RD12_RS00005 SM01228 RD12_RS00005 RD12_RS00025 SM00470 ParB-like nuclease domain RD12_RS00030 SM00870 RD12_RS00030 RD12_RS00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RD12_RS00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RD12_RS00075 SM00649 Ribosomal protein L11/L12 RD12_RS00100 SM00663 RNA polymerase I subunit A N-terminus RD12_RS00130 SM00448 cheY-homologous receiver domain RD12_RS00130 SM00862 Transcriptional regulatory protein, C terminal RD12_RS00200 SM00563 Phosphate acyltransferases RD12_RS00240 SM00421 helix_turn_helix, Lux Regulon RD12_RS00290 SM00382 ATPases associated with a variety of cellular activities RD12_RS00305 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS00395 SM00387 Histidine kinase-like ATPases RD12_RS00405 SM00644 RD12_RS00405 RD12_RS00420 SM00382 ATPases associated with a variety of cellular activities RD12_RS00420 SM00962 SRP54-type protein, GTPase domain RD12_RS00420 SM00963 SRP54-type protein, helical bundle domain RD12_RS00520 SM00382 ATPases associated with a variety of cellular activities RD12_RS00545 SM00936 Penicillin-binding protein 5, C-terminal domain RD12_RS00565 SM00729 Elongator protein 3, MiaB family, Radical SAM RD12_RS00610 SM00836 DALR anticodon binding domain RD12_RS00610 SM01016 Arginyl tRNA synthetase N terminal dom RD12_RS00645 SM00382 ATPases associated with a variety of cellular activities RD12_RS00660 SM00382 ATPases associated with a variety of cellular activities RD12_RS00695 SM00917 LeuA allosteric (dimerisation) domain RD12_RS00750 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS00750 SM00895 RD12_RS00750 RD12_RS00785 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS00795 SM00797 Allophanate hydrolase subunit 2 RD12_RS00800 SM00796 Allophanate hydrolase subunit 1 RD12_RS00825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS00825 SM00387 Histidine kinase-like ATPases RD12_RS00825 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS00830 SM00448 cheY-homologous receiver domain RD12_RS00830 SM00862 Transcriptional regulatory protein, C terminal RD12_RS00835 SM00091 PAS domain RD12_RS00835 SM00387 Histidine kinase-like ATPases RD12_RS00835 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS00840 SM00448 cheY-homologous receiver domain RD12_RS00840 SM00862 Transcriptional regulatory protein, C terminal RD12_RS00850 SM00978 RD12_RS00850 RD12_RS00875 SM00382 ATPases associated with a variety of cellular activities RD12_RS00890 SM00487 DEAD-like helicases superfamily RD12_RS00890 SM00490 helicase superfamily c-terminal domain RD12_RS00935 SM00450 Rhodanese Homology Domain RD12_RS01030 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS01030 SM00895 RD12_RS01030 RD12_RS01080 SM00882 Coenzyme A transferase RD12_RS01085 SM00882 Coenzyme A transferase RD12_RS01090 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS01110 SM00869 Autotransporter beta-domain RD12_RS01140 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS01140 SM00895 RD12_RS01140 RD12_RS01205 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS01205 SM00895 RD12_RS01205 RD12_RS01245 SM00382 ATPases associated with a variety of cellular activities RD12_RS01260 SM00853 MutL C terminal dimerisation domain RD12_RS01260 SM01340 RD12_RS01260 RD12_RS01270 SM00646 RD12_RS01270 RD12_RS01350 SM00382 ATPases associated with a variety of cellular activities RD12_RS01355 SM00382 ATPases associated with a variety of cellular activities RD12_RS01435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD12_RS01465 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS01475 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS01525 SM00347 helix_turn_helix multiple antibiotic resistance protein RD12_RS01550 SM00382 ATPases associated with a variety of cellular activities RD12_RS01555 SM00382 ATPases associated with a variety of cellular activities RD12_RS01625 SM00732 Likely ribonuclease with RNase H fold. RD12_RS01640 SM00563 Phosphate acyltransferases RD12_RS01690 SM00849 Metallo-beta-lactamase superfamily RD12_RS01715 SM00267 diguanylate cyclase RD12_RS01740 SM00382 ATPases associated with a variety of cellular activities RD12_RS01760 SM00965 Secretin and TonB N terminus short domain RD12_RS01805 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS01805 SM00895 RD12_RS01805 RD12_RS01820 SM01236 RD12_RS01820 RD12_RS01840 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS01865 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD12_RS01880 SM00845 GatB domain RD12_RS01955 SM00749 bacterial OsmY and nodulation domain RD12_RS02020 SM00450 Rhodanese Homology Domain RD12_RS02025 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS02065 SM00450 Rhodanese Homology Domain RD12_RS02160 SM00479 RD12_RS02160 RD12_RS02235 SM00829 Enoylreductase RD12_RS02245 SM00881 CoA binding domain RD12_RS02275 SM00344 helix_turn_helix ASNC type RD12_RS02300 SM00881 CoA binding domain RD12_RS02310 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS02335 SM00937 RD12_RS02335 RD12_RS02365 SM01092 CO dehydrogenase flavoprotein C-terminal domain RD12_RS02375 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD12_RS02430 SM00382 ATPases associated with a variety of cellular activities RD12_RS02450 SM00116 Domain in cystathionine beta-synthase and other proteins. RD12_RS02480 SM00834 Putative regulatory protein RD12_RS02500 SM00155 Phospholipase D. Active site motifs. RD12_RS02540 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS02660 SM00382 ATPases associated with a variety of cellular activities RD12_RS02685 SM00487 DEAD-like helicases superfamily RD12_RS02685 SM00490 helicase superfamily c-terminal domain RD12_RS02705 SM00382 ATPases associated with a variety of cellular activities RD12_RS02765 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD12_RS02775 SM00905 Dihydroneopterin