CXD87_RS00015    3394 ..    3417 +  -6.8  -2.96979   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCTGTTCC  51 16
CXD87_RS00020 NONE
CXD87_RS00025    5210 ..    5241 +  -3.6  -3.14344   ACGCGGCCAGCGGCG      CTTACCG-CGCCG GCTCGTA CGGCGTCGGGCAG      TTGCTGGCGGCCGTG  45 103
CXD87_RS00035    6413 ..    6434 +  -7.3  -4.09685   CTCAGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  67 116
CXD87_RS00040 NONE
CXD87_RS00045    6668 ..    6680 +  -2.7  -3.65046   GTCATGGGCACCATC                GAATT CTA AGTTC                TTCTTCAAGTCAGAA  53 28
         tuf    7926 ..    7960 + -18.1  -3.72893   AAGGCGCGGTTTTCC    CATGGATAGAGGGGCC GGAT GGCC-CTCTATCCATG     TTTGCTGGAAAAGTA  93 39
CXD87_RS00055 NONE
        secE NONE
        nusG    9056 ..    9074 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CXD87_RS00075   10300 ..   10321 + -14.5  -2.62184   ATAGAACTTTGGGCC           GCATCCGGA CTTG TCCGGATGC            TGCTGTCAAAGACCG  71 55
CXD87_RS00080   11043 ..   11056 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG CGTC CGGAA                TTCGCTGAACGACAA  41 31
CXD87_RS00085   11517 ..   11549 + -17.7  -4.35524   AGACCTCGCGTCGAC      GCCCGGGGACAGC GCTCTTA GCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 40
        rpoB NONE
        rpoC   20076 ..   20099 + -16.8   -4.4078   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 83
CXD87_RS00105   22150 ..   22174 +  -3.4  -3.02144   AGCCCCAGGCCAGCG          CCGCCTACTT CGTTC GAGCCGGCGG          TGTTGACGCGCGTAA  42 228
CXD87_RS00125   27452 ..   27486 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS00160 NONE
CXD87_RS00165   34454 ..   34511 + -16.7  -3.53224   ACCTGATGGCGCTGT GCGAACCCGCGCCATGACGCCGGGCCGG CGC CCGGCACGGCCCCGCGGCCCGGGC-CGC TTTGCGGGCCGACTA  86 9
CXD87_RS00170 NONE
        glyQ NONE
CXD87_RS00185 NONE
CXD87_RS00190   40595 ..   40613 +  -2.2  -2.53015   CAACTGCTGCAGGAG             GCCTGATC CAT GGCCTGGC             TGCGTTCGGCGCTGT  37 20
CXD87_RS00195 NONE
CXD87_RS00200   42211 ..   42236 +  -5.9  -3.74693   CCCTGCCGCAGTTCT         GAGCCCGCGCC GGCT GGCGCGGCCGA          TTTGCTACGATGACG  59 24
        gloA NONE
CXD87_RS00210   43600 ..   43610 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  57 407
CXD87_RS00220   45098 ..   45110 +  -6.2  -2.71144   GGCCACGCCCGGGGC                CGCC GGCCA GGCG                TAATTGGCCAGGCTG  47 509
CXD87_RS00230   46039 ..   46051 +  -6.2  -3.96531   AGTCTCGATTCGTGG                CGGC ATCAA GCCG                TTTATCCATATCTGA  64 315
CXD87_RS00240   47473 ..   47511 + -10.9  -3.14132   GGGCCAGGTTGATCT  CCAGCGGCGCGGCGGC GCGGGAAG GCCGCCGCGAC-CGGG   TTGGTGCCCAGCAGC  64 520
CXD87_RS00250 NONE
        metW   50078 ..   50088 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 97
CXD87_RS00265   51098 ..   51113 +  -3.2  -2.70932   TCACAGCTAGCAGGA              CCGG CGCGCCTA CCGG               TCGTTCCACGGGAGA  40 31
CXD87_RS00270   52437 ..   52452 +  -7.5  -3.14527   CGCTACCCGCGCAAG              CCGCC CGCAGT GGCGG               TATTGATAACAATTC  54 71
CXD87_RS00375   70070 ..   70080 +  -4.6  -3.07013   CAAGCATGGACGCAT                 GTCG CAA CGGC                 TGTATTGACCCAGTG  45 59
CXD87_RS00380   70668 ..   70678 +  -4.6  -3.10464   ATTCAACAAGAACAC                 CGTG CAG CGCG                 TGTTCCAGTTGATGG  47 249
        htpG   73562 ..   73594 +  -6.8  -4.08767   ATGCGCTCGATCAAG      GGGTGGCTGTCCCC GCGCG GGGGGCTGACACCG      TTTTGGCAGGCTGGC  67 43
CXD87_RS00420   77804 ..   77838 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS00430   79792 ..   79808 +  -2.1  -4.07568   AGTCTTCCCCGATCA              GCAGTTC TTC GTACAGC              TTTTCCCCGGGCCGC  58 213
        waaC   92972 ..   92998 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ACA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CXD87_RS00495   94274 ..   94284 +  -8.2  -3.14132   ATTGGCTGGGATAGC                 CCGC CGT GCGG                 TTCGTCAGGGCCGCA  56 27
CXD87_RS00515 NONE
CXD87_RS00520   98558 ..   98572 +  -4.2  -5.01732   CATGCCGGCCACCAT               CCCG CTGCGGC CGGG               TTTTTTCCAGCGCTT  81 404
CXD87_RS00530 NONE
CXD87_RS00535  100410 ..  100423 +  -2.4  -3.51934   TGACCCGGCCCGCGT               TGCA TCACGT TGCA                TGTTTGTAAGCGCAA  48 38
CXD87_RS00540 NONE
CXD87_RS00545  102743 ..  102768 + -13.2  -3.61178   CTGTAGCGGCCGGCA         GGCGGGCGGC CCTGGC GCCGCCCGCG          TTTCGCGTCCCTCGC  77 35
CXD87_RS00550 NONE
        lipB  103778 ..  103800 + -12.7  -3.31792   CTTTTTTGTCTCGAA           CCGGAGCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  71 49
        lipA  104853 ..  104873 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
        metC  110499 ..  110518 + -10.7  -3.89346   CCCATCAACGACAAA            GCCTCCG CATGGA CGGAGGC             TTTGTGGCGTCGGGG  77 53
CXD87_RS00610 NONE
CXD87_RS00615  114737 ..  114765 +    -6  -3.78419   GTCCGCAGGGGGACT        GGCACCGG CCAAATCCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 100
CXD87_RS00620  116017 ..  116032 +  -5.4  -2.72991   CCATGCTCCATCCGG              GGACAGG CAC CC-GTCC              TCCTTCAGCGTATCC  45 81
CXD87_RS00685  128728 ..  128770 +  -5.5   -3.1247   ACGGATCGCCGTCGA TACGGTGGCGGACCAGCTGC CAGG GCTGCTGCTGCGCCAG-GTA TTCGCTGTCGAAGAT  47 466
        rpoN  132587 ..  132602 +  -6.2  -4.30833   CCACGCCGCGGGTCG              TTAGGA CGCC TCCTAA               TTTGTTCCTGATTTC  73 22
CXD87_RS00705  132999 ..  133030 + -16.6  -3.96148   GAGCGACGCGGCGCC      TTGCGCCAGCCGGC TCAT GCTGCCTGGCGCAA       TTTATCGTCCCCACA  93 39
CXD87_RS00740  142789 ..  142802 +  -5.2  -3.77188   CGGGACGGATCCAGG               GCGC CGCATT GCGC                TATTTATGTTTCAAT  60 70
CXD87_RS00745  143562 ..  143582 +  -8.9  -3.96148   GAGCCGGGCGACGAC            CGCCTGCGC GTC GCGTAGGCC            TTTCTCCTCACGACA  70 8
CXD87_RS00775  150294 ..  150327 +  -7.4   -3.1505   CGGCCACGCCGGCCA     GCGCGCCGACCTGGT AGACC ACCAGGTCGTAG-GC     TTCCTGCGGGGTGAT  54 510
CXD87_RS00800  154062 ..  154083 +  -6.5  -4.28361   GAAGCGCACCAGTTT           C-TCGGCCAC TTC GCGGCCGATG           TTTTCCTGGGATTCC  72 373
        ubiE  160819 ..  160834 + -11.8  -3.53811   AAGGTTTGCCGCGCA              GGCCCC AACC GGGGCC               TTTCCAGCCGCTCCC  72 121
CXD87_RS00840  161989 ..  162016 + -19.2  -3.30007   CGGCCGGGCTGCACC        GTGAACCGGCCC GCCA GGGCCGGTTCGC         TTATGGGCCGGTCTT 100 103
CXD87_RS00845 NONE
        ubiB  164639 ..  164671 +  -4.8  -3.13403   TCAAGATGAACGCGA     TCACCGAGTGGGCGGC CTT GCCGGCCAC-CGA-GA     TGTTCCTGCGCGACA  47 330
CXD87_RS00880 NONE
CXD87_RS00885 NONE
CXD87_RS00890 NONE
CXD87_RS00895  173559 ..  173580 + -17.3   -4.7373   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG 100 48
CXD87_RS00905 NONE
CXD87_RS00910  175445 ..  175462 +  -6.3  -3.05844   ACAGGTCGTCGGCGA             TCAG-CGC CTC GCGGCTGA             TCTTGCGCTCGGGCG  49 219
CXD87_RS00920  176973 ..  176983 +  -6.8  -2.62735   TGGGCCGCCGGTTCC                 CAGG AGT CCTG                 TCATGTCCGCAATCT  47 104
CXD87_RS00925  177785 ..  177817 +  -2.6  -3.92324   TGGCGGCGCCGCGTC     CAGCCCC-C-GCGCCG TAG CGCCTTGGCGGGGCTG     TTTACTATTACGCCC  56 9
CXD87_RS00930  178706 ..  178750 +  -8.3  -3.92324   GGGTTCGGCCTTCTC GTCGGCGTGGCTGGCGGCCAG CAC CATGCCCTCGGACACGCCGAA TTTCATCTTGCGCGG  70 135
        apbC  182417 ..  182434 +  -3.3  -3.14125   TGGTGGTCCGGCCCG             CCTGACG CATG CGTCGGA              TATTGCGTGTCTGCC  44 21
CXD87_RS00950 NONE
CXD87_RS00955  188024 ..  188036 +  -7.7  -3.37344   GCGGCGGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  59 49
CXD87_RS00960  188815 ..  188836 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC CTC GTCGGGCTGC           TTCATGTAGCGGGAA  52 216
CXD87_RS00980  190651 ..  190679 +    -8  -5.24129   GTCCTACAATTCCCC        GAGGTCGGCCCG CTCGT CGGGCCGGTTGC        TTTTTTGTCACCAGC  95 76
CXD87_RS00985  193034 ..  193073 + -33.6  -3.65812   GCAGTAAATCCGACG  CGCCGCGCCGCGCCGCCC GAGG GGGCGGCCCGGCGCGGCG   TTGTCTTCGAGGGAG 100 34
CXD87_RS00990  194341 ..  194351 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS00995  195368 ..  195393 +  -4.7  -3.72481   TAGCCTGGCGGGCAC        GGCGCATGCGG GCAGGG CCGC--GCGCC         TATTGTTTTGGTAAA  55 38
CXD87_RS01000 NONE
CXD87_RS01005  197007 ..  197022 +    -6  -3.55444   AACAGGGGCGGATCG              GCGCCC ATCC GGACGC               TTTGCGGCATGGCGC  56 49
        gcvT  198500 ..  198523 +  -7.4  -3.97368   GGCTTCCGCGCGGCC          GTTGGC-CGCC GGA GGCGCGCAAAC          TTTCTCCATTCCCAC  68 47
        gcvH  198957 ..  198977 +  -8.1  -3.90744   CAACGGGCCGGCCCG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAAAAC  68 48
        gcvP  201877 ..  201922 +    -9  -3.75665   GTGCGCGCTCATGGC GCATGACGAGGTGCCTGTCCCC CCAT GGGGACTGGCACCT-G-CAAGA TTTCATGGCGTCTGC  68 44
CXD87_RS01030 NONE
CXD87_RS01035  205407 ..  205443 +  -6.6  -4.26019   CTTCGGCCTGTGCCT   GTGCGCCGACCTGGTG CTGGCCA CGCCAG--CGGCGCGC   TTTTGCCTGTCGTTC  70 411
CXD87_RS01045  206614 ..  206649 +  -3.2  -3.56568   GTGGCCACTTGTGCC    GCAATGCGC-CAGCAGG GAA CTTGCTACGCGCATCGG    TTTGGCAGATCATTG  49 54
CXD87_RS01050  207521 ..  207532 +  -7.2  -3.60098   GGGCTTGCCGTTCAT                GCCG ACCA CGGC                 TTTGGCGTAGCCGGT  60 481
CXD87_RS01085  212333 ..  212347 +  -4.2  -3.72893   CAGGGTGCGCGTCAG               GCCG ATCAGCC CGGC               TTTGGTCGCCGAATA  55 352
        queC  222888 ..  222901 +  -4.5  -2.82623   GCATCAGGACGGTGT               CGCGCC ATT GGC-CG               TGCTTGTAGCCCACC  44 126
CXD87_RS01125  224419 ..  224453 +  -8.4  -2.84298   CCTCCAGGCATCGCC     GCGCGACTGAGCCTGG CGC CCGGCCTGCGTTGCGC     TAGTTGTGAACTGTC  54 16
CXD87_RS01140 NONE
CXD87_RS01145  227801 ..  227822 + -18.7  -3.41051   ACGACTTTGCTGTGC           CGGGCGCCC CTTG GGGCGCCCG            TTGTCCTACCCGTAG  93 80
CXD87_RS01150  229387 ..  229409 +    -4  -4.18018   CCACCGCCTTTTCCT           GCATGCCCTG CTG CAGCGCGTCC           TTTTCGCTGACGCCC  63 123
CXD87_RS01160  232168 ..  232187 +  -5.6   -4.7497   GGCCGGCGCAACCGG            GACAGCCT TGCG GGGCTGCC             TTTTTCATGGATGGG  81 64
CXD87_RS01165  233272 ..  233282 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 76
CXD87_RS01170  234262 ..  234307 + -13.5  -3.14132   CAACCTGGACGAATA CAACCTATTGACAGTTCACAG CTAG CTGTGATGTCTCAATAGGTTG TTCATCCAGGCCGGA  72 1
CXD87_RS01175  235489 ..  235523 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS01195  238816 ..  238854 +  -7.3  -3.14229   AGGCGGCGCTCGAAG  GCGCCGACGGCGCCC-TGC AGG GCATGGGCCCGGGCG-CGC  TGTTCATCAACATGT  52 315
CXD87_RS01215  243993 ..  244011 + -11.6  -3.04144   ATCATCCATCCCACG             GCGCCGGC GGC GCCGGCCC             TGTTCGCGCTGGCCG  65 367
CXD87_RS01225  246014 ..  246061 + -10.4  -3.01712   AAGGCAATCTGCAGC CCTGACCAGGGGAGCCGCTGCCC TCA GCGCAGCGGCTCGA-TGGCCTGG TCTTCCAGCGCGGCC  60 21
CXD87_RS01250  250651 ..  250680 + -23.7  -3.18264   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 97
CXD87_RS01265  254284 ..  254313 + -23.7  -2.62616   CGACACCCGCGGCAA       GGGTGCCTGTCCC AGCC GGGACAGGCACCC        TGCTGTACGCCATCG 100 72
        fumC  257779 ..  257791 +  -4.7  -2.52464   GCGCGCCGCTAGAGC                GGCGC CGG GCGCG                TCAGTTGGGCGCGCC  42 29
CXD87_RS01290  259920 ..  259935 + -11.8   -5.4505   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC 100 54
         ggt  263105 ..  263124 +  -5.6  -4.36914   CGCCAGGAAGATCGG            CCCGGCGCC GGT GG-GCAGGG            TTTTATACGGCGCGA  69 414
CXD87_RS01320  266939 ..  266956 + -14.1  -3.84451   GTCGAACCAGGAAAA             CGCCGCC GTCA GGCGGCG              TTTGCGTTTGCGCAA  83 441
CXD87_RS01330 NONE
CXD87_RS01335 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC  274049 ..  274086 +  -2.7  -2.71041   AGGCCGGCTGCACCG   CGCCGCGCCCATGT GACTGGCCTAA GCATCGGCGC-GCG   GTTATAGTTCGCCTT  40 10
CXD87_RS01360  274807 ..  274833 +  -8.7  -2.84812   CCCAATCGGGCAGCA        CGCG-CACCAGG CCTG CCTGATGGCGCG         TGTCATGCTGTCGCT  54 157
CXD87_RS01370  276238 ..  276279 +  -7.9  -4.18488   CGGCCGGACACTGTG GGCAGTGCTTCGCGCGCAGC ATG GCTGCGCCAGGCGCA-TGTC TTTCTTGCCATCCGT  74 167
CXD87_RS01390 NONE
CXD87_RS01395  279170 ..  279182 +  -3.3  -3.34517   TGCATTGTAGTGAAA                CTTCG CGC CGCAG                TCTTTCGGACAGGCT  46 518
        mscL  284439 ..  284451 +  -6.2  -3.63569   CAGGCCCAGCACGCG                CGCC AGCTG GGCG                TTGTTGCCCCATTGC  57 479
CXD87_RS01440  286142 ..  286176 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS01470  292513 ..  292539 + -12.3  -2.58544   CAGCACCGCCAGCTC        GGCCGCGGCCAC GGCG GTG-CCGCGGTC         ATTGTGCGGGTGCAC  62 285
CXD87_RS01480  294156 ..  294199 +  -8.1  -3.33814   CGGCGCGGCGCGAGC CGCCGG-CCTGAGGCGCCGGCG GGG CGTCG-TGCC-CGGATCCGGCG TATTATCTAGCGTTT  56 15
CXD87_RS01485  296254 ..  296280 + -11.5  -2.74488   TGTCCTGATTCACAG        GCCCGCG-CGGC CAGC GCCGGCGCGCGC         TGATTCGCGTCGTTG  62 176
CXD87_RS01495  298795 ..  298814 +  -7.8  -3.35679   TGATGCCCAGCTCCA            GCCCGATC AGGT GATAGGGC             TTGTACATGGCCGAA  59 391
CXD87_RS01520  303339 ..  303370 + -10.1  -3.05384   TCCACCTTGAGCAGC      GGCAGCCGGCCCAC GTCCA GCGGGTC-GCTGCC      TTCGGTGCGCAGCAG  59 344
CXD87_RS01540 NONE
CXD87_RS01545 NONE
CXD87_RS01550 NONE
CXD87_RS01555 NONE
CXD87_RS01560  310347 ..  310374 +  -9.1  -4.07568   TCCCGAAGTCTTCCT        TC-CTGCGCCGG CCTGT CCGGCGCAGCGC        TTTTGGGGACGGCAC  75 56
CXD87_RS01575 NONE
CXD87_RS01580 NONE
CXD87_RS01585 NONE
CXD87_RS01590 NONE
CXD87_RS01595  318578 ..  318596 +  -3.1   -3.4247   ATCTTGGCGTGCGTC            TG-GCGGG CGCG CTCGCTCA             TGTTGTTGACGTTCT  47 336
CXD87_RS01620 NONE
CXD87_RS01625 NONE
        ruvX NONE
CXD87_RS01635 NONE
CXD87_RS01640  326570 ..  326584 +  -2.7  -2.82516   CAGCCGCAGCGTGCA               CACGC CGTTC GCGGG               TATGATGCTGCCCGG  41 64
CXD87_RS01645  327390 ..  327426 + -16.4  -3.06831   TCGCCGGCGAGCTGT    AGCCGGCCCGGGCGGC GCGTG GCCGCCCGCGGCGGCG    TTCAGTCGCCGTTGG  79 24
CXD87_RS01665  331717 ..  331741 +   -15  -3.16492   TCATCCTCCGGTTGC         CGCCGCGCGGG CCGT CCCGC-CGGCG          TGTTGCTGGCTATCC  76 408
CXD87_RS01710 NONE
CXD87_RS01715 NONE
CXD87_RS01720  340859 ..  340881 +    -9  -2.71681   CGCGCAGCAGCCGGT           CGCCGGCGGC ATG GCCGTGGGTG           TCATTGACCGACTTG  52 361
CXD87_RS01745  344572 ..  344582 +  -2.4  -2.82519   CCAGCGTGTCGCACC                 AGCG CGC CGCC                 TGATTGATGTCATGC  39 190
CXD87_RS01790 NONE
CXD87_RS01795 NONE
CXD87_RS01800 NONE
CXD87_RS01805  355087 ..  355121 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS01825  359295 ..  359319 +  -7.8  -4.96388   CTGAAGCGGCGTCGC          GCCCGGGG TGCGGGTTT TCCCGGGC          TTTTATTTAGTGCTT  86 37
CXD87_RS01830 NONE
CXD87_RS01835 NONE
CXD87_RS01840  362149 ..  362165 +  -3.6  -2.62157   CAAGAAGTAGACGCA              CCCTGG AACGG CCATGG              CTTATCGCATTCATC  40 31
CXD87_RS01845  363216 ..  363243 + -15.6  -2.56596   TGCCCGGGGTGCCGG        GGTGCCTGTCCC AGCG GGGACAGGCACA         TGGATTCCTGCGGGG  74 69
CXD87_RS01850  364196 ..  364224 + -10.1  -4.11216   GCAACAAGCGGCGGG        GTTTGCCGGCGCG GCT CGCGGCGGCGCGC        TTTTCGGCATGCCGC  78 94
CXD87_RS01855  365813 ..  365829 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD87_RS01870  368060 ..  368089 +  -4.1  -4.29738   ACATAGTTGACGTAG       TTGCCGGCGCCGT GGCC GTGGCGCACGCAG        TTTTCGTGGATATCG  67 144
CXD87_RS01885  371437 ..  371466 +  -2.7   -4.8622   AGGAGCTCGTCCCCA       CGGGGACTGGCTCC CGA GGGATCAG-CCCAG       TTTTTCCTTCAGCAG  77 118
CXD87_RS01905  376092 ..  376120 +  -4.5  -3.35679   GGCGCGGCCCGCGAA       GCAGCTGCGGGC AGGCAG GCCCG-GGCTGA        TTATCCATGCAACGA  51 79
        mreC NONE
        mreD  377550 ..  377575 +  -3.9  -3.09492   GACGACGTCGAATCT         TCCG-CCGTCTG ATC CGGGCGGGCGCA         TGTTCGAATTCAAGA  45 14
        mrdA NONE
        rodA  381131 ..  381178 +  -4.6  -3.61715   CCCTGCGCATCGATC AGCGCGC-CGTCGGGGGCCGG CTCGCCC CTGGCCGCCAGCACGCGCGCC TTGTTGACCGCGATC  54 496
CXD87_RS01955  387254 ..  387292 + -11.9  -4.42788   TGGTGGCCCAGAACT  TCACCA-GCACGACCTTGC CGC GCA-GGTCCTGCATGGTGA  TTTTCTGGCCTTCGA  88 498
        rsmI NONE
CXD87_RS01985  391026 ..  391060 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS01995 NONE
CXD87_RS02000 NONE
CXD87_RS02005  394318 ..  394349 + -15.9  -4.25104   GGCTGAGCGCCGGCC      CGGGTGCCTGTCC CCGCGC GGACAGGCACCGG       TTTTCCTGCGGGGAC  95 35
        trxB  401093 ..  401103 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS02040  402384 ..  402405 +  -8.7  -3.18582   GCGCCACCAGGCCCA           CCGCCTGCGT ATC GCGCAG-CGG           TTGGTAGCTGAGCTG  56 269
CXD87_RS02100 NONE
CXD87_RS02105  415008 ..  415022 +  -2.7  -2.62184   TGACGCCAGGGAACT               GGCGG GCACG CCGCA               TGGTCTGAGCAGAAG  39 38
CXD87_RS02110  416421 ..  416431 +  -5.4  -3.37533   AGAAGAACGCGTGCA                 GGAA GCG TTCC                 TTGATGGTTTTGGGG  49 438
CXD87_RS02125  417825 ..  417880 +  -9.8  -3.13403   CCAGCACCAGCCAGA GGC-T--GCGCCGC-GCGTCGGCAAAGCG CGC CGCCTGGCCG-CGCAGCGGCGCGTACGCC TCTTCGTCGGCCGCC  60 53
CXD87_RS02140  421084 ..  421094 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 54
CXD87_RS02145  422223 ..  422260 + -10.6  -3.53224   GCCGGTCATGGAGCA  GCC--GGCCAGGCGC-ACG CGC CGTTGCGCCCGGCCACGGC  TTTCGCGCAGCGCTA  70 123
        gltS  423520 ..  423531 +  -4.4  -3.16881   GCCGTTCGTGGGAGG                CATG TGAC CATG                 TTCATCCGCTGGCTC  47 19
CXD87_RS02155  425464 ..  425478 +  -2.1  -3.14931   GATCACGATGCCCGC              GCC-TC CCTT GATGGC               TTCGTCCAGGCTGGC  43 455
CXD87_RS02185  431434 ..  431446 +  -6.9  -3.29144   GAACACCAGGGCCTT                GGGCG CGA TGCCC                TTGTGCAGCAGGTCG  52 187
CXD87_RS02210  435008 ..  435021 +  -4.5  -3.53733   AGGCCTGAACAGCGC               CCGGT GATC ACTGG                TGTTTATCACCTCCG  52 33
CXD87_RS02215  437223 ..  437238 +  -6.8  -3.03124   CGGTACGCCGAACTG              CTTGCG CGTG CGCAGG               TATTCCGCCGTCAGC  48 408
CXD87_RS02255  445646 ..  445704 +  -7.5  -2.70932   GCTGCATGAAGGCCT CCAGCACGCGACGCGGCCTGGGCACGGGG ATCCA CGCCATGCCCAGGC-GCAT-G-G-GCTGG TGCTTGCCGGCCAGG  49 189
CXD87_RS02275  450887 ..  450897 +  -2.4  -3.17075   GCGGGACGGCCATGC                 ACGG CGC CCGA                 TTGCGTTGCCCACCA  42 42
CXD87_RS02280  451932 ..  451945 +  -3.7  -2.56596   AACCATCGCCAACGT               CGCCG ACAT CAGCG                TCGATTGATCGACAC  40 4
CXD87_RS02285  453167 ..  453179 +  -4.7  -4.20696   GGGACAGCCTCCCTG                ACCGG CCG CCGGC                TTTTCCCCTTACTCC  66 202
CXD87_RS02295  455900 ..  455914 +  -2.1  -3.17075   CAATAAAGCACCTGG              C-AGGC AAAG GCCTCG               TTGAGTTCCCACAGA  43 267
CXD87_RS02310 NONE
CXD87_RS02315 NONE
CXD87_RS02320 NONE
CXD87_RS02325 NONE
CXD87_RS02330 NONE
CXD87_RS02335  468437 ..  468447 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS02340  469430 ..  469469 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD87_RS02345  470576 ..  470607 + -12.2  -3.03338   TCAGTTCGAAGGTGC      GCAGGCGGGCCAGG CGCG CCTGCTCCTCCTGC       TGTTCGCGGACTTCT  67 101
CXD87_RS02355  472525 ..  472551 + -11.5  -3.58231   GACCCCGCCTTCGCG         GCGGGCGTTCG TGCGC CGGGCGTCCGC         TTGTGTCCATTCTTT  72 53
CXD87_RS02360  473672 ..  473682 +  -2.4  -3.14344   CGATCTGTGATGCGC                 GGGC GAT GACC                 TTGCTCAAGGACCTG  42 31
        prmC NONE
        grxD NONE
CXD87_RS02375  475445 ..  475471 + -22.4  -3.64703   CGCCTGCCTGTACCT         GAAGCCTGCCCC GAT GGGGCAGGCTTC         TTTGCGTACGGCCGC 100 53
CXD87_RS02380 NONE
CXD87_RS02385 NONE
CXD87_RS02390 NONE
CXD87_RS02395  481419 ..  481434 +  -3.2  -3.17685   GGGGAGTTTGTCGAT              GGAGTT CACT AACACC               TTCCATGTGTCCTTG  44 14
CXD87_RS02400  481941 ..  481989 +  -7.9  -3.14132   CGCGGCGCCTGTAGC CGCGGCC-GCGCCCGCGGGCAG CGTGGT CAGCCCGGATGCGCAGGCTGTG TTGCTGCAGGCGCAG  54 130
CXD87_RS02405  482229 ..  482253 +  -7.8  -2.91582   TTCCGATACGCGAGG         CGCCTG-TCCC GCAT GGGAACTGGCG          TCTGTCCGTGCAGTG  52 61
CXD87_RS02430  487393 ..  487436 +  -9.5  -3.44222   CGGTAGGGCGGGGTT CGGTGTGGGTGCCAGTCCCC GCAAG GGGGACAGGCA-CCGTGGCG TTACTTGCTGCTTTG  63 35
CXD87_RS02475  494854 ..  494884 +  -8.2  -3.53012   CTTATCCCTGATCCC      GGCGCTGGCC-GC CATGGC GCTGGCAGGCGCC       TTTCCCGCGCCGAGC  62 194
CXD87_RS02485  497934 ..  497950 + -10.8  -2.73875   GAAGGTCCTGACCGG              CGCGCG GGTGG CGCGCG              TGGTGTTCCAGAACC  60 372
CXD87_RS02495  500323 ..  500340 +  -8.3  -3.90112   GACAGGGCAGGGCCG             CGCCGCC GCCA GGCGGCC              TTTCCTTGAAAAACC  70 41
CXD87_RS02500 NONE
CXD87_RS02505 NONE
        aspS  503334 ..  503366 +  -9.8  -3.64703   GCCAGCGGCCGGAAT     CGGGC-AGGCCGGGC AATG GCGTGGCTTCGCCCG      TTTCGATAACGCGCC  70 81
CXD87_RS02515 NONE
        clsB  505539 ..  505551 +  -6.2  -3.14132   CGCCGGCCAGGATGC                GCGG CGTCA CCGC                TTCGTCCAGGAACCA  50 111
CXD87_RS02545  510503 ..  510546 +  -8.1  -3.18199   CGAACCGCTGCAGTA AAC-C-G-CGGCGTCCGCCGGC CTC GCCGGCGGACGCTGTCCGCGCC TTGCCTTGCGCCTTA  54 25
CXD87_RS02550  511911 ..  511935 + -10.7  -2.71011   ACGCCGCCTGAAGCG         CGGCGGCCGC CAGCCC GCG-CCGCCG          TGCTTCAGCCGGCGT  60 30
CXD87_RS02560  513963 ..  513993 + -10.3  -3.43446   GGGGCTGGGGCAGCA       GGCCATGCGCGCG CGCAA CCCGCGCCTGGTC       TATTGTTCGGTATCG  65 374
CXD87_RS02570  515702 ..  515720 +  -8.1  -3.47227   CGCGTCGGACAGGCC            GGCGC-CG ATGC CGCGCGCC             TTGTCGTCCTTGCCG  58 209
CXD87_RS02630 NONE
CXD87_RS02635  528409 ..  528436 +  -7.6  -3.22884   GCCCCCTTACCGGAA        GTC-CGGCGCGCG CTT CTCGCGCAGCGAC        TTGATGCCTTCGTGC  56 114
CXD87_RS02645 NONE
CXD87_RS02650  530660 ..  530691 + -13.1  -4.20516   CTCGCGGCGCCGCCG      CGTTGCGTCTGGCC TGTCT GGC-AGACGCGACG      TTTCTTCCGTCCCCC  91 149
CXD87_RS02660  533544 ..  533575 + -17.2  -3.53012   TGGCCCAACCTATCT      GACCGGCCGGGCCG GCGA CGGCCGGACCGGTC       TTTCGAAGACCACCA  89 24
CXD87_RS02665 NONE
CXD87_RS02670 NONE
CXD87_RS02675 NONE
CXD87_RS02680 NONE
