RD11_RS00005 IPR002218 Glucose-inhibited division protein A-related RD11_RS00005 IPR004416 Glucose-inhibited division protein A RD11_RS00005 IPR020595 Glucose-inhibited division protein A-related, conserved site RD11_RS00005 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS00005 IPR026904 GidA associated domain 3 RD11_RS00010 IPR003682 rRNA small subunit methyltransferase G RD11_RS00010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS00015 IPR025669 AAA domain RD11_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00020 IPR000182 GNAT domain RD11_RS00020 IPR016181 Acyl-CoA N-acyltransferase RD11_RS00025 IPR003115 ParB/Sulfiredoxin RD11_RS00025 IPR004437 ParB/RepB/Spo0J partition protein family RD11_RS00030 IPR006034 Asparaginase/glutaminase RD11_RS00030 IPR020827 Asparaginase/glutaminase, active site 1 RD11_RS00030 IPR027473 L-asparaginase, C-terminal domain RD11_RS00030 IPR027474 L-asparaginase, N-terminal RD11_RS00030 IPR027475 Asparaginase/glutaminase, active site 2 RD11_RS00035 IPR006034 Asparaginase/glutaminase RD11_RS00035 IPR027473 L-asparaginase, C-terminal domain RD11_RS00055 IPR000795 Elongation factor, GTP-binding domain RD11_RS00055 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RD11_RS00055 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD11_RS00055 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RD11_RS00055 IPR005225 Small GTP-binding protein domain RD11_RS00055 IPR009000 Translation protein, beta-barrel domain RD11_RS00055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RD11_RS00055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00055 IPR031157 RD11_RS00055 RD11_RS00065 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RD11_RS00065 IPR005807 SecE subunit of protein translocation complex RD11_RS00065 IPR022943 Preprotein translocase subunit SecE RD11_RS00070 IPR001062 Transcription antitermination protein, NusG RD11_RS00070 IPR005824 KOW RD11_RS00070 IPR006645 NusG, N-terminal RD11_RS00070 IPR008991 Translation protein SH3-like domain RD11_RS00070 IPR014722 Ribosomal protein L2 domain 2 RD11_RS00070 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RD11_RS00075 IPR000911 Ribosomal protein L11/L12 RD11_RS00075 IPR006519 Ribosomal protein L11, bacterial-type RD11_RS00075 IPR020783 Ribosomal protein L11, C-terminal RD11_RS00075 IPR020784 Ribosomal protein L11, N-terminal RD11_RS00075 IPR020785 Ribosomal protein L11, conserved site RD11_RS00080 IPR002143 Ribosomal protein L1 RD11_RS00080 IPR005878 Ribosomal protein L1, bacterial-type RD11_RS00080 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich RD11_RS00080 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RD11_RS00080 IPR023673 Ribosomal protein L1, conserved site RD11_RS00080 IPR023674 Ribosomal protein L1-like RD11_RS00080 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RD11_RS00085 IPR001790 Ribosomal protein L10/acidic P0 RD11_RS00085 IPR002363 Ribosomal protein L10, eubacterial, conserved site RD11_RS00085 IPR022973 Ribosomal protein L10 RD11_RS00090 IPR000206 Ribosomal protein L7/L12 RD11_RS00090 IPR008932 Ribosomal protein L7/L12, oligomerisation RD11_RS00090 IPR013823 Ribosomal protein L7/L12, C-terminal RD11_RS00090 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RD11_RS00095 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 RD11_RS00095 IPR007121 RNA polymerase, beta subunit, conserved site RD11_RS00095 IPR007641 RNA polymerase Rpb2, domain 7 RD11_RS00095 IPR007642 RNA polymerase Rpb2, domain 2 RD11_RS00095 IPR007644 RNA polymerase, beta subunit, protrusion RD11_RS00095 IPR007645 RNA polymerase Rpb2, domain 3 RD11_RS00095 IPR010243 DNA-directed RNA polymerase, beta subunit RD11_RS00095 IPR014724 RNA polymerase Rpb2, OB-fold RD11_RS00095 IPR015712 DNA-directed RNA polymerase, subunit 2 RD11_RS00095 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RD11_RS00100 IPR000722 RNA polymerase, alpha subunit RD11_RS00100 IPR006592 RNA polymerase, N-terminal RD11_RS00100 IPR007066 RNA polymerase Rpb1, domain 3 RD11_RS00100 IPR007080 RNA polymerase Rpb1, domain 1 RD11_RS00100 IPR007081 RNA polymerase Rpb1, domain 5 RD11_RS00100 IPR007083 RNA polymerase Rpb1, domain 4 RD11_RS00100 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RD11_RS00110 IPR011009 Protein kinase-like domain RD11_RS00120 IPR006860 FecR protein RD11_RS00120 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 RD11_RS00120 IPR018392 LysM domain RD11_RS00130 IPR001789 Signal transduction response regulator, receiver domain RD11_RS00130 IPR001867 Signal transduction response regulator, C-terminal RD11_RS00130 IPR011006 CheY-like superfamily RD11_RS00130 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00130 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS00135 IPR001584 Integrase, catalytic core RD11_RS00135 IPR009057 Homeodomain-like RD11_RS00135 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00135 IPR012337 Ribonuclease H-like domain RD11_RS00135 IPR024967 DNA-binding domain, IS481-type RD11_RS00140 IPR003673 CoA-transferase family III RD11_RS00140 IPR023606 CoA-transferase family III domain RD11_RS00145 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD11_RS00145 IPR012340 Nucleic acid-binding, OB-fold RD11_RS00145 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD11_RS00150 IPR002155 Thiolase RD11_RS00150 IPR016039 Thiolase-like RD11_RS00150 IPR020616 Thiolase, N-terminal RD11_RS00155 IPR002539 MaoC-like domain RD11_RS00155 IPR029069 HotDog domain RD11_RS00160 IPR000847 Transcription regulator HTH, LysR RD11_RS00160 IPR005119 LysR, substrate-binding RD11_RS00160 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00165 IPR001753 Crotonase superfamily RD11_RS00165 IPR029045 ClpP/crotonase-like domain RD11_RS00170 IPR005656 MmgE/PrpD RD11_RS00175 IPR001584 Integrase, catalytic core RD11_RS00175 IPR009057 Homeodomain-like RD11_RS00175 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00175 IPR012337 Ribonuclease H-like domain RD11_RS00175 IPR024967 DNA-binding domain, IS481-type RD11_RS00180 IPR011701 Major facilitator superfamily RD11_RS00180 IPR020846 Major facilitator superfamily domain RD11_RS00185 IPR002310 Glycine-tRNA ligase, alpha subunit RD11_RS00190 IPR008909 DALR anticodon binding RD11_RS00190 IPR015944 Glycine-tRNA ligase, beta subunit RD11_RS00195 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase RD11_RS00195 IPR006543 Histidinol-phosphate phosphatase RD11_RS00195 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RD11_RS00195 IPR023214 HAD-like domain RD11_RS00200 IPR002123 Phospholipid/glycerol acyltransferase RD11_RS00205 IPR002725 Protein of unknown function DUF45 RD11_RS00210 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD11_RS00210 IPR004361 Glyoxalase I RD11_RS00210 IPR018146 Glyoxalase I, conserved site RD11_RS00210 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS00215 IPR000181 Formylmethionine deformylase RD11_RS00215 IPR023635 Peptide deformylase RD11_RS00225 IPR001584 Integrase, catalytic core RD11_RS00225 IPR009057 Homeodomain-like RD11_RS00225 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00225 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00225 IPR012337 Ribonuclease H-like domain RD11_RS00225 IPR024967 DNA-binding domain, IS481-type RD11_RS00240 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS00240 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00240 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS00245 IPR004776 Auxin efflux carrier RD11_RS00250 IPR003767 Malate/L-lactate dehydrogenase RD11_RS00255 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS00255 IPR008220 Homoserine acetyltransferase RD11_RS00255 IPR029058 Alpha/Beta hydrolase fold RD11_RS00260 IPR010743 Methionine biosynthesis MetW RD11_RS00260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS00265 IPR001584 Integrase, catalytic core RD11_RS00265 IPR009057 Homeodomain-like RD11_RS00265 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00265 IPR012337 Ribonuclease H-like domain RD11_RS00265 IPR024967 DNA-binding domain, IS481-type RD11_RS00270 IPR011701 Major facilitator superfamily RD11_RS00270 IPR020846 Major facilitator superfamily domain RD11_RS00280 IPR001920 Asp/Glu racemase RD11_RS00280 IPR004380 Aspartate racemase RD11_RS00280 IPR015942 Asp/Glu/hydantoin racemase RD11_RS00280 IPR018187 Asp/Glu racemase, active site RD11_RS00285 IPR003439 ABC transporter-like RD11_RS00285 IPR003593 AAA+ ATPase domain RD11_RS00285 IPR017871 ABC transporter, conserved site RD11_RS00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00285 IPR030206 RD11_RS00285 RD11_RS00290 IPR000515 MetI-like domain RD11_RS00290 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS00290 IPR030205 RD11_RS00290 RD11_RS00295 IPR000515 MetI-like domain RD11_RS00295 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS00295 IPR030202 RD11_RS00295 RD11_RS00300 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS00305 IPR001584 Integrase, catalytic core RD11_RS00305 IPR009057 Homeodomain-like RD11_RS00305 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00305 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00305 IPR012337 Ribonuclease H-like domain RD11_RS00305 IPR024967 DNA-binding domain, IS481-type RD11_RS00315 IPR012893 HipA-like, C-terminal RD11_RS00315 IPR012894 HipA, N-terminal subdomain 2 RD11_RS00315 IPR017508 HipA, N-terminal subdomain 1 RD11_RS00320 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00330 IPR005064 Bordetella uptake gene RD11_RS00335 IPR002818 ThiJ/PfpI RD11_RS00335 IPR006286 Peptidase C56, PfpI RD11_RS00335 IPR029062 Class I glutamine amidotransferase-like RD11_RS00340 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS00345 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS00345 IPR001221 Phenol hydroxylase reductase RD11_RS00345 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS00345 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS00345 IPR008333 Oxidoreductase, FAD-binding domain RD11_RS00345 IPR012675 Beta-grasp domain RD11_RS00345 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS00350 IPR004681 TRAP transporter permease protein RD11_RS00350 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS00360 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS00365 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD11_RS00365 IPR032710 RD11_RS00365 RD11_RS00370 IPR001584 Integrase, catalytic core RD11_RS00370 IPR009057 Homeodomain-like RD11_RS00370 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00370 IPR012337 Ribonuclease H-like domain RD11_RS00370 IPR024967 DNA-binding domain, IS481-type RD11_RS00375 IPR009534 Protein of unknown function DUF1153 RD11_RS00375 IPR010921 Trp repressor/replication initiator RD11_RS00375 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00380 IPR001584 Integrase, catalytic core RD11_RS00380 IPR012337 Ribonuclease H-like domain RD11_RS00390 IPR001404 Heat shock protein Hsp90 family RD11_RS00390 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS00390 IPR019805 Heat shock protein Hsp90, conserved site RD11_RS00390 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS00390 IPR020575 Heat shock protein Hsp90, N-terminal RD11_RS00395 IPR004045 Glutathione S-transferase, N-terminal RD11_RS00395 IPR004046 Glutathione S-transferase, C-terminal RD11_RS00395 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS00395 IPR012336 Thioredoxin-like fold RD11_RS00400 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RD11_RS00405 IPR001781 Zinc finger, LIM-type RD11_RS00410 IPR002541 Cytochrome c assembly protein RD11_RS00415 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD11_RS00415 IPR003593 AAA+ ATPase domain RD11_RS00415 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RD11_RS00415 IPR004780 Signal recognition particle protein Ffh RD11_RS00415 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RD11_RS00415 IPR022941 Signal recognition particle, SRP54 subunit RD11_RS00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00420 IPR001584 Integrase, catalytic core RD11_RS00420 IPR009057 Homeodomain-like RD11_RS00420 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00420 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00420 IPR012337 Ribonuclease H-like domain RD11_RS00420 IPR024967 DNA-binding domain, IS481-type RD11_RS00425 IPR001584 Integrase, catalytic core RD11_RS00425 IPR009057 Homeodomain-like RD11_RS00425 IPR012337 Ribonuclease H-like domain RD11_RS00425 IPR024967 DNA-binding domain, IS481-type RD11_RS00430 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RD11_RS00430 IPR016040 NAD(P)-binding domain RD11_RS00440 IPR021260 Protein of unknown function DUF2837 RD11_RS00445 IPR001296 Glycosyl transferase, family 1 RD11_RS00445 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS00450 IPR003362 Bacterial sugar transferase RD11_RS00455 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RD11_RS00455 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS00455 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS00455 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS00460 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS00465 IPR003331 UDP-N-acetylglucosamine 2-epimerase RD11_RS00465 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type RD11_RS00470 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RD11_RS00470 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS00470 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS00470 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS00475 IPR001451 Bacterial transferase hexapeptide repeat RD11_RS00475 IPR011004 Trimeric LpxA-like RD11_RS00480 IPR000683 Oxidoreductase, N-terminal RD11_RS00480 IPR004104 Oxidoreductase, C-terminal RD11_RS00480 IPR016040 NAD(P)-binding domain RD11_RS00485 IPR002201 Glycosyl transferase, family 9 RD11_RS00485 IPR011908 Lipopolysaccharide heptosyltransferase I RD11_RS00490 IPR001296 Glycosyl transferase, family 1 RD11_RS00490 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal RD11_RS00500 IPR004619 Type III pantothenate kinase RD11_RS00505 IPR003142 Biotin protein ligase, C-terminal RD11_RS00505 IPR004143 Biotin/lipoate A/B protein ligase RD11_RS00505 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RD11_RS00505 IPR008988 Transcriptional repressor, C-terminal RD11_RS00510 IPR003453 Permease domain RD11_RS00510 IPR030802 RD11_RS00510 RD11_RS00515 IPR003439 ABC transporter-like RD11_RS00515 IPR003593 AAA+ ATPase domain RD11_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00530 IPR005586 Protein of unknown function DUF330 RD11_RS00535 IPR029058 Alpha/Beta hydrolase fold RD11_RS00540 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RD11_RS00540 IPR012338 Beta-lactamase/transpeptidase-like RD11_RS00540 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RD11_RS00540 IPR015956 Penicillin-binding protein-associated RD11_RS00540 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RD11_RS00545 IPR001544 Aminotransferase, class IV RD11_RS00550 IPR007454 Uncharacterised protein family UPF0250 RD11_RS00550 IPR027471 YbeD-like domain RD11_RS00555 IPR000544 Octanoyltransferase RD11_RS00555 IPR004143 Biotin/lipoate A/B protein ligase RD11_RS00555 IPR020605 Octanoyltransferase, conserved site RD11_RS00560 IPR003698 Lipoyl synthase RD11_RS00560 IPR006638 Elongator protein 3/MiaB/NifB RD11_RS00560 IPR007197 Radical SAM RD11_RS00560 IPR013785 Aldolase-type TIM barrel RD11_RS00560 IPR031691 RD11_RS00560 RD11_RS00565 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related RD11_RS00565 IPR011051 RmlC-like cupin domain RD11_RS00565 IPR014710 RmlC-like jelly roll fold RD11_RS00570 IPR005913 dTDP-4-dehydrorhamnose reductase RD11_RS00570 IPR016040 NAD(P)-binding domain RD11_RS00570 IPR029903 RD11_RS00570 RD11_RS00575 IPR005888 dTDP-glucose 4,6-dehydratase RD11_RS00575 IPR016040 NAD(P)-binding domain RD11_RS00575 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS00580 IPR001584 Integrase, catalytic core RD11_RS00580 IPR009057 Homeodomain-like RD11_RS00580 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00580 IPR012337 Ribonuclease H-like domain RD11_RS00580 IPR024967 DNA-binding domain, IS481-type RD11_RS00590 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD11_RS00590 IPR006233 Cystathionine beta-lyase, bacterial RD11_RS00590 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS00590 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS00590 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS00595 IPR001853 DSBA-like thioredoxin domain RD11_RS00595 IPR012336 Thioredoxin-like fold RD11_RS00595 IPR013766 Thioredoxin domain RD11_RS00595 IPR017937 Thioredoxin, conserved site RD11_RS00595 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RD11_RS00600 IPR007730 Sporulation-related domain RD11_RS00605 IPR001278 Arginine-tRNA ligase RD11_RS00605 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD11_RS00605 IPR005148 Arginyl tRNA synthetase N-terminal domain RD11_RS00605 IPR008909 DALR anticodon binding RD11_RS00605 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD11_RS00605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS00610 IPR014991 Protein of unknown function DUF1840 RD11_RS00620 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS00620 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS00625 IPR000515 MetI-like domain RD11_RS00630 IPR000515 MetI-like domain RD11_RS00640 IPR003439 ABC transporter-like RD11_RS00640 IPR003593 AAA+ ATPase domain RD11_RS00640 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS00640 IPR012340 Nucleic acid-binding, OB-fold RD11_RS00640 IPR013611 Transport-associated OB, type 2 RD11_RS00640 IPR017871 ABC transporter, conserved site RD11_RS00640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00645 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD11_RS00645 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RD11_RS00645 IPR029052 Metallo-dependent phosphatase-like RD11_RS00650 IPR001584 Integrase, catalytic core RD11_RS00650 IPR009057 Homeodomain-like RD11_RS00650 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00650 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00650 IPR012337 Ribonuclease H-like domain RD11_RS00650 IPR024967 DNA-binding domain, IS481-type RD11_RS00655 IPR003439 ABC transporter-like RD11_RS00655 IPR003593 AAA+ ATPase domain RD11_RS00655 IPR017871 ABC transporter, conserved site RD11_RS00655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00660 IPR000515 MetI-like domain RD11_RS00675 IPR028082 Periplasmic binding protein-like I RD11_RS00685 IPR000120 Amidase RD11_RS00685 IPR023631 Amidase signature domain RD11_RS00690 IPR000891 Pyruvate carboxyltransferase RD11_RS00690 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RD11_RS00690 IPR005668 2-isopropylmalate synthase RD11_RS00690 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RD11_RS00690 IPR013785 Aldolase-type TIM barrel RD11_RS00700 IPR000394 RNA polymerase sigma factor 54 RD11_RS00700 IPR007046 RNA polymerase sigma factor 54, core-binding RD11_RS00700 IPR007634 RNA polymerase sigma factor 54, DNA-binding RD11_RS00705 IPR007419 BFD-like [2Fe-2S]-binding domain RD11_RS00710 IPR000847 Transcription regulator HTH, LysR RD11_RS00710 IPR005119 LysR, substrate-binding RD11_RS00710 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00720 IPR001584 Integrase, catalytic core RD11_RS00720 IPR009057 Homeodomain-like RD11_RS00720 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00720 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00720 IPR012337 Ribonuclease H-like domain RD11_RS00720 IPR024967 DNA-binding domain, IS481-type RD11_RS00725 IPR023614 Porin domain RD11_RS00730 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RD11_RS00730 IPR001721 ACT-like domain RD11_RS00730 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD11_RS00730 IPR005787 Threonine dehydratase, biosynthetic RD11_RS00740 IPR004017 Cysteine-rich domain RD11_RS00740 IPR004113 FAD-linked oxidase, C-terminal RD11_RS00740 IPR006094 FAD linked oxidase, N-terminal RD11_RS00740 IPR009051 Alpha-helical ferredoxin RD11_RS00740 IPR016164 FAD-linked oxidase-like, C-terminal RD11_RS00740 IPR016166 FAD-binding, type 2 RD11_RS00740 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS00740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD11_RS00740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS00740 IPR021817 Protein of unknown function DUF3400 RD11_RS00740 IPR022153 Protein of unknown function DUF3683 RD11_RS00745 IPR000524 Transcription regulator HTH, GntR RD11_RS00745 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS00745 IPR011711 GntR, C-terminal RD11_RS00745 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00750 IPR003673 CoA-transferase family III RD11_RS00750 IPR023606 CoA-transferase family III domain RD11_RS00755 IPR002168 Lipase, GDXG, active site RD11_RS00755 IPR013094 Alpha/beta hydrolase fold-3 RD11_RS00755 IPR029058 Alpha/Beta hydrolase fold RD11_RS00760 IPR001753 Crotonase superfamily RD11_RS00760 IPR029045 ClpP/crotonase-like domain RD11_RS00765 IPR002938 Monooxygenase, FAD-binding RD11_RS00765 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS00770 IPR002938 Monooxygenase, FAD-binding RD11_RS00770 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS00775 IPR005064 Bordetella uptake gene RD11_RS00780 IPR005471 Transcription regulator IclR, N-terminal RD11_RS00780 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00780 IPR014757 Transcription regulator IclR, C-terminal RD11_RS00780 IPR029016 GAF domain-like RD11_RS00785 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RD11_RS00785 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD11_RS00790 IPR003778 Allophanate hydrolase subunit 2 RD11_RS00790 IPR029000 Cyclophilin-like domain RD11_RS00795 IPR003833 Allophanate hydrolase subunit 1 RD11_RS00795 IPR010016 Sensor histidine kinase inhibitor, KipI family RD11_RS00795 IPR024946 Arginine repressor C-terminal-like domain RD11_RS00795 IPR029000 Cyclophilin-like domain RD11_RS00800 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD11_RS00800 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS00805 IPR000847 Transcription regulator HTH, LysR RD11_RS00805 IPR005119 LysR, substrate-binding RD11_RS00805 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00810 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD11_RS00810 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD11_RS00810 IPR016040 NAD(P)-binding domain RD11_RS00810 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 RD11_RS00810 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD11_RS00810 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD11_RS00815 IPR007332 Protein of unknown function DUF411 RD11_RS00820 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS00820 IPR003660 HAMP linker domain RD11_RS00820 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS00820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS00820 IPR006290 Heavy metal sensor kinase RD11_RS00825 IPR001789 Signal transduction response regulator, receiver domain RD11_RS00825 IPR001867 Signal transduction response regulator, C-terminal RD11_RS00825 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response RD11_RS00825 IPR011006 CheY-like superfamily RD11_RS00825 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00830 IPR000014 PAS domain RD11_RS00830 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS00830 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS00830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS00830 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR RD11_RS00830 IPR021766 Protein of unknown function DUF3329 RD11_RS00835 IPR001789 Signal transduction response regulator, receiver domain RD11_RS00835 IPR001867 Signal transduction response regulator, C-terminal RD11_RS00835 IPR011006 CheY-like superfamily RD11_RS00835 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB RD11_RS00835 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00835 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS00840 IPR004033 UbiE/COQ5 methyltransferase RD11_RS00840 IPR023576 UbiE/COQ5 methyltransferase, conserved site RD11_RS00840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS00845 IPR007379 Tim44-like domain RD11_RS00845 IPR032710 RD11_RS00845 RD11_RS00850 IPR003033 SCP2 sterol-binding domain RD11_RS00855 IPR004147 UbiB domain RD11_RS00855 IPR010232 Probable protein kinase UbiB RD11_RS00855 IPR011009 Protein kinase-like domain RD11_RS00860 IPR009078 Ferritin-like superfamily RD11_RS00860 IPR012348 Ribonucleotide reductase-related RD11_RS00865 IPR001584 Integrase, catalytic core RD11_RS00865 IPR009057 Homeodomain-like RD11_RS00865 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00865 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS00865 IPR012337 Ribonuclease H-like domain RD11_RS00865 IPR024967 DNA-binding domain, IS481-type RD11_RS00870 IPR003439 ABC transporter-like RD11_RS00870 IPR003593 AAA+ ATPase domain RD11_RS00870 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS00870 IPR017871 ABC transporter, conserved site RD11_RS00870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00875 IPR007621 TPM domain RD11_RS00880 IPR007156 LemA RD11_RS00880 IPR023353 LemA-like domain RD11_RS00885 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD11_RS00885 IPR001650 Helicase, C-terminal RD11_RS00885 IPR011545 DEAD/DEAH box helicase domain RD11_RS00885 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00885 IPR028622 ATP-dependent RNA helicase RhlE RD11_RS00890 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD11_RS00895 IPR000795 Elongation factor, GTP-binding domain RD11_RS00895 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD11_RS00895 IPR004548 Peptide chain release factor 3 RD11_RS00895 IPR005225 Small GTP-binding protein domain RD11_RS00895 IPR009000 Translation protein, beta-barrel domain RD11_RS00895 IPR009022 Elongation factor G, III-V domain RD11_RS00895 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00895 IPR031157 RD11_RS00895 RD11_RS00895 IPR032090 RD11_RS00895 RD11_RS00905 IPR002024 Bacterioferritin RD11_RS00905 IPR008331 Ferritin/DPS protein domain RD11_RS00905 IPR009078 Ferritin-like superfamily RD11_RS00905 IPR012347 Ferritin-related RD11_RS00910 IPR001584 Integrase, catalytic core RD11_RS00910 IPR009057 Homeodomain-like RD11_RS00910 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00910 IPR012337 Ribonuclease H-like domain RD11_RS00910 IPR024967 DNA-binding domain, IS481-type RD11_RS00920 IPR005184 Domain of unknown function DUF306, Meta/HslJ RD11_RS00925 IPR005184 Domain of unknown function DUF306, Meta/HslJ RD11_RS00925 IPR025485 Domain of unknown function DUF4377 RD11_RS00930 IPR001763 Rhodanese-like domain RD11_RS00930 IPR020936 Uncharacterised protein family UPF0176 RD11_RS00935 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD11_RS00935 IPR002547 tRNA-binding domain RD11_RS00935 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal RD11_RS00935 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD11_RS00935 IPR012340 Nucleic acid-binding, OB-fold RD11_RS00935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS00935 IPR014758 Methionyl-tRNA synthetase RD11_RS00935 IPR015413 Methionyl/Leucyl tRNA synthetase RD11_RS00935 IPR023458 Methionine-tRNA ligase, type 1 RD11_RS00935 IPR029038 Methionyl-tRNA synthetase, Zn-domain RD11_RS00945 IPR000808 Mrp, conserved site RD11_RS00945 IPR002744 Domain of unknown function DUF59 RD11_RS00945 IPR019591 Mrp/NBP35 ATP-binding protein RD11_RS00945 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS00950 IPR000184 Bacterial surface antigen (D15) RD11_RS00955 IPR007452 Protein of unknown function DUF490 RD11_RS00960 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RD11_RS00960 IPR011962 Deoxycytidine triphosphate deaminase RD11_RS00960 IPR029054 dUTPase-like RD11_RS00965 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD11_RS00965 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS00970 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD11_RS00970 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS00975 IPR000182 GNAT domain RD11_RS00975 IPR016181 Acyl-CoA N-acyltransferase RD11_RS00985 IPR000310 Orn/Lys/Arg decarboxylase, major domain RD11_RS00985 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal RD11_RS00985 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal RD11_RS00985 IPR011193 Ornithine/lysine/arginine decarboxylase RD11_RS00985 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS00985 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS00985 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS00990 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RD11_RS00990 IPR023166 HI0933 insert-like domain RD11_RS00990 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS00995 IPR001584 Integrase, catalytic core RD11_RS00995 IPR009057 Homeodomain-like RD11_RS00995 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS00995 IPR012337 Ribonuclease H-like domain RD11_RS00995 IPR024967 DNA-binding domain, IS481-type RD11_RS01000 IPR001189 Manganese/iron superoxide dismutase RD11_RS01000 IPR019831 Manganese/iron superoxide dismutase, N-terminal RD11_RS01000 IPR019832 Manganese/iron superoxide dismutase, C-terminal RD11_RS01000 IPR019833 Manganese/iron superoxide dismutase, binding site RD11_RS01005 IPR003689 Zinc/iron permease RD11_RS01010 IPR006222 Glycine cleavage T-protein, N-terminal RD11_RS01010 IPR006223 Glycine cleavage system T protein RD11_RS01010 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RD11_RS01010 IPR022903 Glycine cleavage system T protein, bacteria RD11_RS01010 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD11_RS01010 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA RD11_RS01010 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RD11_RS01015 IPR002930 Glycine cleavage system H-protein RD11_RS01015 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD11_RS01015 IPR011053 Single hybrid motif RD11_RS01015 IPR017453 Glycine cleavage system H-protein, subgroup RD11_RS01020 IPR003437 Glycine cleavage system P protein, homodimeric RD11_RS01020 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS01020 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS01020 IPR020580 Glycine cleavage system P-protein, N-terminal RD11_RS01020 IPR020581 Glycine cleavage system P protein RD11_RS01025 IPR000524 Transcription regulator HTH, GntR RD11_RS01025 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS01025 IPR011711 GntR, C-terminal RD11_RS01025 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01030 IPR003673 CoA-transferase family III RD11_RS01030 IPR023606 CoA-transferase family III domain RD11_RS01035 IPR005064 Bordetella uptake gene RD11_RS01040 IPR001753 Crotonase superfamily RD11_RS01040 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS01040 IPR029045 ClpP/crotonase-like domain RD11_RS01045 IPR001584 Integrase, catalytic core RD11_RS01045 IPR009057 Homeodomain-like RD11_RS01045 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01045 IPR012337 Ribonuclease H-like domain RD11_RS01045 IPR024967 DNA-binding domain, IS481-type RD11_RS01050 IPR011690 Phosphate-starvation-induced PsiF repeat RD11_RS01055 IPR007325 Kynurenine formamidase RD11_RS01060 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS01060 IPR026968 3-oxoadipate enol-lactonase 1/2 RD11_RS01060 IPR029058 Alpha/Beta hydrolase fold RD11_RS01065 IPR005545 YCII-related RD11_RS01065 IPR011008 Dimeric alpha-beta barrel RD11_RS01070 IPR003464 Muconolactone delta-isomerase RD11_RS01070 IPR011008 Dimeric alpha-beta barrel RD11_RS01070 IPR026029 Muconolactone isomerase domain RD11_RS01075 IPR004165 Coenzyme A transferase family I RD11_RS01075 IPR012791 3-oxoacid CoA-transferase, subunit B RD11_RS01080 IPR004163 Coenzyme A transferase binding site RD11_RS01080 IPR004165 Coenzyme A transferase family I RD11_RS01080 IPR012792 3-oxoacid CoA-transferase, subunit A RD11_RS01085 IPR005471 Transcription regulator IclR, N-terminal RD11_RS01085 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01085 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RD11_RS01085 IPR014757 Transcription regulator IclR, C-terminal RD11_RS01085 IPR029016 GAF domain-like RD11_RS01090 IPR002347 Glucose/ribitol dehydrogenase RD11_RS01090 IPR016040 NAD(P)-binding domain RD11_RS01090 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS01095 IPR006160 Short chain fatty acid transporter AtoE RD11_RS01100 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD11_RS01100 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD11_RS01100 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS01100 IPR013328 Dehydrogenase, multihelical RD11_RS01100 IPR016040 NAD(P)-binding domain RD11_RS01100 IPR022694 3-hydroxyacyl-CoA dehydrogenase RD11_RS01105 IPR000209 Peptidase S8/S53 domain RD11_RS01105 IPR005546 Autotransporter beta-domain RD11_RS01105 IPR012332 P22 tailspike C-terminal domain-like RD11_RS01105 IPR013425 Autotransporter-associated beta strand repeat RD11_RS01105 IPR015500 Peptidase S8, subtilisin-related RD11_RS01105 IPR023828 Peptidase S8, subtilisin, Ser-active site RD11_RS01110 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS01110 IPR018129 Phosphoenolpyruvate carboxylase, active site RD11_RS01110 IPR021135 Phosphoenolpyruvate carboxylase RD11_RS01110 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type RD11_RS01110 IPR033129 RD11_RS01110 RD11_RS01115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS01115 IPR018317 Queuosine biosynthesis protein QueC RD11_RS01120 IPR016181 Acyl-CoA N-acyltransferase RD11_RS01125 IPR011042 Six-bladed beta-propeller, TolB-like RD11_RS01125 IPR011217 Streptogramin lyase RD11_RS01130 IPR001584 Integrase, catalytic core RD11_RS01130 IPR009057 Homeodomain-like RD11_RS01130 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01130 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01130 IPR012337 Ribonuclease H-like domain RD11_RS01130 IPR024967 DNA-binding domain, IS481-type RD11_RS01135 IPR000524 Transcription regulator HTH, GntR RD11_RS01135 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS01135 IPR011711 GntR, C-terminal RD11_RS01135 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01140 IPR004113 FAD-linked oxidase, C-terminal RD11_RS01140 IPR006094 FAD linked oxidase, N-terminal RD11_RS01140 IPR016164 FAD-linked oxidase-like, C-terminal RD11_RS01140 IPR016166 FAD-binding, type 2 RD11_RS01140 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS01140 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS01140 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD11_RS01145 IPR015590 Aldehyde dehydrogenase domain RD11_RS01145 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS01145 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS01145 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS01145 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS01145 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD11_RS01150 IPR002817 Thiamine biosynthesis protein ThiC RD11_RS01150 IPR025747 ThiC-associated domain RD11_RS01160 IPR019043 Restriction endonuclease, type II, HindIII RD11_RS01165 IPR001584 Integrase, catalytic core RD11_RS01165 IPR009057 Homeodomain-like RD11_RS01165 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01165 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01165 IPR012337 Ribonuclease H-like domain RD11_RS01165 IPR024967 DNA-binding domain, IS481-type RD11_RS01170 IPR001584 Integrase, catalytic core RD11_RS01170 IPR009057 Homeodomain-like RD11_RS01170 IPR012337 Ribonuclease H-like domain RD11_RS01170 IPR024967 DNA-binding domain, IS481-type RD11_RS01175 IPR001584 Integrase, catalytic core RD11_RS01175 IPR009057 Homeodomain-like RD11_RS01175 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01175 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01175 IPR012337 Ribonuclease H-like domain RD11_RS01175 IPR024967 DNA-binding domain, IS481-type RD11_RS01180 IPR002347 Glucose/ribitol dehydrogenase RD11_RS01180 IPR016040 NAD(P)-binding domain RD11_RS01180 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS01190 IPR003779 Carboxymuconolactone decarboxylase-like RD11_RS01190 IPR029032 AhpD-like RD11_RS01195 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD11_RS01195 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS01195 IPR013328 Dehydrogenase, multihelical RD11_RS01195 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD11_RS01195 IPR016040 NAD(P)-binding domain RD11_RS01195 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD11_RS01200 IPR000524 Transcription regulator HTH, GntR RD11_RS01200 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS01200 IPR011711 GntR, C-terminal RD11_RS01200 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01205 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS01210 IPR004681 TRAP transporter permease protein RD11_RS01210 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS01210 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS01220 IPR005064 Bordetella uptake gene RD11_RS01225 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RD11_RS01230 IPR002646 Poly A polymerase, head domain RD11_RS01230 IPR010206 Poly(A) polymerase I RD11_RS01230 IPR025866 Polymerase A arginine-rich C-terminal domain RD11_RS01230 IPR032828 RD11_RS01230 RD11_RS01235 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like RD11_RS01235 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RD11_RS01235 IPR023214 HAD-like domain RD11_RS01240 IPR003593 AAA+ ATPase domain RD11_RS01240 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RD11_RS01240 IPR017788 DnaA regulatory inactivator Hda RD11_RS01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS01245 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RD11_RS01245 IPR010918 AIR synthase-related protein, C-terminal domain RD11_RS01245 IPR016188 PurM, N-terminal-like RD11_RS01250 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase RD11_RS01250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS01255 IPR002099 DNA mismatch repair protein family RD11_RS01255 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS01255 IPR013507 DNA mismatch repair protein, C-terminal RD11_RS01255 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS01255 IPR014762 DNA mismatch repair, conserved site RD11_RS01255 IPR014790 MutL, C-terminal, dimerisation RD11_RS01255 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS01255 IPR020667 DNA mismatch repair protein, MutL RD11_RS01260 IPR032816 RD11_RS01260 RD11_RS01260 IPR032818 RD11_RS01260 RD11_RS01265 IPR002508 Cell wall hydrolase/autolysin, catalytic RD11_RS01265 IPR021731 AMIN domain RD11_RS01270 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RD11_RS01270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS01275 IPR000362 Fumarate lyase family RD11_RS01275 IPR005677 Fumarate hydratase, class II RD11_RS01275 IPR008948 L-Aspartase-like RD11_RS01275 IPR018951 Fumarase C, C-terminal RD11_RS01275 IPR020557 Fumarate lyase, conserved site RD11_RS01275 IPR022761 Fumarate lyase, N-terminal RD11_RS01275 IPR024083 Fumarase/histidase, N-terminal RD11_RS01280 IPR004776 Auxin efflux carrier RD11_RS01285 IPR005064 Bordetella uptake gene RD11_RS01290 IPR000847 Transcription regulator HTH, LysR RD11_RS01290 IPR005119 LysR, substrate-binding RD11_RS01290 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01295 IPR000101 Gamma-glutamyltranspeptidase RD11_RS01295 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS01300 IPR003673 CoA-transferase family III RD11_RS01300 IPR023606 CoA-transferase family III domain RD11_RS01305 IPR005064 Bordetella uptake gene RD11_RS01310 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS01310 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS01315 IPR001584 Integrase, catalytic core RD11_RS01315 IPR009057 Homeodomain-like RD11_RS01315 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01315 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01315 IPR012337 Ribonuclease H-like domain RD11_RS01315 IPR024967 DNA-binding domain, IS481-type RD11_RS01320 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS01320 IPR010917 TonB-dependent receptor, conserved site RD11_RS01325 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01325 IPR026282 DNA-binding protein, MJ1563 type RD11_RS01330 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RD11_RS01335 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RD11_RS01340 IPR011724 Cyd operon protein YbgT RD11_RS01340 IPR012994 Membrane bound YbgT-like RD11_RS01345 IPR003439 ABC transporter-like RD11_RS01345 IPR003593 AAA+ ATPase domain RD11_RS01345 IPR011527 ABC transporter type 1, transmembrane domain RD11_RS01345 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RD11_RS01345 IPR017871 ABC transporter, conserved site RD11_RS01345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS01350 IPR003439 ABC transporter-like RD11_RS01350 IPR003593 AAA+ ATPase domain RD11_RS01350 IPR011527 ABC transporter type 1, transmembrane domain RD11_RS01350 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC RD11_RS01350 IPR017871 ABC transporter, conserved site RD11_RS01350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS01355 IPR000836 Phosphoribosyltransferase domain RD11_RS01355 IPR005764 Adenine phosphoribosyl transferase RD11_RS01355 IPR029057 Phosphoribosyltransferase-like RD11_RS01365 IPR025421 Protein of unknown function DUF4148 RD11_RS01370 IPR002299 Porin, Neisseria sp. type RD11_RS01370 IPR023614 Porin domain RD11_RS01375 IPR001584 Integrase, catalytic core RD11_RS01375 IPR009057 Homeodomain-like RD11_RS01375 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01375 IPR012337 Ribonuclease H-like domain RD11_RS01375 IPR024967 DNA-binding domain, IS481-type RD11_RS01385 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RD11_RS01385 IPR017945 DHBP synthase RibB-like alpha/beta domain RD11_RS01390 IPR001214 SET domain RD11_RS01395 IPR021134 Bestrophin/UPF0187 RD11_RS01400 IPR000485 AsnC-type HTH domain RD11_RS01400 IPR011008 Dimeric alpha-beta barrel RD11_RS01400 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01400 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD11_RS01400 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS01400 IPR019888 Transcription regulator AsnC-type RD11_RS01405 IPR000399 TPP-binding enzyme, conserved site RD11_RS01405 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS01405 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS01405 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS01405 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD11_RS01405 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS01405 IPR029061 Thiamin diphosphate-binding fold RD11_RS01410 IPR002347 Glucose/ribitol dehydrogenase RD11_RS01410 IPR016040 NAD(P)-binding domain RD11_RS01415 IPR015590 Aldehyde dehydrogenase domain RD11_RS01415 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS01415 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS01415 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS01415 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS01415 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD11_RS01420 IPR002347 Glucose/ribitol dehydrogenase RD11_RS01420 IPR016040 NAD(P)-binding domain RD11_RS01420 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS01425 IPR000515 MetI-like domain RD11_RS01430 IPR003439 ABC transporter-like RD11_RS01430 IPR003593 AAA+ ATPase domain RD11_RS01430 IPR017871 ABC transporter, conserved site RD11_RS01430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS01435 IPR015168 SsuA/THI5-like RD11_RS01440 IPR000380 DNA topoisomerase, type IA RD11_RS01440 IPR003601 DNA topoisomerase, type IA, domain 2 RD11_RS01440 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RD11_RS01440 IPR005738 DNA topoisomerase III RD11_RS01440 IPR006171 Toprim domain RD11_RS01440 IPR013497 DNA topoisomerase, type IA, central RD11_RS01440 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RD11_RS01440 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RD11_RS01440 IPR023405 DNA topoisomerase, type IA, core domain RD11_RS01440 IPR023406 DNA topoisomerase, type IA, active site RD11_RS01440 IPR025589 Topoisomerase C-terminal repeat RD11_RS01445 IPR018677 Protein of unknown function DUF2157, membrane RD11_RS01445 IPR025513 Domain of unknown function DUF4401 RD11_RS01445 IPR025833 GDYXXLXY protein RD11_RS01455 IPR007456 Protein of unknown function DUF494 RD11_RS01460 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS01460 IPR010917 TonB-dependent receptor, conserved site RD11_RS01460 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RD11_RS01460 IPR011276 TonB-dependent haem/haemoglobin receptor RD11_RS01460 IPR012910 TonB-dependent receptor, plug RD11_RS01465 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS01465 IPR011853 TRAP transporter, 4TM/12TM fusion protein RD11_RS01470 IPR011852 TRAP transporter solute receptor, TAXI family RD11_RS01475 IPR001608 Alanine racemase, N-terminal RD11_RS01475 IPR026956 D-serine dehydratase-like domain RD11_RS01475 IPR029066 PLP-binding barrel RD11_RS01480 IPR005064 Bordetella uptake gene RD11_RS01485 IPR004636 Acetylornithine/Succinylornithine transaminase family RD11_RS01485 IPR005814 Aminotransferase class-III RD11_RS01485 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS01485 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS01485 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS01490 IPR023387 DUF1653-like domain RD11_RS01495 IPR000089 Biotin/lipoyl attachment RD11_RS01495 IPR001882 Biotin-binding site RD11_RS01495 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD11_RS01495 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD11_RS01495 IPR005482 Biotin carboxylase, C-terminal RD11_RS01495 IPR011053 Single hybrid motif RD11_RS01495 IPR011054 Rudiment single hybrid motif RD11_RS01495 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS01495 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS01495 IPR016185 Pre-ATP-grasp domain RD11_RS01500 IPR000022 Carboxyl transferase RD11_RS01500 IPR029045 ClpP/crotonase-like domain RD11_RS01505 IPR002155 Thiolase RD11_RS01505 IPR016039 Thiolase-like RD11_RS01505 IPR020610 Thiolase, active site RD11_RS01505 IPR020616 Thiolase, N-terminal RD11_RS01505 IPR020617 Thiolase, C-terminal RD11_RS01515 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS01515 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS01515 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS01515 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS01520 IPR001584 Integrase, catalytic core RD11_RS01520 IPR009057 Homeodomain-like RD11_RS01520 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01520 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01520 IPR012337 Ribonuclease H-like domain RD11_RS01520 IPR024967 DNA-binding domain, IS481-type RD11_RS01525 IPR001279 Beta-lactamase-like RD11_RS01530 IPR000551 MerR-type HTH domain RD11_RS01530 IPR009061 DNA binding domain, putative RD11_RS01535 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS01535 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS01540 IPR001584 Integrase, catalytic core RD11_RS01540 IPR009057 Homeodomain-like RD11_RS01540 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01540 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01540 IPR012337 Ribonuclease H-like domain RD11_RS01540 IPR024967 DNA-binding domain, IS481-type RD11_RS01550 IPR009057 Homeodomain-like RD11_RS01550 IPR010499 Bacterial transcription activator, effector binding RD11_RS01550 IPR011256 Regulatory factor, effector binding domain RD11_RS01550 IPR018060 DNA binding HTH domain, AraC-type RD11_RS01550 IPR018062 HTH domain AraC-type, conserved site RD11_RS01550 IPR020449 Transcription regulator HTH, AraC- type RD11_RS01550 IPR029442 GyrI-like small molecule binding domain RD11_RS01555 IPR000262 FMN-dependent dehydrogenase RD11_RS01555 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD11_RS01555 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD11_RS01555 IPR013785 Aldolase-type TIM barrel RD11_RS01565 IPR005064 Bordetella uptake gene RD11_RS01570 IPR000120 Amidase RD11_RS01570 IPR020556 Amidase, conserved site RD11_RS01570 IPR023631 Amidase signature domain RD11_RS01575 IPR005471 Transcription regulator IclR, N-terminal RD11_RS01575 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01575 IPR014757 Transcription regulator IclR, C-terminal RD11_RS01575 IPR029016 GAF domain-like RD11_RS01580 IPR000565 DNA topoisomerase, type IIA, subunit B RD11_RS01580 IPR001241 DNA topoisomerase, type IIA RD11_RS01580 IPR002288 DNA gyrase B subunit, C-terminal RD11_RS01580 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS01580 IPR006171 Toprim domain RD11_RS01580 IPR011557 DNA gyrase, subunit B RD11_RS01580 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RD11_RS01580 IPR013759 DNA topoisomerase, type IIA, central domain RD11_RS01580 IPR013760 DNA topoisomerase, type IIA-like domain RD11_RS01580 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS01580 IPR018522 DNA topoisomerase, type IIA, conserved site RD11_RS01580 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS01585 IPR001001 DNA polymerase III, beta chain RD11_RS01585 IPR022634 DNA polymerase III, beta chain, N-terminal RD11_RS01585 IPR022635 DNA polymerase III, beta chain, C-terminal RD11_RS01585 IPR022637 DNA polymerase III, beta chain, central RD11_RS01590 IPR001957 Chromosomal replication control, initiator DnaA RD11_RS01590 IPR003593 AAA+ ATPase domain RD11_RS01590 IPR010921 Trp repressor/replication initiator RD11_RS01590 IPR013159 Chromosomal replication initiator, DnaA C-terminal RD11_RS01590 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) RD11_RS01590 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RD11_RS01590 IPR020591 Chromosomal replication control, initiator DnaA-like RD11_RS01590 IPR024633 DnaA N-terminal domain RD11_RS01590 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS01595 IPR000271 Ribosomal protein L34 RD11_RS01595 IPR020939 Ribosomal protein L34, conserved site RD11_RS01600 IPR000100 Ribonuclease P RD11_RS01600 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS01600 IPR020539 Ribonuclease P, conserved site RD11_RS01600 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS01605 IPR002696 Putative membrane protein insertion efficiency factor RD11_RS01610 IPR001708 Membrane insertase OXA1/ALB3/YidC RD11_RS01610 IPR019998 Membrane insertase YidC RD11_RS01610 IPR028053 Membrane insertase YidC, N-terminal RD11_RS01610 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RD11_RS01615 IPR001584 Integrase, catalytic core RD11_RS01615 IPR009057 Homeodomain-like RD11_RS01615 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01615 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01615 IPR012337 Ribonuclease H-like domain RD11_RS01615 IPR024967 DNA-binding domain, IS481-type RD11_RS01620 IPR003680 Flavodoxin-like fold RD11_RS01620 IPR029039 Flavoprotein-like RD11_RS01625 IPR000847 Transcription regulator HTH, LysR RD11_RS01625 IPR005119 LysR, substrate-binding RD11_RS01625 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01635 IPR021597 Protein of unknown function DUF3220 RD11_RS01640 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS01640 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS01640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS01640 IPR013727 Two-component sensor kinase N-terminal RD11_RS01645 IPR002104 Integrase, catalytic RD11_RS01645 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD11_RS01645 IPR013762 Integrase-like, catalytic core RD11_RS01675 IPR011335 Restriction endonuclease type II-like RD11_RS01675 IPR011604 Exonuclease, phage-type/RecB, C-terminal RD11_RS01675 IPR019080 YqaJ viral recombinase RD11_RS01680 IPR004590 DNA single-strand annealing protein RecT RD11_RS01680 IPR018330 RecT family RD11_RS01705 IPR001584 Integrase, catalytic core RD11_RS01705 IPR009057 Homeodomain-like RD11_RS01705 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01705 IPR012337 Ribonuclease H-like domain RD11_RS01705 IPR024967 DNA-binding domain, IS481-type RD11_RS01720 IPR001584 Integrase, catalytic core RD11_RS01720 IPR009057 Homeodomain-like RD11_RS01720 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01720 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01720 IPR012337 Ribonuclease H-like domain RD11_RS01720 IPR024967 DNA-binding domain, IS481-type RD11_RS01725 IPR006175 YjgF/Yer057p/UK114 family RD11_RS01725 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS01730 IPR004046 Glutathione S-transferase, C-terminal RD11_RS01730 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS01730 IPR012336 Thioredoxin-like fold RD11_RS01735 IPR001107 Band 7 protein RD11_RS01735 IPR001972 Stomatin family RD11_RS01740 IPR010879 Domain of unknown function DUF1508 RD11_RS01745 IPR001608 Alanine racemase, N-terminal RD11_RS01745 IPR026956 D-serine dehydratase-like domain RD11_RS01745 IPR029066 PLP-binding barrel RD11_RS01750 IPR006439 HAD hydrolase, subfamily IA RD11_RS01750 IPR023214 HAD-like domain RD11_RS01755 IPR000847 Transcription regulator HTH, LysR RD11_RS01755 IPR005119 LysR, substrate-binding RD11_RS01755 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01760 IPR022000 Domain of unknown function (DUF3596) RD11_RS01770 IPR012556 Entericidin EcnAB RD11_RS01775 IPR005546 Autotransporter beta-domain RD11_RS01775 IPR006315 Outer membrane autotransporter barrel RD11_RS01775 IPR011050 Pectin lyase fold/virulence factor RD11_RS01775 IPR012332 P22 tailspike C-terminal domain-like RD11_RS01775 IPR013425 Autotransporter-associated beta strand repeat RD11_RS01780 IPR007247 Ureidoglycolate hydrolase RD11_RS01780 IPR011051 RmlC-like cupin domain RD11_RS01780 IPR024060 Ureidoglycolate hydrolase domain RD11_RS01785 IPR005064 Bordetella uptake gene RD11_RS01790 IPR000873 AMP-dependent synthetase/ligase RD11_RS01790 IPR020845 AMP-binding, conserved site RD11_RS01790 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS01795 IPR005471 Transcription regulator IclR, N-terminal RD11_RS01795 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01795 IPR014757 Transcription regulator IclR, C-terminal RD11_RS01795 IPR029016 GAF domain-like RD11_RS01800 IPR001753 Crotonase superfamily RD11_RS01800 IPR029045 ClpP/crotonase-like domain RD11_RS01805 IPR003779 Carboxymuconolactone decarboxylase-like RD11_RS01805 IPR004675 Alkylhydroperoxidase AhpD core RD11_RS01805 IPR029032 AhpD-like RD11_RS01810 IPR005064 Bordetella uptake gene RD11_RS01815 IPR001584 Integrase, catalytic core RD11_RS01815 IPR009057 Homeodomain-like RD11_RS01815 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01815 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01815 IPR012337 Ribonuclease H-like domain RD11_RS01815 IPR024967 DNA-binding domain, IS481-type RD11_RS01820 IPR006035 Ureohydrolase RD11_RS01820 IPR014033 Arginase RD11_RS01820 IPR020855 Ureohydrolase, manganese-binding site RD11_RS01820 IPR023696 Ureohydrolase domain RD11_RS01825 IPR005814 Aminotransferase class-III RD11_RS01825 IPR010164 Ornithine aminotransferase RD11_RS01825 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS01825 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS01825 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS01830 IPR001584 Integrase, catalytic core RD11_RS01830 IPR009057 Homeodomain-like RD11_RS01830 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01830 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01830 IPR012337 Ribonuclease H-like domain RD11_RS01830 IPR024967 DNA-binding domain, IS481-type RD11_RS01835 IPR000524 Transcription regulator HTH, GntR RD11_RS01835 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS01835 IPR011711 GntR, C-terminal RD11_RS01835 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01840 IPR005064 Bordetella uptake gene RD11_RS01845 IPR006076 FAD dependent oxidoreductase RD11_RS01845 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS01850 IPR004370 4-oxalocrotonate tautomerase RD11_RS01850 IPR014347 Tautomerase/MIF superfamily RD11_RS01855 IPR005839 Methylthiotransferase RD11_RS01855 IPR005840 Ribosomal protein S12 methylthiotransferase RimO RD11_RS01855 IPR006638 Elongator protein 3/MiaB/NifB RD11_RS01855 IPR007197 Radical SAM RD11_RS01855 IPR012340 Nucleic acid-binding, OB-fold RD11_RS01855 IPR013848 Methylthiotransferase, N-terminal RD11_RS01855 IPR020612 Methylthiotransferase, conserved site RD11_RS01855 IPR023404 Radical SAM, alpha/beta horseshoe RD11_RS01855 IPR023970 Methylthiotransferase/radical SAM-type protein RD11_RS01860 IPR002024 Bacterioferritin RD11_RS01860 IPR008331 Ferritin/DPS protein domain RD11_RS01860 IPR009078 Ferritin-like superfamily RD11_RS01860 IPR012347 Ferritin-related RD11_RS01860 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold RD11_RS01865 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RD11_RS01865 IPR031100 RD11_RS01865 RD11_RS01870 IPR032710 RD11_RS01870 RD11_RS01875 IPR023214 HAD-like domain RD11_RS01880 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD11_RS01880 IPR012349 FMN-binding split barrel RD11_RS01880 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent RD11_RS01885 IPR001555 Phosphoribosylglycinamide formyltransferase, active site RD11_RS01885 IPR002376 Formyl transferase, N-terminal RD11_RS01885 IPR005793 Formyl transferase, C-terminal RD11_RS01885 IPR005794 Methionyl-tRNA formyltransferase RD11_RS01885 IPR011034 Formyl transferase, C-terminal-like RD11_RS01890 IPR001584 Integrase, catalytic core RD11_RS01890 IPR009057 Homeodomain-like RD11_RS01890 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01890 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01890 IPR012337 Ribonuclease H-like domain RD11_RS01890 IPR024967 DNA-binding domain, IS481-type RD11_RS01895 IPR000181 Formylmethionine deformylase RD11_RS01895 IPR023635 Peptide deformylase RD11_RS01900 IPR000192 Aminotransferase class V domain RD11_RS01900 IPR010111 Kynureninase RD11_RS01900 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS01900 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS01900 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS01905 IPR000485 AsnC-type HTH domain RD11_RS01905 IPR011008 Dimeric alpha-beta barrel RD11_RS01905 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01905 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD11_RS01905 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS01905 IPR019888 Transcription regulator AsnC-type RD11_RS01910 IPR003488 DNA recombination-mediator protein A RD11_RS01915 IPR000891 Pyruvate carboxyltransferase RD11_RS01915 IPR013785 Aldolase-type TIM barrel RD11_RS01925 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS01925 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD11_RS01930 IPR004839 Aminotransferase, class I/classII RD11_RS01930 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS01930 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS01930 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS01935 IPR011078 Uncharacterised protein family UPF0001 RD11_RS01935 IPR029066 PLP-binding barrel RD11_RS01940 IPR005064 Bordetella uptake gene RD11_RS01945 IPR007410 DR1885-like metal-binding protein RD11_RS01950 IPR000847 Transcription regulator HTH, LysR RD11_RS01950 IPR005119 LysR, substrate-binding RD11_RS01950 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01950 IPR017685 Transcription regulator ArgP RD11_RS01955 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD11_RS01960 IPR001584 Integrase, catalytic core RD11_RS01960 IPR009057 Homeodomain-like RD11_RS01960 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS01960 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS01960 IPR012337 Ribonuclease H-like domain RD11_RS01960 IPR024967 DNA-binding domain, IS481-type RD11_RS01965 IPR025870 Glyoxalase-like domain RD11_RS01965 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS01970 IPR002811 Aspartate dehydrogenase RD11_RS01970 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD11_RS01970 IPR011182 L-aspartate dehydrogenase RD11_RS01970 IPR016040 NAD(P)-binding domain RD11_RS01970 IPR020626 L-aspartate dehydrogenase, prokaryotic RD11_RS01975 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD11_RS01980 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RD11_RS01980 IPR004573 rRNA small subunit methyltransferase B RD11_RS01980 IPR006027 NusB/RsmB/TIM44 RD11_RS01980 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RD11_RS01980 IPR023267 RNA (C5-cytosine) methyltransferase RD11_RS01980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS01985 IPR025500 Protein of unknown function DUF4390 RD11_RS01990 IPR000014 PAS domain RD11_RS01990 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS01990 IPR003660 HAMP linker domain RD11_RS01990 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS01990 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS01990 IPR013656 PAS fold-4 RD11_RS01990 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator RD11_RS01995 IPR001789 Signal transduction response regulator, receiver domain RD11_RS01995 IPR009057 Homeodomain-like RD11_RS01995 IPR011006 CheY-like superfamily RD11_RS02000 IPR003148 Regulator of K+ conductance, N-terminal RD11_RS02000 IPR006036 Potassium uptake protein TrkA RD11_RS02000 IPR006037 Regulator of K+ conductance, C-terminal RD11_RS02000 IPR016040 NAD(P)-binding domain RD11_RS02005 IPR003445 Cation transporter RD11_RS02005 IPR004772 Potassium uptake protein TrkH family RD11_RS02010 IPR000835 MarR-type HTH domain RD11_RS02010 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02015 IPR003777 XdhC- CoxI RD11_RS02015 IPR016185 Pre-ATP-grasp domain RD11_RS02015 IPR027051 XdhC Rossmann domain RD11_RS02020 IPR025877 MobA-like NTP transferase domain RD11_RS02020 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS02025 IPR006680 Amidohydrolase 1 RD11_RS02025 IPR032466 RD11_RS02025 RD11_RS02030 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RD11_RS02030 IPR028615 Maleate isomerase RD11_RS02035 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS02035 IPR029058 Alpha/Beta hydrolase fold RD11_RS02045 IPR000868 Isochorismatase-like RD11_RS02050 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD11_RS02050 IPR032710 RD11_RS02050 RD11_RS02055 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RD11_RS02055 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD11_RS02055 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD11_RS02055 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS02060 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD11_RS02060 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD11_RS02060 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS02060 IPR028202 Reductase, C-terminal RD11_RS02065 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS02070 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS02070 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD11_RS02075 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD11_RS02075 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD11_RS02080 IPR002346 Molybdopterin dehydrogenase, FAD-binding RD11_RS02080 IPR005107 CO dehydrogenase flavoprotein, C-terminal RD11_RS02080 IPR016166 FAD-binding, type 2 RD11_RS02080 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS02080 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS02085 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS02085 IPR002888 [2Fe-2S]-binding RD11_RS02085 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS02085 IPR010419 Carbon monoxide dehydrogenase subunit G RD11_RS02085 IPR012675 Beta-grasp domain RD11_RS02085 IPR023393 START-like domain RD11_RS02090 IPR015168 SsuA/THI5-like RD11_RS02090 IPR027939 NMT1/THI5 family RD11_RS02095 IPR003439 ABC transporter-like RD11_RS02095 IPR003593 AAA+ ATPase domain RD11_RS02095 IPR017871 ABC transporter, conserved site RD11_RS02095 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02100 IPR000515 MetI-like domain RD11_RS02105 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS02110 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS02115 IPR006336 Glutamate--cysteine ligase, GCS2 RD11_RS02115 IPR011793 Carboxylate-amine ligase, predicted RD11_RS02120 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RD11_RS02120 IPR013216 Methyltransferase type 11 RD11_RS02120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS02125 IPR000836 Phosphoribosyltransferase domain RD11_RS02125 IPR029057 Phosphoribosyltransferase-like RD11_RS02130 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD11_RS02130 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RD11_RS02130 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD11_RS02130 IPR029028 Alpha/beta knot methyltransferases RD11_RS02135 IPR005064 Bordetella uptake gene RD11_RS02140 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RD11_RS02140 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RD11_RS02140 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS02140 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RD11_RS02140 IPR013328 Dehydrogenase, multihelical RD11_RS02140 IPR016040 NAD(P)-binding domain RD11_RS02145 IPR003708 Bacterial protein export chaperone SecB RD11_RS02150 IPR002109 Glutaredoxin RD11_RS02150 IPR011767 Glutaredoxin active site RD11_RS02150 IPR011900 Glutaredoxin, GrxC RD11_RS02150 IPR012336 Thioredoxin-like fold RD11_RS02150 IPR014025 Glutaredoxin subgroup RD11_RS02155 IPR001763 Rhodanese-like domain RD11_RS02160 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RD11_RS02160 IPR005952 Phosphoglycerate mutase 1 RD11_RS02160 IPR013078 Histidine phosphatase superfamily, clade-1 RD11_RS02160 IPR029033 Histidine phosphatase superfamily RD11_RS02165 IPR011055 Duplicated hybrid motif RD11_RS02165 IPR016047 Peptidase M23 RD11_RS02170 IPR001478 PDZ domain RD11_RS02170 IPR004447 C-terminal-processing peptidase S41A RD11_RS02170 IPR005151 Tail specific protease RD11_RS02170 IPR029045 ClpP/crotonase-like domain RD11_RS02175 IPR000594 UBA/THIF-type NAD/FAD binding fold RD11_RS02175 IPR016040 NAD(P)-binding domain RD11_RS02180 IPR001584 Integrase, catalytic core RD11_RS02180 IPR009057 Homeodomain-like RD11_RS02180 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS02180 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02180 IPR012337 Ribonuclease H-like domain RD11_RS02180 IPR024967 DNA-binding domain, IS481-type RD11_RS02185 IPR005064 Bordetella uptake gene RD11_RS02190 IPR005471 Transcription regulator IclR, N-terminal RD11_RS02190 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02190 IPR014757 Transcription regulator IclR, C-terminal RD11_RS02190 IPR029016 GAF domain-like RD11_RS02200 IPR005064 Bordetella uptake gene RD11_RS02205 IPR006680 Amidohydrolase 1 RD11_RS02205 IPR032466 RD11_RS02205 RD11_RS02210 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS02210 IPR009057 Homeodomain-like RD11_RS02210 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS02210 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS02210 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD11_RS02215 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD11_RS02215 IPR006258 Dihydrolipoamide dehydrogenase RD11_RS02215 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD11_RS02215 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD11_RS02215 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS02220 IPR003439 ABC transporter-like RD11_RS02220 IPR003593 AAA+ ATPase domain RD11_RS02220 IPR017871 ABC transporter, conserved site RD11_RS02220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02225 IPR001851 ABC transporter, permease RD11_RS02225 IPR003439 ABC transporter-like RD11_RS02225 IPR003593 AAA+ ATPase domain RD11_RS02225 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02230 IPR001851 ABC transporter, permease RD11_RS02235 IPR000709 Leu/Ile/Val-binding protein RD11_RS02235 IPR028081 Leucine-binding protein domain RD11_RS02235 IPR028082 Periplasmic binding protein-like I RD11_RS02240 IPR005656 MmgE/PrpD RD11_RS02245 IPR000873 AMP-dependent synthetase/ligase RD11_RS02245 IPR020845 AMP-binding, conserved site RD11_RS02245 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS02250 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS02250 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS02250 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS02250 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS02250 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS02255 IPR000089 Biotin/lipoyl attachment RD11_RS02255 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD11_RS02255 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD11_RS02255 IPR011053 Single hybrid motif RD11_RS02255 IPR023213 Chloramphenicol acetyltransferase-like domain RD11_RS02260 IPR001753 Crotonase superfamily RD11_RS02260 IPR014748 Crontonase, C-terminal RD11_RS02260 IPR029045 ClpP/crotonase-like domain RD11_RS02265 IPR005475 Transketolase-like, pyrimidine-binding domain RD11_RS02265 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD11_RS02265 IPR029061 Thiamin diphosphate-binding fold RD11_RS02265 IPR033247 RD11_RS02265 RD11_RS02265 IPR033248 RD11_RS02265 RD11_RS02270 IPR001017 Dehydrogenase, E1 component RD11_RS02270 IPR029061 Thiamin diphosphate-binding fold RD11_RS02275 IPR005471 Transcription regulator IclR, N-terminal RD11_RS02275 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02275 IPR014757 Transcription regulator IclR, C-terminal RD11_RS02275 IPR029016 GAF domain-like RD11_RS02280 IPR001753 Crotonase superfamily RD11_RS02280 IPR003781 CoA-binding RD11_RS02280 IPR016040 NAD(P)-binding domain RD11_RS02280 IPR016102 Succinyl-CoA synthetase-like RD11_RS02280 IPR029045 ClpP/crotonase-like domain RD11_RS02280 IPR032875 RD11_RS02280 RD11_RS02285 IPR005064 Bordetella uptake gene RD11_RS02290 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS02290 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS02290 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS02290 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS02295 IPR001753 Crotonase superfamily RD11_RS02295 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS02295 IPR029045 ClpP/crotonase-like domain RD11_RS02300 IPR002155 Thiolase RD11_RS02300 IPR016039 Thiolase-like RD11_RS02300 IPR020616 Thiolase, N-terminal RD11_RS02305 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD11_RS02305 IPR012340 Nucleic acid-binding, OB-fold RD11_RS02305 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD11_RS02315 IPR002539 MaoC-like domain RD11_RS02315 IPR029069 HotDog domain RD11_RS02320 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS02320 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS02320 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS02320 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS02320 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS02325 IPR005064 Bordetella uptake gene RD11_RS02330 IPR003673 CoA-transferase family III RD11_RS02330 IPR023606 CoA-transferase family III domain RD11_RS02335 IPR000847 Transcription regulator HTH, LysR RD11_RS02335 IPR005119 LysR, substrate-binding RD11_RS02335 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02340 IPR002220 DapA-like RD11_RS02340 IPR013785 Aldolase-type TIM barrel RD11_RS02345 IPR001584 Integrase, catalytic core RD11_RS02345 IPR009057 Homeodomain-like RD11_RS02345 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS02345 IPR012337 Ribonuclease H-like domain RD11_RS02345 IPR024967 DNA-binding domain, IS481-type RD11_RS02350 IPR000795 Elongation factor, GTP-binding domain RD11_RS02350 IPR005225 Small GTP-binding protein domain RD11_RS02350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02350 IPR031157 RD11_RS02350 RD11_RS02355 IPR006015 Universal stress protein A RD11_RS02355 IPR006016 UspA RD11_RS02355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS02360 IPR005939 Beta-lactamase hydrolase-like RD11_RS02360 IPR029021 Protein-tyrosine phosphatase-like RD11_RS02365 IPR000524 Transcription regulator HTH, GntR RD11_RS02365 IPR004839 Aminotransferase, class I/classII RD11_RS02365 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02365 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS02365 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS02365 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS02370 IPR000640 Translation elongation factor EFG, V domain RD11_RS02370 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD11_RS02370 IPR004540 Translation elongation factor EFG/EF2 RD11_RS02370 IPR005517 Translation elongation factor EFG/EF2, domain IV RD11_RS02370 IPR009000 Translation protein, beta-barrel domain RD11_RS02370 IPR009022 Elongation factor G, III-V domain RD11_RS02370 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS02370 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS02370 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02375 IPR003416 MgtC/SapB/SrpB transporter RD11_RS02380 IPR005496 Integral membrane protein TerC RD11_RS02385 IPR003673 CoA-transferase family III RD11_RS02385 IPR023606 CoA-transferase family III domain RD11_RS02390 IPR001753 Crotonase superfamily RD11_RS02390 IPR029045 ClpP/crotonase-like domain RD11_RS02395 IPR005064 Bordetella uptake gene