aldolase RD12_RS02805 SM00925 MltA specific insert domain RD12_RS02885 SM00903 Flavin reductase like domain RD12_RS02910 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS02910 SM00866 RD12_RS02910 RD12_RS02945 SM00382 ATPases associated with a variety of cellular activities RD12_RS03030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS03030 SM00387 Histidine kinase-like ATPases RD12_RS03035 SM00448 cheY-homologous receiver domain RD12_RS03035 SM00862 Transcriptional regulatory protein, C terminal RD12_RS03075 SM00257 Lysin motif RD12_RS03080 SM00849 Metallo-beta-lactamase superfamily RD12_RS03155 SM00822 RD12_RS03155 RD12_RS03165 SM00382 ATPases associated with a variety of cellular activities RD12_RS03170 SM00382 ATPases associated with a variety of cellular activities RD12_RS03250 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS03250 SM00866 RD12_RS03250 RD12_RS03270 SM00422 helix_turn_helix, mercury resistance RD12_RS03300 SM00988 UreE urease accessory protein, N-terminal domain RD12_RS03355 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS03385 SM00984 UDP binding domain RD12_RS03445 SM00448 cheY-homologous receiver domain RD12_RS03445 SM00862 Transcriptional regulatory protein, C terminal RD12_RS03450 SM00387 Histidine kinase-like ATPases RD12_RS03450 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS03485 SM00849 Metallo-beta-lactamase superfamily RD12_RS03490 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RD12_RS03490 SM01232 RD12_RS03490 RD12_RS03495 SM00028 Tetratricopeptide repeats RD12_RS03515 SM01400 RD12_RS03515 RD12_RS03595 SM00869 Autotransporter beta-domain RD12_RS03605 SM00862 Transcriptional regulatory protein, C terminal RD12_RS03640 SM00422 helix_turn_helix, mercury resistance RD12_RS03640 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS03680 SM00344 helix_turn_helix ASNC type RD12_RS03680 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS03730 SM00382 ATPases associated with a variety of cellular activities RD12_RS03735 SM00155 Phospholipase D. Active site motifs. RD12_RS03745 SM00986 Uracil DNA glycosylase superfamily RD12_RS03745 SM00987 UreE urease accessory protein, C-terminal domain RD12_RS03750 SM00487 DEAD-like helicases superfamily RD12_RS03750 SM00490 helicase superfamily c-terminal domain RD12_RS03805 SM00996 S-adenosyl-L-homocysteine hydrolase RD12_RS03805 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD12_RS03875 SM00382 ATPases associated with a variety of cellular activities RD12_RS03890 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD12_RS03905 SM00382 ATPases associated with a variety of cellular activities RD12_RS03905 SM01086 C-terminal, D2-small domain, of ClpB protein RD12_RS04005 SM00344 helix_turn_helix ASNC type RD12_RS04040 SM00151 SWI complex, BAF60b domains RD12_RS04055 SM00382 ATPases associated with a variety of cellular activities RD12_RS04125 SM00842 Cell division protein FtsA RD12_RS04130 SM00864 Tubulin/FtsZ family, GTPase domain RD12_RS04130 SM00865 Tubulin/FtsZ family, C-terminal domain RD12_RS04150 SM00957 SecA DEAD-like domain RD12_RS04150 SM00958 SecA preprotein cross-linking domain RD12_RS04180 SM00344 helix_turn_helix ASNC type RD12_RS04210 SM00955 RD12_RS04210 RD12_RS04240 SM00878 Biotin carboxylase C-terminal domain RD12_RS04320 SM00344 helix_turn_helix ASNC type RD12_RS04350 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS04350 SM00895 RD12_RS04350 RD12_RS04360 SM00487 DEAD-like helicases superfamily RD12_RS04360 SM00490 helicase superfamily c-terminal domain RD12_RS04380 SM00382 ATPases associated with a variety of cellular activities RD12_RS04420 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD12_RS04455 SM00363 S4 RNA-binding domain RD12_RS04550 SM00387 Histidine kinase-like ATPases RD12_RS04555 SM00448 cheY-homologous receiver domain RD12_RS04580 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD12_RS04630 SM00257 Lysin motif RD12_RS04670 SM00528 Domain in histone-like proteins of HNS family RD12_RS04690 SM00912 haemagglutination activity domain RD12_RS04725 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS04735 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RD12_RS04735 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RD12_RS04805 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS04805 SM00895 RD12_RS04805 RD12_RS04845 SM00382 ATPases associated with a variety of cellular activities RD12_RS04860 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS04895 SM00382 ATPases associated with a variety of cellular activities RD12_RS04920 SM00248 ankyrin repeats RD12_RS04965 SM00344 helix_turn_helix ASNC type RD12_RS04990 SM00382 ATPases associated with a variety of cellular activities RD12_RS05005 SM00829 Enoylreductase RD12_RS05035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD12_RS05060 SM00822 RD12_RS05060 RD12_RS05125 SM00822 RD12_RS05125 RD12_RS05150 SM00422 helix_turn_helix, mercury resistance RD12_RS05180 SM00382 ATPases associated with a variety of cellular activities RD12_RS05220 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS05220 SM00895 RD12_RS05220 RD12_RS05270 SM00382 ATPases associated with a variety of cellular activities RD12_RS05270 SM00930 RD12_RS05270 RD12_RS05320 SM00116 Domain in cystathionine beta-synthase and other proteins. RD12_RS05320 SM00924 MgtE intracellular N domain RD12_RS05345 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS05360 SM00861 Transketolase, pyrimidine binding domain RD12_RS05395 SM00382 ATPases associated with a variety of cellular activities RD12_RS05410 SM00670 Large family of predicted nucleotide-binding domains RD12_RS05495 SM00822 RD12_RS05495 RD12_RS05560 SM00357 Cold shock protein domain RD12_RS05570 SM01359 RD12_RS05570 RD12_RS05570 SM01360 RD12_RS05570 RD12_RS05580 SM00382 ATPases associated with a variety of