CXD87_RS02685  539322 ..  539349 + -21.4  -3.62597   TGCACCAAGGGCGTG        GGTGCCTGTCCC CGTG GGGACAGGCACC         TTGTTCCCCCCTCCG 100 56
CXD87_RS02765  556468 ..  556492 +    -7  -3.01791   GAACAGGTTGAAGTA          GCTGGCCGCG TCCAT CGCCGCCACC          TGTTCGGCCGGCGAT  51 234
CXD87_RS02780 NONE
        folB NONE
        ttcA  562583 ..  562593 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS02800  563723 ..  563742 +  -3.4  -3.30124   CGTTCACATAACCCA            GGTGCGGC GTAA GCAGCACG             TTGTCCAGCGTGCGC  47 151
CXD87_RS02830 NONE
CXD87_RS02835  570055 ..  570080 +  -6.7   -4.7497   GAAGTGCAGCGCCAA         GCCCGGAACCCG TAA CTGGA-CCGGGC         TTTTTGCTGCATGCC  84 212
CXD87_RS02840 NONE
CXD87_RS02845 NONE
        trpD NONE
        trpC  574136 ..  574168 + -12.6   -3.8186   CCGGCCTCAGCGGCC     GCTGCCG-CGCGCCG GCGC CGGCGCGCCGCCCGC      TTCTTCCTTGCGATG  81 55
CXD87_RS02870  577999 ..  578031 +    -9  -3.04322   GGGCGGTCTGGAACA      TGACGCTGCGCGCC TGCTC GGCGCGCATGGCCA      TCTTGGCCAGTTGCC  57 46
CXD87_RS02880  580191 ..  580232 + -10.1  -2.78463   ACAGCACCAGCGATT CGATGTC-GCTGCCCACCTG GGT CAGGTCGGCGGCCGTCATGG TGTGGTCCACGCGCT  56 113
CXD87_RS02915  586446 ..  586481 +   -19  -3.14132   GCGTGCTGGCGTATG    ACGGGGTGCCTGTCCC CGCT GGGACAGGCACCCGGA     TTCCTGCGGGAAGAG  90 76
CXD87_RS02930 NONE
CXD87_RS02935  590891 ..  590909 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 202
CXD87_RS02960  600155 ..  600174 + -12.8  -5.60993   TTACAGGTAAAAAAA            CCGCTGGC CCTT GCCGGCGG             TTTTTTTATGCGCGG 100 51
CXD87_RS02970 NONE
CXD87_RS02975  603979 ..  604035 + -16.4  -2.80398   AGGGACGTTGCGCGC CGGCGTCCCG-TCCCGGGTGCGGCGCC TGGC GGCGCCGCACCCCGTATCGAGTTGCCA TGCTTGCATTCATTC  77 49
CXD87_RS02980  605389 ..  605438 +  -6.4  -3.73775   GCCGCGCCCGCCCAG CAGGCGCGCGCCGGCGCCGC CCATCTGGACAT GCGGCG-CGGCGT-CGTCGG TTTCGTCGGCGTCGG  59 171
CXD87_RS02990  606776 ..  606831 +  -2.5  -4.45175   ATACGTCTACACGAT GAACCGTGTCG-GCAAGATCGTGCCGC CCAA GCGGCA-GATCCTGCGCGACATCTCCC TTTCCTTTTTTCCTG  67 143
CXD87_RS03005  609281 ..  609296 + -11.8   -4.7497   CGCCTCAACGAGAAA              CCCGGC TTCG GCCGGG               TTTTTCGTGGCTGCC 100 66
CXD87_RS03010  610630 ..  610668 + -20.3  -3.25113   CGGGGACCAAGATTC   AGCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGAG   TATTCAGTTTTGCGG 100 68
CXD87_RS03035  616429 ..  616456 +  -9.2  -2.61582   GTATCCGCGCCCGCA        CCG-AGATCAAGC CGC GCTGGATCTTCGG        GTTCTGGGTGGGGTC  54 390
CXD87_RS03060  621725 ..  621736 +  -7.2  -3.95456   GCTAGCCAGTTCCCG                GGGC CGCG GCCC                 TTTCCTGTTCCGTTT  66 36
CXD87_RS03065  623058 ..  623100 + -14.1  -2.78384   CGGTTTCGAGCAACT GGCGCTCGTCGGGGCCGATG TGGC CGTCGGCCTTGGCC-GCGCC TATCATGGCCACCAG  67 302
CXD87_RS03075  624185 ..  624203 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 214
CXD87_RS03100  629246 ..  629259 +  -2.3  -3.02166   GCCGACGATCCGGGC               CGGTG ATAA TGCCG                TACTTTCATTCCGGC  41 20
CXD87_RS03105  629927 ..  629961 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS03140 NONE
CXD87_RS03145  639087 ..  639099 +  -9.1  -3.02511   TGCCACAGCACCACG                TCGCC GTT GGCGA                TATTGAACGCCTCGC  55 368
CXD87_RS03180 NONE
CXD87_RS03185 NONE
CXD87_RS03190 NONE
CXD87_RS03195  647678 ..  647731 +  -4.3  -2.94144   GCGCGGGGGGTGCAC TGATGATCCGCCTGCCGCTGCGCCGC GCC GCGCTCCTGCCGCTGGCCG-TCATCG TCCTTTACCTGCCGG  44 23
CXD87_RS03200 NONE
CXD87_RS03205 NONE
CXD87_RS03210 NONE
CXD87_RS03215 NONE
CXD87_RS03220  653010 ..  653046 +  -7.9  -3.85698   CATCGATGACTTGCG   CGTGCTGCGCGCCGAC GCGCTG GCCGGC-CGCAGCGCC    TTTGTCAGCGGCGCC  66 110
CXD87_RS03230  654819 ..  654833 +  -3.4  -3.78934   GATACCCGCAACGAT               CCCCGG CTT TCGCGG               TTGTTCTCCAACCGC  56 202
CXD87_RS03240 NONE
CXD87_RS03245 NONE
CXD87_RS03270 NONE
CXD87_RS03275  665405 ..  665432 + -11.4  -4.50976   GTAGCGCCCCGGAAA        GCCCGCATAAACT TCA GGTTT-TGCGGGC        TTTTCTCATCTGGAC 100 63
CXD87_RS03280  665957 ..  665976 +    -7  -3.08679   CCGTAGCTGAAGAAC            GCGTCAGC GAAG GCGGGCGC             TATTGCATCGAGCCG  52 35
CXD87_RS03295  667033 ..  667043 +  -3.2  -3.41602   GGGTGATGGAATGAA                 TGCC CTG GGTA                 TTGTGATACCATGCA  48 27
CXD87_RS03300 NONE
CXD87_RS03305  668457 ..  668490 +  -4.6  -4.36411   CCAAGCTGATTACCG    TCCACAACCCGGTTGT CTGA GCA-CCGGGTCG-GGA     TTTTCGTCATTCATG  69 6
CXD87_RS03310 NONE
CXD87_RS03315 NONE
        ureC NONE
        ureE  671832 ..  671859 +  -6.8   -3.1372   GTTGCATCTGTCTTC        GCCGGCGCTGCC GATC GGCGGCTTCAGC         TATTCGTAGGGCCTG  52 62
CXD87_RS03330 NONE
        ureG  673223 ..  673263 +  -8.7  -3.58726   GCTTGCCGAAGATTC  CCGCGCACGCGCTTGCTCG GTG CGGGCCGGCGCGCCTGCCG  TTATATATAGAGGAC  62 99
CXD87_RS03380  686248 ..  686265 +  -9.1  -3.16564   CAGGGCAGGGCGTTG             TCGCGTC CGAT GACGCGG              TTGGTCGAATAGGCG  56 422
CXD87_RS03400  689036 ..  689059 + -16.8  -6.06723   CCTTTGGTGGATTTA          GCCCGAGATC GCAA GATCTCGGGC           TTTTTTTTTCGCCGC 100 465
CXD87_RS03405  690505 ..  690515 +  -6.8   -3.1506   CATACAATTCCGTAG                 CCGT CAC ACGG                 TTGATAGGGAGATTT  52 102
        tviB NONE
        tviC  692829 ..  692841 +  -4.8  -3.51232   CCATGCCCTGGTACA                CGCA ATTCC TGCG                TTGATTTGAAAGCCA  52 9
CXD87_RS03420 NONE
CXD87_RS03425 NONE
        asnB NONE
CXD87_RS03435 NONE
CXD87_RS03440 NONE
CXD87_RS03445  701022 ..  701049 +    -9  -2.60571   GCCAGGATCTCGGCC        TGCTGCGGGTCG GACT CGACCAGCCGCG         CTTCCTTGAGCGCTT  51 325
CXD87_RS03460 NONE
CXD87_RS03465 NONE
CXD87_RS03470  706796 ..  706821 +  -3.1  -3.54543   GGCTGGCGCTGCCGG         CGGGTGGCGCA TGAG TGCACGGCCTG          TTTCCGGCAATGGAT  49 12
CXD87_RS03475  708190 ..  708216 +  -5.9  -5.40072   ATTTGACATCGATTT        GACGCCCAA-CA GGTA TGCTTGCGCGTC         TTTTTTTGCAACGAG  95 87
CXD87_RS03480  710429 ..  710448 +  -7.1  -3.16564   CGCCCCAGGGCAGGT            CGAGCGGC TGCTT GCCGC-CG            TTGGTCAGCTCCAGC  53 285
CXD87_RS03495  714212 ..  714238 + -10.8  -3.18582   GGCCAGCAGCAGGAT         CAGCGCCGCG TTCAGCT CGCGGCTCTG         TTCGTCGCTGAGGTC  64 131
CXD87_RS03520 NONE
        lolB  720491 ..  720507 +  -6.5  -2.52896   CGGCGGTCTAGAATA              GGGGC ATCCCCA GCCCC              TCGCTTCCGCCGTGA  45 46
CXD87_RS03530 NONE
CXD87_RS03535  721514 ..  721556 +  -4.2  -5.79595   CCAATACATAAAAAA GCTGTTGAAC-G-CGCCCGT CAGAC ACTGGCTCCAGTTCAGCAGC TTTTTTGTTTTACGA 100 43
CXD87_RS03540  722633 ..  722657 + -12.8  -4.07885   GCGGCGCGCAAAAAC          CACGCAGCGC ATGTC GCGCCGCGTG          TTTTAACCGGCGATC  83 81
CXD87_RS03545  723368 ..  723406 + -24.8  -2.91695   CGTGCCCGACGTCCC   CGAAACCCTGCGCATGCG ATT TGCATGCGCAGGGTTTTG   TACTTTACAAATACG 100 79
CXD87_RS03550 NONE
CXD87_RS03555 NONE
        ychF  726035 ..  726053 +  -6.7  -3.05816   TGGTGGACAGATTGG             CCCGTTG TAAAT CAATGGG             TTGCATAAACAATAC  51 78
CXD87_RS03565  727431 ..  727458 + -16.4   -3.4285   GCGAAGTGGGTAGAA        CGGCCTTATCCT TTTC AGGATAGGGCCG         TTGTCCCTTGAGTGC  85 67
CXD87_RS03570 NONE
CXD87_RS03575 NONE
CXD87_RS03580 NONE
CXD87_RS03585 NONE
CXD87_RS03590  736206 ..  736219 +  -3.1  -2.79183   TGGTGACCTTTTCGG               CGAGAC GGA GTC-CG               TATGATACAGATAGC  40 7
CXD87_RS03595 NONE
CXD87_RS03600 NONE
CXD87_RS03605 NONE
CXD87_RS03610  738484 ..  738503 +  -6.4  -2.64243   ATTCCAGCACCCAGA            CGCGCAAT GCCG ATTCCGCG             TCATGTCCGATATGG  46 379
CXD87_RS03620 NONE
CXD87_RS03625  740362 ..  740376 +  -3.5  -3.72893   CGCGTTGCTCTGTCG               TGGTG ATGGG CACCG               TTTGCTCCCGACCTC  54 436
CXD87_RS03655  748494 ..  748521 + -10.5  -3.08679   GCCAAGCGCGGCGCC        GGCG-GCGCGCC GGCCG GGAGCGCTCGCC        TATTGCCTGGCCCCG  62 49
CXD87_RS03665  751074 ..  751101 + -13.4  -3.34398   GCGCAGTTCTTCATA        TCGGCTGCTGCC GCGC GGCAGCAGCAGG         TCTTTCCAGGCGGCA  74 237
CXD87_RS03695  756269 ..  756287 +  -4.6  -2.78596   CAGAAAATATATATA             CCTACA GAAAACA TGTAGG             TATAATCCGAACATC  43 85
CXD87_RS03700 NONE
CXD87_RS03705 NONE
CXD87_RS03710  759984 ..  760002 +    -3  -3.01001   CCCCTCGCATACAAC             GACAAGGA GAC TCCATGAC             TGTCATTTCCCGCTA  42 163
CXD87_RS03715  761018 ..  761058 +  -4.7   -3.2794   AACTAGGCTTGCGGG TGGCTACCGGG-TGCGGGCC GCAA GCCCCGCAGCCCGGC--CCA TTGGTGTCCATGGAC  49 35
        modA  762191 ..  762235 +  -9.2  -2.64616   CCCTGCTCAAGGCCT GGTCGCCGGCGCTGATCC TGCTGAAAT GGATCGGCGGCGCCTACC TCGTCTACCTGGGCA  54 302
CXD87_RS03730 NONE
CXD87_RS03735 NONE
CXD87_RS03740  764305 ..  764333 + -11.6  -3.30771   TCGACATCGGCTCGG        CCGGCCGCGTGG AAGTG CTGCGCGGCCCG        TTCTCGGCCCTGTAC  68 419
CXD87_RS03750  766631 ..  766642 +  -7.2  -5.30616   CAGTCCATGAACCAC                CGCC TTCC GGCG                 TTTTTATTTCCCTCG  95 113
CXD87_RS03755 NONE
CXD87_RS03760  767188 ..  767214 + -13.7  -3.09831   GTCGGTCTCGCCCCA        TGACGGCCGCCC CCCG GGGCGGCCG-CG         TCCTTTTGCGGTACG  73 51
CXD87_RS03770  768813 ..  768829 +  -5.7  -4.36914   AGGTCCGCTAAGCGG              GCGGGGC GCG GGCCTGC              TTTTGTGGGCGCGAC  72 30
        modA  769709 ..  769719 +  -2.4  -2.61264   CTGTAACCCCTTGCA                 GGAG TCC CGCC                 CTTGTCGCTGACCAG  38 35
        modB NONE
        modC  771891 ..  771914 +  -5.2  -3.72576   CCCTGCCCTGCGGCT          TG-GGCCCGGC GTA GCTGCGCCGCA          TTTCGTAAAGCCGCA  58 394
CXD87_RS03800  775393 ..  775414 +  -6.5  -2.87132   TTTCCCTTGTTCGGC           CTGGCGCAT GCAT ATGCGCCGC            TATATGCGGCAAGGA  48 257
CXD87_RS03805  777133 ..  777183 +  -5.1  -2.50034   CGGCTAAGGCCTGAC CCAACCGGACCAT-GCGGCGCGGG CCTG CCCGCGCCGCTGCGCTCCACCGGG CGTTTTCCCTTCATG  44 34
CXD87_RS03810  778446 ..  778463 +  -9.1  -3.14132   AGCGCCTGCAAGCGC             GCCTGGCG CAG CGCC-GGC             TTGATGCGCGCCGGA  56 68
CXD87_RS03825  782337 ..  782361 +  -8.4   -4.1899   GCGCTGAACACGCCA          ACCCGGGCGG CCCGT CCTCCCGGGG          TTTTCCCTAGGGTCG  76 34
CXD87_RS03830 NONE
CXD87_RS03835  785025 ..  785040 + -11.8  -5.18357   TGTCCATCCGGAAAA              GGCGGC CGCG GCCGCC               TTTTTTCATGCCTTC 100 50
CXD87_RS03840  786269 ..  786303 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 259
CXD87_RS03880 NONE
CXD87_RS03885  794776 ..  794794 +  -2.2  -3.57263   ACTGAAACGGCGGCC             ATCCCGGG CGT CCAGGGGC             TTTCCGCGTCGGAAT  48 36
CXD87_RS03890 NONE
CXD87_RS03895 NONE
        xerC  797844 ..  797879 +  -8.9  -2.80816   AGCGGTGCCGGACTT    CGC-CCTCGACGCCGG TGAAC TCGGCGTCGCGCTGCG    TGTACTCGATCAGGC  52 436
CXD87_RS03935  804654 ..  804680 +  -3.8  -3.93556   GCTCCGTCCCCTCTT         GAAGATGG AAATTCCGCCC CCATCTTC         TTTCGTTGCATCGAT  59 76
CXD87_RS03940  806098 ..  806114 + -10.1  -2.57795   AGCCAGGCGCGAATA              TTCGGGC CGC GCCCGGA              TCGATTCATAGTGGA  57 128
        dksA  806653 ..  806676 + -13.2  -5.07652   CCGAACGCATTACCA          GGGCTATGCT CCAC GGCATAGCCC           TTTTGTTTTCGGACC 100 76
        hslV NONE
        hslU  808627 ..  808652 + -11.9  -3.81027   CGGCAGCCAGGACCT         GGCC-CGCTACG TGC TGTAGCGCGGCC         TTTCCCTTACTTGGA  79 7
CXD87_RS03970  809988 ..  809998 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD87_RS03975  810981 ..  811020 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD87_RS03980  812390 ..  812407 + -11.3  -2.56596   TTGGCCCTGGCCAGG             CAGCGCA TCGA TGCGCTG              TCGCTTGATGCGCGC  59 364
CXD87_RS04015 NONE
        zapA  819572 ..  819586 +  -2.8  -2.95102   CTCGCGCGCAGTATT               CATGCA GTA TTCATG               GTTTGTCCCTGCCGT  42 55
        ssrS  819776 ..  819810 + -12.3  -3.05993   CAGGCGGGGCATCTA    TCC--AGGCAGGCCTGT ATC GCAGGCCTGCCTTCGGA    TGTCTCTCTCCCTCC  67 27
        ilvD NONE
CXD87_RS04050 NONE
        msrA  825574 ..  825605 + -10.8  -3.69256   GGATGCCTTCGCCGC      GGTACAGGTCCAGG TATT CCTGGATCTGCCCC       TTCTCTTCGGTGCCT  74 458
CXD87_RS04065  827214 ..  827228 +  -4.9  -3.56643   GCGACGAAGCCGGAA               CCGCG AATCA TGCGG               TTTGCAGGATCTCCG  52 289
CXD87_RS04070 NONE
CXD87_RS04075 NONE
CXD87_RS04080  829673 ..  829711 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CXD87_RS04085  832936 ..  832946 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf  833121 ..  833155 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CXD87_RS04095  834098 ..  834118 +   -14  -4.54727   CGGTTCCGCTCGCAA            CGGCTGGC TTCGT GCCAGCCG            TTTTCGTTTGCAGGC 100 56
CXD87_RS04105 NONE
CXD87_RS04110  837354 ..  837408 +  -9.9  -3.56862   TCGCGCAGATCCCAG GCGCTCAGCCGTGCCGCG-CGCACC GGCTTGG GGCGCGCCGCGGCG-GGCTTGGCGG TTTCGGCGGGTTTCT  67 285
        rnpB  839482 ..  839502 + -19.7  -2.52464   TGCATTTTCATGACA            GCCGGCCGG AAT CCGGCCGGC            TGGCTTACGGCGCCC  93 41
        mraZ NONE
        rsmH NONE
        ftsL  841543 ..  841564 +  -6.5  -4.16016   AACCAGCCCGCCGGA           GGCGCCCAGT GAG GC-GGGTGCC           TTTCTTCGACAATCC  66 14
CXD87_RS04140 NONE
        murF NONE
CXD87_RS04150 NONE
CXD87_RS04155 NONE
        ftsW NONE
        murG NONE
CXD87_RS04170 NONE
CXD87_RS04175  853412 ..  853424 +  -3.3  -2.87132   CGGCGCGACAAGATT                GAACG GGA CGCTC                TGTGTGGAACGACGC  41 24
CXD87_RS04180 NONE
        ftsA  855580 ..  855591 +  -3.6  -3.55622   CCGTTGCGGACCACG                GTCG GCTT CGGC                 TTTGAGGCGATTCAC  51 127
        ftsZ  857036 ..  857047 +    -3  -3.63968   CCGGTTATGCCGGTG                TCTA TTGG TAGA                 TTTCCGGCTTTCGCA  53 210
CXD87_RS04195  858030 ..  858058 + -14.6  -4.57073   CGATATCGGTTTTCG        TCCTATGGCCGC GCTGA GCGGCCATAGGC        TTTTTGGCGGGGATG 100 52
CXD87_RS04205  859689 ..  859714 +  -5.4   -3.5394   CACGGCAGGCCGTTG         CGGTCCAGGT GCGTTA AACTGGATCG          TTTCCCGGCGGGTTT  54 77
        secA NONE
CXD87_RS04215  863424 ..  863437 +  -5.9  -4.19704   TGCGTGATCCATGGA               TGGCC GGCA GGCCG                TTTTCACTGACCTTA  70 161
CXD87_RS04220  864800 ..  864831 +  -8.6  -2.82635   GGCAATGGTGAAGCT      GCCGTGCGGGTCGGC GTA GGCGACGTGC-CGGC      TGTAGTGATCGGGAT  53 368
CXD87_RS04230  865933 ..  865955 +  -4.8  -2.57132   GCGCACGCGCGGCGC           GGGCGC TGCGGCATAAT GCGCCC           CTTATCGAAAAGGGC  42 10
CXD87_RS04235 NONE
CXD87_RS04240  867791 ..  867822 +  -4.3  -2.62396   GGCGTGCGCCGTGAA      CGGGTTTTGCCTG GCGGGG CATGCCAGGCCCG       TCATCTCGCAAGGTA  42 79
CXD87_RS04245  868715 ..  868733 +  -6.7  -4.37092   ATGCCCAGGCGGGTA            TCGG-CGC CGAT GCGGCCGA             TTTTCTGGAAACCAT  72 212
CXD87_RS04285  876471 ..  876484 +  -5.9  -3.20991   CTGGATCGCAGCGTG               GCCGG CCTG TCGGC                TTGAATTCGGTTGGA  51 8
        aroQ NONE
CXD87_RS04295 NONE
        accC  879293 ..  879343 +  -8.8  -2.55668   GTGCCCAGCTGGCAC CGCGACGACCCCGCCGTGCCGGGC CTGGT GCCCGACGCCGCGCG--CGACGCG ATTCATATCGAACTC  52 422
CXD87_RS04310 NONE
CXD87_RS04315 NONE
CXD87_RS04320  882611 ..  882629 + -13.1  -5.40072   CTGCTTCCGGCAAGA             CGCCCGC TTCAT GCGGGCG             TTTTTTTGCGGCGGC 100 48
CXD87_RS04325  883127 ..  883164 +  -4.8  -2.78384   CCTGCTGTCCCACCT  GGCCGCGATGGCAAGCGC CGTC GCGCT-GTCGCTG-GGCC   TGTACTGGGGCGCCG  43 44
CXD87_RS04330 NONE
CXD87_RS04335 NONE
CXD87_RS04340  885522 ..  885537 +    -6  -2.56838   AGTCCTATCTGATCC              GCCGGG AGTG CGCGGC               ATGTATTTCGATCTA  46 29
CXD87_RS04345  886985 ..  886997 + -10.5  -3.53091   CAGCGATTCCGGCGG                CGGCG TAG CGCCG                TTTCAGACGCCGAAT  67 18
CXD87_RS04375  896591 ..  896606 +  -3.3  -3.53012   GTAATCCCTATAATG              CGAAA CAAATA TTTCG               TTTGCGGCGAAAACA  49 155
CXD87_RS04380  897246 ..  897260 +  -5.6   -4.6951   GTCGGCAGTCCGGCA               CGCGGC GCT GTCGTG               TTTGTTTTGCGTGGT  77 185
CXD87_RS04385  897816 ..  897871 +  -3.3  -3.40522   TTGTCGCCAGCGGCG CGCCAT-TCGGGTA-AGGTGGCGGACTT CCC ACGTC-GCCGCCGCTACCCGCCATGTCG TTGTCGTCCGAAAGT  48 44
CXD87_RS04390  899311 ..  899333 + -11.2  -3.01712   TCAGGTGCTGGGCCG           CCAGCTCGGC GGG GGCGGGCTGG           TATTCGCCGCAGAAC  62 283
CXD87_RS04400  903224 ..  903258 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS04420  906672 ..  906682 +  -2.4  -3.78934   TCTTTCGCGATCCTC                 TGCG ATC CGCC                 TTATTGTGACCAACA  54 126
        dbpA  908056 ..  908070 +  -4.2  -3.28712   CGGCGGTTCCGCATG               CGCTTC CTG GAAGAG               TTCTGAGCGCGGCGG  47 5
CXD87_RS04430  909067 ..  909096 +   -12  -3.16564   CAGACCACGCTGCCG       CCGGCGGCGCGC ACCGCG GCGCACAGCCGG        TTGATGGGCTGCACG  68 521
        pmbA  914883 ..  914908 + -19.1  -3.02096   GCCGGCGCCGGCAGG         GTGCCTGTCCC CGTG GGGACAGGCAC          TGTCTCGTTCATGGC  90 51
CXD87_RS04470  916316 ..  916350 + -21.5  -3.53012   GCCGCCGTTTCGGTC    CGGCCAGGGGCCGCCC TTCG GGGCGGCCCCTG-CTG     TTTGGGCGCAACGCC 100 45
CXD87_RS04475 NONE
CXD87_RS04480  917429 ..  917458 + -20.9  -3.28791   AAGCGCTAATGTCCC       GCAAAAAGGCCGC GAAA GCGGCCTTTTTGC        TTATGGCGCCCCGGT 100 32
CXD87_RS04485 NONE
CXD87_RS04490  919462 ..  919481 +  -4.2  -2.80074   CTGGAATTTTGAGTC            CTGTCGCG GCTG CGCTATAG             TGATCTTATCCGGGC  41 29
        erpA  919945 ..  919970 + -18.3  -4.54727   CCGGTCCGCGATCGA         GGCCCTTCGGC ATGC GCCGGAGGGCC          TTTTCGTTTGGGCGC 100 53
CXD87_RS04515  925077 ..  925087 +  -4.6  -3.30124   GCGTGTTAAGTTGGT                 GGGG TAG CCTC                 TTATCGAGGGTCCCA  49 19
CXD87_RS04520  925802 ..  925823 +  -2.9  -4.62069   GGGCTTGCTTGAGCC           TGGCTCATG CCGA CTTGAGGCA            TTTTTGCGGTAGACG  71 52
CXD87_RS04525  927277 ..  927298 + -15.9  -5.30155   GCCCGCCGCCGGCAA           GACAGGCCC GCAA GGGCCTGTC            TTTTTTCATTGATGG 100 59
        nrdR  928188 ..  928212 +  -8.6  -2.90194   TGCACGATGGCGTCC         TGCACC-CGGT GCAC GCCGGGGTGCA          TGTGGTTGCGGCCGT  54 330
        ribD  930844 ..  930858 +  -9.2   -2.9006   GCGATCGGAACGCGG               TGCGCG TGG CGCGCG               TCTATCCGATGGGTT  56 98
CXD87_RS04565 NONE
CXD87_RS04570 NONE
CXD87_RS04575  935186 ..  935228 +  -2.5  -3.72576   TTCTCGCGCGAGAAC GCGATGAAGC-GCTGGCCGTC CAG GTCGGCCAGCCGCG-CGCAGC TTTGCTGCGCCAGCG  53 380
CXD87_RS04585  937127 ..  937161 +  -6.3  -3.65522   ATGCGCCGGCAATGG    CGCCGGCC-AC-CGCCG GAC CGACGAGCAGGCCGGTG    TTGTTGCCCTGCATG  57 138
CXD87_RS04595  939210 ..  939255 + -15.3  -3.05498   GCCTGCGCGAAGGCG CGGCGGCGCTGCGCGGCTGACG CCG CATCGGCCGCGCCG-GCCGGTG TATATATATCGCATG  77 6
CXD87_RS04605  940922 ..  940957 +   -19  -2.99319   GTCCCGACCCGTGGC    AAGGGGTGCCTGTCCC GGCG GGGACAGGCACCCCCC     TCTCTCTCCGACATT  90 93
CXD87_RS04610  942150 ..  942180 +  -7.4  -2.66969   GCCGCCCGGGAAACC       GCTGCCGCGGATCG CTG CGATCCGCGCTCCC       TCCGTTGTCTTGATA  50 175
CXD87_RS04615 NONE
CXD87_RS04620  943936 ..  943949 +  -4.5  -3.35813   GAAGCCCGGCCCGGA               GC-GCG AAG CGCAGC               TTGATTGAAATCAAG  51 4
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD  948074 ..  948107 + -28.3  -3.86015   CCGGCCTTGGTTCGC     CGACAACCCCCCGGG CTTG CCCGGGGGGTTGTCG      TTTGTGGCGGGGGTG 100 74
CXD87_RS04675 NONE
CXD87_RS04680 NONE
CXD87_RS04685 NONE
CXD87_RS04695  959266 ..  959282 +  -5.7  -3.44229   CTGGGTGCAATCCCG              GGGGTGC CGG GCGCGCC              TTGTCGTCGTAAGCT  53 54
CXD87_RS04700  959974 ..  960024 +  -2.3  -2.62184   CCAGGCCGGCCATGA CGTGCCAGCCGACGGGCGGACGCGC CAG GC-CGGC-GCCCATCGCCTGGGCCA TCATGTAGGCGCCGG  38 227
CXD87_RS04710 NONE
CXD87_RS04715 NONE
CXD87_RS04720 NONE
CXD87_RS04725  962827 ..  962837 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS04730  964311 ..  964326 +  -2.6  -3.61178   AGTTTTCACGGGGCA              TGGTTA TTCC TAACTA               TTTCAAATGACTCGG  50 495
CXD87_RS04740  965247 ..  965258 +  -3.6  -3.48395   CCAGCCTGCCTGCCC                TGCG TCAT CGCG                 TTCTATAGACGGAAT  49 6
        tldD  966778 ..  966795 +  -6.9   -5.9873   CCTGGCCTGGAAAAA             TCGCGTG GTGA CGCGCGG              TTTTTTTTGTGCTAG 100 66
        aroG  968349 ..  968369 +  -9.7  -2.52464   ACAAGGCGTAATCCT            TCATCGTGG CTG CCCCGATGA            TGGATTCGCGCCGGC  55 307
CXD87_RS04760  982313 ..  982335 + -19.2  -4.72272   CGCGGTGCCCGGCAA           GCCCACGCGA AGG TCGCGTGGGC           TTTTTCATGCCCGCC 100 57
CXD87_RS04765 NONE
        glcE NONE
CXD87_RS04775  986681 ..  986716 + -15.4  -3.68619   GGCGGCCGGTATCGA    CGCGCGTCGTGCCC GCCACCCA GGGCTTGACGCGCG     TTTCGATGAATTCCA  88 408
CXD87_RS04790  990604 ..  990641 + -20.5   -2.6563   GCGCGCGCCGTTAGG   CGGGCCCCGGCGCGGCGC CAT GCGCCGCACC-GGCCCCG   TGCCTTATTCCACGG  95 27
CXD87_RS04820 NONE
        mnmA  997951 ..  997983 + -11.1  -3.73775   GGAGGCGCGCCGGTC      TCGCGGTGGCCGCGG CCG CGGCCGCCACAGCGG      TTTCATAAACCTGGG  73 63
CXD87_RS04830  998869 ..  998924 + -24.2  -3.05596   CGGTCGGCGGCCAGG GTGGCCGGCAATGAAAAAGGCGGCTC ATGC GAGCCGCCTTTTTCATTGCACGCCGG TTCGGTCAGGCGGTC 100 62
CXD87_RS04840 NONE
CXD87_RS04845 1001635 .. 1001650 + -10.4  -5.96521   GCAAGGCAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 62
CXD87_RS04860 NONE
CXD87_RS04865 1005323 .. 1005357 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS04885 NONE
CXD87_RS04890 NONE
CXD87_RS04895 NONE
CXD87_RS04900 NONE
CXD87_RS04905 1011506 .. 1011523 +  -2.6  -2.66869   CGCGCCGGCGCGCCG             GCGCCA AGGAGA TGGCGG              TGAGTTCTTCCATAT  38 49
CXD87_RS04910 NONE
CXD87_RS04915 NONE
CXD87_RS04920 NONE
CXD87_RS04925 1014857 .. 1014898 + -14.5  -3.53012   CGGCGCGCCGCGTCC GCGCG-GCGCCGCC-GCTT CAGGAC AGGCCGGCGGCGCGCGTGC TTTCGGCCGACAAGC  81 43
CXD87_RS04940 NONE
CXD87_RS04945 NONE
CXD87_RS04950 NONE
CXD87_RS04955 NONE
CXD87_RS04965 1022183 .. 1022238 +  -7.2  -3.06696   CGCCGGCCTGGTGAT GGTCGAGGCCACCGCGGTCGAGCCGC GCGG GCGCATCAGCCACGGCTGCCTGGGCC TGTATTCCGACGCGA  51 205
CXD87_RS04990 1025782 .. 1025796 +  -3.5  -2.72344   GTCCAACTGCTGGAG              GC-CGC CCAT GCGCGC               TAATTCGAACTCGAA  41 8
CXD87_RS04995 NONE
CXD87_RS05000 1027525 .. 1027541 + -10.8  -3.31144   GCCTGAAGGTATCGA              GCGCCG GCGAG CGGCGC              TTGTAGCCCTCGGGC  66 35