RD11_RS02400 IPR000847 Transcription regulator HTH, LysR RD11_RS02400 IPR005119 LysR, substrate-binding RD11_RS02400 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02405 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS02405 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS02405 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS02410 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS02415 IPR002155 Thiolase RD11_RS02415 IPR016039 Thiolase-like RD11_RS02415 IPR020616 Thiolase, N-terminal RD11_RS02415 IPR020617 Thiolase, C-terminal RD11_RS02425 IPR001584 Integrase, catalytic core RD11_RS02425 IPR009057 Homeodomain-like RD11_RS02425 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS02425 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02425 IPR012337 Ribonuclease H-like domain RD11_RS02425 IPR024967 DNA-binding domain, IS481-type RD11_RS02430 IPR001584 Integrase, catalytic core RD11_RS02430 IPR009057 Homeodomain-like RD11_RS02430 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS02430 IPR012337 Ribonuclease H-like domain RD11_RS02430 IPR024967 DNA-binding domain, IS481-type RD11_RS02435 IPR000847 Transcription regulator HTH, LysR RD11_RS02435 IPR005119 LysR, substrate-binding RD11_RS02435 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02440 IPR002059 Cold-shock protein, DNA-binding RD11_RS02440 IPR011129 Cold shock protein RD11_RS02440 IPR012156 Cold shock, CspA RD11_RS02440 IPR012340 Nucleic acid-binding, OB-fold RD11_RS02440 IPR019844 Cold-shock conserved site RD11_RS02450 IPR000524 Transcription regulator HTH, GntR RD11_RS02450 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS02450 IPR011711 GntR, C-terminal RD11_RS02450 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02455 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase RD11_RS02455 IPR015590 Aldehyde dehydrogenase domain RD11_RS02455 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS02455 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS02455 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS02455 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS02460 IPR006160 Short chain fatty acid transporter AtoE RD11_RS02465 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS02465 IPR001221 Phenol hydroxylase reductase RD11_RS02465 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS02465 IPR006656 Molybdopterin oxidoreductase RD11_RS02465 IPR006657 Molydopterin dinucleotide-binding domain RD11_RS02465 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RD11_RS02465 IPR008333 Oxidoreductase, FAD-binding domain RD11_RS02465 IPR009010 Aspartate decarboxylase-like domain RD11_RS02465 IPR012675 Beta-grasp domain RD11_RS02465 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS02470 IPR006175 YjgF/Yer057p/UK114 family RD11_RS02470 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS02475 IPR000847 Transcription regulator HTH, LysR RD11_RS02475 IPR005119 LysR, substrate-binding RD11_RS02475 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02480 IPR005064 Bordetella uptake gene RD11_RS02495 IPR003673 CoA-transferase family III RD11_RS02495 IPR023606 CoA-transferase family III domain RD11_RS02500 IPR002539 MaoC-like domain RD11_RS02500 IPR029069 HotDog domain RD11_RS02505 IPR000847 Transcription regulator HTH, LysR RD11_RS02505 IPR005119 LysR, substrate-binding RD11_RS02505 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02510 IPR003673 CoA-transferase family III RD11_RS02510 IPR023606 CoA-transferase family III domain RD11_RS02515 IPR001584 Integrase, catalytic core RD11_RS02515 IPR009057 Homeodomain-like RD11_RS02515 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS02515 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02515 IPR012337 Ribonuclease H-like domain RD11_RS02515 IPR024967 DNA-binding domain, IS481-type RD11_RS02520 IPR013130 Ferric reductase transmembrane component-like domain RD11_RS02520 IPR022837 Sulphoxide reductase heme-binding subunit YedZ RD11_RS02525 IPR000572 Oxidoreductase, molybdopterin-binding domain RD11_RS02525 IPR022867 Sulphoxide reductase catalytic subunit YedY RD11_RS02530 IPR006439 HAD hydrolase, subfamily IA RD11_RS02530 IPR023198 Phosphoglycolate phosphatase, domain 2 RD11_RS02530 IPR023214 HAD-like domain RD11_RS02535 IPR002942 RNA-binding S4 domain RD11_RS02535 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD11_RS02535 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RD11_RS02535 IPR006225 Pseudouridine synthase, RluC/RluD RD11_RS02535 IPR020103 Pseudouridine synthase, catalytic domain RD11_RS02540 IPR003029 Ribosomal protein S1, RNA-binding domain RD11_RS02540 IPR004659 Ribonuclease E/G RD11_RS02540 IPR012340 Nucleic acid-binding, OB-fold RD11_RS02540 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RD11_RS02540 IPR022967 RNA-binding domain, S1 RD11_RS02540 IPR028878 Ribonuclease E RD11_RS02545 IPR003199 Choloylglycine hydrolase/Peptidase C59 family RD11_RS02545 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS02545 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RD11_RS02550 IPR001584 Integrase, catalytic core RD11_RS02550 IPR009057 Homeodomain-like RD11_RS02550 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS02550 IPR012337 Ribonuclease H-like domain RD11_RS02550 IPR024967 DNA-binding domain, IS481-type RD11_RS02560 IPR000022 Carboxyl transferase RD11_RS02560 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RD11_RS02560 IPR029045 ClpP/crotonase-like domain RD11_RS02565 IPR002028 Tryptophan synthase, alpha chain RD11_RS02565 IPR011060 Ribulose-phosphate binding barrel RD11_RS02565 IPR013785 Aldolase-type TIM barrel RD11_RS02565 IPR018204 Tryptophan synthase, alpha chain, active site RD11_RS02570 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD11_RS02570 IPR006653 Tryptophan synthase, beta chain, conserved site RD11_RS02570 IPR006654 Tryptophan synthase, beta chain RD11_RS02570 IPR023026 Tryptophan synthase beta chain/beta chain-like RD11_RS02575 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD11_RS02575 IPR002933 Peptidase M20 RD11_RS02575 IPR010169 Acetylornithine deacetylase (ArgE) RD11_RS02575 IPR011650 Peptidase M20, dimerisation domain RD11_RS02580 IPR002912 ACT domain RD11_RS02580 IPR003607 HD/PDEase domain RD11_RS02580 IPR004095 TGS RD11_RS02580 IPR004811 RelA/SpoT family RD11_RS02580 IPR007685 RelA/SpoT RD11_RS02580 IPR012675 Beta-grasp domain RD11_RS02580 IPR012676 TGS-like RD11_RS02585 IPR010384 MtfA family RD11_RS02585 IPR024079 Metallopeptidase, catalytic domain RD11_RS02590 IPR005025 NADPH-dependent FMN reductase-like RD11_RS02590 IPR029039 Flavoprotein-like RD11_RS02595 IPR006175 YjgF/Yer057p/UK114 family RD11_RS02595 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS02595 IPR019897 YjgF-like protein, conserved site RD11_RS02600 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RD11_RS02600 IPR006406 Nicotinate phosphoribosyltransferase RD11_RS02600 IPR007229 Nicotinate phosphoribosyltransferase family RD11_RS02605 IPR000813 7Fe ferredoxin RD11_RS02605 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD11_RS02605 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS02605 IPR022569 Ferredoxin, C-terminal RD11_RS02610 IPR001221 Phenol hydroxylase reductase RD11_RS02610 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS02610 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD11_RS02610 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS02615 IPR009656 PHB de-polymerase, C-terminal RD11_RS02615 IPR010915 Polyhydroxyalkanoate depolymerase RD11_RS02615 IPR029058 Alpha/Beta hydrolase fold RD11_RS02620 IPR007202 4Fe-4S domain RD11_RS02620 IPR010207 Electron transport complex, RnfB RD11_RS02620 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS02625 IPR000445 Helix-hairpin-helix motif RD11_RS02625 IPR003265 HhH-GPD domain RD11_RS02625 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RD11_RS02625 IPR004035 Endonuclease III, iron-sulphur binding site RD11_RS02625 IPR004036 Endonuclease III-like, conserved site-2 RD11_RS02625 IPR005759 Endonuclease III RD11_RS02625 IPR011257 DNA glycosylase RD11_RS02625 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD11_RS02630 IPR003439 ABC transporter-like RD11_RS02630 IPR003593 AAA+ ATPase domain RD11_RS02630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02630 IPR032823 RD11_RS02630 RD11_RS02635 IPR003439 ABC transporter-like RD11_RS02635 IPR003593 AAA+ ATPase domain RD11_RS02635 IPR017871 ABC transporter, conserved site RD11_RS02635 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02640 IPR028081 Leucine-binding protein domain RD11_RS02640 IPR028082 Periplasmic binding protein-like I RD11_RS02645 IPR001851 ABC transporter, permease RD11_RS02650 IPR001851 ABC transporter, permease RD11_RS02655 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RD11_RS02660 IPR001544 Aminotransferase, class IV RD11_RS02665 IPR001851 ABC transporter, permease RD11_RS02665 IPR003439 ABC transporter-like RD11_RS02665 IPR003593 AAA+ ATPase domain RD11_RS02665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02670 IPR001851 ABC transporter, permease RD11_RS02675 IPR028081 Leucine-binding protein domain RD11_RS02675 IPR028082 Periplasmic binding protein-like I RD11_RS02680 IPR003784 BioY protein RD11_RS02685 IPR003339 ABC/ECF transporter, transmembrane component RD11_RS02690 IPR003439 ABC transporter-like RD11_RS02690 IPR003593 AAA+ ATPase domain RD11_RS02690 IPR017871 ABC transporter, conserved site RD11_RS02690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02695 IPR002579 Peptide methionine sulphoxide reductase MrsB RD11_RS02695 IPR011057 Mss4-like RD11_RS02695 IPR028427 Peptide methionine sulfoxide reductase RD11_RS02700 IPR006008 Intracellular septation protein A RD11_RS02705 IPR002634 BolA protein RD11_RS02710 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RD11_RS02715 IPR001357 BRCT domain RD11_RS02715 IPR001679 NAD-dependent DNA ligase RD11_RS02715 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD11_RS02715 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RD11_RS02715 IPR004150 NAD-dependent DNA ligase, OB-fold RD11_RS02715 IPR010994 RuvA domain 2-like RD11_RS02715 IPR012340 Nucleic acid-binding, OB-fold RD11_RS02715 IPR013839 NAD-dependent DNA ligase, adenylation RD11_RS02715 IPR013840 NAD-dependent DNA ligase, N-terminal RD11_RS02715 IPR018239 NAD-dependent DNA ligase, active site RD11_RS02715 IPR033136 RD11_RS02715 RD11_RS02720 IPR007449 ZipA, C-terminal FtsZ-binding domain RD11_RS02725 IPR003395 RecF/RecN/SMC, N-terminal RD11_RS02725 IPR010935 SMCs flexible hinge RD11_RS02725 IPR011890 Structural maintenance of chromosomes protein, prokaryotic RD11_RS02725 IPR024704 Structural maintenance of chromosomes protein RD11_RS02725 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS02730 IPR011701 Major facilitator superfamily RD11_RS02730 IPR020846 Major facilitator superfamily domain RD11_RS02735 IPR005122 Uracil-DNA glycosylase-like RD11_RS02735 IPR005273 Uracil-DNA glycosylase, family 4 domain RD11_RS02740 IPR000182 GNAT domain RD11_RS02740 IPR000905 Gcp-like domain RD11_RS02740 IPR006464 Ribosomal-protein-alanine acetyltransferase RD11_RS02740 IPR016181 Acyl-CoA N-acyltransferase RD11_RS02740 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ RD11_RS02745 IPR001789 Signal transduction response regulator, receiver domain RD11_RS02745 IPR001867 Signal transduction response regulator, C-terminal RD11_RS02745 IPR011006 CheY-like superfamily RD11_RS02745 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02745 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS02755 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS02755 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS02755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS02760 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD11_RS02760 IPR012336 Thioredoxin-like fold RD11_RS02760 IPR024706 Peroxiredoxin, AhpC-type RD11_RS02765 IPR003779 Carboxymuconolactone decarboxylase-like RD11_RS02765 IPR004674 Alkylhydroperoxidase AhpD RD11_RS02765 IPR004675 Alkylhydroperoxidase AhpD core RD11_RS02765 IPR029032 AhpD-like RD11_RS02770 IPR003313 AraC-type arabinose-binding/dimerisation domain RD11_RS02770 IPR009057 Homeodomain-like RD11_RS02770 IPR011051 RmlC-like cupin domain RD11_RS02770 IPR014710 RmlC-like jelly roll fold RD11_RS02770 IPR018060 DNA binding HTH domain, AraC-type RD11_RS02770 IPR018062 HTH domain AraC-type, conserved site RD11_RS02770 IPR020449 Transcription regulator HTH, AraC- type RD11_RS02775 IPR011701 Major facilitator superfamily RD11_RS02775 IPR020846 Major facilitator superfamily domain RD11_RS02780 IPR001584 Integrase, catalytic core RD11_RS02780 IPR010921 Trp repressor/replication initiator RD11_RS02780 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS02780 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02780 IPR012337 Ribonuclease H-like domain RD11_RS02780 IPR024967 DNA-binding domain, IS481-type RD11_RS02785 IPR000524 Transcription regulator HTH, GntR RD11_RS02785 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS02785 IPR011711 GntR, C-terminal RD11_RS02785 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02790 IPR002220 DapA-like RD11_RS02790 IPR013785 Aldolase-type TIM barrel RD11_RS02800 IPR005064 Bordetella uptake gene RD11_RS02805 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD11_RS02805 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD11_RS02805 IPR016040 NAD(P)-binding domain RD11_RS02805 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD11_RS02810 IPR002347 Glucose/ribitol dehydrogenase RD11_RS02810 IPR016040 NAD(P)-binding domain RD11_RS02815 IPR000847 Transcription regulator HTH, LysR RD11_RS02815 IPR005119 LysR, substrate-binding RD11_RS02815 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02820 IPR021969 Protein of unknown function DUF3579 RD11_RS02825 IPR004636 Acetylornithine/Succinylornithine transaminase family RD11_RS02825 IPR005814 Aminotransferase class-III RD11_RS02825 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS02825 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS02825 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS02830 IPR002292 Ornithine/putrescine carbamoyltransferase RD11_RS02830 IPR006130 Aspartate/ornithine carbamoyltransferase RD11_RS02830 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD11_RS02830 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD11_RS02830 IPR024904 Ornithine carbamoyltransferase RD11_RS02835 IPR001518 Argininosuccinate synthase RD11_RS02835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS02835 IPR018223 Argininosuccinate synthase, conserved site RD11_RS02835 IPR023437 Argininosuccinate synthase, type 2 subfamily RD11_RS02835 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail RD11_RS02835 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RD11_RS02840 IPR003855 K+ potassium transporter RD11_RS02840 IPR023051 Potassium uptake protein, low affinity, Kup RD11_RS02845 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS02845 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS02845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS02850 IPR001789 Signal transduction response regulator, receiver domain RD11_RS02850 IPR001867 Signal transduction response regulator, C-terminal RD11_RS02850 IPR011006 CheY-like superfamily RD11_RS02850 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS02855 IPR003400 Biopolymer transport protein ExbD/TolR RD11_RS02860 IPR002898 MotA/TolQ/ExbB proton channel RD11_RS02865 IPR003538 Gram-negative bacterial TonB protein RD11_RS02865 IPR006260 TonB, C-terminal RD11_RS02875 IPR000119 Histone-like bacterial DNA-binding protein RD11_RS02875 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD11_RS02875 IPR020816 Histone-like DNA-binding protein, conserved site RD11_RS02880 IPR005123 Oxoglutarate/iron-dependent dioxygenase RD11_RS02880 IPR006620 Prolyl 4-hydroxylase, alpha subunit RD11_RS02880 IPR023550 PKHD-type hydroxylase RD11_RS02885 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD11_RS02885 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS02885 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS02885 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS02890 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD11_RS02890 IPR004441 RNA methyltransferase TrmH family RD11_RS02890 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RD11_RS02890 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RD11_RS02890 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD11_RS02890 IPR029028 Alpha/beta knot methyltransferases RD11_RS02890 IPR029064 50S ribosomal protein L30e-like RD11_RS02895 IPR003029 Ribosomal protein S1, RNA-binding domain RD11_RS02895 IPR004476 Ribonuclease II/ribonuclease R RD11_RS02895 IPR011129 Cold shock protein RD11_RS02895 IPR011805 Ribonuclease R RD11_RS02895 IPR012340 Nucleic acid-binding, OB-fold RD11_RS02895 IPR013223 Ribonuclease B, N-terminal OB domain RD11_RS02895 IPR022966 Ribonuclease II/R, conserved site RD11_RS02895 IPR022967 RNA-binding domain, S1 RD11_RS02905 IPR005636 DTW RD11_RS02915 IPR000182 GNAT domain RD11_RS02915 IPR016181 Acyl-CoA N-acyltransferase RD11_RS02920 IPR004776 Auxin efflux carrier RD11_RS02925 IPR007272 Sulphur transport domain RD11_RS02930 IPR002932 Glutamate synthase domain RD11_RS02930 IPR013785 Aldolase-type TIM barrel RD11_RS02930 IPR024188 Glutamate synthase large subunit-like protein RD11_RS02930 IPR027283 Glutamate synthase large subunit-like protein, bacteria RD11_RS02935 IPR001584 Integrase, catalytic core RD11_RS02935 IPR009057 Homeodomain-like RD11_RS02935 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS02935 IPR012337 Ribonuclease H-like domain RD11_RS02935 IPR024967 DNA-binding domain, IS481-type RD11_RS02940 IPR001736 Phospholipase D/Transphosphatidylase RD11_RS02940 IPR025202 Phospholipase D-like domain RD11_RS02950 IPR017804 Methyltransferase EgtD-like RD11_RS02950 IPR019257 Histidine-specific methyltransferase, SAM-dependent RD11_RS02950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS02955 IPR005532 Formylglycine-generating sulphatase enzyme domain RD11_RS02955 IPR016187 C-type lectin fold RD11_RS02955 IPR017806 Ergothioneine biosynthesis protein EgtB RD11_RS02955 IPR024775 DinB-like domain RD11_RS02985 IPR003607 HD/PDEase domain RD11_RS02985 IPR006674 HD domain RD11_RS02990 IPR000160 GGDEF domain RD11_RS02990 IPR009050 Globin-like RD11_RS02990 IPR012292 Globin, structural domain RD11_RS02990 IPR029787 Nucleotide cyclase RD11_RS02995 IPR000868 Isochorismatase-like RD11_RS03000 IPR001584 Integrase, catalytic core RD11_RS03000 IPR009057 Homeodomain-like RD11_RS03000 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03000 IPR012337 Ribonuclease H-like domain RD11_RS03000 IPR024967 DNA-binding domain, IS481-type RD11_RS03005 IPR001584 Integrase, catalytic core RD11_RS03005 IPR009057 Homeodomain-like RD11_RS03005 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03005 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03005 IPR012337 Ribonuclease H-like domain RD11_RS03005 IPR024967 DNA-binding domain, IS481-type RD11_RS03010 IPR003953 FAD binding domain RD11_RS03010 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS03010 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD11_RS03015 IPR000847 Transcription regulator HTH, LysR RD11_RS03015 IPR005119 LysR, substrate-binding RD11_RS03015 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03020 IPR005064 Bordetella uptake gene RD11_RS03025 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD11_RS03025 IPR003953 FAD binding domain RD11_RS03025 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS03025 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD11_RS03030 IPR011008 Dimeric alpha-beta barrel RD11_RS03035 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RD11_RS03040 IPR011008 Dimeric alpha-beta barrel RD11_RS03045 IPR011032 GroES (chaperonin 10)-like RD11_RS03045 IPR018369 Chaperonin Cpn10, conserved site RD11_RS03045 IPR020818 Chaperonin Cpn10 RD11_RS03050 IPR001844 Chaperonin Cpn60 RD11_RS03050 IPR002423 Chaperonin Cpn60/TCP-1 RD11_RS03050 IPR018370 Chaperonin Cpn60, conserved site RD11_RS03050 IPR027409 GroEL-like apical domain RD11_RS03050 IPR027413 GroEL-like equatorial domain RD11_RS03055 IPR003991 Pertactin virulence factor family RD11_RS03055 IPR004899 Pertactin, central region RD11_RS03055 IPR005546 Autotransporter beta-domain RD11_RS03055 IPR006315 Outer membrane autotransporter barrel RD11_RS03055 IPR011050 Pectin lyase fold/virulence factor RD11_RS03055 IPR012332 P22 tailspike C-terminal domain-like RD11_RS03060 IPR017039 Virulence factor BrkB RD11_RS03065 IPR000829 Diacylglycerol kinase, prokaryotic RD11_RS03070 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS03075 IPR001754 Orotidine 5'-phosphate decarboxylase domain RD11_RS03075 IPR011060 Ribulose-phosphate binding barrel RD11_RS03075 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 RD11_RS03075 IPR013785 Aldolase-type TIM barrel RD11_RS03075 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RD11_RS03080 IPR008136 CinA, C-terminal RD11_RS03085 IPR007686 YutG/PgpA domain RD11_RS03085 IPR026037 Phosphatidylglycerophosphatase A RD11_RS03090 IPR006283 Thiamine-monophosphate kinase RD11_RS03090 IPR010918 AIR synthase-related protein, C-terminal domain RD11_RS03090 IPR016188 PurM, N-terminal-like RD11_RS03095 IPR006027 NusB/RsmB/TIM44 RD11_RS03095 IPR011605 NusB antitermination factor RD11_RS03100 IPR002180 6,7-dimethyl-8-ribityllumazine synthase RD11_RS03105 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RD11_RS03105 IPR017945 DHBP synthase RibB-like alpha/beta domain RD11_RS03105 IPR032677 RD11_RS03105 RD11_RS03110 IPR006379 HAD-superfamily hydrolase, subfamily IIB RD11_RS03110 IPR023214 HAD-like domain RD11_RS03115 IPR005471 Transcription regulator IclR, N-terminal RD11_RS03115 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03115 IPR014757 Transcription regulator IclR, C-terminal RD11_RS03115 IPR029016 GAF domain-like RD11_RS03120 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein RD11_RS03125 IPR003439 ABC transporter-like RD11_RS03125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03130 IPR001584 Integrase, catalytic core RD11_RS03130 IPR009057 Homeodomain-like RD11_RS03130 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03130 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03130 IPR012337 Ribonuclease H-like domain RD11_RS03130 IPR024967 DNA-binding domain, IS481-type RD11_RS03135 IPR003439 ABC transporter-like RD11_RS03135 IPR017871 ABC transporter, conserved site RD11_RS03135 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03140 IPR000515 MetI-like domain RD11_RS03140 IPR005769 ABC transporter, permease PhnE/PtxC RD11_RS03145 IPR000515 MetI-like domain RD11_RS03145 IPR005769 ABC transporter, permease PhnE/PtxC RD11_RS03150 IPR023577 CYTH-like domain RD11_RS03150 IPR033469 RD11_RS03150 RD11_RS03155 IPR007899 CHAD RD11_RS03160 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD11_RS03160 IPR003593 AAA+ ATPase domain RD11_RS03160 IPR004390 Signal-recognition particle receptor FtsY RD11_RS03160 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle RD11_RS03160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03165 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD11_RS03165 IPR004398 RNA methyltransferase, RsmD RD11_RS03165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS03170 IPR001980 Coenzyme A biosynthesis protein RD11_RS03170 IPR004821 Cytidyltransferase-like domain RD11_RS03170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS03175 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD11_RS03175 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS03180 IPR004711 Benzoate transporter RD11_RS03185 IPR005303 MOSC, N-terminal beta barrel RD11_RS03190 IPR007844 AsmA RD11_RS03195 IPR001845 HTH ArsR-type DNA-binding domain RD11_RS03195 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03200 IPR013538 Activator of Hsp90 ATPase homologue 1-like RD11_RS03200 IPR023393 START-like domain RD11_RS03210 IPR000847 Transcription regulator HTH, LysR RD11_RS03210 IPR005119 LysR, substrate-binding RD11_RS03210 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03215 IPR009197 Microcystin LR degradation protein MlrC RD11_RS03215 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD11_RS03215 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD11_RS03225 IPR003439 ABC transporter-like RD11_RS03225 IPR003593 AAA+ ATPase domain RD11_RS03225 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS03225 IPR017871 ABC transporter, conserved site RD11_RS03225 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03230 IPR000515 MetI-like domain RD11_RS03235 IPR000515 MetI-like domain RD11_RS03240 IPR000847 Transcription regulator HTH, LysR RD11_RS03240 IPR005119 LysR, substrate-binding RD11_RS03240 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03245 IPR002505 Phosphate acetyl/butaryl transferase RD11_RS03245 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD11_RS03245 IPR012301 Malic enzyme, N-terminal domain RD11_RS03245 IPR012302 Malic enzyme, NAD-binding RD11_RS03245 IPR016040 NAD(P)-binding domain RD11_RS03250 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD11_RS03255 IPR005064 Bordetella uptake gene RD11_RS03260 IPR000399 TPP-binding enzyme, conserved site RD11_RS03260 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS03260 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS03260 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS03260 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS03260 IPR029061 Thiamin diphosphate-binding fold RD11_RS03265 IPR000524 Transcription regulator HTH, GntR RD11_RS03265 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS03265 IPR011711 GntR, C-terminal RD11_RS03265 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03270 IPR001584 Integrase, catalytic core RD11_RS03270 IPR009057 Homeodomain-like RD11_RS03270 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03270 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03270 IPR012337 Ribonuclease H-like domain RD11_RS03270 IPR024967 DNA-binding domain, IS481-type RD11_RS03275 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD11_RS03295 IPR021332 Protein of unknown function DUF2944 RD11_RS03300 IPR032808 RD11_RS03300 RD11_RS03305 IPR000847 Transcription regulator HTH, LysR RD11_RS03305 IPR005119 LysR, substrate-binding RD11_RS03305 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03310 IPR000086 NUDIX hydrolase domain RD11_RS03310 IPR015797 NUDIX hydrolase domain-like RD11_RS03310 IPR020084 NUDIX hydrolase, conserved site RD11_RS03310 IPR029401 Nudix hydrolase, N-terminal RD11_RS03315 IPR007471 Arginine-tRNA-protein transferase, N-terminal RD11_RS03315 IPR007472 Arginine-tRNA-protein transferase, C-terminal RD11_RS03315 IPR016181 Acyl-CoA N-acyltransferase RD11_RS03315 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic RD11_RS03315 IPR030700 RD11_RS03315 RD11_RS03320 IPR001295 Dihydroorotate dehydrogenase, conserved site RD11_RS03320 IPR005719 Dihydroorotate dehydrogenase, class 2 RD11_RS03320 IPR005720 Dihydroorotate dehydrogenase domain RD11_RS03320 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 RD11_RS03320 IPR013785 Aldolase-type TIM barrel RD11_RS03325 IPR010127 Phasin, subfamily 1 RD11_RS03325 IPR018968 Phasin RD11_RS03330 IPR005064 Bordetella uptake gene RD11_RS03335 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain RD11_RS03335 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD11_RS03340 IPR005471 Transcription regulator IclR, N-terminal RD11_RS03340 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03340 IPR014757 Transcription regulator IclR, C-terminal RD11_RS03340 IPR029016 GAF domain-like RD11_RS03345 IPR001453 Molybdopterin binding domain RD11_RS03350 IPR001584 Integrase, catalytic core RD11_RS03350 IPR009057 Homeodomain-like RD11_RS03350 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03350 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03350 IPR012337 Ribonuclease H-like domain RD11_RS03350 IPR024967 DNA-binding domain, IS481-type RD11_RS03360 IPR012336 Thioredoxin-like fold RD11_RS03360 IPR013766 Thioredoxin domain RD11_RS03365 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD11_RS03365 IPR001650 Helicase, C-terminal RD11_RS03365 IPR011545 DEAD/DEAH box helicase domain RD11_RS03365 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS03365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03370 IPR008407 Branched-chain amino acid transport, AzlD RD11_RS03375 IPR011606 Branched-chain amino acid transport, permease RD11_RS03380 IPR001544 Aminotransferase, class IV RD11_RS03380 IPR005785 Branched-chain amino acid aminotransferase I RD11_RS03385 IPR019401 Zinc finger, CHCC-type RD11_RS03390 IPR009959 Polyketide cyclase SnoaL-like domain RD11_RS03390 IPR032710 RD11_RS03390 RD11_RS03395 IPR012020 AB-hydrolase YheT, putative RD11_RS03395 IPR022742 Putative lysophospholipase RD11_RS03395 IPR029058 Alpha/Beta hydrolase fold RD11_RS03400 IPR001915 Peptidase M48 RD11_RS03400 IPR011990 Tetratricopeptide-like helical domain RD11_RS03400 IPR030873 RD11_RS03400 RD11_RS03405 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RD11_RS03405 IPR005835 Nucleotidyl transferase RD11_RS03405 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS03410 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related RD11_RS03415 IPR002299 Porin, Neisseria sp. type RD11_RS03415 IPR023614 Porin domain RD11_RS03420 IPR001584 Integrase, catalytic core RD11_RS03420 IPR009057 Homeodomain-like RD11_RS03420 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03420 IPR012337 Ribonuclease H-like domain RD11_RS03420 IPR024967 DNA-binding domain, IS481-type RD11_RS03425 IPR001584 Integrase, catalytic core RD11_RS03425 IPR009057 Homeodomain-like RD11_RS03425 IPR012337 Ribonuclease H-like domain RD11_RS03425 IPR024967 DNA-binding domain, IS481-type RD11_RS03435 IPR004837 Sodium/calcium exchanger membrane region RD11_RS03440 IPR000994 Peptidase M24, structural domain RD11_RS03440 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RD11_RS03440 IPR007865 Aminopeptidase P, N-terminal RD11_RS03440 IPR028980 Creatinase/Aminopeptidase P, N-terminal RD11_RS03440 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RD11_RS03450 IPR002938 Monooxygenase, FAD-binding RD11_RS03450 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RD11_RS03450 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RD11_RS03450 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS03455 IPR001269 tRNA-dihydrouridine synthase RD11_RS03455 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RD11_RS03455 IPR013785 Aldolase-type TIM barrel RD11_RS03455 IPR018517 tRNA-dihydrouridine synthase, conserved site RD11_RS03455 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RD11_RS03455 IPR032887 RD11_RS03455 RD11_RS03460 IPR002197 DNA binding HTH domain, Fis-type RD11_RS03460 IPR005412 DNA-binding protein Fis RD11_RS03460 IPR009057 Homeodomain-like RD11_RS03465 IPR002695 AICARFT/IMPCHase bienzyme RD11_RS03465 IPR011607 Methylglyoxal synthase-like domain RD11_RS03465 IPR016193 Cytidine deaminase-like RD11_RS03465 IPR024051 AICAR transformylase domain RD11_RS03470 IPR002176 Crossover junction endodeoxyribonuclease RuvC RD11_RS03470 IPR012337 Ribonuclease H-like domain RD11_RS03470 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RD11_RS03475 IPR000085 Bacterial DNA recombination protein RuvA RD11_RS03475 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD11_RS03475 IPR010994 RuvA domain 2-like RD11_RS03475 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal RD11_RS03475 IPR012340 Nucleic acid-binding, OB-fold RD11_RS03475 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RD11_RS03480 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD11_RS03480 IPR016040 NAD(P)-binding domain RD11_RS03485 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD11_RS03490 IPR003593 AAA+ ATPase domain RD11_RS03490 IPR004605 DNA helicase, Holliday junction RuvB type RD11_RS03490 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal RD11_RS03490 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal RD11_RS03490 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03495 IPR001650 Helicase, C-terminal RD11_RS03495 IPR002121 HRDC domain RD11_RS03495 IPR004589 DNA helicase, ATP-dependent, RecQ type RD11_RS03495 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial RD11_RS03495 IPR010997 HRDC-like RD11_RS03495 IPR011545 DEAD/DEAH box helicase domain RD11_RS03495 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03495 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS03495 IPR018982 RQC domain RD11_RS03495 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03495 IPR032284 RD11_RS03495 RD11_RS03500 IPR001584 Integrase, catalytic core RD11_RS03500 IPR009057 Homeodomain-like RD11_RS03500 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03500 IPR012337 Ribonuclease H-like domain RD11_RS03500 IPR024967 DNA-binding domain, IS481-type RD11_RS03510 IPR001765 Carbonic anhydrase RD11_RS03510 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site RD11_RS03515 IPR000120 Amidase RD11_RS03515 IPR020556 Amidase, conserved site RD11_RS03515 IPR023631 Amidase signature domain RD11_RS03520 IPR028081 Leucine-binding protein domain RD11_RS03520 IPR028082 Periplasmic binding protein-like I RD11_RS03525 IPR001851 ABC transporter, permease RD11_RS03530 IPR001851 ABC transporter, permease RD11_RS03535 IPR003439 ABC transporter-like RD11_RS03535 IPR003593 AAA+ ATPase domain RD11_RS03535 IPR017871 ABC transporter, conserved site RD11_RS03535 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03535 IPR032823 RD11_RS03535 RD11_RS03540 IPR003439 ABC transporter-like RD11_RS03540 IPR003593 AAA+ ATPase domain RD11_RS03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03545 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RD11_RS03545 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RD11_RS03550 IPR008318 Uncharacterised conserved protein UCP030820 RD11_RS03555 IPR004872 Lipoprotein NlpA family RD11_RS03565 IPR001584 Integrase, catalytic core RD11_RS03565 IPR009057 Homeodomain-like RD11_RS03565 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03565 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03565 IPR012337 Ribonuclease H-like domain RD11_RS03565 IPR024967 DNA-binding domain, IS481-type RD11_RS03575 IPR015927 Peptidase S24/S26A/S26B/S26C RD11_RS03575 IPR028360 Peptidase S24/S26, beta-ribbon domain RD11_RS03595 IPR001584 Integrase, catalytic core RD11_RS03595 IPR009057 Homeodomain-like RD11_RS03595 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03595 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03595 IPR012337 Ribonuclease H-like domain RD11_RS03595 IPR024967 DNA-binding domain, IS481-type RD11_RS03605 IPR004921 Terminase, large subunit RD11_RS03610 IPR025129 Domain of unknown function DUF4055 RD11_RS03615 IPR006528 Phage head morphogenesis domain RD11_RS03615 IPR017029 Putative phage head morphogenesis protein RD11_RS03635 IPR001584 Integrase, catalytic core RD11_RS03635 IPR009057 Homeodomain-like RD11_RS03635 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03635 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03635 IPR012337 Ribonuclease H-like domain RD11_RS03635 IPR024967 DNA-binding domain, IS481-type RD11_RS03670 IPR025395 Protein of unknown function DUF4128 RD11_RS03675 IPR003615 HNH nuclease RD11_RS03675 IPR016177 DNA-binding domain RD11_RS03680 IPR014918 Bacteriophage T1, Orf41 RD11_RS03685 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RD11_RS03685 IPR014859 Protein of unknown function DUF1789 RD11_RS03690 IPR014915 Bacteriophage TLS, TfmB RD11_RS03695 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal RD11_RS03695 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal RD11_RS03705 IPR014974 Domain of unknown function DUF1833 RD11_RS03710 IPR000064 Endopeptidase, NLPC/P60 domain RD11_RS03715 IPR015406 Domain of unknown function DUF1983 RD11_RS03715 IPR032876 RD11_RS03715 RD11_RS03730 IPR013425 Autotransporter-associated beta strand repeat RD11_RS03735 IPR032124 RD11_RS03735 RD11_RS03740 IPR023346 Lysozyme-like domain RD11_RS03740 IPR023347 Lysozyme domain RD11_RS03745 IPR019659 Protein of unknown function DUF2514 RD11_RS03760 IPR003738 Protein of unknown function DUF159 RD11_RS03765 IPR013727 Two-component sensor kinase N-terminal RD11_RS03770 IPR001789 Signal transduction response regulator, receiver domain RD11_RS03770 IPR001867 Signal transduction response regulator, C-terminal RD11_RS03770 IPR011006 CheY-like superfamily RD11_RS03770 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03775 IPR000086 NUDIX hydrolase domain RD11_RS03775 IPR015797 NUDIX hydrolase domain-like RD11_RS03775 IPR020084 NUDIX hydrolase, conserved site RD11_RS03775 IPR020476 NUDIX hydrolase RD11_RS03775 IPR022927 RNA pyrophosphohydrolase RppH RD11_RS03780 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD11_RS03780 IPR002316 Proline-tRNA ligase, class IIa RD11_RS03780 IPR004154 Anticodon-binding RD11_RS03780 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RD11_RS03780 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RD11_RS03780 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RD11_RS03785 IPR006683 Thioesterase superfamily RD11_RS03785 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family RD11_RS03785 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase RD11_RS03785 IPR029069 HotDog domain RD11_RS03790 IPR002898 MotA/TolQ/ExbB proton channel RD11_RS03790 IPR014163 Tol-Pal system, TolQ RD11_RS03795 IPR003400 Biopolymer transport protein ExbD/TolR RD11_RS03795 IPR014168 Biopolymer transport, TolR RD11_RS03800 IPR006260 TonB, C-terminal RD11_RS03800 IPR014161 Tol-Pal system, TolA RD11_RS03805 IPR007195 TolB, N-terminal RD11_RS03805 IPR011659 WD40-like Beta Propeller RD11_RS03805 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB RD11_RS03805 IPR015943 WD40/YVTN repeat-like-containing domain RD11_RS03810 IPR006664 Outer membrane protein, bacterial RD11_RS03810 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD11_RS03810 IPR006690 Outer membrane protein, OmpA-like, conserved site RD11_RS03810 IPR014169 Peptidoglycan-associated lipoprotein RD11_RS03815 IPR011990 Tetratricopeptide-like helical domain RD11_RS03815 IPR014162 Tol-Pal system, YbgF RD11_RS03815 IPR019734 Tetratricopeptide repeat RD11_RS03820 IPR000522 ABC transporter, permease protein RD11_RS03820 IPR029022 ABC transporter, BtuC-like RD11_RS03825 IPR003439 ABC transporter-like RD11_RS03825 IPR003593 AAA+ ATPase domain RD11_RS03825 IPR017871 ABC transporter, conserved site RD11_RS03825 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03830 IPR005064 Bordetella uptake gene RD11_RS03835 IPR005064 Bordetella uptake gene RD11_RS03840 IPR000101 Gamma-glutamyltranspeptidase RD11_RS03840 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS03845 IPR001584 Integrase, catalytic core RD11_RS03845 IPR009057 Homeodomain-like RD11_RS03845 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03845 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03845 IPR012337 Ribonuclease H-like domain RD11_RS03845 IPR024967 DNA-binding domain, IS481-type RD11_RS03850 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS03850 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS03850 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS03850 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS03850 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type RD11_RS03855 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB RD11_RS03855 IPR011642 Nucleoside recognition Gate RD11_RS03860 IPR001697 Pyruvate kinase RD11_RS03860 IPR011037 Pyruvate kinase-like, insert domain RD11_RS03860 IPR015793 Pyruvate kinase, barrel RD11_RS03860 IPR015794 Pyruvate kinase, alpha/beta RD11_RS03860 IPR015795 Pyruvate kinase, C-terminal RD11_RS03860 IPR015806 Pyruvate kinase, beta-barrel insert domain RD11_RS03860 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS03860 IPR018209 Pyruvate kinase, active site RD11_RS03865 IPR004381 Glycerate kinase RD11_RS03865 IPR018193 Glycerate kinase, flavodoxin-like domain RD11_RS03870 IPR001737 Ribosomal RNA adenine methylase transferase RD11_RS03870 IPR011530 Ribosomal RNA adenine dimethylase RD11_RS03870 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RD11_RS03870 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RD11_RS03870 IPR023165 rRNA adenine dimethylase-like RD11_RS03870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS03875 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD11_RS03875 IPR015391 SurA N-terminal RD11_RS03875 IPR023034 Peptidyl-prolyl isomerase SurA RD11_RS03875 IPR027304 Trigger factor/SurA domain RD11_RS03880 IPR007543 Organic solvent tolerance protein, C-terminal RD11_RS03880 IPR020889 Lipopolysaccharide assembly, LptD RD11_RS03885 IPR002575 Aminoglycoside phosphotransferase RD11_RS03885 IPR011009 Protein kinase-like domain RD11_RS03890 IPR005835 Nucleotidyl transferase RD11_RS03890 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS03900 IPR001533 Transcriptional coactivator/pterin dehydratase RD11_RS03905 IPR006664 Outer membrane protein, bacterial RD11_RS03905 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD11_RS03910 IPR001584 Integrase, catalytic core RD11_RS03910 IPR009057 Homeodomain-like RD11_RS03910 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03910 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03910 IPR012337 Ribonuclease H-like domain RD11_RS03910 IPR024967 DNA-binding domain, IS481-type RD11_RS03915 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS03920 IPR009409 Protein of unknown function DUF1059 RD11_RS03925 IPR005814 Aminotransferase class-III RD11_RS03925 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS03925 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS03925 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS03930 IPR000120 Amidase RD11_RS03930 IPR020556 Amidase, conserved site RD11_RS03930 IPR023631 Amidase signature domain RD11_RS03935 IPR003439 ABC transporter-like RD11_RS03935 IPR003593 AAA+ ATPase domain RD11_RS03935 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS03935 IPR017871 ABC transporter, conserved site RD11_RS03935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS03940 IPR000515 MetI-like domain RD11_RS03945 IPR000515 MetI-like domain RD11_RS03950 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS03950 IPR030678 RD11_RS03950 RD11_RS03955 IPR005471 Transcription regulator IclR, N-terminal RD11_RS03955 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03955 IPR014757 Transcription regulator IclR, C-terminal RD11_RS03955 IPR029016 GAF domain-like RD11_RS03960 IPR009057 Homeodomain-like RD11_RS03960 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS03965 IPR001584 Integrase, catalytic core RD11_RS03965 IPR009057 Homeodomain-like RD11_RS03965 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03965 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS03965 IPR012337 Ribonuclease H-like domain RD11_RS03965 IPR024967 DNA-binding domain, IS481-type RD11_RS03970 IPR005730 Carboxynorspermidine decarboxylase RD11_RS03970 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD11_RS03970 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RD11_RS03970 IPR029066 PLP-binding barrel RD11_RS03975 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase RD11_RS03975 IPR016040 NAD(P)-binding domain RD11_RS03975 IPR032095 RD11_RS03975 RD11_RS03980 IPR001584 Integrase, catalytic core RD11_RS03980 IPR009057 Homeodomain-like RD11_RS03980 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS03980 IPR012337 Ribonuclease H-like domain RD11_RS03980 IPR024967 DNA-binding domain, IS481-type RD11_RS03990 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RD11_RS03995 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS03995 IPR010105 TonB-dependent siderophore receptor RD11_RS03995 IPR011662 Secretin/TonB, short N-terminal RD11_RS03995 IPR012910 TonB-dependent receptor, plug RD11_RS04000 IPR006860 FecR protein RD11_RS04000 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD11_RS04000 IPR032623 RD11_RS04000 RD11_RS04005 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS04005 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04005 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD11_RS04005 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS04005 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS04005 IPR014284 RNA polymerase sigma-70 like domain RD11_RS04010 IPR001584 Integrase, catalytic core RD11_RS04010 IPR009057 Homeodomain-like RD11_RS04010 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04010 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04010 IPR012337 Ribonuclease H-like domain RD11_RS04010 IPR024967 DNA-binding domain, IS481-type RD11_RS04015 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD11_RS04015 IPR009537 Domain of unknown function DUF1156 RD11_RS04015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS04020 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04025 IPR001584 Integrase, catalytic core RD11_RS04025 IPR009057 Homeodomain-like RD11_RS04025 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04025 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04025 IPR012337 Ribonuclease H-like domain RD11_RS04025 IPR024967 DNA-binding domain, IS481-type RD11_RS04030 IPR001387 Cro/C1-type helix-turn-helix domain RD11_RS04030 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04035 IPR001867 Signal transduction response regulator, C-terminal RD11_RS04035 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04035 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS04040 IPR001048 Aspartate/glutamate/uridylate kinase RD11_RS04040 IPR001057 Glutamate/acetylglutamate kinase RD11_RS04040 IPR002478 PUA domain RD11_RS04040 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase RD11_RS04040 IPR011529 Glutamate 5-kinase RD11_RS04040 IPR015947 PUA-like domain RD11_RS04040 IPR019797 Glutamate 5-kinase, conserved site RD11_RS04045 IPR006073 GTP binding domain RD11_RS04045 IPR006074 GTP1/OBG, conserved site RD11_RS04045 IPR006169 GTP1/OBG domain RD11_RS04045 IPR014100 GTP-binding protein Obg/CgtA RD11_RS04045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS04050 IPR001684 Ribosomal protein L27 RD11_RS04050 IPR018261 Ribosomal protein L27, conserved site RD11_RS04055 IPR001787 Ribosomal protein L21 RD11_RS04055 IPR018258 Ribosomal protein L21, conserved site RD11_RS04055 IPR028909 Ribosomal protein L21-like RD11_RS04060 IPR011234 Fumarylacetoacetase, C-terminal-related RD11_RS04065 IPR000092 Polyprenyl synthetase RD11_RS04065 IPR008949 Terpenoid synthase RD11_RS04065 IPR017446 Polyprenyl synthetase-related RD11_RS04075 IPR000847 Transcription regulator HTH, LysR RD11_RS04075 IPR005119 LysR, substrate-binding RD11_RS04075 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04080 IPR002821 Hydantoinase/oxoprolinase RD11_RS04080 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD11_RS04085 IPR003692 Hydantoinase B/oxoprolinase RD11_RS04090 IPR006076 FAD dependent oxidoreductase RD11_RS04090 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS04095 IPR001584 Integrase, catalytic core RD11_RS04095 IPR009057 Homeodomain-like RD11_RS04095 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04095 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04095 IPR012337 Ribonuclease H-like domain RD11_RS04095 IPR024967 DNA-binding domain, IS481-type RD11_RS04100 IPR010102 Succinate semialdehyde dehydrogenase RD11_RS04100 IPR015590 Aldehyde dehydrogenase domain RD11_RS04100 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS04100 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS04100 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS04100 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS04100 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD11_RS04105 IPR003996 RTX toxin-activating protein C, bacteria RD11_RS04115 IPR001343 Haemolysin-type calcium-binding repeat RD11_RS04115 IPR003995 RTX toxin determinant A RD11_RS04115 IPR005165 Anthrax toxin, edema factor, central RD11_RS04115 IPR011049 Serralysin-like metalloprotease, C-terminal RD11_RS04115 IPR018504 RTX N-terminal RD11_RS04115 IPR018511 Hemolysin-type calcium-binding conserved site RD11_RS04120 IPR003439 ABC transporter-like RD11_RS04120 IPR003593 AAA+ ATPase domain RD11_RS04120 IPR005074 Peptidase C39, bacteriocin processing RD11_RS04120 IPR010132 ATPase, type I secretion system, HlyB RD11_RS04120 IPR011527 ABC transporter type 1, transmembrane domain RD11_RS04120 IPR017871 ABC transporter, conserved site RD11_RS04120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS04125 IPR003997 RTX secretion protein D, Gram-negative bacteria RD11_RS04125 IPR006144 Secretion protein HlyD, conserved site RD11_RS04125 IPR010129 Type I secretion membrane fusion protein, HlyD RD11_RS04130 IPR003423 Outer membrane efflux protein RD11_RS04130 IPR028351 Cyclolysin transport protein CyaE RD11_RS04135 IPR000847 Transcription regulator HTH, LysR RD11_RS04135 IPR005119 LysR, substrate-binding RD11_RS04135 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04140 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS04150 IPR000515 MetI-like domain RD11_RS04150 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS04150 IPR030205 RD11_RS04150 RD11_RS04155 IPR003439 ABC transporter-like RD11_RS04155 IPR003593 AAA+ ATPase domain RD11_RS04155 IPR017871 ABC transporter, conserved site RD11_RS04155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS04155 IPR030206 RD11_RS04155 RD11_RS04155 IPR030679 RD11_RS04155 RD11_RS04160 IPR001544 Aminotransferase, class IV RD11_RS04170 IPR005064 Bordetella uptake gene RD11_RS04175 IPR002347 Glucose/ribitol dehydrogenase RD11_RS04175 IPR016040 NAD(P)-binding domain RD11_RS04180 IPR000399 TPP-binding enzyme, conserved site RD11_RS04180 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS04180 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS04180 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS04180 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS04180 IPR029061 Thiamin diphosphate-binding fold RD11_RS04185 IPR000524 Transcription regulator HTH, GntR RD11_RS04185 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS04185 IPR011711 GntR, C-terminal RD11_RS04185 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04190 IPR005546 Autotransporter beta-domain RD11_RS04190 IPR006315 Outer membrane autotransporter barrel RD11_RS04195 IPR000524 Transcription regulator HTH, GntR RD11_RS04195 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS04195 IPR011711 GntR, C-terminal RD11_RS04195 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04200 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS04200 IPR011032 GroES (chaperonin 10)-like RD11_RS04200 IPR013149 Alcohol dehydrogenase, C-terminal RD11_RS04200 IPR013154 Alcohol dehydrogenase GroES-like RD11_RS04200 IPR016040 NAD(P)-binding domain RD11_RS04200 IPR020843 Polyketide synthase, enoylreductase RD11_RS04205 IPR000873 AMP-dependent synthetase/ligase RD11_RS04205 IPR020845 AMP-binding, conserved site RD11_RS04205 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS04210 IPR021259 Protein of unknown function DUF2817 RD11_RS04215 IPR000515 MetI-like domain RD11_RS04220 IPR003439 ABC transporter-like RD11_RS04220 IPR003593 AAA+ ATPase domain RD11_RS04220 IPR017871 ABC transporter, conserved site RD11_RS04220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS04225 IPR015168 SsuA/THI5-like RD11_RS04225 IPR027939 NMT1/THI5 family RD11_RS04230 IPR025870 Glyoxalase-like domain RD11_RS04230 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS04235 IPR000399 TPP-binding enzyme, conserved site RD11_RS04235 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS04235 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS04235 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS04235 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS04235 IPR029061 Thiamin diphosphate-binding fold RD11_RS04240 IPR006685 Mechanosensitive ion channel MscS RD11_RS04240 IPR010920 Like-Sm (LSM) domain RD11_RS04240 IPR011066 Mechanosensitive ion channel MscS, C-terminal RD11_RS04245 IPR001584 Integrase, catalytic core RD11_RS04245 IPR009057 Homeodomain-like RD11_RS04245 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04245 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04245 IPR012337 Ribonuclease H-like domain RD11_RS04245 IPR024967 DNA-binding domain, IS481-type RD11_RS04250 IPR025411 Domain of unknown function DUF4136 RD11_RS04255 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RD11_RS04255 IPR012779 Peptidase M1, alanyl aminopeptidase RD11_RS04255 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal RD11_RS04255 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RD11_RS04260 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase RD11_RS04260 IPR028343 Fructose-1,6-bisphosphatase RD11_RS04260 IPR033391 RD11_RS04260 RD11_RS04265 IPR001584 Integrase, catalytic core RD11_RS04265 IPR009057 Homeodomain-like RD11_RS04265 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04265 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04265 IPR012337 Ribonuclease H-like domain RD11_RS04265 IPR024967 DNA-binding domain, IS481-type RD11_RS04270 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RD11_RS04270 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RD11_RS04275 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD11_RS04275 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RD11_RS04275 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS04280 IPR001650 Helicase, C-terminal RD11_RS04280 IPR003711 CarD-like/TRCF domain RD11_RS04280 IPR004576 Transcription-repair coupling factor RD11_RS04280 IPR005118 Transcription-repair-coupling factor, C-terminal domain RD11_RS04280 IPR011545 DEAD/DEAH box helicase domain RD11_RS04280 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS04280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS04285 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like RD11_RS04285 IPR023190 Phosphoserine phosphatase, domain 2 RD11_RS04285 IPR023214 HAD-like domain RD11_RS04285 IPR025138 Domain of unknown function DUF4072 RD11_RS04290 IPR000847 Transcription regulator HTH, LysR RD11_RS04290 IPR005119 LysR, substrate-binding RD11_RS04290 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04295 IPR005064 Bordetella uptake gene RD11_RS04300 IPR000399 TPP-binding enzyme, conserved site RD11_RS04300 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS04300 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS04300 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS04300 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS04300 IPR029061 Thiamin diphosphate-binding fold RD11_RS04305 IPR002347 Glucose/ribitol dehydrogenase RD11_RS04305 IPR016040 NAD(P)-binding domain RD11_RS04305 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS04310 IPR000182 GNAT domain RD11_RS04310 IPR016181 Acyl-CoA N-acyltransferase RD11_RS04315 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS04315 IPR010105 TonB-dependent siderophore receptor RD11_RS04315 IPR012910 TonB-dependent receptor, plug RD11_RS04315 IPR030148 RD11_RS04315 RD11_RS04320 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS04320 IPR010105 TonB-dependent siderophore receptor RD11_RS04320 IPR012910 TonB-dependent receptor, plug RD11_RS04320 IPR030148 RD11_RS04320 RD11_RS04325 IPR016768 Uncharacterised conserved protein UCP019883, membrane RD11_RS04330 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD11_RS04330 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RD11_RS04335 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD11_RS04335 IPR003918 NADH:ubiquinone oxidoreductase RD11_RS04335 IPR010227 NADH-quinone oxidoreductase, chain M/4 RD11_RS04340 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RD11_RS04340 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD11_RS04340 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RD11_RS04340 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RD11_RS04345 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RD11_RS04350 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RD11_RS04355 IPR010226 NADH-quinone oxidoreductase, chain I RD11_RS04355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD11_RS04355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS04360 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RD11_RS04360 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RD11_RS04365 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RD11_RS04365 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS04365 IPR006656 Molybdopterin oxidoreductase RD11_RS04365 IPR006657 Molydopterin dinucleotide-binding domain RD11_RS04365 IPR009010 Aspartate decarboxylase-like domain RD11_RS04365 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RD11_RS04365 IPR012675 Beta-grasp domain RD11_RS04365 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RD11_RS04370 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RD11_RS04370 IPR011537 NADH ubiquinone oxidoreductase, F subunit RD11_RS04370 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit RD11_RS04370 IPR019554 Soluble ligand binding domain RD11_RS04370 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding RD11_RS04375 IPR002023 NADH-quinone oxidoreductase subunit E-like RD11_RS04375 IPR012336 Thioredoxin-like fold RD11_RS04380 IPR001135 NADH-quinone oxidoreductase, subunit D RD11_RS04380 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RD11_RS04380 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RD11_RS04380 IPR029014 NiFe hydrogenase-like RD11_RS04385 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RD11_RS04385 IPR010218 NADH dehydrogenase, subunit C RD11_RS04385 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site RD11_RS04390 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RD11_RS04390 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RD11_RS04395 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RD11_RS04395 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RD11_RS04400 IPR001702 Porin, Gram-negative type RD11_RS04400 IPR002299 Porin, Neisseria sp. type RD11_RS04400 IPR023614 Porin domain RD11_RS04410 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS04410 IPR009057 Homeodomain-like RD11_RS04410 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS04415 IPR003736 Phenylacetic acid degradation-related domain RD11_RS04415 IPR006683 Thioesterase superfamily RD11_RS04415 IPR029069 HotDog domain RD11_RS04420 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD11_RS04420 IPR016040 NAD(P)-binding domain RD11_RS04425 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RD11_RS04430 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD11_RS04430 IPR029052 Metallo-dependent phosphatase-like RD11_RS04435 IPR001206 Diacylglycerol kinase, catalytic domain RD11_RS04435 IPR016064 ATP-NAD kinase-like domain RD11_RS04440 IPR000847 Transcription regulator HTH, LysR RD11_RS04440 IPR005119 LysR, substrate-binding RD11_RS04440 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04445 IPR000060 BCCT transporter family RD11_RS04445 IPR018093 BCCT transporter, conserved site RD11_RS04450 IPR001584 Integrase, catalytic core RD11_RS04450 IPR009057 Homeodomain-like RD11_RS04450 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04450 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04450 IPR012337 Ribonuclease H-like domain RD11_RS04450 IPR024967 DNA-binding domain, IS481-type RD11_RS04455 IPR002577 Helix-turn-helix, HxlR type RD11_RS04455 IPR003033 SCP2 sterol-binding domain RD11_RS04455 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04455 IPR029229 Alkyl sulfatase, C-terminal RD11_RS04460 IPR006143 RND efflux pump, membrane fusion protein RD11_RS04460 IPR032317 RD11_RS04460 RD11_RS04465 IPR001036 Acriflavin resistance protein RD11_RS04465 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD11_RS04470 IPR003423 Outer membrane efflux protein RD11_RS04470 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD11_RS04475 IPR005149 Transcription regulator PadR N-terminal RD11_RS04475 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04480 IPR000923 Blue (type 1) copper domain RD11_RS04480 IPR008972 Cupredoxin RD11_RS04480 IPR014068 Azurin, proteobacteria RD11_RS04480 IPR028871 Blue (type 1) copper protein, binding site RD11_RS04485 IPR005471 Transcription regulator IclR, N-terminal RD11_RS04485 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04485 IPR029016 GAF domain-like RD11_RS04490 IPR002821 Hydantoinase/oxoprolinase RD11_RS04490 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD11_RS04495 IPR003692 Hydantoinase B/oxoprolinase RD11_RS04500 IPR006076 FAD dependent oxidoreductase RD11_RS04500 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS04505 IPR005064 Bordetella uptake gene RD11_RS04510 IPR001763 Rhodanese-like domain RD11_RS04510 IPR011051 RmlC-like cupin domain RD11_RS04510 IPR014710 RmlC-like jelly roll fold RD11_RS04515 IPR005064 Bordetella uptake gene RD11_RS04520 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD11_RS04525 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RD11_RS04525 IPR006233 Cystathionine beta-lyase, bacterial RD11_RS04525 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS04525 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS04525 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS04530 IPR000847 Transcription regulator HTH, LysR RD11_RS04530 IPR005119 LysR, substrate-binding RD11_RS04530 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04535 IPR002347 Glucose/ribitol dehydrogenase RD11_RS04535 IPR016040 NAD(P)-binding domain RD11_RS04540 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS04540 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS04545 IPR005064 Bordetella uptake gene RD11_RS04550 IPR000362 Fumarate lyase family RD11_RS04550 IPR008948 L-Aspartase-like RD11_RS04550 IPR009049 Argininosuccinate lyase RD11_RS04550 IPR022761 Fumarate lyase, N-terminal RD11_RS04550 IPR029419 Argininosuccinate lyase, C-terminal RD11_RS04555 IPR008948 L-Aspartase-like RD11_RS04560 IPR005656 MmgE/PrpD RD11_RS04565 IPR005064 Bordetella uptake gene RD11_RS04570 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD11_RS04570 IPR006395 Methylaspartate ammonia-lyase RD11_RS04570 IPR022662 Methylaspartate ammonia-lyase, C-terminal RD11_RS04570 IPR022665 Methylaspartate ammonia-lyase, N-terminal RD11_RS04570 IPR029017 Enolase N-terminal domain-like RD11_RS04570 IPR029065 Enolase C-terminal domain-like RD11_RS04575 IPR005471 Transcription regulator IclR, N-terminal RD11_RS04575 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04575 IPR014757 Transcription regulator IclR, C-terminal RD11_RS04575 IPR029016 GAF domain-like RD11_RS04580 IPR000060 BCCT transporter family RD11_RS04590 IPR004692 Preprotein translocase SecG subunit RD11_RS04595 IPR000652 Triosephosphate isomerase RD11_RS04595 IPR013785 Aldolase-type TIM barrel RD11_RS04595 IPR020861 Triosephosphate isomerase, active site RD11_RS04595 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RD11_RS04600 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS04600 IPR011032 GroES (chaperonin 10)-like RD11_RS04600 IPR013149 Alcohol dehydrogenase, C-terminal RD11_RS04600 IPR013154 Alcohol dehydrogenase GroES-like RD11_RS04600 IPR014189 Quinone oxidoreductase PIG3 RD11_RS04600 IPR016040 NAD(P)-binding domain RD11_RS04600 IPR020843 Polyketide synthase, enoylreductase RD11_RS04610 IPR002716 PIN domain RD11_RS04615 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD11_RS04615 IPR005789 Threonine dehydratase, catabolic RD11_RS04620 IPR001584 Integrase, catalytic core RD11_RS04620 IPR009057 Homeodomain-like RD11_RS04620 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04620 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04620 IPR012337 Ribonuclease H-like domain RD11_RS04620 IPR024967 DNA-binding domain, IS481-type RD11_RS04630 IPR001247 Exoribonuclease, phosphorolytic domain 1 RD11_RS04630 IPR003029 Ribosomal protein S1, RNA-binding domain RD11_RS04630 IPR004087 K Homology domain RD11_RS04630 IPR004088 K Homology domain, type 1 RD11_RS04630 IPR012162 Polyribonucleotide nucleotidyltransferase RD11_RS04630 IPR012340 Nucleic acid-binding, OB-fold RD11_RS04630 IPR015847 Exoribonuclease, phosphorolytic domain 2 RD11_RS04630 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RD11_RS04630 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS04630 IPR022967 RNA-binding domain, S1 RD11_RS04630 IPR027408 PNPase/RNase PH domain RD11_RS04635 IPR000589 Ribosomal protein S15 RD11_RS04635 IPR005290 Ribosomal protein S15, bacterial-type RD11_RS04635 IPR009068 S15/NS1, RNA-binding RD11_RS04645 IPR000462 CDP-alcohol phosphatidyltransferase RD11_RS04645 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase RD11_RS04650 IPR000506 Acetohydroxy acid isomeroreductase C-terminal RD11_RS04650 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS04650 IPR013023 Acetohydroxy acid isomeroreductase RD11_RS04650 IPR013116 Acetohydroxy acid isomeroreductase, catalytic RD11_RS04650 IPR013328 Dehydrogenase, multihelical RD11_RS04650 IPR016040 NAD(P)-binding domain RD11_RS04650 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS04655 IPR004789 Acetolactate synthase, small subunit RD11_RS04655 IPR019455 Acetolactate synthase, small subunit, C-terminal RD11_RS04660 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS04660 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS04660 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS04660 IPR012846 Acetolactate synthase, large subunit, biosynthetic RD11_RS04660 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS04660 IPR029061 Thiamin diphosphate-binding fold RD11_RS04665 IPR032692 RD11_RS04665 RD11_RS04670 IPR001584 Integrase, catalytic core RD11_RS04670 IPR009057 Homeodomain-like RD11_RS04670 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04670 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04670 IPR012337 Ribonuclease H-like domain RD11_RS04670 IPR024967 DNA-binding domain, IS481-type RD11_RS04675 IPR003439 ABC transporter-like RD11_RS04675 IPR003593 AAA+ ATPase domain RD11_RS04675 IPR011527 ABC transporter type 1, transmembrane domain RD11_RS04675 IPR017871 ABC transporter, conserved site RD11_RS04675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS04680 IPR008854 TPMT family RD11_RS04680 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification RD11_RS04680 IPR025835 Thiopurine S-methyltransferase RD11_RS04680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS04690 IPR021747 Protein of unknown function DUF3313 RD11_RS04695 IPR009875 PilZ domain RD11_RS04695 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal RD11_RS04695 IPR012349 FMN-binding split barrel RD11_RS04695 IPR023787 Type III secretion system flagellar brake protein YcgR RD11_RS04700 IPR003187 Phospholipase A1 RD11_RS04715 IPR006674 HD domain RD11_RS04715 IPR029016 GAF domain-like RD11_RS04720 IPR005656 MmgE/PrpD RD11_RS04725 IPR000089 Biotin/lipoyl attachment RD11_RS04725 IPR001249 Acetyl-CoA biotin carboxyl carrier RD11_RS04725 IPR001882 Biotin-binding site RD11_RS04725 IPR011053 Single hybrid motif RD11_RS04730 IPR000891 Pyruvate carboxyltransferase RD11_RS04730 IPR003379 Carboxylase, conserved domain RD11_RS04730 IPR013785 Aldolase-type TIM barrel RD11_RS04735 IPR011008 Dimeric alpha-beta barrel RD11_RS04740 IPR006680 Amidohydrolase 1 RD11_RS04740 IPR032466 RD11_RS04740 RD11_RS04745 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD11_RS04745 IPR016040 NAD(P)-binding domain RD11_RS04750 IPR000524 Transcription regulator HTH, GntR RD11_RS04750 IPR011663 UbiC transcription regulator-associated RD11_RS04750 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04750 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS04755 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RD11_RS04755 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD11_RS04755 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD11_RS04755 IPR005482 Biotin carboxylase, C-terminal RD11_RS04755 IPR011054 Rudiment single hybrid motif RD11_RS04755 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS04755 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS04755 IPR016185 Pre-ATP-grasp domain RD11_RS04760 IPR000022 Carboxyl transferase RD11_RS04760 IPR029045 ClpP/crotonase-like domain RD11_RS04765 IPR001584 Integrase, catalytic core RD11_RS04765 IPR009057 Homeodomain-like RD11_RS04765 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04765 IPR012337 Ribonuclease H-like domain RD11_RS04765 IPR024967 DNA-binding domain, IS481-type RD11_RS04780 IPR008928 Six-hairpin glycosidase-like RD11_RS04780 IPR012341 Six-hairpin glycosidase RD11_RS04795 IPR001584 Integrase, catalytic core RD11_RS04795 IPR009057 Homeodomain-like RD11_RS04795 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04795 IPR012337 Ribonuclease H-like domain RD11_RS04795 IPR024967 DNA-binding domain, IS481-type RD11_RS04800 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS04805 IPR003439 ABC transporter-like RD11_RS04805 IPR003593 AAA+ ATPase domain RD11_RS04805 IPR011527 ABC transporter type 1, transmembrane domain RD11_RS04805 IPR017871 ABC transporter, conserved site RD11_RS04805 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS04810 IPR001395 Aldo/keto reductase RD11_RS04810 IPR018170 Aldo/keto reductase, conserved site RD11_RS04810 IPR020471 Aldo/keto reductase subgroup RD11_RS04810 IPR023210 NADP-dependent oxidoreductase domain RD11_RS04815 IPR001395 Aldo/keto reductase RD11_RS04815 IPR020471 Aldo/keto reductase subgroup RD11_RS04815 IPR023210 NADP-dependent oxidoreductase domain RD11_RS04825 IPR005625 PepSY-associated TM helix RD11_RS04830 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD11_RS04830 IPR029052 Metallo-dependent phosphatase-like RD11_RS04835 IPR001264 Glycosyl transferase, family 51 RD11_RS04835 IPR001460 Penicillin-binding protein, transpeptidase RD11_RS04835 IPR012338 Beta-lactamase/transpeptidase-like RD11_RS04835 IPR012340 Nucleic acid-binding, OB-fold RD11_RS04835 IPR023346 Lysozyme-like domain RD11_RS04835 IPR031376 RD11_RS04835 RD11_RS04840 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RD11_RS04840 IPR015943 WD40/YVTN repeat-like-containing domain RD11_RS04840 IPR029058 Alpha/Beta hydrolase fold RD11_RS04845 IPR003736 Phenylacetic acid degradation-related domain RD11_RS04845 IPR006683 Thioesterase superfamily RD11_RS04845 IPR029069 HotDog domain RD11_RS04850 IPR001126 DNA-repair protein, UmuC-like RD11_RS04850 IPR017961 DNA polymerase, Y-family, little finger domain RD11_RS04850 IPR022880 DNA polymerase IV RD11_RS04850 IPR024728 DNA polymerase type-Y, HhH motif RD11_RS04855 IPR001584 Integrase, catalytic core RD11_RS04855 IPR009057 Homeodomain-like RD11_RS04855 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04855 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04855 IPR012337 Ribonuclease H-like domain RD11_RS04855 IPR024967 DNA-binding domain, IS481-type RD11_RS04860 IPR005064 Bordetella uptake gene RD11_RS04865 IPR000847 Transcription regulator HTH, LysR RD11_RS04865 IPR005119 LysR, substrate-binding RD11_RS04865 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04870 IPR031807 RD11_RS04870 RD11_RS04875 IPR001584 Integrase, catalytic core RD11_RS04875 IPR009057 Homeodomain-like RD11_RS04875 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04875 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04875 IPR012337 Ribonuclease H-like domain RD11_RS04875 IPR024967 DNA-binding domain, IS481-type RD11_RS04880 IPR012933 HicA mRNA interferase family RD11_RS04890 IPR011701 Major facilitator superfamily RD11_RS04890 IPR020846 Major facilitator superfamily domain RD11_RS04895 IPR006346 2-phosphoglycolate phosphatase, prokaryotic RD11_RS04895 IPR006439 HAD hydrolase, subfamily IA RD11_RS04895 IPR023198 Phosphoglycolate phosphatase, domain 2 RD11_RS04895 IPR023214 HAD-like domain RD11_RS04900 IPR010233 Ubiquinone biosynthesis O-methyltransferase RD11_RS04900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS04905 IPR006664 Outer membrane protein, bacterial RD11_RS04905 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD11_RS04905 IPR006690 Outer membrane protein, OmpA-like, conserved site RD11_RS04910 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RD11_RS04910 IPR005743 DNA gyrase, subunit A RD11_RS04910 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RD11_RS04910 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain RD11_RS04910 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RD11_RS04910 IPR013760 DNA topoisomerase, type IIA-like domain RD11_RS04910 IPR024946 Arginine repressor C-terminal-like domain RD11_RS04915 IPR000192 Aminotransferase class V domain RD11_RS04915 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS04915 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS04915 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS04915 IPR022278 Phosphoserine aminotransferase RD11_RS04920 IPR001086 Prephenate dehydratase RD11_RS04920 IPR002701 Chorismate