RD09_RS00005 SM01228 RD09_RS00005 RD09_RS00025 SM00470 ParB-like nuclease domain RD09_RS00030 SM00870 RD09_RS00030 RD09_RS00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RD09_RS00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RD09_RS00075 SM00649 Ribosomal protein L11/L12 RD09_RS00100 SM00663 RNA polymerase I subunit A N-terminus RD09_RS00130 SM00448 cheY-homologous receiver domain RD09_RS00130 SM00862 Transcriptional regulatory protein, C terminal RD09_RS00200 SM00563 Phosphate acyltransferases RD09_RS00240 SM00421 helix_turn_helix, Lux Regulon RD09_RS00285 SM00382 ATPases associated with a variety of cellular activities RD09_RS00300 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS00390 SM00387 Histidine kinase-like ATPases RD09_RS00400 SM00644 RD09_RS00400 RD09_RS00415 SM00382 ATPases associated with a variety of cellular activities RD09_RS00415 SM00962 SRP54-type protein, GTPase domain RD09_RS00415 SM00963 SRP54-type protein, helical bundle domain RD09_RS00515 SM00382 ATPases associated with a variety of cellular activities RD09_RS00540 SM00936 Penicillin-binding protein 5, C-terminal domain RD09_RS00560 SM00729 Elongator protein 3, MiaB family, Radical SAM RD09_RS00605 SM00836 DALR anticodon binding domain RD09_RS00605 SM01016 Arginyl tRNA synthetase N terminal dom RD09_RS00640 SM00382 ATPases associated with a variety of cellular activities RD09_RS00685 SM00382 ATPases associated with a variety of cellular activities RD09_RS00735 SM00829 Enoylreductase RD09_RS00750 SM00382 ATPases associated with a variety of cellular activities RD09_RS00765 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS00770 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS00780 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS00830 SM00257 Lysin motif RD09_RS00840 SM01130 RD09_RS00840 RD09_RS00870 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS00870 SM00895 RD09_RS00870 RD09_RS00895 SM00382 ATPases associated with a variety of cellular activities RD09_RS00940 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS00940 SM00866 RD09_RS00940 RD09_RS00990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD09_RS01010 SM01219 RD09_RS01010 RD09_RS01040 SM01004 Delta-aminolevulinic acid dehydratase RD09_RS01070 SM00662 RNA polymerases D RD09_RS01075 SM00363 S4 RNA-binding domain RD09_RS01075 SM01390 RD09_RS01075 RD09_RS01150 SM01374 RD09_RS01150 RD09_RS01185 SM00322 K homology RNA-binding domain RD09_RS01200 SM01382 RD09_RS01200 RD09_RS01200 SM01383 RD09_RS01200 RD09_RS01220 SM01403 RD09_RS01220 RD09_RS01230 SM00838 Elongation factor G C-terminus RD09_RS01230 SM00889 Elongation factor G, domain IV RD09_RS01310 SM01018 B12 binding domain RD09_RS01330 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain RD09_RS01340 SM00344 helix_turn_helix ASNC type RD09_RS01370 SM00382 ATPases associated with a variety of cellular activities RD09_RS01380 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RD09_RS01380 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RD09_RS01380 SM00493 RD09_RS01380 RD09_RS01415 SM01119 RD09_RS01415 RD09_RS01435 SM00878 Biotin carboxylase C-terminal domain RD09_RS01435 SM01209 RD09_RS01435 RD09_RS01465 SM00849 Metallo-beta-lactamase superfamily RD09_RS01470 SM00422 helix_turn_helix, mercury resistance RD09_RS01490 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS01490 SM00871 Bacterial transcription activator, effector binding domain RD09_RS01515 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS01520 SM00387 Histidine kinase-like ATPases RD09_RS01520 SM00433 TopoisomeraseII RD09_RS01525 SM00480 DNA polymerase III beta subunit RD09_RS01530 SM00382 ATPases associated with a variety of cellular activities RD09_RS01530 SM00760 Bacterial dnaA protein helix-turn-helix domain RD09_RS01545 SM01234 RD09_RS01545 RD09_RS01580 SM00387 Histidine kinase-like ATPases RD09_RS01580 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS01675 SM00244 prohibitin homologues RD09_RS01685 SM01119 RD09_RS01685 RD09_RS01715 SM00869 Autotransporter beta-domain RD09_RS01735 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS01775 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS01775 SM00895 RD09_RS01775 RD09_RS01795 SM00729 Elongator protein 3, MiaB family, Radical SAM RD09_RS01845 SM00344 helix_turn_helix ASNC type RD09_RS01865 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS01935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS01935 SM00387 Histidine kinase-like ATPases RD09_RS01935 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS01940 SM00448 cheY-homologous receiver domain RD09_RS01955 SM00347 helix_turn_helix multiple antibiotic resistance protein RD09_RS02020 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD09_RS02040 SM00382 ATPases associated with a variety of cellular activities RD09_RS02100 SM00450 Rhodanese Homology Domain RD09_RS02105 SM00855 Phosphoglycerate mutase family RD09_RS02115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD09_RS02115 SM00245 tail specific protease RD09_RS02135 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS02165 SM00382 ATPases associated with a variety of cellular activities RD09_RS02170 SM00382 ATPases associated with a variety of cellular activities RD09_RS02210 SM00861 Transketolase, pyrimidine binding domain RD09_RS02220 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS02225 SM00881 CoA binding domain RD09_RS02285 SM01130 RD09_RS02285 RD09_RS02355 SM00829 Enoylreductase RD09_RS02365 SM00881 CoA binding domain RD09_RS02395 SM00344 helix_turn_helix ASNC type RD09_RS02420 SM00881 CoA binding domain RD09_RS02430 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS02460 SM00937 RD09_RS02460 RD09_RS02490 SM01092 CO dehydrogenase flavoprotein C-terminal domain RD09_RS02500 