RD12_RS00005 PF01134 Glucose inhibited division protein A RD12_RS00005 PF13932 GidA associated domain 3 RD12_RS00010 PF02527 rRNA small subunit methyltransferase G RD12_RS00015 PF13614 AAA domain RD12_RS00020 PF00583 Acetyltransferase (GNAT) family RD12_RS00025 PF02195 ParB-like nuclease domain RD12_RS00030 PF00710 Asparaginase RD12_RS00055 PF00009 Elongation factor Tu GTP binding domain RD12_RS00055 PF03143 Elongation factor Tu C-terminal domain RD12_RS00055 PF03144 Elongation factor Tu domain 2 RD12_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RD12_RS00070 PF00467 KOW motif RD12_RS00070 PF02357 Transcription termination factor nusG RD12_RS00075 PF00298 Ribosomal protein L11, RNA binding domain RD12_RS00075 PF03946 Ribosomal protein L11, N-terminal domain RD12_RS00080 PF00687 Ribosomal protein L1p/L10e family RD12_RS00085 PF00466 Ribosomal protein L10 RD12_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain RD12_RS00090 PF16320 RD12_RS00090 RD12_RS00095 PF00562 RNA polymerase Rpb2, domain 6 RD12_RS00095 PF04560 RNA polymerase Rpb2, domain 7 RD12_RS00095 PF04561 RNA polymerase Rpb2, domain 2 RD12_RS00095 PF04563 RNA polymerase beta subunit RD12_RS00095 PF04565 RNA polymerase Rpb2, domain 3 RD12_RS00095 PF10385 RNA polymerase beta subunit external 1 domain RD12_RS00100 PF00623 RNA polymerase Rpb1, domain 2 RD12_RS00100 PF04983 RNA polymerase Rpb1, domain 3 RD12_RS00100 PF04997 RNA polymerase Rpb1, domain 1 RD12_RS00100 PF04998 RNA polymerase Rpb1, domain 5 RD12_RS00100 PF05000 RNA polymerase Rpb1, domain 4 RD12_RS00120 PF01476 LysM domain RD12_RS00120 PF04773 FecR protein RD12_RS00130 PF00072 Response regulator receiver domain RD12_RS00130 PF00486 Transcriptional regulatory protein, C terminal RD12_RS00135 PF00665 Integrase core domain RD12_RS00135 PF13011 RD12_RS00135 RD12_RS00140 PF02515 CoA-transferase family III RD12_RS00145 PF01796 RD12_RS00145 RD12_RS00145 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) RD12_RS00150 PF00108 Thiolase, N-terminal domain RD12_RS00155 PF01575 MaoC like domain RD12_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS00160 PF03466 LysR substrate binding domain RD12_RS00165 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS00170 PF03972 MmgE/PrpD family RD12_RS00175 PF00665 Integrase core domain RD12_RS00175 PF13011 RD12_RS00175 RD12_RS00180 PF07690 Major Facilitator Superfamily RD12_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit RD12_RS00190 PF02092 RD12_RS00190 RD12_RS00190 PF05746 DALR anticodon binding domain RD12_RS00195 PF13242 HAD-hyrolase-like RD12_RS00200 PF01553 Acyltransferase RD12_RS00205 PF01863 Protein of unknown function DUF45 RD12_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD12_RS00215 PF01327 Polypeptide deformylase RD12_RS00225 PF00665 Integrase core domain RD12_RS00225 PF13011 RD12_RS00225 RD12_RS00240 PF00196 Bacterial regulatory proteins, luxR family RD12_RS00245 PF03547 RD12_RS00245 RD12_RS00250 PF02615 Malate/L-lactate dehydrogenase RD12_RS00255 PF00665 Integrase core domain RD12_RS00255 PF13011 RD12_RS00255 RD12_RS00260 PF00561 alpha/beta hydrolase fold RD12_RS00265 PF07021 Methionine biosynthesis protein MetW RD12_RS00270 PF00665 Integrase core domain RD12_RS00270 PF13011 RD12_RS00270 RD12_RS00275 PF07690 Major Facilitator Superfamily RD12_RS00285 PF01177 Asp/Glu/Hydantoin racemase RD12_RS00290 PF00005 ABC transporter RD12_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS00310 PF00665 Integrase core domain RD12_RS00310 PF13011 RD12_RS00310 RD12_RS00320 PF07804 HipA-like C-terminal domain RD12_RS00320 PF07805 HipA-like N-terminal domain RD12_RS00320 PF13657 HipA N-terminal domain RD12_RS00325 PF13560 Helix-turn-helix domain RD12_RS00335 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS00340 PF01965 DJ-1/PfpI family RD12_RS00345 PF00355 Rieske [2Fe-2S] domain RD12_RS00350 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS00350 PF00175 Oxidoreductase NAD-binding domain RD12_RS00350 PF00970 Oxidoreductase FAD-binding domain RD12_RS00355 PF06808 RD12_RS00355 RD12_RS00365 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS00370 PF00866 Ring hydroxylating beta subunit RD12_RS00375 PF00665 Integrase core domain RD12_RS00375 PF13011 RD12_RS00375 RD12_RS00380 PF06627 Protein of unknown function (DUF1153) RD12_RS00385 PF00665 Integrase core domain RD12_RS00395 PF00183 Hsp90 protein RD12_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS00400 PF00043 Glutathione S-transferase, C-terminal domain RD12_RS00400 PF13417 Glutathione S-transferase, N-terminal domain RD12_RS00405 PF01510 N-acetylmuramoyl-L-alanine amidase RD12_RS00415 PF01578 RD12_RS00415 RD12_RS00420 PF00448 SRP54-type protein, GTPase domain RD12_RS00420 PF02881 SRP54-type protein, helical bundle domain RD12_RS00420 PF02978 Signal peptide binding domain RD12_RS00425 PF00665 Integrase core domain RD12_RS00425 PF13011 RD12_RS00425 RD12_RS00430 PF00665 Integrase core domain RD12_RS00430 PF13011 RD12_RS00430 RD12_RS00435 PF02719 Polysaccharide biosynthesis protein RD12_RS00435 PF13727 CoA-binding domain RD12_RS00445 PF10997 RD12_RS00445 RD12_RS00450 PF00534 Glycosyl transferases group 1 RD12_RS00450 PF13477 Glycosyl transferase 4-like RD12_RS00455 PF02397 RD12_RS00455 RD12_RS00460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD12_RS00465 PF13579 Glycosyl transferase 4-like domain RD12_RS00465 PF13692 Glycosyl transferases group 1 RD12_RS00470 PF02350 UDP-N-acetylglucosamine 2-epimerase RD12_RS00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD12_RS00480 PF00132 Bacterial transferase hexapeptide (six repeats) RD12_RS00485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD12_RS00485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD12_RS00490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD12_RS00495 PF00534 Glycosyl transferases group 1 RD12_RS00495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RD12_RS00505 PF03309 Type III pantothenate kinase RD12_RS00510 PF02237 Biotin protein ligase C terminal domain RD12_RS00510 PF03099 Biotin/lipoate A/B protein ligase family RD12_RS00515 PF02405 RD12_RS00515 RD12_RS00520 PF00005 ABC transporter RD12_RS00535 PF03886 Protein of unknown function (DUF330) RD12_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase RD12_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain RD12_RS00550 PF01063 Aminotransferase class IV RD12_RS00555 PF04359 Protein of unknown function (DUF493) RD12_RS00560 PF03099 Biotin/lipoate A/B protein ligase family RD12_RS00565 PF04055 Radical SAM superfamily RD12_RS00565 PF16881 RD12_RS00565 RD12_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RD12_RS00575 PF04321 RmlD substrate binding domain RD12_RS00580 PF16363 RD12_RS00580 RD12_RS00585 PF00665 Integrase core domain RD12_RS00585 PF13011 RD12_RS00585 RD12_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme RD12_RS00600 PF00085 Thioredoxin RD12_RS00600 PF01323 DSBA-like thioredoxin domain RD12_RS00605 PF05036 Sporulation related domain RD12_RS00610 PF00750 tRNA synthetases class I (R) RD12_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain RD12_RS00610 PF05746 DALR anticodon binding domain RD12_RS00615 PF08895 RD12_RS00615 RD12_RS00625 PF01548 RD12_RS00625 RD12_RS00625 PF02371 RD12_RS00625 RD12_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS00640 PF13416 Bacterial extracellular solute-binding protein RD12_RS00645 PF00005 ABC transporter RD12_RS00645 PF08402 TOBE domain RD12_RS00650 PF00149 Calcineurin-like phosphoesterase RD12_RS00655 PF00665 Integrase core domain RD12_RS00655 PF13011 RD12_RS00655 RD12_RS00660 PF00005 ABC transporter RD12_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS00675 PF13343 Bacterial extracellular solute-binding protein RD12_RS00680 PF13377 Periplasmic binding protein-like domain RD12_RS00690 PF01425 Amidase RD12_RS00695 PF00682 HMGL-like RD12_RS00695 PF08502 LeuA allosteric (dimerisation) domain RD12_RS00705 PF00309 RD12_RS00705 RD12_RS00705 PF04552 Sigma-54, DNA binding domain RD12_RS00705 PF04963 Sigma-54 factor, core binding domain RD12_RS00710 PF04324 BFD-like [2Fe-2S] binding domain RD12_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS00715 PF03466 LysR substrate binding domain RD12_RS00725 PF00665 Integrase core domain RD12_RS00725 PF13011 RD12_RS00725 RD12_RS00730 PF13609 Gram-negative porin RD12_RS00735 PF00291 Pyridoxal-phosphate dependent enzyme RD12_RS00735 PF00585 C-terminal regulatory domain of Threonine dehydratase RD12_RS00745 PF01565 FAD binding domain RD12_RS00745 PF02754 RD12_RS00745 RD12_RS00745 PF02913 FAD linked oxidases, C-terminal domain RD12_RS00745 PF11880 RD12_RS00745 RD12_RS00745 PF12447 RD12_RS00745 RD12_RS00745 PF13183 4Fe-4S dicluster domain RD12_RS00750 PF00392 Bacterial regulatory proteins, gntR family RD12_RS00750 PF07729 FCD domain RD12_RS00755 PF02515 CoA-transferase family III RD12_RS00760 PF07859 alpha/beta hydrolase fold RD12_RS00765 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS00770 PF01494 FAD binding domain RD12_RS00775 PF01494 FAD binding domain RD12_RS00780 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS00785 PF01614 Bacterial transcriptional regulator RD12_RS00785 PF09339 IclR helix-turn-helix domain RD12_RS00790 PF03746 LamB/YcsF family RD12_RS00795 PF02626 Allophanate hydrolase subunit 2 RD12_RS00800 PF02682 Allophanate hydrolase subunit 1 RD12_RS00805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD12_RS00810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS00810 PF03466 LysR substrate binding domain RD12_RS00815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD12_RS00815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD12_RS00820 PF04214 RD12_RS00820 RD12_RS00825 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS00825 PF00672 HAMP domain RD12_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS00830 PF00072 Response regulator receiver domain RD12_RS00830 PF00486 Transcriptional regulatory protein, C terminal RD12_RS00835 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS00835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS00835 PF11808 RD12_RS00835 RD12_RS00840 PF00072 Response regulator receiver domain RD12_RS00840 PF00486 Transcriptional regulatory protein, C terminal RD12_RS00845 PF01209 ubiE/COQ5 methyltransferase family RD12_RS00850 PF04280 Tim44-like domain RD12_RS00855 PF02036 SCP-2 sterol transfer family RD12_RS00860 PF03109 RD12_RS00860 RD12_RS00870 PF00665 Integrase core domain RD12_RS00870 PF13011 RD12_RS00870 RD12_RS00875 PF00005 ABC transporter RD12_RS00875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS00880 PF04536 TLP18 RD12_RS00885 PF04011 LemA family RD12_RS00890 PF00270 DEAD/DEAH box helicase RD12_RS00890 PF00271 Helicase conserved C-terminal domain RD12_RS00895 PF01810 RD12_RS00895 RD12_RS00900 PF00009 Elongation factor Tu GTP binding domain RD12_RS00900 PF03144 Elongation factor Tu domain 2 RD12_RS00900 PF16658 RD12_RS00900 RD12_RS00910 PF00210 Ferritin-like domain RD12_RS00915 PF00665 Integrase core domain RD12_RS00915 PF13011 RD12_RS00915 RD12_RS00925 PF03724 META domain RD12_RS00930 PF03724 META domain RD12_RS00930 PF14302 RD12_RS00930 RD12_RS00935 PF00581 Rhodanese-like domain RD12_RS00940 PF01588 Putative tRNA binding domain RD12_RS00940 PF09334 tRNA synthetases class I (M) RD12_RS00950 PF01883 Domain of unknown function DUF59 RD12_RS00950 PF10609 ParA/MinD ATPase like RD12_RS00955 PF01103 Surface antigen RD12_RS00960 PF04357 RD12_RS00960 RD12_RS00965 PF00692 dUTPase RD12_RS00970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD12_RS00975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD12_RS00980 PF00583 Acetyltransferase (GNAT) family RD12_RS00990 PF01276 Orn/Lys/Arg decarboxylase, major domain RD12_RS00990 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RD12_RS00990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RD12_RS00995 PF03486 HI0933-like protein RD12_RS01000 PF00665 Integrase core domain RD12_RS01000 PF13011 RD12_RS01000 RD12_RS01005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD12_RS01005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD12_RS01010 PF02535 RD12_RS01010 RD12_RS01015 PF01571 Aminomethyltransferase folate-binding domain RD12_RS01015 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD12_RS01020 PF01597 Glycine cleavage H-protein RD12_RS01025 PF02347 Glycine cleavage system P-protein RD12_RS01030 PF00392 Bacterial regulatory proteins, gntR family RD12_RS01030 PF07729 FCD domain RD12_RS01035 PF02515 CoA-transferase family III RD12_RS01040 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS01045 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS01050 PF00665 Integrase core domain RD12_RS01050 PF13011 RD12_RS01050 RD12_RS01055 PF07769 RD12_RS01055 RD12_RS01060 PF04199 Putative cyclase RD12_RS01065 PF00561 alpha/beta hydrolase fold RD12_RS01070 PF03795 YCII-related domain RD12_RS01075 PF02426 Muconolactone delta-isomerase RD12_RS01080 PF01144 Coenzyme A transferase RD12_RS01085 PF01144 Coenzyme A transferase RD12_RS01090 PF01614 Bacterial transcriptional regulator RD12_RS01090 PF09339 IclR helix-turn-helix domain RD12_RS01095 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS01100 PF02667 RD12_RS01100 RD12_RS01105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD12_RS01105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD12_RS01110 PF00082 Subtilase family RD12_RS01110 PF03797 Autotransporter beta-domain RD12_RS01110 PF12951 RD12_RS01110 RD12_RS01115 PF00311 Phosphoenolpyruvate carboxylase RD12_RS01120 PF06508 Queuosine biosynthesis protein QueC RD12_RS01125 PF13420 Acetyltransferase (GNAT) domain RD12_RS01135 PF00665 Integrase core domain RD12_RS01135 PF13011 RD12_RS01135 RD12_RS01140 PF00392 Bacterial regulatory proteins, gntR family RD12_RS01140 PF07729 FCD domain RD12_RS01145 PF01565 FAD binding domain RD12_RS01145 PF02913 FAD linked oxidases, C-terminal domain RD12_RS01150 PF00171 Aldehyde dehydrogenase family RD12_RS01155 PF01964 ThiC family RD12_RS01155 PF13667 ThiC-associated domain RD12_RS01165 PF09518 HindIII restriction endonuclease RD12_RS01170 PF00665 Integrase core domain RD12_RS01170 PF13011 RD12_RS01170 RD12_RS01175 PF00665 Integrase core domain RD12_RS01175 PF13011 RD12_RS01175 RD12_RS01180 PF00665 Integrase core domain RD12_RS01180 PF13011 RD12_RS01180 RD12_RS01185 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS01195 PF02627 Carboxymuconolactone decarboxylase family RD12_RS01200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD12_RS01200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD12_RS01205 PF00392 Bacterial regulatory proteins, gntR family RD12_RS01205 PF07729 FCD domain RD12_RS01210 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS01215 PF04290 RD12_RS01215 RD12_RS01215 PF06808 RD12_RS01215 RD12_RS01225 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS01230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RD12_RS01235 PF01743 Poly A polymerase head domain RD12_RS01235 PF12626 Polymerase A arginine-rich C-terminus RD12_RS01235 PF12627 Probable RNA and SrmB- binding site of polymerase A RD12_RS01240 PF12710 haloacid dehalogenase-like hydrolase RD12_RS01245 PF00308 Bacterial dnaA protein RD12_RS01250 PF00586 AIR synthase related protein, N-terminal domain RD12_RS01250 PF02769 AIR synthase related protein, C-terminal domain RD12_RS01255 PF01715 IPP transferase RD12_RS01260 PF01119 DNA mismatch repair protein, C-terminal domain RD12_RS01260 PF08676 MutL C terminal dimerisation domain RD12_RS01260 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS01265 PF09335 RD12_RS01265 RD12_RS01270 PF01520 N-acetylmuramoyl-L-alanine amidase RD12_RS01270 PF11741 AMIN domain RD12_RS01275 PF02367 Uncharacterised P-loop hydrolase UPF0079 RD12_RS01280 PF00206 Lyase RD12_RS01280 PF10415 Fumarase C C-terminus RD12_RS01285 PF03547 RD12_RS01285 RD12_RS01290 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS01295 PF03466 LysR substrate binding domain RD12_RS01300 PF01019 Gamma-glutamyltranspeptidase RD12_RS01305 PF02515 CoA-transferase family III RD12_RS01310 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS01315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS01320 PF00665 Integrase core domain RD12_RS01320 PF13011 RD12_RS01320 RD12_RS01325 PF00593 TonB dependent receptor RD12_RS01330 PF12802 MarR family RD12_RS01335 PF01654 RD12_RS01335 RD12_RS01340 PF02322 RD12_RS01340 RD12_RS01345 PF08173 RD12_RS01345 RD12_RS01350 PF00005 ABC transporter RD12_RS01350 PF00664 ABC transporter transmembrane region RD12_RS01355 PF00005 ABC transporter RD12_RS01355 PF00664 ABC transporter transmembrane region RD12_RS01360 PF00156 Phosphoribosyl transferase domain RD12_RS01370 PF13663 RD12_RS01370 RD12_RS01375 PF13609 Gram-negative porin RD12_RS01380 PF00665 Integrase core domain RD12_RS01380 PF13011 RD12_RS01380 RD12_RS01385 PF13986 RD12_RS01385 RD12_RS01400 PF04386 Stringent starvation protein B RD12_RS01405 PF13410 Glutathione S-transferase, C-terminal domain RD12_RS01405 PF13417 Glutathione S-transferase, N-terminal domain RD12_RS01410 PF02167 Cytochrome C1 family RD12_RS01415 PF00032 Cytochrome b(C-terminal)/b6/petD RD12_RS01415 PF00033 Cytochrome b(N-terminal)/b6/petB RD12_RS01420 PF00355 Rieske [2Fe-2S] domain RD12_RS01425 PF01741 Large-conductance mechanosensitive channel, MscL RD12_RS01430 PF01784 NIF3 (NGG1p interacting factor 3) RD12_RS01435 PF13180 PDZ domain RD12_RS01435 PF13365 Trypsin-like peptidase domain RD12_RS01440 PF00665 Integrase core domain RD12_RS01440 PF13011 RD12_RS01440 RD12_RS01445 PF04299 Putative FMN-binding domain RD12_RS01450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD12_RS01455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS01460 PF07859 alpha/beta hydrolase fold RD12_RS01465 PF02311 AraC-like ligand binding domain RD12_RS01465 PF12833 Helix-turn-helix domain RD12_RS01470 PF00682 HMGL-like RD12_RS01475 PF02311 AraC-like ligand binding domain RD12_RS01475 PF12833 Helix-turn-helix domain RD12_RS01480 PF00920 Dehydratase family RD12_RS01485 PF07690 Major Facilitator Superfamily RD12_RS01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS01490 PF03466 LysR substrate binding domain RD12_RS01500 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) RD12_RS01505 PF00665 Integrase core domain RD12_RS01505 PF13011 RD12_RS01505 RD12_RS01515 PF00665 Integrase core domain RD12_RS01515 PF13011 RD12_RS01515 RD12_RS01525 PF01047 MarR family RD12_RS01530 PF07859 alpha/beta hydrolase fold RD12_RS01535 PF13458 Periplasmic binding protein RD12_RS01540 PF02653 RD12_RS01540 RD12_RS01545 PF02653 RD12_RS01545 RD12_RS01550 PF00005 ABC transporter RD12_RS01550 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS01555 PF00005 ABC transporter RD12_RS01570 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS01575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS01575 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS01575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS01580 PF00501 AMP-binding enzyme RD12_RS01580 PF13193 AMP-binding enzyme C-terminal domain RD12_RS01585 PF13279 Thioesterase-like superfamily RD12_RS01590 PF01042 Endoribonuclease L-PSP RD12_RS01595 PF03961 RD12_RS01595 RD12_RS01600 PF00202 Aminotransferase class-III RD12_RS01605 PF02581 Thiamine monophosphate synthase/TENI RD12_RS01610 PF08543 Phosphomethylpyrimidine kinase RD12_RS01615 PF00301 Rubredoxin RD12_RS01620 PF02622 Uncharacterized ACR, COG1678 RD12_RS01625 PF03652 Uncharacterised protein family (UPF0081) RD12_RS01630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD12_RS01630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD12_RS01635 PF01979 Amidohydrolase family RD12_RS01640 PF01553 Acyltransferase RD12_RS01645 PF00149 Calcineurin-like phosphoesterase RD12_RS01650 PF03739 RD12_RS01650 RD12_RS01655 PF00912 Transglycosylase RD12_RS01660 PF00665 Integrase core domain RD12_RS01660 PF13011 RD12_RS01660 RD12_RS01670 PF00501 AMP-binding enzyme RD12_RS01670 PF13193 AMP-binding enzyme C-terminal domain RD12_RS01675 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS01680 PF01796 RD12_RS01680 RD12_RS01680 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) RD12_RS01690 PF12706 Beta-lactamase superfamily domain RD12_RS01695 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS01700 PF03466 LysR substrate binding domain RD12_RS01705 PF11737 RD12_RS01705 RD12_RS01710 PF11453 RD12_RS01710 RD12_RS01715 PF00990 GGDEF domain RD12_RS01720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD12_RS01725 PF13532 2OG-Fe(II) oxygenase superfamily RD12_RS01730 PF09859 RD12_RS01730 RD12_RS01735 PF04463 RD12_RS01735 RD12_RS01740 PF00005 ABC transporter RD12_RS01745 PF01032 FecCD transport family RD12_RS01750 PF01497 Periplasmic binding protein RD12_RS01755 PF05171 Haemin-degrading HemS RD12_RS01760 PF00593 TonB dependent receptor RD12_RS01760 PF07660 Secretin and TonB N terminus short domain RD12_RS01760 PF07715 TonB-dependent Receptor Plug Domain RD12_RS01765 PF04773 FecR protein RD12_RS01765 PF16220 RD12_RS01765 RD12_RS01770 PF04542 Sigma-70 region 2 RD12_RS01770 PF08281 Sigma-70, region 4 RD12_RS01780 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS01790 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS01795 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD12_RS01800 PF00665 Integrase core domain RD12_RS01800 PF13011 RD12_RS01800 RD12_RS01805 PF00392 Bacterial regulatory proteins, gntR family RD12_RS01805 PF07729 FCD domain RD12_RS01810 PF01925 RD12_RS01810 RD12_RS01820 PF14518 Iron-containing redox enzyme RD12_RS01825 PF00171 Aldehyde dehydrogenase family RD12_RS01830 PF03928 Domain of unknown function (DUF336) RD12_RS01835 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS01835 PF00175 Oxidoreductase NAD-binding domain RD12_RS01835 PF00970 Oxidoreductase FAD-binding domain RD12_RS01840 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS01845 PF10282 Lactonase, 7-bladed beta-propeller RD12_RS01850 PF00665 Integrase core domain RD12_RS01850 PF13011 RD12_RS01850 RD12_RS01855 PF00582 Universal stress protein family RD12_RS01860 PF03458 RD12_RS01860 RD12_RS01865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD12_RS01865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD12_RS01870 PF03372 Endonuclease/Exonuclease/phosphatase family RD12_RS01875 PF00156 Phosphoribosyl transferase domain RD12_RS01880 PF02637 GatB domain RD12_RS01880 PF02934 GatB/GatE catalytic domain RD12_RS01885 PF01425 Amidase RD12_RS01890 PF02686 Glu-tRNAGln amidotransferase C subunit RD12_RS01895 PF06723 MreB/Mbl protein RD12_RS01900 PF04085 rod shape-determining protein MreC RD12_RS01905 PF04093 RD12_RS01905 RD12_RS01910 PF00905 Penicillin binding protein transpeptidase domain RD12_RS01910 PF03717 Penicillin-binding Protein dimerisation domain RD12_RS01915 PF01098 RD12_RS01915 RD12_RS01920 PF02615 Malate/L-lactate dehydrogenase RD12_RS01925 PF00939 Sodium:sulfate symporter transmembrane region RD12_RS01930 PF00440 Bacterial regulatory proteins, tetR family RD12_RS01935 PF13419 Haloacid dehalogenase-like hydrolase RD12_RS01940 PF00696 Amino acid kinase family RD12_RS01945 PF03180 NLPA lipoprotein RD12_RS01950 PF08534 Redoxin RD12_RS01955 PF04972 BON domain RD12_RS01960 PF13580 SIS domain RD12_RS01965 PF02021 Uncharacterised protein family UPF0102 RD12_RS01970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD12_RS01975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD12_RS01980 PF00665 Integrase core domain RD12_RS01980 PF13011 RD12_RS01980 RD12_RS01990 PF00462 Glutaredoxin RD12_RS01995 PF02515 CoA-transferase family III RD12_RS02000 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02005 PF02515 CoA-transferase family III RD12_RS02020 PF00581 Rhodanese-like domain RD12_RS02025 PF01614 Bacterial transcriptional regulator RD12_RS02025 PF09339 IclR helix-turn-helix domain RD12_RS02030 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS02035 PF00665 Integrase core domain RD12_RS02035 PF13011 RD12_RS02035 RD12_RS02040 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02045 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS02050 PF02515 CoA-transferase family III RD12_RS02055 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS02055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS02055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS02060 PF03466 LysR substrate binding domain RD12_RS02065 PF00581 Rhodanese-like domain RD12_RS02070 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02085 PF00665 Integrase core domain RD12_RS02085 PF13011 RD12_RS02085 RD12_RS02090 PF00892 EamA-like transporter family RD12_RS02095 PF01810 RD12_RS02095 RD12_RS02100 PF12146 Putative lysophospholipase RD12_RS02105 PF05232 RD12_RS02105 RD12_RS02110 PF04794 YdjC-like protein RD12_RS02115 PF13231 RD12_RS02115 RD12_RS02120 PF00535 Glycosyl transferase family 2 RD12_RS02125 PF00583 Acetyltransferase (GNAT) family RD12_RS02130 PF00665 Integrase core domain RD12_RS02130 PF13011 RD12_RS02130 RD12_RS02135 PF03616 RD12_RS02135 RD12_RS02140 PF16868 RD12_RS02140 RD12_RS02145 PF02667 RD12_RS02145 RD12_RS02160 PF00929 Exonuclease RD12_RS02165 PF00873 AcrB/AcrD/AcrF family RD12_RS02170 PF00665 Integrase core domain RD12_RS02170 PF13011 RD12_RS02170 RD12_RS02175 PF01989 Protein of unknown function DUF126 RD12_RS02180 PF04412 RD12_RS02180 RD12_RS02185 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS02190 PF03466 LysR substrate binding domain RD12_RS02195 PF01565 FAD binding domain RD12_RS02195 PF09330 D-lactate dehydrogenase, membrane binding RD12_RS02200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS02200 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS02200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS02205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS02205 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS02205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS02210 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02215 PF01546 Peptidase family M20/M25/M40 RD12_RS02215 PF07687 Peptidase dimerisation domain RD12_RS02220 PF06267 Family of unknown function (DUF1028) RD12_RS02225 PF01042 Endoribonuclease L-PSP RD12_RS02230 PF13738 Pyridine nucleotide-disulphide oxidoreductase RD12_RS02235 PF00107 Zinc-binding dehydrogenase RD12_RS02240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS02240 PF03466 LysR substrate binding domain RD12_RS02245 PF13380 CoA binding domain RD12_RS02245 PF13549 ATP-grasp domain RD12_RS02245 PF13607 Succinyl-CoA ligase like flavodoxin domain RD12_RS02250 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS02255 PF09084 NMT1/THI5 like RD12_RS02260 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02265 PF01370 NAD dependent epimerase/dehydratase family RD12_RS02270 PF01380 SIS domain RD12_RS02270 PF13522 Glutamine amidotransferase domain RD12_RS02275 PF01037 AsnC family RD12_RS02275 PF13412 Winged helix-turn-helix DNA-binding RD12_RS02280 PF00108 Thiolase, N-terminal domain RD12_RS02280 PF02803 Thiolase, C-terminal domain RD12_RS02285 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS02285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD12_RS02285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD12_RS02290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS02290 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS02295 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02300 PF13380 CoA binding domain RD12_RS02300 PF13549 ATP-grasp domain RD12_RS02300 PF13607 Succinyl-CoA ligase like flavodoxin domain RD12_RS02305 PF00285 Citrate synthase RD12_RS02310 PF01614 Bacterial transcriptional regulator RD12_RS02310 PF09339 IclR helix-turn-helix domain RD12_RS02315 PF00384 Molybdopterin oxidoreductase RD12_RS02315 PF01568 Molydopterin dinucleotide binding domain RD12_RS02320 PF00665 Integrase core domain RD12_RS02320 PF13011 RD12_RS02320 RD12_RS02330 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RD12_RS02330 PF01488 Shikimate / quinate 5-dehydrogenase RD12_RS02330 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RD12_RS02335 PF00472 RF-1 domain RD12_RS02335 PF03462 PCRF domain RD12_RS02340 PF05175 Methyltransferase small domain RD12_RS02345 PF00462 Glutaredoxin RD12_RS02350 PF02441 Flavoprotein RD12_RS02355 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02360 PF09084 NMT1/THI5 like RD12_RS02365 PF00941 FAD binding domain in molybdopterin dehydrogenase RD12_RS02365 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD12_RS02370 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS02370 PF01799 [2Fe-2S] binding domain RD12_RS02375 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD12_RS02375 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD12_RS02380 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) RD12_RS02390 PF00665 Integrase core domain RD12_RS02390 PF13011 RD12_RS02390 RD12_RS02395 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel RD12_RS02395 PF05036 Sporulation related domain RD12_RS02400 PF03668 RD12_RS02400 RD12_RS02410 PF00034 Cytochrome c RD12_RS02410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD12_RS02415 PF02603 HPr Serine kinase N terminus RD12_RS02415 PF07475 HPr Serine kinase C-terminal domain RD12_RS02420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RD12_RS02425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RD12_RS02430 PF00005 ABC transporter RD12_RS02430 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS02435 PF03968 OstA-like protein RD12_RS02440 PF06835 Lipopolysaccharide-assembly, LptC-related RD12_RS02445 PF08282 haloacid dehalogenase-like hydrolase RD12_RS02450 PF00571 CBS domain RD12_RS02450 PF01380 SIS domain RD12_RS02455 PF01370 NAD dependent epimerase/dehydratase family RD12_RS02455 PF02222 ATP-grasp domain RD12_RS02460 