RD11_RS00005 SM01228 RD11_RS00005 RD11_RS00025 SM00470 ParB-like nuclease domain RD11_RS00030 SM00870 RD11_RS00030 RD11_RS00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RD11_RS00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RD11_RS00075 SM00649 Ribosomal protein L11/L12 RD11_RS00100 SM00663 RNA polymerase I subunit A N-terminus RD11_RS00130 SM00448 cheY-homologous receiver domain RD11_RS00130 SM00862 Transcriptional regulatory protein, C terminal RD11_RS00200 SM00563 Phosphate acyltransferases RD11_RS00240 SM00421 helix_turn_helix, Lux Regulon RD11_RS00285 SM00382 ATPases associated with a variety of cellular activities RD11_RS00300 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS00390 SM00387 Histidine kinase-like ATPases RD11_RS00400 SM00644 RD11_RS00400 RD11_RS00415 SM00382 ATPases associated with a variety of cellular activities RD11_RS00415 SM00962 SRP54-type protein, GTPase domain RD11_RS00415 SM00963 SRP54-type protein, helical bundle domain RD11_RS00515 SM00382 ATPases associated with a variety of cellular activities RD11_RS00540 SM00936 Penicillin-binding protein 5, C-terminal domain RD11_RS00560 SM00729 Elongator protein 3, MiaB family, Radical SAM RD11_RS00605 SM00836 DALR anticodon binding domain RD11_RS00605 SM01016 Arginyl tRNA synthetase N terminal dom RD11_RS00640 SM00382 ATPases associated with a variety of cellular activities RD11_RS00655 SM00382 ATPases associated with a variety of cellular activities RD11_RS00690 SM00917 LeuA allosteric (dimerisation) domain RD11_RS00745 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS00745 SM00895 RD11_RS00745 RD11_RS00780 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS00790 SM00797 Allophanate hydrolase subunit 2 RD11_RS00795 SM00796 Allophanate hydrolase subunit 1 RD11_RS00820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS00820 SM00387 Histidine kinase-like ATPases RD11_RS00820 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS00825 SM00448 cheY-homologous receiver domain RD11_RS00825 SM00862 Transcriptional regulatory protein, C terminal RD11_RS00830 SM00091 PAS domain RD11_RS00830 SM00387 Histidine kinase-like ATPases RD11_RS00830 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS00835 SM00448 cheY-homologous receiver domain RD11_RS00835 SM00862 Transcriptional regulatory protein, C terminal RD11_RS00845 SM00978 RD11_RS00845 RD11_RS00870 SM00382 ATPases associated with a variety of cellular activities RD11_RS00885 SM00487 DEAD-like helicases superfamily RD11_RS00885 SM00490 helicase superfamily c-terminal domain RD11_RS00930 SM00450 Rhodanese Homology Domain RD11_RS01025 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS01025 SM00895 RD11_RS01025 RD11_RS01075 SM00882 Coenzyme A transferase RD11_RS01080 SM00882 Coenzyme A transferase RD11_RS01085 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS01105 SM00869 Autotransporter beta-domain RD11_RS01135 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS01135 SM00895 RD11_RS01135 RD11_RS01200 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS01200 SM00895 RD11_RS01200 RD11_RS01240 SM00382 ATPases associated with a variety of cellular activities RD11_RS01255 SM00853 MutL C terminal dimerisation domain RD11_RS01255 SM01340 RD11_RS01255 RD11_RS01265 SM00646 RD11_RS01265 RD11_RS01345 SM00382 ATPases associated with a variety of cellular activities RD11_RS01350 SM00382 ATPases associated with a variety of cellular activities RD11_RS01390 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain RD11_RS01400 SM00344 helix_turn_helix ASNC type RD11_RS01430 SM00382 ATPases associated with a variety of cellular activities RD11_RS01440 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RD11_RS01440 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RD11_RS01440 SM00493 RD11_RS01440 RD11_RS01475 SM01119 RD11_RS01475 RD11_RS01495 SM00878 Biotin carboxylase C-terminal domain RD11_RS01495 SM01209 RD11_RS01495 RD11_RS01525 SM00849 Metallo-beta-lactamase superfamily RD11_RS01530 SM00422 helix_turn_helix, mercury resistance RD11_RS01550 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS01550 SM00871 Bacterial transcription activator, effector binding domain RD11_RS01575 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS01580 SM00387 Histidine kinase-like ATPases RD11_RS01580 SM00433 TopoisomeraseII RD11_RS01585 SM00480 DNA polymerase III beta subunit RD11_RS01590 SM00382 ATPases associated with a variety of cellular activities RD11_RS01590 SM00760 Bacterial dnaA protein helix-turn-helix domain RD11_RS01605 SM01234 RD11_RS01605 RD11_RS01640 SM00387 Histidine kinase-like ATPases RD11_RS01640 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS01735 SM00244 prohibitin homologues RD11_RS01745 SM01119 RD11_RS01745 RD11_RS01775 SM00869 Autotransporter beta-domain RD11_RS01795 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS01835 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS01835 SM00895 RD11_RS01835 RD11_RS01855 SM00729 Elongator protein 3, MiaB family, Radical SAM RD11_RS01905 SM00344 helix_turn_helix ASNC type RD11_RS01925 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS01990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS01990 SM00387 Histidine kinase-like ATPases RD11_RS01990 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS01995 SM00448 cheY-homologous receiver domain RD11_RS02010 SM00347 helix_turn_helix multiple antibiotic resistance protein RD11_RS02075 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD11_RS02095 SM00382 ATPases associated with a variety of cellular activities RD11_RS02155 SM00450 Rhodanese Homology Domain RD11_RS02160 SM00855 Phosphoglycerate mutase family RD11_RS02170 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD11_RS02170 SM00245 tail specific protease