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD09_RS02555 SM00382 ATPases associated with a variety of cellular activities RD09_RS02575 SM00116 Domain in cystathionine beta-synthase and other proteins. RD09_RS02605 SM00834 Putative regulatory protein RD09_RS02625 SM00155 Phospholipase D. Active site motifs. RD09_RS02665 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS02785 SM00382 ATPases associated with a variety of cellular activities RD09_RS02810 SM00487 DEAD-like helicases superfamily RD09_RS02810 SM00490 helicase superfamily c-terminal domain RD09_RS02830 SM00382 ATPases associated with a variety of cellular activities RD09_RS02890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD09_RS02900 SM00905 Dihydroneopterin aldolase RD09_RS02930 SM00925 MltA specific insert domain RD09_RS03010 SM00903 Flavin reductase like domain RD09_RS03035 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS03035 SM00866 RD09_RS03035 RD09_RS03070 SM00382 ATPases associated with a variety of cellular activities RD09_RS03155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS03155 SM00387 Histidine kinase-like ATPases RD09_RS03160 SM00448 cheY-homologous receiver domain RD09_RS03160 SM00862 Transcriptional regulatory protein, C terminal RD09_RS03200 SM00257 Lysin motif RD09_RS03205 SM00849 Metallo-beta-lactamase superfamily RD09_RS03280 SM00822 RD09_RS03280 RD09_RS03290 SM00382 ATPases associated with a variety of cellular activities RD09_RS03295 SM00382 ATPases associated with a variety of cellular activities RD09_RS03375 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS03375 SM00866 RD09_RS03375 RD09_RS03395 SM00422 helix_turn_helix, mercury resistance RD09_RS03425 SM00988 UreE urease accessory protein, N-terminal domain RD09_RS03480 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS03510 SM00984 UDP binding domain RD09_RS03570 SM00448 cheY-homologous receiver domain RD09_RS03570 SM00862 Transcriptional regulatory protein, C terminal RD09_RS03575 SM00387 Histidine kinase-like ATPases RD09_RS03575 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS03610 SM00849 Metallo-beta-lactamase superfamily RD09_RS03615 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RD09_RS03615 SM01232 RD09_RS03615 RD09_RS03620 SM00028 Tetratricopeptide repeats RD09_RS03640 SM01400 RD09_RS03640 RD09_RS03725 SM00869 Autotransporter beta-domain RD09_RS03735 SM00862 Transcriptional regulatory protein, C terminal RD09_RS03770 SM00422 helix_turn_helix, mercury resistance RD09_RS03770 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS03810 SM00344 helix_turn_helix ASNC type RD09_RS03810 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS03860 SM00382 ATPases associated with a variety of cellular activities RD09_RS03865 SM00155 Phospholipase D. Active site motifs. RD09_RS03875 SM00986 Uracil DNA glycosylase superfamily RD09_RS03875 SM00987 UreE urease accessory protein, C-terminal domain RD09_RS03880 SM00487 DEAD-like helicases superfamily RD09_RS03880 SM00490 helicase superfamily c-terminal domain RD09_RS03935 SM00996 S-adenosyl-L-homocysteine hydrolase RD09_RS03935 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD09_RS04005 SM00382 ATPases associated with a variety of cellular activities RD09_RS04020 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD09_RS04035 SM00382 ATPases associated with a variety of cellular activities RD09_RS04035 SM01086 C-terminal, D2-small domain, of ClpB protein RD09_RS04145 SM00344 helix_turn_helix ASNC type RD09_RS04180 SM00151 SWI complex, BAF60b domains RD09_RS04195 SM00382 ATPases associated with a variety of cellular activities RD09_RS04265 SM00842 Cell division protein FtsA RD09_RS04270 SM00864 Tubulin/FtsZ family, GTPase domain RD09_RS04270 SM00865 Tubulin/FtsZ family, C-terminal domain RD09_RS04290 SM00957 SecA DEAD-like domain RD09_RS04290 SM00958 SecA preprotein cross-linking domain RD09_RS04320 SM00344 helix_turn_helix ASNC type RD09_RS04350 SM00955 RD09_RS04350 RD09_RS04380 SM00878 Biotin carboxylase C-terminal domain RD09_RS04460 SM00344 helix_turn_helix ASNC type RD09_RS04490 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS04490 SM00895 RD09_RS04490 RD09_RS04500 SM00487 DEAD-like helicases superfamily RD09_RS04500 SM00490 helicase superfamily c-terminal domain RD09_RS04520 SM00382 ATPases associated with a variety of cellular activities RD09_RS04560 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD09_RS04590 SM00363 S4 RNA-binding domain RD09_RS04685 SM00387 Histidine kinase-like ATPases RD09_RS04690 SM00448 cheY-homologous receiver domain RD09_RS04715 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD09_RS04765 SM00257 Lysin motif RD09_RS04805 SM00528 Domain in histone-like proteins of HNS family RD09_RS04825 SM00912 haemagglutination activity domain RD09_RS04860 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS04870 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RD09_RS04870 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RD09_RS04940 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS04940 SM00895 RD09_RS04940 RD09_RS04995 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS05030 SM00382 ATPases associated with a variety of cellular activities RD09_RS05055 SM00248 ankyrin repeats RD09_RS05100 SM00344 helix_turn_helix ASNC type RD09_RS05125 SM00382 ATPases associated with a variety of cellular activities RD09_RS05140 SM00829 Enoylreductase RD09_RS05165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD09_RS05190 SM00822 RD09_RS05190 RD09_RS05255 SM00822 RD09_RS05255 RD09_RS05280 SM00422 helix_turn_helix, mercury resistance RD09_RS05310 SM00382 ATPases associated with a variety of cellular activities RD09_RS05345 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS05345 SM00895 RD09_RS05345 RD09_RS05395 SM00382 ATPases