PF00593 TonB dependent receptor RD12_RS02460 PF07715 TonB-dependent Receptor Plug Domain RD12_RS02465 PF00665 Integrase core domain RD12_RS02465 PF13011 RD12_RS02465 RD12_RS02470 PF00732 GMC oxidoreductase RD12_RS02470 PF05199 GMC oxidoreductase RD12_RS02475 PF07399 RD12_RS02475 RD12_RS02480 PF09723 RD12_RS02480 RD12_RS02485 PF04367 RD12_RS02485 RD12_RS02490 PF00152 tRNA synthetases class II (D, K and N) RD12_RS02490 PF01336 OB-fold nucleic acid binding domain RD12_RS02490 PF02938 GAD domain RD12_RS02495 PF03372 Endonuclease/Exonuclease/phosphatase family RD12_RS02500 PF13091 PLD-like domain RD12_RS02505 PF00892 EamA-like transporter family RD12_RS02515 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) RD12_RS02520 PF00665 Integrase core domain RD12_RS02520 PF13011 RD12_RS02520 RD12_RS02525 PF13458 Periplasmic binding protein RD12_RS02530 PF01425 Amidase RD12_RS02535 PF05995 Cysteine dioxygenase type I RD12_RS02540 PF01614 Bacterial transcriptional regulator RD12_RS02540 PF09339 IclR helix-turn-helix domain RD12_RS02555 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS02560 PF05275 RD12_RS02560 RD12_RS02565 PF00394 Multicopper oxidase RD12_RS02565 PF07731 Multicopper oxidase RD12_RS02565 PF07732 Multicopper oxidase RD12_RS02570 PF00127 Copper binding proteins, plastocyanin/azurin family RD12_RS02575 PF00665 Integrase core domain RD12_RS02575 PF13011 RD12_RS02575 RD12_RS02580 PF00665 Integrase core domain RD12_RS02580 PF13011 RD12_RS02580 RD12_RS02590 PF00665 Integrase core domain RD12_RS02590 PF13011 RD12_RS02590 RD12_RS02595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD12_RS02595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD12_RS02600 PF02515 CoA-transferase family III RD12_RS02605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS02605 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS02605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS02610 PF00440 Bacterial regulatory proteins, tetR family RD12_RS02615 PF03060 Nitronate monooxygenase RD12_RS02620 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS02625 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS02630 PF01256 Carbohydrate kinase RD12_RS02645 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD12_RS02650 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS02655 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS02660 PF00005 ABC transporter RD12_RS02660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS02670 PF01546 Peptidase family M20/M25/M40 RD12_RS02670 PF07687 Peptidase dimerisation domain RD12_RS02675 PF00665 Integrase core domain RD12_RS02675 PF13011 RD12_RS02675 RD12_RS02680 PF00580 UvrD/REP helicase N-terminal domain RD12_RS02680 PF13361 UvrD-like helicase C-terminal domain RD12_RS02685 PF00270 DEAD/DEAH box helicase RD12_RS02685 PF00271 Helicase conserved C-terminal domain RD12_RS02690 PF01208 Uroporphyrinogen decarboxylase (URO-D) RD12_RS02695 PF02954 Bacterial regulatory protein, Fis family RD12_RS02700 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RD12_RS02705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD12_RS02705 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD12_RS02710 PF00231 ATP synthase RD12_RS02715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD12_RS02715 PF00306 ATP synthase alpha/beta chain, C terminal domain RD12_RS02715 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD12_RS02720 PF00213 ATP synthase delta (OSCP) subunit RD12_RS02725 PF00430 ATP synthase B/B' CF(0) RD12_RS02730 PF00137 ATP synthase subunit C RD12_RS02735 PF00119 ATP synthase A chain RD12_RS02740 PF03899 RD12_RS02740 RD12_RS02745 PF06742 Protein of unknown function (DUF1214) RD12_RS02750 PF00665 Integrase core domain RD12_RS02750 PF13011 RD12_RS02750 RD12_RS02755 PF06863 Protein of unknown function (DUF1254) RD12_RS02760 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS02765 PF05299 M61 glycyl aminopeptidase RD12_RS02765 PF13180 PDZ domain RD12_RS02770 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS02775 PF02152 Dihydroneopterin aldolase RD12_RS02780 PF01171 PP-loop family RD12_RS02785 PF00665 Integrase core domain RD12_RS02785 PF13011 RD12_RS02785 RD12_RS02790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD12_RS02790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD12_RS02795 PF10411 Disulfide bond isomerase protein N-terminus RD12_RS02795 PF13098 Thioredoxin-like domain RD12_RS02800 PF01494 FAD binding domain RD12_RS02805 PF03562 MltA specific insert domain RD12_RS02805 PF06725 3D domain RD12_RS02810 PF04379 Protein of unknown function (DUF525) RD12_RS02815 PF00834 Ribulose-phosphate 3 epimerase family RD12_RS02820 PF13419 Haloacid dehalogenase-like hydrolase RD12_RS02825 PF00425 chorismate binding enzyme RD12_RS02825 PF04715 Anthranilate synthase component I, N terminal region RD12_RS02830 PF00117 Glutamine amidotransferase class-I RD12_RS02835 PF00591 Glycosyl transferase family, a/b domain RD12_RS02835 PF02885 Glycosyl transferase family, helical bundle domain RD12_RS02840 PF00218 Indole-3-glycerol phosphate synthase RD12_RS02845 PF00665 Integrase core domain RD12_RS02845 PF13011 RD12_RS02845 RD12_RS02855 PF06742 Protein of unknown function (DUF1214) RD12_RS02855 PF06863 Protein of unknown function (DUF1254) RD12_RS02860 PF00665 Integrase core domain RD12_RS02860 PF13011 RD12_RS02860 RD12_RS02865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS02865 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS02870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS02870 PF03466 LysR substrate binding domain RD12_RS02875 PF00551 Formyl transferase RD12_RS02875 PF01842 ACT domain RD12_RS02880 PF01266 FAD dependent oxidoreductase RD12_RS02885 PF01613 Flavin reductase like domain RD12_RS02890 PF01243 Pyridoxamine 5'-phosphate oxidase RD12_RS02890 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RD12_RS02895 PF04752 RD12_RS02895 RD12_RS02900 PF07690 Major Facilitator Superfamily RD12_RS02905 PF00899 ThiF family RD12_RS02910 PF00392 Bacterial regulatory proteins, gntR family RD12_RS02910 PF07702 UTRA domain RD12_RS02915 PF00501 AMP-binding enzyme RD12_RS02915 PF13193 AMP-binding enzyme C-terminal domain RD12_RS02920 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS02925 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS02930 PF01548 RD12_RS02930 RD12_RS02930 PF02371 RD12_RS02930 RD12_RS02935 PF01063 Aminotransferase class IV RD12_RS02940 PF00425 chorismate binding enzyme RD12_RS02945 PF00005 ABC transporter RD12_RS02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS02955 PF03466 LysR substrate binding domain RD12_RS02960 PF00535 Glycosyl transferase family 2 RD12_RS02965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS02970 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS02975 PF00892 EamA-like transporter family RD12_RS02980 PF00005 ABC transporter RD12_RS02985 PF00857 Isochorismatase family RD12_RS02990 PF05433 RD12_RS02990 RD12_RS02995 PF01548 RD12_RS02995 RD12_RS02995 PF02371 RD12_RS02995 RD12_RS03000 PF03776 Septum formation topological specificity factor MinE RD12_RS03005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RD12_RS03010 PF03775 Septum formation inhibitor MinC, C-terminal domain RD12_RS03010 PF05209 Septum formation inhibitor MinC, N-terminal domain RD12_RS03015 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD12_RS03015 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RD12_RS03020 PF01654 RD12_RS03020 RD12_RS03025 PF02322 RD12_RS03025 RD12_RS03030 PF00672 HAMP domain RD12_RS03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS03035 PF00072 Response regulator receiver domain RD12_RS03035 PF00486 Transcriptional regulatory protein, C terminal RD12_RS03045 PF00665 Integrase core domain RD12_RS03045 PF13011 RD12_RS03045 RD12_RS03050 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS03055 PF04391 RD12_RS03055 RD12_RS03060 PF02566 OsmC-like protein RD12_RS03065 PF01548 RD12_RS03065 RD12_RS03065 PF02371 RD12_RS03065 RD12_RS03070 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS03075 PF01464 Transglycosylase SLT domain RD12_RS03075 PF01476 LysM domain RD12_RS03080 PF00753 Metallo-beta-lactamase superfamily RD12_RS03080 PF16123 RD12_RS03080 RD12_RS03085 PF08241 Methyltransferase domain RD12_RS03090 PF00075 RNase H RD12_RS03095 PF00665 Integrase core domain RD12_RS03095 PF13011 RD12_RS03095 RD12_RS03100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD12_RS03100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD12_RS03110 PF00487 RD12_RS03110 RD12_RS03125 PF00665 Integrase core domain RD12_RS03125 PF13011 RD12_RS03125 RD12_RS03130 PF13460 NADH(P)-binding RD12_RS03135 PF01575 MaoC like domain RD12_RS03135 PF13452 N-terminal half of MaoC dehydratase RD12_RS03140 PF02803 Thiolase, C-terminal domain RD12_RS03145 PF01796 RD12_RS03145 RD12_RS03145 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) RD12_RS03150 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS03155 PF00106 short chain dehydrogenase RD12_RS03160 PF13458 Periplasmic binding protein RD12_RS03165 PF00005 ABC transporter RD12_RS03165 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS03170 PF00005 ABC transporter RD12_RS03175 PF02653 RD12_RS03175 RD12_RS03180 PF02653 RD12_RS03180 RD12_RS03185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS03185 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS03185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS03190 PF00440 Bacterial regulatory proteins, tetR family RD12_RS03195 PF00501 AMP-binding enzyme RD12_RS03195 PF14535 AMP-binding enzyme C-terminal domain RD12_RS03200 PF02515 CoA-transferase family III RD12_RS03205 PF00106 short chain dehydrogenase RD12_RS03210 PF00665 Integrase core domain RD12_RS03210 PF13011 RD12_RS03210 RD12_RS03220 PF04285 RD12_RS03220 RD12_RS03225 PF04293 RD12_RS03225 RD12_RS03230 PF07690 Major Facilitator Superfamily RD12_RS03235 PF03972 MmgE/PrpD family RD12_RS03240 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS03245 PF05034 Methylaspartate ammonia-lyase N-terminus RD12_RS03245 PF07476 Methylaspartate ammonia-lyase C-terminus RD12_RS03250 PF00392 Bacterial regulatory proteins, gntR family RD12_RS03250 PF07702 UTRA domain RD12_RS03260 PF04828 Glutathione-dependent formaldehyde-activating enzyme RD12_RS03265 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS03270 PF00376 MerR family regulatory protein RD12_RS03270 PF09278 MerR, DNA binding RD12_RS03275 PF01774 UreD urease accessory protein RD12_RS03280 PF00547 Urease, gamma subunit RD12_RS03285 PF04955 RD12_RS03285 RD12_RS03290 PF00699 Urease beta subunit RD12_RS03295 PF00449 Urease alpha-subunit, N-terminal domain RD12_RS03295 PF01979 Amidohydrolase family RD12_RS03300 PF02814 UreE urease accessory protein, N-terminal domain RD12_RS03300 PF05194 UreE urease accessory protein, C-terminal domain RD12_RS03305 PF01730 UreF RD12_RS03310 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD12_RS03315 PF00665 Integrase core domain RD12_RS03315 PF13011 RD12_RS03315 RD12_RS03320 PF07171 MlrC C-terminus RD12_RS03320 PF07364 Protein of unknown function (DUF1485) RD12_RS03330 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS03335 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS03340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS03345 PF00171 Aldehyde dehydrogenase family RD12_RS03350 PF00202 Aminotransferase class-III RD12_RS03355 PF00155 Aminotransferase class I and II RD12_RS03355 PF00392 Bacterial regulatory proteins, gntR family RD12_RS03360 PF00186 Dihydrofolate reductase RD12_RS03365 PF00303 Thymidylate synthase RD12_RS03370 PF02566 OsmC-like protein RD12_RS03375 PF03232 RD12_RS03375 RD12_RS03380 PF00953 Glycosyl transferase family 4 RD12_RS03385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD12_RS03385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD12_RS03385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD12_RS03390 PF01370 NAD dependent epimerase/dehydratase family RD12_RS03395 PF03023 RD12_RS03395 RD12_RS03400 PF00534 Glycosyl transferases group 1 RD12_RS03400 PF13439 Glycosyltransferase Family 4 RD12_RS03405 PF00733 Asparagine synthase RD12_RS03405 PF13537 Glutamine amidotransferase domain RD12_RS03410 PF00534 Glycosyl transferases group 1 RD12_RS03410 PF13579 Glycosyl transferase 4-like domain RD12_RS03415 PF13439 Glycosyltransferase Family 4 RD12_RS03415 PF13692 Glycosyl transferases group 1 RD12_RS03420 PF00534 Glycosyl transferases group 1 RD12_RS03420 PF13477 Glycosyl transferase 4-like RD12_RS03425 PF00342 Phosphoglucose isomerase RD12_RS03430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD12_RS03430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD12_RS03430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD12_RS03430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD12_RS03435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD12_RS03440 PF01565 FAD binding domain RD12_RS03440 PF02913 FAD linked oxidases, C-terminal domain RD12_RS03445 PF00072 Response regulator receiver domain RD12_RS03445 PF00486 Transcriptional regulatory protein, C terminal RD12_RS03450 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS03450 PF00672 HAMP domain RD12_RS03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS03455 PF00884 Sulfatase RD12_RS03460 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD12_RS03460 PF09298 Fumarylacetoacetase N-terminal RD12_RS03465 PF04209 homogentisate 1,2-dioxygenase RD12_RS03470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS03470 PF03466 LysR substrate binding domain RD12_RS03475 PF10932 RD12_RS03475 RD12_RS03480 PF01494 FAD binding domain RD12_RS03485 PF00753 Metallo-beta-lactamase superfamily RD12_RS03490 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RD12_RS03490 PF06827 Zinc finger found in FPG and IleRS RD12_RS03490 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RD12_RS03495 PF13432 Tetratricopeptide repeat RD12_RS03495 PF14559 Tetratricopeptide repeat RD12_RS03500 PF03550 Outer membrane lipoprotein LolB RD12_RS03505 PF00288 GHMP kinases N terminal domain RD12_RS03505 PF08544 GHMP kinases C terminal RD12_RS03515 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RD12_RS03515 PF14572 Phosphoribosyl synthetase-associated domain RD12_RS03520 PF01386 Ribosomal L25p family RD12_RS03520 PF14693 Ribosomal protein TL5, C-terminal domain RD12_RS03525 PF01195 Peptidyl-tRNA hydrolase RD12_RS03530 PF02517 CAAX protease self-immunity RD12_RS03535 PF01926 50S ribosome-binding GTPase RD12_RS03535 PF06071 Protein of unknown function (DUF933) RD12_RS03540 PF00589 Phage integrase family RD12_RS03540 PF13356 Domain of unknown function (DUF4102) RD12_RS03540 PF14659 Phage integrase, N-terminal SAM-like domain RD12_RS03545 PF02661 Fic/DOC family RD12_RS03550 PF04851 Type III restriction enzyme, res subunit RD12_RS03555 PF01555 DNA methylase RD12_RS03560 PF13304 AAA domain RD12_RS03565 PF00665 Integrase core domain RD12_RS03565 PF13011 RD12_RS03565 RD12_RS03580 PF00580 UvrD/REP helicase N-terminal domain RD12_RS03585 PF13361 UvrD-like helicase C-terminal domain RD12_RS03590 PF00665 Integrase core domain RD12_RS03590 PF13011 RD12_RS03590 RD12_RS03595 PF03797 Autotransporter beta-domain RD12_RS03595 PF12951 RD12_RS03595 RD12_RS03600 PF12951 RD12_RS03600 RD12_RS03600 PF13018 RD12_RS03600 RD12_RS03605 PF00486 Transcriptional regulatory protein, C terminal RD12_RS03615 PF00665 Integrase core domain RD12_RS03615 PF13011 RD12_RS03615 RD12_RS03620 PF00440 Bacterial regulatory proteins, tetR family RD12_RS03635 PF00665 Integrase core domain RD12_RS03635 PF13011 RD12_RS03635 RD12_RS03640 PF07883 Cupin domain RD12_RS03640 PF13411 MerR HTH family regulatory protein RD12_RS03640 PF13560 Helix-turn-helix domain RD12_RS03645 PF01266 FAD dependent oxidoreductase RD12_RS03650 PF05899 Protein of unknown function (DUF861) RD12_RS03655 PF01019 Gamma-glutamyltranspeptidase RD12_RS03660 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS03665 PF13531 Bacterial extracellular solute-binding protein RD12_RS03670 PF01810 RD12_RS03670 RD12_RS03675 PF00665 Integrase core domain RD12_RS03675 PF13011 RD12_RS03675 RD12_RS03680 PF01037 AsnC family RD12_RS03680 PF13404 AsnC-type helix-turn-helix domain RD12_RS03700 PF13663 RD12_RS03700 RD12_RS03710 PF07336 Protein of unknown function (DUF1470) RD12_RS03710 PF11706 CGNR zinc finger RD12_RS03715 PF00561 alpha/beta hydrolase fold RD12_RS03720 PF13531 Bacterial extracellular solute-binding protein RD12_RS03725 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS03730 PF00005 ABC transporter RD12_RS03730 PF03459 TOBE domain RD12_RS03735 PF13091 PLD-like domain RD12_RS03740 PF00665 Integrase core domain RD12_RS03740 PF13011 RD12_RS03740 RD12_RS03745 PF03167 Uracil DNA glycosylase superfamily RD12_RS03750 PF00270 DEAD/DEAH box helicase RD12_RS03750 PF00271 Helicase conserved C-terminal domain RD12_RS03750 PF08017 RD12_RS03750 RD12_RS03755 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase RD12_RS03760 PF01743 Poly A polymerase head domain RD12_RS03760 PF12627 Probable RNA and SrmB- binding site of polymerase A RD12_RS03765 PF01464 Transglycosylase SLT domain RD12_RS03765 PF14718 Soluble lytic murein transglycosylase L domain RD12_RS03770 PF01812 5-formyltetrahydrofolate cyclo-ligase family RD12_RS03775 PF00083 Sugar (and other) transporter RD12_RS03780 PF00850 Histone deacetylase domain RD12_RS03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS03785 PF03466 LysR substrate binding domain RD12_RS03790 PF00665 Integrase core domain RD12_RS03790 PF13011 RD12_RS03790 RD12_RS03795 PF02219 Methylenetetrahydrofolate reductase RD12_RS03800 PF04020 RD12_RS03800 RD12_RS03805 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD12_RS03805 PF05221 S-adenosyl-L-homocysteine hydrolase RD12_RS03810 PF13439 Glycosyltransferase Family 4 RD12_RS03810 PF13692 Glycosyl transferases group 1 RD12_RS03815 PF06945 RD12_RS03815 RD12_RS03820 PF00438 S-adenosylmethionine synthetase, N-terminal domain RD12_RS03820 PF02772 S-adenosylmethionine synthetase, central domain RD12_RS03820 PF02773 S-adenosylmethionine synthetase, C-terminal domain RD12_RS03825 PF03279 RD12_RS03825 RD12_RS03830 PF03279 RD12_RS03830 RD12_RS03835 PF01678 Diaminopimelate epimerase RD12_RS03840 PF04340 Protein of unknown function, DUF484 RD12_RS03845 PF00589 Phage integrase family RD12_RS03845 PF02899 Phage integrase, N-terminal SAM-like domain RD12_RS03850 PF00593 TonB dependent receptor RD12_RS03850 PF07715 TonB-dependent Receptor Plug Domain RD12_RS03855 PF03824 RD12_RS03855 RD12_RS03860 PF06226 RD12_RS03860 RD12_RS03865 PF01297 Periplasmic solute binding protein family RD12_RS03870 PF00950 RD12_RS03870 RD12_RS03875 PF00005 ABC transporter RD12_RS03885 PF01475 Ferric uptake regulator family RD12_RS03890 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD12_RS03890 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD12_RS03895 PF01258 Prokaryotic dksA/traR C4-type zinc finger RD12_RS03900 PF00227 Proteasome subunit RD12_RS03905 PF00004 ATPase family associated with various cellular activities (AAA) RD12_RS03905 PF07724 AAA domain (Cdc48 subfamily) RD12_RS03905 PF10431 C-terminal, D2-small domain, of ClpB protein RD12_RS03910 PF11604 Copper binding periplasmic protein CusF RD12_RS03915 PF01923 Cobalamin adenosyltransferase RD12_RS03920 PF00665 Integrase core domain RD12_RS03920 PF13011 RD12_RS03920 RD12_RS03925 PF02525 Flavodoxin-like fold RD12_RS03930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD12_RS03930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD12_RS03935 PF01019 Gamma-glutamyltranspeptidase RD12_RS03940 PF01970 RD12_RS03940 RD12_RS03945 PF07331 RD12_RS03945 RD12_RS03950 PF00665 Integrase core domain RD12_RS03950 PF13011 RD12_RS03950 RD12_RS03960 PF05164 Cell division protein ZapA RD12_RS03970 PF00665 Integrase core domain RD12_RS03970 PF13011 RD12_RS03970 RD12_RS03975 PF04402 Protein of unknown function (DUF541) RD12_RS03980 PF01790 RD12_RS03980 RD12_RS03985 PF00920 Dehydratase family RD12_RS03990 PF00034 Cytochrome c RD12_RS03995 PF01625 Peptide methionine sulfoxide reductase RD12_RS04000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD12_RS04000 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal RD12_RS04005 PF01037 AsnC family RD12_RS04005 PF13412 Winged helix-turn-helix DNA-binding RD12_RS04040 PF02201 SWIB/MDM2 domain RD12_RS04045 PF01546 Peptidase family M20/M25/M40 RD12_RS04045 PF07687 Peptidase dimerisation domain RD12_RS04050 PF01979 Amidohydrolase family RD12_RS04055 PF00005 ABC transporter RD12_RS04055 PF12848 ABC transporter RD12_RS04055 PF16326 RD12_RS04055 RD12_RS04065 PF02381 MraZ protein RD12_RS04070 PF01795 MraW methylase family RD12_RS04075 PF04999 RD12_RS04075 RD12_RS04080 PF00905 Penicillin binding protein transpeptidase domain RD12_RS04080 PF03717 Penicillin-binding Protein dimerisation domain RD12_RS04085 PF01225 Mur ligase family, catalytic domain RD12_RS04085 PF02875 Mur ligase family, glutamate ligase domain RD12_RS04085 PF08245 Mur ligase middle domain RD12_RS04090 PF00953 Glycosyl transferase family 4 RD12_RS04095 PF02875 Mur ligase family, glutamate ligase domain RD12_RS04095 PF08245 Mur ligase middle domain RD12_RS04100 PF01098 RD12_RS04100 RD12_RS04105 PF03033 Glycosyltransferase family 28 N-terminal domain RD12_RS04105 PF04101 Glycosyltransferase family 28 C-terminal domain RD12_RS04110 PF01225 Mur ligase family, catalytic domain RD12_RS04110 PF02875 Mur ligase family, glutamate ligase domain RD12_RS04110 PF08245 Mur ligase middle domain RD12_RS04115 PF01820 D-ala D-ala ligase N-terminus RD12_RS04115 PF07478 D-ala D-ala ligase C-terminus RD12_RS04120 PF03799 Cell division protein FtsQ RD12_RS04120 PF08478 POTRA domain, FtsQ-type RD12_RS04125 PF02491 SHS2 domain inserted in FTSA RD12_RS04125 PF14450 Cell division protein FtsA RD12_RS04130 PF00091 Tubulin/FtsZ family, GTPase domain RD12_RS04130 PF12327 FtsZ family, C-terminal domain RD12_RS04135 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RD12_RS04140 PF02120 Flagellar hook-length control protein FliK RD12_RS04145 PF01551 Peptidase family M23 RD12_RS04150 PF01043 SecA preprotein cross-linking domain RD12_RS04150 PF02810 SEC-C motif RD12_RS04150 PF07516 SecA Wing and Scaffold domain RD12_RS04150 PF07517 SecA DEAD-like domain RD12_RS04155 PF13468 Glyoxalase-like domain RD12_RS04160 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS04165 PF05995 Cysteine dioxygenase type I RD12_RS04170 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS04175 PF01266 FAD dependent oxidoreductase RD12_RS04180 PF01037 AsnC family RD12_RS04180 PF13412 Winged helix-turn-helix DNA-binding RD12_RS04185 PF04752 RD12_RS04185 RD12_RS04190 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP RD12_RS04195 PF00665 Integrase core domain RD12_RS04195 PF13011 RD12_RS04195 RD12_RS04200 PF01488 Shikimate / quinate 5-dehydrogenase RD12_RS04200 PF08501 Shikimate dehydrogenase substrate binding domain RD12_RS04205 PF03544 Gram-negative bacterial TonB protein C-terminal RD12_RS04210 PF00773 RNB domain RD12_RS04215 PF05728 Uncharacterised protein family (UPF0227) RD12_RS04220 PF01225 Mur ligase family, catalytic domain RD12_RS04220 PF02875 Mur ligase family, glutamate ligase domain RD12_RS04220 PF08245 Mur ligase middle domain RD12_RS04225 PF00578 AhpC/TSA family RD12_RS04230 PF01220 Dehydroquinase class II RD12_RS04235 PF00364 Biotin-requiring enzyme RD12_RS04240 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RD12_RS04240 PF02785 Biotin carboxylase C-terminal domain RD12_RS04240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD12_RS04245 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RD12_RS04250 PF11906 RD12_RS04250 RD12_RS04250 PF13719 RD12_RS04250 RD12_RS04255 PF00294 pfkB family carbohydrate kinase RD12_RS04260 PF05433 RD12_RS04260 RD12_RS04265 PF00550 Phosphopantetheine attachment site RD12_RS04270 PF04914 DltD C-terminal region RD12_RS04280 PF03062 RD12_RS04280 RD12_RS04285 PF00501 AMP-binding enzyme RD12_RS04290 PF02325 RD12_RS04290 RD12_RS04295 PF07382 RD12_RS04295 RD12_RS04300 PF00268 Ribonucleotide reductase, small chain RD12_RS04305 PF00317 Ribonucleotide reductase, all-alpha domain RD12_RS04305 PF02867 Ribonucleotide reductase, barrel domain RD12_RS04305 PF03477 ATP cone domain RD12_RS04310 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RD12_RS04310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS04320 PF01037 AsnC family RD12_RS04320 PF13404 AsnC-type helix-turn-helix domain RD12_RS04330 PF07690 Major Facilitator Superfamily RD12_RS04335 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD12_RS04340 PF00583 Acetyltransferase (GNAT) family RD12_RS04340 PF13549 ATP-grasp domain RD12_RS04340 PF13607 Succinyl-CoA ligase like flavodoxin domain RD12_RS04345 PF00665 Integrase core domain RD12_RS04345 PF13011 RD12_RS04345 RD12_RS04350 PF00392 Bacterial regulatory proteins, gntR family RD12_RS04350 PF07729 FCD domain RD12_RS04360 PF00270 DEAD/DEAH box helicase RD12_RS04360 PF00271 Helicase conserved C-terminal domain RD12_RS04360 PF03880 DbpA RNA binding domain RD12_RS04365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD12_RS04370 PF00857 Isochorismatase family RD12_RS04375 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS04380 PF00005 ABC transporter RD12_RS04390 PF02230 Phospholipase/Carboxylesterase RD12_RS04395 PF04751 Protein of unknown function (DUF615) RD12_RS04400 PF01523 Putative modulator of DNA gyrase RD12_RS04405 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS04410 PF00572 Ribosomal protein L13 RD12_RS04415 PF00380 Ribosomal protein S9/S16 RD12_RS04420 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD12_RS04420 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD12_RS04430 PF01521 Iron-sulphur cluster biosynthesis RD12_RS04435 PF03702 Uncharacterised protein family (UPF0075) RD12_RS04440 PF01551 Peptidase family M23 RD12_RS04445 PF00665 Integrase core domain RD12_RS04445 PF13011 RD12_RS04445 RD12_RS04450 PF00665 Integrase core domain RD12_RS04450 PF13011 RD12_RS04450 RD12_RS04455 PF00579 tRNA synthetases class I (W and Y) RD12_RS04455 PF01479 S4 domain RD12_RS04460 PF01161 Phosphatidylethanolamine-binding protein RD12_RS04465 PF00464 Serine hydroxymethyltransferase RD12_RS04470 PF03477 ATP cone domain RD12_RS04475 PF01965 DJ-1/PfpI family RD12_RS04480 PF00857 Isochorismatase family RD12_RS04485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD12_RS04485 PF01872 RibD C-terminal domain RD12_RS04490 PF00665 Integrase core domain RD12_RS04490 PF13011 RD12_RS04490 RD12_RS04500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS04505 PF13452 N-terminal half of MaoC dehydratase RD12_RS04510 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS04515 PF03466 LysR substrate binding domain RD12_RS04520 PF02515 CoA-transferase family III RD12_RS04525 PF07690 Major Facilitator Superfamily RD12_RS04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS04530 PF03466 LysR substrate binding domain RD12_RS04540 PF02678 Pirin RD12_RS04540 PF05726 Pirin C-terminal cupin domain RD12_RS04545 PF13847 Methyltransferase domain RD12_RS04550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS04555 PF00072 Response regulator receiver domain RD12_RS04555 PF02954 Bacterial regulatory protein, Fis family RD12_RS04560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD12_RS04560 PF06481 COX Aromatic Rich Motif RD12_RS04565 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD12_RS04570 PF00510 Cytochrome c oxidase subunit III RD12_RS04575 PF03626 RD12_RS04575 RD12_RS04580 PF12840 Helix-turn-helix domain RD12_RS04590 PF07681 RD12_RS04590 RD12_RS04595 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) RD12_RS04600 PF05114 Protein of unknown function (DUF692) RD12_RS04605 PF10048 RD12_RS04605 RD12_RS04610 PF11162 RD12_RS04610 RD12_RS04615 PF00593 TonB dependent receptor RD12_RS04615 PF07715 TonB-dependent Receptor Plug Domain RD12_RS04620 PF03929 RD12_RS04620 RD12_RS04625 PF02417 RD12_RS04625 RD12_RS04630 PF01476 LysM domain RD12_RS04630 PF01551 Peptidase family M23 RD12_RS04640 PF05425 RD12_RS04640 RD12_RS04645 PF04461 Protein of unknown function (DUF520) RD12_RS04650 PF03640 RD12_RS04650 RD12_RS04655 PF04542 Sigma-70 region 2 RD12_RS04655 PF08281 Sigma-70, region 4 RD12_RS04665 PF00665 Integrase core domain RD12_RS04665 PF13011 RD12_RS04665 RD12_RS04670 PF00816 H-NS histone family RD12_RS04675 PF00795 Carbon-nitrogen hydrolase RD12_RS04680 PF01523 Putative modulator of DNA gyrase RD12_RS04685 PF00793 DAHP synthetase I family RD12_RS04690 PF05860 haemagglutination activity domain RD12_RS04690 PF11713 Peptidase C80 family RD12_RS04690 PF13332 RD12_RS04690 RD12_RS04695 PF01565 FAD binding domain RD12_RS04695 PF02913 FAD linked oxidases, C-terminal domain RD12_RS04700 PF01565 FAD binding domain RD12_RS04700 PF02913 FAD linked oxidases, C-terminal domain RD12_RS04705 PF01565 FAD binding domain RD12_RS04710 PF02754 RD12_RS04710 RD12_RS04710 PF13183 4Fe-4S dicluster domain RD12_RS04715 PF00756 Putative esterase RD12_RS04720 PF00593 TonB dependent receptor RD12_RS04720 PF07715 TonB-dependent Receptor Plug Domain RD12_RS04725 PF12833 Helix-turn-helix domain RD12_RS04730 PF02233 NAD(P) transhydrogenase beta subunit RD12_RS04735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RD12_RS04735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD12_RS04740 PF05013 N-formylglutamate amidohydrolase RD12_RS04745 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS04750 PF03466 LysR substrate binding domain RD12_RS04755 PF03054 tRNA methyl transferase RD12_RS04760 PF01925 RD12_RS04760 RD12_RS04765 PF13410 Glutathione S-transferase, C-terminal domain RD12_RS04765 PF13417 Glutathione S-transferase, N-terminal domain RD12_RS04770 PF00206 Lyase RD12_RS04770 