS04265 IPR011723 Zinc finger/thioredoxin putative RD08_RS04265 IPR021834 Protein of unknown function DUF3426 RD08_RS04270 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RD08_RS04270 IPR011611 Carbohydrate kinase PfkB RD08_RS04270 IPR029056 Ribokinase-like RD08_RS04275 IPR008816 Glycine zipper 2TM domain RD08_RS04280 IPR009081 Acyl carrier protein-like RD08_RS04285 IPR006998 DltD, C-terminal RD08_RS04295 IPR004299 Membrane bound O-acyl transferase, MBOAT RD08_RS04295 IPR024024 D-alanyl transfer protein DltB RD08_RS04295 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB RD08_RS04300 IPR000873 AMP-dependent synthetase/ligase RD08_RS04300 IPR020845 AMP-binding, conserved site RD08_RS04305 IPR003425 Uncharacterised protein family Ycf19 RD08_RS04310 IPR009970 Histone H1-like nucleoprotein HC2 RD08_RS04315 IPR000358 Ribonucleotide reductase small subunit RD08_RS04315 IPR009078 Ferritin-like superfamily RD08_RS04315 IPR012348 Ribonucleotide reductase-related RD08_RS04320 IPR000788 Ribonucleotide reductase large subunit, C-terminal RD08_RS04320 IPR005144 ATP-cone RD08_RS04320 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RD08_RS04320 IPR013346 Ribonucleotide reductase, class I , alpha subunit RD08_RS04320 IPR013509 Ribonucleotide reductase large subunit, N-terminal RD08_RS04325 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain RD08_RS04325 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS04325 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain RD08_RS04325 IPR029061 Thiamin diphosphate-binding fold RD08_RS04335 IPR000485 AsnC-type HTH domain RD08_RS04335 IPR011008 Dimeric alpha-beta barrel RD08_RS04335 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04335 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS04335 IPR019888 Transcription regulator AsnC-type RD08_RS04345 IPR011701 Major facilitator superfamily RD08_RS04345 IPR020846 Major facilitator superfamily domain RD08_RS04350 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RD08_RS04350 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD08_RS04350 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RD08_RS04350 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RD08_RS04350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS04350 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RD08_RS04350 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RD08_RS04350 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RD08_RS04355 IPR000182 GNAT domain RD08_RS04355 IPR016102 Succinyl-CoA synthetase-like RD08_RS04355 IPR016181 Acyl-CoA N-acyltransferase RD08_RS04355 IPR032875 RD08_RS04355 RD08_RS04360 IPR001584 Integrase, catalytic core RD08_RS04360 IPR009057 Homeodomain-like RD08_RS04360 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS04360 IPR012337 Ribonuclease H-like domain RD08_RS04360 IPR024967 DNA-binding domain, IS481-type RD08_RS04365 IPR000524 Transcription regulator HTH, GntR RD08_RS04365 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS04365 IPR011711 GntR, C-terminal RD08_RS04365 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04375 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD08_RS04375 IPR001650 Helicase, C-terminal RD08_RS04375 IPR005580 DbpA, RNA-binding RD08_RS04375 IPR011545 DEAD/DEAH box helicase domain RD08_RS04375 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS04375 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS04380 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD08_RS04380 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS04385 IPR000868 Isochorismatase-like RD08_RS04390 IPR000515 MetI-like domain RD08_RS04395 IPR003439 ABC transporter-like RD08_RS04395 IPR003593 AAA+ ATPase domain RD08_RS04395 IPR017871 ABC transporter, conserved site RD08_RS04395 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS04405 IPR003140 Phospholipase/carboxylesterase/thioesterase RD08_RS04405 IPR029058 Alpha/Beta hydrolase fold RD08_RS04410 IPR006839 Ribosome-associated, YjgA RD08_RS04410 IPR023153 PSPTO4464-like domain RD08_RS04415 IPR002510 TldD/PmbA RD08_RS04420 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS04420 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD08_RS04425 IPR005822 Ribosomal protein L13 RD08_RS04425 IPR005823 Ribosomal protein L13, bacterial-type RD08_RS04425 IPR023564 Ribosomal protein L13 domain RD08_RS04430 IPR000754 Ribosomal protein S9 RD08_RS04430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS04430 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS04430 IPR020574 Ribosomal protein S9, conserved site RD08_RS04430 IPR023035 Ribosomal protein S9, bacterial/plastid RD08_RS04435 IPR000534 Semialdehyde dehydrogenase, NAD-binding RD08_RS04435 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RD08_RS04435 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RD08_RS04435 IPR016040 NAD(P)-binding domain RD08_RS04435 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RD08_RS04445 IPR000361 FeS cluster biogenesis RD08_RS04445 IPR016092 FeS cluster insertion protein RD08_RS04445 IPR017870 FeS cluster insertion, C-terminal, conserved site RD08_RS04445 IPR023063 Iron-sulfur cluster insertion protein ErpA RD08_RS04450 IPR005338 Anhydro-N-acetylmuramic acid kinase RD08_RS04455 IPR011055 Duplicated hybrid motif RD08_RS04455 IPR016047 Peptidase M23 RD08_RS04460 IPR001584 Integrase, catalytic core RD08_RS04460 IPR009057 Homeodomain-like RD08_RS04460 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS04460 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04460 IPR012337 Ribonuclease H-like domain RD08_RS04460 IPR024967 DNA-binding domain, IS481-type RD08_RS04465 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD08_RS04465 IPR002305 Aminoacyl-tRNA synthetase, class Ic RD08_RS04465 IPR002307 Tyrosine-tRNA ligase RD08_RS04465 IPR002942 RNA-binding S4 domain RD08_RS04465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS04465 IPR024088 Tyrosine-tRNA ligase, bacterial-type RD08_RS04465 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 RD08_RS04470 IPR005247 YbhB/YbcL RD08_RS04470 IPR008914 Phosphatidylethanolamine-binding protein PEBP RD08_RS04475 IPR001085 Serine hydroxymethyltransferase RD08_RS04475 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS04475 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS04475 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS04475 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RD08_RS04480 IPR003796 Ribonucleotide reductase regulator NrdR-like RD08_RS04480 IPR005144 ATP-cone RD08_RS04485 IPR002818 ThiJ/PfpI RD08_RS04485 IPR029062 Class I glutamine amidotransferase-like RD08_RS04490 IPR000868 Isochorismatase-like RD08_RS04495 IPR002125 CMP/dCMP deaminase, zinc-binding RD08_RS04495 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RD08_RS04495 IPR004794 Riboflavin biosynthesis protein RibD RD08_RS04495 IPR011549 Riboflavin-specific deaminase, C-terminal RD08_RS04495 IPR016192 APOBEC/CMP deaminase, zinc-binding RD08_RS04495 IPR016193 Cytidine deaminase-like RD08_RS04495 IPR024072 Dihydrofolate reductase-like domain RD08_RS04500 IPR001584 Integrase, catalytic core RD08_RS04500 IPR009057 Homeodomain-like RD08_RS04500 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS04500 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04500 IPR012337 Ribonuclease H-like domain RD08_RS04500 IPR024967 DNA-binding domain, IS481-type RD08_RS04510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS04510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS04515 IPR029069 HotDog domain RD08_RS04520 IPR005064 Bordetella uptake gene RD08_RS04525 IPR000847 Transcription regulator HTH, LysR RD08_RS04525 IPR005119 LysR, substrate-binding RD08_RS04525 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04530 IPR003673 CoA-transferase family III RD08_RS04530 IPR023606 CoA-transferase family III domain RD08_RS04535 IPR011701 Major facilitator superfamily RD08_RS04535 IPR020846 Major facilitator superfamily domain RD08_RS04540 IPR000847 Transcription regulator HTH, LysR RD08_RS04540 IPR005119 LysR, substrate-binding RD08_RS04540 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04550 IPR003829 Pirin, N-terminal domain RD08_RS04550 IPR008778 Pirin, C-terminal domain RD08_RS04550 IPR011051 RmlC-like cupin domain RD08_RS04550 IPR012093 Pirin RD08_RS04550 IPR014710 RmlC-like jelly roll fold RD08_RS04555 IPR025714 Methyltransferase domain RD08_RS04555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS04560 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS04560 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS04560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS04565 IPR001789 Signal transduction response regulator, receiver domain RD08_RS04565 IPR002197 DNA binding HTH domain, Fis-type RD08_RS04565 IPR009057 Homeodomain-like RD08_RS04565 IPR011006 CheY-like superfamily RD08_RS04570 IPR002429 Cytochrome c oxidase subunit II C-terminal RD08_RS04570 IPR006333 Cytochrome o ubiquinol oxidase subunit II RD08_RS04570 IPR008972 Cupredoxin RD08_RS04570 IPR010514 COX aromatic rich motif RD08_RS04570 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RD08_RS04575 IPR000883 Cytochrome c oxidase subunit I RD08_RS04575 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RD08_RS04575 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD08_RS04575 IPR023616 Cytochrome c oxidase, subunit I domain RD08_RS04580 IPR000298 Cytochrome c oxidase subunit III domain RD08_RS04580 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD08_RS04580 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RD08_RS04580 IPR024791 Cytochrome c oxidase subunit III RD08_RS04585 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RD08_RS04585 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RD08_RS04590 IPR001845 HTH ArsR-type DNA-binding domain RD08_RS04590 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04600 IPR032808 RD08_RS04600 RD08_RS04605 IPR018640 Protein of unknown function DUF2063 RD08_RS04610 IPR007801 Uncharacterised protein family UPF0276 RD08_RS04610 IPR013022 Xylose isomerase-like, TIM barrel domain RD08_RS04615 IPR018740 Protein of unknown function DUF2282, integral membrane RD08_RS04620 IPR021333 Protein of unknown function DUF2946 RD08_RS04625 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS04625 IPR012910 TonB-dependent receptor, plug RD08_RS04630 IPR005625 PepSY-associated TM helix RD08_RS04635 IPR003370 Chromate transporter RD08_RS04635 IPR014047 Chromate transporter, long chain RD08_RS04640 IPR011055 Duplicated hybrid motif RD08_RS04640 IPR016047 Peptidase M23 RD08_RS04640 IPR018392 LysM domain RD08_RS04645 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS04650 IPR008457 Copper resistance D RD08_RS04655 IPR007551 Protein of unknown function DUF520 RD08_RS04660 IPR005297 Lipoprotein repeat RD08_RS04660 IPR014558 Uncharacterised conserved lipoprotein RD08_RS04665 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS04665 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04665 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD08_RS04665 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS04665 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS04665 IPR014284 RNA polymerase sigma-70 like domain RD08_RS04675 IPR001584 Integrase, catalytic core RD08_RS04675 IPR009057 Homeodomain-like RD08_RS04675 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS04675 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04675 IPR012337 Ribonuclease H-like domain RD08_RS04675 IPR024967 DNA-binding domain, IS481-type RD08_RS04680 IPR001801 Histone-like protein H-NS RD08_RS04680 IPR027444 Histone-like protein H-NS, C-terminal domain RD08_RS04685 IPR001110 Uncharacterised protein family UPF0012, conserved site RD08_RS04685 IPR003010 Carbon-nitrogen hydrolase RD08_RS04690 IPR002510 TldD/PmbA RD08_RS04690 IPR025502 TldD RD08_RS04695 IPR006218 DAHP synthetase I/KDSA RD08_RS04695 IPR006219 DHAP synthase, class 1 RD08_RS04695 IPR013785 Aldolase-type TIM barrel RD08_RS04700 IPR008638 Filamentous haemagglutinin, N-terminal RD08_RS04700 IPR011050 Pectin lyase fold/virulence factor RD08_RS04700 IPR012334 Pectin lyase fold RD08_RS04700 IPR020974 Peptidase C80, RTX cysteine protease domain RD08_RS04700 IPR025157 Haemagluttinin repeat RD08_RS04705 IPR004113 FAD-linked oxidase, C-terminal RD08_RS04705 IPR006094 FAD linked oxidase, N-terminal RD08_RS04705 IPR016164 FAD-linked oxidase-like, C-terminal RD08_RS04705 IPR016166 FAD-binding, type 2 RD08_RS04705 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS04705 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS04705 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD08_RS04710 IPR004113 FAD-linked oxidase, C-terminal RD08_RS04710 IPR006094 FAD linked oxidase, N-terminal RD08_RS04710 IPR016164 FAD-linked oxidase-like, C-terminal RD08_RS04710 IPR016166 FAD-binding, type 2 RD08_RS04710 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS04710 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS04710 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD08_RS04715 IPR006094 FAD linked oxidase, N-terminal RD08_RS04715 IPR016164 FAD-linked oxidase-like, C-terminal RD08_RS04715 IPR016166 FAD-binding, type 2 RD08_RS04715 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS04715 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD08_RS04720 IPR004017 Cysteine-rich domain RD08_RS04720 IPR009051 Alpha-helical ferredoxin RD08_RS04720 IPR012257 Glycolate oxidase, iron-sulphur subunit RD08_RS04720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD08_RS04720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS04725 IPR000801 Putative esterase RD08_RS04725 IPR029058 Alpha/Beta hydrolase fold RD08_RS04730 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS04730 IPR010105 TonB-dependent siderophore receptor RD08_RS04730 IPR010917 TonB-dependent receptor, conserved site RD08_RS04730 IPR012910 TonB-dependent receptor, plug RD08_RS04735 IPR009057 Homeodomain-like RD08_RS04735 IPR018060 DNA binding HTH domain, AraC-type RD08_RS04735 IPR018062 HTH domain AraC-type, conserved site RD08_RS04735 IPR020449 Transcription regulator HTH, AraC- type RD08_RS04740 IPR012136 NADP transhydrogenase, beta subunit RD08_RS04740 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS04745 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RD08_RS04745 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RD08_RS04745 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RD08_RS04745 IPR016040 NAD(P)-binding domain RD08_RS04750 IPR002508 Cell wall hydrolase/autolysin, catalytic RD08_RS04750 IPR007709 N-formylglutamate amidohydrolase RD08_RS04755 IPR005064 Bordetella uptake gene RD08_RS04760 IPR000847 Transcription regulator HTH, LysR RD08_RS04760 IPR005119 LysR, substrate-binding RD08_RS04760 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04765 IPR004506 tRNA-specific 2-thiouridylase RD08_RS04765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS04765 IPR023382 Adenine nucleotide alpha hydrolase-like domains RD08_RS04770 IPR002781 Transmembrane protein TauE like RD08_RS04775 IPR004045 Glutathione S-transferase, N-terminal RD08_RS04775 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS04775 IPR012336 Thioredoxin-like fold RD08_RS04780 IPR000362 Fumarate lyase family RD08_RS04780 IPR004769 Adenylosuccinate lyase RD08_RS04780 IPR008948 L-Aspartase-like RD08_RS04780 IPR013539 Adenylosuccinate lyase PurB, C-terminal RD08_RS04780 IPR020557 Fumarate lyase, conserved site RD08_RS04780 IPR022761 Fumarate lyase, N-terminal RD08_RS04780 IPR024083 Fumarase/histidase, N-terminal RD08_RS04785 IPR002321 Cytochrome c, class II RD08_RS04785 IPR010980 Cytochrome c/b562 RD08_RS04785 IPR012127 Cytochrome c prime RD08_RS04785 IPR015984 Cytochrome c prime, subgroup RD08_RS04790 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RD08_RS04790 IPR016174 Di-haem cytochrome, transmembrane RD08_RS04800 IPR021413 Protein of unknown function DUF3053 RD08_RS04805 IPR002549 Uncharacterised protein family UPF0118 RD08_RS04810 IPR001584 Integrase, catalytic core RD08_RS04810 IPR009057 Homeodomain-like RD08_RS04810 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS04810 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04810 IPR012337 Ribonuclease H-like domain RD08_RS04810 IPR024967 DNA-binding domain, IS481-type RD08_RS04815 IPR000524 Transcription regulator HTH, GntR RD08_RS04815 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS04815 IPR011711 GntR, C-terminal RD08_RS04815 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04825 IPR000120 Amidase RD08_RS04825 IPR023631 Amidase signature domain RD08_RS04830 IPR003673 CoA-transferase family III RD08_RS04830 IPR023606 CoA-transferase family III domain RD08_RS04835 IPR001753 Crotonase superfamily RD08_RS04835 IPR014748 Crontonase, C-terminal RD08_RS04835 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS04835 IPR029045 ClpP/crotonase-like domain RD08_RS04845 IPR015168 SsuA/THI5-like RD08_RS04850 IPR000515 MetI-like domain RD08_RS04855 IPR003439 ABC transporter-like RD08_RS04855 IPR003593 AAA+ ATPase domain RD08_RS04855 IPR017871 ABC transporter, conserved site RD08_RS04855 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS04860 IPR002509 Polysaccharide deacetylase RD08_RS04860 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD08_RS04865 IPR002347 Glucose/ribitol dehydrogenase RD08_RS04865 IPR016040 NAD(P)-binding domain RD08_RS04870 IPR005471 Transcription regulator IclR, N-terminal RD08_RS04870 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04870 IPR014757 Transcription regulator IclR, C-terminal RD08_RS04870 IPR029016 GAF domain-like RD08_RS04880 IPR000873 AMP-dependent synthetase/ligase RD08_RS04880 IPR020845 AMP-binding, conserved site RD08_RS04880 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS04885 IPR006175 YjgF/Yer057p/UK114 family RD08_RS04885 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS04890 IPR001851 ABC transporter, permease RD08_RS04895 IPR001851 ABC transporter, permease RD08_RS04905 IPR003439 ABC transporter-like RD08_RS04905 IPR003593 AAA+ ATPase domain RD08_RS04905 IPR017871 ABC transporter, conserved site RD08_RS04905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS04910 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD08_RS04910 IPR013785 Aldolase-type TIM barrel RD08_RS04915 IPR001584 Integrase, catalytic core RD08_RS04915 IPR009057 Homeodomain-like RD08_RS04915 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS04915 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04915 IPR012337 Ribonuclease H-like domain RD08_RS04915 IPR024967 DNA-binding domain, IS481-type RD08_RS04920 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD08_RS04920 IPR013785 Aldolase-type TIM barrel RD08_RS04925 IPR000847 Transcription regulator HTH, LysR RD08_RS04925 IPR005119 LysR, substrate-binding RD08_RS04925 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04930 IPR002110 Ankyrin repeat RD08_RS04930 IPR020683 Ankyrin repeat-containing domain RD08_RS04935 IPR002125 CMP/dCMP deaminase, zinc-binding RD08_RS04935 IPR016193 Cytidine deaminase-like RD08_RS04940 IPR011701 Major facilitator superfamily RD08_RS04940 IPR020846 Major facilitator superfamily domain RD08_RS04945 IPR000847 Transcription regulator HTH, LysR RD08_RS04945 IPR005119 LysR, substrate-binding RD08_RS04945 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04955 IPR001584 Integrase, catalytic core RD08_RS04955 IPR009057 Homeodomain-like RD08_RS04955 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS04955 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04955 IPR012337 Ribonuclease H-like domain RD08_RS04955 IPR024967 DNA-binding domain, IS481-type RD08_RS04960 IPR000120 Amidase RD08_RS04960 IPR023631 Amidase signature domain RD08_RS04965 IPR001783 Lumazine-binding protein RD08_RS04965 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS04965 IPR023366 ATP synthase subunit alpha-like domain RD08_RS04965 IPR026017 Lumazine-binding domain RD08_RS04970 IPR005064 Bordetella uptake gene RD08_RS04975 IPR000485 AsnC-type HTH domain RD08_RS04975 IPR011008 Dimeric alpha-beta barrel RD08_RS04975 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS04975 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS04975 IPR019888 Transcription regulator AsnC-type RD08_RS04980 IPR010300 Cysteine dioxygenase type I RD08_RS04980 IPR011051 RmlC-like cupin domain RD08_RS04980 IPR014710 RmlC-like jelly roll fold RD08_RS04985 IPR000873 AMP-dependent synthetase/ligase RD08_RS04985 IPR020845 AMP-binding, conserved site RD08_RS04985 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS04990 IPR021259 Protein of unknown function DUF2817 RD08_RS04995 IPR000515 MetI-like domain RD08_RS05000 IPR003439 ABC transporter-like RD08_RS05000 IPR003593 AAA+ ATPase domain RD08_RS05000 IPR017871 ABC transporter, conserved site RD08_RS05000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05010 IPR003736 Phenylacetic acid degradation-related domain RD08_RS05010 IPR006683 Thioesterase superfamily RD08_RS05010 IPR029069 HotDog domain RD08_RS05015 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS05015 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD08_RS05015 IPR011032 GroES (chaperonin 10)-like RD08_RS05015 IPR013149 Alcohol dehydrogenase, C-terminal RD08_RS05015 IPR013154 Alcohol dehydrogenase GroES-like RD08_RS05015 IPR016040 NAD(P)-binding domain RD08_RS05015 IPR020843 Polyketide synthase, enoylreductase RD08_RS05020 IPR025870 Glyoxalase-like domain RD08_RS05020 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS05025 IPR008579 Domain of unknown function DUF861, cupin-3 RD08_RS05025 IPR011051 RmlC-like cupin domain RD08_RS05025 IPR014710 RmlC-like jelly roll fold RD08_RS05030 IPR001584 Integrase, catalytic core RD08_RS05030 IPR009057 Homeodomain-like RD08_RS05030 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05030 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05030 IPR012337 Ribonuclease H-like domain RD08_RS05030 IPR024967 DNA-binding domain, IS481-type RD08_RS05035 IPR001757 Cation-transporting P-type ATPase RD08_RS05035 IPR006121 Heavy metal-associated domain, HMA RD08_RS05035 IPR006122 Heavy metal-associated domain, copper ion-binding RD08_RS05035 IPR008250 P-type ATPase, A domain RD08_RS05035 IPR017969 Heavy-metal-associated, conserved site RD08_RS05035 IPR018303 P-type ATPase, phosphorylation site RD08_RS05035 IPR023214 HAD-like domain RD08_RS05035 IPR023299 P-type ATPase, cytoplasmic domain N RD08_RS05035 IPR027256 Cation-transporting P-type ATPase, subfamily IB RD08_RS05040 IPR003607 HD/PDEase domain RD08_RS05040 IPR006674 HD domain RD08_RS05045 IPR000796 Aspartate/other aminotransferase RD08_RS05045 IPR004839 Aminotransferase, class I/classII RD08_RS05045 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS05045 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS05050 IPR000847 Transcription regulator HTH, LysR RD08_RS05050 IPR005119 LysR, substrate-binding RD08_RS05050 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05055 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS05055 IPR029058 Alpha/Beta hydrolase fold RD08_RS05060 IPR011701 Major facilitator superfamily RD08_RS05060 IPR020846 Major facilitator superfamily domain RD08_RS05065 IPR002347 Glucose/ribitol dehydrogenase RD08_RS05065 IPR016040 NAD(P)-binding domain RD08_RS05065 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS05070 IPR002347 Glucose/ribitol dehydrogenase RD08_RS05070 IPR016040 NAD(P)-binding domain RD08_RS05070 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS05075 IPR001584 Integrase, catalytic core RD08_RS05075 IPR009057 Homeodomain-like RD08_RS05075 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05075 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05075 IPR012337 Ribonuclease H-like domain RD08_RS05075 IPR024967 DNA-binding domain, IS481-type RD08_RS05080 IPR001702 Porin, Gram-negative type RD08_RS05080 IPR002299 Porin, Neisseria sp. type RD08_RS05080 IPR023614 Porin domain RD08_RS05085 IPR003700 Ketopantoate hydroxymethyltransferase RD08_RS05085 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS05090 IPR000847 Transcription regulator HTH, LysR RD08_RS05090 IPR005119 LysR, substrate-binding RD08_RS05090 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05095 IPR001584 Integrase, catalytic core RD08_RS05095 IPR009057 Homeodomain-like RD08_RS05095 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05095 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05095 IPR012337 Ribonuclease H-like domain RD08_RS05095 IPR024967 DNA-binding domain, IS481-type RD08_RS05110 IPR001584 Integrase, catalytic core RD08_RS05110 IPR009057 Homeodomain-like RD08_RS05110 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05110 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05110 IPR012337 Ribonuclease H-like domain RD08_RS05110 IPR024967 DNA-binding domain, IS481-type RD08_RS05130 IPR002347 Glucose/ribitol dehydrogenase RD08_RS05130 IPR016040 NAD(P)-binding domain RD08_RS05135 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS05135 IPR009057 Homeodomain-like RD08_RS05135 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS05135 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS05135 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD08_RS05140 IPR001584 Integrase, catalytic core RD08_RS05140 IPR009057 Homeodomain-like RD08_RS05140 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05140 IPR012337 Ribonuclease H-like domain RD08_RS05140 IPR024967 DNA-binding domain, IS481-type RD08_RS05145 IPR007844 AsmA RD08_RS05150 IPR005019 Methyladenine glycosylase RD08_RS05150 IPR011257 DNA glycosylase RD08_RS05155 IPR000551 MerR-type HTH domain RD08_RS05155 IPR009061 DNA binding domain, putative RD08_RS05155 IPR010211 Redox-sensitive transcriptional activator SoxR RD08_RS05155 IPR015358 Transcription regulator MerR, DNA binding RD08_RS05165 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05165 IPR029016 GAF domain-like RD08_RS05175 IPR001584 Integrase, catalytic core RD08_RS05175 IPR009057 Homeodomain-like RD08_RS05175 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05175 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05175 IPR012337 Ribonuclease H-like domain RD08_RS05175 IPR024967 DNA-binding domain, IS481-type RD08_RS05180 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS05185 IPR003439 ABC transporter-like RD08_RS05185 IPR003593 AAA+ ATPase domain RD08_RS05185 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS05185 IPR017871 ABC transporter, conserved site RD08_RS05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05190 IPR000515 MetI-like domain RD08_RS05195 IPR000515 MetI-like domain RD08_RS05200 IPR005656 MmgE/PrpD RD08_RS05205 IPR005656 MmgE/PrpD RD08_RS05215 IPR001584 Integrase, catalytic core RD08_RS05215 IPR009057 Homeodomain-like RD08_RS05215 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05215 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05215 IPR012337 Ribonuclease H-like domain RD08_RS05215 IPR024967 DNA-binding domain, IS481-type RD08_RS05220 IPR005064 Bordetella uptake gene RD08_RS05225 IPR000524 Transcription regulator HTH, GntR RD08_RS05225 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS05225 IPR011711 GntR, C-terminal RD08_RS05225 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05230 IPR007506 Domain of unknown function DUF521 RD08_RS05235 IPR002840 Domain of unknown function DUF126 RD08_RS05235 IPR008279 PEP-utilising enzyme, mobile domain RD08_RS05235 IPR012016 Uncharacterised protein family UPF0107 RD08_RS05235 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS05240 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD08_RS05240 IPR011008 Dimeric alpha-beta barrel RD08_RS05245 IPR001584 Integrase, catalytic core RD08_RS05245 IPR009057 Homeodomain-like RD08_RS05245 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05245 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05245 IPR012337 Ribonuclease H-like domain RD08_RS05245 IPR024967 DNA-binding domain, IS481-type RD08_RS05250 IPR001670 Alcohol dehydrogenase, iron-type RD08_RS05250 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RD08_RS05255 IPR001584 Integrase, catalytic core RD08_RS05255 IPR009057 Homeodomain-like RD08_RS05255 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05255 IPR012337 Ribonuclease H-like domain RD08_RS05255 IPR024967 DNA-binding domain, IS481-type RD08_RS05265 IPR004872 Lipoprotein NlpA family RD08_RS05270 IPR000515 MetI-like domain RD08_RS05275 IPR003439 ABC transporter-like RD08_RS05275 IPR003593 AAA+ ATPase domain RD08_RS05275 IPR017871 ABC transporter, conserved site RD08_RS05275 IPR018449 NIL domain RD08_RS05275 IPR026253 Methionine import ATP-binding protein MetN RD08_RS05275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05280 IPR000322 Glycoside hydrolase, family 31 RD08_RS05280 IPR011013 Galactose mutarotase-like domain RD08_RS05280 IPR017853 Glycoside hydrolase, superfamily RD08_RS05290 IPR000760 Inositol monophosphatase RD08_RS05290 IPR020550 Inositol monophosphatase, conserved site RD08_RS05290 IPR020583 Inositol monophosphatase, metal-binding site RD08_RS05290 IPR022337 Inositol monophosphatase, SuhB RD08_RS05295 IPR001584 Integrase, catalytic core RD08_RS05295 IPR009057 Homeodomain-like RD08_RS05295 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05295 IPR012337 Ribonuclease H-like domain RD08_RS05295 IPR024967 DNA-binding domain, IS481-type RD08_RS05300 IPR000873 AMP-dependent synthetase/ligase RD08_RS05300 IPR020845 AMP-binding, conserved site RD08_RS05300 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS05305 IPR002933 Peptidase M20 RD08_RS05305 IPR011650 Peptidase M20, dimerisation domain RD08_RS05305 IPR017439 Amidohydrolase RD08_RS05310 IPR000847 Transcription regulator HTH, LysR RD08_RS05310 IPR005119 LysR, substrate-binding RD08_RS05310 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05315 IPR004630 Uncharacterised protein family UPF0324, bacteria RD08_RS05315 IPR018383 Uncharacterised protein family UPF0324, prokaryote RD08_RS05320 IPR006683 Thioesterase superfamily RD08_RS05320 IPR029069 HotDog domain RD08_RS05325 IPR000644 CBS domain RD08_RS05325 IPR006667 SLC41 divalent cation transporters, integral membrane domain RD08_RS05325 IPR006668 Magnesium transporter, MgtE intracellular domain RD08_RS05325 IPR006669 Magnesium transporter MgtE RD08_RS05330 IPR001584 Integrase, catalytic core RD08_RS05330 IPR009057 Homeodomain-like RD08_RS05330 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05330 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05330 IPR012337 Ribonuclease H-like domain RD08_RS05330 IPR024967 DNA-binding domain, IS481-type RD08_RS05335 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD08_RS05335 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS05340 IPR002656 Acyltransferase 3 RD08_RS05345 IPR005064 Bordetella uptake gene RD08_RS05350 IPR005471 Transcription regulator IclR, N-terminal RD08_RS05350 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05350 IPR014757 Transcription regulator IclR, C-terminal RD08_RS05350 IPR029016 GAF domain-like RD08_RS05355 IPR003761 Exonuclease VII, small subunit RD08_RS05360 IPR000092 Polyprenyl synthetase RD08_RS05360 IPR008949 Terpenoid synthase RD08_RS05360 IPR017446 Polyprenyl synthetase-related RD08_RS05365 IPR005474 Transketolase, N-terminal RD08_RS05365 IPR005475 Transketolase-like, pyrimidine-binding domain RD08_RS05365 IPR005477 Deoxyxylulose-5-phosphate synthase RD08_RS05365 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD08_RS05365 IPR020826 Transketolase binding site RD08_RS05365 IPR029061 Thiamin diphosphate-binding fold RD08_RS05365 IPR033247 RD08_RS05365 RD08_RS05365 IPR033248 RD08_RS05365 RD08_RS05370 IPR003801 GTP cyclohydrolase FolE2/MptA RD08_RS05370 IPR022838 GTP cyclohydrolase FolE2 RD08_RS05375 IPR000529 Ribosomal protein S6 RD08_RS05375 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RD08_RS05375 IPR020814 Ribosomal protein S6, plastid/chloroplast RD08_RS05380 IPR012340 Nucleic acid-binding, OB-fold RD08_RS05380 IPR023646 Primosomal replication protein PriB RD08_RS05385 IPR001648 Ribosomal protein S18 RD08_RS05385 IPR018275 Ribosomal protein S18, conserved site RD08_RS05390 IPR000244 Ribosomal protein L9 RD08_RS05390 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RD08_RS05390 IPR020069 Ribosomal protein L9, C-terminal RD08_RS05390 IPR020070 Ribosomal protein L9, N-terminal RD08_RS05390 IPR020594 Ribosomal protein L9, bacteria/chloroplast RD08_RS05395 IPR011009 Protein kinase-like domain RD08_RS05400 IPR003593 AAA+ ATPase domain RD08_RS05400 IPR007692 DNA helicase, DnaB type RD08_RS05400 IPR007693 DNA helicase, DnaB-like, N-terminal RD08_RS05400 IPR007694 DNA helicase, DnaB-like, C-terminal RD08_RS05400 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RD08_RS05400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05405 IPR016833 Putative sodium bile acid cotransporter RD08_RS05410 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA RD08_RS05410 IPR024084 Isopropylmalate dehydrogenase-like domain RD08_RS05415 IPR002716 PIN domain RD08_RS05415 IPR003714 PhoH-like protein RD08_RS05415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05415 IPR029060 PIN domain-like RD08_RS05420 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD08_RS05420 IPR012336 Thioredoxin-like fold RD08_RS05420 IPR024706 Peroxiredoxin, AhpC-type RD08_RS05425 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 RD08_RS05430 IPR004839 Aminotransferase, class I/classII RD08_RS05430 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS05430 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS05430 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS05435 IPR001342 Homoserine dehydrogenase, catalytic RD08_RS05435 IPR002912 ACT domain RD08_RS05435 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD08_RS05435 IPR016040 NAD(P)-binding domain RD08_RS05435 IPR016204 Homoserine dehydrogenase RD08_RS05435 IPR019811 Homoserine dehydrogenase, conserved site RD08_RS05440 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD08_RS05440 IPR004450 Threonine synthase-like RD08_RS05440 IPR029144 Threonine synthase, N-terminal RD08_RS05445 IPR010305 Protein of unknown function DUF903 RD08_RS05445 IPR010920 Like-Sm (LSM) domain RD08_RS05450 IPR001584 Integrase, catalytic core RD08_RS05450 IPR009057 Homeodomain-like RD08_RS05450 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05450 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05450 IPR012337 Ribonuclease H-like domain RD08_RS05450 IPR024967 DNA-binding domain, IS481-type RD08_RS05455 IPR003767 Malate/L-lactate dehydrogenase RD08_RS05465 IPR005064 Bordetella uptake gene RD08_RS05470 IPR001584 Integrase, catalytic core RD08_RS05470 IPR009057 Homeodomain-like RD08_RS05470 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05470 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05470 IPR012337 Ribonuclease H-like domain RD08_RS05470 IPR024967 DNA-binding domain, IS481-type RD08_RS05480 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD08_RS05480 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS05480 IPR017648 2-dehydro-3-deoxyglucarate aldolase, GarL RD08_RS05485 IPR002583 Ribosomal protein S20 RD08_RS05490 IPR006860 FecR protein RD08_RS05490 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD08_RS05490 IPR032623 RD08_RS05490 RD08_RS05495 IPR004268 Flagellin assembly, membrane protein MviN RD08_RS05500 IPR002347 Glucose/ribitol dehydrogenase RD08_RS05500 IPR016040 NAD(P)-binding domain RD08_RS05500 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS05505 IPR000850 Adenylate kinase/UMP-CMP kinase RD08_RS05505 IPR006259 Adenylate kinase subfamily RD08_RS05505 IPR007862 Adenylate kinase, active site lid domain RD08_RS05505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05510 IPR003329 Acylneuraminate cytidylyltransferase RD08_RS05510 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RD08_RS05510 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS05515 IPR005651 Uncharacterised protein family UPF0434/Trm112 RD08_RS05520 IPR003758 Tetraacyldisaccharide 4'-kinase RD08_RS05520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05525 IPR003400 Biopolymer transport protein ExbD/TolR RD08_RS05530 IPR002898 MotA/TolQ/ExbB proton channel RD08_RS05535 IPR001584 Integrase, catalytic core RD08_RS05535 IPR009057 Homeodomain-like RD08_RS05535 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05535 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05535 IPR012337 Ribonuclease H-like domain RD08_RS05535 IPR024967 DNA-binding domain, IS481-type RD08_RS05540 IPR003753 Exonuclease VII, large subunit RD08_RS05540 IPR020579 Exonuclease VII, large subunit, C-terminal RD08_RS05540 IPR025824 OB-fold nucleic acid binding domain RD08_RS05545 IPR001189 Manganese/iron superoxide dismutase RD08_RS05545 IPR019831 Manganese/iron superoxide dismutase, N-terminal RD08_RS05545 IPR019832 Manganese/iron superoxide dismutase, C-terminal RD08_RS05545 IPR019833 Manganese/iron superoxide dismutase, binding site RD08_RS05550 IPR001807 Chloride channel, voltage gated RD08_RS05550 IPR014743 Chloride channel, core RD08_RS05555 IPR002155 Thiolase RD08_RS05555 IPR012793 Beta-ketoadipyl CoA thiolase RD08_RS05555 IPR016039 Thiolase-like RD08_RS05555 IPR020610 Thiolase, active site RD08_RS05555 IPR020613 Thiolase, conserved site RD08_RS05555 IPR020615 Thiolase, acyl-enzyme intermediate active site RD08_RS05555 IPR020616 Thiolase, N-terminal RD08_RS05555 IPR020617 Thiolase, C-terminal RD08_RS05560 IPR003795 Protein of unknown function DUF192 RD08_RS05565 IPR002059 Cold-shock protein, DNA-binding RD08_RS05565 IPR011129 Cold shock protein RD08_RS05565 IPR012156 Cold shock, CspA RD08_RS05565 IPR012340 Nucleic acid-binding, OB-fold RD08_RS05565 IPR019844 Cold-shock conserved site RD08_RS05570 IPR003769 Adaptor protein ClpS, core RD08_RS05570 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RD08_RS05570 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RD08_RS05575 IPR001599 Alpha-2-macroglobulin RD08_RS05575 IPR002890 Alpha-2-macroglobulin, N-terminal RD08_RS05575 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RD08_RS05575 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RD08_RS05575 IPR011626 Alpha-macroglobulin complement component RD08_RS05575 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming RD08_RS05575 IPR021868 Alpha-2-macroglobulin MG1 domain RD08_RS05575 IPR026284 Alpha-2-macroglobulin domain protein, bacteria RD08_RS05580 IPR001264 Glycosyl transferase, family 51 RD08_RS05580 IPR001460 Penicillin-binding protein, transpeptidase RD08_RS05580 IPR009647 Penicillin-binding, C-terminal RD08_RS05580 IPR011815 Penicillin-binding protein 1C RD08_RS05580 IPR012338 Beta-lactamase/transpeptidase-like RD08_RS05580 IPR023346 Lysozyme-like domain RD08_RS05585 IPR001270 ClpA/B family RD08_RS05585 IPR003593 AAA+ ATPase domain RD08_RS05585 IPR003959 ATPase, AAA-type, core RD08_RS05585 IPR004176 Clp, N-terminal RD08_RS05585 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA RD08_RS05585 IPR018368 ClpA/B, conserved site 1 RD08_RS05585 IPR019489 Clp ATPase, C-terminal RD08_RS05585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05585 IPR028299 ClpA/B, conserved site 2 RD08_RS05590 IPR005219 Conserved hypothetical protein CHP00155 RD08_RS05590 IPR007498 Paraquat-inducible protein A RD08_RS05595 IPR003399 Mammalian cell entry-related RD08_RS05600 IPR005586 Protein of unknown function DUF330 RD08_RS05605 IPR002872 Proline dehydrogenase domain RD08_RS05605 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 RD08_RS05605 IPR010985 Ribbon-helix-helix RD08_RS05605 IPR015590 Aldehyde dehydrogenase domain RD08_RS05605 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS05605 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS05605 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS05605 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS05605 IPR024082 Proline dehydrogenase PutA, domain II RD08_RS05605 IPR024089 Proline dehydrogenase PutA, domain I/II RD08_RS05605 IPR024090 Proline dehydrogenase PutA, domain I RD08_RS05605 IPR025703 Bifunctional protein PutA RD08_RS05605 IPR029041 FAD-linked oxidoreductase-like RD08_RS05610 IPR001584 Integrase, catalytic core RD08_RS05610 IPR009057 Homeodomain-like RD08_RS05610 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05610 IPR012337 Ribonuclease H-like domain RD08_RS05610 IPR024967 DNA-binding domain, IS481-type RD08_RS05615 IPR000709 Leu/Ile/Val-binding protein RD08_RS05615 IPR028081 Leucine-binding protein domain RD08_RS05615 IPR028082 Periplasmic binding protein-like I RD08_RS05620 IPR001851 ABC transporter, permease RD08_RS05625 IPR001851 ABC transporter, permease RD08_RS05630 IPR003439 ABC transporter-like RD08_RS05630 IPR003593 AAA+ ATPase domain RD08_RS05630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05630 IPR032823 RD08_RS05630 RD08_RS05635 IPR003439 ABC transporter-like RD08_RS05635 IPR003593 AAA+ ATPase domain RD08_RS05635 IPR017871 ABC transporter, conserved site RD08_RS05635 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05635 IPR030660 RD08_RS05635 RD08_RS05640 IPR011701 Major facilitator superfamily RD08_RS05640 IPR020846 Major facilitator superfamily domain RD08_RS05645 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS05645 IPR009057 Homeodomain-like RD08_RS05645 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS05645 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS05655 IPR003991 Pertactin virulence factor family RD08_RS05655 IPR003992 Pertactin RD08_RS05655 IPR004899 Pertactin, central region RD08_RS05655 IPR005546 Autotransporter beta-domain RD08_RS05655 IPR006315 Outer membrane autotransporter barrel RD08_RS05655 IPR011050 Pectin lyase fold/virulence factor RD08_RS05655 IPR012332 P22 tailspike C-terminal domain-like RD08_RS05665 IPR002187 Nitrogen regulatory protein PII RD08_RS05665 IPR002332 Nitrogen regulatory protein P-II, urydylation site RD08_RS05665 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD08_RS05665 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD08_RS05670 IPR007475 Membrane fusogenic activity RD08_RS05680 IPR001584 Integrase, catalytic core RD08_RS05680 IPR009057 Homeodomain-like RD08_RS05680 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05680 IPR012337 Ribonuclease H-like domain RD08_RS05680 IPR024967 DNA-binding domain, IS481-type RD08_RS05685 IPR005828 General substrate transporter RD08_RS05685 IPR005829 Sugar transporter, conserved site RD08_RS05685 IPR020846 Major facilitator superfamily domain RD08_RS05695 IPR000883 Cytochrome c oxidase subunit I RD08_RS05695 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RD08_RS05695 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD08_RS05695 IPR023616 Cytochrome c oxidase, subunit I domain RD08_RS05700 IPR000298 Cytochrome c oxidase subunit III domain RD08_RS05700 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD08_RS05700 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RD08_RS05700 IPR024791 Cytochrome c oxidase subunit III RD08_RS05705 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RD08_RS05705 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RD08_RS05710 IPR002994 Surfeit locus 1/Shy1 RD08_RS05715 IPR002347 Glucose/ribitol dehydrogenase RD08_RS05715 IPR016040 NAD(P)-binding domain RD08_RS05720 IPR002508 Cell wall hydrolase/autolysin, catalytic RD08_RS05720 IPR007709 N-formylglutamate amidohydrolase RD08_RS05720 IPR010247 N-formylglutamate deformylase RD08_RS05725 IPR001584 Integrase, catalytic core RD08_RS05725 IPR009057 Homeodomain-like RD08_RS05725 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05725 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05725 IPR012337 Ribonuclease H-like domain RD08_RS05725 IPR024967 DNA-binding domain, IS481-type RD08_RS05730 IPR001584 Integrase, catalytic core RD08_RS05730 IPR009057 Homeodomain-like RD08_RS05730 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05730 IPR012337 Ribonuclease H-like domain RD08_RS05730 IPR024967 DNA-binding domain, IS481-type RD08_RS05735 IPR000551 MerR-type HTH domain RD08_RS05735 IPR009061 DNA binding domain, putative RD08_RS05735 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator RD08_RS05740 IPR001757 Cation-transporting P-type ATPase RD08_RS05740 IPR006121 Heavy metal-associated domain, HMA RD08_RS05740 IPR008250 P-type ATPase, A domain RD08_RS05740 IPR018303 P-type ATPase, phosphorylation site RD08_RS05740 IPR023214 HAD-like domain RD08_RS05740 IPR023299 P-type ATPase, cytoplasmic domain N RD08_RS05740 IPR027256 Cation-transporting P-type ATPase, subfamily IB RD08_RS05745 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS05745 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS05750 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS05750 IPR009057 Homeodomain-like RD08_RS05750 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS05750 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS05755 IPR025421 Protein of unknown function DUF4148 RD08_RS05760 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RD08_RS05760 IPR006638 Elongator protein 3/MiaB/NifB RD08_RS05760 IPR007197 Radical SAM RD08_RS05760 IPR010722 Biotin and thiamin synthesis-associated domain RD08_RS05760 IPR013785 Aldolase-type TIM barrel RD08_RS05760 IPR024177 Biotin synthase RD08_RS05770 IPR011701 Major facilitator superfamily RD08_RS05770 IPR020846 Major facilitator superfamily domain RD08_RS05775 IPR012336 Thioredoxin-like fold RD08_RS05775 IPR013740 Redoxin RD08_RS05785 IPR002925 Dienelactone hydrolase RD08_RS05785 IPR029058 Alpha/Beta hydrolase fold RD08_RS05790 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD08_RS05790 IPR008023 Protein of unknown function DUF748 RD08_RS05795 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RD08_RS05795 IPR023045 Molybdenum cofactor biosynthesis C RD08_RS05795 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type RD08_RS05800 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RD08_RS05800 IPR012675 Beta-grasp domain RD08_RS05800 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD08_RS05805 IPR003448 Molybdopterin biosynthesis MoaE RD08_RS05810 IPR001453 Molybdopterin binding domain RD08_RS05810 IPR012245 Molybdenum cofactor biosynthesis protein MoaB RD08_RS05810 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria RD08_RS05815 IPR001453 Molybdopterin binding domain RD08_RS05815 IPR005110 MoeA, N-terminal and linker domain RD08_RS05815 IPR005111 MoeA, C-terminal, domain IV RD08_RS05815 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD08_RS05820 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site RD08_RS05820 IPR006638 Elongator protein 3/MiaB/NifB RD08_RS05820 IPR007197 Radical SAM RD08_RS05820 IPR010505 Molybdenum cofactor synthesis C-terminal RD08_RS05820 IPR013483 Molybdenum cofactor biosynthesis protein A RD08_RS05820 IPR013785 Aldolase-type TIM barrel RD08_RS05825 IPR000847 Transcription regulator HTH, LysR RD08_RS05825 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05825 IPR024370 PBP domain RD08_RS05830 IPR001584 Integrase, catalytic core RD08_RS05830 IPR009057 Homeodomain-like RD08_RS05830 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05830 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05830 IPR012337 Ribonuclease H-like domain RD08_RS05830 IPR024967 DNA-binding domain, IS481-type RD08_RS05835 IPR000415 Nitroreductase-like RD08_RS05835 IPR026021 Putative NAD(P)H nitroreductase YdjA-like RD08_RS05835 IPR029479 Nitroreductase RD08_RS05840 IPR000362 Fumarate lyase family RD08_RS05840 IPR008948 L-Aspartase-like RD08_RS05840 IPR009049 Argininosuccinate lyase RD08_RS05840 IPR020557 Fumarate lyase, conserved site RD08_RS05840 IPR022761 Fumarate lyase, N-terminal RD08_RS05840 IPR024083 Fumarase/histidase, N-terminal RD08_RS05840 IPR029419 Argininosuccinate lyase, C-terminal RD08_RS05845 IPR006685 Mechanosensitive ion channel MscS RD08_RS05845 IPR010920 Like-Sm (LSM) domain RD08_RS05845 IPR030192 RD08_RS05845 RD08_RS05850 IPR003010 Carbon-nitrogen hydrolase RD08_RS05850 IPR003694 NAD(+) synthetase RD08_RS05850 IPR014445 Glutamine-dependent NAD(+) synthetase RD08_RS05850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS05850 IPR022310 NAD/GMP synthase RD08_RS05855 IPR002187 Nitrogen regulatory protein PII RD08_RS05855 IPR002332 Nitrogen regulatory protein P-II, urydylation site RD08_RS05855 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD08_RS05855 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD08_RS05855 IPR017918 Nitrogen regulatory protein PII, conserved site RD08_RS05860 IPR004260 Pyrimidine dimer DNA glycosylase RD08_RS05860 IPR021143 Pyrimidine dimer DNA glycosylase, endonuclease V type RD08_RS05860 IPR024796 T4 endonuclease V RD08_RS05880 IPR000847 Transcription regulator HTH, LysR RD08_RS05880 IPR005119 LysR, substrate-binding RD08_RS05880 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS05885 IPR000101 Gamma-glutamyltranspeptidase RD08_RS05885 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS05890 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS05890 IPR030678 RD08_RS05890 RD08_RS05895 IPR000515 MetI-like domain RD08_RS05900 IPR000515 MetI-like domain RD08_RS05900 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD08_RS05905 IPR004881 Ribosome biogenesis GTPase RsgA, putative RD08_RS05905 IPR010914 EngC GTPase RD08_RS05905 IPR012340 Nucleic acid-binding, OB-fold RD08_RS05905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS05910 IPR001915 Peptidase M48 RD08_RS05910 IPR027057 CAAX prenyl protease 1 RD08_RS05910 IPR032456 RD08_RS05910 RD08_RS05915 IPR012337 Ribonuclease H-like domain RD08_RS05915 IPR013520 Exonuclease, RNase T/DNA polymerase III RD08_RS05915 IPR022894 Oligoribonuclease RD08_RS05920 IPR004443 YjeF N-terminal domain RD08_RS05925 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX RD08_RS05925 IPR012906 PaaX-like, N-terminal RD08_RS05925 IPR013225 PaaX-like, C-terminal RD08_RS05930 IPR007814 Phenylacetic acid catabolic RD08_RS05930 IPR009078 Ferritin-like superfamily RD08_RS05930 IPR011881 Phenylacetate-CoA oxygenase, PaaG subunit RD08_RS05930 IPR012347 Ferritin-related RD08_RS05935 IPR009359 Phenylacetic acid degradation B RD08_RS05940 IPR007814 Phenylacetic acid catabolic RD08_RS05940 IPR009078 Ferritin-like superfamily RD08_RS05940 IPR011882 Phenylacetate-CoA oxygenase, PaaI subunit RD08_RS05940 IPR012347 Ferritin-related RD08_RS05945 IPR002744 Domain of unknown function DUF59 RD08_RS05945 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit RD08_RS05950 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS05950 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS05950 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD08_RS05950 IPR001834 NADH:cytochrome b5 reductase (CBR) RD08_RS05950 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS05950 IPR008333 Oxidoreductase, FAD-binding domain RD08_RS05950 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit RD08_RS05950 IPR012675 Beta-grasp domain RD08_RS05950 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS05955 IPR001584 Integrase, catalytic core RD08_RS05955 IPR009057 Homeodomain-like RD08_RS05955 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05955 IPR012337 Ribonuclease H-like domain RD08_RS05955 IPR024967 DNA-binding domain, IS481-type RD08_RS05960 IPR011975 Phenylacetic acid degradation protein PaaN2 RD08_RS05960 IPR015590 Aldehyde dehydrogenase domain RD08_RS05960 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS05960 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS05960 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS05965 IPR001753 Crotonase superfamily RD08_RS05965 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RD08_RS05965 IPR014748 Crontonase, C-terminal RD08_RS05965 IPR029045 ClpP/crotonase-like domain RD08_RS05970 IPR003736 Phenylacetic acid degradation-related domain RD08_RS05970 IPR006683 Thioesterase superfamily RD08_RS05970 IPR011973 Phenylacetic acid degradation protein PaaD RD08_RS05970 IPR029069 HotDog domain RD08_RS05975 IPR000873 AMP-dependent synthetase/ligase RD08_RS05975 IPR011880 Phenylacetate-CoA ligase RD08_RS05975 IPR028154 AMP-dependent ligase, C-terminal RD08_RS05980 IPR000259 Fimbrial-type adhesion domain RD08_RS05980 IPR008966 Adhesion domain RD08_RS05985 IPR001584 Integrase, catalytic core RD08_RS05985 IPR009057 Homeodomain-like RD08_RS05985 IPR012337 Ribonuclease H-like domain RD08_RS05985 IPR024967 DNA-binding domain, IS481-type RD08_RS05990 IPR001584 Integrase, catalytic core RD08_RS05990 IPR009057 Homeodomain-like RD08_RS05990 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS05990 IPR012337 Ribonuclease H-like domain RD08_RS05990 IPR024967 DNA-binding domain, IS481-type RD08_RS05995 IPR004682 TRAP dicarboxylate transporter RD08_RS05995 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS06000 IPR004681 TRAP transporter permease protein RD08_RS06000 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS06005 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS06010 IPR010073 Phosphoribosylformylglycinamidine synthase RD08_RS06010 IPR010918 AIR synthase-related protein, C-terminal domain RD08_RS06010 IPR016188 PurM, N-terminal-like RD08_RS06010 IPR029062 Class I glutamine amidotransferase-like RD08_RS06015 IPR008638 Filamentous haemagglutinin, N-terminal RD08_RS06015 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RD08_RS06015 IPR011050 Pectin lyase fold/virulence factor RD08_RS06015 IPR012334 Pectin lyase fold RD08_RS06015 IPR025157 Haemagluttinin repeat RD08_RS06020 IPR001584 Integrase, catalytic core RD08_RS06020 IPR009057 Homeodomain-like RD08_RS06020 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06020 IPR012337 Ribonuclease H-like domain RD08_RS06020 IPR024967 DNA-binding domain, IS481-type RD08_RS06025 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein RD08_RS06030 IPR000835 MarR-type HTH domain RD08_RS06030 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06030 IPR023187 Transcriptional regulator MarR-type, conserved site RD08_RS06035 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS06035 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06035 IPR011051 RmlC-like cupin domain RD08_RS06035 IPR013096 Cupin 2, conserved barrel RD08_RS06035 IPR014710 RmlC-like jelly roll fold RD08_RS06040 IPR001303 Class II aldolase/adducin N-terminal RD08_RS06045 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS06045 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD08_RS06050 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RD08_RS06055 IPR024924 7-carboxy-7-deazaguanine synthase-like RD08_RS06055 IPR030977 RD08_RS06055 RD08_RS06060 IPR000352 Peptide chain release factor class I/class II RD08_RS06065 IPR014509 Uncharacterised conserved protein UCP020606 RD08_RS06070 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RD08_RS06070 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RD08_RS06075 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06075 IPR014757 Transcription regulator IclR, C-terminal RD08_RS06075 IPR029016 GAF domain-like RD08_RS06080 IPR002220 DapA-like RD08_RS06080 IPR013785 Aldolase-type TIM barrel RD08_RS06085 IPR005064 Bordetella uptake gene RD08_RS06090 IPR013784 Carbohydrate-binding-like fold RD08_RS06090 IPR014766 Carboxypeptidase, regulatory domain RD08_RS06095 IPR008551 Protein of unknown function DUF833 RD08_RS06100 IPR002818 ThiJ/PfpI RD08_RS06100 IPR029062 Class I glutamine amidotransferase-like RD08_RS06105 IPR006680 Amidohydrolase 1 RD08_RS06105 IPR032466 RD08_RS06105 RD08_RS06110 IPR003953 FAD binding domain RD08_RS06110 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS06110 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD08_RS06115 IPR005064 Bordetella uptake gene RD08_RS06120 IPR002347 Glucose/ribitol dehydrogenase RD08_RS06120 IPR016040 NAD(P)-binding domain RD08_RS06125 IPR005471 Transcription regulator IclR, N-terminal RD08_RS06125 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06125 IPR014757 Transcription regulator IclR, C-terminal RD08_RS06125 IPR029016 GAF domain-like RD08_RS06130 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RD08_RS06130 IPR006076 FAD dependent oxidoreductase RD08_RS06130 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS06130 IPR031656 RD08_RS06130 RD08_RS06135 IPR001034 HTH DeoR N-terminal domain RD08_RS06135 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06135 IPR014036 DeoR C-terminal sensor domain RD08_RS06135 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RD08_RS06140 IPR003439 ABC transporter-like RD08_RS06140 IPR003593 AAA+ ATPase domain RD08_RS06140 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS06140 IPR012340 Nucleic acid-binding, OB-fold RD08_RS06140 IPR013611 Transport-associated OB, type 2 RD08_RS06140 IPR017871 ABC transporter, conserved site RD08_RS06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06145 IPR003439 ABC transporter-like RD08_RS06145 IPR003593 AAA+ ATPase domain RD08_RS06145 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS06145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06150 IPR000515 MetI-like domain RD08_RS06155 IPR000515 MetI-like domain RD08_RS06160 IPR018678 Protein of unknown function DUF2160, transmembrane RD08_RS06165 IPR014597 ABC transporter, periplasmic substrate-binding protein RD08_RS06170 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria RD08_RS06175 IPR007462 Protein of unknown function DUF502 RD08_RS06180 IPR000485 AsnC-type HTH domain RD08_RS06180 IPR011008 Dimeric alpha-beta barrel RD08_RS06180 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06180 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS06180 IPR019888 Transcription regulator AsnC-type RD08_RS06185 