associated with a variety of cellular activities RD09_RS05395 SM00930 RD09_RS05395 RD09_RS05445 SM00116 Domain in cystathionine beta-synthase and other proteins. RD09_RS05445 SM00924 MgtE intracellular N domain RD09_RS05470 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS05485 SM00861 Transketolase, pyrimidine binding domain RD09_RS05520 SM00382 ATPases associated with a variety of cellular activities RD09_RS05535 SM00670 Large family of predicted nucleotide-binding domains RD09_RS05620 SM00822 RD09_RS05620 RD09_RS05685 SM00357 Cold shock protein domain RD09_RS05695 SM01359 RD09_RS05695 RD09_RS05695 SM01360 RD09_RS05695 RD09_RS05705 SM00382 ATPases associated with a variety of cellular activities RD09_RS05705 SM01086 C-terminal, D2-small domain, of ClpB protein RD09_RS05750 SM00382 ATPases associated with a variety of cellular activities RD09_RS05755 SM00382 ATPases associated with a variety of cellular activities RD09_RS05775 SM00869 Autotransporter beta-domain RD09_RS05785 SM00938 Nitrogen regulatory protein P-II RD09_RS05855 SM00422 helix_turn_helix, mercury resistance RD09_RS05880 SM00729 Elongator protein 3, MiaB family, Radical SAM RD09_RS05880 SM00876 Biotin and Thiamin Synthesis associated domain RD09_RS05930 SM00852 Probable molybdopterin binding domain RD09_RS05935 SM00852 Probable molybdopterin binding domain RD09_RS05940 SM00729 Elongator protein 3, MiaB family, Radical SAM RD09_RS05975 SM00938 Nitrogen regulatory protein P-II RD09_RS06035 SM00479 RD09_RS06035 RD09_RS06130 SM01211 RD09_RS06130 RD09_RS06135 SM00912 haemagglutination activity domain RD09_RS06150 SM00347 helix_turn_helix multiple antibiotic resistance protein RD09_RS06155 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS06160 SM01007 Class II Aldolase and Adducin N-terminal domain RD09_RS06200 SM01130 RD09_RS06200 RD09_RS06245 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS06255 SM00420 helix_turn_helix, Deoxyribose operon repressor RD09_RS06255 SM01134 RD09_RS06255 RD09_RS06260 SM00382 ATPases associated with a variety of cellular activities RD09_RS06265 SM00382 ATPases associated with a variety of cellular activities RD09_RS06300 SM00344 helix_turn_helix ASNC type RD09_RS06335 SM00421 helix_turn_helix, Lux Regulon RD09_RS06345 SM00869 Autotransporter beta-domain RD09_RS06355 SM00116 Domain in cystathionine beta-synthase and other proteins. RD09_RS06355 SM01240 RD09_RS06355 RD09_RS06365 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS06390 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS06405 SM00382 ATPases associated with a variety of cellular activities RD09_RS06445 SM00849 Metallo-beta-lactamase superfamily RD09_RS06445 SM01027 Beta-Casp domain RD09_RS06465 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS06485 SM00829 Enoylreductase RD09_RS06495 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS06535 SM00382 ATPases associated with a variety of cellular activities RD09_RS06540 SM00354 helix_turn _helix lactose operon repressor RD09_RS06590 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS06625 SM00873 B3/4 domain RD09_RS06625 SM00874 tRNA synthetase B5 domain RD09_RS06625 SM00896 Ferredoxin-fold anticodon binding domain RD09_RS06630 SM00411 bacterial (prokaryotic) histone like domain RD09_RS06635 SM00422 helix_turn_helix, mercury resistance RD09_RS06740 SM00822 RD09_RS06740 RD09_RS06755 SM00382 ATPases associated with a variety of cellular activities RD09_RS06770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS06770 SM00387 Histidine kinase-like ATPases RD09_RS06770 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS06775 SM00448 cheY-homologous receiver domain RD09_RS06775 SM00862 Transcriptional regulatory protein, C terminal RD09_RS06780 SM00382 ATPases associated with a variety of cellular activities RD09_RS06810 SM00881 CoA binding domain RD09_RS06880 SM00858 RD09_RS06880 RD09_RS06890 SM00240 Forkhead associated domain RD09_RS06890 SM00382 ATPases associated with a variety of cellular activities RD09_RS07040 SM00271 DnaJ molecular chaperone homology domain RD09_RS07065 SM00382 ATPases associated with a variety of cellular activities RD09_RS07090 SM01329 RD09_RS07090 RD09_RS07110 SM00448 cheY-homologous receiver domain RD09_RS07110 SM00862 Transcriptional regulatory protein, C terminal RD09_RS07115 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS07160 SM00463 Small MutS-related domain RD09_RS07170 SM00843 RD09_RS07170 RD09_RS07180 SM00382 ATPases associated with a variety of cellular activities RD09_RS07210 SM00267 diguanylate cyclase RD09_RS07235 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS07255 SM01006 Siderophore biosynthesis protein domain RD09_RS07305 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RD09_RS07305 SM00267 diguanylate cyclase RD09_RS07325 SM00421 helix_turn_helix, Lux Regulon RD09_RS07325 SM00448 cheY-homologous receiver domain RD09_RS07330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD09_RS07375 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS07390 SM00382 ATPases associated with a variety of cellular activities RD09_RS07410 SM00834 Putative regulatory protein RD09_RS07425 SM00421 helix_turn_helix, Lux Regulon RD09_RS07455 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS07465 SM01001 AIR carboxylase RD09_RS07480 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS07485 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS07495 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS07495 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD09_RS07505 SM00382 ATPases associated with a variety of cellular activities RD09_RS07590 SM00382 ATPases associated with a variety of cellular activities RD09_RS07600 SM00493 RD09_RS07600 RD09_RS07670 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RD09_RS07670 