PF08328 Adenylosuccinate lyase C-terminal RD12_RS04775 PF01322 Cytochrome C' RD12_RS04780 PF01292 Prokaryotic cytochrome b561 RD12_RS04790 PF11254 RD12_RS04790 RD12_RS04795 PF01594 RD12_RS04795 RD12_RS04800 PF00665 Integrase core domain RD12_RS04800 PF13011 RD12_RS04800 RD12_RS04805 PF00392 Bacterial regulatory proteins, gntR family RD12_RS04805 PF07729 FCD domain RD12_RS04815 PF01425 Amidase RD12_RS04820 PF02515 CoA-transferase family III RD12_RS04825 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS04835 PF09084 NMT1/THI5 like RD12_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS04845 PF00005 ABC transporter RD12_RS04850 PF01522 Polysaccharide deacetylase RD12_RS04855 PF00106 short chain dehydrogenase RD12_RS04860 PF01614 Bacterial transcriptional regulator RD12_RS04860 PF09339 IclR helix-turn-helix domain RD12_RS04870 PF00501 AMP-binding enzyme RD12_RS04870 PF13193 AMP-binding enzyme C-terminal domain RD12_RS04875 PF01042 Endoribonuclease L-PSP RD12_RS04880 PF02653 RD12_RS04880 RD12_RS04885 PF02653 RD12_RS04885 RD12_RS04895 PF00005 ABC transporter RD12_RS04900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD12_RS04905 PF00665 Integrase core domain RD12_RS04905 PF13011 RD12_RS04905 RD12_RS04910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD12_RS04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS04915 PF03466 LysR substrate binding domain RD12_RS04920 PF12796 Ankyrin repeats (3 copies) RD12_RS04925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD12_RS04930 PF07690 Major Facilitator Superfamily RD12_RS04935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS04935 PF03466 LysR substrate binding domain RD12_RS04945 PF00665 Integrase core domain RD12_RS04945 PF13011 RD12_RS04945 RD12_RS04950 PF01425 Amidase RD12_RS04955 PF00677 Lumazine binding domain RD12_RS04960 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS04965 PF01037 AsnC family RD12_RS04965 PF13412 Winged helix-turn-helix DNA-binding RD12_RS04970 PF05995 Cysteine dioxygenase type I RD12_RS04975 PF00501 AMP-binding enzyme RD12_RS04975 PF13193 AMP-binding enzyme C-terminal domain RD12_RS04980 PF10994 Protein of unknown function (DUF2817) RD12_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS04990 PF00005 ABC transporter RD12_RS05000 PF03061 Thioesterase superfamily RD12_RS05005 PF00107 Zinc-binding dehydrogenase RD12_RS05005 PF08240 Alcohol dehydrogenase GroES-like domain RD12_RS05010 PF13468 Glyoxalase-like domain RD12_RS05015 PF05899 Protein of unknown function (DUF861) RD12_RS05020 PF00665 Integrase core domain RD12_RS05020 PF13011 RD12_RS05020 RD12_RS05025 PF00665 Integrase core domain RD12_RS05025 PF13011 RD12_RS05025 RD12_RS05030 PF00122 E1-E2 ATPase RD12_RS05030 PF00403 Heavy-metal-associated domain RD12_RS05030 PF00702 haloacid dehalogenase-like hydrolase RD12_RS05035 PF01966 HD domain RD12_RS05040 PF00155 Aminotransferase class I and II RD12_RS05045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS05045 PF03466 LysR substrate binding domain RD12_RS05050 PF12697 Alpha/beta hydrolase family RD12_RS05055 PF07690 Major Facilitator Superfamily RD12_RS05060 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS05065 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS05070 PF00665 Integrase core domain RD12_RS05070 PF13011 RD12_RS05070 RD12_RS05075 PF13609 Gram-negative porin RD12_RS05080 PF02548 Ketopantoate hydroxymethyltransferase RD12_RS05085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS05085 PF03466 LysR substrate binding domain RD12_RS05090 PF00665 Integrase core domain RD12_RS05090 PF13011 RD12_RS05090 RD12_RS05105 PF00665 Integrase core domain RD12_RS05105 PF13011 RD12_RS05105 RD12_RS05125 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS05130 PF00440 Bacterial regulatory proteins, tetR family RD12_RS05135 PF00665 Integrase core domain RD12_RS05135 PF13011 RD12_RS05135 RD12_RS05140 PF05170 RD12_RS05140 RD12_RS05145 PF03352 Methyladenine glycosylase RD12_RS05150 PF00376 MerR family regulatory protein RD12_RS05150 PF09278 MerR, DNA binding RD12_RS05165 PF13416 Bacterial extracellular solute-binding protein RD12_RS05170 PF00665 Integrase core domain RD12_RS05170 PF13011 RD12_RS05170 RD12_RS05175 PF12831 FAD dependent oxidoreductase RD12_RS05180 PF00005 ABC transporter RD12_RS05185 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS05195 PF03972 MmgE/PrpD family RD12_RS05200 PF03972 MmgE/PrpD family RD12_RS05210 PF00665 Integrase core domain RD12_RS05210 PF13011 RD12_RS05210 RD12_RS05215 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS05220 PF00392 Bacterial regulatory proteins, gntR family RD12_RS05220 PF07729 FCD domain RD12_RS05225 PF04412 RD12_RS05225 RD12_RS05230 PF01989 Protein of unknown function DUF126 RD12_RS05235 PF03992 Antibiotic biosynthesis monooxygenase RD12_RS05240 PF00665 Integrase core domain RD12_RS05240 PF13011 RD12_RS05240 RD12_RS05245 PF00465 Iron-containing alcohol dehydrogenase RD12_RS05250 PF00665 Integrase core domain RD12_RS05250 PF13011 RD12_RS05250 RD12_RS05260 PF03180 NLPA lipoprotein RD12_RS05265 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS05270 PF00005 ABC transporter RD12_RS05270 PF09383 NIL domain RD12_RS05275 PF01055 Glycosyl hydrolases family 31 RD12_RS05285 PF00459 Inositol monophosphatase family RD12_RS05290 PF00665 Integrase core domain RD12_RS05290 PF13011 RD12_RS05290 RD12_RS05295 PF00501 AMP-binding enzyme RD12_RS05295 PF13193 AMP-binding enzyme C-terminal domain RD12_RS05300 PF01546 Peptidase family M20/M25/M40 RD12_RS05300 PF07687 Peptidase dimerisation domain RD12_RS05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS05305 PF03466 LysR substrate binding domain RD12_RS05310 PF03601 RD12_RS05310 RD12_RS05315 PF03061 Thioesterase superfamily RD12_RS05320 PF00571 CBS domain RD12_RS05320 PF01769 Divalent cation transporter RD12_RS05320 PF03448 MgtE intracellular N domain RD12_RS05325 PF00665 Integrase core domain RD12_RS05325 PF13011 RD12_RS05325 RD12_RS05330 PF00355 Rieske [2Fe-2S] domain RD12_RS05330 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD12_RS05335 PF01757 RD12_RS05335 RD12_RS05340 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS05345 PF01614 Bacterial transcriptional regulator RD12_RS05345 PF09339 IclR helix-turn-helix domain RD12_RS05350 PF02609 Exonuclease VII small subunit RD12_RS05355 PF00348 Polyprenyl synthetase RD12_RS05360 PF02779 Transketolase, pyrimidine binding domain RD12_RS05360 PF02780 Transketolase, C-terminal domain RD12_RS05360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RD12_RS05365 PF02649 Type I GTP cyclohydrolase folE2 RD12_RS05370 PF01250 Ribosomal protein S6 RD12_RS05380 PF01084 Ribosomal protein S18 RD12_RS05385 PF01281 Ribosomal protein L9, N-terminal domain RD12_RS05385 PF03948 Ribosomal protein L9, C-terminal domain RD12_RS05395 PF00772 DnaB-like helicase N terminal domain RD12_RS05395 PF03796 DnaB-like helicase C terminal domain RD12_RS05400 PF13593 SBF-like CPA transporter family (DUF4137) RD12_RS05405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD12_RS05410 PF02562 PhoH-like protein RD12_RS05410 PF13638 PIN domain RD12_RS05415 PF00578 AhpC/TSA family RD12_RS05420 PF04430 Protein of unknown function (DUF498/DUF598) RD12_RS05425 PF00155 Aminotransferase class I and II RD12_RS05430 PF00742 Homoserine dehydrogenase RD12_RS05430 PF01842 ACT domain RD12_RS05430 PF03447 Homoserine dehydrogenase, NAD binding domain RD12_RS05435 PF00291 Pyridoxal-phosphate dependent enzyme RD12_RS05435 PF14821 Threonine synthase N terminus RD12_RS05440 PF06004 Bacterial protein of unknown function (DUF903) RD12_RS05445 PF00665 Integrase core domain RD12_RS05445 PF13011 RD12_RS05445 RD12_RS05450 PF02615 Malate/L-lactate dehydrogenase RD12_RS05460 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS05465 PF00665 Integrase core domain RD12_RS05465 PF13011 RD12_RS05465 RD12_RS05475 PF03328 HpcH/HpaI aldolase/citrate lyase family RD12_RS05480 PF01649 Ribosomal protein S20 RD12_RS05485 PF04773 FecR protein RD12_RS05485 PF16220 RD12_RS05485 RD12_RS05490 PF03023 RD12_RS05490 RD12_RS05495 PF00106 short chain dehydrogenase RD12_RS05500 PF00406 Adenylate kinase RD12_RS05500 PF05191 Adenylate kinase, active site lid RD12_RS05505 PF02348 Cytidylyltransferase RD12_RS05510 PF03966 Trm112p-like protein RD12_RS05515 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RD12_RS05520 PF02472 Biopolymer transport protein ExbD/TolR RD12_RS05525 PF01618 RD12_RS05525 RD12_RS05530 PF00665 Integrase core domain RD12_RS05530 PF13011 RD12_RS05530 RD12_RS05535 PF02601 RD12_RS05535 RD12_RS05535 PF13742 RD12_RS05535 RD12_RS05540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD12_RS05540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD12_RS05545 PF00654 Voltage gated chloride channel RD12_RS05550 PF00108 Thiolase, N-terminal domain RD12_RS05550 PF02803 Thiolase, C-terminal domain RD12_RS05555 PF02643 Uncharacterized ACR, COG1430 RD12_RS05560 PF00313 'Cold-shock' DNA-binding domain RD12_RS05565 PF02617 ATP-dependent Clp protease adaptor protein ClpS RD12_RS05570 PF00207 Alpha-2-macroglobulin family RD12_RS05570 PF01835 MG2 domain RD12_RS05570 PF07678 A-macroglobulin complement component RD12_RS05570 PF07703 Alpha-2-macroglobulin family N-terminal region RD12_RS05570 PF10569 Alpha-macro-globulin thiol-ester bond-forming region RD12_RS05570 PF11974 Alpha-2-macroglobulin MG1 domain RD12_RS05575 PF00905 Penicillin binding protein transpeptidase domain RD12_RS05575 PF00912 Transglycosylase RD12_RS05575 PF06832 RD12_RS05575 RD12_RS05580 PF00004 ATPase family associated with various cellular activities (AAA) RD12_RS05580 PF02861 Clp amino terminal domain RD12_RS05580 PF07724 AAA domain (Cdc48 subfamily) RD12_RS05580 PF10431 C-terminal, D2-small domain, of ClpB protein RD12_RS05585 PF04403 RD12_RS05585 RD12_RS05590 PF02470 RD12_RS05590 RD12_RS05595 PF03886 Protein of unknown function (DUF330) RD12_RS05600 PF00171 Aldehyde dehydrogenase family RD12_RS05600 PF01619 Proline dehydrogenase RD12_RS05600 PF14850 DNA-binding domain of Proline dehydrogenase RD12_RS05605 PF00665 Integrase core domain RD12_RS05605 PF13011 RD12_RS05605 RD12_RS05610 PF13458 Periplasmic binding protein RD12_RS05615 PF02653 RD12_RS05615 RD12_RS05620 PF02653 RD12_RS05620 RD12_RS05625 PF00005 ABC transporter RD12_RS05625 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS05630 PF00005 ABC transporter RD12_RS05635 PF07690 Major Facilitator Superfamily RD12_RS05640 PF00440 Bacterial regulatory proteins, tetR family RD12_RS05650 PF03212 Pertactin RD12_RS05650 PF03797 Autotransporter beta-domain RD12_RS05660 PF00543 Nitrogen regulatory protein P-II RD12_RS05665 PF04380 RD12_RS05665 RD12_RS05675 PF00665 Integrase core domain RD12_RS05675 PF13011 RD12_RS05675 RD12_RS05680 PF00083 Sugar (and other) transporter RD12_RS05690 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD12_RS05695 PF00510 Cytochrome c oxidase subunit III RD12_RS05700 PF03626 RD12_RS05700 RD12_RS05705 PF02104 RD12_RS05705 RD12_RS05710 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS05715 PF05013 N-formylglutamate amidohydrolase RD12_RS05720 PF00665 Integrase core domain RD12_RS05720 PF13011 RD12_RS05720 RD12_RS05725 PF00665 Integrase core domain RD12_RS05725 PF13011 RD12_RS05725 RD12_RS05730 PF13411 MerR HTH family regulatory protein RD12_RS05735 PF00122 E1-E2 ATPase RD12_RS05735 PF00702 haloacid dehalogenase-like hydrolase RD12_RS05740 PF01548 RD12_RS05740 RD12_RS05740 PF02371 RD12_RS05740 RD12_RS05745 PF00440 Bacterial regulatory proteins, tetR family RD12_RS05745 PF16925 RD12_RS05745 RD12_RS05750 PF13663 RD12_RS05750 RD12_RS05755 PF04055 Radical SAM superfamily RD12_RS05755 PF06968 Biotin and Thiamin Synthesis associated domain RD12_RS05765 PF07690 Major Facilitator Superfamily RD12_RS05770 PF08534 Redoxin RD12_RS05780 PF01738 Dienelactone hydrolase family RD12_RS05785 PF05359 RD12_RS05785 RD12_RS05790 PF01967 MoaC family RD12_RS05795 PF02597 ThiS family RD12_RS05800 PF02391 MoaE protein RD12_RS05805 PF00994 Probable molybdopterin binding domain RD12_RS05810 PF00994 Probable molybdopterin binding domain RD12_RS05810 PF03453 MoeA N-terminal region (domain I and II) RD12_RS05810 PF03454 MoeA C-terminal region (domain IV) RD12_RS05815 PF04055 Radical SAM superfamily RD12_RS05815 PF06463 Molybdenum Cofactor Synthesis C RD12_RS05815 PF13394 4Fe-4S single cluster domain RD12_RS05820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS05820 PF12727 PBP superfamily domain RD12_RS05825 PF00665 Integrase core domain RD12_RS05825 PF13011 RD12_RS05825 RD12_RS05830 PF00881 Nitroreductase family RD12_RS05835 PF00206 Lyase RD12_RS05835 PF14698 Argininosuccinate lyase C-terminal RD12_RS05840 PF00924 Mechanosensitive ion channel RD12_RS05845 PF00795 Carbon-nitrogen hydrolase RD12_RS05845 PF02540 NAD synthase RD12_RS05850 PF00543 Nitrogen regulatory protein P-II RD12_RS05855 PF03013 Pyrimidine dimer DNA glycosylase RD12_RS05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS05875 PF03466 LysR substrate binding domain RD12_RS05880 PF01019 Gamma-glutamyltranspeptidase RD12_RS05885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS05895 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS05895 PF12911 RD12_RS05895 RD12_RS05900 PF03193 Protein of unknown function, DUF258 RD12_RS05905 PF01435 Peptidase family M48 RD12_RS05905 PF16491 RD12_RS05905 RD12_RS05910 PF00929 Exonuclease RD12_RS05915 PF03853 YjeF-related protein N-terminus RD12_RS05920 PF07848 PaaX-like protein RD12_RS05920 PF08223 PaaX-like protein C-terminal domain RD12_RS05925 PF05138 Phenylacetic acid catabolic protein RD12_RS05930 PF06243 Phenylacetic acid degradation B RD12_RS05935 PF05138 Phenylacetic acid catabolic protein RD12_RS05940 PF01883 Domain of unknown function DUF59 RD12_RS05945 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS05945 PF00175 Oxidoreductase NAD-binding domain RD12_RS05945 PF00970 Oxidoreductase FAD-binding domain RD12_RS05950 PF00665 Integrase core domain RD12_RS05950 PF13011 RD12_RS05950 RD12_RS05955 PF00171 Aldehyde dehydrogenase family RD12_RS05960 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS05965 PF03061 Thioesterase superfamily RD12_RS05970 PF00501 AMP-binding enzyme RD12_RS05970 PF14535 AMP-binding enzyme C-terminal domain RD12_RS05975 PF16970 RD12_RS05975 RD12_RS05980 PF00665 Integrase core domain RD12_RS05980 PF13011 RD12_RS05980 RD12_RS05985 PF00665 Integrase core domain RD12_RS05985 PF13011 RD12_RS05985 RD12_RS05990 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS05995 PF06808 RD12_RS05995 RD12_RS06000 PF04290 RD12_RS06000 RD12_RS06005 PF02769 AIR synthase related protein, C-terminal domain RD12_RS06005 PF13507 CobB/CobQ-like glutamine amidotransferase domain RD12_RS06010 PF05860 haemagglutination activity domain RD12_RS06010 PF13332 RD12_RS06010 RD12_RS06015 PF00665 Integrase core domain RD12_RS06015 PF13011 RD12_RS06015 RD12_RS06020 PF04632 RD12_RS06020 RD12_RS06025 PF12802 MarR family RD12_RS06030 PF01381 Helix-turn-helix RD12_RS06030 PF07883 Cupin domain RD12_RS06035 PF00596 Class II Aldolase and Adducin N-terminal domain RD12_RS06040 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS06045 PF01242 6-pyruvoyl tetrahydropterin synthase RD12_RS06055 PF00472 RF-1 domain RD12_RS06060 PF09997 RD12_RS06060 RD12_RS06065 PF01124 MAPEG family RD12_RS06070 PF01614 Bacterial transcriptional regulator RD12_RS06075 PF00701 Dihydrodipicolinate synthetase family RD12_RS06080 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS06090 PF05742 RD12_RS06090 RD12_RS06095 PF01965 DJ-1/PfpI family RD12_RS06100 PF04909 Amidohydrolase RD12_RS06105 PF00890 FAD binding domain RD12_RS06110 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS06115 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS06120 PF01614 Bacterial transcriptional regulator RD12_RS06120 PF09339 IclR helix-turn-helix domain RD12_RS06125 PF01266 FAD dependent oxidoreductase RD12_RS06125 PF16901 RD12_RS06125 RD12_RS06130 PF00455 RD12_RS06130 RD12_RS06130 PF08220 DeoR-like helix-turn-helix domain RD12_RS06135 PF00005 ABC transporter RD12_RS06135 PF08402 TOBE domain RD12_RS06140 PF00005 ABC transporter RD12_RS06150 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS06155 PF09928 RD12_RS06155 RD12_RS06160 PF13416 Bacterial extracellular solute-binding protein RD12_RS06170 PF04367 RD12_RS06170 RD12_RS06175 PF01037 AsnC family RD12_RS06175 PF13412 Winged helix-turn-helix DNA-binding RD12_RS06180 PF01266 FAD dependent oxidoreductase RD12_RS06185 PF00149 Calcineurin-like phosphoesterase RD12_RS06190 PF13476 AAA domain RD12_RS06195 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS06200 PF00665 Integrase core domain RD12_RS06200 PF13011 RD12_RS06200 RD12_RS06210 PF00196 Bacterial regulatory proteins, luxR family RD12_RS06210 PF08448 PAS fold RD12_RS06220 PF03797 Autotransporter beta-domain RD12_RS06225 PF09998 RD12_RS06225 RD12_RS06230 PF00478 IMP dehydrogenase / GMP reductase domain RD12_RS06230 PF00571 CBS domain RD12_RS06235 PF00117 Glutamine amidotransferase class-I RD12_RS06235 PF00958 GMP synthase C terminal domain RD12_RS06235 PF02540 NAD synthase RD12_RS06240 PF01381 Helix-turn-helix RD12_RS06245 PF07804 HipA-like C-terminal domain RD12_RS06245 PF07805 HipA-like N-terminal domain RD12_RS06245 PF13657 HipA N-terminal domain RD12_RS06250 PF00440 Bacterial regulatory proteins, tetR family RD12_RS06255 PF07690 Major Facilitator Superfamily RD12_RS06265 PF01614 Bacterial transcriptional regulator RD12_RS06265 PF09339 IclR helix-turn-helix domain RD12_RS06270 PF07969 Amidohydrolase family RD12_RS06275 PF09084 NMT1/THI5 like RD12_RS06280 PF00005 ABC transporter RD12_RS06285 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS06290 PF04412 RD12_RS06290 RD12_RS06295 PF01989 Protein of unknown function DUF126 RD12_RS06305 PF00665 Integrase core domain RD12_RS06305 PF13011 RD12_RS06305 RD12_RS06310 PF01965 DJ-1/PfpI family RD12_RS06315 PF00916 RD12_RS06315 RD12_RS06315 PF01740 STAS domain RD12_RS06320 PF00753 Metallo-beta-lactamase superfamily RD12_RS06320 PF07521 RNA-metabolising metallo-beta-lactamase RD12_RS06320 PF10996 Beta-Casp domain RD12_RS06325 PF00665 Integrase core domain RD12_RS06325 PF13011 RD12_RS06325 RD12_RS06330 PF13515 RD12_RS06330 RD12_RS06335 PF12706 Beta-lactamase superfamily domain RD12_RS06340 PF01965 DJ-1/PfpI family RD12_RS06340 PF12833 Helix-turn-helix domain RD12_RS06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS06345 PF03466 LysR substrate binding domain RD12_RS06350 PF12973 ChrR Cupin-like domain RD12_RS06355 PF01593 Flavin containing amine oxidoreductase RD12_RS06355 PF13450 NAD(P)-binding Rossmann-like domain RD12_RS06360 PF00107 Zinc-binding dehydrogenase RD12_RS06360 PF08240 Alcohol dehydrogenase GroES-like domain RD12_RS06365 PF07690 Major Facilitator Superfamily RD12_RS06370 PF00155 Aminotransferase class I and II RD12_RS06370 PF00392 Bacterial regulatory proteins, gntR family RD12_RS06375 PF04299 Putative FMN-binding domain RD12_RS06380 PF01810 RD12_RS06380 RD12_RS06385 PF08818 Domain of unknown function (DU1801) RD12_RS06390 PF01546 Peptidase family M20/M25/M40 RD12_RS06390 PF07687 Peptidase dimerisation domain RD12_RS06395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS06410 PF00005 ABC transporter RD12_RS06410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS06415 PF00356 Bacterial regulatory proteins, lacI family RD12_RS06415 PF13377 Periplasmic binding protein-like domain RD12_RS06425 PF09278 MerR, DNA binding RD12_RS06430 PF00665 Integrase core domain RD12_RS06430 PF13011 RD12_RS06430 RD12_RS06435 PF04307 RD12_RS06435 RD12_RS06440 PF09335 RD12_RS06440 RD12_RS06445 PF00583 Acetyltransferase (GNAT) family RD12_RS06450 PF13649 Methyltransferase domain RD12_RS06455 PF00665 Integrase core domain RD12_RS06455 PF13011 RD12_RS06455 RD12_RS06460 PF02592 RD12_RS06460 RD12_RS06465 PF03807 NADP oxidoreductase coenzyme F420-dependent RD12_RS06465 PF14748 Pyrroline-5-carboxylate reductase dimerisation RD12_RS06470 PF13416 Bacterial extracellular solute-binding protein RD12_RS06475 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS06485 PF00005 ABC transporter RD12_RS06485 PF08402 TOBE domain RD12_RS06490 PF13458 Periplasmic binding protein RD12_RS06495 PF06821 Serine hydrolase RD12_RS06500 PF00665 Integrase core domain RD12_RS06500 PF13011 RD12_RS06500 RD12_RS06510 PF04241 RD12_RS06510 RD12_RS06515 PF09722 RD12_RS06515 RD12_RS06520 PF08808 RD12_RS06520 RD12_RS06525 PF03180 NLPA lipoprotein RD12_RS06530 PF01070 FMN-dependent dehydrogenase RD12_RS06535 PF02666 RD12_RS06535 RD12_RS06545 PF11738 Protein of unknown function (DUF3298) RD12_RS06550 PF03099 Biotin/lipoate A/B protein ligase family RD12_RS06560 PF00583 Acetyltransferase (GNAT) family RD12_RS06565 PF00043 Glutathione S-transferase, C-terminal domain RD12_RS06565 PF02798 Glutathione S-transferase, N-terminal domain RD12_RS06570 PF00255 Glutathione peroxidase RD12_RS06575 PF07394 RD12_RS06575 RD12_RS06580 PF08811 RD12_RS06580 RD12_RS06585 PF13428 Tetratricopeptide repeat RD12_RS06590 PF02515 CoA-transferase family III RD12_RS06595 PF03960 ArsC family RD12_RS06600 PF00578 AhpC/TSA family RD12_RS06605 PF00665 Integrase core domain RD12_RS06605 PF13011 RD12_RS06605 RD12_RS06615 PF12779 RD12_RS06615 RD12_RS06620 PF07681 RD12_RS06620 RD12_RS06625 PF01447 Thermolysin metallopeptidase, catalytic domain RD12_RS06625 PF02868 Thermolysin metallopeptidase, alpha-helical domain RD12_RS06635 PF00248 Aldo/keto reductase family RD12_RS06640 PF00582 Universal stress protein family RD12_RS06655 PF00155 Aminotransferase class I and II RD12_RS06655 PF00392 Bacterial regulatory proteins, gntR family RD12_RS06660 PF01168 Alanine racemase, N-terminal domain RD12_RS06665 PF08543 Phosphomethylpyrimidine kinase RD12_RS06675 PF00128 Alpha amylase, catalytic domain RD12_RS06680 PF02446 4-alpha-glucanotransferase RD12_RS06690 PF00128 Alpha amylase, catalytic domain RD12_RS06690 PF11941 Domain of unknown function (DUF3459) RD12_RS06695 PF00128 Alpha amylase, catalytic domain RD12_RS06695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD12_RS06700 PF00128 Alpha amylase, catalytic domain RD12_RS06700 PF02806 Alpha amylase, C-terminal all-beta domain RD12_RS06700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD12_RS06705 PF00128 Alpha amylase, catalytic domain RD12_RS06705 PF16657 RD12_RS06705 RD12_RS06710 PF00128 Alpha amylase, catalytic domain RD12_RS06715 PF11896 Domain of unknown function (DUF3416) RD12_RS06720 PF00665 Integrase core domain RD12_RS06720 PF13011 RD12_RS06720 RD12_RS06730 PF00326 Prolyl oligopeptidase family RD12_RS06735 PF11379 RD12_RS06735 RD12_RS06740 PF03706 RD12_RS06740 RD12_RS06745 PF00665 Integrase core domain RD12_RS06745 PF13011 RD12_RS06745 RD12_RS06755 PF13091 PLD-like domain RD12_RS06760 PF03372 Endonuclease/Exonuclease/phosphatase family RD12_RS06765 PF03551 Transcriptional regulator PadR-like family RD12_RS06775 PF03797 Autotransporter beta-domain RD12_RS06780 PF13087 AAA domain RD12_RS06780 PF13482 RNase_H superfamily RD12_RS06780 PF13604 AAA domain RD12_RS06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS06785 PF03466 LysR substrate binding domain RD12_RS06790 PF03358 NADPH-dependent FMN reductase RD12_RS06795 PF03328 HpcH/HpaI aldolase/citrate lyase family RD12_RS06800 PF00392 Bacterial regulatory proteins, gntR family RD12_RS06800 PF07729 FCD domain RD12_RS06805 PF13380 CoA binding domain RD12_RS06805 PF13549 ATP-grasp domain RD12_RS06805 PF13607 Succinyl-CoA ligase like flavodoxin domain RD12_RS06810 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS06815 PF00285 Citrate synthase RD12_RS06820 PF02515 CoA-transferase family III RD12_RS06825 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS06830 PF00356 Bacterial regulatory proteins, lacI family RD12_RS06830 PF13377 Periplasmic binding protein-like domain RD12_RS06835 PF00694 Aconitase C-terminal domain RD12_RS06845 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS06850 PF13378 Enolase C-terminal domain-like RD12_RS06855 PF02558 Ketopantoate reductase PanE/ApbA RD12_RS06855 PF08546 Ketopantoate reductase PanE/ApbA C terminal RD12_RS06860 PF00665 Integrase core domain RD12_RS06860 PF13011 RD12_RS06860 RD12_RS06865 PF00005 ABC transporter RD12_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS06875 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS06880 PF01548 RD12_RS06880 RD12_RS06880 PF02371 RD12_RS06880 RD12_RS06885 PF01312 FlhB HrpN YscU SpaS Family RD12_RS06895 PF00448 SRP54-type protein, GTPase domain RD12_RS06900 PF05130 FlgN protein RD12_RS06905 PF04316 Anti-sigma-28 factor, FlgM RD12_RS06910 PF13144 SAF-like RD12_RS06915 PF00460 Flagella basal body rod protein RD12_RS06920 PF00460 Flagella basal body rod protein RD12_RS06920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD12_RS06925 PF03963 RD12_RS06925 RD12_RS06925 PF13860 FlgD Ig-like domain RD12_RS06925 PF13861 FlgD Tudor-like domain RD12_RS06930 PF00460 Flagella basal body rod protein RD12_RS06930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD12_RS06930 PF07559 Flagellar basal body protein FlaE RD12_RS06935 PF00460 Flagella basal body rod protein RD12_RS06935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD12_RS06940 PF00460 Flagella basal body rod protein RD12_RS06940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD12_RS06945 PF02107 RD12_RS06945 RD12_RS06950 PF02119 RD12_RS06950 RD12_RS06955 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RD12_RS06955 PF10135 RD12_RS06955 RD12_RS06960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD12_RS06965 PF00669 Bacterial flagellin N-terminal helical region RD12_RS06970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD12_RS06970 PF00672 HAMP domain RD12_RS06970 PF02203 Tar ligand binding domain homologue RD12_RS06975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD12_RS06975 PF00672 HAMP domain RD12_RS06975 PF02203 Tar ligand binding domain homologue RD12_RS06980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD12_RS06980 PF00672 HAMP domain RD12_RS06980 PF08447 PAS fold RD12_RS06985 PF01548 RD12_RS06985 RD12_RS06985 PF02371 RD12_RS06985 RD12_RS06990 PF01311 RD12_RS06990 RD12_RS06995 PF01313 RD12_RS06995 RD12_RS07000 PF00813 RD12_RS07000 RD12_RS07005 PF04347 RD12_RS07005 RD12_RS07010 PF01052 Surface presentation of antigens (SPOA) RD12_RS07015 PF01052 Surface presentation of antigens (SPOA) RD12_RS07015 PF02154 Flagellar motor switch protein FliM RD12_RS07020 PF03748 RD12_RS07020 RD12_RS07030 PF00665 Integrase core domain RD12_RS07030 PF13011 RD12_RS07030 RD12_RS07035 PF02120 Flagellar hook-length control protein FliK RD12_RS07040 PF02050 Flagellar FliJ protein RD12_RS07045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD12_RS07050 PF02108 RD12_RS07050 RD12_RS07055 PF01706 FliG C-terminal domain RD12_RS07055 PF14841 FliG middle domain RD12_RS07055 PF14842 FliG N-terminal domain RD12_RS07060 PF01514 Secretory protein of YscJ/FliF family RD12_RS07060 PF08345 RD12_RS07060 RD12_RS07065 PF02049 RD12_RS07065 RD12_RS07075 PF01312 FlhB HrpN YscU SpaS Family RD12_RS07080 PF02120 Flagellar hook-length control protein FliK RD12_RS07095 PF05400 Flagellar protein FliT RD12_RS07100 PF02561 Flagellar protein FliS RD12_RS07105 PF02465 RD12_RS07105 RD12_RS07105 PF07195 RD12_RS07105 RD12_RS07105 PF07196 Flagellin hook IN motif RD12_RS07110 PF03646 FlaG protein RD12_RS07115 PF08245 Mur ligase middle domain RD12_RS07120 PF05036 Sporulation related domain RD12_RS07125 PF02674 RD12_RS07125 RD12_RS07130 PF00156 Phosphoribosyl transferase domain RD12_RS07130 PF13522 Glutamine amidotransferase domain RD12_RS07135 PF02600 Disulfide bond formation protein DsbB RD12_RS07140 PF01914 RD12_RS07140 RD12_RS07145 PF01909 Nucleotidyltransferase domain RD12_RS07145 PF01966 HD domain RD12_RS07145 PF08335 GlnD PII-uridylyltransferase RD12_RS07150 PF00557 Metallopeptidase family M24 RD12_RS07155 PF00318 Ribosomal protein S2 RD12_RS07160 PF00889 Elongation factor TS RD12_RS07165 PF00696 Amino acid kinase family RD12_RS07170 PF01765 Ribosome recycling factor RD12_RS07175 PF01255 Putative undecaprenyl diphosphate synthase RD12_RS07180 PF01148 Cytidylyltransferase family RD12_RS07185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD12_RS07185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal RD12_RS07185 PF13288 DXP reductoisomerase C-terminal domain RD12_RS07190 PF02163 Peptidase family M50 RD12_RS07195 PF01103 Surface antigen RD12_RS07195 PF07244 Surface antigen variable number repeat RD12_RS07200 PF03938 Outer membrane protein (OmpH-like) RD12_RS07205 PF00132 Bacterial transferase hexapeptide (six repeats) RD12_RS07205 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RD12_RS07205 PF14602 Hexapeptide repeat of succinyl-transferase RD12_RS07210 PF07977 FabA-like domain RD12_RS07215 PF00132 Bacterial transferase hexapeptide (six repeats) RD12_RS07215 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RD12_RS07220 PF02684 RD12_RS07220 RD12_RS07225 PF01351 Ribonuclease HII RD12_RS07230 PF00588 SpoU rRNA Methylase family RD12_RS07235 PF03618 RD12_RS07235 RD12_RS07240 PF00391 PEP-utilising enzyme, mobile domain RD12_RS07240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RD12_RS07240 PF02896 PEP-utilising enzyme, TIM barrel domain RD12_RS07245 PF00117 Glutamine amidotransferase class-I RD12_RS07255 PF00665 Integrase core domain RD12_RS07255 PF13011 RD12_RS07255 RD12_RS07260 PF01145 SPFH domain / Band 7 family RD12_RS07260 PF16200 RD12_RS07260 RD12_RS07265 PF00990 GGDEF domain RD12_RS07270 PF01668 SmpB protein RD12_RS07275 PF00665 Integrase core domain RD12_RS07275 PF13011 RD12_RS07275 RD12_RS07280 PF03364 Polyketide cyclase / dehydrase and lipid transport RD12_RS07285 PF03658 RnfH family Ubiquitin RD12_RS07290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS07290 