mutase RD11_RS04920 IPR002912 ACT domain RD11_RS04920 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RD11_RS04920 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain RD11_RS04920 IPR018528 Prephenate dehydratase, conserved site RD11_RS04920 IPR020822 Chorismate mutase, type II RD11_RS04925 IPR003099 Prephenate dehydrogenase RD11_RS04925 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS04925 IPR016040 NAD(P)-binding domain RD11_RS04930 IPR001986 Enolpyruvate transferase domain RD11_RS04930 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RD11_RS04930 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RD11_RS04930 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RD11_RS04935 IPR003136 Cytidylate kinase RD11_RS04935 IPR011994 Cytidylate kinase domain RD11_RS04935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS04940 IPR000110 Ribosomal protein S1 RD11_RS04940 IPR003029 Ribosomal protein S1, RNA-binding domain RD11_RS04940 IPR012340 Nucleic acid-binding, OB-fold RD11_RS04940 IPR022967 RNA-binding domain, S1 RD11_RS04945 IPR000119 Histone-like bacterial DNA-binding protein RD11_RS04945 IPR005685 Integration host factor, beta subunit RD11_RS04945 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD11_RS04950 IPR010445 Protein of unknown function DUF1049 RD11_RS04955 IPR011990 Tetratricopeptide-like helical domain RD11_RS04955 IPR030865 RD11_RS04955 RD11_RS04960 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RD11_RS04960 IPR011611 Carbohydrate kinase PfkB RD11_RS04960 IPR011913 RfaE bifunctional protein, domain I RD11_RS04960 IPR029056 Ribokinase-like RD11_RS04965 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD11_RS04965 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase RD11_RS04965 IPR016040 NAD(P)-binding domain RD11_RS04970 IPR010994 RuvA domain 2-like RD11_RS04975 IPR001584 Integrase, catalytic core RD11_RS04975 IPR009057 Homeodomain-like RD11_RS04975 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS04975 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS04975 IPR012337 Ribonuclease H-like domain RD11_RS04975 IPR024967 DNA-binding domain, IS481-type RD11_RS04980 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RD11_RS04980 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD11_RS04980 IPR005856 Cysteine synthase K/M RD11_RS04980 IPR005858 Cysteine synthase B RD11_RS04985 IPR011757 Lytic transglycosylase MltB RD11_RS04985 IPR023346 Lysozyme-like domain RD11_RS04985 IPR031304 RD11_RS04985 RD11_RS04990 IPR000286 Histone deacetylase superfamily RD11_RS04990 IPR023801 Histone deacetylase domain RD11_RS04995 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site RD11_RS04995 IPR012255 Electron transfer flavoprotein, beta subunit RD11_RS04995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS04995 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RD11_RS05000 IPR001308 Electron transfer flavoprotein, alpha subunit RD11_RS05000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS05000 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RD11_RS05000 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RD11_RS05000 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site RD11_RS05000 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS05005 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS05005 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS05005 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS05005 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS05005 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RD11_RS05005 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RD11_RS05010 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD11_RS05010 IPR012336 Thioredoxin-like fold RD11_RS05010 IPR019479 Peroxiredoxin, C-terminal RD11_RS05010 IPR024706 Peroxiredoxin, AhpC-type RD11_RS05015 IPR000957 Sulphate/thiosulphate-binding, conserved site RD11_RS05015 IPR005669 Thiosulphate/Sulfate-binding protein RD11_RS05025 IPR000515 MetI-like domain RD11_RS05025 IPR005667 Sulphate ABC transporter permease protein 2 RD11_RS05025 IPR011865 Sulphate ABC transporter, permease protein CysT RD11_RS05030 IPR000515 MetI-like domain RD11_RS05030 IPR005667 Sulphate ABC transporter permease protein 2 RD11_RS05030 IPR011866 Sulphate ABC transporter, permease protein CysW RD11_RS05035 IPR003439 ABC transporter-like RD11_RS05035 IPR003593 AAA+ ATPase domain RD11_RS05035 IPR005666 Sulphate transport system permease protein 1 RD11_RS05035 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS05035 IPR017871 ABC transporter, conserved site RD11_RS05035 IPR024765 TOBE-like domain RD11_RS05035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05040 IPR002500 Phosphoadenosine phosphosulphate reductase RD11_RS05040 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase RD11_RS05040 IPR011798 Adenosine 5'-phosphosulphate reductase RD11_RS05040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS05045 IPR002500 Phosphoadenosine phosphosulphate reductase RD11_RS05045 IPR011784 Sulphate adenylyltransferase, small subunit RD11_RS05045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS05055 IPR006638 Elongator protein 3/MiaB/NifB RD11_RS05055 IPR007197 Radical SAM RD11_RS05055 IPR013785 Aldolase-type TIM barrel RD11_RS05065 IPR000620 Drug/metabolite transporter RD11_RS05070 IPR001857 Ribosomal protein L19 RD11_RS05070 IPR008991 Translation protein SH3-like domain RD11_RS05070 IPR018257 Ribosomal protein L19, conserved site RD11_RS05075 IPR000086 NUDIX hydrolase domain RD11_RS05075 IPR015797 NUDIX hydrolase domain-like RD11_RS05080 IPR001584 Integrase, catalytic core RD11_RS05080 IPR009057 Homeodomain-like RD11_RS05080 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05080 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05080 IPR012337 Ribonuclease H-like domain RD11_RS05080 IPR024967 DNA-binding domain, IS481-type RD11_RS05085 IPR001395 Aldo/keto reductase RD11_RS05085 IPR020471 Aldo/keto reductase subgroup RD11_RS05085 IPR023210 NADP-dependent oxidoreductase domain RD11_RS05090 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS05090 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS05095 IPR011701 Major facilitator superfamily RD11_RS05095 IPR020846 Major facilitator superfamily domain RD11_RS05100 IPR007440 Chorismate--pyruvate lyase RD11_RS05100 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS05105 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RD11_RS05105 IPR002942 RNA-binding S4 domain RD11_RS05105 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD11_RS05105 IPR020103 Pseudouridine synthase, catalytic domain RD11_RS05110 IPR000847 Transcription regulator HTH, LysR RD11_RS05110 IPR005119 LysR, substrate-binding RD11_RS05110 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05120 IPR001036 Acriflavin resistance protein RD11_RS05120 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RD11_RS05120 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD11_RS05125 IPR003423 Outer membrane efflux protein RD11_RS05125 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD11_RS05130 IPR007341 Transglycosylase-associated protein RD11_RS05135 IPR003782 Copper chaperone SCO1/SenC RD11_RS05135 IPR012336 Thioredoxin-like fold RD11_RS05140 IPR001567 Peptidase M3A/M3B RD11_RS05140 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RD11_RS05140 IPR024079 Metallopeptidase, catalytic domain RD11_RS05140 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RD11_RS05145 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RD11_RS05145 IPR016040 NAD(P)-binding domain RD11_RS05145 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD11_RS05145 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD11_RS05145 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RD11_RS05150 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS05150 IPR001789 Signal transduction response regulator, receiver domain RD11_RS05150 IPR011006 CheY-like superfamily RD11_RS05150 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05150 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS05155 IPR000014 PAS domain RD11_RS05155 IPR001610 PAC motif RD11_RS05155 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS05155 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS05155 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS05155 IPR013656 PAS fold-4 RD11_RS05160 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type RD11_RS05160 IPR005474 Transketolase, N-terminal RD11_RS05160 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD11_RS05160 IPR029061 Thiamin diphosphate-binding fold RD11_RS05160 IPR033247 RD11_RS05160 RD11_RS05165 IPR000089 Biotin/lipoyl attachment RD11_RS05165 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD11_RS05165 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD11_RS05165 IPR004167 E3 binding RD11_RS05165 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex RD11_RS05165 IPR011053 Single hybrid motif RD11_RS05165 IPR023213 Chloramphenicol acetyltransferase-like domain RD11_RS05170 IPR000089 Biotin/lipoyl attachment RD11_RS05170 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD11_RS05170 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD11_RS05170 IPR006258 Dihydrolipoamide dehydrogenase RD11_RS05170 IPR011053 Single hybrid motif RD11_RS05170 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD11_RS05170 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD11_RS05170 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS05175 IPR001029 Flagellin, D0/D1 domain RD11_RS05175 IPR001492 Flagellin RD11_RS05180 IPR001584 Integrase, catalytic core RD11_RS05180 IPR009057 Homeodomain-like RD11_RS05180 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05180 IPR012337 Ribonuclease H-like domain RD11_RS05180 IPR024967 DNA-binding domain, IS481-type RD11_RS05185 IPR006700 Ribosomal RNA small subunit methyltransferase E RD11_RS05185 IPR015947 PUA-like domain RD11_RS05185 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD11_RS05185 IPR029028 Alpha/beta knot methyltransferases RD11_RS05190 IPR005474 Transketolase, N-terminal RD11_RS05190 IPR005475 Transketolase-like, pyrimidine-binding domain RD11_RS05190 IPR005478 Transketolase, bacterial-like RD11_RS05190 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD11_RS05190 IPR029061 Thiamin diphosphate-binding fold RD11_RS05190 IPR033247 RD11_RS05190 RD11_RS05190 IPR033248 RD11_RS05190 RD11_RS05195 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RD11_RS05195 IPR016040 NAD(P)-binding domain RD11_RS05195 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RD11_RS05195 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RD11_RS05195 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RD11_RS05195 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RD11_RS05200 IPR001576 Phosphoglycerate kinase RD11_RS05200 IPR015824 Phosphoglycerate kinase, N-terminal RD11_RS05200 IPR015901 Phosphoglycerate kinase, C-terminal RD11_RS05200 IPR015911 Phosphoglycerate kinase, conserved site RD11_RS05205 IPR002347 Glucose/ribitol dehydrogenase RD11_RS05205 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RD11_RS05205 IPR016040 NAD(P)-binding domain RD11_RS05210 IPR000890 Aliphatic acid kinase, short-chain RD11_RS05210 IPR004372 Acetate/Proprionate kinase RD11_RS05210 IPR023865 Aliphatic acid kinase, short-chain, conserved site RD11_RS05215 IPR002505 Phosphate acetyl/butaryl transferase RD11_RS05215 IPR012147 Phosphate acetyl/butyryltransferase RD11_RS05220 IPR024501 Protein of unknown function DUF3141 RD11_RS05220 IPR029058 Alpha/Beta hydrolase fold RD11_RS05225 IPR004045 Glutathione S-transferase, N-terminal RD11_RS05225 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS05225 IPR012336 Thioredoxin-like fold RD11_RS05230 IPR001584 Integrase, catalytic core RD11_RS05230 IPR009057 Homeodomain-like RD11_RS05230 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05230 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05230 IPR012337 Ribonuclease H-like domain RD11_RS05230 IPR024967 DNA-binding domain, IS481-type RD11_RS05235 IPR007837 DNA damage-inducible protein DinB RD11_RS05235 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RD11_RS05240 IPR000182 GNAT domain RD11_RS05240 IPR016181 Acyl-CoA N-acyltransferase RD11_RS05245 IPR001623 DnaJ domain RD11_RS05245 IPR002939 Chaperone DnaJ, C-terminal RD11_RS05245 IPR008971 HSP40/DnaJ peptide-binding RD11_RS05255 IPR008407 Branched-chain amino acid transport, AzlD RD11_RS05255 IPR011606 Branched-chain amino acid transport, permease RD11_RS05265 IPR001453 Molybdopterin binding domain RD11_RS05265 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD11_RS05275 IPR011055 Duplicated hybrid motif RD11_RS05275 IPR016047 Peptidase M23 RD11_RS05285 IPR004368 Translation initiation factor IF-1 RD11_RS05285 IPR006196 RNA-binding domain, S1, IF1 type RD11_RS05285 IPR012340 Nucleic acid-binding, OB-fold RD11_RS05285 IPR022967 RNA-binding domain, S1 RD11_RS05290 IPR001584 Integrase, catalytic core RD11_RS05290 IPR009057 Homeodomain-like RD11_RS05290 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05290 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05290 IPR012337 Ribonuclease H-like domain RD11_RS05290 IPR024967 DNA-binding domain, IS481-type RD11_RS05295 IPR000943 RNA polymerase sigma-70 RD11_RS05295 IPR007624 RNA polymerase sigma-70 region 3 RD11_RS05295 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS05295 IPR007630 RNA polymerase sigma-70 region 4 RD11_RS05295 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05295 IPR012845 RNA polymerase sigma factor, FliA/WhiG RD11_RS05295 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS05295 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS05295 IPR014284 RNA polymerase sigma-70 like domain RD11_RS05295 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RD11_RS05295 IPR028617 RNA polymerase sigma factor FliA RD11_RS05300 IPR023559 Flagellar transcriptional activator FlhD RD11_RS05305 IPR007944 Flagellar transcriptional activator FlhC RD11_RS05310 IPR000540 Flagellar motor protein MotA, conserved site RD11_RS05310 IPR002898 MotA/TolQ/ExbB proton channel RD11_RS05310 IPR022522 Flagellar motor stator, MotA RD11_RS05315 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD11_RS05315 IPR025713 Motility protein B, N-terminal domain RD11_RS05320 IPR001789 Signal transduction response regulator, receiver domain RD11_RS05320 IPR011006 CheY-like superfamily RD11_RS05325 IPR002545 CheW-like protein RD11_RS05325 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS05325 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS05325 IPR004105 Histidine kinase CheA-like, homodimeric domain RD11_RS05325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS05325 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RD11_RS05325 IPR015162 CheY binding RD11_RS05330 IPR002545 CheW-like protein RD11_RS05335 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD11_RS05335 IPR003660 HAMP linker domain RD11_RS05335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD11_RS05335 IPR004090 Chemotaxis methyl-accepting receptor RD11_RS05345 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RD11_RS05345 IPR001789 Signal transduction response regulator, receiver domain RD11_RS05345 IPR008248 Signal transduction response regulator, chemotaxis, CheB RD11_RS05345 IPR011006 CheY-like superfamily RD11_RS05350 IPR001789 Signal transduction response regulator, receiver domain RD11_RS05350 IPR011006 CheY-like superfamily RD11_RS05355 IPR007439 Chemotaxis phosphatase, CheZ RD11_RS05360 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS05360 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS05380 IPR001395 Aldo/keto reductase RD11_RS05380 IPR023210 NADP-dependent oxidoreductase domain RD11_RS05385 IPR003010 Carbon-nitrogen hydrolase RD11_RS05385 IPR004563 Apolipoprotein N-acyltransferase RD11_RS05390 IPR000644 CBS domain RD11_RS05390 IPR005170 Transporter-associated domain RD11_RS05390 IPR016166 FAD-binding, type 2 RD11_RS05390 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS05395 IPR002036 Endoribonuclease YbeY RD11_RS05395 IPR020549 Endoribonuclease YbeY, conserved site RD11_RS05395 IPR023091 Metalloprotease catalytic domain, predicted RD11_RS05400 IPR003714 PhoH-like protein RD11_RS05400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05405 IPR002792 TRAM domain RD11_RS05405 IPR005839 Methylthiotransferase RD11_RS05405 IPR006463 tRNA-i(6)A37 modification enzyme MiaB RD11_RS05405 IPR006638 Elongator protein 3/MiaB/NifB RD11_RS05405 IPR007197 Radical SAM RD11_RS05405 IPR013848 Methylthiotransferase, N-terminal RD11_RS05405 IPR020612 Methylthiotransferase, conserved site RD11_RS05405 IPR023404 Radical SAM, alpha/beta horseshoe RD11_RS05405 IPR023970 Methylthiotransferase/radical SAM-type protein RD11_RS05415 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS05415 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS05420 IPR005665 Protein-export membrane protein SecF, bacterial RD11_RS05420 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD11_RS05420 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD11_RS05420 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD11_RS05425 IPR005791 Protein translocase subunit SecD RD11_RS05425 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RD11_RS05425 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RD11_RS05425 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RD11_RS05425 IPR027398 SecD export protein N-terminal TM domain RD11_RS05430 IPR003849 Preprotein translocase YajC RD11_RS05435 IPR002616 tRNA-guanine(15) transglycosylase-like RD11_RS05435 IPR004803 Queuine tRNA-ribosyltransferase RD11_RS05440 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RD11_RS05445 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C RD11_RS05445 IPR012338 Beta-lactamase/transpeptidase-like RD11_RS05450 IPR005765 Uracil phosphoribosyl transferase RD11_RS05450 IPR029057 Phosphoribosyltransferase-like RD11_RS05455 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS05455 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS05460 IPR003991 Pertactin virulence factor family RD11_RS05460 IPR003992 Pertactin RD11_RS05460 IPR004899 Pertactin, central region RD11_RS05460 IPR005546 Autotransporter beta-domain RD11_RS05460 IPR006315 Outer membrane autotransporter barrel RD11_RS05460 IPR011050 Pectin lyase fold/virulence factor RD11_RS05460 IPR012332 P22 tailspike C-terminal domain-like RD11_RS05465 IPR000878 Tetrapyrrole methylase RD11_RS05465 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RD11_RS05465 IPR006366 Uroporphyrin-III C-methyltransferase RD11_RS05465 IPR006367 Sirohaem synthase, N-terminal RD11_RS05465 IPR012409 Sirohaem synthase RD11_RS05465 IPR014776 Tetrapyrrole methylase, subdomain 2 RD11_RS05465 IPR014777 Tetrapyrrole methylase, subdomain 1 RD11_RS05465 IPR016040 NAD(P)-binding domain RD11_RS05465 IPR019478 Sirohaem synthase, dimerisation domain RD11_RS05465 IPR028281 Siroheme synthase, central domain RD11_RS05475 IPR010279 Protein of unknown function DUF883, ElaB RD11_RS05480 IPR009937 Protein of unknown function DUF1469 RD11_RS05490 IPR002830 UbiD decarboxylyase family RD11_RS05490 IPR012349 FMN-binding split barrel RD11_RS05490 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RD11_RS05495 IPR008258 Lytic transglycosylase-like SLT domain RD11_RS05495 IPR023346 Lysozyme-like domain RD11_RS05500 IPR004839 Aminotransferase, class I/classII RD11_RS05500 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS05500 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS05500 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS05505 IPR016166 FAD-binding, type 2 RD11_RS05510 IPR002505 Phosphate acetyl/butaryl transferase RD11_RS05510 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD11_RS05510 IPR012301 Malic enzyme, N-terminal domain RD11_RS05510 IPR012302 Malic enzyme, NAD-binding RD11_RS05510 IPR016040 NAD(P)-binding domain RD11_RS05520 IPR000468 Barstar (barnase inhibitor) RD11_RS05525 IPR001584 Integrase, catalytic core RD11_RS05525 IPR009057 Homeodomain-like RD11_RS05525 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05525 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05525 IPR012337 Ribonuclease H-like domain RD11_RS05525 IPR024967 DNA-binding domain, IS481-type RD11_RS05535 IPR003439 ABC transporter-like RD11_RS05535 IPR003593 AAA+ ATPase domain RD11_RS05535 IPR005670 Phosphate transport system permease protein 1 RD11_RS05535 IPR017871 ABC transporter, conserved site RD11_RS05535 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05540 IPR000515 MetI-like domain RD11_RS05540 IPR005672 Phosphate transport system permease protein PstA RD11_RS05545 IPR000515 MetI-like domain RD11_RS05545 IPR011864 Phosphate ABC transporter, permease protein PstC RD11_RS05550 IPR005673 ABC transporter, phosphate-binding protein PstS RD11_RS05550 IPR024370 PBP domain RD11_RS05555 IPR003414 Polyphosphate kinase RD11_RS05555 IPR024953 Polyphosphate kinase middle domain RD11_RS05555 IPR025198 Polyphosphate kinase N-terminal domain RD11_RS05555 IPR025200 Polyphosphate kinase C-terminal domain RD11_RS05560 IPR003695 Ppx/GppA phosphatase RD11_RS05560 IPR022371 Exopolyphosphatase RD11_RS05560 IPR030673 RD11_RS05560 RD11_RS05565 IPR016181 Acyl-CoA N-acyltransferase RD11_RS05570 IPR005841 Alpha-D-phosphohexomutase superfamily RD11_RS05570 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD11_RS05570 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD11_RS05570 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD11_RS05570 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD11_RS05570 IPR006352 Phosphoglucosamine mutase RD11_RS05570 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD11_RS05570 IPR016066 Alpha-D-phosphohexomutase, conserved site RD11_RS05575 IPR000489 Pterin-binding RD11_RS05575 IPR006390 Dihydropteroate synthase RD11_RS05575 IPR011005 Dihydropteroate synthase-like RD11_RS05580 IPR000642 Peptidase M41 RD11_RS05580 IPR003593 AAA+ ATPase domain RD11_RS05580 IPR003959 ATPase, AAA-type, core RD11_RS05580 IPR003960 ATPase, AAA-type, conserved site RD11_RS05580 IPR005936 Peptidase, FtsH RD11_RS05580 IPR011546 Peptidase M41, FtsH extracellular RD11_RS05580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05585 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RD11_RS05585 IPR015507 Ribosomal RNA large subunit methyltransferase E RD11_RS05585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS05590 IPR001890 RNA-binding, CRM domain RD11_RS05595 IPR001584 Integrase, catalytic core RD11_RS05595 IPR009057 Homeodomain-like RD11_RS05595 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05595 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05595 IPR012337 Ribonuclease H-like domain RD11_RS05595 IPR024967 DNA-binding domain, IS481-type RD11_RS05600 IPR018076 Type II secretion system F domain RD11_RS05610 IPR002575 Aminoglycoside phosphotransferase RD11_RS05610 IPR005280 Homoserine kinase ThrB RD11_RS05610 IPR011009 Protein kinase-like domain RD11_RS05615 IPR001269 tRNA-dihydrouridine synthase RD11_RS05615 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN RD11_RS05615 IPR013785 Aldolase-type TIM barrel RD11_RS05615 IPR018517 tRNA-dihydrouridine synthase, conserved site RD11_RS05620 IPR001584 Integrase, catalytic core RD11_RS05620 IPR009057 Homeodomain-like RD11_RS05620 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05620 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05620 IPR012337 Ribonuclease H-like domain RD11_RS05620 IPR024967 DNA-binding domain, IS481-type RD11_RS05625 IPR000644 CBS domain RD11_RS05630 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05630 IPR017039 Virulence factor BrkB RD11_RS05630 IPR023679 Uncharacterised protein family UPF0761, bacterial RD11_RS05635 IPR018643 Protein of unknown function DUF2069, membrane RD11_RS05640 IPR003846 Uncharacterised protein family UPF0061 RD11_RS05645 IPR001789 Signal transduction response regulator, receiver domain RD11_RS05645 IPR001867 Signal transduction response regulator, C-terminal RD11_RS05645 IPR011006 CheY-like superfamily RD11_RS05645 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05645 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS05650 IPR000160 GGDEF domain RD11_RS05650 IPR001633 EAL domain RD11_RS05650 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS05650 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS05650 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS05650 IPR029787 Nucleotide cyclase RD11_RS05655 IPR001584 Integrase, catalytic core RD11_RS05655 IPR009057 Homeodomain-like RD11_RS05655 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05655 IPR012337 Ribonuclease H-like domain RD11_RS05655 IPR024967 DNA-binding domain, IS481-type RD11_RS05660 IPR003439 ABC transporter-like RD11_RS05660 IPR003593 AAA+ ATPase domain RD11_RS05660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05660 IPR032823 RD11_RS05660 RD11_RS05665 IPR001851 ABC transporter, permease RD11_RS05675 IPR028081 Leucine-binding protein domain RD11_RS05675 IPR028082 Periplasmic binding protein-like I RD11_RS05680 IPR003439 ABC transporter-like RD11_RS05680 IPR003593 AAA+ ATPase domain RD11_RS05680 IPR017871 ABC transporter, conserved site RD11_RS05680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05685 IPR000873 AMP-dependent synthetase/ligase RD11_RS05685 IPR020845 AMP-binding, conserved site RD11_RS05690 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS05690 IPR009057 Homeodomain-like RD11_RS05690 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS05690 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS05690 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD11_RS05700 IPR002313 Lysine-tRNA ligase, class II RD11_RS05700 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RD11_RS05700 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD11_RS05700 IPR012340 Nucleic acid-binding, OB-fold RD11_RS05700 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RD11_RS05700 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RD11_RS05705 IPR002347 Glucose/ribitol dehydrogenase RD11_RS05705 IPR016040 NAD(P)-binding domain RD11_RS05710 IPR000352 Peptide chain release factor class I/class II RD11_RS05710 IPR004374 Peptide chain release factor 2 RD11_RS05710 IPR005139 Peptide chain release factor RD11_RS05710 IPR014720 Double-stranded RNA-binding domain RD11_RS05715 IPR001667 DDH domain RD11_RS05715 IPR003156 DHHA1 domain RD11_RS05715 IPR004610 Bacterial RecJ exonuclease RD11_RS05725 IPR003838 Permease FtsX-like RD11_RS05725 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family RD11_RS05725 IPR025857 MacB-like periplasmic core domain RD11_RS05730 IPR003439 ABC transporter-like RD11_RS05730 IPR003593 AAA+ ATPase domain RD11_RS05730 IPR011924 Lipoprotein releasing system, ATP-binding protein RD11_RS05730 IPR017871 ABC transporter, conserved site RD11_RS05730 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05735 IPR001130 TatD family RD11_RS05735 IPR018228 Deoxyribonuclease, TatD-related, conserved site RD11_RS05735 IPR032466 RD11_RS05735 RD11_RS05740 IPR005546 Autotransporter beta-domain RD11_RS05740 IPR006315 Outer membrane autotransporter barrel RD11_RS05740 IPR011050 Pectin lyase fold/virulence factor RD11_RS05740 IPR012332 P22 tailspike C-terminal domain-like RD11_RS05750 IPR024519 Domain of unknown function DUF3442, intimin/invasin RD11_RS05755 IPR004477 ComEC/Rec2-related protein RD11_RS05755 IPR025405 Domain of unknown function DUF4131 RD11_RS05760 IPR001584 Integrase, catalytic core RD11_RS05760 IPR009057 Homeodomain-like RD11_RS05760 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05760 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05760 IPR012337 Ribonuclease H-like domain RD11_RS05760 IPR024967 DNA-binding domain, IS481-type RD11_RS05765 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS05765 IPR029058 Alpha/Beta hydrolase fold RD11_RS05770 IPR003141 Polymerase/histidinol phosphatase, N-terminal RD11_RS05770 IPR004013 PHP, C-terminal RD11_RS05770 IPR016195 Polymerase/histidinol phosphatase-like RD11_RS05775 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RD11_RS05775 IPR006358 Transcription elongation factor GreB RD11_RS05775 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RD11_RS05775 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RD11_RS05775 IPR023459 Transcription elongation factor GreA/GreB family RD11_RS05775 IPR028624 Transcription elongation factor GreA/GreB RD11_RS05780 IPR001584 Integrase, catalytic core RD11_RS05780 IPR009057 Homeodomain-like RD11_RS05780 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05780 IPR012337 Ribonuclease H-like domain RD11_RS05780 IPR024967 DNA-binding domain, IS481-type RD11_RS05785 IPR000259 Fimbrial-type adhesion domain RD11_RS05785 IPR008966 Adhesion domain RD11_RS05790 IPR002505 Phosphate acetyl/butaryl transferase RD11_RS05790 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase RD11_RS05790 IPR012301 Malic enzyme, N-terminal domain RD11_RS05790 IPR012302 Malic enzyme, NAD-binding RD11_RS05790 IPR016040 NAD(P)-binding domain RD11_RS05795 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type RD11_RS05795 IPR005474 Transketolase, N-terminal RD11_RS05795 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD11_RS05795 IPR017600 Alpha-ketoglutarate dehydrogenase RD11_RS05795 IPR029061 Thiamin diphosphate-binding fold RD11_RS05795 IPR033247 RD11_RS05795 RD11_RS05800 IPR000485 AsnC-type HTH domain RD11_RS05800 IPR011008 Dimeric alpha-beta barrel RD11_RS05800 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05800 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS05800 IPR019888 Transcription regulator AsnC-type RD11_RS05805 IPR004813 Oligopeptide transporter, OPT superfamily RD11_RS05805 IPR004814 Oligopeptide transporter HI_0561 RD11_RS05815 IPR001017 Dehydrogenase, E1 component RD11_RS05815 IPR005475 Transketolase-like, pyrimidine-binding domain RD11_RS05815 IPR011603 2-oxoglutarate dehydrogenase E1 component RD11_RS05815 IPR029061 Thiamin diphosphate-binding fold RD11_RS05815 IPR031717 RD11_RS05815 RD11_RS05815 IPR032106 RD11_RS05815 RD11_RS05820 IPR000089 Biotin/lipoyl attachment RD11_RS05820 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RD11_RS05820 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RD11_RS05820 IPR004167 E3 binding RD11_RS05820 IPR006255 Dihydrolipoamide succinyltransferase RD11_RS05820 IPR011053 Single hybrid motif RD11_RS05820 IPR023213 Chloramphenicol acetyltransferase-like domain RD11_RS05825 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD11_RS05825 IPR006258 Dihydrolipoamide dehydrogenase RD11_RS05825 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD11_RS05825 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS05830 IPR005654 ATPase, AFG1-like RD11_RS05830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05835 IPR002347 Glucose/ribitol dehydrogenase RD11_RS05835 IPR016040 NAD(P)-binding domain RD11_RS05840 IPR000847 Transcription regulator HTH, LysR RD11_RS05840 IPR005119 LysR, substrate-binding RD11_RS05840 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05845 IPR001584 Integrase, catalytic core RD11_RS05845 IPR009057 Homeodomain-like RD11_RS05845 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05845 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05845 IPR012337 Ribonuclease H-like domain RD11_RS05845 IPR024967 DNA-binding domain, IS481-type RD11_RS05850 IPR005064 Bordetella uptake gene RD11_RS05855 IPR002347 Glucose/ribitol dehydrogenase RD11_RS05855 IPR016040 NAD(P)-binding domain RD11_RS05855 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS05860 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD11_RS05865 IPR010921 Trp repressor/replication initiator RD11_RS05865 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05865 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05865 IPR012337 Ribonuclease H-like domain RD11_RS05865 IPR024967 DNA-binding domain, IS481-type RD11_RS05870 IPR002305 Aminoacyl-tRNA synthetase, class Ic RD11_RS05870 IPR002306 Tryptophan-tRNA ligase RD11_RS05870 IPR010879 Domain of unknown function DUF1508 RD11_RS05870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS05870 IPR024109 Tryptophan-tRNA ligase, bacterial-type RD11_RS05875 IPR003029 Ribosomal protein S1, RNA-binding domain RD11_RS05875 IPR006641 YqgF/RNase H-like domain RD11_RS05875 IPR010994 RuvA domain 2-like RD11_RS05875 IPR012337 Ribonuclease H-like domain RD11_RS05875 IPR012340 Nucleic acid-binding, OB-fold RD11_RS05875 IPR018974 Tex-like protein, N-terminal RD11_RS05875 IPR022967 RNA-binding domain, S1 RD11_RS05875 IPR023097 Tex RuvX-like domain RD11_RS05875 IPR023319 Tex-like protein, HTH domain RD11_RS05875 IPR023323 Tex-like domain RD11_RS05875 IPR032639 RD11_RS05875 RD11_RS05880 IPR006555 ATP-dependent helicase, C-terminal RD11_RS05880 IPR010614 DEAD2 RD11_RS05880 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS05885 IPR011990 Tetratricopeptide-like helical domain RD11_RS05885 IPR017689 Outer membrane protein assembly factor BamD RD11_RS05890 IPR002942 RNA-binding S4 domain RD11_RS05890 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD11_RS05890 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RD11_RS05890 IPR006225 Pseudouridine synthase, RluC/RluD RD11_RS05890 IPR020103 Pseudouridine synthase, catalytic domain RD11_RS05895 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RD11_RS05895 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD11_RS05900 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain RD11_RS05900 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I RD11_RS05900 IPR029058 Alpha/Beta hydrolase fold RD11_RS05905 IPR002347 Glucose/ribitol dehydrogenase RD11_RS05905 IPR011283 Acetoacetyl-CoA reductase RD11_RS05905 IPR016040 NAD(P)-binding domain RD11_RS05905 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS05910 IPR007897 PHB accumulation regulatory RD11_RS05910 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RD11_RS05910 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RD11_RS05915 IPR018470 Periplasmic metal-binding protein Tp34-type RD11_RS05920 IPR008972 Cupredoxin RD11_RS05920 IPR028096 EfeO-type cupredoxin-like domain RD11_RS05925 IPR004923 Iron permease FTR1/Fip1/EfeU RD11_RS05930 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD11_RS05935 IPR003719 Phenazine biosynthesis PhzF protein RD11_RS05940 IPR001584 Integrase, catalytic core RD11_RS05940 IPR009057 Homeodomain-like RD11_RS05940 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS05940 IPR012337 Ribonuclease H-like domain RD11_RS05940 IPR024967 DNA-binding domain, IS481-type RD11_RS05945 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD11_RS05945 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS05950 IPR006680 Amidohydrolase 1 RD11_RS05950 IPR032466 RD11_RS05950 RD11_RS05955 IPR005064 Bordetella uptake gene RD11_RS05960 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD11_RS05960 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RD11_RS05960 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RD11_RS05960 IPR029017 Enolase N-terminal domain-like RD11_RS05960 IPR029065 Enolase C-terminal domain-like RD11_RS05965 IPR000847 Transcription regulator HTH, LysR RD11_RS05965 IPR005119 LysR, substrate-binding RD11_RS05965 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS05970 IPR002347 Glucose/ribitol dehydrogenase RD11_RS05970 IPR016040 NAD(P)-binding domain RD11_RS05975 IPR011701 Major facilitator superfamily RD11_RS05975 IPR020846 Major facilitator superfamily domain RD11_RS05980 IPR001734 Sodium/solute symporter RD11_RS05980 IPR031155 RD11_RS05980 RD11_RS05990 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RD11_RS05990 IPR027461 LD-carboxypeptidase A, C-terminal domain RD11_RS05990 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RD11_RS05990 IPR029062 Class I glutamine amidotransferase-like RD11_RS05995 IPR001303 Class II aldolase/adducin N-terminal RD11_RS06000 IPR000847 Transcription regulator HTH, LysR RD11_RS06000 IPR005119 LysR, substrate-binding RD11_RS06000 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06005 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD11_RS06005 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS06005 IPR013328 Dehydrogenase, multihelical RD11_RS06005 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD11_RS06005 IPR016040 NAD(P)-binding domain RD11_RS06005 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD11_RS06010 IPR005064 Bordetella uptake gene RD11_RS06015 IPR009569 Amino acid synthesis, putative RD11_RS06030 IPR005220 Viral OB-fold, YgiW RD11_RS06035 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD11_RS06040 IPR001584 Integrase, catalytic core RD11_RS06040 IPR009057 Homeodomain-like RD11_RS06040 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06040 IPR012337 Ribonuclease H-like domain RD11_RS06040 IPR024967 DNA-binding domain, IS481-type RD11_RS06045 IPR001584 Integrase, catalytic core RD11_RS06045 IPR009057 Homeodomain-like RD11_RS06045 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06045 IPR012337 Ribonuclease H-like domain RD11_RS06045 IPR024967 DNA-binding domain, IS481-type RD11_RS06050 IPR000620 Drug/metabolite transporter RD11_RS06055 IPR000847 Transcription regulator HTH, LysR RD11_RS06055 IPR005119 LysR, substrate-binding RD11_RS06055 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06060 IPR003439 ABC transporter-like RD11_RS06060 IPR003593 AAA+ ATPase domain RD11_RS06060 IPR017871 ABC transporter, conserved site RD11_RS06060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06060 IPR030679 RD11_RS06060 RD11_RS06065 IPR000515 MetI-like domain RD11_RS06065 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS06070 IPR000515 MetI-like domain RD11_RS06070 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS06075 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS06075 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD11_RS06080 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD11_RS06080 IPR004839 Aminotransferase, class I/classII RD11_RS06080 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS06080 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS06080 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS06085 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase RD11_RS06100 IPR019180 Oxidoreductase-like, N-terminal RD11_RS06105 IPR007298 Copper resistance lipoprotein NlpE RD11_RS06110 IPR003779 Carboxymuconolactone decarboxylase-like RD11_RS06110 IPR004675 Alkylhydroperoxidase AhpD core RD11_RS06110 IPR029032 AhpD-like RD11_RS06115 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS06115 IPR009959 Polyketide cyclase SnoaL-like domain RD11_RS06115 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06115 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD11_RS06115 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS06115 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS06115 IPR014284 RNA polymerase sigma-70 like domain RD11_RS06115 IPR032710 RD11_RS06115 RD11_RS06125 IPR024530 Protein of unknown function DUF3820 RD11_RS06130 IPR000086 NUDIX hydrolase domain RD11_RS06130 IPR015797 NUDIX hydrolase domain-like RD11_RS06130 IPR020084 NUDIX hydrolase, conserved site RD11_RS06135 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS06135 IPR012675 Beta-grasp domain RD11_RS06140 IPR029058 Alpha/Beta hydrolase fold RD11_RS06145 IPR000595 Cyclic nucleotide-binding domain RD11_RS06145 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06145 IPR012318 Helix-turn-helix motif, Crp-type RD11_RS06145 IPR014710 RmlC-like jelly roll fold RD11_RS06145 IPR018335 Transcription regulator HTH, Crp-type, conserved site RD11_RS06145 IPR018490 Cyclic nucleotide-binding-like RD11_RS06150 IPR001270 ClpA/B family RD11_RS06150 IPR003593 AAA+ ATPase domain RD11_RS06150 IPR003959 ATPase, AAA-type, core RD11_RS06150 IPR004176 Clp, N-terminal RD11_RS06150 IPR017730 Chaperonin ClpB RD11_RS06150 IPR018368 ClpA/B, conserved site 1 RD11_RS06150 IPR019489 Clp ATPase, C-terminal RD11_RS06150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06150 IPR028299 ClpA/B, conserved site 2 RD11_RS06160 IPR003991 Pertactin virulence factor family RD11_RS06160 IPR005546 Autotransporter beta-domain RD11_RS06160 IPR006315 Outer membrane autotransporter barrel RD11_RS06165 IPR003991 Pertactin virulence factor family RD11_RS06165 IPR005546 Autotransporter beta-domain RD11_RS06165 IPR006315 Outer membrane autotransporter barrel RD11_RS06170 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS06170 IPR009057 Homeodomain-like RD11_RS06170 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS06170 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD11_RS06175 IPR008322 Uncharacterised protein family UPF0261 RD11_RS06180 IPR009215 TIM-barrel domain, IGPS-like RD11_RS06180 IPR013785 Aldolase-type TIM barrel RD11_RS06180 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS06185 IPR019587 Polyketide cyclase/dehydrase RD11_RS06185 IPR023393 START-like domain RD11_RS06190 IPR000847 Transcription regulator HTH, LysR RD11_RS06190 IPR005119 LysR, substrate-binding RD11_RS06190 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06195 IPR011059 Metal-dependent hydrolase, composite domain RD11_RS06195 IPR013108 Amidohydrolase 3 RD11_RS06195 IPR023100 D-aminoacylase, insert domain RD11_RS06195 IPR032466 RD11_RS06195 RD11_RS06200 IPR005064 Bordetella uptake gene RD11_RS06205 IPR001094 Flavodoxin RD11_RS06205 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS06205 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD11_RS06205 IPR008254 Flavodoxin/nitric oxide synthase RD11_RS06205 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS06205 IPR029039 Flavoprotein-like RD11_RS06210 IPR003374 ApbE-like domain RD11_RS06210 IPR024932 Flavin transferase ApbE RD11_RS06215 IPR019613 Protein of unknown function DUF4198 RD11_RS06220 IPR014469 Protein of unknown function DUF2271 RD11_RS06225 IPR032307 RD11_RS06225 RD11_RS06230 IPR003439 ABC transporter-like RD11_RS06230 IPR003593 AAA+ ATPase domain RD11_RS06230 IPR017871 ABC transporter, conserved site RD11_RS06230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06235 IPR000412 ABC-2 transporter RD11_RS06235 IPR005981 ABC-2 type transporter, NodJ RD11_RS06235 IPR013525 ABC-2 type transporter RD11_RS06240 IPR005325 Protein of unknown function DUF308, membrane RD11_RS06245 IPR003691 Putative fluoride ion transporter CrcB RD11_RS06250 IPR002937 Amine oxidase RD11_RS06250 IPR017830 Squalene-associated FAD-dependent desaturase RD11_RS06250 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS06255 IPR002060 Squalene/phytoene synthase RD11_RS06255 IPR008949 Terpenoid synthase RD11_RS06255 IPR017828 Squalene/phytoene synthase HpnD RD11_RS06255 IPR019845 Squalene/phytoene synthase, conserved site RD11_RS06260 IPR002060 Squalene/phytoene synthase RD11_RS06260 IPR008949 Terpenoid synthase RD11_RS06260 IPR017827 Squalene synthase HpnC RD11_RS06265 IPR000821 Alanine racemase RD11_RS06265 IPR001608 Alanine racemase, N-terminal RD11_RS06265 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD11_RS06265 IPR011079 Alanine racemase, C-terminal RD11_RS06265 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RD11_RS06265 IPR029066 PLP-binding barrel RD11_RS06270 IPR002347 Glucose/ribitol dehydrogenase RD11_RS06270 IPR016040 NAD(P)-binding domain RD11_RS06280 IPR001584 Integrase, catalytic core RD11_RS06280 IPR009057 Homeodomain-like RD11_RS06280 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06280 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06280 IPR012337 Ribonuclease H-like domain RD11_RS06280 IPR024967 DNA-binding domain, IS481-type RD11_RS06285 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS06285 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06285 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD11_RS06285 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS06285 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS06285 IPR014284 RNA polymerase sigma-70 like domain RD11_RS06290 IPR002035 von Willebrand factor, type A RD11_RS06290 IPR021908 Protein of unknown function DUF3520 RD11_RS06290 IPR022156 Uncharacterised protein YfbK, N-terminal RD11_RS06295 IPR003593 AAA+ ATPase domain RD11_RS06295 IPR004504 DNA repair protein RadA RD11_RS06295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS06295 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS06295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06300 IPR002781 Transmembrane protein TauE like RD11_RS06310 IPR002528 Multi antimicrobial extrusion protein RD11_RS06320 IPR002150 Ribosomal protein L31 RD11_RS06320 IPR027493 Ribosomal protein L31 type B RD11_RS06325 IPR004981 Tryptophan 2,3-dioxygenase RD11_RS06325 IPR017485 Tryptophan 2,3-dioxygenase, bacterial RD11_RS06330 IPR007325 Kynurenine formamidase RD11_RS06330 IPR017484 Kynurenine formamidase, bacteria RD11_RS06335 IPR001405 RadC protein RD11_RS06335 IPR010994 RuvA domain 2-like RD11_RS06335 IPR025657 RadC-like JAB domain RD11_RS06340 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RD11_RS06345 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RD11_RS06350 IPR004045 Glutathione S-transferase, N-terminal RD11_RS06350 IPR004046 Glutathione S-transferase, C-terminal RD11_RS06350 IPR005955 Maleylacetoacetate isomerase RD11_RS06350 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS06350 IPR012336 Thioredoxin-like fold RD11_RS06365 IPR011051 RmlC-like cupin domain RD11_RS06365 IPR014710 RmlC-like jelly roll fold RD11_RS06370 IPR003495 CobW/HypB/UreG domain RD11_RS06370 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RD11_RS06370 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06375 IPR000415 Nitroreductase-like RD11_RS06375 IPR029479 Nitroreductase RD11_RS06380 IPR000847 Transcription regulator HTH, LysR RD11_RS06380 IPR005119 LysR, substrate-binding RD11_RS06380 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06390 IPR005234 Chromosome segregation/condensation protein ScpB RD11_RS06390 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06395 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RD11_RS06395 IPR002942 RNA-binding S4 domain RD11_RS06395 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F RD11_RS06395 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RD11_RS06395 IPR020103 Pseudouridine synthase, catalytic domain RD11_RS06400 IPR003728 Ribosome maturation factor RimP RD11_RS06400 IPR028989 Ribosome maturation factor RimP, N-terminal RD11_RS06400 IPR028998 Ribosome maturation factor RimP, C-terminal RD11_RS06405 IPR003029 Ribosomal protein S1, RNA-binding domain RD11_RS06405 IPR009019 K homology domain, prokaryotic type RD11_RS06405 IPR010213 Transcription termination factor NusA RD11_RS06405 IPR010214 Transcription termination factor NusA, C-terminal duplication RD11_RS06405 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical RD11_RS06405 IPR012340 Nucleic acid-binding, OB-fold RD11_RS06405 IPR013735 Transcription factor NusA, N-terminal RD11_RS06405 IPR015946 K homology domain-like, alpha/beta RD11_RS06405 IPR022967 RNA-binding domain, S1 RD11_RS06405 IPR025249 KH domain, NusA-like RD11_RS06405 IPR030842 RD11_RS06405 RD11_RS06410 IPR000178 Translation initiation factor aIF-2, bacterial-like RD11_RS06410 IPR005225 Small GTP-binding protein domain RD11_RS06410 IPR006847 Translation initiation factor IF-2, N-terminal RD11_RS06410 IPR009000 Translation protein, beta-barrel domain RD11_RS06410 IPR009061 DNA binding domain, putative RD11_RS06410 IPR013575 Initiation factor 2 associated domain, bacterial RD11_RS06410 IPR023115 Translation initiation factor IF- 2, domain 3 RD11_RS06410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06415 IPR000238 Ribosome-binding factor A RD11_RS06415 IPR015946 K homology domain-like, alpha/beta RD11_RS06415 IPR023799 Ribosome-binding factor A domain RD11_RS06420 IPR002501 Pseudouridine synthase II RD11_RS06420 IPR014780 tRNA pseudouridine synthase II, TruB RD11_RS06420 IPR020103 Pseudouridine synthase, catalytic domain RD11_RS06420 IPR032819 RD11_RS06420 RD11_RS06425 IPR000640 Translation elongation factor EFG, V domain RD11_RS06425 IPR000795 Elongation factor, GTP-binding domain RD11_RS06425 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD11_RS06425 IPR005225 Small GTP-binding protein domain RD11_RS06425 IPR006298 GTP-binding protein TypA RD11_RS06425 IPR009000 Translation protein, beta-barrel domain RD11_RS06425 IPR009022 Elongation factor G, III-V domain RD11_RS06425 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06425 IPR031157 RD11_RS06425 RD11_RS06430 IPR005138 Aerolysin/Pertussis toxin APT RD11_RS06430 IPR008992 Enterotoxin RD11_RS06430 IPR016187 C-type lectin fold RD11_RS06430 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD11_RS06435 IPR008992 Enterotoxin RD11_RS06440 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RD11_RS06440 IPR031100 RD11_RS06440 RD11_RS06445 IPR001098 DNA-directed DNA polymerase, family A, palm domain RD11_RS06445 IPR002298 DNA polymerase A RD11_RS06445 IPR002421 5'-3' exonuclease, N-terminal RD11_RS06445 IPR002562 3'-5' exonuclease domain RD11_RS06445 IPR008918 Helix-hairpin-helix motif, class 2 RD11_RS06445 IPR012337 Ribonuclease H-like domain RD11_RS06445 IPR018320 DNA polymerase 1 RD11_RS06445 IPR019760 DNA-directed DNA polymerase, family A, conserved site RD11_RS06445 IPR020045 5'-3' exonuclease, C-terminal domain RD11_RS06445 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RD11_RS06445 IPR029060 PIN domain-like RD11_RS06450 IPR003689 Zinc/iron permease RD11_RS06455 IPR002925 Dienelactone hydrolase RD11_RS06455 IPR029058 Alpha/Beta hydrolase fold RD11_RS06460 IPR003841 Sodium-dependent phosphate transport protein RD11_RS06460 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein RD11_RS06465 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form RD11_RS06465 IPR005130 Serine dehydratase-like, alpha subunit RD11_RS06465 IPR005131 Serine dehydratase beta chain RD11_RS06465 IPR029009 Allosteric substrate binding domain RD11_RS06470 IPR003828 Protein of unknown function DUF208 RD11_RS06475 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain RD11_RS06475 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RD11_RS06475 IPR023057 Glutamate-ammonia-ligase adenylyltransferase RD11_RS06485 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD11_RS06485 IPR003593 AAA+ ATPase domain RD11_RS06485 IPR004665 Transcription termination factor Rho RD11_RS06485 IPR011112 Rho termination factor, N-terminal RD11_RS06485 IPR011113 Rho termination factor, RNA-binding RD11_RS06485 IPR011129 Cold shock protein RD11_RS06485 IPR012340 Nucleic acid-binding, OB-fold RD11_RS06485 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06490 IPR005746 Thioredoxin RD11_RS06490 IPR012336 Thioredoxin-like fold RD11_RS06490 IPR013766 Thioredoxin domain RD11_RS06490 IPR017937 Thioredoxin, conserved site RD11_RS06495 IPR001241 DNA topoisomerase, type IIA RD11_RS06495 IPR002288 DNA gyrase B subunit, C-terminal RD11_RS06495 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS06495 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative RD11_RS06495 IPR006171 Toprim domain RD11_RS06495 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RD11_RS06495 IPR013759 DNA topoisomerase, type IIA, central domain RD11_RS06495 IPR013760 DNA topoisomerase, type IIA-like domain RD11_RS06495 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS06495 IPR018522 DNA topoisomerase, type IIA, conserved site RD11_RS06495 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS06500 IPR025588 YcxB-like protein RD11_RS06505 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RD11_RS06505 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative RD11_RS06505 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel RD11_RS06505 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RD11_RS06505 IPR013760 DNA topoisomerase, type IIA-like domain RD11_RS06505 IPR024946 Arginine repressor C-terminal-like domain RD11_RS06510 IPR007349 Domain of unknown function DUF418 RD11_RS06515 IPR001584 Integrase, catalytic core RD11_RS06515 IPR009057 Homeodomain-like RD11_RS06515 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06515 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06515 IPR012337 Ribonuclease H-like domain RD11_RS06515 IPR024967 DNA-binding domain, IS481-type RD11_RS06520 IPR000620 Drug/metabolite transporter RD11_RS06525 IPR004045 Glutathione S-transferase, N-terminal RD11_RS06525 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS06525 IPR012336 Thioredoxin-like fold RD11_RS06535 IPR001920 Asp/Glu racemase RD11_RS06535 IPR015942 Asp/Glu/hydantoin racemase RD11_RS06540 IPR003439 ABC transporter-like RD11_RS06540 IPR003593 AAA+ ATPase domain RD11_RS06540 IPR017871 ABC transporter, conserved site RD11_RS06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06540 IPR030660 RD11_RS06540 RD11_RS06545 IPR003439 ABC transporter-like RD11_RS06545 IPR003593 AAA+ ATPase domain RD11_RS06545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06545 IPR032823 RD11_RS06545 RD11_RS06550 IPR001851 ABC transporter, permease RD11_RS06550 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RD11_RS06555 IPR001851 ABC transporter, permease RD11_RS06560 IPR000709 Leu/Ile/Val-binding protein RD11_RS06560 IPR028081 Leucine-binding protein domain RD11_RS06560 IPR028082 Periplasmic binding protein-like I RD11_RS06565 IPR001584 Integrase, catalytic core RD11_RS06565 IPR009057 Homeodomain-like RD11_RS06565 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06565 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06565 IPR012337 Ribonuclease H-like domain RD11_RS06565 IPR024967 DNA-binding domain, IS481-type RD11_RS06570 IPR003744 Protein of unknown function DUF165 RD11_RS06575 IPR000304 Pyrroline-5-carboxylate reductase RD11_RS06575 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS06575 IPR016040 NAD(P)-binding domain RD11_RS06575 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RD11_RS06575 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RD11_RS06580 IPR006061 Bacterial extracellular solute-binding family 1, conserved site RD11_RS06585 IPR000515 MetI-like domain RD11_RS06590 IPR000515 MetI-like domain RD11_RS06590 IPR030165 RD11_RS06590 RD11_RS06595 IPR003439 ABC transporter-like RD11_RS06595 IPR003593 AAA+ ATPase domain RD11_RS06595 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS06595 IPR012340 Nucleic acid-binding, OB-fold RD11_RS06595 IPR013611 Transport-associated OB, type 2 RD11_RS06595 IPR017871 ABC transporter, conserved site RD11_RS06595 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06600 IPR000709 Leu/Ile/Val-binding protein RD11_RS06600 IPR028081 Leucine-binding protein domain RD11_RS06600 IPR028082 Periplasmic binding protein-like I RD11_RS06605 IPR010662 Putative hydrolase RBBP9/YdeN RD11_RS06605 IPR029058 Alpha/Beta hydrolase fold RD11_RS06610 IPR001584 Integrase, catalytic core RD11_RS06610 IPR009057 Homeodomain-like RD11_RS06610 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06610 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06610 IPR012337 Ribonuclease H-like domain RD11_RS06610 IPR024967 DNA-binding domain, IS481-type RD11_RS06620 IPR006696 Protein of unknown function DUF423 RD11_RS06625 IPR011979 Conserved hypothetical protein CHP02293 RD11_RS06625 IPR024467 Domain of unknown function DUF2384 RD11_RS06630 IPR014914 RES RD11_RS06635 IPR004872 Lipoprotein NlpA family RD11_RS06640 IPR000262 FMN-dependent dehydrogenase RD11_RS06640 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RD11_RS06640 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD11_RS06640 IPR013785 Aldolase-type TIM barrel RD11_RS06645 IPR003817 Phosphatidylserine decarboxylase-related RD11_RS06645 IPR033177 RD11_RS06645 RD11_RS06645 IPR033178 RD11_RS06645 RD11_RS06655 IPR021729 Domain of unknown function DUF3298 RD11_RS06660 IPR004143 Biotin/lipoate A/B protein ligase RD11_RS06670 IPR000182 GNAT domain RD11_RS06670 IPR016181 Acyl-CoA N-acyltransferase RD11_RS06675 IPR004045 Glutathione S-transferase, N-terminal RD11_RS06675 IPR004046 Glutathione S-transferase, C-terminal RD11_RS06675 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS06675 IPR012336 Thioredoxin-like fold RD11_RS06680 IPR000889 Glutathione peroxidase RD11_RS06680 IPR012336 Thioredoxin-like fold RD11_RS06680 IPR029760 Glutathione peroxidase conserved site RD11_RS06685 IPR010869 Protein of unknown function DUF1501 RD11_RS06690 IPR014917 Protein of unknown function DUF1800 RD11_RS06695 IPR011990 Tetratricopeptide-like helical domain RD11_RS06700 IPR003673 CoA-transferase family III RD11_RS06700 IPR023606 CoA-transferase family III domain RD11_RS06705 IPR006659 Arsenate reductase RD11_RS06705 IPR006660 Arsenate reductase-like RD11_RS06705 IPR012336 Thioredoxin-like fold RD11_RS06710 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD11_RS06710 IPR012336 Thioredoxin-like fold RD11_RS06710 IPR024706 Peroxiredoxin, AhpC-type RD11_RS06715 IPR001584 Integrase, catalytic core RD11_RS06715 IPR009057 Homeodomain-like RD11_RS06715 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06715 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06715 IPR012337 Ribonuclease H-like domain RD11_RS06715 IPR024967 DNA-binding domain, IS481-type RD11_RS06725 IPR024447 YXWGXW repeat RD11_RS06730 IPR032808 RD11_RS06730 RD11_RS06735 IPR001570 Peptidase M4, C-terminal RD11_RS06735 IPR013856 Peptidase M4 domain RD11_RS06735 IPR023612 Peptidase M4 RD11_RS06745 IPR001395 Aldo/keto reductase RD11_RS06745 IPR023210 NADP-dependent oxidoreductase domain RD11_RS06750 IPR006015 Universal stress protein A RD11_RS06750 IPR006016 UspA RD11_RS06750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS06765 IPR000524 Transcription regulator HTH, GntR RD11_RS06765 IPR004839 Aminotransferase, class I/classII RD11_RS06765 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06765 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS06765 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS06765 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS06770 IPR001608 Alanine racemase, N-terminal RD11_RS06770 IPR011078 Uncharacterised protein family UPF0001 RD11_RS06770 IPR029066 PLP-binding barrel RD11_RS06775 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase RD11_RS06775 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD11_RS06775 IPR023479 Pyridoxal kinase RD11_RS06775 IPR029056 Ribokinase-like RD11_RS06785 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD11_RS06785 IPR012767 Malto-oligosyltrehalose synthase RD11_RS06785 IPR013781 Glycoside hydrolase, catalytic domain RD11_RS06785 IPR013797 Maltooligosyl trehalose synthase, N-terminal RD11_RS06785 IPR015902 Glycoside hydrolase, family 13 RD11_RS06785 IPR017853 Glycoside hydrolase, superfamily RD11_RS06790 IPR003385 Glycoside hydrolase, family 77 RD11_RS06790 IPR013781 Glycoside hydrolase, catalytic domain RD11_RS06790 IPR017853 Glycoside hydrolase, superfamily RD11_RS06800 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD11_RS06800 IPR012768 Malto-oligosyltrehalose trehalohydrolase RD11_RS06800 IPR013781 Glycoside hydrolase, catalytic domain RD11_RS06800 IPR013783 Immunoglobulin-like fold RD11_RS06800 IPR014756 Immunoglobulin E-set RD11_RS06800 IPR015902 Glycoside hydrolase, family 13 RD11_RS06800 IPR017853 Glycoside hydrolase, superfamily RD11_RS06800 IPR022567 Domain of unknown function DUF3459 RD11_RS06805 IPR004193 Glycoside hydrolase, family 13, N-terminal RD11_RS06805 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD11_RS06805 IPR011837 Glycogen debranching enzyme, GlgX type RD11_RS06805 IPR013780 Glycosyl hydrolase, family 13, all-beta RD11_RS06805 IPR013781 Glycoside hydrolase, catalytic domain RD11_RS06805 IPR013783 Immunoglobulin-like fold RD11_RS06805 IPR014756 Immunoglobulin E-set RD11_RS06805 IPR015902 Glycoside hydrolase, family 13 RD11_RS06805 IPR017853 Glycoside hydrolase, superfamily RD11_RS06810 IPR004193 Glycoside hydrolase, family 13, N-terminal RD11_RS06810 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD11_RS06810 IPR006048 Alpha-amylase, C-terminal all beta RD11_RS06810 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB RD11_RS06810 IPR013780 Glycosyl hydrolase, family 13, all-beta RD11_RS06810 IPR013781 Glycoside hydrolase, catalytic domain RD11_RS06810 IPR013783 Immunoglobulin-like fold RD11_RS06810 IPR014756 Immunoglobulin E-set RD11_RS06810 IPR015902 Glycoside hydrolase, family 13 RD11_RS06810 IPR017853 Glycoside hydrolase, superfamily RD11_RS06815 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD11_RS06815 IPR011009 Protein kinase-like domain RD11_RS06815 IPR012810 Trehalose synthase/alpha-amylase, N-terminal RD11_RS06815 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain RD11_RS06815 IPR013780 Glycosyl hydrolase, family 13, all-beta RD11_RS06815 IPR013781 Glycoside hydrolase, catalytic domain RD11_RS06815 IPR015902 Glycoside hydrolase, family 13 RD11_RS06815 IPR017853 Glycoside hydrolase, superfamily RD11_RS06815 IPR032091 RD11_RS06815 RD11_RS06820 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RD11_RS06820 IPR013781 Glycoside hydrolase, catalytic domain RD11_RS06820 IPR015902 Glycoside hydrolase, family 13 RD11_RS06820 IPR017853 Glycoside hydrolase, superfamily RD11_RS06825 IPR017853 Glycoside hydrolase, superfamily RD11_RS06825 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S RD11_RS06830 IPR001584 Integrase, catalytic core RD11_RS06830 IPR009057 Homeodomain-like RD11_RS06830 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06830 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06830 IPR012337 Ribonuclease H-like domain RD11_RS06830 IPR024967 DNA-binding domain, IS481-type RD11_RS06840 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RD11_RS06840 IPR002471 Peptidase S9, serine active site RD11_RS06840 IPR029058 Alpha/Beta hydrolase fold RD11_RS06845 IPR021519 Protein of unknown function DUF3182 RD11_RS06850 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RD11_RS06855 IPR001584 Integrase, catalytic core RD11_RS06855 IPR009057 Homeodomain-like RD11_RS06855 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06855 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06855 IPR012337 Ribonuclease H-like domain RD11_RS06855 IPR024967 DNA-binding domain, IS481-type RD11_RS06865 IPR001736 Phospholipase D/Transphosphatidylase RD11_RS06865 IPR025202 Phospholipase D-like domain RD11_RS06865 IPR030872 RD11_RS06865 RD11_RS06870 IPR005135 Endonuclease/exonuclease/phosphatase RD11_RS06875 IPR005149 Transcription regulator PadR N-terminal RD11_RS06875 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06885 IPR003991 Pertactin virulence factor family RD11_RS06885 IPR005546 Autotransporter beta-domain RD11_RS06885 IPR006315 Outer membrane autotransporter barrel RD11_RS06885 IPR011050 Pectin lyase fold/virulence factor RD11_RS06885 IPR012332 P22 tailspike C-terminal domain-like RD11_RS06890 IPR012337 Ribonuclease H-like domain RD11_RS06890 IPR019993 RecB family nuclease, TM0106, putative RD11_RS06890 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06895 IPR000847 Transcription regulator HTH, LysR RD11_RS06895 IPR005119 LysR, substrate-binding RD11_RS06895 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06900 IPR005025 NADPH-dependent FMN reductase-like RD11_RS06900 IPR029039 Flavoprotein-like RD11_RS06905 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD11_RS06905 IPR011206 Citrate lyase beta subunit-like RD11_RS06905 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS06910 IPR000524 Transcription regulator HTH, GntR RD11_RS06910 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS06910 IPR011711 GntR, C-terminal RD11_RS06910 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06915 IPR003781 CoA-binding RD11_RS06915 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS06915 IPR016040 NAD(P)-binding domain RD11_RS06915 IPR016102 Succinyl-CoA synthetase-like RD11_RS06915 IPR032875 RD11_RS06915 RD11_RS06920 IPR005064 Bordetella uptake gene RD11_RS06925 IPR002020 Citrate synthase-like RD11_RS06925 IPR016142 Citrate synthase-like, large alpha subdomain RD11_RS06925 IPR016143 Citrate synthase-like, small alpha subdomain RD11_RS06930 IPR003673 CoA-transferase family III RD11_RS06930 IPR023606 CoA-transferase family III domain RD11_RS06935 IPR005064 Bordetella uptake gene RD11_RS06940 IPR000843 Transcription regulator HTH, LacI RD11_RS06940 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06940 IPR028082 Periplasmic binding protein-like I RD11_RS06945 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD11_RS06945 IPR004431 3-isopropylmalate dehydratase, small subunit RD11_RS06945 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS06945 IPR015937 Aconitase/isopropylmalate dehydratase RD11_RS06955 IPR005064 Bordetella uptake gene RD11_RS06960 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD11_RS06960 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RD11_RS06960 IPR029017 Enolase N-terminal domain-like RD11_RS06960 IPR029065 Enolase C-terminal domain-like RD11_RS06965 IPR003710 Ketopantoate reductase ApbA/PanE RD11_RS06965 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS06965 IPR013328 Dehydrogenase, multihelical RD11_RS06965 IPR013332 Ketopantoate reductase, N-terminal domain RD11_RS06965 IPR013752 Ketopantoate reductase, C-terminal domain RD11_RS06965 IPR016040 NAD(P)-binding domain RD11_RS06970 IPR001584 Integrase, catalytic core RD11_RS06970 IPR009057 Homeodomain-like RD11_RS06970 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS06970 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS06970 IPR012337 Ribonuclease H-like domain RD11_RS06970 IPR024967 DNA-binding domain, IS481-type RD11_RS06975 IPR003439 ABC transporter-like RD11_RS06975 IPR003593 AAA+ ATPase domain RD11_RS06975 IPR017871 ABC transporter, conserved site RD11_RS06975 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS06975 IPR030679 RD11_RS06975 RD11_RS06980 IPR000515 MetI-like domain RD11_RS06980 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS06985 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS06985 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD11_RS06990 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS06990 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS06995 IPR006135 Type III secretion system substrate exporter RD11_RS06995 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB RD11_RS06995 IPR029025 Type III secretion system substrate exporter, C-terminal RD11_RS07005 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RD11_RS07005 IPR003593 AAA+ ATPase domain RD11_RS07005 IPR020006 Signal-recognition particle (SRP)-type GTPase RD11_RS07005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07010 IPR007809 FlgN-like domain RD11_RS07015 IPR007412 Anti-sigma-28 factor, FlgM RD11_RS07015 IPR031316 RD11_RS07015 RD11_RS07020 IPR013974 SAF domain RD11_RS07020 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RD11_RS07025 IPR001444 Flagellar basal body rod protein, N-terminal RD11_RS07025 IPR006300 Flagellar basal-body rod protein FlgB RD11_RS07030 IPR001444 Flagellar basal body rod protein, N-terminal RD11_RS07030 IPR006299 Flagellar basal-body rod protein FlgC RD11_RS07030 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD11_RS07030 IPR019776 Flagellar basal body rod protein, conserved site RD11_RS07035 IPR005648 Flagellar hook capping protein RD11_RS07035 IPR025963 FlgD Tudor-like domain RD11_RS07035 IPR025965 FlgD Ig-like domain RD11_RS07040 IPR001444 Flagellar basal body rod protein, N-terminal RD11_RS07040 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD11_RS07040 IPR011491 Flagellar basal body FlaE RD11_RS07040 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD11_RS07045 IPR001444 Flagellar basal body rod protein, N-terminal RD11_RS07045 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD11_RS07045 IPR019776 Flagellar basal body rod protein, conserved site RD11_RS07045 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD11_RS07050 IPR001444 Flagellar basal body rod protein, N-terminal RD11_RS07050 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD11_RS07050 IPR012834 Flagellar basal-body rod FlgG RD11_RS07050 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RD11_RS07055 IPR000527 Flagellar L-ring protein RD11_RS07060 IPR001782 Flagellar P-ring protein RD11_RS07065 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RD11_RS07065 IPR013377 Flagellar rod assembly protein/muramidase FlgJ RD11_RS07065 IPR019301 Flagellar protein FlgJ, N-terminal RD11_RS07070 IPR002371 Flagellar hook-associated protein, FlgK RD11_RS07070 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RD11_RS07075 IPR001029 Flagellin, D0/D1 domain RD11_RS07075 IPR013384 Flagellar hook-associated protein 3 RD11_RS07080 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD11_RS07080 IPR003660 HAMP linker domain RD11_RS07080 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD11_RS07080 IPR004090 Chemotaxis methyl-accepting receptor RD11_RS07085 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD11_RS07085 IPR003660 HAMP linker domain RD11_RS07085 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD11_RS07085 IPR004090 Chemotaxis methyl-accepting receptor RD11_RS07090 IPR000014 PAS domain RD11_RS07090 IPR001610 PAC motif RD11_RS07090 IPR003660 HAMP linker domain RD11_RS07090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD11_RS07090 IPR004090 Chemotaxis methyl-accepting receptor RD11_RS07090 IPR013655 PAS fold-3 RD11_RS07095 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS07095 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS07100 IPR002010 Type III secretion system inner membrane R protein RD11_RS07100 IPR006303 Flagellar biosynthesis protein FliR RD11_RS07105 IPR002191 Bacterial export protein family 3 RD11_RS07105 IPR006305 Flagellar biosynthesis protein FliQ RD11_RS07110 IPR005837 Flagellar transport protein FliP RD11_RS07110 IPR005838 Type III secretion system inner membrane P protein RD11_RS07115 IPR022781 Flagellar biosynthesis protein, FliO RD11_RS07120 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb RD11_RS07120 IPR001543 Surface presentation of antigen (SpoA) RD11_RS07120 IPR012826 Flagellar motor switch FliN RD11_RS07125 IPR001543 Surface presentation of antigen (SpoA) RD11_RS07125 IPR001689 Flagellar motor switch protein FliM RD11_RS07125 IPR028976 CheC-like domain RD11_RS07130 IPR005503 Flagellar basal body-associated protein FliL RD11_RS07140 IPR001584 Integrase, catalytic core RD11_RS07140 IPR009057 Homeodomain-like RD11_RS07140 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07140 IPR012337 Ribonuclease H-like domain RD11_RS07140 IPR024967 DNA-binding domain, IS481-type RD11_RS07145 IPR021136 Flagellar hook-length control protein-like, C-terminal RD11_RS07150 IPR012823 Flagellar export FliJ RD11_RS07150 IPR018006 Flagellar FliJ, proteobacteria RD11_RS07155 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD11_RS07155 IPR003593 AAA+ ATPase domain RD11_RS07155 IPR005714 ATPase, type III secretion system, FliI/YscN RD11_RS07155 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD11_RS07155 IPR020005 Flagellar export ATPase FliI, clade 1 RD11_RS07155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07155 IPR032463 RD11_RS07155 RD11_RS07160 IPR000563 Flagellar assembly protein FliH RD11_RS07160 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RD11_RS07165 IPR000090 Flagellar motor switch protein FliG RD11_RS07165 IPR011002 Flagellar motor switch protein FliG, alpha-helical RD11_RS07165 IPR023087 RD11_RS07165 RD11_RS07165 IPR028263 Flagellar motor switch protein FliG, N-terminal domain RD11_RS07165 IPR032779 RD11_RS07165 RD11_RS07170 IPR000067 Flagellar M-ring protein FliF RD11_RS07170 IPR006182 Secretory protein YscJ/FliF RD11_RS07170 IPR013556 Flagellar M-ring C-terminal RD11_RS07175 IPR001624 Flagellar hook-basal body complex protein FliE RD11_RS07185 IPR006135 Type III secretion system substrate exporter RD11_RS07185 IPR029025 Type III secretion system substrate exporter, C-terminal RD11_RS07190 IPR021136 Flagellar hook-length control protein-like, C-terminal RD11_RS07200 IPR008622 Flagellar protein FliT RD11_RS07205 IPR003713 Flagellar protein FliS RD11_RS07210 IPR003481 Flagellar hook-associated protein 2, N-terminal RD11_RS07210 IPR010809 Flagellar hook-associated 2, C-terminal RD11_RS07210 IPR010810 Flagellin hook, IN motif RD11_RS07215 IPR005186 Flagellar protein FlaG protein RD11_RS07220 IPR001645 Folylpolyglutamate synthetase RD11_RS07220 IPR004101 Mur ligase, C-terminal RD11_RS07220 IPR013221 Mur ligase, central RD11_RS07220 IPR018109 Folylpolyglutamate synthetase, conserved site RD11_RS07225 IPR007730 Sporulation-related domain RD11_RS07230 IPR003825 Colicin V production, CvpA RD11_RS07235 IPR000836 Phosphoribosyltransferase domain RD11_RS07235 IPR005854 Amidophosphoribosyl transferase RD11_RS07235 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS07235 IPR029057 Phosphoribosyltransferase-like RD11_RS07240 IPR003752 Disulphide bond formation protein DsbB/BdbC RD11_RS07240 IPR023380 Disulphide bond formation protein DsbB-like domain RD11_RS07245 IPR002771 