SM00534 ATPase domain of DNA mismatch repair MUTS family RD09_RS07675 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RD09_RS07690 SM01130 RD09_RS07690 RD09_RS07705 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS07705 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD09_RS07715 SM00382 ATPases associated with a variety of cellular activities RD09_RS07720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD09_RS07720 SM00954 Region found in RelA / SpoT proteins RD09_RS07725 SM01409 RD09_RS07725 RD09_RS07730 SM00072 Guanylate kinase homologues. RD09_RS07745 SM00822 RD09_RS07745 RD09_RS07760 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS07795 SM00052 Putative diguanylate phosphodiesterase RD09_RS07795 SM00267 diguanylate cyclase RD09_RS07810 SM00729 Elongator protein 3, MiaB family, Radical SAM RD09_RS07815 SM01230 RD09_RS07815 RD09_RS07820 SM00091 PAS domain RD09_RS07820 SM00387 Histidine kinase-like ATPases RD09_RS07820 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS07825 SM00382 ATPases associated with a variety of cellular activities RD09_RS07825 SM00448 cheY-homologous receiver domain RD09_RS07850 SM00382 ATPases associated with a variety of cellular activities RD09_RS07895 SM00487 DEAD-like helicases superfamily RD09_RS07895 SM00490 helicase superfamily c-terminal domain RD09_RS07940 SM00382 ATPases associated with a variety of cellular activities RD09_RS07965 SM00984 UDP binding domain RD09_RS08015 SM00382 ATPases associated with a variety of cellular activities RD09_RS08020 SM00382 ATPases associated with a variety of cellular activities RD09_RS08070 SM00327 von Willebrand factor (vWF) type A domain RD09_RS08075 SM00028 Tetratricopeptide repeats RD09_RS08075 SM00327 von Willebrand factor (vWF) type A domain RD09_RS08115 SM00421 helix_turn_helix, Lux Regulon RD09_RS08115 SM00448 cheY-homologous receiver domain RD09_RS08120 SM00869 Autotransporter beta-domain RD09_RS08125 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS08230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD09_RS08245 SM00822 RD09_RS08245 RD09_RS08345 SM00382 ATPases associated with a variety of cellular activities RD09_RS08350 SM00382 ATPases associated with a variety of cellular activities RD09_RS08435 SM00248 ankyrin repeats RD09_RS08440 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS08445 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS08445 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD09_RS08455 SM00382 ATPases associated with a variety of cellular activities RD09_RS08465 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD09_RS08505 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS08505 SM00895 RD09_RS08505 RD09_RS08545 SM00052 Putative diguanylate phosphodiesterase RD09_RS08550 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS08550 SM00073 Histidine Phosphotransfer domain RD09_RS08550 SM00091 PAS domain RD09_RS08550 SM00387 Histidine kinase-like ATPases RD09_RS08550 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS08550 SM00448 cheY-homologous receiver domain RD09_RS08555 SM00421 helix_turn_helix, Lux Regulon RD09_RS08555 SM00448 cheY-homologous receiver domain RD09_RS08560 SM00912 haemagglutination activity domain RD09_RS08655 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS08675 SM01091 Transporter associated domain RD09_RS08695 SM00028 Tetratricopeptide repeats RD09_RS08700 SM00840 RD09_RS08700 RD09_RS08705 SM00478 endonuclease III RD09_RS08820 SM00382 ATPases associated with a variety of cellular activities RD09_RS08835 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS08840 SM00881 CoA binding domain RD09_RS08870 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD09_RS08895 SM00028 Tetratricopeptide repeats RD09_RS08910 SM00347 helix_turn_helix multiple antibiotic resistance protein RD09_RS08920 SM00421 helix_turn_helix, Lux Regulon RD09_RS08965 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS08985 SM00318 Staphylococcal nuclease homologues RD09_RS09005 SM00382 ATPases associated with a variety of cellular activities RD09_RS09010 SM00347 helix_turn_helix multiple antibiotic resistance protein RD09_RS09055 SM00858 RD09_RS09055 RD09_RS09085 SM00028 Tetratricopeptide repeats RD09_RS09100 SM00382 ATPases associated with a variety of cellular activities RD09_RS09130 SM00841 Elongation factor P, C-terminal RD09_RS09130 SM01185 RD09_RS09130 RD09_RS09190 SM00479 RD09_RS09190 RD09_RS09280 SM00869 Autotransporter beta-domain RD09_RS09310 SM01209 RD09_RS09310 RD09_RS09310 SM01210 RD09_RS09310 RD09_RS09375 SM00382 ATPases associated with a variety of cellular activities RD09_RS09395 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS09400 SM01329 RD09_RS09400 RD09_RS09420 SM00347 helix_turn_helix multiple antibiotic resistance protein RD09_RS09435 SM00829 Enoylreductase RD09_RS09450 SM00450 Rhodanese Homology Domain RD09_RS09465 SM00382 ATPases associated with a variety of cellular activities RD09_RS09510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD09_RS09510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS09625 SM00382 ATPases associated with a variety of cellular activities RD09_RS09695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS09695 SM00331 Sigma factor PP2C-like phosphatases RD09_RS09695 SM01049 RD09_RS09695 RD09_RS09705 SM01005 Alanine racemase, C-terminal domain RD09_RS09720 SM00155 Phospholipase D. Active site motifs. RD09_RS09730 SM00869 Autotransporter beta-domain RD09_RS09765 SM00347 helix_turn_helix multiple antibiotic resistance protein RD09_RS09810 SM01207 RD09_RS09810 RD09_RS09825 SM00257 Lysin motif RD09_RS09850 SM00422 helix_turn_helix, mercury resistance RD09_RS09905 SM00749 bacterial OsmY and nodulation domain RD09_RS09965 SM00344 helix_turn_helix ASNC type RD09_RS09990 