RD08_RS00005 SM01228 RD08_RS00005 RD08_RS00025 SM00470 ParB-like nuclease domain RD08_RS00030 SM00870 RD08_RS00030 RD08_RS00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RD08_RS00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RD08_RS00075 SM00649 Ribosomal protein L11/L12 RD08_RS00100 SM00663 RNA polymerase I subunit A N-terminus RD08_RS00130 SM00448 cheY-homologous receiver domain RD08_RS00130 SM00862 Transcriptional regulatory protein, C terminal RD08_RS00200 SM00563 Phosphate acyltransferases RD08_RS00265 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS00265 SM00895 RD08_RS00265 RD08_RS00295 SM00869 Autotransporter beta-domain RD08_RS00315 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS00320 SM00882 Coenzyme A transferase RD08_RS00325 SM00882 Coenzyme A transferase RD08_RS00375 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS00375 SM00895 RD08_RS00375 RD08_RS00470 SM00450 Rhodanese Homology Domain RD08_RS00515 SM00487 DEAD-like helicases superfamily RD08_RS00515 SM00490 helicase superfamily c-terminal domain RD08_RS00530 SM00382 ATPases associated with a variety of cellular activities RD08_RS00555 SM00978 RD08_RS00555 RD08_RS00565 SM00448 cheY-homologous receiver domain RD08_RS00565 SM00862 Transcriptional regulatory protein, C terminal RD08_RS00570 SM00091 PAS domain RD08_RS00570 SM00387 Histidine kinase-like ATPases RD08_RS00570 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS00575 SM00448 cheY-homologous receiver domain RD08_RS00575 SM00862 Transcriptional regulatory protein, C terminal RD08_RS00580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS00580 SM00387 Histidine kinase-like ATPases RD08_RS00580 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS00605 SM00796 Allophanate hydrolase subunit 1 RD08_RS00610 SM00797 Allophanate hydrolase subunit 2 RD08_RS00620 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS00655 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS00655 SM00895 RD08_RS00655 RD08_RS00710 SM00917 LeuA allosteric (dimerisation) domain RD08_RS00745 SM00382 ATPases associated with a variety of cellular activities RD08_RS00760 SM00382 ATPases associated with a variety of cellular activities RD08_RS00795 SM00836 DALR anticodon binding domain RD08_RS00795 SM01016 Arginyl tRNA synthetase N terminal dom RD08_RS00840 SM00729 Elongator protein 3, MiaB family, Radical SAM RD08_RS00860 SM00936 Penicillin-binding protein 5, C-terminal domain RD08_RS00885 SM00382 ATPases associated with a variety of cellular activities RD08_RS00985 SM00382 ATPases associated with a variety of cellular activities RD08_RS00985 SM00962 SRP54-type protein, GTPase domain RD08_RS00985 SM00963 SRP54-type protein, helical bundle domain RD08_RS01000 SM00644 RD08_RS01000 RD08_RS01010 SM00387 Histidine kinase-like ATPases RD08_RS01100 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS01115 SM00382 ATPases associated with a variety of cellular activities RD08_RS01160 SM00421 helix_turn_helix, Lux Regulon RD08_RS01200 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS01200 SM00895 RD08_RS01200 RD08_RS01240 SM00382 ATPases associated with a variety of cellular activities RD08_RS01255 SM00853 MutL C terminal dimerisation domain RD08_RS01255 SM01340 RD08_RS01255 RD08_RS01265 SM00646 RD08_RS01265 RD08_RS01345 SM00382 ATPases associated with a variety of cellular activities RD08_RS01350 SM00382 ATPases associated with a variety of cellular activities RD08_RS01430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD08_RS01460 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS01470 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS01520 SM00347 helix_turn_helix multiple antibiotic resistance protein RD08_RS01545 SM00382 ATPases associated with a variety of cellular activities RD08_RS01550 SM00382 ATPases associated with a variety of cellular activities RD08_RS01620 SM00732 Likely ribonuclease with RNase H fold. RD08_RS01635 SM00563 Phosphate acyltransferases RD08_RS01685 SM00849 Metallo-beta-lactamase superfamily RD08_RS01710 SM00267 diguanylate cyclase RD08_RS01735 SM00382 ATPases associated with a variety of cellular activities RD08_RS01755 SM00965 Secretin and TonB N terminus short domain RD08_RS01800 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS01800 SM00895 RD08_RS01800 RD08_RS01815 SM01236 RD08_RS01815 RD08_RS01835 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS01860 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD08_RS01875 SM00845 GatB domain RD08_RS01950 SM00749 bacterial OsmY and nodulation domain RD08_RS02015 SM00450 Rhodanese Homology Domain RD08_RS02020 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS02060 SM00450 Rhodanese Homology Domain RD08_RS02155 SM00479 RD08_RS02155 RD08_RS02230 SM00829 Enoylreductase RD08_RS02240 SM00881 CoA binding domain RD08_RS02270 SM00344 helix_turn_helix ASNC type RD08_RS02295 SM00881 CoA binding domain RD08_RS02305 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS02335 SM00937 RD08_RS02335 RD08_RS02365 SM01092 CO dehydrogenase flavoprotein C-terminal domain RD08_RS02375 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD08_RS02430 SM00382 ATPases associated with a variety of cellular activities RD08_RS02450 SM00116 Domain in cystathionine beta-synthase and other proteins. RD08_RS02480 SM00834 Putative regulatory protein RD08_RS02500 SM00155 Phospholipase D. Active site motifs. RD08_RS02540 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS02660 SM00382 ATPases associated with a variety of cellular activities RD08_RS02685 SM00487 DEAD-like helicases superfamily RD08_RS02685 SM00490 helicase superfamily c-terminal domain RD08_RS02705 SM00382 ATPases associated with a variety of cellular activities RD08_RS02765 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD08_RS02775 SM00905 Dihydroneopterin