IPR006076 FAD dependent oxidoreductase RD08_RS06185 IPR023080 D-amino acid dehydrogenase small subunit, DadA RD08_RS06185 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS06190 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD08_RS06190 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type RD08_RS06190 IPR029052 Metallo-dependent phosphatase-like RD08_RS06195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06200 IPR005064 Bordetella uptake gene RD08_RS06205 IPR001584 Integrase, catalytic core RD08_RS06205 IPR009057 Homeodomain-like RD08_RS06205 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06205 IPR012337 Ribonuclease H-like domain RD08_RS06205 IPR024967 DNA-binding domain, IS481-type RD08_RS06215 IPR000014 PAS domain RD08_RS06215 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS06215 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06215 IPR013656 PAS fold-4 RD08_RS06215 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS06225 IPR005546 Autotransporter beta-domain RD08_RS06230 IPR018715 Protein of unknown function DUF2239 RD08_RS06235 IPR000644 CBS domain RD08_RS06235 IPR001093 IMP dehydrogenase/GMP reductase RD08_RS06235 IPR005990 Inosine-5'-monophosphate dehydrogenase RD08_RS06235 IPR013785 Aldolase-type TIM barrel RD08_RS06235 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RD08_RS06240 IPR001674 GMP synthase, C-terminal RD08_RS06240 IPR004739 GMP synthase, N-terminal RD08_RS06240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS06240 IPR017926 Glutamine amidotransferase RD08_RS06240 IPR022310 NAD/GMP synthase RD08_RS06240 IPR022955 GMP synthase RD08_RS06240 IPR029062 Class I glutamine amidotransferase-like RD08_RS06245 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS06245 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06250 IPR012893 HipA-like, C-terminal RD08_RS06250 IPR012894 HipA, N-terminal subdomain 2 RD08_RS06250 IPR017508 HipA, N-terminal subdomain 1 RD08_RS06255 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS06255 IPR009057 Homeodomain-like RD08_RS06255 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS06255 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS06260 IPR011701 Major facilitator superfamily RD08_RS06260 IPR020846 Major facilitator superfamily domain RD08_RS06270 IPR005471 Transcription regulator IclR, N-terminal RD08_RS06270 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06270 IPR014757 Transcription regulator IclR, C-terminal RD08_RS06270 IPR029016 GAF domain-like RD08_RS06275 IPR011059 Metal-dependent hydrolase, composite domain RD08_RS06275 IPR013108 Amidohydrolase 3 RD08_RS06275 IPR032466 RD08_RS06275 RD08_RS06280 IPR015168 SsuA/THI5-like RD08_RS06285 IPR003439 ABC transporter-like RD08_RS06285 IPR003593 AAA+ ATPase domain RD08_RS06285 IPR017871 ABC transporter, conserved site RD08_RS06285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06290 IPR000515 MetI-like domain RD08_RS06295 IPR007506 Domain of unknown function DUF521 RD08_RS06300 IPR002840 Domain of unknown function DUF126 RD08_RS06300 IPR008279 PEP-utilising enzyme, mobile domain RD08_RS06300 IPR012016 Uncharacterised protein family UPF0107 RD08_RS06300 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS06305 IPR029062 Class I glutamine amidotransferase-like RD08_RS06310 IPR001584 Integrase, catalytic core RD08_RS06310 IPR009057 Homeodomain-like RD08_RS06310 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06310 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06310 IPR012337 Ribonuclease H-like domain RD08_RS06310 IPR024967 DNA-binding domain, IS481-type RD08_RS06315 IPR002818 ThiJ/PfpI RD08_RS06315 IPR029062 Class I glutamine amidotransferase-like RD08_RS06320 IPR001902 Sulphate anion transporter RD08_RS06320 IPR002645 STAS domain RD08_RS06320 IPR011547 Sulphate transporter RD08_RS06325 IPR001279 Beta-lactamase-like RD08_RS06325 IPR011108 RNA-metabolising metallo-beta-lactamase RD08_RS06325 IPR022712 Beta-Casp domain RD08_RS06330 IPR001584 Integrase, catalytic core RD08_RS06330 IPR009057 Homeodomain-like RD08_RS06330 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06330 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06330 IPR012337 Ribonuclease H-like domain RD08_RS06330 IPR024967 DNA-binding domain, IS481-type RD08_RS06340 IPR001279 Beta-lactamase-like RD08_RS06345 IPR002818 ThiJ/PfpI RD08_RS06345 IPR009057 Homeodomain-like RD08_RS06345 IPR018060 DNA binding HTH domain, AraC-type RD08_RS06345 IPR018062 HTH domain AraC-type, conserved site RD08_RS06345 IPR029062 Class I glutamine amidotransferase-like RD08_RS06350 IPR000847 Transcription regulator HTH, LysR RD08_RS06350 IPR005119 LysR, substrate-binding RD08_RS06350 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06355 IPR011051 RmlC-like cupin domain RD08_RS06355 IPR014710 RmlC-like jelly roll fold RD08_RS06355 IPR025979 ChrR-like cupin domain RD08_RS06360 IPR001613 Flavin amine oxidase RD08_RS06360 IPR002937 Amine oxidase RD08_RS06360 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS06365 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS06365 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD08_RS06365 IPR011032 GroES (chaperonin 10)-like RD08_RS06365 IPR013149 Alcohol dehydrogenase, C-terminal RD08_RS06365 IPR013154 Alcohol dehydrogenase GroES-like RD08_RS06365 IPR016040 NAD(P)-binding domain RD08_RS06365 IPR020843 Polyketide synthase, enoylreductase RD08_RS06370 IPR011701 Major facilitator superfamily RD08_RS06370 IPR020846 Major facilitator superfamily domain RD08_RS06375 IPR000524 Transcription regulator HTH, GntR RD08_RS06375 IPR004839 Aminotransferase, class I/classII RD08_RS06375 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06375 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS06375 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS06375 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS06380 IPR007396 Transcriptional regulator PAI 2-type RD08_RS06380 IPR012349 FMN-binding split barrel RD08_RS06385 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD08_RS06390 IPR014922 Domain of unknown function DUF1801 RD08_RS06395 IPR002933 Peptidase M20 RD08_RS06395 IPR011650 Peptidase M20, dimerisation domain RD08_RS06400 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS06400 IPR030678 RD08_RS06400 RD08_RS06405 IPR000515 MetI-like domain RD08_RS06410 IPR000515 MetI-like domain RD08_RS06415 IPR003439 ABC transporter-like RD08_RS06415 IPR003593 AAA+ ATPase domain RD08_RS06415 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS06415 IPR017871 ABC transporter, conserved site RD08_RS06415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06420 IPR000843 Transcription regulator HTH, LacI RD08_RS06420 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06420 IPR028082 Periplasmic binding protein-like I RD08_RS06430 IPR009061 DNA binding domain, putative RD08_RS06430 IPR015358 Transcription regulator MerR, DNA binding RD08_RS06435 IPR001584 Integrase, catalytic core RD08_RS06435 IPR009057 Homeodomain-like RD08_RS06435 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06435 IPR012337 Ribonuclease H-like domain RD08_RS06435 IPR024967 DNA-binding domain, IS481-type RD08_RS06440 IPR007404 Protein of unknown function DUF457 RD08_RS06445 IPR032816 RD08_RS06445 RD08_RS06445 IPR032818 RD08_RS06445 RD08_RS06450 IPR000182 GNAT domain RD08_RS06450 IPR016181 Acyl-CoA N-acyltransferase RD08_RS06450 IPR032962 RD08_RS06450 RD08_RS06455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS06460 IPR001584 Integrase, catalytic core RD08_RS06460 IPR009057 Homeodomain-like RD08_RS06460 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06460 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06460 IPR012337 Ribonuclease H-like domain RD08_RS06460 IPR024967 DNA-binding domain, IS481-type RD08_RS06470 IPR000524 Transcription regulator HTH, GntR RD08_RS06470 IPR004839 Aminotransferase, class I/classII RD08_RS06470 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06470 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS06470 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS06470 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS06475 IPR001584 Integrase, catalytic core RD08_RS06475 IPR009057 Homeodomain-like RD08_RS06475 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06475 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06475 IPR012337 Ribonuclease H-like domain RD08_RS06475 IPR024967 DNA-binding domain, IS481-type RD08_RS06480 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RD08_RS06480 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RD08_RS06480 IPR029054 dUTPase-like RD08_RS06485 IPR001584 Integrase, catalytic core RD08_RS06485 IPR009057 Homeodomain-like RD08_RS06485 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06485 IPR012337 Ribonuclease H-like domain RD08_RS06485 IPR024967 DNA-binding domain, IS481-type RD08_RS06490 IPR001706 Ribosomal protein L35, non-mitochondrial RD08_RS06490 IPR018265 Ribosomal protein L35, conserved site RD08_RS06490 IPR021137 Ribosomal protein L35 RD08_RS06495 IPR005813 Ribosomal protein L20 RD08_RS06500 IPR002319 Phenylalanyl-tRNA synthetase RD08_RS06500 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RD08_RS06500 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RD08_RS06500 IPR010978 tRNA-binding arm RD08_RS06500 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RD08_RS06505 IPR002547 tRNA-binding domain RD08_RS06505 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RD08_RS06505 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding RD08_RS06505 IPR005146 B3/B4 tRNA-binding domain RD08_RS06505 IPR005147 tRNA synthetase, B5-domain RD08_RS06505 IPR009061 DNA binding domain, putative RD08_RS06505 IPR012340 Nucleic acid-binding, OB-fold RD08_RS06505 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RD08_RS06510 IPR000119 Histone-like bacterial DNA-binding protein RD08_RS06510 IPR005684 Integration host factor, alpha subunit RD08_RS06510 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD08_RS06510 IPR020816 Histone-like DNA-binding protein, conserved site RD08_RS06515 IPR000551 MerR-type HTH domain RD08_RS06515 IPR009061 DNA binding domain, putative RD08_RS06530 IPR007461 Ysc84 actin-binding domain RD08_RS06540 IPR001584 Integrase, catalytic core RD08_RS06540 IPR009057 Homeodomain-like RD08_RS06540 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06540 IPR012337 Ribonuclease H-like domain RD08_RS06540 IPR024967 DNA-binding domain, IS481-type RD08_RS06560 IPR007346 Endonuclease I RD08_RS06565 IPR012556 Entericidin EcnAB RD08_RS06580 IPR002082 Aspartate carbamoyltransferase RD08_RS06580 IPR006130 Aspartate/ornithine carbamoyltransferase RD08_RS06580 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD08_RS06580 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD08_RS06585 IPR007476 Putative exonuclease, RdgC RD08_RS06595 IPR003673 CoA-transferase family III RD08_RS06595 IPR023606 CoA-transferase family III domain RD08_RS06600 IPR000847 Transcription regulator HTH, LysR RD08_RS06600 IPR005119 LysR, substrate-binding RD08_RS06600 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06605 IPR016039 Thiolase-like RD08_RS06610 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD08_RS06610 IPR012340 Nucleic acid-binding, OB-fold RD08_RS06610 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD08_RS06615 IPR002539 MaoC-like domain RD08_RS06615 IPR029069 HotDog domain RD08_RS06620 IPR002347 Glucose/ribitol dehydrogenase RD08_RS06620 IPR016040 NAD(P)-binding domain RD08_RS06620 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS06630 IPR000515 MetI-like domain RD08_RS06635 IPR003439 ABC transporter-like RD08_RS06635 IPR003593 AAA+ ATPase domain RD08_RS06635 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS06635 IPR012340 Nucleic acid-binding, OB-fold RD08_RS06635 IPR013611 Transport-associated OB, type 2 RD08_RS06635 IPR017871 ABC transporter, conserved site RD08_RS06635 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06640 IPR001753 Crotonase superfamily RD08_RS06640 IPR014748 Crontonase, C-terminal RD08_RS06640 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS06640 IPR029045 ClpP/crotonase-like domain RD08_RS06645 IPR005828 General substrate transporter RD08_RS06645 IPR005829 Sugar transporter, conserved site RD08_RS06645 IPR020846 Major facilitator superfamily domain RD08_RS06650 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS06650 IPR003660 HAMP linker domain RD08_RS06650 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS06650 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS06650 IPR013727 Two-component sensor kinase N-terminal RD08_RS06655 IPR001789 Signal transduction response regulator, receiver domain RD08_RS06655 IPR001867 Signal transduction response regulator, C-terminal RD08_RS06655 IPR011006 CheY-like superfamily RD08_RS06655 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06655 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS06660 IPR003593 AAA+ ATPase domain RD08_RS06660 IPR013765 DNA recombination and repair protein RecA RD08_RS06660 IPR020584 DNA recombination/repair protein RecA, conserved site RD08_RS06660 IPR023400 DNA recombination and repair protein RecA, C-terminal RD08_RS06660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06665 IPR003783 Regulatory protein RecX RD08_RS06665 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06670 IPR000847 Transcription regulator HTH, LysR RD08_RS06670 IPR005119 LysR, substrate-binding RD08_RS06670 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06675 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RD08_RS06675 IPR006276 Cobalamin-independent methionine synthase RD08_RS06675 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal RD08_RS06680 IPR021312 Protein of unknown function DUF2889 RD08_RS06685 IPR005809 Succinyl-CoA synthetase, beta subunit RD08_RS06685 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RD08_RS06685 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RD08_RS06685 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS06685 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS06685 IPR016102 Succinyl-CoA synthetase-like RD08_RS06685 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RD08_RS06690 IPR003781 CoA-binding RD08_RS06690 IPR005810 Succinyl-CoA ligase, alpha subunit RD08_RS06690 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RD08_RS06690 IPR016040 NAD(P)-binding domain RD08_RS06690 IPR016102 Succinyl-CoA synthetase-like RD08_RS06690 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RD08_RS06695 IPR005496 Integral membrane protein TerC RD08_RS06695 IPR022301 Integral membrane protein YjbE RD08_RS06700 IPR005496 Integral membrane protein TerC RD08_RS06700 IPR022301 Integral membrane protein YjbE RD08_RS06705 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase RD08_RS06705 IPR022417 Porphobilinogen deaminase, N-terminal RD08_RS06705 IPR022418 Porphobilinogen deaminase, C-terminal RD08_RS06705 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RD08_RS06710 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase RD08_RS06715 IPR007470 HemX RD08_RS06720 IPR005254 Heme biosynthesis-associated TPR protein RD08_RS06720 IPR010817 HemY, N-terminal RD08_RS06720 IPR011990 Tetratricopeptide-like helical domain RD08_RS06725 IPR008162 Inorganic pyrophosphatase RD08_RS06730 IPR011234 Fumarylacetoacetase, C-terminal-related RD08_RS06735 IPR012556 Entericidin EcnAB RD08_RS06760 IPR013974 SAF domain RD08_RS06760 IPR017592 Pilus assembly, Flp-type CpaB RD08_RS06760 IPR031571 RD08_RS06760 RD08_RS06765 IPR001775 GspD/PilQ family RD08_RS06765 IPR004845 Type II secretion system GspD, conserved site RD08_RS06765 IPR004846 Type II/III secretion system RD08_RS06765 IPR032789 RD08_RS06765 RD08_RS06770 IPR000253 Forkhead-associated (FHA) domain RD08_RS06770 IPR001482 Type II secretion system protein E RD08_RS06770 IPR003593 AAA+ ATPase domain RD08_RS06770 IPR008984 SMAD/FHA domain RD08_RS06770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06775 IPR018076 Type II secretion system F domain RD08_RS06785 IPR001584 Integrase, catalytic core RD08_RS06785 IPR009057 Homeodomain-like RD08_RS06785 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06785 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06785 IPR012337 Ribonuclease H-like domain RD08_RS06785 IPR024967 DNA-binding domain, IS481-type RD08_RS06790 IPR005064 Bordetella uptake gene RD08_RS06795 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RD08_RS06795 IPR016040 NAD(P)-binding domain RD08_RS06795 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD08_RS06795 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD08_RS06795 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RD08_RS06800 IPR003767 Malate/L-lactate dehydrogenase RD08_RS06805 IPR000847 Transcription regulator HTH, LysR RD08_RS06805 IPR005119 LysR, substrate-binding RD08_RS06805 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06810 IPR008257 Renal dipeptidase family RD08_RS06810 IPR032466 RD08_RS06810 RD08_RS06815 IPR001584 Integrase, catalytic core RD08_RS06815 IPR009057 Homeodomain-like RD08_RS06815 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06815 IPR012337 Ribonuclease H-like domain RD08_RS06815 IPR024967 DNA-binding domain, IS481-type RD08_RS06820 IPR006076 FAD dependent oxidoreductase RD08_RS06820 IPR006278 Sarcosine oxidase, beta subunit, heterotetrameric RD08_RS06820 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS06825 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric RD08_RS06830 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD08_RS06830 IPR006222 Glycine cleavage T-protein, N-terminal RD08_RS06830 IPR006277 Sarcosine oxidase, alpha subunit RD08_RS06830 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RD08_RS06830 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS06830 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD08_RS06830 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RD08_RS06835 IPR007375 Sarcosine oxidase, gamma subunit RD08_RS06840 IPR002376 Formyl transferase, N-terminal RD08_RS06840 IPR004810 Formyltetrahydrofolate deformylase RD08_RS06845 IPR005064 Bordetella uptake gene RD08_RS06850 IPR005656 MmgE/PrpD RD08_RS06855 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS06855 IPR029058 Alpha/Beta hydrolase fold RD08_RS06865 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RD08_RS06865 IPR006094 FAD linked oxidase, N-terminal RD08_RS06865 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RD08_RS06865 IPR016166 FAD-binding, type 2 RD08_RS06865 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS06865 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS06870 IPR000846 Dihydrodipicolinate reductase, N-terminal RD08_RS06870 IPR016040 NAD(P)-binding domain RD08_RS06870 IPR022663 Dihydrodipicolinate reductase, C-terminal RD08_RS06870 IPR022664 Dihydrodipicolinate reductase, conserved site RD08_RS06870 IPR023940 Dihydrodipicolinate reductase, bacterial RD08_RS06875 IPR007450 Lipoprotein SmpA/OmlA RD08_RS06875 IPR026592 Outer membrane protein assembly factor BamE RD08_RS06880 IPR002481 Ferric-uptake regulator RD08_RS06880 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06885 IPR003395 RecF/RecN/SMC, N-terminal RD08_RS06885 IPR004604 DNA recombination/repair protein RecN RD08_RS06885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06890 IPR002504 Inorganic polyphosphate/ATP-NAD kinase RD08_RS06890 IPR016064 ATP-NAD kinase-like domain RD08_RS06890 IPR017437 ATP-NAD kinase, PpnK-type, all-beta RD08_RS06890 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 RD08_RS06895 IPR002571 Heat-inducible transcription repressor HrcA RD08_RS06895 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain RD08_RS06895 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06895 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal RD08_RS06895 IPR029016 GAF domain-like RD08_RS06900 IPR001015 Ferrochelatase RD08_RS06900 IPR019772 Ferrochelatase, active site RD08_RS06910 IPR000740 GrpE nucleotide exchange factor RD08_RS06910 IPR009012 GrpE nucleotide exchange factor, head RD08_RS06910 IPR013805 GrpE nucleotide exchange factor, coiled-coil RD08_RS06915 IPR012336 Thioredoxin-like fold RD08_RS06920 IPR012725 Chaperone DnaK RD08_RS06920 IPR013126 Heat shock protein 70 family RD08_RS06920 IPR018181 Heat shock protein 70, conserved site RD08_RS06920 IPR029047 Heat shock protein 70kD, peptide-binding domain RD08_RS06920 IPR029048 Heat shock protein 70kD, C-terminal domain RD08_RS06925 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RD08_RS06925 IPR001623 DnaJ domain RD08_RS06925 IPR002939 Chaperone DnaJ, C-terminal RD08_RS06925 IPR008971 HSP40/DnaJ peptide-binding RD08_RS06925 IPR012724 Chaperone DnaJ RD08_RS06925 IPR018253 DnaJ domain, conserved site RD08_RS06930 IPR001431 Peptidase M16, zinc-binding site RD08_RS06930 IPR007863 Peptidase M16, C-terminal domain RD08_RS06930 IPR011237 Peptidase M16 domain RD08_RS06930 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RD08_RS06930 IPR011765 Peptidase M16, N-terminal RD08_RS06940 IPR016181 Acyl-CoA N-acyltransferase RD08_RS06945 IPR008912 Uncharacterised protein family CoxE-like RD08_RS06950 IPR003593 AAA+ ATPase domain RD08_RS06950 IPR003959 ATPase, AAA-type, core RD08_RS06950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS06955 IPR001584 Integrase, catalytic core RD08_RS06955 IPR009057 Homeodomain-like RD08_RS06955 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06955 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS06955 IPR012337 Ribonuclease H-like domain RD08_RS06955 IPR024967 DNA-binding domain, IS481-type RD08_RS06960 IPR009056 Cytochrome c-like domain RD08_RS06965 IPR008168 Cytochrome c, class IC RD08_RS06965 IPR009056 Cytochrome c-like domain RD08_RS06970 IPR014993 Protein of unknown function DUF1841 RD08_RS06975 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD08_RS06975 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic RD08_RS06975 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD08_RS06975 IPR024084 Isopropylmalate dehydrogenase-like domain RD08_RS06980 IPR002201 Glycosyl transferase, family 9 RD08_RS06985 IPR007016 O-antigen ligase-related RD08_RS06990 IPR001584 Integrase, catalytic core RD08_RS06990 IPR009057 Homeodomain-like RD08_RS06990 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS06990 IPR012337 Ribonuclease H-like domain RD08_RS06990 IPR024967 DNA-binding domain, IS481-type RD08_RS06995 IPR001789 Signal transduction response regulator, receiver domain RD08_RS06995 IPR001867 Signal transduction response regulator, C-terminal RD08_RS06995 IPR011006 CheY-like superfamily RD08_RS06995 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07000 IPR003018 GAF domain RD08_RS07000 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS07000 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS07000 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal RD08_RS07000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS07000 IPR025201 Sensor protein KdpD, transmembrane domain RD08_RS07000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07000 IPR029016 GAF domain-like RD08_RS07005 IPR003820 Potassium-transporting ATPase C chain RD08_RS07010 IPR001757 Cation-transporting P-type ATPase RD08_RS07010 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA RD08_RS07010 IPR008250 P-type ATPase, A domain RD08_RS07010 IPR018303 P-type ATPase, phosphorylation site RD08_RS07010 IPR023214 HAD-like domain RD08_RS07010 IPR023299 P-type ATPase, cytoplasmic domain N RD08_RS07015 IPR004623 Potassium-transporting ATPase A chain RD08_RS07020 IPR019886 Sodium symporter small subunit, predicted RD08_RS07025 IPR001734 Sodium/solute symporter RD08_RS07025 IPR018247 EF-Hand 1, calcium-binding site RD08_RS07025 IPR019899 Sodium/solute symporter, VC2705 subfamily RD08_RS07030 IPR001584 Integrase, catalytic core RD08_RS07030 IPR009057 Homeodomain-like RD08_RS07030 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07030 IPR012337 Ribonuclease H-like domain RD08_RS07030 IPR024967 DNA-binding domain, IS481-type RD08_RS07035 IPR001584 Integrase, catalytic core RD08_RS07035 IPR009057 Homeodomain-like RD08_RS07035 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07035 IPR012337 Ribonuclease H-like domain RD08_RS07035 IPR024967 DNA-binding domain, IS481-type RD08_RS07040 IPR000390 Small multidrug resistance protein family RD08_RS07045 IPR002625 Smr protein/MutS2 C-terminal RD08_RS07050 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD08_RS07050 IPR005982 Thioredoxin reductase RD08_RS07050 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD08_RS07050 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS07055 IPR002543 FtsK domain RD08_RS07055 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07055 IPR018541 FtsK gamma domain RD08_RS07055 IPR025199 Domain of unknown function DUF4117 RD08_RS07055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07060 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RD08_RS07060 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria RD08_RS07060 IPR029046 Lipoprotein localisation LolA/LolB/LppX RD08_RS07065 IPR003593 AAA+ ATPase domain RD08_RS07065 IPR003959 ATPase, AAA-type, core RD08_RS07065 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD08_RS07065 IPR021886 MgsA AAA+ ATPase C-terminal RD08_RS07065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07065 IPR032423 RD08_RS07065 RD08_RS07070 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD08_RS07070 IPR002317 Serine-tRNA ligase, type1 RD08_RS07070 IPR010978 tRNA-binding arm RD08_RS07070 IPR015866 Serine-tRNA synthetase, type1, N-terminal RD08_RS07095 IPR000160 GGDEF domain RD08_RS07095 IPR029787 Nucleotide cyclase RD08_RS07105 IPR002771 Multiple antibiotic resistance (MarC)-related RD08_RS07110 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS07110 IPR010105 TonB-dependent siderophore receptor RD08_RS07110 IPR012910 TonB-dependent receptor, plug RD08_RS07115 IPR011701 Major facilitator superfamily RD08_RS07115 IPR020846 Major facilitator superfamily domain RD08_RS07120 IPR009057 Homeodomain-like RD08_RS07120 IPR018060 DNA binding HTH domain, AraC-type RD08_RS07125 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD08_RS07125 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS07130 IPR023998 Siderophore ferric iron reductase, AHA1954 family RD08_RS07130 IPR024726 Ferric iron reductase, C-terminal RD08_RS07135 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RD08_RS07135 IPR022770 Ferric iron reductase FhuF domain RD08_RS07140 IPR016181 Acyl-CoA N-acyltransferase RD08_RS07140 IPR019432 Siderophore biosynthesis protein, conserved domain RD08_RS07145 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS07145 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RD08_RS07155 IPR006153 Cation/H+ exchanger RD08_RS07160 IPR002347 Glucose/ribitol dehydrogenase RD08_RS07160 IPR011294 3-hydroxybutyrate dehydrogenase RD08_RS07160 IPR016040 NAD(P)-binding domain RD08_RS07160 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS07165 IPR001584 Integrase, catalytic core RD08_RS07165 IPR009057 Homeodomain-like RD08_RS07165 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07165 IPR012337 Ribonuclease H-like domain RD08_RS07165 IPR024967 DNA-binding domain, IS481-type RD08_RS07170 IPR005583 Uncharacterised protein family UPF0246 RD08_RS07175 IPR011701 Major facilitator superfamily RD08_RS07175 IPR020846 Major facilitator superfamily domain RD08_RS07180 IPR032692 RD08_RS07180 RD08_RS07185 IPR001584 Integrase, catalytic core RD08_RS07185 IPR009057 Homeodomain-like RD08_RS07185 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07185 IPR012337 Ribonuclease H-like domain RD08_RS07185 IPR024967 DNA-binding domain, IS481-type RD08_RS07190 IPR000160 GGDEF domain RD08_RS07190 IPR003018 GAF domain RD08_RS07190 IPR029016 GAF domain-like RD08_RS07190 IPR029787 Nucleotide cyclase RD08_RS07195 IPR001584 Integrase, catalytic core RD08_RS07195 IPR009057 Homeodomain-like RD08_RS07195 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07195 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07195 IPR012337 Ribonuclease H-like domain RD08_RS07195 IPR024967 DNA-binding domain, IS481-type RD08_RS07200 IPR010723 HemN, C-terminal domain RD08_RS07210 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS07210 IPR001789 Signal transduction response regulator, receiver domain RD08_RS07210 IPR011006 CheY-like superfamily RD08_RS07210 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07210 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS07215 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD08_RS07215 IPR002320 Threonine-tRNA ligase, class IIa RD08_RS07215 IPR004095 TGS RD08_RS07215 IPR004154 Anticodon-binding RD08_RS07215 IPR012675 Beta-grasp domain RD08_RS07215 IPR012676 TGS-like RD08_RS07215 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RD08_RS07215 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RD08_RS07220 IPR001288 Translation initiation factor 3 RD08_RS07220 IPR019813 Translation initiation factor 3, conserved site RD08_RS07220 IPR019814 Translation initiation factor 3, N-terminal RD08_RS07220 IPR019815 Translation initiation factor 3, C-terminal RD08_RS07225 IPR004215 Prokaryotic glutathione synthetase, N-terminal RD08_RS07225 IPR004218 Prokaryotic glutathione synthetase, ATP-binding RD08_RS07225 IPR006284 Glutathione synthetase, prokaryotic RD08_RS07225 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS07225 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS07225 IPR016185 Pre-ATP-grasp domain RD08_RS07230 IPR004701 Phosphotransferase system, mannose-type IIA component RD08_RS07235 IPR000032 Phosphocarrier HPr protein-like RD08_RS07235 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RD08_RS07235 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RD08_RS07240 IPR000121 PEP-utilising enzyme, C-terminal RD08_RS07240 IPR006318 Phosphoenolpyruvate-utilising enzyme RD08_RS07240 IPR008279 PEP-utilising enzyme, mobile domain RD08_RS07240 IPR008731 Phosphotransferase system, enzyme I N-terminal RD08_RS07240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS07240 IPR018274 PEP-utilising enzyme, active site RD08_RS07240 IPR023151 PEP-utilising enzyme, conserved site RD08_RS07240 IPR024692 Phosphotransferase system, enzyme I RD08_RS07250 IPR003462 Ornithine cyclodeaminase/mu-crystallin RD08_RS07250 IPR016040 NAD(P)-binding domain RD08_RS07250 IPR023401 Ornithine cyclodeaminase, N-terminal RD08_RS07255 IPR028081 Leucine-binding protein domain RD08_RS07255 IPR028082 Periplasmic binding protein-like I RD08_RS07260 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS07260 IPR014337 Ectoine/hydroxyEctoine ABC transporter solute-binding protein EhuB RD08_RS07265 IPR000515 MetI-like domain RD08_RS07265 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS07265 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC RD08_RS07270 IPR000515 MetI-like domain RD08_RS07270 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS07270 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD RD08_RS07275 IPR003439 ABC transporter-like RD08_RS07275 IPR003593 AAA+ ATPase domain RD08_RS07275 IPR017871 ABC transporter, conserved site RD08_RS07275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07275 IPR030679 RD08_RS07275 RD08_RS07280 IPR001584 Integrase, catalytic core RD08_RS07280 IPR009057 Homeodomain-like RD08_RS07280 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07280 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07280 IPR012337 Ribonuclease H-like domain RD08_RS07280 IPR024967 DNA-binding domain, IS481-type RD08_RS07285 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD08_RS07285 IPR011057 Mss4-like RD08_RS07290 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD08_RS07290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD08_RS07290 IPR016040 NAD(P)-binding domain RD08_RS07290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD08_RS07295 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RD08_RS07300 IPR003211 AmiS/UreI transporter RD08_RS07305 IPR004304 Acetamidase/Formamidase RD08_RS07310 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS07310 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07310 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS07310 IPR029016 GAF domain-like RD08_RS07315 IPR011037 Pyruvate kinase-like, insert domain RD08_RS07315 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RD08_RS07320 IPR000771 Ketose-bisphosphate aldolase, class-II RD08_RS07320 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype RD08_RS07320 IPR013785 Aldolase-type TIM barrel RD08_RS07325 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD08_RS07325 IPR011057 Mss4-like RD08_RS07330 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RD08_RS07330 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS07330 IPR018236 SAICAR synthetase, conserved site RD08_RS07330 IPR028923 SAICAR synthetase/ADE2, N-terminal RD08_RS07335 IPR031451 RD08_RS07335 RD08_RS07340 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS07340 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07340 IPR022452 Zinc finger/helix-turn-helix protein, YgiT RD08_RS07340 IPR022453 Zinc finger, YgiT-type RD08_RS07340 IPR032758 RD08_RS07340 RD08_RS07345 IPR003752 Disulphide bond formation protein DsbB/BdbC RD08_RS07345 IPR023380 Disulphide bond formation protein DsbB-like domain RD08_RS07350 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain RD08_RS07350 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE RD08_RS07355 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD08_RS07355 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RD08_RS07355 IPR011054 Rudiment single hybrid motif RD08_RS07355 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS07355 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS07355 IPR016185 Pre-ATP-grasp domain RD08_RS07360 IPR005145 Putative GTP-binding controlling metal-binding domain RD08_RS07360 IPR006070 YrdC-like domain RD08_RS07360 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RD08_RS07360 IPR017945 DHBP synthase RibB-like alpha/beta domain RD08_RS07365 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS07370 IPR005471 Transcription regulator IclR, N-terminal RD08_RS07370 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07370 IPR014757 Transcription regulator IclR, C-terminal RD08_RS07370 IPR029016 GAF domain-like RD08_RS07375 IPR006035 Ureohydrolase RD08_RS07375 IPR023696 Ureohydrolase domain RD08_RS07380 IPR001320 Ionotropic glutamate receptor RD08_RS07380 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS07385 IPR000515 MetI-like domain RD08_RS07385 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS07390 IPR003439 ABC transporter-like RD08_RS07390 IPR003593 AAA+ ATPase domain RD08_RS07390 IPR017871 ABC transporter, conserved site RD08_RS07390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07390 IPR030679 RD08_RS07390 RD08_RS07395 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS07395 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS07395 IPR029061 Thiamin diphosphate-binding fold RD08_RS07400 IPR002539 MaoC-like domain RD08_RS07400 IPR029069 HotDog domain RD08_RS07405 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS07405 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS07405 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS07405 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS07405 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS07410 IPR000399 TPP-binding enzyme, conserved site RD08_RS07410 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS07410 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS07410 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS07410 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS07410 IPR029061 Thiamin diphosphate-binding fold RD08_RS07415 IPR000847 Transcription regulator HTH, LysR RD08_RS07415 IPR005119 LysR, substrate-binding RD08_RS07415 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07420 IPR002104 Integrase, catalytic RD08_RS07420 IPR004107 Integrase, SAM-like, N-terminal RD08_RS07420 IPR010998 Integrase, Lambda-type, N-terminal RD08_RS07420 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD08_RS07420 IPR011932 Tyrosine recombinase XerD RD08_RS07420 IPR013762 Integrase-like, catalytic core RD08_RS07420 IPR023009 Tyrosine recombinase XerC/XerD RD08_RS07420 IPR023109 Integrase/recombinase, N-terminal RD08_RS07425 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RD08_RS07425 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RD08_RS07430 IPR002818 ThiJ/PfpI RD08_RS07430 IPR006286 Peptidase C56, PfpI RD08_RS07430 IPR029062 Class I glutamine amidotransferase-like RD08_RS07435 IPR027373 Ribbon-helix-helix domain RD08_RS07440 IPR001584 Integrase, catalytic core RD08_RS07440 IPR009057 Homeodomain-like RD08_RS07440 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07440 IPR012337 Ribonuclease H-like domain RD08_RS07440 IPR024967 DNA-binding domain, IS481-type RD08_RS07445 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RD08_RS07445 IPR012338 Beta-lactamase/transpeptidase-like RD08_RS07445 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RD08_RS07455 IPR011701 Major facilitator superfamily RD08_RS07455 IPR020846 Major facilitator superfamily domain RD08_RS07460 IPR019925 DNA repair protein, predicted RD08_RS07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07465 IPR000212 DNA helicase, UvrD/REP type RD08_RS07465 IPR011335 Restriction endonuclease type II-like RD08_RS07465 IPR014016 UvrD-like Helicase, ATP-binding domain RD08_RS07465 IPR014017 DNA helicase, UvrD-like, C-terminal RD08_RS07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07475 IPR003593 AAA+ ATPase domain RD08_RS07475 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD08_RS07475 IPR012763 DNA polymerase III, subunit gamma/ tau RD08_RS07475 IPR022754 DNA polymerase III, gamma subunit, domain III RD08_RS07475 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07480 IPR004401 Nucleoid-associated protein YbaB RD08_RS07485 IPR000093 DNA recombination protein RecR RD08_RS07485 IPR006171 Toprim domain RD08_RS07485 IPR023627 Recombination protein RecR RD08_RS07485 IPR023628 Recombination protein RecR, C4-type zinc finger RD08_RS07490 IPR001584 Integrase, catalytic core RD08_RS07490 IPR009057 Homeodomain-like RD08_RS07490 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07490 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07490 IPR012337 Ribonuclease H-like domain RD08_RS07490 IPR024967 DNA-binding domain, IS481-type RD08_RS07505 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RD08_RS07510 IPR006070 YrdC-like domain RD08_RS07510 IPR017945 DHBP synthase RibB-like alpha/beta domain RD08_RS07515 IPR001584 Integrase, catalytic core RD08_RS07515 IPR009057 Homeodomain-like RD08_RS07515 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07515 IPR012337 Ribonuclease H-like domain RD08_RS07515 IPR024967 DNA-binding domain, IS481-type RD08_RS07520 IPR001584 Integrase, catalytic core RD08_RS07520 IPR009057 Homeodomain-like RD08_RS07520 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07520 IPR012337 Ribonuclease H-like domain RD08_RS07520 IPR024967 DNA-binding domain, IS481-type RD08_RS07525 IPR008311 Uncharacterised conserved protein UCP028101 RD08_RS07525 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RD08_RS07525 IPR015943 WD40/YVTN repeat-like-containing domain RD08_RS07535 IPR009056 Cytochrome c-like domain RD08_RS07535 IPR010538 Protein of unknown function DUF1111 RD08_RS07545 IPR011008 Dimeric alpha-beta barrel RD08_RS07550 IPR005025 NADPH-dependent FMN reductase-like RD08_RS07550 IPR029039 Flavoprotein-like RD08_RS07555 IPR009923 Dodecin RD08_RS07555 IPR025543 Dodecin-like RD08_RS07560 IPR000432 DNA mismatch repair protein MutS, C-terminal RD08_RS07560 IPR005748 DNA mismatch repair protein MutS, type 1 RD08_RS07560 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RD08_RS07560 IPR007696 DNA mismatch repair protein MutS, core RD08_RS07560 IPR007860 DNA mismatch repair protein MutS, connector domain RD08_RS07560 IPR007861 DNA mismatch repair protein MutS, clamp RD08_RS07560 IPR016151 DNA mismatch repair protein MutS, N-terminal RD08_RS07560 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07565 IPR003347 JmjC domain RD08_RS07570 IPR000259 Fimbrial-type adhesion domain RD08_RS07570 IPR008966 Adhesion domain RD08_RS07575 IPR010653 Lipoprotein, NlpB RD08_RS07580 IPR002220 DapA-like RD08_RS07580 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RD08_RS07580 IPR013785 Aldolase-type TIM barrel RD08_RS07580 IPR020624 Dihydrodipicolinate synthetase, conserved site RD08_RS07580 IPR020625 Dihydrodipicolinate synthetase, active site RD08_RS07590 IPR001584 Integrase, catalytic core RD08_RS07590 IPR009057 Homeodomain-like RD08_RS07590 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07590 IPR012337 Ribonuclease H-like domain RD08_RS07590 IPR024967 DNA-binding domain, IS481-type RD08_RS07595 IPR001320 Ionotropic glutamate receptor RD08_RS07595 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS07595 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD08_RS07600 IPR000515 MetI-like domain RD08_RS07600 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS07605 IPR003439 ABC transporter-like RD08_RS07605 IPR003593 AAA+ ATPase domain RD08_RS07605 IPR017871 ABC transporter, conserved site RD08_RS07605 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07605 IPR030679 RD08_RS07605 RD08_RS07610 IPR002912 ACT domain RD08_RS07610 IPR003607 HD/PDEase domain RD08_RS07610 IPR004095 TGS RD08_RS07610 IPR004811 RelA/SpoT family RD08_RS07610 IPR007685 RelA/SpoT RD08_RS07610 IPR012675 Beta-grasp domain RD08_RS07610 IPR012676 TGS-like RD08_RS07615 IPR003716 DNA-directed RNA polymerase, omega subunit RD08_RS07615 IPR006110 RNA polymerase, subunit omega/K/RPB6 RD08_RS07615 IPR012293 RNA polymerase subunit, RPB6/omega RD08_RS07620 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RD08_RS07620 IPR017665 Guanylate kinase RD08_RS07620 IPR020590 Guanylate kinase, conserved site RD08_RS07620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07625 IPR009056 Cytochrome c-like domain RD08_RS07630 IPR008168 Cytochrome c, class IC RD08_RS07630 IPR009056 Cytochrome c-like domain RD08_RS07630 IPR024167 Cytochrome c4 RD08_RS07635 IPR002347 Glucose/ribitol dehydrogenase RD08_RS07635 IPR016040 NAD(P)-binding domain RD08_RS07635 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS07640 IPR000064 Endopeptidase, NLPC/P60 domain RD08_RS07645 IPR000845 Nucleoside phosphorylase domain RD08_RS07645 IPR011271 AMP nucleosidase RD08_RS07645 IPR018017 Nucleoside phosphorylase RD08_RS07645 IPR018953 AMP nucleoside phosphorylase, N-terminal RD08_RS07650 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS07650 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07665 IPR005229 Conserved hypothetical protein CHP00255 RD08_RS07665 IPR013527 YicC-like, N-terminal RD08_RS07665 IPR013551 Domain of unknown function DUF1732 RD08_RS07670 IPR001247 Exoribonuclease, phosphorolytic domain 1 RD08_RS07670 IPR002381 Ribonuclease phosphorolytic, bacterial-type RD08_RS07670 IPR015847 Exoribonuclease, phosphorolytic domain 2 RD08_RS07670 IPR018336 Ribonuclease PH, conserved site RD08_RS07670 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS07670 IPR027408 PNPase/RNase PH domain RD08_RS07675 IPR005656 MmgE/PrpD RD08_RS07680 IPR000847 Transcription regulator HTH, LysR RD08_RS07680 IPR005119 LysR, substrate-binding RD08_RS07680 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07685 IPR000160 GGDEF domain RD08_RS07685 IPR001633 EAL domain RD08_RS07685 IPR029787 Nucleotide cyclase RD08_RS07690 IPR002637 Ham1-like protein RD08_RS07690 IPR020922 Non-canonical purine NTP pyrophosphatase RD08_RS07690 IPR029001 Inosine triphosphate pyrophosphatase-like RD08_RS07695 IPR001584 Integrase, catalytic core RD08_RS07695 IPR009057 Homeodomain-like RD08_RS07695 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07695 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07695 IPR012337 Ribonuclease H-like domain RD08_RS07695 IPR024967 DNA-binding domain, IS481-type RD08_RS07700 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related RD08_RS07700 IPR006638 Elongator protein 3/MiaB/NifB RD08_RS07700 IPR007197 Radical SAM RD08_RS07700 IPR010723 HemN, C-terminal domain RD08_RS07700 IPR023404 Radical SAM, alpha/beta horseshoe RD08_RS07705 IPR001637 Glutamine synthetase class-I, adenylation site RD08_RS07705 IPR004809 Glutamine synthetase type I RD08_RS07705 IPR008146 Glutamine synthetase, catalytic domain RD08_RS07705 IPR008147 Glutamine synthetase, beta-Grasp RD08_RS07705 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RD08_RS07705 IPR027302 Glutamine synthetase, N-terminal conserved site RD08_RS07705 IPR027303 Glutamine synthetase, glycine-rich site RD08_RS07710 IPR000014 PAS domain RD08_RS07710 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS07710 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS07710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS07710 IPR013656 PAS fold-4 RD08_RS07715 IPR001789 Signal transduction response regulator, receiver domain RD08_RS07715 IPR002078 RNA polymerase sigma factor 54 interaction domain RD08_RS07715 IPR002197 DNA binding HTH domain, Fis-type RD08_RS07715 IPR003593 AAA+ ATPase domain RD08_RS07715 IPR009057 Homeodomain-like RD08_RS07715 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) RD08_RS07715 IPR011006 CheY-like superfamily RD08_RS07715 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD08_RS07715 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD08_RS07715 IPR025944 Sigma-54 interaction domain, conserved site RD08_RS07715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07720 IPR000847 Transcription regulator HTH, LysR RD08_RS07720 IPR005119 LysR, substrate-binding RD08_RS07720 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07725 IPR003829 Pirin, N-terminal domain RD08_RS07725 IPR011051 RmlC-like cupin domain RD08_RS07725 IPR012093 Pirin RD08_RS07725 IPR014710 RmlC-like jelly roll fold RD08_RS07730 IPR003829 Pirin, N-terminal domain RD08_RS07730 IPR008778 Pirin, C-terminal domain RD08_RS07730 IPR011051 RmlC-like cupin domain RD08_RS07730 IPR012093 Pirin RD08_RS07730 IPR014710 RmlC-like jelly roll fold RD08_RS07735 IPR001584 Integrase, catalytic core RD08_RS07735 IPR009057 Homeodomain-like RD08_RS07735 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07735 IPR012337 Ribonuclease H-like domain RD08_RS07735 IPR024967 DNA-binding domain, IS481-type RD08_RS07740 IPR003439 ABC transporter-like RD08_RS07740 IPR003593 AAA+ ATPase domain RD08_RS07740 IPR017871 ABC transporter, conserved site RD08_RS07740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07745 IPR000515 MetI-like domain RD08_RS07750 IPR026045 Ferric binding protein RD08_RS07755 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS07755 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD08_RS07755 IPR008333 Oxidoreductase, FAD-binding domain RD08_RS07755 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS07760 IPR000847 Transcription regulator HTH, LysR RD08_RS07760 IPR005119 LysR, substrate-binding RD08_RS07760 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07770 IPR001395 Aldo/keto reductase RD08_RS07770 IPR018170 Aldo/keto reductase, conserved site RD08_RS07770 IPR020471 Aldo/keto reductase subgroup RD08_RS07770 IPR023210 NADP-dependent oxidoreductase domain RD08_RS07780 IPR006056 Enamine/imine deaminase YjgF-like RD08_RS07780 IPR006175 YjgF/Yer057p/UK114 family RD08_RS07780 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS07785 IPR001650 Helicase, C-terminal RD08_RS07785 IPR004609 ATP-dependent DNA helicase RecG RD08_RS07785 IPR011545 DEAD/DEAH box helicase domain RD08_RS07785 IPR012340 Nucleic acid-binding, OB-fold RD08_RS07785 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07785 IPR033454 RD08_RS07785 RD08_RS07790 IPR000847 Transcription regulator HTH, LysR RD08_RS07790 IPR005119 LysR, substrate-binding RD08_RS07790 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07795 IPR000847 Transcription regulator HTH, LysR RD08_RS07795 IPR005119 LysR, substrate-binding RD08_RS07795 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07800 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD08_RS07800 IPR015590 Aldehyde dehydrogenase domain RD08_RS07800 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS07800 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS07800 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS07800 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS07805 IPR002177 DNA-binding protein Dps RD08_RS07805 IPR008331 Ferritin/DPS protein domain RD08_RS07805 IPR009078 Ferritin-like superfamily RD08_RS07805 IPR012347 Ferritin-related RD08_RS07805 IPR023188 DNA-binding protein Dps, conserved site RD08_RS07810 IPR011990 Tetratricopeptide-like helical domain RD08_RS07825 IPR000412 ABC-2 transporter RD08_RS07825 IPR013525 ABC-2 type transporter RD08_RS07830 IPR003439 ABC transporter-like RD08_RS07830 IPR003593 AAA+ ATPase domain RD08_RS07830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07835 IPR003856 Lipopolysaccharide biosynthesis RD08_RS07840 IPR001296 Glycosyl transferase, family 1 RD08_RS07840 IPR011990 Tetratricopeptide-like helical domain RD08_RS07840 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS07850 IPR003715 Polysaccharide export protein RD08_RS07850 IPR019554 Soluble ligand binding domain RD08_RS07855 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD08_RS07855 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS07855 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD08_RS07855 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD08_RS07855 IPR016040 NAD(P)-binding domain RD08_RS07855 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD08_RS07855 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RD08_RS07860 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD08_RS07860 IPR008089 Nucleotide sugar epimerase RD08_RS07860 IPR016040 NAD(P)-binding domain RD08_RS07865 IPR007833 Capsule polysaccharide biosynthesis RD08_RS07870 IPR007833 Capsule polysaccharide biosynthesis RD08_RS07875 IPR001584 Integrase, catalytic core RD08_RS07875 IPR009057 Homeodomain-like RD08_RS07875 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07875 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07875 IPR012337 Ribonuclease H-like domain RD08_RS07875 IPR024967 DNA-binding domain, IS481-type RD08_RS07880 IPR002347 Glucose/ribitol dehydrogenase RD08_RS07880 IPR016040 NAD(P)-binding domain RD08_RS07880 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS07885 IPR000917 Sulfatase RD08_RS07885 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD08_RS07885 IPR017850 Alkaline-phosphatase-like, core domain RD08_RS07890 IPR001584 Integrase, catalytic core RD08_RS07890 IPR009057 Homeodomain-like RD08_RS07890 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07890 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07890 IPR012337 Ribonuclease H-like domain RD08_RS07890 IPR024967 DNA-binding domain, IS481-type RD08_RS07895 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD08_RS07895 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD08_RS07895 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS07895 IPR028202 Reductase, C-terminal RD08_RS07900 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS07900 IPR009057 Homeodomain-like RD08_RS07900 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS07900 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS07905 IPR003439 ABC transporter-like RD08_RS07905 IPR003593 AAA+ ATPase domain RD08_RS07905 IPR017871 ABC transporter, conserved site RD08_RS07905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07910 IPR003439 ABC transporter-like RD08_RS07910 IPR003593 AAA+ ATPase domain RD08_RS07910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07910 IPR032823 RD08_RS07910 RD08_RS07920 IPR001584 Integrase, catalytic core RD08_RS07920 IPR009057 Homeodomain-like RD08_RS07920 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07920 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS07920 IPR012337 Ribonuclease H-like domain RD08_RS07920 IPR024967 DNA-binding domain, IS481-type RD08_RS07925 IPR005496 Integral membrane protein TerC RD08_RS07925 IPR022301 Integral membrane protein YjbE RD08_RS07930 IPR002347 Glucose/ribitol dehydrogenase RD08_RS07930 IPR016040 NAD(P)-binding domain RD08_RS07930 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS07935 IPR005064 Bordetella uptake gene RD08_RS07940 IPR025737 MetA-pathway of phenol degradation, putative RD08_RS07950 IPR011703 ATPase, AAA-3 RD08_RS07950 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RD08_RS07950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS07955 IPR002881 Domain of unknown function DUF58 RD08_RS07960 IPR002035 von Willebrand factor, type A RD08_RS07965 IPR002035 von Willebrand factor, type A RD08_RS07965 IPR011990 Tetratricopeptide-like helical domain RD08_RS07965 IPR013105 Tetratricopeptide TPR2 RD08_RS07965 IPR019734 Tetratricopeptide repeat RD08_RS07970 IPR025738 Aerotolerance-related protein BatD RD08_RS07975 IPR023214 HAD-like domain RD08_RS07980 IPR000917 Sulfatase RD08_RS07980 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD08_RS07980 IPR017850 Alkaline-phosphatase-like, core domain RD08_RS07985 IPR020846 Major facilitator superfamily domain RD08_RS07990 IPR001584 Integrase, catalytic core RD08_RS07990 IPR009057 Homeodomain-like RD08_RS07990 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS07990 IPR012337 Ribonuclease H-like domain RD08_RS07990 IPR024967 DNA-binding domain, IS481-type RD08_RS08000 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS08000 IPR011623 7TM-DISM receptor, extracellular domain, type 1 RD08_RS08005 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS08005 IPR001789 Signal transduction response regulator, receiver domain RD08_RS08005 IPR011006 CheY-like superfamily RD08_RS08005 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08005 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS08010 IPR005546 Autotransporter beta-domain RD08_RS08010 IPR006315 Outer membrane autotransporter barrel RD08_RS08010 IPR011050 Pectin lyase fold/virulence factor RD08_RS08010 IPR013425 Autotransporter-associated beta strand repeat RD08_RS08015 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS08015 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08020 IPR009387 Toxin HigB RD08_RS08025 IPR004045 Glutathione S-transferase, N-terminal RD08_RS08025 IPR004046 Glutathione S-transferase, C-terminal RD08_RS08025 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS08025 IPR012336 Thioredoxin-like fold RD08_RS08030 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD08_RS08035 IPR005119 LysR, substrate-binding RD08_RS08040 IPR005064 Bordetella uptake gene RD08_RS08045 IPR002347 Glucose/ribitol dehydrogenase RD08_RS08045 IPR016040 NAD(P)-binding domain RD08_RS08050 IPR000262 FMN-dependent dehydrogenase RD08_RS08050 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD08_RS08050 IPR013785 Aldolase-type TIM barrel RD08_RS08055 IPR011234 Fumarylacetoacetase, C-terminal-related RD08_RS08060 IPR002347 Glucose/ribitol dehydrogenase RD08_RS08060 IPR016040 NAD(P)-binding domain RD08_RS08065 IPR002347 Glucose/ribitol dehydrogenase RD08_RS08065 IPR016040 NAD(P)-binding domain RD08_RS08065 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS08070 IPR005064 Bordetella uptake gene RD08_RS08075 IPR000847 Transcription regulator HTH, LysR RD08_RS08075 IPR005119 LysR, substrate-binding RD08_RS08075 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08080 IPR005064 Bordetella uptake gene RD08_RS08095 IPR001584 Integrase, catalytic core RD08_RS08095 IPR009057 Homeodomain-like RD08_RS08095 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08095 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08095 IPR012337 Ribonuclease H-like domain RD08_RS08095 IPR024967 DNA-binding domain, IS481-type RD08_RS08105 IPR005025 NADPH-dependent FMN reductase-like RD08_RS08105 IPR014063 Arsenate resistance ArsH RD08_RS08105 IPR029039 Flavoprotein-like RD08_RS08115 IPR011701 Major facilitator superfamily RD08_RS08115 IPR020846 Major facilitator superfamily domain RD08_RS08120 IPR001845 HTH ArsR-type DNA-binding domain RD08_RS08120 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08130 IPR005064 Bordetella uptake gene RD08_RS08135 IPR002347 Glucose/ribitol dehydrogenase RD08_RS08135 IPR016040 NAD(P)-binding domain RD08_RS08135 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS08140 IPR000847 Transcription regulator HTH, LysR RD08_RS08140 IPR005119 LysR, substrate-binding RD08_RS08140 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08150 IPR001584 Integrase, catalytic core RD08_RS08150 IPR009057 Homeodomain-like RD08_RS08150 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08150 IPR012337 Ribonuclease H-like domain RD08_RS08150 IPR024967 DNA-binding domain, IS481-type RD08_RS08155 IPR005064 Bordetella uptake gene RD08_RS08160 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RD08_RS08160 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD08_RS08160 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RD08_RS08160 IPR025383 Domain of unknown function DUF4040 RD08_RS08165 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RD08_RS08170 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD08_RS08175 IPR002758 Na+/H+ antiporter subunit E RD08_RS08180 IPR007208 Na(+)/H(+) antiporter subunit F-like RD08_RS08185 IPR005133 Na+/H+ antiporter subunit G RD08_RS08190 IPR001584 Integrase, catalytic core RD08_RS08190 IPR009057 