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS07290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS07295 PF16113 RD12_RS07295 RD12_RS07300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD12_RS07300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD12_RS07305 PF03061 Thioesterase superfamily RD12_RS07310 PF01988 RD12_RS07310 RD12_RS07315 PF00665 Integrase core domain RD12_RS07315 PF13011 RD12_RS07315 RD12_RS07320 PF00665 Integrase core domain RD12_RS07320 PF13011 RD12_RS07320 RD12_RS07325 PF00923 Transaldolase RD12_RS07330 PF00117 Glutamine amidotransferase class-I RD12_RS07330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RD12_RS07335 PF02142 MGS-like domain RD12_RS07335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD12_RS07335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD12_RS07345 PF00300 Histidine phosphatase superfamily (branch 1) RD12_RS07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS07350 PF03466 LysR substrate binding domain RD12_RS07355 PF00005 ABC transporter RD12_RS07355 PF08402 TOBE domain RD12_RS07360 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS07365 PF00665 Integrase core domain RD12_RS07365 PF13011 RD12_RS07365 RD12_RS07375 PF00563 EAL domain RD12_RS07380 PF01264 Chorismate synthase RD12_RS07385 PF01435 Peptidase family M48 RD12_RS07390 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RD12_RS07395 PF00994 Probable molybdopterin binding domain RD12_RS07395 PF03453 MoeA N-terminal region (domain I and II) RD12_RS07395 PF03454 MoeA C-terminal region (domain IV) RD12_RS07400 PF12804 MobA-like NTP transferase domain RD12_RS07405 PF01883 Domain of unknown function DUF59 RD12_RS07405 PF10609 ParA/MinD ATPase like RD12_RS07410 PF11749 RD12_RS07410 RD12_RS07415 PF11748 RD12_RS07415 RD12_RS07420 PF00037 4Fe-4S binding domain RD12_RS07420 PF13187 4Fe-4S dicluster domain RD12_RS07425 PF02613 Nitrate reductase delta subunit RD12_RS07435 PF00384 Molybdopterin oxidoreductase RD12_RS07435 PF01568 Molydopterin dinucleotide binding domain RD12_RS07435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD12_RS07450 PF01292 Prokaryotic cytochrome b561 RD12_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS07460 PF12727 PBP superfamily domain RD12_RS07465 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS07470 PF00005 ABC transporter RD12_RS07475 PF12849 PBP superfamily domain RD12_RS07480 PF00330 Aconitase family (aconitate hydratase) RD12_RS07485 PF00694 Aconitase C-terminal domain RD12_RS07490 PF00180 Isocitrate/isopropylmalate dehydrogenase RD12_RS07495 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD12_RS07495 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD12_RS07505 PF01416 tRNA pseudouridine synthase RD12_RS07510 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS07515 PF04290 RD12_RS07515 RD12_RS07520 PF06808 RD12_RS07520 RD12_RS07525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RD12_RS07535 PF00665 Integrase core domain RD12_RS07535 PF13011 RD12_RS07535 RD12_RS07540 PF03883 RD12_RS07540 RD12_RS07545 PF07690 Major Facilitator Superfamily RD12_RS07550 PF12805 RD12_RS07550 RD12_RS07550 PF13515 RD12_RS07550 RD12_RS07555 PF00665 Integrase core domain RD12_RS07555 PF13011 RD12_RS07555 RD12_RS07560 PF00990 GGDEF domain RD12_RS07560 PF13185 GAF domain RD12_RS07565 PF00665 Integrase core domain RD12_RS07565 PF13011 RD12_RS07565 RD12_RS07570 PF06969 HemN C-terminal domain RD12_RS07580 PF00072 Response regulator receiver domain RD12_RS07580 PF00196 Bacterial regulatory proteins, luxR family RD12_RS07585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD12_RS07585 PF02824 TGS domain RD12_RS07585 PF03129 Anticodon binding domain RD12_RS07585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD12_RS07590 PF00707 Translation initiation factor IF-3, C-terminal domain RD12_RS07590 PF05198 Translation initiation factor IF-3, N-terminal domain RD12_RS07595 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RD12_RS07595 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RD12_RS07600 PF03610 PTS system fructose IIA component RD12_RS07605 PF00381 PTS HPr component phosphorylation site RD12_RS07610 PF00391 PEP-utilising enzyme, mobile domain RD12_RS07610 PF02896 PEP-utilising enzyme, TIM barrel domain RD12_RS07610 PF05524 PEP-utilising enzyme, N-terminal RD12_RS07620 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD12_RS07625 PF13458 Periplasmic binding protein RD12_RS07630 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS07635 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS07640 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS07645 PF00005 ABC transporter RD12_RS07650 PF00665 Integrase core domain RD12_RS07650 PF13011 RD12_RS07650 RD12_RS07655 PF04828 Glutathione-dependent formaldehyde-activating enzyme RD12_RS07660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD12_RS07660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD12_RS07665 PF09723 RD12_RS07665 RD12_RS07670 PF02293 AmiS/UreI family transporter RD12_RS07675 PF03069 Acetamidase/Formamidase family RD12_RS07680 PF00196 Bacterial regulatory proteins, luxR family RD12_RS07690 PF01116 Fructose-bisphosphate aldolase class-II RD12_RS07695 PF04828 Glutathione-dependent formaldehyde-activating enzyme RD12_RS07700 PF01259 SAICAR synthetase RD12_RS07705 PF15723 RD12_RS07705 RD12_RS07710 PF15731 RD12_RS07710 RD12_RS07715 PF02600 Disulfide bond formation protein DsbB RD12_RS07720 PF00731 AIR carboxylase RD12_RS07725 PF02222 ATP-grasp domain RD12_RS07730 PF01300 Telomere recombination RD12_RS07730 PF03481 Putative GTP-binding controlling metal-binding RD12_RS07735 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS07740 PF01614 Bacterial transcriptional regulator RD12_RS07740 PF09339 IclR helix-turn-helix domain RD12_RS07745 PF00491 Arginase family RD12_RS07750 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS07755 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS07760 PF00005 ABC transporter RD12_RS07765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS07765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS07770 PF01575 MaoC like domain RD12_RS07775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS07775 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS07775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS07780 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS07780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS07780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS07785 PF03466 LysR substrate binding domain RD12_RS07790 PF00589 Phage integrase family RD12_RS07790 PF02899 Phage integrase, N-terminal SAM-like domain RD12_RS07795 PF04073 Aminoacyl-tRNA editing domain RD12_RS07800 PF01965 DJ-1/PfpI family RD12_RS07805 PF13467 Ribbon-helix-helix domain RD12_RS07810 PF00665 Integrase core domain RD12_RS07810 PF13011 RD12_RS07810 RD12_RS07815 PF00768 D-alanyl-D-alanine carboxypeptidase RD12_RS07825 PF07690 Major Facilitator Superfamily RD12_RS07830 PF12705 PD-(D/E)XK nuclease superfamily RD12_RS07835 PF00580 UvrD/REP helicase N-terminal domain RD12_RS07835 PF12705 PD-(D/E)XK nuclease superfamily RD12_RS07835 PF13361 UvrD-like helicase C-terminal domain RD12_RS07845 PF12169 DNA polymerase III subunits gamma and tau domain III RD12_RS07845 PF13177 DNA polymerase III, delta subunit RD12_RS07850 PF02575 YbaB/EbfC DNA-binding family RD12_RS07855 PF02132 RecR protein RD12_RS07855 PF13662 Toprim domain RD12_RS07860 PF00665 Integrase core domain RD12_RS07860 PF13011 RD12_RS07860 RD12_RS07875 PF04228 RD12_RS07875 RD12_RS07880 PF01300 Telomere recombination RD12_RS07885 PF00665 Integrase core domain RD12_RS07885 PF13011 RD12_RS07885 RD12_RS07890 PF07433 RD12_RS07890 RD12_RS07895 PF09375 Imelysin RD12_RS07900 PF06537 RD12_RS07900 RD12_RS07905 PF09375 Imelysin RD12_RS07915 PF03358 NADPH-dependent FMN reductase RD12_RS07920 PF07311 Dodecin RD12_RS07925 PF00488 MutS domain V RD12_RS07925 PF01624 MutS domain I RD12_RS07925 PF05188 MutS domain II RD12_RS07925 PF05190 MutS family domain IV RD12_RS07925 PF05192 MutS domain III RD12_RS07930 PF08007 Cupin superfamily protein RD12_RS07935 PF16970 RD12_RS07935 RD12_RS07940 PF06804 NlpB/DapX lipoprotein RD12_RS07945 PF00701 Dihydrodipicolinate synthetase family RD12_RS07955 PF00665 Integrase core domain RD12_RS07955 PF13011 RD12_RS07955 RD12_RS07960 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS07965 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS07970 PF00005 ABC transporter RD12_RS07975 PF02824 TGS domain RD12_RS07975 PF04607 Region found in RelA / SpoT proteins RD12_RS07975 PF13291 ACT domain RD12_RS07975 PF13328 HD domain RD12_RS07980 PF01192 RNA polymerase Rpb6 RD12_RS07985 PF00625 Guanylate kinase RD12_RS07990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD12_RS07995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD12_RS08000 PF00106 short chain dehydrogenase RD12_RS08005 PF00877 NlpC/P60 family RD12_RS08010 PF01048 Phosphorylase superfamily RD12_RS08010 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RD12_RS08015 PF01381 Helix-turn-helix RD12_RS08030 PF03755 RD12_RS08030 RD12_RS08030 PF08340 RD12_RS08030 RD12_RS08035 PF01138 3' exoribonuclease family, domain 1 RD12_RS08035 PF03725 3' exoribonuclease family, domain 2 RD12_RS08040 PF03972 MmgE/PrpD family RD12_RS08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS08045 PF03466 LysR substrate binding domain RD12_RS08050 PF00563 EAL domain RD12_RS08050 PF00990 GGDEF domain RD12_RS08055 PF01725 Ham1 family RD12_RS08060 PF00665 Integrase core domain RD12_RS08060 PF13011 RD12_RS08060 RD12_RS08065 PF04055 Radical SAM superfamily RD12_RS08065 PF06969 HemN C-terminal domain RD12_RS08070 PF00120 Glutamine synthetase, catalytic domain RD12_RS08070 PF03951 Glutamine synthetase, beta-Grasp domain RD12_RS08075 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS08075 PF08448 PAS fold RD12_RS08080 PF00072 Response regulator receiver domain RD12_RS08080 PF00158 Sigma-54 interaction domain RD12_RS08080 PF02954 Bacterial regulatory protein, Fis family RD12_RS08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS08085 PF03466 LysR substrate binding domain RD12_RS08090 PF02678 Pirin RD12_RS08095 PF02678 Pirin RD12_RS08095 PF05726 Pirin C-terminal cupin domain RD12_RS08100 PF00665 Integrase core domain RD12_RS08100 PF13011 RD12_RS08100 RD12_RS08105 PF00005 ABC transporter RD12_RS08110 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS08115 PF13343 Bacterial extracellular solute-binding protein RD12_RS08120 PF00175 Oxidoreductase NAD-binding domain RD12_RS08120 PF00970 Oxidoreductase FAD-binding domain RD12_RS08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS08125 PF03466 LysR substrate binding domain RD12_RS08135 PF00248 Aldo/keto reductase family RD12_RS08145 PF01042 Endoribonuclease L-PSP RD12_RS08150 PF00270 DEAD/DEAH box helicase RD12_RS08150 PF00271 Helicase conserved C-terminal domain RD12_RS08150 PF17191 RD12_RS08150 RD12_RS08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS08155 PF03466 LysR substrate binding domain RD12_RS08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS08160 PF03466 LysR substrate binding domain RD12_RS08165 PF00171 Aldehyde dehydrogenase family RD12_RS08170 PF00210 Ferritin-like domain RD12_RS08190 PF01061 RD12_RS08190 RD12_RS08195 PF00005 ABC transporter RD12_RS08200 PF02706 Chain length determinant protein RD12_RS08205 PF00534 Glycosyl transferases group 1 RD12_RS08205 PF13439 Glycosyltransferase Family 4 RD12_RS08215 PF02563 Polysaccharide biosynthesis/export protein RD12_RS08215 PF10531 SLBB domain RD12_RS08220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD12_RS08220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD12_RS08220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD12_RS08225 PF01370 NAD dependent epimerase/dehydratase family RD12_RS08230 PF05159 RD12_RS08230 RD12_RS08235 PF05159 RD12_RS08235 RD12_RS08240 PF00665 Integrase core domain RD12_RS08240 PF13011 RD12_RS08240 RD12_RS08245 PF00106 short chain dehydrogenase RD12_RS08250 PF00884 Sulfatase RD12_RS08255 PF00665 Integrase core domain RD12_RS08255 PF13011 RD12_RS08255 RD12_RS08260 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS08260 PF14759 Reductase C-terminal RD12_RS08265 PF00440 Bacterial regulatory proteins, tetR family RD12_RS08270 PF00005 ABC transporter RD12_RS08275 PF00005 ABC transporter RD12_RS08275 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS08285 PF00665 Integrase core domain RD12_RS08285 PF13011 RD12_RS08285 RD12_RS08290 PF03741 RD12_RS08290 RD12_RS08295 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS08300 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS08305 PF13557 RD12_RS08305 RD12_RS08315 PF07726 ATPase family associated with various cellular activities (AAA) RD12_RS08320 PF01882 RD12_RS08320 RD12_RS08325 PF00092 von Willebrand factor type A domain RD12_RS08330 PF00092 von Willebrand factor type A domain RD12_RS08330 PF07719 Tetratricopeptide repeat RD12_RS08335 PF13584 RD12_RS08335 RD12_RS08340 PF12710 haloacid dehalogenase-like hydrolase RD12_RS08345 PF00884 Sulfatase RD12_RS08355 PF00665 Integrase core domain RD12_RS08355 PF13011 RD12_RS08355 RD12_RS08365 PF07695 RD12_RS08365 RD12_RS08370 PF00072 Response regulator receiver domain RD12_RS08370 PF00196 Bacterial regulatory proteins, luxR family RD12_RS08375 PF03797 Autotransporter beta-domain RD12_RS08375 PF12951 RD12_RS08375 RD12_RS08380 PF01381 Helix-turn-helix RD12_RS08385 PF06296 RD12_RS08385 RD12_RS08390 PF02798 Glutathione S-transferase, N-terminal domain RD12_RS08390 PF14497 Glutathione S-transferase, C-terminal domain RD12_RS08395 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD12_RS08400 PF03466 LysR substrate binding domain RD12_RS08405 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS08410 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS08415 PF01070 FMN-dependent dehydrogenase RD12_RS08420 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD12_RS08425 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS08430 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS08435 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS08440 PF03466 LysR substrate binding domain RD12_RS08445 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS08460 PF00665 Integrase core domain RD12_RS08460 PF13011 RD12_RS08460 RD12_RS08470 PF03358 NADPH-dependent FMN reductase RD12_RS08480 PF07690 Major Facilitator Superfamily RD12_RS08485 PF12840 Helix-turn-helix domain RD12_RS08495 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS08500 PF00106 short chain dehydrogenase RD12_RS08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS08505 PF03466 LysR substrate binding domain RD12_RS08515 PF00665 Integrase core domain RD12_RS08515 PF13011 RD12_RS08515 RD12_RS08520 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS08525 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD12_RS08525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD12_RS08525 PF04039 RD12_RS08525 RD12_RS08525 PF13244 RD12_RS08525 RD12_RS08530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD12_RS08535 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD12_RS08540 PF01899 RD12_RS08540 RD12_RS08545 PF04066 RD12_RS08545 RD12_RS08550 PF03334 RD12_RS08550 RD12_RS08555 PF00665 Integrase core domain RD12_RS08555 PF13011 RD12_RS08555 RD12_RS08565 PF12710 haloacid dehalogenase-like hydrolase RD12_RS08570 PF14437 RD12_RS08570 RD12_RS08575 PF02016 LD-carboxypeptidase RD12_RS08580 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS08585 PF06808 RD12_RS08585 RD12_RS08590 PF04290 RD12_RS08590 RD12_RS08595 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS08600 PF00005 ABC transporter RD12_RS08600 PF12848 ABC transporter RD12_RS08605 PF00005 ABC transporter RD12_RS08610 PF09084 NMT1/THI5 like RD12_RS08615 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS08620 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS08625 PF00665 Integrase core domain RD12_RS08625 PF13011 RD12_RS08625 RD12_RS08630 PF09424 Yqey-like protein RD12_RS08635 PF00042 Globin RD12_RS08635 PF00175 Oxidoreductase NAD-binding domain RD12_RS08635 PF00970 Oxidoreductase FAD-binding domain RD12_RS08640 PF02082 Transcriptional regulator RD12_RS08645 PF01266 FAD dependent oxidoreductase RD12_RS08655 PF00665 Integrase core domain RD12_RS08655 PF13011 RD12_RS08655 RD12_RS08665 PF02618 YceG-like family RD12_RS08670 PF02223 Thymidylate kinase RD12_RS08675 PF13177 DNA polymerase III, delta subunit RD12_RS08680 PF01026 TatD related DNase RD12_RS08685 PF12796 Ankyrin repeats (3 copies) RD12_RS08690 PF01614 Bacterial transcriptional regulator RD12_RS08690 PF09339 IclR helix-turn-helix domain RD12_RS08695 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS08705 PF00005 ABC transporter RD12_RS08715 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD12_RS08715 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD12_RS08720 PF00171 Aldehyde dehydrogenase family RD12_RS08725 PF01546 Peptidase family M20/M25/M40 RD12_RS08725 PF07687 Peptidase dimerisation domain RD12_RS08730 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS08730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS08730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS08735 PF03328 HpcH/HpaI aldolase/citrate lyase family RD12_RS08740 PF06808 RD12_RS08740 RD12_RS08745 PF04290 RD12_RS08745 RD12_RS08750 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS08755 PF00392 Bacterial regulatory proteins, gntR family RD12_RS08755 PF07729 FCD domain RD12_RS08760 PF00665 Integrase core domain RD12_RS08760 PF13011 RD12_RS08760 RD12_RS08765 PF04343 RD12_RS08765 RD12_RS08770 PF00665 Integrase core domain RD12_RS08785 PF01425 Amidase RD12_RS08790 PF07286 Protein of unknown function (DUF1445) RD12_RS08795 PF00563 EAL domain RD12_RS08800 PF00072 Response regulator receiver domain RD12_RS08800 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS08800 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS08800 PF00989 PAS fold RD12_RS08800 PF01627 Hpt domain RD12_RS08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS08805 PF00072 Response regulator receiver domain RD12_RS08805 PF00196 Bacterial regulatory proteins, luxR family RD12_RS08810 PF05594 RD12_RS08810 RD12_RS08810 PF05860 haemagglutination activity domain RD12_RS08810 PF13018 RD12_RS08810 RD12_RS08810 PF13332 RD12_RS08810 RD12_RS08815 PF16970 RD12_RS08815 RD12_RS08820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RD12_RS08820 PF02753 Pili assembly chaperone PapD, C-terminal domain RD12_RS08825 PF00577 Outer membrane usher protein RD12_RS08825 PF13953 PapC C-terminal domain RD12_RS08825 PF13954 PapC N-terminal domain RD12_RS08835 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RD12_RS08835 PF08479 POTRA domain, ShlB-type RD12_RS08845 PF04290 RD12_RS08845 RD12_RS08850 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS08860 PF04290 RD12_RS08860 RD12_RS08865 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS08875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS08875 PF03466 LysR substrate binding domain RD12_RS08880 PF13463 Winged helix DNA-binding domain RD12_RS08885 PF01968 Hydantoinase/oxoprolinase RD12_RS08885 PF02538 RD12_RS08885 RD12_RS08885 PF05378 RD12_RS08885 RD12_RS08890 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase RD12_RS08900 PF00924 Mechanosensitive ion channel RD12_RS08905 PF01614 Bacterial transcriptional regulator RD12_RS08905 PF09339 IclR helix-turn-helix domain RD12_RS08910 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS08915 PF00588 SpoU rRNA Methylase family RD12_RS08920 PF00459 Inositol monophosphatase family RD12_RS08925 PF00571 CBS domain RD12_RS08925 PF03471 Transporter associated domain RD12_RS08925 PF03741 RD12_RS08925 RD12_RS08930 PF02673 RD12_RS08930 RD12_RS08935 PF00149 Calcineurin-like phosphoesterase RD12_RS08940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RD12_RS08945 PF14559 Tetratricopeptide repeat RD12_RS08950 PF01406 tRNA synthetases class I (C) catalytic domain RD12_RS08950 PF09190 DALR domain RD12_RS08955 PF00730 HhH-GPD superfamily base excision DNA repair protein RD12_RS08960 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RD12_RS08965 PF00665 Integrase core domain RD12_RS08965 PF13011 RD12_RS08965 RD12_RS08970 PF01171 PP-loop family RD12_RS08970 PF09179 TilS substrate binding domain RD12_RS08975 PF00696 Amino acid kinase family RD12_RS08975 PF01842 ACT domain RD12_RS08975 PF13840 ACT domain RD12_RS08985 PF01548 RD12_RS08985 RD12_RS08985 PF02371 RD12_RS08985 RD12_RS08990 PF07883 Cupin domain RD12_RS08995 PF07978 NIPSNAP RD12_RS09000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD12_RS09000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD12_RS09005 PF04290 RD12_RS09005 RD12_RS09010 PF06808 RD12_RS09010 RD12_RS09015 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS09020 PF00561 alpha/beta hydrolase fold RD12_RS09025 PF01958 Domain of unknown function DUF108 RD12_RS09025 PF03447 Homoserine dehydrogenase, NAD binding domain RD12_RS09030 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS09035 PF00440 Bacterial regulatory proteins, tetR family RD12_RS09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS09040 PF03466 LysR substrate binding domain RD12_RS09045 PF13416 Bacterial extracellular solute-binding protein RD12_RS09050 PF07969 Amidohydrolase family RD12_RS09055 PF07969 Amidohydrolase family RD12_RS09060 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS09065 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS09070 PF00005 ABC transporter RD12_RS09070 PF08402 TOBE domain RD12_RS09080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD12_RS09085 PF01614 Bacterial transcriptional regulator RD12_RS09085 PF09339 IclR helix-turn-helix domain RD12_RS09090 PF13380 CoA binding domain RD12_RS09090 PF13549 ATP-grasp domain RD12_RS09090 PF13607 Succinyl-CoA ligase like flavodoxin domain RD12_RS09095 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS09100 PF01042 Endoribonuclease L-PSP RD12_RS09105 PF01575 MaoC like domain RD12_RS09110 PF01575 MaoC like domain RD12_RS09120 PF12840 Helix-turn-helix domain RD12_RS09125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD12_RS09135 PF13641 Glycosyltransferase like family 2 RD12_RS09140 PF01522 Polysaccharide deacetylase RD12_RS09140 PF14883 Hypothetical glycosyl hydrolase family 13 RD12_RS09145 PF13432 Tetratricopeptide repeat RD12_RS09145 PF14559 Tetratricopeptide repeat RD12_RS09160 PF13463 Winged helix DNA-binding domain RD12_RS09165 PF00665 Integrase core domain RD12_RS09165 PF13011 RD12_RS09165 RD12_RS09170 PF00196 Bacterial regulatory proteins, luxR family RD12_RS09175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD12_RS09175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD12_RS09175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD12_RS09175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD12_RS09180 PF00342 Phosphoglucose isomerase RD12_RS09185 PF00132 Bacterial transferase hexapeptide (six repeats) RD12_RS09190 PF07690 Major Facilitator Superfamily RD12_RS09195 PF02146 Sir2 family RD12_RS09200 PF00459 Inositol monophosphatase family RD12_RS09205 PF00171 Aldehyde dehydrogenase family RD12_RS09210 PF00202 Aminotransferase class-III RD12_RS09215 PF00155 Aminotransferase class I and II RD12_RS09215 PF00392 Bacterial regulatory proteins, gntR family RD12_RS09220 PF01904 Protein of unknown function DUF72 RD12_RS09225 PF00580 UvrD/REP helicase N-terminal domain RD12_RS09225 PF13361 UvrD-like helicase C-terminal domain RD12_RS09230 PF01544 CorA-like Mg2+ transporter protein RD12_RS09235 PF00565 Staphylococcal nuclease homologue RD12_RS09240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS09245 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS09250 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS09255 PF00005 ABC transporter RD12_RS09255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS09260 PF12802 MarR family RD12_RS09265 PF00665 Integrase core domain RD12_RS09265 PF13011 RD12_RS09265 RD12_RS09275 PF08479 POTRA domain, ShlB-type RD12_RS09280 PF03707 RD12_RS09280 RD12_RS09285 PF04964 RD12_RS09285 RD12_RS09290 PF01478 Type IV leader peptidase family RD12_RS09295 PF07811 RD12_RS09295 RD12_RS09300 PF07811 RD12_RS09300 RD12_RS09305 PF08666 SAF domain RD12_RS09305 PF16976 RD12_RS09305 RD12_RS09310 PF00263 RD12_RS09310 RD12_RS09310 PF13629 RD12_RS09310 RD12_RS09320 PF00437 Type II/IV secretion system protein RD12_RS09325 PF00482 Type II secretion system (T2SS), protein F RD12_RS09330 PF00482 Type II secretion system (T2SS), protein F RD12_RS09335 PF13432 Tetratricopeptide repeat RD12_RS09345 PF09977 RD12_RS09345 RD12_RS09350 PF00158 Sigma-54 interaction domain RD12_RS09350 PF02954 Bacterial regulatory protein, Fis family RD12_RS09355 PF11180 RD12_RS09355 RD12_RS09360 PF06676 RD12_RS09360 RD12_RS09365 PF04542 Sigma-70 region 2 RD12_RS09365 PF08281 Sigma-70, region 4 RD12_RS09370 PF13668 Ferritin-like domain RD12_RS09375 PF00034 Cytochrome c RD12_RS09380 PF01132 Elongation factor P (EF-P) OB domain RD12_RS09380 PF08207 Elongation factor P (EF-P) KOW-like domain RD12_RS09380 PF09285 Elongation factor P, C-terminal RD12_RS09385 PF10093 RD12_RS09385 RD12_RS09390 PF11062 RD12_RS09390 RD12_RS09395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RD12_RS09400 PF00330 Aconitase family (aconitate hydratase) RD12_RS09400 PF00694 Aconitase C-terminal domain RD12_RS09410 PF00593 TonB dependent receptor RD12_RS09410 PF07715 TonB-dependent Receptor Plug Domain RD12_RS09415 PF13419 Haloacid dehalogenase-like hydrolase RD12_RS09420 PF00665 Integrase core domain RD12_RS09420 PF13011 RD12_RS09420 RD12_RS09425 PF00691 OmpA family RD12_RS09435 PF00330 Aconitase family (aconitate hydratase) RD12_RS09435 PF06434 Aconitate hydratase 2 N-terminus RD12_RS09435 PF11791 Aconitate B N-terminal domain RD12_RS09440 PF00929 Exonuclease RD12_RS09445 PF12643 RD12_RS09445 RD12_RS09450 PF03992 Antibiotic biosynthesis monooxygenase RD12_RS09455 PF03795 YCII-related domain RD12_RS09460 PF00892 EamA-like transporter family RD12_RS09465 PF01925 RD12_RS09465 RD12_RS09475 PF00665 Integrase core domain RD12_RS09475 PF13011 RD12_RS09475 RD12_RS09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS09480 PF03466 LysR substrate binding domain RD12_RS09485 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RD12_RS09485 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RD12_RS09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS09495 PF03466 LysR substrate binding domain RD12_RS09535 PF14542 GCN5-related N-acetyl-transferase RD12_RS09540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD12_RS09540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD12_RS09545 PF01425 Amidase RD12_RS09555 PF00171 Aldehyde dehydrogenase family RD12_RS09560 PF06144 DNA polymerase III, delta subunit RD12_RS09565 PF04390 Lipopolysaccharide-assembly RD12_RS09570 PF00133 tRNA synthetases class I (I, L, M and V) RD12_RS09570 PF08264 Anticodon-binding domain of tRNA RD12_RS09570 PF09334 tRNA synthetases class I (M) RD12_RS09570 PF13603 Leucyl-tRNA synthetase, Domain 2 RD12_RS09575 PF07690 Major Facilitator Superfamily RD12_RS09580 PF01047 MarR family RD12_RS09585 PF00216 Bacterial DNA-binding protein RD12_RS09590 PF00665 Integrase core domain RD12_RS09590 PF13011 RD12_RS09590 RD12_RS09595 PF00665 Integrase core domain RD12_RS09595 PF13011 RD12_RS09595 RD12_RS09600 PF00916 RD12_RS09600 RD12_RS09600 PF01740 STAS domain RD12_RS09605 PF00471 Ribosomal protein L33 RD12_RS09610 PF00830 Ribosomal L28 family RD12_RS09615 PF07690 Major Facilitator Superfamily RD12_RS09620 PF02353 Mycolic acid cyclopropane synthetase RD12_RS09625 PF00665 Integrase core domain RD12_RS09625 PF13011 RD12_RS09625 RD12_RS09630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RD12_RS09635 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS09640 PF00005 ABC transporter RD12_RS09645 PF01361 Tautomerase enzyme RD12_RS09650 PF00108 Thiolase, N-terminal domain RD12_RS09650 PF02803 Thiolase, C-terminal domain RD12_RS09660 PF00392 Bacterial regulatory proteins, gntR family RD12_RS09660 PF07729 FCD domain RD12_RS09665 PF05292 Malonyl-CoA decarboxylase (MCD) RD12_RS09670 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS09680 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS09685 PF00080 Copper/zinc superoxide dismutase (SODC) RD12_RS09690 PF04392 ABC transporter substrate binding protein RD12_RS09700 PF00005 ABC transporter RD12_RS09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS09705 PF03459 TOBE domain RD12_RS09710 PF13590 Domain of unknown function (DUF4136) RD12_RS09715 PF01734 Patatin-like phospholipase RD12_RS09715 PF12536 RD12_RS09715 RD12_RS09720 PF00486 Transcriptional regulatory protein, C terminal RD12_RS09725 PF16576 RD12_RS09725 RD12_RS09730 PF00873 AcrB/AcrD/AcrF family RD12_RS09735 PF02321 Outer membrane efflux protein RD12_RS09740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RD12_RS09745 PF01648 4'-phosphopantetheinyl transferase superfamily RD12_RS09750 PF00933 Glycosyl hydrolase family 3 N terminal domain RD12_RS09755 PF01541 GIY-YIG catalytic domain RD12_RS09755 PF02151 UvrB/uvrC motif RD12_RS09755 PF08459 UvrC Helix-hairpin-helix N-terminal RD12_RS09755 PF14520 Helix-hairpin-helix domain RD12_RS09760 PF01066 CDP-alcohol phosphatidyltransferase RD12_RS09765 PF07690 Major Facilitator Superfamily RD12_RS09775 PF14489 QueF-like protein RD12_RS09775 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RD12_RS09780 PF00463 Isocitrate lyase family RD12_RS09790 PF00665 Integrase core domain RD12_RS09790 PF13011 RD12_RS09790 RD12_RS09795 PF02653 RD12_RS09795 RD12_RS09800 PF02653 RD12_RS09800 RD12_RS09805 PF13458 Periplasmic binding