RD11_RS02190 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS02220 SM00382 ATPases associated with a variety of cellular activities RD11_RS02225 SM00382 ATPases associated with a variety of cellular activities RD11_RS02265 SM00861 Transketolase, pyrimidine binding domain RD11_RS02275 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS02280 SM00881 CoA binding domain RD11_RS02340 SM01130 RD11_RS02340 RD11_RS02365 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS02370 SM00838 Elongation factor G C-terminus RD11_RS02370 SM00889 Elongation factor G, domain IV RD11_RS02440 SM00357 Cold shock protein domain RD11_RS02450 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS02450 SM00895 RD11_RS02450 RD11_RS02465 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD11_RS02535 SM00363 S4 RNA-binding domain RD11_RS02540 SM00316 Ribosomal protein S1-like RNA-binding domain RD11_RS02580 SM00954 Region found in RelA / SpoT proteins RD11_RS02625 SM00478 endonuclease III RD11_RS02625 SM00525 RD11_RS02625 RD11_RS02630 SM00382 ATPases associated with a variety of cellular activities RD11_RS02635 SM00382 ATPases associated with a variety of cellular activities RD11_RS02665 SM00382 ATPases associated with a variety of cellular activities RD11_RS02690 SM00382 ATPases associated with a variety of cellular activities RD11_RS02715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD11_RS02715 SM00292 breast cancer carboxy-terminal domain RD11_RS02715 SM00532 Ligase N family RD11_RS02720 SM00771 ZipA, C-terminal domain (FtsZ-binding) RD11_RS02725 SM00968 SMC proteins Flexible Hinge Domain RD11_RS02735 SM00986 Uracil DNA glycosylase superfamily RD11_RS02735 SM00987 UreE urease accessory protein, C-terminal domain RD11_RS02745 SM00448 cheY-homologous receiver domain RD11_RS02745 SM00862 Transcriptional regulatory protein, C terminal RD11_RS02755 SM00387 Histidine kinase-like ATPases RD11_RS02755 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS02770 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS02785 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS02785 SM00895 RD11_RS02785 RD11_RS02790 SM01130 RD11_RS02790 RD11_RS02845 SM00387 Histidine kinase-like ATPases RD11_RS02845 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS02850 SM00448 cheY-homologous receiver domain RD11_RS02850 SM00862 Transcriptional regulatory protein, C terminal RD11_RS02875 SM00411 bacterial (prokaryotic) histone like domain RD11_RS02880 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RD11_RS02890 SM00967 RNA 2'-O ribose methyltransferase substrate binding RD11_RS02895 SM00316 Ribosomal protein S1-like RNA-binding domain RD11_RS02895 SM00357 Cold shock protein domain RD11_RS02895 SM00955 RD11_RS02895 RD11_RS02905 SM01144 RD11_RS02905 RD11_RS02940 SM00155 Phospholipase D. Active site motifs. RD11_RS02985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD11_RS02990 SM00267 diguanylate cyclase RD11_RS03045 SM00883 Chaperonin 10 Kd subunit RD11_RS03055 SM00869 Autotransporter beta-domain RD11_RS03075 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RD11_RS03115 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS03155 SM00880 RD11_RS03155 RD11_RS03160 SM00382 ATPases associated with a variety of cellular activities RD11_RS03160 SM00962 SRP54-type protein, GTPase domain RD11_RS03160 SM00963 SRP54-type protein, helical bundle domain RD11_RS03195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD11_RS03225 SM00382 ATPases associated with a variety of cellular activities RD11_RS03245 SM00919 Malic enzyme, NAD binding domain RD11_RS03245 SM01274 RD11_RS03245 RD11_RS03265 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS03265 SM00895 RD11_RS03265 RD11_RS03340 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS03345 SM00852 Probable molybdopterin binding domain RD11_RS03365 SM00487 DEAD-like helicases superfamily RD11_RS03365 SM00490 helicase superfamily c-terminal domain RD11_RS03440 SM01011 Aminopeptidase P, N-terminal domain RD11_RS03465 SM00798 AICARFT/IMPCHase bienzyme RD11_RS03465 SM00851 MGS-like domain RD11_RS03475 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD11_RS03490 SM00382 ATPases associated with a variety of cellular activities RD11_RS03495 SM00341 Helicase and RNase D C-terminal RD11_RS03495 SM00487 DEAD-like helicases superfamily RD11_RS03495 SM00490 helicase superfamily c-terminal domain RD11_RS03495 SM00956 RD11_RS03495 RD11_RS03510 SM00947 Carbonic anhydrase RD11_RS03535 SM00382 ATPases associated with a variety of cellular activities RD11_RS03540 SM00382 ATPases associated with a variety of cellular activities RD11_RS03770 SM00448 cheY-homologous receiver domain RD11_RS03770 SM00862 Transcriptional regulatory protein, C terminal RD11_RS03825 SM00382 ATPases associated with a variety of cellular activities RD11_RS03870 SM00650 Ribosomal RNA adenine dimethylases RD11_RS03935 SM00382 ATPases associated with a variety of cellular activities RD11_RS03955 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS03990 SM00867 YceI-like domain RD11_RS03995 SM00965 Secretin and TonB N terminus short domain RD11_RS04030 SM00530 Helix-turn-helix XRE-family like proteins RD11_RS04035 SM00862 Transcriptional regulatory protein, C terminal RD11_RS04040 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RD11_RS04120 SM00382 ATPases associated with a variety of cellular activities RD11_RS04140 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS04155 SM00382 ATPases associated with a variety of cellular activities RD11_RS04185 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS04185 SM00895 RD11_RS04185 RD11_RS04190 SM00869 Autotransporter beta-domain RD11_RS04195 SM00895 RD11_RS04195 RD11_RS04200 SM00829 Enoylreductase RD11_RS04220 SM00382 ATPases associated with