CXD87_RS05015 1030540 .. 1030555 +  -2.5  -3.33696   TACAGATCAACTGAG              CC-GGC CGACC GCCTGG              TTCATTACCCAGGAG  44 27
CXD87_RS05020 1031953 .. 1031983 + -21.8  -3.23899   CGCGCCGCGCTGAGC       GGCGCCTGGCCGGC CGT GCCGGCCGGGCGGC       TTGCCTTACTTGAGC 100 28
CXD87_RS05030 1034023 .. 1034059 + -23.8  -4.26076   CCCGCCGCTCATCCC   GGCGCGGACGGCTTCCC TCGC GGGAGGCCG-CCGCGCC    TTTTCATGGCGGTGC 100 70
CXD87_RS05035 1034915 .. 1034948 +  -8.7  -3.18681   GGCGGGCGTAGTGCT     CGGC-GTTGCCGGCCT GCT GGGCCGGCGTCAGCAG     TTCGTCGGGTTCGCG  56 400
CXD87_RS05050 1038033 .. 1038075 + -12.6  -3.16564   GGCCAGGCTGATCAG CGCGGCGAACATGGTGCTGG TGT CCAGCGTGGTCGTCGCCGCG TTGATCAGGTAGCCC  68 140
CXD87_RS05085 1043847 .. 1043857 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 178
CXD87_RS05090 1044892 .. 1044906 +  -3.5  -2.53382   CGGGCGCCATCAGCC               TGCCT ATCGA GGGCA               TGACTTGCGCCTCGT  40 56
CXD87_RS05095 NONE
CXD87_RS05100 1048100 .. 1048121 + -12.9   -3.8591   CGTGTCGGTATCCGC           GGGCGCGGG CGTG CCCGCGCCG            TTATTCATTGTAGGA  83 52
CXD87_RS05105 1049506 .. 1049531 +  -3.1  -3.15544   CGAAGGCGATCTGCG         GCGTGGCGTAA TAGC TGGCGGCGCGC          TTGGTCAGCATCAGC  43 186
CXD87_RS05115 NONE
CXD87_RS05120 NONE
CXD87_RS05125 NONE
CXD87_RS05130 1054387 .. 1054397 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 154
CXD87_RS05135 1055864 .. 1055874 +  -8.2  -3.13899   CGAAATCGTACATGC                 CGCC CAG GGCG                 TATTCCTGCACGCTT  56 488
CXD87_RS05150 1059122 .. 1059156 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS05165 1061120 .. 1061133 +  -3.8  -3.53224   GGGTGCGCGTTCGCG               GCGA CTTTGA TCGC                TTTGACGGGCAAATG  51 314
CXD87_RS05175 1063035 .. 1063050 + -10.4  -2.89881   GCAATGCGCACAGGG              CTGCGG TTCG CCGCAG               TGTGTCGAATGAATA  59 243
CXD87_RS05185 1063457 .. 1063472 +  -6.1  -3.31461   GGTCCGGGTGTCTTT              GCGTG GCGAGA CACGC               TTGTCCCAGTGGGTG  53 55
CXD87_RS05190 1064699 .. 1064727 + -17.5  -4.11216   GGCTCTAGAAACCAA        GGCCTTGCAACTC GAT GCGTTGCAAGGCC        TTTTAAAAATGGCGG 100 127
CXD87_RS05215 1067236 .. 1067246 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 65
CXD87_RS05220 1068374 .. 1068430 +  -7.9  -3.63694   AAGAGCACGCTCAGG GCCACCGCGCCGGCGCCGCG-GGCG-GCC AGC GGCCCGACATGCA-CGCCGGCGTCG-GGC TTCTTGAAGCTGCCT  60 149
CXD87_RS05240 1072142 .. 1072166 +  -5.6  -3.91897   GGACAGCCTCGTCCT         GGCGCGCCAGC CGTC GC-GGCCCGTC          TTTATCCGTGCAACG  63 51
CXD87_RS05295 NONE
CXD87_RS05300 NONE
CXD87_RS05305 NONE
CXD87_RS05310 NONE
CXD87_RS05315 NONE
CXD87_RS05320 NONE
CXD87_RS05325 1087472 .. 1087499 +  -4.7  -4.07568   CGCCCCTGCCACCTC        GGCCATCGCCT GCACGA ACGCGGCGGCC         TTTTCCGCCACGCCG  63 253
CXD87_RS05370 NONE
CXD87_RS05375 NONE
CXD87_RS05380 1099307 .. 1099331 +  -3.4  -3.61517   GCACCATTGCAGCAC          CGCTTCGGCC GTCAG GGCCGGATCC          TTCTTCACGACGAAT  51 154
CXD87_RS05390 1102231 .. 1102267 +  -5.1  -3.13403   GAGCGTGCGCGTCAG  CGGC-CGC-GGCAGCAGC CGCA GC-GTCGCCAGCGAGCCG   TCTTCGTGCCGCACC  47 132
CXD87_RS05400 1104161 .. 1104187 +  -4.3    -3.445   GGAATCGTGAAGCTG         GCGACCTGAGC CGCGC GCTTAGGACAC         GTTTTTCCTGCATAA  51 17
CXD87_RS05405 NONE
        mgtE 1106258 .. 1106268 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 157
CXD87_RS05435 NONE
CXD87_RS05440 NONE
CXD87_RS05445 NONE
CXD87_RS05450 1115051 .. 1115067 +  -2.2  -3.13522   GCCCGTGACAGGTAA              GGCGAA ATGAA TTCTCC              TATTGATCCCGCGAT  42 176
CXD87_RS05455 1116019 .. 1116032 +  -2.3  -3.09933   TGGCGGGCTATCCCT               TGCCG GGGC CAGCA                TTGCATGGCTTGCCG  42 190
CXD87_RS05460 1116458 .. 1116472 +  -7.1  -2.70932   GCGGCCGAGTAACAG               GGCTC AGACA GAGCC               TGGTTGGCAGACCCA  48 29
        priB NONE
        rpsR NONE
CXD87_RS05475 1117684 .. 1117700 + -10.8  -5.75342   GCATGCCTGAAAAAA              GCCGGC CTGGT GCCGGC              TTTTTTTTCGAGGGC 100 48
CXD87_RS05480 NONE
CXD87_RS05485 1120119 .. 1120152 +  -2.9  -4.56597   CTGTCCGGCAAAGAT     CACCTGGGCCATCGG GATA CCGCTGGCCAGGCTC      TTTTTCGAGCCGCAG  71 160
CXD87_RS05515 1126195 .. 1126209 +  -2.1  -3.07935   TCAAGGATATGTTCC               GCAAG GACGG TTTGC               TTAAATGAATCCGAT  41 3
CXD87_RS05520 NONE
CXD87_RS05525 1128947 .. 1128984 + -28.5  -4.26076   CAGGCTGTTTGCAAG   GGCAACCCCCGGCCGCC GCAA GGCGCCCGGGGGTTGCC    TTTTCATGGCCGTCC 100 51
CXD87_RS05530 1129419 .. 1129443 + -17.1  -4.36914   GAACCGTGAAAAAAA          GCCCGCCGGCG CGA TGCTGGCGGGC          TTTTCTCGCGCAAGC 100 88
CXD87_RS05535 NONE
CXD87_RS05540 1131789 .. 1131806 +  -4.1  -2.52464   CAGCCACCGCTGGTA             CG-GGGTC AAA GACCTGCG             TGCCTTCGGGCACCG  40 130
        garL 1136442 .. 1136459 + -11.3   -4.0616   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTTGCCGTA  81 82
CXD87_RS05625 1145699 .. 1145720 +  -2.8  -3.25072   TGCTGGCGTTGCGGG           CAGCCGGG GGGCGG CGCGGCGG            TTCGGTTATGATGCG  46 109
CXD87_RS05630 NONE
CXD87_RS05635 1147847 .. 1147867 + -19.7  -3.75153   CACGTGCGATCGAGA            CGGCCCGGC CCT GCCGGGCCG            TTTGCATTGCAGCCA 100 47
CXD87_RS05640 1149339 .. 1149362 +  -6.6  -3.05343   GGCGTCCACGGAATA          GACGGACCAC GTTT GGCGTCCGTC           TGTTGGACATCTGCG  49 25
        pcaF 1150689 .. 1150704 + -10.4   -5.1925   CCGGCATGGCAAAAA              GGAGCC TTAG GGCTCC               TTTTTTGCGTTCTGG 100 54
        clpS 1152169 .. 1152187 +    -8  -4.19704   GACCTGATCCGCATC             GGGCGCGG TCG CCGCGTCG             TTTTGCCTGGCCTTG  74 34
CXD87_RS05665 NONE
        pbpC NONE
        clpA 1161978 .. 1161991 +  -4.5  -2.94747   ACTGATCGACTGACC               GTGTG GATC CACGC                TCTCTGATCGCCTGC  45 28
CXD87_RS05680 NONE
CXD87_RS05685 NONE
CXD87_RS05690 1165659 .. 1165687 +  -5.3  -3.16564   GACGCGAAAACAGAA        GGTTAACCTTTTT CGT ATACGGGTTAACC        TTAATACCGTACGCG  49 20
CXD87_RS05695 1169909 .. 1169919 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 292
CXD87_RS05700 NONE
CXD87_RS05705 1172103 .. 1172135 +   -17  -2.71712   TGATCGGCCTGTGCC     GGCGGCGCGG-GCTC CCCG GGGCGCTGCGCCGCC      ATTTGCCGCAGCCGC  80 38
CXD87_RS05710 NONE
CXD87_RS05715 NONE
CXD87_RS05720 NONE
CXD87_RS05725 1175777 .. 1175806 +  -3.3   -3.9461   TGGGCGAAGTCGAGG       CCTGAGCCAGTCC GCAC GCACGGGCGCCGG        TTCTTCTTGCGGAAC  58 21
CXD87_RS05735 1177860 .. 1177875 + -11.8  -5.86061   CGTTCGATTTTCAAG              CCGCCC CTCG GGGCGG               TTTTTTTTGGTGGGG 100 58
CXD87_RS05755 1183879 .. 1183891 +  -6.2  -4.15565   AGACCCATCTGGGCA                GCGG CCTGC CCGC                TTTTGCCATCGTCGG  66 211
CXD87_RS05765 1186768 .. 1186801 +  -5.8  -2.64616   ACGATGGCCAGCGCC     GCGCCGGCGATCTG CACCAC CAGCACGTCGCCGC      TCATCTGGCTGGCGC  45 443
        cyoB NONE
        cyoC NONE
        cyoD NONE
CXD87_RS05795 1192756 .. 1192788 + -14.1  -3.53012   GCGCCACGAGCTGCG     CGCGCGACGGCGCG GCTGAG CGCGCCGCC-CGCG      TTTGCGCCCGGGCGC  78 7
CXD87_RS05800 1193532 .. 1193565 +  -5.1   -4.1899   CATCCGCATCGACGG     CGGCATCACGCGCTCG GTC TGAGCGCG-GCCGCCC     TTTTCAATCCGATCC  69 4
        hutG 1194545 .. 1194579 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS05825 1199318 .. 1199339 +  -7.9  -3.78419   CGCGGGCAGGCACCA           GGCGTCCTG ATGA CGGGGTGCC            TTGTATCTTTCCTCC  66 16
CXD87_RS05830 1200683 .. 1200701 + -13.8  -3.21099   CGCCAGACAAGCAAA             CGGCCGCT CGC GGCGGCCG             TTCGTCATGGGGACA  73 173
CXD87_RS05845 1203175 .. 1203196 +  -2.8  -2.64616   CCTGCCCTGCGCGGC           GGGCCAGG CATGAA CCAGGGCC            TGCTGTACCTGGCGG  39 13
CXD87_RS05850 1204070 .. 1204099 + -23.7  -3.53224   GGTAACTACATACCC       GGGAGCCTGTCCC AGCG GGGACAGGCTCCC        TTTGCCGCGGCAGTC 100 36
CXD87_RS05865 1207124 .. 1207141 +  -2.5  -2.57344   ACCGTACCAGGCCGC             GCCGGCC TTCA GCCCGGG              ATTGTGCGCCGCGTA  38 356
        moaC NONE
CXD87_RS05885 NONE
CXD87_RS05890 NONE
        moaB NONE
CXD87_RS05900 1214350 .. 1214377 + -21.4  -2.70932   CCGAGGGACACCGCA        GGTGCCTGTCCC CACG GGGACAGGCACC         TCGTTCACCCCCCGA 100 138
CXD87_RS05915 1217761 .. 1217771 +  -5.4  -4.09243   GAGAATATGTTTTCT                 TCTC GTC GAGA                 TTTTCCGCGCCTATG  64 105
CXD87_RS05920 1218397 .. 1218414 +  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 54
CXD87_RS05930 NONE
CXD87_RS05935 NONE
CXD87_RS05940 1223640 .. 1223669 +  -7.7  -3.28712   AGCGTGTAGGCGGCC       GGCTGCACCAGCGC GCC GCGC-GCGGCGGCC       TTGTGCGCCAGCGCG  55 297
         ggt NONE
CXD87_RS05975 1231076 .. 1231134 + -21.6  -4.65895   GGTGGGGGCGGCGGG CCGCCGCAGCGGCGGCCG-GCTGCCGCG ATCGG CGCGGC-GCGCGGGCGCCGCCGCGCCCG TTTTTCGGTGGCGAC 100 45
CXD87_RS05980 1232414 .. 1232461 + -11.9  -2.62184   CCCTGGCGGTGGGGG TGCCGTTCGGACTGGCCGCCGG CTATT TCGGCGGCTGGACCGA-CAGCG TCATCTCGCGCGCCA  61 344
CXD87_RS06005 NONE
CXD87_RS06010 1237140 .. 1237155 +  -2.4  -4.10657   CAGCACCAGGGCCTT              GTCGGG GATA CCCAGC               TTTTCGAGGATATCG  61 414
CXD87_RS06020 1238790 .. 1238825 +   -11  -3.97636   GCCCACGCCGACAAG    CAGGC-GCGCCGCAAGG CGG CCTGACGGCGCCGCCGG    TTTCTCCATTCCAGT  79 2
CXD87_RS06025 NONE
        paaI NONE
        paaJ 1240825 .. 1240843 +  -5.9  -3.37796   GGCGTTCGCGGTGGG             CAGCGGC ATCAC GCCGGTG             TTCTCGCTGGTGAAG  55 405
CXD87_RS06050 NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF 1246974 .. 1247005 + -18.8  -3.55444   GGCGGGTTCGCAGGG      C-GCAACGCCGGCCG CCA TGGCCGGCGTTGCCG      TTTCAGGGGTAGACG  95 45
CXD87_RS06080 1249046 .. 1249080 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS06110 1257456 .. 1257477 + -14.5  -5.55769   TGCGCTCCCTACGAA           CGGCCTTTC GCGA GAAAGGCCG            TTTTTTATTGTCCCG 100 50
CXD87_RS06115 1265499 .. 1265533 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS06145 NONE
CXD87_RS06150 1271116 .. 1271139 +    -8  -3.27475   CCAGCACGTACCGGT          GCCCGTGCAG GTTG CGGCACTGGC           TGTTGTGGTCGGGGA  55 406
CXD87_RS06165 1272367 .. 1272404 +  -6.8  -3.53012   AACCAAGCGCCTGCG   CGGCAGGGTGCGCGAT GACTGA AGCGCGCGCCGGGCTG    TTTGCCCGCCGGCGC  58 4
CXD87_RS06170 NONE
CXD87_RS06175 1273855 .. 1273866 +  -7.2  -3.72576   CGCACACCGCGTAGC                CGCG CTCG CGCG                 TTTCCTGCAGCAGCA  64 326
CXD87_RS06185 NONE
CXD87_RS06190 1276958 .. 1276999 + -15.7  -2.52234   GCACGGCGCCGCCCA GCGCAATGCTGCCGGCGGC CAGC GCCGCCGCCATCCATGCGC  GTTCATGACGTTTGT  69 493
CXD87_RS06210 NONE
CXD87_RS06215 NONE
CXD87_RS06220 1282618 .. 1282671 +  -5.2  -3.86897   GCCGTTCTGGTCACG GGCGCGCTGTGGCCCTGTCGT-CCAT CGCC ATGCTGCGCCAGGCCCACGCCG-GCC TTTATGCCGCGTGCC  60 390
CXD87_RS06225 1283143 .. 1283194 +  -2.2  -4.59773   TCAGCCGCCAATACG GCGCGACAGCT-CGCGGGCGG-CCT CGACC AGGACCGGC-GCGTAGCCGTCCAGC TTTTTCAGCGTCACC  70 48
CXD87_RS06245 1288785 .. 1288801 + -10.8  -3.13403   GGTGCAGGACATCAT              CGCGCC CGACC GGCGCG              TCTTCGTGGGCACCG  64 138
CXD87_RS06255 NONE
CXD87_RS06260 NONE
CXD87_RS06265 1293019 .. 1293038 +  -3.4   -3.5764   CGTGTCGTGGAACAG            CCCGGACA TCAC TGCGCGGG             TTTCCCACTGGCGTT  51 510
CXD87_RS06285 1296565 .. 1296579 +  -2.7  -3.14881   CGACAGGCGCGGCGC               GCGCC CGACC GGAGC               TTCGTGACCCGATTC  44 4
CXD87_RS06290 NONE
CXD87_RS06295 1300376 .. 1300410 + -16.5  -2.53995   CTGCCCCCCGTATGA    CGGG-GTGCCTGTCCC CGCG GGGACAGGCACACCAG     TCAGTTCAGCTGGAT  77 61
CXD87_RS06310 1302040 .. 1302059 +  -4.8  -4.57073   GCGTAGAGTTGCTGC            GCGCGCGC ATGG GCGCGGCC             TTTTTCCACCAGATG  72 359
        guaB 1307780 .. 1307817 + -22.2  -4.86731   ATCACGCAATGCATC   GCGCACCGG-CAGAACC GGCCA GGTTCTGGCCGGTGCGC   TTTTATTTCCAACCG 100 58
CXD87_RS06335 NONE
CXD87_RS06340 1309715 .. 1309731 +  -3.7  -4.12902   AAGTCGGTGGATTGA              TAGCTGA ATT TCAGATA              TTTTACAAATAGTTG  61 39
CXD87_RS06345 1310030 .. 1310040 +  -6.8  -3.16564   AGTCCCGCAGGGTCT                 TCCG ACG CGGA                 TTGGTGACATGGGGC  52 8
CXD87_RS06350 1311596 .. 1311646 +  -5.2  -3.75332   CTGGTAGGCGAGCAG GTCCATGGCCAGTCTGGCTTCG TTGGTGT CGGCGGCGAGCTGGCCCTGGGC TTTGGCTTGGCGAAT  58 232
CXD87_RS06360 1313906 .. 1313928 +   -12  -3.58522   GCAAATCCGGGCTTG           CTGGCCGG GCTGTCG CCGGCCAG           TTTCGGCATCGTCAT  72 314
CXD87_RS06370 NONE
CXD87_RS06375 NONE
CXD87_RS06380 NONE
CXD87_RS06385 NONE
CXD87_RS06390 NONE
CXD87_RS06395 NONE
CXD87_RS06400 1322269 .. 1322290 +  -2.8  -2.74999   GGCCAGTCGGCGGCC           GCCGCGCC CGGGAT GACGCGGA            TCCTGTTGCGGGTTG  40 252
CXD87_RS06410 1324157 .. 1324170 +  -3.8  -3.64703   GGGCGCCAGCGAGGC               CAGC AGGGCG GCTG                TTTCGCTGGCCGCGA  54 440
CXD87_RS06425 1327655 .. 1327677 + -10.4  -2.81464   AACGCAATAGGACGG           CGGCGCGGGC AGG GGCCGCGCAG           TATCATGGCTGGTCG  59 119
CXD87_RS06430 NONE
CXD87_RS06435 1328816 .. 1328854 +  -8.6  -2.70932   CTAGGCCGCCGCAAG   GCGGGCGCAAGGCCTCGC GCG GCCAGTCCGTGCGCCACC   TGCTTGCCGGCAACC  52 37
CXD87_RS06440 1330094 .. 1330108 +  -3.4  -3.35073   GGGGACGGACCTGGA               GGCGCG CAG CACGTC               TTCCTTGCCCATGAT  47 204
CXD87_RS06450 1332232 .. 1332278 + -14.5  -3.36273   CGCTGCGCGCCAGCG CAACGCCGCGGCCGTCGATGGCG GCT TGC-AGC-ACGGCCGCGGAGTTG TTGATCTTCAGGCCG  79 298
CXD87_RS06460 1333792 .. 1333820 +  -2.4  -2.57931   CAGGCCGTGGACCAG       GGGCA-G-GCATGC TGA GCGTGCGCGTGGCC       ATTGTCGGCGGTGGC  38 11
CXD87_RS06465 NONE
CXD87_RS06470 1336000 .. 1336017 +  -5.5  -2.63596   CGACCAAGACTGAGT             CCGCGCGT CTG GC-CGCGG             TCCTGTCCAATCACC  44 28
CXD87_RS06475 1337665 .. 1337679 +  -9.2  -3.44146   GATGGCCTCGAGCAG               CGCCGT GCG GCGGCG               TTCGTTGTCGCGGCG  61 408
CXD87_RS06485 NONE
CXD87_RS06490 NONE
CXD87_RS06495 1341103 .. 1341115 +  -6.2  -3.31726   GGGGGGGGGGGGCGC                GCCG GTCCG CGGC                TGTTCTATAACGGCC  53 427
CXD87_RS06500 NONE
CXD87_RS06505 1343679 .. 1343700 +  -2.9  -2.94099   CGAGAAAACCGGCGG           GGCGCGC-TG AAC CATGTGGGCC           TATCTCGTCAGGCGA  41 16
CXD87_RS06510 NONE
CXD87_RS06515 NONE
CXD87_RS06520 1347107 .. 1347127 +    -6  -3.53012   CCGCGCGCGGGAGGC            GGCCGTGG CCTGA CAGCGGCC            TTTGCGGGGGGCGGC  56 13
CXD87_RS06525 1348324 .. 1348337 +  -3.7  -3.16647   TGCCCTGGGCAGCCG               GCCCG ATTC CTGGC                ATTTTCATGCCTGGA  45 85
CXD87_RS06530 NONE
CXD87_RS06535 1349279 .. 1349315 + -18.8  -2.70932   GCCGCCTATGGCCTG   GCG-GGCG-CGCGCTTGC GGG GCGAGCGCGGCGCCGCGC   TCGTTGACGCCGGCC  87 44
CXD87_RS06545 1351099 .. 1351113 +  -3.4  -3.57144   CGCGCTCGCGCAGCG               CCGCCG TCA CGCTGG               TTTCGGCCTGGAACC  51 498
CXD87_RS06555 1352689 .. 1352699 +  -2.4  -2.80816   CGAGAACACCTCGAC                 CCTG GCG CCGG                 TGTGCTACCTGCAGG  40 310
CXD87_RS06565 1352999 .. 1353014 +  -3.2  -4.00066   GCGACGCAATCGGCG              CGCTAT TGTT AAAGCG               TTTGTCAGTTGTCCA  58 98
CXD87_RS06570 1354176 .. 1354210 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 439
CXD87_RS06580 1355808 .. 1355845 +  -3.9  -3.56594   GGTGCCCATATAGTC   GGCGGCCGCGGCCTGGGG CAG CGGCGGGTTG-GGCCGGC   TTTGGGCGAATTTCA  51 491
CXD87_RS06590 1358178 .. 1358191 +  -8.1  -3.28712   CGACCAGGTTGCCCA               GCACG ATGC CGTGC                TTGTGGCCCAGGCCC  55 237
CXD87_RS06600 NONE
CXD87_RS06605 1360081 .. 1360099 +  -2.4   -2.8655   GAAAGCGATGATGCC             TTTCGCTT GAT AAGGGAGA             TCTACTATGCCTCGC  40 16
CXD87_RS06610 1360490 .. 1360520 + -16.2  -4.09685   TACATCGCGGATCGC       TGCAAACGGGGCTG TAA TGGCCCCGTTTGCG       TTTTGAAGGCTCAAA  95 50
CXD87_RS06615 NONE
CXD87_RS06620 NONE
CXD87_RS06625 1364331 .. 1364344 +  -2.3  -3.88137   CCGGACCCCGCCTCT               GCGGA GTGA TACGC                TTTGTCGGCAATTGT  54 17
CXD87_RS06630 1364844 .. 1364873 + -15.8  -4.41047   TACGGCAGGCCGCGA       CGCCGCCTGGTTC TTCGC GAACC-GGCGGCG       TTTTCCTTGGGCGCT 100 61
CXD87_RS06635 1365065 .. 1365099 +   -26  -3.45027   CCCGACCAGTAGTTC     CAAGGCCGTCAGTGAT CAC ATCACTGACGGCCTTG     TCTTTCGTGGGGACT 100 33
CXD87_RS06645 1367181 .. 1367214 + -15.9  -3.14564   AACTGGAGCTGTAGT     CCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGC      TTCCTCGGCCCGTGC  78 27
CXD87_RS06655 1368760 .. 1368783 +  -8.8  -2.58892   TGCCGGGGCGGGGCT          GTGCCGCC ATGCGCGA GGCGGCGC           TCAATTGATCTGCCT  52 263
CXD87_RS06660 1369120 .. 1369143 + -14.6   -5.0925   CAACCAGATCAAAAA          GGCTTGGCGA TTCA TCGCCAGGCC           TTTTTCGTTTTCGCA 100 35
CXD87_RS06665 1369927 .. 1369972 + -12.7  -3.05844   ATGTAGAACTGGATG CGCG-CG-ATACGGCCGCGCA CGTACT TGCGCGGCTGTATGCGGCGGG TCTTGAAGTCCACGA  66 360
CXD87_RS06675 1370815 .. 1370845 + -10.4  -4.86621   GCCGCACCGTGCGCA      GCCGCC-TGCCGC GATAGG GCGCCAAGGCGGC       TTTTTCATTGGGCGT 100 59
CXD87_RS06680 NONE
CXD87_RS06685 1371820 .. 1371836 +  -7.3  -3.20348   TTTGGGGTCGAATAA              TATGCGC ATT GCGTATA              TTCCGTATTCCTCCC  52 89
CXD87_RS06690 1373149 .. 1373207 +  -7.9  -4.07568   TTCCGTCTTCCACGG CCTGGACTGA-GCCGTATCGCGTGGCGC GCCA GCGCCACGCGAGCCCGCGTCAGACGCGC TTTTCCCCGCCCAGC  69 16
CXD87_RS06700 1374822 .. 1374842 +  -6.8  -3.40403   GCGGGCGGGCTGGTT           TCGC-CGCC CACC GGCGCGCGG            TTGTAGTGAAAGGGC  55 180
CXD87_RS06715 NONE
CXD87_RS06720 NONE
CXD87_RS06725 NONE
CXD87_RS06730 NONE
CXD87_RS06735 1380961 .. 1380971 +  -3.2  -3.05384   ATTGCCCTGTGGCGC                 TCGA CGG TCGG                 TTGAGTCCGCAGGGG  42 11
CXD87_RS06740 NONE
CXD87_RS06745 NONE
CXD87_RS06750 1384756 .. 1384770 +    -7  -5.15969   CTATGCGGGCTTGCT               GCCCCC CGA GGAGGC               TTTTTTGCCTTGGGG  93 161
        recA NONE
        recX 1390815 .. 1390861 +  -9.3  -3.33815   CGACTGAACGATGCC GCTTCGTGCGGGCGGCGGCGCGC GAT GCGGGC--CCGCCTGCCTGGGGC TTGCTTGCGGCCCGT  61 34
CXD87_RS06785 1394394 .. 1394414 +  -6.7  -3.40403   GGTCGGCCCGGGCCG            CGTCGCCGG CAA TCGGCTGCG            TTATACTCCCCAGGA  56 153
CXD87_RS06790 NONE
CXD87_RS06795 NONE
        sucD 1397177 .. 1397196 + -16.4  -5.78622   CCGCCTGTCCCAGGA            CGGCCCGC GATC GCGGGCCG             TTTTTTTTCGCATGC 100 57
CXD87_RS06805 1398138 .. 1398180 + -23.5  -5.07652   GCTGAACTACAATAG CGGGCTGTTCGGGCCCCGCC TTCA GGCGGGG-CTGACCAGCCCG TTTTCTTTTGGCCGC 100 47
CXD87_RS06810 1399061 .. 1399094 +  -5.9  -4.03413   GTTCGTGCTGGCCAT     CCTGGGGGTGGTGGC TTCG GTCATCGTCTCCAGC      TTTCTCTGACGCCCT  66 92
CXD87_RS06815 NONE
CXD87_RS06820 NONE
CXD87_RS06825 NONE
CXD87_RS06830 1403682 .. 1403699 +  -2.6  -4.23781   TCCGCCGGCCCGGCG             TCCGGC GACAAA GCCTGA              TTTCATTTTCATCAA  62 8
CXD87_RS06835 1404292 .. 1404333 + -23.8   -4.2231   GCCTGGGGCGGCCGG CGGCGCGGAAGCGA-CGGC AGGCA GCCGCTCGCATCCGCGCCG TTTTGCGTCATGCTT 100 53
CXD87_RS06840 NONE
CXD87_RS06845 1405337 .. 1405356 + -12.8  -5.07652   GCCGGCATGATGCAA            GCCCTCGG TCAT CCGGGGGC             TTTTCTTTTGCCGCG 100 50
CXD87_RS06850 NONE
CXD87_RS06855 1407242 .. 1407280 +   -11  -3.01712   GGGTCGCGGCGTTCA  TGGCGG-CCGCGGCGGCG CCGTC TGCC-CCGCGCACCGCCA  TCTTGGCGCGGCAGG  62 185
CXD87_RS06865 NONE
        cpaB NONE
CXD87_RS06875 NONE
CXD87_RS06880 1413018 .. 1413031 +  -8.1  -3.53012   GCTGATCCGCCGCAT               CGTCG CCAT CGACG                TTTGAGGAGCCGGGC  60 7
CXD87_RS06890 NONE
CXD87_RS06895 NONE
        folD 1416408 .. 1416422 +  -3.4  -3.75933   CGTGCGATCGGAGAA               ATCGCC GCC GGCGGA               TTTGCTCGCGTCTAT  55 187
CXD87_RS06920 NONE
CXD87_RS06925 NONE
CXD87_RS06930 1424149 .. 1424159 +  -6.8  -3.07816   CGTCGATATCGAACG                 GGAG CGT CTCC                 TTGGATAACTCGCAC  51 7
CXD87_RS06935 NONE
        purU NONE
CXD87_RS06945 NONE
CXD87_RS06950 NONE
CXD87_RS06955 1428931 .. 1428952 + -14.5   -5.1287   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 53
CXD87_RS06965 1430328 .. 1430350 +  -9.8  -3.40403   CTTACAGGCCCAGTA           CGGCCTGCAT GTC GTACAGGCCG           TTGTCCTGGCGCGCC  65 76
CXD87_RS06980 1432265 .. 1432286 + -15.9  -6.10489   GCTCTACCAACCCTG           CCTCCAGGC GCAA GCCTGGAGG            TTTTTTTTTGCGGTT 100 48
        hrcA 1436049 .. 1436066 +  -5.5  -3.54382   GCCTGCGCGCGGGGC             GGCGCCT TGAG AGGTGTC              TTCGTGTTTCTTCGC  54 62
CXD87_RS07000 1437183 .. 1437200 +  -8.3  -2.52676   CTGTGGTTGAAGCGG             CGGGCGC GAGC GCGCCGG              TCCATTCCGCGAATG  51 50
CXD87_RS07005 1437511 .. 1437536 +  -3.8  -5.52384   GGGCGGCGACGCGCC         GTCCGGCGGC GTCATG GGAGCCGGGC          TTTTTTTCCTGGAAA  90 54
        grpE 1438156 .. 1438200 +  -5.6  -3.05384   GTCCGGCGCTGGTCG TGGTGTCCGCCGGCCAGGGCTG AAG CAGGCATGGCCGCCGC-C-CCA TTCGATCCCGCCGAG  47 3
CXD87_RS07015 1438596 .. 1438614 +    -3  -2.78725   AACTCCAGTTACTGG             GGGACTGA GTT TCAAACCC             TGATTCCTACCGTAT  40 55
        dnaK 1440599 .. 1440641 + -18.5  -3.27298   GGCCGAACGATGACG TGCGATACGCCCGGTAGCTG ATTC CAGCTACCGGGCGCG-CGCG TTGATGATTCAGAAC  93 42
        dnaJ 1441884 .. 1441913 + -22.3  -2.88249   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 93
CXD87_RS07035 NONE
CXD87_RS07040 1446184 .. 1446215 +  -7.9  -3.85864   TGGGCCAGGCGTCGA      GCA-GCCGGCGCAG CCAGA CCGCGCCGGCCTCC      TTGTTGTAGTGCTCG  67 187
CXD87_RS07060 NONE
CXD87_RS07065 1450054 .. 1450082 + -16.7  -4.38712   CCAGTAAGCGGCGCC        GGGCAAGCCCCCG ATC CGGGGGCTTTTCC        TTTTCTAGCGCTCGG 100 34
CXD87_RS07075 1452006 .. 1452030 + -11.4  -5.02074   GCATCAGCCGAGAAA         CCCGC-GCCCC TATG GGGGTAGCGGG          TTTTTTGCCGAATGG 100 60
CXD87_RS07080 1453208 .. 1453225 +  -3.3  -2.74864   TGTGGGATTCCGTTT             CGGGTTG AGGC CGGTCCG              GTATTTGCTTCTACA  40 83
CXD87_RS07085 1454576 .. 1454586 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS07090 1455958 .. 1455980 +  -7.6  -3.17212   CGCGCAGGCGCGCCA           GCAGTTCGCC GAC GCCGAACGGC           TTGGTCAGGTAGTCG  53 393
CXD87_RS07125 NONE
CXD87_RS07130 1466987 .. 1467021 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS07160 NONE
        lolA 1473977 .. 1473997 +  -3.3  -3.05596   CCTGCGGGCCAAGGC           CGCCGCAT GGTGTA ATGCG-CG            TTGGATCCGCCCGTG  42 74
CXD87_RS07170 NONE
CXD87_RS07175 1476801 .. 1476818 + -11.3  -4.98531   CACGTGAACCAGAAA             CGGAACC CGCG GGTTCCG              TTTTTCATTTCGGCG 100 54