cellular activities RD12_RS05580 SM01086 C-terminal, D2-small domain, of ClpB protein RD12_RS05625 SM00382 ATPases associated with a variety of cellular activities RD12_RS05630 SM00382 ATPases associated with a variety of cellular activities RD12_RS05650 SM00869 Autotransporter beta-domain RD12_RS05660 SM00938 Nitrogen regulatory protein P-II RD12_RS05730 SM00422 helix_turn_helix, mercury resistance RD12_RS05755 SM00729 Elongator protein 3, MiaB family, Radical SAM RD12_RS05755 SM00876 Biotin and Thiamin Synthesis associated domain RD12_RS05805 SM00852 Probable molybdopterin binding domain RD12_RS05810 SM00852 Probable molybdopterin binding domain RD12_RS05815 SM00729 Elongator protein 3, MiaB family, Radical SAM RD12_RS05850 SM00938 Nitrogen regulatory protein P-II RD12_RS05910 SM00479 RD12_RS05910 RD12_RS06005 SM01211 RD12_RS06005 RD12_RS06010 SM00912 haemagglutination activity domain RD12_RS06025 SM00347 helix_turn_helix multiple antibiotic resistance protein RD12_RS06030 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS06035 SM01007 Class II Aldolase and Adducin N-terminal domain RD12_RS06075 SM01130 RD12_RS06075 RD12_RS06120 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS06130 SM00420 helix_turn_helix, Deoxyribose operon repressor RD12_RS06130 SM01134 RD12_RS06130 RD12_RS06135 SM00382 ATPases associated with a variety of cellular activities RD12_RS06140 SM00382 ATPases associated with a variety of cellular activities RD12_RS06175 SM00344 helix_turn_helix ASNC type RD12_RS06210 SM00421 helix_turn_helix, Lux Regulon RD12_RS06220 SM00869 Autotransporter beta-domain RD12_RS06230 SM00116 Domain in cystathionine beta-synthase and other proteins. RD12_RS06230 SM01240 RD12_RS06230 RD12_RS06240 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS06265 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS06280 SM00382 ATPases associated with a variety of cellular activities RD12_RS06320 SM00849 Metallo-beta-lactamase superfamily RD12_RS06320 SM01027 Beta-Casp domain RD12_RS06340 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS06360 SM00829 Enoylreductase RD12_RS06370 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS06410 SM00382 ATPases associated with a variety of cellular activities RD12_RS06415 SM00354 helix_turn _helix lactose operon repressor RD12_RS06485 SM00382 ATPases associated with a variety of cellular activities RD12_RS06520 SM00953 RD12_RS06520 RD12_RS06655 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS06675 SM00642 Alpha-amylase domain RD12_RS06690 SM00642 Alpha-amylase domain RD12_RS06695 SM00642 Alpha-amylase domain RD12_RS06700 SM00642 Alpha-amylase domain RD12_RS06705 SM00642 Alpha-amylase domain RD12_RS06710 SM00642 Alpha-amylase domain RD12_RS06755 SM00155 Phospholipase D. Active site motifs. RD12_RS06775 SM00869 Autotransporter beta-domain RD12_RS06800 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS06800 SM00895 RD12_RS06800 RD12_RS06805 SM00881 CoA binding domain RD12_RS06830 SM00354 helix_turn _helix lactose operon repressor RD12_RS06850 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD12_RS06865 SM00382 ATPases associated with a variety of cellular activities RD12_RS06875 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS06895 SM00382 ATPases associated with a variety of cellular activities RD12_RS06895 SM00962 SRP54-type protein, GTPase domain RD12_RS06910 SM00858 RD12_RS06910 RD12_RS06955 SM00047 Lysozyme subfamily 2 RD12_RS06970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD12_RS06970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS06975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD12_RS06975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS06980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD12_RS06980 SM00091 PAS domain RD12_RS06980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD12_RS06980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS07045 SM00382 ATPases associated with a variety of cellular activities RD12_RS07145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD12_RS07190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD12_RS07200 SM00935 Outer membrane protein (OmpH-like) RD12_RS07260 SM00244 prohibitin homologues RD12_RS07265 SM00267 diguanylate cyclase RD12_RS07330 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RD12_RS07335 SM00851 MGS-like domain RD12_RS07335 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD12_RS07345 SM00855 Phosphoglycerate mutase family RD12_RS07355 SM00382 ATPases associated with a variety of cellular activities RD12_RS07375 SM00052 Putative diguanylate phosphodiesterase RD12_RS07395 SM00852 Probable molybdopterin binding domain RD12_RS07435 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD12_RS07470 SM00382 ATPases associated with a variety of cellular activities RD12_RS07490 SM01329 RD12_RS07490 RD12_RS07495 SM00859 Semialdehyde dehydrogenase, NAD binding domain RD12_RS07560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RD12_RS07560 SM00267 diguanylate cyclase RD12_RS07580 SM00421 helix_turn_helix, Lux Regulon RD12_RS07580 SM00448 cheY-homologous receiver domain RD12_RS07585 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD12_RS07630 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS07645 SM00382 ATPases associated with a variety of cellular activities RD12_RS07665 SM00834 Putative regulatory protein RD12_RS07680 SM00421 helix_turn_helix, Lux Regulon RD12_RS07710 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS07720 SM01001 AIR carboxylase RD12_RS07735 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS07740 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS07750 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS07750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD12_RS07760 SM00382 ATPases associated with a variety of