a variety of cellular activities RD11_RS04280 SM00487 DEAD-like helicases superfamily RD11_RS04280 SM00490 helicase superfamily c-terminal domain RD11_RS04280 SM00982 RD11_RS04280 RD11_RS04280 SM01058 CarD-like/TRCF domain RD11_RS04365 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD11_RS04370 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD11_RS04425 SM00014 Acid phosphatase homologues RD11_RS04485 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS04510 SM00450 Rhodanese Homology Domain RD11_RS04575 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS04600 SM00829 Enoylreductase RD11_RS04630 SM00316 Ribosomal protein S1-like RNA-binding domain RD11_RS04630 SM00322 K homology RNA-binding domain RD11_RS04635 SM01387 RD11_RS04635 RD11_RS04675 SM00382 ATPases associated with a variety of cellular activities RD11_RS04750 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS04750 SM00866 RD11_RS04750 RD11_RS04755 SM00878 Biotin carboxylase C-terminal domain RD11_RS04805 SM00382 ATPases associated with a variety of cellular activities RD11_RS04910 SM00434 DNA Topoisomerase IV RD11_RS04920 SM00830 Chorismate mutase type II RD11_RS04940 SM00316 Ribosomal protein S1-like RNA-binding domain RD11_RS04945 SM00411 bacterial (prokaryotic) histone like domain RD11_RS04995 SM00893 Electron transfer flavoprotein domain RD11_RS05000 SM00893 Electron transfer flavoprotein domain RD11_RS05035 SM00382 ATPases associated with a variety of cellular activities RD11_RS05055 SM00729 Elongator protein 3, MiaB family, Radical SAM RD11_RS05105 SM00363 S4 RNA-binding domain RD11_RS05150 SM00421 helix_turn_helix, Lux Regulon RD11_RS05150 SM00448 cheY-homologous receiver domain RD11_RS05155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD11_RS05155 SM00091 PAS domain RD11_RS05155 SM00387 Histidine kinase-like ATPases RD11_RS05155 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS05190 SM00861 Transketolase, pyrimidine binding domain RD11_RS05195 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD11_RS05245 SM00271 DnaJ molecular chaperone homology domain RD11_RS05265 SM00852 Probable molybdopterin binding domain RD11_RS05285 SM00316 Ribosomal protein S1-like RNA-binding domain RD11_RS05320 SM00448 cheY-homologous receiver domain RD11_RS05325 SM00073 Histidine Phosphotransfer domain RD11_RS05325 SM00260 Two component signalling adaptor domain RD11_RS05325 SM00387 Histidine kinase-like ATPases RD11_RS05325 SM01231 RD11_RS05325 RD11_RS05330 SM00260 Two component signalling adaptor domain RD11_RS05335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD11_RS05335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS05345 SM00448 cheY-homologous receiver domain RD11_RS05350 SM00448 cheY-homologous receiver domain RD11_RS05390 SM01091 Transporter associated domain RD11_RS05405 SM00729 Elongator protein 3, MiaB family, Radical SAM RD11_RS05430 SM01323 RD11_RS05430 RD11_RS05460 SM00869 Autotransporter beta-domain RD11_RS05510 SM00919 Malic enzyme, NAD binding domain RD11_RS05510 SM01274 RD11_RS05510 RD11_RS05535 SM00382 ATPases associated with a variety of cellular activities RD11_RS05580 SM00382 ATPases associated with a variety of cellular activities RD11_RS05590 SM01103 RD11_RS05590 RD11_RS05625 SM00116 Domain in cystathionine beta-synthase and other proteins. RD11_RS05645 SM00448 cheY-homologous receiver domain RD11_RS05645 SM00862 Transcriptional regulatory protein, C terminal RD11_RS05650 SM00052 Putative diguanylate phosphodiesterase RD11_RS05650 SM00267 diguanylate cyclase RD11_RS05650 SM00387 Histidine kinase-like ATPases RD11_RS05650 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS05660 SM00382 ATPases associated with a variety of cellular activities RD11_RS05680 SM00382 ATPases associated with a variety of cellular activities RD11_RS05705 SM00822 RD11_RS05705 RD11_RS05710 SM00937 RD11_RS05710 RD11_RS05730 SM00382 ATPases associated with a variety of cellular activities RD11_RS05740 SM00869 Autotransporter beta-domain RD11_RS05770 SM00481 DNA polymerase alpha chain like domain RD11_RS05790 SM00919 Malic enzyme, NAD binding domain RD11_RS05790 SM01274 RD11_RS05790 RD11_RS05800 SM00344 helix_turn_helix ASNC type RD11_RS05815 SM00861 Transketolase, pyrimidine binding domain RD11_RS05875 SM00316 Ribosomal protein S1-like RNA-binding domain RD11_RS05875 SM00732 Likely ribonuclease with RNase H fold. RD11_RS05880 SM00491 RD11_RS05880 RD11_RS05890 SM00363 S4 RNA-binding domain RD11_RS05905 SM00822 RD11_RS05905 RD11_RS05960 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD11_RS05970 SM00822 RD11_RS05970 RD11_RS05995 SM01007 Class II Aldolase and Adducin N-terminal domain RD11_RS06060 SM00382 ATPases associated with a variety of cellular activities RD11_RS06075 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS06145 SM00100 Cyclic nucleotide-monophosphate binding domain RD11_RS06145 SM00419 helix_turn_helix, cAMP Regulatory protein RD11_RS06150 SM00382 ATPases associated with a variety of cellular activities RD11_RS06150 SM01086 C-terminal, D2-small domain, of ClpB protein RD11_RS06160 SM00869 Autotransporter beta-domain RD11_RS06165 SM00869 Autotransporter beta-domain RD11_RS06230 SM00382 ATPases associated with a variety of cellular activities RD11_RS06265 SM01005 Alanine racemase, C-terminal domain RD11_RS06290 SM00327 von Willebrand factor (vWF) type A domain RD11_RS06295 SM00382 ATPases associated with a variety of cellular activities RD11_RS06370 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD11_RS06395 SM00363 S4 RNA-binding domain RD11_RS06405 SM00316 Ribosomal protein S1-like RNA-binding domain RD11_RS06445 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RD11_RS06445 SM00474 3'-5' exonuclease RD11_RS06445 SM00475 5'-3' exonuclease RD11_RS06445 SM00482 