Multiple antibiotic resistance (MarC)-related RD11_RS07250 IPR002934 Nucleotidyl transferase domain RD11_RS07250 IPR003607 HD/PDEase domain RD11_RS07250 IPR006674 HD domain RD11_RS07250 IPR010043 Protein-PII uridylyltransferase RD11_RS07250 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RD11_RS07255 IPR000994 Peptidase M24, structural domain RD11_RS07255 IPR001714 Peptidase M24, methionine aminopeptidase RD11_RS07255 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RD11_RS07260 IPR001865 Ribosomal protein S2 RD11_RS07260 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RD11_RS07260 IPR018130 Ribosomal protein S2, conserved site RD11_RS07260 IPR023591 Ribosomal protein S2, flavodoxin-like domain RD11_RS07265 IPR001816 Translation elongation factor EFTs/EF1B RD11_RS07265 IPR009060 UBA-like RD11_RS07265 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RD11_RS07265 IPR018101 Translation elongation factor Ts, conserved site RD11_RS07270 IPR001048 Aspartate/glutamate/uridylate kinase RD11_RS07270 IPR011817 Uridylate kinase RD11_RS07270 IPR015963 Uridylate kinase, bacteria RD11_RS07275 IPR002661 Ribosome recycling factor RD11_RS07275 IPR023584 Ribosome recycling factor domain RD11_RS07280 IPR001441 Decaprenyl diphosphate synthase-like RD11_RS07280 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RD11_RS07285 IPR000374 Phosphatidate cytidylyltransferase RD11_RS07290 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD11_RS07290 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal RD11_RS07290 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal RD11_RS07290 IPR016040 NAD(P)-binding domain RD11_RS07290 IPR026877 DXP reductoisomerase C-terminal domain RD11_RS07295 IPR001478 PDZ domain RD11_RS07295 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RD11_RS07295 IPR008915 Peptidase M50 RD11_RS07300 IPR000184 Bacterial surface antigen (D15) RD11_RS07300 IPR010827 Surface antigen variable number RD11_RS07300 IPR023707 Outer membrane protein assembly factor BamA RD11_RS07305 IPR005632 Chaperone protein Skp RD11_RS07305 IPR024930 Skp domain RD11_RS07310 IPR001451 Bacterial transferase hexapeptide repeat RD11_RS07310 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RD11_RS07310 IPR011004 Trimeric LpxA-like RD11_RS07310 IPR018357 Hexapeptide transferase, conserved site RD11_RS07310 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region RD11_RS07315 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RD11_RS07315 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RD11_RS07315 IPR029069 HotDog domain RD11_RS07320 IPR001451 Bacterial transferase hexapeptide repeat RD11_RS07320 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RD11_RS07320 IPR011004 Trimeric LpxA-like RD11_RS07320 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal RD11_RS07325 IPR003835 Glycosyl transferase, family 19 RD11_RS07330 IPR001352 Ribonuclease HII/HIII RD11_RS07330 IPR012337 Ribonuclease H-like domain RD11_RS07330 IPR022898 Ribonuclease HII RD11_RS07330 IPR024567 Ribonuclease HII/HIII domain RD11_RS07335 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD11_RS07335 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD11_RS07335 IPR029028 Alpha/beta knot methyltransferases RD11_RS07335 IPR029064 50S ribosomal protein L30e-like RD11_RS07340 IPR005177 Bifunctional kinase-pyrophosphorylase RD11_RS07340 IPR026530 Phosphoenolpyruvate synthase regulatory protein RD11_RS07345 IPR000121 PEP-utilising enzyme, C-terminal RD11_RS07345 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RD11_RS07345 IPR006319 Phosphoenolpyruvate synthase RD11_RS07345 IPR008279 PEP-utilising enzyme, mobile domain RD11_RS07345 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS07345 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS07345 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS07345 IPR018274 PEP-utilising enzyme, active site RD11_RS07345 IPR023151 PEP-utilising enzyme, conserved site RD11_RS07350 IPR017926 Glutamine amidotransferase RD11_RS07350 IPR029062 Class I glutamine amidotransferase-like RD11_RS07355 IPR012340 Nucleic acid-binding, OB-fold RD11_RS07360 IPR001584 Integrase, catalytic core RD11_RS07360 IPR009057 Homeodomain-like RD11_RS07360 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07360 IPR012337 Ribonuclease H-like domain RD11_RS07360 IPR024967 DNA-binding domain, IS481-type RD11_RS07365 IPR001107 Band 7 protein RD11_RS07365 IPR001972 Stomatin family RD11_RS07365 IPR032435 RD11_RS07365 RD11_RS07370 IPR000160 GGDEF domain RD11_RS07370 IPR029787 Nucleotide cyclase RD11_RS07375 IPR000037 SsrA-binding protein RD11_RS07375 IPR020081 SsrA-binding protein, conserved site RD11_RS07375 IPR023620 Small protein B RD11_RS07380 IPR001584 Integrase, catalytic core RD11_RS07380 IPR009057 Homeodomain-like RD11_RS07380 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07380 IPR012337 Ribonuclease H-like domain RD11_RS07380 IPR024967 DNA-binding domain, IS481-type RD11_RS07385 IPR005031 Streptomyces cyclase/dehydrase RD11_RS07385 IPR023393 START-like domain RD11_RS07390 IPR005346 RnfH protein RD11_RS07390 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD11_RS07395 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS07395 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS07395 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS07395 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS07395 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS07400 IPR029045 ClpP/crotonase-like domain RD11_RS07400 IPR032259 RD11_RS07400 RD11_RS07405 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD11_RS07405 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD11_RS07405 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS07405 IPR011548 3-hydroxyisobutyrate dehydrogenase RD11_RS07405 IPR013328 Dehydrogenase, multihelical RD11_RS07405 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD11_RS07405 IPR016040 NAD(P)-binding domain RD11_RS07405 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD11_RS07410 IPR003736 Phenylacetic acid degradation-related domain RD11_RS07410 IPR006683 Thioesterase superfamily RD11_RS07410 IPR029069 HotDog domain RD11_RS07415 IPR008217 Domain of unknown function DUF125, transmembrane RD11_RS07420 IPR001584 Integrase, catalytic core RD11_RS07420 IPR009057 Homeodomain-like RD11_RS07420 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07420 IPR012337 Ribonuclease H-like domain RD11_RS07420 IPR024967 DNA-binding domain, IS481-type RD11_RS07425 IPR001584 Integrase, catalytic core RD11_RS07425 IPR009057 Homeodomain-like RD11_RS07425 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07425 IPR012337 Ribonuclease H-like domain RD11_RS07425 IPR024967 DNA-binding domain, IS481-type RD11_RS07430 IPR001585 Transaldolase RD11_RS07430 IPR004730 Transaldolase type 1 RD11_RS07430 IPR013785 Aldolase-type TIM barrel RD11_RS07430 IPR018225 Transaldolase, active site RD11_RS07435 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain RD11_RS07435 IPR006274 Carbamoyl-phosphate synthase, small subunit RD11_RS07435 IPR017926 Glutamine amidotransferase RD11_RS07435 IPR029062 Class I glutamine amidotransferase-like RD11_RS07440 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD11_RS07440 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RD11_RS07440 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RD11_RS07440 IPR006275 Carbamoyl-phosphate synthase, large subunit RD11_RS07440 IPR011607 Methylglyoxal synthase-like domain RD11_RS07440 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS07440 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS07440 IPR016185 Pre-ATP-grasp domain RD11_RS07450 IPR013078 Histidine phosphatase superfamily, clade-1 RD11_RS07450 IPR029033 Histidine phosphatase superfamily RD11_RS07455 IPR000847 Transcription regulator HTH, LysR RD11_RS07455 IPR005119 LysR, substrate-binding RD11_RS07455 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07460 IPR003439 ABC transporter-like RD11_RS07460 IPR003593 AAA+ ATPase domain RD11_RS07460 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS07460 IPR013611 Transport-associated OB, type 2 RD11_RS07460 IPR017871 ABC transporter, conserved site RD11_RS07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07465 IPR000515 MetI-like domain RD11_RS07470 IPR001584 Integrase, catalytic core RD11_RS07470 IPR009057 Homeodomain-like RD11_RS07470 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07470 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07470 IPR012337 Ribonuclease H-like domain RD11_RS07470 IPR024967 DNA-binding domain, IS481-type RD11_RS07480 IPR001633 EAL domain RD11_RS07480 IPR029787 Nucleotide cyclase RD11_RS07485 IPR000453 Chorismate synthase RD11_RS07485 IPR020541 Chorismate synthase, conserved site RD11_RS07490 IPR001915 Peptidase M48 RD11_RS07495 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain RD11_RS07495 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07500 IPR001453 Molybdopterin binding domain RD11_RS07500 IPR005110 MoeA, N-terminal and linker domain RD11_RS07500 IPR005111 MoeA, C-terminal, domain IV RD11_RS07505 IPR013482 Molybdenum cofactor guanylyltransferase RD11_RS07505 IPR025877 MobA-like NTP transferase domain RD11_RS07505 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS07510 IPR000808 Mrp, conserved site RD11_RS07510 IPR002744 Domain of unknown function DUF59 RD11_RS07510 IPR019591 Mrp/NBP35 ATP-binding protein RD11_RS07510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07515 IPR021736 Protein of unknown function DUF3305 RD11_RS07520 IPR021735 Protein of unknown function DUF3306 RD11_RS07525 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD11_RS07525 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS07530 IPR020945 DMSO/Nitrate reductase chaperone RD11_RS07535 IPR014177 Formate dehydrogenase, TAT signal-containing RD11_RS07540 IPR006656 Molybdopterin oxidoreductase RD11_RS07540 IPR006657 Molydopterin dinucleotide-binding domain RD11_RS07540 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RD11_RS07540 IPR009010 Aspartate decarboxylase-like domain RD11_RS07540 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RD11_RS07550 IPR012336 Thioredoxin-like fold RD11_RS07555 IPR006471 Formate dehydrogenase, gamma subunit RD11_RS07555 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RD11_RS07555 IPR016174 Di-haem cytochrome, transmembrane RD11_RS07565 IPR000847 Transcription regulator HTH, LysR RD11_RS07565 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07565 IPR024370 PBP domain RD11_RS07570 IPR000515 MetI-like domain RD11_RS07575 IPR003439 ABC transporter-like RD11_RS07575 IPR003593 AAA+ ATPase domain RD11_RS07575 IPR017871 ABC transporter, conserved site RD11_RS07575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07580 IPR024370 PBP domain RD11_RS07585 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD11_RS07585 IPR004430 3-isopropylmalate dehydratase, large subunit RD11_RS07585 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD11_RS07585 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD11_RS07585 IPR015937 Aconitase/isopropylmalate dehydratase RD11_RS07585 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD11_RS07590 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD11_RS07590 IPR004431 3-isopropylmalate dehydratase, small subunit RD11_RS07590 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS07590 IPR015937 Aconitase/isopropylmalate dehydratase RD11_RS07595 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD11_RS07595 IPR004429 Isopropylmalate dehydrogenase RD11_RS07595 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD11_RS07595 IPR024084 Isopropylmalate dehydrogenase-like domain RD11_RS07600 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RD11_RS07600 IPR000534 Semialdehyde dehydrogenase, NAD-binding RD11_RS07600 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type RD11_RS07600 IPR012080 Aspartate-semialdehyde dehydrogenase RD11_RS07600 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RD11_RS07600 IPR016040 NAD(P)-binding domain RD11_RS07605 IPR018392 LysM domain RD11_RS07605 IPR020012 Motility protein FimV, N-terminal RD11_RS07610 IPR001406 Pseudouridine synthase I, TruA RD11_RS07610 IPR020094 Pseudouridine synthase I, TruA, N-terminal RD11_RS07610 IPR020095 Pseudouridine synthase I, TruA, C-terminal RD11_RS07610 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RD11_RS07610 IPR020103 Pseudouridine synthase, catalytic domain RD11_RS07615 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS07615 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RD11_RS07615 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD11_RS07620 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS07625 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS07630 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain RD11_RS07630 IPR011060 Ribulose-phosphate binding barrel RD11_RS07630 IPR013785 Aldolase-type TIM barrel RD11_RS07640 IPR001584 Integrase, catalytic core RD11_RS07640 IPR009057 Homeodomain-like RD11_RS07640 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07640 IPR012337 Ribonuclease H-like domain RD11_RS07640 IPR024967 DNA-binding domain, IS481-type RD11_RS07645 IPR005583 Uncharacterised protein family UPF0246 RD11_RS07650 IPR011701 Major facilitator superfamily RD11_RS07650 IPR020846 Major facilitator superfamily domain RD11_RS07660 IPR002477 Peptidoglycan binding-like RD11_RS07660 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RD11_RS07665 IPR000878 Tetrapyrrole methylase RD11_RS07665 IPR008189 rRNA small subunit methyltransferase I RD11_RS07665 IPR014776 Tetrapyrrole methylase, subdomain 2 RD11_RS07670 IPR003697 Maf-like protein RD11_RS07670 IPR029001 Inosine triphosphate pyrophosphatase-like RD11_RS07675 IPR003772 Protein of unknown function DUF177 RD11_RS07680 IPR002677 Ribosomal protein L32p RD11_RS07680 IPR011332 Zinc-binding ribosomal protein RD11_RS07685 IPR003664 Fatty acid synthesis PlsX protein RD11_RS07685 IPR012281 Phospholipid biosynthesis protein, PlsX-like RD11_RS07685 IPR024084 Isopropylmalate dehydrogenase-like domain RD11_RS07690 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RD11_RS07690 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD11_RS07690 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD11_RS07690 IPR016039 Thiolase-like RD11_RS07695 IPR001227 Acyl transferase domain RD11_RS07695 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RD11_RS07695 IPR014043 Acyl transferase RD11_RS07695 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD11_RS07695 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RD11_RS07695 IPR020801 Polyketide synthase, acyl transferase domain RD11_RS07695 IPR024925 Malonyl CoA-acyl carrier protein transacylase RD11_RS07700 IPR002347 Glucose/ribitol dehydrogenase RD11_RS07700 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RD11_RS07700 IPR016040 NAD(P)-binding domain RD11_RS07700 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS07705 IPR003231 Acyl carrier protein (ACP) RD11_RS07705 IPR006162 Phosphopantetheine attachment site RD11_RS07705 IPR009081 Acyl carrier protein-like RD11_RS07710 IPR014030 Beta-ketoacyl synthase, N-terminal RD11_RS07710 IPR014031 Beta-ketoacyl synthase, C-terminal RD11_RS07710 IPR016039 Thiolase-like RD11_RS07710 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RD11_RS07710 IPR018201 Beta-ketoacyl synthase, active site RD11_RS07710 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RD11_RS07720 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RD11_RS07720 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS07720 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07720 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD11_RS07720 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS07720 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS07720 IPR014284 RNA polymerase sigma-70 like domain RD11_RS07720 IPR014286 RNA polymerase sigma-70 RpoE type RD11_RS07725 IPR005572 Anti sigma-E protein RseA, N-terminal RD11_RS07730 IPR005588 MucB/RseB RD11_RS07730 IPR033434 RD11_RS07730 RD11_RS07730 IPR033436 RD11_RS07730 RD11_RS07735 IPR001478 PDZ domain RD11_RS07735 IPR001940 Peptidase S1C RD11_RS07735 IPR009003 Trypsin-like cysteine/serine peptidase domain RD11_RS07735 IPR011782 Peptidase S1C, Do RD11_RS07740 IPR000640 Translation elongation factor EFG, V domain RD11_RS07740 IPR000795 Elongation factor, GTP-binding domain RD11_RS07740 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD11_RS07740 IPR005225 Small GTP-binding protein domain RD11_RS07740 IPR006297 Elongation factor 4 RD11_RS07740 IPR009000 Translation protein, beta-barrel domain RD11_RS07740 IPR009022 Elongation factor G, III-V domain RD11_RS07740 IPR013842 GTP-binding protein LepA, C-terminal RD11_RS07740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07740 IPR031157 RD11_RS07740 RD11_RS07745 IPR000223 Peptidase S26A, signal peptidase I RD11_RS07745 IPR015927 Peptidase S24/S26A/S26B/S26C RD11_RS07745 IPR019533 Peptidase S26 RD11_RS07745 IPR019756 Peptidase S26A, signal peptidase I, serine active site RD11_RS07745 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RD11_RS07745 IPR019759 Peptidase S24/S26A/S26B RD11_RS07745 IPR019766 Peptidase S26A, all-beta subdomain RD11_RS07745 IPR028360 Peptidase S24/S26, beta-ribbon domain RD11_RS07750 IPR000999 Ribonuclease III domain RD11_RS07750 IPR011907 Ribonuclease III RD11_RS07750 IPR014720 Double-stranded RNA-binding domain RD11_RS07755 IPR004044 K Homology domain, type 2 RD11_RS07755 IPR005225 Small GTP-binding protein domain RD11_RS07755 IPR005662 GTP-binding protein Era RD11_RS07755 IPR006073 GTP binding domain RD11_RS07755 IPR009019 K homology domain, prokaryotic type RD11_RS07755 IPR015946 K homology domain-like, alpha/beta RD11_RS07755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07760 IPR003717 Recombination protein O, RecO RD11_RS07760 IPR012340 Nucleic acid-binding, OB-fold RD11_RS07760 IPR022572 DNA replication/recombination mediator RecO, N-terminal RD11_RS07765 IPR000847 Transcription regulator HTH, LysR RD11_RS07765 IPR005119 LysR, substrate-binding RD11_RS07765 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07770 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD11_RS07775 IPR001584 Integrase, catalytic core RD11_RS07775 IPR009057 Homeodomain-like RD11_RS07775 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07775 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07775 IPR012337 Ribonuclease H-like domain RD11_RS07775 IPR024967 DNA-binding domain, IS481-type RD11_RS07780 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD11_RS07785 IPR005064 Bordetella uptake gene RD11_RS07790 IPR006214 Bax inhibitor 1-related RD11_RS07800 IPR007459 DNA polymerase III chi subunit, HolC RD11_RS07805 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RD11_RS07805 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RD11_RS07805 IPR011356 Leucine aminopeptidase/peptidase B RD11_RS07805 IPR023042 Peptidase M17, leucine aminopeptidase RD11_RS07810 IPR005495 Permease YjgP/YjgQ, predicted RD11_RS07810 IPR030922 RD11_RS07810 RD11_RS07815 IPR000847 Transcription regulator HTH, LysR RD11_RS07815 IPR005119 LysR, substrate-binding RD11_RS07815 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07820 IPR028081 Leucine-binding protein domain RD11_RS07820 IPR028082 Periplasmic binding protein-like I RD11_RS07825 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD11_RS07825 IPR015590 Aldehyde dehydrogenase domain RD11_RS07825 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS07825 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS07825 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS07825 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS07830 IPR000847 Transcription regulator HTH, LysR RD11_RS07830 IPR005119 LysR, substrate-binding RD11_RS07830 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07835 IPR001584 Integrase, catalytic core RD11_RS07835 IPR009057 Homeodomain-like RD11_RS07835 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07835 IPR012337 Ribonuclease H-like domain RD11_RS07835 IPR024967 DNA-binding domain, IS481-type RD11_RS07840 IPR016772 Uncharacterised conserved protein UCP020408 RD11_RS07845 IPR000064 Endopeptidase, NLPC/P60 domain RD11_RS07850 IPR000873 AMP-dependent synthetase/ligase RD11_RS07850 IPR012694 Propionate--CoA ligase RD11_RS07850 IPR020845 AMP-binding, conserved site RD11_RS07850 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS07855 IPR005624 Domain of unknown function DUF336 RD11_RS07860 IPR020846 Major facilitator superfamily domain RD11_RS07860 IPR024671 Autophagy-related protein 22-like RD11_RS07865 IPR000873 AMP-dependent synthetase/ligase RD11_RS07865 IPR011904 Acetate-CoA ligase RD11_RS07865 IPR020845 AMP-binding, conserved site RD11_RS07865 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS07865 IPR032387 RD11_RS07865 RD11_RS07870 IPR000620 Drug/metabolite transporter RD11_RS07875 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase RD11_RS07875 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS07875 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS07875 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS07875 IPR023603 Threonine aldolase RD11_RS07880 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD11_RS07880 IPR011008 Dimeric alpha-beta barrel RD11_RS07885 IPR001128 Cytochrome P450 RD11_RS07890 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD11_RS07890 IPR016040 NAD(P)-binding domain RD11_RS07895 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase RD11_RS07895 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS07900 IPR029069 HotDog domain RD11_RS07910 IPR004164 Coenzyme A transferase active site RD11_RS07910 IPR004165 Coenzyme A transferase family I RD11_RS07910 IPR012791 3-oxoacid CoA-transferase, subunit B RD11_RS07915 IPR000281 Helix-turn-helix protein RpiR RD11_RS07915 IPR001347 Sugar isomerase (SIS) RD11_RS07915 IPR009057 Homeodomain-like RD11_RS07915 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07920 IPR000246 Peptidase T2, asparaginase 2 RD11_RS07920 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS07925 IPR003439 ABC transporter-like RD11_RS07925 IPR003593 AAA+ ATPase domain RD11_RS07925 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS07925 IPR017871 ABC transporter, conserved site RD11_RS07925 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07930 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS07930 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site RD11_RS07930 IPR030678 RD11_RS07930 RD11_RS07935 IPR000515 MetI-like domain RD11_RS07940 IPR000515 MetI-like domain RD11_RS07940 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD11_RS07945 IPR005321 Peptidase S58, DmpA RD11_RS07945 IPR016117 ArgJ-like domain RD11_RS07950 IPR007035 Peptidase M55, D-aminopeptidase RD11_RS07950 IPR027476 D-aminopeptidase, N-terminal RD11_RS07955 IPR000587 Creatinase, N-terminal RD11_RS07955 IPR000994 Peptidase M24, structural domain RD11_RS07955 IPR028980 Creatinase/Aminopeptidase P, N-terminal RD11_RS07955 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RD11_RS07955 IPR032416 RD11_RS07955 RD11_RS07960 IPR001584 Integrase, catalytic core RD11_RS07960 IPR009057 Homeodomain-like RD11_RS07960 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS07960 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07960 IPR012337 Ribonuclease H-like domain RD11_RS07960 IPR024967 DNA-binding domain, IS481-type RD11_RS07965 IPR004468 CTP synthase RD11_RS07965 IPR017456 CTP synthase, N-terminal RD11_RS07965 IPR017926 Glutamine amidotransferase RD11_RS07965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS07965 IPR029062 Class I glutamine amidotransferase-like RD11_RS07970 IPR006218 DAHP synthetase I/KDSA RD11_RS07970 IPR006269 3-deoxy-8-phosphooctulonate synthase RD11_RS07970 IPR013785 Aldolase-type TIM barrel RD11_RS07975 IPR010753 Protein of unknown function DUF1330 RD11_RS07975 IPR011008 Dimeric alpha-beta barrel RD11_RS07980 IPR000941 Enolase RD11_RS07980 IPR020809 Enolase, conserved site RD11_RS07980 IPR020810 Enolase, C-terminal RD11_RS07980 IPR020811 Enolase, N-terminal RD11_RS07980 IPR029017 Enolase N-terminal domain-like RD11_RS07980 IPR029065 Enolase C-terminal domain-like RD11_RS07985 IPR007060 Septum formation initiator FtsL/DivIC RD11_RS07985 IPR023081 Cell division protein FtsB RD11_RS07990 IPR001867 Signal transduction response regulator, C-terminal RD11_RS07990 IPR011990 Tetratricopeptide-like helical domain RD11_RS07990 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS07990 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS07990 IPR019734 Tetratricopeptide repeat RD11_RS07995 IPR016040 NAD(P)-binding domain RD11_RS08000 IPR003779 Carboxymuconolactone decarboxylase-like RD11_RS08000 IPR004675 Alkylhydroperoxidase AhpD core RD11_RS08000 IPR029032 AhpD-like RD11_RS08005 IPR011051 RmlC-like cupin domain RD11_RS08005 IPR013096 Cupin 2, conserved barrel RD11_RS08005 IPR014710 RmlC-like jelly roll fold RD11_RS08015 IPR000397 Heat shock protein Hsp33 RD11_RS08015 IPR016153 Heat shock protein Hsp33, N-terminal RD11_RS08015 IPR016154 Heat shock protein Hsp33, C-terminal RD11_RS08015 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RD11_RS08020 IPR001451 Bacterial transferase hexapeptide repeat RD11_RS08020 IPR011004 Trimeric LpxA-like RD11_RS08025 IPR000873 AMP-dependent synthetase/ligase RD11_RS08025 IPR020845 AMP-binding, conserved site RD11_RS08025 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS08030 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD11_RS08030 IPR029052 Metallo-dependent phosphatase-like RD11_RS08035 IPR010432 RDD RD11_RS08045 IPR000241 Putative RNA methylase domain RD11_RS08045 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD11_RS08045 IPR004114 THUMP RD11_RS08045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS08050 IPR005265 Uncharacterised protein family UPF0093 RD11_RS08055 IPR005656 MmgE/PrpD RD11_RS08055 IPR012705 2-methylcitrate dehydratase PrpD RD11_RS08060 IPR007400 PrpF protein RD11_RS08060 IPR012709 PrpF, AcnD-accessory RD11_RS08065 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD11_RS08065 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD11_RS08065 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent RD11_RS08065 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS08065 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD11_RS08065 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD11_RS08065 IPR015937 Aconitase/isopropylmalate dehydratase RD11_RS08070 IPR002020 Citrate synthase-like RD11_RS08070 IPR011278 2-methylcitrate synthase/citrate synthase type I RD11_RS08070 IPR016142 Citrate synthase-like, large alpha subdomain RD11_RS08070 IPR016143 Citrate synthase-like, small alpha subdomain RD11_RS08070 IPR019810 Citrate synthase active site RD11_RS08070 IPR024176 Citrate synthase, bacterial-type RD11_RS08080 IPR001236 Lactate/malate dehydrogenase, N-terminal RD11_RS08080 IPR001557 L-lactate/malate dehydrogenase RD11_RS08080 IPR010945 Malate dehydrogenase, type 2 RD11_RS08080 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RD11_RS08080 IPR016040 NAD(P)-binding domain RD11_RS08080 IPR022383 Lactate/malate dehydrogenase, C-terminal RD11_RS08085 IPR000524 Transcription regulator HTH, GntR RD11_RS08085 IPR011663 UbiC transcription regulator-associated RD11_RS08085 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08085 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS08090 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RD11_RS08090 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RD11_RS08095 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit RD11_RS08095 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor RD11_RS08100 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RD11_RS08100 IPR003953 FAD binding domain RD11_RS08100 IPR011281 Succinate dehydrogenase, flavoprotein subunit RD11_RS08100 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RD11_RS08100 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RD11_RS08100 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS08100 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD11_RS08100 IPR030664 RD11_RS08100 RD11_RS08105 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS08105 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RD11_RS08105 IPR009051 Alpha-helical ferredoxin RD11_RS08105 IPR012675 Beta-grasp domain RD11_RS08105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS08105 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RD11_RS08110 IPR005631 Flavinator of succinate dehydrogenase RD11_RS08115 IPR002020 Citrate synthase-like RD11_RS08115 IPR010953 Citrate synthase, type I RD11_RS08115 IPR016142 Citrate synthase-like, large alpha subdomain RD11_RS08115 IPR016143 Citrate synthase-like, small alpha subdomain RD11_RS08115 IPR019810 Citrate synthase active site RD11_RS08115 IPR024176 Citrate synthase, bacterial-type RD11_RS08130 IPR001584 Integrase, catalytic core RD11_RS08130 IPR009057 Homeodomain-like RD11_RS08130 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08130 IPR012337 Ribonuclease H-like domain RD11_RS08130 IPR024967 DNA-binding domain, IS481-type RD11_RS08135 IPR004681 TRAP transporter permease protein RD11_RS08135 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS08140 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS08145 IPR004682 TRAP dicarboxylate transporter RD11_RS08145 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS08150 IPR003838 Permease FtsX-like RD11_RS08155 IPR001486 Globin, truncated bacterial-like RD11_RS08155 IPR009050 Globin-like RD11_RS08155 IPR012292 Globin, structural domain RD11_RS08155 IPR019795 Globin, bacterial-like, conserved site RD11_RS08160 IPR010440 Lipopolysaccharide kinase RD11_RS08160 IPR011009 Protein kinase-like domain RD11_RS08160 IPR022826 3-deoxy-D-manno-octulosonic acid kinase RD11_RS08165 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RD11_RS08170 IPR003439 ABC transporter-like RD11_RS08170 IPR003593 AAA+ ATPase domain RD11_RS08170 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit RD11_RS08170 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS08170 IPR013611 Transport-associated OB, type 2 RD11_RS08170 IPR017871 ABC transporter, conserved site RD11_RS08170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS08175 IPR000515 MetI-like domain RD11_RS08180 IPR000515 MetI-like domain RD11_RS08185 IPR006504 Transcriptional regulator Spx/MgsR RD11_RS08185 IPR006660 Arsenate reductase-like RD11_RS08185 IPR012336 Thioredoxin-like fold RD11_RS08190 IPR003180 Methylpurine-DNA glycosylase (MPG) RD11_RS08190 IPR011034 Formyl transferase, C-terminal-like RD11_RS08195 IPR019647 PhoP regulatory network protein YrbL RD11_RS08200 IPR003798 DNA recombination RmuC RD11_RS08205 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS08205 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS08205 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS08205 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS08210 IPR004788 Ribose 5-phosphate isomerase, type A RD11_RS08210 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup RD11_RS08215 IPR026022 PhoU domain RD11_RS08215 IPR028366 Phosphate transport system protein PhoU RD11_RS08220 IPR007312 Phosphoesterase RD11_RS08220 IPR008475 Bacterial phospholipase C, C-terminal domain RD11_RS08225 IPR007457 Fe(II) trafficking protein YggX RD11_RS08230 IPR000182 GNAT domain RD11_RS08230 IPR001048 Aspartate/glutamate/uridylate kinase RD11_RS08230 IPR010167 Amino-acid N-acetyltransferase (ArgA) RD11_RS08230 IPR016181 Acyl-CoA N-acyltransferase RD11_RS08235 IPR001650 Helicase, C-terminal RD11_RS08235 IPR003593 AAA+ ATPase domain RD11_RS08235 IPR007502 Helicase-associated domain RD11_RS08235 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type RD11_RS08235 IPR011709 Domain of unknown function DUF1605 RD11_RS08235 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS08235 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal RD11_RS08235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS08240 IPR007803 Arginine/Asparagine/Proline hydroxylase RD11_RS08240 IPR027443 Isopenicillin N synthase-like RD11_RS08245 IPR003141 Polymerase/histidinol phosphatase, N-terminal RD11_RS08245 IPR004013 PHP, C-terminal RD11_RS08245 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD11_RS08245 IPR004805 DNA polymerase III, alpha subunit RD11_RS08245 IPR011708 Bacterial DNA polymerase III, alpha subunit RD11_RS08245 IPR012340 Nucleic acid-binding, OB-fold RD11_RS08245 IPR016195 Polymerase/histidinol phosphatase-like RD11_RS08245 IPR029460 DNA polymerase, helix-hairpin-helix motif RD11_RS08250 IPR001296 Glycosyl transferase, family 1 RD11_RS08250 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS08255 IPR002509 Polysaccharide deacetylase RD11_RS08255 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD11_RS08260 IPR001173 Glycosyltransferase 2-like RD11_RS08260 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS08265 IPR001296 Glycosyl transferase, family 1 RD11_RS08265 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS08270 IPR000917 Sulfatase RD11_RS08270 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD11_RS08270 IPR017850 Alkaline-phosphatase-like, core domain RD11_RS08275 IPR002509 Polysaccharide deacetylase RD11_RS08275 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD11_RS08280 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS08285 IPR005358 Putative zinc- or iron-chelating domain containing protein RD11_RS08290 IPR003848 Domain of unknown function DUF218 RD11_RS08290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS08295 IPR002201 Glycosyl transferase, family 9 RD11_RS08300 IPR003439 ABC transporter-like RD11_RS08300 IPR003593 AAA+ ATPase domain RD11_RS08300 IPR011527 ABC transporter type 1, transmembrane domain RD11_RS08300 IPR011917 ABC transporter, lipid A export, MsbA RD11_RS08300 IPR017871 ABC transporter, conserved site RD11_RS08300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS08305 IPR011701 Major facilitator superfamily RD11_RS08305 IPR020846 Major facilitator superfamily domain RD11_RS08310 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS08310 IPR009057 Homeodomain-like RD11_RS08310 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS08315 IPR001086 Prephenate dehydratase RD11_RS08315 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RD11_RS08320 IPR004659 Ribonuclease E/G RD11_RS08320 IPR012340 Nucleic acid-binding, OB-fold RD11_RS08320 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RD11_RS08320 IPR022967 RNA-binding domain, S1 RD11_RS08325 IPR001584 Integrase, catalytic core RD11_RS08325 IPR009057 Homeodomain-like RD11_RS08325 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08325 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08325 IPR012337 Ribonuclease H-like domain RD11_RS08325 IPR024967 DNA-binding domain, IS481-type RD11_RS08360 IPR003991 Pertactin virulence factor family RD11_RS08360 IPR004899 Pertactin, central region RD11_RS08360 IPR005546 Autotransporter beta-domain RD11_RS08360 IPR006315 Outer membrane autotransporter barrel RD11_RS08360 IPR011050 Pectin lyase fold/virulence factor RD11_RS08360 IPR012332 P22 tailspike C-terminal domain-like RD11_RS08365 IPR003697 Maf-like protein RD11_RS08365 IPR029001 Inosine triphosphate pyrophosphatase-like RD11_RS08370 IPR003742 SPOUT methyltransferase, predicted RD11_RS08370 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD11_RS08370 IPR029028 Alpha/beta knot methyltransferases RD11_RS08375 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RD11_RS08380 IPR004821 Cytidyltransferase-like domain RD11_RS08380 IPR005248 Probable nicotinate-nucleotide adenylyltransferase RD11_RS08380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS08385 IPR001260 Coproporphyrinogen III oxidase, aerobic RD11_RS08385 IPR018375 Coproporphyrinogen III oxidase, conserved site RD11_RS08390 IPR000115 Phosphoribosylglycinamide synthetase RD11_RS08390 IPR011054 Rudiment single hybrid motif RD11_RS08390 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS08390 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS08390 IPR016185 Pre-ATP-grasp domain RD11_RS08390 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RD11_RS08390 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD11_RS08390 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RD11_RS08395 IPR002876 Transcriptional regulator TACO1-like RD11_RS08395 IPR017856 Integrase, N-terminal zinc-binding domain-like RD11_RS08395 IPR026563 Transcriptional regulator TACO1-like, domain 2 RD11_RS08395 IPR026564 Transcriptional regulator TACO1-like, domain 3 RD11_RS08395 IPR029072 YebC-like RD11_RS08400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS08400 IPR033186 RD11_RS08400 RD11_RS08405 IPR001463 Sodium:alanine symporter RD11_RS08410 IPR005814 Aminotransferase class-III RD11_RS08410 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS08410 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS08410 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS08415 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD11_RS08415 IPR016040 NAD(P)-binding domain RD11_RS08420 IPR015590 Aldehyde dehydrogenase domain RD11_RS08420 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS08420 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS08420 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS08420 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS08420 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD11_RS08425 IPR000620 Drug/metabolite transporter RD11_RS08430 IPR002933 Peptidase M20 RD11_RS08430 IPR010158 Amidase, hydantoinase/carbamoylase RD11_RS08430 IPR011650 Peptidase M20, dimerisation domain RD11_RS08435 IPR000286 Histone deacetylase superfamily RD11_RS08435 IPR023801 Histone deacetylase domain RD11_RS08440 IPR011051 RmlC-like cupin domain RD11_RS08440 IPR013096 Cupin 2, conserved barrel RD11_RS08440 IPR014710 RmlC-like jelly roll fold RD11_RS08445 IPR004632 4-aminobutyrate aminotransferase, bacterial RD11_RS08445 IPR005814 Aminotransferase class-III RD11_RS08445 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS08445 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS08445 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS08450 IPR001584 Integrase, catalytic core RD11_RS08450 IPR009057 Homeodomain-like RD11_RS08450 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08450 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08450 IPR012337 Ribonuclease H-like domain RD11_RS08450 IPR024967 DNA-binding domain, IS481-type RD11_RS08455 IPR003439 ABC transporter-like RD11_RS08455 IPR003593 AAA+ ATPase domain RD11_RS08455 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS08455 IPR017871 ABC transporter, conserved site RD11_RS08455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS08460 IPR000515 MetI-like domain RD11_RS08460 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD11_RS08465 IPR000515 MetI-like domain RD11_RS08470 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS08470 IPR030678 RD11_RS08470 RD11_RS08475 IPR000524 Transcription regulator HTH, GntR RD11_RS08475 IPR004839 Aminotransferase, class I/classII RD11_RS08475 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08475 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS08475 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS08480 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD11_RS08480 IPR011829 Tartrate dehydrogenase RD11_RS08480 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD11_RS08480 IPR024084 Isopropylmalate dehydrogenase-like domain RD11_RS08485 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD11_RS08485 IPR011701 Major facilitator superfamily RD11_RS08485 IPR020846 Major facilitator superfamily domain RD11_RS08500 IPR000835 MarR-type HTH domain RD11_RS08500 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08500 IPR023187 Transcriptional regulator MarR-type, conserved site RD11_RS08505 IPR000620 Drug/metabolite transporter RD11_RS08510 IPR000620 Drug/metabolite transporter RD11_RS08515 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS08515 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD11_RS08515 IPR011032 GroES (chaperonin 10)-like RD11_RS08515 IPR013149 Alcohol dehydrogenase, C-terminal RD11_RS08515 IPR013154 Alcohol dehydrogenase GroES-like RD11_RS08515 IPR016040 NAD(P)-binding domain RD11_RS08515 IPR020843 Polyketide synthase, enoylreductase RD11_RS08520 IPR001915 Peptidase M48 RD11_RS08520 IPR022919 Peptidase M48, protease HtpX, putative RD11_RS08530 IPR001763 Rhodanese-like domain RD11_RS08535 IPR017670 Phosphonate degradation operon associated HDIG domain protein RD11_RS08540 IPR000847 Transcription regulator HTH, LysR RD11_RS08540 IPR005119 LysR, substrate-binding RD11_RS08540 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08540 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type RD11_RS08545 IPR003439 ABC transporter-like RD11_RS08545 IPR003593 AAA+ ATPase domain RD11_RS08545 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS08545 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 RD11_RS08545 IPR017871 ABC transporter, conserved site RD11_RS08545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS08550 IPR000515 MetI-like domain RD11_RS08550 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative RD11_RS08555 IPR006323 Phosphonoacetaldehyde hydrolase RD11_RS08555 IPR006439 HAD hydrolase, subfamily IA RD11_RS08555 IPR023198 Phosphoglycolate phosphatase, domain 2 RD11_RS08555 IPR023214 HAD-like domain RD11_RS08560 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative RD11_RS08560 IPR026045 Ferric binding protein RD11_RS08565 IPR006076 FAD dependent oxidoreductase RD11_RS08565 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS08570 IPR001584 Integrase, catalytic core RD11_RS08570 IPR009057 Homeodomain-like RD11_RS08570 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08570 IPR012337 Ribonuclease H-like domain RD11_RS08570 IPR024967 DNA-binding domain, IS481-type RD11_RS08585 IPR006042 Xanthine/uracil permease RD11_RS08585 IPR006043 Xanthine/uracil/vitamin C permease RD11_RS08590 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding RD11_RS08590 IPR003660 HAMP linker domain RD11_RS08590 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain RD11_RS08590 IPR004090 Chemotaxis methyl-accepting receptor RD11_RS08595 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RD11_RS08595 IPR006359 Transcription elongation factor GreA RD11_RS08595 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RD11_RS08595 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RD11_RS08595 IPR023459 Transcription elongation factor GreA/GreB family RD11_RS08595 IPR028624 Transcription elongation factor GreA/GreB RD11_RS08600 IPR001584 Integrase, catalytic core RD11_RS08600 IPR009057 Homeodomain-like RD11_RS08600 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08600 IPR012337 Ribonuclease H-like domain RD11_RS08600 IPR024967 DNA-binding domain, IS481-type RD11_RS08605 IPR010261 Tir chaperone protein (CesT) family RD11_RS08610 IPR021123 Type III secretion, needle-protein-like RD11_RS08620 IPR012843 Type III secretion system YscD/HrpQ RD11_RS08625 IPR001712 Type III secretion system FHIPEP RD11_RS08625 IPR006302 Type III secretion protein HrcV RD11_RS08625 IPR025505 FHIPEP conserved site RD11_RS08630 IPR011990 Tetratricopeptide-like helical domain RD11_RS08635 IPR012672 Type III secretion system YscX RD11_RS08640 IPR012673 Type III secretion system chaperone SycN RD11_RS08645 IPR010812 Hypersensitivity response secretion-like, HrpJ RD11_RS08645 IPR013351 Type III secretion system effector delivery regulator TyeA-related RD11_RS08645 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC RD11_RS08645 IPR015144 Type III secretion system effector delivery regulator TyeA RD11_RS08660 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD RD11_RS08660 IPR011990 Tetratricopeptide-like helical domain RD11_RS08660 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup RD11_RS08670 IPR006972 Secretion system effector C, SseC-like RD11_RS08675 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD RD11_RS08675 IPR011990 Tetratricopeptide-like helical domain RD11_RS08680 IPR011990 Tetratricopeptide-like helical domain RD11_RS08685 IPR012670 Type III secretion system, YscI/HrpB RD11_RS08690 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ RD11_RS08690 IPR006182 Secretory protein YscJ/FliF RD11_RS08695 IPR009510 Type III secretion system, secretion protein K RD11_RS08700 IPR010586 Nodulation NolV RD11_RS08700 IPR012842 Type III secretion system HrpE/YscL RD11_RS08700 IPR028987 F-type ATP synthase subunit B-like, membrane domain RD11_RS08705 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD11_RS08705 IPR003593 AAA+ ATPase domain RD11_RS08705 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD11_RS08705 IPR005714 ATPase, type III secretion system, FliI/YscN RD11_RS08705 IPR013380 ATPase, type III secretion system, H+-transporting RD11_RS08705 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD11_RS08705 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS08710 IPR009929 Type III secretion sytem,YscO RD11_RS08720 IPR001543 Surface presentation of antigen (SpoA) RD11_RS08720 IPR003283 Type III secretion system outer membrane, SpaO RD11_RS08720 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO RD11_RS08725 IPR005773 Yop virulence translocation protein R RD11_RS08725 IPR005838 Type III secretion system inner membrane P protein RD11_RS08730 IPR002191 Bacterial export protein family 3 RD11_RS08730 IPR006306 Type III secretion protein HrpO RD11_RS08735 IPR002010 Type III secretion system inner membrane R protein RD11_RS08735 IPR006304 Type III secretion protein SpaR/YscT RD11_RS08740 IPR006135 Type III secretion system substrate exporter RD11_RS08740 IPR006307 Type III exporter system, secretion apparatus protein BsaZ RD11_RS08740 IPR029025 Type III secretion system substrate exporter, C-terminal RD11_RS08745 IPR010261 Tir chaperone protein (CesT) family RD11_RS08750 IPR003522 Type III secretion system outer membrane pore YscC/HrcC RD11_RS08750 IPR004846 Type II/III secretion system RD11_RS08750 IPR005644 NolW-like RD11_RS08755 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS08755 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08755 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD11_RS08755 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS08755 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS08755 IPR014284 RNA polymerase sigma-70 like domain RD11_RS08775 IPR007487 ABC transporter, substrate-binding protein RD11_RS08780 IPR001932 Protein phosphatase 2C (PP2C)-like domain RD11_RS08780 IPR003660 HAMP linker domain RD11_RS08780 IPR004010 Cache domain RD11_RS08780 IPR033480 RD11_RS08780 RD11_RS08785 IPR011701 Major facilitator superfamily RD11_RS08785 IPR020846 Major facilitator superfamily domain RD11_RS08790 IPR000821 Alanine racemase RD11_RS08790 IPR001608 Alanine racemase, N-terminal RD11_RS08790 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD11_RS08790 IPR011079 Alanine racemase, C-terminal RD11_RS08790 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RD11_RS08790 IPR029066 PLP-binding barrel RD11_RS08795 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS08800 IPR002645 STAS domain RD11_RS08800 IPR003658 Anti-sigma factor antagonist RD11_RS08805 IPR001736 Phospholipase D/Transphosphatidylase RD11_RS08805 IPR025202 Phospholipase D-like domain RD11_RS08805 IPR027379 Cardiolipin synthase N-terminal RD11_RS08815 IPR004899 Pertactin, central region RD11_RS08815 IPR005546 Autotransporter beta-domain RD11_RS08815 IPR006315 Outer membrane autotransporter barrel RD11_RS08815 IPR011050 Pectin lyase fold/virulence factor RD11_RS08815 IPR012332 P22 tailspike C-terminal domain-like RD11_RS08815 IPR013425 Autotransporter-associated beta strand repeat RD11_RS08815 IPR030895 RD11_RS08815 RD11_RS08825 IPR001584 Integrase, catalytic core RD11_RS08825 IPR009057 Homeodomain-like RD11_RS08825 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08825 IPR012337 Ribonuclease H-like domain RD11_RS08825 IPR024967 DNA-binding domain, IS481-type RD11_RS08830 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS08830 IPR011853 TRAP transporter, 4TM/12TM fusion protein RD11_RS08830 IPR021814 Protein of unknown function DUF3394 RD11_RS08835 IPR011852 TRAP transporter solute receptor, TAXI family RD11_RS08840 IPR005814 Aminotransferase class-III RD11_RS08840 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS08840 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS08840 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS08845 IPR000281 Helix-turn-helix protein RpiR RD11_RS08845 IPR001347 Sugar isomerase (SIS) RD11_RS08845 IPR009057 Homeodomain-like RD11_RS08845 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08850 IPR000835 MarR-type HTH domain RD11_RS08850 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08850 IPR023187 Transcriptional regulator MarR-type, conserved site RD11_RS08855 IPR000182 GNAT domain RD11_RS08855 IPR012772 L-2,4-diaminobutyric acid acetyltransferase RD11_RS08855 IPR016181 Acyl-CoA N-acyltransferase RD11_RS08860 IPR001584 Integrase, catalytic core RD11_RS08860 IPR009057 Homeodomain-like RD11_RS08860 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08860 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS08860 IPR012337 Ribonuclease H-like domain RD11_RS08860 IPR024967 DNA-binding domain, IS481-type RD11_RS08865 IPR000640 Translation elongation factor EFG, V domain RD11_RS08865 IPR001498 Impact, N-terminal RD11_RS08865 IPR009022 Elongation factor G, III-V domain RD11_RS08865 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RD11_RS08865 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS08865 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RD11_RS08865 IPR023582 Impact family RD11_RS08870 IPR005746 Thioredoxin RD11_RS08870 IPR012336 Thioredoxin-like fold RD11_RS08870 IPR013766 Thioredoxin domain RD11_RS08870 IPR017937 Thioredoxin, conserved site RD11_RS08880 IPR006043 Xanthine/uracil/vitamin C permease RD11_RS08880 IPR026033 Purine permease PbuG-like RD11_RS08880 IPR029940 RD11_RS08880 RD11_RS08885 IPR000905 Gcp-like domain RD11_RS08885 IPR017861 Kae1/YgjD family RD11_RS08885 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RD11_RS08890 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS08890 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS08895 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY RD11_RS08900 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RD11_RS08900 IPR030048 RD11_RS08900 RD11_RS08905 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RD11_RS08905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS08910 IPR011055 Duplicated hybrid motif RD11_RS08910 IPR016047 Peptidase M23 RD11_RS08910 IPR018392 LysM domain RD11_RS08915 IPR012337 Ribonuclease H-like domain RD11_RS08915 IPR019288 Predicted 3'-5' exonuclease, PolB-like RD11_RS08925 IPR010239 Conserved hypothetical protein CHP02001 RD11_RS08930 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD RD11_RS08930 IPR010280 (Uracil-5)-methyltransferase family RD11_RS08930 IPR012340 Nucleic acid-binding, OB-fold RD11_RS08930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS08930 IPR030390 RD11_RS08930 RD11_RS08930 IPR030391 RD11_RS08930 RD11_RS08935 IPR000551 MerR-type HTH domain RD11_RS08935 IPR009061 DNA binding domain, putative RD11_RS08935 IPR011789 Cu(I)-responsive transcriptional regulator RD11_RS08935 IPR015358 Transcription regulator MerR, DNA binding RD11_RS08940 IPR006121 Heavy metal-associated domain, HMA RD11_RS08940 IPR017969 Heavy-metal-associated, conserved site RD11_RS08945 IPR002109 Glutaredoxin RD11_RS08945 IPR011767 Glutaredoxin active site RD11_RS08945 IPR011906 Glutaredoxin domain RD11_RS08945 IPR012336 Thioredoxin-like fold RD11_RS08945 IPR013740 Redoxin RD11_RS08945 IPR014025 Glutaredoxin subgroup RD11_RS08950 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD11_RS08950 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD11_RS08950 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS08955 IPR007473 Ribosomal RNA large subunit methyltransferase J RD11_RS08955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS08960 IPR004129 Glycerophosphoryl diester phosphodiesterase RD11_RS08960 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain RD11_RS08960 IPR030395 RD11_RS08960 RD11_RS08965 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RD11_RS08965 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RD11_RS08965 IPR027304 Trigger factor/SurA domain RD11_RS08970 IPR013830 RD11_RS08970 RD11_RS08975 IPR003439 ABC transporter-like RD11_RS08975 IPR017871 ABC transporter, conserved site RD11_RS08975 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS08980 IPR001584 Integrase, catalytic core RD11_RS08980 IPR009057 Homeodomain-like RD11_RS08980 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08980 IPR012337 Ribonuclease H-like domain RD11_RS08980 IPR024967 DNA-binding domain, IS481-type RD11_RS08985 IPR001584 Integrase, catalytic core RD11_RS08985 IPR009057 Homeodomain-like RD11_RS08985 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS08985 IPR012337 Ribonuclease H-like domain RD11_RS08985 IPR024967 DNA-binding domain, IS481-type RD11_RS08990 IPR007055 BON domain RD11_RS08990 IPR014004 Transport-associated and nodulation domain, bacteria RD11_RS08995 IPR009760 Protein of unknown function DUF1328 RD11_RS09000 IPR008462 CsbD-like RD11_RS09000 IPR026042 Stress response protein YjbJ RD11_RS09005 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD11_RS09005 IPR004101 Mur ligase, C-terminal RD11_RS09005 IPR011810 Cyanophycin synthetase RD11_RS09005 IPR013221 Mur ligase, central RD11_RS09005 IPR013651 ATP-grasp fold, RimK-type RD11_RS09005 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS09005 IPR018109 Folylpolyglutamate synthetase, conserved site RD11_RS09010 IPR004101 Mur ligase, C-terminal RD11_RS09010 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD11_RS09010 IPR011810 Cyanophycin synthetase RD11_RS09010 IPR013221 Mur ligase, central RD11_RS09010 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS09020 IPR015005 Domain of unknown function DUF1854 RD11_RS09025 IPR007434 Protein of unknown function DUF482 RD11_RS09025 IPR016181 Acyl-CoA N-acyltransferase RD11_RS09030 IPR007402 Protein of unknown function DUF455 RD11_RS09030 IPR009078 Ferritin-like superfamily RD11_RS09030 IPR011197 Uncharacterised conserved protein UCP012318 RD11_RS09035 IPR002477 Peptidoglycan binding-like RD11_RS09035 IPR011757 Lytic transglycosylase MltB RD11_RS09035 IPR011970 Lytic murein transglycosylase RD11_RS09035 IPR023346 Lysozyme-like domain RD11_RS09035 IPR031304 RD11_RS09035 RD11_RS09040 IPR009282 Protein of unknown function DUF937 RD11_RS09040 IPR027405 YidB-like RD11_RS09045 IPR001584 Integrase, catalytic core RD11_RS09045 IPR009057 Homeodomain-like RD11_RS09045 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09045 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09045 IPR012337 Ribonuclease H-like domain RD11_RS09045 IPR024967 DNA-binding domain, IS481-type RD11_RS09050 IPR000485 AsnC-type HTH domain RD11_RS09050 IPR011008 Dimeric alpha-beta barrel RD11_RS09050 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09050 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS09050 IPR019888 Transcription regulator AsnC-type RD11_RS09060 IPR003382 Flavoprotein RD11_RS09060 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RD11_RS09060 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RD11_RS09065 IPR001872 Peptidase A8, signal peptidase II RD11_RS09070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD11_RS09070 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD11_RS09070 IPR002301 Isoleucine-tRNA ligase RD11_RS09070 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD11_RS09070 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD11_RS09070 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RD11_RS09070 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD11_RS09070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS09070 IPR023585 Isoleucine-tRNA ligase, type 1 RD11_RS09075 IPR002606 Riboflavin kinase, bacterial RD11_RS09075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS09075 IPR015864 FAD synthetase RD11_RS09075 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RD11_RS09075 IPR023465 Riboflavin kinase domain RD11_RS09075 IPR023468 Riboflavin kinase RD11_RS09080 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p RD11_RS09080 IPR023267 RNA (C5-cytosine) methyltransferase RD11_RS09080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS09085 IPR001584 Integrase, catalytic core RD11_RS09085 IPR009057 Homeodomain-like RD11_RS09085 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09085 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09085 IPR012337 Ribonuclease H-like domain RD11_RS09085 IPR024967 DNA-binding domain, IS481-type RD11_RS09095 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 RD11_RS09095 IPR005804 Fatty acid desaturase, type 1 RD11_RS09100 IPR000212 DNA helicase, UvrD/REP type RD11_RS09100 IPR013986 DExx box DNA helicase domain RD11_RS09100 IPR014016 UvrD-like Helicase, ATP-binding domain RD11_RS09100 IPR014017 DNA helicase, UvrD-like, C-terminal RD11_RS09100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09105 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS09105 IPR011662 Secretin/TonB, short N-terminal RD11_RS09105 IPR012910 TonB-dependent receptor, plug RD11_RS09110 IPR003439 ABC transporter-like RD11_RS09110 IPR003593 AAA+ ATPase domain RD11_RS09110 IPR017871 ABC transporter, conserved site RD11_RS09110 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09110 IPR032781 RD11_RS09110 RD11_RS09115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD11_RS09115 IPR004556 Modification methylase HemK RD11_RS09115 IPR007848 Methyltransferase small domain RD11_RS09115 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase RD11_RS09115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS09120 IPR002933 Peptidase M20 RD11_RS09120 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RD11_RS09120 IPR011650 Peptidase M20, dimerisation domain RD11_RS09125 IPR001451 Bacterial transferase hexapeptide repeat RD11_RS09125 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family RD11_RS09125 IPR011004 Trimeric LpxA-like RD11_RS09125 IPR018357 Hexapeptide transferase, conserved site RD11_RS09125 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 RD11_RS09140 IPR025421 Protein of unknown function DUF4148 RD11_RS09145 IPR003991 Pertactin virulence factor family RD11_RS09145 IPR005546 Autotransporter beta-domain RD11_RS09145 IPR006315 Outer membrane autotransporter barrel RD11_RS09160 IPR002059 Cold-shock protein, DNA-binding RD11_RS09160 IPR011129 Cold shock protein RD11_RS09160 IPR012156 Cold shock, CspA RD11_RS09160 IPR012340 Nucleic acid-binding, OB-fold RD11_RS09160 IPR019844 Cold-shock conserved site RD11_RS09165 IPR010323 Protein of unknown function DUF924 RD11_RS09165 IPR011990 Tetratricopeptide-like helical domain RD11_RS09170 IPR002059 Cold-shock protein, DNA-binding RD11_RS09170 IPR011129 Cold shock protein RD11_RS09170 IPR012156 Cold shock, CspA RD11_RS09170 IPR012340 Nucleic acid-binding, OB-fold RD11_RS09170 IPR019844 Cold-shock conserved site RD11_RS09175 IPR005134 Uncharacterised protein family UPF0114 RD11_RS09175 IPR020761 Uncharacterised protein family UPF0114, bacteria RD11_RS09175 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria RD11_RS09180 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain RD11_RS09180 IPR005215 Trigger factor RD11_RS09180 IPR008880 Trigger factor, C-terminal domain RD11_RS09180 IPR008881 Trigger factor, ribosome-binding, bacterial RD11_RS09180 IPR027304 Trigger factor/SurA domain RD11_RS09185 IPR001907 ATP-dependent Clp protease proteolytic subunit RD11_RS09185 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RD11_RS09185 IPR029045 ClpP/crotonase-like domain RD11_RS09185 IPR033135 RD11_RS09185 RD11_RS09190 IPR003593 AAA+ ATPase domain RD11_RS09190 IPR003959 ATPase, AAA-type, core RD11_RS09190 IPR004487 Clp protease, ATP-binding subunit ClpX RD11_RS09190 IPR010603 Zinc finger, ClpX C4-type RD11_RS09190 IPR019489 Clp ATPase, C-terminal RD11_RS09190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09195 IPR003111 Peptidase S16, lon N-terminal RD11_RS09195 IPR003593 AAA+ ATPase domain RD11_RS09195 IPR003959 ATPase, AAA-type, core RD11_RS09195 IPR004815 Lon protease, bacterial/eukaryotic-type RD11_RS09195 IPR008268 Peptidase S16, active site RD11_RS09195 IPR008269 Peptidase S16, Lon C-terminal RD11_RS09195 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS09195 IPR015947 PUA-like domain RD11_RS09195 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS09195 IPR027065 Lon protease RD11_RS09195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09195 IPR027543 Lon protease, bacterial RD11_RS09200 IPR000847 Transcription regulator HTH, LysR RD11_RS09200 IPR005119 LysR, substrate-binding RD11_RS09200 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09205 IPR003673 CoA-transferase family III RD11_RS09205 IPR023606 CoA-transferase family III domain RD11_RS09210 IPR005064 Bordetella uptake gene RD11_RS09215 IPR002539 MaoC-like domain RD11_RS09215 IPR029069 HotDog domain RD11_RS09220 IPR001753 Crotonase superfamily RD11_RS09220 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS09220 IPR029045 ClpP/crotonase-like domain RD11_RS09225 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD11_RS09225 IPR012340 Nucleic acid-binding, OB-fold RD11_RS09225 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD11_RS09230 IPR002155 Thiolase RD11_RS09230 IPR016039 Thiolase-like RD11_RS09230 IPR020617 Thiolase, C-terminal RD11_RS09235 IPR002347 Glucose/ribitol dehydrogenase RD11_RS09235 IPR016040 NAD(P)-binding domain RD11_RS09235 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS09240 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS09240 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS09240 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS09240 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS09250 IPR004165 Coenzyme A transferase family I RD11_RS09250 IPR012792 3-oxoacid CoA-transferase, subunit A RD11_RS09255 IPR004164 Coenzyme A transferase active site RD11_RS09255 IPR004165 Coenzyme A transferase family I RD11_RS09255 IPR012791 3-oxoacid CoA-transferase, subunit B RD11_RS09260 IPR005064 Bordetella uptake gene RD11_RS09265 IPR005064 Bordetella uptake gene RD11_RS09270 IPR001584 Integrase, catalytic core RD11_RS09270 IPR009057 Homeodomain-like RD11_RS09270 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09270 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09270 IPR012337 Ribonuclease H-like domain RD11_RS09270 IPR024967 DNA-binding domain, IS481-type RD11_RS09280 IPR003991 Pertactin virulence factor family RD11_RS09280 IPR005546 Autotransporter beta-domain RD11_RS09280 IPR006315 Outer membrane autotransporter barrel RD11_RS09285 IPR006197 Peptidase S24, LexA-like RD11_RS09285 IPR006199 LexA repressor, DNA-binding domain RD11_RS09285 IPR006200 LexA repressor RD11_RS09285 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09285 IPR015927 Peptidase S24/S26A/S26B/S26C RD11_RS09285 IPR019759 Peptidase S24/S26A/S26B RD11_RS09285 IPR028360 Peptidase S24/S26, beta-ribbon domain RD11_RS09290 IPR000796 Aspartate/other aminotransferase RD11_RS09290 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RD11_RS09290 IPR004839 Aminotransferase, class I/classII RD11_RS09290 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS09290 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS09295 IPR001650 Helicase, C-terminal RD11_RS09295 IPR001943 UVR domain RD11_RS09295 IPR004807 UvrABC system, subunit B RD11_RS09295 IPR006935 Helicase/UvrB domain RD11_RS09295 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS09295 IPR024759 UvrB, YAD/RRR-motif-containing domain RD11_RS09295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09300 IPR017867 Protein-tyrosine phosphatase, low molecular weight RD11_RS09300 IPR023485 Phosphotyrosine protein phosphatase I superfamily RD11_RS09305 IPR000944 Transcription regulator Rrf2-like RD11_RS09305 IPR010242 Transcription factor HTH, IscR RD11_RS09305 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09310 IPR000192 Aminotransferase class V domain RD11_RS09310 IPR010240 Cysteine desulfurase RD11_RS09310 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS09310 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS09310 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS09310 IPR016454 Cysteine desulfurase, NifS RD11_RS09310 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RD11_RS09315 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RD11_RS09315 IPR011339 ISC system FeS cluster assembly, IscU scaffold RD11_RS09320 IPR000361 FeS cluster biogenesis RD11_RS09320 IPR011302 ISC system FeS cluster assembly, IscA scaffold RD11_RS09320 IPR016092 FeS cluster insertion protein RD11_RS09320 IPR017870 FeS cluster insertion, C-terminal, conserved site RD11_RS09320 IPR031108 RD11_RS09320 RD11_RS09325 IPR001623 DnaJ domain RD11_RS09325 IPR004640 Co-chaperone Hsc20 RD11_RS09325 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain RD11_RS09330 IPR010236 ISC system FeS cluster assembly, HscA chaperone RD11_RS09330 IPR013126 Heat shock protein 70 family RD11_RS09330 IPR018181 Heat shock protein 70, conserved site RD11_RS09330 IPR029047 Heat shock protein 70kD, peptide-binding domain RD11_RS09330 IPR029048 Heat shock protein 70kD, C-terminal domain RD11_RS09335 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS09335 IPR001055 Adrenodoxin RD11_RS09335 IPR011536 Ferredoxin, 2Fe-2S type RD11_RS09335 IPR012675 Beta-grasp domain RD11_RS09335 IPR018298 Adrenodoxin, iron-sulphur binding site RD11_RS09340 IPR007479 ISC system FeS cluster assembly, IscX RD11_RS09345 IPR011607 Methylglyoxal synthase-like domain RD11_RS09345 IPR018148 Methylglyoxal synthase, active site RD11_RS09350 IPR001584 Integrase, catalytic core RD11_RS09350 IPR009057 Homeodomain-like RD11_RS09350 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09350 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09350 IPR012337 Ribonuclease H-like domain RD11_RS09350 IPR024967 DNA-binding domain, IS481-type RD11_RS09355 IPR001753 Crotonase superfamily RD11_RS09355 IPR014748 Crontonase, C-terminal RD11_RS09355 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS09355 IPR029045 ClpP/crotonase-like domain RD11_RS09360 IPR001584 Integrase, catalytic core RD11_RS09360 IPR009057 Homeodomain-like RD11_RS09360 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09360 IPR012337 Ribonuclease H-like domain RD11_RS09360 IPR024967 DNA-binding domain, IS481-type RD11_RS09365 IPR004684 2-keto-3-deoxygluconate permease RD11_RS09370 IPR010737 Protein of unknown function, DUF1537 RD11_RS09370 IPR031475 RD11_RS09370 RD11_RS09375 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA RD11_RS09375 IPR024084 Isopropylmalate dehydrogenase-like domain RD11_RS09380 IPR000524 Transcription regulator HTH, GntR RD11_RS09380 IPR011663 UbiC transcription regulator-associated RD11_RS09380 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09380 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS09385 IPR005302 Molybdenum cofactor sulfurase, C-terminal RD11_RS09385 IPR005303 MOSC, N-terminal beta barrel RD11_RS09385 IPR011037 Pyruvate kinase-like, insert domain RD11_RS09390 IPR003190 Aspartate decarboxylase RD11_RS09390 IPR009010 Aspartate decarboxylase-like domain RD11_RS09395 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS09395 IPR001221 Phenol hydroxylase reductase RD11_RS09395 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS09395 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD11_RS09395 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS09395 IPR008333 Oxidoreductase, FAD-binding domain RD11_RS09395 IPR012675 Beta-grasp domain RD11_RS09395 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS09400 IPR006076 FAD dependent oxidoreductase RD11_RS09400 IPR016040 NAD(P)-binding domain RD11_RS09400 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS09410 IPR000847 Transcription regulator HTH, LysR RD11_RS09410 IPR005119 LysR, substrate-binding RD11_RS09410 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09415 IPR010839 Protein of unknown function DUF1446 RD11_RS09425 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS09425 IPR030678 RD11_RS09425 RD11_RS09430 IPR000515 MetI-like domain RD11_RS09435 IPR000515 MetI-like domain RD11_RS09435 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD11_RS09440 IPR003439 ABC transporter-like RD11_RS09440 IPR003593 AAA+ ATPase domain RD11_RS09440 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS09440 IPR017871 ABC transporter, conserved site RD11_RS09440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09445 IPR000120 Amidase RD11_RS09445 IPR020556 Amidase, conserved site RD11_RS09445 IPR023631 Amidase signature domain RD11_RS09460 IPR009663 Pilin accessory predicted RD11_RS09470 IPR001482 Type II secretion system protein E RD11_RS09470 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09480 IPR012902 Prokaryotic N-terminal methylation site RD11_RS09480 IPR014911 Type 4 secretion system, PilS, N-terminal RD11_RS09490 IPR002318 Alanine-tRNA ligase, class IIc RD11_RS09490 IPR003156 DHHA1 domain RD11_RS09490 IPR009000 Translation protein, beta-barrel domain RD11_RS09490 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RD11_RS09490 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain RD11_RS09490 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RD11_RS09490 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RD11_RS09490 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RD11_RS09495 IPR001455 TusA-like domain RD11_RS09505 IPR000307 Ribosomal protein S16 RD11_RS09505 IPR023803 Ribosomal protein S16 domain RD11_RS09510 IPR002676 RimM protein RD11_RS09510 IPR009000 Translation protein, beta-barrel domain RD11_RS09510 IPR011033 PRC-barrel-like RD11_RS09510 IPR011961 16S rRNA processing protein RimM RD11_RS09515 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RD11_RS09515 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RD11_RS09515 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RD11_RS09515 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD11_RS09515 IPR029028 Alpha/beta knot methyltransferases RD11_RS09520 IPR000192 Aminotransferase class V domain RD11_RS09520 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS09520 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS09520 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS09520 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site RD11_RS09525 IPR006175 YjgF/Yer057p/UK114 family RD11_RS09525 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS09530 IPR001584 Integrase, catalytic core RD11_RS09530 IPR009057 Homeodomain-like RD11_RS09530 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09530 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09530 IPR012337 Ribonuclease H-like domain RD11_RS09530 IPR024967 DNA-binding domain, IS481-type RD11_RS09535 IPR001584 Integrase, catalytic core RD11_RS09535 IPR009057 Homeodomain-like RD11_RS09535 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09535 IPR012337 Ribonuclease H-like domain RD11_RS09535 IPR024967 DNA-binding domain, IS481-type RD11_RS09540 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS09540 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS09540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS09545 IPR001789 Signal transduction response regulator, receiver domain RD11_RS09545 IPR011006 CheY-like superfamily RD11_RS09550 IPR010583 MltA-interacting MipA RD11_RS09555 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD11_RS09555 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD11_RS09555 IPR002303 Valine-tRNA ligase RD11_RS09555 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD11_RS09555 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD11_RS09555 IPR010978 tRNA-binding arm RD11_RS09555 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD11_RS09555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS09555 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RD11_RS09560 IPR001564 Nucleoside diphosphate kinase RD11_RS09560 IPR023005 Nucleoside diphosphate kinase, active site RD11_RS09565 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RD11_RS09565 IPR007197 Radical SAM RD11_RS09565 IPR013785 Aldolase-type TIM barrel RD11_RS09565 IPR027492 Dual-specificity RNA methyltransferase RlmN RD11_RS09570 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09575 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type RD11_RS09575 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial RD11_RS09580 IPR004154 Anticodon-binding RD11_RS09580 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RD11_RS09580 IPR015807 Histidine-tRNA ligase RD11_RS09585 IPR011990 