protein RD12_RS09810 PF00355 Rieske [2Fe-2S] domain RD12_RS09810 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD12_RS09815 PF00866 Ring hydroxylating beta subunit RD12_RS09820 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS09825 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS09830 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS09835 PF02515 CoA-transferase family III RD12_RS09840 PF07859 alpha/beta hydrolase fold RD12_RS09845 PF00501 AMP-binding enzyme RD12_RS09845 PF14535 AMP-binding enzyme C-terminal domain RD12_RS09850 PF00108 Thiolase, N-terminal domain RD12_RS09850 PF02803 Thiolase, C-terminal domain RD12_RS09855 PF01796 RD12_RS09855 RD12_RS09855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD12_RS09860 PF12228 RD12_RS09860 RD12_RS09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS09865 PF03466 LysR substrate binding domain RD12_RS09870 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS09875 PF00665 Integrase core domain RD12_RS09875 PF13011 RD12_RS09875 RD12_RS09880 PF00665 Integrase core domain RD12_RS09880 PF13011 RD12_RS09880 RD12_RS09885 PF10262 Rdx family RD12_RS09890 PF01152 Bacterial-like globin RD12_RS09895 PF05940 RD12_RS09895 RD12_RS09905 PF03372 Endonuclease/Exonuclease/phosphatase family RD12_RS09910 PF07171 MlrC C-terminus RD12_RS09910 PF07364 Protein of unknown function (DUF1485) RD12_RS09920 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS09925 PF01425 Amidase RD12_RS09930 PF01425 Amidase RD12_RS09935 PF00561 alpha/beta hydrolase fold RD12_RS09940 PF01522 Polysaccharide deacetylase RD12_RS09945 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS09955 PF00665 Integrase core domain RD12_RS09955 PF13011 RD12_RS09955 RD12_RS09960 PF00665 Integrase core domain RD12_RS09960 PF13011 RD12_RS09960 RD12_RS09970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD12_RS09970 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS09975 PF01548 RD12_RS09975 RD12_RS09975 PF02371 RD12_RS09975 RD12_RS09990 PF01243 Pyridoxamine 5'-phosphate oxidase RD12_RS09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS09995 PF03466 LysR substrate binding domain RD12_RS10000 PF11720 Peptidase inhibitor I78 family RD12_RS10005 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS10005 PF01799 [2Fe-2S] binding domain RD12_RS10010 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD12_RS10015 PF02625 XdhC and CoxI family RD12_RS10015 PF13478 XdhC Rossmann domain RD12_RS10020 PF06719 RD12_RS10020 RD12_RS10020 PF12833 Helix-turn-helix domain RD12_RS10030 PF02190 ATP-dependent protease La (LON) domain RD12_RS10035 PF06983 3-demethylubiquinone-9 3-methyltransferase RD12_RS10040 PF07690 Major Facilitator Superfamily RD12_RS10045 PF04828 Glutathione-dependent formaldehyde-activating enzyme RD12_RS10050 PF00665 Integrase core domain RD12_RS10050 PF13011 RD12_RS10050 RD12_RS10055 PF00583 Acetyltransferase (GNAT) family RD12_RS10060 PF00665 Integrase core domain RD12_RS10060 PF13011 RD12_RS10060 RD12_RS10065 PF00005 ABC transporter RD12_RS10065 PF00664 ABC transporter transmembrane region RD12_RS10075 PF02535 RD12_RS10075 RD12_RS10085 PF00392 Bacterial regulatory proteins, gntR family RD12_RS10085 PF07729 FCD domain RD12_RS10090 PF00916 RD12_RS10090 RD12_RS10090 PF01740 STAS domain RD12_RS10095 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RD12_RS10100 PF12840 Helix-turn-helix domain RD12_RS10105 PF12697 Alpha/beta hydrolase family RD12_RS10110 PF03625 Domain of unknown function DUF302 RD12_RS10115 PF11450 RD12_RS10115 RD12_RS10120 PF01965 DJ-1/PfpI family RD12_RS10120 PF12833 Helix-turn-helix domain RD12_RS10125 PF07237 Protein of unknown function (DUF1428) RD12_RS10130 PF02567 Phenazine biosynthesis-like protein RD12_RS10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS10135 PF03466 LysR substrate binding domain RD12_RS10140 PF04286 RD12_RS10140 RD12_RS10150 PF02525 Flavodoxin-like fold RD12_RS10155 PF00171 Aldehyde dehydrogenase family RD12_RS10160 PF00158 Sigma-54 interaction domain RD12_RS10160 PF01590 GAF domain RD12_RS10160 PF02954 Bacterial regulatory protein, Fis family RD12_RS10165 PF00665 Integrase core domain RD12_RS10165 PF13011 RD12_RS10165 RD12_RS10170 PF00665 Integrase core domain RD12_RS10170 PF13011 RD12_RS10170 RD12_RS10175 PF04172 RD12_RS10175 RD12_RS10180 PF03788 RD12_RS10180 RD12_RS10185 PF13500 AAA domain RD12_RS10185 PF13649 Methyltransferase domain RD12_RS10195 PF00155 Aminotransferase class I and II RD12_RS10200 PF00202 Aminotransferase class-III RD12_RS10205 PF00665 Integrase core domain RD12_RS10205 PF13011 RD12_RS10205 RD12_RS10210 PF00122 E1-E2 ATPase RD12_RS10215 PF03597 RD12_RS10215 RD12_RS10225 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO RD12_RS10235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD12_RS10235 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RD12_RS10240 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RD12_RS10240 PF12801 RD12_RS10240 RD12_RS10240 PF13746 4Fe-4S dicluster domain RD12_RS10255 PF01925 RD12_RS10255 RD12_RS10260 PF13527 Acetyltransferase (GNAT) domain RD12_RS10265 PF00005 ABC transporter RD12_RS10270 PF01061 RD12_RS10270 RD12_RS10275 PF01594 RD12_RS10275 RD12_RS10280 PF00665 Integrase core domain RD12_RS10280 PF13011 RD12_RS10280 RD12_RS10285 PF00665 Integrase core domain RD12_RS10285 PF13011 RD12_RS10285 RD12_RS10300 PF00140 Sigma-70 factor, region 1 RD12_RS10300 PF03979 Sigma-70 factor, region 1 RD12_RS10300 PF04539 Sigma-70 region 3 RD12_RS10300 PF04542 Sigma-70 region 2 RD12_RS10300 PF04545 Sigma-70, region 4 RD12_RS10300 PF04546 Sigma-70, non-essential region RD12_RS10305 PF01807 CHC2 zinc finger RD12_RS10305 PF08275 DNA primase catalytic core, N-terminal domain RD12_RS10305 PF08278 DNA primase DnaG DnaB-binding RD12_RS10305 PF10410 DnaB-helicase binding domain of primase RD12_RS10305 PF13662 Toprim domain RD12_RS10310 PF01165 Ribosomal protein S21 RD12_RS10315 PF00156 Phosphoribosyl transferase domain RD12_RS10320 PF00709 Adenylosuccinate synthetase RD12_RS10325 PF13393 Histidyl-tRNA synthetase RD12_RS10330 PF01145 SPFH domain / Band 7 family RD12_RS10335 PF01145 SPFH domain / Band 7 family RD12_RS10335 PF12221 RD12_RS10335 RD12_RS10340 PF01926 50S ribosome-binding GTPase RD12_RS10340 PF13167 RD12_RS10340 RD12_RS10340 PF16360 RD12_RS10340 RD12_RS10350 PF00155 Aminotransferase class I and II RD12_RS10355 PF01926 50S ribosome-binding GTPase RD12_RS10355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RD12_RS10360 PF13360 PQQ-like domain RD12_RS10365 PF09976 Tetratricopeptide repeat RD12_RS10370 PF03129 Anticodon binding domain RD12_RS10370 PF13393 Histidyl-tRNA synthetase RD12_RS10375 PF04551 GcpE protein RD12_RS10380 PF13413 Helix-turn-helix domain RD12_RS10385 PF04055 Radical SAM superfamily RD12_RS10390 PF00334 Nucleoside diphosphate kinase RD12_RS10395 PF00133 tRNA synthetases class I (I, L, M and V) RD12_RS10395 PF08264 Anticodon-binding domain of tRNA RD12_RS10395 PF10458 Valyl tRNA synthetase tRNA binding arm RD12_RS10400 PF06629 RD12_RS10400 RD12_RS10405 PF00072 Response regulator receiver domain RD12_RS10410 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS10415 PF00665 Integrase core domain RD12_RS10415 PF13011 RD12_RS10415 RD12_RS10420 PF00665 Integrase core domain RD12_RS10420 PF13011 RD12_RS10420 RD12_RS10425 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease RD12_RS10430 PF00266 Aminotransferase class-V RD12_RS10435 PF01746 tRNA (Guanine-1)-methyltransferase RD12_RS10440 PF01782 RimM N-terminal domain RD12_RS10445 PF00886 Ribosomal protein S16 RD12_RS10455 PF01206 Sulfurtransferase TusA RD12_RS10460 PF01411 tRNA synthetases class II (A) RD12_RS10460 PF02272 DHHA1 domain RD12_RS10460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD12_RS10470 PF08805 PilS N terminal RD12_RS10480 PF00437 Type II/IV secretion system protein RD12_RS10490 PF06864 RD12_RS10490 RD12_RS10505 PF01425 Amidase RD12_RS10510 PF00005 ABC transporter RD12_RS10510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS10515 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS10515 PF12911 RD12_RS10515 RD12_RS10520 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS10525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS10535 PF07287 RD12_RS10535 RD12_RS10540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS10540 PF03466 LysR substrate binding domain RD12_RS10545 PF13416 Bacterial extracellular solute-binding protein RD12_RS10550 PF01266 FAD dependent oxidoreductase RD12_RS10555 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS10555 PF00175 Oxidoreductase NAD-binding domain RD12_RS10555 PF00970 Oxidoreductase FAD-binding domain RD12_RS10560 PF02261 Aspartate decarboxylase RD12_RS10565 PF03473 MOSC domain RD12_RS10565 PF03476 MOSC N-terminal beta barrel domain RD12_RS10570 PF00392 Bacterial regulatory proteins, gntR family RD12_RS10570 PF07702 UTRA domain RD12_RS10575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD12_RS10580 PF07005 Protein of unknown function, DUF1537 RD12_RS10580 PF17042 RD12_RS10580 RD12_RS10585 PF03812 RD12_RS10585 RD12_RS10590 PF00665 Integrase core domain RD12_RS10590 PF13011 RD12_RS10590 RD12_RS10595 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS10600 PF00665 Integrase core domain RD12_RS10600 PF13011 RD12_RS10600 RD12_RS10610 PF04384 Iron-sulphur cluster assembly RD12_RS10615 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS10620 PF00012 Hsp70 protein RD12_RS10625 PF07743 HSCB C-terminal oligomerisation domain RD12_RS10630 PF01521 Iron-sulphur cluster biosynthesis RD12_RS10635 PF01592 NifU-like N terminal domain RD12_RS10640 PF00266 Aminotransferase class-V RD12_RS10645 PF02082 Transcriptional regulator RD12_RS10650 PF01451 Low molecular weight phosphotyrosine protein phosphatase RD12_RS10655 PF00271 Helicase conserved C-terminal domain RD12_RS10655 PF02151 UvrB/uvrC motif RD12_RS10655 PF04851 Type III restriction enzyme, res subunit RD12_RS10655 PF12344 Ultra-violet resistance protein B RD12_RS10660 PF00155 Aminotransferase class I and II RD12_RS10665 PF00717 Peptidase S24-like RD12_RS10665 PF01726 LexA DNA binding domain RD12_RS10670 PF03797 Autotransporter beta-domain RD12_RS10680 PF00665 Integrase core domain RD12_RS10680 PF13011 RD12_RS10680 RD12_RS10685 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS10690 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS10695 PF01144 Coenzyme A transferase RD12_RS10700 PF01144 Coenzyme A transferase RD12_RS10710 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS10710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS10715 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS10720 PF02803 Thiolase, C-terminal domain RD12_RS10725 PF01796 RD12_RS10725 RD12_RS10725 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) RD12_RS10730 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS10735 PF01575 MaoC like domain RD12_RS10740 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS10745 PF02515 CoA-transferase family III RD12_RS10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS10750 PF03466 LysR substrate binding domain RD12_RS10755 PF00004 ATPase family associated with various cellular activities (AAA) RD12_RS10755 PF02190 ATP-dependent protease La (LON) domain RD12_RS10755 PF05362 Lon protease (S16) C-terminal proteolytic domain RD12_RS10760 PF06689 ClpX C4-type zinc finger RD12_RS10760 PF07724 AAA domain (Cdc48 subfamily) RD12_RS10760 PF10431 C-terminal, D2-small domain, of ClpB protein RD12_RS10765 PF00574 Clp protease RD12_RS10770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD12_RS10770 PF05697 Bacterial trigger factor protein (TF) RD12_RS10770 PF05698 Bacterial trigger factor protein (TF) C-terminus RD12_RS10775 PF03350 RD12_RS10775 RD12_RS10780 PF00313 'Cold-shock' DNA-binding domain RD12_RS10785 PF06041 Bacterial protein of unknown function (DUF924) RD12_RS10790 PF00313 'Cold-shock' DNA-binding domain RD12_RS10805 PF03797 Autotransporter beta-domain RD12_RS10810 PF13663 RD12_RS10810 RD12_RS10825 PF00132 Bacterial transferase hexapeptide (six repeats) RD12_RS10825 PF14602 Hexapeptide repeat of succinyl-transferase RD12_RS10825 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RD12_RS10830 PF01546 Peptidase family M20/M25/M40 RD12_RS10830 PF07687 Peptidase dimerisation domain RD12_RS10835 PF05175 Methyltransferase small domain RD12_RS10840 PF00005 ABC transporter RD12_RS10840 PF12848 ABC transporter RD12_RS10845 PF07715 TonB-dependent Receptor Plug Domain RD12_RS10850 PF00580 UvrD/REP helicase N-terminal domain RD12_RS10850 PF13361 UvrD-like helicase C-terminal domain RD12_RS10855 PF00487 RD12_RS10855 RD12_RS10855 PF01610 RD12_RS10855 RD12_RS10865 PF00665 Integrase core domain RD12_RS10865 PF13011 RD12_RS10865 RD12_RS10870 PF01189 NOL1/NOP2/sun family RD12_RS10875 PF01687 Riboflavin kinase RD12_RS10875 PF06574 FAD synthetase RD12_RS10880 PF00133 tRNA synthetases class I (I, L, M and V) RD12_RS10880 PF06827 Zinc finger found in FPG and IleRS RD12_RS10880 PF08264 Anticodon-binding domain of tRNA RD12_RS10885 PF01252 RD12_RS10885 RD12_RS10890 PF02441 Flavoprotein RD12_RS10890 PF04127 DNA / pantothenate metabolism flavoprotein RD12_RS10900 PF01037 AsnC family RD12_RS10900 PF13412 Winged helix-turn-helix DNA-binding RD12_RS10905 PF00665 Integrase core domain RD12_RS10905 PF13011 RD12_RS10905 RD12_RS10910 PF06078 Bacterial protein of unknown function (DUF937) RD12_RS10915 PF01471 Putative peptidoglycan binding domain RD12_RS10915 PF13406 Transglycosylase SLT domain RD12_RS10920 PF04305 RD12_RS10920 RD12_RS10925 PF04339 RD12_RS10925 RD12_RS10930 PF08909 RD12_RS10930 RD12_RS10940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD12_RS10940 PF02875 Mur ligase family, glutamate ligase domain RD12_RS10940 PF08245 Mur ligase middle domain RD12_RS10945 PF02222 ATP-grasp domain RD12_RS10945 PF02875 Mur ligase family, glutamate ligase domain RD12_RS10945 PF08245 Mur ligase middle domain RD12_RS10945 PF08443 RimK-like ATP-grasp domain RD12_RS10950 PF05532 CsbD-like RD12_RS10955 PF07043 RD12_RS10955 RD12_RS10960 PF04972 BON domain RD12_RS10965 PF00665 Integrase core domain RD12_RS10965 PF13011 RD12_RS10965 RD12_RS10970 PF00665 Integrase core domain RD12_RS10970 PF13011 RD12_RS10970 RD12_RS10975 PF00005 ABC transporter RD12_RS10980 PF13472 GDSL-like Lipase/Acylhydrolase family RD12_RS10985 PF13145 PPIC-type PPIASE domain RD12_RS10985 PF13624 SurA N-terminal domain RD12_RS10990 PF03009 Glycerophosphoryl diester phosphodiesterase family RD12_RS10995 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ RD12_RS11000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD12_RS11000 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS11005 PF00462 Glutaredoxin RD12_RS11005 PF08534 Redoxin RD12_RS11010 PF00403 Heavy-metal-associated domain RD12_RS11015 PF00376 MerR family regulatory protein RD12_RS11015 PF09278 MerR, DNA binding RD12_RS11020 PF05958 tRNA (Uracil-5-)-methyltransferase RD12_RS11025 PF09694 RD12_RS11025 RD12_RS11035 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RD12_RS11040 PF01476 LysM domain RD12_RS11040 PF01551 Peptidase family M23 RD12_RS11045 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RD12_RS11050 PF01975 Survival protein SurE RD12_RS11055 PF02660 RD12_RS11055 RD12_RS11060 PF01548 RD12_RS11060 RD12_RS11060 PF02371 RD12_RS11060 RD12_RS11065 PF00814 Glycoprotease family RD12_RS11070 PF00860 Permease family RD12_RS11080 PF00085 Thioredoxin RD12_RS11085 PF01205 Uncharacterized protein family UPF0029 RD12_RS11085 PF09186 Domain of unknown function (DUF1949) RD12_RS11090 PF00665 Integrase core domain RD12_RS11090 PF13011 RD12_RS11090 RD12_RS11095 PF00583 Acetyltransferase (GNAT) family RD12_RS11100 PF01047 MarR family RD12_RS11105 PF01380 SIS domain RD12_RS11105 PF01418 Helix-turn-helix domain, rpiR family RD12_RS11110 PF00202 Aminotransferase class-III RD12_RS11115 PF16868 RD12_RS11115 RD12_RS11120 PF06808 RD12_RS11120 RD12_RS11120 PF11874 RD12_RS11120 RD12_RS11125 PF00665 Integrase core domain RD12_RS11125 PF13011 RD12_RS11125 RD12_RS11135 PF03212 Pertactin RD12_RS11135 PF03797 Autotransporter beta-domain RD12_RS11135 PF12951 RD12_RS11135 RD12_RS11145 PF13091 PLD-like domain RD12_RS11145 PF13396 RD12_RS11145 RD12_RS11150 PF01740 STAS domain RD12_RS11155 PF13581 Histidine kinase-like ATPase domain RD12_RS11160 PF00842 Alanine racemase, C-terminal domain RD12_RS11160 PF01168 Alanine racemase, N-terminal domain RD12_RS11165 PF07690 Major Facilitator Superfamily RD12_RS11170 PF00672 HAMP domain RD12_RS11170 PF07228 Stage II sporulation protein E (SpoIIE) RD12_RS11170 PF08269 Cache domain RD12_RS11175 PF04392 ABC transporter substrate binding protein RD12_RS11195 PF04542 Sigma-70 region 2 RD12_RS11195 PF08281 Sigma-70, region 4 RD12_RS11200 PF00263 RD12_RS11200 RD12_RS11200 PF03958 Bacterial type II/III secretion system short domain RD12_RS11205 PF05932 Tir chaperone protein (CesT) family RD12_RS11210 PF01312 FlhB HrpN YscU SpaS Family RD12_RS11215 PF01311 RD12_RS11215 RD12_RS11220 PF01313 RD12_RS11220 RD12_RS11225 PF00813 RD12_RS11225 RD12_RS11230 PF01052 Surface presentation of antigens (SPOA) RD12_RS11240 PF07321 Type III secretion protein YscO RD12_RS11245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD12_RS11245 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD12_RS11250 PF06635 RD12_RS11250 RD12_RS11255 PF06578 RD12_RS11255 RD12_RS11260 PF01514 Secretory protein of YscJ/FliF family RD12_RS11265 PF17001 RD12_RS11265 RD12_RS11280 PF04888 RD12_RS11280 RD12_RS11305 PF07201 HrpJ-like domain RD12_RS11305 PF09059 TyeA RD12_RS11315 PF09474 RD12_RS11315 RD12_RS11325 PF00771 FHIPEP family RD12_RS11340 PF09392 Type III secretion needle MxiH like RD12_RS11345 PF05932 Tir chaperone protein (CesT) family RD12_RS11350 PF00665 Integrase core domain RD12_RS11350 PF13011 RD12_RS11350 RD12_RS11355 PF01272 Transcription elongation factor, GreA/GreB, C-term RD12_RS11355 PF03449 Transcription elongation factor, N-terminal RD12_RS11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD12_RS11360 PF00672 HAMP domain RD12_RS11360 PF02203 Tar ligand binding domain homologue RD12_RS11365 PF00860 Permease family RD12_RS11375 PF13343 Bacterial extracellular solute-binding protein RD12_RS11380 PF00665 Integrase core domain RD12_RS11380 PF13011 RD12_RS11380 RD12_RS11385 PF01266 FAD dependent oxidoreductase RD12_RS11390 PF13343 Bacterial extracellular solute-binding protein RD12_RS11395 PF13419 Haloacid dehalogenase-like hydrolase RD12_RS11400 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS11405 PF00005 ABC transporter RD12_RS11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS11410 PF03466 LysR substrate binding domain RD12_RS11420 PF00581 Rhodanese-like domain RD12_RS11430 PF01435 Peptidase family M48 RD12_RS11435 PF00107 Zinc-binding dehydrogenase RD12_RS11435 PF08240 Alcohol dehydrogenase GroES-like domain RD12_RS11440 PF00892 EamA-like transporter family RD12_RS11445 PF00892 EamA-like transporter family RD12_RS11450 PF01047 MarR family RD12_RS11460 PF13437 HlyD family secretion protein RD12_RS11460 PF13533 Biotin-lipoyl like RD12_RS11465 PF07690 Major Facilitator Superfamily RD12_RS11470 PF00180 Isocitrate/isopropylmalate dehydrogenase RD12_RS11475 PF00155 Aminotransferase class I and II RD12_RS11475 PF00392 Bacterial regulatory proteins, gntR family RD12_RS11480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS11490 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS11490 PF12911 RD12_RS11490 RD12_RS11495 PF00005 ABC transporter RD12_RS11495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS11500 PF00665 Integrase core domain RD12_RS11500 PF13011 RD12_RS11500 RD12_RS11505 PF00202 Aminotransferase class-III RD12_RS11510 PF07883 Cupin domain RD12_RS11515 PF00850 Histone deacetylase domain RD12_RS11520 PF01546 Peptidase family M20/M25/M40 RD12_RS11520 PF07687 Peptidase dimerisation domain RD12_RS11525 PF00892 EamA-like transporter family RD12_RS11530 PF00171 Aldehyde dehydrogenase family RD12_RS11535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD12_RS11540 PF00202 Aminotransferase class-III RD12_RS11545 PF01235 RD12_RS11545 RD12_RS11550 PF05872 RD12_RS11550 RD12_RS11555 PF01709 Transcriptional regulator RD12_RS11560 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD12_RS11560 PF02843 Phosphoribosylglycinamide synthetase, C domain RD12_RS11560 PF02844 Phosphoribosylglycinamide synthetase, N domain RD12_RS11565 PF01218 Coproporphyrinogen III oxidase RD12_RS11570 PF01467 Cytidylyltransferase RD12_RS11575 PF02410 Oligomerisation domain RD12_RS11580 PF02590 Predicted SPOUT methyltransferase RD12_RS11585 PF02545 Maf-like protein RD12_RS11590 PF03212 Pertactin RD12_RS11590 PF03797 Autotransporter beta-domain RD12_RS11625 PF00665 Integrase core domain RD12_RS11625 PF13011 RD12_RS11625 RD12_RS11630 PF10150 Ribonuclease E/G family RD12_RS11635 PF00800 Prephenate dehydratase RD12_RS11640 PF00440 Bacterial regulatory proteins, tetR family RD12_RS11645 PF07690 Major Facilitator Superfamily RD12_RS11650 PF00005 ABC transporter RD12_RS11650 PF00664 ABC transporter transmembrane region RD12_RS11655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD12_RS11660 PF02698 DUF218 domain RD12_RS11665 PF03692 RD12_RS11665 RD12_RS11670 PF13439 Glycosyltransferase Family 4 RD12_RS11670 PF13692 Glycosyl transferases group 1 RD12_RS11675 PF01522 Polysaccharide deacetylase RD12_RS11680 PF00884 Sulfatase RD12_RS11685 PF00534 Glycosyl transferases group 1 RD12_RS11685 PF13439 Glycosyltransferase Family 4 RD12_RS11690 PF00535 Glycosyl transferase family 2 RD12_RS11695 PF01522 Polysaccharide deacetylase RD12_RS11700 PF00534 Glycosyl transferases group 1 RD12_RS11700 PF13439 Glycosyltransferase Family 4 RD12_RS11705 PF01336 OB-fold nucleic acid binding domain RD12_RS11705 PF02811 PHP domain RD12_RS11705 PF07733 Bacterial DNA polymerase III alpha subunit RD12_RS11705 PF14579 Helix-hairpin-helix motif RD12_RS11710 PF05118 Aspartyl/Asparaginyl beta-hydroxylase RD12_RS11715 PF00271 Helicase conserved C-terminal domain RD12_RS11715 PF04408 Helicase associated domain (HA2) RD12_RS11715 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RD12_RS11715 PF11898 RD12_RS11715 RD12_RS11720 PF00583 Acetyltransferase (GNAT) family RD12_RS11720 PF00696 Amino acid kinase family RD12_RS11725 PF04362 Bacterial Fe(2+) trafficking RD12_RS11730 PF04185 Phosphoesterase family RD12_RS11730 PF05506 RD12_RS11730 RD12_RS11735 PF01895 PhoU domain RD12_RS11740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RD12_RS11745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS11745 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS11750 PF02646 RD12_RS11750 RD12_RS11755 PF10707 RD12_RS11755 RD12_RS11760 PF02245 Methylpurine-DNA glycosylase (MPG) RD12_RS11765 PF03960 ArsC family RD12_RS11770 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS11775 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS11780 PF00005 ABC transporter RD12_RS11780 PF08402 TOBE domain RD12_RS11785 PF13416 Bacterial extracellular solute-binding protein RD12_RS11790 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family RD12_RS11795 PF01152 Bacterial-like globin RD12_RS11800 PF02687 RD12_RS11800 RD12_RS11805 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS11810 PF04290 RD12_RS11810 RD12_RS11815 PF06808 RD12_RS11815 RD12_RS11820 PF00665 Integrase core domain RD12_RS11820 PF13011 RD12_RS11820 RD12_RS11835 PF00285 Citrate synthase RD12_RS11840 PF03937 Flavinator of succinate dehydrogenase RD12_RS11845 PF13085 2Fe-2S iron-sulfur cluster binding domain RD12_RS11845 PF13534 4Fe-4S dicluster domain RD12_RS11850 PF00890 FAD binding domain RD12_RS11850 PF02910 Fumarate reductase flavoprotein C-term RD12_RS11855 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD12_RS11860 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD12_RS11865 PF00392 Bacterial regulatory proteins, gntR family RD12_RS11865 PF07702 UTRA domain RD12_RS11870 PF00056 lactate/malate dehydrogenase, NAD binding domain RD12_RS11870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RD12_RS11880 PF00285 Citrate synthase RD12_RS11885 PF00330 Aconitase family (aconitate hydratase) RD12_RS11885 PF00694 Aconitase C-terminal domain RD12_RS11890 PF04303 PrpF protein RD12_RS11895 PF03972 MmgE/PrpD family RD12_RS11900 PF03653 RD12_RS11900 RD12_RS11905 PF01170 Putative RNA methylase family UPF0020 RD12_RS11905 PF02926 THUMP domain RD12_RS11915 PF06271 RD12_RS11915 RD12_RS11920 PF00149 Calcineurin-like phosphoesterase RD12_RS11925 PF00501 AMP-binding enzyme RD12_RS11925 PF13193 AMP-binding enzyme C-terminal domain RD12_RS11930 PF00132 Bacterial transferase hexapeptide (six repeats) RD12_RS11935 PF01430 Hsp33 protein RD12_RS11945 PF07883 Cupin domain RD12_RS11950 PF02627 Carboxymuconolactone decarboxylase family RD12_RS11955 PF13460 NADH(P)-binding RD12_RS11960 PF00486 Transcriptional regulatory protein, C terminal RD12_RS11965 PF04977 Septum formation initiator RD12_RS11970 PF00113 Enolase, C-terminal TIM barrel domain RD12_RS11970 PF03952 Enolase, N-terminal domain RD12_RS11975 PF07045 Protein of unknown function (DUF1330) RD12_RS11980 PF00793 DAHP synthetase I family RD12_RS11985 PF00117 Glutamine amidotransferase class-I RD12_RS11985 PF06418 CTP synthase N-terminus RD12_RS11990 PF00665 Integrase core domain RD12_RS11990 PF13011 RD12_RS11990 RD12_RS11995 PF00557 Metallopeptidase family M24 RD12_RS11995 PF01321 Creatinase/Prolidase N-terminal domain RD12_RS11995 PF16188 RD12_RS11995 RD12_RS11995 PF16189 RD12_RS11995 RD12_RS12000 PF04951 D-aminopeptidase RD12_RS12005 PF03576 Peptidase family S58 RD12_RS12010 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS12010 PF12911 RD12_RS12010 RD12_RS12015 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS12020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS12025 PF00005 ABC transporter RD12_RS12025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS12030 PF01112 Asparaginase RD12_RS12035 PF01380 SIS domain RD12_RS12035 PF01418 Helix-turn-helix domain, rpiR family RD12_RS12040 PF01144 Coenzyme A transferase RD12_RS12050 PF13279 Thioesterase-like superfamily RD12_RS12055 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase RD12_RS12055 PF13450 NAD(P)-binding Rossmann-like domain RD12_RS12060 PF01370 NAD dependent epimerase/dehydratase family RD12_RS12070 PF03992 Antibiotic biosynthesis monooxygenase RD12_RS12075 PF01212 Beta-eliminating lyase RD12_RS12080 PF00892 EamA-like transporter family RD12_RS12085 PF00501 AMP-binding enzyme RD12_RS12085 PF13193 AMP-binding enzyme C-terminal domain RD12_RS12085 PF16177 RD12_RS12085 RD12_RS12090 PF11700 RD12_RS12090 RD12_RS12095 PF03928 Domain of unknown function (DUF336) RD12_RS12100 PF00501 AMP-binding enzyme RD12_RS12100 PF13193 AMP-binding enzyme C-terminal domain RD12_RS12105 PF00877 NlpC/P60 family RD12_RS12110 PF10087 RD12_RS12110 RD12_RS12115 PF00665 Integrase core domain RD12_RS12115 PF13011 RD12_RS12115 RD12_RS12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS12120 PF03466 LysR substrate binding domain RD12_RS12125 PF00171 Aldehyde dehydrogenase family RD12_RS12130 PF13458 Periplasmic binding protein RD12_RS12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS12135 PF03466 LysR substrate binding domain RD12_RS12140 PF03739 RD12_RS12140 RD12_RS12145 PF00883 Cytosol aminopeptidase family, catalytic domain RD12_RS12145 PF02789 Cytosol aminopeptidase family, N-terminal domain RD12_RS12150 PF04364 DNA polymerase III chi subunit, HolC RD12_RS12160 PF01027 Inhibitor of apoptosis-promoting Bax1 RD12_RS12165 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS12170 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD12_RS12175 PF00665 Integrase core domain RD12_RS12175 PF13011 RD12_RS12175 RD12_RS12180 PF00291 Pyridoxal-phosphate dependent enzyme RD12_RS12185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS12185 PF03466 LysR substrate binding domain RD12_RS12190 PF02565 Recombination protein O C terminal RD12_RS12190 PF11967 Recombination protein O N terminal RD12_RS12195 PF01926 50S ribosome-binding GTPase RD12_RS12195 PF07650 KH domain RD12_RS12200 PF00035 Double-stranded RNA binding motif RD12_RS12200 PF14622 Ribonuclease-III-like RD12_RS12205 PF00717 Peptidase S24-like RD12_RS12205 PF10502 Signal peptidase, peptidase S26 RD12_RS12210 PF00009 Elongation factor Tu GTP binding domain RD12_RS12210 PF00679 Elongation factor G C-terminus RD12_RS12210 PF03144 Elongation factor Tu domain 2 RD12_RS12210 PF06421 GTP-binding protein LepA C-terminus RD12_RS12215 PF13180 PDZ domain RD12_RS12215 PF13365 Trypsin-like peptidase domain RD12_RS12220 PF03888 MucB/RseB family RD12_RS12220 PF17188 RD12_RS12220 RD12_RS12225 PF03872 Anti sigma-E protein RseA, N-terminal domain RD12_RS12230 PF04542 Sigma-70 region 2 RD12_RS12230 PF08281 Sigma-70, region 4 RD12_RS12240 PF00109 Beta-ketoacyl synthase, N-terminal domain RD12_RS12240 PF02801 Beta-ketoacyl synthase, C-terminal domain RD12_RS12245 PF00550 Phosphopantetheine attachment site RD12_RS12250 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS12255 PF00698 Acyl transferase domain RD12_RS12260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD12_RS12260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD12_RS12265 PF02504 Fatty acid synthesis protein RD12_RS12270 PF01783 Ribosomal L32p protein family RD12_RS12275 PF02620 RD12_RS12275 RD12_RS12280 PF02545 Maf-like protein RD12_RS12285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD12_RS12290 PF01471 Putative peptidoglycan binding domain RD12_RS12290 PF01510 N-acetylmuramoyl-L-alanine amidase RD12_RS12295 PF12805 RD12_RS12295 RD12_RS12295 PF13515 RD12_RS12295 RD12_RS12300 PF07690 Major Facilitator Superfamily RD12_RS12305 PF03883 RD12_RS12305 RD12_RS12310 PF00665 Integrase core domain