DNA polymerase A domain RD11_RS06485 SM00357 Cold shock protein domain RD11_RS06485 SM00382 ATPases associated with a variety of cellular activities RD11_RS06485 SM00959 Rho termination factor, N-terminal domain RD11_RS06495 SM00387 Histidine kinase-like ATPases RD11_RS06495 SM00433 TopoisomeraseII RD11_RS06505 SM00434 DNA Topoisomerase IV RD11_RS06540 SM00382 ATPases associated with a variety of cellular activities RD11_RS06545 SM00382 ATPases associated with a variety of cellular activities RD11_RS06595 SM00382 ATPases associated with a variety of cellular activities RD11_RS06630 SM00953 RD11_RS06630 RD11_RS06765 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS06785 SM00642 Alpha-amylase domain RD11_RS06800 SM00642 Alpha-amylase domain RD11_RS06805 SM00642 Alpha-amylase domain RD11_RS06810 SM00642 Alpha-amylase domain RD11_RS06815 SM00642 Alpha-amylase domain RD11_RS06820 SM00642 Alpha-amylase domain RD11_RS06865 SM00155 Phospholipase D. Active site motifs. RD11_RS06885 SM00869 Autotransporter beta-domain RD11_RS06910 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS06910 SM00895 RD11_RS06910 RD11_RS06915 SM00881 CoA binding domain RD11_RS06940 SM00354 helix_turn _helix lactose operon repressor RD11_RS06960 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD11_RS06975 SM00382 ATPases associated with a variety of cellular activities RD11_RS06985 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS07005 SM00382 ATPases associated with a variety of cellular activities RD11_RS07005 SM00962 SRP54-type protein, GTPase domain RD11_RS07020 SM00858 RD11_RS07020 RD11_RS07065 SM00047 Lysozyme subfamily 2 RD11_RS07080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD11_RS07080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS07085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD11_RS07085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS07090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD11_RS07090 SM00091 PAS domain RD11_RS07090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD11_RS07090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS07155 SM00382 ATPases associated with a variety of cellular activities RD11_RS07250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD11_RS07295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD11_RS07305 SM00935 Outer membrane protein (OmpH-like) RD11_RS07365 SM00244 prohibitin homologues RD11_RS07370 SM00267 diguanylate cyclase RD11_RS07435 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RD11_RS07440 SM00851 MGS-like domain RD11_RS07440 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD11_RS07450 SM00855 Phosphoglycerate mutase family RD11_RS07460 SM00382 ATPases associated with a variety of cellular activities RD11_RS07480 SM00052 Putative diguanylate phosphodiesterase RD11_RS07500 SM00852 Probable molybdopterin binding domain RD11_RS07540 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD11_RS07575 SM00382 ATPases associated with a variety of cellular activities RD11_RS07595 SM01329 RD11_RS07595 RD11_RS07600 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD11_RS07660 SM00644 RD11_RS07660 RD11_RS07695 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RD11_RS07700 SM00822 RD11_RS07700 RD11_RS07710 SM00825 Beta-ketoacyl synthase RD11_RS07735 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD11_RS07740 SM00838 Elongation factor G C-terminus RD11_RS07750 SM00358 Double-stranded RNA binding motif RD11_RS07750 SM00535 Ribonuclease III family RD11_RS07910 SM00882 Coenzyme A transferase RD11_RS07925 SM00382 ATPases associated with a variety of cellular activities RD11_RS07980 SM01192 RD11_RS07980 RD11_RS07980 SM01193 RD11_RS07980 RD11_RS07990 SM00028 Tetratricopeptide repeats RD11_RS07990 SM00862 Transcriptional regulatory protein, C terminal RD11_RS08045 SM00981 RD11_RS08045 RD11_RS08085 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS08085 SM00866 RD11_RS08085 RD11_RS08170 SM00382 ATPases associated with a variety of cellular activities RD11_RS08235 SM00382 ATPases associated with a variety of cellular activities RD11_RS08235 SM00487 DEAD-like helicases superfamily RD11_RS08235 SM00490 helicase superfamily c-terminal domain RD11_RS08235 SM00847 Helicase associated domain (HA2) Add an annotation RD11_RS08245 SM00481 DNA polymerase alpha chain like domain RD11_RS08300 SM00382 ATPases associated with a variety of cellular activities RD11_RS08320 SM00316 Ribosomal protein S1-like RNA-binding domain RD11_RS08360 SM00869 Autotransporter beta-domain RD11_RS08390 SM01209 RD11_RS08390 RD11_RS08390 SM01210 RD11_RS08390 RD11_RS08455 SM00382 ATPases associated with a variety of cellular activities RD11_RS08475 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS08480 SM01329 RD11_RS08480 RD11_RS08500 SM00347 helix_turn_helix multiple antibiotic resistance protein RD11_RS08515 SM00829 Enoylreductase RD11_RS08530 SM00450 Rhodanese Homology Domain RD11_RS08545 SM00382 ATPases associated with a variety of cellular activities RD11_RS08590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD11_RS08590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS08705 SM00382 ATPases associated with a variety of cellular activities RD11_RS08780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS08780 SM00331 Sigma factor PP2C-like phosphatases RD11_RS08780 SM01049 RD11_RS08780 RD11_RS08790 SM01005 Alanine racemase, C-terminal domain RD11_RS08805 SM00155 Phospholipase D. Active site motifs. RD11_RS08815 SM00869 Autotransporter beta-domain RD11_RS08850 SM00347 helix_turn_helix multiple antibiotic resistance protein RD11_RS08895 SM01207 RD11_RS08895 RD11_RS08910 SM00257 Lysin motif RD11_RS08935 SM00422 helix_turn_helix, mercury resistance RD11_RS08990 SM00749 bacterial OsmY and nodulation domain