Homeodomain-like RD08_RS08190 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08190 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08190 IPR012337 Ribonuclease H-like domain RD08_RS08190 IPR024967 DNA-binding domain, IS481-type RD08_RS08200 IPR023214 HAD-like domain RD08_RS08205 IPR016192 APOBEC/CMP deaminase, zinc-binding RD08_RS08205 IPR016193 Cytidine deaminase-like RD08_RS08205 IPR028883 tRNA-specific adenosine deaminase RD08_RS08210 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RD08_RS08210 IPR027461 LD-carboxypeptidase A, C-terminal domain RD08_RS08210 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RD08_RS08210 IPR029062 Class I glutamine amidotransferase-like RD08_RS08215 IPR001753 Crotonase superfamily RD08_RS08215 IPR014748 Crontonase, C-terminal RD08_RS08215 IPR029045 ClpP/crotonase-like domain RD08_RS08220 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS08225 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS08230 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS08230 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD08_RS08235 IPR003439 ABC transporter-like RD08_RS08235 IPR003593 AAA+ ATPase domain RD08_RS08235 IPR017871 ABC transporter, conserved site RD08_RS08235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08235 IPR032781 RD08_RS08235 RD08_RS08240 IPR003439 ABC transporter-like RD08_RS08240 IPR003593 AAA+ ATPase domain RD08_RS08240 IPR017871 ABC transporter, conserved site RD08_RS08240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08245 IPR015168 SsuA/THI5-like RD08_RS08250 IPR000515 MetI-like domain RD08_RS08255 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS08260 IPR001584 Integrase, catalytic core RD08_RS08260 IPR009057 Homeodomain-like RD08_RS08260 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08260 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08260 IPR012337 Ribonuclease H-like domain RD08_RS08260 IPR024967 DNA-binding domain, IS481-type RD08_RS08265 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RD08_RS08265 IPR019004 Uncharacterised domain YOR215C, mitochondrial RD08_RS08265 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RD08_RS08270 IPR000971 Globin RD08_RS08270 IPR001221 Phenol hydroxylase reductase RD08_RS08270 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS08270 IPR008333 Oxidoreductase, FAD-binding domain RD08_RS08270 IPR009050 Globin-like RD08_RS08270 IPR012292 Globin, structural domain RD08_RS08270 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS08270 IPR023950 Flavohemoprotein RD08_RS08275 IPR000944 Transcription regulator Rrf2-like RD08_RS08275 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08280 IPR006076 FAD dependent oxidoreductase RD08_RS08280 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS08290 IPR001584 Integrase, catalytic core RD08_RS08290 IPR009057 Homeodomain-like RD08_RS08290 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08290 IPR012337 Ribonuclease H-like domain RD08_RS08290 IPR024967 DNA-binding domain, IS481-type RD08_RS08295 IPR017703 YgfZ/GcvT conserved site RD08_RS08300 IPR003770 Uncharacterised protein family UPF0755, YceG-like RD08_RS08300 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain RD08_RS08305 IPR018094 Thymidylate kinase RD08_RS08305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08310 IPR004622 DNA polymerase III, delta prime subunit RD08_RS08310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08315 IPR001130 TatD family RD08_RS08315 IPR015991 Uncharacterised deoxyribonuclease TatD-type RD08_RS08315 IPR018228 Deoxyribonuclease, TatD-related, conserved site RD08_RS08315 IPR032466 RD08_RS08315 RD08_RS08320 IPR002110 Ankyrin repeat RD08_RS08320 IPR020683 Ankyrin repeat-containing domain RD08_RS08325 IPR005471 Transcription regulator IclR, N-terminal RD08_RS08325 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08325 IPR014757 Transcription regulator IclR, C-terminal RD08_RS08325 IPR029016 GAF domain-like RD08_RS08330 IPR001320 Ionotropic glutamate receptor RD08_RS08330 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS08330 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD08_RS08340 IPR003439 ABC transporter-like RD08_RS08340 IPR003593 AAA+ ATPase domain RD08_RS08340 IPR017871 ABC transporter, conserved site RD08_RS08340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08340 IPR030679 RD08_RS08340 RD08_RS08345 IPR023696 Ureohydrolase domain RD08_RS08350 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RD08_RS08350 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RD08_RS08350 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RD08_RS08350 IPR014362 Glutamate dehydrogenase RD08_RS08350 IPR016040 NAD(P)-binding domain RD08_RS08355 IPR015590 Aldehyde dehydrogenase domain RD08_RS08355 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS08355 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS08355 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS08355 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS08355 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD08_RS08360 IPR002933 Peptidase M20 RD08_RS08360 IPR010158 Amidase, hydantoinase/carbamoylase RD08_RS08360 IPR011650 Peptidase M20, dimerisation domain RD08_RS08365 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS08365 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS08365 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS08365 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS08365 IPR029061 Thiamin diphosphate-binding fold RD08_RS08370 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD08_RS08370 IPR011206 Citrate lyase beta subunit-like RD08_RS08370 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS08375 IPR004681 TRAP transporter permease protein RD08_RS08375 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS08380 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS08385 IPR004682 TRAP dicarboxylate transporter RD08_RS08385 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS08390 IPR000524 Transcription regulator HTH, GntR RD08_RS08390 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS08390 IPR011711 GntR, C-terminal RD08_RS08390 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08395 IPR001584 Integrase, catalytic core RD08_RS08395 IPR009057 Homeodomain-like RD08_RS08395 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08395 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08395 IPR012337 Ribonuclease H-like domain RD08_RS08395 IPR024967 DNA-binding domain, IS481-type RD08_RS08400 IPR007438 Protein of unknown function DUF488 RD08_RS08405 IPR001584 Integrase, catalytic core RD08_RS08405 IPR012337 Ribonuclease H-like domain RD08_RS08420 IPR000120 Amidase RD08_RS08420 IPR023631 Amidase signature domain RD08_RS08425 IPR009906 Protein of unknown function DUF1445 RD08_RS08425 IPR016938 Uncharacterised protein family UPF0317 RD08_RS08430 IPR001633 EAL domain RD08_RS08435 IPR000014 PAS domain RD08_RS08435 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS08435 IPR001789 Signal transduction response regulator, receiver domain RD08_RS08435 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS08435 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS08435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS08435 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RD08_RS08435 IPR011006 CheY-like superfamily RD08_RS08435 IPR013767 PAS fold RD08_RS08440 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS08440 IPR001789 Signal transduction response regulator, receiver domain RD08_RS08440 IPR011006 CheY-like superfamily RD08_RS08440 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08445 IPR008619 Filamentous haemagglutinin repeat RD08_RS08445 IPR008638 Filamentous haemagglutinin, N-terminal RD08_RS08445 IPR011050 Pectin lyase fold/virulence factor RD08_RS08445 IPR012334 Pectin lyase fold RD08_RS08445 IPR024973 ESPR domain RD08_RS08445 IPR025157 Haemagluttinin repeat RD08_RS08450 IPR000259 Fimbrial-type adhesion domain RD08_RS08450 IPR008966 Adhesion domain RD08_RS08455 IPR001829 Pili assembly chaperone, bacterial RD08_RS08455 IPR008962 PapD-like RD08_RS08455 IPR016147 PapD, N-terminal, bacterial RD08_RS08455 IPR016148 Pili assembly chaperone, C-terminal domain RD08_RS08455 IPR018046 Pili assembly chaperone, conserved site RD08_RS08460 IPR000015 Outer membrane usher protein RD08_RS08460 IPR018030 Fimbrial membrane usher, conserved site RD08_RS08460 IPR025885 PapC, N-terminal domain RD08_RS08460 IPR025949 PapC-like, C-terminal domain RD08_RS08465 IPR000259 Fimbrial-type adhesion domain RD08_RS08465 IPR008966 Adhesion domain RD08_RS08470 IPR005565 Haemolysin activator HlyB RD08_RS08470 IPR013686 Polypeptide-transport-associated, ShlB-type RD08_RS08470 IPR027282 Two partner secretion pathway transporter RD08_RS08480 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS08485 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS08495 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS08500 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS08510 IPR000847 Transcription regulator HTH, LysR RD08_RS08510 IPR005119 LysR, substrate-binding RD08_RS08510 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08515 IPR000835 MarR-type HTH domain RD08_RS08515 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08515 IPR014601 Transcriptional regulator with MarR-type HTH domain RD08_RS08520 IPR002821 Hydantoinase/oxoprolinase RD08_RS08520 IPR003692 Hydantoinase B/oxoprolinase RD08_RS08520 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD08_RS08525 IPR005079 Peptidase C45 RD08_RS08535 IPR006685 Mechanosensitive ion channel MscS RD08_RS08535 IPR010920 Like-Sm (LSM) domain RD08_RS08535 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RD08_RS08535 IPR011066 Mechanosensitive ion channel MscS, C-terminal RD08_RS08540 IPR005471 Transcription regulator IclR, N-terminal RD08_RS08540 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08540 IPR014757 Transcription regulator IclR, C-terminal RD08_RS08540 IPR029016 GAF domain-like RD08_RS08545 IPR005064 Bordetella uptake gene RD08_RS08550 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD08_RS08550 IPR004384 RNA methyltransferase TrmH, group 1 RD08_RS08550 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD08_RS08550 IPR029028 Alpha/beta knot methyltransferases RD08_RS08555 IPR000760 Inositol monophosphatase RD08_RS08555 IPR020550 Inositol monophosphatase, conserved site RD08_RS08555 IPR020583 Inositol monophosphatase, metal-binding site RD08_RS08555 IPR022337 Inositol monophosphatase, SuhB RD08_RS08560 IPR000644 CBS domain RD08_RS08560 IPR005170 Transporter-associated domain RD08_RS08560 IPR005496 Integral membrane protein TerC RD08_RS08560 IPR016166 FAD-binding, type 2 RD08_RS08560 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS08565 IPR003824 Undecaprenyl-diphosphatase UppP RD08_RS08570 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD08_RS08570 IPR010138 UDP-2,3-diacylglucosamine hydrolase RD08_RS08570 IPR029052 Metallo-dependent phosphatase-like RD08_RS08575 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RD08_RS08575 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RD08_RS08575 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RD08_RS08575 IPR029000 Cyclophilin-like domain RD08_RS08580 IPR011990 Tetratricopeptide-like helical domain RD08_RS08580 IPR019734 Tetratricopeptide repeat RD08_RS08585 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD08_RS08585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS08585 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RD08_RS08585 IPR015803 Cysteine-tRNA ligase RD08_RS08585 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RD08_RS08585 IPR032678 RD08_RS08585 RD08_RS08590 IPR003265 HhH-GPD domain RD08_RS08590 IPR011257 DNA glycosylase RD08_RS08590 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD08_RS08595 IPR001095 Acetyl-CoA carboxylase, alpha subunit RD08_RS08595 IPR029045 ClpP/crotonase-like domain RD08_RS08600 IPR001584 Integrase, catalytic core RD08_RS08600 IPR009057 Homeodomain-like RD08_RS08600 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08600 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08600 IPR012337 Ribonuclease H-like domain RD08_RS08600 IPR024967 DNA-binding domain, IS481-type RD08_RS08605 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RD08_RS08605 IPR012094 Lysidine-tRNA(Ile) synthetase RD08_RS08605 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal RD08_RS08605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS08605 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain RD08_RS08610 IPR001048 Aspartate/glutamate/uridylate kinase RD08_RS08610 IPR001057 Glutamate/acetylglutamate kinase RD08_RS08610 IPR001341 Aspartate kinase domain RD08_RS08610 IPR002912 ACT domain RD08_RS08610 IPR005260 Aspartate kinase, monofunctional class RD08_RS08610 IPR018042 Aspartate kinase, conserved site RD08_RS08610 IPR027795 GATS-like ACT domain RD08_RS08620 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS08620 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS08625 IPR011051 RmlC-like cupin domain RD08_RS08625 IPR013096 Cupin 2, conserved barrel RD08_RS08625 IPR014710 RmlC-like jelly roll fold RD08_RS08630 IPR011008 Dimeric alpha-beta barrel RD08_RS08630 IPR012577 NIPSNAP RD08_RS08635 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD08_RS08635 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD08_RS08635 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD08_RS08635 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS08635 IPR013328 Dehydrogenase, multihelical RD08_RS08635 IPR016040 NAD(P)-binding domain RD08_RS08640 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS08645 IPR004681 TRAP transporter permease protein RD08_RS08645 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS08650 IPR004682 TRAP dicarboxylate transporter RD08_RS08650 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS08655 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS08655 IPR029058 Alpha/Beta hydrolase fold RD08_RS08660 IPR002811 Aspartate dehydrogenase RD08_RS08660 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD08_RS08660 IPR011182 L-aspartate dehydrogenase RD08_RS08660 IPR016040 NAD(P)-binding domain RD08_RS08660 IPR020626 L-aspartate dehydrogenase, prokaryotic RD08_RS08665 IPR002347 Glucose/ribitol dehydrogenase RD08_RS08665 IPR016040 NAD(P)-binding domain RD08_RS08665 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS08670 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS08670 IPR009057 Homeodomain-like RD08_RS08670 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS08670 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS08675 IPR000847 Transcription regulator HTH, LysR RD08_RS08675 IPR005119 LysR, substrate-binding RD08_RS08675 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08685 IPR011059 Metal-dependent hydrolase, composite domain RD08_RS08685 IPR013108 Amidohydrolase 3 RD08_RS08685 IPR032466 RD08_RS08685 RD08_RS08690 IPR011059 Metal-dependent hydrolase, composite domain RD08_RS08690 IPR013108 Amidohydrolase 3 RD08_RS08695 IPR000515 MetI-like domain RD08_RS08700 IPR000515 MetI-like domain RD08_RS08705 IPR003439 ABC transporter-like RD08_RS08705 IPR003593 AAA+ ATPase domain RD08_RS08705 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS08705 IPR013611 Transport-associated OB, type 2 RD08_RS08705 IPR017871 ABC transporter, conserved site RD08_RS08705 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08715 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD08_RS08715 IPR013785 Aldolase-type TIM barrel RD08_RS08720 IPR005471 Transcription regulator IclR, N-terminal RD08_RS08720 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08720 IPR014757 Transcription regulator IclR, C-terminal RD08_RS08720 IPR029016 GAF domain-like RD08_RS08725 IPR003781 CoA-binding RD08_RS08725 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS08725 IPR016040 NAD(P)-binding domain RD08_RS08725 IPR016102 Succinyl-CoA synthetase-like RD08_RS08725 IPR032875 RD08_RS08725 RD08_RS08730 IPR005064 Bordetella uptake gene RD08_RS08735 IPR006175 YjgF/Yer057p/UK114 family RD08_RS08735 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS08740 IPR002539 MaoC-like domain RD08_RS08740 IPR029069 HotDog domain RD08_RS08745 IPR002539 MaoC-like domain RD08_RS08745 IPR029069 HotDog domain RD08_RS08750 IPR029069 HotDog domain RD08_RS08755 IPR001845 HTH ArsR-type DNA-binding domain RD08_RS08755 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08760 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD08_RS08760 IPR013785 Aldolase-type TIM barrel RD08_RS08770 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA RD08_RS08770 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS08775 IPR002509 Polysaccharide deacetylase RD08_RS08775 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD08_RS08775 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB RD08_RS08775 IPR032772 RD08_RS08775 RD08_RS08780 IPR011990 Tetratricopeptide-like helical domain RD08_RS08780 IPR019734 Tetratricopeptide repeat RD08_RS08780 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA RD08_RS08795 IPR000835 MarR-type HTH domain RD08_RS08795 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08800 IPR001584 Integrase, catalytic core RD08_RS08800 IPR009057 Homeodomain-like RD08_RS08800 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08800 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08800 IPR012337 Ribonuclease H-like domain RD08_RS08800 IPR024967 DNA-binding domain, IS481-type RD08_RS08805 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS08805 IPR011006 CheY-like superfamily RD08_RS08805 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08805 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS08810 IPR005841 Alpha-D-phosphohexomutase superfamily RD08_RS08810 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD08_RS08810 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD08_RS08810 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD08_RS08810 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD08_RS08810 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD08_RS08815 IPR001672 Phosphoglucose isomerase (PGI) RD08_RS08820 IPR001451 Bacterial transferase hexapeptide repeat RD08_RS08820 IPR011004 Trimeric LpxA-like RD08_RS08825 IPR011701 Major facilitator superfamily RD08_RS08825 IPR020846 Major facilitator superfamily domain RD08_RS08830 IPR003000 Sirtuin family RD08_RS08830 IPR026587 Sirtuin, class II RD08_RS08830 IPR026591 Sirtuin family, catalytic core small domain RD08_RS08830 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS08835 IPR000760 Inositol monophosphatase RD08_RS08840 IPR010102 Succinate semialdehyde dehydrogenase RD08_RS08840 IPR015590 Aldehyde dehydrogenase domain RD08_RS08840 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS08840 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS08840 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS08840 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS08840 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD08_RS08845 IPR004632 4-aminobutyrate aminotransferase, bacterial RD08_RS08845 IPR005814 Aminotransferase class-III RD08_RS08845 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS08845 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS08845 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS08850 IPR000524 Transcription regulator HTH, GntR RD08_RS08850 IPR004839 Aminotransferase, class I/classII RD08_RS08850 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08850 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS08850 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS08850 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS08855 IPR002763 Protein of unknown function DUF72 RD08_RS08860 IPR000212 DNA helicase, UvrD/REP type RD08_RS08860 IPR014016 UvrD-like Helicase, ATP-binding domain RD08_RS08860 IPR014017 DNA helicase, UvrD-like, C-terminal RD08_RS08860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08865 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RD08_RS08870 IPR002071 Thermonuclease active site RD08_RS08870 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RD08_RS08875 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS08880 IPR000515 MetI-like domain RD08_RS08885 IPR000515 MetI-like domain RD08_RS08890 IPR003439 ABC transporter-like RD08_RS08890 IPR003593 AAA+ ATPase domain RD08_RS08890 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS08890 IPR017871 ABC transporter, conserved site RD08_RS08890 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08895 IPR000835 MarR-type HTH domain RD08_RS08895 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS08900 IPR001584 Integrase, catalytic core RD08_RS08900 IPR009057 Homeodomain-like RD08_RS08900 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS08900 IPR012337 Ribonuclease H-like domain RD08_RS08900 IPR024967 DNA-binding domain, IS481-type RD08_RS08910 IPR013686 Polypeptide-transport-associated, ShlB-type RD08_RS08915 IPR005330 MHYT RD08_RS08920 IPR007047 Flp/Fap pilin component RD08_RS08925 IPR000045 Prepilin type IV endopeptidase, peptidase domain RD08_RS08930 IPR012495 TadE-like RD08_RS08935 IPR012495 TadE-like RD08_RS08940 IPR013974 SAF domain RD08_RS08940 IPR017592 Pilus assembly, Flp-type CpaB RD08_RS08940 IPR031571 RD08_RS08940 RD08_RS08945 IPR001775 GspD/PilQ family RD08_RS08945 IPR004846 Type II/III secretion system RD08_RS08945 IPR032789 RD08_RS08945 RD08_RS08950 IPR011006 CheY-like superfamily RD08_RS08950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08955 IPR001482 Type II secretion system protein E RD08_RS08955 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08960 IPR018076 Type II secretion system F domain RD08_RS08965 IPR018076 Type II secretion system F domain RD08_RS08970 IPR011990 Tetratricopeptide-like helical domain RD08_RS08970 IPR016931 Uncharacterised conserved protein UCP029658, TPR RD08_RS08970 IPR019734 Tetratricopeptide repeat RD08_RS08980 IPR018705 Domain of unknown function DUF2134, membrane RD08_RS08985 IPR002078 RNA polymerase sigma factor 54 interaction domain RD08_RS08985 IPR002197 DNA binding HTH domain, Fis-type RD08_RS08985 IPR003593 AAA+ ATPase domain RD08_RS08985 IPR009057 Homeodomain-like RD08_RS08985 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD08_RS08985 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD08_RS08985 IPR025944 Sigma-54 interaction domain, conserved site RD08_RS08985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS08990 IPR021350 Protein of unknown function DUF2968 RD08_RS08995 IPR009562 Protein of unknown function DUF1178 RD08_RS09000 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS09000 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09000 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD08_RS09000 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS09000 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS09000 IPR014284 RNA polymerase sigma-70 like domain RD08_RS09005 IPR009078 Ferritin-like superfamily RD08_RS09005 IPR012347 Ferritin-related RD08_RS09010 IPR002327 Cytochrome c, class IA/ IB RD08_RS09010 IPR009056 Cytochrome c-like domain RD08_RS09015 IPR001059 Translation elongation factor P/YeiP, central RD08_RS09015 IPR008991 Translation protein SH3-like domain RD08_RS09015 IPR011768 Translation elongation factor P RD08_RS09015 IPR012340 Nucleic acid-binding, OB-fold RD08_RS09015 IPR013185 Translation elongation factor, KOW-like RD08_RS09015 IPR013852 Translation elongation factor P/YeiP, conserved site RD08_RS09015 IPR014722 Ribosomal protein L2 domain 2 RD08_RS09015 IPR015365 Elongation factor P, C-terminal RD08_RS09015 IPR020599 Translation elongation factor P/YeiP RD08_RS09020 IPR016633 Uncharacterised conserved protein UCP015557 RD08_RS09025 IPR021292 Protein of unknown function DUF2863 RD08_RS09030 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RD08_RS09030 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type RD08_RS09035 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD08_RS09035 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD08_RS09035 IPR006249 Aconitate/iron regulatory protein 2 RD08_RS09035 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS09035 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD08_RS09035 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD08_RS09035 IPR015937 Aconitase/isopropylmalate dehydratase RD08_RS09035 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD08_RS09040 IPR023346 Lysozyme-like domain RD08_RS09045 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS09045 IPR010105 TonB-dependent siderophore receptor RD08_RS09045 IPR010917 TonB-dependent receptor, conserved site RD08_RS09045 IPR012910 TonB-dependent receptor, plug RD08_RS09045 IPR030149 RD08_RS09045 RD08_RS09050 IPR006328 Haloacid dehalogenase, type II RD08_RS09050 IPR006439 HAD hydrolase, subfamily IA RD08_RS09050 IPR023214 HAD-like domain RD08_RS09055 IPR001584 Integrase, catalytic core RD08_RS09055 IPR009057 Homeodomain-like RD08_RS09055 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09055 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09055 IPR012337 Ribonuclease H-like domain RD08_RS09055 IPR024967 DNA-binding domain, IS481-type RD08_RS09060 IPR006664 Outer membrane protein, bacterial RD08_RS09060 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD08_RS09070 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD08_RS09070 IPR004406 Aconitase B, bacterial RD08_RS09070 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS09070 IPR015929 Aconitase B, N-terminal, bacterial RD08_RS09070 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD08_RS09070 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD08_RS09070 IPR015933 Aconitase B, HEAT-like, bacterial RD08_RS09070 IPR015937 Aconitase/isopropylmalate dehydratase RD08_RS09070 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD08_RS09075 IPR012337 Ribonuclease H-like domain RD08_RS09075 IPR013520 Exonuclease, RNase T/DNA polymerase III RD08_RS09080 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 RD08_RS09080 IPR025984 MazG-like domain RD08_RS09085 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD08_RS09085 IPR011008 Dimeric alpha-beta barrel RD08_RS09090 IPR005545 YCII-related RD08_RS09090 IPR011008 Dimeric alpha-beta barrel RD08_RS09095 IPR000620 Drug/metabolite transporter RD08_RS09100 IPR002781 Transmembrane protein TauE like RD08_RS09110 IPR001584 Integrase, catalytic core RD08_RS09110 IPR009057 Homeodomain-like RD08_RS09110 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09110 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09110 IPR012337 Ribonuclease H-like domain RD08_RS09110 IPR024967 DNA-binding domain, IS481-type RD08_RS09115 IPR000847 Transcription regulator HTH, LysR RD08_RS09115 IPR005119 LysR, substrate-binding RD08_RS09115 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09120 IPR003702 Acetyl-CoA hydrolase/transferase RD08_RS09120 IPR017821 Succinate CoA transferase RD08_RS09120 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RD08_RS09130 IPR000847 Transcription regulator HTH, LysR RD08_RS09130 IPR005119 LysR, substrate-binding RD08_RS09130 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09165 IPR003991 Pertactin virulence factor family RD08_RS09165 IPR004899 Pertactin, central region RD08_RS09165 IPR005546 Autotransporter beta-domain RD08_RS09165 IPR006315 Outer membrane autotransporter barrel RD08_RS09165 IPR011050 Pectin lyase fold/virulence factor RD08_RS09165 IPR012332 P22 tailspike C-terminal domain-like RD08_RS09170 IPR003697 Maf-like protein RD08_RS09170 IPR029001 Inosine triphosphate pyrophosphatase-like RD08_RS09175 IPR003742 SPOUT methyltransferase, predicted RD08_RS09175 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD08_RS09175 IPR029028 Alpha/beta knot methyltransferases RD08_RS09180 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RD08_RS09185 IPR004821 Cytidyltransferase-like domain RD08_RS09185 IPR005248 Probable nicotinate-nucleotide adenylyltransferase RD08_RS09185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS09190 IPR001260 Coproporphyrinogen III oxidase, aerobic RD08_RS09190 IPR018375 Coproporphyrinogen III oxidase, conserved site RD08_RS09195 IPR000115 Phosphoribosylglycinamide synthetase RD08_RS09195 IPR011054 Rudiment single hybrid motif RD08_RS09195 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS09195 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS09195 IPR016185 Pre-ATP-grasp domain RD08_RS09195 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RD08_RS09195 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD08_RS09195 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RD08_RS09200 IPR002876 Transcriptional regulator TACO1-like RD08_RS09200 IPR017856 Integrase, N-terminal zinc-binding domain-like RD08_RS09200 IPR026563 Transcriptional regulator TACO1-like, domain 2 RD08_RS09200 IPR026564 Transcriptional regulator TACO1-like, domain 3 RD08_RS09200 IPR029072 YebC-like RD08_RS09205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS09205 IPR033186 RD08_RS09205 RD08_RS09210 IPR001463 Sodium:alanine symporter RD08_RS09215 IPR005814 Aminotransferase class-III RD08_RS09215 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS09215 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS09215 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS09220 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD08_RS09220 IPR016040 NAD(P)-binding domain RD08_RS09225 IPR015590 Aldehyde dehydrogenase domain RD08_RS09225 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS09225 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS09225 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS09225 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS09225 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD08_RS09230 IPR000620 Drug/metabolite transporter RD08_RS09235 IPR002933 Peptidase M20 RD08_RS09235 IPR010158 Amidase, hydantoinase/carbamoylase RD08_RS09235 IPR011650 Peptidase M20, dimerisation domain RD08_RS09240 IPR000286 Histone deacetylase superfamily RD08_RS09240 IPR023801 Histone deacetylase domain RD08_RS09245 IPR011051 RmlC-like cupin domain RD08_RS09245 IPR013096 Cupin 2, conserved barrel RD08_RS09245 IPR014710 RmlC-like jelly roll fold RD08_RS09250 IPR004632 4-aminobutyrate aminotransferase, bacterial RD08_RS09250 IPR005814 Aminotransferase class-III RD08_RS09250 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS09250 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS09250 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS09255 IPR001584 Integrase, catalytic core RD08_RS09255 IPR009057 Homeodomain-like RD08_RS09255 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09255 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09255 IPR012337 Ribonuclease H-like domain RD08_RS09255 IPR024967 DNA-binding domain, IS481-type RD08_RS09260 IPR003439 ABC transporter-like RD08_RS09260 IPR003593 AAA+ ATPase domain RD08_RS09260 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS09260 IPR017871 ABC transporter, conserved site RD08_RS09260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS09265 IPR000515 MetI-like domain RD08_RS09265 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD08_RS09270 IPR000515 MetI-like domain RD08_RS09275 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS09275 IPR030678 RD08_RS09275 RD08_RS09280 IPR000524 Transcription regulator HTH, GntR RD08_RS09280 IPR004839 Aminotransferase, class I/classII RD08_RS09280 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09280 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS09280 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS09285 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD08_RS09285 IPR011829 Tartrate dehydrogenase RD08_RS09285 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD08_RS09285 IPR024084 Isopropylmalate dehydrogenase-like domain RD08_RS09290 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD08_RS09290 IPR011701 Major facilitator superfamily RD08_RS09290 IPR020846 Major facilitator superfamily domain RD08_RS09305 IPR000835 MarR-type HTH domain RD08_RS09305 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09305 IPR023187 Transcriptional regulator MarR-type, conserved site RD08_RS09310 IPR000620 Drug/metabolite transporter RD08_RS09315 IPR000620 Drug/metabolite transporter RD08_RS09320 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS09320 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD08_RS09320 IPR011032 GroES (chaperonin 10)-like RD08_RS09320 IPR013149 Alcohol dehydrogenase, C-terminal RD08_RS09320 IPR013154 Alcohol dehydrogenase GroES-like RD08_RS09320 IPR016040 NAD(P)-binding domain RD08_RS09320 IPR020843 Polyketide synthase, enoylreductase RD08_RS09325 IPR001915 Peptidase M48 RD08_RS09325 IPR022919 Peptidase M48, protease HtpX, putative RD08_RS09335 IPR001763 Rhodanese-like domain RD08_RS09340 IPR017670 Phosphonate degradation operon associated HDIG domain protein RD08_RS09345 IPR000847 Transcription regulator HTH, LysR RD08_RS09345 IPR005119 LysR, substrate-binding RD08_RS09345 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09345 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type RD08_RS09350 IPR003439 ABC transporter-like RD08_RS09350 IPR003593 AAA+ ATPase domain RD08_RS09350 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS09350 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 RD08_RS09350 IPR017871 ABC transporter, conserved site RD08_RS09350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS09355 IPR000515 MetI-like domain RD08_RS09355 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative RD08_RS09360 IPR006323 Phosphonoacetaldehyde hydrolase RD08_RS09360 IPR006439 HAD hydrolase, subfamily IA RD08_RS09360 IPR023198 Phosphoglycolate phosphatase, domain 2 RD08_RS09360 IPR023214 HAD-like domain RD08_RS09365 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative RD08_RS09365 IPR026045 Ferric binding protein RD08_RS09370 IPR006076 FAD dependent oxidoreductase RD08_RS09370 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS09375 IPR001584 Integrase, catalytic core RD08_RS09375 IPR009057 Homeodomain-like RD08_RS09375 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09375 IPR012337 Ribonuclease H-like domain RD08_RS09375 IPR024967 DNA-binding domain, IS481-type RD08_RS09390 IPR006042 Xanthine/uracil permease RD08_RS09390 IPR006043 Xanthine/uracil/vitamin C permease RD08_RS09395 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD08_RS09395 IPR003660 HAMP linker domain RD08_RS09395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD08_RS09395 IPR004090 Chemotaxis methyl-accepting receptor RD08_RS09400 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RD08_RS09400 IPR006359 Transcription elongation factor GreA RD08_RS09400 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RD08_RS09400 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RD08_RS09400 IPR023459 Transcription elongation factor GreA/GreB family RD08_RS09400 IPR028624 Transcription elongation factor GreA/GreB RD08_RS09405 IPR001584 Integrase, catalytic core RD08_RS09405 IPR009057 Homeodomain-like RD08_RS09405 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09405 IPR012337 Ribonuclease H-like domain RD08_RS09405 IPR024967 DNA-binding domain, IS481-type RD08_RS09410 IPR010261 Tir chaperone protein (CesT) family RD08_RS09415 IPR021123 Type III secretion, needle-protein-like RD08_RS09425 IPR012843 Type III secretion system YscD/HrpQ RD08_RS09430 IPR001712 Type III secretion system FHIPEP RD08_RS09430 IPR006302 Type III secretion protein HrcV RD08_RS09430 IPR025505 FHIPEP conserved site RD08_RS09435 IPR011990 Tetratricopeptide-like helical domain RD08_RS09440 IPR012672 Type III secretion system YscX RD08_RS09445 IPR012673 Type III secretion system chaperone SycN RD08_RS09450 IPR010812 Hypersensitivity response secretion-like, HrpJ RD08_RS09450 IPR013351 Type III secretion system effector delivery regulator TyeA-related RD08_RS09450 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC RD08_RS09450 IPR015144 Type III secretion system effector delivery regulator TyeA RD08_RS09465 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD RD08_RS09465 IPR011990 Tetratricopeptide-like helical domain RD08_RS09465 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup RD08_RS09475 IPR006972 Secretion system effector C, SseC-like RD08_RS09480 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD RD08_RS09480 IPR011990 Tetratricopeptide-like helical domain RD08_RS09485 IPR011990 Tetratricopeptide-like helical domain RD08_RS09490 IPR012670 Type III secretion system, YscI/HrpB RD08_RS09495 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ RD08_RS09495 IPR006182 Secretory protein YscJ/FliF RD08_RS09500 IPR009510 Type III secretion system, secretion protein K RD08_RS09505 IPR010586 Nodulation NolV RD08_RS09505 IPR012842 Type III secretion system HrpE/YscL RD08_RS09505 IPR028987 F-type ATP synthase subunit B-like, membrane domain RD08_RS09510 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD08_RS09510 IPR003593 AAA+ ATPase domain RD08_RS09510 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD08_RS09510 IPR005714 ATPase, type III secretion system, FliI/YscN RD08_RS09510 IPR013380 ATPase, type III secretion system, H+-transporting RD08_RS09510 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD08_RS09510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS09515 IPR009929 Type III secretion sytem,YscO RD08_RS09525 IPR001543 Surface presentation of antigen (SpoA) RD08_RS09525 IPR003283 Type III secretion system outer membrane, SpaO RD08_RS09525 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO RD08_RS09530 IPR005773 Yop virulence translocation protein R RD08_RS09530 IPR005838 Type III secretion system inner membrane P protein RD08_RS09535 IPR002191 Bacterial export protein family 3 RD08_RS09535 IPR006306 Type III secretion protein HrpO RD08_RS09540 IPR002010 Type III secretion system inner membrane R protein RD08_RS09540 IPR006304 Type III secretion protein SpaR/YscT RD08_RS09545 IPR006135 Type III secretion system substrate exporter RD08_RS09545 IPR006307 Type III exporter system, secretion apparatus protein BsaZ RD08_RS09545 IPR029025 Type III secretion system substrate exporter, C-terminal RD08_RS09550 IPR010261 Tir chaperone protein (CesT) family RD08_RS09555 IPR003522 Type III secretion system outer membrane pore YscC/HrcC RD08_RS09555 IPR004846 Type II/III secretion system RD08_RS09555 IPR005644 NolW-like RD08_RS09560 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS09560 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09560 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD08_RS09560 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS09560 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS09560 IPR014284 RNA polymerase sigma-70 like domain RD08_RS09580 IPR007487 ABC transporter, substrate-binding protein RD08_RS09585 IPR001932 Protein phosphatase 2C (PP2C)-like domain RD08_RS09585 IPR003660 HAMP linker domain RD08_RS09585 IPR004010 Cache domain RD08_RS09585 IPR033480 RD08_RS09585 RD08_RS09590 IPR011701 Major facilitator superfamily RD08_RS09590 IPR020846 Major facilitator superfamily domain RD08_RS09595 IPR000821 Alanine racemase RD08_RS09595 IPR001608 Alanine racemase, N-terminal RD08_RS09595 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD08_RS09595 IPR011079 Alanine racemase, C-terminal RD08_RS09595 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RD08_RS09595 IPR029066 PLP-binding barrel RD08_RS09600 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS09605 IPR002645 STAS domain RD08_RS09605 IPR003658 Anti-sigma factor antagonist RD08_RS09610 IPR001736 Phospholipase D/Transphosphatidylase RD08_RS09610 IPR025202 Phospholipase D-like domain RD08_RS09610 IPR027379 Cardiolipin synthase N-terminal RD08_RS09620 IPR004899 Pertactin, central region RD08_RS09620 IPR005546 Autotransporter beta-domain RD08_RS09620 IPR006315 Outer membrane autotransporter barrel RD08_RS09620 IPR011050 Pectin lyase fold/virulence factor RD08_RS09620 IPR012332 P22 tailspike C-terminal domain-like RD08_RS09620 IPR013425 Autotransporter-associated beta strand repeat RD08_RS09620 IPR030895 RD08_RS09620 RD08_RS09630 IPR001584 Integrase, catalytic core RD08_RS09630 IPR009057 Homeodomain-like RD08_RS09630 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09630 IPR012337 Ribonuclease H-like domain RD08_RS09630 IPR024967 DNA-binding domain, IS481-type RD08_RS09635 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS09635 IPR011853 TRAP transporter, 4TM/12TM fusion protein RD08_RS09635 IPR021814 Protein of unknown function DUF3394 RD08_RS09640 IPR011852 TRAP transporter solute receptor, TAXI family RD08_RS09645 IPR005814 Aminotransferase class-III RD08_RS09645 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS09645 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS09645 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS09650 IPR000281 Helix-turn-helix protein RpiR RD08_RS09650 IPR001347 Sugar isomerase (SIS) RD08_RS09650 IPR009057 Homeodomain-like RD08_RS09650 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09655 IPR000835 MarR-type HTH domain RD08_RS09655 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09655 IPR023187 Transcriptional regulator MarR-type, conserved site RD08_RS09660 IPR000182 GNAT domain RD08_RS09660 IPR012772 L-2,4-diaminobutyric acid acetyltransferase RD08_RS09660 IPR016181 Acyl-CoA N-acyltransferase RD08_RS09665 IPR001584 Integrase, catalytic core RD08_RS09665 IPR009057 Homeodomain-like RD08_RS09665 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09665 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09665 IPR012337 Ribonuclease H-like domain RD08_RS09665 IPR024967 DNA-binding domain, IS481-type RD08_RS09670 IPR000640 Translation elongation factor EFG, V domain RD08_RS09670 IPR001498 Impact, N-terminal RD08_RS09670 IPR009022 Elongation factor G, III-V domain RD08_RS09670 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RD08_RS09670 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS09670 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RD08_RS09670 IPR023582 Impact family RD08_RS09675 IPR005746 Thioredoxin RD08_RS09675 IPR012336 Thioredoxin-like fold RD08_RS09675 IPR013766 Thioredoxin domain RD08_RS09675 IPR017937 Thioredoxin, conserved site RD08_RS09685 IPR006043 Xanthine/uracil/vitamin C permease RD08_RS09685 IPR026033 Purine permease PbuG-like RD08_RS09685 IPR029940 RD08_RS09685 RD08_RS09690 IPR000905 Gcp-like domain RD08_RS09690 IPR017861 Kae1/YgjD family RD08_RS09690 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RD08_RS09695 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS09695 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS09700 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY RD08_RS09705 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RD08_RS09705 IPR030048 RD08_RS09705 RD08_RS09710 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RD08_RS09710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS09715 IPR011055 Duplicated hybrid motif RD08_RS09715 IPR016047 Peptidase M23 RD08_RS09715 IPR018392 LysM domain RD08_RS09720 IPR012337 Ribonuclease H-like domain RD08_RS09720 IPR019288 Predicted 3'-5' exonuclease, PolB-like RD08_RS09730 IPR010239 Conserved hypothetical protein CHP02001 RD08_RS09735 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD RD08_RS09735 IPR010280 (Uracil-5)-methyltransferase family RD08_RS09735 IPR012340 Nucleic acid-binding, OB-fold RD08_RS09735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS09735 IPR030390 RD08_RS09735 RD08_RS09735 IPR030391 RD08_RS09735 RD08_RS09740 IPR000551 MerR-type HTH domain RD08_RS09740 IPR009061 DNA binding domain, putative RD08_RS09740 IPR011789 Cu(I)-responsive transcriptional regulator RD08_RS09740 IPR015358 Transcription regulator MerR, DNA binding RD08_RS09745 IPR006121 Heavy metal-associated domain, HMA RD08_RS09745 IPR017969 Heavy-metal-associated, conserved site RD08_RS09750 IPR002109 Glutaredoxin RD08_RS09750 IPR011767 Glutaredoxin active site RD08_RS09750 IPR011906 Glutaredoxin domain RD08_RS09750 IPR012336 Thioredoxin-like fold RD08_RS09750 IPR013740 Redoxin RD08_RS09750 IPR014025 Glutaredoxin subgroup RD08_RS09755 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD08_RS09755 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD08_RS09755 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS09760 IPR007473 Ribosomal RNA large subunit methyltransferase J RD08_RS09760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS09765 IPR004129 Glycerophosphoryl diester phosphodiesterase RD08_RS09765 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain RD08_RS09765 IPR030395 RD08_RS09765 RD08_RS09770 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD08_RS09770 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RD08_RS09770 IPR027304 Trigger factor/SurA domain RD08_RS09775 IPR013830 RD08_RS09775 RD08_RS09780 IPR003439 ABC transporter-like RD08_RS09780 IPR017871 ABC transporter, conserved site RD08_RS09780 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS09785 IPR001584 Integrase, catalytic core RD08_RS09785 IPR009057 Homeodomain-like RD08_RS09785 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09785 IPR012337 Ribonuclease H-like domain RD08_RS09785 IPR024967 DNA-binding domain, IS481-type RD08_RS09790 IPR001584 Integrase, catalytic core RD08_RS09790 IPR009057 Homeodomain-like RD08_RS09790 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09790 IPR012337 Ribonuclease H-like domain RD08_RS09790 IPR024967 DNA-binding domain, IS481-type RD08_RS09795 IPR001584 Integrase, catalytic core RD08_RS09795 IPR009057 Homeodomain-like RD08_RS09795 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09795 IPR012337 Ribonuclease H-like domain RD08_RS09795 IPR024967 DNA-binding domain, IS481-type RD08_RS09800 IPR007055 BON domain RD08_RS09800 IPR014004 Transport-associated and nodulation domain, bacteria RD08_RS09805 IPR009760 Protein of unknown function DUF1328 RD08_RS09810 IPR008462 CsbD-like RD08_RS09810 IPR026042 Stress response protein YjbJ RD08_RS09815 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD08_RS09815 IPR004101 Mur ligase, C-terminal RD08_RS09815 IPR011810 Cyanophycin synthetase RD08_RS09815 IPR013221 Mur ligase, central RD08_RS09815 IPR013651 ATP-grasp fold, RimK-type RD08_RS09815 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS09815 IPR018109 Folylpolyglutamate synthetase, conserved site RD08_RS09820 IPR004101 Mur ligase, C-terminal RD08_RS09820 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD08_RS09820 IPR011810 Cyanophycin synthetase RD08_RS09820 IPR013221 Mur ligase, central RD08_RS09820 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS09830 IPR015005 Domain of unknown function DUF1854 RD08_RS09835 IPR007434 Protein of unknown function DUF482 RD08_RS09835 IPR016181 Acyl-CoA N-acyltransferase RD08_RS09840 IPR007402 Protein of unknown function DUF455 RD08_RS09840 IPR009078 Ferritin-like superfamily RD08_RS09840 IPR011197 Uncharacterised conserved protein UCP012318 RD08_RS09845 IPR002477 Peptidoglycan binding-like RD08_RS09845 IPR011757 Lytic transglycosylase MltB RD08_RS09845 IPR011970 Lytic murein transglycosylase RD08_RS09845 IPR023346 Lysozyme-like domain RD08_RS09845 IPR031304 RD08_RS09845 RD08_RS09850 IPR009282 Protein of unknown function DUF937 RD08_RS09850 IPR027405 YidB-like RD08_RS09855 IPR001584 Integrase, catalytic core RD08_RS09855 IPR009057 Homeodomain-like RD08_RS09855 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09855 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09855 IPR012337 Ribonuclease H-like domain RD08_RS09855 IPR024967 DNA-binding domain, IS481-type RD08_RS09860 IPR000485 AsnC-type HTH domain RD08_RS09860 IPR011008 Dimeric alpha-beta barrel RD08_RS09860 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09860 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS09860 IPR019888 Transcription regulator AsnC-type RD08_RS09870 IPR003382 Flavoprotein RD08_RS09870 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RD08_RS09870 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RD08_RS09875 IPR001872 Peptidase A8, signal peptidase II RD08_RS09880 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD08_RS09880 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD08_RS09880 IPR002301 Isoleucine-tRNA ligase RD08_RS09880 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD08_RS09880 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD08_RS09880 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RD08_RS09880 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD08_RS09880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS09880 IPR023585 Isoleucine-tRNA ligase, type 1 RD08_RS09885 IPR002606 Riboflavin kinase, bacterial RD08_RS09885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS09885 IPR015864 FAD synthetase RD08_RS09885 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RD08_RS09885 IPR023465 Riboflavin kinase domain RD08_RS09885 IPR023468 Riboflavin kinase RD08_RS09890 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RD08_RS09890 IPR023267 RNA (C5-cytosine) methyltransferase RD08_RS09890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS09895 IPR001584 Integrase, catalytic core RD08_RS09895 IPR009057 Homeodomain-like RD08_RS09895 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS09895 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS09895 IPR012337 Ribonuclease H-like domain RD08_RS09895 IPR024967 DNA-binding domain, IS481-type RD08_RS09905 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 RD08_RS09905 IPR005804 Fatty acid desaturase, type 1 RD08_RS09910 IPR000212 DNA helicase, UvrD/REP type RD08_RS09910 IPR013986 DExx box DNA helicase domain RD08_RS09910 IPR014016 UvrD-like Helicase, ATP-binding domain RD08_RS09910 IPR014017 DNA helicase, UvrD-like, C-terminal RD08_RS09910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS09915 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS09915 IPR011662 Secretin/TonB, short N-terminal RD08_RS09915 IPR012910 TonB-dependent receptor, plug RD08_RS09920 IPR003439 ABC transporter-like RD08_RS09920 IPR003593 AAA+ ATPase domain RD08_RS09920 IPR017871 ABC transporter, conserved site RD08_RS09920 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS09920 IPR032781 RD08_RS09920 RD08_RS09925 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD08_RS09925 IPR004556 Modification methylase HemK RD08_RS09925 IPR007848 Methyltransferase small domain RD08_RS09925 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase RD08_RS09925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS09930 IPR002933 Peptidase M20 RD08_RS09930 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RD08_RS09930 IPR011650 Peptidase M20, dimerisation domain RD08_RS09935 IPR001451 Bacterial transferase hexapeptide repeat RD08_RS09935 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RD08_RS09935 IPR011004 Trimeric LpxA-like RD08_RS09935 IPR018357 Hexapeptide transferase, conserved site RD08_RS09935 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RD08_RS09950 IPR025421 Protein of unknown function DUF4148 RD08_RS09955 IPR003991 Pertactin virulence factor family RD08_RS09955 IPR005546 Autotransporter beta-domain RD08_RS09955 IPR006315 Outer membrane autotransporter barrel RD08_RS09970 IPR002059 Cold-shock protein, DNA-binding RD08_RS09970 IPR011129 Cold shock protein RD08_RS09970 IPR012156 Cold shock, CspA RD08_RS09970 IPR012340 Nucleic acid-binding, OB-fold RD08_RS09970 IPR019844 Cold-shock conserved site RD08_RS09975 IPR010323 Protein of unknown function DUF924 RD08_RS09975 IPR011990 Tetratricopeptide-like helical domain RD08_RS09980 IPR002059 Cold-shock protein, DNA-binding RD08_RS09980 IPR011129 Cold shock protein RD08_RS09980 IPR012156 Cold shock, CspA RD08_RS09980 IPR012340 Nucleic acid-binding, OB-fold RD08_RS09980 IPR019844 Cold-shock conserved site RD08_RS09985 IPR005134 Uncharacterised protein family UPF0114 RD08_RS09985 IPR020761 Uncharacterised protein family UPF0114, bacteria RD08_RS09985 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria RD08_RS09990 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RD08_RS09990 IPR005215 Trigger factor RD08_RS09990 IPR008880 Trigger factor, C-terminal domain RD08_RS09990 IPR008881 Trigger factor, ribosome-binding, bacterial RD08_RS09990 IPR027304 Trigger factor/SurA domain RD08_RS09995 IPR001907 ATP-dependent Clp protease proteolytic subunit RD08_RS09995 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RD08_RS09995 IPR029045 ClpP/crotonase-like domain RD08_RS09995 IPR033135 RD08_RS09995 RD08_RS10000 IPR003593 AAA+ ATPase domain RD08_RS10000 IPR003959 ATPase, AAA-type, core RD08_RS10000 IPR004487 Clp protease, ATP-binding subunit ClpX RD08_RS10000 IPR010603 Zinc finger, ClpX C4-type RD08_RS10000 IPR019489 Clp ATPase, C-terminal RD08_RS10000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10005 IPR003111 Peptidase S16, lon N-terminal RD08_RS10005 IPR003593 AAA+ ATPase domain RD08_RS10005 IPR003959 ATPase, AAA-type, core RD08_RS10005 IPR004815 Lon protease, bacterial/eukaryotic-type RD08_RS10005 IPR008268 Peptidase S16, active site RD08_RS10005 IPR008269 Peptidase S16, Lon C-terminal RD08_RS10005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS10005 IPR015947 PUA-like domain RD08_RS10005 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS10005 IPR027065 Lon protease RD08_RS10005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10005 IPR027543 Lon protease, bacterial RD08_RS10010 IPR000847 Transcription regulator HTH, LysR RD08_RS10010 IPR005119 LysR, substrate-binding RD08_RS10010 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10015 IPR003673 CoA-transferase family III RD08_RS10015 IPR023606 CoA-transferase family III domain RD08_RS10020 IPR005064 Bordetella uptake gene RD08_RS10025 IPR002539 MaoC-like domain RD08_RS10025 IPR029069 HotDog domain RD08_RS10030 IPR001753 Crotonase superfamily RD08_RS10030 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS10030 IPR029045 ClpP/crotonase-like domain RD08_RS10035 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD08_RS10035 IPR012340 Nucleic acid-binding, OB-fold RD08_RS10035 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD08_RS10040 IPR002155 Thiolase RD08_RS10040 IPR016039 Thiolase-like RD08_RS10040 IPR020617 Thiolase, C-terminal RD08_RS10045 IPR002347 Glucose/ribitol dehydrogenase RD08_RS10045 IPR016040 NAD(P)-binding domain RD08_RS10045 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS10050 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS10050 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS10050 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS10050 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS10060 IPR004165 Coenzyme A transferase family I RD08_RS10060 IPR012792 3-oxoacid CoA-transferase, subunit A RD08_RS10065 IPR004164 Coenzyme A transferase active site RD08_RS10065 IPR004165 Coenzyme A transferase family I RD08_RS10065 IPR012791 3-oxoacid CoA-transferase, subunit B RD08_RS10070 IPR005064 Bordetella uptake gene RD08_RS10075 IPR005064 Bordetella uptake gene RD08_RS10080 IPR001584 Integrase, catalytic core RD08_RS10080 IPR009057 Homeodomain-like RD08_RS10080 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10080 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10080 IPR012337 Ribonuclease H-like domain RD08_RS10080 IPR024967 DNA-binding domain, IS481-type RD08_RS10090 IPR003991 Pertactin virulence factor family RD08_RS10090 IPR005546 Autotransporter beta-domain RD08_RS10090 IPR006315 Outer membrane autotransporter barrel RD08_RS10095 IPR006197 Peptidase S24, LexA-like RD08_RS10095 IPR006199 LexA repressor, DNA-binding domain RD08_RS10095 IPR006200 LexA repressor RD08_RS10095 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10095 IPR015927 Peptidase S24/S26A/S26B/S26C RD08_RS10095 IPR019759 Peptidase S24/S26A/S26B RD08_RS10095 IPR028360 Peptidase S24/S26, beta-ribbon domain RD08_RS10100 IPR000796 Aspartate/other aminotransferase RD08_RS10100 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD08_RS10100 IPR004839 Aminotransferase, class I/classII RD08_RS10100 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS10100 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS10105 IPR001650 Helicase, C-terminal RD08_RS10105 IPR001943 UVR domain RD08_RS10105 IPR004807 UvrABC system, subunit B RD08_RS10105 IPR006935 Helicase/UvrB domain RD08_RS10105 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS10105 IPR024759 UvrB, YAD/RRR-motif-containing domain RD08_RS10105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10110 IPR017867 Protein-tyrosine phosphatase, low molecular weight RD08_RS10110 IPR023485 Phosphotyrosine protein phosphatase I superfamily RD08_RS10115 IPR000944 Transcription regulator Rrf2-like RD08_RS10115 IPR010242 Transcription factor HTH, IscR RD08_RS10115 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10120 IPR000192 Aminotransferase class V domain RD08_RS10120 IPR010240 Cysteine desulfurase RD08_RS10120 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS10120 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS10120 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS10120 IPR016454 Cysteine desulfurase, NifS RD08_RS10120 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RD08_RS10125 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RD08_RS10125 IPR011339 ISC system FeS cluster assembly, IscU scaffold RD08_RS10130 IPR000361 FeS cluster biogenesis RD08_RS10130 IPR011302 ISC system FeS cluster assembly, IscA scaffold RD08_RS10130 IPR016092 