cellular activities RD12_RS07845 SM00382 ATPases associated with a variety of cellular activities RD12_RS07855 SM00493 RD12_RS07855 RD12_RS07925 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RD12_RS07925 SM00534 ATPase domain of DNA mismatch repair MUTS family RD12_RS07930 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RD12_RS07945 SM01130 RD12_RS07945 RD12_RS07960 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS07960 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD12_RS07970 SM00382 ATPases associated with a variety of cellular activities RD12_RS07975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD12_RS07975 SM00954 Region found in RelA / SpoT proteins RD12_RS07980 SM01409 RD12_RS07980 RD12_RS07985 SM00072 Guanylate kinase homologues. RD12_RS08000 SM00822 RD12_RS08000 RD12_RS08015 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS08050 SM00052 Putative diguanylate phosphodiesterase RD12_RS08050 SM00267 diguanylate cyclase RD12_RS08065 SM00729 Elongator protein 3, MiaB family, Radical SAM RD12_RS08070 SM01230 RD12_RS08070 RD12_RS08075 SM00091 PAS domain RD12_RS08075 SM00387 Histidine kinase-like ATPases RD12_RS08075 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS08080 SM00382 ATPases associated with a variety of cellular activities RD12_RS08080 SM00448 cheY-homologous receiver domain RD12_RS08105 SM00382 ATPases associated with a variety of cellular activities RD12_RS08150 SM00487 DEAD-like helicases superfamily RD12_RS08150 SM00490 helicase superfamily c-terminal domain RD12_RS08195 SM00382 ATPases associated with a variety of cellular activities RD12_RS08220 SM00984 UDP binding domain RD12_RS08270 SM00382 ATPases associated with a variety of cellular activities RD12_RS08275 SM00382 ATPases associated with a variety of cellular activities RD12_RS08325 SM00327 von Willebrand factor (vWF) type A domain RD12_RS08330 SM00028 Tetratricopeptide repeats RD12_RS08330 SM00327 von Willebrand factor (vWF) type A domain RD12_RS08370 SM00421 helix_turn_helix, Lux Regulon RD12_RS08370 SM00448 cheY-homologous receiver domain RD12_RS08375 SM00869 Autotransporter beta-domain RD12_RS08380 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS08485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD12_RS08500 SM00822 RD12_RS08500 RD12_RS08600 SM00382 ATPases associated with a variety of cellular activities RD12_RS08605 SM00382 ATPases associated with a variety of cellular activities RD12_RS08685 SM00248 ankyrin repeats RD12_RS08690 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS08695 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS08695 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RD12_RS08705 SM00382 ATPases associated with a variety of cellular activities RD12_RS08715 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD12_RS08755 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS08755 SM00895 RD12_RS08755 RD12_RS08795 SM00052 Putative diguanylate phosphodiesterase RD12_RS08800 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS08800 SM00073 Histidine Phosphotransfer domain RD12_RS08800 SM00091 PAS domain RD12_RS08800 SM00387 Histidine kinase-like ATPases RD12_RS08800 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS08800 SM00448 cheY-homologous receiver domain RD12_RS08805 SM00421 helix_turn_helix, Lux Regulon RD12_RS08805 SM00448 cheY-homologous receiver domain RD12_RS08810 SM00912 haemagglutination activity domain RD12_RS08905 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS08925 SM01091 Transporter associated domain RD12_RS08945 SM00028 Tetratricopeptide repeats RD12_RS08950 SM00840 RD12_RS08950 RD12_RS08955 SM00478 endonuclease III RD12_RS09070 SM00382 ATPases associated with a variety of cellular activities RD12_RS09085 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS09090 SM00881 CoA binding domain RD12_RS09120 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD12_RS09145 SM00028 Tetratricopeptide repeats RD12_RS09160 SM00347 helix_turn_helix multiple antibiotic resistance protein RD12_RS09170 SM00421 helix_turn_helix, Lux Regulon RD12_RS09215 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS09235 SM00318 Staphylococcal nuclease homologues RD12_RS09255 SM00382 ATPases associated with a variety of cellular activities RD12_RS09260 SM00347 helix_turn_helix multiple antibiotic resistance protein RD12_RS09305 SM00858 RD12_RS09305 RD12_RS09335 SM00028 Tetratricopeptide repeats RD12_RS09350 SM00382 ATPases associated with a variety of cellular activities RD12_RS09380 SM00841 Elongation factor P, C-terminal RD12_RS09380 SM01185 RD12_RS09380 RD12_RS09440 SM00479 RD12_RS09440 RD12_RS09580 SM00347 helix_turn_helix multiple antibiotic resistance protein RD12_RS09585 SM00411 bacterial (prokaryotic) histone like domain RD12_RS09640 SM00382 ATPases associated with a variety of cellular activities RD12_RS09660 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS09660 SM00895 RD12_RS09660 RD12_RS09700 SM00382 ATPases associated with a variety of cellular activities RD12_RS09720 SM00862 Transcriptional regulatory protein, C terminal RD12_RS09755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD12_RS09755 SM00465 GIY-YIG type nucleases (URI domain) RD12_RS09920 SM00822 RD12_RS09920 RD12_RS10010 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD12_RS10020 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS10030 SM00464 Found in ATP-dependent protease La (LON) RD12_RS10065 SM00382 ATPases associated with a variety of cellular activities RD12_RS10085 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS10085 SM00895 RD12_RS10085 RD12_RS10100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD12_RS10120 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS10160 SM00382 ATPases associated with a variety of cellular activities RD12_RS10265 SM00382 