SM00904 Riboflavin kinase RD09_RS10020 SM00965 Secretin and TonB N terminus short domain RD09_RS10025 SM00382 ATPases associated with a variety of cellular activities RD09_RS10060 SM00869 Autotransporter beta-domain RD09_RS10075 SM00357 Cold shock protein domain RD09_RS10085 SM00357 Cold shock protein domain RD09_RS10105 SM00382 ATPases associated with a variety of cellular activities RD09_RS10105 SM00994 ClpX C4-type zinc finger RD09_RS10105 SM01086 C-terminal, D2-small domain, of ClpB protein RD09_RS10110 SM00382 ATPases associated with a variety of cellular activities RD09_RS10110 SM00464 Found in ATP-dependent protease La (LON) RD09_RS10165 SM00882 Coenzyme A transferase RD09_RS10170 SM00882 Coenzyme A transferase RD09_RS10195 SM00869 Autotransporter beta-domain RD09_RS10210 SM00487 DEAD-like helicases superfamily RD09_RS10210 SM00490 helicase superfamily c-terminal domain RD09_RS10215 SM00226 Low molecular weight phosphatase family RD09_RS10240 SM00271 DnaJ molecular chaperone homology domain RD09_RS10295 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS10295 SM00866 RD09_RS10295 RD09_RS10355 SM00382 ATPases associated with a variety of cellular activities RD09_RS10405 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD09_RS10455 SM00387 Histidine kinase-like ATPases RD09_RS10455 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS10460 SM00448 cheY-homologous receiver domain RD09_RS10475 SM00562 RD09_RS10475 RD09_RS10505 SM00564 beta-propeller repeat RD09_RS10510 SM00382 ATPases associated with a variety of cellular activities RD09_RS10530 SM00244 prohibitin homologues RD09_RS10535 SM00244 prohibitin homologues RD09_RS10545 SM00788 Adenylosuccinate synthetase RD09_RS10560 SM00400 zinc finger RD09_RS10560 SM00493 RD09_RS10560 RD09_RS10560 SM00766 DNA primase DnaG DnaB-binding RD09_RS10605 SM00382 ATPases associated with a variety of cellular activities RD09_RS10710 SM00382 ATPases associated with a variety of cellular activities RD09_RS10750 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS10770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD09_RS10785 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS10785 SM00895 RD09_RS10785 RD09_RS10805 SM00382 ATPases associated with a variety of cellular activities RD09_RS10840 SM00464 Found in ATP-dependent protease La (LON) RD09_RS10850 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS10860 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD09_RS10950 SM00822 RD09_RS10950 RD09_RS11115 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD09_RS11115 SM00465 GIY-YIG type nucleases (URI domain) RD09_RS11150 SM00862 Transcriptional regulatory protein, C terminal RD09_RS11170 SM00382 ATPases associated with a variety of cellular activities RD09_RS11210 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS11210 SM00895 RD09_RS11210 RD09_RS11230 SM00382 ATPases associated with a variety of cellular activities RD09_RS11285 SM00411 bacterial (prokaryotic) histone like domain RD09_RS11290 SM00347 helix_turn_helix multiple antibiotic resistance protein RD09_RS11380 SM00316 Ribosomal protein S1-like RNA-binding domain RD09_RS11400 SM00382 ATPases associated with a variety of cellular activities RD09_RS11455 SM00481 DNA polymerase alpha chain like domain RD09_RS11465 SM00382 ATPases associated with a variety of cellular activities RD09_RS11465 SM00487 DEAD-like helicases superfamily RD09_RS11465 SM00490 helicase superfamily c-terminal domain RD09_RS11465 SM00847 Helicase associated domain (HA2) Add an annotation RD09_RS11530 SM00382 ATPases associated with a variety of cellular activities RD09_RS11615 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS11615 SM00866 RD09_RS11615 RD09_RS11655 SM00981 RD09_RS11655 RD09_RS11710 SM00028 Tetratricopeptide repeats RD09_RS11710 SM00862 Transcriptional regulatory protein, C terminal RD09_RS11720 SM01192 RD09_RS11720 RD09_RS11720 SM01193 RD09_RS11720 RD09_RS11775 SM00382 ATPases associated with a variety of cellular activities RD09_RS11790 SM00882 Coenzyme A transferase RD09_RS11950 SM00358 Double-stranded RNA binding motif RD09_RS11950 SM00535 Ribonuclease III family RD09_RS11960 SM00838 Elongation factor G C-terminus RD09_RS11965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD09_RS11990 SM00825 Beta-ketoacyl synthase RD09_RS12000 SM00822 RD09_RS12000 RD09_RS12005 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RD09_RS12040 SM00644 RD09_RS12040 RD09_RS12100 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD09_RS12105 SM01329 RD09_RS12105 RD09_RS12125 SM00382 ATPases associated with a variety of cellular activities RD09_RS12160 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD09_RS12200 SM00852 Probable molybdopterin binding domain RD09_RS12220 SM00052 Putative diguanylate phosphodiesterase RD09_RS12240 SM00382 ATPases associated with a variety of cellular activities RD09_RS12250 SM00855 Phosphoglycerate mutase family RD09_RS12260 SM00851 MGS-like domain RD09_RS12260 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD09_RS12265 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RD09_RS12330 SM00267 diguanylate cyclase RD09_RS12335 SM00244 prohibitin homologues RD09_RS12395 SM00935 Outer membrane protein (OmpH-like) RD09_RS12405 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD09_RS12450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD09_RS12545 SM00382 ATPases associated with a variety of cellular activities RD09_RS12610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD09_RS12610 SM00091 PAS domain RD09_RS12610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD09_RS12610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS12615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD09_RS12615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS12620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD09_RS12620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS12635 