FeS cluster insertion protein RD08_RS10130 IPR017870 FeS cluster insertion, C-terminal, conserved site RD08_RS10130 IPR031108 RD08_RS10130 RD08_RS10135 IPR001623 DnaJ domain RD08_RS10135 IPR004640 Co-chaperone Hsc20 RD08_RS10135 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RD08_RS10140 IPR010236 ISC system FeS cluster assembly, HscA chaperone RD08_RS10140 IPR013126 Heat shock protein 70 family RD08_RS10140 IPR018181 Heat shock protein 70, conserved site RD08_RS10140 IPR029047 Heat shock protein 70kD, peptide-binding domain RD08_RS10140 IPR029048 Heat shock protein 70kD, C-terminal domain RD08_RS10145 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS10145 IPR001055 Adrenodoxin RD08_RS10145 IPR011536 Ferredoxin, 2Fe-2S type RD08_RS10145 IPR012675 Beta-grasp domain RD08_RS10145 IPR018298 Adrenodoxin, iron-sulphur binding site RD08_RS10150 IPR007479 ISC system FeS cluster assembly, IscX RD08_RS10155 IPR011607 Methylglyoxal synthase-like domain RD08_RS10155 IPR018148 Methylglyoxal synthase, active site RD08_RS10160 IPR001584 Integrase, catalytic core RD08_RS10160 IPR009057 Homeodomain-like RD08_RS10160 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10160 IPR012337 Ribonuclease H-like domain RD08_RS10160 IPR024967 DNA-binding domain, IS481-type RD08_RS10165 IPR001753 Crotonase superfamily RD08_RS10165 IPR014748 Crontonase, C-terminal RD08_RS10165 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS10165 IPR029045 ClpP/crotonase-like domain RD08_RS10170 IPR001584 Integrase, catalytic core RD08_RS10170 IPR009057 Homeodomain-like RD08_RS10170 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10170 IPR012337 Ribonuclease H-like domain RD08_RS10170 IPR024967 DNA-binding domain, IS481-type RD08_RS10175 IPR004684 2-keto-3-deoxygluconate permease RD08_RS10180 IPR010737 Protein of unknown function, DUF1537 RD08_RS10180 IPR031475 RD08_RS10180 RD08_RS10185 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA RD08_RS10185 IPR024084 Isopropylmalate dehydrogenase-like domain RD08_RS10190 IPR000524 Transcription regulator HTH, GntR RD08_RS10190 IPR011663 UbiC transcription regulator-associated RD08_RS10190 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10190 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS10195 IPR005302 Molybdenum cofactor sulfurase, C-terminal RD08_RS10195 IPR005303 MOSC, N-terminal beta barrel RD08_RS10195 IPR011037 Pyruvate kinase-like, insert domain RD08_RS10200 IPR003190 Aspartate decarboxylase RD08_RS10200 IPR009010 Aspartate decarboxylase-like domain RD08_RS10205 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS10205 IPR001221 Phenol hydroxylase reductase RD08_RS10205 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS10205 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD08_RS10205 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS10205 IPR008333 Oxidoreductase, FAD-binding domain RD08_RS10205 IPR012675 Beta-grasp domain RD08_RS10205 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS10210 IPR006076 FAD dependent oxidoreductase RD08_RS10210 IPR016040 NAD(P)-binding domain RD08_RS10210 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS10220 IPR000847 Transcription regulator HTH, LysR RD08_RS10220 IPR005119 LysR, substrate-binding RD08_RS10220 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10225 IPR010839 Protein of unknown function DUF1446 RD08_RS10235 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS10235 IPR030678 RD08_RS10235 RD08_RS10240 IPR000515 MetI-like domain RD08_RS10245 IPR000515 MetI-like domain RD08_RS10245 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD08_RS10250 IPR003439 ABC transporter-like RD08_RS10250 IPR003593 AAA+ ATPase domain RD08_RS10250 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS10250 IPR017871 ABC transporter, conserved site RD08_RS10250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10255 IPR000120 Amidase RD08_RS10255 IPR020556 Amidase, conserved site RD08_RS10255 IPR023631 Amidase signature domain RD08_RS10270 IPR009663 Pilin accessory predicted RD08_RS10280 IPR001482 Type II secretion system protein E RD08_RS10280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10290 IPR012902 Prokaryotic N-terminal methylation site RD08_RS10290 IPR014911 Type 4 secretion system, PilS, N-terminal RD08_RS10300 IPR002318 Alanine-tRNA ligase, class IIc RD08_RS10300 IPR003156 DHHA1 domain RD08_RS10300 IPR009000 Translation protein, beta-barrel domain RD08_RS10300 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RD08_RS10300 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain RD08_RS10300 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RD08_RS10300 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RD08_RS10300 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RD08_RS10305 IPR001455 TusA-like domain RD08_RS10315 IPR000307 Ribosomal protein S16 RD08_RS10315 IPR023803 Ribosomal protein S16 domain RD08_RS10320 IPR002676 RimM protein RD08_RS10320 IPR009000 Translation protein, beta-barrel domain RD08_RS10320 IPR011033 PRC-barrel-like RD08_RS10320 IPR011961 16S rRNA processing protein RimM RD08_RS10325 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RD08_RS10325 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RD08_RS10325 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RD08_RS10325 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD08_RS10325 IPR029028 Alpha/beta knot methyltransferases RD08_RS10330 IPR000192 Aminotransferase class V domain RD08_RS10330 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS10330 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS10330 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS10330 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RD08_RS10335 IPR006175 YjgF/Yer057p/UK114 family RD08_RS10335 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS10340 IPR001584 Integrase, catalytic core RD08_RS10340 IPR009057 Homeodomain-like RD08_RS10340 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10340 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10340 IPR012337 Ribonuclease H-like domain RD08_RS10340 IPR024967 DNA-binding domain, IS481-type RD08_RS10345 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS10345 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS10345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS10350 IPR001789 Signal transduction response regulator, receiver domain RD08_RS10350 IPR011006 CheY-like superfamily RD08_RS10355 IPR010583 MltA-interacting MipA RD08_RS10360 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD08_RS10360 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD08_RS10360 IPR002303 Valine-tRNA ligase RD08_RS10360 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD08_RS10360 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD08_RS10360 IPR010978 tRNA-binding arm RD08_RS10360 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD08_RS10360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS10360 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RD08_RS10365 IPR001564 Nucleoside diphosphate kinase RD08_RS10365 IPR023005 Nucleoside diphosphate kinase, active site RD08_RS10370 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RD08_RS10370 IPR007197 Radical SAM RD08_RS10370 IPR013785 Aldolase-type TIM barrel RD08_RS10370 IPR027492 Dual-specificity RNA methyltransferase RlmN RD08_RS10375 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10380 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type RD08_RS10380 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial RD08_RS10385 IPR004154 Anticodon-binding RD08_RS10385 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RD08_RS10385 IPR015807 Histidine-tRNA ligase RD08_RS10390 IPR011990 Tetratricopeptide-like helical domain RD08_RS10390 IPR018704 Domain of unknown function DUF09976 RD08_RS10390 IPR026039 Uncharacterised protein family UPF0070 RD08_RS10395 IPR002372 Pyrrolo-quinoline quinone repeat RD08_RS10395 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RD08_RS10395 IPR017687 Outer membrane protein assembly factor BamB RD08_RS10395 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RD08_RS10395 IPR027295 Quinonprotein alcohol dehydrogenase-like domain RD08_RS10400 IPR003593 AAA+ ATPase domain RD08_RS10400 IPR005225 Small GTP-binding protein domain RD08_RS10400 IPR006073 GTP binding domain RD08_RS10400 IPR015946 K homology domain-like, alpha/beta RD08_RS10400 IPR016484 GTP-binding protein EngA RD08_RS10400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10400 IPR032859 RD08_RS10400 RD08_RS10405 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RD08_RS10405 IPR004839 Aminotransferase, class I/classII RD08_RS10405 IPR005861 Histidinol-phosphate aminotransferase family RD08_RS10405 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS10405 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS10405 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS10410 IPR005001 Host factor Hfq RD08_RS10410 IPR010920 Like-Sm (LSM) domain RD08_RS10415 IPR006073 GTP binding domain RD08_RS10415 IPR016496 GTPase HflX RD08_RS10415 IPR025121 GTPase HflX N-terminal domain RD08_RS10415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10415 IPR032305 RD08_RS10415 RD08_RS10420 IPR001107 Band 7 protein RD08_RS10420 IPR001972 Stomatin family RD08_RS10420 IPR010201 HflK RD08_RS10420 IPR020980 Menbrane protein HflK, N-terminal RD08_RS10425 IPR001107 Band 7 protein RD08_RS10425 IPR001972 Stomatin family RD08_RS10425 IPR010200 HflC RD08_RS10430 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RD08_RS10430 IPR004517 ATP phosphoribosyltransferase regulatory subunit RD08_RS10435 IPR001114 Adenylosuccinate synthetase RD08_RS10435 IPR018220 Adenylosuccinate synthase, active site RD08_RS10435 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10435 IPR033128 RD08_RS10435 RD08_RS10440 IPR000836 Phosphoribosyltransferase domain RD08_RS10440 IPR029057 Phosphoribosyltransferase-like RD08_RS10445 IPR001911 Ribosomal protein S21 RD08_RS10445 IPR018278 Ribosomal protein S21, conserved site RD08_RS10450 IPR002694 Zinc finger, CHC2-type RD08_RS10450 IPR006171 Toprim domain RD08_RS10450 IPR006295 DNA primase, DnaG RD08_RS10450 IPR013173 DNA primase DnaG, DnaB-binding domain RD08_RS10450 IPR013264 DNA primase, catalytic core, N-terminal RD08_RS10450 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RD08_RS10450 IPR019475 DNA primase, DnaB-helicase binding domain RD08_RS10450 IPR030846 RD08_RS10450 RD08_RS10455 IPR000943 RNA polymerase sigma-70 RD08_RS10455 IPR007127 RNA polymerase sigma factor 70, region 1.1 RD08_RS10455 IPR007624 RNA polymerase sigma-70 region 3 RD08_RS10455 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS10455 IPR007630 RNA polymerase sigma-70 region 4 RD08_RS10455 IPR007631 RNA polymerase sigma factor 70, non-essential domain RD08_RS10455 IPR009042 RNA polymerase sigma-70 region 1.2 RD08_RS10455 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10455 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RD08_RS10455 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS10455 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS10455 IPR014284 RNA polymerase sigma-70 like domain RD08_RS10455 IPR028630 RNA polymerase sigma factor RpoD RD08_RS10470 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10475 IPR001584 Integrase, catalytic core RD08_RS10475 IPR009057 Homeodomain-like RD08_RS10475 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10475 IPR012337 Ribonuclease H-like domain RD08_RS10475 IPR024967 DNA-binding domain, IS481-type RD08_RS10480 IPR001584 Integrase, catalytic core RD08_RS10480 IPR009057 Homeodomain-like RD08_RS10480 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10480 IPR012337 Ribonuclease H-like domain RD08_RS10480 IPR024967 DNA-binding domain, IS481-type RD08_RS10485 IPR002549 Uncharacterised protein family UPF0118 RD08_RS10490 IPR000412 ABC-2 transporter RD08_RS10490 IPR013525 ABC-2 type transporter RD08_RS10495 IPR003439 ABC transporter-like RD08_RS10495 IPR003593 AAA+ ATPase domain RD08_RS10495 IPR017871 ABC transporter, conserved site RD08_RS10495 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10500 IPR016181 Acyl-CoA N-acyltransferase RD08_RS10505 IPR002781 Transmembrane protein TauE like RD08_RS10520 IPR013783 Immunoglobulin-like fold RD08_RS10520 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG RD08_RS10520 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD08_RS10520 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS10520 IPR032879 RD08_RS10520 RD08_RS10525 IPR004678 Cytochrome c oxidase cbb3-type, subunit III RD08_RS10525 IPR009056 Cytochrome c-like domain RD08_RS10525 IPR032858 RD08_RS10525 RD08_RS10535 IPR000883 Cytochrome c oxidase subunit I RD08_RS10535 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RD08_RS10535 IPR009056 Cytochrome c-like domain RD08_RS10545 IPR004714 Cytochrome oxidase maturation protein cbb3-type RD08_RS10550 IPR008250 P-type ATPase, A domain RD08_RS10555 IPR001584 Integrase, catalytic core RD08_RS10555 IPR009057 Homeodomain-like RD08_RS10555 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10555 IPR012337 Ribonuclease H-like domain RD08_RS10555 IPR024967 DNA-binding domain, IS481-type RD08_RS10560 IPR005814 Aminotransferase class-III RD08_RS10560 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RD08_RS10560 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS10560 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS10560 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS10565 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RD08_RS10565 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type RD08_RS10565 IPR004839 Aminotransferase, class I/classII RD08_RS10565 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS10565 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS10565 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS10570 IPR029058 Alpha/Beta hydrolase fold RD08_RS10575 IPR004472 Dethiobiotin synthase BioD RD08_RS10575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS10580 IPR005538 LrgA/CidA family RD08_RS10585 IPR007300 CidB/LrgB family RD08_RS10590 IPR001584 Integrase, catalytic core RD08_RS10590 IPR009057 Homeodomain-like RD08_RS10590 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10590 IPR012337 Ribonuclease H-like domain RD08_RS10590 IPR024967 DNA-binding domain, IS481-type RD08_RS10595 IPR001584 Integrase, catalytic core RD08_RS10595 IPR009057 Homeodomain-like RD08_RS10595 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10595 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10595 IPR012337 Ribonuclease H-like domain RD08_RS10595 IPR024967 DNA-binding domain, IS481-type RD08_RS10600 IPR002078 RNA polymerase sigma factor 54 interaction domain RD08_RS10600 IPR002197 DNA binding HTH domain, Fis-type RD08_RS10600 IPR003018 GAF domain RD08_RS10600 IPR003593 AAA+ ATPase domain RD08_RS10600 IPR009057 Homeodomain-like RD08_RS10600 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD08_RS10600 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10605 IPR015590 Aldehyde dehydrogenase domain RD08_RS10605 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS10605 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS10605 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS10605 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS10605 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD08_RS10610 IPR003680 Flavodoxin-like fold RD08_RS10610 IPR029039 Flavoprotein-like RD08_RS10620 IPR007383 Protein of unknown function DUF445 RD08_RS10620 IPR011989 Armadillo-like helical RD08_RS10620 IPR016024 Armadillo-type fold RD08_RS10625 IPR000847 Transcription regulator HTH, LysR RD08_RS10625 IPR005119 LysR, substrate-binding RD08_RS10625 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10630 IPR003719 Phenazine biosynthesis PhzF protein RD08_RS10635 IPR009874 Protein of unknown function DUF1428 RD08_RS10635 IPR011008 Dimeric alpha-beta barrel RD08_RS10640 IPR002818 ThiJ/PfpI RD08_RS10640 IPR009057 Homeodomain-like RD08_RS10640 IPR018060 DNA binding HTH domain, AraC-type RD08_RS10640 IPR029062 Class I glutamine amidotransferase-like RD08_RS10645 IPR021553 Protein of unknwon function DUF3008 RD08_RS10650 IPR005180 Domain of unknown function DUF302 RD08_RS10655 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS10655 IPR029058 Alpha/Beta hydrolase fold RD08_RS10660 IPR001845 HTH ArsR-type DNA-binding domain RD08_RS10660 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10665 IPR013538 Activator of Hsp90 ATPase homologue 1-like RD08_RS10665 IPR023393 START-like domain RD08_RS10670 IPR001902 Sulphate anion transporter RD08_RS10670 IPR002645 STAS domain RD08_RS10670 IPR011547 Sulphate transporter RD08_RS10675 IPR000524 Transcription regulator HTH, GntR RD08_RS10675 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS10675 IPR011711 GntR, C-terminal RD08_RS10675 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10685 IPR003689 Zinc/iron permease RD08_RS10695 IPR003439 ABC transporter-like RD08_RS10695 IPR003593 AAA+ ATPase domain RD08_RS10695 IPR011527 ABC transporter type 1, transmembrane domain RD08_RS10695 IPR017871 ABC transporter, conserved site RD08_RS10695 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS10700 IPR001584 Integrase, catalytic core RD08_RS10700 IPR009057 Homeodomain-like RD08_RS10700 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10700 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10700 IPR012337 Ribonuclease H-like domain RD08_RS10700 IPR024967 DNA-binding domain, IS481-type RD08_RS10705 IPR000182 GNAT domain RD08_RS10705 IPR016181 Acyl-CoA N-acyltransferase RD08_RS10710 IPR001584 Integrase, catalytic core RD08_RS10710 IPR009057 Homeodomain-like RD08_RS10710 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10710 IPR012337 Ribonuclease H-like domain RD08_RS10710 IPR024967 DNA-binding domain, IS481-type RD08_RS10715 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD08_RS10715 IPR011057 Mss4-like RD08_RS10720 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD08_RS10720 IPR011701 Major facilitator superfamily RD08_RS10720 IPR020846 Major facilitator superfamily domain RD08_RS10725 IPR028973 3-demethylubiquinone-9 3-methyltransferase RD08_RS10725 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS10730 IPR003111 Peptidase S16, lon N-terminal RD08_RS10730 IPR015947 PUA-like domain RD08_RS10740 IPR009057 Homeodomain-like RD08_RS10740 IPR009594 Transcription regulator HTH, AraC, N-terminal RD08_RS10740 IPR018060 DNA binding HTH domain, AraC-type RD08_RS10745 IPR003777 XdhC- CoxI RD08_RS10745 IPR016185 Pre-ATP-grasp domain RD08_RS10745 IPR027051 XdhC Rossmann domain RD08_RS10750 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD08_RS10750 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD08_RS10750 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RD08_RS10755 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS10755 IPR002888 [2Fe-2S]-binding RD08_RS10755 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS10755 IPR012675 Beta-grasp domain RD08_RS10760 IPR021719 Proteinase inhibitor I78 RD08_RS10765 IPR000847 Transcription regulator HTH, LysR RD08_RS10765 IPR005119 LysR, substrate-binding RD08_RS10765 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10770 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD08_RS10770 IPR012349 FMN-binding split barrel RD08_RS10780 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD08_RS10785 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS10785 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS10790 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD08_RS10790 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD08_RS10790 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD08_RS10790 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS10800 IPR001584 Integrase, catalytic core RD08_RS10800 IPR009057 Homeodomain-like RD08_RS10800 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10800 IPR012337 Ribonuclease H-like domain RD08_RS10800 IPR024967 DNA-binding domain, IS481-type RD08_RS10805 IPR001584 Integrase, catalytic core RD08_RS10805 IPR009057 Homeodomain-like RD08_RS10805 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10805 IPR012337 Ribonuclease H-like domain RD08_RS10805 IPR024967 DNA-binding domain, IS481-type RD08_RS10815 IPR005064 Bordetella uptake gene RD08_RS10820 IPR002509 Polysaccharide deacetylase RD08_RS10820 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD08_RS10825 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS10825 IPR029058 Alpha/Beta hydrolase fold RD08_RS10830 IPR000120 Amidase RD08_RS10830 IPR023631 Amidase signature domain RD08_RS10835 IPR000120 Amidase RD08_RS10835 IPR023631 Amidase signature domain RD08_RS10840 IPR002347 Glucose/ribitol dehydrogenase RD08_RS10840 IPR016040 NAD(P)-binding domain RD08_RS10840 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS10850 IPR009197 Microcystin LR degradation protein MlrC RD08_RS10850 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD08_RS10850 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD08_RS10855 IPR004808 AP endonuclease 1 RD08_RS10855 IPR005135 Endonuclease/exonuclease/phosphatase RD08_RS10855 IPR020848 AP endonuclease 1, conserved site RD08_RS10860 IPR007418 Protein of unknown function DUF474 RD08_RS10865 IPR010266 NnrS RD08_RS10870 IPR001486 Globin, truncated bacterial-like RD08_RS10870 IPR009050 Globin-like RD08_RS10870 IPR012292 Globin, structural domain RD08_RS10875 IPR011893 Selenoprotein, Rdx type RD08_RS10875 IPR012336 Thioredoxin-like fold RD08_RS10880 IPR001584 Integrase, catalytic core RD08_RS10880 IPR009057 Homeodomain-like RD08_RS10880 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10880 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10880 IPR012337 Ribonuclease H-like domain RD08_RS10880 IPR024967 DNA-binding domain, IS481-type RD08_RS10885 IPR001584 Integrase, catalytic core RD08_RS10885 IPR009057 Homeodomain-like RD08_RS10885 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10885 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10885 IPR012337 Ribonuclease H-like domain RD08_RS10885 IPR024967 DNA-binding domain, IS481-type RD08_RS10890 IPR005064 Bordetella uptake gene RD08_RS10895 IPR000847 Transcription regulator HTH, LysR RD08_RS10895 IPR005119 LysR, substrate-binding RD08_RS10895 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS10900 IPR016195 Polymerase/histidinol phosphatase-like RD08_RS10900 IPR022028 Protein of unknown function DUF3604 RD08_RS10905 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD08_RS10905 IPR012340 Nucleic acid-binding, OB-fold RD08_RS10905 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD08_RS10905 IPR016039 Thiolase-like RD08_RS10910 IPR002155 Thiolase RD08_RS10910 IPR016039 Thiolase-like RD08_RS10910 IPR020616 Thiolase, N-terminal RD08_RS10910 IPR020617 Thiolase, C-terminal RD08_RS10915 IPR000873 AMP-dependent synthetase/ligase RD08_RS10915 IPR028154 AMP-dependent ligase, C-terminal RD08_RS10920 IPR013094 Alpha/beta hydrolase fold-3 RD08_RS10920 IPR029058 Alpha/Beta hydrolase fold RD08_RS10925 IPR003673 CoA-transferase family III RD08_RS10925 IPR023606 CoA-transferase family III domain RD08_RS10930 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS10930 IPR001055 Adrenodoxin RD08_RS10930 IPR012675 Beta-grasp domain RD08_RS10930 IPR018298 Adrenodoxin, iron-sulphur binding site RD08_RS10935 IPR002347 Glucose/ribitol dehydrogenase RD08_RS10935 IPR016040 NAD(P)-binding domain RD08_RS10935 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS10940 IPR001753 Crotonase superfamily RD08_RS10940 IPR029045 ClpP/crotonase-like domain RD08_RS10945 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD08_RS10945 IPR032710 RD08_RS10945 RD08_RS10950 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RD08_RS10950 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD08_RS10950 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD08_RS10950 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS10955 IPR028081 Leucine-binding protein domain RD08_RS10955 IPR028082 Periplasmic binding protein-like I RD08_RS10960 IPR001851 ABC transporter, permease RD08_RS10965 IPR001851 ABC transporter, permease RD08_RS10970 IPR001584 Integrase, catalytic core RD08_RS10970 IPR009057 Homeodomain-like RD08_RS10970 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS10970 IPR012337 Ribonuclease H-like domain RD08_RS10970 IPR024967 DNA-binding domain, IS481-type RD08_RS10980 IPR006254 Isocitrate lyase RD08_RS10980 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS10980 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RD08_RS10985 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RD08_RS10985 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RD08_RS10985 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RD08_RS10990 IPR020846 Major facilitator superfamily domain RD08_RS10995 IPR011701 Major facilitator superfamily RD08_RS10995 IPR020846 Major facilitator superfamily domain RD08_RS11000 IPR000462 CDP-alcohol phosphatidyltransferase RD08_RS11000 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RD08_RS11005 IPR000305 GIY-YIG nuclease superfamily RD08_RS11005 IPR001162 UvrC family homology region RD08_RS11005 IPR001943 UVR domain RD08_RS11005 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD08_RS11005 IPR004791 UvrABC system, subunit C RD08_RS11005 IPR010994 RuvA domain 2-like RD08_RS11005 IPR027299 GIY-YIG domain RD08_RS11010 IPR001764 Glycoside hydrolase, family 3, N-terminal RD08_RS11010 IPR017853 Glycoside hydrolase, superfamily RD08_RS11010 IPR019800 Glycoside hydrolase, family 3, active site RD08_RS11010 IPR022956 Beta-hexosaminidase, bacterial RD08_RS11015 IPR002582 Holo-[acyl carrier protein] synthase RD08_RS11015 IPR004568 Phosphopantethiene-protein transferase domain RD08_RS11015 IPR008278 4'-phosphopantetheinyl transferase superfamily RD08_RS11020 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ RD08_RS11020 IPR013785 Aldolase-type TIM barrel RD08_RS11025 IPR003423 Outer membrane efflux protein RD08_RS11030 IPR001036 Acriflavin resistance protein RD08_RS11030 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RD08_RS11030 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD08_RS11035 IPR006143 RND efflux pump, membrane fusion protein RD08_RS11035 IPR032317 RD08_RS11035 RD08_RS11040 IPR001867 Signal transduction response regulator, C-terminal RD08_RS11040 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11040 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS11045 IPR001227 Acyl transferase domain RD08_RS11045 IPR002641 Patatin/Phospholipase A2-related RD08_RS11045 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD08_RS11045 IPR021095 Protein of unknown function DUF3734 RD08_RS11050 IPR025411 Domain of unknown function DUF4136 RD08_RS11055 IPR000847 Transcription regulator HTH, LysR RD08_RS11055 IPR003725 Molybdenum-binding protein, N-terminal RD08_RS11055 IPR004606 Molybdenum-pterin binding RD08_RS11055 IPR005116 Transport-associated OB, type 1 RD08_RS11055 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS11055 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11055 IPR016462 Molybdate-dependent transcriptional regulator, ModE RD08_RS11060 IPR003439 ABC transporter-like RD08_RS11060 IPR003593 AAA+ ATPase domain RD08_RS11060 IPR017871 ABC transporter, conserved site RD08_RS11060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11070 IPR007487 ABC transporter, substrate-binding protein RD08_RS11070 IPR028082 Periplasmic binding protein-like I RD08_RS11075 IPR001424 Superoxide dismutase, copper/zinc binding domain RD08_RS11075 IPR018152 Superoxide dismutase, copper/zinc, binding site RD08_RS11075 IPR024134 RD08_RS11075 RD08_RS11080 IPR005064 Bordetella uptake gene RD08_RS11090 IPR001753 Crotonase superfamily RD08_RS11090 IPR029045 ClpP/crotonase-like domain RD08_RS11095 IPR007956 Malonyl-CoA decarboxylase RD08_RS11100 IPR000524 Transcription regulator HTH, GntR RD08_RS11100 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS11100 IPR011711 GntR, C-terminal RD08_RS11100 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS11110 IPR002155 Thiolase RD08_RS11110 IPR016039 Thiolase-like RD08_RS11110 IPR020610 Thiolase, active site RD08_RS11110 IPR020615 Thiolase, acyl-enzyme intermediate active site RD08_RS11110 IPR020616 Thiolase, N-terminal RD08_RS11110 IPR020617 Thiolase, C-terminal RD08_RS11115 IPR004370 4-oxalocrotonate tautomerase RD08_RS11115 IPR014347 Tautomerase/MIF superfamily RD08_RS11120 IPR003439 ABC transporter-like RD08_RS11120 IPR003593 AAA+ ATPase domain RD08_RS11120 IPR005892 Glycine betaine transport ATP-binding subunit RD08_RS11120 IPR017871 ABC transporter, conserved site RD08_RS11120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11125 IPR000515 MetI-like domain RD08_RS11130 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RD08_RS11135 IPR001584 Integrase, catalytic core RD08_RS11135 IPR009057 Homeodomain-like RD08_RS11135 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11135 IPR012337 Ribonuclease H-like domain RD08_RS11135 IPR024967 DNA-binding domain, IS481-type RD08_RS11140 IPR003333 Mycolic acid cyclopropane synthase RD08_RS11140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS11145 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RD08_RS11145 IPR011701 Major facilitator superfamily RD08_RS11145 IPR020846 Major facilitator superfamily domain RD08_RS11150 IPR001383 Ribosomal protein L28 RD08_RS11150 IPR026569 Ribosomal protein L28/L24 RD08_RS11155 IPR001705 Ribosomal protein L33 RD08_RS11155 IPR011332 Zinc-binding ribosomal protein RD08_RS11160 IPR001902 Sulphate anion transporter RD08_RS11160 IPR002645 STAS domain RD08_RS11160 IPR011547 Sulphate transporter RD08_RS11165 IPR001584 Integrase, catalytic core RD08_RS11165 IPR009057 Homeodomain-like RD08_RS11165 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11165 IPR012337 Ribonuclease H-like domain RD08_RS11165 IPR024967 DNA-binding domain, IS481-type RD08_RS11170 IPR001584 Integrase, catalytic core RD08_RS11170 IPR009057 Homeodomain-like RD08_RS11170 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11170 IPR012337 Ribonuclease H-like domain RD08_RS11170 IPR024967 DNA-binding domain, IS481-type RD08_RS11175 IPR000119 Histone-like bacterial DNA-binding protein RD08_RS11175 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD08_RS11180 IPR000835 MarR-type HTH domain RD08_RS11180 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11185 IPR011701 Major facilitator superfamily RD08_RS11185 IPR020846 Major facilitator superfamily domain RD08_RS11190 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD08_RS11190 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD08_RS11190 IPR002302 Leucine-tRNA ligase RD08_RS11190 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD08_RS11190 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD08_RS11190 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD08_RS11190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS11190 IPR015413 Methionyl/Leucyl tRNA synthetase RD08_RS11190 IPR025709 Leucyl-tRNA synthetase, editing domain RD08_RS11195 IPR007485 Lipopolysaccharide assembly, LptE RD08_RS11205 IPR000965 Gamma-glutamyl phosphate reductase GPR RD08_RS11205 IPR012134 Glutamate-5-semialdehyde dehydrogenase RD08_RS11205 IPR015590 Aldehyde dehydrogenase domain RD08_RS11205 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS11205 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS11205 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS11205 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site RD08_RS11215 IPR000120 Amidase RD08_RS11215 IPR020556 Amidase, conserved site RD08_RS11215 IPR023631 Amidase signature domain RD08_RS11220 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD08_RS11220 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD08_RS11220 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS11220 IPR016040 NAD(P)-binding domain RD08_RS11225 IPR016181 Acyl-CoA N-acyltransferase RD08_RS11225 IPR031165 RD08_RS11225 RD08_RS11230 IPR023006 Uncharacterised protein family UPF0225 RD08_RS11230 IPR032710 RD08_RS11230 RD08_RS11265 IPR001584 Integrase, catalytic core RD08_RS11265 IPR009057 Homeodomain-like RD08_RS11265 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11265 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11265 IPR012337 Ribonuclease H-like domain RD08_RS11265 IPR024967 DNA-binding domain, IS481-type RD08_RS11270 IPR004659 Ribonuclease E/G RD08_RS11270 IPR012340 Nucleic acid-binding, OB-fold RD08_RS11270 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RD08_RS11270 IPR022967 RNA-binding domain, S1 RD08_RS11275 IPR001086 Prephenate dehydratase RD08_RS11275 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RD08_RS11280 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS11280 IPR009057 Homeodomain-like RD08_RS11280 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS11285 IPR011701 Major facilitator superfamily RD08_RS11285 IPR020846 Major facilitator superfamily domain RD08_RS11290 IPR003439 ABC transporter-like RD08_RS11290 IPR003593 AAA+ ATPase domain RD08_RS11290 IPR011527 ABC transporter type 1, transmembrane domain RD08_RS11290 IPR011917 ABC transporter, lipid A export, MsbA RD08_RS11290 IPR017871 ABC transporter, conserved site RD08_RS11290 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11295 IPR002201 Glycosyl transferase, family 9 RD08_RS11300 IPR003848 Domain of unknown function DUF218 RD08_RS11300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS11305 IPR005358 Putative zinc- or iron-chelating domain containing protein RD08_RS11310 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS11315 IPR002509 Polysaccharide deacetylase RD08_RS11315 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD08_RS11320 IPR000917 Sulfatase RD08_RS11320 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD08_RS11320 IPR017850 Alkaline-phosphatase-like, core domain RD08_RS11325 IPR001296 Glycosyl transferase, family 1 RD08_RS11325 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS11330 IPR001173 Glycosyltransferase 2-like RD08_RS11330 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS11335 IPR002509 Polysaccharide deacetylase RD08_RS11335 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD08_RS11340 IPR001296 Glycosyl transferase, family 1 RD08_RS11340 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS11345 IPR003141 Polymerase/histidinol phosphatase, N-terminal RD08_RS11345 IPR004013 PHP, C-terminal RD08_RS11345 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD08_RS11345 IPR004805 DNA polymerase III, alpha subunit RD08_RS11345 IPR011708 Bacterial DNA polymerase III, alpha subunit RD08_RS11345 IPR012340 Nucleic acid-binding, OB-fold RD08_RS11345 IPR016195 Polymerase/histidinol phosphatase-like RD08_RS11345 IPR029460 DNA polymerase, helix-hairpin-helix motif RD08_RS11350 IPR007803 Arginine/Asparagine/Proline hydroxylase RD08_RS11350 IPR027443 Isopenicillin N synthase-like RD08_RS11355 IPR001650 Helicase, C-terminal RD08_RS11355 IPR003593 AAA+ ATPase domain RD08_RS11355 IPR007502 Helicase-associated domain RD08_RS11355 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type RD08_RS11355 IPR011709 Domain of unknown function DUF1605 RD08_RS11355 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS11355 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal RD08_RS11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11360 IPR000182 GNAT domain RD08_RS11360 IPR001048 Aspartate/glutamate/uridylate kinase RD08_RS11360 IPR010167 Amino-acid N-acetyltransferase (ArgA) RD08_RS11360 IPR016181 Acyl-CoA N-acyltransferase RD08_RS11365 IPR007457 Fe(II) trafficking protein YggX RD08_RS11370 IPR007312 Phosphoesterase RD08_RS11370 IPR008475 Bacterial phospholipase C, C-terminal domain RD08_RS11375 IPR026022 PhoU domain RD08_RS11375 IPR028366 Phosphate transport system protein PhoU RD08_RS11380 IPR004788 Ribose 5-phosphate isomerase, type A RD08_RS11380 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup RD08_RS11385 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS11385 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS11385 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS11385 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS11390 IPR003798 DNA recombination RmuC RD08_RS11395 IPR019647 PhoP regulatory network protein YrbL RD08_RS11400 IPR003180 Methylpurine-DNA glycosylase (MPG) RD08_RS11400 IPR011034 Formyl transferase, C-terminal-like RD08_RS11405 IPR006504 Transcriptional regulator Spx/MgsR RD08_RS11405 IPR006660 Arsenate reductase-like RD08_RS11405 IPR012336 Thioredoxin-like fold RD08_RS11410 IPR000515 MetI-like domain RD08_RS11415 IPR000515 MetI-like domain RD08_RS11420 IPR003439 ABC transporter-like RD08_RS11420 IPR003593 AAA+ ATPase domain RD08_RS11420 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit RD08_RS11420 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS11420 IPR013611 Transport-associated OB, type 2 RD08_RS11420 IPR017871 ABC transporter, conserved site RD08_RS11420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11425 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RD08_RS11430 IPR010440 Lipopolysaccharide kinase RD08_RS11430 IPR011009 Protein kinase-like domain RD08_RS11430 IPR022826 3-deoxy-D-manno-octulosonic acid kinase RD08_RS11435 IPR001486 Globin, truncated bacterial-like RD08_RS11435 IPR009050 Globin-like RD08_RS11435 IPR012292 Globin, structural domain RD08_RS11435 IPR019795 Globin, bacterial-like, conserved site RD08_RS11440 IPR003838 Permease FtsX-like RD08_RS11445 IPR004682 TRAP dicarboxylate transporter RD08_RS11445 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS11450 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS11455 IPR004681 TRAP transporter permease protein RD08_RS11455 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS11460 IPR001584 Integrase, catalytic core RD08_RS11460 IPR009057 Homeodomain-like RD08_RS11460 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11460 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11460 IPR012337 Ribonuclease H-like domain RD08_RS11460 IPR024967 DNA-binding domain, IS481-type RD08_RS11475 IPR002020 Citrate synthase-like RD08_RS11475 IPR010953 Citrate synthase, type I RD08_RS11475 IPR016142 Citrate synthase-like, large alpha subdomain RD08_RS11475 IPR016143 Citrate synthase-like, small alpha subdomain RD08_RS11475 IPR019810 Citrate synthase active site RD08_RS11475 IPR024176 Citrate synthase, bacterial-type RD08_RS11480 IPR005631 Flavinator of succinate dehydrogenase RD08_RS11485 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS11485 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RD08_RS11485 IPR009051 Alpha-helical ferredoxin RD08_RS11485 IPR012675 Beta-grasp domain RD08_RS11485 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS11485 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RD08_RS11490 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RD08_RS11490 IPR003953 FAD binding domain RD08_RS11490 IPR011281 Succinate dehydrogenase, flavoprotein subunit RD08_RS11490 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RD08_RS11490 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RD08_RS11490 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS11490 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD08_RS11490 IPR030664 RD08_RS11490 RD08_RS11495 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RD08_RS11495 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RD08_RS11500 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RD08_RS11500 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RD08_RS11505 IPR000524 Transcription regulator HTH, GntR RD08_RS11505 IPR011663 UbiC transcription regulator-associated RD08_RS11505 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11505 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS11510 IPR001236 Lactate/malate dehydrogenase, N-terminal RD08_RS11510 IPR001557 L-lactate/malate dehydrogenase RD08_RS11510 IPR010945 Malate dehydrogenase, type 2 RD08_RS11510 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RD08_RS11510 IPR016040 NAD(P)-binding domain RD08_RS11510 IPR022383 Lactate/malate dehydrogenase, C-terminal RD08_RS11520 IPR002020 Citrate synthase-like RD08_RS11520 IPR011278 2-methylcitrate synthase/citrate synthase type I RD08_RS11520 IPR016142 Citrate synthase-like, large alpha subdomain RD08_RS11520 IPR016143 Citrate synthase-like, small alpha subdomain RD08_RS11520 IPR019810 Citrate synthase active site RD08_RS11520 IPR024176 Citrate synthase, bacterial-type RD08_RS11525 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD08_RS11525 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD08_RS11525 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent RD08_RS11525 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS11525 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD08_RS11525 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD08_RS11525 IPR015937 Aconitase/isopropylmalate dehydratase RD08_RS11530 IPR007400 PrpF protein RD08_RS11530 IPR012709 PrpF, AcnD-accessory RD08_RS11535 IPR005656 MmgE/PrpD RD08_RS11535 IPR012705 2-methylcitrate dehydratase PrpD RD08_RS11540 IPR005265 Uncharacterised protein family UPF0093 RD08_RS11545 IPR000241 Putative RNA methylase domain RD08_RS11545 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD08_RS11545 IPR004114 THUMP RD08_RS11545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS11555 IPR010432 RDD RD08_RS11560 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD08_RS11560 IPR029052 Metallo-dependent phosphatase-like RD08_RS11565 IPR000873 AMP-dependent synthetase/ligase RD08_RS11565 IPR020845 AMP-binding, conserved site RD08_RS11565 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS11570 IPR001451 Bacterial transferase hexapeptide repeat RD08_RS11570 IPR011004 Trimeric LpxA-like RD08_RS11575 IPR000397 Heat shock protein Hsp33 RD08_RS11575 IPR016153 Heat shock protein Hsp33, N-terminal RD08_RS11575 IPR016154 Heat shock protein Hsp33, C-terminal RD08_RS11575 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RD08_RS11585 IPR011051 RmlC-like cupin domain RD08_RS11585 IPR013096 Cupin 2, conserved barrel RD08_RS11585 IPR014710 RmlC-like jelly roll fold RD08_RS11590 IPR003779 Carboxymuconolactone decarboxylase-like RD08_RS11590 IPR004675 Alkylhydroperoxidase AhpD core RD08_RS11590 IPR029032 AhpD-like RD08_RS11595 IPR016040 NAD(P)-binding domain RD08_RS11600 IPR001867 Signal transduction response regulator, C-terminal RD08_RS11600 IPR011990 Tetratricopeptide-like helical domain RD08_RS11600 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11600 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS11600 IPR019734 Tetratricopeptide repeat RD08_RS11605 IPR007060 Septum formation initiator FtsL/DivIC RD08_RS11605 IPR023081 Cell division protein FtsB RD08_RS11610 IPR000941 Enolase RD08_RS11610 IPR020809 Enolase, conserved site RD08_RS11610 IPR020810 Enolase, C-terminal RD08_RS11610 IPR020811 Enolase, N-terminal RD08_RS11610 IPR029017 Enolase N-terminal domain-like RD08_RS11610 IPR029065 Enolase C-terminal domain-like RD08_RS11615 IPR010753 Protein of unknown function DUF1330 RD08_RS11615 IPR011008 Dimeric alpha-beta barrel RD08_RS11620 IPR006218 DAHP synthetase I/KDSA RD08_RS11620 IPR006269 3-deoxy-8-phosphooctulonate synthase RD08_RS11620 IPR013785 Aldolase-type TIM barrel RD08_RS11625 IPR004468 CTP synthase RD08_RS11625 IPR017456 CTP synthase, N-terminal RD08_RS11625 IPR017926 Glutamine amidotransferase RD08_RS11625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11625 IPR029062 Class I glutamine amidotransferase-like RD08_RS11630 IPR001584 Integrase, catalytic core RD08_RS11630 IPR009057 Homeodomain-like RD08_RS11630 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11630 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11630 IPR012337 Ribonuclease H-like domain RD08_RS11630 IPR024967 DNA-binding domain, IS481-type RD08_RS11635 IPR000587 Creatinase, N-terminal RD08_RS11635 IPR000994 Peptidase M24, structural domain RD08_RS11635 IPR028980 Creatinase/Aminopeptidase P, N-terminal RD08_RS11635 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RD08_RS11635 IPR032416 RD08_RS11635 RD08_RS11640 IPR007035 Peptidase M55, D-aminopeptidase RD08_RS11640 IPR027476 D-aminopeptidase, N-terminal RD08_RS11645 IPR005321 Peptidase S58, DmpA RD08_RS11645 IPR016117 ArgJ-like domain RD08_RS11650 IPR000515 MetI-like domain RD08_RS11650 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD08_RS11655 IPR000515 MetI-like domain RD08_RS11660 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS11660 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site RD08_RS11660 IPR030678 RD08_RS11660 RD08_RS11665 IPR003439 ABC transporter-like RD08_RS11665 IPR003593 AAA+ ATPase domain RD08_RS11665 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS11665 IPR017871 ABC transporter, conserved site RD08_RS11665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11670 IPR000246 Peptidase T2, asparaginase 2 RD08_RS11670 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS11675 IPR000281 Helix-turn-helix protein RpiR RD08_RS11675 IPR001347 Sugar isomerase (SIS) RD08_RS11675 IPR009057 Homeodomain-like RD08_RS11675 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11680 IPR004164 Coenzyme A transferase active site RD08_RS11680 IPR004165 Coenzyme A transferase family I RD08_RS11680 IPR012791 3-oxoacid CoA-transferase, subunit B RD08_RS11690 IPR029069 HotDog domain RD08_RS11695 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase RD08_RS11695 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS11700 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD08_RS11700 IPR016040 NAD(P)-binding domain RD08_RS11705 IPR001128 Cytochrome P450 RD08_RS11710 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD08_RS11710 IPR011008 Dimeric alpha-beta barrel RD08_RS11715 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase RD08_RS11715 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS11715 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS11715 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS11715 IPR023603 Threonine aldolase RD08_RS11720 IPR000620 Drug/metabolite transporter RD08_RS11725 IPR000873 AMP-dependent synthetase/ligase RD08_RS11725 IPR011904 Acetate-CoA ligase RD08_RS11725 IPR020845 AMP-binding, conserved site RD08_RS11725 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS11725 IPR032387 RD08_RS11725 RD08_RS11730 IPR020846 Major facilitator superfamily domain RD08_RS11730 IPR024671 Autophagy-related protein 22-like RD08_RS11735 IPR005624 Domain of unknown function DUF336 RD08_RS11740 IPR000873 AMP-dependent synthetase/ligase RD08_RS11740 IPR012694 Propionate--CoA ligase RD08_RS11740 IPR020845 AMP-binding, conserved site RD08_RS11740 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS11745 IPR000064 Endopeptidase, NLPC/P60 domain RD08_RS11750 IPR016772 Uncharacterised conserved protein UCP020408 RD08_RS11755 IPR001584 Integrase, catalytic core RD08_RS11755 IPR009057 Homeodomain-like RD08_RS11755 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11755 IPR012337 Ribonuclease H-like domain RD08_RS11755 IPR024967 DNA-binding domain, IS481-type RD08_RS11760 IPR000847 Transcription regulator HTH, LysR RD08_RS11760 IPR005119 LysR, substrate-binding RD08_RS11760 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11765 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD08_RS11765 IPR015590 Aldehyde dehydrogenase domain RD08_RS11765 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS11765 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS11765 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS11765 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS11770 IPR028081 Leucine-binding protein domain RD08_RS11770 IPR028082 Periplasmic binding protein-like I RD08_RS11775 IPR000847 Transcription regulator HTH, LysR RD08_RS11775 IPR005119 LysR, substrate-binding RD08_RS11775 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11780 IPR005495 Permease YjgP/YjgQ, predicted RD08_RS11780 IPR030922 RD08_RS11780 RD08_RS11785 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RD08_RS11785 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RD08_RS11785 IPR011356 Leucine aminopeptidase/peptidase B RD08_RS11785 IPR023042 Peptidase M17, leucine aminopeptidase RD08_RS11790 IPR007459 DNA polymerase III chi subunit, HolC RD08_RS11800 IPR006214 Bax inhibitor 1-related RD08_RS11805 IPR005064 Bordetella uptake gene RD08_RS11810 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD08_RS11815 IPR001584 Integrase, catalytic core RD08_RS11815 IPR009057 Homeodomain-like RD08_RS11815 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11815 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11815 IPR012337 Ribonuclease H-like domain RD08_RS11815 IPR024967 DNA-binding domain, IS481-type RD08_RS11820 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD08_RS11825 IPR000847 Transcription regulator HTH, LysR RD08_RS11825 IPR005119 LysR, substrate-binding RD08_RS11825 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11830 IPR003717 Recombination protein O, RecO RD08_RS11830 IPR012340 Nucleic acid-binding, OB-fold RD08_RS11830 IPR022572 DNA replication/recombination mediator RecO, N-terminal RD08_RS11835 IPR004044 K Homology domain, type 2 RD08_RS11835 IPR005225 Small GTP-binding protein domain RD08_RS11835 IPR005662 GTP-binding protein Era RD08_RS11835 IPR006073 GTP binding domain RD08_RS11835 IPR009019 K homology domain, prokaryotic type RD08_RS11835 IPR015946 K homology domain-like, alpha/beta RD08_RS11835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11840 IPR000999 Ribonuclease III domain RD08_RS11840 IPR011907 Ribonuclease III RD08_RS11840 IPR014720 Double-stranded RNA-binding domain RD08_RS11845 IPR000223 Peptidase S26A, signal peptidase I RD08_RS11845 IPR015927 Peptidase S24/S26A/S26B/S26C RD08_RS11845 IPR019533 Peptidase S26 RD08_RS11845 IPR019756 Peptidase S26A, signal peptidase I, serine active site RD08_RS11845 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RD08_RS11845 IPR019759 Peptidase S24/S26A/S26B RD08_RS11845 IPR019766 Peptidase S26A, all-beta subdomain RD08_RS11845 IPR028360 Peptidase S24/S26, beta-ribbon domain RD08_RS11850 IPR000640 Translation elongation factor EFG, V domain RD08_RS11850 IPR000795 Elongation factor, GTP-binding domain RD08_RS11850 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD08_RS11850 IPR005225 Small GTP-binding protein domain RD08_RS11850 IPR006297 Elongation factor 4 RD08_RS11850 IPR009000 Translation protein, beta-barrel domain RD08_RS11850 IPR009022 Elongation factor G, III-V domain RD08_RS11850 IPR013842 GTP-binding protein LepA, C-terminal RD08_RS11850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS11850 IPR031157 RD08_RS11850 RD08_RS11855 IPR001478 PDZ domain RD08_RS11855 IPR001940 Peptidase S1C RD08_RS11855 IPR009003 Trypsin-like cysteine/serine peptidase domain RD08_RS11855 IPR011782 Peptidase S1C, Do RD08_RS11860 IPR005588 MucB/RseB RD08_RS11860 IPR033434 RD08_RS11860 RD08_RS11860 IPR033436 RD08_RS11860 RD08_RS11865 IPR005572 Anti sigma-E protein RseA, N-terminal RD08_RS11870 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD08_RS11870 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS11870 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS11870 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD08_RS11870 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS11870 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS11870 IPR014284 RNA polymerase sigma-70 like domain RD08_RS11870 IPR014286 RNA polymerase sigma-70 RpoE type RD08_RS11880 IPR014030 Beta-ketoacyl synthase, N-terminal RD08_RS11880 IPR014031 Beta-ketoacyl synthase, C-terminal RD08_RS11880 IPR016039 Thiolase-like RD08_RS11880 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RD08_RS11880 IPR018201 Beta-ketoacyl synthase, active site RD08_RS11880 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RD08_RS11885 IPR003231 Acyl carrier protein (ACP) RD08_RS11885 IPR006162 Phosphopantetheine attachment site RD08_RS11885 IPR009081 Acyl carrier protein-like RD08_RS11890 IPR002347 Glucose/ribitol dehydrogenase RD08_RS11890 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD08_RS11890 IPR016040 NAD(P)-binding domain RD08_RS11890 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS11895 IPR001227 Acyl transferase domain RD08_RS11895 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RD08_RS11895 IPR014043 Acyl transferase RD08_RS11895 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD08_RS11895 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RD08_RS11895 IPR020801 Polyketide synthase, acyl transferase domain RD08_RS11895 IPR024925 Malonyl CoA-acyl carrier protein transacylase RD08_RS11900 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RD08_RS11900 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD08_RS11900 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD08_RS11900 IPR016039 Thiolase-like RD08_RS11905 IPR003664 Fatty acid synthesis PlsX protein RD08_RS11905 IPR012281 Phospholipid biosynthesis protein, PlsX-like RD08_RS11905 IPR024084 Isopropylmalate dehydrogenase-like domain RD08_RS11910 IPR002677 Ribosomal protein L32p RD08_RS11910 IPR011332 Zinc-binding ribosomal protein RD08_RS11915 IPR003772 Protein of unknown function DUF177 RD08_RS11920 IPR003697 Maf-like protein RD08_RS11920 IPR029001 Inosine triphosphate pyrophosphatase-like RD08_RS11925 IPR000878 Tetrapyrrole methylase RD08_RS11925 IPR008189 rRNA small subunit methyltransferase I RD08_RS11925 IPR014776 Tetrapyrrole methylase, subdomain 2 RD08_RS11930 IPR002477 Peptidoglycan binding-like RD08_RS11930 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RD08_RS11935 IPR032692 RD08_RS11935 RD08_RS11940 IPR011701 Major facilitator superfamily RD08_RS11940 IPR020846 Major facilitator superfamily domain RD08_RS11945 IPR005583 Uncharacterised protein family UPF0246 RD08_RS11950 IPR001584 Integrase, catalytic core RD08_RS11950 IPR009057 Homeodomain-like RD08_RS11950 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS11950 IPR012337 Ribonuclease H-like domain RD08_RS11950 IPR024967 DNA-binding domain, IS481-type RD08_RS11960 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain RD08_RS11960 IPR011060 Ribulose-phosphate binding barrel RD08_RS11960 IPR013785 Aldolase-type TIM barrel RD08_RS11965 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS11970 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS11975 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS11975 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RD08_RS11975 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD08_RS11980 IPR001406 Pseudouridine synthase I, TruA RD08_RS11980 IPR020094 Pseudouridine synthase I, TruA, N-terminal RD08_RS11980 IPR020095 Pseudouridine synthase I, TruA, C-terminal RD08_RS11980 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RD08_RS11980 IPR020103 Pseudouridine synthase, catalytic domain RD08_RS11985 IPR018392 LysM domain RD08_RS11985 IPR020012 Motility protein FimV, N-terminal RD08_RS11990 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RD08_RS11990 IPR000534 Semialdehyde dehydrogenase, NAD-binding RD08_RS11990 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type RD08_RS11990 IPR012080 Aspartate-semialdehyde dehydrogenase RD08_RS11990 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RD08_RS11990 IPR016040 NAD(P)-binding domain RD08_RS11995 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD08_RS11995 IPR004429 Isopropylmalate dehydrogenase RD08_RS11995 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD08_RS11995 IPR024084 Isopropylmalate dehydrogenase-like domain RD08_RS12000 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD08_RS12000 IPR004431 3-isopropylmalate dehydratase, small subunit RD08_RS12000 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS12000 IPR015937 Aconitase/isopropylmalate dehydratase RD08_RS12005 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD08_RS12005 IPR004430 3-isopropylmalate dehydratase, large subunit RD08_RS12005 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD08_RS12005 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD08_RS12005 IPR015937 Aconitase/isopropylmalate dehydratase RD08_RS12005 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD08_RS12010 IPR024370 PBP domain RD08_RS12015 IPR003439 ABC transporter-like RD08_RS12015 IPR003593 AAA+ ATPase domain RD08_RS12015 IPR017871 ABC transporter, conserved site RD08_RS12015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS12020 IPR000515 MetI-like domain RD08_RS12025 IPR000847 Transcription regulator HTH, LysR RD08_RS12025 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12025 IPR024370 PBP domain RD08_RS12035 IPR006471 Formate dehydrogenase, gamma subunit RD08_RS12035 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RD08_RS12035 IPR016174 Di-haem cytochrome, transmembrane RD08_RS12040 IPR012336 Thioredoxin-like fold RD08_RS12050 IPR006656 Molybdopterin oxidoreductase RD08_RS12050 IPR006657 Molydopterin dinucleotide-binding domain RD08_RS12050 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RD08_RS12050 IPR009010 Aspartate decarboxylase-like domain RD08_RS12050 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RD08_RS12055 IPR014177 Formate dehydrogenase, TAT signal-containing RD08_RS12060 IPR020945 DMSO/Nitrate reductase chaperone RD08_RS12065 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD08_RS12065 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS12070 IPR021735 Protein of unknown function DUF3306 RD08_RS12075 IPR021736 Protein of