Tetratricopeptide-like helical domain RD11_RS09585 IPR018704 Domain of unknown function DUF09976 RD11_RS09585 IPR026039 Uncharacterised protein family UPF0070 RD11_RS09590 IPR002372 Pyrrolo-quinoline quinone repeat RD11_RS09590 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily RD11_RS09590 IPR017687 Outer membrane protein assembly factor BamB RD11_RS09590 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RD11_RS09590 IPR027295 Quinonprotein alcohol dehydrogenase-like domain RD11_RS09595 IPR003593 AAA+ ATPase domain RD11_RS09595 IPR005225 Small GTP-binding protein domain RD11_RS09595 IPR006073 GTP binding domain RD11_RS09595 IPR015946 K homology domain-like, alpha/beta RD11_RS09595 IPR016484 GTP-binding protein EngA RD11_RS09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09595 IPR032859 RD11_RS09595 RD11_RS09600 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RD11_RS09600 IPR004839 Aminotransferase, class I/classII RD11_RS09600 IPR005861 Histidinol-phosphate aminotransferase family RD11_RS09600 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS09600 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS09600 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS09605 IPR005001 Host factor Hfq RD11_RS09605 IPR010920 Like-Sm (LSM) domain RD11_RS09610 IPR006073 GTP binding domain RD11_RS09610 IPR016496 GTPase HflX RD11_RS09610 IPR025121 GTPase HflX N-terminal domain RD11_RS09610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09610 IPR032305 RD11_RS09610 RD11_RS09615 IPR001107 Band 7 protein RD11_RS09615 IPR001972 Stomatin family RD11_RS09615 IPR010201 HflK RD11_RS09615 IPR020980 Menbrane protein HflK, N-terminal RD11_RS09620 IPR001107 Band 7 protein RD11_RS09620 IPR001972 Stomatin family RD11_RS09620 IPR010200 HflC RD11_RS09625 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RD11_RS09625 IPR004517 ATP phosphoribosyltransferase regulatory subunit RD11_RS09630 IPR001114 Adenylosuccinate synthetase RD11_RS09630 IPR018220 Adenylosuccinate synthase, active site RD11_RS09630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09630 IPR033128 RD11_RS09630 RD11_RS09635 IPR000836 Phosphoribosyltransferase domain RD11_RS09635 IPR029057 Phosphoribosyltransferase-like RD11_RS09640 IPR001911 Ribosomal protein S21 RD11_RS09640 IPR018278 Ribosomal protein S21, conserved site RD11_RS09645 IPR002694 Zinc finger, CHC2-type RD11_RS09645 IPR006171 Toprim domain RD11_RS09645 IPR006295 DNA primase, DnaG RD11_RS09645 IPR013173 DNA primase DnaG, DnaB-binding domain RD11_RS09645 IPR013264 DNA primase, catalytic core, N-terminal RD11_RS09645 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RD11_RS09645 IPR019475 DNA primase, DnaB-helicase binding domain RD11_RS09645 IPR030846 RD11_RS09645 RD11_RS09650 IPR000943 RNA polymerase sigma-70 RD11_RS09650 IPR007127 RNA polymerase sigma factor 70, region 1.1 RD11_RS09650 IPR007624 RNA polymerase sigma-70 region 3 RD11_RS09650 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS09650 IPR007630 RNA polymerase sigma-70 region 4 RD11_RS09650 IPR007631 RNA polymerase sigma factor 70, non-essential domain RD11_RS09650 IPR009042 RNA polymerase sigma-70 region 1.2 RD11_RS09650 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09650 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RD11_RS09650 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS09650 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS09650 IPR014284 RNA polymerase sigma-70 like domain RD11_RS09650 IPR028630 RNA polymerase sigma factor RpoD RD11_RS09665 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09670 IPR001584 Integrase, catalytic core RD11_RS09670 IPR009057 Homeodomain-like RD11_RS09670 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09670 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09670 IPR012337 Ribonuclease H-like domain RD11_RS09670 IPR024967 DNA-binding domain, IS481-type RD11_RS09675 IPR002549 Uncharacterised protein family UPF0118 RD11_RS09680 IPR000412 ABC-2 transporter RD11_RS09680 IPR013525 ABC-2 type transporter RD11_RS09685 IPR003439 ABC transporter-like RD11_RS09685 IPR003593 AAA+ ATPase domain RD11_RS09685 IPR017871 ABC transporter, conserved site RD11_RS09685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09690 IPR016181 Acyl-CoA N-acyltransferase RD11_RS09695 IPR002781 Transmembrane protein TauE like RD11_RS09710 IPR013783 Immunoglobulin-like fold RD11_RS09710 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG RD11_RS09710 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD11_RS09710 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS09710 IPR032879 RD11_RS09710 RD11_RS09715 IPR004678 Cytochrome c oxidase cbb3-type, subunit III RD11_RS09715 IPR009056 Cytochrome c-like domain RD11_RS09715 IPR032858 RD11_RS09715 RD11_RS09725 IPR000883 Cytochrome c oxidase subunit I RD11_RS09725 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RD11_RS09725 IPR009056 Cytochrome c-like domain RD11_RS09735 IPR004714 Cytochrome oxidase maturation protein cbb3-type RD11_RS09740 IPR008250 P-type ATPase, A domain RD11_RS09745 IPR001584 Integrase, catalytic core RD11_RS09745 IPR009057 Homeodomain-like RD11_RS09745 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09745 IPR012337 Ribonuclease H-like domain RD11_RS09745 IPR024967 DNA-binding domain, IS481-type RD11_RS09750 IPR005814 Aminotransferase class-III RD11_RS09750 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RD11_RS09750 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS09750 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS09750 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS09755 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RD11_RS09755 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type RD11_RS09755 IPR004839 Aminotransferase, class I/classII RD11_RS09755 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS09755 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS09755 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS09760 IPR029058 Alpha/Beta hydrolase fold RD11_RS09765 IPR004472 Dethiobiotin synthase BioD RD11_RS09765 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS09770 IPR005538 LrgA/CidA family RD11_RS09775 IPR007300 CidB/LrgB family RD11_RS09780 IPR001584 Integrase, catalytic core RD11_RS09780 IPR009057 Homeodomain-like RD11_RS09780 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09780 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09780 IPR012337 Ribonuclease H-like domain RD11_RS09780 IPR024967 DNA-binding domain, IS481-type RD11_RS09785 IPR002078 RNA polymerase sigma factor 54 interaction domain RD11_RS09785 IPR002197 DNA binding HTH domain, Fis-type RD11_RS09785 IPR003018 GAF domain RD11_RS09785 IPR003593 AAA+ ATPase domain RD11_RS09785 IPR009057 Homeodomain-like RD11_RS09785 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD11_RS09785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09790 IPR015590 Aldehyde dehydrogenase domain RD11_RS09790 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS09790 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS09790 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS09790 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS09790 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD11_RS09795 IPR003680 Flavodoxin-like fold RD11_RS09795 IPR029039 Flavoprotein-like RD11_RS09805 IPR007383 Protein of unknown function DUF445 RD11_RS09805 IPR011989 Armadillo-like helical RD11_RS09805 IPR016024 Armadillo-type fold RD11_RS09810 IPR000847 Transcription regulator HTH, LysR RD11_RS09810 IPR005119 LysR, substrate-binding RD11_RS09810 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09815 IPR003719 Phenazine biosynthesis PhzF protein RD11_RS09820 IPR009874 Protein of unknown function DUF1428 RD11_RS09820 IPR011008 Dimeric alpha-beta barrel RD11_RS09825 IPR002818 ThiJ/PfpI RD11_RS09825 IPR009057 Homeodomain-like RD11_RS09825 IPR018060 DNA binding HTH domain, AraC-type RD11_RS09825 IPR029062 Class I glutamine amidotransferase-like RD11_RS09830 IPR021553 Protein of unknwon function DUF3008 RD11_RS09835 IPR005180 Domain of unknown function DUF302 RD11_RS09840 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS09840 IPR029058 Alpha/Beta hydrolase fold RD11_RS09845 IPR001845 HTH ArsR-type DNA-binding domain RD11_RS09845 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09850 IPR013538 Activator of Hsp90 ATPase homologue 1-like RD11_RS09850 IPR023393 START-like domain RD11_RS09855 IPR001902 Sulphate anion transporter RD11_RS09855 IPR002645 STAS domain RD11_RS09855 IPR011547 Sulphate transporter RD11_RS09860 IPR000524 Transcription regulator HTH, GntR RD11_RS09860 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS09860 IPR011711 GntR, C-terminal RD11_RS09860 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09870 IPR003689 Zinc/iron permease RD11_RS09880 IPR003439 ABC transporter-like RD11_RS09880 IPR003593 AAA+ ATPase domain RD11_RS09880 IPR011527 ABC transporter type 1, transmembrane domain RD11_RS09880 IPR017871 ABC transporter, conserved site RD11_RS09880 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS09885 IPR001584 Integrase, catalytic core RD11_RS09885 IPR009057 Homeodomain-like RD11_RS09885 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09885 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09885 IPR012337 Ribonuclease H-like domain RD11_RS09885 IPR024967 DNA-binding domain, IS481-type RD11_RS09890 IPR000182 GNAT domain RD11_RS09890 IPR016181 Acyl-CoA N-acyltransferase RD11_RS09895 IPR001584 Integrase, catalytic core RD11_RS09895 IPR009057 Homeodomain-like RD11_RS09895 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09895 IPR012337 Ribonuclease H-like domain RD11_RS09895 IPR024967 DNA-binding domain, IS481-type RD11_RS09900 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD11_RS09900 IPR011057 Mss4-like RD11_RS09905 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD11_RS09905 IPR011701 Major facilitator superfamily RD11_RS09905 IPR020846 Major facilitator superfamily domain RD11_RS09910 IPR028973 3-demethylubiquinone-9 3-methyltransferase RD11_RS09910 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS09915 IPR003111 Peptidase S16, lon N-terminal RD11_RS09915 IPR015947 PUA-like domain RD11_RS09925 IPR009057 Homeodomain-like RD11_RS09925 IPR009594 Transcription regulator HTH, AraC, N-terminal RD11_RS09925 IPR018060 DNA binding HTH domain, AraC-type RD11_RS09930 IPR003777 XdhC- CoxI RD11_RS09930 IPR016185 Pre-ATP-grasp domain RD11_RS09930 IPR027051 XdhC Rossmann domain RD11_RS09935 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD11_RS09935 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD11_RS09935 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RD11_RS09940 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS09940 IPR002888 [2Fe-2S]-binding RD11_RS09940 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS09940 IPR012675 Beta-grasp domain RD11_RS09945 IPR021719 Proteinase inhibitor I78 RD11_RS09950 IPR000847 Transcription regulator HTH, LysR RD11_RS09950 IPR005119 LysR, substrate-binding RD11_RS09950 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09955 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD11_RS09955 IPR012349 FMN-binding split barrel RD11_RS09965 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD11_RS09970 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS09970 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS09975 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD11_RS09975 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RD11_RS09975 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD11_RS09975 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS09985 IPR001584 Integrase, catalytic core RD11_RS09985 IPR009057 Homeodomain-like RD11_RS09985 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09985 IPR012337 Ribonuclease H-like domain RD11_RS09985 IPR024967 DNA-binding domain, IS481-type RD11_RS09990 IPR001584 Integrase, catalytic core RD11_RS09990 IPR009057 Homeodomain-like RD11_RS09990 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS09990 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS09990 IPR012337 Ribonuclease H-like domain RD11_RS09990 IPR024967 DNA-binding domain, IS481-type RD11_RS10000 IPR005064 Bordetella uptake gene RD11_RS10005 IPR002509 Polysaccharide deacetylase RD11_RS10005 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD11_RS10010 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS10010 IPR029058 Alpha/Beta hydrolase fold RD11_RS10015 IPR000120 Amidase RD11_RS10015 IPR023631 Amidase signature domain RD11_RS10020 IPR000120 Amidase RD11_RS10020 IPR023631 Amidase signature domain RD11_RS10025 IPR002347 Glucose/ribitol dehydrogenase RD11_RS10025 IPR016040 NAD(P)-binding domain RD11_RS10025 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS10035 IPR009197 Microcystin LR degradation protein MlrC RD11_RS10035 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD11_RS10035 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD11_RS10040 IPR004808 AP endonuclease 1 RD11_RS10040 IPR005135 Endonuclease/exonuclease/phosphatase RD11_RS10040 IPR020848 AP endonuclease 1, conserved site RD11_RS10045 IPR007418 Protein of unknown function DUF474 RD11_RS10050 IPR010266 NnrS RD11_RS10055 IPR001486 Globin, truncated bacterial-like RD11_RS10055 IPR009050 Globin-like RD11_RS10055 IPR012292 Globin, structural domain RD11_RS10060 IPR011893 Selenoprotein, Rdx type RD11_RS10060 IPR012336 Thioredoxin-like fold RD11_RS10065 IPR001584 Integrase, catalytic core RD11_RS10065 IPR009057 Homeodomain-like RD11_RS10065 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10065 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10065 IPR012337 Ribonuclease H-like domain RD11_RS10065 IPR024967 DNA-binding domain, IS481-type RD11_RS10070 IPR001584 Integrase, catalytic core RD11_RS10070 IPR009057 Homeodomain-like RD11_RS10070 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10070 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10070 IPR012337 Ribonuclease H-like domain RD11_RS10070 IPR024967 DNA-binding domain, IS481-type RD11_RS10075 IPR005064 Bordetella uptake gene RD11_RS10080 IPR000847 Transcription regulator HTH, LysR RD11_RS10080 IPR005119 LysR, substrate-binding RD11_RS10080 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10085 IPR016195 Polymerase/histidinol phosphatase-like RD11_RS10085 IPR022028 Protein of unknown function DUF3604 RD11_RS10090 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD11_RS10090 IPR012340 Nucleic acid-binding, OB-fold RD11_RS10090 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD11_RS10090 IPR016039 Thiolase-like RD11_RS10095 IPR002155 Thiolase RD11_RS10095 IPR016039 Thiolase-like RD11_RS10095 IPR020616 Thiolase, N-terminal RD11_RS10095 IPR020617 Thiolase, C-terminal RD11_RS10100 IPR000873 AMP-dependent synthetase/ligase RD11_RS10100 IPR028154 AMP-dependent ligase, C-terminal RD11_RS10105 IPR013094 Alpha/beta hydrolase fold-3 RD11_RS10105 IPR029058 Alpha/Beta hydrolase fold RD11_RS10110 IPR003673 CoA-transferase family III RD11_RS10110 IPR023606 CoA-transferase family III domain RD11_RS10115 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS10115 IPR001055 Adrenodoxin RD11_RS10115 IPR012675 Beta-grasp domain RD11_RS10115 IPR018298 Adrenodoxin, iron-sulphur binding site RD11_RS10120 IPR002347 Glucose/ribitol dehydrogenase RD11_RS10120 IPR016040 NAD(P)-binding domain RD11_RS10120 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS10125 IPR001753 Crotonase superfamily RD11_RS10125 IPR029045 ClpP/crotonase-like domain RD11_RS10130 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit RD11_RS10130 IPR032710 RD11_RS10130 RD11_RS10135 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RD11_RS10135 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD11_RS10135 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD11_RS10135 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS10140 IPR028081 Leucine-binding protein domain RD11_RS10140 IPR028082 Periplasmic binding protein-like I RD11_RS10145 IPR001851 ABC transporter, permease RD11_RS10150 IPR001851 ABC transporter, permease RD11_RS10155 IPR001584 Integrase, catalytic core RD11_RS10155 IPR009057 Homeodomain-like RD11_RS10155 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10155 IPR012337 Ribonuclease H-like domain RD11_RS10155 IPR024967 DNA-binding domain, IS481-type RD11_RS10165 IPR006254 Isocitrate lyase RD11_RS10165 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS10165 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RD11_RS10170 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 RD11_RS10170 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal RD11_RS10170 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RD11_RS10175 IPR020846 Major facilitator superfamily domain RD11_RS10180 IPR011701 Major facilitator superfamily RD11_RS10180 IPR020846 Major facilitator superfamily domain RD11_RS10185 IPR000462 CDP-alcohol phosphatidyltransferase RD11_RS10185 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RD11_RS10190 IPR000305 GIY-YIG nuclease superfamily RD11_RS10190 IPR001162 UvrC family homology region RD11_RS10190 IPR001943 UVR domain RD11_RS10190 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RD11_RS10190 IPR004791 UvrABC system, subunit C RD11_RS10190 IPR010994 RuvA domain 2-like RD11_RS10190 IPR027299 GIY-YIG domain RD11_RS10195 IPR001764 Glycoside hydrolase, family 3, N-terminal RD11_RS10195 IPR017853 Glycoside hydrolase, superfamily RD11_RS10195 IPR019800 Glycoside hydrolase, family 3, active site RD11_RS10195 IPR022956 Beta-hexosaminidase, bacterial RD11_RS10200 IPR002582 Holo-[acyl carrier protein] synthase RD11_RS10200 IPR004568 Phosphopantethiene-protein transferase domain RD11_RS10200 IPR008278 4'-phosphopantetheinyl transferase superfamily RD11_RS10205 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ RD11_RS10205 IPR013785 Aldolase-type TIM barrel RD11_RS10210 IPR003423 Outer membrane efflux protein RD11_RS10215 IPR001036 Acriflavin resistance protein RD11_RS10215 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 RD11_RS10215 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD11_RS10220 IPR006143 RND efflux pump, membrane fusion protein RD11_RS10220 IPR032317 RD11_RS10220 RD11_RS10225 IPR001867 Signal transduction response regulator, C-terminal RD11_RS10225 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10225 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS10230 IPR001227 Acyl transferase domain RD11_RS10230 IPR002641 Patatin/Phospholipase A2-related RD11_RS10230 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RD11_RS10230 IPR021095 Protein of unknown function DUF3734 RD11_RS10235 IPR025411 Domain of unknown function DUF4136 RD11_RS10240 IPR000847 Transcription regulator HTH, LysR RD11_RS10240 IPR003725 Molybdenum-binding protein, N-terminal RD11_RS10240 IPR004606 Molybdenum-pterin binding RD11_RS10240 IPR005116 Transport-associated OB, type 1 RD11_RS10240 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS10240 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10240 IPR016462 Molybdate-dependent transcriptional regulator, ModE RD11_RS10245 IPR003439 ABC transporter-like RD11_RS10245 IPR003593 AAA+ ATPase domain RD11_RS10245 IPR017871 ABC transporter, conserved site RD11_RS10245 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10255 IPR007487 ABC transporter, substrate-binding protein RD11_RS10255 IPR028082 Periplasmic binding protein-like I RD11_RS10260 IPR001424 Superoxide dismutase, copper/zinc binding domain RD11_RS10260 IPR018152 Superoxide dismutase, copper/zinc, binding site RD11_RS10260 IPR024134 RD11_RS10260 RD11_RS10265 IPR005064 Bordetella uptake gene RD11_RS10275 IPR001753 Crotonase superfamily RD11_RS10275 IPR029045 ClpP/crotonase-like domain RD11_RS10280 IPR007956 Malonyl-CoA decarboxylase RD11_RS10285 IPR000524 Transcription regulator HTH, GntR RD11_RS10285 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS10285 IPR011711 GntR, C-terminal RD11_RS10285 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS10295 IPR002155 Thiolase RD11_RS10295 IPR016039 Thiolase-like RD11_RS10295 IPR020610 Thiolase, active site RD11_RS10295 IPR020615 Thiolase, acyl-enzyme intermediate active site RD11_RS10295 IPR020616 Thiolase, N-terminal RD11_RS10295 IPR020617 Thiolase, C-terminal RD11_RS10300 IPR004370 4-oxalocrotonate tautomerase RD11_RS10300 IPR014347 Tautomerase/MIF superfamily RD11_RS10305 IPR003439 ABC transporter-like RD11_RS10305 IPR003593 AAA+ ATPase domain RD11_RS10305 IPR005892 Glycine betaine transport ATP-binding subunit RD11_RS10305 IPR017871 ABC transporter, conserved site RD11_RS10305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10310 IPR000515 MetI-like domain RD11_RS10315 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RD11_RS10320 IPR001584 Integrase, catalytic core RD11_RS10320 IPR009057 Homeodomain-like RD11_RS10320 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10320 IPR012337 Ribonuclease H-like domain RD11_RS10320 IPR024967 DNA-binding domain, IS481-type RD11_RS10325 IPR003333 Mycolic acid cyclopropane synthase RD11_RS10325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS10330 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RD11_RS10330 IPR011701 Major facilitator superfamily RD11_RS10330 IPR020846 Major facilitator superfamily domain RD11_RS10335 IPR001383 Ribosomal protein L28 RD11_RS10335 IPR026569 Ribosomal protein L28/L24 RD11_RS10340 IPR001705 Ribosomal protein L33 RD11_RS10340 IPR011332 Zinc-binding ribosomal protein RD11_RS10345 IPR001902 Sulphate anion transporter RD11_RS10345 IPR002645 STAS domain RD11_RS10345 IPR011547 Sulphate transporter RD11_RS10350 IPR001584 Integrase, catalytic core RD11_RS10350 IPR009057 Homeodomain-like RD11_RS10350 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10350 IPR012337 Ribonuclease H-like domain RD11_RS10350 IPR024967 DNA-binding domain, IS481-type RD11_RS10355 IPR000119 Histone-like bacterial DNA-binding protein RD11_RS10355 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD11_RS10360 IPR000835 MarR-type HTH domain RD11_RS10360 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10365 IPR011701 Major facilitator superfamily RD11_RS10365 IPR020846 Major facilitator superfamily domain RD11_RS10370 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD11_RS10370 IPR002300 Aminoacyl-tRNA synthetase, class Ia RD11_RS10370 IPR002302 Leucine-tRNA ligase RD11_RS10370 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RD11_RS10370 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD11_RS10370 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RD11_RS10370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS10370 IPR015413 Methionyl/Leucyl tRNA synthetase RD11_RS10370 IPR025709 Leucyl-tRNA synthetase, editing domain RD11_RS10375 IPR007485 Lipopolysaccharide assembly, LptE RD11_RS10380 IPR005790 DNA polymerase III, delta subunit RD11_RS10380 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD11_RS10380 IPR010372 DNA polymerase III, delta RD11_RS10380 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10385 IPR000965 Gamma-glutamyl phosphate reductase GPR RD11_RS10385 IPR012134 Glutamate-5-semialdehyde dehydrogenase RD11_RS10385 IPR015590 Aldehyde dehydrogenase domain RD11_RS10385 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS10385 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS10385 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS10385 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site RD11_RS10395 IPR000120 Amidase RD11_RS10395 IPR020556 Amidase, conserved site RD11_RS10395 IPR023631 Amidase signature domain RD11_RS10400 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD11_RS10400 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD11_RS10400 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS10400 IPR016040 NAD(P)-binding domain RD11_RS10405 IPR016181 Acyl-CoA N-acyltransferase RD11_RS10405 IPR031165 RD11_RS10405 RD11_RS10410 IPR023006 Uncharacterised protein family UPF0225 RD11_RS10410 IPR032710 RD11_RS10410 RD11_RS10445 IPR000847 Transcription regulator HTH, LysR RD11_RS10445 IPR005119 LysR, substrate-binding RD11_RS10445 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10455 IPR003702 Acetyl-CoA hydrolase/transferase RD11_RS10455 IPR017821 Succinate CoA transferase RD11_RS10455 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RD11_RS10460 IPR000847 Transcription regulator HTH, LysR RD11_RS10460 IPR005119 LysR, substrate-binding RD11_RS10460 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10465 IPR001584 Integrase, catalytic core RD11_RS10465 IPR009057 Homeodomain-like RD11_RS10465 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10465 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10465 IPR012337 Ribonuclease H-like domain RD11_RS10465 IPR024967 DNA-binding domain, IS481-type RD11_RS10475 IPR002781 Transmembrane protein TauE like RD11_RS10480 IPR000620 Drug/metabolite transporter RD11_RS10485 IPR005545 YCII-related RD11_RS10485 IPR011008 Dimeric alpha-beta barrel RD11_RS10490 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD11_RS10490 IPR011008 Dimeric alpha-beta barrel RD11_RS10495 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 RD11_RS10495 IPR025984 MazG-like domain RD11_RS10500 IPR012337 Ribonuclease H-like domain RD11_RS10500 IPR013520 Exonuclease, RNase T/DNA polymerase III RD11_RS10505 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD11_RS10505 IPR004406 Aconitase B, bacterial RD11_RS10505 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS10505 IPR015929 Aconitase B, N-terminal, bacterial RD11_RS10505 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD11_RS10505 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD11_RS10505 IPR015933 Aconitase B, HEAT-like, bacterial RD11_RS10505 IPR015937 Aconitase/isopropylmalate dehydratase RD11_RS10505 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD11_RS10515 IPR006664 Outer membrane protein, bacterial RD11_RS10515 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD11_RS10520 IPR001584 Integrase, catalytic core RD11_RS10520 IPR009057 Homeodomain-like RD11_RS10520 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10520 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10520 IPR012337 Ribonuclease H-like domain RD11_RS10520 IPR024967 DNA-binding domain, IS481-type RD11_RS10525 IPR006328 Haloacid dehalogenase, type II RD11_RS10525 IPR006439 HAD hydrolase, subfamily IA RD11_RS10525 IPR023214 HAD-like domain RD11_RS10530 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS10530 IPR010105 TonB-dependent siderophore receptor RD11_RS10530 IPR010917 TonB-dependent receptor, conserved site RD11_RS10530 IPR012910 TonB-dependent receptor, plug RD11_RS10530 IPR030149 RD11_RS10530 RD11_RS10535 IPR023346 Lysozyme-like domain RD11_RS10540 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel RD11_RS10540 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha RD11_RS10540 IPR006249 Aconitate/iron regulatory protein 2 RD11_RS10540 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS10540 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RD11_RS10540 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 RD11_RS10540 IPR015937 Aconitase/isopropylmalate dehydratase RD11_RS10540 IPR018136 Aconitase family, 4Fe-4S cluster binding site RD11_RS10545 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RD11_RS10545 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type RD11_RS10550 IPR021292 Protein of unknown function DUF2863 RD11_RS10555 IPR016633 Uncharacterised conserved protein UCP015557 RD11_RS10560 IPR001059 Translation elongation factor P/YeiP, central RD11_RS10560 IPR008991 Translation protein SH3-like domain RD11_RS10560 IPR011768 Translation elongation factor P RD11_RS10560 IPR012340 Nucleic acid-binding, OB-fold RD11_RS10560 IPR013185 Translation elongation factor, KOW-like RD11_RS10560 IPR013852 Translation elongation factor P/YeiP, conserved site RD11_RS10560 IPR014722 Ribosomal protein L2 domain 2 RD11_RS10560 IPR015365 Elongation factor P, C-terminal RD11_RS10560 IPR020599 Translation elongation factor P/YeiP RD11_RS10565 IPR002327 Cytochrome c, class IA/ IB RD11_RS10565 IPR009056 Cytochrome c-like domain RD11_RS10570 IPR009078 Ferritin-like superfamily RD11_RS10570 IPR012347 Ferritin-related RD11_RS10575 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS10575 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10575 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD11_RS10575 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS10575 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS10575 IPR014284 RNA polymerase sigma-70 like domain RD11_RS10580 IPR009562 Protein of unknown function DUF1178 RD11_RS10585 IPR021350 Protein of unknown function DUF2968 RD11_RS10590 IPR002078 RNA polymerase sigma factor 54 interaction domain RD11_RS10590 IPR002197 DNA binding HTH domain, Fis-type RD11_RS10590 IPR003593 AAA+ ATPase domain RD11_RS10590 IPR009057 Homeodomain-like RD11_RS10590 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD11_RS10590 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD11_RS10590 IPR025944 Sigma-54 interaction domain, conserved site RD11_RS10590 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10595 IPR018705 Domain of unknown function DUF2134, membrane RD11_RS10605 IPR011990 Tetratricopeptide-like helical domain RD11_RS10605 IPR016931 Uncharacterised conserved protein UCP029658, TPR RD11_RS10605 IPR019734 Tetratricopeptide repeat RD11_RS10610 IPR018076 Type II secretion system F domain RD11_RS10615 IPR018076 Type II secretion system F domain RD11_RS10620 IPR001482 Type II secretion system protein E RD11_RS10620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10625 IPR011006 CheY-like superfamily RD11_RS10625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10630 IPR001775 GspD/PilQ family RD11_RS10630 IPR004846 Type II/III secretion system RD11_RS10630 IPR032789 RD11_RS10630 RD11_RS10635 IPR013974 SAF domain RD11_RS10635 IPR017592 Pilus assembly, Flp-type CpaB RD11_RS10635 IPR031571 RD11_RS10635 RD11_RS10640 IPR012495 TadE-like RD11_RS10645 IPR012495 TadE-like RD11_RS10650 IPR000045 Prepilin type IV endopeptidase, peptidase domain RD11_RS10655 IPR007047 Flp/Fap pilin component RD11_RS10660 IPR005330 MHYT RD11_RS10665 IPR013686 Polypeptide-transport-associated, ShlB-type RD11_RS10675 IPR001584 Integrase, catalytic core RD11_RS10675 IPR009057 Homeodomain-like RD11_RS10675 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10675 IPR012337 Ribonuclease H-like domain RD11_RS10675 IPR024967 DNA-binding domain, IS481-type RD11_RS10680 IPR000835 MarR-type HTH domain RD11_RS10680 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10685 IPR003439 ABC transporter-like RD11_RS10685 IPR003593 AAA+ ATPase domain RD11_RS10685 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS10685 IPR017871 ABC transporter, conserved site RD11_RS10685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10690 IPR000515 MetI-like domain RD11_RS10695 IPR000515 MetI-like domain RD11_RS10700 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS10705 IPR002071 Thermonuclease active site RD11_RS10705 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RD11_RS10710 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RD11_RS10715 IPR000212 DNA helicase, UvrD/REP type RD11_RS10715 IPR014016 UvrD-like Helicase, ATP-binding domain RD11_RS10715 IPR014017 DNA helicase, UvrD-like, C-terminal RD11_RS10715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10720 IPR002763 Protein of unknown function DUF72 RD11_RS10725 IPR000524 Transcription regulator HTH, GntR RD11_RS10725 IPR004839 Aminotransferase, class I/classII RD11_RS10725 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10725 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS10725 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS10725 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS10730 IPR004632 4-aminobutyrate aminotransferase, bacterial RD11_RS10730 IPR005814 Aminotransferase class-III RD11_RS10730 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS10730 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS10730 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS10735 IPR010102 Succinate semialdehyde dehydrogenase RD11_RS10735 IPR015590 Aldehyde dehydrogenase domain RD11_RS10735 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS10735 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS10735 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS10735 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS10735 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD11_RS10740 IPR000760 Inositol monophosphatase RD11_RS10745 IPR003000 Sirtuin family RD11_RS10745 IPR026587 Sirtuin, class II RD11_RS10745 IPR026591 Sirtuin family, catalytic core small domain RD11_RS10745 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS10750 IPR011701 Major facilitator superfamily RD11_RS10750 IPR020846 Major facilitator superfamily domain RD11_RS10755 IPR001451 Bacterial transferase hexapeptide repeat RD11_RS10755 IPR011004 Trimeric LpxA-like RD11_RS10760 IPR001672 Phosphoglucose isomerase (PGI) RD11_RS10765 IPR005841 Alpha-D-phosphohexomutase superfamily RD11_RS10765 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD11_RS10765 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD11_RS10765 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD11_RS10765 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD11_RS10765 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD11_RS10770 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS10770 IPR011006 CheY-like superfamily RD11_RS10770 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10770 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS10775 IPR001584 Integrase, catalytic core RD11_RS10775 IPR009057 Homeodomain-like RD11_RS10775 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10775 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10775 IPR012337 Ribonuclease H-like domain RD11_RS10775 IPR024967 DNA-binding domain, IS481-type RD11_RS10780 IPR000835 MarR-type HTH domain RD11_RS10780 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10795 IPR011990 Tetratricopeptide-like helical domain RD11_RS10795 IPR019734 Tetratricopeptide repeat RD11_RS10795 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA RD11_RS10800 IPR002509 Polysaccharide deacetylase RD11_RS10800 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD11_RS10800 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB RD11_RS10800 IPR032772 RD11_RS10800 RD11_RS10805 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA RD11_RS10805 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS10815 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD11_RS10815 IPR013785 Aldolase-type TIM barrel RD11_RS10820 IPR001845 HTH ArsR-type DNA-binding domain RD11_RS10820 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10825 IPR029069 HotDog domain RD11_RS10830 IPR002539 MaoC-like domain RD11_RS10830 IPR029069 HotDog domain RD11_RS10835 IPR002539 MaoC-like domain RD11_RS10835 IPR029069 HotDog domain RD11_RS10840 IPR006175 YjgF/Yer057p/UK114 family RD11_RS10840 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS10845 IPR005064 Bordetella uptake gene RD11_RS10850 IPR003781 CoA-binding RD11_RS10850 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS10850 IPR016040 NAD(P)-binding domain RD11_RS10850 IPR016102 Succinyl-CoA synthetase-like RD11_RS10850 IPR032875 RD11_RS10850 RD11_RS10855 IPR005471 Transcription regulator IclR, N-terminal RD11_RS10855 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10855 IPR014757 Transcription regulator IclR, C-terminal RD11_RS10855 IPR029016 GAF domain-like RD11_RS10860 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD11_RS10860 IPR013785 Aldolase-type TIM barrel RD11_RS10870 IPR003439 ABC transporter-like RD11_RS10870 IPR003593 AAA+ ATPase domain RD11_RS10870 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS10870 IPR013611 Transport-associated OB, type 2 RD11_RS10870 IPR017871 ABC transporter, conserved site RD11_RS10870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS10875 IPR000515 MetI-like domain RD11_RS10880 IPR000515 MetI-like domain RD11_RS10885 IPR011059 Metal-dependent hydrolase, composite domain RD11_RS10885 IPR013108 Amidohydrolase 3 RD11_RS10890 IPR011059 Metal-dependent hydrolase, composite domain RD11_RS10890 IPR013108 Amidohydrolase 3 RD11_RS10890 IPR032466 RD11_RS10890 RD11_RS10900 IPR000847 Transcription regulator HTH, LysR RD11_RS10900 IPR005119 LysR, substrate-binding RD11_RS10900 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS10905 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS10905 IPR009057 Homeodomain-like RD11_RS10905 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS10905 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS10910 IPR002347 Glucose/ribitol dehydrogenase RD11_RS10910 IPR016040 NAD(P)-binding domain RD11_RS10910 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS10915 IPR002811 Aspartate dehydrogenase RD11_RS10915 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD11_RS10915 IPR011182 L-aspartate dehydrogenase RD11_RS10915 IPR016040 NAD(P)-binding domain RD11_RS10915 IPR020626 L-aspartate dehydrogenase, prokaryotic RD11_RS10920 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS10920 IPR029058 Alpha/Beta hydrolase fold RD11_RS10925 IPR004682 TRAP dicarboxylate transporter RD11_RS10925 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS10930 IPR004681 TRAP transporter permease protein RD11_RS10930 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS10935 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS10940 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD11_RS10940 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD11_RS10940 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RD11_RS10940 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS10940 IPR013328 Dehydrogenase, multihelical RD11_RS10940 IPR016040 NAD(P)-binding domain RD11_RS10945 IPR011008 Dimeric alpha-beta barrel RD11_RS10945 IPR012577 NIPSNAP RD11_RS10950 IPR011051 RmlC-like cupin domain RD11_RS10950 IPR013096 Cupin 2, conserved barrel RD11_RS10950 IPR014710 RmlC-like jelly roll fold RD11_RS10955 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS10955 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS10965 IPR001048 Aspartate/glutamate/uridylate kinase RD11_RS10965 IPR001057 Glutamate/acetylglutamate kinase RD11_RS10965 IPR001341 Aspartate kinase domain RD11_RS10965 IPR002912 ACT domain RD11_RS10965 IPR005260 Aspartate kinase, monofunctional class RD11_RS10965 IPR018042 Aspartate kinase, conserved site RD11_RS10965 IPR027795 GATS-like ACT domain RD11_RS10970 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RD11_RS10970 IPR012094 Lysidine-tRNA(Ile) synthetase RD11_RS10970 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal RD11_RS10970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS10970 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain RD11_RS10975 IPR001584 Integrase, catalytic core RD11_RS10975 IPR009057 Homeodomain-like RD11_RS10975 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS10975 IPR012337 Ribonuclease H-like domain RD11_RS10975 IPR024967 DNA-binding domain, IS481-type RD11_RS10980 IPR001095 Acetyl-CoA carboxylase, alpha subunit RD11_RS10980 IPR029045 ClpP/crotonase-like domain RD11_RS10985 IPR003265 HhH-GPD domain RD11_RS10985 IPR011257 DNA glycosylase RD11_RS10985 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD11_RS10990 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding RD11_RS10990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS10990 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RD11_RS10990 IPR015803 Cysteine-tRNA ligase RD11_RS10990 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RD11_RS10990 IPR032678 RD11_RS10990 RD11_RS10995 IPR011990 Tetratricopeptide-like helical domain RD11_RS10995 IPR019734 Tetratricopeptide repeat RD11_RS11000 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RD11_RS11000 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RD11_RS11000 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RD11_RS11000 IPR029000 Cyclophilin-like domain RD11_RS11005 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD11_RS11005 IPR010138 UDP-2,3-diacylglucosamine hydrolase RD11_RS11005 IPR029052 Metallo-dependent phosphatase-like RD11_RS11010 IPR003824 Undecaprenyl-diphosphatase UppP RD11_RS11015 IPR000644 CBS domain RD11_RS11015 IPR005170 Transporter-associated domain RD11_RS11015 IPR005496 Integral membrane protein TerC RD11_RS11015 IPR016166 FAD-binding, type 2 RD11_RS11015 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS11020 IPR000760 Inositol monophosphatase RD11_RS11020 IPR020550 Inositol monophosphatase, conserved site RD11_RS11020 IPR020583 Inositol monophosphatase, metal-binding site RD11_RS11020 IPR022337 Inositol monophosphatase, SuhB RD11_RS11025 IPR001537 tRNA/rRNA methyltransferase, SpoU type RD11_RS11025 IPR004384 RNA methyltransferase TrmH, group 1 RD11_RS11025 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RD11_RS11025 IPR029028 Alpha/beta knot methyltransferases RD11_RS11030 IPR005064 Bordetella uptake gene RD11_RS11035 IPR005471 Transcription regulator IclR, N-terminal RD11_RS11035 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11035 IPR014757 Transcription regulator IclR, C-terminal RD11_RS11035 IPR029016 GAF domain-like RD11_RS11040 IPR006685 Mechanosensitive ion channel MscS RD11_RS11040 IPR010920 Like-Sm (LSM) domain RD11_RS11040 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RD11_RS11040 IPR011066 Mechanosensitive ion channel MscS, C-terminal RD11_RS11050 IPR005079 Peptidase C45 RD11_RS11055 IPR002821 Hydantoinase/oxoprolinase RD11_RS11055 IPR003692 Hydantoinase B/oxoprolinase RD11_RS11055 IPR008040 Hydantoinaseoxoprolinase, N-terminal RD11_RS11060 IPR000835 MarR-type HTH domain RD11_RS11060 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11060 IPR014601 Transcriptional regulator with MarR-type HTH domain RD11_RS11065 IPR000847 Transcription regulator HTH, LysR RD11_RS11065 IPR005119 LysR, substrate-binding RD11_RS11065 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11075 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS11080 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS11090 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS11095 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS11105 IPR005565 Haemolysin activator HlyB RD11_RS11105 IPR013686 Polypeptide-transport-associated, ShlB-type RD11_RS11105 IPR027282 Two partner secretion pathway transporter RD11_RS11110 IPR000259 Fimbrial-type adhesion domain RD11_RS11110 IPR008966 Adhesion domain RD11_RS11115 IPR000015 Outer membrane usher protein RD11_RS11115 IPR018030 Fimbrial membrane usher, conserved site RD11_RS11115 IPR025885 PapC, N-terminal domain RD11_RS11115 IPR025949 PapC-like, C-terminal domain RD11_RS11120 IPR001829 Pili assembly chaperone, bacterial RD11_RS11120 IPR008962 PapD-like RD11_RS11120 IPR016147 PapD, N-terminal, bacterial RD11_RS11120 IPR016148 Pili assembly chaperone, C-terminal domain RD11_RS11120 IPR018046 Pili assembly chaperone, conserved site RD11_RS11125 IPR000259 Fimbrial-type adhesion domain RD11_RS11125 IPR008966 Adhesion domain RD11_RS11130 IPR008619 Filamentous haemagglutinin repeat RD11_RS11130 IPR008638 Filamentous haemagglutinin, N-terminal RD11_RS11130 IPR011050 Pectin lyase fold/virulence factor RD11_RS11130 IPR012334 Pectin lyase fold RD11_RS11130 IPR024973 ESPR domain RD11_RS11130 IPR025157 Haemagluttinin repeat RD11_RS11135 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS11135 IPR001789 Signal transduction response regulator, receiver domain RD11_RS11135 IPR011006 CheY-like superfamily RD11_RS11135 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11140 IPR000014 PAS domain RD11_RS11140 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS11140 IPR001789 Signal transduction response regulator, receiver domain RD11_RS11140 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS11140 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS11140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS11140 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RD11_RS11140 IPR011006 CheY-like superfamily RD11_RS11140 IPR013767 PAS fold RD11_RS11145 IPR001633 EAL domain RD11_RS11150 IPR009906 Protein of unknown function DUF1445 RD11_RS11150 IPR016938 Uncharacterised protein family UPF0317 RD11_RS11155 IPR000120 Amidase RD11_RS11155 IPR023631 Amidase signature domain RD11_RS11170 IPR001584 Integrase, catalytic core RD11_RS11170 IPR012337 Ribonuclease H-like domain RD11_RS11175 IPR007438 Protein of unknown function DUF488 RD11_RS11180 IPR001584 Integrase, catalytic core RD11_RS11180 IPR009057 Homeodomain-like RD11_RS11180 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11180 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11180 IPR012337 Ribonuclease H-like domain RD11_RS11180 IPR024967 DNA-binding domain, IS481-type RD11_RS11185 IPR000524 Transcription regulator HTH, GntR RD11_RS11185 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS11185 IPR011711 GntR, C-terminal RD11_RS11185 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11190 IPR004682 TRAP dicarboxylate transporter RD11_RS11190 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS11195 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS11200 IPR004681 TRAP transporter permease protein RD11_RS11200 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS11205 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD11_RS11205 IPR011206 Citrate lyase beta subunit-like RD11_RS11205 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS11210 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS11210 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS11210 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS11210 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS11210 IPR029061 Thiamin diphosphate-binding fold RD11_RS11215 IPR002933 Peptidase M20 RD11_RS11215 IPR010158 Amidase, hydantoinase/carbamoylase RD11_RS11215 IPR011650 Peptidase M20, dimerisation domain RD11_RS11220 IPR015590 Aldehyde dehydrogenase domain RD11_RS11220 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS11220 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS11220 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS11220 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS11220 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD11_RS11225 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RD11_RS11225 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RD11_RS11225 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RD11_RS11225 IPR014362 Glutamate dehydrogenase RD11_RS11225 IPR016040 NAD(P)-binding domain RD11_RS11230 IPR023696 Ureohydrolase domain RD11_RS11235 IPR003439 ABC transporter-like RD11_RS11235 IPR003593 AAA+ ATPase domain RD11_RS11235 IPR017871 ABC transporter, conserved site RD11_RS11235 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11235 IPR030679 RD11_RS11235 RD11_RS11245 IPR001320 Ionotropic glutamate receptor RD11_RS11245 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS11245 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD11_RS11250 IPR005471 Transcription regulator IclR, N-terminal RD11_RS11250 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11250 IPR014757 Transcription regulator IclR, C-terminal RD11_RS11250 IPR029016 GAF domain-like RD11_RS11255 IPR002110 Ankyrin repeat RD11_RS11255 IPR020683 Ankyrin repeat-containing domain RD11_RS11260 IPR001130 TatD family RD11_RS11260 IPR015991 Uncharacterised deoxyribonuclease TatD-type RD11_RS11260 IPR018228 Deoxyribonuclease, TatD-related, conserved site RD11_RS11260 IPR032466 RD11_RS11260 RD11_RS11265 IPR004622 DNA polymerase III, delta prime subunit RD11_RS11265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11270 IPR018094 Thymidylate kinase RD11_RS11270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11275 IPR003770 Uncharacterised protein family UPF0755, YceG-like RD11_RS11275 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain RD11_RS11280 IPR017703 YgfZ/GcvT conserved site RD11_RS11295 IPR006076 FAD dependent oxidoreductase RD11_RS11295 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS11300 IPR000944 Transcription regulator Rrf2-like RD11_RS11300 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11305 IPR000971 Globin RD11_RS11305 IPR001221 Phenol hydroxylase reductase RD11_RS11305 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS11305 IPR008333 Oxidoreductase, FAD-binding domain RD11_RS11305 IPR009050 Globin-like RD11_RS11305 IPR012292 Globin, structural domain RD11_RS11305 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS11305 IPR023950 Flavohemoprotein RD11_RS11310 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RD11_RS11310 IPR019004 Uncharacterised domain YOR215C, mitochondrial RD11_RS11310 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RD11_RS11315 IPR001584 Integrase, catalytic core RD11_RS11315 IPR009057 Homeodomain-like RD11_RS11315 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11315 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11315 IPR012337 Ribonuclease H-like domain RD11_RS11315 IPR024967 DNA-binding domain, IS481-type RD11_RS11320 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS11325 IPR000515 MetI-like domain RD11_RS11330 IPR015168 SsuA/THI5-like RD11_RS11335 IPR003439 ABC transporter-like RD11_RS11335 IPR003593 AAA+ ATPase domain RD11_RS11335 IPR017871 ABC transporter, conserved site RD11_RS11335 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11340 IPR003439 ABC transporter-like RD11_RS11340 IPR003593 AAA+ ATPase domain RD11_RS11340 IPR017871 ABC transporter, conserved site RD11_RS11340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11340 IPR032781 RD11_RS11340 RD11_RS11345 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS11345 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD11_RS11350 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS11355 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS11360 IPR001753 Crotonase superfamily RD11_RS11360 IPR014748 Crontonase, C-terminal RD11_RS11360 IPR029045 ClpP/crotonase-like domain RD11_RS11365 IPR003507 Muramoyl-tetrapeptide carboxypeptidase RD11_RS11365 IPR027461 LD-carboxypeptidase A, C-terminal domain RD11_RS11365 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RD11_RS11365 IPR029062 Class I glutamine amidotransferase-like RD11_RS11370 IPR016192 APOBEC/CMP deaminase, zinc-binding RD11_RS11370 IPR016193 Cytidine deaminase-like RD11_RS11370 IPR028883 tRNA-specific adenosine deaminase RD11_RS11375 IPR023214 HAD-like domain RD11_RS11385 IPR001584 Integrase, catalytic core RD11_RS11385 IPR009057 Homeodomain-like RD11_RS11385 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11385 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11385 IPR012337 Ribonuclease H-like domain RD11_RS11385 IPR024967 DNA-binding domain, IS481-type RD11_RS11390 IPR005133 Na+/H+ antiporter subunit G RD11_RS11395 IPR007208 Na(+)/H(+) antiporter subunit F-like RD11_RS11400 IPR002758 Na+/H+ antiporter subunit E RD11_RS11405 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD11_RS11410 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RD11_RS11415 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal RD11_RS11415 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase RD11_RS11415 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RD11_RS11415 IPR025383 Domain of unknown function DUF4040 RD11_RS11420 IPR005064 Bordetella uptake gene RD11_RS11425 IPR001584 Integrase, catalytic core RD11_RS11425 IPR009057 Homeodomain-like RD11_RS11425 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11425 IPR012337 Ribonuclease H-like domain RD11_RS11425 IPR024967 DNA-binding domain, IS481-type RD11_RS11435 IPR000847 Transcription regulator HTH, LysR RD11_RS11435 IPR005119 LysR, substrate-binding RD11_RS11435 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11440 IPR002347 Glucose/ribitol dehydrogenase RD11_RS11440 IPR016040 NAD(P)-binding domain RD11_RS11440 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS11445 IPR005064 Bordetella uptake gene RD11_RS11455 IPR001845 HTH ArsR-type DNA-binding domain RD11_RS11455 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11460 IPR011701 Major facilitator superfamily RD11_RS11460 IPR020846 Major facilitator superfamily domain RD11_RS11470 IPR005025 NADPH-dependent FMN reductase-like RD11_RS11470 IPR014063 Arsenate resistance ArsH RD11_RS11470 IPR029039 Flavoprotein-like RD11_RS11480 IPR001584 Integrase, catalytic core RD11_RS11480 IPR009057 Homeodomain-like RD11_RS11480 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11480 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11480 IPR012337 Ribonuclease H-like domain RD11_RS11480 IPR024967 DNA-binding domain, IS481-type RD11_RS11495 IPR005064 Bordetella uptake gene RD11_RS11500 IPR000847 Transcription regulator HTH, LysR RD11_RS11500 IPR005119 LysR, substrate-binding RD11_RS11500 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11505 IPR005064 Bordetella uptake gene RD11_RS11510 IPR002347 Glucose/ribitol dehydrogenase RD11_RS11510 IPR016040 NAD(P)-binding domain RD11_RS11510 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS11515 IPR002347 Glucose/ribitol dehydrogenase RD11_RS11515 IPR016040 NAD(P)-binding domain RD11_RS11520 IPR011234 Fumarylacetoacetase, C-terminal-related RD11_RS11525 IPR000262 FMN-dependent dehydrogenase RD11_RS11525 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RD11_RS11525 IPR013785 Aldolase-type TIM barrel RD11_RS11530 IPR002347 Glucose/ribitol dehydrogenase RD11_RS11530 IPR016040 NAD(P)-binding domain RD11_RS11535 IPR005064 Bordetella uptake gene RD11_RS11540 IPR005119 LysR, substrate-binding RD11_RS11545 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD11_RS11550 IPR004045 Glutathione S-transferase, N-terminal RD11_RS11550 IPR004046 Glutathione S-transferase, C-terminal RD11_RS11550 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS11550 IPR012336 Thioredoxin-like fold RD11_RS11555 IPR009387 Toxin HigB RD11_RS11560 IPR001387 Cro/C1-type helix-turn-helix domain RD11_RS11560 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11565 IPR005546 Autotransporter beta-domain RD11_RS11565 IPR006315 Outer membrane autotransporter barrel RD11_RS11565 IPR011050 Pectin lyase fold/virulence factor RD11_RS11565 IPR013425 Autotransporter-associated beta strand repeat RD11_RS11570 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS11570 IPR001789 Signal transduction response regulator, receiver domain RD11_RS11570 IPR011006 CheY-like superfamily RD11_RS11570 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11570 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS11575 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS11575 IPR011623 7TM-DISM receptor, extracellular domain, type 1 RD11_RS11585 IPR001584 Integrase, catalytic core RD11_RS11585 IPR009057 Homeodomain-like RD11_RS11585 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11585 IPR012337 Ribonuclease H-like domain RD11_RS11585 IPR024967 DNA-binding domain, IS481-type RD11_RS11590 IPR020846 Major facilitator superfamily domain RD11_RS11595 IPR000917 Sulfatase RD11_RS11595 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD11_RS11595 IPR017850 Alkaline-phosphatase-like, core domain RD11_RS11600 IPR023214 HAD-like domain RD11_RS11605 IPR025738 Aerotolerance-related protein BatD RD11_RS11610 IPR002035 von Willebrand factor, type A RD11_RS11610 IPR011990 Tetratricopeptide-like helical domain RD11_RS11610 IPR013105 Tetratricopeptide TPR2 RD11_RS11610 IPR019734 Tetratricopeptide repeat RD11_RS11615 IPR002035 von Willebrand factor, type A RD11_RS11620 IPR002881 Domain of unknown function DUF58 RD11_RS11625 IPR011703 ATPase, AAA-3 RD11_RS11625 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RD11_RS11625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11635 IPR025737 MetA-pathway of phenol degradation, putative RD11_RS11640 IPR005064 Bordetella uptake gene RD11_RS11645 IPR002347 Glucose/ribitol dehydrogenase RD11_RS11645 IPR016040 NAD(P)-binding domain RD11_RS11645 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS11650 IPR005496 Integral membrane protein TerC RD11_RS11650 IPR022301 Integral membrane protein YjbE RD11_RS11655 IPR001584 Integrase, catalytic core RD11_RS11655 IPR009057 Homeodomain-like RD11_RS11655 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11655 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11655 IPR012337 Ribonuclease H-like domain RD11_RS11655 IPR024967 DNA-binding domain, IS481-type RD11_RS11665 IPR003439 ABC transporter-like RD11_RS11665 IPR003593 AAA+ ATPase domain RD11_RS11665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11665 IPR032823 RD11_RS11665 RD11_RS11670 IPR003439 ABC transporter-like RD11_RS11670 IPR003593 AAA+ ATPase domain RD11_RS11670 IPR017871 ABC transporter, conserved site RD11_RS11670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11675 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS11675 IPR009057 Homeodomain-like RD11_RS11675 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS11675 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS11680 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD11_RS11680 IPR016156 FAD/NAD-linked reductase, dimerisation domain RD11_RS11680 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS11680 IPR028202 Reductase, C-terminal RD11_RS11685 IPR001584 Integrase, catalytic core RD11_RS11685 IPR009057 Homeodomain-like RD11_RS11685 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11685 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11685 IPR012337 Ribonuclease H-like domain RD11_RS11685 IPR024967 DNA-binding domain, IS481-type RD11_RS11690 IPR000917 Sulfatase RD11_RS11690 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD11_RS11690 IPR017850 Alkaline-phosphatase-like, core domain RD11_RS11695 IPR002347 Glucose/ribitol dehydrogenase RD11_RS11695 IPR016040 NAD(P)-binding domain RD11_RS11695 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS11700 IPR001584 Integrase, catalytic core RD11_RS11700 IPR009057 Homeodomain-like RD11_RS11700 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11700 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11700 IPR012337 Ribonuclease H-like domain RD11_RS11700 IPR024967 DNA-binding domain, IS481-type RD11_RS11705 IPR007833 Capsule polysaccharide biosynthesis RD11_RS11710 IPR007833 Capsule polysaccharide biosynthesis RD11_RS11715 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD11_RS11715 IPR008089 Nucleotide sugar epimerase RD11_RS11715 IPR016040 NAD(P)-binding domain RD11_RS11720 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD11_RS11720 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS11720 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD11_RS11720 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD11_RS11720 IPR016040 NAD(P)-binding domain RD11_RS11720 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD11_RS11720 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RD11_RS11725 IPR003715 Polysaccharide export protein RD11_RS11725 IPR019554 Soluble ligand binding domain RD11_RS11735 IPR001296 Glycosyl transferase, family 1 RD11_RS11735 IPR011990 Tetratricopeptide-like helical domain RD11_RS11735 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS11740 IPR003856 Lipopolysaccharide biosynthesis RD11_RS11745 IPR003439 ABC transporter-like RD11_RS11745 IPR003593 AAA+ ATPase domain RD11_RS11745 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11750 IPR000412 ABC-2 transporter RD11_RS11750 IPR013525 ABC-2 type transporter RD11_RS11765 IPR011990 Tetratricopeptide-like helical domain RD11_RS11770 IPR002177 DNA-binding protein Dps RD11_RS11770 IPR008331 Ferritin/DPS protein domain RD11_RS11770 IPR009078 Ferritin-like superfamily RD11_RS11770 IPR012347 Ferritin-related RD11_RS11770 IPR023188 DNA-binding protein Dps, conserved site RD11_RS11775 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD11_RS11775 IPR015590 Aldehyde dehydrogenase domain RD11_RS11775 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS11775 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS11775 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS11775 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS11780 IPR000847 Transcription regulator HTH, LysR RD11_RS11780 IPR005119 LysR, substrate-binding RD11_RS11780 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11785 IPR000847 Transcription regulator HTH, LysR RD11_RS11785 IPR005119 LysR, substrate-binding RD11_RS11785 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11790 IPR001650 Helicase, C-terminal RD11_RS11790 IPR004609 ATP-dependent DNA helicase RecG RD11_RS11790 IPR011545 DEAD/DEAH box helicase domain RD11_RS11790 IPR012340 Nucleic acid-binding, OB-fold RD11_RS11790 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS11790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11790 IPR033454 RD11_RS11790 RD11_RS11795 IPR006056 Enamine/imine deaminase YjgF-like RD11_RS11795 IPR006175 YjgF/Yer057p/UK114 family RD11_RS11795 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS11805 IPR001395 Aldo/keto reductase RD11_RS11805 IPR018170 Aldo/keto reductase, conserved site RD11_RS11805 IPR020471 Aldo/keto reductase subgroup RD11_RS11805 IPR023210 NADP-dependent oxidoreductase domain RD11_RS11815 IPR000847 Transcription regulator HTH, LysR RD11_RS11815 IPR005119 LysR, substrate-binding RD11_RS11815 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11820 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS11820 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD11_RS11820 IPR008333 Oxidoreductase, FAD-binding domain RD11_RS11820 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS11825 IPR026045 Ferric binding protein RD11_RS11830 IPR000515 MetI-like domain RD11_RS11835 IPR003439 ABC transporter-like RD11_RS11835 IPR003593 AAA+ ATPase domain RD11_RS11835 IPR017871 ABC transporter, conserved site RD11_RS11835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11840 IPR001584 Integrase, catalytic core RD11_RS11840 IPR009057 Homeodomain-like RD11_RS11840 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11840 IPR012337 Ribonuclease H-like domain RD11_RS11840 IPR024967 DNA-binding domain, IS481-type RD11_RS11845 IPR003829 Pirin, N-terminal domain RD11_RS11845 IPR008778 Pirin, C-terminal domain RD11_RS11845 IPR011051 RmlC-like cupin domain RD11_RS11845 IPR012093 Pirin RD11_RS11845 IPR014710 RmlC-like jelly roll fold RD11_RS11850 IPR003829 Pirin, N-terminal domain RD11_RS11850 IPR011051 RmlC-like cupin domain RD11_RS11850 IPR012093 Pirin RD11_RS11850 IPR014710 RmlC-like jelly roll fold RD11_RS11855 IPR000847 Transcription regulator HTH, LysR RD11_RS11855 IPR005119 LysR, substrate-binding RD11_RS11855 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11860 IPR001789 Signal transduction response regulator, receiver domain RD11_RS11860 IPR002078 RNA polymerase sigma factor 54 interaction domain RD11_RS11860 IPR002197 DNA binding HTH domain, Fis-type RD11_RS11860 IPR003593 AAA+ ATPase domain RD11_RS11860 IPR009057 Homeodomain-like RD11_RS11860 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) RD11_RS11860 IPR011006 CheY-like superfamily RD11_RS11860 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD11_RS11860 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RD11_RS11860 IPR025944 Sigma-54 interaction domain, conserved site RD11_RS11860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11865 IPR000014 PAS domain RD11_RS11865 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS11865 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS11865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS11865 IPR013656 PAS fold-4 RD11_RS11870 IPR001637 Glutamine synthetase class-I, adenylation site RD11_RS11870 IPR004809 Glutamine synthetase type I RD11_RS11870 IPR008146 Glutamine synthetase, catalytic domain RD11_RS11870 IPR008147 Glutamine synthetase, beta-Grasp RD11_RS11870 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RD11_RS11870 IPR027302 Glutamine synthetase, N-terminal conserved site RD11_RS11870 IPR027303 Glutamine synthetase, glycine-rich site RD11_RS11875 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related RD11_RS11875 IPR006638 Elongator protein 3/MiaB/NifB RD11_RS11875 IPR007197 Radical SAM RD11_RS11875 IPR010723 HemN, C-terminal domain RD11_RS11875 IPR023404 Radical SAM, alpha/beta horseshoe RD11_RS11880 IPR001584 Integrase, catalytic core RD11_RS11880 IPR009057 Homeodomain-like RD11_RS11880 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11880 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11880 IPR012337 Ribonuclease H-like domain RD11_RS11880 IPR024967 DNA-binding domain, IS481-type RD11_RS11885 IPR002637 Ham1-like protein RD11_RS11885 IPR020922 Non-canonical purine NTP pyrophosphatase RD11_RS11885 IPR029001 Inosine triphosphate pyrophosphatase-like RD11_RS11890 IPR000160 GGDEF domain RD11_RS11890 IPR001633 EAL domain RD11_RS11890 IPR029787 Nucleotide cyclase RD11_RS11905 IPR000847 Transcription regulator HTH, LysR RD11_RS11905 IPR005119 LysR, substrate-binding RD11_RS11905 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS11910 IPR005656 MmgE/PrpD RD11_RS11915 IPR001247 Exoribonuclease, phosphorolytic domain 1 RD11_RS11915 IPR002381 Ribonuclease phosphorolytic, bacterial-type RD11_RS11915 IPR015847 Exoribonuclease, phosphorolytic domain 2 RD11_RS11915 IPR018336 Ribonuclease PH, conserved site RD11_RS11915 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS11915 IPR027408 PNPase/RNase PH domain RD11_RS11920 IPR005229 Conserved hypothetical protein CHP00255 RD11_RS11920 IPR013527 YicC-like, N-terminal RD11_RS11920 IPR013551 Domain of unknown function DUF1732 RD11_RS11935 IPR001387 Cro/C1-type helix-turn-helix domain RD11_RS11935 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11940 IPR000845 Nucleoside phosphorylase domain RD11_RS11940 IPR011271 AMP nucleosidase RD11_RS11940 IPR018017 Nucleoside phosphorylase RD11_RS11940 IPR018953 AMP nucleoside phosphorylase, N-terminal RD11_RS11945 IPR000064 Endopeptidase, NLPC/P60 domain RD11_RS11950 IPR002347 Glucose/ribitol dehydrogenase RD11_RS11950 IPR016040 NAD(P)-binding domain RD11_RS11950 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS11955 IPR008168 Cytochrome c, class IC RD11_RS11955 IPR009056 Cytochrome c-like domain RD11_RS11955 IPR024167 Cytochrome c4 RD11_RS11960 IPR009056 Cytochrome c-like domain RD11_RS11965 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RD11_RS11965 IPR017665 Guanylate kinase RD11_RS11965 IPR020590 Guanylate kinase, conserved site RD11_RS11965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11970 IPR003716 DNA-directed RNA polymerase, omega subunit RD11_RS11970 IPR006110 RNA polymerase, subunit omega/K/RPB6 RD11_RS11970 IPR012293 RNA polymerase subunit, RPB6/omega RD11_RS11975 IPR002912 ACT domain RD11_RS11975 IPR003607 HD/PDEase domain RD11_RS11975 IPR004095 TGS RD11_RS11975 IPR004811 RelA/SpoT family RD11_RS11975 IPR007685 RelA/SpoT RD11_RS11975 IPR012675 Beta-grasp domain RD11_RS11975 IPR012676 TGS-like RD11_RS11980 IPR003439 ABC transporter-like RD11_RS11980 IPR003593 AAA+ ATPase domain RD11_RS11980 IPR017871 ABC transporter, conserved site RD11_RS11980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS11980 IPR030679 RD11_RS11980 RD11_RS11985 IPR000515 MetI-like domain RD11_RS11985 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS11990 IPR001320 Ionotropic glutamate receptor RD11_RS11990 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS11990 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD11_RS11995 IPR001584 Integrase, catalytic core RD11_RS11995 IPR009057 Homeodomain-like RD11_RS11995 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS11995 IPR012337 Ribonuclease H-like domain RD11_RS11995 IPR024967 DNA-binding domain, IS481-type RD11_RS12005 IPR002220 DapA-like RD11_RS12005 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RD11_RS12005 IPR013785 Aldolase-type TIM barrel RD11_RS12005 IPR020624 Dihydrodipicolinate synthetase, conserved site RD11_RS12005 IPR020625 Dihydrodipicolinate synthetase, active site RD11_RS12010 IPR010653 Lipoprotein, NlpB RD11_RS12015 IPR000259 Fimbrial-type adhesion domain RD11_RS12015 IPR008966 Adhesion domain RD11_RS12020 IPR003347 JmjC domain RD11_RS12025 IPR000432 DNA mismatch repair protein MutS, C-terminal RD11_RS12025 IPR005748 DNA mismatch repair protein MutS, type 1 RD11_RS12025 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RD11_RS12025 IPR007696 DNA mismatch repair protein MutS, core RD11_RS12025 IPR007860 DNA mismatch repair protein MutS, connector domain RD11_RS12025 IPR007861 DNA mismatch repair protein MutS, clamp RD11_RS12025 IPR016151 DNA mismatch repair protein MutS, N-terminal RD11_RS12025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12030 IPR009923 Dodecin RD11_RS12030 IPR025543 Dodecin-like RD11_RS12035 IPR005025 NADPH-dependent FMN reductase-like RD11_RS12035 IPR029039 Flavoprotein-like RD11_RS12040 IPR011008 Dimeric alpha-beta barrel RD11_RS12050 IPR009056 Cytochrome c-like domain RD11_RS12050 IPR010538 Protein of unknown function DUF1111 RD11_RS12060 IPR008311 Uncharacterised conserved protein UCP028101 RD11_RS12060 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RD11_RS12060 IPR015943 WD40/YVTN repeat-like-containing domain RD11_RS12065 IPR001584 Integrase, catalytic core RD11_RS12065 IPR009057 Homeodomain-like RD11_RS12065 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12065 IPR012337 Ribonuclease H-like domain RD11_RS12065 IPR024967 DNA-binding domain, IS481-type RD11_RS12070 IPR006070 YrdC-like domain RD11_RS12070 IPR017945 DHBP synthase RibB-like alpha/beta domain RD11_RS12075 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RD11_RS12090 IPR001584 Integrase, catalytic core RD11_RS12090 IPR009057 Homeodomain-like RD11_RS12090 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12090 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12090 IPR012337 Ribonuclease H-like domain RD11_RS12090 IPR024967 DNA-binding domain, IS481-type RD11_RS12095 IPR000093 DNA recombination protein RecR RD11_RS12095 IPR006171 Toprim domain RD11_RS12095 IPR023627 Recombination protein RecR RD11_RS12095 IPR023628 Recombination protein RecR, C4-type zinc finger RD11_RS12100 IPR004401 Nucleoid-associated protein YbaB RD11_RS12105 IPR003593 AAA+ ATPase domain RD11_RS12105 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD11_RS12105 IPR012763 DNA polymerase III, subunit gamma/ tau RD11_RS12105 IPR022754 DNA polymerase III, gamma subunit, domain III RD11_RS12105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12115 IPR000212 DNA helicase, UvrD/REP type RD11_RS12115 IPR011335 Restriction endonuclease type II-like RD11_RS12115 IPR014016 UvrD-like Helicase, ATP-binding domain RD11_RS12115 IPR014017 DNA helicase, UvrD-like, C-terminal RD11_RS12115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12120 IPR019925 DNA repair protein, predicted RD11_RS12120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12125 IPR011701 Major facilitator superfamily RD11_RS12125 IPR020846 Major facilitator superfamily domain RD11_RS12135 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RD11_RS12135 IPR012338 Beta-lactamase/transpeptidase-like RD11_RS12135 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RD11_RS12140 IPR001584 Integrase, catalytic core RD11_RS12140 IPR009057 Homeodomain-like RD11_RS12140 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12140 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12140 IPR012337 Ribonuclease H-like domain RD11_RS12140 IPR024967 DNA-binding domain, IS481-type RD11_RS12145 IPR027373 Ribbon-helix-helix domain RD11_RS12150 IPR002818 ThiJ/PfpI RD11_RS12150 IPR006286 Peptidase C56, PfpI RD11_RS12150 IPR029062 Class I glutamine amidotransferase-like RD11_RS12155 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RD11_RS12155 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RD11_RS12160 IPR002104 Integrase, catalytic RD11_RS12160 IPR004107 Integrase, SAM-like, N-terminal RD11_RS12160 IPR010998 Integrase, Lambda-type, N-terminal RD11_RS12160 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD11_RS12160 IPR011932 Tyrosine recombinase XerD RD11_RS12160 IPR013762 Integrase-like, catalytic core RD11_RS12160 IPR023009 Tyrosine recombinase XerC/XerD RD11_RS12160 IPR023109 Integrase/recombinase, N-terminal RD11_RS12165 IPR000847 Transcription regulator HTH, LysR RD11_RS12165 IPR005119 LysR, substrate-binding RD11_RS12165 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12170 IPR000399 TPP-binding enzyme, conserved site RD11_RS12170 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS12170 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS12170 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS12170 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS12170 IPR029061 Thiamin diphosphate-binding fold RD11_RS12175 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS12175 