aldolase RD08_RS02805 SM00925 MltA specific insert domain RD08_RS02885 SM00903 Flavin reductase like domain RD08_RS02910 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS02910 SM00866 RD08_RS02910 RD08_RS02945 SM00382 ATPases associated with a variety of cellular activities RD08_RS03030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS03030 SM00387 Histidine kinase-like ATPases RD08_RS03035 SM00448 cheY-homologous receiver domain RD08_RS03035 SM00862 Transcriptional regulatory protein, C terminal RD08_RS03075 SM00257 Lysin motif RD08_RS03080 SM00849 Metallo-beta-lactamase superfamily RD08_RS03155 SM00822 RD08_RS03155 RD08_RS03165 SM00382 ATPases associated with a variety of cellular activities RD08_RS03170 SM00382 ATPases associated with a variety of cellular activities RD08_RS03250 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS03250 SM00866 RD08_RS03250 RD08_RS03270 SM00422 helix_turn_helix, mercury resistance RD08_RS03300 SM00988 UreE urease accessory protein, N-terminal domain RD08_RS03360 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS03390 SM00984 UDP binding domain RD08_RS03450 SM00448 cheY-homologous receiver domain RD08_RS03450 SM00862 Transcriptional regulatory protein, C terminal RD08_RS03455 SM00387 Histidine kinase-like ATPases RD08_RS03455 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS03490 SM00849 Metallo-beta-lactamase superfamily RD08_RS03495 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RD08_RS03495 SM01232 RD08_RS03495 RD08_RS03500 SM00028 Tetratricopeptide repeats RD08_RS03520 SM01400 RD08_RS03520 RD08_RS03605 SM00869 Autotransporter beta-domain RD08_RS03615 SM00862 Transcriptional regulatory protein, C terminal RD08_RS03650 SM00422 helix_turn_helix, mercury resistance RD08_RS03650 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS03690 SM00344 helix_turn_helix ASNC type RD08_RS03690 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS03740 SM00382 ATPases associated with a variety of cellular activities RD08_RS03745 SM00155 Phospholipase D. Active site motifs. RD08_RS03755 SM00986 Uracil DNA glycosylase superfamily RD08_RS03755 SM00987 UreE urease accessory protein, C-terminal domain RD08_RS03760 SM00487 DEAD-like helicases superfamily RD08_RS03760 SM00490 helicase superfamily c-terminal domain RD08_RS03815 SM00996 S-adenosyl-L-homocysteine hydrolase RD08_RS03815 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD08_RS03885 SM00382 ATPases associated with a variety of cellular activities RD08_RS03900 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD08_RS03915 SM00382 ATPases associated with a variety of cellular activities RD08_RS03915 SM01086 C-terminal, D2-small domain, of ClpB protein RD08_RS04020 SM00344 helix_turn_helix ASNC type RD08_RS04055 SM00151 SWI complex, BAF60b domains RD08_RS04070 SM00382 ATPases associated with a variety of cellular activities RD08_RS04140 SM00842 Cell division protein FtsA RD08_RS04145 SM00864 Tubulin/FtsZ family, GTPase domain RD08_RS04145 SM00865 Tubulin/FtsZ family, C-terminal domain RD08_RS04165 SM00957 SecA DEAD-like domain RD08_RS04165 SM00958 SecA preprotein cross-linking domain RD08_RS04195 SM00344 helix_turn_helix ASNC type RD08_RS04225 SM00955 RD08_RS04225 RD08_RS04255 SM00878 Biotin carboxylase C-terminal domain RD08_RS04335 SM00344 helix_turn_helix ASNC type RD08_RS04365 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS04365 SM00895 RD08_RS04365 RD08_RS04375 SM00487 DEAD-like helicases superfamily RD08_RS04375 SM00490 helicase superfamily c-terminal domain RD08_RS04395 SM00382 ATPases associated with a variety of cellular activities RD08_RS04435 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD08_RS04465 SM00363 S4 RNA-binding domain RD08_RS04560 SM00387 Histidine kinase-like ATPases RD08_RS04565 SM00448 cheY-homologous receiver domain RD08_RS04590 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD08_RS04640 SM00257 Lysin motif RD08_RS04680 SM00528 Domain in histone-like proteins of HNS family RD08_RS04700 SM00912 haemagglutination activity domain RD08_RS04735 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS04745 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RD08_RS04745 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RD08_RS04815 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS04815 SM00895 RD08_RS04815 RD08_RS04855 SM00382 ATPases associated with a variety of cellular activities RD08_RS04870 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS04905 SM00382 ATPases associated with a variety of cellular activities RD08_RS04930 SM00248 ankyrin repeats RD08_RS04975 SM00344 helix_turn_helix ASNC type RD08_RS05000 SM00382 ATPases associated with a variety of cellular activities RD08_RS05015 SM00829 Enoylreductase RD08_RS05040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD08_RS05065 SM00822 RD08_RS05065 RD08_RS05130 SM00822 RD08_RS05130 RD08_RS05155 SM00422 helix_turn_helix, mercury resistance RD08_RS05185 SM00382 ATPases associated with a variety of cellular activities RD08_RS05225 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS05225 SM00895 RD08_RS05225 RD08_RS05275 SM00382 ATPases associated with a variety of cellular activities RD08_RS05275 SM00930 RD08_RS05275 RD08_RS05325 SM00116 Domain in cystathionine beta-synthase and other proteins. RD08_RS05325 SM00924 MgtE intracellular N domain RD08_RS05350 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS05365 SM00861 Transketolase, pyrimidine binding domain RD08_RS05400 SM00382 ATPases associated with a variety of cellular activities RD08_RS05415 SM00670 Large family of predicted nucleotide-binding domains RD08_RS05500 SM00822 RD08_RS05500 RD08_RS05565 SM00357 Cold shock protein domain RD08_RS05575 SM01359 RD08_RS05575 RD08_RS05575 SM01360 RD08_RS05575 RD08_RS05585 SM00382 ATPases associated with a