unknown function DUF3305 RD08_RS12080 IPR000808 Mrp, conserved site RD08_RS12080 IPR002744 Domain of unknown function DUF59 RD08_RS12080 IPR019591 Mrp/NBP35 ATP-binding protein RD08_RS12080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS12085 IPR013482 Molybdenum cofactor guanylyltransferase RD08_RS12085 IPR025877 MobA-like NTP transferase domain RD08_RS12085 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS12090 IPR001453 Molybdopterin binding domain RD08_RS12090 IPR005110 MoeA, N-terminal and linker domain RD08_RS12090 IPR005111 MoeA, C-terminal, domain IV RD08_RS12095 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain RD08_RS12095 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS12100 IPR001915 Peptidase M48 RD08_RS12105 IPR000453 Chorismate synthase RD08_RS12105 IPR020541 Chorismate synthase, conserved site RD08_RS12110 IPR001633 EAL domain RD08_RS12110 IPR029787 Nucleotide cyclase RD08_RS12120 IPR001584 Integrase, catalytic core RD08_RS12120 IPR009057 Homeodomain-like RD08_RS12120 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12120 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12120 IPR012337 Ribonuclease H-like domain RD08_RS12120 IPR024967 DNA-binding domain, IS481-type RD08_RS12125 IPR000515 MetI-like domain RD08_RS12130 IPR003439 ABC transporter-like RD08_RS12130 IPR003593 AAA+ ATPase domain RD08_RS12130 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS12130 IPR013611 Transport-associated OB, type 2 RD08_RS12130 IPR017871 ABC transporter, conserved site RD08_RS12130 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS12135 IPR000847 Transcription regulator HTH, LysR RD08_RS12135 IPR005119 LysR, substrate-binding RD08_RS12135 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12140 IPR013078 Histidine phosphatase superfamily, clade-1 RD08_RS12140 IPR029033 Histidine phosphatase superfamily RD08_RS12150 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD08_RS12150 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RD08_RS12150 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RD08_RS12150 IPR006275 Carbamoyl-phosphate synthase, large subunit RD08_RS12150 IPR011607 Methylglyoxal synthase-like domain RD08_RS12150 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS12150 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS12150 IPR016185 Pre-ATP-grasp domain RD08_RS12155 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain RD08_RS12155 IPR006274 Carbamoyl-phosphate synthase, small subunit RD08_RS12155 IPR017926 Glutamine amidotransferase RD08_RS12155 IPR029062 Class I glutamine amidotransferase-like RD08_RS12160 IPR001585 Transaldolase RD08_RS12160 IPR004730 Transaldolase type 1 RD08_RS12160 IPR013785 Aldolase-type TIM barrel RD08_RS12160 IPR018225 Transaldolase, active site RD08_RS12165 IPR001584 Integrase, catalytic core RD08_RS12165 IPR009057 Homeodomain-like RD08_RS12165 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12165 IPR012337 Ribonuclease H-like domain RD08_RS12165 IPR024967 DNA-binding domain, IS481-type RD08_RS12170 IPR001584 Integrase, catalytic core RD08_RS12170 IPR009057 Homeodomain-like RD08_RS12170 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12170 IPR012337 Ribonuclease H-like domain RD08_RS12170 IPR024967 DNA-binding domain, IS481-type RD08_RS12175 IPR008217 Domain of unknown function DUF125, transmembrane RD08_RS12180 IPR003736 Phenylacetic acid degradation-related domain RD08_RS12180 IPR006683 Thioesterase superfamily RD08_RS12180 IPR029069 HotDog domain RD08_RS12185 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD08_RS12185 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD08_RS12185 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS12185 IPR011548 3-hydroxyisobutyrate dehydrogenase RD08_RS12185 IPR013328 Dehydrogenase, multihelical RD08_RS12185 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD08_RS12185 IPR016040 NAD(P)-binding domain RD08_RS12185 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD08_RS12190 IPR029045 ClpP/crotonase-like domain RD08_RS12190 IPR032259 RD08_RS12190 RD08_RS12195 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS12195 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS12195 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS12195 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS12195 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS12200 IPR005346 RnfH protein RD08_RS12200 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD08_RS12205 IPR005031 Streptomyces cyclase/dehydrase RD08_RS12205 IPR023393 START-like domain RD08_RS12210 IPR001584 Integrase, catalytic core RD08_RS12210 IPR009057 Homeodomain-like RD08_RS12210 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12210 IPR012337 Ribonuclease H-like domain RD08_RS12210 IPR024967 DNA-binding domain, IS481-type RD08_RS12215 IPR000037 SsrA-binding protein RD08_RS12215 IPR020081 SsrA-binding protein, conserved site RD08_RS12215 IPR023620 Small protein B RD08_RS12220 IPR000160 GGDEF domain RD08_RS12220 IPR029787 Nucleotide cyclase RD08_RS12225 IPR001107 Band 7 protein RD08_RS12225 IPR001972 Stomatin family RD08_RS12225 IPR032435 RD08_RS12225 RD08_RS12230 IPR001584 Integrase, catalytic core RD08_RS12230 IPR009057 Homeodomain-like RD08_RS12230 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12230 IPR012337 Ribonuclease H-like domain RD08_RS12230 IPR024967 DNA-binding domain, IS481-type RD08_RS12235 IPR012340 Nucleic acid-binding, OB-fold RD08_RS12240 IPR017926 Glutamine amidotransferase RD08_RS12240 IPR029062 Class I glutamine amidotransferase-like RD08_RS12245 IPR000121 PEP-utilising enzyme, C-terminal RD08_RS12245 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RD08_RS12245 IPR006319 Phosphoenolpyruvate synthase RD08_RS12245 IPR008279 PEP-utilising enzyme, mobile domain RD08_RS12245 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS12245 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS12245 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS12245 IPR018274 PEP-utilising enzyme, active site RD08_RS12245 IPR023151 PEP-utilising enzyme, conserved site RD08_RS12250 IPR005177 Bifunctional kinase-pyrophosphorylase RD08_RS12250 IPR026530 Phosphoenolpyruvate synthase regulatory protein RD08_RS12255 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD08_RS12255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD08_RS12255 IPR029028 Alpha/beta knot methyltransferases RD08_RS12255 IPR029064 50S ribosomal protein L30e-like RD08_RS12260 IPR001352 Ribonuclease HII/HIII RD08_RS12260 IPR012337 Ribonuclease H-like domain RD08_RS12260 IPR022898 Ribonuclease HII RD08_RS12260 IPR024567 Ribonuclease HII/HIII domain RD08_RS12265 IPR003835 Glycosyl transferase, family 19 RD08_RS12270 IPR001451 Bacterial transferase hexapeptide repeat RD08_RS12270 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RD08_RS12270 IPR011004 Trimeric LpxA-like RD08_RS12270 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal RD08_RS12275 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RD08_RS12275 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RD08_RS12275 IPR029069 HotDog domain RD08_RS12280 IPR001451 Bacterial transferase hexapeptide repeat RD08_RS12280 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RD08_RS12280 IPR011004 Trimeric LpxA-like RD08_RS12280 IPR018357 Hexapeptide transferase, conserved site RD08_RS12280 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RD08_RS12285 IPR005632 Chaperone protein Skp RD08_RS12285 IPR024930 Skp domain RD08_RS12290 IPR000184 Bacterial surface antigen (D15) RD08_RS12290 IPR010827 Surface antigen variable number RD08_RS12290 IPR023707 Outer membrane protein assembly factor BamA RD08_RS12295 IPR001478 PDZ domain RD08_RS12295 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RD08_RS12295 IPR008915 Peptidase M50 RD08_RS12300 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD08_RS12300 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal RD08_RS12300 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal RD08_RS12300 IPR016040 NAD(P)-binding domain RD08_RS12300 IPR026877 DXP reductoisomerase C-terminal domain RD08_RS12305 IPR000374 Phosphatidate cytidylyltransferase RD08_RS12310 IPR001441 Decaprenyl diphosphate synthase-like RD08_RS12310 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RD08_RS12315 IPR002661 Ribosome recycling factor RD08_RS12315 IPR023584 Ribosome recycling factor domain RD08_RS12320 IPR001048 Aspartate/glutamate/uridylate kinase RD08_RS12320 IPR011817 Uridylate kinase RD08_RS12320 IPR015963 Uridylate kinase, bacteria RD08_RS12325 IPR001816 Translation elongation factor EFTs/EF1B RD08_RS12325 IPR009060 UBA-like RD08_RS12325 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RD08_RS12325 IPR018101 Translation elongation factor Ts, conserved site RD08_RS12330 IPR001865 Ribosomal protein S2 RD08_RS12330 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RD08_RS12330 IPR018130 Ribosomal protein S2, conserved site RD08_RS12330 IPR023591 Ribosomal protein S2, flavodoxin-like domain RD08_RS12335 IPR000994 Peptidase M24, structural domain RD08_RS12335 IPR001714 Peptidase M24, methionine aminopeptidase RD08_RS12335 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RD08_RS12340 IPR002934 Nucleotidyl transferase domain RD08_RS12340 IPR003607 HD/PDEase domain RD08_RS12340 IPR006674 HD domain RD08_RS12340 IPR010043 Protein-PII uridylyltransferase RD08_RS12340 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RD08_RS12345 IPR002771 Multiple antibiotic resistance (MarC)-related RD08_RS12350 IPR003752 Disulphide bond formation protein DsbB/BdbC RD08_RS12350 IPR023380 Disulphide bond formation protein DsbB-like domain RD08_RS12355 IPR000836 Phosphoribosyltransferase domain RD08_RS12355 IPR005854 Amidophosphoribosyl transferase RD08_RS12355 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS12355 IPR029057 Phosphoribosyltransferase-like RD08_RS12360 IPR003825 Colicin V production, CvpA RD08_RS12365 IPR007730 Sporulation-related domain RD08_RS12370 IPR001645 Folylpolyglutamate synthetase RD08_RS12370 IPR004101 Mur ligase, C-terminal RD08_RS12370 IPR013221 Mur ligase, central RD08_RS12370 IPR018109 Folylpolyglutamate synthetase, conserved site RD08_RS12375 IPR005186 Flagellar protein FlaG protein RD08_RS12380 IPR003481 Flagellar hook-associated protein 2, N-terminal RD08_RS12380 IPR010809 Flagellar hook-associated 2, C-terminal RD08_RS12380 IPR010810 Flagellin hook, IN motif RD08_RS12385 IPR003713 Flagellar protein FliS RD08_RS12390 IPR008622 Flagellar protein FliT RD08_RS12400 IPR021136 Flagellar hook-length control protein-like, C-terminal RD08_RS12405 IPR006135 Type III secretion system substrate exporter RD08_RS12405 IPR029025 Type III secretion system substrate exporter, C-terminal RD08_RS12415 IPR001624 Flagellar hook-basal body complex protein FliE RD08_RS12420 IPR000067 Flagellar M-ring protein FliF RD08_RS12420 IPR006182 Secretory protein YscJ/FliF RD08_RS12420 IPR013556 Flagellar M-ring C-terminal RD08_RS12425 IPR000090 Flagellar motor switch protein FliG RD08_RS12425 IPR011002 Flagellar motor switch protein FliG, alpha-helical RD08_RS12425 IPR023087 RD08_RS12425 RD08_RS12425 IPR028263 Flagellar motor switch protein FliG, N-terminal domain RD08_RS12425 IPR032779 RD08_RS12425 RD08_RS12430 IPR000563 Flagellar assembly protein FliH RD08_RS12430 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RD08_RS12435 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD08_RS12435 IPR003593 AAA+ ATPase domain RD08_RS12435 IPR005714 ATPase, type III secretion system, FliI/YscN RD08_RS12435 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD08_RS12435 IPR020005 Flagellar export ATPase FliI, clade 1 RD08_RS12435 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS12435 IPR032463 RD08_RS12435 RD08_RS12440 IPR012823 Flagellar export FliJ RD08_RS12440 IPR018006 Flagellar FliJ, proteobacteria RD08_RS12445 IPR021136 Flagellar hook-length control protein-like, C-terminal RD08_RS12450 IPR001584 Integrase, catalytic core RD08_RS12450 IPR009057 Homeodomain-like RD08_RS12450 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12450 IPR012337 Ribonuclease H-like domain RD08_RS12450 IPR024967 DNA-binding domain, IS481-type RD08_RS12460 IPR005503 Flagellar basal body-associated protein FliL RD08_RS12465 IPR001543 Surface presentation of antigen (SpoA) RD08_RS12465 IPR001689 Flagellar motor switch protein FliM RD08_RS12465 IPR028976 CheC-like domain RD08_RS12470 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb RD08_RS12470 IPR001543 Surface presentation of antigen (SpoA) RD08_RS12470 IPR012826 Flagellar motor switch FliN RD08_RS12475 IPR022781 Flagellar biosynthesis protein, FliO RD08_RS12480 IPR005837 Flagellar transport protein FliP RD08_RS12480 IPR005838 Type III secretion system inner membrane P protein RD08_RS12485 IPR002191 Bacterial export protein family 3 RD08_RS12485 IPR006305 Flagellar biosynthesis protein FliQ RD08_RS12490 IPR002010 Type III secretion system inner membrane R protein RD08_RS12490 IPR006303 Flagellar biosynthesis protein FliR RD08_RS12495 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS12495 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS12500 IPR000014 PAS domain RD08_RS12500 IPR001610 PAC motif RD08_RS12500 IPR003660 HAMP linker domain RD08_RS12500 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD08_RS12500 IPR004090 Chemotaxis methyl-accepting receptor RD08_RS12500 IPR013655 PAS fold-3 RD08_RS12505 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD08_RS12505 IPR003660 HAMP linker domain RD08_RS12505 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD08_RS12505 IPR004090 Chemotaxis methyl-accepting receptor RD08_RS12510 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD08_RS12510 IPR003660 HAMP linker domain RD08_RS12510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD08_RS12510 IPR004090 Chemotaxis methyl-accepting receptor RD08_RS12515 IPR001029 Flagellin, D0/D1 domain RD08_RS12515 IPR013384 Flagellar hook-associated protein 3 RD08_RS12520 IPR002371 Flagellar hook-associated protein, FlgK RD08_RS12520 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD08_RS12525 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RD08_RS12525 IPR013377 Flagellar rod assembly protein/muramidase FlgJ RD08_RS12525 IPR019301 Flagellar protein FlgJ, N-terminal RD08_RS12530 IPR001782 Flagellar P-ring protein RD08_RS12535 IPR000527 Flagellar L-ring protein RD08_RS12540 IPR001444 Flagellar basal body rod protein, N-terminal RD08_RS12540 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD08_RS12540 IPR012834 Flagellar basal-body rod FlgG RD08_RS12540 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD08_RS12545 IPR001444 Flagellar basal body rod protein, N-terminal RD08_RS12545 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD08_RS12545 IPR019776 Flagellar basal body rod protein, conserved site RD08_RS12545 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD08_RS12550 IPR001444 Flagellar basal body rod protein, N-terminal RD08_RS12550 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD08_RS12550 IPR011491 Flagellar basal body FlaE RD08_RS12550 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD08_RS12555 IPR005648 Flagellar hook capping protein RD08_RS12555 IPR025963 FlgD Tudor-like domain RD08_RS12555 IPR025965 FlgD Ig-like domain RD08_RS12560 IPR001444 Flagellar basal body rod protein, N-terminal RD08_RS12560 IPR006299 Flagellar basal-body rod protein FlgC RD08_RS12560 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD08_RS12560 IPR019776 Flagellar basal body rod protein, conserved site RD08_RS12565 IPR001444 Flagellar basal body rod protein, N-terminal RD08_RS12565 IPR006300 Flagellar basal-body rod protein FlgB RD08_RS12570 IPR013974 SAF domain RD08_RS12570 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RD08_RS12575 IPR007412 Anti-sigma-28 factor, FlgM RD08_RS12575 IPR031316 RD08_RS12575 RD08_RS12580 IPR007809 FlgN-like domain RD08_RS12585 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD08_RS12585 IPR003593 AAA+ ATPase domain RD08_RS12585 IPR020006 Signal-recognition particle (SRP)-type GTPase RD08_RS12585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS12595 IPR006135 Type III secretion system substrate exporter RD08_RS12595 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB RD08_RS12595 IPR029025 Type III secretion system substrate exporter, C-terminal RD08_RS12600 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS12600 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS12605 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS12605 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD08_RS12610 IPR000515 MetI-like domain RD08_RS12610 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS12615 IPR003439 ABC transporter-like RD08_RS12615 IPR003593 AAA+ ATPase domain RD08_RS12615 IPR017871 ABC transporter, conserved site RD08_RS12615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS12615 IPR030679 RD08_RS12615 RD08_RS12620 IPR001584 Integrase, catalytic core RD08_RS12620 IPR009057 Homeodomain-like RD08_RS12620 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12620 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12620 IPR012337 Ribonuclease H-like domain RD08_RS12620 IPR024967 DNA-binding domain, IS481-type RD08_RS12625 IPR003710 Ketopantoate reductase ApbA/PanE RD08_RS12625 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS12625 IPR013328 Dehydrogenase, multihelical RD08_RS12625 IPR013332 Ketopantoate reductase, N-terminal domain RD08_RS12625 IPR013752 Ketopantoate reductase, C-terminal domain RD08_RS12625 IPR016040 NAD(P)-binding domain RD08_RS12630 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD08_RS12630 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RD08_RS12630 IPR029017 Enolase N-terminal domain-like RD08_RS12630 IPR029065 Enolase C-terminal domain-like RD08_RS12635 IPR005064 Bordetella uptake gene RD08_RS12645 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD08_RS12645 IPR004431 3-isopropylmalate dehydratase, small subunit RD08_RS12645 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD08_RS12645 IPR015937 Aconitase/isopropylmalate dehydratase RD08_RS12650 IPR000843 Transcription regulator HTH, LacI RD08_RS12650 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12650 IPR028082 Periplasmic binding protein-like I RD08_RS12655 IPR005064 Bordetella uptake gene RD08_RS12660 IPR003673 CoA-transferase family III RD08_RS12660 IPR023606 CoA-transferase family III domain RD08_RS12665 IPR002020 Citrate synthase-like RD08_RS12665 IPR016142 Citrate synthase-like, large alpha subdomain RD08_RS12665 IPR016143 Citrate synthase-like, small alpha subdomain RD08_RS12670 IPR005064 Bordetella uptake gene RD08_RS12675 IPR003781 CoA-binding RD08_RS12675 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS12675 IPR016040 NAD(P)-binding domain RD08_RS12675 IPR016102 Succinyl-CoA synthetase-like RD08_RS12675 IPR032875 RD08_RS12675 RD08_RS12680 IPR000524 Transcription regulator HTH, GntR RD08_RS12680 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS12680 IPR011711 GntR, C-terminal RD08_RS12680 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12685 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD08_RS12685 IPR011206 Citrate lyase beta subunit-like RD08_RS12685 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS12690 IPR005025 NADPH-dependent FMN reductase-like RD08_RS12690 IPR029039 Flavoprotein-like RD08_RS12695 IPR000847 Transcription regulator HTH, LysR RD08_RS12695 IPR005119 LysR, substrate-binding RD08_RS12695 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12700 IPR012337 Ribonuclease H-like domain RD08_RS12700 IPR019993 RecB family nuclease, TM0106, putative RD08_RS12700 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS12705 IPR003991 Pertactin virulence factor family RD08_RS12705 IPR005546 Autotransporter beta-domain RD08_RS12705 IPR006315 Outer membrane autotransporter barrel RD08_RS12705 IPR011050 Pectin lyase fold/virulence factor RD08_RS12705 IPR012332 P22 tailspike C-terminal domain-like RD08_RS12715 IPR005149 Transcription regulator PadR N-terminal RD08_RS12715 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12720 IPR005135 Endonuclease/exonuclease/phosphatase RD08_RS12725 IPR001736 Phospholipase D/Transphosphatidylase RD08_RS12725 IPR025202 Phospholipase D-like domain RD08_RS12725 IPR030872 RD08_RS12725 RD08_RS12735 IPR001584 Integrase, catalytic core RD08_RS12735 IPR009057 Homeodomain-like RD08_RS12735 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12735 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12735 IPR012337 Ribonuclease H-like domain RD08_RS12735 IPR024967 DNA-binding domain, IS481-type RD08_RS12740 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RD08_RS12745 IPR021519 Protein of unknown function DUF3182 RD08_RS12750 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RD08_RS12750 IPR002471 Peptidase S9, serine active site RD08_RS12750 IPR029058 Alpha/Beta hydrolase fold RD08_RS12760 IPR001584 Integrase, catalytic core RD08_RS12760 IPR009057 Homeodomain-like RD08_RS12760 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12760 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12760 IPR012337 Ribonuclease H-like domain RD08_RS12760 IPR024967 DNA-binding domain, IS481-type RD08_RS12765 IPR017853 Glycoside hydrolase, superfamily RD08_RS12765 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S RD08_RS12770 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD08_RS12770 IPR013781 Glycoside hydrolase, catalytic domain RD08_RS12770 IPR015902 Glycoside hydrolase, family 13 RD08_RS12770 IPR017853 Glycoside hydrolase, superfamily RD08_RS12775 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD08_RS12775 IPR011009 Protein kinase-like domain RD08_RS12775 IPR012810 Trehalose synthase/alpha-amylase, N-terminal RD08_RS12775 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain RD08_RS12775 IPR013780 Glycosyl hydrolase, family 13, all-beta RD08_RS12775 IPR013781 Glycoside hydrolase, catalytic domain RD08_RS12775 IPR015902 Glycoside hydrolase, family 13 RD08_RS12775 IPR017853 Glycoside hydrolase, superfamily RD08_RS12775 IPR032091 RD08_RS12775 RD08_RS12780 IPR004193 Glycoside hydrolase, family 13, N-terminal RD08_RS12780 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD08_RS12780 IPR006048 Alpha-amylase, C-terminal all beta RD08_RS12780 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB RD08_RS12780 IPR013780 Glycosyl hydrolase, family 13, all-beta RD08_RS12780 IPR013781 Glycoside hydrolase, catalytic domain RD08_RS12780 IPR013783 Immunoglobulin-like fold RD08_RS12780 IPR014756 Immunoglobulin E-set RD08_RS12780 IPR015902 Glycoside hydrolase, family 13 RD08_RS12780 IPR017853 Glycoside hydrolase, superfamily RD08_RS12785 IPR004193 Glycoside hydrolase, family 13, N-terminal RD08_RS12785 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD08_RS12785 IPR011837 Glycogen debranching enzyme, GlgX type RD08_RS12785 IPR013780 Glycosyl hydrolase, family 13, all-beta RD08_RS12785 IPR013781 Glycoside hydrolase, catalytic domain RD08_RS12785 IPR013783 Immunoglobulin-like fold RD08_RS12785 IPR014756 Immunoglobulin E-set RD08_RS12785 IPR015902 Glycoside hydrolase, family 13 RD08_RS12785 IPR017853 Glycoside hydrolase, superfamily RD08_RS12790 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD08_RS12790 IPR012768 Malto-oligosyltrehalose trehalohydrolase RD08_RS12790 IPR013781 Glycoside hydrolase, catalytic domain RD08_RS12790 IPR013783 Immunoglobulin-like fold RD08_RS12790 IPR014756 Immunoglobulin E-set RD08_RS12790 IPR015902 Glycoside hydrolase, family 13 RD08_RS12790 IPR017853 Glycoside hydrolase, superfamily RD08_RS12790 IPR022567 Domain of unknown function DUF3459 RD08_RS12800 IPR003385 Glycoside hydrolase, family 77 RD08_RS12800 IPR013781 Glycoside hydrolase, catalytic domain RD08_RS12800 IPR017853 Glycoside hydrolase, superfamily RD08_RS12805 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD08_RS12805 IPR012767 Malto-oligosyltrehalose synthase RD08_RS12805 IPR013781 Glycoside hydrolase, catalytic domain RD08_RS12805 IPR013797 Maltooligosyl trehalose synthase, N-terminal RD08_RS12805 IPR015902 Glycoside hydrolase, family 13 RD08_RS12805 IPR017853 Glycoside hydrolase, superfamily RD08_RS12815 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase RD08_RS12815 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD08_RS12815 IPR023479 Pyridoxal kinase RD08_RS12815 IPR029056 Ribokinase-like RD08_RS12820 IPR001608 Alanine racemase, N-terminal RD08_RS12820 IPR011078 Uncharacterised protein family UPF0001 RD08_RS12820 IPR029066 PLP-binding barrel RD08_RS12825 IPR000524 Transcription regulator HTH, GntR RD08_RS12825 IPR004839 Aminotransferase, class I/classII RD08_RS12825 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12825 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS12825 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS12825 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS12840 IPR006015 Universal stress protein A RD08_RS12840 IPR006016 UspA RD08_RS12840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS12845 IPR001395 Aldo/keto reductase RD08_RS12845 IPR023210 NADP-dependent oxidoreductase domain RD08_RS12855 IPR001570 Peptidase M4, C-terminal RD08_RS12855 IPR013856 Peptidase M4 domain RD08_RS12855 IPR023612 Peptidase M4 RD08_RS12860 IPR032808 RD08_RS12860 RD08_RS12865 IPR024447 YXWGXW repeat RD08_RS12875 IPR001584 Integrase, catalytic core RD08_RS12875 IPR009057 Homeodomain-like RD08_RS12875 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12875 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS12875 IPR012337 Ribonuclease H-like domain RD08_RS12875 IPR024967 DNA-binding domain, IS481-type RD08_RS12880 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD08_RS12880 IPR012336 Thioredoxin-like fold RD08_RS12880 IPR024706 Peroxiredoxin, AhpC-type RD08_RS12885 IPR006659 Arsenate reductase RD08_RS12885 IPR006660 Arsenate reductase-like RD08_RS12885 IPR012336 Thioredoxin-like fold RD08_RS12890 IPR003673 CoA-transferase family III RD08_RS12890 IPR023606 CoA-transferase family III domain RD08_RS12895 IPR011990 Tetratricopeptide-like helical domain RD08_RS12900 IPR014917 Protein of unknown function DUF1800 RD08_RS12905 IPR010869 Protein of unknown function DUF1501 RD08_RS12910 IPR000889 Glutathione peroxidase RD08_RS12910 IPR012336 Thioredoxin-like fold RD08_RS12910 IPR029760 Glutathione peroxidase conserved site RD08_RS12915 IPR004045 Glutathione S-transferase, N-terminal RD08_RS12915 IPR004046 Glutathione S-transferase, C-terminal RD08_RS12915 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS12915 IPR012336 Thioredoxin-like fold RD08_RS12920 IPR000182 GNAT domain RD08_RS12920 IPR016181 Acyl-CoA N-acyltransferase RD08_RS12930 IPR004143 Biotin/lipoate A/B protein ligase RD08_RS12935 IPR021729 Domain of unknown function DUF3298 RD08_RS12945 IPR003817 Phosphatidylserine decarboxylase-related RD08_RS12945 IPR033177 RD08_RS12945 RD08_RS12945 IPR033178 RD08_RS12945 RD08_RS12950 IPR000262 FMN-dependent dehydrogenase RD08_RS12950 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD08_RS12950 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD08_RS12950 IPR013785 Aldolase-type TIM barrel RD08_RS12955 IPR004872 Lipoprotein NlpA family RD08_RS12960 IPR014914 RES RD08_RS12965 IPR011979 Conserved hypothetical protein CHP02293 RD08_RS12965 IPR024467 Domain of unknown function DUF2384 RD08_RS12970 IPR006696 Protein of unknown function DUF423 RD08_RS12980 IPR001584 Integrase, catalytic core RD08_RS12980 IPR009057 Homeodomain-like RD08_RS12980 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS12980 IPR012337 Ribonuclease H-like domain RD08_RS12980 IPR024967 DNA-binding domain, IS481-type RD08_RS12985 IPR010662 Putative hydrolase RBBP9/YdeN RD08_RS12985 IPR029058 Alpha/Beta hydrolase fold RD08_RS12990 IPR000709 Leu/Ile/Val-binding protein RD08_RS12990 IPR028081 Leucine-binding protein domain RD08_RS12990 IPR028082 Periplasmic binding protein-like I RD08_RS12995 IPR003439 ABC transporter-like RD08_RS12995 IPR003593 AAA+ ATPase domain RD08_RS12995 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS12995 IPR012340 Nucleic acid-binding, OB-fold RD08_RS12995 IPR013611 Transport-associated OB, type 2 RD08_RS12995 IPR017871 ABC transporter, conserved site RD08_RS12995 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13000 IPR000515 MetI-like domain RD08_RS13000 IPR030165 RD08_RS13000 RD08_RS13005 IPR000515 MetI-like domain RD08_RS13010 IPR006061 Bacterial extracellular solute-binding family 1, conserved site RD08_RS13015 IPR000304 Pyrroline-5-carboxylate reductase RD08_RS13015 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS13015 IPR016040 NAD(P)-binding domain RD08_RS13015 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RD08_RS13015 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RD08_RS13020 IPR003744 Protein of unknown function DUF165 RD08_RS13025 IPR001584 Integrase, catalytic core RD08_RS13025 IPR009057 Homeodomain-like RD08_RS13025 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13025 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13025 IPR012337 Ribonuclease H-like domain RD08_RS13025 IPR024967 DNA-binding domain, IS481-type RD08_RS13030 IPR000709 Leu/Ile/Val-binding protein RD08_RS13030 IPR028081 Leucine-binding protein domain RD08_RS13030 IPR028082 Periplasmic binding protein-like I RD08_RS13035 IPR001851 ABC transporter, permease RD08_RS13040 IPR001851 ABC transporter, permease RD08_RS13040 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RD08_RS13045 IPR003439 ABC transporter-like RD08_RS13045 IPR003593 AAA+ ATPase domain RD08_RS13045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13045 IPR032823 RD08_RS13045 RD08_RS13050 IPR003439 ABC transporter-like RD08_RS13050 IPR003593 AAA+ ATPase domain RD08_RS13050 IPR017871 ABC transporter, conserved site RD08_RS13050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13050 IPR030660 RD08_RS13050 RD08_RS13055 IPR001920 Asp/Glu racemase RD08_RS13055 IPR015942 Asp/Glu/hydantoin racemase RD08_RS13065 IPR004045 Glutathione S-transferase, N-terminal RD08_RS13065 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS13065 IPR012336 Thioredoxin-like fold RD08_RS13070 IPR000620 Drug/metabolite transporter RD08_RS13075 IPR001584 Integrase, catalytic core RD08_RS13075 IPR009057 Homeodomain-like RD08_RS13075 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13075 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13075 IPR012337 Ribonuclease H-like domain RD08_RS13075 IPR024967 DNA-binding domain, IS481-type RD08_RS13080 IPR007349 Domain of unknown function DUF418 RD08_RS13085 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RD08_RS13085 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RD08_RS13085 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RD08_RS13085 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RD08_RS13085 IPR013760 DNA topoisomerase, type IIA-like domain RD08_RS13085 IPR024946 Arginine repressor C-terminal-like domain RD08_RS13090 IPR025588 YcxB-like protein RD08_RS13095 IPR001241 DNA topoisomerase, type IIA RD08_RS13095 IPR002288 DNA gyrase B subunit, C-terminal RD08_RS13095 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS13095 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RD08_RS13095 IPR006171 Toprim domain RD08_RS13095 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RD08_RS13095 IPR013759 DNA topoisomerase, type IIA, central domain RD08_RS13095 IPR013760 DNA topoisomerase, type IIA-like domain RD08_RS13095 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS13095 IPR018522 DNA topoisomerase, type IIA, conserved site RD08_RS13095 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS13100 IPR005746 Thioredoxin RD08_RS13100 IPR012336 Thioredoxin-like fold RD08_RS13100 IPR013766 Thioredoxin domain RD08_RS13100 IPR017937 Thioredoxin, conserved site RD08_RS13105 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD08_RS13105 IPR003593 AAA+ ATPase domain RD08_RS13105 IPR004665 Transcription termination factor Rho RD08_RS13105 IPR011112 Rho termination factor, N-terminal RD08_RS13105 IPR011113 Rho termination factor, RNA-binding RD08_RS13105 IPR011129 Cold shock protein RD08_RS13105 IPR012340 Nucleic acid-binding, OB-fold RD08_RS13105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13115 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain RD08_RS13115 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RD08_RS13115 IPR023057 Glutamate-ammonia-ligase adenylyltransferase RD08_RS13120 IPR003828 Protein of unknown function DUF208 RD08_RS13125 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form RD08_RS13125 IPR005130 Serine dehydratase-like, alpha subunit RD08_RS13125 IPR005131 Serine dehydratase beta chain RD08_RS13125 IPR029009 Allosteric substrate binding domain RD08_RS13130 IPR003841 Sodium-dependent phosphate transport protein RD08_RS13130 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein RD08_RS13135 IPR002925 Dienelactone hydrolase RD08_RS13135 IPR029058 Alpha/Beta hydrolase fold RD08_RS13140 IPR003689 Zinc/iron permease RD08_RS13145 IPR001098 DNA-directed DNA polymerase, family A, palm domain RD08_RS13145 IPR002298 DNA polymerase A RD08_RS13145 IPR002421 5'-3' exonuclease, N-terminal RD08_RS13145 IPR002562 3'-5' exonuclease domain RD08_RS13145 IPR008918 Helix-hairpin-helix motif, class 2 RD08_RS13145 IPR012337 Ribonuclease H-like domain RD08_RS13145 IPR018320 DNA polymerase 1 RD08_RS13145 IPR019760 DNA-directed DNA polymerase, family A, conserved site RD08_RS13145 IPR020045 5'-3' exonuclease, C-terminal domain RD08_RS13145 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RD08_RS13145 IPR029060 PIN domain-like RD08_RS13150 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RD08_RS13150 IPR031100 RD08_RS13150 RD08_RS13155 IPR008992 Enterotoxin RD08_RS13160 IPR005138 Aerolysin/Pertussis toxin APT RD08_RS13160 IPR008992 Enterotoxin RD08_RS13160 IPR016187 C-type lectin fold RD08_RS13160 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD08_RS13165 IPR000640 Translation elongation factor EFG, V domain RD08_RS13165 IPR000795 Elongation factor, GTP-binding domain RD08_RS13165 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD08_RS13165 IPR005225 Small GTP-binding protein domain RD08_RS13165 IPR006298 GTP-binding protein TypA RD08_RS13165 IPR009000 Translation protein, beta-barrel domain RD08_RS13165 IPR009022 Elongation factor G, III-V domain RD08_RS13165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13165 IPR031157 RD08_RS13165 RD08_RS13170 IPR002501 Pseudouridine synthase II RD08_RS13170 IPR014780 tRNA pseudouridine synthase II, TruB RD08_RS13170 IPR020103 Pseudouridine synthase, catalytic domain RD08_RS13170 IPR032819 RD08_RS13170 RD08_RS13175 IPR000238 Ribosome-binding factor A RD08_RS13175 IPR015946 K homology domain-like, alpha/beta RD08_RS13175 IPR023799 Ribosome-binding factor A domain RD08_RS13180 IPR000178 Translation initiation factor aIF-2, bacterial-like RD08_RS13180 IPR005225 Small GTP-binding protein domain RD08_RS13180 IPR006847 Translation initiation factor IF-2, N-terminal RD08_RS13180 IPR009000 Translation protein, beta-barrel domain RD08_RS13180 IPR009061 DNA binding domain, putative RD08_RS13180 IPR013575 Initiation factor 2 associated domain, bacterial RD08_RS13180 IPR023115 Translation initiation factor IF- 2, domain 3 RD08_RS13180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13185 IPR003029 Ribosomal protein S1, RNA-binding domain RD08_RS13185 IPR009019 K homology domain, prokaryotic type RD08_RS13185 IPR010213 Transcription termination factor NusA RD08_RS13185 IPR010214 Transcription termination factor NusA, C-terminal duplication RD08_RS13185 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RD08_RS13185 IPR012340 Nucleic acid-binding, OB-fold RD08_RS13185 IPR013735 Transcription factor NusA, N-terminal RD08_RS13185 IPR015946 K homology domain-like, alpha/beta RD08_RS13185 IPR022967 RNA-binding domain, S1 RD08_RS13185 IPR025249 KH domain, NusA-like RD08_RS13185 IPR030842 RD08_RS13185 RD08_RS13190 IPR003728 Ribosome maturation factor RimP RD08_RS13190 IPR028989 Ribosome maturation factor RimP, N-terminal RD08_RS13190 IPR028998 Ribosome maturation factor RimP, C-terminal RD08_RS13195 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RD08_RS13195 IPR002942 RNA-binding S4 domain RD08_RS13195 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD08_RS13195 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RD08_RS13195 IPR020103 Pseudouridine synthase, catalytic domain RD08_RS13200 IPR005234 Chromosome segregation/condensation protein ScpB RD08_RS13200 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13210 IPR000847 Transcription regulator HTH, LysR RD08_RS13210 IPR005119 LysR, substrate-binding RD08_RS13210 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13215 IPR000415 Nitroreductase-like RD08_RS13215 IPR029479 Nitroreductase RD08_RS13220 IPR003495 CobW/HypB/UreG domain RD08_RS13220 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RD08_RS13220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13225 IPR011051 RmlC-like cupin domain RD08_RS13225 IPR014710 RmlC-like jelly roll fold RD08_RS13240 IPR004045 Glutathione S-transferase, N-terminal RD08_RS13240 IPR004046 Glutathione S-transferase, C-terminal RD08_RS13240 IPR005955 Maleylacetoacetate isomerase RD08_RS13240 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS13240 IPR012336 Thioredoxin-like fold RD08_RS13245 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RD08_RS13250 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RD08_RS13255 IPR001405 RadC protein RD08_RS13255 IPR010994 RuvA domain 2-like RD08_RS13255 IPR025657 RadC-like JAB domain RD08_RS13260 IPR007325 Kynurenine formamidase RD08_RS13260 IPR017484 Kynurenine formamidase, bacteria RD08_RS13265 IPR004981 Tryptophan 2,3-dioxygenase RD08_RS13265 IPR017485 Tryptophan 2,3-dioxygenase, bacterial RD08_RS13270 IPR002150 Ribosomal protein L31 RD08_RS13270 IPR027493 Ribosomal protein L31 type B RD08_RS13280 IPR002528 Multi antimicrobial extrusion protein RD08_RS13290 IPR002781 Transmembrane protein TauE like RD08_RS13295 IPR003593 AAA+ ATPase domain RD08_RS13295 IPR004504 DNA repair protein RadA RD08_RS13295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS13295 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS13295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13300 IPR002035 von Willebrand factor, type A RD08_RS13300 IPR021908 Protein of unknown function DUF3520 RD08_RS13300 IPR022156 Uncharacterised protein YfbK, N-terminal RD08_RS13305 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS13305 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13305 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD08_RS13305 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS13305 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS13305 IPR014284 RNA polymerase sigma-70 like domain RD08_RS13310 IPR001584 Integrase, catalytic core RD08_RS13310 IPR009057 Homeodomain-like RD08_RS13310 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13310 IPR012337 Ribonuclease H-like domain RD08_RS13310 IPR024967 DNA-binding domain, IS481-type RD08_RS13320 IPR002347 Glucose/ribitol dehydrogenase RD08_RS13320 IPR016040 NAD(P)-binding domain RD08_RS13325 IPR000821 Alanine racemase RD08_RS13325 IPR001608 Alanine racemase, N-terminal RD08_RS13325 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD08_RS13325 IPR011079 Alanine racemase, C-terminal RD08_RS13325 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RD08_RS13325 IPR029066 PLP-binding barrel RD08_RS13330 IPR002060 Squalene/phytoene synthase RD08_RS13330 IPR008949 Terpenoid synthase RD08_RS13330 IPR017827 Squalene synthase HpnC RD08_RS13335 IPR002060 Squalene/phytoene synthase RD08_RS13335 IPR008949 Terpenoid synthase RD08_RS13335 IPR017828 Squalene/phytoene synthase HpnD RD08_RS13335 IPR019845 Squalene/phytoene synthase, conserved site RD08_RS13340 IPR002937 Amine oxidase RD08_RS13340 IPR017830 Squalene-associated FAD-dependent desaturase RD08_RS13340 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS13345 IPR003691 Putative fluoride ion transporter CrcB RD08_RS13350 IPR005325 Protein of unknown function DUF308, membrane RD08_RS13355 IPR000412 ABC-2 transporter RD08_RS13355 IPR005981 ABC-2 type transporter, NodJ RD08_RS13355 IPR013525 ABC-2 type transporter RD08_RS13360 IPR003439 ABC transporter-like RD08_RS13360 IPR003593 AAA+ ATPase domain RD08_RS13360 IPR017871 ABC transporter, conserved site RD08_RS13360 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13365 IPR032307 RD08_RS13365 RD08_RS13370 IPR014469 Protein of unknown function DUF2271 RD08_RS13375 IPR019613 Protein of unknown function DUF4198 RD08_RS13380 IPR003374 ApbE-like domain RD08_RS13380 IPR024932 Flavin transferase ApbE RD08_RS13385 IPR001094 Flavodoxin RD08_RS13385 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS13385 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD08_RS13385 IPR008254 Flavodoxin/nitric oxide synthase RD08_RS13385 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS13385 IPR029039 Flavoprotein-like RD08_RS13390 IPR005064 Bordetella uptake gene RD08_RS13395 IPR011059 Metal-dependent hydrolase, composite domain RD08_RS13395 IPR013108 Amidohydrolase 3 RD08_RS13395 IPR023100 D-aminoacylase, insert domain RD08_RS13395 IPR032466 RD08_RS13395 RD08_RS13400 IPR000847 Transcription regulator HTH, LysR RD08_RS13400 IPR005119 LysR, substrate-binding RD08_RS13400 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13405 IPR019587 Polyketide cyclase/dehydrase RD08_RS13405 IPR023393 START-like domain RD08_RS13410 IPR009215 TIM-barrel domain, IGPS-like RD08_RS13410 IPR013785 Aldolase-type TIM barrel RD08_RS13410 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS13415 IPR008322 Uncharacterised protein family UPF0261 RD08_RS13420 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS13420 IPR009057 Homeodomain-like RD08_RS13420 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS13420 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD08_RS13425 IPR003991 Pertactin virulence factor family RD08_RS13425 IPR005546 Autotransporter beta-domain RD08_RS13425 IPR006315 Outer membrane autotransporter barrel RD08_RS13430 IPR003991 Pertactin virulence factor family RD08_RS13430 IPR005546 Autotransporter beta-domain RD08_RS13430 IPR006315 Outer membrane autotransporter barrel RD08_RS13435 IPR001584 Integrase, catalytic core RD08_RS13435 IPR009057 Homeodomain-like RD08_RS13435 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13435 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13435 IPR012337 Ribonuclease H-like domain RD08_RS13435 IPR024967 DNA-binding domain, IS481-type RD08_RS13440 IPR001270 ClpA/B family RD08_RS13440 IPR003593 AAA+ ATPase domain RD08_RS13440 IPR003959 ATPase, AAA-type, core RD08_RS13440 IPR004176 Clp, N-terminal RD08_RS13440 IPR017730 Chaperonin ClpB RD08_RS13440 IPR018368 ClpA/B, conserved site 1 RD08_RS13440 IPR019489 Clp ATPase, C-terminal RD08_RS13440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13440 IPR028299 ClpA/B, conserved site 2 RD08_RS13445 IPR000595 Cyclic nucleotide-binding domain RD08_RS13445 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13445 IPR012318 Helix-turn-helix motif, Crp-type RD08_RS13445 IPR014710 RmlC-like jelly roll fold RD08_RS13445 IPR018335 Transcription regulator HTH, Crp-type, conserved site RD08_RS13445 IPR018490 Cyclic nucleotide-binding-like RD08_RS13450 IPR029058 Alpha/Beta hydrolase fold RD08_RS13455 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS13455 IPR012675 Beta-grasp domain RD08_RS13460 IPR000086 NUDIX hydrolase domain RD08_RS13460 IPR015797 NUDIX hydrolase domain-like RD08_RS13460 IPR020084 NUDIX hydrolase, conserved site RD08_RS13465 IPR024530 Protein of unknown function DUF3820 RD08_RS13475 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS13475 IPR009959 Polyketide cyclase SnoaL-like domain RD08_RS13475 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13475 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD08_RS13475 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS13475 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS13475 IPR014284 RNA polymerase sigma-70 like domain RD08_RS13475 IPR032710 RD08_RS13475 RD08_RS13480 IPR003779 Carboxymuconolactone decarboxylase-like RD08_RS13480 IPR004675 Alkylhydroperoxidase AhpD core RD08_RS13480 IPR029032 AhpD-like RD08_RS13485 IPR007298 Copper resistance lipoprotein NlpE RD08_RS13490 IPR019180 Oxidoreductase-like, N-terminal RD08_RS13505 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase RD08_RS13510 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD08_RS13510 IPR004839 Aminotransferase, class I/classII RD08_RS13510 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS13510 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS13510 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS13515 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS13515 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD08_RS13520 IPR000515 MetI-like domain RD08_RS13520 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS13525 IPR000515 MetI-like domain RD08_RS13525 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS13530 IPR003439 ABC transporter-like RD08_RS13530 IPR003593 AAA+ ATPase domain RD08_RS13530 IPR017871 ABC transporter, conserved site RD08_RS13530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13530 IPR030679 RD08_RS13530 RD08_RS13535 IPR000847 Transcription regulator HTH, LysR RD08_RS13535 IPR005119 LysR, substrate-binding RD08_RS13535 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13540 IPR000620 Drug/metabolite transporter RD08_RS13545 IPR001584 Integrase, catalytic core RD08_RS13545 IPR009057 Homeodomain-like RD08_RS13545 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13545 IPR012337 Ribonuclease H-like domain RD08_RS13545 IPR024967 DNA-binding domain, IS481-type RD08_RS13550 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD08_RS13555 IPR005220 Viral OB-fold, YgiW RD08_RS13570 IPR009569 Amino acid synthesis, putative RD08_RS13575 IPR005064 Bordetella uptake gene RD08_RS13580 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD08_RS13580 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS13580 IPR013328 Dehydrogenase, multihelical RD08_RS13580 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD08_RS13580 IPR016040 NAD(P)-binding domain RD08_RS13580 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD08_RS13585 IPR000847 Transcription regulator HTH, LysR RD08_RS13585 IPR005119 LysR, substrate-binding RD08_RS13585 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13590 IPR001303 Class II aldolase/adducin N-terminal RD08_RS13595 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RD08_RS13595 IPR027461 LD-carboxypeptidase A, C-terminal domain RD08_RS13595 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RD08_RS13595 IPR029062 Class I glutamine amidotransferase-like RD08_RS13605 IPR001734 Sodium/solute symporter RD08_RS13605 IPR031155 RD08_RS13605 RD08_RS13610 IPR011701 Major facilitator superfamily RD08_RS13610 IPR020846 Major facilitator superfamily domain RD08_RS13615 IPR002347 Glucose/ribitol dehydrogenase RD08_RS13615 IPR016040 NAD(P)-binding domain RD08_RS13620 IPR000847 Transcription regulator HTH, LysR RD08_RS13620 IPR005119 LysR, substrate-binding RD08_RS13620 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13625 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD08_RS13625 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RD08_RS13625 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RD08_RS13625 IPR029017 Enolase N-terminal domain-like RD08_RS13625 IPR029065 Enolase C-terminal domain-like RD08_RS13630 IPR005064 Bordetella uptake gene RD08_RS13635 IPR006680 Amidohydrolase 1 RD08_RS13635 IPR032466 RD08_RS13635 RD08_RS13640 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD08_RS13640 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS13645 IPR001584 Integrase, catalytic core RD08_RS13645 IPR009057 Homeodomain-like RD08_RS13645 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13645 IPR012337 Ribonuclease H-like domain RD08_RS13645 IPR024967 DNA-binding domain, IS481-type RD08_RS13650 IPR003719 Phenazine biosynthesis PhzF protein RD08_RS13655 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD08_RS13660 IPR004923 Iron permease FTR1/Fip1/EfeU RD08_RS13665 IPR008972 Cupredoxin RD08_RS13665 IPR028096 EfeO-type cupredoxin-like domain RD08_RS13670 IPR018470 Periplasmic metal-binding protein Tp34-type RD08_RS13675 IPR007897 PHB accumulation regulatory RD08_RS13675 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RD08_RS13675 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RD08_RS13680 IPR002347 Glucose/ribitol dehydrogenase RD08_RS13680 IPR011283 Acetoacetyl-CoA reductase RD08_RS13680 IPR016040 NAD(P)-binding domain RD08_RS13680 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS13685 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain RD08_RS13685 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I RD08_RS13685 IPR029058 Alpha/Beta hydrolase fold RD08_RS13690 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RD08_RS13690 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD08_RS13695 IPR002942 RNA-binding S4 domain RD08_RS13695 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD08_RS13695 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RD08_RS13695 IPR006225 Pseudouridine synthase, RluC/RluD RD08_RS13695 IPR020103 Pseudouridine synthase, catalytic domain RD08_RS13700 IPR011990 Tetratricopeptide-like helical domain RD08_RS13700 IPR017689 Outer membrane protein assembly factor BamD RD08_RS13705 IPR006555 ATP-dependent helicase, C-terminal RD08_RS13705 IPR010614 DEAD2 RD08_RS13705 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13710 IPR003029 Ribosomal protein S1, RNA-binding domain RD08_RS13710 IPR006641 YqgF/RNase H-like domain RD08_RS13710 IPR010994 RuvA domain 2-like RD08_RS13710 IPR012337 Ribonuclease H-like domain RD08_RS13710 IPR012340 Nucleic acid-binding, OB-fold RD08_RS13710 IPR018974 Tex-like protein, N-terminal RD08_RS13710 IPR022967 RNA-binding domain, S1 RD08_RS13710 IPR023097 Tex RuvX-like domain RD08_RS13710 IPR023319 Tex-like protein, HTH domain RD08_RS13710 IPR023323 Tex-like domain RD08_RS13710 IPR032639 RD08_RS13710 RD08_RS13715 IPR002305 Aminoacyl-tRNA synthetase, class Ic RD08_RS13715 IPR002306 Tryptophan-tRNA ligase RD08_RS13715 IPR010879 Domain of unknown function DUF1508 RD08_RS13715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS13715 IPR024109 Tryptophan-tRNA ligase, bacterial-type RD08_RS13720 IPR010921 Trp repressor/replication initiator RD08_RS13720 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13720 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13720 IPR012337 Ribonuclease H-like domain RD08_RS13720 IPR024967 DNA-binding domain, IS481-type RD08_RS13725 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD08_RS13730 IPR002347 Glucose/ribitol dehydrogenase RD08_RS13730 IPR016040 NAD(P)-binding domain RD08_RS13730 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS13735 IPR005064 Bordetella uptake gene RD08_RS13740 IPR001584 Integrase, catalytic core RD08_RS13740 IPR009057 Homeodomain-like RD08_RS13740 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13740 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13740 IPR012337 Ribonuclease H-like domain RD08_RS13740 IPR024967 DNA-binding domain, IS481-type RD08_RS13745 IPR000847 Transcription regulator HTH, LysR RD08_RS13745 IPR005119 LysR, substrate-binding RD08_RS13745 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13750 IPR002347 Glucose/ribitol dehydrogenase RD08_RS13750 IPR016040 NAD(P)-binding domain RD08_RS13755 IPR005654 ATPase, AFG1-like RD08_RS13755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13760 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD08_RS13760 IPR006258 Dihydrolipoamide dehydrogenase RD08_RS13760 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD08_RS13760 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS13765 IPR000089 Biotin/lipoyl attachment RD08_RS13765 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD08_RS13765 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD08_RS13765 IPR004167 E3 binding RD08_RS13765 IPR006255 Dihydrolipoamide succinyltransferase RD08_RS13765 IPR011053 Single hybrid motif RD08_RS13765 IPR023213 Chloramphenicol acetyltransferase-like domain RD08_RS13770 IPR001017 Dehydrogenase, E1 component RD08_RS13770 IPR005475 Transketolase-like, pyrimidine-binding domain RD08_RS13770 IPR011603 2-oxoglutarate dehydrogenase E1 component RD08_RS13770 IPR029061 Thiamin diphosphate-binding fold RD08_RS13770 IPR031717 RD08_RS13770 RD08_RS13770 IPR032106 RD08_RS13770 RD08_RS13780 IPR004813 Oligopeptide transporter, OPT superfamily RD08_RS13780 IPR004814 Oligopeptide transporter HI_0561 RD08_RS13785 IPR000485 AsnC-type HTH domain RD08_RS13785 IPR011008 Dimeric alpha-beta barrel RD08_RS13785 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13785 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS13785 IPR019888 Transcription regulator AsnC-type RD08_RS13790 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type RD08_RS13790 IPR005474 Transketolase, N-terminal RD08_RS13790 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD08_RS13790 IPR017600 Alpha-ketoglutarate dehydrogenase RD08_RS13790 IPR029061 Thiamin diphosphate-binding fold RD08_RS13790 IPR033247 RD08_RS13790 RD08_RS13795 IPR002505 Phosphate acetyl/butaryl transferase RD08_RS13795 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD08_RS13795 IPR012301 Malic enzyme, N-terminal domain RD08_RS13795 IPR012302 Malic enzyme, NAD-binding RD08_RS13795 IPR016040 NAD(P)-binding domain RD08_RS13800 IPR000259 Fimbrial-type adhesion domain RD08_RS13800 IPR008966 Adhesion domain RD08_RS13805 IPR001584 Integrase, catalytic core RD08_RS13805 IPR009057 Homeodomain-like RD08_RS13805 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13805 IPR012337 Ribonuclease H-like domain RD08_RS13805 IPR024967 DNA-binding domain, IS481-type RD08_RS13810 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RD08_RS13810 IPR006358 Transcription elongation factor GreB RD08_RS13810 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RD08_RS13810 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RD08_RS13810 IPR023459 Transcription elongation factor GreA/GreB family RD08_RS13810 IPR028624 Transcription elongation factor GreA/GreB RD08_RS13815 IPR003141 Polymerase/histidinol phosphatase, N-terminal RD08_RS13815 IPR004013 PHP, C-terminal RD08_RS13815 IPR016195 Polymerase/histidinol phosphatase-like RD08_RS13820 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS13820 IPR029058 Alpha/Beta hydrolase fold RD08_RS13825 IPR001584 Integrase, catalytic core RD08_RS13825 IPR009057 Homeodomain-like RD08_RS13825 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13825 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13825 IPR012337 Ribonuclease H-like domain RD08_RS13825 IPR024967 DNA-binding domain, IS481-type RD08_RS13830 IPR004477 ComEC/Rec2-related protein RD08_RS13830 IPR025405 Domain of unknown function DUF4131 RD08_RS13835 IPR024519 Domain of unknown function DUF3442, intimin/invasin RD08_RS13845 IPR005546 Autotransporter beta-domain RD08_RS13845 IPR006315 Outer membrane autotransporter barrel RD08_RS13845 IPR011050 Pectin lyase fold/virulence factor RD08_RS13845 IPR012332 P22 tailspike C-terminal domain-like RD08_RS13850 IPR001130 TatD family RD08_RS13850 IPR018228 Deoxyribonuclease, TatD-related, conserved site RD08_RS13850 IPR032466 RD08_RS13850 RD08_RS13855 IPR003439 ABC transporter-like RD08_RS13855 IPR003593 AAA+ ATPase domain RD08_RS13855 IPR011924 Lipoprotein releasing system, ATP-binding protein RD08_RS13855 IPR017871 ABC transporter, conserved site RD08_RS13855 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13860 IPR003838 Permease FtsX-like RD08_RS13860 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family RD08_RS13860 IPR025857 MacB-like periplasmic core domain RD08_RS13870 IPR001667 DDH domain RD08_RS13870 IPR003156 DHHA1 domain RD08_RS13870 IPR004610 Bacterial RecJ exonuclease RD08_RS13875 IPR000352 Peptide chain release factor class I/class II RD08_RS13875 IPR004374 Peptide chain release factor 2 RD08_RS13875 IPR005139 Peptide chain release factor RD08_RS13875 IPR014720 Double-stranded RNA-binding domain RD08_RS13880 IPR002347 Glucose/ribitol dehydrogenase RD08_RS13880 IPR016040 NAD(P)-binding domain RD08_RS13885 IPR002313 Lysine-tRNA ligase, class II RD08_RS13885 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RD08_RS13885 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD08_RS13885 IPR012340 Nucleic acid-binding, OB-fold RD08_RS13885 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RD08_RS13885 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RD08_RS13895 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS13895 IPR009057 Homeodomain-like RD08_RS13895 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS13895 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS13895 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD08_RS13900 IPR000873 AMP-dependent synthetase/ligase RD08_RS13900 IPR020845 AMP-binding, conserved site RD08_RS13905 IPR003439 ABC transporter-like RD08_RS13905 IPR003593 AAA+ ATPase domain RD08_RS13905 IPR017871 ABC transporter, conserved site RD08_RS13905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13910 IPR028081 Leucine-binding protein domain RD08_RS13910 IPR028082 Periplasmic binding protein-like I RD08_RS13920 IPR001851 ABC transporter, permease RD08_RS13925 IPR003439 ABC transporter-like