ATPases associated with a variety of cellular activities RD12_RS10305 SM00400 zinc finger RD12_RS10305 SM00493 RD12_RS10305 RD12_RS10305 SM00766 DNA primase DnaG DnaB-binding RD12_RS10320 SM00788 Adenylosuccinate synthetase RD12_RS10330 SM00244 prohibitin homologues RD12_RS10335 SM00244 prohibitin homologues RD12_RS10355 SM00382 ATPases associated with a variety of cellular activities RD12_RS10360 SM00564 beta-propeller repeat RD12_RS10390 SM00562 RD12_RS10390 RD12_RS10405 SM00448 cheY-homologous receiver domain RD12_RS10410 SM00387 Histidine kinase-like ATPases RD12_RS10410 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS10460 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RD12_RS10510 SM00382 ATPases associated with a variety of cellular activities RD12_RS10570 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS10570 SM00866 RD12_RS10570 RD12_RS10625 SM00271 DnaJ molecular chaperone homology domain RD12_RS10650 SM00226 Low molecular weight phosphatase family RD12_RS10655 SM00487 DEAD-like helicases superfamily RD12_RS10655 SM00490 helicase superfamily c-terminal domain RD12_RS10670 SM00869 Autotransporter beta-domain RD12_RS10695 SM00882 Coenzyme A transferase RD12_RS10700 SM00882 Coenzyme A transferase RD12_RS10755 SM00382 ATPases associated with a variety of cellular activities RD12_RS10755 SM00464 Found in ATP-dependent protease La (LON) RD12_RS10760 SM00382 ATPases associated with a variety of cellular activities RD12_RS10760 SM00994 ClpX C4-type zinc finger RD12_RS10760 SM01086 C-terminal, D2-small domain, of ClpB protein RD12_RS10780 SM00357 Cold shock protein domain RD12_RS10790 SM00357 Cold shock protein domain RD12_RS10805 SM00869 Autotransporter beta-domain RD12_RS10840 SM00382 ATPases associated with a variety of cellular activities RD12_RS10845 SM00965 Secretin and TonB N terminus short domain RD12_RS10875 SM00904 Riboflavin kinase RD12_RS10900 SM00344 helix_turn_helix ASNC type RD12_RS10960 SM00749 bacterial OsmY and nodulation domain RD12_RS11015 SM00422 helix_turn_helix, mercury resistance RD12_RS11040 SM00257 Lysin motif RD12_RS11055 SM01207 RD12_RS11055 RD12_RS11100 SM00347 helix_turn_helix multiple antibiotic resistance protein RD12_RS11135 SM00869 Autotransporter beta-domain RD12_RS11145 SM00155 Phospholipase D. Active site motifs. RD12_RS11160 SM01005 Alanine racemase, C-terminal domain RD12_RS11170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS11170 SM00331 Sigma factor PP2C-like phosphatases RD12_RS11170 SM01049 RD12_RS11170 RD12_RS11245 SM00382 ATPases associated with a variety of cellular activities RD12_RS11360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD12_RS11360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS11405 SM00382 ATPases associated with a variety of cellular activities RD12_RS11420 SM00450 Rhodanese Homology Domain RD12_RS11435 SM00829 Enoylreductase RD12_RS11450 SM00347 helix_turn_helix multiple antibiotic resistance protein RD12_RS11470 SM01329 RD12_RS11470 RD12_RS11475 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS11495 SM00382 ATPases associated with a variety of cellular activities RD12_RS11560 SM01209 RD12_RS11560 RD12_RS11560 SM01210 RD12_RS11560 RD12_RS11590 SM00869 Autotransporter beta-domain RD12_RS11630 SM00316 Ribosomal protein S1-like RNA-binding domain RD12_RS11650 SM00382 ATPases associated with a variety of cellular activities RD12_RS11705 SM00481 DNA polymerase alpha chain like domain RD12_RS11715 SM00382 ATPases associated with a variety of cellular activities RD12_RS11715 SM00487 DEAD-like helicases superfamily RD12_RS11715 SM00490 helicase superfamily c-terminal domain RD12_RS11715 SM00847 Helicase associated domain (HA2) Add an annotation RD12_RS11780 SM00382 ATPases associated with a variety of cellular activities RD12_RS11865 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS11865 SM00866 RD12_RS11865 RD12_RS11905 SM00981 RD12_RS11905 RD12_RS11960 SM00028 Tetratricopeptide repeats RD12_RS11960 SM00862 Transcriptional regulatory protein, C terminal RD12_RS11970 SM01192 RD12_RS11970 RD12_RS11970 SM01193 RD12_RS11970 RD12_RS12025 SM00382 ATPases associated with a variety of cellular activities RD12_RS12040 SM00882 Coenzyme A transferase RD12_RS12200 SM00358 Double-stranded RNA binding motif RD12_RS12200 SM00535 Ribonuclease III family RD12_RS12210 SM00838 Elongation factor G C-terminus RD12_RS12215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD12_RS12240 SM00825 Beta-ketoacyl synthase RD12_RS12250 SM00822 RD12_RS12250 RD12_RS12255 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RD12_RS12290 SM00644 RD12_RS12290 RD12_RS12335 SM01006 Siderophore biosynthesis protein domain RD12_RS12355 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS12380 SM00267 diguanylate cyclase RD12_RS12410 SM00382 ATPases associated with a variety of cellular activities RD12_RS12420 SM00843 RD12_RS12420 RD12_RS12430 SM00463 Small MutS-related domain RD12_RS12475 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS12480 SM00448 cheY-homologous receiver domain RD12_RS12480 SM00862 Transcriptional regulatory protein, C terminal RD12_RS12500 SM01329 RD12_RS12500 RD12_RS12525 SM00382 ATPases associated with a variety of cellular activities RD12_RS12550 SM00271 DnaJ molecular chaperone homology domain RD12_RS12700 SM00240 Forkhead associated domain RD12_RS12700 SM00382 ATPases associated with a variety of cellular activities RD12_RS12710 SM00858 RD12_RS12710 RD12_RS12780 SM00881 CoA binding domain RD12_RS12810 SM00382 ATPases associated with a variety of cellular activities RD12_RS12815 SM00448 cheY-homologous receiver domain RD12_RS12815 SM00862 Transcriptional regulatory protein, C terminal RD12_RS12820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS12820 SM00387 Histidine kinase-like ATPases RD12_RS12820 