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS12175 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS12175 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS12175 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS12180 IPR002539 MaoC-like domain RD11_RS12180 IPR029069 HotDog domain RD11_RS12185 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS12185 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS12185 IPR029061 Thiamin diphosphate-binding fold RD11_RS12190 IPR003439 ABC transporter-like RD11_RS12190 IPR003593 AAA+ ATPase domain RD11_RS12190 IPR017871 ABC transporter, conserved site RD11_RS12190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12190 IPR030679 RD11_RS12190 RD11_RS12195 IPR000515 MetI-like domain RD11_RS12195 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS12200 IPR001320 Ionotropic glutamate receptor RD11_RS12200 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS12205 IPR006035 Ureohydrolase RD11_RS12205 IPR023696 Ureohydrolase domain RD11_RS12210 IPR005471 Transcription regulator IclR, N-terminal RD11_RS12210 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12210 IPR014757 Transcription regulator IclR, C-terminal RD11_RS12210 IPR029016 GAF domain-like RD11_RS12215 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS12220 IPR005145 Putative GTP-binding controlling metal-binding domain RD11_RS12220 IPR006070 YrdC-like domain RD11_RS12220 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RD11_RS12220 IPR017945 DHBP synthase RibB-like alpha/beta domain RD11_RS12225 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD11_RS12225 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RD11_RS12225 IPR011054 Rudiment single hybrid motif RD11_RS12225 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS12225 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS12225 IPR016185 Pre-ATP-grasp domain RD11_RS12230 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain RD11_RS12230 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE RD11_RS12235 IPR003752 Disulphide bond formation protein DsbB/BdbC RD11_RS12235 IPR023380 Disulphide bond formation protein DsbB-like domain RD11_RS12240 IPR001387 Cro/C1-type helix-turn-helix domain RD11_RS12240 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12240 IPR022452 Zinc finger/helix-turn-helix protein, YgiT RD11_RS12240 IPR022453 Zinc finger, YgiT-type RD11_RS12240 IPR032758 RD11_RS12240 RD11_RS12245 IPR031451 RD11_RS12245 RD11_RS12250 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RD11_RS12250 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS12250 IPR018236 SAICAR synthetase, conserved site RD11_RS12250 IPR028923 SAICAR synthetase/ADE2, N-terminal RD11_RS12255 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD11_RS12255 IPR011057 Mss4-like RD11_RS12260 IPR000771 Ketose-bisphosphate aldolase, class-II RD11_RS12260 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype RD11_RS12260 IPR013785 Aldolase-type TIM barrel RD11_RS12265 IPR011037 Pyruvate kinase-like, insert domain RD11_RS12265 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RD11_RS12270 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS12270 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12270 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS12270 IPR029016 GAF domain-like RD11_RS12275 IPR004304 Acetamidase/Formamidase RD11_RS12280 IPR003211 AmiS/UreI transporter RD11_RS12285 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RD11_RS12290 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD11_RS12290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD11_RS12290 IPR016040 NAD(P)-binding domain RD11_RS12290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RD11_RS12295 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD11_RS12295 IPR011057 Mss4-like RD11_RS12300 IPR001584 Integrase, catalytic core RD11_RS12300 IPR009057 Homeodomain-like RD11_RS12300 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12300 IPR012337 Ribonuclease H-like domain RD11_RS12300 IPR024967 DNA-binding domain, IS481-type RD11_RS12305 IPR003439 ABC transporter-like RD11_RS12305 IPR003593 AAA+ ATPase domain RD11_RS12305 IPR017871 ABC transporter, conserved site RD11_RS12305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12305 IPR030679 RD11_RS12305 RD11_RS12310 IPR000515 MetI-like domain RD11_RS12310 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS12310 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD RD11_RS12315 IPR000515 MetI-like domain RD11_RS12315 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS12315 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC RD11_RS12320 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS12320 IPR014337 Ectoine/hydroxyEctoine ABC transporter solute-binding protein EhuB RD11_RS12325 IPR028081 Leucine-binding protein domain RD11_RS12325 IPR028082 Periplasmic binding protein-like I RD11_RS12330 IPR003462 Ornithine cyclodeaminase/mu-crystallin RD11_RS12330 IPR016040 NAD(P)-binding domain RD11_RS12330 IPR023401 Ornithine cyclodeaminase, N-terminal RD11_RS12340 IPR000121 PEP-utilising enzyme, C-terminal RD11_RS12340 IPR006318 Phosphoenolpyruvate-utilising enzyme RD11_RS12340 IPR008279 PEP-utilising enzyme, mobile domain RD11_RS12340 IPR008731 Phosphotransferase system, enzyme I N-terminal RD11_RS12340 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS12340 IPR018274 PEP-utilising enzyme, active site RD11_RS12340 IPR023151 PEP-utilising enzyme, conserved site RD11_RS12340 IPR024692 Phosphotransferase system, enzyme I RD11_RS12345 IPR000032 Phosphocarrier HPr protein-like RD11_RS12345 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RD11_RS12345 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RD11_RS12350 IPR004701 Phosphotransferase system, mannose-type IIA component RD11_RS12355 IPR004215 Prokaryotic glutathione synthetase, N-terminal RD11_RS12355 IPR004218 Prokaryotic glutathione synthetase, ATP-binding RD11_RS12355 IPR006284 Glutathione synthetase, prokaryotic RD11_RS12355 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS12355 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS12355 IPR016185 Pre-ATP-grasp domain RD11_RS12360 IPR001288 Translation initiation factor 3 RD11_RS12360 IPR019813 Translation initiation factor 3, conserved site RD11_RS12360 IPR019814 Translation initiation factor 3, N-terminal RD11_RS12360 IPR019815 Translation initiation factor 3, C-terminal RD11_RS12365 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD11_RS12365 IPR002320 Threonine-tRNA ligase, class IIa RD11_RS12365 IPR004095 TGS RD11_RS12365 IPR004154 Anticodon-binding RD11_RS12365 IPR012675 Beta-grasp domain RD11_RS12365 IPR012676 TGS-like RD11_RS12365 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RD11_RS12365 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain RD11_RS12370 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS12370 IPR001789 Signal transduction response regulator, receiver domain RD11_RS12370 IPR011006 CheY-like superfamily RD11_RS12370 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12370 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS12380 IPR010723 HemN, C-terminal domain RD11_RS12385 IPR001584 Integrase, catalytic core RD11_RS12385 IPR009057 Homeodomain-like RD11_RS12385 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12385 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12385 IPR012337 Ribonuclease H-like domain RD11_RS12385 IPR024967 DNA-binding domain, IS481-type RD11_RS12390 IPR000160 GGDEF domain RD11_RS12390 IPR003018 GAF domain RD11_RS12390 IPR029016 GAF domain-like RD11_RS12390 IPR029787 Nucleotide cyclase RD11_RS12395 IPR001584 Integrase, catalytic core RD11_RS12395 IPR009057 Homeodomain-like RD11_RS12395 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12395 IPR012337 Ribonuclease H-like domain RD11_RS12395 IPR024967 DNA-binding domain, IS481-type RD11_RS12405 IPR011701 Major facilitator superfamily RD11_RS12405 IPR020846 Major facilitator superfamily domain RD11_RS12410 IPR005583 Uncharacterised protein family UPF0246 RD11_RS12415 IPR001584 Integrase, catalytic core RD11_RS12415 IPR009057 Homeodomain-like RD11_RS12415 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12415 IPR012337 Ribonuclease H-like domain RD11_RS12415 IPR024967 DNA-binding domain, IS481-type RD11_RS12420 IPR002347 Glucose/ribitol dehydrogenase RD11_RS12420 IPR011294 3-hydroxybutyrate dehydrogenase RD11_RS12420 IPR016040 NAD(P)-binding domain RD11_RS12420 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS12425 IPR006153 Cation/H+ exchanger RD11_RS12435 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS12435 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RD11_RS12440 IPR016181 Acyl-CoA N-acyltransferase RD11_RS12440 IPR019432 Siderophore biosynthesis protein, conserved domain RD11_RS12445 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RD11_RS12445 IPR022770 Ferric iron reductase FhuF domain RD11_RS12450 IPR023998 Siderophore ferric iron reductase, AHA1954 family RD11_RS12450 IPR024726 Ferric iron reductase, C-terminal RD11_RS12455 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD11_RS12455 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS12460 IPR009057 Homeodomain-like RD11_RS12460 IPR018060 DNA binding HTH domain, AraC-type RD11_RS12465 IPR011701 Major facilitator superfamily RD11_RS12465 IPR020846 Major facilitator superfamily domain RD11_RS12470 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS12470 IPR010105 TonB-dependent siderophore receptor RD11_RS12470 IPR012910 TonB-dependent receptor, plug RD11_RS12475 IPR002771 Multiple antibiotic resistance (MarC)-related RD11_RS12485 IPR000160 GGDEF domain RD11_RS12485 IPR029787 Nucleotide cyclase RD11_RS12510 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain RD11_RS12510 IPR002317 Serine-tRNA ligase, type1 RD11_RS12510 IPR010978 tRNA-binding arm RD11_RS12510 IPR015866 Serine-tRNA synthetase, type1, N-terminal RD11_RS12515 IPR003593 AAA+ ATPase domain RD11_RS12515 IPR003959 ATPase, AAA-type, core RD11_RS12515 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RD11_RS12515 IPR021886 MgsA AAA+ ATPase C-terminal RD11_RS12515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12515 IPR032423 RD11_RS12515 RD11_RS12520 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RD11_RS12520 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria RD11_RS12520 IPR029046 Lipoprotein localisation LolA/LolB/LppX RD11_RS12525 IPR002543 FtsK domain RD11_RS12525 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12525 IPR018541 FtsK gamma domain RD11_RS12525 IPR025199 Domain of unknown function DUF4117 RD11_RS12525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12530 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD11_RS12530 IPR005982 Thioredoxin reductase RD11_RS12530 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD11_RS12530 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS12535 IPR002625 Smr protein/MutS2 C-terminal RD11_RS12540 IPR000390 Small multidrug resistance protein family RD11_RS12545 IPR001584 Integrase, catalytic core RD11_RS12545 IPR009057 Homeodomain-like RD11_RS12545 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12545 IPR012337 Ribonuclease H-like domain RD11_RS12545 IPR024967 DNA-binding domain, IS481-type RD11_RS12550 IPR001734 Sodium/solute symporter RD11_RS12550 IPR018247 EF-Hand 1, calcium-binding site RD11_RS12550 IPR019899 Sodium/solute symporter, VC2705 subfamily RD11_RS12555 IPR019886 Sodium symporter small subunit, predicted RD11_RS12560 IPR004623 Potassium-transporting ATPase A chain RD11_RS12565 IPR001757 Cation-transporting P-type ATPase RD11_RS12565 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA RD11_RS12565 IPR008250 P-type ATPase, A domain RD11_RS12565 IPR018303 P-type ATPase, phosphorylation site RD11_RS12565 IPR023214 HAD-like domain RD11_RS12565 IPR023299 P-type ATPase, cytoplasmic domain N RD11_RS12570 IPR003820 Potassium-transporting ATPase C chain RD11_RS12580 IPR001789 Signal transduction response regulator, receiver domain RD11_RS12580 IPR001867 Signal transduction response regulator, C-terminal RD11_RS12580 IPR011006 CheY-like superfamily RD11_RS12580 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12585 IPR001584 Integrase, catalytic core RD11_RS12585 IPR009057 Homeodomain-like RD11_RS12585 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12585 IPR012337 Ribonuclease H-like domain RD11_RS12585 IPR024967 DNA-binding domain, IS481-type RD11_RS12590 IPR007016 O-antigen ligase-related RD11_RS12595 IPR002201 Glycosyl transferase, family 9 RD11_RS12600 IPR001804 Isocitrate and isopropylmalate dehydrogenases family RD11_RS12600 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic RD11_RS12600 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RD11_RS12600 IPR024084 Isopropylmalate dehydrogenase-like domain RD11_RS12605 IPR014993 Protein of unknown function DUF1841 RD11_RS12610 IPR008168 Cytochrome c, class IC RD11_RS12610 IPR009056 Cytochrome c-like domain RD11_RS12615 IPR009056 Cytochrome c-like domain RD11_RS12620 IPR001584 Integrase, catalytic core RD11_RS12620 IPR009057 Homeodomain-like RD11_RS12620 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12620 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12620 IPR012337 Ribonuclease H-like domain RD11_RS12620 IPR024967 DNA-binding domain, IS481-type RD11_RS12625 IPR003593 AAA+ ATPase domain RD11_RS12625 IPR003959 ATPase, AAA-type, core RD11_RS12625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12630 IPR008912 Uncharacterised protein family CoxE-like RD11_RS12635 IPR016181 Acyl-CoA N-acyltransferase RD11_RS12645 IPR001431 Peptidase M16, zinc-binding site RD11_RS12645 IPR007863 Peptidase M16, C-terminal domain RD11_RS12645 IPR011237 Peptidase M16 domain RD11_RS12645 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RD11_RS12645 IPR011765 Peptidase M16, N-terminal RD11_RS12650 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RD11_RS12650 IPR001623 DnaJ domain RD11_RS12650 IPR002939 Chaperone DnaJ, C-terminal RD11_RS12650 IPR008971 HSP40/DnaJ peptide-binding RD11_RS12650 IPR012724 Chaperone DnaJ RD11_RS12650 IPR018253 DnaJ domain, conserved site RD11_RS12655 IPR012725 Chaperone DnaK RD11_RS12655 IPR013126 Heat shock protein 70 family RD11_RS12655 IPR018181 Heat shock protein 70, conserved site RD11_RS12655 IPR029047 Heat shock protein 70kD, peptide-binding domain RD11_RS12655 IPR029048 Heat shock protein 70kD, C-terminal domain RD11_RS12660 IPR012336 Thioredoxin-like fold RD11_RS12665 IPR000740 GrpE nucleotide exchange factor RD11_RS12665 IPR009012 GrpE nucleotide exchange factor, head RD11_RS12665 IPR013805 GrpE nucleotide exchange factor, coiled-coil RD11_RS12675 IPR001015 Ferrochelatase RD11_RS12675 IPR019772 Ferrochelatase, active site RD11_RS12680 IPR002571 Heat-inducible transcription repressor HrcA RD11_RS12680 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain RD11_RS12680 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12680 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal RD11_RS12680 IPR029016 GAF domain-like RD11_RS12685 IPR002504 Inorganic polyphosphate/ATP-NAD kinase RD11_RS12685 IPR016064 ATP-NAD kinase-like domain RD11_RS12685 IPR017437 ATP-NAD kinase, PpnK-type, all-beta RD11_RS12685 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 RD11_RS12690 IPR003395 RecF/RecN/SMC, N-terminal RD11_RS12690 IPR004604 DNA recombination/repair protein RecN RD11_RS12690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12695 IPR002481 Ferric-uptake regulator RD11_RS12695 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12700 IPR007450 Lipoprotein SmpA/OmlA RD11_RS12700 IPR026592 Outer membrane protein assembly factor BamE RD11_RS12705 IPR000846 Dihydrodipicolinate reductase, N-terminal RD11_RS12705 IPR016040 NAD(P)-binding domain RD11_RS12705 IPR022663 Dihydrodipicolinate reductase, C-terminal RD11_RS12705 IPR022664 Dihydrodipicolinate reductase, conserved site RD11_RS12705 IPR023940 Dihydrodipicolinate reductase, bacterial RD11_RS12710 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RD11_RS12710 IPR006094 FAD linked oxidase, N-terminal RD11_RS12710 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RD11_RS12710 IPR016166 FAD-binding, type 2 RD11_RS12710 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS12710 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS12720 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS12720 IPR029058 Alpha/Beta hydrolase fold RD11_RS12725 IPR005656 MmgE/PrpD RD11_RS12730 IPR005064 Bordetella uptake gene RD11_RS12735 IPR002376 Formyl transferase, N-terminal RD11_RS12735 IPR004810 Formyltetrahydrofolate deformylase RD11_RS12740 IPR007375 Sarcosine oxidase, gamma subunit RD11_RS12745 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD11_RS12745 IPR006222 Glycine cleavage T-protein, N-terminal RD11_RS12745 IPR006277 Sarcosine oxidase, alpha subunit RD11_RS12745 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RD11_RS12745 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS12745 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD11_RS12745 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RD11_RS12750 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric RD11_RS12755 IPR006076 FAD dependent oxidoreductase RD11_RS12755 IPR006278 Sarcosine oxidase, beta subunit, heterotetrameric RD11_RS12755 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS12760 IPR008257 Renal dipeptidase family RD11_RS12760 IPR032466 RD11_RS12760 RD11_RS12765 IPR000847 Transcription regulator HTH, LysR RD11_RS12765 IPR005119 LysR, substrate-binding RD11_RS12765 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12770 IPR003767 Malate/L-lactate dehydrogenase RD11_RS12775 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RD11_RS12775 IPR016040 NAD(P)-binding domain RD11_RS12775 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD11_RS12775 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD11_RS12775 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site RD11_RS12780 IPR005064 Bordetella uptake gene RD11_RS12785 IPR001584 Integrase, catalytic core RD11_RS12785 IPR009057 Homeodomain-like RD11_RS12785 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS12785 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12785 IPR012337 Ribonuclease H-like domain RD11_RS12785 IPR024967 DNA-binding domain, IS481-type RD11_RS12795 IPR018076 Type II secretion system F domain RD11_RS12800 IPR000253 Forkhead-associated (FHA) domain RD11_RS12800 IPR001482 Type II secretion system protein E RD11_RS12800 IPR003593 AAA+ ATPase domain RD11_RS12800 IPR008984 SMAD/FHA domain RD11_RS12800 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12805 IPR001775 GspD/PilQ family RD11_RS12805 IPR004845 Type II secretion system GspD, conserved site RD11_RS12805 IPR004846 Type II/III secretion system RD11_RS12805 IPR032789 RD11_RS12805 RD11_RS12810 IPR013974 SAF domain RD11_RS12810 IPR017592 Pilus assembly, Flp-type CpaB RD11_RS12810 IPR031571 RD11_RS12810 RD11_RS12835 IPR012556 Entericidin EcnAB RD11_RS12840 IPR011234 Fumarylacetoacetase, C-terminal-related RD11_RS12845 IPR008162 Inorganic pyrophosphatase RD11_RS12850 IPR005254 Heme biosynthesis-associated TPR protein RD11_RS12850 IPR010817 HemY, N-terminal RD11_RS12850 IPR011990 Tetratricopeptide-like helical domain RD11_RS12855 IPR007470 HemX RD11_RS12860 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase RD11_RS12865 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase RD11_RS12865 IPR022417 Porphobilinogen deaminase, N-terminal RD11_RS12865 IPR022418 Porphobilinogen deaminase, C-terminal RD11_RS12865 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RD11_RS12870 IPR005496 Integral membrane protein TerC RD11_RS12870 IPR022301 Integral membrane protein YjbE RD11_RS12875 IPR005496 Integral membrane protein TerC RD11_RS12875 IPR022301 Integral membrane protein YjbE RD11_RS12880 IPR003781 CoA-binding RD11_RS12880 IPR005810 Succinyl-CoA ligase, alpha subunit RD11_RS12880 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RD11_RS12880 IPR016040 NAD(P)-binding domain RD11_RS12880 IPR016102 Succinyl-CoA synthetase-like RD11_RS12880 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RD11_RS12885 IPR005809 Succinyl-CoA synthetase, beta subunit RD11_RS12885 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RD11_RS12885 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RD11_RS12885 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS12885 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS12885 IPR016102 Succinyl-CoA synthetase-like RD11_RS12885 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RD11_RS12890 IPR021312 Protein of unknown function DUF2889 RD11_RS12895 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RD11_RS12895 IPR006276 Cobalamin-independent methionine synthase RD11_RS12895 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal RD11_RS12900 IPR000847 Transcription regulator HTH, LysR RD11_RS12900 IPR005119 LysR, substrate-binding RD11_RS12900 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12905 IPR003783 Regulatory protein RecX RD11_RS12905 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12910 IPR003593 AAA+ ATPase domain RD11_RS12910 IPR013765 DNA recombination and repair protein RecA RD11_RS12910 IPR020584 DNA recombination/repair protein RecA, conserved site RD11_RS12910 IPR023400 DNA recombination and repair protein RecA, C-terminal RD11_RS12910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12915 IPR001789 Signal transduction response regulator, receiver domain RD11_RS12915 IPR001867 Signal transduction response regulator, C-terminal RD11_RS12915 IPR011006 CheY-like superfamily RD11_RS12915 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12915 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS12920 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS12920 IPR003660 HAMP linker domain RD11_RS12920 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS12920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS12920 IPR013727 Two-component sensor kinase N-terminal RD11_RS12925 IPR005828 General substrate transporter RD11_RS12925 IPR005829 Sugar transporter, conserved site RD11_RS12925 IPR020846 Major facilitator superfamily domain RD11_RS12930 IPR001753 Crotonase superfamily RD11_RS12930 IPR014748 Crontonase, C-terminal RD11_RS12930 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS12930 IPR029045 ClpP/crotonase-like domain RD11_RS12935 IPR003439 ABC transporter-like RD11_RS12935 IPR003593 AAA+ ATPase domain RD11_RS12935 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS12935 IPR012340 Nucleic acid-binding, OB-fold RD11_RS12935 IPR013611 Transport-associated OB, type 2 RD11_RS12935 IPR017871 ABC transporter, conserved site RD11_RS12935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS12940 IPR000515 MetI-like domain RD11_RS12950 IPR002347 Glucose/ribitol dehydrogenase RD11_RS12950 IPR016040 NAD(P)-binding domain RD11_RS12950 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS12955 IPR002539 MaoC-like domain RD11_RS12955 IPR029069 HotDog domain RD11_RS12960 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD11_RS12960 IPR012340 Nucleic acid-binding, OB-fold RD11_RS12960 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD11_RS12965 IPR016039 Thiolase-like RD11_RS12970 IPR000847 Transcription regulator HTH, LysR RD11_RS12970 IPR005119 LysR, substrate-binding RD11_RS12970 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS12975 IPR003673 CoA-transferase family III RD11_RS12975 IPR023606 CoA-transferase family III domain RD11_RS12985 IPR007476 Putative exonuclease, RdgC RD11_RS12990 IPR002082 Aspartate carbamoyltransferase RD11_RS12990 IPR006130 Aspartate/ornithine carbamoyltransferase RD11_RS12990 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD11_RS12990 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD11_RS13005 IPR012556 Entericidin EcnAB RD11_RS13010 IPR007346 Endonuclease I RD11_RS13030 IPR001584 Integrase, catalytic core RD11_RS13030 IPR009057 Homeodomain-like RD11_RS13030 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13030 IPR012337 Ribonuclease H-like domain RD11_RS13030 IPR024967 DNA-binding domain, IS481-type RD11_RS13040 IPR007461 Ysc84 actin-binding domain RD11_RS13055 IPR000551 MerR-type HTH domain RD11_RS13055 IPR009061 DNA binding domain, putative RD11_RS13060 IPR000119 Histone-like bacterial DNA-binding protein RD11_RS13060 IPR005684 Integration host factor, alpha subunit RD11_RS13060 IPR010992 Integration host factor (IHF)-like DNA-binding domain RD11_RS13060 IPR020816 Histone-like DNA-binding protein, conserved site RD11_RS13065 IPR002547 tRNA-binding domain RD11_RS13065 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RD11_RS13065 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding RD11_RS13065 IPR005146 B3/B4 tRNA-binding domain RD11_RS13065 IPR005147 tRNA synthetase, B5-domain RD11_RS13065 IPR009061 DNA binding domain, putative RD11_RS13065 IPR012340 Nucleic acid-binding, OB-fold RD11_RS13065 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RD11_RS13070 IPR002319 Phenylalanyl-tRNA synthetase RD11_RS13070 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RD11_RS13070 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RD11_RS13070 IPR010978 tRNA-binding arm RD11_RS13070 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RD11_RS13075 IPR005813 Ribosomal protein L20 RD11_RS13080 IPR001706 Ribosomal protein L35, non-mitochondrial RD11_RS13080 IPR018265 Ribosomal protein L35, conserved site RD11_RS13080 IPR021137 Ribosomal protein L35 RD11_RS13085 IPR001584 Integrase, catalytic core RD11_RS13085 IPR009057 Homeodomain-like RD11_RS13085 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13085 IPR012337 Ribonuclease H-like domain RD11_RS13085 IPR024967 DNA-binding domain, IS481-type RD11_RS13090 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase RD11_RS13090 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RD11_RS13090 IPR029054 dUTPase-like RD11_RS13095 IPR001584 Integrase, catalytic core RD11_RS13095 IPR009057 Homeodomain-like RD11_RS13095 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13095 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13095 IPR012337 Ribonuclease H-like domain RD11_RS13095 IPR024967 DNA-binding domain, IS481-type RD11_RS13100 IPR000524 Transcription regulator HTH, GntR RD11_RS13100 IPR004839 Aminotransferase, class I/classII RD11_RS13100 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13100 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS13100 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS13100 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS13110 IPR001584 Integrase, catalytic core RD11_RS13110 IPR009057 Homeodomain-like RD11_RS13110 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13110 IPR012337 Ribonuclease H-like domain RD11_RS13110 IPR024967 DNA-binding domain, IS481-type RD11_RS13115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS13120 IPR000182 GNAT domain RD11_RS13120 IPR016181 Acyl-CoA N-acyltransferase RD11_RS13120 IPR032962 RD11_RS13120 RD11_RS13125 IPR032816 RD11_RS13125 RD11_RS13125 IPR032818 RD11_RS13125 RD11_RS13130 IPR007404 Protein of unknown function DUF457 RD11_RS13135 IPR001584 Integrase, catalytic core RD11_RS13135 IPR009057 Homeodomain-like RD11_RS13135 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13135 IPR012337 Ribonuclease H-like domain RD11_RS13135 IPR024967 DNA-binding domain, IS481-type RD11_RS13140 IPR009061 DNA binding domain, putative RD11_RS13140 IPR015358 Transcription regulator MerR, DNA binding RD11_RS13150 IPR000843 Transcription regulator HTH, LacI RD11_RS13150 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13150 IPR028082 Periplasmic binding protein-like I RD11_RS13155 IPR003439 ABC transporter-like RD11_RS13155 IPR003593 AAA+ ATPase domain RD11_RS13155 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS13155 IPR017871 ABC transporter, conserved site RD11_RS13155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13160 IPR000515 MetI-like domain RD11_RS13165 IPR000515 MetI-like domain RD11_RS13170 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS13170 IPR030678 RD11_RS13170 RD11_RS13175 IPR002933 Peptidase M20 RD11_RS13175 IPR011650 Peptidase M20, dimerisation domain RD11_RS13180 IPR014922 Domain of unknown function DUF1801 RD11_RS13185 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD11_RS13190 IPR007396 Transcriptional regulator PAI 2-type RD11_RS13190 IPR012349 FMN-binding split barrel RD11_RS13195 IPR000524 Transcription regulator HTH, GntR RD11_RS13195 IPR004839 Aminotransferase, class I/classII RD11_RS13195 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13195 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS13195 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS13195 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS13200 IPR011701 Major facilitator superfamily RD11_RS13200 IPR020846 Major facilitator superfamily domain RD11_RS13205 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS13205 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD11_RS13205 IPR011032 GroES (chaperonin 10)-like RD11_RS13205 IPR013149 Alcohol dehydrogenase, C-terminal RD11_RS13205 IPR013154 Alcohol dehydrogenase GroES-like RD11_RS13205 IPR016040 NAD(P)-binding domain RD11_RS13205 IPR020843 Polyketide synthase, enoylreductase RD11_RS13210 IPR001613 Flavin amine oxidase RD11_RS13210 IPR002937 Amine oxidase RD11_RS13210 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS13215 IPR011051 RmlC-like cupin domain RD11_RS13215 IPR014710 RmlC-like jelly roll fold RD11_RS13215 IPR025979 ChrR-like cupin domain RD11_RS13220 IPR000847 Transcription regulator HTH, LysR RD11_RS13220 IPR005119 LysR, substrate-binding RD11_RS13220 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13225 IPR002818 ThiJ/PfpI RD11_RS13225 IPR009057 Homeodomain-like RD11_RS13225 IPR018060 DNA binding HTH domain, AraC-type RD11_RS13225 IPR018062 HTH domain AraC-type, conserved site RD11_RS13225 IPR029062 Class I glutamine amidotransferase-like RD11_RS13230 IPR001279 Beta-lactamase-like RD11_RS13240 IPR001584 Integrase, catalytic core RD11_RS13240 IPR009057 Homeodomain-like RD11_RS13240 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13240 IPR012337 Ribonuclease H-like domain RD11_RS13240 IPR024967 DNA-binding domain, IS481-type RD11_RS13245 IPR001279 Beta-lactamase-like RD11_RS13245 IPR011108 RNA-metabolising metallo-beta-lactamase RD11_RS13245 IPR022712 Beta-Casp domain RD11_RS13250 IPR001902 Sulphate anion transporter RD11_RS13250 IPR002645 STAS domain RD11_RS13250 IPR011547 Sulphate transporter RD11_RS13260 IPR001584 Integrase, catalytic core RD11_RS13260 IPR009057 Homeodomain-like RD11_RS13260 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13260 IPR012337 Ribonuclease H-like domain RD11_RS13260 IPR024967 DNA-binding domain, IS481-type RD11_RS13265 IPR029062 Class I glutamine amidotransferase-like RD11_RS13270 IPR002840 Domain of unknown function DUF126 RD11_RS13270 IPR008279 PEP-utilising enzyme, mobile domain RD11_RS13270 IPR012016 Uncharacterised protein family UPF0107 RD11_RS13270 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS13275 IPR007506 Domain of unknown function DUF521 RD11_RS13280 IPR000515 MetI-like domain RD11_RS13285 IPR003439 ABC transporter-like RD11_RS13285 IPR003593 AAA+ ATPase domain RD11_RS13285 IPR017871 ABC transporter, conserved site RD11_RS13285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13290 IPR015168 SsuA/THI5-like RD11_RS13295 IPR011059 Metal-dependent hydrolase, composite domain RD11_RS13295 IPR013108 Amidohydrolase 3 RD11_RS13295 IPR032466 RD11_RS13295 RD11_RS13300 IPR005471 Transcription regulator IclR, N-terminal RD11_RS13300 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13300 IPR014757 Transcription regulator IclR, C-terminal RD11_RS13300 IPR029016 GAF domain-like RD11_RS13310 IPR011701 Major facilitator superfamily RD11_RS13310 IPR020846 Major facilitator superfamily domain RD11_RS13315 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS13315 IPR009057 Homeodomain-like RD11_RS13315 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS13315 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS13320 IPR012893 HipA-like, C-terminal RD11_RS13320 IPR012894 HipA, N-terminal subdomain 2 RD11_RS13320 IPR017508 HipA, N-terminal subdomain 1 RD11_RS13325 IPR001387 Cro/C1-type helix-turn-helix domain RD11_RS13325 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13330 IPR001674 GMP synthase, C-terminal RD11_RS13330 IPR004739 GMP synthase, N-terminal RD11_RS13330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS13330 IPR017926 Glutamine amidotransferase RD11_RS13330 IPR022310 NAD/GMP synthase RD11_RS13330 IPR022955 GMP synthase RD11_RS13330 IPR029062 Class I glutamine amidotransferase-like RD11_RS13335 IPR000644 CBS domain RD11_RS13335 IPR001093 IMP dehydrogenase/GMP reductase RD11_RS13335 IPR005990 Inosine-5'-monophosphate dehydrogenase RD11_RS13335 IPR013785 Aldolase-type TIM barrel RD11_RS13335 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RD11_RS13340 IPR018715 Protein of unknown function DUF2239 RD11_RS13345 IPR005546 Autotransporter beta-domain RD11_RS13355 IPR000014 PAS domain RD11_RS13355 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS13355 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13355 IPR013656 PAS fold-4 RD11_RS13355 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS13365 IPR001584 Integrase, catalytic core RD11_RS13365 IPR009057 Homeodomain-like RD11_RS13365 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13365 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13365 IPR012337 Ribonuclease H-like domain RD11_RS13365 IPR024967 DNA-binding domain, IS481-type RD11_RS13370 IPR005064 Bordetella uptake gene RD11_RS13375 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13380 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD11_RS13380 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type RD11_RS13380 IPR029052 Metallo-dependent phosphatase-like RD11_RS13385 IPR006076 FAD dependent oxidoreductase RD11_RS13385 IPR023080 D-amino acid dehydrogenase small subunit, DadA RD11_RS13385 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS13390 IPR000485 AsnC-type HTH domain RD11_RS13390 IPR011008 Dimeric alpha-beta barrel RD11_RS13390 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13390 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS13390 IPR019888 Transcription regulator AsnC-type RD11_RS13395 IPR007462 Protein of unknown function DUF502 RD11_RS13400 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria RD11_RS13405 IPR014597 ABC transporter, periplasmic substrate-binding protein RD11_RS13410 IPR018678 Protein of unknown function DUF2160, transmembrane RD11_RS13415 IPR000515 MetI-like domain RD11_RS13420 IPR000515 MetI-like domain RD11_RS13425 IPR003439 ABC transporter-like RD11_RS13425 IPR003593 AAA+ ATPase domain RD11_RS13425 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13430 IPR003439 ABC transporter-like RD11_RS13430 IPR003593 AAA+ ATPase domain RD11_RS13430 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS13430 IPR012340 Nucleic acid-binding, OB-fold RD11_RS13430 IPR013611 Transport-associated OB, type 2 RD11_RS13430 IPR017871 ABC transporter, conserved site RD11_RS13430 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13435 IPR001034 HTH DeoR N-terminal domain RD11_RS13435 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13435 IPR014036 DeoR C-terminal sensor domain RD11_RS13435 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RD11_RS13440 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RD11_RS13440 IPR006076 FAD dependent oxidoreductase RD11_RS13440 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS13440 IPR031656 RD11_RS13440 RD11_RS13445 IPR005471 Transcription regulator IclR, N-terminal RD11_RS13445 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13445 IPR014757 Transcription regulator IclR, C-terminal RD11_RS13445 IPR029016 GAF domain-like RD11_RS13450 IPR002347 Glucose/ribitol dehydrogenase RD11_RS13450 IPR016040 NAD(P)-binding domain RD11_RS13455 IPR005064 Bordetella uptake gene RD11_RS13460 IPR003953 FAD binding domain RD11_RS13460 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS13460 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RD11_RS13465 IPR006680 Amidohydrolase 1 RD11_RS13465 IPR032466 RD11_RS13465 RD11_RS13470 IPR002818 ThiJ/PfpI RD11_RS13470 IPR029062 Class I glutamine amidotransferase-like RD11_RS13475 IPR008551 Protein of unknown function DUF833 RD11_RS13480 IPR013784 Carbohydrate-binding-like fold RD11_RS13480 IPR014766 Carboxypeptidase, regulatory domain RD11_RS13485 IPR005064 Bordetella uptake gene RD11_RS13490 IPR002220 DapA-like RD11_RS13490 IPR013785 Aldolase-type TIM barrel RD11_RS13495 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13495 IPR014757 Transcription regulator IclR, C-terminal RD11_RS13495 IPR029016 GAF domain-like RD11_RS13500 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RD11_RS13500 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RD11_RS13505 IPR014509 Uncharacterised conserved protein UCP020606 RD11_RS13510 IPR000352 Peptide chain release factor class I/class II RD11_RS13515 IPR024924 7-carboxy-7-deazaguanine synthase-like RD11_RS13515 IPR030977 RD11_RS13515 RD11_RS13520 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RD11_RS13525 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS13525 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD11_RS13530 IPR001303 Class II aldolase/adducin N-terminal RD11_RS13535 IPR001387 Cro/C1-type helix-turn-helix domain RD11_RS13535 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13535 IPR011051 RmlC-like cupin domain RD11_RS13535 IPR013096 Cupin 2, conserved barrel RD11_RS13535 IPR014710 RmlC-like jelly roll fold RD11_RS13540 IPR000835 MarR-type HTH domain RD11_RS13540 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13540 IPR023187 Transcriptional regulator MarR-type, conserved site RD11_RS13545 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein RD11_RS13550 IPR001584 Integrase, catalytic core RD11_RS13550 IPR009057 Homeodomain-like RD11_RS13550 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13550 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13550 IPR012337 Ribonuclease H-like domain RD11_RS13550 IPR024967 DNA-binding domain, IS481-type RD11_RS13555 IPR008638 Filamentous haemagglutinin, N-terminal RD11_RS13555 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RD11_RS13555 IPR011050 Pectin lyase fold/virulence factor RD11_RS13555 IPR012334 Pectin lyase fold RD11_RS13555 IPR025157 Haemagluttinin repeat RD11_RS13560 IPR010073 Phosphoribosylformylglycinamidine synthase RD11_RS13560 IPR010918 AIR synthase-related protein, C-terminal domain RD11_RS13560 IPR016188 PurM, N-terminal-like RD11_RS13560 IPR029062 Class I glutamine amidotransferase-like RD11_RS13565 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component RD11_RS13570 IPR004681 TRAP transporter permease protein RD11_RS13570 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit RD11_RS13575 IPR004682 TRAP dicarboxylate transporter RD11_RS13575 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS13580 IPR001584 Integrase, catalytic core RD11_RS13580 IPR009057 Homeodomain-like RD11_RS13580 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13580 IPR012337 Ribonuclease H-like domain RD11_RS13580 IPR024967 DNA-binding domain, IS481-type RD11_RS13585 IPR001584 Integrase, catalytic core RD11_RS13585 IPR009057 Homeodomain-like RD11_RS13585 IPR012337 Ribonuclease H-like domain RD11_RS13585 IPR024967 DNA-binding domain, IS481-type RD11_RS13590 IPR000259 Fimbrial-type adhesion domain RD11_RS13590 IPR008966 Adhesion domain RD11_RS13595 IPR000873 AMP-dependent synthetase/ligase RD11_RS13595 IPR011880 Phenylacetate-CoA ligase RD11_RS13595 IPR028154 AMP-dependent ligase, C-terminal RD11_RS13600 IPR003736 Phenylacetic acid degradation-related domain RD11_RS13600 IPR006683 Thioesterase superfamily RD11_RS13600 IPR011973 Phenylacetic acid degradation protein PaaD RD11_RS13600 IPR029069 HotDog domain RD11_RS13605 IPR001753 Crotonase superfamily RD11_RS13605 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RD11_RS13605 IPR014748 Crontonase, C-terminal RD11_RS13605 IPR029045 ClpP/crotonase-like domain RD11_RS13610 IPR011975 Phenylacetic acid degradation protein PaaN2 RD11_RS13610 IPR015590 Aldehyde dehydrogenase domain RD11_RS13610 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS13610 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS13610 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS13615 IPR001584 Integrase, catalytic core RD11_RS13615 IPR009057 Homeodomain-like RD11_RS13615 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13615 IPR012337 Ribonuclease H-like domain RD11_RS13615 IPR024967 DNA-binding domain, IS481-type RD11_RS13620 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS13620 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS13620 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD11_RS13620 IPR001834 NADH:cytochrome b5 reductase (CBR) RD11_RS13620 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS13620 IPR008333 Oxidoreductase, FAD-binding domain RD11_RS13620 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit RD11_RS13620 IPR012675 Beta-grasp domain RD11_RS13620 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS13625 IPR002744 Domain of unknown function DUF59 RD11_RS13625 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit RD11_RS13630 IPR007814 Phenylacetic acid catabolic RD11_RS13630 IPR009078 Ferritin-like superfamily RD11_RS13630 IPR011882 Phenylacetate-CoA oxygenase, PaaI subunit RD11_RS13630 IPR012347 Ferritin-related RD11_RS13635 IPR009359 Phenylacetic acid degradation B RD11_RS13640 IPR007814 Phenylacetic acid catabolic RD11_RS13640 IPR009078 Ferritin-like superfamily RD11_RS13640 IPR011881 Phenylacetate-CoA oxygenase, PaaG subunit RD11_RS13640 IPR012347 Ferritin-related RD11_RS13645 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX RD11_RS13645 IPR012906 PaaX-like, N-terminal RD11_RS13645 IPR013225 PaaX-like, C-terminal RD11_RS13650 IPR004443 YjeF N-terminal domain RD11_RS13655 IPR012337 Ribonuclease H-like domain RD11_RS13655 IPR013520 Exonuclease, RNase T/DNA polymerase III RD11_RS13655 IPR022894 Oligoribonuclease RD11_RS13660 IPR001915 Peptidase M48 RD11_RS13660 IPR027057 CAAX prenyl protease 1 RD11_RS13660 IPR032456 RD11_RS13660 RD11_RS13665 IPR004881 Ribosome biogenesis GTPase RsgA, putative RD11_RS13665 IPR010914 EngC GTPase RD11_RS13665 IPR012340 Nucleic acid-binding, OB-fold RD11_RS13665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13670 IPR000515 MetI-like domain RD11_RS13670 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD11_RS13675 IPR000515 MetI-like domain RD11_RS13680 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS13680 IPR030678 RD11_RS13680 RD11_RS13685 IPR000101 Gamma-glutamyltranspeptidase RD11_RS13685 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS13690 IPR000847 Transcription regulator HTH, LysR RD11_RS13690 IPR005119 LysR, substrate-binding RD11_RS13690 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13710 IPR004260 Pyrimidine dimer DNA glycosylase RD11_RS13710 IPR021143 Pyrimidine dimer DNA glycosylase, endonuclease V type RD11_RS13710 IPR024796 T4 endonuclease V RD11_RS13715 IPR002187 Nitrogen regulatory protein PII RD11_RS13715 IPR002332 Nitrogen regulatory protein P-II, urydylation site RD11_RS13715 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD11_RS13715 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD11_RS13715 IPR017918 Nitrogen regulatory protein PII, conserved site RD11_RS13720 IPR003010 Carbon-nitrogen hydrolase RD11_RS13720 IPR003694 NAD(+) synthetase RD11_RS13720 IPR014445 Glutamine-dependent NAD(+) synthetase RD11_RS13720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS13720 IPR022310 NAD/GMP synthase RD11_RS13725 IPR006685 Mechanosensitive ion channel MscS RD11_RS13725 IPR010920 Like-Sm (LSM) domain RD11_RS13725 IPR030192 RD11_RS13725 RD11_RS13730 IPR000362 Fumarate lyase family RD11_RS13730 IPR008948 L-Aspartase-like RD11_RS13730 IPR009049 Argininosuccinate lyase RD11_RS13730 IPR020557 Fumarate lyase, conserved site RD11_RS13730 IPR022761 Fumarate lyase, N-terminal RD11_RS13730 IPR024083 Fumarase/histidase, N-terminal RD11_RS13730 IPR029419 Argininosuccinate lyase, C-terminal RD11_RS13735 IPR000415 Nitroreductase-like RD11_RS13735 IPR026021 Putative NAD(P)H nitroreductase YdjA-like RD11_RS13735 IPR029479 Nitroreductase RD11_RS13740 IPR001584 Integrase, catalytic core RD11_RS13740 IPR009057 Homeodomain-like RD11_RS13740 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13740 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13740 IPR012337 Ribonuclease H-like domain RD11_RS13740 IPR024967 DNA-binding domain, IS481-type RD11_RS13745 IPR000847 Transcription regulator HTH, LysR RD11_RS13745 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS13745 IPR024370 PBP domain RD11_RS13750 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site RD11_RS13750 IPR006638 Elongator protein 3/MiaB/NifB RD11_RS13750 IPR007197 Radical SAM RD11_RS13750 IPR010505 Molybdenum cofactor synthesis C-terminal RD11_RS13750 IPR013483 Molybdenum cofactor biosynthesis protein A RD11_RS13750 IPR013785 Aldolase-type TIM barrel RD11_RS13755 IPR001453 Molybdopterin binding domain RD11_RS13755 IPR005110 MoeA, N-terminal and linker domain RD11_RS13755 IPR005111 MoeA, C-terminal, domain IV RD11_RS13755 IPR008284 Molybdenum cofactor biosynthesis, conserved site RD11_RS13760 IPR001453 Molybdopterin binding domain RD11_RS13760 IPR012245 Molybdenum cofactor biosynthesis protein MoaB RD11_RS13760 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria RD11_RS13765 IPR003448 Molybdopterin biosynthesis MoaE RD11_RS13770 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RD11_RS13770 IPR012675 Beta-grasp domain RD11_RS13770 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD11_RS13775 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RD11_RS13775 IPR023045 Molybdenum cofactor biosynthesis C RD11_RS13775 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type RD11_RS13780 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal RD11_RS13780 IPR008023 Protein of unknown function DUF748 RD11_RS13785 IPR002925 Dienelactone hydrolase RD11_RS13785 IPR029058 Alpha/Beta hydrolase fold RD11_RS13795 IPR012336 Thioredoxin-like fold RD11_RS13795 IPR013740 Redoxin RD11_RS13800 IPR011701 Major facilitator superfamily RD11_RS13800 IPR020846 Major facilitator superfamily domain RD11_RS13810 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RD11_RS13810 IPR006638 Elongator protein 3/MiaB/NifB RD11_RS13810 IPR007197 Radical SAM RD11_RS13810 IPR010722 Biotin and thiamin synthesis-associated domain RD11_RS13810 IPR013785 Aldolase-type TIM barrel RD11_RS13810 IPR024177 Biotin synthase RD11_RS13815 IPR025421 Protein of unknown function DUF4148 RD11_RS13820 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS13820 IPR009057 Homeodomain-like RD11_RS13820 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS13820 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS13825 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS13825 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS13830 IPR001757 Cation-transporting P-type ATPase RD11_RS13830 IPR006121 Heavy metal-associated domain, HMA RD11_RS13830 IPR008250 P-type ATPase, A domain RD11_RS13830 IPR018303 P-type ATPase, phosphorylation site RD11_RS13830 IPR023214 HAD-like domain RD11_RS13830 IPR023299 P-type ATPase, cytoplasmic domain N RD11_RS13830 IPR027256 Cation-transporting P-type ATPase, subfamily IB RD11_RS13835 IPR000551 MerR-type HTH domain RD11_RS13835 IPR009061 DNA binding domain, putative RD11_RS13835 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator RD11_RS13840 IPR001584 Integrase, catalytic core RD11_RS13840 IPR009057 Homeodomain-like RD11_RS13840 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13840 IPR012337 Ribonuclease H-like domain RD11_RS13840 IPR024967 DNA-binding domain, IS481-type RD11_RS13845 IPR001584 Integrase, catalytic core RD11_RS13845 IPR009057 Homeodomain-like RD11_RS13845 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13845 IPR012337 Ribonuclease H-like domain RD11_RS13845 IPR024967 DNA-binding domain, IS481-type RD11_RS13850 IPR002508 Cell wall hydrolase/autolysin, catalytic RD11_RS13850 IPR007709 N-formylglutamate amidohydrolase RD11_RS13850 IPR010247 N-formylglutamate deformylase RD11_RS13855 IPR002347 Glucose/ribitol dehydrogenase RD11_RS13855 IPR016040 NAD(P)-binding domain RD11_RS13860 IPR002994 Surfeit locus 1/Shy1 RD11_RS13865 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RD11_RS13865 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RD11_RS13870 IPR000298 Cytochrome c oxidase subunit III domain RD11_RS13870 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD11_RS13870 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RD11_RS13870 IPR024791 Cytochrome c oxidase subunit III RD11_RS13875 IPR000883 Cytochrome c oxidase subunit I RD11_RS13875 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RD11_RS13875 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD11_RS13875 IPR023616 Cytochrome c oxidase, subunit I domain RD11_RS13885 IPR005828 General substrate transporter RD11_RS13885 IPR005829 Sugar transporter, conserved site RD11_RS13885 IPR020846 Major facilitator superfamily domain RD11_RS13890 IPR001584 Integrase, catalytic core RD11_RS13890 IPR009057 Homeodomain-like RD11_RS13890 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13890 IPR012337 Ribonuclease H-like domain RD11_RS13890 IPR024967 DNA-binding domain, IS481-type RD11_RS13900 IPR007475 Membrane fusogenic activity RD11_RS13905 IPR002187 Nitrogen regulatory protein PII RD11_RS13905 IPR002332 Nitrogen regulatory protein P-II, urydylation site RD11_RS13905 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD11_RS13905 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RD11_RS13915 IPR003991 Pertactin virulence factor family RD11_RS13915 IPR003992 Pertactin RD11_RS13915 IPR004899 Pertactin, central region RD11_RS13915 IPR005546 Autotransporter beta-domain RD11_RS13915 IPR006315 Outer membrane autotransporter barrel RD11_RS13915 IPR011050 Pectin lyase fold/virulence factor RD11_RS13915 IPR012332 P22 tailspike C-terminal domain-like RD11_RS13925 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS13925 IPR009057 Homeodomain-like RD11_RS13925 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS13925 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS13930 IPR011701 Major facilitator superfamily RD11_RS13930 IPR020846 Major facilitator superfamily domain RD11_RS13935 IPR003439 ABC transporter-like RD11_RS13935 IPR003593 AAA+ ATPase domain RD11_RS13935 IPR017871 ABC transporter, conserved site RD11_RS13935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13935 IPR030660 RD11_RS13935 RD11_RS13940 IPR003439 ABC transporter-like RD11_RS13940 IPR003593 AAA+ ATPase domain RD11_RS13940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13940 IPR032823 RD11_RS13940 RD11_RS13945 IPR001851 ABC transporter, permease RD11_RS13950 IPR001851 ABC transporter, permease RD11_RS13955 IPR000709 Leu/Ile/Val-binding protein RD11_RS13955 IPR028081 Leucine-binding protein domain RD11_RS13955 IPR028082 Periplasmic binding protein-like I RD11_RS13960 IPR001584 Integrase, catalytic core RD11_RS13960 IPR009057 Homeodomain-like RD11_RS13960 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS13960 IPR012337 Ribonuclease H-like domain RD11_RS13960 IPR024967 DNA-binding domain, IS481-type RD11_RS13965 IPR002872 Proline dehydrogenase domain RD11_RS13965 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 RD11_RS13965 IPR010985 Ribbon-helix-helix RD11_RS13965 IPR015590 Aldehyde dehydrogenase domain RD11_RS13965 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS13965 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS13965 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS13965 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS13965 IPR024082 Proline dehydrogenase PutA, domain II RD11_RS13965 IPR024089 Proline dehydrogenase PutA, domain I/II RD11_RS13965 IPR024090 Proline dehydrogenase PutA, domain I RD11_RS13965 IPR025703 Bifunctional protein PutA RD11_RS13965 IPR029041 FAD-linked oxidoreductase-like RD11_RS13970 IPR005586 Protein of unknown function DUF330 RD11_RS13975 IPR003399 Mammalian cell entry-related RD11_RS13980 IPR005219 Conserved hypothetical protein CHP00155 RD11_RS13980 IPR007498 Paraquat-inducible protein A RD11_RS13985 IPR001270 ClpA/B family RD11_RS13985 IPR003593 AAA+ ATPase domain RD11_RS13985 IPR003959 ATPase, AAA-type, core RD11_RS13985 IPR004176 Clp, N-terminal RD11_RS13985 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA RD11_RS13985 IPR018368 ClpA/B, conserved site 1 RD11_RS13985 IPR019489 Clp ATPase, C-terminal RD11_RS13985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS13985 IPR028299 ClpA/B, conserved site 2 RD11_RS13990 IPR001264 Glycosyl transferase, family 51 RD11_RS13990 IPR001460 Penicillin-binding protein, transpeptidase RD11_RS13990 IPR009647 Penicillin-binding, C-terminal RD11_RS13990 IPR011815 Penicillin-binding protein 1C RD11_RS13990 IPR012338 Beta-lactamase/transpeptidase-like RD11_RS13990 IPR023346 Lysozyme-like domain RD11_RS13995 IPR001599 Alpha-2-macroglobulin RD11_RS13995 IPR002890 Alpha-2-macroglobulin, N-terminal RD11_RS13995 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RD11_RS13995 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RD11_RS13995 IPR011626 Alpha-macroglobulin complement component RD11_RS13995 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming RD11_RS13995 IPR021868 Alpha-2-macroglobulin MG1 domain RD11_RS13995 IPR026284 Alpha-2-macroglobulin domain protein, bacteria RD11_RS14000 IPR003769 Adaptor protein ClpS, core RD11_RS14000 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RD11_RS14000 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RD11_RS14005 IPR002059 Cold-shock protein, DNA-binding RD11_RS14005 IPR011129 Cold shock protein RD11_RS14005 IPR012156 Cold shock, CspA RD11_RS14005 IPR012340 Nucleic acid-binding, OB-fold RD11_RS14005 IPR019844 Cold-shock conserved site RD11_RS14010 IPR003795 Protein of unknown function DUF192 RD11_RS14015 IPR002155 Thiolase RD11_RS14015 IPR012793 Beta-ketoadipyl CoA thiolase RD11_RS14015 IPR016039 Thiolase-like RD11_RS14015 IPR020610 Thiolase, active site RD11_RS14015 IPR020613 Thiolase, conserved site RD11_RS14015 IPR020615 Thiolase, acyl-enzyme intermediate active site RD11_RS14015 IPR020616 Thiolase, N-terminal RD11_RS14015 IPR020617 Thiolase, C-terminal RD11_RS14020 IPR001807 Chloride channel, voltage gated RD11_RS14020 IPR014743 Chloride channel, core RD11_RS14025 IPR001189 Manganese/iron superoxide dismutase RD11_RS14025 IPR019831 Manganese/iron superoxide dismutase, N-terminal RD11_RS14025 IPR019832 Manganese/iron superoxide dismutase, C-terminal RD11_RS14025 IPR019833 Manganese/iron superoxide dismutase, binding site RD11_RS14030 IPR003753 Exonuclease VII, large subunit RD11_RS14030 IPR020579 Exonuclease VII, large subunit, C-terminal RD11_RS14030 IPR025824 OB-fold nucleic acid binding domain RD11_RS14035 IPR001584 Integrase, catalytic core RD11_RS14035 IPR009057 Homeodomain-like RD11_RS14035 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14035 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14035 IPR012337 Ribonuclease H-like domain RD11_RS14035 IPR024967 DNA-binding domain, IS481-type RD11_RS14040 IPR002898 MotA/TolQ/ExbB proton channel RD11_RS14045 IPR003400 Biopolymer transport protein ExbD/TolR RD11_RS14050 IPR003758 Tetraacyldisaccharide 4'-kinase RD11_RS14050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS14055 IPR005651 Uncharacterised protein family UPF0434/Trm112 RD11_RS14060 IPR003329 Acylneuraminate cytidylyltransferase RD11_RS14060 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase RD11_RS14060 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS14065 IPR000850 Adenylate kinase/UMP-CMP kinase RD11_RS14065 IPR006259 Adenylate kinase subfamily RD11_RS14065 IPR007862 Adenylate kinase, active site lid domain RD11_RS14065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS14070 IPR002347 Glucose/ribitol dehydrogenase RD11_RS14070 IPR016040 NAD(P)-binding domain RD11_RS14070 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS14075 IPR004268 Flagellin assembly, membrane protein MviN RD11_RS14080 IPR006860 FecR protein RD11_RS14080 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD11_RS14080 IPR032623 RD11_RS14080 RD11_RS14085 IPR002583 Ribosomal protein S20 RD11_RS14090 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD11_RS14090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS14090 IPR017648 2-dehydro-3-deoxyglucarate aldolase, GarL RD11_RS14100 IPR001584 Integrase, catalytic core RD11_RS14100 IPR009057 Homeodomain-like RD11_RS14100 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14100 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14100 IPR012337 Ribonuclease H-like domain RD11_RS14100 IPR024967 DNA-binding domain, IS481-type RD11_RS14105 IPR005064 Bordetella uptake gene RD11_RS14115 IPR003767 Malate/L-lactate dehydrogenase RD11_RS14120 IPR001584 Integrase, catalytic core RD11_RS14120 IPR009057 Homeodomain-like RD11_RS14120 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14120 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14120 IPR012337 Ribonuclease H-like domain RD11_RS14120 IPR024967 DNA-binding domain, IS481-type RD11_RS14125 IPR010305 Protein of unknown function DUF903 RD11_RS14125 IPR010920 Like-Sm (LSM) domain RD11_RS14130 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RD11_RS14130 IPR004450 Threonine synthase-like RD11_RS14130 IPR029144 Threonine synthase, N-terminal RD11_RS14135 IPR001342 Homoserine dehydrogenase, catalytic RD11_RS14135 IPR002912 ACT domain RD11_RS14135 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RD11_RS14135 IPR016040 NAD(P)-binding domain RD11_RS14135 IPR016204 Homoserine dehydrogenase RD11_RS14135 IPR019811 Homoserine dehydrogenase, conserved site RD11_RS14140 IPR004839 Aminotransferase, class I/classII RD11_RS14140 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS14140 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS14140 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS14145 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 RD11_RS14150 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD11_RS14150 IPR012336 Thioredoxin-like fold RD11_RS14150 IPR024706 Peroxiredoxin, AhpC-type RD11_RS14160 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA RD11_RS14160 IPR024084 Isopropylmalate dehydrogenase-like domain RD11_RS14165 IPR016833 Putative sodium bile acid cotransporter RD11_RS14170 IPR003593 AAA+ ATPase domain RD11_RS14170 IPR007692 DNA helicase, DnaB type RD11_RS14170 IPR007693 DNA helicase, DnaB-like, N-terminal RD11_RS14170 IPR007694 DNA helicase, DnaB-like, C-terminal RD11_RS14170 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RD11_RS14170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS14175 IPR011009 Protein kinase-like domain RD11_RS14180 IPR000244 Ribosomal protein L9 RD11_RS14180 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RD11_RS14180 IPR020069 Ribosomal protein L9, C-terminal RD11_RS14180 IPR020070 Ribosomal protein L9, N-terminal RD11_RS14180 IPR020594 Ribosomal protein L9, bacteria/chloroplast RD11_RS14185 IPR001648 Ribosomal protein S18 RD11_RS14185 IPR018275 Ribosomal protein S18, conserved site RD11_RS14190 IPR012340 Nucleic acid-binding, OB-fold RD11_RS14190 IPR023646 Primosomal replication protein PriB RD11_RS14195 IPR000529 Ribosomal protein S6 RD11_RS14195 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RD11_RS14195 IPR020814 Ribosomal protein S6, plastid/chloroplast RD11_RS14200 IPR003801 GTP cyclohydrolase FolE2/MptA RD11_RS14200 IPR022838 GTP cyclohydrolase FolE2 RD11_RS14205 IPR005474 Transketolase, N-terminal RD11_RS14205 IPR005475 Transketolase-like, pyrimidine-binding domain RD11_RS14205 IPR005477 Deoxyxylulose-5-phosphate synthase RD11_RS14205 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II RD11_RS14205 IPR020826 Transketolase binding site RD11_RS14205 IPR029061 Thiamin diphosphate-binding fold RD11_RS14205 IPR033247 RD11_RS14205 RD11_RS14205 IPR033248 RD11_RS14205 RD11_RS14210 IPR000092 Polyprenyl synthetase RD11_RS14210 IPR008949 Terpenoid synthase RD11_RS14210 IPR017446 Polyprenyl synthetase-related RD11_RS14215 IPR003761 Exonuclease VII, small subunit RD11_RS14220 IPR005471 Transcription regulator IclR, N-terminal RD11_RS14220 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14220 IPR014757 Transcription regulator IclR, C-terminal RD11_RS14220 IPR029016 GAF domain-like RD11_RS14225 IPR005064 Bordetella uptake gene RD11_RS14230 IPR002656 Acyltransferase 3 RD11_RS14235 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RD11_RS14235 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS14240 IPR001584 Integrase, catalytic core RD11_RS14240 IPR009057 Homeodomain-like RD11_RS14240 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14240 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14240 IPR012337 Ribonuclease H-like domain RD11_RS14240 IPR024967 DNA-binding domain, IS481-type RD11_RS14245 IPR000644 CBS domain RD11_RS14245 IPR006667 SLC41 divalent cation transporters, integral membrane domain RD11_RS14245 IPR006668 Magnesium transporter, MgtE intracellular domain RD11_RS14245 IPR006669 Magnesium transporter MgtE RD11_RS14250 IPR006683 Thioesterase superfamily RD11_RS14250 IPR029069 HotDog domain RD11_RS14255 IPR004630 Uncharacterised protein family UPF0324, bacteria RD11_RS14255 IPR018383 Uncharacterised protein family UPF0324, prokaryote RD11_RS14260 IPR000847 Transcription regulator HTH, LysR RD11_RS14260 IPR005119 LysR, substrate-binding RD11_RS14260 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14265 IPR002933 Peptidase M20 RD11_RS14265 IPR011650 Peptidase M20, dimerisation domain RD11_RS14265 IPR017439 Amidohydrolase RD11_RS14270 IPR000873 AMP-dependent synthetase/ligase RD11_RS14270 IPR020845 AMP-binding, conserved site RD11_RS14270 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS14275 IPR001584 Integrase, catalytic core RD11_RS14275 IPR009057 Homeodomain-like RD11_RS14275 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14275 IPR012337 Ribonuclease H-like domain RD11_RS14275 IPR024967 DNA-binding domain, IS481-type RD11_RS14280 IPR000760 Inositol monophosphatase RD11_RS14280 IPR020550 Inositol monophosphatase, conserved site RD11_RS14280 IPR020583 Inositol monophosphatase, metal-binding site RD11_RS14280 IPR022337 Inositol monophosphatase, SuhB RD11_RS14290 IPR000322 Glycoside hydrolase, family 31 RD11_RS14290 IPR011013 Galactose mutarotase-like domain RD11_RS14290 IPR017853 Glycoside hydrolase, superfamily RD11_RS14295 IPR003439 ABC transporter-like RD11_RS14295 IPR003593 AAA+ ATPase domain RD11_RS14295 IPR017871 ABC transporter, conserved site RD11_RS14295 IPR018449 NIL domain RD11_RS14295 IPR026253 Methionine import ATP-binding protein MetN RD11_RS14295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS14300 IPR000515 MetI-like domain RD11_RS14305 IPR004872 Lipoprotein NlpA family RD11_RS14315 IPR001584 Integrase, catalytic core RD11_RS14315 IPR009057 Homeodomain-like RD11_RS14315 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14315 IPR012337 Ribonuclease H-like domain RD11_RS14315 IPR024967 DNA-binding domain, IS481-type RD11_RS14320 IPR001670 Alcohol dehydrogenase, iron-type RD11_RS14320 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RD11_RS14325 IPR001584 Integrase, catalytic core RD11_RS14325 IPR009057 Homeodomain-like RD11_RS14325 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14325 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14325 IPR012337 Ribonuclease H-like domain RD11_RS14325 IPR024967 DNA-binding domain, IS481-type RD11_RS14330 IPR007138 Antibiotic biosynthesis monooxygenase-like domain RD11_RS14330 IPR011008 Dimeric alpha-beta barrel RD11_RS14335 IPR002840 Domain of unknown function DUF126 RD11_RS14335 IPR008279 PEP-utilising enzyme, mobile domain RD11_RS14335 IPR012016 Uncharacterised protein family UPF0107 RD11_RS14335 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS14340 IPR007506 Domain of unknown function DUF521 RD11_RS14345 IPR000524 Transcription regulator HTH, GntR RD11_RS14345 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS14345 IPR011711 GntR, C-terminal RD11_RS14345 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14350 IPR005064 Bordetella uptake gene RD11_RS14355 IPR001584 Integrase, catalytic core RD11_RS14355 IPR009057 Homeodomain-like RD11_RS14355 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14355 IPR012337 Ribonuclease H-like domain RD11_RS14355 IPR024967 DNA-binding domain, IS481-type RD11_RS14365 IPR005656 MmgE/PrpD RD11_RS14370 IPR005656 MmgE/PrpD RD11_RS14375 IPR000515 MetI-like domain RD11_RS14380 IPR000515 MetI-like domain RD11_RS14385 IPR003439 ABC transporter-like RD11_RS14385 IPR003593 AAA+ ATPase domain RD11_RS14385 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS14385 IPR017871 ABC transporter, conserved site RD11_RS14385 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS14390 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS14395 IPR001584 Integrase, catalytic core RD11_RS14395 IPR009057 Homeodomain-like RD11_RS14395 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14395 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14395 IPR012337 Ribonuclease H-like domain RD11_RS14395 IPR024967 DNA-binding domain, IS481-type RD11_RS14405 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14405 IPR029016 GAF domain-like RD11_RS14415 IPR000551 MerR-type HTH domain RD11_RS14415 IPR009061 DNA binding domain, putative RD11_RS14415 IPR010211 Redox-sensitive transcriptional activator SoxR RD11_RS14415 IPR015358 Transcription regulator MerR, DNA binding RD11_RS14420 IPR005019 Methyladenine glycosylase RD11_RS14420 IPR011257 DNA glycosylase RD11_RS14425 IPR007844 AsmA RD11_RS14430 IPR001584 Integrase, catalytic core RD11_RS14430 IPR009057 Homeodomain-like RD11_RS14430 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14430 IPR012337 Ribonuclease H-like domain RD11_RS14430 IPR024967 DNA-binding domain, IS481-type RD11_RS14435 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS14435 IPR009057 Homeodomain-like RD11_RS14435 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS14435 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS14435 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD11_RS14440 IPR002347 Glucose/ribitol dehydrogenase RD11_RS14440 IPR016040 NAD(P)-binding domain RD11_RS14460 IPR001584 Integrase, catalytic core RD11_RS14460 IPR009057 Homeodomain-like RD11_RS14460 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14460 IPR012337 Ribonuclease H-like domain RD11_RS14460 IPR024967 DNA-binding domain, IS481-type RD11_RS14475 IPR001584 Integrase, catalytic core RD11_RS14475 IPR009057 Homeodomain-like RD11_RS14475 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14475 IPR012337 Ribonuclease H-like domain RD11_RS14475 IPR024967 DNA-binding domain, IS481-type RD11_RS14480 IPR000847 Transcription regulator HTH, LysR RD11_RS14480 IPR005119 LysR, substrate-binding RD11_RS14480 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14485 IPR003700 Ketopantoate hydroxymethyltransferase RD11_RS14485 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS14490 IPR001702 Porin, Gram-negative type RD11_RS14490 IPR002299 Porin, Neisseria sp. type RD11_RS14490 IPR023614 Porin domain RD11_RS14495 IPR001584 Integrase, catalytic core RD11_RS14495 IPR009057 Homeodomain-like RD11_RS14495 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14495 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14495 IPR012337 Ribonuclease H-like domain RD11_RS14495 IPR024967 DNA-binding domain, IS481-type RD11_RS14500 IPR002347 Glucose/ribitol dehydrogenase RD11_RS14500 IPR016040 NAD(P)-binding domain RD11_RS14500 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS14505 IPR002347 Glucose/ribitol dehydrogenase RD11_RS14505 IPR016040 NAD(P)-binding domain RD11_RS14505 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS14510 IPR011701 Major facilitator superfamily RD11_RS14510 IPR020846 Major facilitator superfamily domain RD11_RS14515 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS14515 IPR029058 Alpha/Beta hydrolase fold RD11_RS14520 IPR000847 Transcription regulator HTH, LysR RD11_RS14520 IPR005119 LysR, substrate-binding RD11_RS14520 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14525 IPR000796 Aspartate/other aminotransferase RD11_RS14525 IPR004839 Aminotransferase, class I/classII RD11_RS14525 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS14525 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS14530 IPR003607 HD/PDEase domain RD11_RS14530 IPR006674 HD domain RD11_RS14535 IPR001757 Cation-transporting P-type ATPase RD11_RS14535 IPR006121 Heavy metal-associated domain, HMA RD11_RS14535 IPR006122 Heavy metal-associated domain, copper ion-binding RD11_RS14535 IPR008250 P-type ATPase, A domain RD11_RS14535 IPR017969 Heavy-metal-associated, conserved site RD11_RS14535 IPR018303 P-type ATPase, phosphorylation site RD11_RS14535 IPR023214 HAD-like domain RD11_RS14535 IPR023299 P-type ATPase, cytoplasmic domain N RD11_RS14535 IPR027256 Cation-transporting P-type ATPase, subfamily IB RD11_RS14540 IPR001584 Integrase, catalytic core RD11_RS14540 IPR009057 Homeodomain-like RD11_RS14540 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14540 IPR012337 Ribonuclease H-like domain RD11_RS14540 IPR024967 DNA-binding domain, IS481-type RD11_RS14545 IPR008579 Domain of unknown function DUF861, cupin-3 RD11_RS14545 IPR011051 RmlC-like cupin domain RD11_RS14545 IPR014710 RmlC-like jelly roll fold RD11_RS14550 IPR025870 Glyoxalase-like domain RD11_RS14550 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS14555 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS14555 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RD11_RS14555 IPR011032 GroES (chaperonin 10)-like RD11_RS14555 IPR013149 Alcohol dehydrogenase, C-terminal RD11_RS14555 IPR013154 Alcohol dehydrogenase GroES-like RD11_RS14555 IPR016040 NAD(P)-binding domain RD11_RS14555 IPR020843 Polyketide synthase, enoylreductase RD11_RS14560 IPR003736 Phenylacetic acid degradation-related domain RD11_RS14560 IPR006683 Thioesterase superfamily RD11_RS14560 IPR029069 HotDog domain RD11_RS14570 IPR003439 ABC transporter-like RD11_RS14570 IPR003593 AAA+ ATPase domain RD11_RS14570 IPR017871 ABC transporter, conserved site RD11_RS14570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS14575 IPR000515 MetI-like domain RD11_RS14580 IPR021259 Protein of unknown function DUF2817 RD11_RS14585 IPR000873 AMP-dependent synthetase/ligase RD11_RS14585 IPR020845 AMP-binding, conserved site RD11_RS14585 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS14590 IPR010300 Cysteine dioxygenase type I RD11_RS14590 IPR011051 RmlC-like cupin domain RD11_RS14590 IPR014710 RmlC-like jelly roll fold RD11_RS14595 IPR000485 AsnC-type HTH domain RD11_RS14595 IPR011008 Dimeric alpha-beta barrel RD11_RS14595 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14595 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS14595 IPR019888 Transcription regulator AsnC-type RD11_RS14600 IPR005064 Bordetella uptake gene RD11_RS14605 IPR001783 Lumazine-binding protein RD11_RS14605 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS14605 IPR023366 ATP synthase subunit alpha-like domain RD11_RS14605 IPR026017 Lumazine-binding domain RD11_RS14610 IPR000120 Amidase RD11_RS14610 IPR023631 Amidase signature domain RD11_RS14615 IPR001584 Integrase, catalytic core RD11_RS14615 IPR009057 Homeodomain-like RD11_RS14615 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14615 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14615 IPR012337 Ribonuclease H-like domain RD11_RS14615 IPR024967 DNA-binding domain, IS481-type RD11_RS14625 IPR000847 Transcription regulator HTH, LysR RD11_RS14625 IPR005119 LysR, substrate-binding RD11_RS14625 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14630 IPR011701 Major facilitator superfamily RD11_RS14630 IPR020846 Major facilitator superfamily domain RD11_RS14635 IPR002125 CMP/dCMP deaminase, zinc-binding RD11_RS14635 IPR016193 Cytidine deaminase-like RD11_RS14640 IPR002110 Ankyrin repeat RD11_RS14640 IPR020683 Ankyrin repeat-containing domain RD11_RS14645 IPR000847 Transcription regulator HTH, LysR RD11_RS14645 IPR005119 LysR, substrate-binding RD11_RS14645 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14650 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD11_RS14650 IPR013785 Aldolase-type TIM barrel RD11_RS14655 IPR001584 Integrase, catalytic core RD11_RS14655 IPR009057 Homeodomain-like RD11_RS14655 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14655 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14655 IPR012337 Ribonuclease H-like domain RD11_RS14655 IPR024967 DNA-binding domain, IS481-type