CXD87_RS07180 1477441 .. 1477458 + -14.1  -4.95957   GTGCCGCAAAAAAAG             GCCGCCC ATCC GGGCGGC              TTTTTCATTGATTTG 100 167
CXD87_RS07195 1478849 .. 1478862 +  -9.5  -3.28791   GCCAGGAAGGCTGAC               CGGCC CGCG GGCCG                TTATGCGCCAGCCGT  61 27
CXD87_RS07205 1480490 .. 1480511 +  -7.3  -2.78463   GGGAAGAACACCATC           TCGCGCGCCA TGC TGG-GCGTGA           TCTGCTGCAGCGCCT  49 352
CXD87_RS07260 1493625 .. 1493673 +  -6.6  -2.70932   CCGCCGCGGACAACG AGGAGCGG-TCCG-GCCCGGGC TGACCGC GCCCGGTCACGGATCCGTGCCA TCATTGCCGGCGGCG  47 3
CXD87_RS07265 1494553 .. 1494563 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS07270 NONE
        yaaA 1496368 .. 1496405 +  -3.4  -4.21812   CGCAAGCAGGCCTGA  CAGGACG-CGCG-ATGTC GGCA GGCTTACGCGTCTTCCTG   TTCTTTTCGCTCGGC  63 26
CXD87_RS07280 1498089 .. 1498103 +    -7  -3.72576   CGGCGTCGGCGCGCT               CGCCGG TCT CGGGCG               TTTCCTCGCCCGCCG  61 494
CXD87_RS07290 NONE
CXD87_RS07295 1501647 .. 1501681 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        thrS NONE
CXD87_RS07325 1506935 .. 1506971 + -19.3  -3.05463   CAGGCTGATCCCATC    CCCGGCCCGGTTGCCCT CGA GGGGCGTCCGGGCCGGC    TTGCGTGCGGCCCGT 100 33
CXD87_RS07330 1508027 .. 1508040 +  -3.1  -2.87243   GCCGGCTGAACTTGC               TGCTA TGAC TGGCA                TCGTTATCGTCGTGC  41 32
CXD87_RS07335 NONE
CXD87_RS07340 1508831 .. 1508857 + -10.8  -2.62735   AAAACCTCAGGTTCC         GGCAGCCCGC CGTCGGC GCGGGCTGCA         TCGTCTACGCGCTCT  59 42
        ptsP 1510652 .. 1510669 + -10.5  -5.64006   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT 100 47
CXD87_RS07360 NONE
CXD87_RS07365 1513817 .. 1513835 +   -16  -5.31275   GGGCGCGGCAATGCG             GGCAGGCC TTG GGCCTGCC             TTTTTTGTCGTCAAA 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
CXD87_RS07385 1516975 .. 1516985 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS07390 1518229 .. 1518269 +  -5.9  -3.29144   CGGGGCGGCCCTCGG  GATGCCGCGGGAGGTCATC CGT GATGTCGTGCCACGGCGCC  TTGTGGGCGACGTAG  53 265
CXD87_RS07425 1524163 .. 1524178 +  -7.5  -2.71011   GCGGAACAGGGACCG              GCGCG CCGTCC CGCGC               TGATTGCGAAGGGAT  51 7
CXD87_RS07430 1525429 .. 1525448 +   -15  -5.15634   CGCCCGCATGGAAAA            CCGGACGC GCGA GCGTCCGG             TTTTTTCATGGCCTC 100 72
CXD87_RS07440 1527040 .. 1527066 + -17.3  -5.26875   GCCGGCGCCGTCCAG        GCCCGC-CGCCC TTCG GGGCGCGCGGGC         TTTTTTCATTGGAGG 100 46
CXD87_RS07445 NONE
CXD87_RS07450 NONE
CXD87_RS07455 1527975 .. 1527993 +  -4.4  -2.77523   CCGTGCCCTTGCCGC             TGGCGCTC TGA GTCCGCCA             TGATCTTCCTGCGCA  43 15
CXD87_RS07460 1528576 .. 1528593 +  -9.1  -3.41836   AAAATAGCCGATTCG             CGGC-CGC CTG GCGGGCCG             TCTTTCCATCCCTAT  63 129
        purE NONE
CXD87_RS07470 1530319 .. 1530333 +  -3.4  -2.60075   GCGCTGGGCATGGCC               GCGCCG CTC TGACGC               ATTGATTCCCGCCGC  39 14
CXD87_RS07475 1531418 .. 1531434 +  -7.2  -2.62184   AACTCCTGATTGCCG              CGCCTG CCGGC CGGGCG              TAATCTCACGCGGAC  47 56
CXD87_RS07480 1532558 .. 1532595 + -10.5  -3.06162   CTAGGGCGAGGGCGG   CGGGGCGGGCAAGATCGC CAA GCGATAC-GCCTGTCCCG   TATTGCGGTACGCTA  60 37
CXD87_RS07485 1533499 .. 1533517 +  -5.9  -3.62518   GTATTTGATGGGAGA             GCAAGGG GAATA CCCTAGC             TTTCCGGATCTTTCG  59 50
CXD87_RS07490 NONE
CXD87_RS07495 NONE
CXD87_RS07500 NONE
CXD87_RS07505 1536887 .. 1536910 + -19.6  -2.75064   TGGGTTGAGCCCGGC          CTGCCGCGCG CGCC CGCGCGGCAG           TGGTTCCATGGCCGG  93 33
CXD87_RS07510 1538597 .. 1538627 +    -9  -3.89956   CCGGCACGCCGGGCG      CGATGCCGC-CGCG CAACA CGCGGGCGGCG-CG      TTTGGTCTATCCTGC  73 55
CXD87_RS07515 1539241 .. 1539280 + -12.1  -3.73072   GCACGCGGGGAAGTT  TGCCG-GTGCCAGTCCCC CTTGC GGGGACAGGCACGCGGGG  TTTAGTAGAAGGCTT  77 122
CXD87_RS07530 NONE
        xerD NONE
        ybaK 1544841 .. 1544863 +  -9.1  -2.94144   TCGTCGCATGACCAG          GCCGGCGCGT TACG GCG-GCCGGC           TCCTTTCCATGGAGA  56 100
CXD87_RS07545 1545437 .. 1545451 +  -5.6  -3.57144   CGCAGTTCCTGGCGG               TGCTGG GCA CCCGCA               TTTCGCACTGACCCC  54 0
CXD87_RS07550 1545971 .. 1545981 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS07555 1547445 .. 1547463 +    -3  -4.07885   CGGATAGTTGCGGCC             CAGCGC GTGGGCG GCGCGG             TTTTCCGAGGACATC  58 485
CXD87_RS07570 1550155 .. 1550169 +  -9.2  -3.28712   AACTGGGAAAACATC               GCCGCG CTG TGCGGC               TTCTAGGCCGCGCGC  61 187
CXD87_RS07575 NONE
CXD87_RS07580 1556770 .. 1556828 + -24.1  -2.71731   TGATGGGTCCGGTCG -G-GCCGGGGCTCGCCAGCTACGCATTCT GTT AGAATGCGTAGCTGGCGGGCCCCTTCGCA TGGTTCGGCGGTGAA 100 521
         ffs 1556939 .. 1556974 + -10.7  -2.70932   AGGGGCGCCGTGACC   GGAATGTATCGCGATCC AGGC GGATCGC-AT-CATTCC    TGGTTGCGGCGCCCC  60 54
CXD87_RS07590 NONE
CXD87_RS07595 1559543 .. 1559577 + -13.5   -2.6927   GCTGCCGTTCTGATA    TCGC-CTTGGCGGCCC AGCC GGGCCGCCGGGCGCGC     TGCTGTCTGCGCGAT  67 28
        recR 1560234 .. 1560244 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS07605 1561437 .. 1561466 +  -2.7  -4.13767   CGCCGTCCTCGAGTA       TGACC-AGGCGGGC GTT GCGCGCATCGGCCA       TTTTCACATCCGACA  61 214
CXD87_RS07625 1564485 .. 1564519 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS07670 1573202 .. 1573254 +   -11  -3.28791   CGCGCAGGCATGCTG CGCCGCGCGGCCATCCGGCGGGGCC GCAA GGCGCCGCCGGGCA-CCGCCCGATG TTATCCCCGGCAAAT  66 298
        mutS NONE
CXD87_RS07685 1578131 .. 1578152 + -15.9   -4.4078   GGGCAGGCATGCTAA           TGGCCTCCG GTAA CGGAGGCCA            TTTTCATTGCGCGAA 100 520
CXD87_RS07690 1578933 .. 1578956 + -18.2  -5.40474   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 50
CXD87_RS07710 NONE
        glnH NONE
        glnP NONE
        glnQ 1585411 .. 1585432 +  -8.8  -3.05844   GTGGAAACCGCGTCG           TCGTGCAT CGTGAC ATGCACGA            TATTGGCGTCGGCCG  55 165
CXD87_RS07755 1591233 .. 1591244 +  -4.4  -3.35679   GTTCGTGGGACGCGG                CTGA GGTT TCAG                 TTCTCGCTGGCGGCC  51 22
CXD87_RS07765 1593991 .. 1594001 +  -3.2  -3.89614   TTACGCTCGGCTTTG                 GTCA GAT TGGC                 TTTGTCGCCCTTGGC  58 441
CXD87_RS07790 1596754 .. 1596780 + -12.2  -3.05384   GCGCAGCGCCGCCAC         CTCGGCGTCGCC CGG GGCGGCGTCGAA         TTCGGTGAGGCCGGC  66 492
CXD87_RS07800 1599031 .. 1599047 +  -6.5   -4.8083   AACTTGCGGCCGCGC              TGTCGGC CAC GCTGGCA              TTTTTCGTGCTGTTG  82 139
        rdgB 1603174 .. 1603184 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS07820 NONE
CXD87_RS07825 1605538 .. 1605560 +  -7.6  -4.16842   CCAGGAGTGCGGGAC           CTGGCACGCA TTT TGCTTGCCTG           TTTATTGCCAGTCGG  74 133
        glnA 1607030 .. 1607082 + -22.1  -3.11634   ACTACAGCCTGTAAT CCGGGAGGCTGTGCGGCG-GCGGGCC TCGC GGCCCGCCCGCCGCGC--CGTCCCGG TTGCCTCCTATGACG 100 27
CXD87_RS07835 NONE
        ntrC NONE
CXD87_RS07850 1611466 .. 1611488 + -11.9  -4.56597   TGCCGTAAAGTGAGA           CGGGCGCCG CCAGC CGGCGCCCA           TTTTTCCACGGCGCG 100 33
CXD87_RS07855 1612630 .. 1612664 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 214
CXD87_RS07880 1618273 .. 1618286 +  -9.5  -5.27335   CGCCGCCAGGAAAAG               CCGCC TTCG GGCGG                TTTTTCTTTGGCCGC 100 48
        dkgB 1621767 .. 1621784 +  -2.6  -3.65351   GAGGGGTGGGCGTAT             TGCTGG ACAAGA CCGGCG              TTTCGCTGACGCTGG  51 478
CXD87_RS07905 NONE
        recG NONE
CXD87_RS07915 1627538 .. 1627564 +  -9.4  -3.14132   GGCCGGCGTGGCGAA        GCCC-GGCCGG AAATGC TCGGCCAGGGC         TTGCTCGACCACGCG  59 58
        mmsA 1630076 .. 1630105 + -18.6  -2.67316   GTTCGGGCTGAGCGC       GCGCCGGCGCGGC CGGGC GCCGCGCCGG-GC       TGCCTTGTTGCGTTC  87 30
CXD87_RS07930 1630692 .. 1630713 + -15.9   -5.4505   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 47
CXD87_RS07955 NONE
CXD87_RS07960 NONE
CXD87_RS07965 NONE
CXD87_RS07970 NONE
CXD87_RS07975 NONE
CXD87_RS07980 NONE
        tviB NONE
        tviC 1646016 .. 1646066 +  -2.7  -3.07816   GCCGCCATGCCCTGG TACACGCAATTCCTG-CG-ATGA TCGAGCT TCATTCGTCAGGCATCGCGCGTA TTCCGTACCTGACGG  42 5
CXD87_RS07995 1648101 .. 1648119 +  -5.2  -3.13403   GATGAGCCGGAGCAT             GGCATGAG CGC CTCGTTCC             TGTTCCTGCAGGGCG  49 36
CXD87_RS08000 1649297 .. 1649307 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD87_RS08005 NONE
CXD87_RS08010 NONE
CXD87_RS08015 1652858 .. 1652892 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS08080 NONE
CXD87_RS08085 1666246 .. 1666282 + -11.4  -3.01712   TATGCGCCCGATGCC    GTCGTGCGGGCGCTGG ACGCG CCGGCGCTGGCGCGCC    TGTTCGCGGCCAGCG  65 427
CXD87_RS08095 NONE
CXD87_RS08100 NONE
CXD87_RS08105 NONE
CXD87_RS08110 NONE
CXD87_RS08115 1672895 .. 1672921 + -22.3  -3.05384   GGCAAGTAGGCGCGG         GCGGGCGCGGG CGGGC CCCGCGCCCGC         TTGCGTCGCGCACGC 100 32
CXD87_RS08130 1675609 .. 1675656 +  -5.4  -2.73468   ACGGCGATGACCGCG TGCGCGGGCTC-CAGCCGGGT GCTCACG GTCAGGCGGCGCGCTCGCGCA TGCTTGAGGATATTG  43 191
CXD87_RS08145 1681424 .. 1681444 +  -8.2  -3.34895   CGATGGCGGCATCTT            GCCTTGGC GAATG GCCACGGC            TTGCTTCAGGCTGGC  59 267
CXD87_RS08165 1683550 .. 1683588 + -10.1  -3.65351   GAACCGGTCTGAGCG  CCGGGGCGGCGGCG-CCC GCAT GGACCGCCGCCGTCGCGA   TTTCCATGACGGTGC  67 29
CXD87_RS08195 NONE
CXD87_RS08200 1690254 .. 1690295 +  -3.7  -2.71791   CTCGACATCAACGGC GG-CGCCGTGATGCTC-TG ACACGC CATGCGCATCGCAGCGGCC ATTTGCACCAAAACT  41 8
CXD87_RS08205 1691673 .. 1691687 + -12.8  -4.15044   GTCGCACTGCGCCAG               CCGGGC GTA GCCCGG               TTTCTTCAGGCGCGC  86 383
CXD87_RS08215 1693617 .. 1693632 +  -5.4  -3.67597   CAGTCGGTGCCGGCC              GG-CCTG CCG CAGGGCC              TTGTTCCCTGGGAGC  57 286
CXD87_RS08225 1695352 .. 1695386 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS08265 NONE
CXD87_RS08270 1702915 .. 1702927 +  -4.8  -3.01712   CAGTACGATATCGTG                CTGG CGCGC CCAG                TCTTCCACCCCCGCG  46 363
CXD87_RS08280 1703937 .. 1703947 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS08285 1705424 .. 1705479 + -11.7  -4.07568   CCAGCGTATAGCCGT CCGGGGTGGCCTTGGCCAGCGCG-TCG GCGC CGATCGCGCCG-CCGCCGCCGCCGCGG TTTTCCACCACGACC  82 498
CXD87_RS08295 1709036 .. 1709049 +  -2.3  -3.01918   CGCAAACCGGGAGTC               CTGCC TGAT GGAAG                TCGTTTATGCCCTGG  41 18
CXD87_RS08300 NONE
CXD87_RS08305 NONE
CXD87_RS08310 NONE
CXD87_RS08315 NONE
CXD87_RS08320 1712184 .. 1712194 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 117
CXD87_RS08325 1713231 .. 1713256 +  -8.2  -2.70932   TATGGTAGAAAGGTC         AGCGGCAGGCC ATGAC GGCC-GCCGCC         TACTTCAAGGAGCGA  52 58
CXD87_RS08330 1713849 .. 1713864 +  -4.6  -2.84454   CGCATTCAGGCAAAA              TGTCGG CTGT CCGACC               CTTTAAGTCCTTTAT  44 90
CXD87_RS08335 NONE
        tadA NONE
CXD87_RS08345 1716229 .. 1716275 +    -7  -4.56597   AGCACACCCACTGAA CGCAGGCCCCGCTACGTGTCCT GCC GGGGCACCCAGGCGGGCTGGCG TTTTTCCAGGAAAGA  77 27
CXD87_RS08370 1722841 .. 1722884 + -12.2  -3.28924   GGCATCGAGGCGTAA GCGGGGCGCCCGC-GCGCGGC CTG GCCGCGCCGCCCGCGGCATGC TTATAACGACAGGTA  71 26
CXD87_RS08375 1723804 .. 1723827 + -17.4  -2.61695   TCATACCGATACCGT          GTCGCGGGCC CGCC GGCCCGCGGC           CTATTTGCCGATCCC  80 57
CXD87_RS08380 NONE
CXD87_RS08385 1725630 .. 1725652 + -11.9  -3.15544   AATACGTCTGAACCA           CGCGCGGGC CTGGC GCCCGCGCC           TTCATCGCCATGACC  66 30
CXD87_RS08395 1727999 .. 1728027 +  -2.9  -3.59738   GCCTTGGCGCGCATG        GCGTCCTTGACCG AGT CGGACAGGCGGGC        TTTGAGCGTATCGTG  50 464
CXD87_RS08405 NONE
CXD87_RS08410 1729896 .. 1729933 + -11.4  -2.67021   GTAGGTCCGGCCGCG  CCGG-CGGCGGCC--AACC TTA GGTTATGGCCGCTGTCCGG  ATTGCTATTTGGCGC  61 37
CXD87_RS08415 1731515 .. 1731525 +  -8.2  -3.06796   GCATCCAGCAGTTCG                 CGGC GCT GCCG                 TTCGATCAGCTCGGG  55 248
        mltG NONE
CXD87_RS08440 1737926 .. 1737945 +  -2.8  -3.16564   GAGCTGGTGGCGCAA            GCGGCATGA GCC TCG-GTCGC            TTCCTGCCCTGGCAG  44 17
        holB 1738988 .. 1739001 +  -9.5  -4.03078   CCTGCCAGTGACGAT               CGGGC CACG GCCCG                TTTCTCCTGTGATCC  75 30
CXD87_RS08450 NONE
CXD87_RS08455 1740759 .. 1740778 +   -15  -5.52384   CTCCACCTGATCACG            TGCCGCCC ACCG GGGCGGCA             TTTTTTTGCTCGGGG 100 94
CXD87_RS08460 1741640 .. 1741657 +  -5.6  -4.67982   GATGTATCCCTGTGG             CCGTAT CCATCC ATACGG              TTTTCTTCACTCCAA  77 39
CXD87_RS08465 1742608 .. 1742623 +  -2.5  -3.90744   CATCTACAACCTGTG              CAGCG TATACC TGCTG               TTCTTTCGCGGCACG  56 189
CXD87_RS08475 1743954 .. 1744010 +  -7.3  -3.65902   GATACGCGCCGCCTG GCCCA-CATCGT--CG-CGCTGGGGCAGG ACG CCGGCGCCGGCGACGCCGCGGTGCTGGGC TTTGCCTGCGATGCC  61 100
CXD87_RS08485 1746349 .. 1746377 + -19.6  -3.04398   CGCATCGGCGTACCA       GGCAGCCGGCCCC GCAA GGGGCCGGC-GCC        GTTTTCAGCGCAGGC 100 68
CXD87_RS08565 NONE
CXD87_RS08570 1761990 .. 1762006 +  -2.9  -3.71645   TTGTATCCTATGGCT              TGGATGG CAT CGGTCCA              TTTCAATATGACGTT  53 98
CXD87_RS08575 1763074 .. 1763098 +  -6.3  -5.24129   GGCCGTCGATTTCGG          GTGAGGGGCCA GCC TGGCCTTGCGC          TTTTTTCTCCAGCGC  93 173
CXD87_RS08590 1778545 .. 1778568 +    -3  -3.40403   GCGGCCTGCCGCCGG          CTCGGCGCAT GGGG ATTCGCAGGG           TTCTCATGCGCCGGC  48 47
CXD87_RS08595 1779096 .. 1779106 +  -3.2  -4.45261   ATGGTCGGCTTGTCA                 CGAG ATT CTTG                 TTTTCCATTTCTTTC  69 85
CXD87_RS08600 NONE
CXD87_RS08605 1782702 .. 1782733 +    -3   -3.9941   GAGCCAGATATTCGC     TGAC-CGC-CGGGC CGCCGT GCCCGCGCGCGTAA      TTTCCTTCTGCGGGG  58 23
CXD87_RS08610 NONE
CXD87_RS08615 1785583 .. 1785598 +  -4.6  -2.78384   GCGAGAACGCGGCCG              CGACGC TACA GCGTCA               TGTGCTGCGGCAGCC  43 46
CXD87_RS08660 1793812 .. 1793840 + -14.6   -3.6106   AATCCATCATGCATC       GGCGCGCG-CCCGC TGG GCGGGGCGCG-GCC       TTTCCCCCTGTTACG  81 40
CXD87_RS08665 1797537 .. 1797594 + -16.2  -2.71712   CGGGCACACCGTCAC GCGC-AAGGCGGGCTGGTCGCGCCGGT CATGC ACCTGCAGGGTCAGCCCGCCATCGCGC ATTTCGAACAAGGCG  77 63
CXD87_RS08680 1800709 .. 1800755 +  -8.6  -4.18018   CCACGCCCAGCGCGC CGCGCAC-CGCGTGGTTGCCC ACCACC GAGTAGCCGCGCGCGCGCGTG TTTTCGATCAGGCGG  75 197
CXD87_RS08690 1802491 .. 1802508 + -12.7  -4.19735   CTCGAGCGTGAAGAA             GACGCCC GCGA GGGCGTC              TTTGCTTTTGGAGCC  91 53
CXD87_RS08700 1804407 .. 1804420 +  -9.5  -2.81966   GGATGCGCGGCCGCG               CGCCG TCAC CGGCG                TGTCATGGCATTTCC  56 85
CXD87_RS08705 NONE
CXD87_RS08710 1806952 .. 1806977 + -19.1  -4.56597   TACGCCAAATGAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 29
CXD87_RS08730 NONE
CXD87_RS08735 NONE
CXD87_RS08740 1812647 .. 1812657 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS08745 NONE
        tilS 1814814 .. 1814836 +    -9  -3.28924   AAAATACTCAGCTTT           GCCCGCCCAG ACC CTATGCGGGC           TTGTCAGCCAGAGTA  61 83
CXD87_RS08755 NONE
CXD87_RS08760 1816310 .. 1816331 + -14.5  -5.45802   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 37
CXD87_RS08770 NONE
CXD87_RS08775 NONE
CXD87_RS08780 NONE
CXD87_RS08785 NONE
CXD87_RS08790 NONE
CXD87_RS08795 NONE
CXD87_RS08800 NONE
CXD87_RS08805 NONE
CXD87_RS08810 NONE
CXD87_RS08815 1826052 .. 1826062 +  -2.4  -2.66316   TTCATTGAGCGTGGA                 CACC GAC GGGG                 TGATGTCGTGCACCA  38 477
CXD87_RS08825 1828177 .. 1828219 +  -8.2  -3.25073   CACAGCGGCGGCTAT CCCGCGCGCCAGGCGCTCG AACAGG CG-GCGCCCGGCCGGCCGG TGTTCCTGTTGCGCC  58 408
CXD87_RS08835 1830254 .. 1830276 + -10.6  -2.70932   TCGCTGTTCGGTGCG           CCATGAGCGT GCG ACCCTCATGG           TGGTTCGCCGCGGCG  60 20
CXD87_RS08840 NONE
CXD87_RS08845 1832167 .. 1832183 +  -5.1  -4.12198   TCCCTTACAGGCGGG              CAGGC CGGCGGC GCCTG              TTTTACAACCTTGTA  64 45
CXD87_RS08850 1832363 .. 1832390 + -18.6  -5.04385   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC 100 83
CXD87_RS08895 NONE
CXD87_RS08900 1841023 .. 1841043 +  -4.5  -3.19157   TTGCCGCTGCATGGG            CGGCCCGCT CCA GGCGGCCAG            TTCGTCCGCTTCGTC  47 99
CXD87_RS08925 1847359 .. 1847372 +  -9.5  -3.53091   CCTGTATCGCCGCAC               CCGCC GCCG GGCGG                TTTGAAAAGCCGGCT  64 7
CXD87_RS08930 1847515 .. 1847539 + -17.2  -4.98531   GCGCCAATATGAAAA          GCCGCCATGC CTTGT GCATGGCGGC          TTTTTGCTTTGGGCG 100 35
CXD87_RS08935 1848225 .. 1848244 +    -5  -4.20696   AAAATACTAGGCGAA            TTAAAGCG TCAA CGCTCTAA             TTTTCGGCTTGGTCG  66 43
CXD87_RS08940 NONE
CXD87_RS08945 1850866 .. 1850891 +  -3.3  -3.61517   TGCGGCTACCGCCGC        TGGC-G-CGCC TGAACC GGCGACGGCCA         TTATTCGCGCGAAAT  49 82
CXD87_RS08950 NONE
CXD87_RS08955 1854025 .. 1854039 +  -3.4  -3.96051   GCGCGGCATCATCAA               CGAGGC TAC GCCATG               TTTCATCTGTTCTGT  58 131
CXD87_RS08960 1855071 .. 1855099 + -15.2  -3.53012   GGGCGCAACCATCCC        GCTTGCCCGGCC CCGGC GGCCGGGCGCGC        TTTCCGGAGCAGGCG  81 41
CXD87_RS08965 NONE
CXD87_RS08970 1857171 .. 1857219 + -18.2  -2.90075   GGTGCTGGCCGAGGT CGTGC-CCTAGGGTGCCTGTCCC TGCG GGGACAGGCACCCTTGCCGCAGG TGTCGTTCCCCGGGC  86 16
CXD87_RS09000 1865899 .. 1865927 + -10.1  -3.06915   CAGAACGTTCAGGCC        GCGGGCGCGCCGC ATG GCGGCGTGGTGGC        TTCGGTCGCCTACCT  60 125
CXD87_RS09005 NONE
CXD87_RS09010 1867396 .. 1867415 +  -4.2    -3.889   ATACGGGCATCCCGG            GGTATGGCG GCT CGCCG-GCC            TTTGCTATCCTTGCG  57 62
CXD87_RS09015 NONE
CXD87_RS09020 NONE
CXD87_RS09025 NONE
CXD87_RS09030 1873807 .. 1873861 + -15.7  -2.71364   GGGGCGGAGAACGAG TAGGCGG-GGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCGTGCCAACCGTCAA TCGTTGACGAAGTCC  75 23
CXD87_RS09040 1875460 .. 1875471 +  -7.2  -4.59773   TCTATATCCAGCATG                GCGG CGCT CCGC                 TTTTTCGGGCTCAAG  79 84
CXD87_RS09060 NONE
CXD87_RS09065 NONE
CXD87_RS09070 NONE
CXD87_RS09075 1881540 .. 1881556 +    -3  -2.78679   CGGGCGAGGGGGCCT              GAGATG CGCGC CATTTC              CTTTCCGTCCCGGCG  40 24
CXD87_RS09080 NONE
        cpaB 1882937 .. 1882951 +  -3.5  -3.01791   GTGCGCGGCGGCGAC               GTGCA GGCAG TGCGC               TATTGACGAACAGCT  44 5
CXD87_RS09090 NONE
CXD87_RS09095 1885741 .. 1885764 + -12.4  -3.16564   CCGCCATCCATGGAA          TTCGGCGCCG CGGG CGGCGGCGAA           TTCATCGCGTCCGAA  69 58
CXD87_RS09105 NONE
CXD87_RS09110 NONE
CXD87_RS09115 NONE
CXD87_RS09125 NONE
CXD87_RS09130 1893888 .. 1893924 +  -4.4  -3.04398   CCGAAACGGCCGATG   GCGTGG-CCGATCCG TAACCGGC CGGGTTGGGCCACGG    GTTTTACGAAACCGC  45 9
CXD87_RS09135 1894728 .. 1894743 +  -3.2  -3.83318   GTATGGCGGGGCGGG              GCATAG GCGG CTACGC               TTGTATTATTGCCGG  56 74
CXD87_RS09140 NONE
CXD87_RS09145 1896088 .. 1896114 + -11.5  -3.65351   GGTCCGGCGCCGGTT        CGCCGGCGCCGC GGCC GCGG-GCCGGCA         TTTCCGTCCAGCTCG  75 105
CXD87_RS09150 1896700 .. 1896712 +  -2.6  -3.29471   GCTGGGCGAGCCCCC                GGTC CCTTC GGCC                TTCGTATCATGAACG  44 1
CXD87_RS09155 1897201 .. 1897220 + -16.4  -3.75629   CCGGGGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG  88 95
CXD87_RS09175 1901513 .. 1901525 +  -7.7  -2.71144   GCCCTCCAGGCCCGT                GACGT CGA ACGTC                TCGTTGCCCACGATG  49 311
CXD87_RS09190 1907470 .. 1907495 +  -4.7  -3.06696   GCAATGCTCGCCTGG         CGCAGGAC-TGG GGT TCACGTCCTGCA         TGTCTTGAAACGCAA  45 133
CXD87_RS09195 1908505 .. 1908539 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 271
CXD87_RS09225 NONE
CXD87_RS09230 1914670 .. 1914689 +  -9.2  -2.72344   GCGCGCATGAACAGC            GGCCTGGC CTGC GCCACGCC             TGCTTCGAAATCGGC  52 243
CXD87_RS09240 1915166 .. 1915184 +  -4.4  -3.66018   GGGTGAACAGGCCAG             CCAGCCGG TGC CCGACTGA             TTCTTCCCATCCTCC  55 7
CXD87_RS09245 NONE
CXD87_RS09250 1917243 .. 1917289 +  -7.2  -3.55444   ACAAAGGGGAGCCAG GCGGCGG-TC-CGCCTGCCGGT CGGAA ATCGGCGAGCGTGTTCCGTCGC TTTACGGAATCGGAG  58 339
CXD87_RS09255 1918001 .. 1918035 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 262
CXD87_RS09275 1921866 .. 1921899 + -15.9  -2.70932   GCGCGCGGCCGCGGC     CGACGTGGCCGGCGC CGGC GCGTCCGCCTCGTCG      TCCTTGAAGCGGCGC  75 93
CXD87_RS09290 1924477 .. 1924533 +  -7.2  -4.64334   GCAAGGCGCGTGCGG CCCT-GTCCACGCGCGGCGGCCCC-CC GCGCAA GGCGGGGCAGCCGC-CGCCAACCAGGG TTTTGTTGCGGCGTT  79 173
CXD87_RS09295 NONE
CXD87_RS09300 NONE
CXD87_RS09305 1927080 .. 1927118 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CXD87_RS09310 1930343 .. 1930353 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf 1930528 .. 1930562 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CXD87_RS09335 1934458 .. 1934480 +  -4.7  -2.70932   TGAACGGCCGATGCT           GCAGCAGCG GGTGG CGCAGCTCC           TCGTTGGCGCGGCGC  43 296
CXD87_RS09380 1942935 .. 1942945 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 180
CXD87_RS09385 1943984 .. 1943994 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS09390 1945143 .. 1945182 +  -8.4  -3.60098   AAGCGCCGTGGCAAA  CACAGGAGTCGCCCGCGCG TTG CGCGTGCGCGGC-CATGGG  TTTACGCTAGCGCCT  62 170
CXD87_RS09395 1947440 .. 1947453 +  -5.9  -3.82824   GCAGGTCGGCCAGGA               CGGCG TCGA TGCCG                TTCTTGTCGATCGTG  63 408
CXD87_RS09420 1951667 .. 1951721 + -11.8  -3.84712   CTATTGACAGTTCAC AGCTAGGATGCCGCCGACCCCGGCGC CAT GCGCCGGGGTCGGCCGTCGCAAATCA TTTCATCTCCAATTG  79 20
CXD87_RS09425 1953245 .. 1953257 +  -4.7  -2.71712   GTCGCCGGCCCCGTA                CGCCG GAG CGGCC                CTTTCCCGGGCCGCG  43 145
CXD87_RS09430 NONE
CXD87_RS09435 1955467 .. 1955486 + -11.4  -4.11692   CGATATGATGGAAGA            CGGTCACC AGTG GGTGGCCG             TTTTCCCAATCGCTC  82 78
CXD87_RS09440 1955896 .. 1955911 +    -6  -2.83112   GGCCGCTGAGGCATG              CCGCGG CGAG CGGCGG               TATGATCGATTGCAT  48 32
CXD87_RS09445 1957211 .. 1957238 +  -2.5  -3.08679   CTGCGGCGAGGGGGG        GGCGCAGTGGC TACAAT GCCGCGATGCC         TATTCGCTACACCCC  42 87
CXD87_RS09450 1958068 .. 1958080 +  -3.3  -3.78793   GGCCGCCGCAAAGCA                GGCTA CCA TCGCC                TTATTCATAATTATG  56 89
CXD87_RS09455 1958926 .. 1958953 +    -9  -3.01712   GCCGCCGGCGAAAGC        GCCGGCCTGATC GCCC GGCTGGGCCGGC         TGTTCGAGCGAGACA  57 69