RD12_RS12310 PF13011 RD12_RS12310 RD12_RS12315 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS12320 PF00999 Sodium/hydrogen exchanger family RD12_RS12330 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RD12_RS12335 PF13523 Acetyltransferase (GNAT) domain RD12_RS12340 PF04183 IucA / IucC family RD12_RS12340 PF06276 Ferric iron reductase FhuF-like transporter RD12_RS12345 PF11575 RD12_RS12345 RD12_RS12350 PF00355 Rieske [2Fe-2S] domain RD12_RS12350 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD12_RS12355 PF12833 Helix-turn-helix domain RD12_RS12360 PF07690 Major Facilitator Superfamily RD12_RS12365 PF00593 TonB dependent receptor RD12_RS12365 PF07715 TonB-dependent Receptor Plug Domain RD12_RS12370 PF01914 RD12_RS12370 RD12_RS12380 PF00990 GGDEF domain RD12_RS12405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD12_RS12405 PF02403 Seryl-tRNA synthetase N-terminal domain RD12_RS12410 PF00004 ATPase family associated with various cellular activities (AAA) RD12_RS12410 PF12002 MgsA AAA+ ATPase C terminal RD12_RS12410 PF16193 RD12_RS12410 RD12_RS12415 PF03548 Outer membrane lipoprotein carrier protein LolA RD12_RS12420 PF01580 FtsK/SpoIIIE family RD12_RS12420 PF09397 Ftsk gamma domain RD12_RS12420 PF13491 RD12_RS12420 RD12_RS12425 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS12430 PF01713 Smr domain RD12_RS12435 PF00893 Small Multidrug Resistance protein RD12_RS12440 PF00665 Integrase core domain RD12_RS12440 PF13011 RD12_RS12440 RD12_RS12445 PF00665 Integrase core domain RD12_RS12445 PF13011 RD12_RS12445 RD12_RS12450 PF00474 Sodium:solute symporter family RD12_RS12455 PF13937 RD12_RS12455 RD12_RS12460 PF03814 RD12_RS12460 RD12_RS12465 PF00122 E1-E2 ATPase RD12_RS12465 PF00702 haloacid dehalogenase-like hydrolase RD12_RS12470 PF02669 RD12_RS12470 RD12_RS12475 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS12475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS12475 PF02702 Osmosensitive K+ channel His kinase sensor domain RD12_RS12475 PF13492 GAF domain RD12_RS12475 PF13493 Domain of unknown function (DUF4118) RD12_RS12480 PF00072 Response regulator receiver domain RD12_RS12480 PF00486 Transcriptional regulatory protein, C terminal RD12_RS12485 PF00665 Integrase core domain RD12_RS12485 PF13011 RD12_RS12485 RD12_RS12490 PF04932 RD12_RS12490 RD12_RS12495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD12_RS12500 PF00180 Isocitrate/isopropylmalate dehydrogenase RD12_RS12505 PF08897 RD12_RS12505 RD12_RS12510 PF00034 Cytochrome c RD12_RS12515 PF00034 Cytochrome c RD12_RS12520 PF00665 Integrase core domain RD12_RS12520 PF13011 RD12_RS12520 RD12_RS12525 PF00004 ATPase family associated with various cellular activities (AAA) RD12_RS12530 PF05762 VWA domain containing CoxE-like protein RD12_RS12535 PF13420 Acetyltransferase (GNAT) domain RD12_RS12545 PF00675 Insulinase (Peptidase family M16) RD12_RS12545 PF05193 Peptidase M16 inactive domain RD12_RS12550 PF00226 DnaJ domain RD12_RS12550 PF00684 DnaJ central domain RD12_RS12550 PF01556 DnaJ C terminal domain RD12_RS12555 PF00012 Hsp70 protein RD12_RS12565 PF01025 GrpE RD12_RS12575 PF00762 Ferrochelatase RD12_RS12580 PF01628 HrcA protein C terminal domain RD12_RS12580 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RD12_RS12585 PF01513 ATP-NAD kinase RD12_RS12590 PF02463 RecF/RecN/SMC N terminal domain RD12_RS12595 PF01475 Ferric uptake regulator family RD12_RS12600 PF04355 SmpA / OmlA family RD12_RS12605 PF01113 Dihydrodipicolinate reductase, N-terminus RD12_RS12605 PF05173 Dihydrodipicolinate reductase, C-terminus RD12_RS12610 PF01565 FAD binding domain RD12_RS12610 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RD12_RS12620 PF00561 alpha/beta hydrolase fold RD12_RS12625 PF03972 MmgE/PrpD family RD12_RS12630 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS12635 PF00551 Formyl transferase RD12_RS12640 PF04268 Sarcosine oxidase, gamma subunit family RD12_RS12645 PF01571 Aminomethyltransferase folate-binding domain RD12_RS12645 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS12645 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD12_RS12645 PF13510 2Fe-2S iron-sulfur cluster binding domain RD12_RS12650 PF04267 Sarcosine oxidase, delta subunit family RD12_RS12655 PF01266 FAD dependent oxidoreductase RD12_RS12660 PF01244 Membrane dipeptidase (Peptidase family M19) RD12_RS12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS12665 PF03466 LysR substrate binding domain RD12_RS12670 PF02615 Malate/L-lactate dehydrogenase RD12_RS12675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD12_RS12675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD12_RS12680 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS12685 PF00665 Integrase core domain RD12_RS12685 PF13011 RD12_RS12685 RD12_RS12695 PF00482 Type II secretion system (T2SS), protein F RD12_RS12700 PF00437 Type II/IV secretion system protein RD12_RS12700 PF00498 FHA domain RD12_RS12705 PF00263 RD12_RS12705 RD12_RS12705 PF13629 RD12_RS12705 RD12_RS12710 PF08666 SAF domain RD12_RS12710 PF16976 RD12_RS12710 RD12_RS12735 PF08085 RD12_RS12735 RD12_RS12740 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD12_RS12745 PF00719 Inorganic pyrophosphatase RD12_RS12750 PF07219 RD12_RS12750 RD12_RS12755 PF04375 RD12_RS12755 RD12_RS12760 PF02602 Uroporphyrinogen-III synthase HemD RD12_RS12765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RD12_RS12765 PF03900 Porphobilinogen deaminase, C-terminal domain RD12_RS12770 PF03741 RD12_RS12770 RD12_RS12775 PF03741 RD12_RS12775 RD12_RS12780 PF00549 CoA-ligase RD12_RS12780 PF02629 CoA binding domain RD12_RS12785 PF00549 CoA-ligase RD12_RS12785 PF08442 ATP-grasp domain RD12_RS12790 PF11136 RD12_RS12790 RD12_RS12795 PF01717 Cobalamin-independent synthase, Catalytic domain RD12_RS12795 PF08267 Cobalamin-independent synthase, N-terminal domain RD12_RS12800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS12800 PF03466 LysR substrate binding domain RD12_RS12805 PF02631 RecX family RD12_RS12810 PF00154 recA bacterial DNA recombination protein RD12_RS12815 PF00072 Response regulator receiver domain RD12_RS12815 PF00486 Transcriptional regulatory protein, C terminal RD12_RS12820 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS12820 PF00672 HAMP domain RD12_RS12820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS12820 PF08521 RD12_RS12820 RD12_RS12825 PF00083 Sugar (and other) transporter RD12_RS12830 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS12835 PF00005 ABC transporter RD12_RS12835 PF08402 TOBE domain RD12_RS12840 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS12845 PF13343 Bacterial extracellular solute-binding protein RD12_RS12850 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS12855 PF01575 MaoC like domain RD12_RS12860 PF01796 RD12_RS12860 RD12_RS12860 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) RD12_RS12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS12870 PF03466 LysR substrate binding domain RD12_RS12875 PF02515 CoA-transferase family III RD12_RS12885 PF04381 Putative exonuclease, RdgC RD12_RS12890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD12_RS12890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD12_RS12905 PF08085 RD12_RS12905 RD12_RS12910 PF04231 Endonuclease I RD12_RS12930 PF00665 Integrase core domain RD12_RS12930 PF13011 RD12_RS12930 RD12_RS12940 PF04366 RD12_RS12940 RD12_RS12955 PF13411 MerR HTH family regulatory protein RD12_RS12960 PF00216 Bacterial DNA-binding protein RD12_RS12965 PF01588 Putative tRNA binding domain RD12_RS12965 PF03147 Ferredoxin-fold anticodon binding domain RD12_RS12965 PF03483 B3/4 domain RD12_RS12965 PF03484 tRNA synthetase B5 domain RD12_RS12970 PF01409 tRNA synthetases class II core domain (F) RD12_RS12970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RD12_RS12975 PF00453 Ribosomal protein L20 RD12_RS12980 PF01632 Ribosomal protein L35 RD12_RS12985 PF00665 Integrase core domain RD12_RS12985 PF13011 RD12_RS12985 RD12_RS12990 PF00692 dUTPase RD12_RS12995 PF00665 Integrase core domain RD12_RS12995 PF13011 RD12_RS12995 RD12_RS13000 PF00155 Aminotransferase class I and II RD12_RS13000 PF00392 Bacterial regulatory proteins, gntR family RD12_RS13010 PF00665 Integrase core domain RD12_RS13010 PF13011 RD12_RS13010 RD12_RS13015 PF13458 Periplasmic binding protein RD12_RS13020 PF02653 RD12_RS13020 RD12_RS13025 PF02653 RD12_RS13025 RD12_RS13025 PF11862 RD12_RS13025 RD12_RS13030 PF00005 ABC transporter RD12_RS13030 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS13035 PF00005 ABC transporter RD12_RS13040 PF01177 Asp/Glu/Hydantoin racemase RD12_RS13050 PF13417 Glutathione S-transferase, N-terminal domain RD12_RS13055 PF00892 EamA-like transporter family RD12_RS13060 PF00665 Integrase core domain RD12_RS13060 PF13011 RD12_RS13060 RD12_RS13065 PF04235 RD12_RS13065 RD12_RS13070 PF00521 DNA gyrase/topoisomerase IV, subunit A RD12_RS13070 PF03989 DNA gyrase C-terminal domain, beta-propeller RD12_RS13075 PF14317 RD12_RS13075 RD12_RS13080 PF00204 DNA gyrase B RD12_RS13080 PF00986 DNA gyrase B subunit, carboxyl terminus RD12_RS13080 PF01751 Toprim domain RD12_RS13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS13085 PF00085 Thioredoxin RD12_RS13090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD12_RS13090 PF07497 Rho termination factor, RNA-binding domain RD12_RS13090 PF07498 Rho termination factor, N-terminal domain RD12_RS13100 PF03710 Glutamate-ammonia ligase adenylyltransferase RD12_RS13100 PF08335 GlnD PII-uridylyltransferase RD12_RS13105 PF02677 RD12_RS13105 RD12_RS13110 PF03313 RD12_RS13110 RD12_RS13110 PF03315 Serine dehydratase beta chain RD12_RS13115 PF02690 RD12_RS13115 RD12_RS13120 PF01738 Dienelactone hydrolase family RD12_RS13125 PF02535 RD12_RS13125 RD12_RS13130 PF00476 DNA polymerase family A RD12_RS13130 PF01367 5'-3' exonuclease, C-terminal SAM fold RD12_RS13130 PF01612 3'-5' exonuclease RD12_RS13130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RD12_RS13135 PF03641 Possible lysine decarboxylase RD12_RS13145 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD12_RS13145 PF03440 Aerolysin/Pertussis toxin (APT) domain RD12_RS13150 PF00009 Elongation factor Tu GTP binding domain RD12_RS13150 PF00679 Elongation factor G C-terminus RD12_RS13150 PF03144 Elongation factor Tu domain 2 RD12_RS13155 PF01509 TruB family pseudouridylate synthase (N terminal domain) RD12_RS13155 PF16198 RD12_RS13155 RD12_RS13160 PF02033 Ribosome-binding factor A RD12_RS13165 PF00009 Elongation factor Tu GTP binding domain RD12_RS13165 PF04760 Translation initiation factor IF-2, N-terminal region RD12_RS13165 PF08364 RD12_RS13165 RD12_RS13165 PF11987 Translation-initiation factor 2 RD12_RS13170 PF00575 S1 RNA binding domain RD12_RS13170 PF08529 NusA N-terminal domain RD12_RS13170 PF13184 NusA-like KH domain RD12_RS13170 PF14520 Helix-hairpin-helix domain RD12_RS13175 PF02576 Uncharacterised BCR, YhbC family COG0779 RD12_RS13180 PF00849 RNA pseudouridylate synthase RD12_RS13180 PF01479 S4 domain RD12_RS13185 PF04079 Putative transcriptional regulators (Ypuh-like) RD12_RS13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS13195 PF03466 LysR substrate binding domain RD12_RS13200 PF00881 Nitroreductase family RD12_RS13205 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD12_RS13205 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD12_RS13225 PF13417 Glutathione S-transferase, N-terminal domain RD12_RS13225 PF14497 Glutathione S-transferase, C-terminal domain RD12_RS13230 PF02401 LytB protein RD12_RS13235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD12_RS13240 PF04002 RadC-like JAB domain RD12_RS13245 PF04199 Putative cyclase RD12_RS13250 PF03301 Tryptophan 2,3-dioxygenase RD12_RS13255 PF01197 Ribosomal protein L31 RD12_RS13265 PF01554 MatE RD12_RS13275 PF01925 RD12_RS13275 RD12_RS13280 PF13481 AAA domain RD12_RS13285 PF00092 von Willebrand factor type A domain RD12_RS13285 PF12034 RD12_RS13285 RD12_RS13285 PF12450 RD12_RS13285 RD12_RS13290 PF04542 Sigma-70 region 2 RD12_RS13290 PF08281 Sigma-70, region 4 RD12_RS13295 PF00665 Integrase core domain RD12_RS13295 PF13011 RD12_RS13295 RD12_RS13305 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS13310 PF00842 Alanine racemase, C-terminal domain RD12_RS13310 PF01168 Alanine racemase, N-terminal domain RD12_RS13315 PF00494 Squalene/phytoene synthase RD12_RS13320 PF00494 Squalene/phytoene synthase RD12_RS13325 PF01593 Flavin containing amine oxidoreductase RD12_RS13330 PF02537 RD12_RS13330 RD12_RS13335 PF03729 RD12_RS13335 RD12_RS13340 PF01061 RD12_RS13340 RD12_RS13345 PF00005 ABC transporter RD12_RS13350 PF16357 RD12_RS13350 RD12_RS13355 PF10029 RD12_RS13355 RD12_RS13360 PF10670 RD12_RS13360 RD12_RS13365 PF02424 ApbE family RD12_RS13370 PF00175 Oxidoreductase NAD-binding domain RD12_RS13370 PF00258 Flavodoxin RD12_RS13375 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS13380 PF07969 Amidohydrolase family RD12_RS13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS13385 PF03466 LysR substrate binding domain RD12_RS13390 PF10604 Polyketide cyclase / dehydrase and lipid transport RD12_RS13395 PF09370 TIM-barrel signal transduction protein RD12_RS13400 PF06792 Uncharacterised protein family (UPF0261) RD12_RS13405 PF00440 Bacterial regulatory proteins, tetR family RD12_RS13410 PF03797 Autotransporter beta-domain RD12_RS13415 PF03797 Autotransporter beta-domain RD12_RS13420 PF00665 Integrase core domain RD12_RS13420 PF13011 RD12_RS13420 RD12_RS13425 PF00004 ATPase family associated with various cellular activities (AAA) RD12_RS13425 PF02861 Clp amino terminal domain RD12_RS13425 PF07724 AAA domain (Cdc48 subfamily) RD12_RS13425 PF10431 C-terminal, D2-small domain, of ClpB protein RD12_RS13430 PF00027 Cyclic nucleotide-binding domain RD12_RS13430 PF13545 Crp-like helix-turn-helix domain RD12_RS13440 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS13445 PF00293 NUDIX domain RD12_RS13450 PF12843 RD12_RS13450 RD12_RS13460 PF04542 Sigma-70 region 2 RD12_RS13460 PF08281 Sigma-70, region 4 RD12_RS13460 PF12680 SnoaL-like domain RD12_RS13465 PF02627 Carboxymuconolactone decarboxylase family RD12_RS13470 PF04170 NlpE N-terminal domain RD12_RS13475 PF09791 RD12_RS13475 RD12_RS13490 PF03737 Demethylmenaquinone methyltransferase RD12_RS13495 PF00155 Aminotransferase class I and II RD12_RS13500 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS13505 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS13510 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS13515 PF00005 ABC transporter RD12_RS13520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS13520 PF03466 LysR substrate binding domain RD12_RS13525 PF00892 EamA-like transporter family RD12_RS13530 PF00665 Integrase core domain RD12_RS13530 PF13011 RD12_RS13530 RD12_RS13535 PF00665 Integrase core domain RD12_RS13535 PF13011 RD12_RS13535 RD12_RS13540 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD12_RS13545 PF04076 Bacterial OB fold (BOF) protein RD12_RS13560 PF06684 Amino acid synthesis RD12_RS13565 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS13570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD12_RS13570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD12_RS13575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS13575 PF03466 LysR substrate binding domain RD12_RS13580 PF00596 Class II Aldolase and Adducin N-terminal domain RD12_RS13585 PF02016 LD-carboxypeptidase RD12_RS13595 PF00474 Sodium:solute symporter family RD12_RS13600 PF07690 Major Facilitator Superfamily RD12_RS13605 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS13610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS13610 PF03466 LysR substrate binding domain RD12_RS13615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD12_RS13615 PF13378 Enolase C-terminal domain-like RD12_RS13620 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS13625 PF04909 Amidohydrolase RD12_RS13630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD12_RS13635 PF00665 Integrase core domain RD12_RS13635 PF13011 RD12_RS13635 RD12_RS13640 PF02567 Phenazine biosynthesis-like protein RD12_RS13645 PF12801 RD12_RS13645 RD12_RS13650 PF03239 RD12_RS13650 RD12_RS13655 PF13473 Cupredoxin-like domain RD12_RS13660 PF10634 Fe2+ transport protein RD12_RS13665 PF05233 RD12_RS13665 RD12_RS13665 PF07879 RD12_RS13665 RD12_RS13670 PF00106 short chain dehydrogenase RD12_RS13675 PF07167 RD12_RS13675 RD12_RS13680 PF02578 Multi-copper polyphenol oxidoreductase laccase RD12_RS13685 PF00849 RNA pseudouridylate synthase RD12_RS13685 PF01479 S4 domain RD12_RS13690 PF13525 Outer membrane lipoprotein RD12_RS13695 PF06733 DEAD_2 RD12_RS13695 PF13307 Helicase C-terminal domain RD12_RS13700 PF00575 S1 RNA binding domain RD12_RS13700 PF09371 Tex-like protein N-terminal domain RD12_RS13700 PF12836 Helix-hairpin-helix motif RD12_RS13700 PF16921 RD12_RS13700 RD12_RS13705 PF00579 tRNA synthetases class I (W and Y) RD12_RS13710 PF13011 RD12_RS13710 RD12_RS13715 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD12_RS13720 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS13725 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS13730 PF00665 Integrase core domain RD12_RS13730 PF13011 RD12_RS13730 RD12_RS13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS13735 PF03466 LysR substrate binding domain RD12_RS13740 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS13745 PF03969 AFG1-like ATPase RD12_RS13750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD12_RS13750 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS13755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD12_RS13755 PF00364 Biotin-requiring enzyme RD12_RS13755 PF02817 e3 binding domain RD12_RS13760 PF00676 Dehydrogenase E1 component RD12_RS13760 PF02779 Transketolase, pyrimidine binding domain RD12_RS13760 PF16078 RD12_RS13760 RD12_RS13760 PF16870 RD12_RS13760 RD12_RS13770 PF03169 RD12_RS13770 RD12_RS13775 PF01037 AsnC family RD12_RS13775 PF13412 Winged helix-turn-helix DNA-binding RD12_RS13780 PF00456 Transketolase, thiamine diphosphate binding domain RD12_RS13785 PF00390 Malic enzyme, N-terminal domain RD12_RS13785 PF01515 Phosphate acetyl/butaryl transferase RD12_RS13785 PF03949 Malic enzyme, NAD binding domain RD12_RS13790 PF16970 RD12_RS13790 RD12_RS13795 PF00665 Integrase core domain RD12_RS13795 PF13011 RD12_RS13795 RD12_RS13800 PF01272 Transcription elongation factor, GreA/GreB, C-term RD12_RS13800 PF03449 Transcription elongation factor, N-terminal RD12_RS13805 PF02811 PHP domain RD12_RS13810 PF12697 Alpha/beta hydrolase family RD12_RS13815 PF00665 Integrase core domain RD12_RS13815 PF13011 RD12_RS13815 RD12_RS13820 PF03772 RD12_RS13820 RD12_RS13820 PF13567 RD12_RS13820 RD12_RS13825 PF11924 Protein of unknown function (DUF3442) RD12_RS13835 PF03797 Autotransporter beta-domain RD12_RS13840 PF01026 TatD related DNase RD12_RS13845 PF00005 ABC transporter RD12_RS13850 PF02687 RD12_RS13850 RD12_RS13850 PF12704 MacB-like periplasmic core domain RD12_RS13860 PF01368 DHH family RD12_RS13860 PF02272 DHHA1 domain RD12_RS13865 PF00472 RF-1 domain RD12_RS13865 PF03462 PCRF domain RD12_RS13870 PF00106 short chain dehydrogenase RD12_RS13875 PF00152 tRNA synthetases class II (D, K and N) RD12_RS13875 PF01336 OB-fold nucleic acid binding domain RD12_RS13885 PF00440 Bacterial regulatory proteins, tetR family RD12_RS13890 PF00501 AMP-binding enzyme RD12_RS13895 PF00005 ABC transporter RD12_RS13900 PF13458 Periplasmic binding protein RD12_RS13910 PF02653 RD12_RS13910 RD12_RS13915 PF00005 ABC transporter RD12_RS13915 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS13920 PF00665 Integrase core domain RD12_RS13920 PF13011 RD12_RS13920 RD12_RS13925 PF00563 EAL domain RD12_RS13925 PF00990 GGDEF domain RD12_RS13925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS13930 PF00072 Response regulator receiver domain RD12_RS13930 PF00486 Transcriptional regulatory protein, C terminal RD12_RS13935 PF02696 RD12_RS13935 RD12_RS13940 PF09842 RD12_RS13940 RD12_RS13945 PF03631 RD12_RS13945 RD12_RS13950 PF00571 CBS domain RD12_RS13955 PF00665 Integrase core domain RD12_RS13955 PF13011 RD12_RS13955 RD12_RS13960 PF01207 Dihydrouridine synthase (Dus) RD12_RS13965 PF01636 Phosphotransferase enzyme family RD12_RS13975 PF00482 Type II secretion system (T2SS), protein F RD12_RS13980 PF00665 Integrase core domain RD12_RS13980 PF13011 RD12_RS13980 RD12_RS13985 PF01985 CRS1 / YhbY (CRM) domain RD12_RS13990 PF01728 FtsJ-like methyltransferase RD12_RS13995 PF00004 ATPase family associated with various cellular activities (AAA) RD12_RS13995 PF01434 Peptidase family M41 RD12_RS13995 PF06480 FtsH Extracellular RD12_RS14000 PF00809 Pterin binding enzyme RD12_RS14005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD12_RS14005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD12_RS14005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD12_RS14005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD12_RS14010 PF13444 Acetyltransferase (GNAT) domain RD12_RS14015 PF02541 Ppx/GppA phosphatase family RD12_RS14020 PF02503 Polyphosphate kinase middle domain RD12_RS14020 PF13089 Polyphosphate kinase N-terminal domain RD12_RS14020 PF13090 Polyphosphate kinase C-terminal domain RD12_RS14025 PF12849 PBP superfamily domain RD12_RS14030 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS14035 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS14040 PF00005 ABC transporter RD12_RS14050 PF00665 Integrase core domain RD12_RS14050 PF13011 RD12_RS14050 RD12_RS14055 PF01337 Barstar (barnase inhibitor) RD12_RS14065 PF00390 Malic enzyme, N-terminal domain RD12_RS14065 PF01515 Phosphate acetyl/butaryl transferase RD12_RS14065 PF03949 Malic enzyme, NAD binding domain RD12_RS14075 PF00155 Aminotransferase class I and II RD12_RS14080 PF01464 Transglycosylase SLT domain RD12_RS14085 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RD12_RS14095 PF07332 RD12_RS14095 RD12_RS14100 PF05957 RD12_RS14100 RD12_RS14110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD12_RS14110 PF10414 Sirohaem synthase dimerisation region RD12_RS14110 PF13241 Putative NAD(P)-binding RD12_RS14110 PF14824 Sirohaem biosynthesis protein central RD12_RS14115 PF03212 Pertactin RD12_RS14115 PF03797 Autotransporter beta-domain RD12_RS14120 PF01548 RD12_RS14120 RD12_RS14120 PF02371 RD12_RS14120 RD12_RS14125 PF14681 Uracil phosphoribosyltransferase RD12_RS14130 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RD12_RS14135 PF02547 Queuosine biosynthesis protein RD12_RS14140 PF01702 Queuine tRNA-ribosyltransferase RD12_RS14145 PF02699 Preprotein translocase subunit RD12_RS14150 PF02355 Protein export membrane protein RD12_RS14150 PF07549 SecD/SecF GG Motif RD12_RS14150 PF13721 SecD export protein N-terminal TM region RD12_RS14155 PF02355 Protein export membrane protein RD12_RS14155 PF07549 SecD/SecF GG Motif RD12_RS14160 PF01548 RD12_RS14160 RD12_RS14160 PF02371 RD12_RS14160 RD12_RS14170 PF00919 Uncharacterized protein family UPF0004 RD12_RS14170 PF01938 TRAM domain RD12_RS14170 PF04055 Radical SAM superfamily RD12_RS14175 PF02562 PhoH-like protein RD12_RS14180 PF02130 Uncharacterized protein family UPF0054 RD12_RS14185 PF00571 CBS domain RD12_RS14185 PF03471 Transporter associated domain RD12_RS14190 PF00795 Carbon-nitrogen hydrolase RD12_RS14195 PF00248 Aldo/keto reductase family RD12_RS14215 PF01548 RD12_RS14215 RD12_RS14215 PF02371 RD12_RS14215 RD12_RS14220 PF04344 Chemotaxis phosphatase, CheZ RD12_RS14225 PF00072 Response regulator receiver domain RD12_RS14230 PF00072 Response regulator receiver domain RD12_RS14230 PF01339 CheB methylesterase RD12_RS14240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD12_RS14240 PF00672 HAMP domain RD12_RS14240 PF02203 Tar ligand binding domain homologue RD12_RS14245 PF01584 CheW-like domain RD12_RS14250 PF01584 CheW-like domain RD12_RS14250 PF01627 Hpt domain RD12_RS14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS14250 PF02895 Signal transducing histidine kinase, homodimeric domain RD12_RS14250 PF09078 CheY binding RD12_RS14255 PF00072 Response regulator receiver domain RD12_RS14260 PF00691 OmpA family RD12_RS14260 PF13677 RD12_RS14260 RD12_RS14265 PF01618 RD12_RS14265 RD12_RS14270 PF05280 Flagellar transcriptional activator (FlhC) RD12_RS14275 PF05247 Flagellar transcriptional activator (FlhD) RD12_RS14280 PF04539 Sigma-70 region 3 RD12_RS14280 PF04542 Sigma-70 region 2 RD12_RS14280 PF04545 Sigma-70, region 4 RD12_RS14285 PF00665 Integrase core domain RD12_RS14285 PF13011 RD12_RS14285 RD12_RS14290 PF01176 Translation initiation factor 1A / IF-1 RD12_RS14300 PF01551 Peptidase family M23 RD12_RS14310 PF00994 Probable molybdopterin binding domain RD12_RS14320 PF03591 RD12_RS14320 RD12_RS14320 PF05437 RD12_RS14320 RD12_RS14325 PF13591 MerR HTH family regulatory protein RD12_RS14330 PF00226 DnaJ domain RD12_RS14330 PF01556 DnaJ C terminal domain RD12_RS14335 PF00583 Acetyltransferase (GNAT) family RD12_RS14340 PF05163 DinB family RD12_RS14345 PF00665 Integrase core domain RD12_RS14345 PF13011 RD12_RS14345 RD12_RS14350 PF02798 Glutathione S-transferase, N-terminal domain RD12_RS14350 PF14834 Glutathione S-transferase, C-terminal domain RD12_RS14355 PF11339 RD12_RS14355 RD12_RS14360 PF01515 Phosphate acetyl/butaryl transferase RD12_RS14365 PF00871 Acetokinase family RD12_RS14370 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS14375 PF00162 Phosphoglycerate kinase RD12_RS14380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD12_RS14380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD12_RS14385 PF00456 Transketolase, thiamine diphosphate binding domain RD12_RS14385 PF02779 Transketolase, pyrimidine binding domain RD12_RS14385 PF02780 Transketolase, C-terminal domain RD12_RS14390 PF04452 RNA methyltransferase RD12_RS14395 PF00665 Integrase core domain RD12_RS14395 PF13011 RD12_RS14395 RD12_RS14400 PF00669 Bacterial flagellin N-terminal helical region RD12_RS14400 PF00700 Bacterial flagellin C-terminal helical region RD12_RS14405 PF00364 Biotin-requiring enzyme RD12_RS14405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD12_RS14405 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS14415 PF00456 Transketolase, thiamine diphosphate binding domain RD12_RS14420 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS14420 PF08448 PAS fold RD12_RS14420 PF13188 PAS domain RD12_RS14425 PF00072 Response regulator receiver domain RD12_RS14425 PF00196 Bacterial regulatory proteins, luxR family RD12_RS14430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD12_RS14430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD12_RS14435 PF01432 Peptidase family M3 RD12_RS14440 PF02630 SCO1/SenC RD12_RS14445 PF04226 RD12_RS14445 RD12_RS14450 PF02321 Outer membrane efflux protein RD12_RS14455 PF00873 AcrB/AcrD/AcrF family RD12_RS14460 PF13533 Biotin-lipoyl like RD12_RS14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS14465 PF03466 LysR substrate binding domain RD12_RS14470 PF00849 RNA pseudouridylate synthase RD12_RS14470 PF01479 S4 domain RD12_RS14475 PF04345 Chorismate lyase RD12_RS14480 PF07690 Major Facilitator Superfamily RD12_RS14485 PF01548 RD12_RS14485 RD12_RS14485 PF02371 RD12_RS14485 RD12_RS14490 PF00248 Aldo/keto reductase family RD12_RS14495 PF00665 Integrase core domain RD12_RS14495 PF13011 RD12_RS14495 RD12_RS14500 PF00293 NUDIX domain RD12_RS14505 PF01245 Ribosomal protein L19 RD12_RS14510 PF00892 EamA-like transporter family RD12_RS14520 PF04055 Radical SAM superfamily RD12_RS14530 PF01507 Phosphoadenosine phosphosulfate reductase family RD12_RS14535 PF01507 Phosphoadenosine phosphosulfate reductase family RD12_RS14540 PF00005 ABC transporter RD12_RS14540 PF12857 RD12_RS14540 RD12_RS14545 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS14550 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS14560 PF13531 Bacterial extracellular solute-binding protein RD12_RS14565 PF00578 AhpC/TSA family RD12_RS14565 PF10417 C-terminal domain of 1-Cys peroxiredoxin RD12_RS14570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS14570 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS14570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS14570 PF12418 RD12_RS14570 RD12_RS14570 PF12806 RD12_RS14570 RD12_RS14575 PF00766 Electron transfer flavoprotein FAD-binding domain RD12_RS14575 PF01012 Electron transfer flavoprotein domain RD12_RS14580 PF01012 Electron transfer flavoprotein domain RD12_RS14585 PF00850 Histone deacetylase domain RD12_RS14590 PF13406 Transglycosylase SLT domain RD12_RS14595 PF00291 Pyridoxal-phosphate dependent enzyme RD12_RS14600 PF00665 Integrase core domain RD12_RS14600 PF13011 RD12_RS14600 RD12_RS14605 PF12836 Helix-hairpin-helix motif RD12_RS14610 PF01370 NAD dependent epimerase/dehydratase family RD12_RS14615 PF00294 pfkB family carbohydrate kinase RD12_RS14625 PF06305 RD12_RS14625 RD12_RS14630 PF00216 Bacterial DNA-binding protein RD12_RS14635 PF00575 S1 RNA binding domain RD12_RS14640 PF02224 Cytidylate kinase RD12_RS14645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD12_RS14650 PF02153 Prephenate dehydrogenase RD12_RS14655 PF00800 Prephenate dehydratase RD12_RS14655 PF01817 Chorismate mutase type II RD12_RS14655 PF01842 ACT domain RD12_RS14660 PF00266 Aminotransferase class-V RD12_RS14665 PF00521 DNA gyrase/topoisomerase IV, subunit A RD12_RS14665 PF03989 DNA gyrase C-terminal domain, beta-propeller RD12_RS14670 PF00691 OmpA family RD12_RS14675 PF13489 Methyltransferase domain RD12_RS14680 PF13419 Haloacid dehalogenase-like hydrolase RD12_RS14685 PF07690 Major Facilitator Superfamily RD12_RS14695 PF07927 YcfA-like protein RD12_RS14700 PF00665 Integrase core domain RD12_RS14700 PF13011 RD12_RS14700 RD12_RS14705 PF15919 RD12_RS14705 RD12_RS14710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS14710 