variety of cellular activities RD08_RS05585 SM01086 C-terminal, D2-small domain, of ClpB protein RD08_RS05630 SM00382 ATPases associated with a variety of cellular activities RD08_RS05635 SM00382 ATPases associated with a variety of cellular activities RD08_RS05655 SM00869 Autotransporter beta-domain RD08_RS05665 SM00938 Nitrogen regulatory protein P-II RD08_RS05735 SM00422 helix_turn_helix, mercury resistance RD08_RS05760 SM00729 Elongator protein 3, MiaB family, Radical SAM RD08_RS05760 SM00876 Biotin and Thiamin Synthesis associated domain RD08_RS05810 SM00852 Probable molybdopterin binding domain RD08_RS05815 SM00852 Probable molybdopterin binding domain RD08_RS05820 SM00729 Elongator protein 3, MiaB family, Radical SAM RD08_RS05855 SM00938 Nitrogen regulatory protein P-II RD08_RS05915 SM00479 RD08_RS05915 RD08_RS06010 SM01211 RD08_RS06010 RD08_RS06015 SM00912 haemagglutination activity domain RD08_RS06030 SM00347 helix_turn_helix multiple antibiotic resistance protein RD08_RS06035 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS06040 SM01007 Class II Aldolase and Adducin N-terminal domain RD08_RS06080 SM01130 RD08_RS06080 RD08_RS06125 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS06135 SM00420 helix_turn_helix, Deoxyribose operon repressor RD08_RS06135 SM01134 RD08_RS06135 RD08_RS06140 SM00382 ATPases associated with a variety of cellular activities RD08_RS06145 SM00382 ATPases associated with a variety of cellular activities RD08_RS06180 SM00344 helix_turn_helix ASNC type RD08_RS06215 SM00421 helix_turn_helix, Lux Regulon RD08_RS06225 SM00869 Autotransporter beta-domain RD08_RS06235 SM00116 Domain in cystathionine beta-synthase and other proteins. RD08_RS06235 SM01240 RD08_RS06235 RD08_RS06245 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS06270 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS06285 SM00382 ATPases associated with a variety of cellular activities RD08_RS06325 SM00849 Metallo-beta-lactamase superfamily RD08_RS06325 SM01027 Beta-Casp domain RD08_RS06345 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS06365 SM00829 Enoylreductase RD08_RS06375 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS06415 SM00382 ATPases associated with a variety of cellular activities RD08_RS06420 SM00354 helix_turn _helix lactose operon repressor RD08_RS06470 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS06505 SM00873 B3/4 domain RD08_RS06505 SM00874 tRNA synthetase B5 domain RD08_RS06505 SM00896 Ferredoxin-fold anticodon binding domain RD08_RS06510 SM00411 bacterial (prokaryotic) histone like domain RD08_RS06515 SM00422 helix_turn_helix, mercury resistance RD08_RS06620 SM00822 RD08_RS06620 RD08_RS06635 SM00382 ATPases associated with a variety of cellular activities RD08_RS06650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS06650 SM00387 Histidine kinase-like ATPases RD08_RS06650 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS06655 SM00448 cheY-homologous receiver domain RD08_RS06655 SM00862 Transcriptional regulatory protein, C terminal RD08_RS06660 SM00382 ATPases associated with a variety of cellular activities RD08_RS06690 SM00881 CoA binding domain RD08_RS06760 SM00858 RD08_RS06760 RD08_RS06770 SM00240 Forkhead associated domain RD08_RS06770 SM00382 ATPases associated with a variety of cellular activities RD08_RS06925 SM00271 DnaJ molecular chaperone homology domain RD08_RS06950 SM00382 ATPases associated with a variety of cellular activities RD08_RS06975 SM01329 RD08_RS06975 RD08_RS06995 SM00448 cheY-homologous receiver domain RD08_RS06995 SM00862 Transcriptional regulatory protein, C terminal RD08_RS07000 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS07045 SM00463 Small MutS-related domain RD08_RS07055 SM00843 RD08_RS07055 RD08_RS07065 SM00382 ATPases associated with a variety of cellular activities RD08_RS07095 SM00267 diguanylate cyclase RD08_RS07120 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS07140 SM01006 Siderophore biosynthesis protein domain RD08_RS07190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RD08_RS07190 SM00267 diguanylate cyclase RD08_RS07210 SM00421 helix_turn_helix, Lux Regulon RD08_RS07210 SM00448 cheY-homologous receiver domain RD08_RS07215 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD08_RS07260 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS07275 SM00382 ATPases associated with a variety of cellular activities RD08_RS07295 SM00834 Putative regulatory protein RD08_RS07310 SM00421 helix_turn_helix, Lux Regulon RD08_RS07340 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS07350 SM01001 AIR carboxylase RD08_RS07365 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS07370 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS07380 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS07380 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD08_RS07390 SM00382 ATPases associated with a variety of cellular activities RD08_RS07475 SM00382 ATPases associated with a variety of cellular activities RD08_RS07485 SM00493 RD08_RS07485 RD08_RS07560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RD08_RS07560 SM00534 ATPase domain of DNA mismatch repair MUTS family RD08_RS07565 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RD08_RS07580 SM01130 RD08_RS07580 RD08_RS07595 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS07595 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD08_RS07605 SM00382 ATPases associated with a variety of cellular activities RD08_RS07610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD08_RS07610 SM00954 Region found in RelA / SpoT proteins RD08_RS07615 SM01409 RD08_RS07615 RD08_RS07620 SM00072 Guanylate kinase homologues. RD08_RS07635 SM00822 RD08_RS07635 RD08_RS07650 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS07685 SM00052 Putative diguanylate