RD08_RS13925 IPR003593 AAA+ ATPase domain RD08_RS13925 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS13925 IPR032823 RD08_RS13925 RD08_RS13930 IPR001584 Integrase, catalytic core RD08_RS13930 IPR009057 Homeodomain-like RD08_RS13930 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13930 IPR012337 Ribonuclease H-like domain RD08_RS13930 IPR024967 DNA-binding domain, IS481-type RD08_RS13935 IPR000160 GGDEF domain RD08_RS13935 IPR001633 EAL domain RD08_RS13935 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS13935 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS13935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS13935 IPR029787 Nucleotide cyclase RD08_RS13940 IPR001789 Signal transduction response regulator, receiver domain RD08_RS13940 IPR001867 Signal transduction response regulator, C-terminal RD08_RS13940 IPR011006 CheY-like superfamily RD08_RS13940 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13940 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS13945 IPR003846 Uncharacterised protein family UPF0061 RD08_RS13950 IPR018643 Protein of unknown function DUF2069, membrane RD08_RS13955 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13955 IPR017039 Virulence factor BrkB RD08_RS13955 IPR023679 Uncharacterised protein family UPF0761, bacterial RD08_RS13960 IPR000644 CBS domain RD08_RS13965 IPR001584 Integrase, catalytic core RD08_RS13965 IPR009057 Homeodomain-like RD08_RS13965 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13965 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS13965 IPR012337 Ribonuclease H-like domain RD08_RS13965 IPR024967 DNA-binding domain, IS481-type RD08_RS13970 IPR001269 tRNA-dihydrouridine synthase RD08_RS13970 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN RD08_RS13970 IPR013785 Aldolase-type TIM barrel RD08_RS13970 IPR018517 tRNA-dihydrouridine synthase, conserved site RD08_RS13975 IPR002575 Aminoglycoside phosphotransferase RD08_RS13975 IPR005280 Homoserine kinase ThrB RD08_RS13975 IPR011009 Protein kinase-like domain RD08_RS13985 IPR018076 Type II secretion system F domain RD08_RS13990 IPR001584 Integrase, catalytic core RD08_RS13990 IPR009057 Homeodomain-like RD08_RS13990 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS13990 IPR012337 Ribonuclease H-like domain RD08_RS13990 IPR024967 DNA-binding domain, IS481-type RD08_RS13995 IPR001890 RNA-binding, CRM domain RD08_RS14000 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RD08_RS14000 IPR015507 Ribosomal RNA large subunit methyltransferase E RD08_RS14000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS14005 IPR000642 Peptidase M41 RD08_RS14005 IPR003593 AAA+ ATPase domain RD08_RS14005 IPR003959 ATPase, AAA-type, core RD08_RS14005 IPR003960 ATPase, AAA-type, conserved site RD08_RS14005 IPR005936 Peptidase, FtsH RD08_RS14005 IPR011546 Peptidase M41, FtsH extracellular RD08_RS14005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS14010 IPR000489 Pterin-binding RD08_RS14010 IPR006390 Dihydropteroate synthase RD08_RS14010 IPR011005 Dihydropteroate synthase-like RD08_RS14015 IPR005841 Alpha-D-phosphohexomutase superfamily RD08_RS14015 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD08_RS14015 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD08_RS14015 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD08_RS14015 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD08_RS14015 IPR006352 Phosphoglucosamine mutase RD08_RS14015 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD08_RS14015 IPR016066 Alpha-D-phosphohexomutase, conserved site RD08_RS14020 IPR016181 Acyl-CoA N-acyltransferase RD08_RS14025 IPR003695 Ppx/GppA phosphatase RD08_RS14025 IPR022371 Exopolyphosphatase RD08_RS14025 IPR030673 RD08_RS14025 RD08_RS14030 IPR003414 Polyphosphate kinase RD08_RS14030 IPR024953 Polyphosphate kinase middle domain RD08_RS14030 IPR025198 Polyphosphate kinase N-terminal domain RD08_RS14030 IPR025200 Polyphosphate kinase C-terminal domain RD08_RS14035 IPR005673 ABC transporter, phosphate-binding protein PstS RD08_RS14035 IPR024370 PBP domain RD08_RS14040 IPR000515 MetI-like domain RD08_RS14040 IPR011864 Phosphate ABC transporter, permease protein PstC RD08_RS14045 IPR000515 MetI-like domain RD08_RS14045 IPR005672 Phosphate transport system permease protein PstA RD08_RS14050 IPR003439 ABC transporter-like RD08_RS14050 IPR003593 AAA+ ATPase domain RD08_RS14050 IPR005670 Phosphate transport system permease protein 1 RD08_RS14050 IPR017871 ABC transporter, conserved site RD08_RS14050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS14060 IPR001584 Integrase, catalytic core RD08_RS14060 IPR009057 Homeodomain-like RD08_RS14060 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14060 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14060 IPR012337 Ribonuclease H-like domain RD08_RS14060 IPR024967 DNA-binding domain, IS481-type RD08_RS14065 IPR000468 Barstar (barnase inhibitor) RD08_RS14075 IPR002505 Phosphate acetyl/butaryl transferase RD08_RS14075 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD08_RS14075 IPR012301 Malic enzyme, N-terminal domain RD08_RS14075 IPR012302 Malic enzyme, NAD-binding RD08_RS14075 IPR016040 NAD(P)-binding domain RD08_RS14080 IPR016166 FAD-binding, type 2 RD08_RS14085 IPR004839 Aminotransferase, class I/classII RD08_RS14085 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS14085 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS14085 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS14090 IPR008258 Lytic transglycosylase-like SLT domain RD08_RS14090 IPR023346 Lysozyme-like domain RD08_RS14095 IPR002830 UbiD decarboxylyase family RD08_RS14095 IPR012349 FMN-binding split barrel RD08_RS14095 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RD08_RS14105 IPR009937 Protein of unknown function DUF1469 RD08_RS14110 IPR010279 Protein of unknown function DUF883, ElaB RD08_RS14120 IPR000878 Tetrapyrrole methylase RD08_RS14120 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RD08_RS14120 IPR006366 Uroporphyrin-III C-methyltransferase RD08_RS14120 IPR006367 Sirohaem synthase, N-terminal RD08_RS14120 IPR012409 Sirohaem synthase RD08_RS14120 IPR014776 Tetrapyrrole methylase, subdomain 2 RD08_RS14120 IPR014777 Tetrapyrrole methylase, subdomain 1 RD08_RS14120 IPR016040 NAD(P)-binding domain RD08_RS14120 IPR019478 Sirohaem synthase, dimerisation domain RD08_RS14120 IPR028281 Siroheme synthase, central domain RD08_RS14125 IPR003991 Pertactin virulence factor family RD08_RS14125 IPR003992 Pertactin RD08_RS14125 IPR004899 Pertactin, central region RD08_RS14125 IPR005546 Autotransporter beta-domain RD08_RS14125 IPR006315 Outer membrane autotransporter barrel RD08_RS14125 IPR011050 Pectin lyase fold/virulence factor RD08_RS14125 IPR012332 P22 tailspike C-terminal domain-like RD08_RS14130 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS14130 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS14135 IPR005765 Uracil phosphoribosyl transferase RD08_RS14135 IPR029057 Phosphoribosyltransferase-like RD08_RS14140 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C RD08_RS14140 IPR012338 Beta-lactamase/transpeptidase-like RD08_RS14145 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RD08_RS14150 IPR002616 tRNA-guanine(15) transglycosylase-like RD08_RS14150 IPR004803 Queuine tRNA-ribosyltransferase RD08_RS14155 IPR003849 Preprotein translocase YajC RD08_RS14160 IPR005791 Protein translocase subunit SecD RD08_RS14160 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD08_RS14160 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD08_RS14160 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD08_RS14160 IPR027398 SecD export protein N-terminal TM domain RD08_RS14165 IPR005665 Protein-export membrane protein SecF, bacterial RD08_RS14165 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD08_RS14165 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD08_RS14165 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD08_RS14170 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS14170 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS14180 IPR002792 TRAM domain RD08_RS14180 IPR005839 Methylthiotransferase RD08_RS14180 IPR006463 tRNA-i(6)A37 modification enzyme MiaB RD08_RS14180 IPR006638 Elongator protein 3/MiaB/NifB RD08_RS14180 IPR007197 Radical SAM RD08_RS14180 IPR013848 Methylthiotransferase, N-terminal RD08_RS14180 IPR020612 Methylthiotransferase, conserved site RD08_RS14180 IPR023404 Radical SAM, alpha/beta horseshoe RD08_RS14180 IPR023970 Methylthiotransferase/radical SAM-type protein RD08_RS14185 IPR003714 PhoH-like protein RD08_RS14185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS14190 IPR002036 Endoribonuclease YbeY RD08_RS14190 IPR020549 Endoribonuclease YbeY, conserved site RD08_RS14190 IPR023091 Metalloprotease catalytic domain, predicted RD08_RS14195 IPR000644 CBS domain RD08_RS14195 IPR005170 Transporter-associated domain RD08_RS14195 IPR016166 FAD-binding, type 2 RD08_RS14195 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS14200 IPR003010 Carbon-nitrogen hydrolase RD08_RS14200 IPR004563 Apolipoprotein N-acyltransferase RD08_RS14205 IPR001395 Aldo/keto reductase RD08_RS14205 IPR023210 NADP-dependent oxidoreductase domain RD08_RS14225 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS14225 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS14230 IPR007439 Chemotaxis phosphatase, CheZ RD08_RS14235 IPR001789 Signal transduction response regulator, receiver domain RD08_RS14235 IPR011006 CheY-like superfamily RD08_RS14240 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RD08_RS14240 IPR001789 Signal transduction response regulator, receiver domain RD08_RS14240 IPR008248 Signal transduction response regulator, chemotaxis, CheB RD08_RS14240 IPR011006 CheY-like superfamily RD08_RS14250 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD08_RS14250 IPR003660 HAMP linker domain RD08_RS14250 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD08_RS14250 IPR004090 Chemotaxis methyl-accepting receptor RD08_RS14255 IPR002545 CheW-like protein RD08_RS14260 IPR002545 CheW-like protein RD08_RS14260 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS14260 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS14260 IPR004105 Histidine kinase CheA-like, homodimeric domain RD08_RS14260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS14260 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RD08_RS14260 IPR015162 CheY binding RD08_RS14265 IPR001789 Signal transduction response regulator, receiver domain RD08_RS14265 IPR011006 CheY-like superfamily RD08_RS14270 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD08_RS14270 IPR025713 Motility protein B, N-terminal domain RD08_RS14275 IPR000540 Flagellar motor protein MotA, conserved site RD08_RS14275 IPR002898 MotA/TolQ/ExbB proton channel RD08_RS14275 IPR022522 Flagellar motor stator, MotA RD08_RS14280 IPR007944 Flagellar transcriptional activator FlhC RD08_RS14285 IPR023559 Flagellar transcriptional activator FlhD RD08_RS14290 IPR000943 RNA polymerase sigma-70 RD08_RS14290 IPR007624 RNA polymerase sigma-70 region 3 RD08_RS14290 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS14290 IPR007630 RNA polymerase sigma-70 region 4 RD08_RS14290 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14290 IPR012845 RNA polymerase sigma factor, FliA/WhiG RD08_RS14290 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS14290 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS14290 IPR014284 RNA polymerase sigma-70 like domain RD08_RS14290 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RD08_RS14290 IPR028617 RNA polymerase sigma factor FliA RD08_RS14295 IPR001584 Integrase, catalytic core RD08_RS14295 IPR009057 Homeodomain-like RD08_RS14295 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14295 IPR012337 Ribonuclease H-like domain RD08_RS14295 IPR024967 DNA-binding domain, IS481-type RD08_RS14300 IPR004368 Translation initiation factor IF-1 RD08_RS14300 IPR006196 RNA-binding domain, S1, IF1 type RD08_RS14300 IPR012340 Nucleic acid-binding, OB-fold RD08_RS14300 IPR022967 RNA-binding domain, S1 RD08_RS14310 IPR011055 Duplicated hybrid motif RD08_RS14310 IPR016047 Peptidase M23 RD08_RS14320 IPR001453 Molybdopterin binding domain RD08_RS14320 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD08_RS14330 IPR008407 Branched-chain amino acid transport, AzlD RD08_RS14330 IPR011606 Branched-chain amino acid transport, permease RD08_RS14340 IPR001623 DnaJ domain RD08_RS14340 IPR002939 Chaperone DnaJ, C-terminal RD08_RS14340 IPR008971 HSP40/DnaJ peptide-binding RD08_RS14345 IPR000182 GNAT domain RD08_RS14345 IPR016181 Acyl-CoA N-acyltransferase RD08_RS14350 IPR007837 DNA damage-inducible protein DinB RD08_RS14350 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RD08_RS14355 IPR001584 Integrase, catalytic core RD08_RS14355 IPR009057 Homeodomain-like RD08_RS14355 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14355 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14355 IPR012337 Ribonuclease H-like domain RD08_RS14355 IPR024967 DNA-binding domain, IS481-type RD08_RS14360 IPR004045 Glutathione S-transferase, N-terminal RD08_RS14360 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS14360 IPR012336 Thioredoxin-like fold RD08_RS14365 IPR024501 Protein of unknown function DUF3141 RD08_RS14365 IPR029058 Alpha/Beta hydrolase fold RD08_RS14370 IPR002505 Phosphate acetyl/butaryl transferase RD08_RS14370 IPR012147 Phosphate acetyl/butyryltransferase RD08_RS14375 IPR000890 Aliphatic acid kinase, short-chain RD08_RS14375 IPR004372 Acetate/Proprionate kinase RD08_RS14375 IPR023865 Aliphatic acid kinase, short-chain, conserved site RD08_RS14380 IPR002347 Glucose/ribitol dehydrogenase RD08_RS14380 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RD08_RS14380 IPR016040 NAD(P)-binding domain RD08_RS14385 IPR001576 Phosphoglycerate kinase RD08_RS14385 IPR015824 Phosphoglycerate kinase, N-terminal RD08_RS14385 IPR015901 Phosphoglycerate kinase, C-terminal RD08_RS14385 IPR015911 Phosphoglycerate kinase, conserved site RD08_RS14390 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RD08_RS14390 IPR016040 NAD(P)-binding domain RD08_RS14390 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RD08_RS14390 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RD08_RS14390 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RD08_RS14390 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RD08_RS14395 IPR005474 Transketolase, N-terminal RD08_RS14395 IPR005475 Transketolase-like, pyrimidine-binding domain RD08_RS14395 IPR005478 Transketolase, bacterial-like RD08_RS14395 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD08_RS14395 IPR029061 Thiamin diphosphate-binding fold RD08_RS14395 IPR033247 RD08_RS14395 RD08_RS14395 IPR033248 RD08_RS14395 RD08_RS14400 IPR006700 Ribosomal RNA small subunit methyltransferase E RD08_RS14400 IPR015947 PUA-like domain RD08_RS14400 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD08_RS14400 IPR029028 Alpha/beta knot methyltransferases RD08_RS14405 IPR001584 Integrase, catalytic core RD08_RS14405 IPR009057 Homeodomain-like RD08_RS14405 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14405 IPR012337 Ribonuclease H-like domain RD08_RS14405 IPR024967 DNA-binding domain, IS481-type RD08_RS14410 IPR001029 Flagellin, D0/D1 domain RD08_RS14410 IPR001492 Flagellin RD08_RS14415 IPR000089 Biotin/lipoyl attachment RD08_RS14415 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD08_RS14415 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD08_RS14415 IPR006258 Dihydrolipoamide dehydrogenase RD08_RS14415 IPR011053 Single hybrid motif RD08_RS14415 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD08_RS14415 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD08_RS14415 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS14420 IPR000089 Biotin/lipoyl attachment RD08_RS14420 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD08_RS14420 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD08_RS14420 IPR004167 E3 binding RD08_RS14420 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex RD08_RS14420 IPR011053 Single hybrid motif RD08_RS14420 IPR023213 Chloramphenicol acetyltransferase-like domain RD08_RS14425 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type RD08_RS14425 IPR005474 Transketolase, N-terminal RD08_RS14425 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD08_RS14425 IPR029061 Thiamin diphosphate-binding fold RD08_RS14425 IPR033247 RD08_RS14425 RD08_RS14430 IPR000014 PAS domain RD08_RS14430 IPR001610 PAC motif RD08_RS14430 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS14430 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS14430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS14430 IPR013656 PAS fold-4 RD08_RS14435 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS14435 IPR001789 Signal transduction response regulator, receiver domain RD08_RS14435 IPR011006 CheY-like superfamily RD08_RS14435 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14435 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS14440 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RD08_RS14440 IPR016040 NAD(P)-binding domain RD08_RS14440 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD08_RS14440 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD08_RS14440 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RD08_RS14445 IPR001567 Peptidase M3A/M3B RD08_RS14445 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RD08_RS14445 IPR024079 Metallopeptidase, catalytic domain RD08_RS14445 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RD08_RS14450 IPR003782 Copper chaperone SCO1/SenC RD08_RS14450 IPR012336 Thioredoxin-like fold RD08_RS14455 IPR007341 Transglycosylase-associated protein RD08_RS14460 IPR003423 Outer membrane efflux protein RD08_RS14460 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD08_RS14465 IPR001036 Acriflavin resistance protein RD08_RS14465 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RD08_RS14465 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD08_RS14475 IPR000847 Transcription regulator HTH, LysR RD08_RS14475 IPR005119 LysR, substrate-binding RD08_RS14475 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14480 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RD08_RS14480 IPR002942 RNA-binding S4 domain RD08_RS14480 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD08_RS14480 IPR020103 Pseudouridine synthase, catalytic domain RD08_RS14485 IPR007440 Chorismate--pyruvate lyase RD08_RS14485 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS14490 IPR011701 Major facilitator superfamily RD08_RS14490 IPR020846 Major facilitator superfamily domain RD08_RS14495 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS14495 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS14500 IPR001395 Aldo/keto reductase RD08_RS14500 IPR020471 Aldo/keto reductase subgroup RD08_RS14500 IPR023210 NADP-dependent oxidoreductase domain RD08_RS14505 IPR001584 Integrase, catalytic core RD08_RS14505 IPR009057 Homeodomain-like RD08_RS14505 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14505 IPR012337 Ribonuclease H-like domain RD08_RS14505 IPR024967 DNA-binding domain, IS481-type RD08_RS14510 IPR000086 NUDIX hydrolase domain RD08_RS14510 IPR015797 NUDIX hydrolase domain-like RD08_RS14515 IPR001857 Ribosomal protein L19 RD08_RS14515 IPR008991 Translation protein SH3-like domain RD08_RS14515 IPR018257 Ribosomal protein L19, conserved site RD08_RS14520 IPR000620 Drug/metabolite transporter RD08_RS14530 IPR006638 Elongator protein 3/MiaB/NifB RD08_RS14530 IPR007197 Radical SAM RD08_RS14530 IPR013785 Aldolase-type TIM barrel RD08_RS14540 IPR002500 Phosphoadenosine phosphosulphate reductase RD08_RS14540 IPR011784 Sulphate adenylyltransferase, small subunit RD08_RS14540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS14545 IPR002500 Phosphoadenosine phosphosulphate reductase RD08_RS14545 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase RD08_RS14545 IPR011798 Adenosine 5'-phosphosulphate reductase RD08_RS14545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS14550 IPR003439 ABC transporter-like RD08_RS14550 IPR003593 AAA+ ATPase domain RD08_RS14550 IPR005666 Sulphate transport system permease protein 1 RD08_RS14550 IPR008995 Molybdate/tungstate binding, C-terminal RD08_RS14550 IPR017871 ABC transporter, conserved site RD08_RS14550 IPR024765 TOBE-like domain RD08_RS14550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS14555 IPR000515 MetI-like domain RD08_RS14555 IPR005667 Sulphate ABC transporter permease protein 2 RD08_RS14555 IPR011866 Sulphate ABC transporter, permease protein CysW RD08_RS14560 IPR000515 MetI-like domain RD08_RS14560 IPR005667 Sulphate ABC transporter permease protein 2 RD08_RS14560 IPR011865 Sulphate ABC transporter, permease protein CysT RD08_RS14570 IPR000957 Sulphate/thiosulphate-binding, conserved site RD08_RS14570 IPR005669 Thiosulphate/Sulfate-binding protein RD08_RS14575 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD08_RS14575 IPR012336 Thioredoxin-like fold RD08_RS14575 IPR019479 Peroxiredoxin, C-terminal RD08_RS14575 IPR024706 Peroxiredoxin, AhpC-type RD08_RS14580 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS14580 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS14580 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS14580 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS14580 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RD08_RS14580 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RD08_RS14585 IPR001308 Electron transfer flavoprotein, alpha subunit RD08_RS14585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS14585 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RD08_RS14585 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RD08_RS14585 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site RD08_RS14585 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS14590 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site RD08_RS14590 IPR012255 Electron transfer flavoprotein, beta subunit RD08_RS14590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS14590 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RD08_RS14595 IPR000286 Histone deacetylase superfamily RD08_RS14595 IPR023801 Histone deacetylase domain RD08_RS14600 IPR011757 Lytic transglycosylase MltB RD08_RS14600 IPR023346 Lysozyme-like domain RD08_RS14600 IPR031304 RD08_RS14600 RD08_RS14605 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RD08_RS14605 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD08_RS14605 IPR005856 Cysteine synthase K/M RD08_RS14605 IPR005858 Cysteine synthase B RD08_RS14610 IPR001584 Integrase, catalytic core RD08_RS14610 IPR009057 Homeodomain-like RD08_RS14610 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14610 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14610 IPR012337 Ribonuclease H-like domain RD08_RS14610 IPR024967 DNA-binding domain, IS481-type RD08_RS14615 IPR010994 RuvA domain 2-like RD08_RS14620 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD08_RS14620 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase RD08_RS14620 IPR016040 NAD(P)-binding domain RD08_RS14625 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RD08_RS14625 IPR011611 Carbohydrate kinase PfkB RD08_RS14625 IPR011913 RfaE bifunctional protein, domain I RD08_RS14625 IPR029056 Ribokinase-like RD08_RS14630 IPR011990 Tetratricopeptide-like helical domain RD08_RS14630 IPR030865 RD08_RS14630 RD08_RS14635 IPR010445 Protein of unknown function DUF1049 RD08_RS14640 IPR000119 Histone-like bacterial DNA-binding protein RD08_RS14640 IPR005685 Integration host factor, beta subunit RD08_RS14640 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD08_RS14645 IPR000110 Ribosomal protein S1 RD08_RS14645 IPR003029 Ribosomal protein S1, RNA-binding domain RD08_RS14645 IPR012340 Nucleic acid-binding, OB-fold RD08_RS14645 IPR022967 RNA-binding domain, S1 RD08_RS14650 IPR003136 Cytidylate kinase RD08_RS14650 IPR011994 Cytidylate kinase domain RD08_RS14650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS14655 IPR001986 Enolpyruvate transferase domain RD08_RS14655 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RD08_RS14655 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RD08_RS14655 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RD08_RS14660 IPR003099 Prephenate dehydrogenase RD08_RS14660 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS14660 IPR016040 NAD(P)-binding domain RD08_RS14665 IPR001086 Prephenate dehydratase RD08_RS14665 IPR002701 Chorismate mutase RD08_RS14665 IPR002912 ACT domain RD08_RS14665 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RD08_RS14665 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain RD08_RS14665 IPR018528 Prephenate dehydratase, conserved site RD08_RS14665 IPR020822 Chorismate mutase, type II RD08_RS14670 IPR000192 Aminotransferase class V domain RD08_RS14670 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS14670 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS14670 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS14670 IPR022278 Phosphoserine aminotransferase RD08_RS14675 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RD08_RS14675 IPR005743 DNA gyrase, subunit A RD08_RS14675 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RD08_RS14675 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain RD08_RS14675 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RD08_RS14675 IPR013760 DNA topoisomerase, type IIA-like domain RD08_RS14675 IPR024946 Arginine repressor C-terminal-like domain RD08_RS14680 IPR006664 Outer membrane protein, bacterial RD08_RS14680 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD08_RS14680 IPR006690 Outer membrane protein, OmpA-like, conserved site RD08_RS14685 IPR010233 Ubiquinone biosynthesis O-methyltransferase RD08_RS14685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS14690 IPR006346 2-phosphoglycolate phosphatase, prokaryotic RD08_RS14690 IPR006439 HAD hydrolase, subfamily IA RD08_RS14690 IPR023198 Phosphoglycolate phosphatase, domain 2 RD08_RS14690 IPR023214 HAD-like domain RD08_RS14695 IPR011701 Major facilitator superfamily RD08_RS14695 IPR020846 Major facilitator superfamily domain RD08_RS14705 IPR012933 HicA mRNA interferase family RD08_RS14710 IPR001584 Integrase, catalytic core RD08_RS14710 IPR009057 Homeodomain-like RD08_RS14710 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14710 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14710 IPR012337 Ribonuclease H-like domain RD08_RS14710 IPR024967 DNA-binding domain, IS481-type RD08_RS14715 IPR031807 RD08_RS14715 RD08_RS14720 IPR000847 Transcription regulator HTH, LysR RD08_RS14720 IPR005119 LysR, substrate-binding RD08_RS14720 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14725 IPR005064 Bordetella uptake gene RD08_RS14730 IPR001584 Integrase, catalytic core RD08_RS14730 IPR009057 Homeodomain-like RD08_RS14730 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14730 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14730 IPR012337 Ribonuclease H-like domain RD08_RS14730 IPR024967 DNA-binding domain, IS481-type RD08_RS14735 IPR001126 DNA-repair protein, UmuC-like RD08_RS14735 IPR017961 DNA polymerase, Y-family, little finger domain RD08_RS14735 IPR022880 DNA polymerase IV RD08_RS14735 IPR024728 DNA polymerase type-Y, HhH motif RD08_RS14740 IPR003736 Phenylacetic acid degradation-related domain RD08_RS14740 IPR006683 Thioesterase superfamily RD08_RS14740 IPR029069 HotDog domain RD08_RS14745 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RD08_RS14745 IPR015943 WD40/YVTN repeat-like-containing domain RD08_RS14745 IPR029058 Alpha/Beta hydrolase fold RD08_RS14750 IPR001264 Glycosyl transferase, family 51 RD08_RS14750 IPR001460 Penicillin-binding protein, transpeptidase RD08_RS14750 IPR012338 Beta-lactamase/transpeptidase-like RD08_RS14750 IPR012340 Nucleic acid-binding, OB-fold RD08_RS14750 IPR023346 Lysozyme-like domain RD08_RS14750 IPR031376 RD08_RS14750 RD08_RS14755 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD08_RS14755 IPR029052 Metallo-dependent phosphatase-like RD08_RS14760 IPR005625 PepSY-associated TM helix RD08_RS14770 IPR001395 Aldo/keto reductase RD08_RS14770 IPR020471 Aldo/keto reductase subgroup RD08_RS14770 IPR023210 NADP-dependent oxidoreductase domain RD08_RS14775 IPR001395 Aldo/keto reductase RD08_RS14775 IPR018170 Aldo/keto reductase, conserved site RD08_RS14775 IPR020471 Aldo/keto reductase subgroup RD08_RS14775 IPR023210 NADP-dependent oxidoreductase domain RD08_RS14780 IPR003439 ABC transporter-like RD08_RS14780 IPR003593 AAA+ ATPase domain RD08_RS14780 IPR011527 ABC transporter type 1, transmembrane domain RD08_RS14780 IPR017871 ABC transporter, conserved site RD08_RS14780 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS14785 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS14790 IPR001584 Integrase, catalytic core RD08_RS14790 IPR009057 Homeodomain-like RD08_RS14790 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14790 IPR012337 Ribonuclease H-like domain RD08_RS14790 IPR024967 DNA-binding domain, IS481-type RD08_RS14805 IPR008928 Six-hairpin glycosidase-like RD08_RS14805 IPR012341 Six-hairpin glycosidase RD08_RS14820 IPR001584 Integrase, catalytic core RD08_RS14820 IPR009057 Homeodomain-like RD08_RS14820 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14820 IPR012337 Ribonuclease H-like domain RD08_RS14820 IPR024967 DNA-binding domain, IS481-type RD08_RS14825 IPR000022 Carboxyl transferase RD08_RS14825 IPR029045 ClpP/crotonase-like domain RD08_RS14830 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RD08_RS14830 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD08_RS14830 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD08_RS14830 IPR005482 Biotin carboxylase, C-terminal RD08_RS14830 IPR011054 Rudiment single hybrid motif RD08_RS14830 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS14830 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS14830 IPR016185 Pre-ATP-grasp domain RD08_RS14835 IPR000524 Transcription regulator HTH, GntR RD08_RS14835 IPR011663 UbiC transcription regulator-associated RD08_RS14835 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14835 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS14840 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD08_RS14840 IPR016040 NAD(P)-binding domain RD08_RS14845 IPR006680 Amidohydrolase 1 RD08_RS14845 IPR032466 RD08_RS14845 RD08_RS14850 IPR011008 Dimeric alpha-beta barrel RD08_RS14855 IPR000891 Pyruvate carboxyltransferase RD08_RS14855 IPR003379 Carboxylase, conserved domain RD08_RS14855 IPR013785 Aldolase-type TIM barrel RD08_RS14860 IPR000089 Biotin/lipoyl attachment RD08_RS14860 IPR001249 Acetyl-CoA biotin carboxyl carrier RD08_RS14860 IPR001882 Biotin-binding site RD08_RS14860 IPR011053 Single hybrid motif RD08_RS14865 IPR005656 MmgE/PrpD RD08_RS14870 IPR006674 HD domain RD08_RS14870 IPR029016 GAF domain-like RD08_RS14885 IPR003187 Phospholipase A1 RD08_RS14890 IPR009875 PilZ domain RD08_RS14890 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal RD08_RS14890 IPR012349 FMN-binding split barrel RD08_RS14890 IPR023787 Type III secretion system flagellar brake protein YcgR RD08_RS14895 IPR021747 Protein of unknown function DUF3313 RD08_RS14905 IPR008854 TPMT family RD08_RS14905 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification RD08_RS14905 IPR025835 Thiopurine S-methyltransferase RD08_RS14905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS14910 IPR003439 ABC transporter-like RD08_RS14910 IPR003593 AAA+ ATPase domain RD08_RS14910 IPR011527 ABC transporter type 1, transmembrane domain RD08_RS14910 IPR017871 ABC transporter, conserved site RD08_RS14910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS14915 IPR001584 Integrase, catalytic core RD08_RS14915 IPR009057 Homeodomain-like RD08_RS14915 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14915 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14915 IPR012337 Ribonuclease H-like domain RD08_RS14915 IPR024967 DNA-binding domain, IS481-type RD08_RS14920 IPR032692 RD08_RS14920 RD08_RS14925 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS14925 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS14925 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS14925 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD08_RS14925 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS14925 IPR029061 Thiamin diphosphate-binding fold RD08_RS14930 IPR004789 Acetolactate synthase, small subunit RD08_RS14930 IPR019455 Acetolactate synthase, small subunit, C-terminal RD08_RS14935 IPR000506 Acetohydroxy acid isomeroreductase C-terminal RD08_RS14935 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS14935 IPR013023 Acetohydroxy acid isomeroreductase RD08_RS14935 IPR013116 Acetohydroxy acid isomeroreductase, catalytic RD08_RS14935 IPR013328 Dehydrogenase, multihelical RD08_RS14935 IPR016040 NAD(P)-binding domain RD08_RS14935 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS14940 IPR000462 CDP-alcohol phosphatidyltransferase RD08_RS14940 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase RD08_RS14950 IPR000589 Ribosomal protein S15 RD08_RS14950 IPR005290 Ribosomal protein S15, bacterial-type RD08_RS14950 IPR009068 S15/NS1, RNA-binding RD08_RS14955 IPR001247 Exoribonuclease, phosphorolytic domain 1 RD08_RS14955 IPR003029 Ribosomal protein S1, RNA-binding domain RD08_RS14955 IPR004087 K Homology domain RD08_RS14955 IPR004088 K Homology domain, type 1 RD08_RS14955 IPR012162 Polyribonucleotide nucleotidyltransferase RD08_RS14955 IPR012340 Nucleic acid-binding, OB-fold RD08_RS14955 IPR015847 Exoribonuclease, phosphorolytic domain 2 RD08_RS14955 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RD08_RS14955 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS14955 IPR022967 RNA-binding domain, S1 RD08_RS14955 IPR027408 PNPase/RNase PH domain RD08_RS14965 IPR001584 Integrase, catalytic core RD08_RS14965 IPR009057 Homeodomain-like RD08_RS14965 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS14965 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS14965 IPR012337 Ribonuclease H-like domain RD08_RS14965 IPR024967 DNA-binding domain, IS481-type RD08_RS14970 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD08_RS14970 IPR005789 Threonine dehydratase, catabolic RD08_RS14975 IPR002716 PIN domain RD08_RS14985 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS14985 IPR011032 GroES (chaperonin 10)-like RD08_RS14985 IPR013149 Alcohol dehydrogenase, C-terminal RD08_RS14985 IPR013154 Alcohol dehydrogenase GroES-like RD08_RS14985 IPR014189 Quinone oxidoreductase PIG3 RD08_RS14985 IPR016040 NAD(P)-binding domain RD08_RS14985 IPR020843 Polyketide synthase, enoylreductase RD08_RS14990 IPR000652 Triosephosphate isomerase RD08_RS14990 IPR013785 Aldolase-type TIM barrel RD08_RS14990 IPR020861 Triosephosphate isomerase, active site RD08_RS14990 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RD08_RS14995 IPR004692 Preprotein translocase SecG subunit RD08_RS15005 IPR000060 BCCT transporter family RD08_RS15010 IPR005471 Transcription regulator IclR, N-terminal RD08_RS15010 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15010 IPR014757 Transcription regulator IclR, C-terminal RD08_RS15010 IPR029016 GAF domain-like RD08_RS15015 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD08_RS15015 IPR006395 Methylaspartate ammonia-lyase RD08_RS15015 IPR022662 Methylaspartate ammonia-lyase, C-terminal RD08_RS15015 IPR022665 Methylaspartate ammonia-lyase, N-terminal RD08_RS15015 IPR029017 Enolase N-terminal domain-like RD08_RS15015 IPR029065 Enolase C-terminal domain-like RD08_RS15020 IPR005064 Bordetella uptake gene RD08_RS15025 IPR005656 MmgE/PrpD RD08_RS15030 IPR008948 L-Aspartase-like RD08_RS15035 IPR000362 Fumarate lyase family RD08_RS15035 IPR008948 L-Aspartase-like RD08_RS15035 IPR009049 Argininosuccinate lyase RD08_RS15035 IPR022761 Fumarate lyase, N-terminal RD08_RS15035 IPR029419 Argininosuccinate lyase, C-terminal RD08_RS15040 IPR005064 Bordetella uptake gene RD08_RS15045 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS15045 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS15050 IPR002347 Glucose/ribitol dehydrogenase RD08_RS15050 IPR016040 NAD(P)-binding domain RD08_RS15055 IPR000847 Transcription regulator HTH, LysR RD08_RS15055 IPR005119 LysR, substrate-binding RD08_RS15055 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15060 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD08_RS15060 IPR006233 Cystathionine beta-lyase, bacterial RD08_RS15060 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS15060 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS15060 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS15065 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD08_RS15070 IPR005064 Bordetella uptake gene RD08_RS15075 IPR001763 Rhodanese-like domain RD08_RS15075 IPR011051 RmlC-like cupin domain RD08_RS15075 IPR014710 RmlC-like jelly roll fold RD08_RS15080 IPR005064 Bordetella uptake gene RD08_RS15085 IPR006076 FAD dependent oxidoreductase RD08_RS15085 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS15090 IPR003692 Hydantoinase B/oxoprolinase RD08_RS15095 IPR002821 Hydantoinase/oxoprolinase RD08_RS15095 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD08_RS15100 IPR005471 Transcription regulator IclR, N-terminal RD08_RS15100 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15100 IPR029016 GAF domain-like RD08_RS15105 IPR000923 Blue (type 1) copper domain RD08_RS15105 IPR008972 Cupredoxin RD08_RS15105 IPR014068 Azurin, proteobacteria RD08_RS15105 IPR028871 Blue (type 1) copper protein, binding site RD08_RS15110 IPR005149 Transcription regulator PadR N-terminal RD08_RS15110 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15115 IPR003423 Outer membrane efflux protein RD08_RS15115 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD08_RS15120 IPR001036 Acriflavin resistance protein RD08_RS15120 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD08_RS15125 IPR006143 RND efflux pump, membrane fusion protein RD08_RS15125 IPR032317 RD08_RS15125 RD08_RS15130 IPR002577 Helix-turn-helix, HxlR type RD08_RS15130 IPR003033 SCP2 sterol-binding domain RD08_RS15130 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15130 IPR029229 Alkyl sulfatase, C-terminal RD08_RS15135 IPR001584 Integrase, catalytic core RD08_RS15135 IPR009057 Homeodomain-like RD08_RS15135 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15135 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15135 IPR012337 Ribonuclease H-like domain RD08_RS15135 IPR024967 DNA-binding domain, IS481-type RD08_RS15140 IPR000060 BCCT transporter family RD08_RS15140 IPR018093 BCCT transporter, conserved site RD08_RS15145 IPR000847 Transcription regulator HTH, LysR RD08_RS15145 IPR005119 LysR, substrate-binding RD08_RS15145 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15150 IPR001206 Diacylglycerol kinase, catalytic domain RD08_RS15150 IPR016064 ATP-NAD kinase-like domain RD08_RS15155 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD08_RS15155 IPR029052 Metallo-dependent phosphatase-like RD08_RS15160 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RD08_RS15165 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD08_RS15165 IPR016040 NAD(P)-binding domain RD08_RS15170 IPR003736 Phenylacetic acid degradation-related domain RD08_RS15170 IPR006683 Thioesterase superfamily RD08_RS15170 IPR029069 HotDog domain RD08_RS15175 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS15175 IPR009057 Homeodomain-like RD08_RS15175 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS15180 IPR001584 Integrase, catalytic core RD08_RS15180 IPR009057 Homeodomain-like RD08_RS15180 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15180 IPR012337 Ribonuclease H-like domain RD08_RS15180 IPR024967 DNA-binding domain, IS481-type RD08_RS15185 IPR001702 Porin, Gram-negative type RD08_RS15185 IPR002299 Porin, Neisseria sp. type RD08_RS15185 IPR023614 Porin domain RD08_RS15190 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RD08_RS15190 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RD08_RS15195 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RD08_RS15195 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RD08_RS15200 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RD08_RS15200 IPR010218 NADH dehydrogenase, subunit C RD08_RS15200 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site RD08_RS15205 IPR001135 NADH-quinone oxidoreductase, subunit D RD08_RS15205 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RD08_RS15205 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RD08_RS15205 IPR029014 NiFe hydrogenase-like RD08_RS15210 IPR002023 NADH-quinone oxidoreductase subunit E-like RD08_RS15210 IPR012336 Thioredoxin-like fold RD08_RS15215 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RD08_RS15215 IPR011537 NADH ubiquinone oxidoreductase, F subunit RD08_RS15215 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit RD08_RS15215 IPR019554 Soluble ligand binding domain RD08_RS15215 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding RD08_RS15220 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RD08_RS15220 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS15220 IPR006656 Molybdopterin oxidoreductase RD08_RS15220 IPR006657 Molydopterin dinucleotide-binding domain RD08_RS15220 IPR009010 Aspartate decarboxylase-like domain RD08_RS15220 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RD08_RS15220 IPR012675 Beta-grasp domain RD08_RS15220 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RD08_RS15225 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RD08_RS15225 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RD08_RS15230 IPR010226 NADH-quinone oxidoreductase, chain I RD08_RS15230 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD08_RS15230 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS15235 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RD08_RS15240 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RD08_RS15245 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RD08_RS15245 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD08_RS15245 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RD08_RS15245 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RD08_RS15250 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD08_RS15250 IPR003918 NADH:ubiquinone oxidoreductase RD08_RS15250 IPR010227 NADH-quinone oxidoreductase, chain M/4 RD08_RS15255 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD08_RS15255 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RD08_RS15260 IPR016768 Uncharacterised conserved protein UCP019883, membrane RD08_RS15265 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS15265 IPR010105 TonB-dependent siderophore receptor RD08_RS15265 IPR012910 TonB-dependent receptor, plug RD08_RS15265 IPR030148 RD08_RS15265 RD08_RS15270 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS15270 IPR010105 TonB-dependent siderophore receptor RD08_RS15270 IPR012910 TonB-dependent receptor, plug RD08_RS15270 IPR030148 RD08_RS15270 RD08_RS15275 IPR000182 GNAT domain RD08_RS15275 IPR016181 Acyl-CoA N-acyltransferase RD08_RS15280 IPR002347 Glucose/ribitol dehydrogenase RD08_RS15280 IPR016040 NAD(P)-binding domain RD08_RS15280 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS15285 IPR000399 TPP-binding enzyme, conserved site RD08_RS15285 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS15285 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS15285 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS15285 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS15285 IPR029061 Thiamin diphosphate-binding fold RD08_RS15290 IPR005064 Bordetella uptake gene RD08_RS15295 IPR000847 Transcription regulator HTH, LysR RD08_RS15295 IPR005119 LysR, substrate-binding RD08_RS15295 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15300 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like RD08_RS15300 IPR023190 Phosphoserine phosphatase, domain 2 RD08_RS15300 IPR023214 HAD-like domain RD08_RS15300 IPR025138 Domain of unknown function DUF4072 RD08_RS15305 IPR001650 Helicase, C-terminal RD08_RS15305 IPR003711 CarD-like/TRCF domain RD08_RS15305 IPR004576 Transcription-repair coupling factor RD08_RS15305 IPR005118 Transcription-repair-coupling factor, C-terminal domain RD08_RS15305 IPR011545 DEAD/DEAH box helicase domain RD08_RS15305 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS15305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS15310 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD08_RS15310 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RD08_RS15310 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS15315 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RD08_RS15315 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RD08_RS15320 IPR001584 Integrase, catalytic core RD08_RS15320 IPR009057 Homeodomain-like RD08_RS15320 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15320 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15320 IPR012337 Ribonuclease H-like domain RD08_RS15320 IPR024967 DNA-binding domain, IS481-type RD08_RS15325 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase RD08_RS15325 IPR028343 Fructose-1,6-bisphosphatase RD08_RS15325 IPR033391 RD08_RS15325 RD08_RS15330 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RD08_RS15330 IPR012779 Peptidase M1, alanyl aminopeptidase RD08_RS15330 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal RD08_RS15330 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RD08_RS15335 IPR025411 Domain of unknown function DUF4136 RD08_RS15340 IPR001584 Integrase, catalytic core RD08_RS15340 IPR009057 Homeodomain-like RD08_RS15340 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15340 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15340 IPR012337 Ribonuclease H-like domain RD08_RS15340 IPR024967 DNA-binding domain, IS481-type RD08_RS15345 IPR006685 Mechanosensitive ion channel MscS RD08_RS15345 IPR010920 Like-Sm (LSM) domain RD08_RS15345 IPR011066 Mechanosensitive ion channel MscS, C-terminal RD08_RS15350 IPR000399 TPP-binding enzyme, conserved site RD08_RS15350 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS15350 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS15350 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS15350 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS15350 IPR029061 Thiamin diphosphate-binding fold RD08_RS15355 IPR025870 Glyoxalase-like domain RD08_RS15355 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS15360 IPR015168 SsuA/THI5-like RD08_RS15360 IPR027939 NMT1/THI5 family RD08_RS15365 IPR003439 ABC transporter-like RD08_RS15365 IPR003593 AAA+ ATPase domain RD08_RS15365 IPR017871 ABC transporter, conserved site RD08_RS15365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS15370 IPR000515 MetI-like domain RD08_RS15375 IPR021259 Protein of unknown function DUF2817 RD08_RS15380 IPR000873 AMP-dependent synthetase/ligase RD08_RS15380 IPR020845 AMP-binding, conserved site RD08_RS15380 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS15385 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS15385 IPR011032 GroES (chaperonin 10)-like RD08_RS15385 IPR013149 Alcohol dehydrogenase, C-terminal RD08_RS15385 IPR013154 Alcohol dehydrogenase GroES-like RD08_RS15385 IPR016040 NAD(P)-binding domain RD08_RS15385 IPR020843 Polyketide synthase, enoylreductase RD08_RS15390 IPR000524 Transcription regulator HTH, GntR RD08_RS15390 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS15390 IPR011711 GntR, C-terminal RD08_RS15390 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15395 IPR005546 Autotransporter beta-domain RD08_RS15395 IPR006315 Outer membrane autotransporter barrel RD08_RS15400 IPR000524 Transcription regulator HTH, GntR RD08_RS15400 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS15400 IPR011711 GntR, C-terminal RD08_RS15400 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15405 IPR000399 TPP-binding enzyme, conserved site RD08_RS15405 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS15405 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS15405 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS15405 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS15405 IPR029061 Thiamin diphosphate-binding fold RD08_RS15410 IPR002347 Glucose/ribitol dehydrogenase RD08_RS15410 IPR016040 NAD(P)-binding domain RD08_RS15415 IPR005064 Bordetella uptake gene RD08_RS15425 IPR001544 Aminotransferase, class IV RD08_RS15430 IPR003439 ABC transporter-like RD08_RS15430 IPR003593 AAA+ ATPase domain RD08_RS15430 IPR017871 ABC transporter, conserved site RD08_RS15430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS15430 IPR030206 RD08_RS15430 RD08_RS15430 IPR030679 RD08_RS15430 RD08_RS15435 IPR000515 MetI-like domain RD08_RS15435 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS15435 IPR030205 RD08_RS15435 RD08_RS15445 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS15450 IPR000847 Transcription regulator HTH, LysR RD08_RS15450 IPR005119 LysR, substrate-binding RD08_RS15450 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15455 IPR003423 Outer membrane efflux protein RD08_RS15455 IPR028351 Cyclolysin transport protein CyaE RD08_RS15460 IPR003997 RTX secretion protein D, Gram-negative bacteria RD08_RS15460 IPR006144 Secretion protein HlyD, conserved site RD08_RS15460 IPR010129 Type I secretion membrane fusion protein, HlyD RD08_RS15465 IPR003439 ABC transporter-like RD08_RS15465 IPR003593 AAA+ ATPase domain RD08_RS15465 IPR005074 Peptidase C39, bacteriocin processing RD08_RS15465 IPR010132 ATPase, type I secretion system, HlyB RD08_RS15465 IPR011527 ABC transporter type 1, transmembrane domain RD08_RS15465 IPR017871 ABC transporter, conserved site RD08_RS15465 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS15470 IPR001343 Haemolysin-type calcium-binding repeat RD08_RS15470 IPR003995 RTX toxin determinant A RD08_RS15470 IPR005165 Anthrax toxin, edema factor, central RD08_RS15470 IPR011049 Serralysin-like metalloprotease, C-terminal RD08_RS15470 IPR018504 RTX N-terminal RD08_RS15470 IPR018511 Hemolysin-type calcium-binding conserved site RD08_RS15480 IPR003996 RTX toxin-activating protein C, bacteria RD08_RS15485 IPR010102 Succinate semialdehyde dehydrogenase RD08_RS15485 IPR015590 Aldehyde dehydrogenase domain RD08_RS15485 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS15485 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS15485 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS15485 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS15485 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD08_RS15490 IPR001584 Integrase, catalytic core RD08_RS15490 IPR009057 Homeodomain-like RD08_RS15490 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15490 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15490 IPR012337 Ribonuclease H-like domain RD08_RS15490 IPR024967 DNA-binding domain, IS481-type RD08_RS15495 IPR006076 FAD dependent oxidoreductase RD08_RS15495 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS15500 IPR003692 Hydantoinase B/oxoprolinase RD08_RS15505 IPR002821 Hydantoinase/oxoprolinase RD08_RS15505 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD08_RS15510 IPR000847 Transcription regulator HTH, LysR RD08_RS15510 IPR005119 LysR, substrate-binding RD08_RS15510 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15520 IPR000092 Polyprenyl synthetase RD08_RS15520 IPR008949 Terpenoid synthase RD08_RS15520 IPR017446 Polyprenyl synthetase-related RD08_RS15525 IPR011234 Fumarylacetoacetase, C-terminal-related RD08_RS15530 IPR001787 Ribosomal protein L21 RD08_RS15530 IPR018258 Ribosomal protein L21, conserved site RD08_RS15530 IPR028909 Ribosomal protein L21-like RD08_RS15535 IPR001684 Ribosomal protein L27 RD08_RS15535 IPR018261 Ribosomal protein L27, conserved site RD08_RS15540 IPR006073 GTP binding domain RD08_RS15540 IPR006074 GTP1/OBG, conserved site RD08_RS15540 IPR006169 GTP1/OBG domain RD08_RS15540 IPR014100 GTP-binding protein Obg/CgtA RD08_RS15540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS15545 IPR001048 Aspartate/glutamate/uridylate kinase RD08_RS15545 IPR001057 Glutamate/acetylglutamate kinase RD08_RS15545 IPR002478 PUA domain RD08_RS15545 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase RD08_RS15545 IPR011529 Glutamate 5-kinase RD08_RS15545 IPR015947 PUA-like domain RD08_RS15545 IPR019797 Glutamate 5-kinase, conserved site RD08_RS15550 IPR001867 Signal transduction response regulator, C-terminal RD08_RS15550 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15550 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS15555 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS15555 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15560 IPR001584 Integrase, catalytic core RD08_RS15560 IPR009057 Homeodomain-like RD08_RS15560 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15560 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15560 IPR012337 Ribonuclease H-like domain RD08_RS15560 IPR024967 DNA-binding domain, IS481-type RD08_RS15565 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD08_RS15570 IPR009537 Domain of unknown function DUF1156 RD08_RS15570 IPR014455 DNA methylase, N-6 adenine-specific, MK1259 type RD08_RS15570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS15575 IPR001584 Integrase, catalytic core RD08_RS15575 IPR009057 Homeodomain-like RD08_RS15575 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15575 IPR012337 Ribonuclease H-like domain RD08_RS15575 IPR024967 DNA-binding domain, IS481-type RD08_RS15585 IPR006860 FecR protein RD08_RS15585 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD08_RS15585 IPR032623 RD08_RS15585 RD08_RS15590 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS15590 IPR010105 TonB-dependent siderophore receptor RD08_RS15590 IPR011662 Secretin/TonB, short N-terminal RD08_RS15590 IPR012910 TonB-dependent receptor, plug RD08_RS15595 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RD08_RS15605 IPR001584 Integrase, catalytic core RD08_RS15605 IPR009057 Homeodomain-like RD08_RS15605 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15605 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15605 IPR012337 Ribonuclease H-like domain RD08_RS15605 IPR024967 DNA-binding domain, IS481-type RD08_RS15610 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase RD08_RS15610 IPR016040 NAD(P)-binding domain RD08_RS15610 IPR032095 RD08_RS15610 RD08_RS15615 IPR005730 Carboxynorspermidine decarboxylase RD08_RS15615 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD08_RS15615 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RD08_RS15615 IPR029066 PLP-binding barrel RD08_RS15620 IPR001584 Integrase, catalytic core RD08_RS15620 IPR009057 Homeodomain-like RD08_RS15620 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15620 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15620 IPR012337 Ribonuclease H-like domain RD08_RS15620 IPR024967 DNA-binding domain, IS481-type RD08_RS15625 IPR009057 Homeodomain-like RD08_RS15625 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS15630 IPR005471 Transcription regulator IclR, N-terminal RD08_RS15630 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15630 IPR014757 Transcription regulator IclR, C-terminal RD08_RS15630 IPR029016 GAF domain-like RD08_RS15635 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS15635 IPR030678 RD08_RS15635 RD08_RS15640 IPR000515 MetI-like domain RD08_RS15645 IPR000515 MetI-like domain RD08_RS15650 IPR003439 ABC transporter-like RD08_RS15650 IPR003593 AAA+ ATPase domain RD08_RS15650 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS15650 IPR017871 ABC transporter, conserved site RD08_RS15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS15655 IPR000120 Amidase RD08_RS15655 IPR020556 Amidase, conserved site RD08_RS15655 IPR023631 Amidase signature domain RD08_RS15660 IPR005814 Aminotransferase class-III RD08_RS15660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS15660 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS15660 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS15665 IPR009409 Protein of unknown function DUF1059 RD08_RS15670 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS15675 IPR001584 Integrase, catalytic core RD08_RS15675 IPR009057 Homeodomain-like RD08_RS15675 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15675 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15675 IPR012337 Ribonuclease H-like domain RD08_RS15675 IPR024967 DNA-binding domain, IS481-type RD08_RS15680 IPR006664 Outer membrane protein, bacterial RD08_RS15680 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD08_RS15685 IPR001533 Transcriptional coactivator/pterin dehydratase RD08_RS15695 IPR005835 Nucleotidyl transferase RD08_RS15695 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS15700 IPR002575 Aminoglycoside phosphotransferase RD08_RS15700 IPR011009 Protein kinase-like domain RD08_RS15705 IPR007543 Organic solvent tolerance protein, C-terminal RD08_RS15705 IPR020889 Lipopolysaccharide assembly, LptD RD08_RS15710 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD08_RS15710 IPR015391 SurA N-terminal RD08_RS15710 IPR023034 Peptidyl-prolyl isomerase SurA RD08_RS15710 IPR027304 Trigger factor/SurA domain RD08_RS15715 IPR001737 Ribosomal RNA adenine methylase transferase RD08_RS15715 IPR011530 Ribosomal RNA adenine dimethylase RD08_RS15715 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RD08_RS15715 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RD08_RS15715 IPR023165 rRNA adenine dimethylase-like RD08_RS15715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS15720 IPR004381 Glycerate kinase RD08_RS15720 