RD11_RS09050 SM00344 helix_turn_helix ASNC type RD11_RS09075 SM00904 Riboflavin kinase RD11_RS09105 SM00965 Secretin and TonB N terminus short domain RD11_RS09110 SM00382 ATPases associated with a variety of cellular activities RD11_RS09145 SM00869 Autotransporter beta-domain RD11_RS09160 SM00357 Cold shock protein domain RD11_RS09170 SM00357 Cold shock protein domain RD11_RS09190 SM00382 ATPases associated with a variety of cellular activities RD11_RS09190 SM00994 ClpX C4-type zinc finger RD11_RS09190 SM01086 C-terminal, D2-small domain, of ClpB protein RD11_RS09195 SM00382 ATPases associated with a variety of cellular activities RD11_RS09195 SM00464 Found in ATP-dependent protease La (LON) RD11_RS09250 SM00882 Coenzyme A transferase RD11_RS09255 SM00882 Coenzyme A transferase RD11_RS09280 SM00869 Autotransporter beta-domain RD11_RS09295 SM00487 DEAD-like helicases superfamily RD11_RS09295 SM00490 helicase superfamily c-terminal domain RD11_RS09300 SM00226 Low molecular weight phosphatase family RD11_RS09325 SM00271 DnaJ molecular chaperone homology domain RD11_RS09380 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS09380 SM00866 RD11_RS09380 RD11_RS09440 SM00382 ATPases associated with a variety of cellular activities RD11_RS09490 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD11_RS09540 SM00387 Histidine kinase-like ATPases RD11_RS09540 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS09545 SM00448 cheY-homologous receiver domain RD11_RS09560 SM00562 RD11_RS09560 RD11_RS09590 SM00564 beta-propeller repeat RD11_RS09595 SM00382 ATPases associated with a variety of cellular activities RD11_RS09615 SM00244 prohibitin homologues RD11_RS09620 SM00244 prohibitin homologues RD11_RS09630 SM00788 Adenylosuccinate synthetase RD11_RS09645 SM00400 zinc finger RD11_RS09645 SM00493 RD11_RS09645 RD11_RS09645 SM00766 DNA primase DnaG DnaB-binding RD11_RS09685 SM00382 ATPases associated with a variety of cellular activities RD11_RS09785 SM00382 ATPases associated with a variety of cellular activities RD11_RS09825 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS09845 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD11_RS09860 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS09860 SM00895 RD11_RS09860 RD11_RS09880 SM00382 ATPases associated with a variety of cellular activities RD11_RS09915 SM00464 Found in ATP-dependent protease La (LON) RD11_RS09925 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS09935 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD11_RS10025 SM00822 RD11_RS10025 RD11_RS10190 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD11_RS10190 SM00465 GIY-YIG type nucleases (URI domain) RD11_RS10225 SM00862 Transcriptional regulatory protein, C terminal RD11_RS10245 SM00382 ATPases associated with a variety of cellular activities RD11_RS10285 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS10285 SM00895 RD11_RS10285 RD11_RS10305 SM00382 ATPases associated with a variety of cellular activities RD11_RS10355 SM00411 bacterial (prokaryotic) histone like domain RD11_RS10360 SM00347 helix_turn_helix multiple antibiotic resistance protein RD11_RS10500 SM00479 RD11_RS10500 RD11_RS10560 SM00841 Elongation factor P, C-terminal RD11_RS10560 SM01185 RD11_RS10560 RD11_RS10590 SM00382 ATPases associated with a variety of cellular activities RD11_RS10605 SM00028 Tetratricopeptide repeats RD11_RS10635 SM00858 RD11_RS10635 RD11_RS10680 SM00347 helix_turn_helix multiple antibiotic resistance protein RD11_RS10685 SM00382 ATPases associated with a variety of cellular activities RD11_RS10705 SM00318 Staphylococcal nuclease homologues RD11_RS10725 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS10770 SM00421 helix_turn_helix, Lux Regulon RD11_RS10780 SM00347 helix_turn_helix multiple antibiotic resistance protein RD11_RS10795 SM00028 Tetratricopeptide repeats RD11_RS10820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD11_RS10850 SM00881 CoA binding domain RD11_RS10855 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS10870 SM00382 ATPases associated with a variety of cellular activities RD11_RS10985 SM00478 endonuclease III RD11_RS10990 SM00840 RD11_RS10990 RD11_RS10995 SM00028 Tetratricopeptide repeats RD11_RS11015 SM01091 Transporter associated domain RD11_RS11035 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS11130 SM00912 haemagglutination activity domain RD11_RS11135 SM00421 helix_turn_helix, Lux Regulon RD11_RS11135 SM00448 cheY-homologous receiver domain RD11_RS11140 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS11140 SM00073 Histidine Phosphotransfer domain RD11_RS11140 SM00091 PAS domain RD11_RS11140 SM00387 Histidine kinase-like ATPases RD11_RS11140 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS11140 SM00448 cheY-homologous receiver domain RD11_RS11145 SM00052 Putative diguanylate phosphodiesterase RD11_RS11185 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS11185 SM00895 RD11_RS11185 RD11_RS11225 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD11_RS11235 SM00382 ATPases associated with a variety of cellular activities RD11_RS11245 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS11245 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD11_RS11250 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS11255 SM00248 ankyrin repeats RD11_RS11335 SM00382 ATPases associated with a variety of cellular activities RD11_RS11340 SM00382 ATPases associated with a variety of cellular activities RD11_RS11440 SM00822 RD11_RS11440 RD11_RS11455 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD11_RS11560 SM00530 Helix-turn-helix XRE-family like proteins RD11_RS11565 SM00869 Autotransporter beta-domain RD11_RS11570 SM00421 helix_turn_helix, Lux Regulon RD11_RS11570 SM00448 cheY-homologous receiver