phosphodiesterase RD08_RS07685 SM00267 diguanylate cyclase RD08_RS07700 SM00729 Elongator protein 3, MiaB family, Radical SAM RD08_RS07705 SM01230 RD08_RS07705 RD08_RS07710 SM00091 PAS domain RD08_RS07710 SM00387 Histidine kinase-like ATPases RD08_RS07710 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS07715 SM00382 ATPases associated with a variety of cellular activities RD08_RS07715 SM00448 cheY-homologous receiver domain RD08_RS07740 SM00382 ATPases associated with a variety of cellular activities RD08_RS07785 SM00487 DEAD-like helicases superfamily RD08_RS07785 SM00490 helicase superfamily c-terminal domain RD08_RS07830 SM00382 ATPases associated with a variety of cellular activities RD08_RS07855 SM00984 UDP binding domain RD08_RS07905 SM00382 ATPases associated with a variety of cellular activities RD08_RS07910 SM00382 ATPases associated with a variety of cellular activities RD08_RS07960 SM00327 von Willebrand factor (vWF) type A domain RD08_RS07965 SM00028 Tetratricopeptide repeats RD08_RS07965 SM00327 von Willebrand factor (vWF) type A domain RD08_RS08005 SM00421 helix_turn_helix, Lux Regulon RD08_RS08005 SM00448 cheY-homologous receiver domain RD08_RS08010 SM00869 Autotransporter beta-domain RD08_RS08015 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS08120 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD08_RS08135 SM00822 RD08_RS08135 RD08_RS08235 SM00382 ATPases associated with a variety of cellular activities RD08_RS08240 SM00382 ATPases associated with a variety of cellular activities RD08_RS08320 SM00248 ankyrin repeats RD08_RS08325 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS08330 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS08330 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD08_RS08340 SM00382 ATPases associated with a variety of cellular activities RD08_RS08350 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD08_RS08390 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS08390 SM00895 RD08_RS08390 RD08_RS08430 SM00052 Putative diguanylate phosphodiesterase RD08_RS08435 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS08435 SM00073 Histidine Phosphotransfer domain RD08_RS08435 SM00091 PAS domain RD08_RS08435 SM00387 Histidine kinase-like ATPases RD08_RS08435 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS08435 SM00448 cheY-homologous receiver domain RD08_RS08440 SM00421 helix_turn_helix, Lux Regulon RD08_RS08440 SM00448 cheY-homologous receiver domain RD08_RS08445 SM00912 haemagglutination activity domain RD08_RS08540 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS08560 SM01091 Transporter associated domain RD08_RS08580 SM00028 Tetratricopeptide repeats RD08_RS08585 SM00840 RD08_RS08585 RD08_RS08590 SM00478 endonuclease III RD08_RS08705 SM00382 ATPases associated with a variety of cellular activities RD08_RS08720 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS08725 SM00881 CoA binding domain RD08_RS08755 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD08_RS08780 SM00028 Tetratricopeptide repeats RD08_RS08795 SM00347 helix_turn_helix multiple antibiotic resistance protein RD08_RS08805 SM00421 helix_turn_helix, Lux Regulon RD08_RS08850 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS08870 SM00318 Staphylococcal nuclease homologues RD08_RS08890 SM00382 ATPases associated with a variety of cellular activities RD08_RS08895 SM00347 helix_turn_helix multiple antibiotic resistance protein RD08_RS08940 SM00858 RD08_RS08940 RD08_RS08970 SM00028 Tetratricopeptide repeats RD08_RS08985 SM00382 ATPases associated with a variety of cellular activities RD08_RS09015 SM00841 Elongation factor P, C-terminal RD08_RS09015 SM01185 RD08_RS09015 RD08_RS09075 SM00479 RD08_RS09075 RD08_RS09165 SM00869 Autotransporter beta-domain RD08_RS09195 SM01209 RD08_RS09195 RD08_RS09195 SM01210 RD08_RS09195 RD08_RS09260 SM00382 ATPases associated with a variety of cellular activities RD08_RS09280 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS09285 SM01329 RD08_RS09285 RD08_RS09305 SM00347 helix_turn_helix multiple antibiotic resistance protein RD08_RS09320 SM00829 Enoylreductase RD08_RS09335 SM00450 Rhodanese Homology Domain RD08_RS09350 SM00382 ATPases associated with a variety of cellular activities RD08_RS09395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD08_RS09395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS09510 SM00382 ATPases associated with a variety of cellular activities RD08_RS09585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS09585 SM00331 Sigma factor PP2C-like phosphatases RD08_RS09585 SM01049 RD08_RS09585 RD08_RS09595 SM01005 Alanine racemase, C-terminal domain RD08_RS09610 SM00155 Phospholipase D. Active site motifs. RD08_RS09620 SM00869 Autotransporter beta-domain RD08_RS09655 SM00347 helix_turn_helix multiple antibiotic resistance protein RD08_RS09700 SM01207 RD08_RS09700 RD08_RS09715 SM00257 Lysin motif RD08_RS09740 SM00422 helix_turn_helix, mercury resistance RD08_RS09800 SM00749 bacterial OsmY and nodulation domain RD08_RS09860 SM00344 helix_turn_helix ASNC type RD08_RS09885 SM00904 Riboflavin kinase RD08_RS09915 SM00965 Secretin and TonB N terminus short domain RD08_RS09920 SM00382 ATPases associated with a variety of cellular activities RD08_RS09955 SM00869 Autotransporter beta-domain RD08_RS09970 SM00357 Cold shock protein domain RD08_RS09980 SM00357 Cold shock protein domain RD08_RS10000 SM00382 ATPases associated with a variety of cellular activities RD08_RS10000 SM00994 ClpX C4-type zinc finger RD08_RS10000 SM01086 C-terminal, D2-small domain, of ClpB protein RD08_RS10005 SM00382 ATPases associated with a variety of cellular activities RD08_RS10005 SM00464 Found in ATP-dependent protease La (LON) RD08_RS10060 SM00882 Coenzyme A transferase RD08_RS10065 SM00882 Coenzyme A transferase RD08_RS10090 SM00869 