CXD87_RS09460 NONE
CXD87_RS09465 1961397 .. 1961426 +  -8.5  -2.62983   AGCGCTTCAGGACGG       TGGCGCGCAAGGCC GAC GACCTGGC-CGCCA       TCCTGTACACGTCCG  52 485
CXD87_RS09475 1963681 .. 1963704 + -13.8    -4.015   TGAGGGACGAAAGGG          GAGCGGCGCC GGCC GGCGCGGCTC           TTCTTTCATCGCTGG  84 53
CXD87_RS09480 1964329 .. 1964348 +  -5.6  -3.32343   GTGAAGTAGGGGTTG            C-GCCGTCC CGC GGCCGGCCG            TTCTAGGGATATCCC  51 32
CXD87_RS09485 1965463 .. 1965494 + -20.8  -2.71712   TCAAGTAATCGCGTA      TTCGGCCGGGCGCC GCGC GGCGCCCGGCCGGC       ATTTCCACCGAACAC 100 33
CXD87_RS09495 1967482 .. 1967525 + -10.9  -3.14344   GGTTGCGCGCGGACA GGCGCAGGCCG-G-GGCCGGG CAGG CCCAGCAGCACCGCCTGCGCC TTGATCAAGGCGATG  64 257
CXD87_RS09505 NONE
CXD87_RS09510 NONE
CXD87_RS09515 1970690 .. 1970706 +  -2.1  -4.62069   GCGCGCTTTTACCTC              CGTGAGG AAT CCATGCG              TTTTTCGCCTCAGCG  70 266
CXD87_RS09520 1972035 .. 1972066 +   -15  -4.26076   GCCAGCAGTCCTAAG      CGGCGCGCGGCGCC CGAC GGCGCCGCGTTCCC       TTTTCGTGAGCATCG  95 27
CXD87_RS09525 1975532 .. 1975563 +  -6.5  -3.61398   TGGCGCCGCAGGGCG      C-CACGCCGGCCGA CGAGA TCGGCTGGTGCGAG      TTCTTCCGCGACGCG  56 227
CXD87_RS09535 1977569 .. 1977587 + -11.6  -2.56271   GCGGCCACGCCTGAA             GCAGGGCG GGG CGCCCGGC             GTATTATCATCACGA  61 27
CXD87_RS09540 NONE
CXD87_RS09545 NONE
        uvrC NONE
        pgsA 1981699 .. 1981709 +  -8.2  -3.85698   GTGGCGGGCTGGTTC                 GCGG CCG CCGC                 TTTCTGGAGACCGCG  68 111
        aceA 1985502 .. 1985540 + -13.7  -2.90392   TCAAGGCGGCGTGAT  CGGGC-GGCGCCCGCCCC GCAT GGGGCCGGCGCCAGCAAG   TGTAGTTGCAGGGTG  71 27
CXD87_RS09575 NONE
CXD87_RS09580 1986964 .. 1986980 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD87_RS09605 NONE
CXD87_RS09610 NONE
CXD87_RS09615 NONE
CXD87_RS09620 1994076 .. 1994089 +  -2.4  -4.25658   CACGACGGGAACGCC               TCGT ATGACA ACGA                TTATTTTCATCGCCT  62 43
CXD87_RS09625 NONE
CXD87_RS09630 1995635 .. 1995650 +  -6.1  -3.20382   CGTCGATCGACTCCT              GCGCT TCGGCC AGCGC               TTCGTAGATCTGGAA  50 100
CXD87_RS09660 NONE
CXD87_RS09665 2005181 .. 2005191 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS09670 NONE
CXD87_RS09675 NONE
CXD87_RS09680 2007784 .. 2007802 +  -6.8  -3.28712   ATGCCTAAGCCATAA             GATGTATT ATA GATACATC             TTATAAACCGCAGGA  54 442
CXD87_RS09690 NONE
CXD87_RS09695 NONE
CXD87_RS09700 2009927 .. 2009943 +  -2.1  -3.08046   CCCAAATCTGCGAAA              ATCCGCC GTT GGCCGAA              CTTTTGCAGTGAGAA  42 60
         xth NONE
CXD87_RS09710 2012348 .. 2012359 +  -2.2  -2.90571   CCGCTACCAAAACGG                C-CGG AAT CCGTG                TATAGTTGCGGACTT  40 82
CXD87_RS09715 2012471 .. 2012498 + -12.8  -5.63517   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC 100 42
CXD87_RS09750 2018759 .. 2018786 + -18.4  -2.50443   CAGACGCCTCCCGGC        CAGGCGCGCGCA CGCC TGCGCGCGCCCG         CTTCCTGCCCTCTCC  87 406
CXD87_RS09770 2022999 .. 2023017 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 249
CXD87_RS09800 2028496 .. 2028506 +  -2.4  -2.71461   AGCAATCGGCATTGC                 CGCC ACG GGCC                 TCGGTTTCCTATTCT  38 101
CXD87_RS09805 NONE
CXD87_RS09810 NONE
CXD87_RS09815 NONE
CXD87_RS09820 2033720 .. 2033766 + -17.2  -3.56821   CAGCGGCGCAGGCCC GTCGCCGCC-GGCCGGCGCGG CGTCCC CTTCGCCGGCCTGGCGCCGGC TTTCCAGGATCTCCT  93 418
CXD87_RS09835 NONE
CXD87_RS09840 NONE
CXD87_RS09845 2037310 .. 2037344 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 213
CXD87_RS09865 2039744 .. 2039754 +  -2.4  -2.71712   CCGCTTGCCGGGATA                 CTGG GGG CCCG                 CTTTCGCCCGCGAGA  38 75
CXD87_RS09870 NONE
CXD87_RS09875 2042771 .. 2042802 +  -6.4  -3.23216   CAGACGCGATTGACG      CGCGCC-GCCTCGGG CCC CTGGTGGCCGGTGCG      TTCGTGCTCGTGCGG  50 480
CXD87_RS09885 2043969 .. 2044026 + -21.1  -2.83403   GTTTAATAGCAACAT CCTTCGTCCTTCGAACCGCCGCCCGGC CCAT GCCGGGCGGCGGCCCGGGCGATGGCGG CTTTCCTGGCGGCGC 100 102
CXD87_RS09890 2044801 .. 2044827 +   -10   -3.5393   CCAACCGCGATCTGG         TGGCCGCCCTGC TCA GTTGAGCGGCCA         TTTGCGCCGGATCAT  67 6
CXD87_RS09895 2047049 .. 2047069 +  -5.3  -3.57144   CGATGGGCCCGGGCA            GCAGCCGCT CGA AGCGGATAC            TTTGCGCGTCCAGGC  54 514
CXD87_RS09910 2048460 .. 2048511 + -11.6  -3.14931   CGCGCCCGGCTCAGT C-GGCCGGCG-CGCGCCGCACCG-CG GCGT CGACGATGCG-CTCGGCGCCGGCCAG TTGCTGCGCCATCCC  66 41
CXD87_RS09920 2049352 .. 2049383 + -24.6  -2.82759   TACGGAAGGATTCGG      CAGGAGCCTGTCCC CGTC GGGACAGGCTCCTG       TGTCATAGGTATCTT 100 121
CXD87_RS09930 2051180 .. 2051198 + -10.2  -3.01712   AGGTCGTAGCGCATC             GCCGCCAG GCG CTCGCGGC             TGTTCAGCGGCAGGA  59 358
CXD87_RS09940 2053168 .. 2053183 + -10.4  -2.78384   GCCAGCTCGGGGTCG              TCGCGC AGCC GCGCGA               TATAGTCGGCCACCC  56 498
CXD87_RS09955 2055734 .. 2055756 + -11.3  -2.70932   TGGCGCTGTAGCTCA           CCAGCAGGC ACTTG GTCTGCTGG           TAATTCGACAGCGCC  59 148
CXD87_RS09965 2059508 .. 2059542 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
CXD87_RS10010 2067478 .. 2067512 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS10020 2069376 .. 2069403 +  -5.5  -3.66058   CGCCGCGCCCGCCGC        CGC-CGTGGCGC AACCC GCGCCATGAGCA        TTCTCTATCTGCTGT  57 1
        ccoS 2069923 .. 2069946 +  -7.4  -3.28924   TCGTATTACGTGGTG          CAG-CGCACCT GTC AGGCGCGGCTG          TTCTGCGACAAGCTG  56 408
        ccoO NONE
CXD87_RS10040 NONE
        ccoP NONE
        ccoG NONE
CXD87_RS10055 NONE
CXD87_RS10060 2075001 .. 2075018 +  -3.3   -3.6761   GCGGCCAGGACGAGA             CGCCGTT CTGA AGCGCCG              TGTTTGTTGCGACGC  53 15
CXD87_RS10065 NONE
CXD87_RS10070 NONE
CXD87_RS10075 NONE
CXD87_RS10080 2078614 .. 2078641 +  -6.2  -3.01712   GGCCCGGATGGTGGC        GGCCGTC-AGCTG CGC CAGCGCGACGCCC        TGTTCGGGCCCGGCG  48 476
CXD87_RS10090 NONE
CXD87_RS10095 2080393 .. 2080432 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD87_RS10100 2081799 .. 2081823 +  -4.9  -3.77087   AGAGCCGACTTGTAA          TCGGCCTCG GTGCGTA CGGGGCGGA          TTTCCATGTTCACTC  58 361
CXD87_RS10110 2082878 .. 2082895 +  -8.3  -3.67954   GGCGCGGCTGGGGTG             GCGCAGC TTGC GCAGCGC              TTTGGCCTCTATTTG  67 483
CXD87_RS10215 2107687 .. 2107705 + -17.4  -3.15544   TCTGAACGCAAGGGC             CCCCCGGC GCG GCCGGGGG             TTCCTGCCCATGGCA  84 36
CXD87_RS10230 2110674 .. 2110684 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS10235 2111667 .. 2111706 +  -9.4   -3.5361   CCTGGGCGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD87_RS10245 NONE
CXD87_RS10250 NONE
CXD87_RS10255 2114497 .. 2114519 + -11.2  -3.57144   CGACGCGCTGGCCGC           GCTGGCGCGC CGC GCGCCCTAGC           TTTCGCGCTCGCCCG  70 4
CXD87_RS10275 2117250 .. 2117269 + -16.4  -3.90112   TCGCGCCAAGACAAA            CGGCCCGC TTGC GCGGGCCG             TTTGCTTGCCGGCAG  93 53
CXD87_RS10365 NONE
CXD87_RS10370 2138102 .. 2138120 + -17.4  -3.10522   GTACGCCAAAAAAAA             CCCGGGCC AGC GGCCCGGG             TCTGTTGCGTCGCCT  84 135
CXD87_RS10425 2149959 .. 2149969 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 86
CXD87_RS10430 2151327 .. 2151342 +    -6  -2.50699   CAGGTCGAAATGCTC              GGCGGC AAAC GCCACC               ATATCTTCCTTGAGC  44 379
CXD87_RS10490 2161850 .. 2161878 + -19.7  -4.15508   GGCACGGCCGGCATC        GAGAAGCGGAGCC CAT GGCTCCGCTTTTC        TTTTGCGGCTTGCTT 100 45
        lexA 2162659 .. 2162673 + -12.8  -4.74103   CTACGCGGGCTTGCT               GCCCCC CGA GGGGGC               TTTTTGCCTTGGGGC 100 75
CXD87_RS10580 2177368 .. 2177392 + -22.9  -4.11692   GATAGCCGAAAAAAA          CCGGGCCCGGA TGA TCCGGGCCCGG          TTTTGCGGGTCGCTG 100 91
CXD87_RS10605 2184220 .. 2184245 + -14.7  -5.14563   GGCGCGCAACAAAAA         GCCCCACTGCC GCGA GGCAATGGGGC          TTTTTTCATGCGGCC 100 45
CXD87_RS10640 2188749 .. 2188785 +   -21  -4.59773   TTCGCGTGCGCAGTC    GAACTGCCGCCATCCC CACAA GGGATGACGGCAGTTC    TTTTTACGGATGGGG 100 70
        dapD NONE
CXD87_RS10660 NONE
CXD87_RS10665 2193134 .. 2193144 +  -4.6  -2.64912   GCGAACAATTGAACA                 CGTG ATA CGCG                 CTTCTGGCTTGACCC  42 21
CXD87_RS10670 2195109 .. 2195119 +  -2.4  -3.58365   GCGCAGCGTAAAACC                 AGCG AGA CGCA                 TTATCTCCTATACTC  48 74
CXD87_RS10675 2198495 .. 2198509 +  -7.1  -3.53012   TGCGGCTTTGCGCCA               GGCTG AGATA CAGCC               TTTCCCGGGCCCGGG  58 488
CXD87_RS10690 2202392 .. 2202426 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS10705 NONE
CXD87_RS10710 NONE
CXD87_RS10715 2209730 .. 2209745 +    -6  -4.08945   CACCACTTTGACAGG              CGGCGC CGCC GCGCCC               TTTTCCCGCCATGCT  66 104
       coaBC 2211130 .. 2211182 +  -9.2  -3.53174   CCTCGATCAGCGAAT GCGACAGCGACAGCCAGGCCAGCGC CAGAAA GCGC-GGCCGGGCT-TC-CAGTTGC TGTTTCTCCGCCTCT  61 191
CXD87_RS10730 2212514 .. 2212536 +  -6.8  -2.84298   AGGACGAGCCCGTGG           TCGCCGTGCC CGC GGCGCCGCGC           TAGTTGTGAACTGTC  50 0
CXD87_RS10760 2217658 .. 2217674 +  -2.1  -3.61398   AGCAAGGTATGGCCG              GCCAGCC GGC GGATGTC              TTCTTCACCGCGCAA  50 223
        cphA 2223166 .. 2223186 + -15.4  -3.61398   TTCGCCCCTCTTGCC            GCGCCGCC CGAAC GGCGGCGC            TTCTTCGACGACAGG  83 50
        cphA 2225844 .. 2225861 + -14.1  -5.28176   CTCAAATGTAACTTG             GGCCGGC GCAA GCCGGCC              TTTTTTCTCCCTGCG 100 84
CXD87_RS10785 NONE
CXD87_RS10790 NONE
CXD87_RS10795 2226888 .. 2226909 + -15.9  -5.86965   CGCCGTACGTGTACC           GCCTTCGGG TTCG CCCGAAGGC            TTTTTTTTGGTGCCT 100 73
CXD87_RS10815 2229373 .. 2229391 +  -5.9  -3.16564   GCTGGCTCAGCCTGC             GGCCGAC TGAGC GTCGCCC             TTGATGGCCTCGGCG  51 16
CXD87_RS10825 2232296 .. 2232322 +  -5.1   -2.8352   CGAGCTGGCCACCAT        CCGGC-CCGCCGT CTG ACG-CGGAGCCGC        CTTGTTCAGTTACCG  46 10
        rlmJ 2233569 .. 2233611 +  -8.8  -3.28924   CACCACGCCCAGCGC CGCCCGGCGCAGGCCCGGCG CGA CGTCCGGATAGCGCGCGGCG TTCTCGCCGGCGATG  59 407
        cueR 2236428 .. 2236450 +  -8.3  -3.29144   CGGCCGCCTCGGCAA           GGCGCTCGG CCTCC TCGCGCGCC           TTCTGCCGCGCCTGG  58 72
        plsY 2243779 .. 2243807 +  -2.9  -3.86015   CCACCGCGCGCCGAT        GACCGCGAGTTGG TGC CCAAAGCGAGGAC        TTTGTGGGACAGATA  56 162
CXD87_RS10895 2245303 .. 2245330 +  -9.8  -2.52464   GGCGCGGATGGCCTT        GGCCGCCAGC ACCTCGAC GATGGCGGCC         TGCGTTGCCGCCGCC  55 402
CXD87_RS10905 2247515 .. 2247545 + -18.3  -3.58343   CGCGCGCCTCGCCCC       GCAAGCAGGCCGC CTCGC GCGGCCTGCCTGC       TTTCGAGGTCGTCAA  90 49
CXD87_RS10915 2249355 .. 2249370 +  -4.6  -3.64703   AATTCCAGTTGCGCG              CCGTCG GCGT CGAAGG               TTTCGCTGCGCACGC  54 146
CXD87_RS10940 NONE
CXD87_RS10945 NONE
CXD87_RS10950 NONE
CXD87_RS10955 2258488 .. 2258498 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS10960 2259679 .. 2259693 +  -8.5  -3.35813   TGCCTGGAATAAGGG               GCCGC TCGGC GCGGC               TTCGTTAACCTCGAC  59 202
CXD87_RS10985 2265107 .. 2265120 +  -8.1  -3.06261   CGACCTGCGCCGCCA               GCTCG GCTT CGAGC                TGTTCCGCGTTCGCG  52 279
CXD87_RS10995 NONE
         alr NONE
CXD87_RS11010 NONE
CXD87_RS11015 2272880 .. 2272895 +    -6  -3.53811   CGCAGCATGCGGTCC              GCGGCG GTCT CGCCGG               TTTCCACCACGTAAC  56 158
CXD87_RS11030 2275021 .. 2275054 +  -2.3  -3.60792   GTAGTCCCCATACGT     CGCGTCGTAAGTTTT ACGG AAGACGTTCAGCGCG      TTGTATCTGAATGCT  48 37
CXD87_RS11035 2276209 .. 2276219 +  -2.4  -4.07568   CACCACCGCCAGCGT                 GCTG ATG CTGC                 TTTTCCGAACCCGGG  58 448
CXD87_RS11145 NONE
        sycN NONE
CXD87_RS11155 NONE
CXD87_RS11160 NONE
CXD87_RS11165 NONE
CXD87_RS11170 NONE
CXD87_RS11175 NONE
CXD87_RS11180 2297821 .. 2297842 + -12.9  -3.01712   TCGCCGCCGACCTAG           ACGCCGCGC GTCA GCGCGGCGA            TATTCGGGGCCGAGG  70 65
CXD87_RS11190 2300052 .. 2300064 +  -4.1  -3.55444   AGGCGGTCGCCCGAG                TCGAG GTC TTCGA                TTTCCACGGTCGCGC  51 511
CXD87_RS11200 2303103 .. 2303143 +  -3.2  -3.28712   CGTAGCGGTCCAGGT CCT-GTCCG-GTCATGGCGG CGA CCGCCTTCACGTGGCCCAGG TTCTCGGCCACCAGG  47 523
CXD87_RS11210 2304390 .. 2304414 + -11.4  -3.14344   TGGCGCAGCGGCTGG         CGGCGCG-CTG AAGC CGGCCGCGCCG          TTGATGGCGCGCATC  66 15
CXD87_RS11215 2305989 .. 2306023 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS11250 NONE
CXD87_RS11255 2314109 .. 2314125 + -15.1  -3.05384   GGCTGCGCCGAGACG              GCCGGCG TGG CGCCGGC              TTCGGTCGGCAGGCC  74 475
        htpX 2316493 .. 2316512 + -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 52
CXD87_RS11285 NONE
CXD87_RS11290 NONE
CXD87_RS11300 NONE
CXD87_RS11305 2324732 .. 2324787 +  -5.5  -2.82623   GGTTGGACGCCACCA CCACATCGAACCAGTCCGGGTGCTGCAC GAA GTGC-GCGCACAGGATG-T-CGATGTGG TACTTGTCCCAGCGC  44 400
CXD87_RS11320 NONE
CXD87_RS11325 NONE
CXD87_RS11330 NONE
CXD87_RS11335 2332854 .. 2332888 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        gabT NONE
CXD87_RS11350 NONE
CXD87_RS11355 NONE
CXD87_RS11360 NONE
CXD87_RS11365 NONE
CXD87_RS11370 2340196 .. 2340252 +  -3.7  -3.53012   GGCGCGTCACCATGC CGGTGAC-CGGCTCGCCGCGCAGGA AGGCGCGGA TCTTG-GCCGCCAGCTGCGCCACCG TTTCGCGGCGCAGGC  49 65
CXD87_RS11380 2343079 .. 2343095 +  -2.1  -3.17051   TATCATGCCTATCAG              GCCCGAT TGC ACCGCGC              TGTTGCTGGTGCCGG  43 498
CXD87_RS11395 2346469 .. 2346487 + -17.4  -3.55622   AGCGCAATAACCGTC             CGGGCGGC CAT GCCGCCCG             TTTCCCGGCCTTGCC  89 31
        purD NONE
CXD87_RS11405 NONE
        nadD 2349417 .. 2349429 + -10.5  -3.93489   TCCGCCACATCGACA                CCCGC GCC GCGGG                TTATATTTATCGTTA  77 60
        rsfS NONE
        rlmH NONE
CXD87_RS11425 2351394 .. 2351424 +  -7.5  -2.73364   GATACGGCGCCCGCC      GCGCAGCAACGCGC CCAG GC-CGTGGCTGCGG       TGCTTGGCATCGACC  49 472
CXD87_RS11460 NONE
CXD87_RS11465 NONE
CXD87_RS11470 2362661 .. 2362680 +  -7.8  -3.67597   ATCTAGCGCATCGGG            CCCGGCATG CAG CG-GCCGGG            TTCTTCAATAGCGCC  63 35
CXD87_RS11485 2365985 .. 2366005 + -15.4  -2.57132   CAGGCGCTGGCGCTG            GCCGCCCG ACAGG CGGGCGGC            ATTCTGGCCCACCGG  69 298
CXD87_RS11495 NONE
CXD87_RS11500 NONE
CXD87_RS11505 2369650 .. 2369688 + -19.7  -3.01712   AGCTGACATCCGCGG  C-GAGGTGTGCCTGTCCC CACT GGGACAGGCACACCGCAG   TGTTGACGGGCGCCG 100 84
CXD87_RS11520 2373987 .. 2374026 +    -2  -3.44527   CTCGCGTAGCGGCGC GGGCAGGCT-GCCCGCGG CAGCCA CCA-GGTCGAGCCAGCCC  TTGTCGTAATCGGTG  47 463
        lpxO 2381866 .. 2381901 + -20.4  -2.53015   TGGCACTCTAACCAC    CCGGGTGCCTGTCCCC GCGG GGGGACTGGCACCCGC     TGACTTGGCGCCTGT  95 30
CXD87_RS11560 2387406 .. 2387460 + -13.5  -3.04322   TGGTTTTCATCAAGA AGCTGTAACCAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTAAA-ATGGCC TGTTCGCAACTTACC  70 18
CXD87_RS11565 2387787 .. 2387802 + -11.8  -4.90266   TTCGCCTCATCGCAA              CCGGCC GGCA GGCCGG               TTTTTCATTGATGCC 100 53
CXD87_RS11570 2389790 .. 2389812 + -12.6  -3.61715   TCTCGATGGCTTCTT           CGCCGCGCGC CAG GCGCTCGGTG           TTCTTGACCCCGGTG  74 122
CXD87_RS11595 2395768 .. 2395822 +  -7.2  -3.39327   ATTGAGCGAATCGCC GCCGCGCGCGTAGTACATGTAGAC CACGCCCCC GTC--CATGAACAACGCGCGCCGC TTGTGGGTGTAGCCG  55 480
CXD87_RS11645 NONE
CXD87_RS11650 2405876 .. 2405886 +  -3.2  -2.63631   TCCCTTCGAGCAACC                 TGGG CTA TCCA                 TCATGTCGCAGTTGA  39 53
CXD87_RS11655 2407201 .. 2407211 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS11660 2408235 .. 2408270 + -14.7  -2.70932   TCTAGTGCATCTCAG   CGCGGCGG-GCAGGCGG CCCG CCGCG-GCGCCGCCGCG    TCGTTCCCGCCCACC  72 45
CXD87_RS11705 2416556 .. 2416577 + -14.4  -4.07885   CCGGCATTGCCGCCA           CGGGCCCG CGCAGA CGGGCCCG            TTTTGCAGGACCGTC  85 42
CXD87_RS11715 NONE
        acnD NONE
        prpF NONE
CXD87_RS11730 NONE
CXD87_RS11735 2424886 .. 2424899 +  -3.9  -3.53012   TCACGCTGGTTGTCG               TCAAA CCCT TTTGA                TTTCCGCGCCAGCGA  51 12
CXD87_RS11740 2426334 .. 2426345 +  -7.2  -3.28712   AAGCGCCGGCCCGCG                CGCC ACGC GGCG                 TTGTAAAAGCGCCGC  54 39
CXD87_RS11745 2426787 .. 2426805 +  -7.4  -5.75342   AAGCCCCTTTTAAGA             CCCGCT CTAAACC AGCGGG             TTTTTTTTGGCCGGG 100 96
CXD87_RS11755 2428330 .. 2428350 +  -8.3  -3.09492   AATAACCCTTATACG            TCCCCGT TAGGGAT ACGGGGA            TGTTGCAGTTCACGG  56 39
CXD87_RS11760 NONE
CXD87_RS11765 NONE
        hslO NONE
CXD87_RS11775 2432868 .. 2432884 +  -7.9  -2.84325   ACAGGCCGGACTTGT              CCACGCC GAA GGCCTGG              TCGTATTTGCCGGGC  52 449
CXD87_RS11795 2436358 .. 2436391 + -27.5  -3.16742   CGGAAGACAGCGGTT     TCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGA      TTACTGACCATTAAC 100 487
CXD87_RS11890 2456786 .. 2456832 + -16.5  -5.00884   CGGCATGTAAGCGCG GGCGCGCACGTGGGCGCC-GGCA GGA TACCAGGCGCCCTCGCG-GCGCC TTTTTTCCAGACCGT 100 31
CXD87_RS11895 NONE
CXD87_RS11900 NONE
CXD87_RS11905 2459514 .. 2459532 +  -8.8  -3.45849   GATGCCGTCCAGGCC             CGCGGC CAGCCGC GCCGCG             TTGTCGTGGTCTAGC  61 273
CXD87_RS11940 2468106 .. 2468123 + -14.1  -4.41494   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 61
CXD87_RS11950 2469775 .. 2469804 +  -8.5  -3.05596   GACAGTTCACAACTA       GCCGTTCA-GGCCG GCC CGGCCCTGCACCGC       TTCGCTGACCACCTG  55 25
CXD87_RS11970 NONE
CXD87_RS11980 NONE
CXD87_RS11985 2477802 .. 2477829 + -18.4  -2.71924   CATGACCTGAGCCGC        GCGGGCGAGGCC TGAC GGACTCGCCCGC         CTTTCCGGGAGGCTG  87 11
CXD87_RS11990 2478165 .. 2478184 +  -2.7  -3.63266   ATGCGCAACGTACGG            CCCGGCT GAACAG GGCCCGG             TTTCCGATGGATTTT  53 17
CXD87_RS11995 2479007 .. 2479025 + -14.6  -5.78622   CTGCGCAGCGAAAAA             GGCTTGCC AAC GGCAAGCC             TTTTTTTTCGCCTCC 100 50
CXD87_RS12000 2480116 .. 2480138 +  -5.5  -3.83026   AGGCGGCCAACCCAT          GACCCGCACC AGCC GG-GCGGATC           TTTCATGTGCCGCGG  60 24
CXD87_RS12005 2481229 .. 2481239 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 171
CXD87_RS12015 2483439 .. 2483486 +  -7.4  -3.64822   GGTTGGCGATGCCCA CGCCGTGGCCGGCCAGCGCCAG TTGG CAGACGGTGGACGAATACGGCG TTTCGATGGCGGCGT  60 228
         maf NONE
CXD87_RS12120 NONE
CXD87_RS12125 2502408 .. 2502453 + -13.1  -2.71712   TGACGGAGAAGCACC AGGCCG-CGCGCGACATGGTGC TGC GCGCCCTGCCGCGCGGCGGCGG CTTTCGCGAAGACGA  67 217
CXD87_RS12220 2522858 .. 2522914 + -11.5  -3.65812   AGGTCCGGCGCACGC GCCCGGCCTG-AG-GCGGCCGG-ACGCC GCGC GGCTTGCCGCCCGGGCTACTGGCCGGGC TTCTGTTCGGCAGCC  75 15
        mobA NONE
CXD87_RS12285 NONE
        mobB 2536491 .. 2536503 +  -3.3  -4.36914   GGCGGCGCATTGCCG                TCGGC CGC GCCCA                TTTTCTGCCACAGCG  67 162
CXD87_RS12320 NONE
CXD87_RS12325 NONE
CXD87_RS12330 NONE
CXD87_RS12335 2545729 .. 2545753 + -11.3  -3.57792   ACCACCCGCACGCCG          GCCTGCGCCAG CTC CAGCCGCAGGC          TTTCGCAATACGTCG  70 398
         tal 2552009 .. 2552019 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS12365 2553058 .. 2553068 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
        smpB 2561134 .. 2561147 +  -5.9  -2.71364   CGCGATTCCTGATGC               GGTCG CGGC CGGCC                TGCTTGGCCGCGTAC  47 29
CXD87_RS12430 2564561 .. 2564582 +  -8.6  -4.56597   GTTGACGTCGGCGTT           GCGCGCGG CGTTGA CCTCGCGC            TTTTTCAGCACGCCG  83 258
CXD87_RS12440 2565658 .. 2565678 +   -14  -4.77036   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 52
CXD87_RS12450 2569317 .. 2569327 +  -2.4  -3.16492   GCGGCAGCACTGCCT                 CCAG GTC CAGG                 TGTTCGTGGATATGC  43 291
         map 2586205 .. 2586222 +  -5.5  -2.87132   GGCCTTCGTGACACG             GCCGG TCGAAATC CCGGC              TCTCTGACCCCCGCC  46 1
CXD87_RS12540 2589251 .. 2589266 +  -7.5  -3.30124   GTTCACGCCCGAGAT              GGCGC AGGCGC GCGCC               TTCTACCCGCTCACC  56 420
CXD87_RS12550 2590130 .. 2590186 + -31.9  -2.71364   GGCGTTGCGGCGCAA CGCCTGA-CGGC-C-GCGCGGCCGGCTT GCGC AAGCCGGCCGCGCCGCGCCGGTCAGGCG TCGTTGGCCGCGTAG 100 19
CXD87_RS12575 2595157 .. 2595169 +  -3.3  -4.57569   CCTTTACCCGGCCAA                TAGGC GGC GCCAA                TTTTTGACAGAATCG  71 117
CXD87_RS12580 NONE
        fliS 2597004 .. 2597029 +  -3.1  -4.82901   CACCCTGCGCCTGCC         GTTCCGGCCTG AAAC CAGGAAGGCAC          TTTTTGTCCAGCCGC  75 14
CXD87_RS12590 NONE
CXD87_RS12595 NONE
CXD87_RS12600 NONE
CXD87_RS12605 NONE
CXD87_RS12610 2599664 .. 2599713 + -11.4  -3.53444   CGGCCCAGGCGCCAG TTCG-GCCTCGGTG-GCGCCGCCGC TTT GCG-CGGCGCGCACCACGGCGCGCA TTTGCGACAGCATGC  69 276
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 2605478 .. 2605529 +  -4.4  -3.30441   CGCCCTGACGCCTGC GCCGGG-TCC-GGCCGCGCAAGGCGGC CCG GCCGCC--GC-CGGCAAGGGTCCCAGC TTCTCGCAAGTGCTG  49 96
CXD87_RS12650 2607842 .. 2607859 + -10.5  -2.52464   TTTCGCCCTGTTTTT             CGCCTGC CAGC GCGGGCG              TGAATTGCGGCAGAA  56 308
        fliL NONE
        fliM NONE
        fliN 2610000 .. 2610014 +  -5.6  -3.14564   ACCGCTTGAACAGTC               GCCGCT AAA AGCCGC               TTCATGACCGAATCC  49 18
        fliO NONE
CXD87_RS12680 2611137 .. 2611149 +  -3.3  -2.58544   ACCTGCTGCTCGGCT                CGCTG GCC CAGAG                CTTCTACCAATAGCG  39 0
CXD87_RS12685 2611456 .. 2611471 +  -5.4  -2.78712   TGTCCTGAACGCGCC              TGGCCGC GCC GCG-CCA              TGATTGCGTTCACCA  45 33
        fliR 2612387 .. 2612405 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 153
        flgA 2630656 .. 2630671 +  -5.4  -2.79004   CCCCCATCGGGCCGG              TC-CCGC GCA GCGGAGA              ATATTTTGAAGATCC  45 131
        flgM NONE
CXD87_RS12780 2631533 .. 2631549 +  -9.3  -3.01712   CATCAAGGCCGCGGG              CGCCAGC CGC GCGGGCG              TCTTGCGCGCGCCCG  57 91
CXD87_RS12800 2638526 .. 2638580 +  -7.7  -5.35365   CTGGGGCGCTGGCAA GTAGAAGTCAGCGGGAGCCAGTCCCC GTTC GGGGACAGGCTCCCGG-GTATATTGC TTTTTCTTATGTTTT 100 102
CXD87_RS12805 NONE
CXD87_RS12810 NONE
CXD87_RS12815 2641033 .. 2641043 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS12820 2642171 .. 2642202 +  -5.7  -3.30214   CCGGGGCCTGGATGC      CGGCGCGGGCCGCC TGCCT GG-GGATGGCGCCG      TTGATGTAGTCGATT  52 149