SM00047 Lysozyme subfamily 2 RD09_RS12680 SM00858 RD09_RS12680 RD09_RS12695 SM00382 ATPases associated with a variety of cellular activities RD09_RS12695 SM00962 SRP54-type protein, GTPase domain RD09_RS12715 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS12725 SM00382 ATPases associated with a variety of cellular activities RD09_RS12740 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD09_RS12760 SM00354 helix_turn _helix lactose operon repressor RD09_RS12785 SM00881 CoA binding domain RD09_RS12790 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS12790 SM00895 RD09_RS12790 RD09_RS12815 SM00869 Autotransporter beta-domain RD09_RS12835 SM00155 Phospholipase D. Active site motifs. RD09_RS12880 SM00642 Alpha-amylase domain RD09_RS12885 SM00642 Alpha-amylase domain RD09_RS12890 SM00642 Alpha-amylase domain RD09_RS12895 SM00642 Alpha-amylase domain RD09_RS12900 SM00642 Alpha-amylase domain RD09_RS12935 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS13070 SM00953 RD09_RS13070 RD09_RS13105 SM00382 ATPases associated with a variety of cellular activities RD09_RS13155 SM00382 ATPases associated with a variety of cellular activities RD09_RS13160 SM00382 ATPases associated with a variety of cellular activities RD09_RS13195 SM00434 DNA Topoisomerase IV RD09_RS13205 SM00387 Histidine kinase-like ATPases RD09_RS13205 SM00433 TopoisomeraseII RD09_RS13215 SM00357 Cold shock protein domain RD09_RS13215 SM00382 ATPases associated with a variety of cellular activities RD09_RS13215 SM00959 Rho termination factor, N-terminal domain RD09_RS13255 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RD09_RS13255 SM00474 3'-5' exonuclease RD09_RS13255 SM00475 5'-3' exonuclease RD09_RS13255 SM00482 DNA polymerase A domain RD09_RS13295 SM00316 Ribosomal protein S1-like RNA-binding domain RD09_RS13305 SM00363 S4 RNA-binding domain RD09_RS13330 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD09_RS13405 SM00382 ATPases associated with a variety of cellular activities RD09_RS13410 SM00327 von Willebrand factor (vWF) type A domain RD09_RS13435 SM01005 Alanine racemase, C-terminal domain RD09_RS13470 SM00382 ATPases associated with a variety of cellular activities RD09_RS13535 SM00869 Autotransporter beta-domain RD09_RS13540 SM00869 Autotransporter beta-domain RD09_RS13550 SM00382 ATPases associated with a variety of cellular activities RD09_RS13550 SM01086 C-terminal, D2-small domain, of ClpB protein RD09_RS13555 SM00100 Cyclic nucleotide-monophosphate binding domain RD09_RS13555 SM00419 helix_turn_helix, cAMP Regulatory protein RD09_RS13625 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS13640 SM00382 ATPases associated with a variety of cellular activities RD09_RS13700 SM01007 Class II Aldolase and Adducin N-terminal domain RD09_RS13725 SM00822 RD09_RS13725 RD09_RS13735 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD09_RS13790 SM00822 RD09_RS13790 RD09_RS13805 SM00363 S4 RNA-binding domain RD09_RS13815 SM00491 RD09_RS13815 RD09_RS13820 SM00316 Ribosomal protein S1-like RNA-binding domain RD09_RS13820 SM00732 Likely ribonuclease with RNase H fold. RD09_RS13880 SM00861 Transketolase, pyrimidine binding domain RD09_RS13895 SM00344 helix_turn_helix ASNC type RD09_RS13905 SM00919 Malic enzyme, NAD binding domain RD09_RS13905 SM01274 RD09_RS13905 RD09_RS13925 SM00481 DNA polymerase alpha chain like domain RD09_RS13955 SM00869 Autotransporter beta-domain RD09_RS13965 SM00382 ATPases associated with a variety of cellular activities RD09_RS13985 SM00937 RD09_RS13985 RD09_RS13990 SM00822 RD09_RS13990 RD09_RS14015 SM00382 ATPases associated with a variety of cellular activities RD09_RS14035 SM00382 ATPases associated with a variety of cellular activities RD09_RS14045 SM00052 Putative diguanylate phosphodiesterase RD09_RS14045 SM00267 diguanylate cyclase RD09_RS14045 SM00387 Histidine kinase-like ATPases RD09_RS14045 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS14050 SM00448 cheY-homologous receiver domain RD09_RS14050 SM00862 Transcriptional regulatory protein, C terminal RD09_RS14070 SM00116 Domain in cystathionine beta-synthase and other proteins. RD09_RS14105 SM01103 RD09_RS14105 RD09_RS14115 SM00382 ATPases associated with a variety of cellular activities RD09_RS14160 SM00382 ATPases associated with a variety of cellular activities RD09_RS14185 SM00919 Malic enzyme, NAD binding domain RD09_RS14185 SM01274 RD09_RS14185 RD09_RS14235 SM00869 Autotransporter beta-domain RD09_RS14265 SM01323 RD09_RS14265 RD09_RS14290 SM00729 Elongator protein 3, MiaB family, Radical SAM RD09_RS14305 SM01091 Transporter associated domain RD09_RS14345 SM00448 cheY-homologous receiver domain RD09_RS14350 SM00448 cheY-homologous receiver domain RD09_RS14365 SM00260 Two component signalling adaptor domain RD09_RS14370 SM00073 Histidine Phosphotransfer domain RD09_RS14370 SM00260 Two component signalling adaptor domain RD09_RS14370 SM00387 Histidine kinase-like ATPases RD09_RS14370 SM01231 RD09_RS14370 RD09_RS14375 SM00448 cheY-homologous receiver domain RD09_RS14410 SM00316 Ribosomal protein S1-like RNA-binding domain RD09_RS14430 SM00852 Probable molybdopterin binding domain RD09_RS14450 SM00271 DnaJ molecular chaperone homology domain RD09_RS14500 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD09_RS14505 SM00861 Transketolase, pyrimidine binding domain RD09_RS14545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD09_RS14545 SM00091 PAS domain RD09_RS14545 SM00387 Histidine kinase-like ATPases RD09_RS14545 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS14550 SM00421 helix_turn_helix, Lux Regulon RD09_RS14550 SM00448 cheY-homologous receiver domain RD09_RS14595 