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS12835 SM00382 ATPases associated with a variety of cellular activities RD12_RS12850 SM00822 RD12_RS12850 RD12_RS12955 SM00422 helix_turn_helix, mercury resistance RD12_RS12960 SM00411 bacterial (prokaryotic) histone like domain RD12_RS12965 SM00873 B3/4 domain RD12_RS12965 SM00874 tRNA synthetase B5 domain RD12_RS12965 SM00896 Ferredoxin-fold anticodon binding domain RD12_RS13000 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS13030 SM00382 ATPases associated with a variety of cellular activities RD12_RS13035 SM00382 ATPases associated with a variety of cellular activities RD12_RS13070 SM00434 DNA Topoisomerase IV RD12_RS13080 SM00387 Histidine kinase-like ATPases RD12_RS13080 SM00433 TopoisomeraseII RD12_RS13090 SM00357 Cold shock protein domain RD12_RS13090 SM00382 ATPases associated with a variety of cellular activities RD12_RS13090 SM00959 Rho termination factor, N-terminal domain RD12_RS13130 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RD12_RS13130 SM00474 3'-5' exonuclease RD12_RS13130 SM00475 5'-3' exonuclease RD12_RS13130 SM00482 DNA polymerase A domain RD12_RS13170 SM00316 Ribosomal protein S1-like RNA-binding domain RD12_RS13180 SM00363 S4 RNA-binding domain RD12_RS13205 SM00833 Cobalamin synthesis protein cobW C-terminal domain RD12_RS13280 SM00382 ATPases associated with a variety of cellular activities RD12_RS13285 SM00327 von Willebrand factor (vWF) type A domain RD12_RS13310 SM01005 Alanine racemase, C-terminal domain RD12_RS13345 SM00382 ATPases associated with a variety of cellular activities RD12_RS13410 SM00869 Autotransporter beta-domain RD12_RS13415 SM00869 Autotransporter beta-domain RD12_RS13425 SM00382 ATPases associated with a variety of cellular activities RD12_RS13425 SM01086 C-terminal, D2-small domain, of ClpB protein RD12_RS13430 SM00100 Cyclic nucleotide-monophosphate binding domain RD12_RS13430 SM00419 helix_turn_helix, cAMP Regulatory protein RD12_RS13500 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS13515 SM00382 ATPases associated with a variety of cellular activities RD12_RS13580 SM01007 Class II Aldolase and Adducin N-terminal domain RD12_RS13605 SM00822 RD12_RS13605 RD12_RS13615 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RD12_RS13670 SM00822 RD12_RS13670 RD12_RS13685 SM00363 S4 RNA-binding domain RD12_RS13695 SM00491 RD12_RS13695 RD12_RS13700 SM00316 Ribosomal protein S1-like RNA-binding domain RD12_RS13700 SM00732 Likely ribonuclease with RNase H fold. RD12_RS13760 SM00861 Transketolase, pyrimidine binding domain RD12_RS13775 SM00344 helix_turn_helix ASNC type RD12_RS13785 SM00919 Malic enzyme, NAD binding domain RD12_RS13785 SM01274 RD12_RS13785 RD12_RS13805 SM00481 DNA polymerase alpha chain like domain RD12_RS13835 SM00869 Autotransporter beta-domain RD12_RS13845 SM00382 ATPases associated with a variety of cellular activities RD12_RS13865 SM00937 RD12_RS13865 RD12_RS13870 SM00822 RD12_RS13870 RD12_RS13895 SM00382 ATPases associated with a variety of cellular activities RD12_RS13915 SM00382 ATPases associated with a variety of cellular activities RD12_RS13925 SM00052 Putative diguanylate phosphodiesterase RD12_RS13925 SM00267 diguanylate cyclase RD12_RS13925 SM00387 Histidine kinase-like ATPases RD12_RS13925 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS13930 SM00448 cheY-homologous receiver domain RD12_RS13930 SM00862 Transcriptional regulatory protein, C terminal RD12_RS13950 SM00116 Domain in cystathionine beta-synthase and other proteins. RD12_RS13985 SM01103 RD12_RS13985 RD12_RS13995 SM00382 ATPases associated with a variety of cellular activities RD12_RS14040 SM00382 ATPases associated with a variety of cellular activities RD12_RS14065 SM00919 Malic enzyme, NAD binding domain RD12_RS14065 SM01274 RD12_RS14065 RD12_RS14115 SM00869 Autotransporter beta-domain RD12_RS14145 SM01323 RD12_RS14145 RD12_RS14170 SM00729 Elongator protein 3, MiaB family, Radical SAM RD12_RS14185 SM01091 Transporter associated domain RD12_RS14225 SM00448 cheY-homologous receiver domain RD12_RS14230 SM00448 cheY-homologous receiver domain RD12_RS14240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RD12_RS14240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS14245 SM00260 Two component signalling adaptor domain RD12_RS14250 SM00073 Histidine Phosphotransfer domain RD12_RS14250 SM00260 Two component signalling adaptor domain RD12_RS14250 SM00387 Histidine kinase-like ATPases RD12_RS14250 SM01231 RD12_RS14250 RD12_RS14255 SM00448 cheY-homologous receiver domain RD12_RS14290 SM00316 Ribosomal protein S1-like RNA-binding domain RD12_RS14310 SM00852 Probable molybdopterin binding domain RD12_RS14330 SM00271 DnaJ molecular chaperone homology domain RD12_RS14380 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD12_RS14385 SM00861 Transketolase, pyrimidine binding domain RD12_RS14420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RD12_RS14420 SM00091 PAS domain RD12_RS14420 SM00387 Histidine kinase-like ATPases RD12_RS14420 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS14425 SM00421 helix_turn_helix, Lux Regulon RD12_RS14425 SM00448 cheY-homologous receiver domain RD12_RS14470 SM00363 S4 RNA-binding domain RD12_RS14520 SM00729 Elongator protein 3, MiaB family, Radical SAM RD12_RS14540 SM00382 ATPases associated with a variety of cellular activities RD12_RS14575 SM00893 Electron transfer flavoprotein domain RD12_RS14580 SM00893 Electron transfer flavoprotein domain RD12_RS14630 SM00411 bacterial (prokaryotic) histone like domain RD12_RS14635 SM00316 Ribosomal protein S1-like RNA-binding domain RD12_RS14655 SM00830 Chorismate mutase type II RD12_RS14665 SM00434 DNA Topoisomerase IV RD12_RS14770 SM00382 ATPases associated with a variety of cellular activities RD12_RS14820 SM00878 Biotin carboxylase C-terminal domain