        leuD NONE
CXD87_RS12850 2648870 .. 2648880 +  -8.2  -2.57132   AGCGCCACCAGCGCC                 GGCG CCG CGCC                 CTTGTAGGCCACCGC  51 446
CXD87_RS12880 2655853 .. 2655863 +  -2.4  -3.68351   GCCGATATTGAGGAT                 GGCC AGC GGCG                 TTTCGATCATGGCCC  53 513
CXD87_RS12895 NONE
CXD87_RS12900 2661592 .. 2661624 +  -5.4   -3.4072   GCCGCGTACTCGCCC     TGCAGCCGGGCGCCC AGGC GGGCGGTCAGC-GCG      TTGTCGTCGCGGATG  52 281
CXD87_RS12925 NONE
        clsB 2667898 .. 2667944 +  -9.8  -3.19602   ACACCGCCGGCGCCG CCTGGGCGCCTGGCTGGCCGGC ATC GTCGGCCTGGCCGTCGTCGGGG TATTGCTGTACCAGG  62 60
CXD87_RS12950 NONE
CXD87_RS12955 NONE
CXD87_RS12960 2672096 .. 2672118 +  -8.3  -2.87132   CGCCGCTCGTGAGCC           CCGCGGCGC CCGCC GCGCTGCGC           TATGTGGACGACAGC  54 29
        treS NONE
        glgB NONE
        glgX NONE
        treZ 2685483 .. 2685534 + -10.5  -3.04144   ACCGCCGACACCCTG GCGCGCTGGCGCGCCCGGCCTCC CGCCAT GCTGACCGCGCGCGCCGGCGGGA TGTTGCGCGTGCCCG  60 188
        treY 2689374 .. 2689413 + -15.6  -3.14132   AATGATGCGCAGGGC  CGGCCGCAGCGCCCGCGCG GCC TGCGCCAGCGC-GTGGCCG  TTCATGCCGGGCAGC  78 169
        ptsJ 2695380 .. 2695396 +  -4.3  -3.09908   ACATCAACCAGGCGA              CTTCCCA TAA TGGGGCG              GTTATTTTCCGAACG  47 55
CXD87_RS13025 2696056 .. 2696066 +  -5.4  -3.03798   CTGCCCATCGGCCGG                 GTGA GCC TCAC                 ATTCTTTCTCGCCCT  47 186
CXD87_RS13030 NONE
CXD87_RS13035 NONE
CXD87_RS13040 2698276 .. 2698297 +  -9.4  -3.01712   CCGCACCGCCGCCTG           GGCCGCGCC ATGGC GGC-CGGCC           TGTTCCACCGACAGG  57 396
CXD87_RS13055 2699898 .. 2699920 + -20.6  -5.41746   GCCGCGCCGCGATCG           CAGGGCCGCC TCG GGCGGCCCTG           TTTTTTTGGACGCTT 100 51
CXD87_RS13060 2700733 .. 2700755 + -10.5  -3.34398   GTGACCGCGCCCAAT           TCGACGGCG GCGCG CGCCGGCGA           TGTTTCCGCGCCGCG  63 273
CXD87_RS13065 NONE
CXD87_RS13070 2702238 .. 2702260 +  -3.3  -3.24747   GGCATCGGCCCGCCT           CGCCGGG CCCTGCCCA CCCGGAG           TTCATCATGTCACGC  46 89
CXD87_RS13075 2703184 .. 2703234 +  -5.6  -3.42996   ATGGTGGGCTCGATG CCCGCGTCGCGCAGCAT-TTGCAGCA CGT TGC-GCGACGTGCTGCA--ACGCGGG TTGTGGTAGATGGTG  52 403
CXD87_RS13100 2708071 .. 2708084 +  -2.3  -2.62184   TCCGGGCGCGCGTCC               GCTCG ACCT CAAGC                TGGTCTGACGCGCAC  38 4
CXD87_RS13105 NONE
CXD87_RS13110 NONE
CXD87_RS13115 NONE
CXD87_RS13120 2710232 .. 2710244 +  -2.6  -2.78384   GCGGTGGCCGTGGTC                GTGC AGAGG GCGC                TGTCATGAACCGCAC  38 5
CXD87_RS13125 2711001 .. 2711017 +  -4.4  -3.10641   AAAATTCTCCAGCCC             CGAGTGG ACCG CC-CTCG              TTCCCTGATGCCTTC  47 1
CXD87_RS13130 2711897 .. 2711935 + -10.4  -3.53012   GCGCCGGCGGCGGGC  GCCGCCGAACAACGCGGC GCAAG GCC-CGTTGTTCG-CGCC  TTTGCCGCGCGCCGG  67 41
CXD87_RS13135 2712534 .. 2712546 +  -4.7  -3.02739   TGTCGCCACGGACGC                CGCGC GCG GCCCG                TCTGTATCCGTTCCC  45 82
         psd 2713528 .. 2713584 +  -2.2  -2.74192   TTCGCTTTATCGATA CATGAGGGCTTGCTAGATTGCGGC CTGGCCATC GCCGCCGTTTCTGGAGCTCTCATG TCGTCTTCCGCACTG  38 56
CXD87_RS13145 2715162 .. 2715194 +  -5.6  -4.31837   CGGGTCGTTGGGCAC     GGCGATG--GTCGCGC CCT GCGGGATGGCATCGCC     TTTCTTCAGTTTCTT  69 461
CXD87_RS13165 2717402 .. 2717459 + -12.5   -3.3514   GCCATGCCCGTCGTG CTGGCGCTGACCGCGT-CGCTGGGCGGG CAG CGCGCCCTGCGCACGCAGTATCCGCTAG TTGTGAACTGTCAAT  73 193
CXD87_RS13185 2720748 .. 2720781 +  -4.5  -3.84451   TTGCCGCAGCGGCCA     TGGACGAGTTGCTCGG AGC CC-AGTGTCTCGACCA     TTTCGATTTCGGCGG  60 296
CXD87_RS13210 2725992 .. 2726012 +  -5.3  -2.53263   CGCCGGTCGCGCGAG            CTGGCCGAG GAG TTCGGCCGA            TGAGTTCGGCGTCGC  44 2
CXD87_RS13215 2726671 .. 2726681 +  -3.2  -3.53811   CAATTCACGGCGTCA                 TGTG TCA CGCA                 TTTCGACGGGGTCCC  49 103
CXD87_RS13220 NONE
CXD87_RS13225 NONE
CXD87_RS13230 2729075 .. 2729111 +   -13  -2.71791   TCAACGTACGCCCAG    GTTTCCGGCTCCGG GTCGCACTA CCGGAGCCGGAGCC    ATTTGGAGCACGAGT  67 72
        livH NONE
        livM NONE
CXD87_RS13245 NONE
CXD87_RS13250 2733003 .. 2733013 +  -8.2  -3.60098   AGCACCACGGCATCG                 GCGC CGC GCGC                 TTTCAGGTGGGCGAT  63 267
CXD87_RS13265 2735130 .. 2735168 +  -4.4  -3.53012   CGGCGCTGCACACCA   GTTGGCCTGCCACGATGT AGA ACATCGTGGTCAGCATGC   TTTCGCCGCGGCCGA  52 338
CXD87_RS13275 NONE
        trxA 2743312 .. 2743353 +  -2.1  -4.06864   CCGCGCATTCCCCCC TGATTCCCGC-GCGGGCC CGTCCGT GGCCCGCCGCCCGAACCC TTCTTCTTATCTCCC  58 66
         rho 2744669 .. 2744686 + -14.1  -4.54727   CACGCCCGTCCCGAC             CCCCGGC CCGC GCCGGGG              TTTTGCTTTGCGGGC 100 54
CXD87_RS13315 2751252 .. 2751264 +  -4.7  -4.09243   TAACGGTTTTTCCCC                GCTGC AAA GCCGC                TTTTCACGCCATGTC  62 38
CXD87_RS13320 2752100 .. 2752112 +  -6.2  -4.11501   ATATTCACCGCCAAC                CCGC CGCGC GCGG                TTTCCTTGTATTTGG  69 191
CXD87_RS13330 2755448 .. 2755487 + -11.5  -3.05384   GATACACCACGATGC GCGATGCCTG-GGC-GGGCG CGC CGCCCTGCTGCAGGCG-CGC TTCCATGGCCCGCAC  62 181
CXD87_RS13350 2760620 .. 2760653 +  -5.2  -3.14963   CACGGCGCCGGCCAG     GCCCTAGACTGCCA CGCAAT TCGCAGTCCAGCGC      TTCACTCGTTATGCC  49 133
CXD87_RS13355 NONE
CXD87_RS13360 2761857 .. 2761867 +  -4.6  -4.07568   GAGGCGGCCGGCACG                 TGCG TTA CGCG                 TTTTCGCGCGAAGCG  62 92
CXD87_RS13405 2773452 .. 2773475 + -11.7   -4.8622   CAAATCGTTGATCAA          GGCCTGGCA CATCGC TGCCGGGCC           TTTTTCATTGGCGCG 100 39
CXD87_RS13415 2776108 .. 2776124 +  -5.7  -2.64472   TGATGCGCAGGATGC              CGCGGTC ATA GGCCGCC              TGGATTTCCGACATC  45 268
CXD87_RS13425 2777725 .. 2777735 +  -5.4  -5.69473   TGCACGTCCCCCATT                 TCTC ATC GAGA                 TTTTTTTCTGATATC 100 300
CXD87_RS13435 2777899 .. 2777920 + -17.3   -4.8622   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 34
CXD87_RS13455 2780852 .. 2780866 +  -4.2  -2.73124   CCGGGCAGTTCGTTA               GACTAG GAG CCAGTC               ATTTCAACCCTAAAC  41 71
        kynB NONE
        kynA 2782531 .. 2782567 +  -3.5  -3.40403   CGTGCGCCGGGCTGC    TTGCCCGGCCTGGCTGG CGA CCCGCTAACCTGGGAAA    TTATCATGAAAGAAG  49 152
CXD87_RS13470 2782872 .. 2782887 + -10.4  -5.86061   GAGGCGCACCAGAAA              GCAGCC TGCG GGCTGC               TTTTTTTTCCTCGCG 100 58
CXD87_RS13475 NONE
CXD87_RS13480 2786216 .. 2786233 +  -6.9   -3.9777   GTGGGCACCGTGATG             CGCGCCG CTCT TGGCGTG              TTTCTCGCTCTTGGC  66 147
CXD87_RS13500 2790533 .. 2790549 +  -9.3  -2.73364   TGGCCGCCAGCCTGG              GCACGCC GGC GGCGCGC              TGATTACGGTGACGG  55 6
CXD87_RS13505 2791374 .. 2791408 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS13515 2793218 .. 2793250 +   -17  -3.01791   ACTCGGCCAGTTCCA     GCGCCCAGGTGCGGG TGCA CCCG-ACCAGGGCGC      TCTTGGCGGCCGAAT  82 290
        hpnC NONE
        hpnD NONE
CXD87_RS13540 2798539 .. 2798551 +  -4.7  -2.93073   GAAGACTCCTCAGGC                CGGCG TCG CGACG                TGGTTCTTGAGCCGG  44 450
CXD87_RS13565 2801665 .. 2801675 +  -3.2  -3.45366   TCATCCCGGTCGTGC                 TGGC ACT GCTA                 TTCATTCATTGACCG  48 3
CXD87_RS13570 NONE
CXD87_RS13575 NONE
CXD87_RS13580 NONE
CXD87_RS13585 2805614 .. 2805642 +  -6.6  -3.28712   CCGTGGCCGGATCGC       GCACGGCCTGGGC GAAC GCCTGGGCCA-GC        TTGTCGCGCACCGCG  52 184
CXD87_RS13600 2809461 .. 2809473 +  -4.7  -2.72344   ATGGACAATCTCCCC                GGCCG CAG CCGCC                TGCTTGCACATCCCG  43 499
CXD87_RS13620 2812642 .. 2812666 + -13.6  -3.30771   CCCTACGGCCAGTTC         GGTGCGGC-CG CCAT CGAGCCGCACC          TTGTGCCGGATGTCG  74 251
CXD87_RS13650 NONE
CXD87_RS13655 2823187 .. 2823218 +  -2.7  -3.14931   CGAACCGCCAGCCCT      GCGGGCGGACCTC TACCTC GTGGCCCGCCGGA       TTCATGCGGGCTGCC  43 364
CXD87_RS13690 2826642 .. 2826665 +   -16  -3.21416   TGCCGCCTCGGGATG          GCGC-GCGCGC CAG GCGCGCAGCGC          TTCCTGGTAGCGCTC  80 66
CXD87_RS13710 NONE
CXD87_RS13715 2830251 .. 2830278 +   -14  -4.56597   CTGAGCGCAACCCGA        TCGGCGGCGGGC CCGC GCCCGCCGCGGC         TTTTTCGACAACCAA 100 37
CXD87_RS13720 2831162 .. 2831201 + -11.5   -2.9162   CCTTGGCGCGCCATC CTGCCGCGGCGTGCGCC CCCACCAA GGCGC-CGCCGTG-CAG  TCGTTTCCGGAGTTC  63 69
CXD87_RS13725 NONE
CXD87_RS13730 NONE
CXD87_RS13735 2833390 .. 2833422 +  -5.3   -2.9296   CCGCGGCGCCATGAA      CCGGCGCATGGCGGC GGC GCCGTGGGGCGATGG      TATGGTTGGGCTTTC  46 65
CXD87_RS13740 2834673 .. 2834720 + -14.1  -3.61517   GCACCGCGGCCGCCT TGCGC-GGCC-ATGGCGCGCGCG CCCG CGCGTGCGCCGGCGGCCCGTGCG TTATTCGACACAGGT  78 300
CXD87_RS13745 2835635 .. 2835649 +    -7  -2.85668   GGATGCCTTGGCAAC               GAGCCG GCG CGGCGC               TATGGTATGCGGATA  50 53
        bamD 2847920 .. 2847948 + -21.1  -4.08064   ACTCGCGCAGTCCAA        GGAAAGCCCGGCC CCA GGCCGGGTTTTCC        TTTTGCGCGGCCGTT 100 45
CXD87_RS13820 2852584 .. 2852620 + -27.4  -2.71364   AAGCGCTGATCGCAA   CGCAGGCGCCGC-CCCG TCAT CGGGTGCGGCGCCTGCG    TCGTTGCCCCGATCC 100 32
CXD87_RS13845 NONE
CXD87_RS13850 2857318 .. 2857328 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 91
CXD87_RS13855 2858818 .. 2858836 +  -8.9  -3.28924   GGTATCGATCTGGCC             GGAAAGC AGCGC GCTTTCC             TTGTCGGCCACCGTG  59 511
CXD87_RS13865 2860428 .. 2860445 +  -2.5  -3.58343   ACACGACCGAGCCGG             CCAGCGC CTGG GCGCGGA              TTTCGCGATGCTCGA  50 376
        mdeB 2872789 .. 2872826 + -20.6  -3.06796   CCTGGCAGTCGTGAC   GGCCGCATCGGCCGGG ACGTGG CCCGGCCGATGCCGTC    TTCGCTGCGGTGCAG 100 27
CXD87_RS13905 2875373 .. 2875390 +    -4  -3.04144   GGCTCCATAACTCTT             CTGGCG CCAAGA CGCCCG              TGTTACCCATGCAAA  44 174
CXD87_RS13910 2876057 .. 2876067 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS13920 2877409 .. 2877439 +  -6.8  -3.65046   GCGCTTGGTCAGGAA      GCGCATGCGCCGG TCGATT TC-GCGCAGGCGC       TTCTTGCCGTACAGG  57 363
CXD87_RS13980 NONE
        recJ 2896992 .. 2897003 +  -7.2  -3.65812   GAGCACGCCGCCTGA                GGGC CGCC GCCC                 TTCTGTTACAAACCG  61 26
CXD87_RS13990 NONE
CXD87_RS13995 NONE
        lysS NONE
CXD87_RS14005 NONE
CXD87_RS14050 2912295 .. 2912313 +    -8  -3.53012   GCCAGCATCTGCCGC             GTGACGGC ATC GCCGCCGC             TTTGCAGCAAGGAGG  58 170
CXD87_RS14070 2916198 .. 2916218 +  -2.5  -3.31144   GCCCCGGGAGGAACA            TCATGTTGA AAG TCAGCGAGA            TTCTGCGCGTCAAGG  44 60
CXD87_RS14075 2916707 .. 2916717 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 74
CXD87_RS14080 2917915 .. 2917940 + -16.9  -3.12595   TCACGCGCAGCGGCA         CGCCGCG-CGCA ATC TGCGTCGCGGCG         TATTGCATCATTGCA  80 219
CXD87_RS14090 NONE
CXD87_RS14095 2921050 .. 2921060 +  -4.6  -3.30124   GCCAGGCGTTCGGCC                 CGCT GAT GGCG                 TTCTGCGCGATAGCG  49 374
CXD87_RS14120 2923887 .. 2923902 +  -4.6  -2.57132   CAACTTGTAACGGTT              GGCTGG CCAT CCACCC               CTTATCCAGCGGCGC  42 53
CXD87_RS14125 2925980 .. 2925996 +  -2.2   -2.8372   TACGGCGGCCGCGGT              CTGAGC CTGCT GCTAAG              GTTTCATGGCAAATA  40 22
        folP NONE
CXD87_RS14135 2928222 .. 2928241 + -16.4  -5.06414   CCGGACCTGCCCGAA            GGCCCGCC TGAT GGCGGGCC             TTTTTGTTGCGCGGG 100 48
CXD87_RS14140 2929343 .. 2929370 + -21.4  -3.48276   CCGACGGGGTGCTGG        GGTGCCTGTCCC CGCG GGGACAGGCACC         TTGTATCGGGGCAGG 100 154
        ppk1 2933273 .. 2933292 +   -15  -5.09259   CGGCCCGCTGCCGCC            TGGCCGCC CGCG GGCGGCCA             TTTTATTTTGAAATA 100 43
        pstS 2934533 .. 2934554 + -10.1  -2.52464   CCTGGCCGGACCAGT           GAACGGCGA GCGA TCGCCGTCC            TGACTTCGCGGGGCG  56 68
        pstC NONE
        pstA NONE
        pstB 2937325 .. 2937359 +  -7.7  -3.49858   CGGAAGACTACATCA    CCGGCCGCTTCGGCTG AGGC CGGCCGGCG-GGCCGA     TTCTGGTATAGTTGC  60 9
CXD87_RS14175 2937552 .. 2937592 + -11.2  -3.86346   TAGCCGCTCCATGCA TGTCAAAGCCCCGATACGG ATTT CCG-GTCGGGGCTTTCGCG  TTTCTGCGGGCGTGC  77 119
CXD87_RS14180 2938738 .. 2938776 +  -3.8  -3.32844   TCGGGGTCGGGGTGC  CGCCCGGCGTGCTCG ATGACATAGG CGAACAC-CCGGCCG   TTCTCGCGTGCGAAC  47 104
CXD87_RS14205 2945142 .. 2945152 +  -8.2  -3.53091   CATCAGCCCTTGCGC                 GCCC ACC GGGC                 TTTCGGCAAACGGGT  61 336
CXD87_RS14220 NONE
        cobA 2951180 .. 2951220 + -14.7  -3.32498   TGCCCAGGCCCAGTT CGGCG-CGCGTGCCGCGC AGTTCG GTGCGGTGCGCGATGCCG  TTGGTGTGTACCGTA  79 220
        queA NONE
CXD87_RS14275 2960031 .. 2960057 + -12.3  -2.70932   GCGCGGGGTCGACTA        GGGCCG-GCC-CC CCC GGCGGCGCGGCCC        TCGTTGCGCCGCGCC  65 25
        yajC 2960531 .. 2960549 + -17.4  -3.65046   TGTAAGGTCACACAA             GGCCCCGC GTG GCGGGGCC             TTGTTCCGCTCACCC  91 36
        secD 2962496 .. 2962521 +  -2.5     -3.37   CCCTGCCGCCCGCCG         TCC-TGATACGC AAG GCGAAACATGGA         ATTTTTCCGGATTCA  46 54
        secF 2963475 .. 2963504 + -22.2  -5.81412   CCCGGTAGTAAAAAA       CCCTGCCCGGCC AAATGC GGCCGGGCAGGG        TTTTTTTTACATGCA 100 48
CXD87_RS14295 2965179 .. 2965202 +    -8  -3.61398   CGTCGTCAAGCAGCA          CTTCGGGGCG CGCG CGCCACGACG           TTCTTGAGCACCCAG  60 403
        miaB NONE
CXD87_RS14310 NONE
        ybeY 2968666 .. 2968701 +  -5.3  -3.31905   GCGCCGCGCAGATTG    GC-GCCAATGCGCCCC AAATC GGGGAACAATGGCCGC    TGTTGTATGCAAAAT  51 43
CXD87_RS14320 NONE
CXD87_RS14325 2971731 .. 2971770 +    -5  -3.53444   TAGACGATGACGCCG GTGTCGTGG-CTTGC-GC ACCAGG GCAGCAGGTCCGCGGCGC  TTTCGCGGCGGATGG  52 440
CXD87_RS14335 NONE
CXD87_RS14340 2972832 .. 2972845 +  -8.1  -2.80398   GGTGTAGAAGTTACG               CCGCT GCGG AGCGG                TAGTTCAGTTGGTTA  51 54
CXD87_RS14345 2972930 .. 2972951 + -14.5   -5.7946   AAAAAATTCCGAAAA           GCCAGTTGC GTAA GCAACTGGC            TTTTTTTCTTCCCGG 100 40
CXD87_RS14350 2974377 .. 2974396 +  -4.8  -3.28712   GCGAATTGGCTTCGT            CGCGGCGC TCCT GCGGCACG             TTGTCCAGCAGCACC  49 235
CXD87_RS14415 2986555 .. 2986589 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 493
CXD87_RS14425 2987828 .. 2987840 +  -4.7  -2.90496   GCCCAGCCGTCCGCC                GCAGC ACC GCCGC                TGATTTCCCGCGGGC  44 10
CXD87_RS14430 2988243 .. 2988270 + -11.2  -2.75074   GCCCCGATGAAGATG        GCCGGATCGACG CGCG CGTCGTTCAGGC         TGATGTTCCAGTGCA  59 70
CXD87_RS14470 NONE
CXD87_RS14475 2995483 .. 2995493 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 238
CXD87_RS14480 2996699 .. 2996716 +    -4  -3.60805   CCGCGCGCCACGCCG             GCGGGC AGGACG GCCCGG              TTTGCGCTACGCTGT  51 44
CXD87_RS14485 2997448 .. 2997469 +  -8.1  -3.64599   GGCGCCCCGGTCACA           CGAATGTTGC ACC GCAACA-TCG           TTTGCGGTGTAATAG  63 48
CXD87_RS14490 NONE
CXD87_RS14495 NONE
CXD87_RS14500 NONE
        fabI 3003294 .. 3003305 +  -7.2  -3.33483   GGAATCGGCACCTCG                GCGC CGCG GCGC                 TTCATGATTTCGATC  55 470
CXD87_RS14525 3008224 .. 3008234 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS14530 3009245 .. 3009258 +  -3.1   -4.2074   CACAACTAGCTGCCC               GGTTT GAAG AAGCC                TTTCTCTCTTGGGAG  63 32
CXD87_RS14535 3010510 .. 3010536 +   -13  -4.65895   CCATGGCAGTACGTA        CGCCCGGCCGC CTCACC GCG-CCGGGCG         TTTTTGCGTCCGGCG 100 79
CXD87_RS14555 NONE
CXD87_RS14560 NONE
        folD NONE
CXD87_RS14570 3022573 .. 3022608 +   -19  -2.59431   TGCAAGCCTGACCTC    TCAGGTGCCTGTCCCC GCAG GGGGACTGGCACCTGC     TGACTTCTGGACGCC  87 30
CXD87_RS14575 3023376 .. 3023393 + -14.1    -3.965   ACCCAATGATCCGGA             CCGCGCC CCAG GGCGCGG              TTGTTGCTTTTGCGC  84 32
CXD87_RS14580 3023785 .. 3023815 + -25.6  -4.07568   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 44
CXD87_RS14600 3030276 .. 3030305 +  -4.3   -4.1822   CACCACCCGCAGCCC       CACCAG-TTCGC ACATGCG GCGAATCTGGCG       TTTCTTGCCCTCGCG  63 182
CXD87_RS14610 3031518 .. 3031546 + -10.2  -4.07885   CGCTGGCGCGCGCGC       CCGTCGCGCCGCG CTGA CGCCGC-CGGCGG        TTTTGACGCAGAATC  78 9
CXD87_RS14620 3034268 .. 3034284 +  -2.2  -4.42238   CGTCCGACAGGGTGA              CCTCGA CGCTC TCGATG              TTTTCCTTCAACTGC  68 234
CXD87_RS14630 3036711 .. 3036722 +  -7.2  -3.78953   CTTCCACTTGCTGCA                CCGG CAGG CCGG                 TTTCCTCCTGGGCCT  64 435
CXD87_RS14645 3039304 .. 3039324 +  -8.1  -3.01712   CCTGGTGTTGAAGCC            GGCGGGCCC CGA GGCCCCGGC            TCTTCGCGGACCACG  53 438
        mltB 3054946 .. 3054958 +  -4.7  -3.57144   AGATCTTCGGCATGT                AGGCC TCG GGCCA                TTTGCGGATGCCCGG  54 322
CXD87_RS14800 3072195 .. 3072215 + -18.3   -5.4505   GCCGCTACAATGAGG            GGGCCTCGC ATA GCGAGGCCC            TTTTTTCTTGCCGCG 100 52
        ubiG NONE
CXD87_RS14810 3073727 .. 3073749 +  -2.7  -2.77899   GCGGGCCCCATGCCC          GT-GCCGG CGCCACAC CCGGCCAC           TGATTGCTCCACCCA  40 59
CXD87_RS14815 NONE
        ssrA 3075551 .. 3075573 + -13.6  -5.85178   CAAGTATTTACCTAA           TAGCCAACTT CAA AAGTTGGCTA           TTTTTTTTGGCTGTT 100 57
CXD87_RS14825 3075818 .. 3075846 +  -6.9  -3.02471   GCGGGGCAAAATAGT        TTGTTAATGTGTA CTA TACACATTAAAAG        TGTGTATAGTACACA  51 19
CXD87_RS14830 3076049 .. 3076075 +  -7.9  -2.84298   GGTTTGAAGTGAGAC         ACAAGCCCCGA AGCAA TCGGGGCCTGC         TAGTTGTGAACTGTC  52 29
CXD87_RS14840 3077577 .. 3077614 + -11.3   -3.6682   TCCGACGCACCCAGC   AGAGAGCCCCGA-CTGGA CAA TCCGTATCGGGGCTCTCG   TTTGCGTGGGTAGCA  73 55
CXD87_RS14850 3080000 .. 3080034 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS14865 3082559 .. 3082592 + -13.1   -3.0497   GACGGCACTCCGTAC     ACGAC-CGCTTCGCGC ATG GCGCGCAGCGCGTCGG     TATTCCAGATACTCT  70 111
CXD87_RS14875 3085096 .. 3085106 +  -2.4  -3.02381   CGGAAACCAATTCCC                 CCAG ATG CCGG                 TCTATGGTGTTCTGC  41 119
CXD87_RS14880 NONE
CXD87_RS14890 NONE
CXD87_RS14895 3090117 .. 3090148 +  -5.6  -3.14132   TCAGGCGCAGGGCCA      GCGCCGCCACCGCG TCCT CCAGGTGGCGCGGC       TTGCTCGCCCCCACG  47 102
CXD87_RS14910 3093866 .. 3093885 +  -2.8  -3.53761   TTGACAAGCGCCCCC            GCGACGC CCAAGAT GCG-CGC            TTTCGCCGCCCCTTG  49 37
CXD87_RS14915 3094458 .. 3094492 +  -7.8  -2.58999   GCGTAAGTCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS15015 3114972 .. 3114983 +  -5.8  -3.53811   TATCGCGCCGCTGCA                CCCT GGTC AGGG                 TTTCGGGCAGATCGA  57 414
CXD87_RS15025 3116471 .. 3116518 +  -4.1  -2.71712   GATCGCCTCCTTGGG CGCTGCGC-GGCCG-ATGCGC-CG GCG CGCGCCCGTACGTCCAGTGTAGCG ATTTCGGCGCCGCGC  41 220
CXD87_RS15045 3119860 .. 3119894 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS15060 3123498 .. 3123513 +  -3.2  -2.87132   GGCTGACCGAGATGC              TGCTCG GTTC CGAGGA               TCTGTAAGGAGGCCA  41 3
        ilvN 3124021 .. 3124048 +  -8.2  -2.55074   GGATACTGAAAATCT        GACCGGCGCGCC TGGC GGCGCGCCACCC         TGCATTAGCATTCAC  52 24
        ilvC 3125161 .. 3125178 + -14.1  -5.79595   GCAGGCTGGTCCAGA             CGCGCCC CACG GGGCGCG              TTTTTTCTTTTCCGC 100 75
        pssA 3126232 .. 3126245 +  -8.1  -3.27022   CCTGGCGCACGCTGG               GCAGG CCGA CCTGC                TTGATCTCGGCTGGC  56 199
CXD87_RS15085 3126812 .. 3126835 +  -4.5  -3.63367   GGCAACAGCGTAACA          GGGCGCCCGG TTGTC TCGGG-GCTC          GTTTTTCTTGAAACC  55 28
CXD87_RS15090 3127196 .. 3127231 + -16.8  -5.04601   CTCCCCATGACGCAA    CCGTGGTCGGGGCGAC GCAT GTCGCAACGGCCACGG     TTTTTCATTTGTAAG 100 54
         pnp 3129442 .. 3129459 + -14.1  -4.66163   TTCCTGACGCAAGAA             CGGCGCC CGCG GGCGCCG              TTTTTGCGTCCGCAT 100 50
CXD87_RS15100 3130423 .. 3130457 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS15110 3132873 .. 3132896 +  -3.7  -3.73775   TCACATGGAAATCCT          TGGGGTCGC TGTAGC GCAGCCCCG           TTTCGTAAGGCTGCG  55 336
CXD87_RS15125 3134791 .. 3134823 +   -14  -4.66318   TAGCGCCAGCCGGAC      GGCGGGCGCGCCGG ATCGC CCGGTGCGCCCGGA      TTTTCTTGCCCTGGT 100 38
CXD87_RS15130 3135671 .. 3135683 +  -5.5  -3.02074   CGCCGCAGCTTAAGT                TTCCG TTC CGGAG                TCTGTAATGTCTTTG  47 28
        secG 3136146 .. 3136175 +    -3  -4.09685   TGCTAGAATGCCCGA      CTTT--CCAGGATC TTCG GATCCTGGTCGAAG       TTTTGCAGGATGCCG  59 35
CXD87_RS15140 3136332 .. 3136357 + -13.3  -4.91109   AAAGCCAGCAAAAAA         GCCCATATGCG TCAG CGCCTATGGGC          TTTTTGTCGTCCAGG 100 86
CXD87_RS15145 3139253 .. 3139278 +  -2.4  -3.58343   CAGGGCCCCGGCCTC         CCGGACCAGC AGTTGC GCCAGTTCGG          TTTCCCGATGCTCCG  50 123
CXD87_RS15155 3141478 .. 3141516 + -12.4  -3.87994   TCCTATCGGACGCGC  CTGTCCGCGGCGTAGCG TCCGTC CGC-ACGGCGCGGGCGG   TTTGTCGGCATCACT  81 11
CXD87_RS15160 NONE
CXD87_RS15165 3144480 .. 3144490 +  -2.4  -3.35679   GTCGGTGCTGGCCCT                 GCGC GAA GCGA                 TTCTCGATCGGGCCG  46 494
CXD87_RS15175 3146659 .. 3146687 +  -2.9  -3.86015   CCACCGCACGCCGAT        GACCGCGAGTTGG TGC CCAAAGCGAGGAC        TTTGTGGGACAGATA  56 91
CXD87_RS15180 3148155 .. 3148169 +  -5.6  -3.53091   GCTGCTGTTCCTCGC               GCAGCG CTT CGATGC               TTTGGCCGCACGCCT  52 374
        metC NONE
CXD87_RS15200 3152226 .. 3152284 + -18.7  -4.56597   TTCCGATTCGAGCAG GTCCG-GCGCCGCGGGCG-GCGCCGGTGG TTG CGTTCGGCCCGCGCCCGCGGCGCGTGGCC TTTTTCAACGAAGAA 100 66
CXD87_RS15205 NONE
CXD87_RS15210 3155370 .. 3155382 +  -3.3  -3.63627   CAAGGTCCGGTCCGA                CCCCA CCG TGGCG                TTTCGCATCTGAACG  53 1
CXD87_RS15235 3162768 .. 3162792 +  -5.6  -4.00042   TTGCAGCATGGGTTG         CGCGGCATGGC GCGG GCCG-GCCGCA          TTGTTTGATGGCGCG  63 63
         azu 3163482 .. 3163503 + -11.5  -2.62184   ATGTGCTCGGCCCGC           TCGACCCGC GCCT GCGGGCCGA            TGATCTCGCGAAACA  59 142
CXD87_RS15270 NONE
CXD87_RS15275 NONE
CXD87_RS15280 NONE
CXD87_RS15285 3174584 .. 3174597 +  -3.7  -4.35461   ACGCGGCGGCCTGAG               CGGGC GCGA GCCCC                TTTTCATCGTCTTGA  68 59
CXD87_RS15290 3175503 .. 3175525 +  -3.3  -3.38046   TGGCCAGCGGCTGGA           GGCGGCATG ATGCG CGTGCTGCA           TATTTCGGATACCCA  48 16
CXD87_RS15295 3176333 .. 3176347 +  -9.2  -3.14795   CGGATGACGCGCGCC               GCGGCG CGA TGCCGC               TGTTCGTGAACCTTT  59 34
CXD87_RS15300 3177326 .. 3177341 +    -6  -2.66326   CTTGCCGTCGCTGAA              CCGCTC CAGG GTGCGG               TCGATTTCCCGTTCA  45 207