PF03466 LysR substrate binding domain RD12_RS14715 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS14720 PF00665 Integrase core domain RD12_RS14720 PF13011 RD12_RS14720 RD12_RS14725 PF00817 impB/mucB/samB family RD12_RS14725 PF11798 IMS family HHH motif RD12_RS14725 PF11799 impB/mucB/samB family C-terminal domain RD12_RS14730 PF03061 Thioesterase superfamily RD12_RS14735 PF00326 Prolyl oligopeptidase family RD12_RS14740 PF00905 Penicillin binding protein transpeptidase domain RD12_RS14740 PF00912 Transglycosylase RD12_RS14740 PF17092 RD12_RS14740 RD12_RS14745 PF00149 Calcineurin-like phosphoesterase RD12_RS14750 PF03929 RD12_RS14750 RD12_RS14760 PF00248 Aldo/keto reductase family RD12_RS14765 PF00248 Aldo/keto reductase family RD12_RS14770 PF00005 ABC transporter RD12_RS14770 PF00664 ABC transporter transmembrane region RD12_RS14775 PF00355 Rieske [2Fe-2S] domain RD12_RS14780 PF00665 Integrase core domain RD12_RS14780 PF13011 RD12_RS14780 RD12_RS14795 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) RD12_RS14810 PF00665 Integrase core domain RD12_RS14810 PF13011 RD12_RS14810 RD12_RS14815 PF01039 Carboxyl transferase domain RD12_RS14820 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RD12_RS14820 PF02785 Biotin carboxylase C-terminal domain RD12_RS14820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD12_RS14825 PF00392 Bacterial regulatory proteins, gntR family RD12_RS14825 PF07702 UTRA domain RD12_RS14830 PF01370 NAD dependent epimerase/dehydratase family RD12_RS14835 PF04909 Amidohydrolase RD12_RS14845 PF00682 HMGL-like RD12_RS14845 PF02436 Conserved carboxylase domain RD12_RS14850 PF00364 Biotin-requiring enzyme RD12_RS14855 PF03972 MmgE/PrpD family RD12_RS14860 PF13487 HD domain RD12_RS14875 PF02253 Phospholipase A1 RD12_RS14880 PF07238 PilZ domain RD12_RS14880 PF07317 Flagellar regulator YcgR RD12_RS14885 PF11769 RD12_RS14885 RD12_RS14895 PF05724 Thiopurine S-methyltransferase (TPMT) RD12_RS14900 PF00005 ABC transporter RD12_RS14900 PF00664 ABC transporter transmembrane region RD12_RS14905 PF00665 Integrase core domain RD12_RS14905 PF13011 RD12_RS14905 RD12_RS14910 PF12805 RD12_RS14910 RD12_RS14915 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS14915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS14915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS14920 PF10369 Small subunit of acetolactate synthase RD12_RS14920 PF13710 ACT domain RD12_RS14925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RD12_RS14925 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain RD12_RS14930 PF01066 CDP-alcohol phosphatidyltransferase RD12_RS14940 PF00312 Ribosomal protein S15 RD12_RS14945 PF00013 KH domain RD12_RS14945 PF00575 S1 RNA binding domain RD12_RS14945 PF01138 3' exoribonuclease family, domain 1 RD12_RS14945 PF03725 3' exoribonuclease family, domain 2 RD12_RS14945 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RD12_RS14955 PF00665 Integrase core domain RD12_RS14955 PF13011 RD12_RS14955 RD12_RS14960 PF00291 Pyridoxal-phosphate dependent enzyme RD12_RS14965 PF13470 RD12_RS14965 RD12_RS14975 PF00107 Zinc-binding dehydrogenase RD12_RS14975 PF08240 Alcohol dehydrogenase GroES-like domain RD12_RS14980 PF00121 Triosephosphate isomerase RD12_RS14985 PF03840 Preprotein translocase SecG subunit RD12_RS14995 PF02028 BCCT family transporter RD12_RS15000 PF01614 Bacterial transcriptional regulator RD12_RS15000 PF09339 IclR helix-turn-helix domain RD12_RS15005 PF05034 Methylaspartate ammonia-lyase N-terminus RD12_RS15005 PF07476 Methylaspartate ammonia-lyase C-terminus RD12_RS15010 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS15015 PF03972 MmgE/PrpD family RD12_RS15025 PF00206 Lyase RD12_RS15025 PF14698 Argininosuccinate lyase C-terminal RD12_RS15030 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS15035 PF01548 RD12_RS15035 RD12_RS15035 PF02371 RD12_RS15035 RD12_RS15040 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS15045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS15045 PF03466 LysR substrate binding domain RD12_RS15050 PF01053 Cys/Met metabolism PLP-dependent enzyme RD12_RS15055 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD12_RS15060 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS15065 PF00581 Rhodanese-like domain RD12_RS15070 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS15075 PF01266 FAD dependent oxidoreductase RD12_RS15080 PF02538 RD12_RS15080 RD12_RS15085 PF01968 Hydantoinase/oxoprolinase RD12_RS15085 PF05378 RD12_RS15085 RD12_RS15090 PF09339 IclR helix-turn-helix domain RD12_RS15095 PF00127 Copper binding proteins, plastocyanin/azurin family RD12_RS15100 PF03551 Transcriptional regulator PadR-like family RD12_RS15105 PF02321 Outer membrane efflux protein RD12_RS15110 PF00873 AcrB/AcrD/AcrF family RD12_RS15115 PF16576 RD12_RS15115 RD12_RS15120 PF01638 HxlR-like helix-turn-helix RD12_RS15120 PF14864 Alkyl sulfatase C-terminal RD12_RS15125 PF00665 Integrase core domain RD12_RS15125 PF13011 RD12_RS15125 RD12_RS15130 PF02028 BCCT family transporter RD12_RS15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS15135 PF03466 LysR substrate binding domain RD12_RS15140 PF00781 Diacylglycerol kinase catalytic domain RD12_RS15145 PF00149 Calcineurin-like phosphoesterase RD12_RS15150 PF01569 PAP2 superfamily RD12_RS15155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD12_RS15160 PF03061 Thioesterase superfamily RD12_RS15165 PF00440 Bacterial regulatory proteins, tetR family RD12_RS15170 PF00665 Integrase core domain RD12_RS15170 PF13011 RD12_RS15170 RD12_RS15175 PF13609 Gram-negative porin RD12_RS15180 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RD12_RS15185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RD12_RS15190 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RD12_RS15195 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RD12_RS15200 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RD12_RS15205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RD12_RS15205 PF10531 SLBB domain RD12_RS15205 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD12_RS15210 PF00384 Molybdopterin oxidoreductase RD12_RS15210 PF01568 Molydopterin dinucleotide binding domain RD12_RS15210 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD12_RS15210 PF13510 2Fe-2S iron-sulfur cluster binding domain RD12_RS15215 PF00146 NADH dehydrogenase RD12_RS15220 PF12838 4Fe-4S dicluster domain RD12_RS15225 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RD12_RS15230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD12_RS15235 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD12_RS15235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD12_RS15240 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD12_RS15245 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RD12_RS15250 PF10993 RD12_RS15250 RD12_RS15255 PF00593 TonB dependent receptor RD12_RS15255 PF07715 TonB-dependent Receptor Plug Domain RD12_RS15260 PF00593 TonB dependent receptor RD12_RS15260 PF07715 TonB-dependent Receptor Plug Domain RD12_RS15265 PF13302 Acetyltransferase (GNAT) domain RD12_RS15270 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS15275 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS15275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS15275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS15280 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS15285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS15285 PF03466 LysR substrate binding domain RD12_RS15290 PF12710 haloacid dehalogenase-like hydrolase RD12_RS15290 PF13284 RD12_RS15290 RD12_RS15295 PF00270 DEAD/DEAH box helicase RD12_RS15295 PF00271 Helicase conserved C-terminal domain RD12_RS15295 PF02559 CarD-like/TRCF domain RD12_RS15295 PF03461 TRCF domain RD12_RS15300 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD12_RS15305 PF02542 YgbB family RD12_RS15310 PF00665 Integrase core domain RD12_RS15310 PF13011 RD12_RS15310 RD12_RS15315 PF00316 Fructose-1-6-bisphosphatase RD12_RS15320 PF01433 Peptidase family M1 RD12_RS15320 PF11940 Domain of unknown function (DUF3458) RD12_RS15325 PF13590 Domain of unknown function (DUF4136) RD12_RS15330 PF00665 Integrase core domain RD12_RS15330 PF13011 RD12_RS15330 RD12_RS15335 PF00924 Mechanosensitive ion channel RD12_RS15340 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS15340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS15340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS15345 PF13468 Glyoxalase-like domain RD12_RS15350 PF09084 NMT1/THI5 like RD12_RS15355 PF00005 ABC transporter RD12_RS15360 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS15365 PF10994 Protein of unknown function (DUF2817) RD12_RS15370 PF00501 AMP-binding enzyme RD12_RS15370 PF13193 AMP-binding enzyme C-terminal domain RD12_RS15375 PF00107 Zinc-binding dehydrogenase RD12_RS15375 PF08240 Alcohol dehydrogenase GroES-like domain RD12_RS15380 PF00392 Bacterial regulatory proteins, gntR family RD12_RS15380 PF07729 FCD domain RD12_RS15385 PF03797 Autotransporter beta-domain RD12_RS15390 PF00392 Bacterial regulatory proteins, gntR family RD12_RS15390 PF07729 FCD domain RD12_RS15395 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS15395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS15395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS15400 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS15405 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS15415 PF01063 Aminotransferase class IV RD12_RS15420 PF00005 ABC transporter RD12_RS15425 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS15435 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS15440 PF03466 LysR substrate binding domain RD12_RS15445 PF02321 Outer membrane efflux protein RD12_RS15450 PF13437 HlyD family secretion protein RD12_RS15450 PF13533 Biotin-lipoyl like RD12_RS15455 PF00005 ABC transporter RD12_RS15455 PF00664 ABC transporter transmembrane region RD12_RS15455 PF03412 Peptidase C39 family RD12_RS15460 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RD12_RS15460 PF02382 RD12_RS15460 RD12_RS15460 PF03497 Anthrax toxin LF subunit RD12_RS15470 PF02794 RD12_RS15470 RD12_RS15475 PF00171 Aldehyde dehydrogenase family RD12_RS15480 PF00665 Integrase core domain RD12_RS15480 PF13011 RD12_RS15480 RD12_RS15485 PF01266 FAD dependent oxidoreductase RD12_RS15490 PF02538 RD12_RS15490 RD12_RS15495 PF01968 Hydantoinase/oxoprolinase RD12_RS15495 PF05378 RD12_RS15495 RD12_RS15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS15500 PF03466 LysR substrate binding domain RD12_RS15510 PF00348 Polyprenyl synthetase RD12_RS15515 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD12_RS15520 PF00829 Ribosomal prokaryotic L21 protein RD12_RS15525 PF01016 Ribosomal L27 protein RD12_RS15530 PF01018 GTP1/OBG RD12_RS15530 PF01926 50S ribosome-binding GTPase RD12_RS15535 PF00696 Amino acid kinase family RD12_RS15535 PF01472 PUA domain RD12_RS15545 PF01381 Helix-turn-helix RD12_RS15550 PF00665 Integrase core domain RD12_RS15550 PF13011 RD12_RS15550 RD12_RS15555 PF00665 Integrase core domain RD12_RS15555 PF13011 RD12_RS15555 RD12_RS15570 PF00665 Integrase core domain RD12_RS15570 PF13011 RD12_RS15570 RD12_RS15580 PF04773 FecR protein RD12_RS15580 PF16220 RD12_RS15580 RD12_RS15585 PF00593 TonB dependent receptor RD12_RS15585 PF07660 Secretin and TonB N terminus short domain RD12_RS15585 PF07715 TonB-dependent Receptor Plug Domain RD12_RS15590 PF04264 YceI-like domain RD12_RS15600 PF00665 Integrase core domain RD12_RS15600 PF13011 RD12_RS15600 RD12_RS15605 PF03435 Saccharopine dehydrogenase RD12_RS15605 PF16653 RD12_RS15605 RD12_RS15610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD12_RS15615 PF00665 Integrase core domain RD12_RS15615 PF13011 RD12_RS15615 RD12_RS15625 PF01614 Bacterial transcriptional regulator RD12_RS15625 PF09339 IclR helix-turn-helix domain RD12_RS15630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS15635 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS15640 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS15645 PF00005 ABC transporter RD12_RS15645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS15650 PF01425 Amidase RD12_RS15655 PF00202 Aminotransferase class-III RD12_RS15660 PF06348 RD12_RS15660 RD12_RS15665 PF13714 Phosphoenolpyruvate phosphomutase RD12_RS15670 PF00665 Integrase core domain RD12_RS15670 PF13011 RD12_RS15670 RD12_RS15675 PF00691 OmpA family RD12_RS15680 PF01329 Pterin 4 alpha carbinolamine dehydratase RD12_RS15690 PF00483 Nucleotidyl transferase RD12_RS15695 PF01636 Phosphotransferase enzyme family RD12_RS15700 PF04453 Organic solvent tolerance protein RD12_RS15705 PF00639 PPIC-type PPIASE domain RD12_RS15705 PF09312 SurA N-terminal domain RD12_RS15705 PF13616 PPIC-type PPIASE domain RD12_RS15710 PF00398 Ribosomal RNA adenine dimethylase RD12_RS15715 PF02595 Glycerate kinase family RD12_RS15720 PF00224 Pyruvate kinase, barrel domain RD12_RS15720 PF02887 Pyruvate kinase, alpha/beta domain RD12_RS15725 PF07670 Nucleoside recognition RD12_RS15730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS15730 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS15730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS15730 PF09317 RD12_RS15730 RD12_RS15735 PF00665 Integrase core domain RD12_RS15735 PF13011 RD12_RS15735 RD12_RS15740 PF01019 Gamma-glutamyltranspeptidase RD12_RS15745 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS15750 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS15755 PF00005 ABC transporter RD12_RS15760 PF01032 FecCD transport family RD12_RS15765 PF13174 Tetratricopeptide repeat RD12_RS15765 PF13432 Tetratricopeptide repeat RD12_RS15770 PF00691 OmpA family RD12_RS15775 PF04052 TolB amino-terminal domain RD12_RS15775 PF07676 WD40-like Beta Propeller Repeat RD12_RS15780 PF13103 TonB C terminal RD12_RS15785 PF02472 Biopolymer transport protein ExbD/TolR RD12_RS15790 PF01618 RD12_RS15790 RD12_RS15795 PF03061 Thioesterase superfamily RD12_RS15800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD12_RS15800 PF03129 Anticodon binding domain RD12_RS15800 PF04073 Aminoacyl-tRNA editing domain RD12_RS15805 PF00293 NUDIX domain RD12_RS15810 PF00072 Response regulator receiver domain RD12_RS15810 PF00486 Transcriptional regulatory protein, C terminal RD12_RS15815 PF08521 RD12_RS15815 RD12_RS15820 PF02586 Uncharacterised ACR, COG2135 RD12_RS15835 PF10721 RD12_RS15835 RD12_RS15845 PF16082 RD12_RS15845 RD12_RS15865 PF09327 RD12_RS15865 RD12_RS15865 PF13550 RD12_RS15865 RD12_RS15870 PF00877 NlpC/P60 family RD12_RS15875 PF08875 RD12_RS15875 RD12_RS15885 PF06791 RD12_RS15885 RD12_RS15885 PF09718 RD12_RS15885 RD12_RS15890 PF08809 RD12_RS15890 RD12_RS15895 PF08748 RD12_RS15895 RD12_RS15900 PF08813 RD12_RS15900 RD12_RS15905 PF13392 HNH endonuclease RD12_RS15910 PF13554 Bacteriophage related domain of unknown function RD12_RS15945 PF00665 Integrase core domain RD12_RS15945 PF13011 RD12_RS15945 RD12_RS15965 PF04233 RD12_RS15965 RD12_RS15970 PF13264 RD12_RS15970 RD12_RS15975 PF03237 Terminase-like family RD12_RS15985 PF00665 Integrase core domain RD12_RS15985 PF13011 RD12_RS15985 RD12_RS16015 PF00665 Integrase core domain RD12_RS16015 PF13011 RD12_RS16015 RD12_RS16025 PF03180 NLPA lipoprotein RD12_RS16030 PF06073 RD12_RS16030 RD12_RS16035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RD12_RS16035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD12_RS16040 PF00005 ABC transporter RD12_RS16045 PF00005 ABC transporter RD12_RS16045 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS16050 PF02653 RD12_RS16050 RD12_RS16055 PF02653 RD12_RS16055 RD12_RS16060 PF13458 Periplasmic binding protein RD12_RS16065 PF01425 Amidase RD12_RS16070 PF00484 Carbonic anhydrase RD12_RS16080 PF00665 Integrase core domain RD12_RS16080 PF13011 RD12_RS16080 RD12_RS16085 PF00270 DEAD/DEAH box helicase RD12_RS16085 PF00271 Helicase conserved C-terminal domain RD12_RS16085 PF00570 HRDC domain RD12_RS16085 PF09382 RQC domain RD12_RS16085 PF16124 RD12_RS16085 RD12_RS16090 PF05491 Holliday junction DNA helicase ruvB C-terminus RD12_RS16090 PF05496 Holliday junction DNA helicase ruvB N-terminus RD12_RS16095 PF00291 Pyridoxal-phosphate dependent enzyme RD12_RS16100 PF01370 NAD dependent epimerase/dehydratase family RD12_RS16105 PF01330 RuvA N terminal domain RD12_RS16105 PF07499 RuvA, C-terminal domain RD12_RS16105 PF14520 Helix-hairpin-helix domain RD12_RS16110 PF02075 Crossover junction endodeoxyribonuclease RuvC RD12_RS16115 PF01808 AICARFT/IMPCHase bienzyme RD12_RS16115 PF02142 MGS-like domain RD12_RS16120 PF02954 Bacterial regulatory protein, Fis family RD12_RS16125 PF01207 Dihydrouridine synthase (Dus) RD12_RS16130 PF01494 FAD binding domain RD12_RS16140 PF00557 Metallopeptidase family M24 RD12_RS16140 PF05195 Aminopeptidase P, N-terminal domain RD12_RS16145 PF01699 Sodium/calcium exchanger protein RD12_RS16155 PF00665 Integrase core domain RD12_RS16155 PF13011 RD12_RS16155 RD12_RS16160 PF00665 Integrase core domain RD12_RS16160 PF13011 RD12_RS16160 RD12_RS16165 PF13609 Gram-negative porin RD12_RS16170 PF09678 RD12_RS16170 RD12_RS16175 PF00483 Nucleotidyl transferase RD12_RS16180 PF01435 Peptidase family M48 RD12_RS16185 PF12146 Putative lysophospholipase RD12_RS16190 PF13474 SnoaL-like domain RD12_RS16195 PF10276 Zinc-finger domain RD12_RS16200 PF01063 Aminotransferase class IV RD12_RS16205 PF03591 RD12_RS16205 RD12_RS16210 PF05437 RD12_RS16210 RD12_RS16215 PF00270 DEAD/DEAH box helicase RD12_RS16215 PF00271 Helicase conserved C-terminal domain RD12_RS16220 PF00085 Thioredoxin RD12_RS16225 PF07264 Etoposide-induced protein 2 RD12_RS16230 PF00665 Integrase core domain RD12_RS16230 PF13011 RD12_RS16230 RD12_RS16235 PF00994 Probable molybdopterin binding domain RD12_RS16240 PF01614 Bacterial transcriptional regulator RD12_RS16240 PF09339 IclR helix-turn-helix domain RD12_RS16245 PF05785 Rho-activating domain of cytotoxic necrotizing factor RD12_RS16250 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS16255 PF09361 RD12_RS16255 RD12_RS16260 PF01180 Dihydroorotate dehydrogenase RD12_RS16265 PF04376 RD12_RS16265 RD12_RS16265 PF04377 RD12_RS16265 RD12_RS16270 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RD12_RS16275 PF00293 NUDIX domain RD12_RS16275 PF14803 Nudix N-terminal RD12_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS16280 PF03466 LysR substrate binding domain RD12_RS16285 PF07681 RD12_RS16285 RD12_RS16290 PF11161 RD12_RS16290 RD12_RS16310 PF01810 RD12_RS16310 RD12_RS16315 PF00665 Integrase core domain RD12_RS16315 PF13011 RD12_RS16315 RD12_RS16320 PF00392 Bacterial regulatory proteins, gntR family RD12_RS16320 PF07729 FCD domain RD12_RS16325 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS16325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS16325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS16330 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS16335 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD12_RS16340 PF00390 Malic enzyme, N-terminal domain RD12_RS16340 PF01515 Phosphate acetyl/butaryl transferase RD12_RS16340 PF03949 Malic enzyme, NAD binding domain RD12_RS16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS16345 PF03466 LysR substrate binding domain RD12_RS16350 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS16355 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS16360 PF00005 ABC transporter RD12_RS16360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS16370 PF07171 MlrC C-terminus RD12_RS16370 PF07364 Protein of unknown function (DUF1485) RD12_RS16375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS16375 PF03466 LysR substrate binding domain RD12_RS16385 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RD12_RS16390 PF12840 Helix-turn-helix domain RD12_RS16395 PF05170 RD12_RS16395 RD12_RS16400 PF03476 MOSC N-terminal beta barrel domain RD12_RS16405 PF03594 RD12_RS16405 RD12_RS16410 PF00037 4Fe-4S binding domain RD12_RS16415 PF01467 Cytidylyltransferase RD12_RS16420 PF03602 Conserved hypothetical protein 95 RD12_RS16425 PF00448 SRP54-type protein, GTPase domain RD12_RS16425 PF02881 SRP54-type protein, helical bundle domain RD12_RS16430 PF05235 CHAD domain RD12_RS16435 PF01928 CYTH domain RD12_RS16440 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS16445 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS16450 PF00005 ABC transporter RD12_RS16455 PF00665 Integrase core domain RD12_RS16455 PF13011 RD12_RS16455 RD12_RS16460 PF00005 ABC transporter RD12_RS16465 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RD12_RS16470 PF01614 Bacterial transcriptional regulator RD12_RS16470 PF09339 IclR helix-turn-helix domain RD12_RS16475 PF08282 haloacid dehalogenase-like hydrolase RD12_RS16480 PF00925 GTP cyclohydrolase II RD12_RS16480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD12_RS16485 PF00885 6,7-dimethyl-8-ribityllumazine synthase RD12_RS16490 PF01029 NusB family RD12_RS16495 PF00586 AIR synthase related protein, N-terminal domain RD12_RS16495 PF02769 AIR synthase related protein, C-terminal domain RD12_RS16500 PF04608 Phosphatidylglycerophosphatase A RD12_RS16505 PF02464 Competence-damaged protein RD12_RS16510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RD12_RS16515 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS16520 PF01219 Prokaryotic diacylglycerol kinase RD12_RS16525 PF03631 RD12_RS16525 RD12_RS16530 PF03212 Pertactin RD12_RS16530 PF03797 Autotransporter beta-domain RD12_RS16535 PF00118 TCP-1/cpn60 chaperonin family RD12_RS16540 PF00166 Chaperonin 10 Kd subunit RD12_RS16560 PF00890 FAD binding domain RD12_RS16565 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS16570 PF03466 LysR substrate binding domain RD12_RS16575 PF00890 FAD binding domain RD12_RS16580 PF00665 Integrase core domain RD12_RS16580 PF13011 RD12_RS16580 RD12_RS16585 PF00665 Integrase core domain RD12_RS16585 PF13011 RD12_RS16585 RD12_RS16590 PF00857 Isochorismatase family RD12_RS16595 PF00990 GGDEF domain RD12_RS16595 PF11563 Protoglobin RD12_RS16600 PF01966 HD domain RD12_RS16630 PF03781 Sulfatase-modifying factor enzyme 1 RD12_RS16630 PF12867 DinB superfamily RD12_RS16635 PF10017 RD12_RS16635 RD12_RS16645 PF13091 PLD-like domain RD12_RS16650 PF00665 Integrase core domain RD12_RS16650 PF13011 RD12_RS16650 RD12_RS16655 PF01645 Conserved region in glutamate synthase RD12_RS16660 PF04143 RD12_RS16660 RD12_RS16665 PF03547 RD12_RS16665 RD12_RS16670 PF13673 Acetyltransferase (GNAT) domain RD12_RS16680 PF03942 RD12_RS16680 RD12_RS16690 PF00575 S1 RNA binding domain RD12_RS16690 PF00773 RNB domain RD12_RS16690 PF08206 Ribonuclease B OB domain RD12_RS16695 PF00588 SpoU rRNA Methylase family RD12_RS16695 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD12_RS16700 PF01053 Cys/Met metabolism PLP-dependent enzyme RD12_RS16705 PF13640 2OG-Fe(II) oxygenase superfamily RD12_RS16710 PF00216 Bacterial DNA-binding protein RD12_RS16720 PF03544 Gram-negative bacterial TonB protein C-terminal RD12_RS16725 PF01618 RD12_RS16725 RD12_RS16730 PF02472 Biopolymer transport protein ExbD/TolR RD12_RS16735 PF00072 Response regulator receiver domain RD12_RS16735 PF00486 Transcriptional regulatory protein, C terminal RD12_RS16740 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS16745 PF02705 RD12_RS16745 RD12_RS16750 PF00764 Arginosuccinate synthase RD12_RS16755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD12_RS16755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD12_RS16760 PF00202 Aminotransferase class-III RD12_RS16765 PF12112 Protein of unknown function (DUF3579) RD12_RS16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS16770 PF03466 LysR substrate binding domain RD12_RS16775 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS16780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD12_RS16780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD12_RS16785 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS16800 PF00392 Bacterial regulatory proteins, gntR family RD12_RS16800 PF07729 FCD domain RD12_RS16805 PF00665 Integrase core domain RD12_RS16805 PF13011 RD12_RS16805 RD12_RS16810 PF07690 Major Facilitator Superfamily RD12_RS16815 PF02311 AraC-like ligand binding domain RD12_RS16815 PF12833 Helix-turn-helix domain RD12_RS16820 PF02627 Carboxymuconolactone decarboxylase family RD12_RS16825 PF00578 AhpC/TSA family RD12_RS16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS16840 PF00072 Response regulator receiver domain RD12_RS16840 PF00486 Transcriptional regulatory protein, C terminal RD12_RS16845 PF00814 Glycoprotease family RD12_RS16845 PF13673 Acetyltransferase (GNAT) domain RD12_RS16850 PF03167 Uracil DNA glycosylase superfamily RD12_RS16855 PF07690 Major Facilitator Superfamily RD12_RS16860 PF02463 RecF/RecN/SMC N terminal domain RD12_RS16860 PF06470 SMC proteins Flexible Hinge Domain RD12_RS16865 PF04354 ZipA, C-terminal FtsZ-binding domain RD12_RS16870 PF00533 BRCA1 C Terminus (BRCT) domain RD12_RS16870 PF01653 NAD-dependent DNA ligase adenylation domain RD12_RS16870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RD12_RS16870 PF03120 NAD-dependent DNA ligase OB-fold domain RD12_RS16870 PF12826 Helix-hairpin-helix motif RD12_RS16870 PF14520 Helix-hairpin-helix domain RD12_RS16875 PF13616 PPIC-type PPIASE domain RD12_RS16875 PF13624 SurA N-terminal domain RD12_RS16880 PF01722 BolA-like protein RD12_RS16885 PF04279 RD12_RS16885 RD12_RS16890 PF01641 SelR domain RD12_RS16895 PF00005 ABC transporter RD12_RS16900 PF02361 Cobalt transport protein RD12_RS16905 PF02632 BioY family RD12_RS16910 PF13458 Periplasmic binding protein RD12_RS16915 PF02653 RD12_RS16915 RD12_RS16920 PF00005 ABC transporter RD12_RS16920 PF02653 RD12_RS16920 RD12_RS16925 PF01063 Aminotransferase class IV RD12_RS16930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RD12_RS16935 PF02653 RD12_RS16935 RD12_RS16940 PF02653 RD12_RS16940 RD12_RS16945 PF13458 Periplasmic binding protein RD12_RS16950 PF00005 ABC transporter RD12_RS16955 PF00005 ABC transporter RD12_RS16955 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS16960 PF00633 Helix-hairpin-helix motif RD12_RS16960 PF00730 HhH-GPD superfamily base excision DNA repair protein RD12_RS16960 PF10576 Iron-sulfur binding domain of endonuclease III RD12_RS16965 PF04060 Putative Fe-S cluster RD12_RS16965 PF14697 4Fe-4S dicluster domain RD12_RS16970 PF06850 RD12_RS16970 RD12_RS16975 PF00175 Oxidoreductase NAD-binding domain RD12_RS16980 PF00037 4Fe-4S binding domain RD12_RS16980 PF11953 Domain of unknown function (DUF3470) RD12_RS16985 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RD12_RS16990 PF01042 Endoribonuclease L-PSP RD12_RS16995 PF03358 NADPH-dependent FMN reductase RD12_RS17000 PF06167 Glucose-regulated metallo-peptidase M90 RD12_RS17005 PF02824 TGS domain RD12_RS17005 PF04607 Region found in RelA / SpoT proteins RD12_RS17005 PF13291 ACT domain RD12_RS17005 PF13328 HD domain RD12_RS17010 PF01546 Peptidase family M20/M25/M40 RD12_RS17010 PF07687 Peptidase dimerisation domain RD12_RS17015 PF00291 Pyridoxal-phosphate dependent enzyme RD12_RS17020 PF00290 Tryptophan synthase alpha chain RD12_RS17025 PF01039 Carboxyl transferase domain RD12_RS17035 PF00665 Integrase core domain RD12_RS17035 PF13011 RD12_RS17035 RD12_RS17040 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RD12_RS17045 PF00575 S1 RNA binding domain RD12_RS17045 PF10150 Ribonuclease E/G family RD12_RS17050 PF00849 RNA pseudouridylate synthase RD12_RS17050 PF01479 S4 domain RD12_RS17055 PF13419 Haloacid dehalogenase-like hydrolase RD12_RS17060 PF00174 Oxidoreductase molybdopterin binding domain RD12_RS17065 PF01794 RD12_RS17065 RD12_RS17070 PF00665 Integrase core domain RD12_RS17070 PF13011 RD12_RS17070 RD12_RS17075 PF02515 CoA-transferase family III RD12_RS17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS17080 PF03466 LysR substrate binding domain RD12_RS17085 PF01575 MaoC like domain RD12_RS17090 PF02515 CoA-transferase family III RD12_RS17105 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS17110 PF03466 LysR substrate binding domain RD12_RS17115 PF01042 Endoribonuclease L-PSP RD12_RS17120 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS17120 PF00175 Oxidoreductase NAD-binding domain RD12_RS17120 PF00384 Molybdopterin oxidoreductase RD12_RS17120 PF00970 Oxidoreductase FAD-binding domain RD12_RS17120 PF01568 Molydopterin dinucleotide binding domain RD12_RS17120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD12_RS17125 PF02667 RD12_RS17125 RD12_RS17130 PF00171 Aldehyde dehydrogenase family RD12_RS17135 PF00392 Bacterial regulatory proteins, gntR family RD12_RS17135 PF07729 FCD domain RD12_RS17145 PF00313 'Cold-shock' DNA-binding domain RD12_RS17150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS17150 PF03466 LysR substrate binding domain RD12_RS17155 PF00665 Integrase core domain RD12_RS17155 PF13011 RD12_RS17155 RD12_RS17160 PF00665 Integrase core domain RD12_RS17160 PF13011 RD12_RS17160 RD12_RS17170 PF00108 Thiolase, N-terminal domain RD12_RS17170 PF02803 Thiolase, C-terminal domain RD12_RS17175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS17180 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS17180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS17185 PF03466 LysR substrate binding domain RD12_RS17190 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17195 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS17200 PF02515 CoA-transferase family III RD12_RS17205 PF03741 RD12_RS17205 RD12_RS17210 PF02308 RD12_RS17210 RD12_RS17215 PF00009 Elongation factor Tu GTP binding domain RD12_RS17215 PF00679 Elongation factor G C-terminus RD12_RS17215 PF03144 Elongation factor Tu domain 2 RD12_RS17215 PF03764 Elongation factor G, domain IV RD12_RS17215 PF14492 Elongation Factor G, domain