domain RD11_RS11610 SM00028 Tetratricopeptide repeats RD11_RS11610 SM00327 von Willebrand factor (vWF) type A domain RD11_RS11615 SM00327 von Willebrand factor (vWF) type A domain RD11_RS11665 SM00382 ATPases associated with a variety of cellular activities RD11_RS11670 SM00382 ATPases associated with a variety of cellular activities RD11_RS11720 SM00984 UDP binding domain RD11_RS11745 SM00382 ATPases associated with a variety of cellular activities RD11_RS11790 SM00487 DEAD-like helicases superfamily RD11_RS11790 SM00490 helicase superfamily c-terminal domain RD11_RS11835 SM00382 ATPases associated with a variety of cellular activities RD11_RS11860 SM00382 ATPases associated with a variety of cellular activities RD11_RS11860 SM00448 cheY-homologous receiver domain RD11_RS11865 SM00091 PAS domain RD11_RS11865 SM00387 Histidine kinase-like ATPases RD11_RS11865 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS11870 SM01230 RD11_RS11870 RD11_RS11875 SM00729 Elongator protein 3, MiaB family, Radical SAM RD11_RS11890 SM00052 Putative diguanylate phosphodiesterase RD11_RS11890 SM00267 diguanylate cyclase RD11_RS11935 SM00530 Helix-turn-helix XRE-family like proteins RD11_RS11950 SM00822 RD11_RS11950 RD11_RS11965 SM00072 Guanylate kinase homologues. RD11_RS11970 SM01409 RD11_RS11970 RD11_RS11975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD11_RS11975 SM00954 Region found in RelA / SpoT proteins RD11_RS11980 SM00382 ATPases associated with a variety of cellular activities RD11_RS11990 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS11990 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD11_RS12005 SM01130 RD11_RS12005 RD11_RS12020 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RD11_RS12025 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RD11_RS12025 SM00534 ATPase domain of DNA mismatch repair MUTS family RD11_RS12095 SM00493 RD11_RS12095 RD11_RS12105 SM00382 ATPases associated with a variety of cellular activities RD11_RS12190 SM00382 ATPases associated with a variety of cellular activities RD11_RS12200 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS12200 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD11_RS12210 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS12215 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS12230 SM01001 AIR carboxylase RD11_RS12240 SM00530 Helix-turn-helix XRE-family like proteins RD11_RS12270 SM00421 helix_turn_helix, Lux Regulon RD11_RS12285 SM00834 Putative regulatory protein RD11_RS12305 SM00382 ATPases associated with a variety of cellular activities RD11_RS12320 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS12365 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD11_RS12370 SM00421 helix_turn_helix, Lux Regulon RD11_RS12370 SM00448 cheY-homologous receiver domain RD11_RS12390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RD11_RS12390 SM00267 diguanylate cyclase RD11_RS12440 SM01006 Siderophore biosynthesis protein domain RD11_RS12460 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS12485 SM00267 diguanylate cyclase RD11_RS12515 SM00382 ATPases associated with a variety of cellular activities RD11_RS12525 SM00843 RD11_RS12525 RD11_RS12535 SM00463 Small MutS-related domain RD11_RS12580 SM00448 cheY-homologous receiver domain RD11_RS12580 SM00862 Transcriptional regulatory protein, C terminal RD11_RS12600 SM01329 RD11_RS12600 RD11_RS12625 SM00382 ATPases associated with a variety of cellular activities RD11_RS12650 SM00271 DnaJ molecular chaperone homology domain RD11_RS12800 SM00240 Forkhead associated domain RD11_RS12800 SM00382 ATPases associated with a variety of cellular activities RD11_RS12810 SM00858 RD11_RS12810 RD11_RS12880 SM00881 CoA binding domain RD11_RS12910 SM00382 ATPases associated with a variety of cellular activities RD11_RS12915 SM00448 cheY-homologous receiver domain RD11_RS12915 SM00862 Transcriptional regulatory protein, C terminal RD11_RS12920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS12920 SM00387 Histidine kinase-like ATPases RD11_RS12920 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS12935 SM00382 ATPases associated with a variety of cellular activities RD11_RS12950 SM00822 RD11_RS12950 RD11_RS13055 SM00422 helix_turn_helix, mercury resistance RD11_RS13060 SM00411 bacterial (prokaryotic) histone like domain RD11_RS13065 SM00873 B3/4 domain RD11_RS13065 SM00874 tRNA synthetase B5 domain RD11_RS13065 SM00896 Ferredoxin-fold anticodon binding domain RD11_RS13100 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS13150 SM00354 helix_turn _helix lactose operon repressor RD11_RS13155 SM00382 ATPases associated with a variety of cellular activities RD11_RS13195 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS13205 SM00829 Enoylreductase RD11_RS13225 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS13245 SM00849 Metallo-beta-lactamase superfamily RD11_RS13245 SM01027 Beta-Casp domain RD11_RS13285 SM00382 ATPases associated with a variety of cellular activities RD11_RS13300 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS13325 SM00530 Helix-turn-helix XRE-family like proteins RD11_RS13335 SM00116 Domain in cystathionine beta-synthase and other proteins. RD11_RS13335 SM01240 RD11_RS13335 RD11_RS13345 SM00869 Autotransporter beta-domain RD11_RS13355 SM00421 helix_turn_helix, Lux Regulon RD11_RS13390 SM00344 helix_turn_helix ASNC type RD11_RS13425 SM00382 ATPases associated with a variety of cellular activities RD11_RS13430 SM00382 ATPases associated with a variety of cellular activities RD11_RS13435 SM00420 helix_turn_helix, Deoxyribose operon repressor RD11_RS13435 SM01134 RD11_RS13435 RD11_RS13445 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS13490 SM01130 RD11_RS13490 RD11_RS13530 SM01007 Class II Aldolase and Adducin