RD12_RS14825 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS14825 SM00866 RD12_RS14825 RD12_RS14900 SM00382 ATPases associated with a variety of cellular activities RD12_RS14940 SM01387 RD12_RS14940 RD12_RS14945 SM00316 Ribosomal protein S1-like RNA-binding domain RD12_RS14945 SM00322 K homology RNA-binding domain RD12_RS14975 SM00829 Enoylreductase RD12_RS15000 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS15065 SM00450 Rhodanese Homology Domain RD12_RS15090 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS15150 SM00014 Acid phosphatase homologues RD12_RS15205 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD12_RS15210 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD12_RS15295 SM00487 DEAD-like helicases superfamily RD12_RS15295 SM00490 helicase superfamily c-terminal domain RD12_RS15295 SM00982 RD12_RS15295 RD12_RS15295 SM01058 CarD-like/TRCF domain RD12_RS15355 SM00382 ATPases associated with a variety of cellular activities RD12_RS15375 SM00829 Enoylreductase RD12_RS15380 SM00895 RD12_RS15380 RD12_RS15385 SM00869 Autotransporter beta-domain RD12_RS15390 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS15390 SM00895 RD12_RS15390 RD12_RS15420 SM00382 ATPases associated with a variety of cellular activities RD12_RS15435 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS15455 SM00382 ATPases associated with a variety of cellular activities RD12_RS15535 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RD12_RS15540 SM00862 Transcriptional regulatory protein, C terminal RD12_RS15545 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS15585 SM00965 Secretin and TonB N terminus short domain RD12_RS15590 SM00867 YceI-like domain RD12_RS15625 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS15645 SM00382 ATPases associated with a variety of cellular activities RD12_RS15710 SM00650 Ribosomal RNA adenine dimethylases RD12_RS15755 SM00382 ATPases associated with a variety of cellular activities RD12_RS15810 SM00448 cheY-homologous receiver domain RD12_RS15810 SM00862 Transcriptional regulatory protein, C terminal RD12_RS16040 SM00382 ATPases associated with a variety of cellular activities RD12_RS16045 SM00382 ATPases associated with a variety of cellular activities RD12_RS16070 SM00947 Carbonic anhydrase RD12_RS16085 SM00341 Helicase and RNase D C-terminal RD12_RS16085 SM00487 DEAD-like helicases superfamily RD12_RS16085 SM00490 helicase superfamily c-terminal domain RD12_RS16085 SM00956 RD12_RS16085 RD12_RS16090 SM00382 ATPases associated with a variety of cellular activities RD12_RS16105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD12_RS16115 SM00798 AICARFT/IMPCHase bienzyme RD12_RS16115 SM00851 MGS-like domain RD12_RS16140 SM01011 Aminopeptidase P, N-terminal domain RD12_RS16215 SM00487 DEAD-like helicases superfamily RD12_RS16215 SM00490 helicase superfamily c-terminal domain RD12_RS16235 SM00852 Probable molybdopterin binding domain RD12_RS16240 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS16320 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS16320 SM00895 RD12_RS16320 RD12_RS16340 SM00919 Malic enzyme, NAD binding domain RD12_RS16340 SM01274 RD12_RS16340 RD12_RS16360 SM00382 ATPases associated with a variety of cellular activities RD12_RS16390 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RD12_RS16425 SM00382 ATPases associated with a variety of cellular activities RD12_RS16425 SM00962 SRP54-type protein, GTPase domain RD12_RS16425 SM00963 SRP54-type protein, helical bundle domain RD12_RS16430 SM00880 RD12_RS16430 RD12_RS16470 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS16510 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RD12_RS16530 SM00869 Autotransporter beta-domain RD12_RS16540 SM00883 Chaperonin 10 Kd subunit RD12_RS16595 SM00267 diguanylate cyclase RD12_RS16600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD12_RS16645 SM00155 Phospholipase D. Active site motifs. RD12_RS16680 SM01144 RD12_RS16680 RD12_RS16690 SM00316 Ribosomal protein S1-like RNA-binding domain RD12_RS16690 SM00357 Cold shock protein domain RD12_RS16690 SM00955 RD12_RS16690 RD12_RS16695 SM00967 RNA 2'-O ribose methyltransferase substrate binding RD12_RS16705 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RD12_RS16710 SM00411 bacterial (prokaryotic) histone like domain RD12_RS16735 SM00448 cheY-homologous receiver domain RD12_RS16735 SM00862 Transcriptional regulatory protein, C terminal RD12_RS16740 SM00387 Histidine kinase-like ATPases RD12_RS16740 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS16795 SM01130 RD12_RS16795 RD12_RS16800 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS16800 SM00895 RD12_RS16800 RD12_RS16815 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS16830 SM00387 Histidine kinase-like ATPases RD12_RS16830 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS16840 SM00448 cheY-homologous receiver domain RD12_RS16840 SM00862 Transcriptional regulatory protein, C terminal RD12_RS16850 SM00986 Uracil DNA glycosylase superfamily RD12_RS16850 SM00987 UreE urease accessory protein, C-terminal domain RD12_RS16860 SM00968 SMC proteins Flexible Hinge Domain RD12_RS16865 SM00771 ZipA, C-terminal domain (FtsZ-binding) RD12_RS16870 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RD12_RS16870 SM00292 breast cancer carboxy-terminal domain RD12_RS16870 SM00532 Ligase N family RD12_RS16895 SM00382 ATPases associated with a variety of cellular activities RD12_RS16920 SM00382 ATPases associated with a variety of cellular activities RD12_RS16950 SM00382 ATPases associated with a variety of cellular activities RD12_RS16955 SM00382 ATPases associated with a variety of cellular activities RD12_RS16960 SM00478 endonuclease III RD12_RS16960 SM00525 RD12_RS16960 RD12_RS17005 SM00954 Region found in RelA / SpoT proteins RD12_RS17045 