RD11_RS14660 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RD11_RS14660 IPR013785 Aldolase-type TIM barrel RD11_RS14665 IPR003439 ABC transporter-like RD11_RS14665 IPR003593 AAA+ ATPase domain RD11_RS14665 IPR017871 ABC transporter, conserved site RD11_RS14665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS14675 IPR001851 ABC transporter, permease RD11_RS14680 IPR001851 ABC transporter, permease RD11_RS14685 IPR006175 YjgF/Yer057p/UK114 family RD11_RS14685 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS14690 IPR000873 AMP-dependent synthetase/ligase RD11_RS14690 IPR020845 AMP-binding, conserved site RD11_RS14690 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS14700 IPR005471 Transcription regulator IclR, N-terminal RD11_RS14700 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14700 IPR014757 Transcription regulator IclR, C-terminal RD11_RS14700 IPR029016 GAF domain-like RD11_RS14705 IPR002347 Glucose/ribitol dehydrogenase RD11_RS14705 IPR016040 NAD(P)-binding domain RD11_RS14710 IPR002509 Polysaccharide deacetylase RD11_RS14710 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD11_RS14715 IPR003439 ABC transporter-like RD11_RS14715 IPR003593 AAA+ ATPase domain RD11_RS14715 IPR017871 ABC transporter, conserved site RD11_RS14715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS14720 IPR000515 MetI-like domain RD11_RS14725 IPR015168 SsuA/THI5-like RD11_RS14735 IPR001753 Crotonase superfamily RD11_RS14735 IPR014748 Crontonase, C-terminal RD11_RS14735 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS14735 IPR029045 ClpP/crotonase-like domain RD11_RS14740 IPR003673 CoA-transferase family III RD11_RS14740 IPR023606 CoA-transferase family III domain RD11_RS14745 IPR000120 Amidase RD11_RS14745 IPR023631 Amidase signature domain RD11_RS14755 IPR000524 Transcription regulator HTH, GntR RD11_RS14755 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS14755 IPR011711 GntR, C-terminal RD11_RS14755 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14760 IPR001584 Integrase, catalytic core RD11_RS14760 IPR009057 Homeodomain-like RD11_RS14760 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14760 IPR012337 Ribonuclease H-like domain RD11_RS14760 IPR024967 DNA-binding domain, IS481-type RD11_RS14765 IPR002549 Uncharacterised protein family UPF0118 RD11_RS14770 IPR021413 Protein of unknown function DUF3053 RD11_RS14780 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase RD11_RS14780 IPR016174 Di-haem cytochrome, transmembrane RD11_RS14785 IPR002321 Cytochrome c, class II RD11_RS14785 IPR010980 Cytochrome c/b562 RD11_RS14785 IPR012127 Cytochrome c prime RD11_RS14785 IPR015984 Cytochrome c prime, subgroup RD11_RS14790 IPR000362 Fumarate lyase family RD11_RS14790 IPR004769 Adenylosuccinate lyase RD11_RS14790 IPR008948 L-Aspartase-like RD11_RS14790 IPR013539 Adenylosuccinate lyase PurB, C-terminal RD11_RS14790 IPR020557 Fumarate lyase, conserved site RD11_RS14790 IPR022761 Fumarate lyase, N-terminal RD11_RS14790 IPR024083 Fumarase/histidase, N-terminal RD11_RS14795 IPR004045 Glutathione S-transferase, N-terminal RD11_RS14795 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS14795 IPR012336 Thioredoxin-like fold RD11_RS14800 IPR002781 Transmembrane protein TauE like RD11_RS14805 IPR004506 tRNA-specific 2-thiouridylase RD11_RS14805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS14805 IPR023382 Adenine nucleotide alpha hydrolase-like domains RD11_RS14810 IPR000847 Transcription regulator HTH, LysR RD11_RS14810 IPR005119 LysR, substrate-binding RD11_RS14810 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14815 IPR005064 Bordetella uptake gene RD11_RS14820 IPR002508 Cell wall hydrolase/autolysin, catalytic RD11_RS14820 IPR007709 N-formylglutamate amidohydrolase RD11_RS14825 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RD11_RS14825 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RD11_RS14825 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RD11_RS14825 IPR016040 NAD(P)-binding domain RD11_RS14830 IPR012136 NADP transhydrogenase, beta subunit RD11_RS14830 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS14835 IPR009057 Homeodomain-like RD11_RS14835 IPR018060 DNA binding HTH domain, AraC-type RD11_RS14835 IPR018062 HTH domain AraC-type, conserved site RD11_RS14835 IPR020449 Transcription regulator HTH, AraC- type RD11_RS14840 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS14840 IPR010105 TonB-dependent siderophore receptor RD11_RS14840 IPR010917 TonB-dependent receptor, conserved site RD11_RS14840 IPR012910 TonB-dependent receptor, plug RD11_RS14845 IPR000801 Putative esterase RD11_RS14845 IPR029058 Alpha/Beta hydrolase fold RD11_RS14850 IPR004017 Cysteine-rich domain RD11_RS14850 IPR009051 Alpha-helical ferredoxin RD11_RS14850 IPR012257 Glycolate oxidase, iron-sulphur subunit RD11_RS14850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RD11_RS14850 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RD11_RS14855 IPR006094 FAD linked oxidase, N-terminal RD11_RS14855 IPR016164 FAD-linked oxidase-like, C-terminal RD11_RS14855 IPR016166 FAD-binding, type 2 RD11_RS14855 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS14855 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD11_RS14860 IPR004113 FAD-linked oxidase, C-terminal RD11_RS14860 IPR006094 FAD linked oxidase, N-terminal RD11_RS14860 IPR016164 FAD-linked oxidase-like, C-terminal RD11_RS14860 IPR016166 FAD-binding, type 2 RD11_RS14860 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS14860 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS14860 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD11_RS14865 IPR004113 FAD-linked oxidase, C-terminal RD11_RS14865 IPR006094 FAD linked oxidase, N-terminal RD11_RS14865 IPR016164 FAD-linked oxidase-like, C-terminal RD11_RS14865 IPR016166 FAD-binding, type 2 RD11_RS14865 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS14865 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS14865 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD11_RS14870 IPR008638 Filamentous haemagglutinin, N-terminal RD11_RS14870 IPR011050 Pectin lyase fold/virulence factor RD11_RS14870 IPR012334 Pectin lyase fold RD11_RS14870 IPR020974 Peptidase C80, RTX cysteine protease domain RD11_RS14870 IPR025157 Haemagluttinin repeat RD11_RS14875 IPR006218 DAHP synthetase I/KDSA RD11_RS14875 IPR006219 DHAP synthase, class 1 RD11_RS14875 IPR013785 Aldolase-type TIM barrel RD11_RS14880 IPR002510 TldD/PmbA RD11_RS14880 IPR025502 TldD RD11_RS14885 IPR001110 Uncharacterised protein family UPF0012, conserved site RD11_RS14885 IPR003010 Carbon-nitrogen hydrolase RD11_RS14890 IPR001801 Histone-like protein H-NS RD11_RS14890 IPR027444 Histone-like protein H-NS, C-terminal domain RD11_RS14895 IPR001584 Integrase, catalytic core RD11_RS14895 IPR009057 Homeodomain-like RD11_RS14895 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS14895 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14895 IPR012337 Ribonuclease H-like domain RD11_RS14895 IPR024967 DNA-binding domain, IS481-type RD11_RS14905 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS14905 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14905 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD11_RS14905 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS14905 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS14905 IPR014284 RNA polymerase sigma-70 like domain RD11_RS14910 IPR005297 Lipoprotein repeat RD11_RS14910 IPR014558 Uncharacterised conserved lipoprotein RD11_RS14915 IPR007551 Protein of unknown function DUF520 RD11_RS14920 IPR008457 Copper resistance D RD11_RS14925 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS14930 IPR011055 Duplicated hybrid motif RD11_RS14930 IPR016047 Peptidase M23 RD11_RS14930 IPR018392 LysM domain RD11_RS14935 IPR003370 Chromate transporter RD11_RS14935 IPR014047 Chromate transporter, long chain RD11_RS14940 IPR005625 PepSY-associated TM helix RD11_RS14945 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS14945 IPR012910 TonB-dependent receptor, plug RD11_RS14950 IPR021333 Protein of unknown function DUF2946 RD11_RS14955 IPR018740 Protein of unknown function DUF2282, integral membrane RD11_RS14960 IPR007801 Uncharacterised protein family UPF0276 RD11_RS14960 IPR013022 Xylose isomerase-like, TIM barrel domain RD11_RS14965 IPR018640 Protein of unknown function DUF2063 RD11_RS14970 IPR032808 RD11_RS14970 RD11_RS14980 IPR001845 HTH ArsR-type DNA-binding domain RD11_RS14980 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS14985 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RD11_RS14985 IPR014210 Cytochrome o ubiquinol oxidase subunit IV RD11_RS14990 IPR000298 Cytochrome c oxidase subunit III domain RD11_RS14990 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD11_RS14990 IPR014206 Cytochrome o ubiquinol oxidase, subunit III RD11_RS14990 IPR024791 Cytochrome c oxidase subunit III RD11_RS14995 IPR000883 Cytochrome c oxidase subunit I RD11_RS14995 IPR014207 Cytochrome o ubiquinol oxidase, subunit I RD11_RS14995 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD11_RS14995 IPR023616 Cytochrome c oxidase, subunit I domain RD11_RS15000 IPR002429 Cytochrome c oxidase subunit II C-terminal RD11_RS15000 IPR006333 Cytochrome o ubiquinol oxidase subunit II RD11_RS15000 IPR008972 Cupredoxin RD11_RS15000 IPR010514 COX aromatic rich motif RD11_RS15000 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RD11_RS15005 IPR001789 Signal transduction response regulator, receiver domain RD11_RS15005 IPR002197 DNA binding HTH domain, Fis-type RD11_RS15005 IPR009057 Homeodomain-like RD11_RS15005 IPR011006 CheY-like superfamily RD11_RS15010 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS15010 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS15010 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS15015 IPR025714 Methyltransferase domain RD11_RS15015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS15020 IPR003829 Pirin, N-terminal domain RD11_RS15020 IPR008778 Pirin, C-terminal domain RD11_RS15020 IPR011051 RmlC-like cupin domain RD11_RS15020 IPR012093 Pirin RD11_RS15020 IPR014710 RmlC-like jelly roll fold RD11_RS15030 IPR000847 Transcription regulator HTH, LysR RD11_RS15030 IPR005119 LysR, substrate-binding RD11_RS15030 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15035 IPR011701 Major facilitator superfamily RD11_RS15035 IPR020846 Major facilitator superfamily domain RD11_RS15040 IPR003673 CoA-transferase family III RD11_RS15040 IPR023606 CoA-transferase family III domain RD11_RS15045 IPR000847 Transcription regulator HTH, LysR RD11_RS15045 IPR005119 LysR, substrate-binding RD11_RS15045 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15050 IPR005064 Bordetella uptake gene RD11_RS15055 IPR029069 HotDog domain RD11_RS15060 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS15060 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS15070 IPR001584 Integrase, catalytic core RD11_RS15070 IPR009057 Homeodomain-like RD11_RS15070 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15070 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15070 IPR012337 Ribonuclease H-like domain RD11_RS15070 IPR024967 DNA-binding domain, IS481-type RD11_RS15075 IPR002125 CMP/dCMP deaminase, zinc-binding RD11_RS15075 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RD11_RS15075 IPR004794 Riboflavin biosynthesis protein RibD RD11_RS15075 IPR011549 Riboflavin-specific deaminase, C-terminal RD11_RS15075 IPR016192 APOBEC/CMP deaminase, zinc-binding RD11_RS15075 IPR016193 Cytidine deaminase-like RD11_RS15075 IPR024072 Dihydrofolate reductase-like domain RD11_RS15080 IPR000868 Isochorismatase-like RD11_RS15085 IPR002818 ThiJ/PfpI RD11_RS15085 IPR029062 Class I glutamine amidotransferase-like RD11_RS15090 IPR003796 Ribonucleotide reductase regulator NrdR-like RD11_RS15090 IPR005144 ATP-cone RD11_RS15095 IPR001085 Serine hydroxymethyltransferase RD11_RS15095 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS15095 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS15095 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS15095 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RD11_RS15100 IPR005247 YbhB/YbcL RD11_RS15100 IPR008914 Phosphatidylethanolamine-binding protein PEBP RD11_RS15105 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD11_RS15105 IPR002305 Aminoacyl-tRNA synthetase, class Ic RD11_RS15105 IPR002307 Tyrosine-tRNA ligase RD11_RS15105 IPR002942 RNA-binding S4 domain RD11_RS15105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS15105 IPR024088 Tyrosine-tRNA ligase, bacterial-type RD11_RS15105 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 RD11_RS15110 IPR001584 Integrase, catalytic core RD11_RS15110 IPR009057 Homeodomain-like RD11_RS15110 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15110 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15110 IPR012337 Ribonuclease H-like domain RD11_RS15110 IPR024967 DNA-binding domain, IS481-type RD11_RS15115 IPR011055 Duplicated hybrid motif RD11_RS15115 IPR016047 Peptidase M23 RD11_RS15120 IPR005338 Anhydro-N-acetylmuramic acid kinase RD11_RS15125 IPR000361 FeS cluster biogenesis RD11_RS15125 IPR016092 FeS cluster insertion protein RD11_RS15125 IPR017870 FeS cluster insertion, C-terminal, conserved site RD11_RS15125 IPR023063 Iron-sulfur cluster insertion protein ErpA RD11_RS15135 IPR000534 Semialdehyde dehydrogenase, NAD-binding RD11_RS15135 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RD11_RS15135 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RD11_RS15135 IPR016040 NAD(P)-binding domain RD11_RS15135 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RD11_RS15140 IPR000754 Ribosomal protein S9 RD11_RS15140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS15140 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS15140 IPR020574 Ribosomal protein S9, conserved site RD11_RS15140 IPR023035 Ribosomal protein S9, bacterial/plastid RD11_RS15145 IPR005822 Ribosomal protein L13 RD11_RS15145 IPR005823 Ribosomal protein L13, bacterial-type RD11_RS15145 IPR023564 Ribosomal protein L13 domain RD11_RS15150 IPR018389 Bacterial extracellular solute-binding protein, family 7 RD11_RS15150 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like RD11_RS15155 IPR002510 TldD/PmbA RD11_RS15160 IPR006839 Ribosome-associated, YjgA RD11_RS15160 IPR023153 PSPTO4464-like domain RD11_RS15165 IPR003140 Phospholipase/carboxylesterase/thioesterase RD11_RS15165 IPR029058 Alpha/Beta hydrolase fold RD11_RS15175 IPR003439 ABC transporter-like RD11_RS15175 IPR003593 AAA+ ATPase domain RD11_RS15175 IPR017871 ABC transporter, conserved site RD11_RS15175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15180 IPR000515 MetI-like domain RD11_RS15185 IPR000868 Isochorismatase-like RD11_RS15190 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD11_RS15190 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS15195 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD11_RS15195 IPR001650 Helicase, C-terminal RD11_RS15195 IPR005580 DbpA, RNA-binding RD11_RS15195 IPR011545 DEAD/DEAH box helicase domain RD11_RS15195 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS15195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15205 IPR000524 Transcription regulator HTH, GntR RD11_RS15205 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS15205 IPR011711 GntR, C-terminal RD11_RS15205 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15210 IPR001584 Integrase, catalytic core RD11_RS15210 IPR009057 Homeodomain-like RD11_RS15210 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15210 IPR012337 Ribonuclease H-like domain RD11_RS15210 IPR024967 DNA-binding domain, IS481-type RD11_RS15215 IPR000182 GNAT domain RD11_RS15215 IPR016102 Succinyl-CoA synthetase-like RD11_RS15215 IPR016181 Acyl-CoA N-acyltransferase RD11_RS15215 IPR032875 RD11_RS15215 RD11_RS15220 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RD11_RS15220 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD11_RS15220 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RD11_RS15220 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RD11_RS15220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS15220 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RD11_RS15220 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RD11_RS15220 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RD11_RS15225 IPR011701 Major facilitator superfamily RD11_RS15225 IPR020846 Major facilitator superfamily domain RD11_RS15235 IPR000485 AsnC-type HTH domain RD11_RS15235 IPR011008 Dimeric alpha-beta barrel RD11_RS15235 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15235 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS15235 IPR019888 Transcription regulator AsnC-type RD11_RS15245 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain RD11_RS15245 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS15245 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain RD11_RS15245 IPR029061 Thiamin diphosphate-binding fold RD11_RS15250 IPR000788 Ribonucleotide reductase large subunit, C-terminal RD11_RS15250 IPR005144 ATP-cone RD11_RS15250 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RD11_RS15250 IPR013346 Ribonucleotide reductase, class I , alpha subunit RD11_RS15250 IPR013509 Ribonucleotide reductase large subunit, N-terminal RD11_RS15255 IPR000358 Ribonucleotide reductase small subunit RD11_RS15255 IPR009078 Ferritin-like superfamily RD11_RS15255 IPR012348 Ribonucleotide reductase-related RD11_RS15260 IPR009970 Histone H1-like nucleoprotein HC2 RD11_RS15265 IPR003425 Uncharacterised protein family Ycf19 RD11_RS15270 IPR000873 AMP-dependent synthetase/ligase RD11_RS15270 IPR020845 AMP-binding, conserved site RD11_RS15275 IPR004299 Membrane bound O-acyl transferase, MBOAT RD11_RS15275 IPR024024 D-alanyl transfer protein DltB RD11_RS15275 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB RD11_RS15285 IPR006998 DltD, C-terminal RD11_RS15290 IPR009081 Acyl carrier protein-like RD11_RS15295 IPR008816 Glycine zipper 2TM domain RD11_RS15300 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RD11_RS15300 IPR011611 Carbohydrate kinase PfkB RD11_RS15300 IPR029056 Ribokinase-like RD11_RS15305 IPR011723 Zinc finger/thioredoxin putative RD11_RS15305 IPR021834 Protein of unknown function DUF3426 RD11_RS15310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS15315 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RD11_RS15315 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD11_RS15315 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal RD11_RS15315 IPR005482 Biotin carboxylase, C-terminal RD11_RS15315 IPR011054 Rudiment single hybrid motif RD11_RS15315 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS15315 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS15315 IPR016185 Pre-ATP-grasp domain RD11_RS15320 IPR000089 Biotin/lipoyl attachment RD11_RS15320 IPR001249 Acetyl-CoA biotin carboxyl carrier RD11_RS15320 IPR001882 Biotin-binding site RD11_RS15320 IPR011053 Single hybrid motif RD11_RS15325 IPR001874 Dehydroquinase, class II RD11_RS15325 IPR018509 Dehydroquinase, class II, conserved site RD11_RS15330 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RD11_RS15330 IPR012336 Thioredoxin-like fold RD11_RS15330 IPR017937 Thioredoxin, conserved site RD11_RS15335 IPR000713 Mur ligase, N-terminal RD11_RS15335 IPR004101 Mur ligase, C-terminal RD11_RS15335 IPR005757 Murein peptide ligase RD11_RS15335 IPR013221 Mur ligase, central RD11_RS15335 IPR016040 NAD(P)-binding domain RD11_RS15340 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RD11_RS15340 IPR029058 Alpha/Beta hydrolase fold RD11_RS15345 IPR012340 Nucleic acid-binding, OB-fold RD11_RS15350 IPR006260 TonB, C-terminal RD11_RS15355 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RD11_RS15355 IPR011342 Shikimate dehydrogenase RD11_RS15355 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RD11_RS15355 IPR016040 NAD(P)-binding domain RD11_RS15355 IPR022893 Shikimate, quinate/shikimate dehydrogenase RD11_RS15360 IPR001584 Integrase, catalytic core RD11_RS15360 IPR009057 Homeodomain-like RD11_RS15360 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15360 IPR012337 Ribonuclease H-like domain RD11_RS15360 IPR024967 DNA-binding domain, IS481-type RD11_RS15365 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP RD11_RS15365 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RD11_RS15370 IPR006840 ChaC-like protein RD11_RS15370 IPR013024 Butirosin biosynthesis, BtrG-like RD11_RS15375 IPR000485 AsnC-type HTH domain RD11_RS15375 IPR011008 Dimeric alpha-beta barrel RD11_RS15375 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15375 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RD11_RS15375 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS15375 IPR019888 Transcription regulator AsnC-type RD11_RS15380 IPR006076 FAD dependent oxidoreductase RD11_RS15380 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS15385 IPR002347 Glucose/ribitol dehydrogenase RD11_RS15385 IPR016040 NAD(P)-binding domain RD11_RS15390 IPR010300 Cysteine dioxygenase type I RD11_RS15390 IPR011051 RmlC-like cupin domain RD11_RS15390 IPR014710 RmlC-like jelly roll fold RD11_RS15395 IPR005064 Bordetella uptake gene RD11_RS15400 IPR025870 Glyoxalase-like domain RD11_RS15400 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS15405 IPR000185 Protein translocase subunit SecA RD11_RS15405 IPR004027 SEC-C motif RD11_RS15405 IPR011115 SecA DEAD-like, N-terminal RD11_RS15405 IPR011116 SecA Wing/Scaffold RD11_RS15405 IPR011130 SecA preprotein, cross-linking domain RD11_RS15405 IPR020937 SecA conserved site RD11_RS15405 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15410 IPR011055 Duplicated hybrid motif RD11_RS15410 IPR016047 Peptidase M23 RD11_RS15415 IPR021136 Flagellar hook-length control protein-like, C-terminal RD11_RS15420 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase RD11_RS15420 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal RD11_RS15420 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal RD11_RS15420 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS15425 IPR000158 Cell division protein FtsZ RD11_RS15425 IPR003008 Tubulin/FtsZ, GTPase domain RD11_RS15425 IPR008280 Tubulin/FtsZ, C-terminal RD11_RS15425 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RD11_RS15425 IPR024757 Cell division protein FtsZ, C-terminal RD11_RS15430 IPR003494 SHS2 domain inserted in FtsA RD11_RS15430 IPR020823 Cell division protein FtsA RD11_RS15435 IPR005548 Cell division protein FtsQ/DivIB RD11_RS15435 IPR013685 Polypeptide-transport-associated, FtsQ-type RD11_RS15435 IPR026579 Cell division protein FtsQ RD11_RS15440 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RD11_RS15440 IPR005905 D-alanine--D-alanine ligase RD11_RS15440 IPR011095 D-alanine--D-alanine ligase, C-terminal RD11_RS15440 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RD11_RS15440 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS15440 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS15440 IPR016185 Pre-ATP-grasp domain RD11_RS15445 IPR000713 Mur ligase, N-terminal RD11_RS15445 IPR004101 Mur ligase, C-terminal RD11_RS15445 IPR005758 UDP-N-acetylmuramate-alanine ligase RD11_RS15445 IPR013221 Mur ligase, central RD11_RS15445 IPR016040 NAD(P)-binding domain RD11_RS15450 IPR004276 Glycosyl transferase, family 28 RD11_RS15450 IPR006009 N-acetylglucosaminyltransferase, MurG RD11_RS15450 IPR007235 Glycosyl transferase, family 28, C-terminal RD11_RS15455 IPR001182 Cell cycle protein FtsW/RodA RD11_RS15455 IPR013437 Cell division protein FtsW RD11_RS15460 IPR004101 Mur ligase, C-terminal RD11_RS15460 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RD11_RS15460 IPR013221 Mur ligase, central RD11_RS15460 IPR016040 NAD(P)-binding domain RD11_RS15460 IPR018109 Folylpolyglutamate synthetase, conserved site RD11_RS15465 IPR000715 Glycosyl transferase, family 4 RD11_RS15465 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RD11_RS15465 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RD11_RS15470 IPR000713 Mur ligase, N-terminal RD11_RS15470 IPR004101 Mur ligase, C-terminal RD11_RS15470 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RD11_RS15470 IPR005863 UDP-MurNAc-pentapeptide synthetase RD11_RS15470 IPR013221 Mur ligase, central RD11_RS15470 IPR018109 Folylpolyglutamate synthetase, conserved site RD11_RS15475 IPR001460 Penicillin-binding protein, transpeptidase RD11_RS15475 IPR005311 Penicillin-binding protein, dimerisation domain RD11_RS15475 IPR012338 Beta-lactamase/transpeptidase-like RD11_RS15480 IPR011922 Cell division protein FtsL RD11_RS15485 IPR002903 Ribosomal RNA small subunit methyltransferase H RD11_RS15485 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain RD11_RS15485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS15490 IPR003444 MraZ RD11_RS15490 IPR020603 MraZ domain RD11_RS15500 IPR003439 ABC transporter-like RD11_RS15500 IPR003593 AAA+ ATPase domain RD11_RS15500 IPR017871 ABC transporter, conserved site RD11_RS15500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15500 IPR032524 RD11_RS15500 RD11_RS15500 IPR032781 RD11_RS15500 RD11_RS15505 IPR002195 Dihydroorotase, conserved site RD11_RS15505 IPR004721 Dihydroorotase homodimeric type RD11_RS15505 IPR006680 Amidohydrolase 1 RD11_RS15505 IPR032466 RD11_RS15505 RD11_RS15510 IPR002933 Peptidase M20 RD11_RS15510 IPR011650 Peptidase M20, dimerisation domain RD11_RS15510 IPR017439 Amidohydrolase RD11_RS15515 IPR003121 SWIB/MDM2 domain RD11_RS15515 IPR019835 SWIB domain RD11_RS15550 IPR000485 AsnC-type HTH domain RD11_RS15550 IPR011008 Dimeric alpha-beta barrel RD11_RS15550 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15550 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS15550 IPR019888 Transcription regulator AsnC-type RD11_RS15555 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RD11_RS15555 IPR005956 4-hydroxyphenylpyruvate dioxygenase RD11_RS15555 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RD11_RS15560 IPR002569 Peptide methionine sulphoxide reductase MsrA RD11_RS15560 IPR028427 Peptide methionine sulfoxide reductase RD11_RS15565 IPR002324 Cytochrome c, class ID RD11_RS15565 IPR009056 Cytochrome c-like domain RD11_RS15570 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RD11_RS15570 IPR004404 Dihydroxy-acid dehydratase RD11_RS15570 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS15570 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RD11_RS15575 IPR001640 Prolipoprotein diacylglyceryl transferase RD11_RS15580 IPR007497 Protein of unknown function DUF541 RD11_RS15585 IPR001584 Integrase, catalytic core RD11_RS15585 IPR009057 Homeodomain-like RD11_RS15585 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15585 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15585 IPR012337 Ribonuclease H-like domain RD11_RS15585 IPR024967 DNA-binding domain, IS481-type RD11_RS15595 IPR007838 Cell division protein ZapA-like RD11_RS15605 IPR001584 Integrase, catalytic core RD11_RS15605 IPR009057 Homeodomain-like RD11_RS15605 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15605 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15605 IPR012337 Ribonuclease H-like domain RD11_RS15605 IPR024967 DNA-binding domain, IS481-type RD11_RS15610 IPR009936 Protein of unknown function DUF1468 RD11_RS15615 IPR002823 Protein of unknown function DUF112, transmembrane RD11_RS15620 IPR000101 Gamma-glutamyltranspeptidase RD11_RS15620 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS15625 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RD11_RS15625 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RD11_RS15625 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS15625 IPR013328 Dehydrogenase, multihelical RD11_RS15625 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type RD11_RS15625 IPR016040 NAD(P)-binding domain RD11_RS15625 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RD11_RS15630 IPR003680 Flavodoxin-like fold RD11_RS15630 IPR029039 Flavoprotein-like RD11_RS15635 IPR001584 Integrase, catalytic core RD11_RS15635 IPR009057 Homeodomain-like RD11_RS15635 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15635 IPR012337 Ribonuclease H-like domain RD11_RS15635 IPR024967 DNA-binding domain, IS481-type RD11_RS15640 IPR001584 Integrase, catalytic core RD11_RS15640 IPR009057 Homeodomain-like RD11_RS15640 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15640 IPR012337 Ribonuclease H-like domain RD11_RS15640 IPR024967 DNA-binding domain, IS481-type RD11_RS15645 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like RD11_RS15645 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RD11_RS15650 IPR021647 Copper binding periplasmic protein CusF RD11_RS15655 IPR003593 AAA+ ATPase domain RD11_RS15655 IPR003959 ATPase, AAA-type, core RD11_RS15655 IPR004491 Heat shock protein HslU RD11_RS15655 IPR019489 Clp ATPase, C-terminal RD11_RS15655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15660 IPR001353 Proteasome, subunit alpha/beta RD11_RS15660 IPR022281 ATP-dependent protease, HslV subunit RD11_RS15660 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS15665 IPR000962 Zinc finger, DksA/TraR C4-type RD11_RS15665 IPR012784 RNA polymerase-binding transcription factor DksA RD11_RS15665 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RD11_RS15670 IPR003495 CobW/HypB/UreG domain RD11_RS15670 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RD11_RS15670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15675 IPR002481 Ferric-uptake regulator RD11_RS15675 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15685 IPR003439 ABC transporter-like RD11_RS15685 IPR003593 AAA+ ATPase domain RD11_RS15685 IPR017871 ABC transporter, conserved site RD11_RS15685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15690 IPR001626 ABC-3 RD11_RS15690 IPR029022 ABC transporter, BtuC-like RD11_RS15695 IPR006127 Periplasmic solute binding protein family RD11_RS15695 IPR006128 Adhesion lipoprotein RD11_RS15695 IPR006129 Adhesin B RD11_RS15700 IPR010412 Protein of unknown function DUF1007 RD11_RS15705 IPR011541 Nickel/cobalt transporter, high-affinity RD11_RS15710 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS15710 IPR012910 TonB-dependent receptor, plug RD11_RS15715 IPR002104 Integrase, catalytic RD11_RS15715 IPR004107 Integrase, SAM-like, N-terminal RD11_RS15715 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD11_RS15715 IPR011931 Tyrosine recombinase XerC RD11_RS15715 IPR013762 Integrase-like, catalytic core RD11_RS15715 IPR023009 Tyrosine recombinase XerC/XerD RD11_RS15715 IPR023109 Integrase/recombinase, N-terminal RD11_RS15720 IPR007435 Protein of unknown function DUF484 RD11_RS15725 IPR001653 Diaminopimelate epimerase, DapF RD11_RS15725 IPR018510 Diaminopimelate epimerase, active site RD11_RS15730 IPR004960 Bacterial lipid A biosynthesis acyltransferase RD11_RS15735 IPR004960 Bacterial lipid A biosynthesis acyltransferase RD11_RS15740 IPR002133 S-adenosylmethionine synthetase RD11_RS15740 IPR022628 S-adenosylmethionine synthetase, N-terminal RD11_RS15740 IPR022629 S-adenosylmethionine synthetase, central domain RD11_RS15740 IPR022630 S-adenosylmethionine synthetase, C-terminal RD11_RS15740 IPR022631 S-adenosylmethionine synthetase, conserved site RD11_RS15740 IPR022636 S-adenosylmethionine synthetase superfamily RD11_RS15745 IPR010710 Protein of unknown function DUF1289 RD11_RS15750 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS15755 IPR000043 Adenosylhomocysteinase RD11_RS15755 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD11_RS15755 IPR016040 NAD(P)-binding domain RD11_RS15755 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site RD11_RS15760 IPR007165 Membrane protein of unknown function RD11_RS15765 IPR003171 Methylenetetrahydrofolate reductase RD11_RS15765 IPR004620 5,10-methylenetetrahydrofolate reductase RD11_RS15765 IPR029041 FAD-linked oxidoreductase-like RD11_RS15770 IPR001584 Integrase, catalytic core RD11_RS15770 IPR009057 Homeodomain-like RD11_RS15770 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15770 IPR012337 Ribonuclease H-like domain RD11_RS15770 IPR024967 DNA-binding domain, IS481-type RD11_RS15775 IPR000847 Transcription regulator HTH, LysR RD11_RS15775 IPR005119 LysR, substrate-binding RD11_RS15775 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15780 IPR000286 Histone deacetylase superfamily RD11_RS15780 IPR023801 Histone deacetylase domain RD11_RS15785 IPR005828 General substrate transporter RD11_RS15785 IPR020846 Major facilitator superfamily domain RD11_RS15790 IPR002698 5-formyltetrahydrofolate cyclo-ligase RD11_RS15790 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RD11_RS15795 IPR008258 Lytic transglycosylase-like SLT domain RD11_RS15795 IPR008939 Lytic transglycosylase, superhelical U-shaped RD11_RS15795 IPR012289 Lytic transglycosylase, superhelical linker RD11_RS15795 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain RD11_RS15795 IPR023346 Lysozyme-like domain RD11_RS15800 IPR002646 Poly A polymerase, head domain RD11_RS15800 IPR012006 tRNA nucleotidyltransferase, proteobacteria RD11_RS15800 IPR032828 RD11_RS15800 RD11_RS15805 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RD11_RS15805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS15810 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site RD11_RS15810 IPR001650 Helicase, C-terminal RD11_RS15810 IPR011545 DEAD/DEAH box helicase domain RD11_RS15810 IPR012969 Fibrinogen binding protein RD11_RS15810 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS15810 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15815 IPR002043 Uracil-DNA glycosylase RD11_RS15815 IPR005122 Uracil-DNA glycosylase-like RD11_RS15815 IPR018085 Uracil-DNA glycosylase, active site RD11_RS15820 IPR001584 Integrase, catalytic core RD11_RS15820 IPR009057 Homeodomain-like RD11_RS15820 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15820 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15820 IPR012337 Ribonuclease H-like domain RD11_RS15820 IPR024967 DNA-binding domain, IS481-type RD11_RS15825 IPR001736 Phospholipase D/Transphosphatidylase RD11_RS15825 IPR025202 Phospholipase D-like domain RD11_RS15830 IPR003439 ABC transporter-like RD11_RS15830 IPR003593 AAA+ ATPase domain RD11_RS15830 IPR005116 Transport-associated OB, type 1 RD11_RS15830 IPR008995 Molybdate/tungstate binding, C-terminal RD11_RS15830 IPR011868 Molybdate ABC transporter, ATP-binding protein RD11_RS15830 IPR017871 ABC transporter, conserved site RD11_RS15830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15835 IPR000515 MetI-like domain RD11_RS15835 IPR011867 Molybdate ABC transporter, permease protein RD11_RS15840 IPR005950 Molybdenum ABC transporter, periplasmic binding protein RD11_RS15845 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS15845 IPR000639 Epoxide hydrolase-like RD11_RS15845 IPR029058 Alpha/Beta hydrolase fold RD11_RS15850 IPR010852 Protein of unknown function DUF1470 RD11_RS15850 IPR021005 Zinc finger, CGNR RD11_RS15850 IPR023286 ABATE domain RD11_RS15860 IPR025421 Protein of unknown function DUF4148 RD11_RS15880 IPR000485 AsnC-type HTH domain RD11_RS15880 IPR000524 Transcription regulator HTH, GntR RD11_RS15880 IPR011008 Dimeric alpha-beta barrel RD11_RS15880 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15880 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS15880 IPR019888 Transcription regulator AsnC-type RD11_RS15885 IPR001584 Integrase, catalytic core RD11_RS15885 IPR009057 Homeodomain-like RD11_RS15885 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS15885 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15885 IPR012337 Ribonuclease H-like domain RD11_RS15885 IPR024967 DNA-binding domain, IS481-type RD11_RS15890 IPR003959 ATPase, AAA-type, core RD11_RS15890 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15895 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class RD11_RS15895 IPR002941 DNA methylase N-4/N-6 RD11_RS15895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS15900 IPR006935 Helicase/UvrB domain RD11_RS15900 IPR011578 Restriction endonuclease, FokI, C-terminal/endonuclease I, core RD11_RS15900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15905 IPR003812 Fido domain RD11_RS15910 IPR002104 Integrase, catalytic RD11_RS15910 IPR004107 Integrase, SAM-like, N-terminal RD11_RS15910 IPR011010 DNA breaking-rejoining enzyme, catalytic core RD11_RS15910 IPR013762 Integrase-like, catalytic core RD11_RS15910 IPR023109 Integrase/recombinase, N-terminal RD11_RS15910 IPR025166 Domain of unknown function DUF4102 RD11_RS15915 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RD11_RS15915 IPR006073 GTP binding domain RD11_RS15915 IPR012675 Beta-grasp domain RD11_RS15915 IPR012676 TGS-like RD11_RS15915 IPR013029 Domain of unknown function DUF933 RD11_RS15915 IPR023192 TGS-like domain RD11_RS15915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS15920 IPR003675 CAAX amino terminal protease RD11_RS15925 IPR001328 Peptidyl-tRNA hydrolase RD11_RS15925 IPR018171 Peptidyl-tRNA hydrolase, conserved site RD11_RS15930 IPR001021 Ribosomal protein L25, long-form RD11_RS15930 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RD11_RS15930 IPR020055 Ribosomal protein L25, short-form RD11_RS15930 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RD11_RS15930 IPR020057 Ribosomal protein L25, beta domain RD11_RS15930 IPR029751 Ribosomal protein L25 RD11_RS15935 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RD11_RS15935 IPR005946 Ribose-phosphate diphosphokinase RD11_RS15935 IPR029057 Phosphoribosyltransferase-like RD11_RS15935 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RD11_RS15945 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RD11_RS15945 IPR006204 GHMP kinase N-terminal domain RD11_RS15945 IPR013750 GHMP kinase, C-terminal domain RD11_RS15945 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS15945 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS15950 IPR004565 Outer membrane lipoprotein LolB RD11_RS15950 IPR029046 Lipoprotein localisation LolA/LolB/LppX RD11_RS15955 IPR011990 Tetratricopeptide-like helical domain RD11_RS15955 IPR019734 Tetratricopeptide repeat RD11_RS15960 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase RD11_RS15960 IPR010979 Ribosomal protein S13-like, H2TH RD11_RS15960 IPR012319 DNA glycosylase/AP lyase, catalytic domain RD11_RS15960 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RD11_RS15960 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RD11_RS15960 IPR020629 Formamidopyrimidine-DNA glycosylase RD11_RS15965 IPR001279 Beta-lactamase-like RD11_RS15970 IPR002938 Monooxygenase, FAD-binding RD11_RS15970 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS15975 IPR021233 Protein of unknown function DUF2783 RD11_RS15980 IPR000847 Transcription regulator HTH, LysR RD11_RS15980 IPR005119 LysR, substrate-binding RD11_RS15980 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS15985 IPR005708 Homogentisate 1,2-dioxygenase RD11_RS15985 IPR011051 RmlC-like cupin domain RD11_RS15985 IPR014710 RmlC-like jelly roll fold RD11_RS15985 IPR022950 Homogentisate 1,2-dioxygenase, bacterial RD11_RS15990 IPR005959 Fumarylacetoacetase RD11_RS15990 IPR011234 Fumarylacetoacetase, C-terminal-related RD11_RS15990 IPR015377 Fumarylacetoacetase, N-terminal RD11_RS15995 IPR000917 Sulfatase RD11_RS15995 IPR012160 Membrane sulfatase, HI1246-related RD11_RS15995 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha RD11_RS15995 IPR017850 Alkaline-phosphatase-like, core domain RD11_RS16000 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS16000 IPR003660 HAMP linker domain RD11_RS16000 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS16005 IPR001789 Signal transduction response regulator, receiver domain RD11_RS16005 IPR001867 Signal transduction response regulator, C-terminal RD11_RS16005 IPR011006 CheY-like superfamily RD11_RS16005 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16010 IPR004113 FAD-linked oxidase, C-terminal RD11_RS16010 IPR006094 FAD linked oxidase, N-terminal RD11_RS16010 IPR016164 FAD-linked oxidase-like, C-terminal RD11_RS16010 IPR016166 FAD-binding, type 2 RD11_RS16010 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS16010 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS16010 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RD11_RS16015 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RD11_RS16015 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS16020 IPR005841 Alpha-D-phosphohexomutase superfamily RD11_RS16020 IPR005843 Alpha-D-phosphohexomutase, C-terminal RD11_RS16020 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RD11_RS16020 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RD11_RS16020 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RD11_RS16020 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RD11_RS16020 IPR016066 Alpha-D-phosphohexomutase, conserved site RD11_RS16025 IPR001672 Phosphoglucose isomerase (PGI) RD11_RS16025 IPR018189 Phosphoglucose isomerase, conserved site RD11_RS16025 IPR023096 Phosphoglucose isomerase, C-terminal RD11_RS16030 IPR001296 Glycosyl transferase, family 1 RD11_RS16030 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS16035 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS16040 IPR001296 Glycosyl transferase, family 1 RD11_RS16040 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS16045 IPR001962 Asparagine synthase RD11_RS16045 IPR006426 Asparagine synthase, glutamine-hydrolyzing RD11_RS16045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS16045 IPR017932 Glutamine amidotransferase type 2 domain RD11_RS16045 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS16050 IPR001296 Glycosyl transferase, family 1 RD11_RS16050 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS16055 IPR004268 Flagellin assembly, membrane protein MviN RD11_RS16060 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD11_RS16060 IPR008089 Nucleotide sugar epimerase RD11_RS16060 IPR016040 NAD(P)-binding domain RD11_RS16065 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD11_RS16065 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS16065 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD11_RS16065 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD11_RS16065 IPR016040 NAD(P)-binding domain RD11_RS16065 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD11_RS16065 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RD11_RS16070 IPR000715 Glycosyl transferase, family 4 RD11_RS16075 IPR009078 Ferritin-like superfamily RD11_RS16075 IPR011566 Ubiquinone biosynthesis protein Coq7 RD11_RS16075 IPR012347 Ferritin-related RD11_RS16080 IPR003718 OsmC/Ohr family RD11_RS16080 IPR015946 K homology domain-like, alpha/beta RD11_RS16085 IPR000398 Thymidylate synthase RD11_RS16085 IPR020940 Thymidylate synthase, active site RD11_RS16085 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RD11_RS16090 IPR001796 Dihydrofolate reductase domain RD11_RS16090 IPR012259 Dihydrofolate reductase RD11_RS16090 IPR017925 Dihydrofolate reductase conserved site RD11_RS16090 IPR024072 Dihydrofolate reductase-like domain RD11_RS16095 IPR000524 Transcription regulator HTH, GntR RD11_RS16095 IPR004839 Aminotransferase, class I/classII RD11_RS16095 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16095 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS16095 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS16100 IPR005814 Aminotransferase class-III RD11_RS16100 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS16100 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS16100 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS16105 IPR010061 Methylmalonate-semialdehyde dehydrogenase RD11_RS16105 IPR015590 Aldehyde dehydrogenase domain RD11_RS16105 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS16105 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS16105 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS16105 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS16110 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS16110 IPR030678 RD11_RS16110 RD11_RS16115 IPR000515 MetI-like domain RD11_RS16120 IPR000515 MetI-like domain RD11_RS16130 IPR009197 Microcystin LR degradation protein MlrC RD11_RS16130 IPR010799 Microcystin LR degradation protein MlrC, C-terminal RD11_RS16130 IPR015995 Microcystin LR degradation protein MlrC, N-terminal RD11_RS16135 IPR001584 Integrase, catalytic core RD11_RS16135 IPR009057 Homeodomain-like RD11_RS16135 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16135 IPR012337 Ribonuclease H-like domain RD11_RS16135 IPR024967 DNA-binding domain, IS481-type RD11_RS16140 IPR003495 CobW/HypB/UreG domain RD11_RS16140 IPR004400 Urease accessory protein UreG RD11_RS16140 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16145 IPR002639 Urease accessory protein UreF RD11_RS16150 IPR004029 UreE urease accessory, N-terminal RD11_RS16150 IPR007864 Urease accessory protein UreE, C-terminal domain RD11_RS16150 IPR012406 Urease accessory protein UreE RD11_RS16155 IPR005848 Urease, alpha subunit RD11_RS16155 IPR006680 Amidohydrolase 1 RD11_RS16155 IPR011059 Metal-dependent hydrolase, composite domain RD11_RS16155 IPR011612 Urease alpha-subunit, N-terminal domain RD11_RS16155 IPR017950 Urease active site RD11_RS16155 IPR029754 Urease nickel binding site RD11_RS16155 IPR032466 RD11_RS16155 RD11_RS16160 IPR002019 Urease, beta subunit RD11_RS16165 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RD11_RS16170 IPR002026 Urease, gamma/gamma-beta subunit RD11_RS16170 IPR012010 Urease, gamma subunit RD11_RS16175 IPR002669 Urease accessory protein UreD RD11_RS16180 IPR000551 MerR-type HTH domain RD11_RS16180 IPR009061 DNA binding domain, putative RD11_RS16180 IPR015358 Transcription regulator MerR, DNA binding RD11_RS16185 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS16185 IPR012675 Beta-grasp domain RD11_RS16185 IPR018298 Adrenodoxin, iron-sulphur binding site RD11_RS16190 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V RD11_RS16190 IPR011057 Mss4-like RD11_RS16200 IPR000524 Transcription regulator HTH, GntR RD11_RS16200 IPR011663 UbiC transcription regulator-associated RD11_RS16200 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16200 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS16205 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase RD11_RS16205 IPR006395 Methylaspartate ammonia-lyase RD11_RS16205 IPR022662 Methylaspartate ammonia-lyase, C-terminal RD11_RS16205 IPR022665 Methylaspartate ammonia-lyase, N-terminal RD11_RS16205 IPR029017 Enolase N-terminal domain-like RD11_RS16205 IPR029065 Enolase C-terminal domain-like RD11_RS16210 IPR005064 Bordetella uptake gene RD11_RS16215 IPR005656 MmgE/PrpD RD11_RS16220 IPR011701 Major facilitator superfamily RD11_RS16220 IPR020846 Major facilitator superfamily domain RD11_RS16225 IPR007390 Sporulation stage V, protein R RD11_RS16230 IPR002035 von Willebrand factor, type A RD11_RS16230 IPR006698 Thermus phage phiYS40, Orf56 RD11_RS16240 IPR001584 Integrase, catalytic core RD11_RS16240 IPR009057 Homeodomain-like RD11_RS16240 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16240 IPR012337 Ribonuclease H-like domain RD11_RS16240 IPR024967 DNA-binding domain, IS481-type RD11_RS16245 IPR002347 Glucose/ribitol dehydrogenase RD11_RS16245 IPR016040 NAD(P)-binding domain RD11_RS16250 IPR003673 CoA-transferase family III RD11_RS16250 IPR023606 CoA-transferase family III domain RD11_RS16255 IPR000873 AMP-dependent synthetase/ligase RD11_RS16255 IPR028154 AMP-dependent ligase, C-terminal RD11_RS16260 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS16260 IPR009057 Homeodomain-like RD11_RS16260 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS16260 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS16265 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS16265 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS16265 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS16265 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS16265 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS16270 IPR001851 ABC transporter, permease RD11_RS16275 IPR001851 ABC transporter, permease RD11_RS16280 IPR003439 ABC transporter-like RD11_RS16280 IPR003593 AAA+ ATPase domain RD11_RS16280 IPR017871 ABC transporter, conserved site RD11_RS16280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16285 IPR003439 ABC transporter-like RD11_RS16285 IPR003593 AAA+ ATPase domain RD11_RS16285 IPR017871 ABC transporter, conserved site RD11_RS16285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16285 IPR032823 RD11_RS16285 RD11_RS16290 IPR000709 Leu/Ile/Val-binding protein RD11_RS16290 IPR028081 Leucine-binding protein domain RD11_RS16290 IPR028082 Periplasmic binding protein-like I RD11_RS16295 IPR002347 Glucose/ribitol dehydrogenase RD11_RS16295 IPR016040 NAD(P)-binding domain RD11_RS16295 IPR020904 Short-chain dehydrogenase/reductase, conserved site RD11_RS16300 IPR001753 Crotonase superfamily RD11_RS16300 IPR014748 Crontonase, C-terminal RD11_RS16300 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS16300 IPR029045 ClpP/crotonase-like domain RD11_RS16305 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD11_RS16305 IPR012340 Nucleic acid-binding, OB-fold RD11_RS16305 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD11_RS16310 IPR002155 Thiolase RD11_RS16310 IPR016039 Thiolase-like RD11_RS16310 IPR020617 Thiolase, C-terminal RD11_RS16315 IPR002539 MaoC-like domain RD11_RS16315 IPR029069 HotDog domain RD11_RS16320 IPR016040 NAD(P)-binding domain RD11_RS16325 IPR001584 Integrase, catalytic core RD11_RS16325 IPR009057 Homeodomain-like RD11_RS16325 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16325 IPR012337 Ribonuclease H-like domain RD11_RS16325 IPR024967 DNA-binding domain, IS481-type RD11_RS16340 IPR005804 Fatty acid desaturase, type 1 RD11_RS16345 IPR016039 Thiolase-like RD11_RS16350 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal RD11_RS16350 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD11_RS16350 IPR016039 Thiolase-like RD11_RS16355 IPR001584 Integrase, catalytic core RD11_RS16355 IPR009057 Homeodomain-like RD11_RS16355 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16355 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16355 IPR012337 Ribonuclease H-like domain RD11_RS16355 IPR024967 DNA-binding domain, IS481-type RD11_RS16360 IPR002156 Ribonuclease H domain RD11_RS16360 IPR012337 Ribonuclease H-like domain RD11_RS16360 IPR022892 Ribonuclease H RD11_RS16365 IPR013216 Methyltransferase type 11 RD11_RS16365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS16370 IPR001279 Beta-lactamase-like RD11_RS16370 IPR017782 Hydroxyacylglutathione hydrolase RD11_RS16370 IPR032282 RD11_RS16370 RD11_RS16375 IPR000189 Prokaryotic transglycosylase, active site RD11_RS16375 IPR008258 Lytic transglycosylase-like SLT domain RD11_RS16375 IPR018392 LysM domain RD11_RS16375 IPR023346 Lysozyme-like domain RD11_RS16380 IPR002347 Glucose/ribitol dehydrogenase RD11_RS16380 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RD11_RS16380 IPR016040 NAD(P)-binding domain RD11_RS16385 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS16385 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS16390 IPR003718 OsmC/Ohr family RD11_RS16390 IPR015946 K homology domain-like, alpha/beta RD11_RS16395 IPR007486 Protein of unknown function DUF533 RD11_RS16395 IPR029024 TerB-like RD11_RS16400 IPR005064 Bordetella uptake gene RD11_RS16405 IPR001584 Integrase, catalytic core RD11_RS16405 IPR009057 Homeodomain-like RD11_RS16405 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16405 IPR012337 Ribonuclease H-like domain RD11_RS16405 IPR024967 DNA-binding domain, IS481-type RD11_RS16415 IPR001789 Signal transduction response regulator, receiver domain RD11_RS16415 IPR001867 Signal transduction response regulator, C-terminal RD11_RS16415 IPR011006 CheY-like superfamily RD11_RS16415 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16415 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS16420 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS16420 IPR003660 HAMP linker domain RD11_RS16420 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS16420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS16425 IPR003317 Cytochrome d ubiquinol oxidase, subunit II RD11_RS16430 IPR002585 Cytochrome d ubiquinol oxidase, subunit I RD11_RS16435 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RD11_RS16435 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RD11_RS16435 IPR004514 Glutamine-tRNA synthetase RD11_RS16435 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain RD11_RS16435 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS16435 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain RD11_RS16435 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RD11_RS16435 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain RD11_RS16435 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain RD11_RS16435 IPR022861 Glutamine-tRNA ligase, bacterial RD11_RS16440 IPR005526 Septum formation inhibitor MinC, C-terminal RD11_RS16440 IPR007874 Septum formation inhibitor MinC, N-terminal RD11_RS16440 IPR013033 Septum formation inhibitor MinC RD11_RS16440 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal RD11_RS16445 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RD11_RS16445 IPR010223 ATP binding protein MinD, bacterial-type RD11_RS16445 IPR025501 ATP binding protein MinD RD11_RS16445 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16450 IPR005527 Septum formation topological specificity factor MinE RD11_RS16455 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS16455 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS16460 IPR008816 Glycine zipper 2TM domain RD11_RS16465 IPR000868 Isochorismatase-like RD11_RS16470 IPR003439 ABC transporter-like RD11_RS16470 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16475 IPR000620 Drug/metabolite transporter RD11_RS16480 IPR000515 MetI-like domain RD11_RS16485 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS16485 IPR030678 RD11_RS16485 RD11_RS16490 IPR001173 Glycosyltransferase 2-like RD11_RS16490 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS16495 IPR000847 Transcription regulator HTH, LysR RD11_RS16495 IPR005119 LysR, substrate-binding RD11_RS16495 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16505 IPR003439 ABC transporter-like RD11_RS16505 IPR003593 AAA+ ATPase domain RD11_RS16505 IPR004602 UvrABC system subunit A RD11_RS16505 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS16505 IPR017871 ABC transporter, conserved site RD11_RS16505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16510 IPR005801 ADC synthase RD11_RS16510 IPR005802 Para-aminobenzoate synthase, component I RD11_RS16510 IPR015890 Chorismate binding, C-terminal RD11_RS16510 IPR019999 Anthranilate synthase component I - like RD11_RS16515 IPR001544 Aminotransferase, class IV RD11_RS16520 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS16520 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS16525 IPR002347 Glucose/ribitol dehydrogenase RD11_RS16525 IPR016040 NAD(P)-binding domain RD11_RS16530 IPR005064 Bordetella uptake gene RD11_RS16535 IPR000873 AMP-dependent synthetase/ligase RD11_RS16535 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS16540 IPR000524 Transcription regulator HTH, GntR RD11_RS16540 IPR011663 UbiC transcription regulator-associated RD11_RS16540 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16540 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS16545 IPR000594 UBA/THIF-type NAD/FAD binding fold RD11_RS16545 IPR016040 NAD(P)-binding domain RD11_RS16550 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG RD11_RS16550 IPR011701 Major facilitator superfamily RD11_RS16550 IPR020846 Major facilitator superfamily domain RD11_RS16555 IPR006840 ChaC-like protein RD11_RS16555 IPR013024 Butirosin biosynthesis, BtrG-like RD11_RS16560 IPR000659 Pyridoxamine 5'-phosphate oxidase RD11_RS16560 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain RD11_RS16560 IPR012349 FMN-binding split barrel RD11_RS16560 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RD11_RS16560 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RD11_RS16565 IPR002563 Flavin reductase-like, FMN-binding RD11_RS16565 IPR012349 FMN-binding split barrel RD11_RS16570 IPR006076 FAD dependent oxidoreductase RD11_RS16570 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS16575 IPR002376 Formyl transferase, N-terminal RD11_RS16575 IPR002912 ACT domain RD11_RS16575 IPR004810 Formyltetrahydrofolate deformylase RD11_RS16580 IPR000847 Transcription regulator HTH, LysR RD11_RS16580 IPR005119 LysR, substrate-binding RD11_RS16580 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16585 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS16585 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS16585 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS16590 IPR001584 Integrase, catalytic core RD11_RS16590 IPR009057 Homeodomain-like RD11_RS16590 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16590 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16590 IPR012337 Ribonuclease H-like domain RD11_RS16590 IPR024967 DNA-binding domain, IS481-type RD11_RS16595 IPR010621 Domain of unknown function DUF1214 RD11_RS16595 IPR010679 Domain of unknown function DUF1254 RD11_RS16595 IPR023289 VPA0735-like domain RD11_RS16605 IPR001584 Integrase, catalytic core RD11_RS16605 IPR009057 Homeodomain-like RD11_RS16605 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16605 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16605 IPR012337 Ribonuclease H-like domain RD11_RS16605 IPR024967 DNA-binding domain, IS481-type RD11_RS16610 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RD11_RS16610 IPR011060 Ribulose-phosphate binding barrel RD11_RS16610 IPR013785 Aldolase-type TIM barrel RD11_RS16610 IPR013798 Indole-3-glycerol phosphate synthase RD11_RS16615 IPR000312 Glycosyl transferase, family 3 RD11_RS16615 IPR005940 Anthranilate phosphoribosyl transferase RD11_RS16615 IPR017459 Glycosyl transferase family 3, N-terminal domain RD11_RS16620 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RD11_RS16620 IPR017926 Glutamine amidotransferase RD11_RS16620 IPR029062 Class I glutamine amidotransferase-like RD11_RS16625 IPR005256 Anthranilate synthase component I, PabB-like RD11_RS16625 IPR005801 ADC synthase RD11_RS16625 IPR006805 Anthranilate synthase component I, N-terminal RD11_RS16625 IPR015890 Chorismate binding, C-terminal RD11_RS16625 IPR019999 Anthranilate synthase component I - like RD11_RS16630 IPR006346 2-phosphoglycolate phosphatase, prokaryotic RD11_RS16630 IPR006439 HAD hydrolase, subfamily IA RD11_RS16630 IPR023198 Phosphoglycolate phosphatase, domain 2 RD11_RS16630 IPR023214 HAD-like domain RD11_RS16635 IPR000056 Ribulose-phosphate 3-epimerase-like RD11_RS16635 IPR011060 Ribulose-phosphate binding barrel RD11_RS16635 IPR013785 Aldolase-type TIM barrel RD11_RS16635 IPR026019 Ribulose-phosphate 3-epimerase RD11_RS16640 IPR007474 ApaG domain RD11_RS16640 IPR023065 Uncharacterised protein family ApaG RD11_RS16645 IPR005300 Lytic transglycosylase MltA RD11_RS16645 IPR009009 RlpA-like double-psi beta-barrel domain RD11_RS16645 IPR010611 3D domain RD11_RS16645 IPR026044 Membrane-bound lytic murein transglycosylase A RD11_RS16650 IPR002938 Monooxygenase, FAD-binding RD11_RS16650 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 RD11_RS16650 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site RD11_RS16650 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS16655 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RD11_RS16655 IPR012336 Thioredoxin-like fold RD11_RS16655 IPR017937 Thioredoxin, conserved site RD11_RS16655 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RD11_RS16660 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD11_RS16660 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD11_RS16660 IPR016040 NAD(P)-binding domain RD11_RS16660 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RD11_RS16665 IPR001584 Integrase, catalytic core RD11_RS16665 IPR009057 Homeodomain-like RD11_RS16665 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16665 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16665 IPR012337 Ribonuclease H-like domain RD11_RS16665 IPR024967 DNA-binding domain, IS481-type RD11_RS16670 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase RD11_RS16670 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA RD11_RS16670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS16675 IPR006156 Dihydroneopterin aldolase RD11_RS16675 IPR006157 Dihydroneopterin aldolase/epimerase domain RD11_RS16680 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD11_RS16680 IPR016040 NAD(P)-binding domain RD11_RS16680 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS16685 IPR001478 PDZ domain RD11_RS16685 IPR007963 Peptidase M61, catalytic domain RD11_RS16685 IPR024191 Peptidase M61 RD11_RS16690 IPR001753 Crotonase superfamily RD11_RS16690 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS16690 IPR029045 ClpP/crotonase-like domain RD11_RS16695 IPR010679 Domain of unknown function DUF1254 RD11_RS16695 IPR023289 VPA0735-like domain RD11_RS16700 IPR001584 Integrase, catalytic core RD11_RS16700 IPR009057 Homeodomain-like RD11_RS16700 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16700 IPR012337 Ribonuclease H-like domain RD11_RS16700 IPR024967 DNA-binding domain, IS481-type RD11_RS16705 IPR010621 Domain of unknown function DUF1214 RD11_RS16710 IPR005598 ATP synthase protein I RD11_RS16715 IPR000568 ATPase, F0 complex, subunit A RD11_RS16715 IPR023011 ATPase, F0 complex, subunit A, active site RD11_RS16720 IPR000454 ATPase, F0 complex, subunit C RD11_RS16720 IPR002379 V-ATPase proteolipid subunit C-like domain RD11_RS16720 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast RD11_RS16720 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RD11_RS16725 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast RD11_RS16725 IPR005864 ATPase, F0 complex, subunit B, bacterial RD11_RS16725 IPR028987 F-type ATP synthase subunit B-like, membrane domain RD11_RS16730 IPR000711 ATPase, OSCP/delta subunit RD11_RS16730 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RD11_RS16735 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD11_RS16735 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RD11_RS16735 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD11_RS16735 IPR005294 ATPase, F1 complex, alpha subunit RD11_RS16735 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD11_RS16735 IPR023366 ATP synthase subunit alpha-like domain RD11_RS16735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16740 IPR000131 ATPase, F1 complex, gamma subunit RD11_RS16740 IPR023632 ATPase, F1 complex, gamma subunit conserved site RD11_RS16740 IPR023633 ATPase, F1 complex, gamma subunit domain RD11_RS16745 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RD11_RS16745 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal RD11_RS16745 IPR003593 AAA+ ATPase domain RD11_RS16745 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain RD11_RS16745 IPR005722 ATPase, F1 complex, beta subunit RD11_RS16745 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RD11_RS16745 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal RD11_RS16745 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16750 IPR001469 ATPase, F1 complex, delta/epsilon subunit RD11_RS16750 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal RD11_RS16750 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain RD11_RS16755 IPR002197 DNA binding HTH domain, Fis-type RD11_RS16755 IPR009057 Homeodomain-like RD11_RS16760 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RD11_RS16760 IPR006361 Uroporphyrinogen decarboxylase HemE RD11_RS16765 IPR001650 Helicase, C-terminal RD11_RS16765 IPR005259 Primosomal protein n RD11_RS16765 IPR011545 DEAD/DEAH box helicase domain RD11_RS16765 IPR014001 Helicase, superfamily 1/2, ATP-binding domain RD11_RS16765 IPR024064 FdhE-like RD11_RS16765 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16770 IPR000212 DNA helicase, UvrD/REP type RD11_RS16770 IPR005752 DNA helicase, ATP-dependent, RepA type RD11_RS16770 IPR013986 DExx box DNA helicase domain RD11_RS16770 IPR014016 UvrD-like Helicase, ATP-binding domain RD11_RS16770 IPR014017 DNA helicase, UvrD-like, C-terminal RD11_RS16770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16775 IPR001584 Integrase, catalytic core RD11_RS16775 IPR009057 Homeodomain-like RD11_RS16775 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16775 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16775 IPR012337 Ribonuclease H-like domain RD11_RS16775 IPR024967 DNA-binding domain, IS481-type RD11_RS16780 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD11_RS16780 IPR002933 Peptidase M20 RD11_RS16780 IPR011650 Peptidase M20, dimerisation domain RD11_RS16780 IPR017150 Peptidase M20, glutamate carboxypeptidase RD11_RS16785 IPR029058 Alpha/Beta hydrolase fold RD11_RS16790 IPR003439 ABC transporter-like RD11_RS16790 IPR003593 AAA+ ATPase domain RD11_RS16790 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS16790 IPR017871 ABC transporter, conserved site RD11_RS16790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS16795 IPR000515 MetI-like domain RD11_RS16800 IPR000515 MetI-like domain RD11_RS16805 IPR007036 Succinylglutamate desuccinylase/aspartoacylase RD11_RS16820 IPR000631 YjeF C-terminal domain RD11_RS16820 IPR017953 Carbohydrate kinase, predicted, conserved site RD11_RS16820 IPR029056 Ribokinase-like RD11_RS16825 IPR001753 Crotonase superfamily RD11_RS16825 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS16825 IPR029045 ClpP/crotonase-like domain RD11_RS16830 IPR001753 Crotonase superfamily RD11_RS16830 IPR029045 ClpP/crotonase-like domain RD11_RS16835 IPR004136 2-nitropropane dioxygenase, NPD RD11_RS16835 IPR013785 Aldolase-type TIM barrel RD11_RS16840 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS16840 IPR009057 Homeodomain-like RD11_RS16840 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS16840 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS16840 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RD11_RS16845 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS16845 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS16845 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS16845 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS16845 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS16850 IPR003673 CoA-transferase family III RD11_RS16850 IPR023606 CoA-transferase family III domain RD11_RS16855 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD11_RS16855 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD11_RS16855 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS16855 IPR013328 Dehydrogenase, multihelical RD11_RS16855 IPR016040 NAD(P)-binding domain RD11_RS16855 IPR022694 3-hydroxyacyl-CoA dehydrogenase RD11_RS16860 IPR001584 Integrase, catalytic core RD11_RS16860 IPR009057 Homeodomain-like RD11_RS16860 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16860 IPR012337 Ribonuclease H-like domain RD11_RS16860 IPR024967 DNA-binding domain, IS481-type RD11_RS16870 IPR001584 Integrase, catalytic core RD11_RS16870 IPR009057 Homeodomain-like RD11_RS16870 IPR012337 Ribonuclease H-like domain RD11_RS16870 IPR024967 DNA-binding domain, IS481-type RD11_RS16875 IPR001584 Integrase, catalytic core RD11_RS16875 IPR009057 Homeodomain-like RD11_RS16875 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16875 IPR012337 Ribonuclease H-like domain RD11_RS16875 IPR024967 DNA-binding domain, IS481-type RD11_RS16880 IPR000923 Blue (type 1) copper domain RD11_RS16880 IPR008972 Cupredoxin RD11_RS16880 IPR028871 Blue (type 1) copper protein, binding site RD11_RS16885 IPR001117 Multicopper oxidase, type 1 RD11_RS16885 IPR002355 Multicopper oxidase, copper-binding site RD11_RS16885 IPR006376 Copper-resistance protein CopA RD11_RS16885 IPR008972 Cupredoxin RD11_RS16885 IPR011706 Multicopper oxidase, type 2 RD11_RS16885 IPR011707 Multicopper oxidase, type 3 RD11_RS16885 IPR033138 RD11_RS16885 RD11_RS16890 IPR007939 Copper resistance B precursor RD11_RS16895 IPR001753 Crotonase superfamily RD11_RS16895 IPR029045 ClpP/crotonase-like domain RD11_RS16910 IPR005471 Transcription regulator IclR, N-terminal RD11_RS16910 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16910 IPR014757 Transcription regulator IclR, C-terminal RD11_RS16910 IPR029016 GAF domain-like RD11_RS16915 IPR010300 Cysteine dioxygenase type I RD11_RS16915 IPR011051 RmlC-like cupin domain RD11_RS16915 IPR014710 RmlC-like jelly roll fold RD11_RS16920 IPR000120 Amidase RD11_RS16920 IPR023631 Amidase signature domain RD11_RS16925 IPR000709 Leu/Ile/Val-binding protein RD11_RS16925 IPR028081 Leucine-binding protein domain RD11_RS16925 IPR028082 Periplasmic binding protein-like I RD11_RS16930 IPR001584 Integrase, catalytic core RD11_RS16930 IPR009057 Homeodomain-like RD11_RS16930 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16930 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16930 IPR012337 Ribonuclease H-like domain RD11_RS16930 IPR024967 DNA-binding domain, IS481-type RD11_RS16935 IPR010419 Carbon monoxide dehydrogenase subunit G RD11_RS16935 IPR023393 START-like domain RD11_RS16945 IPR000620 Drug/metabolite transporter RD11_RS16950 IPR001736 Phospholipase D/Transphosphatidylase RD11_RS16950 IPR025202 Phospholipase D-like domain RD11_RS16950 IPR030872 RD11_RS16950 RD11_RS16955 IPR005135 Endonuclease/exonuclease/phosphatase RD11_RS16960 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RD11_RS16960 IPR004115 GAD-like domain RD11_RS16960 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RD11_RS16960 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RD11_RS16960 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type RD11_RS16960 IPR012340 Nucleic acid-binding, OB-fold RD11_RS16960 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like RD11_RS16960 IPR029351 GAD domain RD11_RS16965 IPR007462 Protein of unknown function DUF502 RD11_RS16970 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RD11_RS16975 IPR009978 Protein of unknown function DUF1504 RD11_RS16980 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RD11_RS16980 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RD11_RS16980 IPR012132 Glucose-methanol-choline oxidoreductase RD11_RS16980 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS16985 IPR001584 Integrase, catalytic core RD11_RS16985 IPR009057 Homeodomain-like RD11_RS16985 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS16985 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS16985 IPR012337 Ribonuclease H-like domain RD11_RS16985 IPR024967 DNA-binding domain, IS481-type RD11_RS16990 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS16990 IPR012910 TonB-dependent receptor, plug RD11_RS16995 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD11_RS16995 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RD11_RS16995 IPR005862 Phosphoribosylglycinamide formyltransferase 2 RD11_RS16995 IPR011054 Rudiment single hybrid motif RD11_RS16995 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS16995 IPR013816 ATP-grasp fold, subdomain 2 RD11_RS16995 IPR016185 Pre-ATP-grasp domain RD11_RS17000 IPR000644 CBS domain RD11_RS17000 IPR001347 Sugar isomerase (SIS) RD11_RS17000 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type RD11_RS17005 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RD11_RS17005 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase RD11_RS17005 IPR023214 HAD-like domain RD11_RS17010 IPR010664 Lipopolysaccharide assembly, LptC-related RD11_RS17010 IPR026265 Lipopolysaccharide export system protein LptC RD11_RS17015 IPR005653 Organic solvent tolerance-like, N-terminal RD11_RS17015 IPR014340 Lipopolysaccharide assembly, LptA RD11_RS17020 IPR003439 ABC transporter-like RD11_RS17020 IPR003593 AAA+ ATPase domain RD11_RS17020 IPR017871 ABC transporter, conserved site RD11_RS17020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS17020 IPR030921 RD11_RS17020 RD11_RS17020 IPR032823 RD11_RS17020 RD11_RS17025 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein RD11_RS17030 IPR002178 PTS EIIA type-2 domain RD11_RS17030 IPR016152 Phosphotransferase/anion transporter RD11_RS17035 IPR003755 HPr(Ser) kinase/phosphorylase RD11_RS17035 IPR011104 HPr kinase/phosphorylase, C-terminal RD11_RS17035 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal RD11_RS17035 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS17035 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like RD11_RS17040 IPR009056 Cytochrome c-like domain RD11_RS17040 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit RD11_RS17050 IPR005337 ATPase, P-loop-containing RD11_RS17050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS17055 IPR007730 Sporulation-related domain RD11_RS17055 IPR009009 RlpA-like double-psi beta-barrel domain RD11_RS17055 IPR012997 Rare lipoprotein A, bacterial RD11_RS17060 IPR001584 Integrase, catalytic core RD11_RS17060 IPR009057 Homeodomain-like RD11_RS17060 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17060 IPR012337 