CXD87_RS15330 3181048 .. 3181083 + -26.4  -4.24326   GGGCCTCGTGCCCGC    GCGAAAAAAGCCGCCC TTCG GGGCGGCTTTTTTCGC     TTTTGAATCATGTTT 100 86
CXD87_RS15335 NONE
CXD87_RS15340 3182054 .. 3182070 +    -5  -3.05384   TGCGCGCTGAACCAC              CGGCGC GGGCG GCGCGG              TTCGATCGCGCCGCC  45 31
CXD87_RS15345 NONE
CXD87_RS15350 NONE
        nuoE NONE
        nuoF NONE
CXD87_RS15365 NONE
        nuoH NONE
        nuoI NONE
CXD87_RS15380 NONE
        nuoK NONE
CXD87_RS15390 NONE
CXD87_RS15395 NONE
        nuoN NONE
CXD87_RS15405 3196200 .. 3196216 + -13.7  -5.78622   GCCGCTTCAGCGATA              CCGCCTC CAT GAGGCGG              TTTTTTTTCGCCTAC 100 50
CXD87_RS15410 3198734 .. 3198754 + -11.8  -4.98531   ACCCCGCCGTTCCGA            CGGCCTCC CGCAA GGGGGCCG            TTTTTCATTTCCGGC 100 52
CXD87_RS15415 3201213 .. 3201229 + -15.1  -6.09133   GCGCAGCAGGGAAAA              CCGGCGC ATT GCGCCGG              TTTTTTTTTGGCATG 100 49
CXD87_RS15420 3202061 .. 3202090 + -10.6  -2.65808   GAATTCGGCCACTTC       GCCGGCGGCCTG CCGGGT CAGGCCGACGAC        TGCGTTCTTGGCGGT  55 266
CXD87_RS15440 3206577 .. 3206606 + -23.7  -3.03006   CCGTCAAGTGTTCAT       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TATGTGTGGCTTACT 100 114
CXD87_RS15455 NONE
CXD87_RS15460 3212201 .. 3212211 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS15470 3213229 .. 3213260 +  -8.7  -3.61398   AGCTGGCGTGCGCTT      CGGCGTGGTAGCGC CCCAC GCGCT-CCACCTCG      TTCTTCGAACCCAGG  62 39
CXD87_RS15485 3217788 .. 3217798 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS15490 3218837 .. 3218858 + -10.1  -3.01712   CTCTACAATCGGCAG           CGCCCGG ACGTCGAG CCGGGCG            TATTGCCGGCCGCGC  60 60
CXD87_RS15495 3219980 .. 3219999 +  -4.4  -3.45571   GCCGATATCCATTGA            TGTATATA GTCA TGTATACA             TTGATATTTCCCCAC  51 162
CXD87_RS15500 NONE
CXD87_RS15505 NONE
CXD87_RS15510 NONE
CXD87_RS15515 NONE
CXD87_RS15520 NONE
CXD87_RS15525 NONE
CXD87_RS15530 NONE
CXD87_RS15535 3229251 .. 3229291 +  -3.6  -3.65046   TCGAGCGGCGGGCCG  CGCGGCGCCCGCCGCCGG CCCGT CCGGCGCCCGGCCAGGAG  TTATTACAATGACAA  54 44
CXD87_RS15540 3230160 .. 3230173 +  -5.9  -2.78935   CGAACCCGTGTGCTC               GCGGT TGCC GCCGC                TATACTGGCCGATAT  46 86
CXD87_RS15555 NONE
CXD87_RS15560 3234760 .. 3234771 +  -5.8  -3.01712   ACGGCGGCTTCTACA                TGCC CTGA GGCA                 TGTTCAAGCCAACAC  47 18
CXD87_RS15565 NONE
CXD87_RS15570 3236920 .. 3236931 +  -5.8  -3.93695   TTGCGCCAGCGGATT                GACC CGCA GGTC                 TTTCTCGCTGGTGAA  63 522
CXD87_RS15630 3252756 .. 3252775 +  -4.3  -2.71144   TTGATCTGCATGTAC            TCG-GCCA GGCCA TGGCGCGA            TCCTTCGCGGCCGTA  40 84
CXD87_RS15665 3262835 .. 3262860 +  -8.9  -3.70902   CGCGAACGCAAAAAA         GCCGACACCAC GTTT GCGGTATCGGC          TTTCGCTATGCGCCC  65 63
        rplU NONE
CXD87_RS15690 3266352 .. 3266373 + -17.3  -5.45802   TCCCCGGAACGGCGA           GCCCTGCCG CACG CGGCAGGGC            TTTTTGTTTTCAGGC 100 53
        obgE NONE
CXD87_RS15700 3268851 .. 3268873 +  -4.1  -3.13073   ACCAACCAACATGCC           GGACAAGCC CCTCC GATTTGTCC           TGTATTCCTGACCGT  45 62
CXD87_RS15710 3270565 .. 3270599 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 310
CXD87_RS15725 3271907 .. 3271930 + -10.2  -4.41348   TGGAATAATGCCCCT          GCCGCGC-CCC ACC GGGCGCGCGCC          TTTATTTCAGCGAGA  88 56
CXD87_RS15730 3274302 .. 3274312 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 183
CXD87_RS15735 3275295 .. 3275334 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD87_RS15740 3276383 .. 3276427 + -10.6   -2.8294   ATCGGCGCCGTGTTC CCACGCGCGCAGCGGGAGCGGC AGT GCCG-TAGCGC-GCGCGTGAGG TGCTTGTGCACCATA  57 43
CXD87_RS15750 3278062 .. 3278092 +  -6.2  -4.27584   GGCCGTTCCGTCTTA       GAGATTGGTAGTGG TAA TTACTTTCAATCTC       TTTTCGGTTAAACAT  70 135
CXD87_RS15755 3280708 .. 3280721 +  -3.7  -3.36803   CGTTCCGGCGCGCCT               GCAGG ACCA CCGGC                TTGTCGATGCCCTTG  47 217
CXD87_RS15780 NONE
CXD87_RS15785 3287305 .. 3287328 +    -3  -4.17556   GATGGTGACGGCGTA          GCCGGACACG CGCG CCTGTTCGAC           TTTCTTGCGGATCTC  61 285
CXD87_RS15795 3289790 .. 3289800 +  -6.8  -3.09516   ATCCACAAGGGGCGG                 CCGA TGT TCGG                 TTACATCCTGCGGCG  52 101
CXD87_RS15800 NONE
CXD87_RS15805 NONE
CXD87_RS15810 NONE
CXD87_RS15815 3294705 .. 3294715 +  -2.4  -4.41348   CGTCCCGGTGGACCC                 CGTG TAA CCCG                 TTTATTTCCCAGCCC  65 19
CXD87_RS15820 3296304 .. 3296343 +  -5.7  -3.54408   GACCGCGGCTTCCAG GAGTTCGG-CGTCGCTGTC GGCC GACAGCG-CGACCGAGCAG  TTCATTTCGCTGGGA  57 197
CXD87_RS15830 3297699 .. 3297709 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 121
CXD87_RS15835 3298748 .. 3298769 + -10.1  -3.01712   CTCTACAATCGGCAG           CGCCCGG ACGTCGAG CCGGGCG            TATTGCCGGCCGCGC  60 60
CXD87_RS15845 3299960 .. 3299987 +  -6.2  -2.79188   CGCCAGCGGATCGGG        CGTGAGCGTGCCG CGG CGGC-CGTTGGCG        TAGTTGCCTTCGATG  46 163
        lptD NONE
CXD87_RS15870 NONE
        rsmA 3307536 .. 3307574 + -10.3  -3.01712   GCGCCACCACCGGCA  CGCCGG-CGGCGCTGGC GATGCGG GCCA-CGCCGGCCGGGG  TCTTGCCGCGCAGCG  59 254
         pyk 3310460 .. 3310493 +  -5.2  -3.61398   GTTGAAGCCGTCCTT     GGCGCCGG-CGATGA AGGTC TCGTAGACCGGCACC     TTCTTCCAGGCGCCC  54 454
CXD87_RS15975 NONE
CXD87_RS15980 3326690 .. 3326727 +  -6.1  -2.66787   GCTGAGCGTTCGCGC   GCATCGT-CGCGCACGCC GCT GGTGGGCCCGGGCGCTGC   TCATCTCGCTGTTGC  46 36
CXD87_RS15990 3327975 .. 3327990 +  -6.2  -5.00616   CTATGCTCGCATACA              CTGTAT GTCC ATACAG               TTTTTTGGGCCACAA  86 294
CXD87_RS16005 3328790 .. 3328812 +  -7.6  -3.63991   CGAGCGCCAACAGCA           TTAGCGGCCG CAG CGGCGGCCAA           TTCTTGAGCGTCATC  60 278
CXD87_RS16125 3345380 .. 3345399 +  -4.2  -2.91274   GATCGGACCGAAGCC            GC-CGGCGA CCT TCACCGAGC            TATGCTTCAGCTGAG  43 161
CXD87_RS16170 NONE
CXD87_RS16175 NONE
CXD87_RS16180 3353782 .. 3353799 +  -3.3  -3.54424   ATCGAGGAAGAAGCG             GCG-GCGC TGC GCGAACGC             TTTCAGGGCGTCAAC  49 52
CXD87_RS16185 3354868 .. 3354883 +  -4.6  -3.01712   CAGCGCAAAACCAAC              AGTGCC CTGG GGCACG               TGTTGCAGAGACCCC  45 47
CXD87_RS16190 3355266 .. 3355281 +  -3.2  -3.94438   CACCCGACATCCGAA              GAAAGC ATAT GCTTGC               TATTTTGTTAGCATG  58 167
CXD87_RS16205 3358471 .. 3358494 +   -21  -2.60496   GGTAAGCAAGCGCGC          GGCCGCCGCG CTGG CGCGGCGGCC           CTGTTTCAGGCCGCC 100 36
CXD87_RS16240 3364839 .. 3364879 + -12.4  -2.73875   GCTGAGCGCGGGTGT CGCAGTGGCCGGCGCGCGC CCGG GCGCGCGCC-GCTTCAGGG  TCGTATTCCGAGGAA  65 36
CXD87_RS16245 3366324 .. 3366353 + -15.7  -3.01712   TGGCCTGACGCACGC       GGAGGCGGCGCGCC TCA GGC-CGCCGCGTCC       TCTTCCAGCCAGGGG  77 33
CXD87_RS16260 NONE
        recQ 3370778 .. 3370805 + -16.2  -3.14344   GGCGGTTGGCGATAC        GCGGCGTGCCGC GCGA GCGGCGCGCCAC         TTCGTGCGCGCCGTC  80 410
CXD87_RS16275 3372627 .. 3372645 +  -6.6  -3.40403   AATGATGCTACAGGG             GGCTGCGC GAT GCGTATCC             TTGTCATCGGCGGAA  55 90
CXD87_RS16280 3373750 .. 3373780 +  -6.6  -3.39784   TCCGCGCCCAGCTTG       CCGCGCATCTCCAG CAG CAGGCGCTCCGCGG       TCTTCTTGCCGATGC  55 228
CXD87_RS16315 3379552 .. 3379605 +  -6.5  -3.18264   CTATTCGCGCATCAG GGCTTCGATCTCGCGCGCCTGCACCG GCA CGCCGCGGGTGA-TGAGTTCGCAGCC TTCCTCGGTCACCAG  51 50
CXD87_RS16325 3382424 .. 3382448 + -14.3  -2.87132   CAGAGCACCCATCTG          CCGCATCCTGT CAT GCAGGGTGCGG          TATGTCCGACGCGCA  71 218
CXD87_RS16330 3383162 .. 3383176 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 215
CXD87_RS16340 3385221 .. 3385232 +  -2.2  -3.53566   TGCGGGTTTTGGCAT                CGGA CCAG TCTG                 CTTTTCTTCTTGGCT  48 224
CXD87_RS16345 3386443 .. 3386481 + -18.8  -2.79831   GCGCGTCGTCAACTA   CAATCAGGCGGCGAGGCG TCG CGCCTCGCCACCTGCTGG   CTGTTTTCGGATGAC  87 58
CXD87_RS16350 3387386 .. 3387418 +   -10  -3.53012   TGAGCGCGGCTTCGA     TACC-CGGCCTTATT CCGG AATCAGGCCGTGGTA      TTTGCGGCCCAGGGC  67 38
CXD87_RS16360 3389855 .. 3389874 + -11.4  -3.21354   TGGATGCCGGCAGCG            TTGCGCGG CCAG CCGCGCGA             TTGCTGGCTGTATGC  66 53
CXD87_RS16385 NONE
CXD87_RS16390 3393973 .. 3393987 + -12.8  -4.27316   CTGCGCCAGCTTGCT               GCCCCC CAG GGGGGC               TTTTGCCTTGGGGCG  91 69
CXD87_RS16395 3395734 .. 3395752 +   -11  -3.13403   CGCCTGCACCAGCAG             CGTCGGGA AGT TCTCGACG             TCTTCCTCGCCCAGC  64 190
CXD87_RS16405 3396861 .. 3396871 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS16410 3397886 .. 3397911 +  -9.7  -5.00616   TCTAGCGCATTGCCC         TGCACGCCCCCC CGG GGGGGGCCT-CA         TTTTTTCCGGAAACC  95 36
CXD87_RS16415 3398857 .. 3398885 + -12.3  -2.87132   TGCTCCTTGTTGCGG        TGCCGCATCGGCG CCG CCCCGGGGCGGCA        TCTATCCGCAACCAC  66 139
CXD87_RS16420 3399908 .. 3399920 +  -9.1  -3.71917   AGCCTGACTAACAGG                CGACC TGG GGTCG                TTTCCGGTTTCCGGT  68 183
CXD87_RS16425 3404377 .. 3404435 + -22.6   -2.5474   CGGCGGGCGCGCAGG CCTCG-CCCGATCGGCCGGCCGGGCCGCGC GAT GCGCGGCCCGGCCG-C--ATTGGGACGCGG CCTTTATTGCTTTTC 100 57
CXD87_RS16435 3406451 .. 3406471 +    -9  -5.40072   GCAGAGCTGGAATTC           G-GGCCACC TTCG GGTGGCCTC            TTTTTTTGCCCAAGG 100 95
CXD87_RS16465 3411287 .. 3411309 + -16.2  -3.34715   GACACCATGAGGGGC           GGCCGGCCCG GTT CGGGCCAGCC           TGTTTCCAGCACGTC  82 158
CXD87_RS16525 3422349 .. 3422397 + -13.8  -3.35679   CGCCGCAGGTCGTTG CGGCCCGGCGTGCCCGGTCCGC GCCGACA GCGG-CCGGGC-CGATGGCCCG TTCTCACTGGAAGGG  77 207
CXD87_RS16530 NONE
CXD87_RS16535 NONE
CXD87_RS16540 3426040 .. 3426089 +  -9.7  -5.07011   ACCGCATCGGCGGCG CGTATTAGGGCTGGCGGGCGTCC GTCG GGACGCCGCCCGGCCCGGGATCG TTTTTCCTTTATCTG  95 18
CXD87_RS16550 3429362 .. 3429413 +  -3.6  -3.14132   TTGCACCCTTCACAG CGCGCCCGA-GCCGCGCCCGGC GGCCAGCCAG GCCGGGT-CGGCGTAGGAGGCG TTGATGCGCGAGGCC  45 125
CXD87_RS16560 3431230 .. 3431246 + -13.7  -5.60993   GCGGCCCACGAAAAA              GCCCTCC AGC GGAGGGC              TTTTTTTCTGAGGCG 100 47
CXD87_RS16575 NONE
CXD87_RS16580 NONE
        ftsY 3439303 .. 3439328 + -20.5  -2.90496   GTTCGCGCCTGCCCG         CAACGCCGCCC GTCC GGGCGGCGTTG          TCATTTCCAGAACGG 100 46
CXD87_RS16655 NONE
CXD87_RS16660 NONE
        nusB 3449759 .. 3449791 + -11.1  -3.72695   GCGGCGCTGACCTTC      CGCGGGCGCGCCCGC GCG GCGCGTCCGTTCGCG      TTTGCTGGCAGGAGT  73 31
        thiL NONE
CXD87_RS16675 NONE
CXD87_RS16680 3452005 .. 3452048 + -14.4  -3.28745   CAGGCACCCTGAGAA GTCAGCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGGGGGG TTACGTTCTTACCGC  75 119
CXD87_RS16705 3458978 .. 3459001 + -19.6  -6.06723   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTTGGGAAG 100 44
CXD87_RS16755 3469715 .. 3469725 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 192
CXD87_RS16765 3470764 .. 3470774 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS16770 NONE
CXD87_RS16775 3472727 .. 3472741 +  -3.4   -4.2828   ACTTCGCCGCCATCG               GGCAGC ACG GTCGCC               TTTTCCTGGATGCGG  67 245
CXD87_RS16790 3475496 .. 3475522 +  -2.8  -5.06103   CGGGAGCAGCGCGGC         TTGTCCGGCTGC CCA GCGGTCTGGCTA         TTTTTTGCAAATTGT  79 442
CXD87_RS16800 NONE
CXD87_RS16805 3476262 .. 3476305 + -22.8  -2.72471   TGTCCTTCATCGCGC ACAAAACAAAATGCCCGCAA GCGA TTGCGGGCATTTTGTTTTGA ATTCTCTGGTGGCGC 100 80
CXD87_RS16825 NONE
CXD87_RS16830 3481137 .. 3481150 +  -5.9  -3.30474   GCCTGTTCGAGCGCT               GGCTG TAGC CGGCC                TTGCTAGTTGTGAAC  53 18
CXD87_RS16855 3486855 .. 3486877 + -12.7  -4.57569   GGCGCAAAGAAAAAA          CCCCGG-CGC TTGC GCGACCGGGG           TTTTTGGGCACATCA 100 57
CXD87_RS16865 3487795 .. 3487823 + -15.4  -3.72576   CGCGGCAAAGAGAAA       GCCCCGG-CAATC ATGC GATTGACCGGGGC        TTTCATGAAGGCAGG  85 46
         rnr 3490811 .. 3490836 +  -6.7  -4.08064   ATTGCACCGTAGACC         GGGCCGCAGGGC CCG GCCC-GCCGCCG         TTTTCCGGCGGCGTT  67 80
        rlmB 3491630 .. 3491652 + -12.6  -3.03124   GTAAACTCTTGCAGC           GGCGCGCCGT CGC GCCGCGCGCC           TCTTCGAACGTCCGA  67 37
CXD87_RS16885 NONE
CXD87_RS16890 3493717 .. 3493731 +  -3.4  -4.66537   AAGCTAGTATTGGCG               CGGCTC AGG GCGCTG               TTTTCTCTTGACAGC  71 105
CXD87_RS16895 3494247 .. 3494259 +  -9.1  -3.64703   GGACGCAAAGGCAAA                TCGGC GCT GCCGA                TTTGCCTAACAAAAC  68 42
CXD87_RS16900 3494481 .. 3494514 + -12.4   -5.4505   AAGCAGGCGCAATAA    CCCCG-GCGAGGGCGC ATCG GCGCAC-CGCACGGGG     TTTTTTGTTGCGCGC 100 92
CXD87_RS16905 NONE
CXD87_RS16910 NONE
CXD87_RS16915 NONE
CXD87_RS16920 NONE
CXD87_RS16925 NONE
CXD87_RS16930 3500884 .. 3500896 +  -4.7  -3.69068   GGACAGGCACCCTCG                CGCGG TTG CCGCC                TATTTCTTGCCGTCC  55 98
CXD87_RS16950 3505364 .. 3505422 +  -4.3  -3.15544   GTGGCGCATTCCCAG --GGCAGCGCGCGGCCGGTCTGTGGGCTG GCG TAGCCCACCGTCCAGTGGCCCGCCGCCAA TTCGTCCGGGTGCCC  45 331
CXD87_RS16980 NONE
CXD87_RS16985 3511247 .. 3511257 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS16990 3512261 .. 3512273 +  -4.7  -3.57144   GACAGTTCACAGCTA                GCGGC CGG GGCGC                TTTGCGGCTCGGGCC  54 25
CXD87_RS17000 3514645 .. 3514673 + -13.1  -3.14564   GCTCGAAGCGCTTCT        TGTCCACGCCGCC ATG GGTGGCGTAGGCA        TTCATGCGCAGCTGC  68 275
CXD87_RS17030 NONE
CXD87_RS17035 3520097 .. 3520123 +  -6.4  -3.87373   AAGCGGCCCTCAGTG         GGCCGAGTCGAG GGC CTTGCCGTGGCC         TTTCTGGCCGATCTG  62 50
         smc 3525207 .. 3525228 +  -2.9  -3.28447   AACCCATATTCGGAT           TTGCGCTGCC TTA GGC-GCGGGA           TATTCTCATGAGTGA  46 41
CXD87_RS17050 NONE
        ligA 3528418 .. 3528447 + -19.5  -3.15663   CCCGGCAGCCGAAAA       CAAAATTGCCCGC GAAA GCGGGCAATTTTG        TTGATGGCGATGGCT 100 59
CXD87_RS17080 NONE
CXD87_RS17085 NONE
CXD87_RS17090 3532576 .. 3532592 +  -4.3  -3.05471   CCGGATTAGGGTTGA              TCCCGGT GGG GTCGGGG              TGGTTATTTGATACT  45 131
CXD87_RS17095 3533942 .. 3533965 + -19.6  -2.62735   TCTCCTGCTTCACCT          CGCACCGGCC TGAG GGCCGGTGCG           TCGTATGCGCCGTGT  93 101
CXD87_RS17100 NONE
CXD87_RS17105 3537222 .. 3537241 +  -7.8  -3.29461   CCGCGACATGGCCCG            CGCCGTCG AGCA TGATGGCG             TTGTCGAAGCCCTTG  55 392
        pncB 3549032 .. 3549049 + -14.1  -4.17048   GGTGTTCCAGCTTCC             GCCGGCC TGAG GGCCGGC              TTGTTTTCGCCAACC  91 16
CXD87_RS17175 3549532 .. 3549571 +   -18  -4.08945   CGCGCCTCGGGACGG  TACAGGCATTGCGGCATC GGCC GATGCCGCAATGCCTTCA   TTTTGCCGGGATGGT 100 114
CXD87_RS17190 3553277 .. 3553291 +  -4.2  -4.09685   CGGGGGCGGCCGCGT               GCCCTA CAC TAGGTC               TTTTGCACGCTCCGG  61 64
        argE NONE
        trpB NONE
CXD87_RS17205 NONE
CXD87_RS17210 3557572 .. 3557603 + -10.8  -4.67353   CCCGCCGGCAGTGCC      TGCGAACGCCCGGC CCAG GCCGGGCGTTGTTA       TTTTTCCATGCATGC 100 46
CXD87_RS17220 3559556 .. 3559609 + -13.7  -3.68359   CCCTTGCCGCAGCGG GGACAATTGGCGGGTGCCAGTCCCC CTGC GGGGACAGGCACCCGAGGAGTGGTC TTATGATTTTCCGGC  80 86
CXD87_RS17225 3560720 .. 3560746 + -23.8  -3.92869   GCACAGCAGGAAAAA         GCGGGTTGCGGC GCT GCCGCAACCCGC         TTTGTGCGTCAGTGA 100 66
CXD87_RS17235 3565354 .. 3565366 +  -4.1  -3.42809   CAACTGGAGACGGCC                TGACC ATG GGTTA                TTCGTTGGTGGTATT  49 23
CXD87_RS17240 3566080 .. 3566137 + -15.6  -3.27408   CTGTCTTACCTGGAT CGGCGCCATGCG-CGCGCTG--CCGTCGC CCG GCGACGGAATAGCGCGGCGCACGCCACCG TCTATTTGGGTAAGA  80 75
        msrP 3567123 .. 3567139 +  -2.1  -3.16564   AGCCTCTACCAGGGC              CTGGACC TGC GGGCCAA              TTACTGAGGTCCCCA  42 2
        msrQ 3567982 .. 3568016 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS17265 3570190 .. 3570221 +  -5.1  -4.03234   TCAGGTCGCGCACCA      GCTG-CGCCAGC CTGGCGGCC GCGGGCGTCAGC      TTTCTATGCCGCAAC  63 77
CXD87_RS17275 NONE
CXD87_RS17280 3573130 .. 3573179 + -13.5  -3.96148   GCCAGGCCACCGACG TGGC-CGCCC-GCGCCGCGGGCG AAAAGC TGGCCGCGGCGCTGGGCCAGCCG TTTATCGTGGAAAAC  84 219
CXD87_RS17290 3574241 .. 3574258 +  -2.7  -3.14132   GCCGGCCAGGCCCGC             GGCAA GATAGGCA TTGCC              TTCGTCCAGCAGCAG  43 303
CXD87_RS17300 3575576 .. 3575621 + -10.4  -3.05384   CTCATTCTTATATAA TGCGTCACGCGCTACTATTC GCCCAA GTTAAGTAGCGCGTCACGCA TTACATGGGCAAGGG  60 117
CXD87_RS17305 3579026 .. 3579036 +  -3.2  -3.59979   AATCCTATTCTTGCC                 TTCC TCA GGAG                 TTTGCCATGCCCAAC  49 39
CXD87_RS17310 NONE
        pruA NONE
CXD87_RS17320 3583247 .. 3583260 +  -5.9  -3.34947   TCGCCGCATGCGTGC               CTGGC TGAT GCCGG                TTGTGGGCCTTGTTG  52 384
CXD87_RS17330 3584089 .. 3584123 + -22.3  -3.53012   CTAGGCGCGCTGCCC    G-CAAAGGCCGCCCGG CATG CCGGGCGGCCTTTGTC     TTTGGCGCAACGCAG 100 42
CXD87_RS17335 3585188 .. 3585198 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS17345 3586181 .. 3586220 +  -9.4   -3.5361   CCTGGACAAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD87_RS17350 3587432 .. 3587445 +  -5.3  -2.83403   CCGGCGGCATGGCGA               GAAGA CCTT TCTTC                ATTTCCTGCCGCGCG  46 206
CXD87_RS17375 3594020 .. 3594050 + -12.5  -3.29144   TTGCACGACGCCCCC       GGCCACGTCGGCC AGCGC GGCCGACGTACCC       TTGTACGGCACGTGG  70 423
CXD87_RS17400 3598614 .. 3598624 +  -6.8  -3.51825   CCATCGACGCCGCCA                 TGCG GAA CGCA                 TTCTCGTTCGAGTCC  58 378
CXD87_RS17410 3601514 .. 3601526 +  -6.2  -3.60792   ACTTTCCACAGATCC                CGCC TGTCC GGCG                TTTCACCATTCGAGG  56 89
CXD87_RS17415 3601915 .. 3601935 +  -2.5  -3.13906   GTCAAGGGCGGGTCT           CCC-CCGG GGTGCG TCGGCGGG            TGGTTTTCCGTTAGC  42 46
CXD87_RS17420 3602479 .. 3602504 + -18.3  -5.42862   CCCGGCGCCGTACAC         GCCCCGCCGGCC GCA GGCCG-CGGGGC         TTTTTTTCGGCCTGT 100 51
CXD87_RS17425 3603326 .. 3603354 + -10.3  -3.55444   TAGAGTGACACCAAT       GC-GCCGGCACGG CAAGC CCG-GCCGGCCGC       TTTCCCCCATCCAGA  67 89
CXD87_RS17445 3608015 .. 3608049 +  -8.5  -2.71364   CCGCGTAGAGCTCGC    GGCTGATCACGCC-CC GGGT GGCGGCGTGCTCGGCG     TACTTGGCGCCCTGC  52 504
CXD87_RS17495 NONE
CXD87_RS17500 NONE
CXD87_RS17505 3619773 .. 3619789 + -15.1  -5.75945   TTCCGTTTTCCTCCT              GCCGCGC TCT GCGCGGC              TTTTTTTTGGGGCGT 100 55
CXD87_RS17510 NONE
CXD87_RS17515 NONE
CXD87_RS17520 NONE
CXD87_RS17525 NONE
CXD87_RS17530 NONE
CXD87_RS17535 3626661 .. 3626697 +  -9.9  -3.69395   GGGCAGCGGCCGCCG    CAGCACGGTGGCCGGCG CGG CGCTGGCCAACGCGGCG    TTGTTCCATGGTCGA  70 303
CXD87_RS17545 NONE
CXD87_RS17550 NONE
CXD87_RS17555 NONE
CXD87_RS17560 NONE
        lpdA NONE
CXD87_RS17570 3634791 .. 3634812 +  -4.3   -2.5474   GGCCTGCGCCAGCAG           CC-GTTCGGC GTT GCCGTGCAGG           ATCTTCTCCATCGCG  42 103
CXD87_RS17590 3639419 .. 3639452 +  -7.3  -3.65902   GTCAGCGGGTGCCTG     TCCCCCGTGCGGG GACAGGCA CCCGGGTGGGGGG      TTTACATGCGCTCGA  61 50
CXD87_RS17600 3641746 .. 3641784 +   -11  -3.20723   TGCCCGCTGCCGATG  ATGC-CCACCAGCGGCG CGAACA CGCCGGTGGTGGCGCAG   TTGAGTTCCTCGACA  64 224
CXD87_RS17625 NONE
        grxC NONE
        secB NONE
CXD87_RS17640 NONE
CXD87_RS17645 3649969 .. 3650006 + -13.3  -2.79183   CGCGAAGATGCGCGG   CGCAGCCGC-GCCGGTGG CCG CCAGCGCCTGCGGCAGCG   TGTCGTGCACCTGCA  67 293
CXD87_RS17660 3652158 .. 3652170 +  -9.1  -4.09685   GGTGTCCTGGACGCC                CTGGC CGC GCCAG                TTTTGCGCCATGGAC  72 173
CXD87_RS17715 NONE
CXD87_RS17720 NONE
CXD87_RS17725 NONE
CXD87_RS17730 3668011 .. 3668061 +  -8.1  -4.32857   GAGGACGGGCTCCCA GGGTTCGGCAGGTGCCTGTCTCC CGTGC GGGGACAGGCACCTGAGTGTCAC TTTGTCTTTGCCAGC  77 49
CXD87_RS17765 3674425 .. 3674452 +  -6.2  -3.17714   GCGGCTGTACTGATT        GTTGGCGTCGAC CAGC GTCGACAGCAGC         TTCATGAAGATTTCG  50 69
CXD87_RS17805 3683877 .. 3683889 +  -7.7  -3.61398   CAGCGCGATCGTGCC                CGTCA GGT TGACG                TTCTTGGGAAACCGG  60 299
CXD87_RS17815 NONE
CXD87_RS17820 NONE
CXD87_RS17825 3686527 .. 3686537 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS17835 NONE
CXD87_RS17845 NONE
CXD87_RS17850 3689793 .. 3689835 + -14.2  -3.33696   CATGAAGCACTGATG CGGTACG--GGGCGG-CGGCC CGCA GGCCGTCCGCCCCGCGCACCG TTCATTCCAGGCGGA  75 28
CXD87_RS17865 3693164 .. 3693188 + -14.9  -2.90075   CGCCGGTATCGATTT          CGCTGGCGGCC TGA GGCCGCCGGCA          TATGGTTCGAACGCC  73 12
CXD87_RS17870 3694746 .. 3694760 +  -2.7  -3.72576   AGGCCTGGCCGGACA               GCGGC AACGG GCCGA               TTTCCTGCAGCAAGG  53 464
        kynU NONE
CXD87_RS17900 NONE
CXD87_RS17905 NONE
CXD87_RS17910 3700755 .. 3700782 +  -3.2  -3.54424   CCCGTTCTTGATGTC        CGCGGC-GCGCGC GCC GCGCCCTGACCCG        TTTCCGACCGTCCCA  49 49
CXD87_RS17915 3702003 .. 3702017 +    -7  -2.62983   CGAAGCGCGCCAGCA               GCGCCG GTT CGACGC               TGATCTCGGCCTGCC  48 293
CXD87_RS17940 3705012 .. 3705039 + -19.2  -3.02324   GCGCCGTGTTGATTC        GGTGCCTGTCCC GACA GGGACGGGCACC         TGTGCTTTCGATCAG 100 57
CXD87_RS17955 3708186 .. 3708227 +  -6.5  -3.11634   CCGGCCGAATCGCTG TCGGTGCCGGTG-AGCGATC TGT GATCGGTGCGCCTGCACGGG TTCCGTCATCTGGGG  51 2
CXD87_RS17960 3709373 .. 3709423 + -18.9   -3.6579   GAGCGATCGACAGGG CGGCGGCGCCTGGCCGATGGCAGC CGGC GCCGCCGCCGGCCAGGCGG-GCTG TTGTTAGAATCCCTT  95 39
CXD87_RS17965 3710284 .. 3710318 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS17980 NONE
        rocF 3713464 .. 3713474 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 80
CXD87_RS17990 3714633 .. 3714647 +    -7  -3.41693   GCCCGATTTGGCGTA               GCCGGC CAC GCCCGC               TTCGTTCATGGTGGG  58 180
CXD87_RS18055 3730404 .. 3730430 +  -2.1  -3.61178   CCCTGGCTGCAGGCG         TTCCGGCCTGC CGTCC GCTGACCCGAA         TTTCCGATCCATCCG  48 5
CXD87_RS18060 3731642 .. 3731656 +  -2.7  -4.07568   GCAATACGCTATGCT               CGACG CGCGC CGCCG               TTTTCGCCGGCGCAG  59 70
CXD87_RS18065 3732097 .. 3732121 +   -15  -4.57073   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG 100 49
CXD87_RS18080 3734584 .. 3734594 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 71
CXD87_RS18085 NONE
CXD87_RS18090 3736272 .. 3736288 + -10.8  -5.10497   GGCCGTAGTTCAACA              GCCCGC CTCGA GCGGGC              TTTTTTGCGTCGGTT 100 47