Autotransporter beta-domain RD08_RS10105 SM00487 DEAD-like helicases superfamily RD08_RS10105 SM00490 helicase superfamily c-terminal domain RD08_RS10110 SM00226 Low molecular weight phosphatase family RD08_RS10135 SM00271 DnaJ molecular chaperone homology domain RD08_RS10190 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS10190 SM00866 RD08_RS10190 RD08_RS10250 SM00382 ATPases associated with a variety of cellular activities RD08_RS10300 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD08_RS10345 SM00387 Histidine kinase-like ATPases RD08_RS10345 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS10350 SM00448 cheY-homologous receiver domain RD08_RS10365 SM00562 RD08_RS10365 RD08_RS10395 SM00564 beta-propeller repeat RD08_RS10400 SM00382 ATPases associated with a variety of cellular activities RD08_RS10420 SM00244 prohibitin homologues RD08_RS10425 SM00244 prohibitin homologues RD08_RS10435 SM00788 Adenylosuccinate synthetase RD08_RS10450 SM00400 zinc finger RD08_RS10450 SM00493 RD08_RS10450 RD08_RS10450 SM00766 DNA primase DnaG DnaB-binding RD08_RS10495 SM00382 ATPases associated with a variety of cellular activities RD08_RS10600 SM00382 ATPases associated with a variety of cellular activities RD08_RS10640 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS10660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD08_RS10675 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS10675 SM00895 RD08_RS10675 RD08_RS10695 SM00382 ATPases associated with a variety of cellular activities RD08_RS10730 SM00464 Found in ATP-dependent protease La (LON) RD08_RS10740 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS10750 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD08_RS10840 SM00822 RD08_RS10840 RD08_RS11005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD08_RS11005 SM00465 GIY-YIG type nucleases (URI domain) RD08_RS11040 SM00862 Transcriptional regulatory protein, C terminal RD08_RS11060 SM00382 ATPases associated with a variety of cellular activities RD08_RS11100 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS11100 SM00895 RD08_RS11100 RD08_RS11120 SM00382 ATPases associated with a variety of cellular activities RD08_RS11175 SM00411 bacterial (prokaryotic) histone like domain RD08_RS11180 SM00347 helix_turn_helix multiple antibiotic resistance protein RD08_RS11270 SM00316 Ribosomal protein S1-like RNA-binding domain RD08_RS11290 SM00382 ATPases associated with a variety of cellular activities RD08_RS11345 SM00481 DNA polymerase alpha chain like domain RD08_RS11355 SM00382 ATPases associated with a variety of cellular activities RD08_RS11355 SM00487 DEAD-like helicases superfamily RD08_RS11355 SM00490 helicase superfamily c-terminal domain RD08_RS11355 SM00847 Helicase associated domain (HA2) Add an annotation RD08_RS11420 SM00382 ATPases associated with a variety of cellular activities RD08_RS11505 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS11505 SM00866 RD08_RS11505 RD08_RS11545 SM00981 RD08_RS11545 RD08_RS11600 SM00028 Tetratricopeptide repeats RD08_RS11600 SM00862 Transcriptional regulatory protein, C terminal RD08_RS11610 SM01192 RD08_RS11610 RD08_RS11610 SM01193 RD08_RS11610 RD08_RS11665 SM00382 ATPases associated with a variety of cellular activities RD08_RS11680 SM00882 Coenzyme A transferase RD08_RS11840 SM00358 Double-stranded RNA binding motif RD08_RS11840 SM00535 Ribonuclease III family RD08_RS11850 SM00838 Elongation factor G C-terminus RD08_RS11855 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD08_RS11880 SM00825 Beta-ketoacyl synthase RD08_RS11890 SM00822 RD08_RS11890 RD08_RS11895 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RD08_RS11930 SM00644 RD08_RS11930 RD08_RS11990 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD08_RS11995 SM01329 RD08_RS11995 RD08_RS12015 SM00382 ATPases associated with a variety of cellular activities RD08_RS12050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD08_RS12090 SM00852 Probable molybdopterin binding domain RD08_RS12110 SM00052 Putative diguanylate phosphodiesterase RD08_RS12130 SM00382 ATPases associated with a variety of cellular activities RD08_RS12140 SM00855 Phosphoglycerate mutase family RD08_RS12150 SM00851 MGS-like domain RD08_RS12150 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD08_RS12155 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RD08_RS12220 SM00267 diguanylate cyclase RD08_RS12225 SM00244 prohibitin homologues RD08_RS12285 SM00935 Outer membrane protein (OmpH-like) RD08_RS12295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD08_RS12340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD08_RS12435 SM00382 ATPases associated with a variety of cellular activities RD08_RS12500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD08_RS12500 SM00091 PAS domain RD08_RS12500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD08_RS12500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS12505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD08_RS12505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS12510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD08_RS12510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS12525 SM00047 Lysozyme subfamily 2 RD08_RS12570 SM00858 RD08_RS12570 RD08_RS12585 SM00382 ATPases associated with a variety of cellular activities RD08_RS12585 SM00962 SRP54-type protein, GTPase domain RD08_RS12605 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS12615 SM00382 ATPases associated with a variety of cellular activities RD08_RS12630 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD08_RS12650 SM00354 helix_turn _helix lactose operon repressor RD08_RS12675 SM00881 CoA binding domain RD08_RS12680 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS12680 SM00895 RD08_RS12680 RD08_RS12705 SM00869 Autotransporter beta-domain