IPR018193 Glycerate kinase, flavodoxin-like domain RD08_RS15725 IPR001697 Pyruvate kinase RD08_RS15725 IPR011037 Pyruvate kinase-like, insert domain RD08_RS15725 IPR015793 Pyruvate kinase, barrel RD08_RS15725 IPR015794 Pyruvate kinase, alpha/beta RD08_RS15725 IPR015795 Pyruvate kinase, C-terminal RD08_RS15725 IPR015806 Pyruvate kinase, beta-barrel insert domain RD08_RS15725 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS15725 IPR018209 Pyruvate kinase, active site RD08_RS15730 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB RD08_RS15730 IPR011642 Nucleoside recognition Gate RD08_RS15735 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS15735 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS15735 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS15735 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS15735 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type RD08_RS15740 IPR001584 Integrase, catalytic core RD08_RS15740 IPR009057 Homeodomain-like RD08_RS15740 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15740 IPR012337 Ribonuclease H-like domain RD08_RS15740 IPR024967 DNA-binding domain, IS481-type RD08_RS15745 IPR000101 Gamma-glutamyltranspeptidase RD08_RS15745 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS15750 IPR005064 Bordetella uptake gene RD08_RS15755 IPR005064 Bordetella uptake gene RD08_RS15760 IPR003439 ABC transporter-like RD08_RS15760 IPR003593 AAA+ ATPase domain RD08_RS15760 IPR017871 ABC transporter, conserved site RD08_RS15760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS15765 IPR000522 ABC transporter, permease protein RD08_RS15765 IPR029022 ABC transporter, BtuC-like RD08_RS15770 IPR011990 Tetratricopeptide-like helical domain RD08_RS15770 IPR014162 Tol-Pal system, YbgF RD08_RS15770 IPR019734 Tetratricopeptide repeat RD08_RS15775 IPR006664 Outer membrane protein, bacterial RD08_RS15775 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD08_RS15775 IPR006690 Outer membrane protein, OmpA-like, conserved site RD08_RS15775 IPR014169 Peptidoglycan-associated lipoprotein RD08_RS15780 IPR007195 TolB, N-terminal RD08_RS15780 IPR011659 WD40-like Beta Propeller RD08_RS15780 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB RD08_RS15780 IPR015943 WD40/YVTN repeat-like-containing domain RD08_RS15785 IPR006260 TonB, C-terminal RD08_RS15785 IPR014161 Tol-Pal system, TolA RD08_RS15790 IPR003400 Biopolymer transport protein ExbD/TolR RD08_RS15790 IPR014168 Biopolymer transport, TolR RD08_RS15795 IPR002898 MotA/TolQ/ExbB proton channel RD08_RS15795 IPR014163 Tol-Pal system, TolQ RD08_RS15800 IPR006683 Thioesterase superfamily RD08_RS15800 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family RD08_RS15800 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase RD08_RS15800 IPR029069 HotDog domain RD08_RS15805 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD08_RS15805 IPR002316 Proline-tRNA ligase, class IIa RD08_RS15805 IPR004154 Anticodon-binding RD08_RS15805 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RD08_RS15805 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RD08_RS15805 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RD08_RS15810 IPR000086 NUDIX hydrolase domain RD08_RS15810 IPR015797 NUDIX hydrolase domain-like RD08_RS15810 IPR020084 NUDIX hydrolase, conserved site RD08_RS15810 IPR020476 NUDIX hydrolase RD08_RS15810 IPR022927 RNA pyrophosphohydrolase RppH RD08_RS15815 IPR001789 Signal transduction response regulator, receiver domain RD08_RS15815 IPR001867 Signal transduction response regulator, C-terminal RD08_RS15815 IPR011006 CheY-like superfamily RD08_RS15815 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15820 IPR013727 Two-component sensor kinase N-terminal RD08_RS15825 IPR003738 Protein of unknown function DUF159 RD08_RS15840 IPR019659 Protein of unknown function DUF2514 RD08_RS15845 IPR023346 Lysozyme-like domain RD08_RS15845 IPR023347 Lysozyme domain RD08_RS15850 IPR032124 RD08_RS15850 RD08_RS15855 IPR013425 Autotransporter-associated beta strand repeat RD08_RS15870 IPR015406 Domain of unknown function DUF1983 RD08_RS15870 IPR032876 RD08_RS15870 RD08_RS15875 IPR000064 Endopeptidase, NLPC/P60 domain RD08_RS15880 IPR014974 Domain of unknown function DUF1833 RD08_RS15890 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RD08_RS15890 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal RD08_RS15895 IPR014915 Bacteriophage TLS, TfmB RD08_RS15900 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RD08_RS15900 IPR014859 Protein of unknown function DUF1789 RD08_RS15905 IPR014918 Bacteriophage T1, Orf41 RD08_RS15910 IPR003615 HNH nuclease RD08_RS15910 IPR016177 DNA-binding domain RD08_RS15915 IPR025395 Protein of unknown function DUF4128 RD08_RS15950 IPR001584 Integrase, catalytic core RD08_RS15950 IPR009057 Homeodomain-like RD08_RS15950 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15950 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS15950 IPR012337 Ribonuclease H-like domain RD08_RS15950 IPR024967 DNA-binding domain, IS481-type RD08_RS15970 IPR006528 Phage head morphogenesis domain RD08_RS15970 IPR017029 Putative phage head morphogenesis protein RD08_RS15975 IPR025129 Domain of unknown function DUF4055 RD08_RS15980 IPR004921 Terminase, large subunit RD08_RS15990 IPR001584 Integrase, catalytic core RD08_RS15990 IPR009057 Homeodomain-like RD08_RS15990 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS15990 IPR012337 Ribonuclease H-like domain RD08_RS15990 IPR024967 DNA-binding domain, IS481-type RD08_RS16010 IPR015927 Peptidase S24/S26A/S26B/S26C RD08_RS16010 IPR028360 Peptidase S24/S26, beta-ribbon domain RD08_RS16020 IPR001584 Integrase, catalytic core RD08_RS16020 IPR009057 Homeodomain-like RD08_RS16020 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16020 IPR012337 Ribonuclease H-like domain RD08_RS16020 IPR024967 DNA-binding domain, IS481-type RD08_RS16030 IPR004872 Lipoprotein NlpA family RD08_RS16035 IPR008318 Uncharacterised conserved protein UCP030820 RD08_RS16040 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RD08_RS16040 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RD08_RS16045 IPR003439 ABC transporter-like RD08_RS16045 IPR003593 AAA+ ATPase domain RD08_RS16045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16050 IPR003439 ABC transporter-like RD08_RS16050 IPR003593 AAA+ ATPase domain RD08_RS16050 IPR017871 ABC transporter, conserved site RD08_RS16050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16050 IPR032823 RD08_RS16050 RD08_RS16055 IPR001851 ABC transporter, permease RD08_RS16060 IPR001851 ABC transporter, permease RD08_RS16065 IPR028081 Leucine-binding protein domain RD08_RS16065 IPR028082 Periplasmic binding protein-like I RD08_RS16070 IPR000120 Amidase RD08_RS16070 IPR020556 Amidase, conserved site RD08_RS16070 IPR023631 Amidase signature domain RD08_RS16075 IPR001765 Carbonic anhydrase RD08_RS16075 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site RD08_RS16085 IPR001584 Integrase, catalytic core RD08_RS16085 IPR009057 Homeodomain-like RD08_RS16085 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16085 IPR012337 Ribonuclease H-like domain RD08_RS16085 IPR024967 DNA-binding domain, IS481-type RD08_RS16090 IPR001650 Helicase, C-terminal RD08_RS16090 IPR002121 HRDC domain RD08_RS16090 IPR004589 DNA helicase, ATP-dependent, RecQ type RD08_RS16090 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial RD08_RS16090 IPR010997 HRDC-like RD08_RS16090 IPR011545 DEAD/DEAH box helicase domain RD08_RS16090 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16090 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS16090 IPR018982 RQC domain RD08_RS16090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16090 IPR032284 RD08_RS16090 RD08_RS16095 IPR003593 AAA+ ATPase domain RD08_RS16095 IPR004605 DNA helicase, Holliday junction RuvB type RD08_RS16095 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal RD08_RS16095 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal RD08_RS16095 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16095 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16100 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD08_RS16105 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD08_RS16105 IPR016040 NAD(P)-binding domain RD08_RS16110 IPR000085 Bacterial DNA recombination protein RuvA RD08_RS16110 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD08_RS16110 IPR010994 RuvA domain 2-like RD08_RS16110 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal RD08_RS16110 IPR012340 Nucleic acid-binding, OB-fold RD08_RS16110 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RD08_RS16115 IPR002176 Crossover junction endodeoxyribonuclease RuvC RD08_RS16115 IPR012337 Ribonuclease H-like domain RD08_RS16115 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RD08_RS16120 IPR002695 AICARFT/IMPCHase bienzyme RD08_RS16120 IPR011607 Methylglyoxal synthase-like domain RD08_RS16120 IPR016193 Cytidine deaminase-like RD08_RS16120 IPR024051 AICAR transformylase domain RD08_RS16125 IPR002197 DNA binding HTH domain, Fis-type RD08_RS16125 IPR005412 DNA-binding protein Fis RD08_RS16125 IPR009057 Homeodomain-like RD08_RS16130 IPR001269 tRNA-dihydrouridine synthase RD08_RS16130 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RD08_RS16130 IPR013785 Aldolase-type TIM barrel RD08_RS16130 IPR018517 tRNA-dihydrouridine synthase, conserved site RD08_RS16130 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RD08_RS16130 IPR032887 RD08_RS16130 RD08_RS16135 IPR002938 Monooxygenase, FAD-binding RD08_RS16135 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RD08_RS16135 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RD08_RS16135 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS16145 IPR000994 Peptidase M24, structural domain RD08_RS16145 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RD08_RS16145 IPR007865 Aminopeptidase P, N-terminal RD08_RS16145 IPR028980 Creatinase/Aminopeptidase P, N-terminal RD08_RS16145 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RD08_RS16150 IPR004837 Sodium/calcium exchanger membrane region RD08_RS16160 IPR001584 Integrase, catalytic core RD08_RS16160 IPR009057 Homeodomain-like RD08_RS16160 IPR012337 Ribonuclease H-like domain RD08_RS16160 IPR024967 DNA-binding domain, IS481-type RD08_RS16165 IPR001584 Integrase, catalytic core RD08_RS16165 IPR009057 Homeodomain-like RD08_RS16165 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16165 IPR012337 Ribonuclease H-like domain RD08_RS16165 IPR024967 DNA-binding domain, IS481-type RD08_RS16170 IPR002299 Porin, Neisseria sp. type RD08_RS16170 IPR023614 Porin domain RD08_RS16175 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related RD08_RS16180 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RD08_RS16180 IPR005835 Nucleotidyl transferase RD08_RS16180 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS16185 IPR001915 Peptidase M48 RD08_RS16185 IPR011990 Tetratricopeptide-like helical domain RD08_RS16185 IPR030873 RD08_RS16185 RD08_RS16190 IPR012020 AB-hydrolase YheT, putative RD08_RS16190 IPR022742 Putative lysophospholipase RD08_RS16190 IPR029058 Alpha/Beta hydrolase fold RD08_RS16195 IPR009959 Polyketide cyclase SnoaL-like domain RD08_RS16195 IPR032710 RD08_RS16195 RD08_RS16200 IPR019401 Zinc finger, CHCC-type RD08_RS16205 IPR001544 Aminotransferase, class IV RD08_RS16205 IPR005785 Branched-chain amino acid aminotransferase I RD08_RS16210 IPR011606 Branched-chain amino acid transport, permease RD08_RS16215 IPR008407 Branched-chain amino acid transport, AzlD RD08_RS16220 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD08_RS16220 IPR001650 Helicase, C-terminal RD08_RS16220 IPR011545 DEAD/DEAH box helicase domain RD08_RS16220 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD08_RS16220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16225 IPR012336 Thioredoxin-like fold RD08_RS16225 IPR013766 Thioredoxin domain RD08_RS16235 IPR001584 Integrase, catalytic core RD08_RS16235 IPR009057 Homeodomain-like RD08_RS16235 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16235 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16235 IPR012337 Ribonuclease H-like domain RD08_RS16235 IPR024967 DNA-binding domain, IS481-type RD08_RS16240 IPR001453 Molybdopterin binding domain RD08_RS16245 IPR005471 Transcription regulator IclR, N-terminal RD08_RS16245 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16245 IPR014757 Transcription regulator IclR, C-terminal RD08_RS16245 IPR029016 GAF domain-like RD08_RS16250 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain RD08_RS16250 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD08_RS16255 IPR005064 Bordetella uptake gene RD08_RS16260 IPR010127 Phasin, subfamily 1 RD08_RS16260 IPR018968 Phasin RD08_RS16265 IPR001295 Dihydroorotate dehydrogenase, conserved site RD08_RS16265 IPR005719 Dihydroorotate dehydrogenase, class 2 RD08_RS16265 IPR005720 Dihydroorotate dehydrogenase domain RD08_RS16265 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 RD08_RS16265 IPR013785 Aldolase-type TIM barrel RD08_RS16270 IPR007471 Arginine-tRNA-protein transferase, N-terminal RD08_RS16270 IPR007472 Arginine-tRNA-protein transferase, C-terminal RD08_RS16270 IPR016181 Acyl-CoA N-acyltransferase RD08_RS16270 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic RD08_RS16270 IPR030700 RD08_RS16270 RD08_RS16275 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase RD08_RS16275 IPR016181 Acyl-CoA N-acyltransferase RD08_RS16280 IPR000086 NUDIX hydrolase domain RD08_RS16280 IPR015797 NUDIX hydrolase domain-like RD08_RS16280 IPR020084 NUDIX hydrolase, conserved site RD08_RS16280 IPR029401 Nudix hydrolase, N-terminal RD08_RS16285 IPR000847 Transcription regulator HTH, LysR RD08_RS16285 IPR005119 LysR, substrate-binding RD08_RS16285 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16290 IPR032808 RD08_RS16290 RD08_RS16295 IPR021332 Protein of unknown function DUF2944 RD08_RS16315 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD08_RS16320 IPR001584 Integrase, catalytic core RD08_RS16320 IPR009057 Homeodomain-like RD08_RS16320 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16320 IPR012337 Ribonuclease H-like domain RD08_RS16320 IPR024967 DNA-binding domain, IS481-type RD08_RS16325 IPR000524 Transcription regulator HTH, GntR RD08_RS16325 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS16325 IPR011711 GntR, C-terminal RD08_RS16325 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16330 IPR000399 TPP-binding enzyme, conserved site RD08_RS16330 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS16330 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS16330 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS16330 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS16330 IPR029061 Thiamin diphosphate-binding fold RD08_RS16335 IPR005064 Bordetella uptake gene RD08_RS16340 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD08_RS16345 IPR002505 Phosphate acetyl/butaryl transferase RD08_RS16345 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD08_RS16345 IPR012301 Malic enzyme, N-terminal domain RD08_RS16345 IPR012302 Malic enzyme, NAD-binding RD08_RS16345 IPR016040 NAD(P)-binding domain RD08_RS16350 IPR000847 Transcription regulator HTH, LysR RD08_RS16350 IPR005119 LysR, substrate-binding RD08_RS16350 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16355 IPR000515 MetI-like domain RD08_RS16360 IPR000515 MetI-like domain RD08_RS16365 IPR003439 ABC transporter-like RD08_RS16365 IPR003593 AAA+ ATPase domain RD08_RS16365 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS16365 IPR017871 ABC transporter, conserved site RD08_RS16365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16375 IPR009197 Microcystin LR degradation protein MlrC RD08_RS16375 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD08_RS16375 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD08_RS16380 IPR000847 Transcription regulator HTH, LysR RD08_RS16380 IPR005119 LysR, substrate-binding RD08_RS16380 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16390 IPR013538 Activator of Hsp90 ATPase homologue 1-like RD08_RS16390 IPR023393 START-like domain RD08_RS16395 IPR001845 HTH ArsR-type DNA-binding domain RD08_RS16395 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16400 IPR007844 AsmA RD08_RS16405 IPR005303 MOSC, N-terminal beta barrel RD08_RS16410 IPR004711 Benzoate transporter RD08_RS16415 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD08_RS16415 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS16420 IPR001980 Coenzyme A biosynthesis protein RD08_RS16420 IPR004821 Cytidyltransferase-like domain RD08_RS16420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS16425 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD08_RS16425 IPR004398 RNA methyltransferase, RsmD RD08_RS16425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS16430 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD08_RS16430 IPR003593 AAA+ ATPase domain RD08_RS16430 IPR004390 Signal-recognition particle receptor FtsY RD08_RS16430 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RD08_RS16430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16435 IPR007899 CHAD RD08_RS16440 IPR023577 CYTH-like domain RD08_RS16440 IPR033469 RD08_RS16440 RD08_RS16445 IPR000515 MetI-like domain RD08_RS16445 IPR005769 ABC transporter, permease PhnE/PtxC RD08_RS16450 IPR000515 MetI-like domain RD08_RS16450 IPR005769 ABC transporter, permease PhnE/PtxC RD08_RS16455 IPR003439 ABC transporter-like RD08_RS16455 IPR017871 ABC transporter, conserved site RD08_RS16455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16460 IPR001584 Integrase, catalytic core RD08_RS16460 IPR009057 Homeodomain-like RD08_RS16460 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16460 IPR012337 Ribonuclease H-like domain RD08_RS16460 IPR024967 DNA-binding domain, IS481-type RD08_RS16465 IPR003439 ABC transporter-like RD08_RS16465 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16470 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein RD08_RS16475 IPR005471 Transcription regulator IclR, N-terminal RD08_RS16475 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16475 IPR014757 Transcription regulator IclR, C-terminal RD08_RS16475 IPR029016 GAF domain-like RD08_RS16480 IPR006379 HAD-superfamily hydrolase, subfamily IIB RD08_RS16480 IPR023214 HAD-like domain RD08_RS16485 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RD08_RS16485 IPR017945 DHBP synthase RibB-like alpha/beta domain RD08_RS16485 IPR032677 RD08_RS16485 RD08_RS16490 IPR002180 6,7-dimethyl-8-ribityllumazine synthase RD08_RS16495 IPR006027 NusB/RsmB/TIM44 RD08_RS16495 IPR011605 NusB antitermination factor RD08_RS16500 IPR006283 Thiamine-monophosphate kinase RD08_RS16500 IPR010918 AIR synthase-related protein, C-terminal domain RD08_RS16500 IPR016188 PurM, N-terminal-like RD08_RS16505 IPR007686 YutG/PgpA domain RD08_RS16505 IPR026037 Phosphatidylglycerophosphatase A RD08_RS16510 IPR008136 CinA, C-terminal RD08_RS16515 IPR001754 Orotidine 5'-phosphate decarboxylase domain RD08_RS16515 IPR011060 Ribulose-phosphate binding barrel RD08_RS16515 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 RD08_RS16515 IPR013785 Aldolase-type TIM barrel RD08_RS16515 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RD08_RS16520 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS16525 IPR000829 Diacylglycerol kinase, prokaryotic RD08_RS16530 IPR017039 Virulence factor BrkB RD08_RS16535 IPR003991 Pertactin virulence factor family RD08_RS16535 IPR004899 Pertactin, central region RD08_RS16535 IPR005546 Autotransporter beta-domain RD08_RS16535 IPR006315 Outer membrane autotransporter barrel RD08_RS16535 IPR011050 Pectin lyase fold/virulence factor RD08_RS16535 IPR012332 P22 tailspike C-terminal domain-like RD08_RS16540 IPR001844 Chaperonin Cpn60 RD08_RS16540 IPR002423 Chaperonin Cpn60/TCP-1 RD08_RS16540 IPR018370 Chaperonin Cpn60, conserved site RD08_RS16540 IPR027409 GroEL-like apical domain RD08_RS16540 IPR027413 GroEL-like equatorial domain RD08_RS16545 IPR011032 GroES (chaperonin 10)-like RD08_RS16545 IPR018369 Chaperonin Cpn10, conserved site RD08_RS16545 IPR020818 Chaperonin Cpn10 RD08_RS16550 IPR011008 Dimeric alpha-beta barrel RD08_RS16555 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RD08_RS16560 IPR011008 Dimeric alpha-beta barrel RD08_RS16565 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD08_RS16565 IPR003953 FAD binding domain RD08_RS16565 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS16565 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD08_RS16570 IPR005064 Bordetella uptake gene RD08_RS16575 IPR000847 Transcription regulator HTH, LysR RD08_RS16575 IPR005119 LysR, substrate-binding RD08_RS16575 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16580 IPR003953 FAD binding domain RD08_RS16580 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS16580 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD08_RS16585 IPR001584 Integrase, catalytic core RD08_RS16585 IPR009057 Homeodomain-like RD08_RS16585 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16585 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16585 IPR012337 Ribonuclease H-like domain RD08_RS16585 IPR024967 DNA-binding domain, IS481-type RD08_RS16590 IPR001584 Integrase, catalytic core RD08_RS16590 IPR009057 Homeodomain-like RD08_RS16590 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16590 IPR012337 Ribonuclease H-like domain RD08_RS16590 IPR024967 DNA-binding domain, IS481-type RD08_RS16595 IPR001584 Integrase, catalytic core RD08_RS16595 IPR009057 Homeodomain-like RD08_RS16595 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16595 IPR012337 Ribonuclease H-like domain RD08_RS16595 IPR024967 DNA-binding domain, IS481-type RD08_RS16600 IPR000868 Isochorismatase-like RD08_RS16605 IPR000160 GGDEF domain RD08_RS16605 IPR009050 Globin-like RD08_RS16605 IPR012292 Globin, structural domain RD08_RS16605 IPR029787 Nucleotide cyclase RD08_RS16610 IPR003607 HD/PDEase domain RD08_RS16610 IPR006674 HD domain RD08_RS16640 IPR005532 Formylglycine-generating sulphatase enzyme domain RD08_RS16640 IPR016187 C-type lectin fold RD08_RS16640 IPR017806 Ergothioneine biosynthesis protein EgtB RD08_RS16640 IPR024775 DinB-like domain RD08_RS16645 IPR017804 Methyltransferase EgtD-like RD08_RS16645 IPR019257 Histidine-specific methyltransferase, SAM-dependent RD08_RS16645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS16655 IPR001736 Phospholipase D/Transphosphatidylase RD08_RS16655 IPR025202 Phospholipase D-like domain RD08_RS16660 IPR001584 Integrase, catalytic core RD08_RS16660 IPR009057 Homeodomain-like RD08_RS16660 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16660 IPR012337 Ribonuclease H-like domain RD08_RS16660 IPR024967 DNA-binding domain, IS481-type RD08_RS16665 IPR002932 Glutamate synthase domain RD08_RS16665 IPR013785 Aldolase-type TIM barrel RD08_RS16665 IPR024188 Glutamate synthase large subunit-like protein RD08_RS16665 IPR027283 Glutamate synthase large subunit-like protein, bacteria RD08_RS16670 IPR007272 Sulphur transport domain RD08_RS16675 IPR004776 Auxin efflux carrier RD08_RS16680 IPR000182 GNAT domain RD08_RS16680 IPR016181 Acyl-CoA N-acyltransferase RD08_RS16690 IPR005636 DTW RD08_RS16700 IPR003029 Ribosomal protein S1, RNA-binding domain RD08_RS16700 IPR004476 Ribonuclease II/ribonuclease R RD08_RS16700 IPR011129 Cold shock protein RD08_RS16700 IPR011805 Ribonuclease R RD08_RS16700 IPR012340 Nucleic acid-binding, OB-fold RD08_RS16700 IPR013223 Ribonuclease B, N-terminal OB domain RD08_RS16700 IPR022966 Ribonuclease II/R, conserved site RD08_RS16700 IPR022967 RNA-binding domain, S1 RD08_RS16705 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD08_RS16705 IPR004441 RNA methyltransferase TrmH family RD08_RS16705 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RD08_RS16705 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RD08_RS16705 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD08_RS16705 IPR029028 Alpha/beta knot methyltransferases RD08_RS16705 IPR029064 50S ribosomal protein L30e-like RD08_RS16710 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD08_RS16710 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS16710 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS16710 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS16715 IPR005123 Oxoglutarate/iron-dependent dioxygenase RD08_RS16715 IPR006620 Prolyl 4-hydroxylase, alpha subunit RD08_RS16715 IPR023550 PKHD-type hydroxylase RD08_RS16720 IPR000119 Histone-like bacterial DNA-binding protein RD08_RS16720 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD08_RS16720 IPR020816 Histone-like DNA-binding protein, conserved site RD08_RS16730 IPR003538 Gram-negative bacterial TonB protein RD08_RS16730 IPR006260 TonB, C-terminal RD08_RS16735 IPR002898 MotA/TolQ/ExbB proton channel RD08_RS16740 IPR003400 Biopolymer transport protein ExbD/TolR RD08_RS16745 IPR001789 Signal transduction response regulator, receiver domain RD08_RS16745 IPR001867 Signal transduction response regulator, C-terminal RD08_RS16745 IPR011006 CheY-like superfamily RD08_RS16745 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16750 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS16750 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS16750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS16755 IPR003855 K+ potassium transporter RD08_RS16755 IPR023051 Potassium uptake protein, low affinity, Kup RD08_RS16760 IPR001518 Argininosuccinate synthase RD08_RS16760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS16760 IPR018223 Argininosuccinate synthase, conserved site RD08_RS16760 IPR023437 Argininosuccinate synthase, type 2 subfamily RD08_RS16760 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail RD08_RS16760 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RD08_RS16765 IPR002292 Ornithine/putrescine carbamoyltransferase RD08_RS16765 IPR006130 Aspartate/ornithine carbamoyltransferase RD08_RS16765 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD08_RS16765 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD08_RS16765 IPR024904 Ornithine carbamoyltransferase RD08_RS16770 IPR004636 Acetylornithine/Succinylornithine transaminase family RD08_RS16770 IPR005814 Aminotransferase class-III RD08_RS16770 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS16770 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS16770 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS16775 IPR021969 Protein of unknown function DUF3579 RD08_RS16780 IPR000847 Transcription regulator HTH, LysR RD08_RS16780 IPR005119 LysR, substrate-binding RD08_RS16780 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16785 IPR002347 Glucose/ribitol dehydrogenase RD08_RS16785 IPR016040 NAD(P)-binding domain RD08_RS16790 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD08_RS16790 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD08_RS16790 IPR016040 NAD(P)-binding domain RD08_RS16790 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD08_RS16795 IPR005064 Bordetella uptake gene RD08_RS16805 IPR002220 DapA-like RD08_RS16805 IPR013785 Aldolase-type TIM barrel RD08_RS16810 IPR000524 Transcription regulator HTH, GntR RD08_RS16810 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS16810 IPR011711 GntR, C-terminal RD08_RS16810 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16815 IPR001584 Integrase, catalytic core RD08_RS16815 IPR010921 Trp repressor/replication initiator RD08_RS16815 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS16815 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16815 IPR012337 Ribonuclease H-like domain RD08_RS16815 IPR024967 DNA-binding domain, IS481-type RD08_RS16820 IPR011701 Major facilitator superfamily RD08_RS16820 IPR020846 Major facilitator superfamily domain RD08_RS16825 IPR003313 AraC-type arabinose-binding/dimerisation domain RD08_RS16825 IPR009057 Homeodomain-like RD08_RS16825 IPR011051 RmlC-like cupin domain RD08_RS16825 IPR014710 RmlC-like jelly roll fold RD08_RS16825 IPR018060 DNA binding HTH domain, AraC-type RD08_RS16825 IPR018062 HTH domain AraC-type, conserved site RD08_RS16825 IPR020449 Transcription regulator HTH, AraC- type RD08_RS16830 IPR003779 Carboxymuconolactone decarboxylase-like RD08_RS16830 IPR004674 Alkylhydroperoxidase AhpD RD08_RS16830 IPR004675 Alkylhydroperoxidase AhpD core RD08_RS16830 IPR029032 AhpD-like RD08_RS16835 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD08_RS16835 IPR012336 Thioredoxin-like fold RD08_RS16835 IPR024706 Peroxiredoxin, AhpC-type RD08_RS16840 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS16840 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS16840 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS16850 IPR001789 Signal transduction response regulator, receiver domain RD08_RS16850 IPR001867 Signal transduction response regulator, C-terminal RD08_RS16850 IPR011006 CheY-like superfamily RD08_RS16850 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS16850 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS16855 IPR000182 GNAT domain RD08_RS16855 IPR000905 Gcp-like domain RD08_RS16855 IPR006464 Ribosomal-protein-alanine acetyltransferase RD08_RS16855 IPR016181 Acyl-CoA N-acyltransferase RD08_RS16855 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ RD08_RS16860 IPR005122 Uracil-DNA glycosylase-like RD08_RS16860 IPR005273 Uracil-DNA glycosylase, family 4 domain RD08_RS16865 IPR011701 Major facilitator superfamily RD08_RS16865 IPR020846 Major facilitator superfamily domain RD08_RS16870 IPR003395 RecF/RecN/SMC, N-terminal RD08_RS16870 IPR010935 SMCs flexible hinge RD08_RS16870 IPR011890 Structural maintenance of chromosomes protein, prokaryotic RD08_RS16870 IPR024704 Structural maintenance of chromosomes protein RD08_RS16870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16875 IPR007449 ZipA, C-terminal FtsZ-binding domain RD08_RS16880 IPR001357 BRCT domain RD08_RS16880 IPR001679 NAD-dependent DNA ligase RD08_RS16880 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD08_RS16880 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RD08_RS16880 IPR004150 NAD-dependent DNA ligase, OB-fold RD08_RS16880 IPR010994 RuvA domain 2-like RD08_RS16880 IPR012340 Nucleic acid-binding, OB-fold RD08_RS16880 IPR013839 NAD-dependent DNA ligase, adenylation RD08_RS16880 IPR013840 NAD-dependent DNA ligase, N-terminal RD08_RS16880 IPR018239 NAD-dependent DNA ligase, active site RD08_RS16880 IPR033136 RD08_RS16880 RD08_RS16885 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RD08_RS16890 IPR002634 BolA protein RD08_RS16895 IPR006008 Intracellular septation protein A RD08_RS16900 IPR002579 Peptide methionine sulphoxide reductase MrsB RD08_RS16900 IPR011057 Mss4-like RD08_RS16900 IPR028427 Peptide methionine sulfoxide reductase RD08_RS16905 IPR003439 ABC transporter-like RD08_RS16905 IPR003593 AAA+ ATPase domain RD08_RS16905 IPR017871 ABC transporter, conserved site RD08_RS16905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16910 IPR003339 ABC/ECF transporter, transmembrane component RD08_RS16915 IPR003784 BioY protein RD08_RS16920 IPR028081 Leucine-binding protein domain RD08_RS16920 IPR028082 Periplasmic binding protein-like I RD08_RS16925 IPR001851 ABC transporter, permease RD08_RS16930 IPR001851 ABC transporter, permease RD08_RS16930 IPR003439 ABC transporter-like RD08_RS16930 IPR003593 AAA+ ATPase domain RD08_RS16930 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16935 IPR001544 Aminotransferase, class IV RD08_RS16940 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RD08_RS16945 IPR001851 ABC transporter, permease RD08_RS16950 IPR001851 ABC transporter, permease RD08_RS16955 IPR028081 Leucine-binding protein domain RD08_RS16955 IPR028082 Periplasmic binding protein-like I RD08_RS16960 IPR003439 ABC transporter-like RD08_RS16960 IPR003593 AAA+ ATPase domain RD08_RS16960 IPR017871 ABC transporter, conserved site RD08_RS16960 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16965 IPR003439 ABC transporter-like RD08_RS16965 IPR003593 AAA+ ATPase domain RD08_RS16965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS16965 IPR032823 RD08_RS16965 RD08_RS16970 IPR000445 Helix-hairpin-helix motif RD08_RS16970 IPR003265 HhH-GPD domain RD08_RS16970 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RD08_RS16970 IPR004035 Endonuclease III, iron-sulphur binding site RD08_RS16970 IPR004036 Endonuclease III-like, conserved site-2 RD08_RS16970 IPR005759 Endonuclease III RD08_RS16970 IPR011257 DNA glycosylase RD08_RS16970 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD08_RS16975 IPR007202 4Fe-4S domain RD08_RS16975 IPR010207 Electron transport complex, RnfB RD08_RS16975 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS16980 IPR009656 PHB de-polymerase, C-terminal RD08_RS16980 IPR010915 Polyhydroxyalkanoate depolymerase RD08_RS16980 IPR029058 Alpha/Beta hydrolase fold RD08_RS16985 IPR001221 Phenol hydroxylase reductase RD08_RS16985 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS16985 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD08_RS16985 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS16990 IPR000813 7Fe ferredoxin RD08_RS16990 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD08_RS16990 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD08_RS16990 IPR022569 Ferredoxin, C-terminal RD08_RS16995 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RD08_RS16995 IPR006406 Nicotinate phosphoribosyltransferase RD08_RS16995 IPR007229 Nicotinate phosphoribosyltransferase family RD08_RS17000 IPR006175 YjgF/Yer057p/UK114 family RD08_RS17000 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS17000 IPR019897 YjgF-like protein, conserved site RD08_RS17005 IPR005025 NADPH-dependent FMN reductase-like RD08_RS17005 IPR029039 Flavoprotein-like RD08_RS17010 IPR010384 MtfA family RD08_RS17010 IPR024079 Metallopeptidase, catalytic domain RD08_RS17015 IPR002912 ACT domain RD08_RS17015 IPR003607 HD/PDEase domain RD08_RS17015 IPR004095 TGS RD08_RS17015 IPR004811 RelA/SpoT family RD08_RS17015 IPR007685 RelA/SpoT RD08_RS17015 IPR012675 Beta-grasp domain RD08_RS17015 IPR012676 TGS-like RD08_RS17020 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD08_RS17020 IPR002933 Peptidase M20 RD08_RS17020 IPR010169 Acetylornithine deacetylase (ArgE) RD08_RS17020 IPR011650 Peptidase M20, dimerisation domain RD08_RS17025 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD08_RS17025 IPR006653 Tryptophan synthase, beta chain, conserved site RD08_RS17025 IPR006654 Tryptophan synthase, beta chain RD08_RS17025 IPR023026 Tryptophan synthase beta chain/beta chain-like RD08_RS17030 IPR002028 Tryptophan synthase, alpha chain RD08_RS17030 IPR011060 Ribulose-phosphate binding barrel RD08_RS17030 IPR013785 Aldolase-type TIM barrel RD08_RS17030 IPR018204 Tryptophan synthase, alpha chain, active site RD08_RS17035 IPR000022 Carboxyl transferase RD08_RS17035 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RD08_RS17035 IPR029045 ClpP/crotonase-like domain RD08_RS17045 IPR001584 Integrase, catalytic core RD08_RS17045 IPR009057 Homeodomain-like RD08_RS17045 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17045 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17045 IPR012337 Ribonuclease H-like domain RD08_RS17045 IPR024967 DNA-binding domain, IS481-type RD08_RS17050 IPR003199 Choloylglycine hydrolase/Peptidase C59 family RD08_RS17050 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS17050 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RD08_RS17055 IPR003029 Ribosomal protein S1, RNA-binding domain RD08_RS17055 IPR004659 Ribonuclease E/G RD08_RS17055 IPR012340 Nucleic acid-binding, OB-fold RD08_RS17055 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RD08_RS17055 IPR022967 RNA-binding domain, S1 RD08_RS17055 IPR028878 Ribonuclease E RD08_RS17060 IPR002942 RNA-binding S4 domain RD08_RS17060 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD08_RS17060 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RD08_RS17060 IPR006225 Pseudouridine synthase, RluC/RluD RD08_RS17060 IPR020103 Pseudouridine synthase, catalytic domain RD08_RS17065 IPR006439 HAD hydrolase, subfamily IA RD08_RS17065 IPR023198 Phosphoglycolate phosphatase, domain 2 RD08_RS17065 IPR023214 HAD-like domain RD08_RS17070 IPR000572 Oxidoreductase, molybdopterin-binding domain RD08_RS17070 IPR022867 Sulphoxide reductase catalytic subunit YedY RD08_RS17075 IPR013130 Ferric reductase transmembrane component-like domain RD08_RS17075 IPR022837 Sulphoxide reductase heme-binding subunit YedZ RD08_RS17080 IPR001584 Integrase, catalytic core RD08_RS17080 IPR009057 Homeodomain-like RD08_RS17080 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17080 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17080 IPR012337 Ribonuclease H-like domain RD08_RS17080 IPR024967 DNA-binding domain, IS481-type RD08_RS17085 IPR003673 CoA-transferase family III RD08_RS17085 IPR023606 CoA-transferase family III domain RD08_RS17090 IPR000847 Transcription regulator HTH, LysR RD08_RS17090 IPR005119 LysR, substrate-binding RD08_RS17090 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17095 IPR002539 MaoC-like domain RD08_RS17095 IPR029069 HotDog domain RD08_RS17100 IPR003673 CoA-transferase family III RD08_RS17100 IPR023606 CoA-transferase family III domain RD08_RS17115 IPR005064 Bordetella uptake gene RD08_RS17120 IPR000847 Transcription regulator HTH, LysR RD08_RS17120 IPR005119 LysR, substrate-binding RD08_RS17120 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17125 IPR006175 YjgF/Yer057p/UK114 family RD08_RS17125 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS17130 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS17130 IPR001221 Phenol hydroxylase reductase RD08_RS17130 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS17130 IPR006656 Molybdopterin oxidoreductase RD08_RS17130 IPR006657 Molydopterin dinucleotide-binding domain RD08_RS17130 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RD08_RS17130 IPR008333 Oxidoreductase, FAD-binding domain RD08_RS17130 IPR009010 Aspartate decarboxylase-like domain RD08_RS17130 IPR012675 Beta-grasp domain RD08_RS17130 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS17135 IPR006160 Short chain fatty acid transporter AtoE RD08_RS17140 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase RD08_RS17140 IPR015590 Aldehyde dehydrogenase domain RD08_RS17140 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS17140 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS17140 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS17140 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS17145 IPR000524 Transcription regulator HTH, GntR RD08_RS17145 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS17145 IPR011711 GntR, C-terminal RD08_RS17145 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17155 IPR002059 Cold-shock protein, DNA-binding RD08_RS17155 IPR011129 Cold shock protein RD08_RS17155 IPR012156 Cold shock, CspA RD08_RS17155 IPR012340 Nucleic acid-binding, OB-fold RD08_RS17155 IPR019844 Cold-shock conserved site RD08_RS17160 IPR000847 Transcription regulator HTH, LysR RD08_RS17160 IPR005119 LysR, substrate-binding RD08_RS17160 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17165 IPR001584 Integrase, catalytic core RD08_RS17165 IPR009057 Homeodomain-like RD08_RS17165 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17165 IPR012337 Ribonuclease H-like domain RD08_RS17165 IPR024967 DNA-binding domain, IS481-type RD08_RS17170 IPR001584 Integrase, catalytic core RD08_RS17170 IPR009057 Homeodomain-like RD08_RS17170 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17170 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17170 IPR012337 Ribonuclease H-like domain RD08_RS17170 IPR024967 DNA-binding domain, IS481-type RD08_RS17180 IPR002155 Thiolase RD08_RS17180 IPR016039 Thiolase-like RD08_RS17180 IPR020616 Thiolase, N-terminal RD08_RS17180 IPR020617 Thiolase, C-terminal RD08_RS17185 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS17190 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS17190 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS17190 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS17195 IPR000847 Transcription regulator HTH, LysR RD08_RS17195 IPR005119 LysR, substrate-binding RD08_RS17195 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17200 IPR005064 Bordetella uptake gene RD08_RS17205 IPR001753 Crotonase superfamily RD08_RS17205 IPR029045 ClpP/crotonase-like domain RD08_RS17210 IPR003673 CoA-transferase family III RD08_RS17210 IPR023606 CoA-transferase family III domain RD08_RS17215 IPR005496 Integral membrane protein TerC RD08_RS17220 IPR003416 MgtC/SapB/SrpB transporter RD08_RS17225 IPR000640 Translation elongation factor EFG, V domain RD08_RS17225 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD08_RS17225 IPR004540 Translation elongation factor EFG/EF2 RD08_RS17225 IPR005517 Translation elongation factor EFG/EF2, domain IV RD08_RS17225 IPR009000 Translation protein, beta-barrel domain RD08_RS17225 IPR009022 Elongation factor G, III-V domain RD08_RS17225 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS17225 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS17225 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS17230 IPR000524 Transcription regulator HTH, GntR RD08_RS17230 IPR004839 Aminotransferase, class I/classII RD08_RS17230 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17230 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS17230 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS17230 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS17235 IPR005939 Beta-lactamase hydrolase-like RD08_RS17235 IPR029021 Protein-tyrosine phosphatase-like RD08_RS17240 IPR006015 Universal stress protein A RD08_RS17240 IPR006016 UspA RD08_RS17240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS17245 IPR000795 Elongation factor, GTP-binding domain RD08_RS17245 IPR005225 Small GTP-binding protein domain RD08_RS17245 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS17245 IPR031157 RD08_RS17245 RD08_RS17250 IPR001584 Integrase, catalytic core RD08_RS17250 IPR009057 Homeodomain-like RD08_RS17250 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17250 IPR012337 Ribonuclease H-like domain RD08_RS17250 IPR024967 DNA-binding domain, IS481-type RD08_RS17255 IPR002220 DapA-like RD08_RS17255 IPR013785 Aldolase-type TIM barrel RD08_RS17260 IPR000847 Transcription regulator HTH, LysR RD08_RS17260 IPR005119 LysR, substrate-binding RD08_RS17260 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17265 IPR003673 CoA-transferase family III RD08_RS17265 IPR023606 CoA-transferase family III domain RD08_RS17270 IPR005064 Bordetella uptake gene RD08_RS17275 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS17275 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS17275 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS17275 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS17275 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS17280 IPR002539 MaoC-like domain RD08_RS17280 IPR029069 HotDog domain RD08_RS17290 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD08_RS17290 IPR012340 Nucleic acid-binding, OB-fold RD08_RS17290 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD08_RS17295 IPR002155 Thiolase RD08_RS17295 IPR016039 Thiolase-like RD08_RS17295 IPR020616 Thiolase, N-terminal RD08_RS17300 IPR001753 Crotonase superfamily RD08_RS17300 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS17300 IPR029045 ClpP/crotonase-like domain RD08_RS17305 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS17305 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS17305 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS17305 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS17310 IPR005064 Bordetella uptake gene RD08_RS17315 IPR001753 Crotonase superfamily RD08_RS17315 IPR003781 CoA-binding RD08_RS17315 IPR016040 NAD(P)-binding domain RD08_RS17315 IPR016102 Succinyl-CoA synthetase-like RD08_RS17315 IPR029045 ClpP/crotonase-like domain RD08_RS17315 IPR032875 RD08_RS17315 RD08_RS17320 IPR005471 Transcription regulator IclR, N-terminal RD08_RS17320 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17320 IPR014757 Transcription regulator IclR, C-terminal RD08_RS17320 IPR029016 GAF domain-like RD08_RS17325 IPR001017 Dehydrogenase, E1 component RD08_RS17325 IPR029061 Thiamin diphosphate-binding fold RD08_RS17330 IPR005475 Transketolase-like, pyrimidine-binding domain RD08_RS17330 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD08_RS17330 IPR029061 Thiamin diphosphate-binding fold RD08_RS17330 IPR033247 RD08_RS17330 RD08_RS17330 IPR033248 RD08_RS17330 RD08_RS17335 IPR001753 Crotonase superfamily RD08_RS17335 IPR014748 Crontonase, C-terminal RD08_RS17335 IPR029045 ClpP/crotonase-like domain RD08_RS17340 IPR000089 Biotin/lipoyl attachment RD08_RS17340 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD08_RS17340 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD08_RS17340 IPR011053 Single hybrid motif RD08_RS17340 IPR023213 Chloramphenicol acetyltransferase-like domain RD08_RS17345 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS17345 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS17345 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS17345 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS17345 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS17350 IPR000873 AMP-dependent synthetase/ligase RD08_RS17350 IPR020845 AMP-binding, conserved site RD08_RS17350 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS17355 IPR005656 MmgE/PrpD RD08_RS17360 IPR000709 Leu/Ile/Val-binding protein RD08_RS17360 IPR028081 Leucine-binding protein domain RD08_RS17360 IPR028082 Periplasmic binding protein-like I RD08_RS17365 IPR001851 ABC transporter, permease RD08_RS17370 IPR001851 ABC transporter, permease RD08_RS17370 IPR003439 ABC transporter-like RD08_RS17370 IPR003593 AAA+ ATPase domain RD08_RS17370 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS17375 IPR003439 ABC transporter-like RD08_RS17375 IPR003593 AAA+ ATPase domain RD08_RS17375 IPR017871 ABC transporter, conserved site RD08_RS17375 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS17380 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD08_RS17380 IPR006258 Dihydrolipoamide dehydrogenase RD08_RS17380 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD08_RS17380 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD08_RS17380 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS17385 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS17385 IPR009057 Homeodomain-like RD08_RS17385 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS17385 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS17385 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD08_RS17390 IPR006680 Amidohydrolase 1 RD08_RS17390 IPR032466 RD08_RS17390 RD08_RS17395 IPR005064 Bordetella uptake gene RD08_RS17405 IPR005471 Transcription regulator IclR, N-terminal RD08_RS17405 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17405 IPR014757 Transcription regulator IclR, C-terminal RD08_RS17405 IPR029016 GAF domain-like RD08_RS17410 IPR005064 Bordetella uptake gene RD08_RS17415 IPR001584 Integrase, catalytic core RD08_RS17415 IPR009057 Homeodomain-like RD08_RS17415 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17415 IPR012337 Ribonuclease H-like domain RD08_RS17415 IPR024967 DNA-binding domain, IS481-type RD08_RS17420 IPR000594 UBA/THIF-type NAD/FAD binding fold RD08_RS17420 IPR016040 NAD(P)-binding domain RD08_RS17425 IPR001478 PDZ domain RD08_RS17425 IPR004447 C-terminal-processing peptidase S41A RD08_RS17425 IPR005151 Tail specific protease RD08_RS17425 IPR029045 ClpP/crotonase-like domain RD08_RS17430 IPR011055 Duplicated hybrid motif RD08_RS17430 IPR016047 Peptidase M23 RD08_RS17435 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RD08_RS17435 IPR005952 Phosphoglycerate mutase 1 RD08_RS17435 IPR013078 Histidine phosphatase superfamily, clade-1 RD08_RS17435 IPR029033 Histidine phosphatase superfamily RD08_RS17440 IPR001763 Rhodanese-like domain RD08_RS17445 IPR002109 Glutaredoxin RD08_RS17445 IPR011767 Glutaredoxin active site RD08_RS17445 IPR011900 Glutaredoxin, GrxC RD08_RS17445 IPR012336 Thioredoxin-like fold RD08_RS17445 IPR014025 Glutaredoxin subgroup RD08_RS17450 IPR003708 Bacterial protein export chaperone SecB RD08_RS17455 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RD08_RS17455 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RD08_RS17455 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS17455 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RD08_RS17455 IPR013328 Dehydrogenase, multihelical RD08_RS17455 IPR016040 NAD(P)-binding domain RD08_RS17460 IPR005064 Bordetella uptake gene RD08_RS17465 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD08_RS17465 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RD08_RS17465 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD08_RS17465 IPR029028 Alpha/beta knot methyltransferases RD08_RS17470 IPR000836 Phosphoribosyltransferase domain RD08_RS17470 IPR029057 Phosphoribosyltransferase-like RD08_RS17475 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RD08_RS17475 IPR013216 Methyltransferase type 11 RD08_RS17475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS17480 IPR006336 Glutamate--cysteine ligase, GCS2 RD08_RS17480 IPR011793 Carboxylate-amine ligase, predicted RD08_RS17485 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS17490 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD08_RS17495 IPR000515 MetI-like domain RD08_RS17500 IPR003439 ABC transporter-like RD08_RS17500 IPR003593 AAA+ ATPase domain RD08_RS17500 IPR017871 ABC transporter, conserved site RD08_RS17500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS17505 IPR015168 SsuA/THI5-like RD08_RS17505 IPR027939 NMT1/THI5 family RD08_RS17510 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS17510 IPR002888 [2Fe-2S]-binding RD08_RS17510 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS17510 IPR010419 Carbon monoxide dehydrogenase subunit G RD08_RS17510 IPR012675 Beta-grasp domain RD08_RS17510 IPR023393 START-like domain RD08_RS17515 IPR002346 Molybdopterin dehydrogenase, FAD-binding RD08_RS17515 IPR005107 CO dehydrogenase flavoprotein, C-terminal RD08_RS17515 IPR016166 FAD-binding, type 2 RD08_RS17515 IPR016167 FAD-binding, type 2, subdomain 1 RD08_RS17515 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD08_RS17520 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD08_RS17520 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD08_RS17525 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD08_RS17525 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD08_RS17530 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS17535 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD08_RS17535 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD08_RS17535 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS17535 IPR028202 Reductase, C-terminal RD08_RS17540 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RD08_RS17540 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD08_RS17540 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD08_RS17540 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS17545 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD08_RS17545 IPR032710 RD08_RS17545 RD08_RS17550 IPR000868 Isochorismatase-like RD08_RS17560 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS17560 IPR029058 Alpha/Beta hydrolase fold RD08_RS17565 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RD08_RS17565 IPR028615 Maleate isomerase RD08_RS17570 IPR006680 Amidohydrolase 1 RD08_RS17570 IPR032466 RD08_RS17570 RD08_RS17575 IPR025877 MobA-like NTP transferase domain RD08_RS17575 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS17580 IPR003777 XdhC- CoxI RD08_RS17580 IPR016185 Pre-ATP-grasp domain RD08_RS17580 IPR027051 XdhC Rossmann domain RD08_RS17585 IPR000835 MarR-type HTH domain RD08_RS17585 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17590 IPR003445 Cation transporter RD08_RS17590 IPR004772 Potassium uptake protein TrkH family RD08_RS17595 IPR003148 Regulator of K+ conductance, N-terminal RD08_RS17595 IPR006036 Potassium uptake protein TrkA RD08_RS17595 IPR006037 Regulator of K+ conductance, C-terminal RD08_RS17595 IPR016040 NAD(P)-binding domain RD08_RS17600 IPR001789 Signal transduction response regulator, receiver domain RD08_RS17600 IPR009057 Homeodomain-like RD08_RS17600 IPR011006 CheY-like superfamily RD08_RS17605 IPR000014 PAS domain RD08_RS17605 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS17605 IPR003660 HAMP linker domain RD08_RS17605 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS17605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS17605 IPR013656 PAS fold-4 RD08_RS17605 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator RD08_RS17610 IPR025500 Protein of unknown function DUF4390 RD08_RS17615 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RD08_RS17615 IPR004573 rRNA small subunit methyltransferase B RD08_RS17615 IPR006027 NusB/RsmB/TIM44 RD08_RS17615 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RD08_RS17615 IPR023267 RNA (C5-cytosine) methyltransferase RD08_RS17615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS17620 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD08_RS17625 IPR002811 Aspartate dehydrogenase RD08_RS17625 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD08_RS17625 IPR011182 L-aspartate dehydrogenase RD08_RS17625 IPR016040 NAD(P)-binding domain RD08_RS17625 IPR020626 L-aspartate dehydrogenase, prokaryotic RD08_RS17630 IPR025870 Glyoxalase-like domain RD08_RS17630 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD08_RS17635 IPR001584 Integrase, catalytic core RD08_RS17635 IPR009057 Homeodomain-like RD08_RS17635 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17635 IPR012337 Ribonuclease H-like domain RD08_RS17635 IPR024967 DNA-binding domain, IS481-type RD08_RS17640 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD08_RS17645 IPR000847 Transcription regulator HTH, LysR RD08_RS17645 IPR005119 LysR, substrate-binding RD08_RS17645 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17645 IPR017685 Transcription regulator ArgP RD08_RS17650 IPR007410 DR1885-like metal-binding protein RD08_RS17655 IPR005064 Bordetella uptake gene RD08_RS17660 IPR011078 Uncharacterised protein family UPF0001 RD08_RS17660 IPR029066 PLP-binding barrel RD08_RS17665 IPR004839 Aminotransferase, class I/classII RD08_RS17665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS17665 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS17665 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS17670 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS17670 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD08_RS17680 IPR000891 Pyruvate carboxyltransferase RD08_RS17680 IPR013785 Aldolase-type TIM barrel RD08_RS17685 IPR003488 DNA recombination-mediator protein A RD08_RS17690 IPR000485 AsnC-type HTH domain RD08_RS17690 IPR011008 Dimeric alpha-beta barrel RD08_RS17690 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17690 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD08_RS17690 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS17690 IPR019888 Transcription regulator AsnC-type RD08_RS17695 IPR000192 Aminotransferase class V domain RD08_RS17695 IPR010111 Kynureninase RD08_RS17695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS17695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS17695 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS17700 IPR000181 Formylmethionine deformylase RD08_RS17700 IPR023635 Peptide deformylase RD08_RS17705 IPR001584 Integrase, catalytic core RD08_RS17705 IPR009057 Homeodomain-like RD08_RS17705 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17705 IPR012337 Ribonuclease H-like domain RD08_RS17705 IPR024967 DNA-binding domain, IS481-type RD08_RS17710 IPR001555 Phosphoribosylglycinamide formyltransferase, active site RD08_RS17710 IPR002376 Formyl transferase, N-terminal RD08_RS17710 IPR005793 Formyl transferase, C-terminal RD08_RS17710 IPR005794 Methionyl-tRNA formyltransferase RD08_RS17710 IPR011034 Formyl transferase, C-terminal-like RD08_RS17715 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD08_RS17715 IPR012349 FMN-binding split barrel RD08_RS17715 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent RD08_RS17720 IPR023214 HAD-like domain RD08_RS17725 IPR032710 RD08_RS17725 RD08_RS17730 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RD08_RS17730 IPR031100 RD08_RS17730 RD08_RS17735 IPR002024 Bacterioferritin RD08_RS17735 IPR008331 Ferritin/DPS protein domain RD08_RS17735 IPR009078 Ferritin-like superfamily RD08_RS17735 IPR012347 Ferritin-related RD08_RS17735 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold RD08_RS17740 IPR005839 Methylthiotransferase RD08_RS17740 IPR005840 Ribosomal protein S12 methylthiotransferase RimO RD08_RS17740 IPR006638 Elongator protein 3/MiaB/NifB RD08_RS17740 IPR007197 Radical SAM RD08_RS17740 IPR012340 Nucleic acid-binding, OB-fold RD08_RS17740 IPR013848 Methylthiotransferase, N-terminal RD08_RS17740 IPR020612 Methylthiotransferase, conserved site RD08_RS17740 IPR023404 Radical SAM, alpha/beta horseshoe RD08_RS17740 IPR023970 Methylthiotransferase/radical SAM-type protein RD08_RS17745 IPR004370 4-oxalocrotonate tautomerase RD08_RS17745 IPR014347 Tautomerase/MIF superfamily RD08_RS17750 IPR006076 FAD dependent oxidoreductase RD08_RS17750 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS17755 IPR005064 Bordetella uptake gene RD08_RS17760 IPR000524 Transcription regulator HTH, GntR RD08_RS17760 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS17760 