II RD12_RS17220 PF00155 Aminotransferase class I and II RD12_RS17220 PF00392 Bacterial regulatory proteins, gntR family RD12_RS17225 PF04273 Putative phosphatase (DUF442) RD12_RS17230 PF00582 Universal stress protein family RD12_RS17235 PF00009 Elongation factor Tu GTP binding domain RD12_RS17240 PF00665 Integrase core domain RD12_RS17240 PF13011 RD12_RS17240 RD12_RS17245 PF00701 Dihydrodipicolinate synthetase family RD12_RS17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS17250 PF03466 LysR substrate binding domain RD12_RS17255 PF02515 CoA-transferase family III RD12_RS17260 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS17265 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS17265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS17270 PF01575 MaoC like domain RD12_RS17280 PF01796 RD12_RS17280 RD12_RS17280 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) RD12_RS17285 PF00108 Thiolase, N-terminal domain RD12_RS17290 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS17295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS17295 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS17295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS17300 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17305 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS17305 PF13380 CoA binding domain RD12_RS17305 PF13549 ATP-grasp domain RD12_RS17305 PF13607 Succinyl-CoA ligase like flavodoxin domain RD12_RS17310 PF01614 Bacterial transcriptional regulator RD12_RS17310 PF09339 IclR helix-turn-helix domain RD12_RS17315 PF00676 Dehydrogenase E1 component RD12_RS17320 PF02779 Transketolase, pyrimidine binding domain RD12_RS17320 PF02780 Transketolase, C-terminal domain RD12_RS17325 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS17330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD12_RS17330 PF00364 Biotin-requiring enzyme RD12_RS17335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS17335 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS17335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS17340 PF00501 AMP-binding enzyme RD12_RS17340 PF13193 AMP-binding enzyme C-terminal domain RD12_RS17345 PF03972 MmgE/PrpD family RD12_RS17350 PF13458 Periplasmic binding protein RD12_RS17355 PF02653 RD12_RS17355 RD12_RS17360 PF00005 ABC transporter RD12_RS17360 PF02653 RD12_RS17360 RD12_RS17365 PF00005 ABC transporter RD12_RS17370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD12_RS17370 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS17375 PF00440 Bacterial regulatory proteins, tetR family RD12_RS17380 PF04909 Amidohydrolase RD12_RS17385 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17395 PF01614 Bacterial transcriptional regulator RD12_RS17395 PF09339 IclR helix-turn-helix domain RD12_RS17400 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17405 PF00665 Integrase core domain RD12_RS17405 PF13011 RD12_RS17405 RD12_RS17410 PF00899 ThiF family RD12_RS17415 PF00595 PDZ domain (Also known as DHR or GLGF) RD12_RS17415 PF03572 Peptidase family S41 RD12_RS17420 PF01551 Peptidase family M23 RD12_RS17425 PF00300 Histidine phosphatase superfamily (branch 1) RD12_RS17430 PF00581 Rhodanese-like domain RD12_RS17435 PF00462 Glutaredoxin RD12_RS17440 PF02556 Preprotein translocase subunit SecB RD12_RS17445 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RD12_RS17445 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RD12_RS17450 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17455 PF00588 SpoU rRNA Methylase family RD12_RS17460 PF00156 Phosphoribosyl transferase domain RD12_RS17465 PF08241 Methyltransferase domain RD12_RS17470 PF04107 Glutamate-cysteine ligase family 2(GCS2) RD12_RS17475 PF06808 RD12_RS17475 RD12_RS17480 PF04290 RD12_RS17480 RD12_RS17485 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS17490 PF00005 ABC transporter RD12_RS17495 PF09084 NMT1/THI5 like RD12_RS17500 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS17500 PF01799 [2Fe-2S] binding domain RD12_RS17500 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) RD12_RS17505 PF00941 FAD binding domain in molybdopterin dehydrogenase RD12_RS17510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD12_RS17510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD12_RS17515 PF03480 Bacterial extracellular solute-binding protein, family 7 RD12_RS17520 PF00355 Rieske [2Fe-2S] domain RD12_RS17525 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS17525 PF14759 Reductase C-terminal RD12_RS17530 PF00355 Rieske [2Fe-2S] domain RD12_RS17530 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD12_RS17535 PF00866 Ring hydroxylating beta subunit RD12_RS17540 PF00857 Isochorismatase family RD12_RS17550 PF00561 alpha/beta hydrolase fold RD12_RS17560 PF04909 Amidohydrolase RD12_RS17565 PF12804 MobA-like NTP transferase domain RD12_RS17570 PF02625 XdhC and CoxI family RD12_RS17570 PF13478 XdhC Rossmann domain RD12_RS17575 PF01047 MarR family RD12_RS17580 PF02386 Cation transport protein RD12_RS17585 PF02080 TrkA-C domain RD12_RS17585 PF02254 TrkA-N domain RD12_RS17590 PF00072 Response regulator receiver domain RD12_RS17595 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS17595 PF00672 HAMP domain RD12_RS17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS17595 PF08448 PAS fold RD12_RS17600 PF14334 RD12_RS17600 RD12_RS17605 PF01189 NOL1/NOP2/sun family RD12_RS17610 PF01810 RD12_RS17610 RD12_RS17615 PF01958 Domain of unknown function DUF108 RD12_RS17615 PF03447 Homoserine dehydrogenase, NAD binding domain RD12_RS17620 PF13468 Glyoxalase-like domain RD12_RS17625 PF00665 Integrase core domain RD12_RS17625 PF13011 RD12_RS17625 RD12_RS17630 PF00665 Integrase core domain RD12_RS17630 PF13011 RD12_RS17630 RD12_RS17635 PF01810 RD12_RS17635 RD12_RS17640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS17640 PF03466 LysR substrate binding domain RD12_RS17645 PF04314 Protein of unknown function (DUF461) RD12_RS17650 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17660 PF00155 Aminotransferase class I and II RD12_RS17665 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS17675 PF00682 HMGL-like RD12_RS17680 PF02481 DNA recombination-mediator protein A RD12_RS17685 PF01037 AsnC family RD12_RS17685 PF13412 Winged helix-turn-helix DNA-binding RD12_RS17690 PF00266 Aminotransferase class-V RD12_RS17695 PF01327 Polypeptide deformylase RD12_RS17700 PF00665 Integrase core domain RD12_RS17700 PF13011 RD12_RS17700 RD12_RS17705 PF00551 Formyl transferase RD12_RS17705 PF02911 Formyl transferase, C-terminal domain RD12_RS17710 PF01243 Pyridoxamine 5'-phosphate oxidase RD12_RS17715 PF13419 Haloacid dehalogenase-like hydrolase RD12_RS17725 PF03641 Possible lysine decarboxylase RD12_RS17730 PF00210 Ferritin-like domain RD12_RS17735 PF00919 Uncharacterized protein family UPF0004 RD12_RS17735 PF04055 Radical SAM superfamily RD12_RS17740 PF01361 Tautomerase enzyme RD12_RS17745 PF01266 FAD dependent oxidoreductase RD12_RS17750 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17755 PF00392 Bacterial regulatory proteins, gntR family RD12_RS17755 PF07729 FCD domain RD12_RS17760 PF00665 Integrase core domain RD12_RS17760 PF13011 RD12_RS17760 RD12_RS17765 PF00202 Aminotransferase class-III RD12_RS17770 PF00491 Arginase family RD12_RS17775 PF00665 Integrase core domain RD12_RS17775 PF13011 RD12_RS17775 RD12_RS17780 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17785 PF02627 Carboxymuconolactone decarboxylase family RD12_RS17790 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS17795 PF01614 Bacterial transcriptional regulator RD12_RS17795 PF09339 IclR helix-turn-helix domain RD12_RS17800 PF00501 AMP-binding enzyme RD12_RS17800 PF13193 AMP-binding enzyme C-terminal domain RD12_RS17805 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS17810 PF04115 Ureidoglycolate hydrolase RD12_RS17815 PF03797 Autotransporter beta-domain RD12_RS17815 PF12951 RD12_RS17815 RD12_RS17820 PF08085 RD12_RS17820 RD12_RS17830 PF12167 RD12_RS17830 RD12_RS17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS17835 PF03466 LysR substrate binding domain RD12_RS17840 PF13419 Haloacid dehalogenase-like hydrolase RD12_RS17845 PF01168 Alanine racemase, N-terminal domain RD12_RS17845 PF14031 Putative serine dehydratase domain RD12_RS17850 PF07411 Domain of unknown function (DUF1508) RD12_RS17855 PF01145 SPFH domain / Band 7 family RD12_RS17860 PF14497 Glutathione S-transferase, C-terminal domain RD12_RS17865 PF01042 Endoribonuclease L-PSP RD12_RS17870 PF00665 Integrase core domain RD12_RS17870 PF13011 RD12_RS17870 RD12_RS17885 PF00665 Integrase core domain RD12_RS17885 PF13011 RD12_RS17885 RD12_RS17910 PF03837 RD12_RS17910 RD12_RS17915 PF09588 YqaJ-like viral recombinase domain RD12_RS17940 PF12728 Helix-turn-helix domain RD12_RS17945 PF00589 Phage integrase family RD12_RS17950 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS17950 PF08521 RD12_RS17950 RD12_RS17955 PF11516 Protein of unknown function (DUF3120) RD12_RS17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS17965 PF03466 LysR substrate binding domain RD12_RS17970 PF02525 Flavodoxin-like fold RD12_RS17975 PF00665 Integrase core domain RD12_RS17975 PF13011 RD12_RS17975 RD12_RS17980 PF02096 60Kd inner membrane protein RD12_RS17980 PF14849 YidC periplasmic domain RD12_RS17985 PF01809 RD12_RS17985 RD12_RS17990 PF00825 Ribonuclease P RD12_RS17995 PF00468 Ribosomal protein L34 RD12_RS18000 PF00308 Bacterial dnaA protein RD12_RS18000 PF08299 Bacterial dnaA protein helix-turn-helix RD12_RS18000 PF11638 DnaA N-terminal domain RD12_RS18005 PF00712 DNA polymerase III beta subunit, N-terminal domain RD12_RS18005 PF02767 DNA polymerase III beta subunit, central domain RD12_RS18005 PF02768 DNA polymerase III beta subunit, C-terminal domain RD12_RS18010 PF00204 DNA gyrase B RD12_RS18010 PF00986 DNA gyrase B subunit, carboxyl terminus RD12_RS18010 PF01751 Toprim domain RD12_RS18010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS18015 PF01614 Bacterial transcriptional regulator RD12_RS18015 PF09339 IclR helix-turn-helix domain RD12_RS18020 PF01425 Amidase RD12_RS18025 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS18035 PF01070 FMN-dependent dehydrogenase RD12_RS18040 PF06445 GyrI-like small molecule binding domain RD12_RS18040 PF12833 Helix-turn-helix domain RD12_RS18050 PF00665 Integrase core domain RD12_RS18050 PF13011 RD12_RS18050 RD12_RS18055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD12_RS18060 PF13411 MerR HTH family regulatory protein RD12_RS18065 PF00753 Metallo-beta-lactamase superfamily RD12_RS18070 PF00665 Integrase core domain RD12_RS18070 PF13011 RD12_RS18070 RD12_RS18075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD12_RS18075 PF02770 Acyl-CoA dehydrogenase, middle domain RD12_RS18085 PF00108 Thiolase, N-terminal domain RD12_RS18085 PF02803 Thiolase, C-terminal domain RD12_RS18090 PF01039 Carboxyl transferase domain RD12_RS18095 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RD12_RS18095 PF00364 Biotin-requiring enzyme RD12_RS18095 PF02785 Biotin carboxylase C-terminal domain RD12_RS18095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD12_RS18100 PF07866 Protein of unknown function (DUF1653) RD12_RS18105 PF00202 Aminotransferase class-III RD12_RS18110 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS18115 PF01168 Alanine racemase, N-terminal domain RD12_RS18115 PF14031 Putative serine dehydratase domain RD12_RS18120 PF16868 RD12_RS18120 RD12_RS18125 PF06808 RD12_RS18125 RD12_RS18130 PF00593 TonB dependent receptor RD12_RS18130 PF07715 TonB-dependent Receptor Plug Domain RD12_RS18135 PF04361 RD12_RS18135 RD12_RS18145 PF09925 RD12_RS18145 RD12_RS18145 PF14345 RD12_RS18145 RD12_RS18145 PF14351 RD12_RS18145 RD12_RS18150 PF01131 DNA topoisomerase RD12_RS18150 PF01751 Toprim domain RD12_RS18150 PF13342 RD12_RS18150 RD12_RS18155 PF09084 NMT1/THI5 like RD12_RS18160 PF00005 ABC transporter RD12_RS18165 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS18170 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS18175 PF00171 Aldehyde dehydrogenase family RD12_RS18180 PF13561 Enoyl-(Acyl carrier protein) reductase RD12_RS18185 PF00205 Thiamine pyrophosphate enzyme, central domain RD12_RS18185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS18185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD12_RS18190 PF01037 AsnC family RD12_RS18190 PF13404 AsnC-type helix-turn-helix domain RD12_RS18195 PF01062 RD12_RS18195 RD12_RS18200 PF00856 SET domain RD12_RS18205 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD12_RS18215 PF00665 Integrase core domain RD12_RS18215 PF13011 RD12_RS18215 RD12_RS18220 PF00809 Pterin binding enzyme RD12_RS18220 PF02310 B12 binding domain RD12_RS18220 PF02574 Homocysteine S-methyltransferase RD12_RS18220 PF02607 B12 binding domain RD12_RS18220 PF02965 Vitamin B12 dependent methionine synthase, activation domain RD12_RS18225 PF00593 TonB dependent receptor RD12_RS18225 PF07715 TonB-dependent Receptor Plug Domain RD12_RS18230 PF01497 Periplasmic binding protein RD12_RS18235 PF05690 Thiazole biosynthesis protein ThiG RD12_RS18240 PF08543 Phosphomethylpyrimidine kinase RD12_RS18245 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RD12_RS18250 PF02321 Outer membrane efflux protein RD12_RS18255 PF02321 Outer membrane efflux protein RD12_RS18260 PF01467 Cytidylyltransferase RD12_RS18265 PF01548 RD12_RS18265 RD12_RS18265 PF02371 RD12_RS18265 RD12_RS18270 PF01594 RD12_RS18270 RD12_RS18275 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RD12_RS18280 PF02254 TrkA-N domain RD12_RS18280 PF07885 Ion channel RD12_RS18285 PF00665 Integrase core domain RD12_RS18285 PF13011 RD12_RS18285 RD12_RS18290 PF00164 Ribosomal protein S12/S23 RD12_RS18295 PF00177 Ribosomal protein S7p/S5e RD12_RS18300 PF00009 Elongation factor Tu GTP binding domain RD12_RS18300 PF00679 Elongation factor G C-terminus RD12_RS18300 PF03144 Elongation factor Tu domain 2 RD12_RS18300 PF03764 Elongation factor G, domain IV RD12_RS18300 PF14492 Elongation Factor G, domain II RD12_RS18305 PF00009 Elongation factor Tu GTP binding domain RD12_RS18305 PF03143 Elongation factor Tu C-terminal domain RD12_RS18305 PF03144 Elongation factor Tu domain 2 RD12_RS18310 PF00338 Ribosomal protein S10p/S20e RD12_RS18315 PF00297 Ribosomal protein L3 RD12_RS18320 PF00573 Ribosomal protein L4/L1 family RD12_RS18325 PF00276 Ribosomal protein L23 RD12_RS18330 PF00181 Ribosomal Proteins L2, RNA binding domain RD12_RS18330 PF03947 Ribosomal Proteins L2, C-terminal domain RD12_RS18335 PF00203 Ribosomal protein S19 RD12_RS18340 PF00237 Ribosomal protein L22p/L17e RD12_RS18345 PF00189 Ribosomal protein S3, C-terminal domain RD12_RS18345 PF07650 KH domain RD12_RS18350 PF00252 Ribosomal protein L16p/L10e RD12_RS18355 PF00831 Ribosomal L29 protein RD12_RS18360 PF00366 Ribosomal protein S17 RD12_RS18365 PF00561 alpha/beta hydrolase fold RD12_RS18370 PF00171 Aldehyde dehydrogenase family RD12_RS18380 PF00238 Ribosomal protein L14p/L23e RD12_RS18385 PF17136 RD12_RS18385 RD12_RS18390 PF00281 Ribosomal protein L5 RD12_RS18390 PF00673 ribosomal L5P family C-terminus RD12_RS18395 PF00253 Ribosomal protein S14p/S29e RD12_RS18400 PF00410 Ribosomal protein S8 RD12_RS18405 PF00347 Ribosomal protein L6 RD12_RS18410 PF00861 Ribosomal L18p/L5e family RD12_RS18415 PF00333 Ribosomal protein S5, N-terminal domain RD12_RS18415 PF03719 Ribosomal protein S5, C-terminal domain RD12_RS18420 PF00327 Ribosomal protein L30p/L7e RD12_RS18425 PF00828 Ribosomal protein L18e/L15 RD12_RS18430 PF00344 SecY translocase RD12_RS18435 PF01176 Translation initiation factor 1A / IF-1 RD12_RS18440 PF00444 Ribosomal protein L36 RD12_RS18445 PF00416 Ribosomal protein S13/S18 RD12_RS18450 PF00411 Ribosomal protein S11 RD12_RS18455 PF00163 Ribosomal protein S4/S9 N-terminal domain RD12_RS18455 PF01479 S4 domain RD12_RS18460 PF01000 RNA polymerase Rpb3/RpoA insert domain RD12_RS18460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RD12_RS18460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RD12_RS18465 PF01196 Ribosomal protein L17 RD12_RS18475 PF03091 CutA1 divalent ion tolerance protein RD12_RS18480 PF02683 RD12_RS18480 RD12_RS18480 PF11412 Disulphide bond corrector protein DsbC RD12_RS18480 PF13899 Thioredoxin-like RD12_RS18485 PF00892 EamA-like transporter family RD12_RS18490 PF00490 Delta-aminolevulinic acid dehydratase RD12_RS18495 PF01926 50S ribosome-binding GTPase RD12_RS18500 PF00034 Cytochrome c RD12_RS18505 PF05140 RD12_RS18505 RD12_RS18510 PF01578 RD12_RS18510 RD12_RS18515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD12_RS18515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RD12_RS18520 PF01491 Frataxin-like domain RD12_RS18525 PF00905 Penicillin binding protein transpeptidase domain RD12_RS18525 PF00912 Transglycosylase RD12_RS18525 PF17092 RD12_RS18525 RD12_RS18530 PF01202 Shikimate kinase RD12_RS18535 PF01761 3-dehydroquinate synthase RD12_RS18540 PF01966 HD domain RD12_RS18540 PF13286 Phosphohydrolase-associated domain RD12_RS18545 PF13410 Glutathione S-transferase, C-terminal domain RD12_RS18545 PF13417 Glutathione S-transferase, N-terminal domain RD12_RS18555 PF07690 Major Facilitator Superfamily RD12_RS18560 PF00436 Single-strand binding protein family RD12_RS18565 PF00593 TonB dependent receptor RD12_RS18565 PF07715 TonB-dependent Receptor Plug Domain RD12_RS18570 PF12973 ChrR Cupin-like domain RD12_RS18575 PF03328 HpcH/HpaI aldolase/citrate lyase family RD12_RS18580 PF03328 HpcH/HpaI aldolase/citrate lyase family RD12_RS18585 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS18590 PF00392 Bacterial regulatory proteins, gntR family RD12_RS18590 PF07702 UTRA domain RD12_RS18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS18595 PF03466 LysR substrate binding domain RD12_RS18600 PF01979 Amidohydrolase family RD12_RS18605 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS18610 PF00534 Glycosyl transferases group 1 RD12_RS18610 PF13439 Glycosyltransferase Family 4 RD12_RS18615 PF10707 RD12_RS18615 RD12_RS18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS18620 PF03466 LysR substrate binding domain RD12_RS18625 PF09084 NMT1/THI5 like RD12_RS18630 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS18635 PF00005 ABC transporter RD12_RS18640 PF01266 FAD dependent oxidoreductase RD12_RS18650 PF00440 Bacterial regulatory proteins, tetR family RD12_RS18655 PF01274 Malate synthase RD12_RS18660 PF00392 Bacterial regulatory proteins, gntR family RD12_RS18660 PF07729 FCD domain RD12_RS18665 PF03435 Saccharopine dehydrogenase RD12_RS18665 PF16653 RD12_RS18665 RD12_RS18670 PF13663 RD12_RS18670 RD12_RS18675 PF01040 UbiA prenyltransferase family RD12_RS18680 PF00155 Aminotransferase class I and II RD12_RS18685 PF13185 GAF domain RD12_RS18690 PF00701 Dihydrodipicolinate synthetase family RD12_RS18695 PF00665 Integrase core domain RD12_RS18695 PF13011 RD12_RS18695 RD12_RS18700 PF01476 LysM domain RD12_RS18700 PF04972 BON domain RD12_RS18705 PF02597 ThiS family RD12_RS18710 PF00561 alpha/beta hydrolase fold RD12_RS18715 PF02390 Putative methyltransferase RD12_RS18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS18720 PF03466 LysR substrate binding domain RD12_RS18730 PF00682 HMGL-like RD12_RS18735 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS18745 PF00665 Integrase core domain RD12_RS18745 PF13011 RD12_RS18745 RD12_RS18750 PF00392 Bacterial regulatory proteins, gntR family RD12_RS18755 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS18760 PF09084 NMT1/THI5 like RD12_RS18765 PF00392 Bacterial regulatory proteins, gntR family RD12_RS18765 PF07702 UTRA domain RD12_RS18770 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS18775 PF09084 NMT1/THI5 like RD12_RS18780 PF00005 ABC transporter RD12_RS18785 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS18790 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS18795 PF00107 Zinc-binding dehydrogenase RD12_RS18795 PF08240 Alcohol dehydrogenase GroES-like domain RD12_RS18800 PF02515 CoA-transferase family III RD12_RS18805 PF00440 Bacterial regulatory proteins, tetR family RD12_RS18810 PF00293 NUDIX domain RD12_RS18810 PF09297 NADH pyrophosphatase zinc ribbon domain RD12_RS18815 PF00111 2Fe-2S iron-sulfur cluster binding domain RD12_RS18815 PF00175 Oxidoreductase NAD-binding domain RD12_RS18815 PF00970 Oxidoreductase FAD-binding domain RD12_RS18820 PF01425 Amidase RD12_RS18830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD12_RS18830 PF03466 LysR substrate binding domain RD12_RS18835 PF13458 Periplasmic binding protein RD12_RS18840 PF06545 Protein of unknown function (DUF1116) RD12_RS18845 PF00005 ABC transporter RD12_RS18845 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD12_RS18850 PF02653 RD12_RS18850 RD12_RS18855 PF02653 RD12_RS18855 RD12_RS18865 PF00355 Rieske [2Fe-2S] domain RD12_RS18880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RD12_RS18880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RD12_RS18885 PF00665 Integrase core domain RD12_RS18885 PF13011 RD12_RS18885 RD12_RS18890 PF00534 Glycosyl transferases group 1 RD12_RS18890 PF13439 Glycosyltransferase Family 4 RD12_RS18895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD12_RS18895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD12_RS18895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD12_RS18900 PF07690 Major Facilitator Superfamily RD12_RS18905 PF00132 Bacterial transferase hexapeptide (six repeats) RD12_RS18905 PF12804 MobA-like NTP transferase domain RD12_RS18915 PF05433 RD12_RS18915 RD12_RS18920 PF12512 RD12_RS18920 RD12_RS18925 PF02630 SCO1/SenC RD12_RS18930 PF01040 UbiA prenyltransferase family RD12_RS18935 PF02628 RD12_RS18935 RD12_RS18945 PF02104 RD12_RS18945 RD12_RS18950 PF11137 RD12_RS18950 RD12_RS18955 PF00510 Cytochrome c oxidase subunit III RD12_RS18960 PF11174 RD12_RS18960 RD12_RS18970 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD12_RS18975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD12_RS18975 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RD12_RS18975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD12_RS18980 PF00293 NUDIX domain RD12_RS18985 PF00027 Cyclic nucleotide-binding domain RD12_RS18985 PF00999 Sodium/hydrogen exchanger family RD12_RS18990 PF00149 Calcineurin-like phosphoesterase RD12_RS18995 PF00140 Sigma-70 factor, region 1 RD12_RS18995 PF04542 Sigma-70 region 2 RD12_RS18995 PF04545 Sigma-70, region 4 RD12_RS19005 PF00756 Putative esterase RD12_RS19010 PF00107 Zinc-binding dehydrogenase RD12_RS19010 PF08240 Alcohol dehydrogenase GroES-like domain RD12_RS19020 PF00310 Glutamine amidotransferases class-II RD12_RS19020 PF01493 GXGXG motif RD12_RS19020 PF01645 Conserved region in glutamate synthase RD12_RS19020 PF04898 Glutamate synthase central domain RD12_RS19025 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD12_RS19025 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD12_RS19030 PF03922 OmpW family RD12_RS19035 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS19040 PF00005 ABC transporter RD12_RS19045 PF02405 RD12_RS19045 RD12_RS19050 PF02470 RD12_RS19050 RD12_RS19055 PF04333 RD12_RS19055 RD12_RS19060 PF05494 Toluene tolerance, Ttg2 RD12_RS19065 PF00005 ABC transporter RD12_RS19070 PF01061 RD12_RS19070 RD12_RS19075 PF01722 BolA-like protein RD12_RS19080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD12_RS19085 PF01634 ATP phosphoribosyltransferase RD12_RS19090 PF00815 Histidinol dehydrogenase RD12_RS19095 PF00155 Aminotransferase class I and II RD12_RS19100 PF00475 Imidazoleglycerol-phosphate dehydratase RD12_RS19105 PF00117 Glutamine amidotransferase class-I RD12_RS19110 PF00977 Histidine biosynthesis protein RD12_RS19115 PF00977 Histidine biosynthesis protein RD12_RS19120 PF01502 Phosphoribosyl-AMP cyclohydrolase RD12_RS19125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RD12_RS19130 PF01230 HIT domain RD12_RS19135 PF02416 mttA/Hcf106 family RD12_RS19140 PF02416 mttA/Hcf106 family RD12_RS19145 PF00902 Sec-independent protein translocase protein (TatC) RD12_RS19150 PF13560 Helix-turn-helix domain RD12_RS19150 PF13683 RD12_RS19150 RD12_RS19155 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS19160 PF02917 Pertussis toxin, subunit 1 RD12_RS19165 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD12_RS19165 PF03440 Aerolysin/Pertussis toxin (APT) domain RD12_RS19170 PF09275 Pertussis toxin S4 subunit RD12_RS19175 PF09276 Pertussis toxin S5 subunit RD12_RS19180 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD12_RS19180 PF03440 Aerolysin/Pertussis toxin (APT) domain RD12_RS19185 PF04956 RD12_RS19185 RD12_RS19190 PF05101 RD12_RS19190 RD12_RS19195 PF03135 RD12_RS19195 RD12_RS19200 PF04610 RD12_RS19200 RD12_RS19210 PF04335 VirB8 protein RD12_RS19215 PF03524 Conjugal transfer protein RD12_RS19220 PF03743 Bacterial conjugation TrbI-like protein RD12_RS19225 PF00437 Type II/IV secretion system protein RD12_RS19235 PF00892 EamA-like transporter family RD12_RS19240 PF12833 Helix-turn-helix domain RD12_RS19245 PF06803 RD12_RS19245 RD12_RS19250 PF11067 RD12_RS19250 RD12_RS19255 PF01926 50S ribosome-binding GTPase RD12_RS19255 PF11981 RD12_RS19255 RD12_RS19260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS19265 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS19270 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS19270 PF12911 RD12_RS19270 RD12_RS19275 PF00005 ABC transporter RD12_RS19280 PF00665 Integrase core domain RD12_RS19280 PF13011 RD12_RS19280 RD12_RS19285 PF01960 ArgJ family RD12_RS19290 PF05673 Protein of unknown function (DUF815) RD12_RS19295 PF00293 NUDIX domain RD12_RS19295 PF02581 Thiamine monophosphate synthase/TENI RD12_RS19300 PF00665 Integrase core domain RD12_RS19300 PF13011 RD12_RS19300 RD12_RS19305 PF00665 Integrase core domain RD12_RS19305 PF13011 RD12_RS19305 RD12_RS19310 PF00665 Integrase core domain RD12_RS19310 PF13011 RD12_RS19310 RD12_RS19315 PF02321 Outer membrane efflux protein RD12_RS19320 PF00873 AcrB/AcrD/AcrF family RD12_RS19325 PF00873 AcrB/AcrD/AcrF family RD12_RS19330 PF13437 HlyD family secretion protein RD12_RS19330 PF13533 Biotin-lipoyl like RD12_RS19335 PF07072 Protein of unknown function (DUF1342) RD12_RS19340 PF01121 Dephospho-CoA kinase RD12_RS19345 PF01478 Type IV leader peptidase family RD12_RS19345 PF06750 RD12_RS19345 RD12_RS19350 PF04170 NlpE N-terminal domain RD12_RS19355 PF00196 Bacterial regulatory proteins, luxR family RD12_RS19360 PF02569 Pantoate-beta-alanine ligase RD12_RS19365 PF02616 ScpA/B protein RD12_RS19370 PF11943 RD12_RS19370 RD12_RS19375 PF07690 Major Facilitator Superfamily RD12_RS19380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD12_RS19380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD12_RS19385 PF03653 RD12_RS19385 RD12_RS19390 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS19395 PF00005 ABC transporter RD12_RS19400 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS19405 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS19410 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD12_RS19415 PF00005 ABC transporter RD12_RS19420 PF02687 RD12_RS19420 RD12_RS19425 PF03975 CheD chemotactic sensory transduction RD12_RS19430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD12_RS19435 PF00633 Helix-hairpin-helix motif RD12_RS19435 PF00730 HhH-GPD superfamily base excision DNA repair protein RD12_RS19435 PF14815 NUDIX domain RD12_RS19440 PF13560 Helix-turn-helix domain RD12_RS19445 PF08241 Methyltransferase domain RD12_RS19450 PF00665 Integrase core domain RD12_RS19450 PF13011 RD12_RS19450 RD12_RS19455 PF02515 CoA-transferase family III RD12_RS19460 PF02515 CoA-transferase family III RD12_RS19465 PF03972 MmgE/PrpD family RD12_RS19470 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS19475 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS19480 PF00881 Nitroreductase family RD12_RS19485 PF00440 Bacterial regulatory proteins, tetR family RD12_RS19490 PF00682 HMGL-like RD12_RS19495 PF00378 Enoyl-CoA hydratase/isomerase family RD12_RS19500 PF02515 CoA-transferase family III RD12_RS19505 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS19510 PF00665 Integrase core domain RD12_RS19510 PF13011 RD12_RS19510 RD12_RS19515 PF00199 Catalase RD12_RS19515 PF06628 Catalase-related immune-responsive RD12_RS19520 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS19525 PF00005 ABC transporter RD12_RS19530 PF13379 NMT1-like family RD12_RS19535 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD12_RS19540 PF01546 Peptidase family M20/M25/M40 RD12_RS19540 PF07687 Peptidase dimerisation domain RD12_RS19545 PF00005 ABC transporter RD12_RS19545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS19550 PF00005 ABC transporter RD12_RS19550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD12_RS19555 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS19555 PF12911 RD12_RS19555 RD12_RS19560 PF00528 Binding-protein-dependent transport system inner membrane component RD12_RS19565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD12_RS19570 PF01926 50S ribosome-binding GTPase RD12_RS19570 PF10396 GTP-binding protein TrmE N-terminus RD12_RS19570 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE RD12_RS19575 PF07690 Major Facilitator Superfamily RD12_RS19580 PF00072 Response regulator receiver domain RD12_RS19580 PF00486 Transcriptional regulatory protein, C terminal RD12_RS19585 PF00512 His Kinase A (phospho-acceptor) domain RD12_RS19585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD12_RS19585 PF08521 RD12_RS19585 RD12_RS19590 PF03401 Tripartite tricarboxylate transporter family receptor RD12_RS19595 PF07331 RD12_RS19595 RD12_RS19600 PF01970 RD12_RS19600 RD12_RS19605 PF00155 Aminotransferase class I and II RD12_RS19610 PF00313 'Cold-shock' DNA-binding domain