RD08_RS12725 SM00155 Phospholipase D. Active site motifs. RD08_RS12770 SM00642 Alpha-amylase domain RD08_RS12775 SM00642 Alpha-amylase domain RD08_RS12780 SM00642 Alpha-amylase domain RD08_RS12785 SM00642 Alpha-amylase domain RD08_RS12790 SM00642 Alpha-amylase domain RD08_RS12805 SM00642 Alpha-amylase domain RD08_RS12825 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS12960 SM00953 RD08_RS12960 RD08_RS12995 SM00382 ATPases associated with a variety of cellular activities RD08_RS13045 SM00382 ATPases associated with a variety of cellular activities RD08_RS13050 SM00382 ATPases associated with a variety of cellular activities RD08_RS13085 SM00434 DNA Topoisomerase IV RD08_RS13095 SM00387 Histidine kinase-like ATPases RD08_RS13095 SM00433 TopoisomeraseII RD08_RS13105 SM00357 Cold shock protein domain RD08_RS13105 SM00382 ATPases associated with a variety of cellular activities RD08_RS13105 SM00959 Rho termination factor, N-terminal domain RD08_RS13145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RD08_RS13145 SM00474 3'-5' exonuclease RD08_RS13145 SM00475 5'-3' exonuclease RD08_RS13145 SM00482 DNA polymerase A domain RD08_RS13185 SM00316 Ribosomal protein S1-like RNA-binding domain RD08_RS13195 SM00363 S4 RNA-binding domain RD08_RS13220 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD08_RS13295 SM00382 ATPases associated with a variety of cellular activities RD08_RS13300 SM00327 von Willebrand factor (vWF) type A domain RD08_RS13325 SM01005 Alanine racemase, C-terminal domain RD08_RS13360 SM00382 ATPases associated with a variety of cellular activities RD08_RS13425 SM00869 Autotransporter beta-domain RD08_RS13430 SM00869 Autotransporter beta-domain RD08_RS13440 SM00382 ATPases associated with a variety of cellular activities RD08_RS13440 SM01086 C-terminal, D2-small domain, of ClpB protein RD08_RS13445 SM00100 Cyclic nucleotide-monophosphate binding domain RD08_RS13445 SM00419 helix_turn_helix, cAMP Regulatory protein RD08_RS13515 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS13530 SM00382 ATPases associated with a variety of cellular activities RD08_RS13590 SM01007 Class II Aldolase and Adducin N-terminal domain RD08_RS13615 SM00822 RD08_RS13615 RD08_RS13625 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD08_RS13680 SM00822 RD08_RS13680 RD08_RS13695 SM00363 S4 RNA-binding domain RD08_RS13705 SM00491 RD08_RS13705 RD08_RS13710 SM00316 Ribosomal protein S1-like RNA-binding domain RD08_RS13710 SM00732 Likely ribonuclease with RNase H fold. RD08_RS13770 SM00861 Transketolase, pyrimidine binding domain RD08_RS13785 SM00344 helix_turn_helix ASNC type RD08_RS13795 SM00919 Malic enzyme, NAD binding domain RD08_RS13795 SM01274 RD08_RS13795 RD08_RS13815 SM00481 DNA polymerase alpha chain like domain RD08_RS13845 SM00869 Autotransporter beta-domain RD08_RS13855 SM00382 ATPases associated with a variety of cellular activities RD08_RS13875 SM00937 RD08_RS13875 RD08_RS13880 SM00822 RD08_RS13880 RD08_RS13905 SM00382 ATPases associated with a variety of cellular activities RD08_RS13925 SM00382 ATPases associated with a variety of cellular activities RD08_RS13935 SM00052 Putative diguanylate phosphodiesterase RD08_RS13935 SM00267 diguanylate cyclase RD08_RS13935 SM00387 Histidine kinase-like ATPases RD08_RS13935 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS13940 SM00448 cheY-homologous receiver domain RD08_RS13940 SM00862 Transcriptional regulatory protein, C terminal RD08_RS13960 SM00116 Domain in cystathionine beta-synthase and other proteins. RD08_RS13995 SM01103 RD08_RS13995 RD08_RS14005 SM00382 ATPases associated with a variety of cellular activities RD08_RS14050 SM00382 ATPases associated with a variety of cellular activities RD08_RS14075 SM00919 Malic enzyme, NAD binding domain RD08_RS14075 SM01274 RD08_RS14075 RD08_RS14125 SM00869 Autotransporter beta-domain RD08_RS14155 SM01323 RD08_RS14155 RD08_RS14180 SM00729 Elongator protein 3, MiaB family, Radical SAM RD08_RS14195 SM01091 Transporter associated domain RD08_RS14235 SM00448 cheY-homologous receiver domain RD08_RS14240 SM00448 cheY-homologous receiver domain RD08_RS14250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD08_RS14250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS14255 SM00260 Two component signalling adaptor domain RD08_RS14260 SM00073 Histidine Phosphotransfer domain RD08_RS14260 SM00260 Two component signalling adaptor domain RD08_RS14260 SM00387 Histidine kinase-like ATPases RD08_RS14260 SM01231 RD08_RS14260 RD08_RS14265 SM00448 cheY-homologous receiver domain RD08_RS14300 SM00316 Ribosomal protein S1-like RNA-binding domain RD08_RS14320 SM00852 Probable molybdopterin binding domain RD08_RS14340 SM00271 DnaJ molecular chaperone homology domain RD08_RS14390 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD08_RS14395 SM00861 Transketolase, pyrimidine binding domain RD08_RS14430 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD08_RS14430 SM00091 PAS domain RD08_RS14430 SM00387 Histidine kinase-like ATPases RD08_RS14430 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS14435 SM00421 helix_turn_helix, Lux Regulon RD08_RS14435 SM00448 cheY-homologous receiver domain RD08_RS14480 SM00363 S4 RNA-binding domain RD08_RS14530 SM00729 Elongator protein 3, MiaB family, Radical SAM RD08_RS14550 SM00382 ATPases associated with a variety of cellular activities RD08_RS14585 SM00893 Electron transfer flavoprotein domain RD08_RS14590 SM00893 Electron transfer flavoprotein domain RD08_RS14640 SM00411 bacterial (prokaryotic) histone like domain RD08_RS14645 SM00316 Ribosomal protein S1-like RNA-binding domain RD08_RS14665 SM00830 Chorismate mutase type II RD08_RS14675 SM00434 DNA Topoisomerase IV RD08_RS14780 SM00382 ATPases associated with a variety of cellular activities RD08_RS14830 SM00878 Biotin carboxylase C-terminal