Ribonuclease H-like domain RD11_RS17060 IPR024967 DNA-binding domain, IS481-type RD11_RS17070 IPR010419 Carbon monoxide dehydrogenase subunit G RD11_RS17070 IPR023393 START-like domain RD11_RS17075 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RD11_RS17075 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RD11_RS17080 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS17080 IPR002888 [2Fe-2S]-binding RD11_RS17080 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS17080 IPR012675 Beta-grasp domain RD11_RS17085 IPR002346 Molybdopterin dehydrogenase, FAD-binding RD11_RS17085 IPR005107 CO dehydrogenase flavoprotein, C-terminal RD11_RS17085 IPR016166 FAD-binding, type 2 RD11_RS17085 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS17085 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS17090 IPR015168 SsuA/THI5-like RD11_RS17095 IPR005064 Bordetella uptake gene RD11_RS17100 IPR003382 Flavoprotein RD11_RS17100 IPR004507 Decarboxylase UbiX/Pad1 RD11_RS17105 IPR002109 Glutaredoxin RD11_RS17105 IPR004480 Monothiol glutaredoxin-related RD11_RS17105 IPR012336 Thioredoxin-like fold RD11_RS17105 IPR014434 Monothiol glutaredoxin RD11_RS17110 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RD11_RS17110 IPR004556 Modification methylase HemK RD11_RS17110 IPR007848 Methyltransferase small domain RD11_RS17110 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RD11_RS17110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS17115 IPR000352 Peptide chain release factor class I/class II RD11_RS17115 IPR004373 Peptide chain release factor 1 RD11_RS17115 IPR005139 Peptide chain release factor RD11_RS17115 IPR014720 Double-stranded RNA-binding domain RD11_RS17120 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RD11_RS17120 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RD11_RS17120 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RD11_RS17120 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RD11_RS17120 IPR016040 NAD(P)-binding domain RD11_RS17120 IPR018214 Glutamyl-tRNA reductase, conserved site RD11_RS17130 IPR001584 Integrase, catalytic core RD11_RS17130 IPR009057 Homeodomain-like RD11_RS17130 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17130 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17130 IPR012337 Ribonuclease H-like domain RD11_RS17130 IPR024967 DNA-binding domain, IS481-type RD11_RS17135 IPR001584 Integrase, catalytic core RD11_RS17135 IPR009057 Homeodomain-like RD11_RS17135 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17135 IPR012337 Ribonuclease H-like domain RD11_RS17135 IPR024967 DNA-binding domain, IS481-type RD11_RS17140 IPR006656 Molybdopterin oxidoreductase RD11_RS17140 IPR006657 Molydopterin dinucleotide-binding domain RD11_RS17140 IPR009010 Aspartate decarboxylase-like domain RD11_RS17145 IPR005471 Transcription regulator IclR, N-terminal RD11_RS17145 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17145 IPR014757 Transcription regulator IclR, C-terminal RD11_RS17145 IPR029016 GAF domain-like RD11_RS17150 IPR002020 Citrate synthase-like RD11_RS17150 IPR016142 Citrate synthase-like, large alpha subdomain RD11_RS17150 IPR016143 Citrate synthase-like, small alpha subdomain RD11_RS17155 IPR003781 CoA-binding RD11_RS17155 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS17155 IPR016040 NAD(P)-binding domain RD11_RS17155 IPR016102 Succinyl-CoA synthetase-like RD11_RS17155 IPR032875 RD11_RS17155 RD11_RS17160 IPR005064 Bordetella uptake gene RD11_RS17165 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS17165 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS17165 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS17165 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS17170 IPR001753 Crotonase superfamily RD11_RS17170 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RD11_RS17170 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RD11_RS17170 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS17170 IPR013328 Dehydrogenase, multihelical RD11_RS17170 IPR016040 NAD(P)-binding domain RD11_RS17170 IPR029045 ClpP/crotonase-like domain RD11_RS17175 IPR002155 Thiolase RD11_RS17175 IPR016039 Thiolase-like RD11_RS17175 IPR020613 Thiolase, conserved site RD11_RS17175 IPR020616 Thiolase, N-terminal RD11_RS17175 IPR020617 Thiolase, C-terminal RD11_RS17180 IPR000485 AsnC-type HTH domain RD11_RS17180 IPR011008 Dimeric alpha-beta barrel RD11_RS17180 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17180 IPR019887 Transcription regulator AsnC-type, C-terminal RD11_RS17180 IPR019888 Transcription regulator AsnC-type RD11_RS17185 IPR001347 Sugar isomerase (SIS) RD11_RS17185 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RD11_RS17185 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS17190 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain RD11_RS17190 IPR016040 NAD(P)-binding domain RD11_RS17195 IPR005064 Bordetella uptake gene RD11_RS17200 IPR015168 SsuA/THI5-like RD11_RS17205 IPR001753 Crotonase superfamily RD11_RS17205 IPR029045 ClpP/crotonase-like domain RD11_RS17210 IPR003781 CoA-binding RD11_RS17210 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS17210 IPR016040 NAD(P)-binding domain RD11_RS17210 IPR016102 Succinyl-CoA synthetase-like RD11_RS17210 IPR032875 RD11_RS17210 RD11_RS17215 IPR000847 Transcription regulator HTH, LysR RD11_RS17215 IPR005119 LysR, substrate-binding RD11_RS17215 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17220 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS17220 IPR011032 GroES (chaperonin 10)-like RD11_RS17220 IPR013149 Alcohol dehydrogenase, C-terminal RD11_RS17220 IPR014188 Acrylyl-CoA reductase AcuI RD11_RS17220 IPR016040 NAD(P)-binding domain RD11_RS17220 IPR020843 Polyketide synthase, enoylreductase RD11_RS17225 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS17230 IPR006175 YjgF/Yer057p/UK114 family RD11_RS17230 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS17235 IPR010430 Protein of unknown function DUF1028 RD11_RS17235 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS17240 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RD11_RS17240 IPR002933 Peptidase M20 RD11_RS17240 IPR010169 Acetylornithine deacetylase (ArgE) RD11_RS17240 IPR011650 Peptidase M20, dimerisation domain RD11_RS17245 IPR005064 Bordetella uptake gene RD11_RS17250 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS17250 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS17250 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS17250 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS17255 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS17255 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS17255 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS17255 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS17260 IPR006094 FAD linked oxidase, N-terminal RD11_RS17260 IPR012256 D-lactate dehydrogenase RD11_RS17260 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal RD11_RS17260 IPR016164 FAD-linked oxidase-like, C-terminal RD11_RS17260 IPR016166 FAD-binding, type 2 RD11_RS17260 IPR016167 FAD-binding, type 2, subdomain 1 RD11_RS17260 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 RD11_RS17260 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 RD11_RS17260 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 RD11_RS17265 IPR000847 Transcription regulator HTH, LysR RD11_RS17265 IPR005119 LysR, substrate-binding RD11_RS17265 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17270 IPR005064 Bordetella uptake gene RD11_RS17275 IPR007506 Domain of unknown function DUF521 RD11_RS17280 IPR002840 Domain of unknown function DUF126 RD11_RS17280 IPR008279 PEP-utilising enzyme, mobile domain RD11_RS17280 IPR012016 Uncharacterised protein family UPF0107 RD11_RS17280 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS17285 IPR001584 Integrase, catalytic core RD11_RS17285 IPR009057 Homeodomain-like RD11_RS17285 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17285 IPR012337 Ribonuclease H-like domain RD11_RS17285 IPR024967 DNA-binding domain, IS481-type RD11_RS17290 IPR001036 Acriflavin resistance protein RD11_RS17290 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD11_RS17295 IPR006054 DNA polymerase III, epsilon subunit RD11_RS17295 IPR006309 DNA polymerase 3, epsilon subunit RD11_RS17295 IPR012337 Ribonuclease H-like domain RD11_RS17295 IPR013520 Exonuclease, RNase T/DNA polymerase III RD11_RS17310 IPR006160 Short chain fatty acid transporter AtoE RD11_RS17315 IPR011852 TRAP transporter solute receptor, TAXI family RD11_RS17320 IPR004445 Sodium/glutamate symporter RD11_RS17325 IPR001584 Integrase, catalytic core RD11_RS17325 IPR009057 Homeodomain-like RD11_RS17325 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17325 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17325 IPR012337 Ribonuclease H-like domain RD11_RS17325 IPR024967 DNA-binding domain, IS481-type RD11_RS17330 IPR000182 GNAT domain RD11_RS17330 IPR016181 Acyl-CoA N-acyltransferase RD11_RS17335 IPR001173 Glycosyltransferase 2-like RD11_RS17335 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS17345 IPR002509 Polysaccharide deacetylase RD11_RS17345 IPR006879 Uncharacterised protein family UPF0249/HpnK RD11_RS17345 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RD11_RS17350 IPR007896 Transmembrane pair, bacterial RD11_RS17355 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS17355 IPR022742 Putative lysophospholipase RD11_RS17355 IPR029058 Alpha/Beta hydrolase fold RD11_RS17360 IPR001123 Lysine-type exporter protein (LYSE/YGGA) RD11_RS17365 IPR000620 Drug/metabolite transporter RD11_RS17370 IPR001584 Integrase, catalytic core RD11_RS17370 IPR009057 Homeodomain-like RD11_RS17370 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17370 IPR012337 Ribonuclease H-like domain RD11_RS17370 IPR024967 DNA-binding domain, IS481-type RD11_RS17375 IPR005064 Bordetella uptake gene RD11_RS17380 IPR011051 RmlC-like cupin domain RD11_RS17380 IPR014710 RmlC-like jelly roll fold RD11_RS17385 IPR005064 Bordetella uptake gene RD11_RS17390 IPR001763 Rhodanese-like domain RD11_RS17395 IPR000847 Transcription regulator HTH, LysR RD11_RS17395 IPR005119 LysR, substrate-binding RD11_RS17395 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17400 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS17400 IPR012000 Thiamine pyrophosphate enzyme, central domain RD11_RS17400 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RD11_RS17400 IPR029035 DHS-like NAD/FAD-binding domain RD11_RS17400 IPR029061 Thiamin diphosphate-binding fold RD11_RS17405 IPR003673 CoA-transferase family III RD11_RS17405 IPR023606 CoA-transferase family III domain RD11_RS17410 IPR001753 Crotonase superfamily RD11_RS17410 IPR029045 ClpP/crotonase-like domain RD11_RS17415 IPR005064 Bordetella uptake gene RD11_RS17415 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS17420 IPR001584 Integrase, catalytic core RD11_RS17420 IPR009057 Homeodomain-like RD11_RS17420 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17420 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17420 IPR012337 Ribonuclease H-like domain RD11_RS17420 IPR024967 DNA-binding domain, IS481-type RD11_RS17425 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II RD11_RS17425 IPR005982 Thioredoxin reductase RD11_RS17425 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RD11_RS17425 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS17430 IPR005471 Transcription regulator IclR, N-terminal RD11_RS17430 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17430 IPR014757 Transcription regulator IclR, C-terminal RD11_RS17430 IPR029016 GAF domain-like RD11_RS17435 IPR001307 Thiosulphate sulfurtransferase, conserved site RD11_RS17435 IPR001763 Rhodanese-like domain RD11_RS17440 IPR001763 Rhodanese-like domain RD11_RS17445 IPR011051 RmlC-like cupin domain RD11_RS17445 IPR014710 RmlC-like jelly roll fold RD11_RS17450 IPR003673 CoA-transferase family III RD11_RS17450 IPR023606 CoA-transferase family III domain RD11_RS17455 IPR005064 Bordetella uptake gene RD11_RS17460 IPR003673 CoA-transferase family III RD11_RS17460 IPR023606 CoA-transferase family III domain RD11_RS17465 IPR002109 Glutaredoxin RD11_RS17465 IPR012336 Thioredoxin-like fold RD11_RS17475 IPR001584 Integrase, catalytic core RD11_RS17475 IPR009057 Homeodomain-like RD11_RS17475 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17475 IPR012337 Ribonuclease H-like domain RD11_RS17475 IPR024967 DNA-binding domain, IS481-type RD11_RS17480 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RD11_RS17480 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RD11_RS17480 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17480 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RD11_RS17485 IPR000878 Tetrapyrrole methylase RD11_RS17485 IPR008189 rRNA small subunit methyltransferase I RD11_RS17485 IPR014776 Tetrapyrrole methylase, subdomain 2 RD11_RS17485 IPR014777 Tetrapyrrole methylase, subdomain 1 RD11_RS17485 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RD11_RS17490 IPR003509 Uncharacterised protein family UPF0102 RD11_RS17490 IPR011856 tRNA endonuclease-like domain RD11_RS17495 IPR001347 Sugar isomerase (SIS) RD11_RS17495 IPR004515 Phosphoheptose isomerase RD11_RS17500 IPR007055 BON domain RD11_RS17500 IPR014004 Transport-associated and nodulation domain, bacteria RD11_RS17505 IPR012336 Thioredoxin-like fold RD11_RS17505 IPR013740 Redoxin RD11_RS17510 IPR004872 Lipoprotein NlpA family RD11_RS17515 IPR001048 Aspartate/glutamate/uridylate kinase RD11_RS17515 IPR001057 Glutamate/acetylglutamate kinase RD11_RS17515 IPR004662 Acetylglutamate kinase RD11_RS17520 IPR006439 HAD hydrolase, subfamily IA RD11_RS17520 IPR010237 Pyrimidine 5-nucleotidase RD11_RS17520 IPR023214 HAD-like domain RD11_RS17525 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS17525 IPR009057 Homeodomain-like RD11_RS17525 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS17525 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS17530 IPR001898 Sodium/sulphate symporter RD11_RS17530 IPR030676 RD11_RS17530 RD11_RS17535 IPR003767 Malate/L-lactate dehydrogenase RD11_RS17540 IPR001182 Cell cycle protein FtsW/RodA RD11_RS17540 IPR011923 Rod shape-determining protein RodA RD11_RS17540 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RD11_RS17545 IPR001460 Penicillin-binding protein, transpeptidase RD11_RS17545 IPR005311 Penicillin-binding protein, dimerisation domain RD11_RS17545 IPR012338 Beta-lactamase/transpeptidase-like RD11_RS17545 IPR017790 Penicillin-binding protein 2 RD11_RS17550 IPR007227 Cell shape-determining protein MreD RD11_RS17550 IPR026034 Cell shape-determining protein MreD, proteobacterial type RD11_RS17555 IPR007221 Rod shape-determining protein MreC RD11_RS17560 IPR004753 Cell shape determining protein MreB/Mrl RD11_RS17565 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit RD11_RS17570 IPR000120 Amidase RD11_RS17570 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RD11_RS17570 IPR020556 Amidase, conserved site RD11_RS17570 IPR023631 Amidase signature domain RD11_RS17575 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related RD11_RS17575 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RD11_RS17575 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RD11_RS17575 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RD11_RS17575 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RD11_RS17575 IPR018027 Asn/Gln amidotransferase RD11_RS17575 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RD11_RS17580 IPR000836 Phosphoribosyltransferase domain RD11_RS17580 IPR004467 Orotate phosphoribosyl transferase domain RD11_RS17580 IPR023031 Orotate phosphoribosyltransferase RD11_RS17580 IPR029057 Phosphoribosyltransferase-like RD11_RS17585 IPR004808 AP endonuclease 1 RD11_RS17585 IPR005135 Endonuclease/exonuclease/phosphatase RD11_RS17585 IPR020847 AP endonuclease 1, binding site RD11_RS17590 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RD11_RS17590 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RD11_RS17590 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RD11_RS17590 IPR014362 Glutamate dehydrogenase RD11_RS17590 IPR016040 NAD(P)-binding domain RD11_RS17595 IPR005115 Uncharacterised domain UPF0126 RD11_RS17600 IPR006015 Universal stress protein A RD11_RS17600 IPR006016 UspA RD11_RS17600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS17605 IPR001584 Integrase, catalytic core RD11_RS17605 IPR009057 Homeodomain-like RD11_RS17605 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17605 IPR012337 Ribonuclease H-like domain RD11_RS17605 IPR024967 DNA-binding domain, IS481-type RD11_RS17610 IPR011045 Nitrous oxide reductase, N-terminal RD11_RS17610 IPR015943 WD40/YVTN repeat-like-containing domain RD11_RS17610 IPR019405 Lactonase, 7-bladed beta propeller RD11_RS17615 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS17620 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS17620 IPR001221 Phenol hydroxylase reductase RD11_RS17620 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS17620 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RD11_RS17620 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS17620 IPR008333 Oxidoreductase, FAD-binding domain RD11_RS17620 IPR012675 Beta-grasp domain RD11_RS17620 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS17625 IPR005624 Domain of unknown function DUF336 RD11_RS17630 IPR015590 Aldehyde dehydrogenase domain RD11_RS17630 IPR016160 Aldehyde dehydrogenase, cysteine active site RD11_RS17630 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS17630 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS17630 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS17630 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RD11_RS17635 IPR016084 Haem oxygenase-like, multi-helical RD11_RS17635 IPR028201 PqqC-like protein RD11_RS17645 IPR002781 Transmembrane protein TauE like RD11_RS17650 IPR000524 Transcription regulator HTH, GntR RD11_RS17650 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS17650 IPR011711 GntR, C-terminal RD11_RS17650 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17655 IPR001584 Integrase, catalytic core RD11_RS17655 IPR009057 Homeodomain-like RD11_RS17655 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17655 IPR012337 Ribonuclease H-like domain RD11_RS17655 IPR024967 DNA-binding domain, IS481-type RD11_RS17660 IPR003462 Ornithine cyclodeaminase/mu-crystallin RD11_RS17660 IPR016040 NAD(P)-binding domain RD11_RS17660 IPR023401 Ornithine cyclodeaminase, N-terminal RD11_RS17665 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS17665 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS17665 IPR012675 Beta-grasp domain RD11_RS17675 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS17675 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS17675 IPR012675 Beta-grasp domain RD11_RS17685 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS17685 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17685 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RD11_RS17685 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS17685 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS17685 IPR014284 RNA polymerase sigma-70 like domain RD11_RS17690 IPR006860 FecR protein RD11_RS17690 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component RD11_RS17690 IPR032623 RD11_RS17690 RD11_RS17695 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS17695 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor RD11_RS17695 IPR011276 TonB-dependent haem/haemoglobin receptor RD11_RS17695 IPR011662 Secretin/TonB, short N-terminal RD11_RS17695 IPR012910 TonB-dependent receptor, plug RD11_RS17700 IPR007845 Haemin-degrading HemS/ChuX domain RD11_RS17705 IPR002491 ABC transporter periplasmic binding domain RD11_RS17710 IPR000522 ABC transporter, permease protein RD11_RS17710 IPR029022 ABC transporter, BtuC-like RD11_RS17715 IPR003439 ABC transporter-like RD11_RS17715 IPR003593 AAA+ ATPase domain RD11_RS17715 IPR017871 ABC transporter, conserved site RD11_RS17715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS17720 IPR007553 Domain of unknown function DUF523 RD11_RS17725 IPR018655 Protein of unknown function DUF2086 RD11_RS17730 IPR004574 Alkylated DNA repair protein AlkB RD11_RS17730 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RD11_RS17735 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RD11_RS17735 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RD11_RS17735 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17735 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RD11_RS17740 IPR000160 GGDEF domain RD11_RS17740 IPR029787 Nucleotide cyclase RD11_RS17745 IPR021556 Protein of unknown function DUF2950 RD11_RS17750 IPR021728 Protein of unknown function DUF3300 RD11_RS17755 IPR005119 LysR, substrate-binding RD11_RS17765 IPR005064 Bordetella uptake gene RD11_RS17770 IPR001279 Beta-lactamase-like RD11_RS17775 IPR002155 Thiolase RD11_RS17775 IPR016039 Thiolase-like RD11_RS17780 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal RD11_RS17780 IPR012340 Nucleic acid-binding, OB-fold RD11_RS17780 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal RD11_RS17785 IPR005064 Bordetella uptake gene RD11_RS17790 IPR000873 AMP-dependent synthetase/ligase RD11_RS17790 IPR020845 AMP-binding, conserved site RD11_RS17790 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS17795 IPR011008 Dimeric alpha-beta barrel RD11_RS17800 IPR001584 Integrase, catalytic core RD11_RS17800 IPR009057 Homeodomain-like RD11_RS17800 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17800 IPR012337 Ribonuclease H-like domain RD11_RS17800 IPR024967 DNA-binding domain, IS481-type RD11_RS17805 IPR001264 Glycosyl transferase, family 51 RD11_RS17805 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase RD11_RS17805 IPR023346 Lysozyme-like domain RD11_RS17810 IPR005495 Permease YjgP/YjgQ, predicted RD11_RS17810 IPR030923 RD11_RS17810 RD11_RS17815 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) RD11_RS17815 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD11_RS17815 IPR029052 Metallo-dependent phosphatase-like RD11_RS17820 IPR002123 Phospholipid/glycerol acyltransferase RD11_RS17825 IPR006680 Amidohydrolase 1 RD11_RS17825 IPR011059 Metal-dependent hydrolase, composite domain RD11_RS17825 IPR032466 RD11_RS17825 RD11_RS17830 IPR002082 Aspartate carbamoyltransferase RD11_RS17830 IPR006130 Aspartate/ornithine carbamoyltransferase RD11_RS17830 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RD11_RS17830 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RD11_RS17835 IPR005227 Resolvase, holliday junction-type, YqgF-like RD11_RS17835 IPR006641 YqgF/RNase H-like domain RD11_RS17835 IPR012337 Ribonuclease H-like domain RD11_RS17840 IPR003774 Protein of unknown function UPF0301 RD11_RS17845 IPR004039 Rubredoxin-type fold RD11_RS17845 IPR018527 Rubredoxin, iron-binding site RD11_RS17845 IPR024922 Rubredoxin RD11_RS17845 IPR024935 Rubredoxin domain RD11_RS17850 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD11_RS17850 IPR029056 Ribokinase-like RD11_RS17855 IPR003733 Thiamine phosphate synthase RD11_RS17855 IPR013785 Aldolase-type TIM barrel RD11_RS17855 IPR022998 Thiamin phosphate synthase superfamily RD11_RS17860 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RD11_RS17860 IPR005814 Aminotransferase class-III RD11_RS17860 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS17860 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS17860 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS17865 IPR005646 Protein of unknown function DUF342 RD11_RS17870 IPR006175 YjgF/Yer057p/UK114 family RD11_RS17870 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RD11_RS17875 IPR029069 HotDog domain RD11_RS17880 IPR000873 AMP-dependent synthetase/ligase RD11_RS17880 IPR020845 AMP-binding, conserved site RD11_RS17880 IPR025110 AMP-binding enzyme C-terminal domain RD11_RS17885 IPR006089 Acyl-CoA dehydrogenase, conserved site RD11_RS17885 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RD11_RS17885 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RD11_RS17885 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain RD11_RS17885 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RD11_RS17890 IPR001753 Crotonase superfamily RD11_RS17890 IPR014748 Crontonase, C-terminal RD11_RS17890 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS17890 IPR029045 ClpP/crotonase-like domain RD11_RS17905 IPR003439 ABC transporter-like RD11_RS17905 IPR003593 AAA+ ATPase domain RD11_RS17905 IPR017871 ABC transporter, conserved site RD11_RS17905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS17910 IPR003439 ABC transporter-like RD11_RS17910 IPR003593 AAA+ ATPase domain RD11_RS17910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS17910 IPR032823 RD11_RS17910 RD11_RS17915 IPR001851 ABC transporter, permease RD11_RS17920 IPR001851 ABC transporter, permease RD11_RS17925 IPR028081 Leucine-binding protein domain RD11_RS17925 IPR028082 Periplasmic binding protein-like I RD11_RS17930 IPR013094 Alpha/beta hydrolase fold-3 RD11_RS17930 IPR029058 Alpha/Beta hydrolase fold RD11_RS17935 IPR000835 MarR-type HTH domain RD11_RS17935 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17935 IPR023187 Transcriptional regulator MarR-type, conserved site RD11_RS17945 IPR001584 Integrase, catalytic core RD11_RS17945 IPR009057 Homeodomain-like RD11_RS17945 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17945 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17945 IPR012337 Ribonuclease H-like domain RD11_RS17945 IPR024967 DNA-binding domain, IS481-type RD11_RS17955 IPR001584 Integrase, catalytic core RD11_RS17955 IPR009057 Homeodomain-like RD11_RS17955 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS17955 IPR012337 Ribonuclease H-like domain RD11_RS17955 IPR024967 DNA-binding domain, IS481-type RD11_RS17960 IPR010708 5'(3')-deoxyribonucleotidase RD11_RS17960 IPR023214 HAD-like domain RD11_RS17970 IPR000847 Transcription regulator HTH, LysR RD11_RS17970 IPR005119 LysR, substrate-binding RD11_RS17970 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS17975 IPR011701 Major facilitator superfamily RD11_RS17975 IPR020846 Major facilitator superfamily domain RD11_RS17980 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RD11_RS17980 IPR004404 Dihydroxy-acid dehydratase RD11_RS17980 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RD11_RS17980 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RD11_RS17985 IPR003313 AraC-type arabinose-binding/dimerisation domain RD11_RS17985 IPR009057 Homeodomain-like RD11_RS17985 IPR011051 RmlC-like cupin domain RD11_RS17985 IPR014710 RmlC-like jelly roll fold RD11_RS17985 IPR018060 DNA binding HTH domain, AraC-type RD11_RS17985 IPR020449 Transcription regulator HTH, AraC- type RD11_RS17990 IPR000891 Pyruvate carboxyltransferase RD11_RS17990 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RD11_RS17990 IPR013785 Aldolase-type TIM barrel RD11_RS17995 IPR003313 AraC-type arabinose-binding/dimerisation domain RD11_RS17995 IPR009057 Homeodomain-like RD11_RS17995 IPR011051 RmlC-like cupin domain RD11_RS17995 IPR014710 RmlC-like jelly roll fold RD11_RS17995 IPR018060 DNA binding HTH domain, AraC-type RD11_RS17995 IPR020449 Transcription regulator HTH, AraC- type RD11_RS18000 IPR002168 Lipase, GDXG, active site RD11_RS18000 IPR013094 Alpha/beta hydrolase fold-3 RD11_RS18000 IPR029058 Alpha/Beta hydrolase fold RD11_RS18005 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS18005 IPR030678 RD11_RS18005 RD11_RS18010 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RD11_RS18010 IPR016040 NAD(P)-binding domain RD11_RS18015 IPR007396 Transcriptional regulator PAI 2-type RD11_RS18015 IPR012349 FMN-binding split barrel RD11_RS18020 IPR001584 Integrase, catalytic core RD11_RS18020 IPR009057 Homeodomain-like RD11_RS18020 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS18020 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18020 IPR012337 Ribonuclease H-like domain RD11_RS18020 IPR024967 DNA-binding domain, IS481-type RD11_RS18025 IPR001478 PDZ domain RD11_RS18025 IPR001940 Peptidase S1C RD11_RS18025 IPR009003 Trypsin-like cysteine/serine peptidase domain RD11_RS18030 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RD11_RS18035 IPR001185 Large-conductance mechanosensitive channel RD11_RS18040 IPR005805 Rieske iron-sulphur protein, C-terminal RD11_RS18040 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit RD11_RS18040 IPR014349 Rieske iron-sulphur protein RD11_RS18040 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS18045 IPR005798 Cytochrome b/b6, C-terminal RD11_RS18045 IPR016174 Di-haem cytochrome, transmembrane RD11_RS18045 IPR027387 Cytochrome b/b6-like domain RD11_RS18050 IPR002326 Cytochrome c1 RD11_RS18050 IPR009056 Cytochrome c-like domain RD11_RS18055 IPR004045 Glutathione S-transferase, N-terminal RD11_RS18055 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS18055 IPR012336 Thioredoxin-like fold RD11_RS18060 IPR007481 Stringent starvation protein B RD11_RS18070 IPR013762 Integrase-like, catalytic core RD11_RS18075 IPR025319 Domain of unknown function DUF4224 RD11_RS18080 IPR001584 Integrase, catalytic core RD11_RS18080 IPR009057 Homeodomain-like RD11_RS18080 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS18080 IPR012337 Ribonuclease H-like domain RD11_RS18080 IPR024967 DNA-binding domain, IS481-type RD11_RS18085 IPR000489 Pterin-binding RD11_RS18085 IPR003726 Homocysteine S-methyltransferase RD11_RS18085 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RD11_RS18085 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RD11_RS18085 IPR006158 Cobalamin (vitamin B12)-binding domain RD11_RS18085 IPR011005 Dihydropteroate synthase-like RD11_RS18085 IPR011822 Cobalamin-dependent methionine synthase RD11_RS18090 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS18090 IPR012910 TonB-dependent receptor, plug RD11_RS18095 IPR002491 ABC transporter periplasmic binding domain RD11_RS18100 IPR008867 Thiazole biosynthesis RD11_RS18100 IPR013785 Aldolase-type TIM barrel RD11_RS18105 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RD11_RS18105 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RD11_RS18105 IPR029056 Ribokinase-like RD11_RS18110 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RD11_RS18110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS18115 IPR003423 Outer membrane efflux protein RD11_RS18120 IPR003423 Outer membrane efflux protein RD11_RS18120 IPR010130 Type I secretion outer membrane protein, TolC RD11_RS18125 IPR004821 Cytidyltransferase-like domain RD11_RS18125 IPR011914 RfaE bifunctional protein, domain II RD11_RS18125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS18130 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal RD11_RS18130 IPR003346 Transposase, IS116/IS110/IS902 RD11_RS18135 IPR002549 Uncharacterised protein family UPF0118 RD11_RS18140 IPR008775 Phytanoyl-CoA dioxygenase RD11_RS18145 IPR003148 Regulator of K+ conductance, N-terminal RD11_RS18145 IPR013099 Two pore domain potassium channel domain RD11_RS18145 IPR016040 NAD(P)-binding domain RD11_RS18150 IPR001584 Integrase, catalytic core RD11_RS18150 IPR009057 Homeodomain-like RD11_RS18150 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS18150 IPR012337 Ribonuclease H-like domain RD11_RS18150 IPR024967 DNA-binding domain, IS481-type RD11_RS18155 IPR005679 Ribosomal protein S12, bacteria RD11_RS18155 IPR006032 Ribosomal protein S12/S23 RD11_RS18155 IPR012340 Nucleic acid-binding, OB-fold RD11_RS18160 IPR000235 Ribosomal protein S5/S7 RD11_RS18160 IPR005717 Ribosomal protein S7, bacterial/organellar-type RD11_RS18160 IPR020606 Ribosomal protein S7, conserved site RD11_RS18160 IPR023798 Ribosomal protein S7 domain RD11_RS18165 IPR000640 Translation elongation factor EFG, V domain RD11_RS18165 IPR000795 Elongation factor, GTP-binding domain RD11_RS18165 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD11_RS18165 IPR004540 Translation elongation factor EFG/EF2 RD11_RS18165 IPR005225 Small GTP-binding protein domain RD11_RS18165 IPR005517 Translation elongation factor EFG/EF2, domain IV RD11_RS18165 IPR009000 Translation protein, beta-barrel domain RD11_RS18165 IPR009022 Elongation factor G, III-V domain RD11_RS18165 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS18165 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS18165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18165 IPR031157 RD11_RS18165 RD11_RS18170 IPR000795 Elongation factor, GTP-binding domain RD11_RS18170 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RD11_RS18170 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 RD11_RS18170 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RD11_RS18170 IPR005225 Small GTP-binding protein domain RD11_RS18170 IPR009000 Translation protein, beta-barrel domain RD11_RS18170 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RD11_RS18170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18170 IPR031157 RD11_RS18170 RD11_RS18175 IPR001848 Ribosomal protein S10 RD11_RS18175 IPR018268 Ribosomal protein S10, conserved site RD11_RS18175 IPR027486 Ribosomal protein S10 domain RD11_RS18180 IPR000597 Ribosomal protein L3 RD11_RS18180 IPR009000 Translation protein, beta-barrel domain RD11_RS18180 IPR019926 Ribosomal protein L3, conserved site RD11_RS18180 IPR019927 Ribosomal protein L3, bacterial/organelle-type RD11_RS18185 IPR002136 Ribosomal protein L4/L1e RD11_RS18185 IPR013005 Ribosomal protein L4/L1e, bacterial-type RD11_RS18185 IPR023574 Ribosomal protein L4 domain RD11_RS18190 IPR012677 Nucleotide-binding, alpha-beta plait RD11_RS18190 IPR012678 Ribosomal protein L23/L15e core domain RD11_RS18190 IPR013025 Ribosomal protein L25/L23 RD11_RS18195 IPR002171 Ribosomal protein L2 RD11_RS18195 IPR005880 Ribosomal protein L2, bacterial/organellar-type RD11_RS18195 IPR008991 Translation protein SH3-like domain RD11_RS18195 IPR012340 Nucleic acid-binding, OB-fold RD11_RS18195 IPR014722 Ribosomal protein L2 domain 2 RD11_RS18195 IPR014726 Ribosomal protein L2, domain 3 RD11_RS18195 IPR022666 Ribosomal Proteins L2, RNA binding domain RD11_RS18195 IPR022669 Ribosomal protein L2, C-terminal RD11_RS18195 IPR022671 Ribosomal protein L2, conserved site RD11_RS18200 IPR002222 Ribosomal protein S19/S15 RD11_RS18200 IPR005732 Ribosomal protein S19, bacterial-type RD11_RS18200 IPR020934 Ribosomal protein S19 conserved site RD11_RS18200 IPR023575 Ribosomal protein S19, superfamily RD11_RS18205 IPR001063 Ribosomal protein L22/L17 RD11_RS18205 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RD11_RS18205 IPR018260 Ribosomal protein L22/L17, conserved site RD11_RS18210 IPR001351 Ribosomal protein S3, C-terminal RD11_RS18210 IPR004044 K Homology domain, type 2 RD11_RS18210 IPR004087 K Homology domain RD11_RS18210 IPR005704 Ribosomal protein S3, bacterial RD11_RS18210 IPR009019 K homology domain, prokaryotic type RD11_RS18210 IPR015946 K homology domain-like, alpha/beta RD11_RS18210 IPR018280 Ribosomal protein S3, conserved site RD11_RS18215 IPR000114 Ribosomal protein L16 RD11_RS18215 IPR016180 Ribosomal protein L10e/L16 RD11_RS18215 IPR020798 Ribosomal protein L16, conserved site RD11_RS18220 IPR001854 Ribosomal protein L29 RD11_RS18220 IPR018254 Ribosomal protein L29, conserved site RD11_RS18225 IPR000266 Ribosomal protein S17 RD11_RS18225 IPR012340 Nucleic acid-binding, OB-fold RD11_RS18225 IPR019979 Ribosomal protein S17, conserved site RD11_RS18225 IPR019984 Ribosomal protein S17, bacterial-type RD11_RS18230 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS18230 IPR029058 Alpha/Beta hydrolase fold RD11_RS18235 IPR015590 Aldehyde dehydrogenase domain RD11_RS18235 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS18235 IPR016162 Aldehyde dehydrogenase, N-terminal RD11_RS18235 IPR016163 Aldehyde dehydrogenase, C-terminal RD11_RS18245 IPR000218 Ribosomal protein L14b/L23e RD11_RS18245 IPR005745 Ribosomal protein L14, bacterial-type RD11_RS18245 IPR019972 Ribosomal protein L14 conserved site RD11_RS18250 IPR003256 Ribosomal protein L24 RD11_RS18250 IPR005825 Ribosomal protein L24/L26, conserved site RD11_RS18250 IPR008991 Translation protein SH3-like domain RD11_RS18250 IPR014722 Ribosomal protein L2 domain 2 RD11_RS18255 IPR002132 Ribosomal protein L5 RD11_RS18255 IPR020929 Ribosomal protein L5, conserved site RD11_RS18255 IPR020930 Ribosomal protein L5, bacterial-type RD11_RS18255 IPR022803 Ribosomal protein L5 domain RD11_RS18255 IPR031309 RD11_RS18255 RD11_RS18255 IPR031310 RD11_RS18255 RD11_RS18260 IPR001209 Ribosomal protein S14 RD11_RS18260 IPR023036 Ribosomal protein S14, bacterial/plastid RD11_RS18265 IPR000630 Ribosomal protein S8 RD11_RS18270 IPR000702 Ribosomal protein L6 RD11_RS18270 IPR002358 Ribosomal protein L6, conserved site RD11_RS18270 IPR019906 Ribosomal protein L6, bacterial-type RD11_RS18270 IPR020040 Ribosomal protein L6, alpha-beta domain RD11_RS18275 IPR004389 Ribosomal protein L18, bacterial-type RD11_RS18275 IPR005484 Ribosomal protein L18/L5 RD11_RS18280 IPR000851 Ribosomal protein S5 RD11_RS18280 IPR005324 Ribosomal protein S5, C-terminal RD11_RS18280 IPR005712 Ribosomal protein S5, bacterial-type RD11_RS18280 IPR013810 Ribosomal protein S5, N-terminal RD11_RS18280 IPR014720 Double-stranded RNA-binding domain RD11_RS18280 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RD11_RS18280 IPR018192 Ribosomal protein S5, N-terminal, conserved site RD11_RS18280 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS18285 IPR005996 Ribosomal protein L30, bacterial-type RD11_RS18285 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RD11_RS18285 IPR018038 Ribosomal protein L30, conserved site RD11_RS18290 IPR005749 Ribosomal protein L15, bacterial-type RD11_RS18290 IPR021131 Ribosomal protein L18e/L15P RD11_RS18290 IPR030878 RD11_RS18290 RD11_RS18295 IPR002208 SecY/SEC61-alpha family RD11_RS18295 IPR023201 SecY subunit domain RD11_RS18295 IPR026593 Protein translocase subunit SecY RD11_RS18295 IPR030659 RD11_RS18295 RD11_RS18300 IPR004368 Translation initiation factor IF-1 RD11_RS18300 IPR006196 RNA-binding domain, S1, IF1 type RD11_RS18300 IPR012340 Nucleic acid-binding, OB-fold RD11_RS18305 IPR000473 Ribosomal protein L36 RD11_RS18310 IPR001892 Ribosomal protein S13 RD11_RS18310 IPR010979 Ribosomal protein S13-like, H2TH RD11_RS18310 IPR018269 Ribosomal protein S13, conserved site RD11_RS18310 IPR019980 Ribosomal protein S13, bacterial-type RD11_RS18310 IPR027437 30s ribosomal protein S13, C-terminal RD11_RS18315 IPR001971 Ribosomal protein S11 RD11_RS18315 IPR018102 Ribosomal S11, conserved site RD11_RS18315 IPR019981 Ribosomal protein S11, bacterial-type RD11_RS18320 IPR001912 Ribosomal protein S4/S9, N-terminal RD11_RS18320 IPR002942 RNA-binding S4 domain RD11_RS18320 IPR005709 Ribosomal protein S4, bacterial-type RD11_RS18320 IPR018079 Ribosomal protein S4, conserved site RD11_RS18320 IPR022801 Ribosomal protein S4/S9 RD11_RS18325 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain RD11_RS18325 IPR011260 RNA polymerase, alpha subunit, C-terminal RD11_RS18325 IPR011262 DNA-directed RNA polymerase, insert domain RD11_RS18325 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RD11_RS18325 IPR011773 DNA-directed RNA polymerase, alpha subunit RD11_RS18330 IPR000456 Ribosomal protein L17 RD11_RS18340 IPR004323 Divalent ion tolerance protein, CutA RD11_RS18340 IPR011322 Nitrogen regulatory PII-like, alpha/beta RD11_RS18345 IPR003834 Cytochrome c assembly protein, transmembrane domain RD11_RS18345 IPR012336 Thioredoxin-like fold RD11_RS18345 IPR017937 Thioredoxin, conserved site RD11_RS18345 IPR022910 Thiol:disulphide interchange protein DsbD RD11_RS18345 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RD11_RS18350 IPR000620 Drug/metabolite transporter RD11_RS18355 IPR001731 Porphobilinogen synthase RD11_RS18355 IPR013785 Aldolase-type TIM barrel RD11_RS18355 IPR030656 RD11_RS18355 RD11_RS18360 IPR006073 GTP binding domain RD11_RS18360 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RD11_RS18360 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18365 IPR009056 Cytochrome c-like domain RD11_RS18365 IPR024167 Cytochrome c4 RD11_RS18370 IPR007816 ResB-like domain RD11_RS18375 IPR002541 Cytochrome c assembly protein RD11_RS18375 IPR017562 Cytochrome c-type biogenesis protein CcsA RD11_RS18380 IPR000183 Ornithine/DAP/Arg decarboxylase RD11_RS18380 IPR002986 Diaminopimelate decarboxylase, LysA RD11_RS18380 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RD11_RS18380 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RD11_RS18380 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RD11_RS18380 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RD11_RS18380 IPR029066 PLP-binding barrel RD11_RS18385 IPR002908 Frataxin/CyaY RD11_RS18385 IPR020895 Frataxin conserved site RD11_RS18390 IPR001264 Glycosyl transferase, family 51 RD11_RS18390 IPR001460 Penicillin-binding protein, transpeptidase RD11_RS18390 IPR012338 Beta-lactamase/transpeptidase-like RD11_RS18390 IPR012340 Nucleic acid-binding, OB-fold RD11_RS18390 IPR023346 Lysozyme-like domain RD11_RS18390 IPR031376 RD11_RS18390 RD11_RS18395 IPR000623 Shikimate kinase/Threonine synthase-like 1 RD11_RS18395 IPR023000 Shikimate kinase, conserved site RD11_RS18395 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18395 IPR031322 RD11_RS18395 RD11_RS18400 IPR016037 3-dehydroquinate synthase AroB RD11_RS18400 IPR030960 RD11_RS18400 RD11_RS18400 IPR030963 RD11_RS18400 RD11_RS18405 IPR003607 HD/PDEase domain RD11_RS18405 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase RD11_RS18405 IPR006674 HD domain RD11_RS18405 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RD11_RS18405 IPR026875 Phosphohydrolase-associated domain RD11_RS18410 IPR004045 Glutathione S-transferase, N-terminal RD11_RS18410 IPR010987 Glutathione S-transferase, C-terminal-like RD11_RS18410 IPR012336 Thioredoxin-like fold RD11_RS18415 IPR004602 UvrABC system subunit A RD11_RS18415 IPR013815 ATP-grasp fold, subdomain 1 RD11_RS18415 IPR017871 ABC transporter, conserved site RD11_RS18415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18420 IPR011701 Major facilitator superfamily RD11_RS18420 IPR020846 Major facilitator superfamily domain RD11_RS18425 IPR000424 Primosome PriB/single-strand DNA-binding RD11_RS18425 IPR011344 Single-stranded DNA-binding protein RD11_RS18425 IPR012340 Nucleic acid-binding, OB-fold RD11_RS18430 IPR000531 TonB-dependent receptor, beta-barrel RD11_RS18430 IPR010105 TonB-dependent siderophore receptor RD11_RS18430 IPR012910 TonB-dependent receptor, plug RD11_RS18435 IPR011051 RmlC-like cupin domain RD11_RS18435 IPR014710 RmlC-like jelly roll fold RD11_RS18435 IPR025979 ChrR-like cupin domain RD11_RS18440 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD11_RS18440 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS18445 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RD11_RS18445 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain RD11_RS18450 IPR005064 Bordetella uptake gene RD11_RS18455 IPR000524 Transcription regulator HTH, GntR RD11_RS18455 IPR011663 UbiC transcription regulator-associated RD11_RS18455 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18455 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS18460 IPR000847 Transcription regulator HTH, LysR RD11_RS18460 IPR005119 LysR, substrate-binding RD11_RS18460 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18465 IPR006680 Amidohydrolase 1 RD11_RS18465 IPR011059 Metal-dependent hydrolase, composite domain RD11_RS18465 IPR032466 RD11_RS18465 RD11_RS18470 IPR005064 Bordetella uptake gene RD11_RS18475 IPR001296 Glycosyl transferase, family 1 RD11_RS18475 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS18480 IPR019647 PhoP regulatory network protein YrbL RD11_RS18485 IPR000847 Transcription regulator HTH, LysR RD11_RS18485 IPR005119 LysR, substrate-binding RD11_RS18485 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18490 IPR015168 SsuA/THI5-like RD11_RS18490 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RD11_RS18495 IPR000515 MetI-like domain RD11_RS18500 IPR003439 ABC transporter-like RD11_RS18500 IPR003593 AAA+ ATPase domain RD11_RS18500 IPR017871 ABC transporter, conserved site RD11_RS18500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18505 IPR006076 FAD dependent oxidoreductase RD11_RS18505 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS18515 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS18515 IPR009057 Homeodomain-like RD11_RS18515 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS18515 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS18520 IPR001465 Malate synthase RD11_RS18520 IPR006253 Malate synthase G RD11_RS18520 IPR011076 Malate synthase-like RD11_RS18520 IPR023310 Malate synthase G, beta sub-domain RD11_RS18525 IPR000524 Transcription regulator HTH, GntR RD11_RS18525 IPR008920 Transcription regulator FadR/GntR, C-terminal RD11_RS18525 IPR011711 GntR, C-terminal RD11_RS18525 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18530 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase RD11_RS18530 IPR016040 NAD(P)-binding domain RD11_RS18530 IPR032095 RD11_RS18530 RD11_RS18535 IPR025421 Protein of unknown function DUF4148 RD11_RS18540 IPR000537 UbiA prenyltransferase family RD11_RS18540 IPR006370 4-hydroxybenzoate polyprenyl transferase RD11_RS18540 IPR030470 RD11_RS18540 RD11_RS18540 IPR031103 RD11_RS18540 RD11_RS18545 IPR004839 Aminotransferase, class I/classII RD11_RS18545 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS18545 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS18545 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS18550 IPR003018 GAF domain RD11_RS18550 IPR029016 GAF domain-like RD11_RS18555 IPR002220 DapA-like RD11_RS18555 IPR013785 Aldolase-type TIM barrel RD11_RS18555 IPR020624 Dihydrodipicolinate synthetase, conserved site RD11_RS18555 IPR020625 Dihydrodipicolinate synthetase, active site RD11_RS18560 IPR001584 Integrase, catalytic core RD11_RS18560 IPR009057 Homeodomain-like RD11_RS18560 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS18560 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18560 IPR012337 Ribonuclease H-like domain RD11_RS18560 IPR024967 DNA-binding domain, IS481-type RD11_RS18565 IPR007055 BON domain RD11_RS18565 IPR018392 LysM domain RD11_RS18570 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RD11_RS18570 IPR010035 ThiS, thiamine-biosynthesis RD11_RS18570 IPR012675 Beta-grasp domain RD11_RS18570 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RD11_RS18575 IPR000073 Alpha/beta hydrolase fold-1 RD11_RS18575 IPR002410 Peptidase S33 RD11_RS18575 IPR005944 Proline iminopeptidase RD11_RS18575 IPR029058 Alpha/Beta hydrolase fold RD11_RS18580 IPR003358 tRNA (guanine-N-7) methyltransferase RD11_RS18580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS18585 IPR000847 Transcription regulator HTH, LysR RD11_RS18585 IPR005119 LysR, substrate-binding RD11_RS18585 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18595 IPR000891 Pyruvate carboxyltransferase RD11_RS18595 IPR013785 Aldolase-type TIM barrel RD11_RS18600 IPR005064 Bordetella uptake gene RD11_RS18610 IPR001584 Integrase, catalytic core RD11_RS18610 IPR009057 Homeodomain-like RD11_RS18610 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS18610 IPR012337 Ribonuclease H-like domain RD11_RS18610 IPR024967 DNA-binding domain, IS481-type RD11_RS18615 IPR000524 Transcription regulator HTH, GntR RD11_RS18615 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18615 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS18620 IPR005064 Bordetella uptake gene RD11_RS18625 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS18625 IPR015168 SsuA/THI5-like RD11_RS18630 IPR000524 Transcription regulator HTH, GntR RD11_RS18630 IPR011663 UbiC transcription regulator-associated RD11_RS18630 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18630 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RD11_RS18635 IPR000515 MetI-like domain RD11_RS18640 IPR015168 SsuA/THI5-like RD11_RS18645 IPR003439 ABC transporter-like RD11_RS18645 IPR003593 AAA+ ATPase domain RD11_RS18645 IPR017871 ABC transporter, conserved site RD11_RS18645 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18650 IPR001753 Crotonase superfamily RD11_RS18650 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS18650 IPR029045 ClpP/crotonase-like domain RD11_RS18655 IPR005064 Bordetella uptake gene RD11_RS18660 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS18660 IPR011032 GroES (chaperonin 10)-like RD11_RS18660 IPR013149 Alcohol dehydrogenase, C-terminal RD11_RS18660 IPR013154 Alcohol dehydrogenase GroES-like RD11_RS18660 IPR016040 NAD(P)-binding domain RD11_RS18660 IPR020843 Polyketide synthase, enoylreductase RD11_RS18665 IPR003673 CoA-transferase family III RD11_RS18665 IPR023606 CoA-transferase family III domain RD11_RS18670 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS18670 IPR009057 Homeodomain-like RD11_RS18670 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS18670 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS18675 IPR000086 NUDIX hydrolase domain RD11_RS18675 IPR015376 Zinc ribbon, NADH pyrophosphatase RD11_RS18675 IPR015797 NUDIX hydrolase domain-like RD11_RS18675 IPR020084 NUDIX hydrolase, conserved site RD11_RS18680 IPR000951 Phthalate dioxygenase reductase RD11_RS18680 IPR001041 2Fe-2S ferredoxin-type domain RD11_RS18680 IPR001433 Oxidoreductase FAD/NAD(P)-binding RD11_RS18680 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RD11_RS18680 IPR008333 Oxidoreductase, FAD-binding domain RD11_RS18680 IPR012675 Beta-grasp domain RD11_RS18680 IPR017938 Riboflavin synthase-like beta-barrel RD11_RS18685 IPR000120 Amidase RD11_RS18685 IPR023631 Amidase signature domain RD11_RS18690 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS18690 IPR016040 NAD(P)-binding domain RD11_RS18695 IPR000847 Transcription regulator HTH, LysR RD11_RS18695 IPR005119 LysR, substrate-binding RD11_RS18695 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18700 IPR000709 Leu/Ile/Val-binding protein RD11_RS18700 IPR028081 Leucine-binding protein domain RD11_RS18700 IPR028082 Periplasmic binding protein-like I RD11_RS18705 IPR009499 Protein of unknown function DUF1116 RD11_RS18705 IPR024033 Uncharacterised domain, YlbE RD11_RS18710 IPR003439 ABC transporter-like RD11_RS18710 IPR003593 AAA+ ATPase domain RD11_RS18710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18710 IPR032823 RD11_RS18710 RD11_RS18715 IPR001851 ABC transporter, permease RD11_RS18720 IPR001851 ABC transporter, permease RD11_RS18730 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RD11_RS18730 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RD11_RS18740 IPR011213 Nicotinic acid mononucleotide biosynthesis protein RD11_RS18740 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18740 IPR015797 NUDIX hydrolase domain-like RD11_RS18745 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RD11_RS18745 IPR004393 Nicotinate-nucleotide pyrophosphorylase RD11_RS18745 IPR013785 Aldolase-type TIM barrel RD11_RS18745 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal RD11_RS18745 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RD11_RS18750 IPR001584 Integrase, catalytic core RD11_RS18750 IPR009057 Homeodomain-like RD11_RS18750 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS18750 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18750 IPR012337 Ribonuclease H-like domain RD11_RS18750 IPR024967 DNA-binding domain, IS481-type RD11_RS18755 IPR001296 Glycosyl transferase, family 1 RD11_RS18755 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain RD11_RS18760 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RD11_RS18760 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like RD11_RS18760 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RD11_RS18760 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RD11_RS18760 IPR016040 NAD(P)-binding domain RD11_RS18760 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RD11_RS18760 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RD11_RS18765 IPR011701 Major facilitator superfamily RD11_RS18765 IPR020846 Major facilitator superfamily domain RD11_RS18770 IPR001451 Bacterial transferase hexapeptide repeat RD11_RS18770 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RD11_RS18770 IPR011004 Trimeric LpxA-like RD11_RS18770 IPR018357 Hexapeptide transferase, conserved site RD11_RS18770 IPR025877 MobA-like NTP transferase domain RD11_RS18770 IPR029044 Nucleotide-diphospho-sugar transferases RD11_RS18780 IPR008816 Glycine zipper 2TM domain RD11_RS18785 IPR022191 Protein of unknown function DUF3717 RD11_RS18790 IPR003782 Copper chaperone SCO1/SenC RD11_RS18790 IPR012336 Thioredoxin-like fold RD11_RS18795 IPR000537 UbiA prenyltransferase family RD11_RS18795 IPR006369 Protohaem IX farnesyltransferase RD11_RS18800 IPR003780 COX15/CtaA family RD11_RS18805 IPR012336 Thioredoxin-like fold RD11_RS18810 IPR002994 Surfeit locus 1/Shy1 RD11_RS18815 IPR021313 Protein of unknown function DUF2909 RD11_RS18820 IPR000298 Cytochrome c oxidase subunit III domain RD11_RS18820 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RD11_RS18820 IPR024791 Cytochrome c oxidase subunit III RD11_RS18825 IPR021344 Protein of unknown function DUF2970 RD11_RS18835 IPR000883 Cytochrome c oxidase subunit I RD11_RS18835 IPR014241 Cytochrome c oxidase, subunit I bacterial type RD11_RS18835 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RD11_RS18835 IPR023616 Cytochrome c oxidase, subunit I domain RD11_RS18840 IPR001505 Copper centre Cu(A) RD11_RS18840 IPR002429 Cytochrome c oxidase subunit II C-terminal RD11_RS18840 IPR008972 Cupredoxin RD11_RS18840 IPR009056 Cytochrome c-like domain RD11_RS18840 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RD11_RS18840 IPR014222 Cytochrome c oxidase, subunit II RD11_RS18845 IPR000086 NUDIX hydrolase domain RD11_RS18845 IPR015797 NUDIX hydrolase domain-like RD11_RS18850 IPR000595 Cyclic nucleotide-binding domain RD11_RS18850 IPR006153 Cation/H+ exchanger RD11_RS18850 IPR014710 RmlC-like jelly roll fold RD11_RS18850 IPR018422 Cation/H+ exchanger, CPA1 family RD11_RS18850 IPR018490 Cyclic nucleotide-binding-like RD11_RS18855 IPR004843 Calcineurin-like phosphoesterase domain, apaH type RD11_RS18855 IPR013622 Calcineurin-like phosphoesterase C-terminal RD11_RS18855 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RD11_RS18855 IPR029052 Metallo-dependent phosphatase-like RD11_RS18860 IPR000943 RNA polymerase sigma-70 RD11_RS18860 IPR007627 RNA polymerase sigma-70 region 2 RD11_RS18860 IPR007630 RNA polymerase sigma-70 region 4 RD11_RS18860 IPR009042 RNA polymerase sigma-70 region 1.2 RD11_RS18860 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS18860 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria RD11_RS18860 IPR013324 RNA polymerase sigma factor, region 3/4 RD11_RS18860 IPR013325 RNA polymerase sigma factor, region 2 RD11_RS18860 IPR014284 RNA polymerase sigma-70 like domain RD11_RS18860 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE RD11_RS18870 IPR000801 Putative esterase RD11_RS18870 IPR014186 S-formylglutathione hydrolase RD11_RS18870 IPR029058 Alpha/Beta hydrolase fold RD11_RS18875 IPR002085 Alcohol dehydrogenase superfamily, zinc-type RD11_RS18875 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RD11_RS18875 IPR011032 GroES (chaperonin 10)-like RD11_RS18875 IPR013149 Alcohol dehydrogenase, C-terminal RD11_RS18875 IPR013154 Alcohol dehydrogenase GroES-like RD11_RS18875 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase RD11_RS18875 IPR016040 NAD(P)-binding domain RD11_RS18875 IPR020843 Polyketide synthase, enoylreductase RD11_RS18880 IPR002686 Transposase IS200-like RD11_RS18885 IPR002489 Glutamate synthase, alpha subunit, C-terminal RD11_RS18885 IPR002932 Glutamate synthase domain RD11_RS18885 IPR006982 Glutamate synthase, central-N RD11_RS18885 IPR013785 Aldolase-type TIM barrel RD11_RS18885 IPR017932 Glutamine amidotransferase type 2 domain RD11_RS18885 IPR029055 Nucleophile aminohydrolases, N-terminal RD11_RS18890 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 RD11_RS18890 IPR009051 Alpha-helical ferredoxin RD11_RS18890 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain RD11_RS18890 IPR028261 Dihydroprymidine dehydrogenase domain II RD11_RS18895 IPR005618 Outer membrane protein, OmpW RD11_RS18895 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel RD11_RS18900 IPR005064 Bordetella uptake gene RD11_RS18905 IPR003439 ABC transporter-like RD11_RS18905 IPR003593 AAA+ ATPase domain RD11_RS18905 IPR017871 ABC transporter, conserved site RD11_RS18905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18910 IPR003453 Permease domain RD11_RS18910 IPR030802 RD11_RS18910 RD11_RS18915 IPR003399 Mammalian cell entry-related RD11_RS18915 IPR030970 RD11_RS18915 RD11_RS18920 IPR007428 VacJ-like lipoprotein RD11_RS18925 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RD11_RS18925 IPR023094 Toluene tolerance protein, alpha-helical RD11_RS18925 IPR032710 RD11_RS18925 RD11_RS18930 IPR003439 ABC transporter-like RD11_RS18930 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS18935 IPR000412 ABC-2 transporter RD11_RS18935 IPR013525 ABC-2 type transporter RD11_RS18940 IPR002634 BolA protein RD11_RS18945 IPR001986 Enolpyruvate transferase domain RD11_RS18945 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RD11_RS18945 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RD11_RS18950 IPR001348 ATP phosphoribosyltransferase HisG RD11_RS18950 IPR013820 ATP phosphoribosyltransferase, catalytic domain RD11_RS18950 IPR018198 ATP phosphoribosyltransferase, conserved site RD11_RS18950 IPR024893 ATP phosphoribosyltransferase HisG, short form RD11_RS18955 IPR001692 Histidinol dehydrogenase, conserved site RD11_RS18955 IPR012131 Histidinol dehydrogenase RD11_RS18955 IPR016161 Aldehyde/histidinol dehydrogenase RD11_RS18955 IPR022695 Histidinol dehydrogenase, monofunctional RD11_RS18960 IPR004839 Aminotransferase, class I/classII RD11_RS18960 IPR005861 Histidinol-phosphate aminotransferase family RD11_RS18960 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS18960 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS18960 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS18965 IPR000807 Imidazoleglycerol-phosphate dehydratase RD11_RS18965 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RD11_RS18965 IPR020568 Ribosomal protein S5 domain 2-type fold RD11_RS18970 IPR010139 Imidazole glycerol phosphate synthase, subunit H RD11_RS18970 IPR017926 Glutamine amidotransferase RD11_RS18970 IPR029062 Class I glutamine amidotransferase-like RD11_RS18975 IPR006062 Histidine biosynthesis RD11_RS18975 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA RD11_RS18975 IPR011060 Ribulose-phosphate binding barrel RD11_RS18975 IPR013785 Aldolase-type TIM barrel RD11_RS18975 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RD11_RS18980 IPR004651 Histidine biosynthesis, HisF RD11_RS18980 IPR006062 Histidine biosynthesis RD11_RS18980 IPR011060 Ribulose-phosphate binding barrel RD11_RS18980 IPR013785 Aldolase-type TIM barrel RD11_RS18985 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RD11_RS18985 IPR026660 Phosphoribosyl-AMP cyclohydrolase RD11_RS18990 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase RD11_RS18990 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like RD11_RS18995 IPR001310 Histidine triad (HIT) protein RD11_RS18995 IPR011146 HIT-like domain RD11_RS18995 IPR019808 Histidine triad, conserved site RD11_RS19000 IPR003369 Sec-independent protein translocase protein TatA/B/E RD11_RS19000 IPR006312 Sec-independent protein translocase protein TatA/E RD11_RS19005 IPR003369 Sec-independent protein translocase protein TatA/B/E RD11_RS19005 IPR003998 Twin-arginine translocation protein TatB-like RD11_RS19005 IPR018448 Twin-arginine translocation protein TatB RD11_RS19010 IPR002033 Sec-independent periplasmic protein translocase TatC RD11_RS19015 IPR001387 Cro/C1-type helix-turn-helix domain RD11_RS19015 IPR001584 Integrase, catalytic core RD11_RS19015 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS19015 IPR012337 Ribonuclease H-like domain RD11_RS19020 IPR005064 Bordetella uptake gene RD11_RS19025 IPR003898 Bordetella pertussis toxin A RD11_RS19030 IPR003899 Bordetella pertussis toxin B RD11_RS19030 IPR005138 Aerolysin/Pertussis toxin APT RD11_RS19030 IPR008992 Enterotoxin RD11_RS19030 IPR016187 C-type lectin fold RD11_RS19030 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD11_RS19035 IPR008992 Enterotoxin RD11_RS19035 IPR015355 Pertussis toxin, subunit S4 RD11_RS19040 IPR008992 Enterotoxin RD11_RS19040 IPR015356 Pertussis toxin, subunit S5 RD11_RS19045 IPR003899 Bordetella pertussis toxin B RD11_RS19045 IPR005138 Aerolysin/Pertussis toxin APT RD11_RS19045 IPR008992 Enterotoxin RD11_RS19045 IPR016187 C-type lectin fold RD11_RS19045 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal RD11_RS19050 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RD11_RS19055 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RD11_RS19060 IPR004346 CagE, TrbE, VirB component of type IV transporter system RD11_RS19060 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain RD11_RS19060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19065 IPR007688 Conjugal transfer, TrbL/VirB6 RD11_RS19075 IPR007430 Bacterial virulence protein VirB8 RD11_RS19075 IPR026264 Type IV secretion system protein VirB8/PtlE RD11_RS19075 IPR032710 RD11_RS19075 RD11_RS19080 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RD11_RS19080 IPR014148 P-type conjugative transfer protein VirB9 RD11_RS19085 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RD11_RS19090 IPR001482 Type II secretion system protein E RD11_RS19090 IPR014155 Type IV secretion system protein VirB11 RD11_RS19090 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RD11_RS19090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19100 IPR000620 Drug/metabolite transporter RD11_RS19105 IPR009057 Homeodomain-like RD11_RS19105 IPR018060 DNA binding HTH domain, AraC-type RD11_RS19105 IPR018062 HTH domain AraC-type, conserved site RD11_RS19110 IPR010652 Protein of unknown function DUF1232 RD11_RS19110 IPR016983 Uncharacterised conserved protein UCP031804 RD11_RS19115 IPR021296 Protein of unknown function DUF2868 RD11_RS19120 IPR006073 GTP binding domain RD11_RS19120 IPR021871 Protein of unknown function DUF3482 RD11_RS19120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19125 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS19125 IPR030678 RD11_RS19125 RD11_RS19130 IPR000515 MetI-like domain RD11_RS19135 IPR000515 MetI-like domain RD11_RS19135 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD11_RS19140 IPR003439 ABC transporter-like RD11_RS19140 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19145 IPR001584 Integrase, catalytic core RD11_RS19145 IPR009057 Homeodomain-like RD11_RS19145 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS19145 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS19145 IPR012337 Ribonuclease H-like domain RD11_RS19145 IPR024967 DNA-binding domain, IS481-type RD11_RS19150 IPR002813 Arginine biosynthesis protein ArgJ RD11_RS19150 IPR016117 ArgJ-like domain RD11_RS19155 IPR008533 Domain of unknown function DUF815 RD11_RS19155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19160 IPR000086 NUDIX hydrolase domain RD11_RS19160 IPR003733 Thiamine phosphate synthase RD11_RS19160 IPR013785 Aldolase-type TIM barrel RD11_RS19160 IPR015797 NUDIX hydrolase domain-like RD11_RS19160 IPR020084 NUDIX hydrolase, conserved site RD11_RS19160 IPR020476 NUDIX hydrolase RD11_RS19160 IPR022998 Thiamin phosphate synthase superfamily RD11_RS19165 IPR001584 Integrase, catalytic core RD11_RS19165 IPR009057 Homeodomain-like RD11_RS19165 IPR012337 Ribonuclease H-like domain RD11_RS19165 IPR024967 DNA-binding domain, IS481-type RD11_RS19170 IPR001584 Integrase, catalytic core RD11_RS19170 IPR009057 Homeodomain-like RD11_RS19170 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS19170 IPR012337 Ribonuclease H-like domain RD11_RS19170 IPR024967 DNA-binding domain, IS481-type RD11_RS19175 IPR001584 Integrase, catalytic core RD11_RS19175 IPR009057 Homeodomain-like RD11_RS19175 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS19175 IPR012337 Ribonuclease H-like domain RD11_RS19175 IPR024967 DNA-binding domain, IS481-type RD11_RS19180 IPR003423 Outer membrane efflux protein RD11_RS19180 IPR010131 RND efflux system, outer membrane lipoprotein, NodT RD11_RS19185 IPR001036 Acriflavin resistance protein RD11_RS19185 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RD11_RS19195 IPR006143 RND efflux pump, membrane fusion protein RD11_RS19195 IPR022824 Multidrug resistance protein MdtA RD11_RS19200 IPR009777 Cell division protein ZapD RD11_RS19200 IPR027462 Z ring-associated protein D, C-terminal domain RD11_RS19205 IPR001977 Dephospho-CoA kinase RD11_RS19205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19210 IPR000045 Prepilin type IV endopeptidase, peptidase domain RD11_RS19210 IPR010627 Peptidase A24A, N-terminal RD11_RS19210 IPR014032 Peptidase A24A, prepilin type IV, bacterial RD11_RS19215 IPR007298 Copper resistance lipoprotein NlpE RD11_RS19220 IPR000792 Transcription regulator LuxR, C-terminal RD11_RS19220 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS19220 IPR016032 Signal transduction response regulator, C-terminal effector RD11_RS19225 IPR003721 Pantoate-beta-alanine ligase RD11_RS19225 IPR004821 Cytidyltransferase-like domain RD11_RS19225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RD11_RS19230 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA RD11_RS19235 IPR021853 Protein of unknown function DUF3460 RD11_RS19240 IPR004638 Drug resistance transporter EmrB/QacA subfamily RD11_RS19240 IPR011701 Major facilitator superfamily RD11_RS19240 IPR020846 Major facilitator superfamily domain RD11_RS19245 IPR000577 RD11_RS19245 RD11_RS19245 IPR005999 Glycerol kinase RD11_RS19245 IPR018483 Carbohydrate kinase, FGGY, conserved site RD11_RS19245 IPR018484 Carbohydrate kinase, FGGY, N-terminal RD11_RS19245 IPR018485 Carbohydrate kinase, FGGY, C-terminal RD11_RS19250 IPR005265 Uncharacterised protein family UPF0093 RD11_RS19255 IPR005064 Bordetella uptake gene RD11_RS19260 IPR003439 ABC transporter-like RD11_RS19260 IPR003593 AAA+ ATPase domain RD11_RS19260 IPR017871 ABC transporter, conserved site RD11_RS19260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19260 IPR030679 RD11_RS19260 RD11_RS19265 IPR000515 MetI-like domain RD11_RS19265 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS19270 IPR000515 MetI-like domain RD11_RS19270 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family RD11_RS19275 IPR001638 Extracellular solute-binding protein, family 3 RD11_RS19275 IPR018313 Extracellular solute-binding protein, family 3, conserved site RD11_RS19280 IPR003439 ABC transporter-like RD11_RS19280 IPR003593 AAA+ ATPase domain RD11_RS19280 IPR017871 ABC transporter, conserved site RD11_RS19280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19285 IPR003838 Permease FtsX-like RD11_RS19285 IPR004513 ABC transporter, cell division protein FtsX RD11_RS19290 IPR005659 Chemoreceptor glutamine deamidase CheD RD11_RS19290 IPR011324 Cytotoxic necrotizing factor-like, catalytic RD11_RS19295 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RD11_RS19295 IPR029061 Thiamin diphosphate-binding fold RD11_RS19300 IPR000445 Helix-hairpin-helix motif RD11_RS19300 IPR003265 HhH-GPD domain RD11_RS19300 IPR004035 Endonuclease III, iron-sulphur binding site RD11_RS19300 IPR004036 Endonuclease III-like, conserved site-2 RD11_RS19300 IPR005760 A/G-specific adenine glycosylase MutY RD11_RS19300 IPR011257 DNA glycosylase RD11_RS19300 IPR015797 NUDIX hydrolase domain-like RD11_RS19300 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RD11_RS19300 IPR029119 MutY, C-terminal RD11_RS19305 IPR001387 Cro/C1-type helix-turn-helix domain RD11_RS19305 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS19310 IPR013216 Methyltransferase type 11 RD11_RS19310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like RD11_RS19315 IPR001584 Integrase, catalytic core RD11_RS19315 IPR009057 Homeodomain-like RD11_RS19315 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS19315 IPR012337 Ribonuclease H-like domain RD11_RS19315 IPR024967 DNA-binding domain, IS481-type RD11_RS19320 IPR003673 CoA-transferase family III RD11_RS19320 IPR023606 CoA-transferase family III domain RD11_RS19325 IPR003673 CoA-transferase family III RD11_RS19325 IPR023606 CoA-transferase family III domain RD11_RS19330 IPR005656 MmgE/PrpD RD11_RS19335 IPR005064 Bordetella uptake gene RD11_RS19340 IPR001753 Crotonase superfamily RD11_RS19340 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS19340 IPR029045 ClpP/crotonase-like domain RD11_RS19345 IPR000415 Nitroreductase-like RD11_RS19345 IPR029479 Nitroreductase RD11_RS19350 IPR001647 DNA-binding HTH domain, TetR-type RD11_RS19350 IPR009057 Homeodomain-like RD11_RS19350 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RD11_RS19350 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal RD11_RS19355 IPR000891 Pyruvate carboxyltransferase RD11_RS19355 IPR013785 Aldolase-type TIM barrel RD11_RS19360 IPR001753 Crotonase superfamily RD11_RS19360 IPR014748 Crontonase, C-terminal RD11_RS19360 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RD11_RS19360 IPR029045 ClpP/crotonase-like domain RD11_RS19365 IPR003673 CoA-transferase family III RD11_RS19365 IPR023606 CoA-transferase family III domain RD11_RS19370 IPR005064 Bordetella uptake gene RD11_RS19375 IPR001584 Integrase, catalytic core RD11_RS19375 IPR009057 Homeodomain-like RD11_RS19375 IPR010982 Lambda repressor-like, DNA-binding domain RD11_RS19375 IPR012337 Ribonuclease H-like domain RD11_RS19375 IPR024967 DNA-binding domain, IS481-type RD11_RS19380 IPR002226 Catalase haem-binding site RD11_RS19380 IPR010582 Catalase immune-responsive domain RD11_RS19380 IPR011614 Catalase core domain RD11_RS19380 IPR018028 Catalase, mono-functional, haem-containing RD11_RS19380 IPR020835 Catalase-like domain RD11_RS19380 IPR024708 Catalase active site RD11_RS19380 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 RD11_RS19385 IPR000515 MetI-like domain RD11_RS19390 IPR003439 ABC transporter-like RD11_RS19390 IPR003593 AAA+ ATPase domain RD11_RS19390 IPR017871 ABC transporter, conserved site RD11_RS19390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19400 IPR003819 Taurine catabolism dioxygenase TauD/TfdA RD11_RS19405 IPR002933 Peptidase M20 RD11_RS19405 IPR011650 Peptidase M20, dimerisation domain RD11_RS19405 IPR017439 Amidohydrolase RD11_RS19410 IPR003439 ABC transporter-like RD11_RS19410 IPR003593 AAA+ ATPase domain RD11_RS19410 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS19410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19415 IPR003439 ABC transporter-like RD11_RS19415 IPR003593 AAA+ ATPase domain RD11_RS19415 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RD11_RS19415 IPR017871 ABC transporter, conserved site RD11_RS19415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19420 IPR000515 MetI-like domain RD11_RS19420 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RD11_RS19425 IPR000515 MetI-like domain RD11_RS19430 IPR000914 Bacterial extracellular solute-binding protein, family 5 RD11_RS19430 IPR030678 RD11_RS19430 RD11_RS19435 IPR004520 tRNA modification GTPase MnmE RD11_RS19435 IPR005225 Small GTP-binding protein domain RD11_RS19435 IPR006073 GTP binding domain RD11_RS19435 IPR018948 GTP-binding protein TrmE, N-terminal RD11_RS19435 IPR025867 tRNA modification GTPase MnmE C-terminal domain RD11_RS19435 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RD11_RS19435 IPR027368 tRNA modification GTPase MnmE domain 2 RD11_RS19435 IPR027417 P-loop containing nucleoside triphosphate hydrolase RD11_RS19440 IPR011701 Major facilitator superfamily RD11_RS19440 IPR020846 Major facilitator superfamily domain RD11_RS19445 IPR001789 Signal transduction response regulator, receiver domain RD11_RS19445 IPR001867 Signal transduction response regulator, C-terminal RD11_RS19445 IPR011006 CheY-like superfamily RD11_RS19445 IPR011991 Winged helix-turn-helix DNA-binding domain RD11_RS19450 IPR003594 Histidine kinase-like ATPase, C-terminal domain RD11_RS19450 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain RD11_RS19450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RD11_RS19450 IPR013727 Two-component sensor kinase N-terminal RD11_RS19455 IPR005064 Bordetella uptake gene RD11_RS19460 IPR009936 Protein of unknown function DUF1468 RD11_RS19465 IPR002823 Protein of unknown function DUF112, transmembrane RD11_RS19470 IPR004839 Aminotransferase, class I/classII RD11_RS19470 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 RD11_RS19470 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 RD11_RS19470 IPR015424 Pyridoxal phosphate-dependent transferase RD11_RS19475 IPR002059 Cold-shock protein, DNA-binding RD11_RS19475 IPR011129 Cold shock protein RD11_RS19475 IPR012156 Cold shock, CspA RD11_RS19475 IPR012340 Nucleic acid-binding, OB-fold RD11_RS19475 IPR019844 Cold-shock conserved site