SM00316 Ribosomal protein S1-like RNA-binding domain RD12_RS17050 SM00363 S4 RNA-binding domain RD12_RS17120 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RD12_RS17135 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS17135 SM00895 RD12_RS17135 RD12_RS17145 SM00357 Cold shock protein domain RD12_RS17215 SM00838 Elongation factor G C-terminus RD12_RS17215 SM00889 Elongation factor G, domain IV RD12_RS17220 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS17245 SM01130 RD12_RS17245 RD12_RS17305 SM00881 CoA binding domain RD12_RS17310 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS17320 SM00861 Transketolase, pyrimidine binding domain RD12_RS17360 SM00382 ATPases associated with a variety of cellular activities RD12_RS17365 SM00382 ATPases associated with a variety of cellular activities RD12_RS17395 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS17415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RD12_RS17415 SM00245 tail specific protease RD12_RS17425 SM00855 Phosphoglycerate mutase family RD12_RS17430 SM00450 Rhodanese Homology Domain RD12_RS17490 SM00382 ATPases associated with a variety of cellular activities RD12_RS17510 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD12_RS17575 SM00347 helix_turn_helix multiple antibiotic resistance protein RD12_RS17590 SM00448 cheY-homologous receiver domain RD12_RS17595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RD12_RS17595 SM00387 Histidine kinase-like ATPases RD12_RS17595 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS17665 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS17685 SM00344 helix_turn_helix ASNC type RD12_RS17735 SM00729 Elongator protein 3, MiaB family, Radical SAM RD12_RS17755 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS17755 SM00895 RD12_RS17755 RD12_RS17795 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS17815 SM00869 Autotransporter beta-domain RD12_RS17845 SM01119 RD12_RS17845 RD12_RS17855 SM00244 prohibitin homologues RD12_RS17950 SM00387 Histidine kinase-like ATPases RD12_RS17950 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS17985 SM01234 RD12_RS17985 RD12_RS18000 SM00382 ATPases associated with a variety of cellular activities RD12_RS18000 SM00760 Bacterial dnaA protein helix-turn-helix domain RD12_RS18005 SM00480 DNA polymerase III beta subunit RD12_RS18010 SM00387 Histidine kinase-like ATPases RD12_RS18010 SM00433 TopoisomeraseII RD12_RS18015 SM00346 helix_turn_helix isocitrate lyase regulation RD12_RS18040 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS18040 SM00871 Bacterial transcription activator, effector binding domain RD12_RS18060 SM00422 helix_turn_helix, mercury resistance RD12_RS18065 SM00849 Metallo-beta-lactamase superfamily RD12_RS18095 SM00878 Biotin carboxylase C-terminal domain RD12_RS18095 SM01209 RD12_RS18095 RD12_RS18115 SM01119 RD12_RS18115 RD12_RS18150 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RD12_RS18150 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RD12_RS18150 SM00493 RD12_RS18150 RD12_RS18160 SM00382 ATPases associated with a variety of cellular activities RD12_RS18190 SM00344 helix_turn_helix ASNC type RD12_RS18200 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain RD12_RS18220 SM01018 B12 binding domain RD12_RS18300 SM00838 Elongation factor G C-terminus RD12_RS18300 SM00889 Elongation factor G, domain IV RD12_RS18310 SM01403 RD12_RS18310 RD12_RS18330 SM01382 RD12_RS18330 RD12_RS18330 SM01383 RD12_RS18330 RD12_RS18345 SM00322 K homology RNA-binding domain RD12_RS18380 SM01374 RD12_RS18380 RD12_RS18455 SM00363 S4 RNA-binding domain RD12_RS18455 SM01390 RD12_RS18455 RD12_RS18460 SM00662 RNA polymerases D RD12_RS18490 SM01004 Delta-aminolevulinic acid dehydratase RD12_RS18520 SM01219 RD12_RS18520 RD12_RS18540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RD12_RS18590 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS18590 SM00866 RD12_RS18590 RD12_RS18635 SM00382 ATPases associated with a variety of cellular activities RD12_RS18660 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS18660 SM00895 RD12_RS18660 RD12_RS18690 SM01130 RD12_RS18690 RD12_RS18700 SM00257 Lysin motif RD12_RS18750 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS18760 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS18765 SM00345 helix_turn_helix gluconate operon transcriptional repressor RD12_RS18780 SM00382 ATPases associated with a variety of cellular activities RD12_RS18795 SM00829 Enoylreductase RD12_RS18845 SM00382 ATPases associated with a variety of cellular activities RD12_RS18895 SM00984 UDP binding domain RD12_RS18985 SM00100 Cyclic nucleotide-monophosphate binding domain RD12_RS19010 SM00829 Enoylreductase RD12_RS19040 SM00382 ATPases associated with a variety of cellular activities RD12_RS19150 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS19240 SM00342 helix_turn_helix, arabinose operon control protein RD12_RS19355 SM00421 helix_turn_helix, Lux Regulon RD12_RS19395 SM00382 ATPases associated with a variety of cellular activities RD12_RS19410 SM00062 Bacterial periplasmic substrate-binding proteins RD12_RS19415 SM00382 ATPases associated with a variety of cellular activities RD12_RS19435 SM00478 endonuclease III RD12_RS19440 SM00530 Helix-turn-helix XRE-family like proteins RD12_RS19515 SM01060 RD12_RS19515 RD12_RS19525 SM00382 ATPases associated with a variety of cellular activities RD12_RS19545 SM00382 ATPases associated with a variety of cellular activities RD12_RS19550 SM00382 ATPases associated with a variety of cellular activities RD12_RS19580 SM00448 cheY-homologous receiver domain RD12_RS19580 SM00862 Transcriptional regulatory protein, C terminal RD12_RS19585 SM00387 Histidine kinase-like ATPases RD12_RS19585 SM00388 His Kinase A (phosphoacceptor) domain RD12_RS19610 SM00357 Cold shock protein domain