domain RD08_RS14835 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS14835 SM00866 RD08_RS14835 RD08_RS14910 SM00382 ATPases associated with a variety of cellular activities RD08_RS14950 SM01387 RD08_RS14950 RD08_RS14955 SM00316 Ribosomal protein S1-like RNA-binding domain RD08_RS14955 SM00322 K homology RNA-binding domain RD08_RS14985 SM00829 Enoylreductase RD08_RS15010 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS15075 SM00450 Rhodanese Homology Domain RD08_RS15100 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS15160 SM00014 Acid phosphatase homologues RD08_RS15215 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD08_RS15220 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD08_RS15305 SM00487 DEAD-like helicases superfamily RD08_RS15305 SM00490 helicase superfamily c-terminal domain RD08_RS15305 SM00982 RD08_RS15305 RD08_RS15305 SM01058 CarD-like/TRCF domain RD08_RS15365 SM00382 ATPases associated with a variety of cellular activities RD08_RS15385 SM00829 Enoylreductase RD08_RS15390 SM00895 RD08_RS15390 RD08_RS15395 SM00869 Autotransporter beta-domain RD08_RS15400 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS15400 SM00895 RD08_RS15400 RD08_RS15430 SM00382 ATPases associated with a variety of cellular activities RD08_RS15445 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS15465 SM00382 ATPases associated with a variety of cellular activities RD08_RS15545 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RD08_RS15550 SM00862 Transcriptional regulatory protein, C terminal RD08_RS15555 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS15590 SM00965 Secretin and TonB N terminus short domain RD08_RS15595 SM00867 YceI-like domain RD08_RS15630 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS15650 SM00382 ATPases associated with a variety of cellular activities RD08_RS15715 SM00650 Ribosomal RNA adenine dimethylases RD08_RS15760 SM00382 ATPases associated with a variety of cellular activities RD08_RS15815 SM00448 cheY-homologous receiver domain RD08_RS15815 SM00862 Transcriptional regulatory protein, C terminal RD08_RS16045 SM00382 ATPases associated with a variety of cellular activities RD08_RS16050 SM00382 ATPases associated with a variety of cellular activities RD08_RS16075 SM00947 Carbonic anhydrase RD08_RS16090 SM00341 Helicase and RNase D C-terminal RD08_RS16090 SM00487 DEAD-like helicases superfamily RD08_RS16090 SM00490 helicase superfamily c-terminal domain RD08_RS16090 SM00956 RD08_RS16090 RD08_RS16095 SM00382 ATPases associated with a variety of cellular activities RD08_RS16110 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD08_RS16120 SM00798 AICARFT/IMPCHase bienzyme RD08_RS16120 SM00851 MGS-like domain RD08_RS16145 SM01011 Aminopeptidase P, N-terminal domain RD08_RS16220 SM00487 DEAD-like helicases superfamily RD08_RS16220 SM00490 helicase superfamily c-terminal domain RD08_RS16240 SM00852 Probable molybdopterin binding domain RD08_RS16245 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS16325 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS16325 SM00895 RD08_RS16325 RD08_RS16345 SM00919 Malic enzyme, NAD binding domain RD08_RS16345 SM01274 RD08_RS16345 RD08_RS16365 SM00382 ATPases associated with a variety of cellular activities RD08_RS16395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD08_RS16430 SM00382 ATPases associated with a variety of cellular activities RD08_RS16430 SM00962 SRP54-type protein, GTPase domain RD08_RS16430 SM00963 SRP54-type protein, helical bundle domain RD08_RS16435 SM00880 RD08_RS16435 RD08_RS16475 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS16515 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RD08_RS16535 SM00869 Autotransporter beta-domain RD08_RS16545 SM00883 Chaperonin 10 Kd subunit RD08_RS16605 SM00267 diguanylate cyclase RD08_RS16610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD08_RS16655 SM00155 Phospholipase D. Active site motifs. RD08_RS16690 SM01144 RD08_RS16690 RD08_RS16700 SM00316 Ribosomal protein S1-like RNA-binding domain RD08_RS16700 SM00357 Cold shock protein domain RD08_RS16700 SM00955 RD08_RS16700 RD08_RS16705 SM00967 RNA 2'-O ribose methyltransferase substrate binding RD08_RS16715 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RD08_RS16720 SM00411 bacterial (prokaryotic) histone like domain RD08_RS16745 SM00448 cheY-homologous receiver domain RD08_RS16745 SM00862 Transcriptional regulatory protein, C terminal RD08_RS16750 SM00387 Histidine kinase-like ATPases RD08_RS16750 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS16805 SM01130 RD08_RS16805 RD08_RS16810 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS16810 SM00895 RD08_RS16810 RD08_RS16825 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS16840 SM00387 Histidine kinase-like ATPases RD08_RS16840 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS16850 SM00448 cheY-homologous receiver domain RD08_RS16850 SM00862 Transcriptional regulatory protein, C terminal RD08_RS16860 SM00986 Uracil DNA glycosylase superfamily RD08_RS16860 SM00987 UreE urease accessory protein, C-terminal domain RD08_RS16870 SM00968 SMC proteins Flexible Hinge Domain RD08_RS16875 SM00771 ZipA, C-terminal domain (FtsZ-binding) RD08_RS16880 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD08_RS16880 SM00292 breast cancer carboxy-terminal domain RD08_RS16880 SM00532 Ligase N family RD08_RS16905 SM00382 ATPases associated with a variety of cellular activities RD08_RS16930 SM00382 ATPases associated with a variety of cellular activities RD08_RS16960 SM00382 ATPases associated with a variety of cellular activities RD08_RS16965 SM00382 ATPases associated with a variety of cellular activities RD08_RS16970 SM00478 endonuclease III RD08_RS16970 SM00525 RD08_RS16970 RD08_RS17015 SM00954 Region found in RelA / SpoT proteins