SM00363 S4 RNA-binding domain RD09_RS14645 SM00729 Elongator protein 3, MiaB family, Radical SAM RD09_RS14665 SM00382 ATPases associated with a variety of cellular activities RD09_RS14700 SM00893 Electron transfer flavoprotein domain RD09_RS14705 SM00893 Electron transfer flavoprotein domain RD09_RS14755 SM00411 bacterial (prokaryotic) histone like domain RD09_RS14760 SM00316 Ribosomal protein S1-like RNA-binding domain RD09_RS14780 SM00830 Chorismate mutase type II RD09_RS14790 SM00434 DNA Topoisomerase IV RD09_RS14895 SM00382 ATPases associated with a variety of cellular activities RD09_RS14945 SM00878 Biotin carboxylase C-terminal domain RD09_RS14950 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS14950 SM00866 RD09_RS14950 RD09_RS15025 SM00382 ATPases associated with a variety of cellular activities RD09_RS15065 SM01387 RD09_RS15065 RD09_RS15070 SM00316 Ribosomal protein S1-like RNA-binding domain RD09_RS15070 SM00322 K homology RNA-binding domain RD09_RS15100 SM00829 Enoylreductase RD09_RS15125 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS15190 SM00450 Rhodanese Homology Domain RD09_RS15215 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS15275 SM00014 Acid phosphatase homologues RD09_RS15330 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD09_RS15335 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD09_RS15420 SM00487 DEAD-like helicases superfamily RD09_RS15420 SM00490 helicase superfamily c-terminal domain RD09_RS15420 SM00982 RD09_RS15420 RD09_RS15420 SM01058 CarD-like/TRCF domain RD09_RS15480 SM00382 ATPases associated with a variety of cellular activities RD09_RS15500 SM00829 Enoylreductase RD09_RS15505 SM00895 RD09_RS15505 RD09_RS15510 SM00869 Autotransporter beta-domain RD09_RS15515 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS15515 SM00895 RD09_RS15515 RD09_RS15545 SM00382 ATPases associated with a variety of cellular activities RD09_RS15560 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS15580 SM00382 ATPases associated with a variety of cellular activities RD09_RS15660 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RD09_RS15665 SM00862 Transcriptional regulatory protein, C terminal RD09_RS15670 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS15705 SM00965 Secretin and TonB N terminus short domain RD09_RS15710 SM00867 YceI-like domain RD09_RS15745 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS15765 SM00382 ATPases associated with a variety of cellular activities RD09_RS15830 SM00650 Ribosomal RNA adenine dimethylases RD09_RS15875 SM00382 ATPases associated with a variety of cellular activities RD09_RS15930 SM00448 cheY-homologous receiver domain RD09_RS15930 SM00862 Transcriptional regulatory protein, C terminal RD09_RS16160 SM00382 ATPases associated with a variety of cellular activities RD09_RS16165 SM00382 ATPases associated with a variety of cellular activities RD09_RS16190 SM00947 Carbonic anhydrase RD09_RS16205 SM00341 Helicase and RNase D C-terminal RD09_RS16205 SM00487 DEAD-like helicases superfamily RD09_RS16205 SM00490 helicase superfamily c-terminal domain RD09_RS16205 SM00956 RD09_RS16205 RD09_RS16210 SM00382 ATPases associated with a variety of cellular activities RD09_RS16225 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD09_RS16235 SM00798 AICARFT/IMPCHase bienzyme RD09_RS16235 SM00851 MGS-like domain RD09_RS16260 SM01011 Aminopeptidase P, N-terminal domain RD09_RS16335 SM00487 DEAD-like helicases superfamily RD09_RS16335 SM00490 helicase superfamily c-terminal domain RD09_RS16355 SM00852 Probable molybdopterin binding domain RD09_RS16360 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS16435 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS16435 SM00895 RD09_RS16435 RD09_RS16455 SM00919 Malic enzyme, NAD binding domain RD09_RS16455 SM01274 RD09_RS16455 RD09_RS16475 SM00382 ATPases associated with a variety of cellular activities RD09_RS16505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD09_RS16540 SM00382 ATPases associated with a variety of cellular activities RD09_RS16540 SM00962 SRP54-type protein, GTPase domain RD09_RS16540 SM00963 SRP54-type protein, helical bundle domain RD09_RS16545 SM00880 RD09_RS16545 RD09_RS16585 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS16625 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RD09_RS16645 SM00869 Autotransporter beta-domain RD09_RS16655 SM00883 Chaperonin 10 Kd subunit RD09_RS16710 SM00267 diguanylate cyclase RD09_RS16715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD09_RS16760 SM00155 Phospholipase D. Active site motifs. RD09_RS16795 SM01144 RD09_RS16795 RD09_RS16805 SM00316 Ribosomal protein S1-like RNA-binding domain RD09_RS16805 SM00357 Cold shock protein domain RD09_RS16805 SM00955 RD09_RS16805 RD09_RS16810 SM00967 RNA 2'-O ribose methyltransferase substrate binding RD09_RS16820 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RD09_RS16825 SM00411 bacterial (prokaryotic) histone like domain RD09_RS16850 SM00448 cheY-homologous receiver domain RD09_RS16850 SM00862 Transcriptional regulatory protein, C terminal RD09_RS16855 SM00387 Histidine kinase-like ATPases RD09_RS16855 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS16910 SM01130 RD09_RS16910 RD09_RS16915 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS16915 SM00895 RD09_RS16915 RD09_RS16930 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS16945 SM00387 Histidine kinase-like ATPases RD09_RS16945 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS16955 SM00448 cheY-homologous receiver domain RD09_RS16955 SM00862 Transcriptional regulatory protein, C terminal RD09_RS16965 SM00986 Uracil DNA glycosylase superfamily RD09_RS16965 SM00987 UreE urease accessory protein, C-terminal domain RD09_RS16975 SM00968 SMC proteins Flexible Hinge