IPR011711 GntR, C-terminal RD08_RS17760 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17765 IPR001584 Integrase, catalytic core RD08_RS17765 IPR009057 Homeodomain-like RD08_RS17765 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17765 IPR012337 Ribonuclease H-like domain RD08_RS17765 IPR024967 DNA-binding domain, IS481-type RD08_RS17770 IPR005814 Aminotransferase class-III RD08_RS17770 IPR010164 Ornithine aminotransferase RD08_RS17770 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS17770 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS17770 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS17775 IPR006035 Ureohydrolase RD08_RS17775 IPR014033 Arginase RD08_RS17775 IPR020855 Ureohydrolase, manganese-binding site RD08_RS17775 IPR023696 Ureohydrolase domain RD08_RS17780 IPR001584 Integrase, catalytic core RD08_RS17780 IPR009057 Homeodomain-like RD08_RS17780 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17780 IPR012337 Ribonuclease H-like domain RD08_RS17780 IPR024967 DNA-binding domain, IS481-type RD08_RS17785 IPR005064 Bordetella uptake gene RD08_RS17790 IPR003779 Carboxymuconolactone decarboxylase-like RD08_RS17790 IPR004675 Alkylhydroperoxidase AhpD core RD08_RS17790 IPR029032 AhpD-like RD08_RS17795 IPR001753 Crotonase superfamily RD08_RS17795 IPR029045 ClpP/crotonase-like domain RD08_RS17800 IPR005471 Transcription regulator IclR, N-terminal RD08_RS17800 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17800 IPR014757 Transcription regulator IclR, C-terminal RD08_RS17800 IPR029016 GAF domain-like RD08_RS17805 IPR000873 AMP-dependent synthetase/ligase RD08_RS17805 IPR020845 AMP-binding, conserved site RD08_RS17805 IPR025110 AMP-binding enzyme C-terminal domain RD08_RS17810 IPR005064 Bordetella uptake gene RD08_RS17815 IPR007247 Ureidoglycolate hydrolase RD08_RS17815 IPR011051 RmlC-like cupin domain RD08_RS17815 IPR024060 Ureidoglycolate hydrolase domain RD08_RS17820 IPR005546 Autotransporter beta-domain RD08_RS17820 IPR006315 Outer membrane autotransporter barrel RD08_RS17820 IPR011050 Pectin lyase fold/virulence factor RD08_RS17820 IPR012332 P22 tailspike C-terminal domain-like RD08_RS17820 IPR013425 Autotransporter-associated beta strand repeat RD08_RS17825 IPR012556 Entericidin EcnAB RD08_RS17835 IPR022000 Domain of unknown function (DUF3596) RD08_RS17840 IPR000847 Transcription regulator HTH, LysR RD08_RS17840 IPR005119 LysR, substrate-binding RD08_RS17840 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17845 IPR006439 HAD hydrolase, subfamily IA RD08_RS17845 IPR023214 HAD-like domain RD08_RS17850 IPR001608 Alanine racemase, N-terminal RD08_RS17850 IPR026956 D-serine dehydratase-like domain RD08_RS17850 IPR029066 PLP-binding barrel RD08_RS17855 IPR010879 Domain of unknown function DUF1508 RD08_RS17860 IPR001107 Band 7 protein RD08_RS17860 IPR001972 Stomatin family RD08_RS17865 IPR004046 Glutathione S-transferase, C-terminal RD08_RS17865 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS17865 IPR012336 Thioredoxin-like fold RD08_RS17870 IPR006175 YjgF/Yer057p/UK114 family RD08_RS17870 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD08_RS17875 IPR001584 Integrase, catalytic core RD08_RS17875 IPR009057 Homeodomain-like RD08_RS17875 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17875 IPR012337 Ribonuclease H-like domain RD08_RS17875 IPR024967 DNA-binding domain, IS481-type RD08_RS17890 IPR001584 Integrase, catalytic core RD08_RS17890 IPR009057 Homeodomain-like RD08_RS17890 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17890 IPR012337 Ribonuclease H-like domain RD08_RS17890 IPR024967 DNA-binding domain, IS481-type RD08_RS17915 IPR004590 DNA single-strand annealing protein RecT RD08_RS17915 IPR018330 RecT family RD08_RS17920 IPR011335 Restriction endonuclease type II-like RD08_RS17920 IPR011604 Exonuclease, phage-type/RecB, C-terminal RD08_RS17920 IPR019080 YqaJ viral recombinase RD08_RS17950 IPR002104 Integrase, catalytic RD08_RS17950 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD08_RS17950 IPR013762 Integrase-like, catalytic core RD08_RS17955 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS17955 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS17955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS17955 IPR013727 Two-component sensor kinase N-terminal RD08_RS17960 IPR021597 Protein of unknown function DUF3220 RD08_RS17970 IPR000847 Transcription regulator HTH, LysR RD08_RS17970 IPR005119 LysR, substrate-binding RD08_RS17970 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS17975 IPR003680 Flavodoxin-like fold RD08_RS17975 IPR029039 Flavoprotein-like RD08_RS17980 IPR001584 Integrase, catalytic core RD08_RS17980 IPR009057 Homeodomain-like RD08_RS17980 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS17980 IPR012337 Ribonuclease H-like domain RD08_RS17980 IPR024967 DNA-binding domain, IS481-type RD08_RS17985 IPR001708 Membrane insertase OXA1/ALB3/YidC RD08_RS17985 IPR019998 Membrane insertase YidC RD08_RS17985 IPR028053 Membrane insertase YidC, N-terminal RD08_RS17985 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RD08_RS17990 IPR002696 Putative membrane protein insertion efficiency factor RD08_RS17995 IPR000100 Ribonuclease P RD08_RS17995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS17995 IPR020539 Ribonuclease P, conserved site RD08_RS17995 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS18000 IPR000271 Ribosomal protein L34 RD08_RS18000 IPR020939 Ribosomal protein L34, conserved site RD08_RS18005 IPR001957 Chromosomal replication control, initiator DnaA RD08_RS18005 IPR003593 AAA+ ATPase domain RD08_RS18005 IPR010921 Trp repressor/replication initiator RD08_RS18005 IPR013159 Chromosomal replication initiator, DnaA C-terminal RD08_RS18005 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RD08_RS18005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RD08_RS18005 IPR020591 Chromosomal replication control, initiator DnaA-like RD08_RS18005 IPR024633 DnaA N-terminal domain RD08_RS18005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18010 IPR001001 DNA polymerase III, beta chain RD08_RS18010 IPR022634 DNA polymerase III, beta chain, N-terminal RD08_RS18010 IPR022635 DNA polymerase III, beta chain, C-terminal RD08_RS18010 IPR022637 DNA polymerase III, beta chain, central RD08_RS18015 IPR000565 DNA topoisomerase, type IIA, subunit B RD08_RS18015 IPR001241 DNA topoisomerase, type IIA RD08_RS18015 IPR002288 DNA gyrase B subunit, C-terminal RD08_RS18015 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS18015 IPR006171 Toprim domain RD08_RS18015 IPR011557 DNA gyrase, subunit B RD08_RS18015 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RD08_RS18015 IPR013759 DNA topoisomerase, type IIA, central domain RD08_RS18015 IPR013760 DNA topoisomerase, type IIA-like domain RD08_RS18015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS18015 IPR018522 DNA topoisomerase, type IIA, conserved site RD08_RS18015 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS18020 IPR005471 Transcription regulator IclR, N-terminal RD08_RS18020 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18020 IPR014757 Transcription regulator IclR, C-terminal RD08_RS18020 IPR029016 GAF domain-like RD08_RS18025 IPR000120 Amidase RD08_RS18025 IPR020556 Amidase, conserved site RD08_RS18025 IPR023631 Amidase signature domain RD08_RS18030 IPR005064 Bordetella uptake gene RD08_RS18040 IPR000262 FMN-dependent dehydrogenase RD08_RS18040 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD08_RS18040 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD08_RS18040 IPR013785 Aldolase-type TIM barrel RD08_RS18045 IPR009057 Homeodomain-like RD08_RS18045 IPR010499 Bacterial transcription activator, effector binding RD08_RS18045 IPR011256 Regulatory factor, effector binding domain RD08_RS18045 IPR018060 DNA binding HTH domain, AraC-type RD08_RS18045 IPR018062 HTH domain AraC-type, conserved site RD08_RS18045 IPR020449 Transcription regulator HTH, AraC- type RD08_RS18045 IPR029442 GyrI-like small molecule binding domain RD08_RS18055 IPR001584 Integrase, catalytic core RD08_RS18055 IPR009057 Homeodomain-like RD08_RS18055 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS18055 IPR012337 Ribonuclease H-like domain RD08_RS18055 IPR024967 DNA-binding domain, IS481-type RD08_RS18060 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS18060 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD08_RS18065 IPR000551 MerR-type HTH domain RD08_RS18065 IPR009061 DNA binding domain, putative RD08_RS18070 IPR001279 Beta-lactamase-like RD08_RS18075 IPR001584 Integrase, catalytic core RD08_RS18075 IPR009057 Homeodomain-like RD08_RS18075 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS18075 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18075 IPR012337 Ribonuclease H-like domain RD08_RS18075 IPR024967 DNA-binding domain, IS481-type RD08_RS18080 IPR006089 Acyl-CoA dehydrogenase, conserved site RD08_RS18080 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD08_RS18080 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD08_RS18080 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD08_RS18090 IPR002155 Thiolase RD08_RS18090 IPR016039 Thiolase-like RD08_RS18090 IPR020610 Thiolase, active site RD08_RS18090 IPR020616 Thiolase, N-terminal RD08_RS18090 IPR020617 Thiolase, C-terminal RD08_RS18095 IPR000022 Carboxyl transferase RD08_RS18095 IPR029045 ClpP/crotonase-like domain RD08_RS18100 IPR000089 Biotin/lipoyl attachment RD08_RS18100 IPR001882 Biotin-binding site RD08_RS18100 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD08_RS18100 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD08_RS18100 IPR005482 Biotin carboxylase, C-terminal RD08_RS18100 IPR011053 Single hybrid motif RD08_RS18100 IPR011054 Rudiment single hybrid motif RD08_RS18100 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS18100 IPR013816 ATP-grasp fold, subdomain 2 RD08_RS18100 IPR016185 Pre-ATP-grasp domain RD08_RS18105 IPR023387 DUF1653-like domain RD08_RS18110 IPR004636 Acetylornithine/Succinylornithine transaminase family RD08_RS18110 IPR005814 Aminotransferase class-III RD08_RS18110 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS18110 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS18110 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS18115 IPR005064 Bordetella uptake gene RD08_RS18120 IPR001608 Alanine racemase, N-terminal RD08_RS18120 IPR026956 D-serine dehydratase-like domain RD08_RS18120 IPR029066 PLP-binding barrel RD08_RS18125 IPR011852 TRAP transporter solute receptor, TAXI family RD08_RS18130 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD08_RS18130 IPR011853 TRAP transporter, 4TM/12TM fusion protein RD08_RS18135 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS18135 IPR010917 TonB-dependent receptor, conserved site RD08_RS18135 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RD08_RS18135 IPR011276 TonB-dependent haem/haemoglobin receptor RD08_RS18135 IPR012910 TonB-dependent receptor, plug RD08_RS18140 IPR007456 Protein of unknown function DUF494 RD08_RS18150 IPR018677 Protein of unknown function DUF2157, membrane RD08_RS18150 IPR025513 Domain of unknown function DUF4401 RD08_RS18150 IPR025833 GDYXXLXY protein RD08_RS18155 IPR000380 DNA topoisomerase, type IA RD08_RS18155 IPR003601 DNA topoisomerase, type IA, domain 2 RD08_RS18155 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RD08_RS18155 IPR005738 DNA topoisomerase III RD08_RS18155 IPR006171 Toprim domain RD08_RS18155 IPR013497 DNA topoisomerase, type IA, central RD08_RS18155 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RD08_RS18155 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RD08_RS18155 IPR023405 DNA topoisomerase, type IA, core domain RD08_RS18155 IPR023406 DNA topoisomerase, type IA, active site RD08_RS18155 IPR025589 Topoisomerase C-terminal repeat RD08_RS18160 IPR015168 SsuA/THI5-like RD08_RS18165 IPR003439 ABC transporter-like RD08_RS18165 IPR003593 AAA+ ATPase domain RD08_RS18165 IPR017871 ABC transporter, conserved site RD08_RS18165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18170 IPR000515 MetI-like domain RD08_RS18175 IPR002347 Glucose/ribitol dehydrogenase RD08_RS18175 IPR016040 NAD(P)-binding domain RD08_RS18175 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD08_RS18180 IPR015590 Aldehyde dehydrogenase domain RD08_RS18180 IPR016160 Aldehyde dehydrogenase, cysteine active site RD08_RS18180 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS18180 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS18180 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS18180 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD08_RS18185 IPR002347 Glucose/ribitol dehydrogenase RD08_RS18185 IPR016040 NAD(P)-binding domain RD08_RS18190 IPR000399 TPP-binding enzyme, conserved site RD08_RS18190 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS18190 IPR012000 Thiamine pyrophosphate enzyme, central domain RD08_RS18190 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD08_RS18190 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD08_RS18190 IPR029035 DHS-like NAD/FAD-binding domain RD08_RS18190 IPR029061 Thiamin diphosphate-binding fold RD08_RS18195 IPR000485 AsnC-type HTH domain RD08_RS18195 IPR011008 Dimeric alpha-beta barrel RD08_RS18195 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18195 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD08_RS18195 IPR019887 Transcription regulator AsnC-type, C-terminal RD08_RS18195 IPR019888 Transcription regulator AsnC-type RD08_RS18200 IPR021134 Bestrophin/UPF0187 RD08_RS18205 IPR001214 SET domain RD08_RS18210 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RD08_RS18210 IPR017945 DHBP synthase RibB-like alpha/beta domain RD08_RS18220 IPR001584 Integrase, catalytic core RD08_RS18220 IPR009057 Homeodomain-like RD08_RS18220 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS18220 IPR012337 Ribonuclease H-like domain RD08_RS18220 IPR024967 DNA-binding domain, IS481-type RD08_RS18225 IPR000489 Pterin-binding RD08_RS18225 IPR003726 Homocysteine S-methyltransferase RD08_RS18225 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RD08_RS18225 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RD08_RS18225 IPR006158 Cobalamin (vitamin B12)-binding domain RD08_RS18225 IPR011005 Dihydropteroate synthase-like RD08_RS18225 IPR011822 Cobalamin-dependent methionine synthase RD08_RS18230 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS18230 IPR012910 TonB-dependent receptor, plug RD08_RS18235 IPR002491 ABC transporter periplasmic binding domain RD08_RS18240 IPR008867 Thiazole biosynthesis RD08_RS18240 IPR013785 Aldolase-type TIM barrel RD08_RS18245 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RD08_RS18245 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD08_RS18245 IPR029056 Ribokinase-like RD08_RS18250 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RD08_RS18250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS18255 IPR003423 Outer membrane efflux protein RD08_RS18260 IPR003423 Outer membrane efflux protein RD08_RS18260 IPR010130 Type I secretion outer membrane protein, TolC RD08_RS18265 IPR004821 Cytidyltransferase-like domain RD08_RS18265 IPR011914 RfaE bifunctional protein, domain II RD08_RS18265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS18270 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD08_RS18270 IPR003346 Transposase, IS116/IS110/IS902 RD08_RS18275 IPR002549 Uncharacterised protein family UPF0118 RD08_RS18280 IPR008775 Phytanoyl-CoA dioxygenase RD08_RS18285 IPR003148 Regulator of K+ conductance, N-terminal RD08_RS18285 IPR013099 Two pore domain potassium channel domain RD08_RS18285 IPR016040 NAD(P)-binding domain RD08_RS18290 IPR001584 Integrase, catalytic core RD08_RS18290 IPR009057 Homeodomain-like RD08_RS18290 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS18290 IPR012337 Ribonuclease H-like domain RD08_RS18290 IPR024967 DNA-binding domain, IS481-type RD08_RS18295 IPR005679 Ribosomal protein S12, bacteria RD08_RS18295 IPR006032 Ribosomal protein S12/S23 RD08_RS18295 IPR012340 Nucleic acid-binding, OB-fold RD08_RS18300 IPR000235 Ribosomal protein S5/S7 RD08_RS18300 IPR005717 Ribosomal protein S7, bacterial/organellar-type RD08_RS18300 IPR020606 Ribosomal protein S7, conserved site RD08_RS18300 IPR023798 Ribosomal protein S7 domain RD08_RS18305 IPR000640 Translation elongation factor EFG, V domain RD08_RS18305 IPR000795 Elongation factor, GTP-binding domain RD08_RS18305 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD08_RS18305 IPR004540 Translation elongation factor EFG/EF2 RD08_RS18305 IPR005225 Small GTP-binding protein domain RD08_RS18305 IPR005517 Translation elongation factor EFG/EF2, domain IV RD08_RS18305 IPR009000 Translation protein, beta-barrel domain RD08_RS18305 IPR009022 Elongation factor G, III-V domain RD08_RS18305 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS18305 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS18305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18305 IPR031157 RD08_RS18305 RD08_RS18310 IPR000795 Elongation factor, GTP-binding domain RD08_RS18310 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RD08_RS18310 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD08_RS18310 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RD08_RS18310 IPR005225 Small GTP-binding protein domain RD08_RS18310 IPR009000 Translation protein, beta-barrel domain RD08_RS18310 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RD08_RS18310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18310 IPR031157 RD08_RS18310 RD08_RS18315 IPR001848 Ribosomal protein S10 RD08_RS18315 IPR018268 Ribosomal protein S10, conserved site RD08_RS18315 IPR027486 Ribosomal protein S10 domain RD08_RS18320 IPR000597 Ribosomal protein L3 RD08_RS18320 IPR009000 Translation protein, beta-barrel domain RD08_RS18320 IPR019926 Ribosomal protein L3, conserved site RD08_RS18320 IPR019927 Ribosomal protein L3, bacterial/organelle-type RD08_RS18325 IPR002136 Ribosomal protein L4/L1e RD08_RS18325 IPR013005 Ribosomal protein L4/L1e, bacterial-type RD08_RS18325 IPR023574 Ribosomal protein L4 domain RD08_RS18330 IPR012677 Nucleotide-binding, alpha-beta plait RD08_RS18330 IPR012678 Ribosomal protein L23/L15e core domain RD08_RS18330 IPR013025 Ribosomal protein L25/L23 RD08_RS18335 IPR002171 Ribosomal protein L2 RD08_RS18335 IPR005880 Ribosomal protein L2, bacterial/organellar-type RD08_RS18335 IPR008991 Translation protein SH3-like domain RD08_RS18335 IPR012340 Nucleic acid-binding, OB-fold RD08_RS18335 IPR014722 Ribosomal protein L2 domain 2 RD08_RS18335 IPR014726 Ribosomal protein L2, domain 3 RD08_RS18335 IPR022666 Ribosomal Proteins L2, RNA binding domain RD08_RS18335 IPR022669 Ribosomal protein L2, C-terminal RD08_RS18335 IPR022671 Ribosomal protein L2, conserved site RD08_RS18340 IPR002222 Ribosomal protein S19/S15 RD08_RS18340 IPR005732 Ribosomal protein S19, bacterial-type RD08_RS18340 IPR020934 Ribosomal protein S19 conserved site RD08_RS18340 IPR023575 Ribosomal protein S19, superfamily RD08_RS18345 IPR001063 Ribosomal protein L22/L17 RD08_RS18345 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RD08_RS18345 IPR018260 Ribosomal protein L22/L17, conserved site RD08_RS18350 IPR001351 Ribosomal protein S3, C-terminal RD08_RS18350 IPR004044 K Homology domain, type 2 RD08_RS18350 IPR004087 K Homology domain RD08_RS18350 IPR005704 Ribosomal protein S3, bacterial RD08_RS18350 IPR009019 K homology domain, prokaryotic type RD08_RS18350 IPR015946 K homology domain-like, alpha/beta RD08_RS18350 IPR018280 Ribosomal protein S3, conserved site RD08_RS18355 IPR000114 Ribosomal protein L16 RD08_RS18355 IPR016180 Ribosomal protein L10e/L16 RD08_RS18355 IPR020798 Ribosomal protein L16, conserved site RD08_RS18360 IPR001854 Ribosomal protein L29 RD08_RS18360 IPR018254 Ribosomal protein L29, conserved site RD08_RS18365 IPR000266 Ribosomal protein S17 RD08_RS18365 IPR012340 Nucleic acid-binding, OB-fold RD08_RS18365 IPR019979 Ribosomal protein S17, conserved site RD08_RS18365 IPR019984 Ribosomal protein S17, bacterial-type RD08_RS18370 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS18370 IPR029058 Alpha/Beta hydrolase fold RD08_RS18375 IPR015590 Aldehyde dehydrogenase domain RD08_RS18375 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS18375 IPR016162 Aldehyde dehydrogenase, N-terminal RD08_RS18375 IPR016163 Aldehyde dehydrogenase, C-terminal RD08_RS18385 IPR000218 Ribosomal protein L14b/L23e RD08_RS18385 IPR005745 Ribosomal protein L14, bacterial-type RD08_RS18385 IPR019972 Ribosomal protein L14 conserved site RD08_RS18390 IPR003256 Ribosomal protein L24 RD08_RS18390 IPR005825 Ribosomal protein L24/L26, conserved site RD08_RS18390 IPR008991 Translation protein SH3-like domain RD08_RS18390 IPR014722 Ribosomal protein L2 domain 2 RD08_RS18395 IPR002132 Ribosomal protein L5 RD08_RS18395 IPR020929 Ribosomal protein L5, conserved site RD08_RS18395 IPR020930 Ribosomal protein L5, bacterial-type RD08_RS18395 IPR022803 Ribosomal protein L5 domain RD08_RS18395 IPR031309 RD08_RS18395 RD08_RS18395 IPR031310 RD08_RS18395 RD08_RS18400 IPR001209 Ribosomal protein S14 RD08_RS18400 IPR023036 Ribosomal protein S14, bacterial/plastid RD08_RS18405 IPR000630 Ribosomal protein S8 RD08_RS18410 IPR000702 Ribosomal protein L6 RD08_RS18410 IPR002358 Ribosomal protein L6, conserved site RD08_RS18410 IPR019906 Ribosomal protein L6, bacterial-type RD08_RS18410 IPR020040 Ribosomal protein L6, alpha-beta domain RD08_RS18415 IPR004389 Ribosomal protein L18, bacterial-type RD08_RS18415 IPR005484 Ribosomal protein L18/L5 RD08_RS18420 IPR000851 Ribosomal protein S5 RD08_RS18420 IPR005324 Ribosomal protein S5, C-terminal RD08_RS18420 IPR005712 Ribosomal protein S5, bacterial-type RD08_RS18420 IPR013810 Ribosomal protein S5, N-terminal RD08_RS18420 IPR014720 Double-stranded RNA-binding domain RD08_RS18420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD08_RS18420 IPR018192 Ribosomal protein S5, N-terminal, conserved site RD08_RS18420 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS18425 IPR005996 Ribosomal protein L30, bacterial-type RD08_RS18425 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RD08_RS18425 IPR018038 Ribosomal protein L30, conserved site RD08_RS18430 IPR005749 Ribosomal protein L15, bacterial-type RD08_RS18430 IPR021131 Ribosomal protein L18e/L15P RD08_RS18430 IPR030878 RD08_RS18430 RD08_RS18435 IPR002208 SecY/SEC61-alpha family RD08_RS18435 IPR023201 SecY subunit domain RD08_RS18435 IPR026593 Protein translocase subunit SecY RD08_RS18435 IPR030659 RD08_RS18435 RD08_RS18440 IPR004368 Translation initiation factor IF-1 RD08_RS18440 IPR006196 RNA-binding domain, S1, IF1 type RD08_RS18440 IPR012340 Nucleic acid-binding, OB-fold RD08_RS18445 IPR000473 Ribosomal protein L36 RD08_RS18450 IPR001892 Ribosomal protein S13 RD08_RS18450 IPR010979 Ribosomal protein S13-like, H2TH RD08_RS18450 IPR018269 Ribosomal protein S13, conserved site RD08_RS18450 IPR019980 Ribosomal protein S13, bacterial-type RD08_RS18450 IPR027437 30s ribosomal protein S13, C-terminal RD08_RS18455 IPR001971 Ribosomal protein S11 RD08_RS18455 IPR018102 Ribosomal S11, conserved site RD08_RS18455 IPR019981 Ribosomal protein S11, bacterial-type RD08_RS18460 IPR001912 Ribosomal protein S4/S9, N-terminal RD08_RS18460 IPR002942 RNA-binding S4 domain RD08_RS18460 IPR005709 Ribosomal protein S4, bacterial-type RD08_RS18460 IPR018079 Ribosomal protein S4, conserved site RD08_RS18460 IPR022801 Ribosomal protein S4/S9 RD08_RS18465 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain RD08_RS18465 IPR011260 RNA polymerase, alpha subunit, C-terminal RD08_RS18465 IPR011262 DNA-directed RNA polymerase, insert domain RD08_RS18465 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RD08_RS18465 IPR011773 DNA-directed RNA polymerase, alpha subunit RD08_RS18470 IPR000456 Ribosomal protein L17 RD08_RS18480 IPR004323 Divalent ion tolerance protein, CutA RD08_RS18480 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD08_RS18485 IPR003834 Cytochrome c assembly protein, transmembrane domain RD08_RS18485 IPR012336 Thioredoxin-like fold RD08_RS18485 IPR017937 Thioredoxin, conserved site RD08_RS18485 IPR022910 Thiol:disulphide interchange protein DsbD RD08_RS18485 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RD08_RS18490 IPR000620 Drug/metabolite transporter RD08_RS18495 IPR001731 Porphobilinogen synthase RD08_RS18495 IPR013785 Aldolase-type TIM barrel RD08_RS18495 IPR030656 RD08_RS18495 RD08_RS18500 IPR006073 GTP binding domain RD08_RS18500 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RD08_RS18500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18505 IPR009056 Cytochrome c-like domain RD08_RS18505 IPR024167 Cytochrome c4 RD08_RS18510 IPR007816 ResB-like domain RD08_RS18515 IPR002541 Cytochrome c assembly protein RD08_RS18515 IPR017562 Cytochrome c-type biogenesis protein CcsA RD08_RS18520 IPR000183 Ornithine/DAP/Arg decarboxylase RD08_RS18520 IPR002986 Diaminopimelate decarboxylase, LysA RD08_RS18520 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD08_RS18520 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RD08_RS18520 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RD08_RS18520 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RD08_RS18520 IPR029066 PLP-binding barrel RD08_RS18525 IPR002908 Frataxin/CyaY RD08_RS18525 IPR020895 Frataxin conserved site RD08_RS18530 IPR001264 Glycosyl transferase, family 51 RD08_RS18530 IPR001460 Penicillin-binding protein, transpeptidase RD08_RS18530 IPR012338 Beta-lactamase/transpeptidase-like RD08_RS18530 IPR012340 Nucleic acid-binding, OB-fold RD08_RS18530 IPR023346 Lysozyme-like domain RD08_RS18530 IPR031376 RD08_RS18530 RD08_RS18535 IPR000623 Shikimate kinase/Threonine synthase-like 1 RD08_RS18535 IPR023000 Shikimate kinase, conserved site RD08_RS18535 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18535 IPR031322 RD08_RS18535 RD08_RS18540 IPR016037 3-dehydroquinate synthase AroB RD08_RS18540 IPR030960 RD08_RS18540 RD08_RS18540 IPR030963 RD08_RS18540 RD08_RS18545 IPR003607 HD/PDEase domain RD08_RS18545 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase RD08_RS18545 IPR006674 HD domain RD08_RS18545 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RD08_RS18545 IPR026875 Phosphohydrolase-associated domain RD08_RS18550 IPR004045 Glutathione S-transferase, N-terminal RD08_RS18550 IPR010987 Glutathione S-transferase, C-terminal-like RD08_RS18550 IPR012336 Thioredoxin-like fold RD08_RS18555 IPR004602 UvrABC system subunit A RD08_RS18555 IPR013815 ATP-grasp fold, subdomain 1 RD08_RS18555 IPR017871 ABC transporter, conserved site RD08_RS18555 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18560 IPR011701 Major facilitator superfamily RD08_RS18560 IPR020846 Major facilitator superfamily domain RD08_RS18565 IPR000424 Primosome PriB/single-strand DNA-binding RD08_RS18565 IPR011344 Single-stranded DNA-binding protein RD08_RS18565 IPR012340 Nucleic acid-binding, OB-fold RD08_RS18570 IPR000531 TonB-dependent receptor, beta-barrel RD08_RS18570 IPR010105 TonB-dependent siderophore receptor RD08_RS18570 IPR012910 TonB-dependent receptor, plug RD08_RS18575 IPR011051 RmlC-like cupin domain RD08_RS18575 IPR014710 RmlC-like jelly roll fold RD08_RS18575 IPR025979 ChrR-like cupin domain RD08_RS18580 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD08_RS18580 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS18585 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD08_RS18585 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD08_RS18590 IPR005064 Bordetella uptake gene RD08_RS18595 IPR000524 Transcription regulator HTH, GntR RD08_RS18595 IPR011663 UbiC transcription regulator-associated RD08_RS18595 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18595 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS18600 IPR000847 Transcription regulator HTH, LysR RD08_RS18600 IPR005119 LysR, substrate-binding RD08_RS18600 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18605 IPR006680 Amidohydrolase 1 RD08_RS18605 IPR011059 Metal-dependent hydrolase, composite domain RD08_RS18605 IPR032466 RD08_RS18605 RD08_RS18610 IPR005064 Bordetella uptake gene RD08_RS18615 IPR001296 Glycosyl transferase, family 1 RD08_RS18615 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS18620 IPR019647 PhoP regulatory network protein YrbL RD08_RS18625 IPR000847 Transcription regulator HTH, LysR RD08_RS18625 IPR005119 LysR, substrate-binding RD08_RS18625 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18630 IPR015168 SsuA/THI5-like RD08_RS18630 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RD08_RS18635 IPR000515 MetI-like domain RD08_RS18640 IPR003439 ABC transporter-like RD08_RS18640 IPR003593 AAA+ ATPase domain RD08_RS18640 IPR017871 ABC transporter, conserved site RD08_RS18640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18645 IPR006076 FAD dependent oxidoreductase RD08_RS18645 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS18655 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS18655 IPR009057 Homeodomain-like RD08_RS18655 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS18655 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS18660 IPR001465 Malate synthase RD08_RS18660 IPR006253 Malate synthase G RD08_RS18660 IPR011076 Malate synthase-like RD08_RS18660 IPR023310 Malate synthase G, beta sub-domain RD08_RS18665 IPR000524 Transcription regulator HTH, GntR RD08_RS18665 IPR008920 Transcription regulator FadR/GntR, C-terminal RD08_RS18665 IPR011711 GntR, C-terminal RD08_RS18665 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18670 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase RD08_RS18670 IPR016040 NAD(P)-binding domain RD08_RS18670 IPR032095 RD08_RS18670 RD08_RS18675 IPR025421 Protein of unknown function DUF4148 RD08_RS18680 IPR000537 UbiA prenyltransferase family RD08_RS18680 IPR006370 4-hydroxybenzoate polyprenyl transferase RD08_RS18680 IPR030470 RD08_RS18680 RD08_RS18680 IPR031103 RD08_RS18680 RD08_RS18685 IPR004839 Aminotransferase, class I/classII RD08_RS18685 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS18685 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS18685 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS18690 IPR003018 GAF domain RD08_RS18690 IPR029016 GAF domain-like RD08_RS18695 IPR002220 DapA-like RD08_RS18695 IPR013785 Aldolase-type TIM barrel RD08_RS18695 IPR020624 Dihydrodipicolinate synthetase, conserved site RD08_RS18695 IPR020625 Dihydrodipicolinate synthetase, active site RD08_RS18700 IPR001584 Integrase, catalytic core RD08_RS18700 IPR009057 Homeodomain-like RD08_RS18700 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS18700 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18700 IPR012337 Ribonuclease H-like domain RD08_RS18700 IPR024967 DNA-binding domain, IS481-type RD08_RS18705 IPR007055 BON domain RD08_RS18705 IPR018392 LysM domain RD08_RS18710 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RD08_RS18710 IPR010035 ThiS, thiamine-biosynthesis RD08_RS18710 IPR012675 Beta-grasp domain RD08_RS18710 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD08_RS18715 IPR000073 Alpha/beta hydrolase fold-1 RD08_RS18715 IPR002410 Peptidase S33 RD08_RS18715 IPR005944 Proline iminopeptidase RD08_RS18715 IPR029058 Alpha/Beta hydrolase fold RD08_RS18720 IPR003358 tRNA (guanine-N-7) methyltransferase RD08_RS18720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS18725 IPR000847 Transcription regulator HTH, LysR RD08_RS18725 IPR005119 LysR, substrate-binding RD08_RS18725 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18735 IPR000891 Pyruvate carboxyltransferase RD08_RS18735 IPR013785 Aldolase-type TIM barrel RD08_RS18740 IPR005064 Bordetella uptake gene RD08_RS18750 IPR001584 Integrase, catalytic core RD08_RS18750 IPR009057 Homeodomain-like RD08_RS18750 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS18750 IPR012337 Ribonuclease H-like domain RD08_RS18750 IPR024967 DNA-binding domain, IS481-type RD08_RS18755 IPR000524 Transcription regulator HTH, GntR RD08_RS18755 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18755 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS18760 IPR005064 Bordetella uptake gene RD08_RS18765 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS18765 IPR015168 SsuA/THI5-like RD08_RS18770 IPR000524 Transcription regulator HTH, GntR RD08_RS18770 IPR011663 UbiC transcription regulator-associated RD08_RS18770 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18770 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD08_RS18775 IPR000515 MetI-like domain RD08_RS18780 IPR015168 SsuA/THI5-like RD08_RS18785 IPR003439 ABC transporter-like RD08_RS18785 IPR003593 AAA+ ATPase domain RD08_RS18785 IPR017871 ABC transporter, conserved site RD08_RS18785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18790 IPR001753 Crotonase superfamily RD08_RS18790 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS18790 IPR029045 ClpP/crotonase-like domain RD08_RS18795 IPR005064 Bordetella uptake gene RD08_RS18800 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS18800 IPR011032 GroES (chaperonin 10)-like RD08_RS18800 IPR013149 Alcohol dehydrogenase, C-terminal RD08_RS18800 IPR013154 Alcohol dehydrogenase GroES-like RD08_RS18800 IPR016040 NAD(P)-binding domain RD08_RS18800 IPR020843 Polyketide synthase, enoylreductase RD08_RS18805 IPR003673 CoA-transferase family III RD08_RS18805 IPR023606 CoA-transferase family III domain RD08_RS18810 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS18810 IPR009057 Homeodomain-like RD08_RS18810 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS18810 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS18815 IPR000086 NUDIX hydrolase domain RD08_RS18815 IPR015376 Zinc ribbon, NADH pyrophosphatase RD08_RS18815 IPR015797 NUDIX hydrolase domain-like RD08_RS18815 IPR020084 NUDIX hydrolase, conserved site RD08_RS18820 IPR000951 Phthalate dioxygenase reductase RD08_RS18820 IPR001041 2Fe-2S ferredoxin-type domain RD08_RS18820 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD08_RS18820 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD08_RS18820 IPR008333 Oxidoreductase, FAD-binding domain RD08_RS18820 IPR012675 Beta-grasp domain RD08_RS18820 IPR017938 Riboflavin synthase-like beta-barrel RD08_RS18825 IPR000120 Amidase RD08_RS18825 IPR023631 Amidase signature domain RD08_RS18830 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS18830 IPR016040 NAD(P)-binding domain RD08_RS18835 IPR000847 Transcription regulator HTH, LysR RD08_RS18835 IPR005119 LysR, substrate-binding RD08_RS18835 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18840 IPR000709 Leu/Ile/Val-binding protein RD08_RS18840 IPR028081 Leucine-binding protein domain RD08_RS18840 IPR028082 Periplasmic binding protein-like I RD08_RS18845 IPR009499 Protein of unknown function DUF1116 RD08_RS18845 IPR024033 Uncharacterised domain, YlbE RD08_RS18850 IPR003439 ABC transporter-like RD08_RS18850 IPR003593 AAA+ ATPase domain RD08_RS18850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS18850 IPR032823 RD08_RS18850 RD08_RS18855 IPR001851 ABC transporter, permease RD08_RS18860 IPR001851 ABC transporter, permease RD08_RS18870 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD08_RS18870 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD08_RS18880 IPR011213 Nicotinic acid mononucleotide biosynthesis protein RD08_RS18880 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18880 IPR015797 NUDIX hydrolase domain-like RD08_RS18885 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RD08_RS18885 IPR004393 Nicotinate-nucleotide pyrophosphorylase RD08_RS18885 IPR013785 Aldolase-type TIM barrel RD08_RS18885 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal RD08_RS18885 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RD08_RS18890 IPR001584 Integrase, catalytic core RD08_RS18890 IPR009057 Homeodomain-like RD08_RS18890 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS18890 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS18890 IPR012337 Ribonuclease H-like domain RD08_RS18890 IPR024967 DNA-binding domain, IS481-type RD08_RS18895 IPR001296 Glycosyl transferase, family 1 RD08_RS18895 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD08_RS18900 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD08_RS18900 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD08_RS18900 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD08_RS18900 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD08_RS18900 IPR016040 NAD(P)-binding domain RD08_RS18900 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD08_RS18900 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RD08_RS18905 IPR011701 Major facilitator superfamily RD08_RS18905 IPR020846 Major facilitator superfamily domain RD08_RS18910 IPR001451 Bacterial transferase hexapeptide repeat RD08_RS18910 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RD08_RS18910 IPR011004 Trimeric LpxA-like RD08_RS18910 IPR018357 Hexapeptide transferase, conserved site RD08_RS18910 IPR025877 MobA-like NTP transferase domain RD08_RS18910 IPR029044 Nucleotide-diphospho-sugar transferases RD08_RS18920 IPR008816 Glycine zipper 2TM domain RD08_RS18925 IPR022191 Protein of unknown function DUF3717 RD08_RS18930 IPR003782 Copper chaperone SCO1/SenC RD08_RS18930 IPR012336 Thioredoxin-like fold RD08_RS18935 IPR000537 UbiA prenyltransferase family RD08_RS18935 IPR006369 Protohaem IX farnesyltransferase RD08_RS18940 IPR003780 COX15/CtaA family RD08_RS18945 IPR012336 Thioredoxin-like fold RD08_RS18950 IPR002994 Surfeit locus 1/Shy1 RD08_RS18955 IPR021313 Protein of unknown function DUF2909 RD08_RS18960 IPR000298 Cytochrome c oxidase subunit III domain RD08_RS18960 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD08_RS18960 IPR024791 Cytochrome c oxidase subunit III RD08_RS18965 IPR021344 Protein of unknown function DUF2970 RD08_RS18975 IPR000883 Cytochrome c oxidase subunit I RD08_RS18975 IPR014241 Cytochrome c oxidase, subunit I bacterial type RD08_RS18975 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD08_RS18975 IPR023616 Cytochrome c oxidase, subunit I domain RD08_RS18980 IPR001505 Copper centre Cu(A) RD08_RS18980 IPR002429 Cytochrome c oxidase subunit II C-terminal RD08_RS18980 IPR008972 Cupredoxin RD08_RS18980 IPR009056 Cytochrome c-like domain RD08_RS18980 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RD08_RS18980 IPR014222 Cytochrome c oxidase, subunit II RD08_RS18985 IPR000086 NUDIX hydrolase domain RD08_RS18985 IPR015797 NUDIX hydrolase domain-like RD08_RS18990 IPR000595 Cyclic nucleotide-binding domain RD08_RS18990 IPR006153 Cation/H+ exchanger RD08_RS18990 IPR014710 RmlC-like jelly roll fold RD08_RS18990 IPR018422 Cation/H+ exchanger, CPA1 family RD08_RS18990 IPR018490 Cyclic nucleotide-binding-like RD08_RS18995 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD08_RS18995 IPR013622 Calcineurin-like phosphoesterase C-terminal RD08_RS18995 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RD08_RS18995 IPR029052 Metallo-dependent phosphatase-like RD08_RS19000 IPR000943 RNA polymerase sigma-70 RD08_RS19000 IPR007627 RNA polymerase sigma-70 region 2 RD08_RS19000 IPR007630 RNA polymerase sigma-70 region 4 RD08_RS19000 IPR009042 RNA polymerase sigma-70 region 1.2 RD08_RS19000 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS19000 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RD08_RS19000 IPR013324 RNA polymerase sigma factor, region 3/4 RD08_RS19000 IPR013325 RNA polymerase sigma factor, region 2 RD08_RS19000 IPR014284 RNA polymerase sigma-70 like domain RD08_RS19000 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RD08_RS19010 IPR000801 Putative esterase RD08_RS19010 IPR014186 S-formylglutathione hydrolase RD08_RS19010 IPR029058 Alpha/Beta hydrolase fold RD08_RS19015 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD08_RS19015 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD08_RS19015 IPR011032 GroES (chaperonin 10)-like RD08_RS19015 IPR013149 Alcohol dehydrogenase, C-terminal RD08_RS19015 IPR013154 Alcohol dehydrogenase GroES-like RD08_RS19015 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase RD08_RS19015 IPR016040 NAD(P)-binding domain RD08_RS19015 IPR020843 Polyketide synthase, enoylreductase RD08_RS19020 IPR002686 Transposase IS200-like RD08_RS19025 IPR002489 Glutamate synthase, alpha subunit, C-terminal RD08_RS19025 IPR002932 Glutamate synthase domain RD08_RS19025 IPR006982 Glutamate synthase, central-N RD08_RS19025 IPR013785 Aldolase-type TIM barrel RD08_RS19025 IPR017932 Glutamine amidotransferase type 2 domain RD08_RS19025 IPR029055 Nucleophile aminohydrolases, N-terminal RD08_RS19030 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 RD08_RS19030 IPR009051 Alpha-helical ferredoxin RD08_RS19030 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD08_RS19030 IPR028261 Dihydroprymidine dehydrogenase domain II RD08_RS19035 IPR005618 Outer membrane protein, OmpW RD08_RS19035 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RD08_RS19040 IPR005064 Bordetella uptake gene RD08_RS19045 IPR003439 ABC transporter-like RD08_RS19045 IPR003593 AAA+ ATPase domain RD08_RS19045 IPR017871 ABC transporter, conserved site RD08_RS19045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19050 IPR003453 Permease domain RD08_RS19050 IPR030802 RD08_RS19050 RD08_RS19055 IPR003399 Mammalian cell entry-related RD08_RS19055 IPR030970 RD08_RS19055 RD08_RS19060 IPR007428 VacJ-like lipoprotein RD08_RS19065 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RD08_RS19065 IPR023094 Toluene tolerance protein, alpha-helical RD08_RS19065 IPR032710 RD08_RS19065 RD08_RS19070 IPR003439 ABC transporter-like RD08_RS19070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19075 IPR000412 ABC-2 transporter RD08_RS19075 IPR013525 ABC-2 type transporter RD08_RS19080 IPR002634 BolA protein RD08_RS19085 IPR001986 Enolpyruvate transferase domain RD08_RS19085 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RD08_RS19085 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RD08_RS19090 IPR001348 ATP phosphoribosyltransferase HisG RD08_RS19090 IPR013820 ATP phosphoribosyltransferase, catalytic domain RD08_RS19090 IPR018198 ATP phosphoribosyltransferase, conserved site RD08_RS19090 IPR024893 ATP phosphoribosyltransferase HisG, short form RD08_RS19095 IPR001692 Histidinol dehydrogenase, conserved site RD08_RS19095 IPR012131 Histidinol dehydrogenase RD08_RS19095 IPR016161 Aldehyde/histidinol dehydrogenase RD08_RS19095 IPR022695 Histidinol dehydrogenase, monofunctional RD08_RS19100 IPR004839 Aminotransferase, class I/classII RD08_RS19100 IPR005861 Histidinol-phosphate aminotransferase family RD08_RS19100 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS19100 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS19100 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS19105 IPR000807 Imidazoleglycerol-phosphate dehydratase RD08_RS19105 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RD08_RS19105 IPR020568 Ribosomal protein S5 domain 2-type fold RD08_RS19110 IPR010139 Imidazole glycerol phosphate synthase, subunit H RD08_RS19110 IPR017926 Glutamine amidotransferase RD08_RS19110 IPR029062 Class I glutamine amidotransferase-like RD08_RS19115 IPR006062 Histidine biosynthesis RD08_RS19115 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA RD08_RS19115 IPR011060 Ribulose-phosphate binding barrel RD08_RS19115 IPR013785 Aldolase-type TIM barrel RD08_RS19115 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RD08_RS19120 IPR004651 Histidine biosynthesis, HisF RD08_RS19120 IPR006062 Histidine biosynthesis RD08_RS19120 IPR011060 Ribulose-phosphate binding barrel RD08_RS19120 IPR013785 Aldolase-type TIM barrel RD08_RS19125 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RD08_RS19125 IPR026660 Phosphoribosyl-AMP cyclohydrolase RD08_RS19130 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase RD08_RS19130 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like RD08_RS19135 IPR001310 Histidine triad (HIT) protein RD08_RS19135 IPR011146 HIT-like domain RD08_RS19135 IPR019808 Histidine triad, conserved site RD08_RS19140 IPR003369 Sec-independent protein translocase protein TatA/B/E RD08_RS19140 IPR006312 Sec-independent protein translocase protein TatA/E RD08_RS19145 IPR003369 Sec-independent protein translocase protein TatA/B/E RD08_RS19145 IPR003998 Twin-arginine translocation protein TatB-like RD08_RS19145 IPR018448 Twin-arginine translocation protein TatB RD08_RS19150 IPR002033 Sec-independent periplasmic protein translocase TatC RD08_RS19155 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS19155 IPR001584 Integrase, catalytic core RD08_RS19155 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS19155 IPR012337 Ribonuclease H-like domain RD08_RS19160 IPR005064 Bordetella uptake gene RD08_RS19165 IPR003898 Bordetella pertussis toxin A RD08_RS19170 IPR003899 Bordetella pertussis toxin B RD08_RS19170 IPR005138 Aerolysin/Pertussis toxin APT RD08_RS19170 IPR008992 Enterotoxin RD08_RS19170 IPR016187 C-type lectin fold RD08_RS19170 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD08_RS19175 IPR008992 Enterotoxin RD08_RS19175 IPR015355 Pertussis toxin, subunit S4 RD08_RS19180 IPR008992 Enterotoxin RD08_RS19180 IPR015356 Pertussis toxin, subunit S5 RD08_RS19185 IPR003899 Bordetella pertussis toxin B RD08_RS19185 IPR005138 Aerolysin/Pertussis toxin APT RD08_RS19185 IPR008992 Enterotoxin RD08_RS19185 IPR016187 C-type lectin fold RD08_RS19185 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD08_RS19190 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RD08_RS19195 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RD08_RS19200 IPR004346 CagE, TrbE, VirB component of type IV transporter system RD08_RS19200 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RD08_RS19200 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19205 IPR007688 Conjugal transfer, TrbL/VirB6 RD08_RS19215 IPR007430 Bacterial virulence protein VirB8 RD08_RS19215 IPR026264 Type IV secretion system protein VirB8/PtlE RD08_RS19215 IPR032710 RD08_RS19215 RD08_RS19220 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RD08_RS19220 IPR014148 P-type conjugative transfer protein VirB9 RD08_RS19225 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RD08_RS19230 IPR001482 Type II secretion system protein E RD08_RS19230 IPR014155 Type IV secretion system protein VirB11 RD08_RS19230 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD08_RS19230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19240 IPR000620 Drug/metabolite transporter RD08_RS19245 IPR009057 Homeodomain-like RD08_RS19245 IPR018060 DNA binding HTH domain, AraC-type RD08_RS19245 IPR018062 HTH domain AraC-type, conserved site RD08_RS19250 IPR010652 Protein of unknown function DUF1232 RD08_RS19250 IPR016983 Uncharacterised conserved protein UCP031804 RD08_RS19255 IPR021296 Protein of unknown function DUF2868 RD08_RS19260 IPR006073 GTP binding domain RD08_RS19260 IPR021871 Protein of unknown function DUF3482 RD08_RS19260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19265 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS19265 IPR030678 RD08_RS19265 RD08_RS19270 IPR000515 MetI-like domain RD08_RS19275 IPR000515 MetI-like domain RD08_RS19275 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD08_RS19280 IPR003439 ABC transporter-like RD08_RS19280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19285 IPR001584 Integrase, catalytic core RD08_RS19285 IPR009057 Homeodomain-like RD08_RS19285 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS19285 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS19285 IPR012337 Ribonuclease H-like domain RD08_RS19285 IPR024967 DNA-binding domain, IS481-type RD08_RS19290 IPR002813 Arginine biosynthesis protein ArgJ RD08_RS19290 IPR016117 ArgJ-like domain RD08_RS19295 IPR008533 Domain of unknown function DUF815 RD08_RS19295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19300 IPR000086 NUDIX hydrolase domain RD08_RS19300 IPR003733 Thiamine phosphate synthase RD08_RS19300 IPR013785 Aldolase-type TIM barrel RD08_RS19300 IPR015797 NUDIX hydrolase domain-like RD08_RS19300 IPR020084 NUDIX hydrolase, conserved site RD08_RS19300 IPR020476 NUDIX hydrolase RD08_RS19300 IPR022998 Thiamin phosphate synthase superfamily RD08_RS19305 IPR001584 Integrase, catalytic core RD08_RS19305 IPR009057 Homeodomain-like RD08_RS19305 IPR012337 Ribonuclease H-like domain RD08_RS19305 IPR024967 DNA-binding domain, IS481-type RD08_RS19310 IPR001584 Integrase, catalytic core RD08_RS19310 IPR009057 Homeodomain-like RD08_RS19310 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS19310 IPR012337 Ribonuclease H-like domain RD08_RS19310 IPR024967 DNA-binding domain, IS481-type RD08_RS19315 IPR001584 Integrase, catalytic core RD08_RS19315 IPR009057 Homeodomain-like RD08_RS19315 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS19315 IPR012337 Ribonuclease H-like domain RD08_RS19315 IPR024967 DNA-binding domain, IS481-type RD08_RS19320 IPR003423 Outer membrane efflux protein RD08_RS19320 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD08_RS19325 IPR001036 Acriflavin resistance protein RD08_RS19325 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD08_RS19330 IPR001036 Acriflavin resistance protein RD08_RS19330 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD08_RS19335 IPR006143 RND efflux pump, membrane fusion protein RD08_RS19335 IPR022824 Multidrug resistance protein MdtA RD08_RS19340 IPR009777 Cell division protein ZapD RD08_RS19340 IPR027462 Z ring-associated protein D, C-terminal domain RD08_RS19345 IPR001977 Dephospho-CoA kinase RD08_RS19345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19350 IPR000045 Prepilin type IV endopeptidase, peptidase domain RD08_RS19350 IPR010627 Peptidase A24A, N-terminal RD08_RS19350 IPR014032 Peptidase A24A, prepilin type IV, bacterial RD08_RS19355 IPR007298 Copper resistance lipoprotein NlpE RD08_RS19360 IPR000792 Transcription regulator LuxR, C-terminal RD08_RS19360 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS19360 IPR016032 Signal transduction response regulator, C-terminal effector RD08_RS19365 IPR003721 Pantoate-beta-alanine ligase RD08_RS19365 IPR004821 Cytidyltransferase-like domain RD08_RS19365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD08_RS19370 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA RD08_RS19375 IPR021853 Protein of unknown function DUF3460 RD08_RS19380 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD08_RS19380 IPR011701 Major facilitator superfamily RD08_RS19380 IPR020846 Major facilitator superfamily domain RD08_RS19385 IPR000577 RD08_RS19385 RD08_RS19385 IPR005999 Glycerol kinase RD08_RS19385 IPR018483 Carbohydrate kinase, FGGY, conserved site RD08_RS19385 IPR018484 Carbohydrate kinase, FGGY, N-terminal RD08_RS19385 IPR018485 Carbohydrate kinase, FGGY, C-terminal RD08_RS19390 IPR005265 Uncharacterised protein family UPF0093 RD08_RS19395 IPR005064 Bordetella uptake gene RD08_RS19400 IPR003439 ABC transporter-like RD08_RS19400 IPR003593 AAA+ ATPase domain RD08_RS19400 IPR017871 ABC transporter, conserved site RD08_RS19400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19400 IPR030679 RD08_RS19400 RD08_RS19405 IPR000515 MetI-like domain RD08_RS19405 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS19410 IPR000515 MetI-like domain RD08_RS19410 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD08_RS19415 IPR001638 Extracellular solute-binding protein, family 3 RD08_RS19415 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD08_RS19420 IPR003439 ABC transporter-like RD08_RS19420 IPR003593 AAA+ ATPase domain RD08_RS19420 IPR017871 ABC transporter, conserved site RD08_RS19420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19425 IPR003838 Permease FtsX-like RD08_RS19425 IPR004513 ABC transporter, cell division protein FtsX RD08_RS19430 IPR005659 Chemoreceptor glutamine deamidase CheD RD08_RS19430 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD08_RS19435 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD08_RS19435 IPR029061 Thiamin diphosphate-binding fold RD08_RS19440 IPR000445 Helix-hairpin-helix motif RD08_RS19440 IPR003265 HhH-GPD domain RD08_RS19440 IPR004035 Endonuclease III, iron-sulphur binding site RD08_RS19440 IPR004036 Endonuclease III-like, conserved site-2 RD08_RS19440 IPR005760 A/G-specific adenine glycosylase MutY RD08_RS19440 IPR011257 DNA glycosylase RD08_RS19440 IPR015797 NUDIX hydrolase domain-like RD08_RS19440 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD08_RS19440 IPR029119 MutY, C-terminal RD08_RS19445 IPR001387 Cro/C1-type helix-turn-helix domain RD08_RS19445 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS19450 IPR013216 Methyltransferase type 11 RD08_RS19450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD08_RS19455 IPR001584 Integrase, catalytic core RD08_RS19455 IPR009057 Homeodomain-like RD08_RS19455 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS19455 IPR012337 Ribonuclease H-like domain RD08_RS19455 IPR024967 DNA-binding domain, IS481-type RD08_RS19460 IPR003673 CoA-transferase family III RD08_RS19460 IPR023606 CoA-transferase family III domain RD08_RS19465 IPR003673 CoA-transferase family III RD08_RS19465 IPR023606 CoA-transferase family III domain RD08_RS19470 IPR005656 MmgE/PrpD RD08_RS19475 IPR005064 Bordetella uptake gene RD08_RS19480 IPR001753 Crotonase superfamily RD08_RS19480 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS19480 IPR029045 ClpP/crotonase-like domain RD08_RS19485 IPR000415 Nitroreductase-like RD08_RS19485 IPR029479 Nitroreductase RD08_RS19490 IPR001647 DNA-binding HTH domain, TetR-type RD08_RS19490 IPR009057 Homeodomain-like RD08_RS19490 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD08_RS19490 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD08_RS19495 IPR000891 Pyruvate carboxyltransferase RD08_RS19495 IPR013785 Aldolase-type TIM barrel RD08_RS19500 IPR001753 Crotonase superfamily RD08_RS19500 IPR014748 Crontonase, C-terminal RD08_RS19500 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD08_RS19500 IPR029045 ClpP/crotonase-like domain RD08_RS19505 IPR003673 CoA-transferase family III RD08_RS19505 IPR023606 CoA-transferase family III domain RD08_RS19510 IPR005064 Bordetella uptake gene RD08_RS19515 IPR001584 Integrase, catalytic core RD08_RS19515 IPR009057 Homeodomain-like RD08_RS19515 IPR010982 Lambda repressor-like, DNA-binding domain RD08_RS19515 IPR012337 Ribonuclease H-like domain RD08_RS19515 IPR024967 DNA-binding domain, IS481-type RD08_RS19520 IPR002226 Catalase haem-binding site RD08_RS19520 IPR010582 Catalase immune-responsive domain RD08_RS19520 IPR011614 Catalase core domain RD08_RS19520 IPR018028 Catalase, mono-functional, haem-containing RD08_RS19520 IPR020835 Catalase-like domain RD08_RS19520 IPR024708 Catalase active site RD08_RS19520 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 RD08_RS19525 IPR000515 MetI-like domain RD08_RS19530 IPR003439 ABC transporter-like RD08_RS19530 IPR003593 AAA+ ATPase domain RD08_RS19530 IPR017871 ABC transporter, conserved site RD08_RS19530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19540 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD08_RS19545 IPR002933 Peptidase M20 RD08_RS19545 IPR011650 Peptidase M20, dimerisation domain RD08_RS19545 IPR017439 Amidohydrolase RD08_RS19550 IPR003439 ABC transporter-like RD08_RS19550 IPR003593 AAA+ ATPase domain RD08_RS19550 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS19550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19555 IPR003439 ABC transporter-like RD08_RS19555 IPR003593 AAA+ ATPase domain RD08_RS19555 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD08_RS19555 IPR017871 ABC transporter, conserved site RD08_RS19555 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19560 IPR000515 MetI-like domain RD08_RS19560 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD08_RS19565 IPR000515 MetI-like domain RD08_RS19570 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD08_RS19570 IPR030678 RD08_RS19570 RD08_RS19575 IPR004520 tRNA modification GTPase MnmE RD08_RS19575 IPR005225 Small GTP-binding protein domain RD08_RS19575 IPR006073 GTP binding domain RD08_RS19575 IPR018948 GTP-binding protein TrmE, N-terminal RD08_RS19575 IPR025867 tRNA modification GTPase MnmE C-terminal domain RD08_RS19575 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD08_RS19575 IPR027368 tRNA modification GTPase MnmE domain 2 RD08_RS19575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD08_RS19580 IPR011701 Major facilitator superfamily RD08_RS19580 IPR020846 Major facilitator superfamily domain RD08_RS19585 IPR001789 Signal transduction response regulator, receiver domain RD08_RS19585 IPR001867 Signal transduction response regulator, C-terminal RD08_RS19585 IPR011006 CheY-like superfamily RD08_RS19585 IPR011991 Winged helix-turn-helix DNA-binding domain RD08_RS19590 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD08_RS19590 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD08_RS19590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD08_RS19590 IPR013727 Two-component sensor kinase N-terminal RD08_RS19595 IPR005064 Bordetella uptake gene RD08_RS19600 IPR009936 Protein of unknown function DUF1468 RD08_RS19605 IPR002823 Protein of unknown function DUF112, transmembrane RD08_RS19610 IPR004839 Aminotransferase, class I/classII RD08_RS19610 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD08_RS19610 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD08_RS19610 IPR015424 Pyridoxal phosphate-dependent transferase RD08_RS19615 IPR002059 Cold-shock protein, DNA-binding RD08_RS19615 IPR011129 Cold shock protein RD08_RS19615 IPR012156 Cold shock, CspA RD08_RS19615 IPR012340 Nucleic acid-binding, OB-fold RD08_RS19615 IPR019844 Cold-shock conserved site