RD08_RS17055 SM00316 Ribosomal protein S1-like RNA-binding domain RD08_RS17060 SM00363 S4 RNA-binding domain RD08_RS17130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD08_RS17145 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS17145 SM00895 RD08_RS17145 RD08_RS17155 SM00357 Cold shock protein domain RD08_RS17225 SM00838 Elongation factor G C-terminus RD08_RS17225 SM00889 Elongation factor G, domain IV RD08_RS17230 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS17255 SM01130 RD08_RS17255 RD08_RS17315 SM00881 CoA binding domain RD08_RS17320 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS17330 SM00861 Transketolase, pyrimidine binding domain RD08_RS17370 SM00382 ATPases associated with a variety of cellular activities RD08_RS17375 SM00382 ATPases associated with a variety of cellular activities RD08_RS17405 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS17425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD08_RS17425 SM00245 tail specific protease RD08_RS17435 SM00855 Phosphoglycerate mutase family RD08_RS17440 SM00450 Rhodanese Homology Domain RD08_RS17500 SM00382 ATPases associated with a variety of cellular activities RD08_RS17520 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD08_RS17585 SM00347 helix_turn_helix multiple antibiotic resistance protein RD08_RS17600 SM00448 cheY-homologous receiver domain RD08_RS17605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD08_RS17605 SM00387 Histidine kinase-like ATPases RD08_RS17605 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS17670 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS17690 SM00344 helix_turn_helix ASNC type RD08_RS17740 SM00729 Elongator protein 3, MiaB family, Radical SAM RD08_RS17760 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS17760 SM00895 RD08_RS17760 RD08_RS17800 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS17820 SM00869 Autotransporter beta-domain RD08_RS17850 SM01119 RD08_RS17850 RD08_RS17860 SM00244 prohibitin homologues RD08_RS17955 SM00387 Histidine kinase-like ATPases RD08_RS17955 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS17990 SM01234 RD08_RS17990 RD08_RS18005 SM00382 ATPases associated with a variety of cellular activities RD08_RS18005 SM00760 Bacterial dnaA protein helix-turn-helix domain RD08_RS18010 SM00480 DNA polymerase III beta subunit RD08_RS18015 SM00387 Histidine kinase-like ATPases RD08_RS18015 SM00433 TopoisomeraseII RD08_RS18020 SM00346 helix_turn_helix isocitrate lyase regulation RD08_RS18045 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS18045 SM00871 Bacterial transcription activator, effector binding domain RD08_RS18065 SM00422 helix_turn_helix, mercury resistance RD08_RS18070 SM00849 Metallo-beta-lactamase superfamily RD08_RS18100 SM00878 Biotin carboxylase C-terminal domain RD08_RS18100 SM01209 RD08_RS18100 RD08_RS18120 SM01119 RD08_RS18120 RD08_RS18155 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RD08_RS18155 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RD08_RS18155 SM00493 RD08_RS18155 RD08_RS18165 SM00382 ATPases associated with a variety of cellular activities RD08_RS18195 SM00344 helix_turn_helix ASNC type RD08_RS18205 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain RD08_RS18225 SM01018 B12 binding domain RD08_RS18305 SM00838 Elongation factor G C-terminus RD08_RS18305 SM00889 Elongation factor G, domain IV RD08_RS18315 SM01403 RD08_RS18315 RD08_RS18335 SM01382 RD08_RS18335 RD08_RS18335 SM01383 RD08_RS18335 RD08_RS18350 SM00322 K homology RNA-binding domain RD08_RS18385 SM01374 RD08_RS18385 RD08_RS18460 SM00363 S4 RNA-binding domain RD08_RS18460 SM01390 RD08_RS18460 RD08_RS18465 SM00662 RNA polymerases D RD08_RS18495 SM01004 Delta-aminolevulinic acid dehydratase RD08_RS18525 SM01219 RD08_RS18525 RD08_RS18545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD08_RS18595 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS18595 SM00866 RD08_RS18595 RD08_RS18640 SM00382 ATPases associated with a variety of cellular activities RD08_RS18665 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS18665 SM00895 RD08_RS18665 RD08_RS18695 SM01130 RD08_RS18695 RD08_RS18705 SM00257 Lysin motif RD08_RS18755 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS18765 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS18770 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD08_RS18785 SM00382 ATPases associated with a variety of cellular activities RD08_RS18800 SM00829 Enoylreductase RD08_RS18850 SM00382 ATPases associated with a variety of cellular activities RD08_RS18900 SM00984 UDP binding domain RD08_RS18990 SM00100 Cyclic nucleotide-monophosphate binding domain RD08_RS19015 SM00829 Enoylreductase RD08_RS19045 SM00382 ATPases associated with a variety of cellular activities RD08_RS19155 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS19245 SM00342 helix_turn_helix, arabinose operon control protein RD08_RS19360 SM00421 helix_turn_helix, Lux Regulon RD08_RS19400 SM00382 ATPases associated with a variety of cellular activities RD08_RS19415 SM00062 Bacterial periplasmic substrate-binding proteins RD08_RS19420 SM00382 ATPases associated with a variety of cellular activities RD08_RS19440 SM00478 endonuclease III RD08_RS19445 SM00530 Helix-turn-helix XRE-family like proteins RD08_RS19520 SM01060 RD08_RS19520 RD08_RS19530 SM00382 ATPases associated with a variety of cellular activities RD08_RS19550 SM00382 ATPases associated with a variety of cellular activities RD08_RS19555 SM00382 ATPases associated with a variety of cellular activities RD08_RS19585 SM00448 cheY-homologous receiver domain RD08_RS19585 SM00862 Transcriptional regulatory protein, C terminal RD08_RS19590 SM00387 Histidine kinase-like ATPases RD08_RS19590 SM00388 His Kinase A (phosphoacceptor) domain RD08_RS19615 SM00357 Cold shock protein domain