N-terminal domain RD11_RS13535 SM00530 Helix-turn-helix XRE-family like proteins RD11_RS13540 SM00347 helix_turn_helix multiple antibiotic resistance protein RD11_RS13555 SM00912 haemagglutination activity domain RD11_RS13560 SM01211 RD11_RS13560 RD11_RS13655 SM00479 RD11_RS13655 RD11_RS13715 SM00938 Nitrogen regulatory protein P-II RD11_RS13750 SM00729 Elongator protein 3, MiaB family, Radical SAM RD11_RS13755 SM00852 Probable molybdopterin binding domain RD11_RS13760 SM00852 Probable molybdopterin binding domain RD11_RS13810 SM00729 Elongator protein 3, MiaB family, Radical SAM RD11_RS13810 SM00876 Biotin and Thiamin Synthesis associated domain RD11_RS13835 SM00422 helix_turn_helix, mercury resistance RD11_RS13905 SM00938 Nitrogen regulatory protein P-II RD11_RS13915 SM00869 Autotransporter beta-domain RD11_RS13935 SM00382 ATPases associated with a variety of cellular activities RD11_RS13940 SM00382 ATPases associated with a variety of cellular activities RD11_RS13985 SM00382 ATPases associated with a variety of cellular activities RD11_RS13985 SM01086 C-terminal, D2-small domain, of ClpB protein RD11_RS13995 SM01359 RD11_RS13995 RD11_RS13995 SM01360 RD11_RS13995 RD11_RS14005 SM00357 Cold shock protein domain RD11_RS14070 SM00822 RD11_RS14070 RD11_RS14170 SM00382 ATPases associated with a variety of cellular activities RD11_RS14205 SM00861 Transketolase, pyrimidine binding domain RD11_RS14220 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS14245 SM00116 Domain in cystathionine beta-synthase and other proteins. RD11_RS14245 SM00924 MgtE intracellular N domain RD11_RS14295 SM00382 ATPases associated with a variety of cellular activities RD11_RS14295 SM00930 RD11_RS14295 RD11_RS14345 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS14345 SM00895 RD11_RS14345 RD11_RS14385 SM00382 ATPases associated with a variety of cellular activities RD11_RS14415 SM00422 helix_turn_helix, mercury resistance RD11_RS14440 SM00822 RD11_RS14440 RD11_RS14505 SM00822 RD11_RS14505 RD11_RS14530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD11_RS14555 SM00829 Enoylreductase RD11_RS14570 SM00382 ATPases associated with a variety of cellular activities RD11_RS14595 SM00344 helix_turn_helix ASNC type RD11_RS14640 SM00248 ankyrin repeats RD11_RS14665 SM00382 ATPases associated with a variety of cellular activities RD11_RS14700 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS14715 SM00382 ATPases associated with a variety of cellular activities RD11_RS14755 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS14755 SM00895 RD11_RS14755 RD11_RS14825 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RD11_RS14825 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RD11_RS14835 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS14870 SM00912 haemagglutination activity domain RD11_RS14890 SM00528 Domain in histone-like proteins of HNS family RD11_RS14930 SM00257 Lysin motif RD11_RS14980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD11_RS15005 SM00448 cheY-homologous receiver domain RD11_RS15010 SM00387 Histidine kinase-like ATPases RD11_RS15105 SM00363 S4 RNA-binding domain RD11_RS15135 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD11_RS15175 SM00382 ATPases associated with a variety of cellular activities RD11_RS15195 SM00487 DEAD-like helicases superfamily RD11_RS15195 SM00490 helicase superfamily c-terminal domain RD11_RS15205 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS15205 SM00895 RD11_RS15205 RD11_RS15235 SM00344 helix_turn_helix ASNC type RD11_RS15315 SM00878 Biotin carboxylase C-terminal domain RD11_RS15345 SM00955 RD11_RS15345 RD11_RS15375 SM00344 helix_turn_helix ASNC type RD11_RS15405 SM00957 SecA DEAD-like domain RD11_RS15405 SM00958 SecA preprotein cross-linking domain RD11_RS15425 SM00864 Tubulin/FtsZ family, GTPase domain RD11_RS15425 SM00865 Tubulin/FtsZ family, C-terminal domain RD11_RS15430 SM00842 Cell division protein FtsA RD11_RS15500 SM00382 ATPases associated with a variety of cellular activities RD11_RS15515 SM00151 SWI complex, BAF60b domains RD11_RS15550 SM00344 helix_turn_helix ASNC type RD11_RS15655 SM00382 ATPases associated with a variety of cellular activities RD11_RS15655 SM01086 C-terminal, D2-small domain, of ClpB protein RD11_RS15670 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD11_RS15685 SM00382 ATPases associated with a variety of cellular activities RD11_RS15755 SM00996 S-adenosyl-L-homocysteine hydrolase RD11_RS15755 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD11_RS15810 SM00487 DEAD-like helicases superfamily RD11_RS15810 SM00490 helicase superfamily c-terminal domain RD11_RS15815 SM00986 Uracil DNA glycosylase superfamily RD11_RS15815 SM00987 UreE urease accessory protein, C-terminal domain RD11_RS15825 SM00155 Phospholipase D. Active site motifs. RD11_RS15830 SM00382 ATPases associated with a variety of cellular activities RD11_RS15880 SM00344 helix_turn_helix ASNC type RD11_RS15880 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS15935 SM01400 RD11_RS15935 RD11_RS15955 SM00028 Tetratricopeptide repeats RD11_RS15960 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RD11_RS15960 SM01232 RD11_RS15960 RD11_RS15965 SM00849 Metallo-beta-lactamase superfamily RD11_RS16000 SM00387 Histidine kinase-like ATPases RD11_RS16000 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS16005 SM00448 cheY-homologous receiver domain RD11_RS16005 SM00862 Transcriptional regulatory protein, C terminal RD11_RS16065 SM00984 UDP binding domain RD11_RS16095 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS16150 SM00988 UreE urease accessory protein, N-terminal domain RD11_RS16180 SM00422 helix_turn_helix, mercury resistance RD11_RS16200 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS16200 SM00866 