Domain RD09_RS16980 SM00771 ZipA, C-terminal domain (FtsZ-binding) RD09_RS16985 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD09_RS16985 SM00292 breast cancer carboxy-terminal domain RD09_RS16985 SM00532 Ligase N family RD09_RS17010 SM00382 ATPases associated with a variety of cellular activities RD09_RS17035 SM00382 ATPases associated with a variety of cellular activities RD09_RS17065 SM00382 ATPases associated with a variety of cellular activities RD09_RS17070 SM00382 ATPases associated with a variety of cellular activities RD09_RS17075 SM00478 endonuclease III RD09_RS17075 SM00525 RD09_RS17075 RD09_RS17120 SM00954 Region found in RelA / SpoT proteins RD09_RS17160 SM00316 Ribosomal protein S1-like RNA-binding domain RD09_RS17165 SM00363 S4 RNA-binding domain RD09_RS17235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD09_RS17250 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS17250 SM00895 RD09_RS17250 RD09_RS17260 SM00357 Cold shock protein domain RD09_RS17330 SM00838 Elongation factor G C-terminus RD09_RS17330 SM00889 Elongation factor G, domain IV RD09_RS17335 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS17365 SM00479 RD09_RS17365 RD09_RS17460 SM00450 Rhodanese Homology Domain RD09_RS17500 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS17505 SM00450 Rhodanese Homology Domain RD09_RS17570 SM00749 bacterial OsmY and nodulation domain RD09_RS17645 SM00845 GatB domain RD09_RS17660 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD09_RS17685 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS17705 SM01236 RD09_RS17705 RD09_RS17720 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS17720 SM00895 RD09_RS17720 RD09_RS17765 SM00965 Secretin and TonB N terminus short domain RD09_RS17785 SM00382 ATPases associated with a variety of cellular activities RD09_RS17810 SM00267 diguanylate cyclase RD09_RS17840 SM00849 Metallo-beta-lactamase superfamily RD09_RS17890 SM00563 Phosphate acyltransferases RD09_RS17905 SM00732 Likely ribonuclease with RNase H fold. RD09_RS17975 SM00382 ATPases associated with a variety of cellular activities RD09_RS17980 SM00382 ATPases associated with a variety of cellular activities RD09_RS18005 SM00347 helix_turn_helix multiple antibiotic resistance protein RD09_RS18055 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS18065 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS18095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD09_RS18175 SM00382 ATPases associated with a variety of cellular activities RD09_RS18180 SM00382 ATPases associated with a variety of cellular activities RD09_RS18260 SM00646 RD09_RS18260 RD09_RS18270 SM00853 MutL C terminal dimerisation domain RD09_RS18270 SM01340 RD09_RS18270 RD09_RS18285 SM00382 ATPases associated with a variety of cellular activities RD09_RS18325 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS18325 SM00895 RD09_RS18325 RD09_RS18390 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS18390 SM00895 RD09_RS18390 RD09_RS18420 SM00869 Autotransporter beta-domain RD09_RS18440 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS18445 SM00882 Coenzyme A transferase RD09_RS18450 SM00882 Coenzyme A transferase RD09_RS18500 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS18500 SM00895 RD09_RS18500 RD09_RS18595 SM00450 Rhodanese Homology Domain RD09_RS18640 SM00487 DEAD-like helicases superfamily RD09_RS18640 SM00490 helicase superfamily c-terminal domain RD09_RS18655 SM00382 ATPases associated with a variety of cellular activities RD09_RS18680 SM00978 RD09_RS18680 RD09_RS18690 SM00448 cheY-homologous receiver domain RD09_RS18690 SM00862 Transcriptional regulatory protein, C terminal RD09_RS18695 SM00091 PAS domain RD09_RS18695 SM00387 Histidine kinase-like ATPases RD09_RS18695 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS18700 SM00448 cheY-homologous receiver domain RD09_RS18700 SM00862 Transcriptional regulatory protein, C terminal RD09_RS18705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD09_RS18705 SM00387 Histidine kinase-like ATPases RD09_RS18705 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS18730 SM00796 Allophanate hydrolase subunit 1 RD09_RS18735 SM00797 Allophanate hydrolase subunit 2 RD09_RS18745 SM00346 helix_turn_helix isocitrate lyase regulation RD09_RS18780 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD09_RS18780 SM00895 RD09_RS18780 RD09_RS18835 SM00917 LeuA allosteric (dimerisation) domain RD09_RS18870 SM00382 ATPases associated with a variety of cellular activities RD09_RS18885 SM00984 UDP binding domain RD09_RS18975 SM00100 Cyclic nucleotide-monophosphate binding domain RD09_RS19000 SM00829 Enoylreductase RD09_RS19030 SM00382 ATPases associated with a variety of cellular activities RD09_RS19140 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS19230 SM00342 helix_turn_helix, arabinose operon control protein RD09_RS19345 SM00421 helix_turn_helix, Lux Regulon RD09_RS19385 SM00382 ATPases associated with a variety of cellular activities RD09_RS19400 SM00062 Bacterial periplasmic substrate-binding proteins RD09_RS19405 SM00382 ATPases associated with a variety of cellular activities RD09_RS19425 SM00478 endonuclease III RD09_RS19430 SM00530 Helix-turn-helix XRE-family like proteins RD09_RS19505 SM01060 RD09_RS19505 RD09_RS19515 SM00382 ATPases associated with a variety of cellular activities RD09_RS19535 SM00382 ATPases associated with a variety of cellular activities RD09_RS19540 SM00382 ATPases associated with a variety of cellular activities RD09_RS19570 SM00448 cheY-homologous receiver domain RD09_RS19570 SM00862 Transcriptional regulatory protein, C terminal RD09_RS19575 SM00387 Histidine kinase-like ATPases RD09_RS19575 SM00388 His Kinase A (phosphoacceptor) domain RD09_RS19600 SM00357 Cold shock protein domain