RD11_RS16200 RD11_RS16280 SM00382 ATPases associated with a variety of cellular activities RD11_RS16285 SM00382 ATPases associated with a variety of cellular activities RD11_RS16295 SM00822 RD11_RS16295 RD11_RS16370 SM00849 Metallo-beta-lactamase superfamily RD11_RS16375 SM00257 Lysin motif RD11_RS16415 SM00448 cheY-homologous receiver domain RD11_RS16415 SM00862 Transcriptional regulatory protein, C terminal RD11_RS16420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD11_RS16420 SM00387 Histidine kinase-like ATPases RD11_RS16505 SM00382 ATPases associated with a variety of cellular activities RD11_RS16540 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS16540 SM00866 RD11_RS16540 RD11_RS16565 SM00903 Flavin reductase like domain RD11_RS16645 SM00925 MltA specific insert domain RD11_RS16675 SM00905 Dihydroneopterin aldolase RD11_RS16685 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD11_RS16745 SM00382 ATPases associated with a variety of cellular activities RD11_RS16765 SM00487 DEAD-like helicases superfamily RD11_RS16765 SM00490 helicase superfamily c-terminal domain RD11_RS16790 SM00382 ATPases associated with a variety of cellular activities RD11_RS16910 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS16950 SM00155 Phospholipase D. Active site motifs. RD11_RS16970 SM00834 Putative regulatory protein RD11_RS17000 SM00116 Domain in cystathionine beta-synthase and other proteins. RD11_RS17020 SM00382 ATPases associated with a variety of cellular activities RD11_RS17075 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD11_RS17085 SM01092 CO dehydrogenase flavoprotein C-terminal domain RD11_RS17115 SM00937 RD11_RS17115 RD11_RS17145 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS17155 SM00881 CoA binding domain RD11_RS17180 SM00344 helix_turn_helix ASNC type RD11_RS17210 SM00881 CoA binding domain RD11_RS17220 SM00829 Enoylreductase RD11_RS17295 SM00479 RD11_RS17295 RD11_RS17390 SM00450 Rhodanese Homology Domain RD11_RS17430 SM00346 helix_turn_helix isocitrate lyase regulation RD11_RS17435 SM00450 Rhodanese Homology Domain RD11_RS17500 SM00749 bacterial OsmY and nodulation domain RD11_RS17575 SM00845 GatB domain RD11_RS17590 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD11_RS17615 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS17635 SM01236 RD11_RS17635 RD11_RS17650 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS17650 SM00895 RD11_RS17650 RD11_RS17695 SM00965 Secretin and TonB N terminus short domain RD11_RS17715 SM00382 ATPases associated with a variety of cellular activities RD11_RS17740 SM00267 diguanylate cyclase RD11_RS17770 SM00849 Metallo-beta-lactamase superfamily RD11_RS17820 SM00563 Phosphate acyltransferases RD11_RS17835 SM00732 Likely ribonuclease with RNase H fold. RD11_RS17905 SM00382 ATPases associated with a variety of cellular activities RD11_RS17910 SM00382 ATPases associated with a variety of cellular activities RD11_RS17935 SM00347 helix_turn_helix multiple antibiotic resistance protein RD11_RS17985 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS17995 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS18025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD11_RS18085 SM01018 B12 binding domain RD11_RS18165 SM00838 Elongation factor G C-terminus RD11_RS18165 SM00889 Elongation factor G, domain IV RD11_RS18175 SM01403 RD11_RS18175 RD11_RS18195 SM01382 RD11_RS18195 RD11_RS18195 SM01383 RD11_RS18195 RD11_RS18210 SM00322 K homology RNA-binding domain RD11_RS18245 SM01374 RD11_RS18245 RD11_RS18320 SM00363 S4 RNA-binding domain RD11_RS18320 SM01390 RD11_RS18320 RD11_RS18325 SM00662 RNA polymerases D RD11_RS18355 SM01004 Delta-aminolevulinic acid dehydratase RD11_RS18385 SM01219 RD11_RS18385 RD11_RS18405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD11_RS18455 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS18455 SM00866 RD11_RS18455 RD11_RS18500 SM00382 ATPases associated with a variety of cellular activities RD11_RS18525 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS18525 SM00895 RD11_RS18525 RD11_RS18555 SM01130 RD11_RS18555 RD11_RS18565 SM00257 Lysin motif RD11_RS18615 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS18625 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS18630 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD11_RS18645 SM00382 ATPases associated with a variety of cellular activities RD11_RS18660 SM00829 Enoylreductase RD11_RS18710 SM00382 ATPases associated with a variety of cellular activities RD11_RS18760 SM00984 UDP binding domain RD11_RS18850 SM00100 Cyclic nucleotide-monophosphate binding domain RD11_RS18875 SM00829 Enoylreductase RD11_RS18905 SM00382 ATPases associated with a variety of cellular activities RD11_RS19015 SM00530 Helix-turn-helix XRE-family like proteins RD11_RS19105 SM00342 helix_turn_helix, arabinose operon control protein RD11_RS19220 SM00421 helix_turn_helix, Lux Regulon RD11_RS19260 SM00382 ATPases associated with a variety of cellular activities RD11_RS19275 SM00062 Bacterial periplasmic substrate-binding proteins RD11_RS19280 SM00382 ATPases associated with a variety of cellular activities RD11_RS19300 SM00478 endonuclease III RD11_RS19305 SM00530 Helix-turn-helix XRE-family like proteins RD11_RS19380 SM01060 RD11_RS19380 RD11_RS19390 SM00382 ATPases associated with a variety of cellular activities RD11_RS19410 SM00382 ATPases associated with a variety of cellular activities RD11_RS19415 SM00382 ATPases associated with a variety of cellular activities RD11_RS19445 SM00448 cheY-homologous receiver domain RD11_RS19445 SM00862 Transcriptional regulatory protein, C terminal RD11_RS19450 SM00387 Histidine kinase-like ATPases RD11_RS19450 SM00388 His Kinase A (phosphoacceptor) domain RD11_RS19475 SM00357 Cold shock protein domain