CXD87_RS18095 3736694 .. 3736704 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS18105 3737697 .. 3737742 +    -6  -2.89564   TACAACCTATTGACA GTTCACACCTAACCCCCACC CGCCCC GGTAGGGGCTAGGAGATAAC TGTGTCCGATACCAA  48 14
CXD87_RS18110 3738300 .. 3738310 +  -2.4  -3.39895   GTGCAGGTAATGGCC                 CAGC TCG GCGG                 TTCGTTCATGAAGCA  46 114
CXD87_RS18120 NONE
CXD87_RS18125 NONE
CXD87_RS18130 NONE
CXD87_RS18135 3740643 .. 3740657 + -12.8  -3.02511   CCGCCTGATCTCCCT               GGGCGG CGC CCGCCC               TATTACCCACGTAGC  67 33
CXD87_RS18140 NONE
CXD87_RS18145 NONE
CXD87_RS18150 NONE
CXD87_RS18155 NONE
CXD87_RS18160 3743487 .. 3743497 +  -8.2  -3.54424   CAGCAGCTCGCCTGA                 CCGC ATG GCGG                 TTTCGAGGGATAGCA  63 406
CXD87_RS18180 3748493 .. 3748521 +  -4.4  -3.44622   ACTTCGACCGATTCC        CCGCGCTGGTTG GTCAG CGGCCAGCGCAC        TTCGTTCTGCGGGTC  49 329
CXD87_RS18195 3750723 .. 3750742 + -16.4    -3.767   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC  91 219
        dnaA NONE
CXD87_RS18225 3756353 .. 3756366 +  -2.3  -5.03145   CGCGCGCGAACGGTG               TGGCC GTGA GGCTG                TTTTTTAAGGCGTTA  79 81
        gyrB 3758873 .. 3758894 + -13.7   -4.4078   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG 100 53
CXD87_RS18240 NONE
CXD87_RS18245 3762656 .. 3762710 +  -6.3  -3.76759   CCTGCAGGCGTGCGC GAGGGGCGGCGTAT-ACTGGCTCTCGC CGC GCGAAGGCCGGCCAT-CGCCGTGCCGC TTTCCTGACCTTCAT  62 369
CXD87_RS18255 3763948 .. 3763998 +  -6.3  -3.44848   GCAAAATCTGCAAAG CGGG-CTT-GGCTACATTGCGTTC ACTGGA GATCGCA-TGAAGCCCAAGACCCG TCTTTACTACGCCGA  55 79
CXD87_RS18260 3764842 .. 3764855 +  -9.5  -3.26471   GCGTTGCAGGCCCGC               CCGGG CCGG CCCGG                TTACTATGGCCGTAG  61 40
CXD87_RS18270 3767796 .. 3767825 +  -8.7  -3.09681   ATGATGCAGTGCAAA       TATTACGTTTACG TAAA CGTAAACGTAAAG        TTGAGTCGGGTTTTC  56 487
CXD87_RS18285 3769589 .. 3769623 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 218
CXD87_RS18305 3774516 .. 3774529 +  -3.1  -2.79796   CATCAACGCCCCACG               GGTAT GCCC ATGCC                TATCATCGAATCCCG  40 117
CXD87_RS18310 NONE
CXD87_RS18315 3778196 .. 3778234 +  -6.7  -3.14931   CGCTGATCGAAGTGA  AG-TGA-ATGACGCCGGGC GCG GCCCGGCGTCGGGTCAGCC  TTGCTCCGGCGTGAC  52 21
CXD87_RS18330 3781002 .. 3781039 +    -9  -2.70932   TGCCCAGCGCCGGCG   CGGGCGCGCCG-GGCTC CACCC GCGCCACGCCGTGCTCG   TCGTTGGCGGCGAGA  52 188
CXD87_RS18340 3783220 .. 3783232 +  -6.2  -2.64155   CGTCCCGACTCCAAT                GCGC CAATC GCGC                TGCCTTTCCGCCAGG  46 70
CXD87_RS18345 3785357 .. 3785386 + -20.9  -3.29144   CGGGCGCCGACGCAA       TGCACAACCCACC GCAA GGTGGGTTGTGCA        TTCTGGACGCGGTCG 100 59
CXD87_RS18350 3787825 .. 3787844 +  -3.4  -4.07568   GAAAACGTGAAGACC            GCGCGCAG CGCA CTGCCCCC             TTTTACAGAGCCGCG  59 87
CXD87_RS18355 3788514 .. 3788549 + -16.8  -2.70525   GATGCGGCCGCGCCA    GACATGGCGCGCCGGC CCGT GCTGGCGCGCCATCGC     ATTGATTTCCGGAAC  80 39
CXD87_RS18370 3794817 .. 3794839 +  -5.4  -3.50853   GCACCGCGCGGTCCA           CGCGACCGAC GCG GCCAGTTGCG           TTATCGTTGCCGCAA  54 102
CXD87_RS18375 3795941 .. 3795951 +  -8.2  -2.82635   GCGATTCGTGCGCAA                 GGCC CGG GGCC                 TGTGATGATCGAGCT  54 10
CXD87_RS18380 NONE
CXD87_RS18385 NONE
CXD87_RS18390 3798368 .. 3798389 +  -3.5  -3.64822   AGTTCTGAGCTTGCC           CGACCCGCG AGGC TGCGCGCCG            TTTCCCTGCAGGACT  54 33
CXD87_RS18395 NONE
CXD87_RS18400 3801095 .. 3801142 +  -2.7  -3.02511   TGGCGGTGGACAACT CC-TGGATGTTCATCAGCACCGA CGCG TCGCCGCTGACGCACA-CCACGG TCTTGCCGGGATGCG  41 467
CXD87_RS18410 3803241 .. 3803257 +  -5.7  -3.28712   GATCGCGCGCCAGCG              CGGCCAG CGG CAGGTCG              TTCTCGGCCAGGCCG  52 137
CXD87_RS18420 3804947 .. 3804977 +  -8.9  -3.21063   TGTGCCGGCACTTTC      CCGC-CAGACGGGC GCTC GCGCGCCTGCGCGG       TATTGCGTTTGGCTG  56 299
CXD87_RS18425 3805984 .. 3805994 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 270
CXD87_RS18435 3807035 .. 3807083 +  -9.7  -3.03159   CGGCGCACGTCCTCT TCGGCG-CGGCC-GCTGCGCGCCAC GTA GTCG-GC-CAGCTGGTCGGCGCCGA TGTTGCCCACGTTGA  59 62
CXD87_RS18445 NONE
CXD87_RS18450 3813906 .. 3813928 +  -8.4  -4.05714   CGCGGCTGAGCCCGC          GC-CGCCGG CCAGCC CCGGCGTGC           TTTATCATTGGCCCT  72 32
CXD87_RS18455 NONE
        thiD 3815690 .. 3815700 +  -3.2  -4.21462   GTTGACTCCCCTATA                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  63 67
CXD87_RS18465 NONE
CXD87_RS18470 NONE
CXD87_RS18475 3817934 .. 3817974 +  -6.8  -3.05268   CGTGAAAAGAAGTCA CCGCGTCGACGCAGC CCAGGGCCGCCA GCAGCG-CGGCGCGG  TCTTGCACCTGATTG  48 246
CXD87_RS18485 3819592 .. 3819605 +  -3.7  -2.87132   GCGCCCTGCGACCCG               GGCGC GCCC GCGCA                TCTGTAACAGGGACG  43 97
CXD87_RS18490 NONE
CXD87_RS18495 3821733 .. 3821764 +  -4.4  -3.72576   CAGGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  55 92
CXD87_RS18500 3823144 .. 3823178 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD87_RS18515 NONE
CXD87_RS18520 NONE
        fusA NONE
         tuf 3829097 .. 3829122 + -11.1  -4.62203   AGCAGTACCCAACCA         GTGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CXD87_RS18535 3829494 .. 3829533 + -20.2  -3.53091   TGTGGCGCAGCTCGT  GAAAAATGGCCGCATTCC CCCG GGAGTGCGGCCATTTTGC   TTTGGCGCGACAGCT 100 63
CXD87_RS18540 NONE
CXD87_RS18545 NONE
CXD87_RS18550 NONE
CXD87_RS18555 NONE
CXD87_RS18560 NONE
CXD87_RS18565 NONE
CXD87_RS18570 NONE
CXD87_RS18575 NONE
CXD87_RS18580 NONE
CXD87_RS18585 3834617 .. 3834639 + -17.8  -5.84381   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG 100 70
CXD87_RS18605 NONE
CXD87_RS18610 3838714 .. 3838725 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAGTT  44 31
CXD87_RS18615 NONE
CXD87_RS18620 NONE
CXD87_RS18625 NONE
CXD87_RS18630 NONE
CXD87_RS18635 NONE
CXD87_RS18640 NONE
CXD87_RS18645 NONE
CXD87_RS18650 NONE
        secY NONE
CXD87_RS18660 NONE
CXD87_RS18665 3843810 .. 3843829 +  -2.8  -3.08812   GCGTCAAGGCTAACC            CAGTTAGCG GTA CGC-AACGG            ATTTATTCAAGGAAC  44 28
CXD87_RS18670 NONE
CXD87_RS18675 3844609 .. 3844624 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  44 3
CXD87_RS18680 3845339 .. 3845368 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  78 98
CXD87_RS18685 3846477 .. 3846505 + -21.7  -2.84218   CCGTAAGCAGTCAAG        CGCGGTGGGCGCG CCA TGCGCCCGCCGCG        ATGTTTTCATGCATC 100 35
CXD87_RS18690 3847042 .. 3847071 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCGCGCG 100 46
CXD87_RS18700 NONE
        dsbD 3849904 .. 3849957 +  -3.1  -3.04144   GCTCCTGACGTTGCT TCGTATC-GCCTCGGGCGCGC-CCG AGGCGA TGGCGTGGGCGAGAGGCTGGTACGA TGTTGCCCATACCAG  42 33
CXD87_RS18710 3851156 .. 3851166 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGGCGC  52 207
CXD87_RS18725 3853619 .. 3853645 +  -6.4  -5.14563   CCGTTGTCTATGAGG         GGGGGGAAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAACGC  90 112
CXD87_RS18730 NONE
        ccsB 3857109 .. 3857138 + -22.3  -3.54459   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 44
        cyaY 3859481 .. 3859534 + -17.3  -2.80816   CGACGTCGCTGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCACGCAGCA TATCGTCCATGACGA  78 513
CXD87_RS18760 NONE
CXD87_RS18765 NONE
CXD87_RS18770 3864565 .. 3864620 + -14.6  -5.14965   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCCGGCGGA TTTTTTCGTCCGCGT 100 120
CXD87_RS18785 3869674 .. 3869692 +   -16  -3.44848   GCTTCACCCAGTATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  82 142
         ssb 3870322 .. 3870337 + -10.4  -5.78622   CGCTGGATGCGAAAG              CCCTGC CCAG GCAGGG               TTTTTTTTCGCCTGG 100 57
CXD87_RS18795 NONE
CXD87_RS18800 3873163 .. 3873175 +  -4.8  -3.32844   GGGCTGGGCCGGGCC                GCGA TCGAT TCGC                TTATCCGCTGACCGC  49 2
CXD87_RS18805 NONE
CXD87_RS18810 NONE
CXD87_RS18815 NONE
CXD87_RS18820 3876045 .. 3876087 +  -7.4  -2.79796   GCCAGCATATGGGGC ACCTGCACCGCCACGTCGCG CGT CACGCCCAGGCGTTGCAGGG TGTCCTGCAATACGC  49 284
CXD87_RS18830 NONE
CXD87_RS18835 3879631 .. 3879661 +  -3.2  -2.63301   GGATCTTTCCTGCCA       GCAGTGTGTCTATG TAC TACATTCACACTGC       TACTCTCAGAATGTC  39 137
CXD87_RS18840 NONE
CXD87_RS18845 3881676 .. 3881699 + -17.4  -3.28712   GCCCCGCAGCGGGGC          GCGGCTGGCC GCAA GGCCGGCCGC           TTGTCGCCCGCACGC  86 59
CXD87_RS18850 NONE
CXD87_RS18855 3883818 .. 3883841 + -17.4  -3.97331   GACACGATTGTCCTG          CCGGCGGGCG AGGC TGCCCGCCGG           TTCTTTGCCTGGATT  95 44
CXD87_RS18860 NONE
CXD87_RS18865 NONE
CXD87_RS18870 3887015 .. 3887032 +  -9.9  -3.72576   TCATGATTTCCTCTT             TTCGCAC GGAC GTGCGAA              TTTAATCGAAAAAAA  71 284
CXD87_RS18915 3895583 .. 3895598 +  -4.6  -2.53382   CCGCCGATTGACAAG              CCTGGC CGGC GCTGGG               TAGATTGCGCCTACT  42 30
CXD87_RS18920 3896707 .. 3896745 + -10.9  -3.73224   AGCGGGCGCATACCT  CGCTTGAAGGCGGCGGCC GCAT GGCCGCCGTCG-CAGGGG   TTTCGTACCCCATCG  73 39
CXD87_RS18955 3901649 .. 3901668 +  -4.8  -3.35679   CCTGGCCGAAGGAGC            GGCCTGAG GCGC CGCCGGCC             TTCTCCATCCACGAA  51 19
CXD87_RS18965 NONE
CXD87_RS18970 3904808 .. 3904847 + -13.5  -2.78715   ACTGAGGCTGCGCGA TCGCCC-GC-CCGCCGCGC GTGC GCGCGGCGCCGCTGGGCGC  TATAATGCGCAACTT  67 36
CXD87_RS18975 3905421 .. 3905448 +  -8.4  -3.06831   AGACCTCCTCGAGTG        GCGCCG-TGGTGT CGA ACGCCATCCGCGC        TTGCGTGAACGTTGA  55 477
CXD87_RS18990 3907421 .. 3907452 +   -13  -2.89668   CATCCCCGACCAGCT      GACCGACTGAGCGC CGGC GCGCTCAGTCCATC       TGTATCCCGCTCTTG  69 16
CXD87_RS19045 3919116 .. 3919128 +  -5.5  -3.55622   ACCTCGCGGTGCACC                GCGTC CTC GATGC                TTTCGCCGACTTCGA  54 315
CXD87_RS19070 3924016 .. 3924028 +  -6.9   -3.7456   GCCCGAGAACGTGGC                CGGCG GCT TGCCG                TATTTCTTGGTGTAG  61 272
CXD87_RS19115 3933391 .. 3933406 + -10.4  -2.57132   TCGCCGGCAGCAAAC              TGCCGC TGGC GCGGCA               ATTCTAGGCGGCGGG  57 3
CXD87_RS19120 3934455 .. 3934465 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD87_RS19125 3935649 .. 3935668 +  -5.6  -3.90112   CACGGCGCACAGGAC            GCCGCGGCC GTC GGCCA-GGC            TTTCCTTCAGGCCGC  60 205
CXD87_RS19160 3942905 .. 3942928 +  -9.4   -3.1372   AGGCCTTGATGTCGT          GCGCCAGCGC TTCG GCGCCGGCGG           TATTGGTGGCCAGTA  59 220
CXD87_RS19190 3947156 .. 3947173 + -12.7  -3.21218   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  69 86
CXD87_RS19220 3952611 .. 3952653 +   -14  -3.23853   CGCCGGCGCCGAATC CTCCGAGGCCGTGCTGGCGG CGG CCGCCGCCGCGGCTTGCGAG TATTGCTTCCACACC  75 147
CXD87_RS19230 3956498 .. 3956545 +  -6.1  -4.63218   GCGGTCTGTCTTGCA TGCGCGG-GCGCCG-CGTACGGC GTCA GGCGGGGGTCAGCGCACCGCGCA TTTTCTTCAGCGCCG  78 397
CXD87_RS19255 3961234 .. 3961263 +   -15  -4.25104   CGGGGCGTTGCATGC       TGCCCACCCGGC CCCTGT GCCGCGTGGGCA        TTTTGCTGCGCCCGC  95 55
CXD87_RS19260 NONE
CXD87_RS19265 3967839 .. 3967851 +  -9.1  -3.18264   GCCTGTCCCCGCGGG                GACGG ATA CCGTC                TTAGTACGTACGGCA  59 101
CXD87_RS19270 3968673 .. 3968687 +  -7.8  -3.28712   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTGAGGCGCCCGC  56 5
CXD87_RS19275 NONE
CXD87_RS19280 NONE
        mlaE NONE
        mlaD NONE
CXD87_RS19295 3972961 .. 3972979 +  -5.2  -4.72386   GGCCACCGCCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  81 45
CXD87_RS19300 3973758 .. 3973769 +  -5.8  -4.07568   AGCCGCGCCGGCGCG                GCTG GAAG CAGC                 TTTTCGGCCAGCCGG  64 185
CXD87_RS19310 NONE
CXD87_RS19315 NONE
        murA NONE
CXD87_RS19325 3977521 .. 3977542 + -18.7  -2.61274   CATCGCCTGAACCCC           GCCGCCCGC GCCG GCGGGCGGC            CTTCCTTGCAGTACC  87 31
        hisD NONE
CXD87_RS19335 NONE
        hisB 3980531 .. 3980545 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCG  42 3
        hisH 3981276 .. 3981288 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  57 39
CXD87_RS19350 NONE
        hisF NONE
        hisI NONE
CXD87_RS19365 NONE
CXD87_RS19370 3983982 .. 3983997 +  -2.4  -2.90496   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAATTTCGGAGAACC  40 7
        tatA 3984254 .. 3984279 + -12.6    -3.889   CCTAGTCCCGGCCCG         GGACCGGC-CC ATGAC GGCGCCGGTCC         TTTCCTATCGTTCCA  81 36
        tatB NONE
        tatC 3985596 .. 3985621 +  -5.3  -2.52676   AAGTAGACGGTTTCA         CGCTTGCCGCGG CCG CC-CGGCATGCC         TACATTGCCGGCATG  44 65
CXD87_RS19390 3986137 .. 3986151 +  -4.2  -2.82327   TTCGCATACCAAATC               CTTGCC GGC GCCAAG               ATTTCAGTATGAGAA  43 43
CXD87_RS19395 3987360 .. 3987403 + -11.6  -2.52516   CCGTCCGGCCGGCAC CATCCCGCATACGTGTTGGC AACC GCCAACGCGCATGCGTGCAG ATTCGTCGTACAAAA  61 67
CXD87_RS19400 NONE
CXD87_RS19405 NONE
CXD87_RS19410 NONE
CXD87_RS19415 3989943 .. 3989953 +  -3.2  -3.63968   ATATTGCGAATGAAC                 CCTT CCG GAGG                 TTTCGACGTTTCCGC  53 28
CXD87_RS19420 3990702 .. 3990720 +    -3  -3.09785   CGGCAGCGTCGATAT             GTTGAGCC GCC GGCTCGGA             TCTGTTCGCCTGTCC  44 21
CXD87_RS19425 NONE
CXD87_RS19430 NONE
CXD87_RS19435 NONE
CXD87_RS19440 NONE
CXD87_RS19445 NONE
CXD87_RS19450 NONE
       virB9 NONE
CXD87_RS19460 NONE
      virB11 3999085 .. 3999095 +  -2.4  -4.29396   ACGCCTGCCGCCTGC                 ACGC ATT GCGA                 TTTTCGTGCATAATT  62 40
CXD87_RS19470 3999214 .. 3999235 + -15.9   -4.7497   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC 100 37
CXD87_RS19480 NONE
CXD87_RS19485 NONE
CXD87_RS19490 NONE
CXD87_RS19495 4004605 .. 4004637 +  -5.4  -3.02043   ATGTGCCTGCTTGCT      TTGCGCACCGGCGT CCATC GCGCCGCGCCGCAA      TCTTCCCACCGCCTT  47 209
CXD87_RS19500 NONE
CXD87_RS19505 NONE
CXD87_RS19510 4008396 .. 4008429 +  -5.2  -3.71873   CGCATCGAATTCCCG    AGCCGGCG-CGG-CAC GCTG GTGGCCGTCGACGGCG     TTTCGCTGTCGCTGG  57 75
        argJ NONE
CXD87_RS19530 NONE
CXD87_RS19535 4013495 .. 4013519 +  -6.4  -2.87344   CGCGCGTGAAGCCGG         CCGCAGCC-TGG CCA CCGTGGC-GCGG         TATATGGAACGCATC  48 416
CXD87_RS19550 4015374 .. 4015395 +  -3.7  -2.70932   CGCCACGCTCAGGTA           GT-CGATCAG CCC CTGCTCGTAC           TGGTTGCGCGCCAGG  40 199
CXD87_RS19590 NONE
CXD87_RS19615 NONE
        glpK 4033255 .. 4033291 +  -2.2  -3.53811   CACGCCGGCGCGCCG   GCCGCGGGGCTG-GCC AGCTGGC GGCGCAGCACCA-GGC   TTTGCGCGCCATGCA  50 138
CXD87_RS19655 4039973 .. 4039989 +  -2.2  -2.70932   CACGACACGCACGGA              GGCC AAGCATGAA GGCC              TGGTTGCGACAACAC  38 14
CXD87_RS19660 4040880 .. 4040893 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4042003 .. 4042048 +  -6.2  -3.18264   CGGCGTGCTCCAGGT TGCCGCGGTTCAGCTTGGGC AGGATCGC GCCCA-GCTGC-TCGCGGTA TTGCTCGATCAGCGC  51 280
        mutY 4046746 .. 4046756 +  -3.2  -3.28924   CCAGCCTGAAGGTGA                 TCTG CTG CAGG                 TTCTGCCGCCCGCTG  47 95
CXD87_RS19685 4048478 .. 4048488 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 144
CXD87_RS19690 NONE
CXD87_RS19695 NONE
CXD87_RS19700 NONE
CXD87_RS19705 NONE
CXD87_RS19710 NONE
CXD87_RS19715 NONE
CXD87_RS19720 4055606 .. 4055625 + -16.4  -6.06723   GGCCGAGCGTGCACG            CCGCCCCG CAAC CGGGGCGG             TTTTTTTTTCGCGCG 100 57
CXD87_RS19730 NONE
CXD87_RS19735 4058326 .. 4058351 +  -5.9  -3.61652   GACGGAAAGGCGATG         CCGGCGTCCGG CTGG CCCGCCGCCGA          TTGATTGTTTACGCA  56 53
CXD87_RS19740 4059802 .. 4059822 +  -2.4  -2.78712   AGACCAAGCCCTATC            CCAGCGAG CCATT CACGCTGA            TCGTTCCGTTCGGCG  38 209
CXD87_RS19755 4062785 .. 4062804 +  -2.8  -4.07568   GCACCGTCACGCGCT            CCAGCGTGT CGA ACAC-CAGG            TTTTCCACAGCCAGG  58 124
        mnmE 4075219 .. 4075237 +  -6.7  -2.62184   CCGCGCCGGCGATGC            GGCC-CAC GATC GTGCGGCC             TGCTATCGCGCAGCC  47 398
CXD87_RS19820 4077327 .. 4077340 +  -2.3  -3.29947   AAACCCGCCATCGCA               CGCTG AAGA CGGTG                TTGCTGTGGTGGCTG  44 49
CXD87_RS19825 4078802 .. 4078816 +  -5.7  -3.06183   TCATCCGTTGGCCTG               CGATC TGCGC GATCG               TTCCATGGCCATCCA  47 74
CXD87_RS19830 4079885 .. 4079917 + -18.4  -3.02144   AAGAAGTAAACCGAT     CGCGCGGCCGGCGGC ATGC GCCGCCG-CCGCGCA      TCTTCCCAACGGTGC  90 32
CXD87_RS19835 NONE
CXD87_RS19840 4081961 .. 4081982 + -15.9  -5.06414   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 46
CXD87_RS19850 4083791 .. 4083802 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CXD87_RS19845 4081961 .. 4081982 - -15.9  -4.65895   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 59
CXD87_RS19815 4074499 .. 4074513 -  -5.7  -4.15788   AACGTCTTCAACAAA               GTCGA TCTGC TCGAC               GCGGCGTTCCAGGGC  69 303
CXD87_RS19805 NONE
CXD87_RS19800 NONE
CXD87_RS19795 NONE
CXD87_RS19790 NONE
CXD87_RS19785 4067826 .. 4067838 - -10.5  -2.78384   GTTTCTTTTAGCACA                GCGCG CGG CGCGC                TCAGGCCTGCTGCGC  57 26
CXD87_RS19780 4066457 .. 4066477 -    -9  -3.12999   GCATGGGACATGGAA            CCGCTCCT TGTTC AGGAGCGA            TCCATTATGAAAACG  59 130
CXD87_RS19775 4065536 .. 4065546 -  -8.2  -2.57344   GACGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTGCG  52 8
CXD87_RS19770 4064428 .. 4064441 -  -2.4  -2.86676   CCGAGGAATCGAAAC               GATG CGCGCC CATC                TCAGCTTCCCTGCGC  40 26
CXD87_RS19765 NONE
CXD87_RS19760 4062709 .. 4062738 - -22.9  -3.48593   GACGCCGCGACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       GGCGGCATTCAGCGC 100 34
CXD87_RS19750 4059923 .. 4059955 - -10.6  -4.17762   GATCGTGGAAAACAA     GGCTG-GCGCCAATG GCAT CATCGGCGCGCAGCA      TGCGAAGAAGGCGAC  89 235
CXD87_RS19725 4055222 .. 4055234 -  -9.1  -3.01791   ACGGCGTCCTGAACA                TCGCC CGC GGCGA                CCGGGTCCGGATGAA  55 446
CXD87_RS19680 4046303 .. 4046333 -  -5.2  -2.52896   CCATCCCCGAACGCA       GCACGGCCATGCTG GTG CTGCACGGCCCCGA       CGGCATCCTGCTGCA  42 379
CXD87_RS19650 4037874 .. 4037891 -  -2.5     -2.97   AAATCAATCTACAGA             GTCGGAC GTTC GGCCGGC              GCGGACGCGCCGGCC  41 112
CXD87_RS19645 NONE
CXD87_RS19640 NONE
CXD87_RS19635 4034729 .. 4034763 -  -2.7  -3.53811   GCGATCCGCCGGAAA    GCCCGGCGCCAGCG CCGTTTCC CGCCGCC-CCGGCC     CGCCGCCTCAGTGCA  49 33
CXD87_RS19630 NONE
CXD87_RS19625 4032815 .. 4032828 -  -8.1  -3.14132   GCTGTCGTGCATGAA               TGCCG ACAG CGGCA                TCCCGCTGTCCGAGC  53 358
CXD87_RS19610 4029842 .. 4029869 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  43 42
CXD87_RS19605 NONE
CXD87_RS19600 4028050 .. 4028065 -  -7.6  -2.57132   GCCTGCGCCGAGAAG              CTGTCA AATT TGACAG               GATCTGCCGCGGCCG  50 45
CXD87_RS19595 4027367 .. 4027417 -   -11  -2.50935   ACGCCACCCAGGAAC GCCCGCCCCGCGTGCTGCTGCT CGACGGC AGCGGCAACATGCGCGCCGAGC TGGTCATGACCGCCA  58 248
CXD87_RS19585 NONE
CXD87_RS19580 NONE
        zapD 4024161 .. 4024175 -  -5.6  -3.55071   CCAGACCGGCCCAAA               CTGGCA GTT TGCCGG               GCGCTGCTGAAATAG  54 137
        mdtA 4022842 .. 4022871 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  52 10
        mdtB 4019778 .. 4019800 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  42 16
CXD87_RS19560 NONE
CXD87_RS19555 4014997 .. 4015031 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS19520 4008593 .. 4008622 -  -9.9  -3.16191   CGACACCTTGAGCAA       CGCCGAGCAGCGCA AGG TGCGCGGC-CGCCG       CATCGGCATGATCTT  62 140
CXD87_RS19475 3999214 .. 3999235 - -15.9  -3.91144   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC  91 66
CXD87_RS19250 NONE
        fghA 3958281 .. 3958312 -  -4.3  -4.08706   CGCCCAGTATATAAA      GCGGCCCGGGC CCGGCCTGTT ACCCCAGCCGC       TCGACGTGAAACCGG  62 13
CXD87_RS19240 3957503 .. 3957522 -    -2  -3.53012   CTGCGCCGCGCCAAA            GTTCCGGA ATTT CCCAGTAC             GCAGGATATTTTTCT  48 54
        rpoH 3956471 .. 3956490 - -13.6  -5.40474   AGGCCCCCAAAAAAA            CAGACCGC CGTA GCGGTCTG             TCTTGCATGCGCGGG 100 55
CXD87_RS19225 3952176 .. 3952191 -  -8.2  -3.66666   GCGAAAACCTGGAAA              CCGCGC TGGT GCGCGA               ATGCGGCGAAGAAGC  63 427
        coxB 3950215 .. 3950247 - -13.4  -3.22858   CCAACTACAGGAACA     GCAGCGG-GGCGCGC TTCA GCGCGCCTCCACCAC      GTCCTTGGGTTGGAC  73 8
        ctaD NONE
CXD87_RS19205 NONE
CXD87_RS19200 NONE
CXD87_RS19195 3947156 .. 3947173 - -12.7  -3.33696   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  71 57
CXD87_RS19185 NONE
CXD87_RS19180 NONE
CXD87_RS19175 NONE
CXD87_RS19170 NONE
CXD87_RS19165 3942744 .. 3942770 -  -8.7  -2.87132   TTGGGCGTCCACAGA         TATCGGCCCCC CATGC GGGGACAGATA         CCGTCTTGGCAGTCA  54 137
CXD87_RS19155 3941616 .. 3941631 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CXD87_RS19150 3940759 .. 3940788 -  -2.6  -3.31322   GCGAAGGTTCGATAA       GCGCGACGATTC CAGGGC GTGCCGGCGCGC        TACGGCTTGTCCGCC  44 25
        glmU NONE
CXD87_RS19140 3937865 .. 3937896 - -10.8  -3.04322   TGCAACCTCGCAATA      CGCGGCGTCAGCGGA CCA TCCGCCG-CACTGCG      GGCATTATAGAAGTA  62 87
CXD87_RS19135 NONE
CXD87_RS19130 3935266 .. 3935300 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS19110 3931681 .. 3931691 -  -8.2  -5.15634   CACTCTAGGAAAAAA                 GCGC GGC GCGC                 GAAAATAATTAAAAC  95 203
CXD87_RS19105 3930240 .. 3930271 -  -8.6  -2.56596   TGGGTGACGAAGGGA      TGCGAGGGCCG-CCG TGG CGGCCGGCCCTCATT      CGGAGGTGGCGGTGC  52 21
CXD87_RS19100 NONE
CXD87_RS19095 NONE
CXD87_RS19090 NONE
CXD87_RS19085 NONE
CXD87_RS19080 NONE
CXD87_RS19075 3923405 .. 3923419 - -11.4  -3.90112   TGGCGGCCAAGGAAA               CGCTGG CCA CCAGCG               ACCTCAACACCGAGC  77 391
CXD87_RS19065 NONE
CXD87_RS19060 NONE
CXD87_RS19055 3919618 .. 3919629 -  -2.2  -3.18389   GGAAGATGAAAATCA                CGAA ACAC CTCG                 TTCATGCAGGCCCGG  42 95
CXD87_RS19050 3918735 .. 3918780 - -14.5  -3.70902   CGCGCGAGACCGAAA GCCCGGGTTTCCGGCAGCGCG TCGC CACGCAGCTGGCCACCCAGGC CACCCAGGCCATCCA  88 96
CXD87_RS19040 NONE
CXD87_RS19035 NONE
CXD87_RS19030 NONE
CXD87_RS19025 3913465 .. 3913478 -  -5.2  -3.10611   TTTACCCGAAGAAAC               GGGC CAGCAC GCCC                TGCCGCGGATGTCGG  49 382
CXD87_RS19020 NONE
CXD87_RS19015 NONE
CXD87_RS19010 NONE
CXD87_RS19005 3909704 .. 3909714 -  -8.2  -2.70932   CTCTGTCTGCAATGA                 GGGG GCG CCCC                 GGGTTCAGCGCCCGT  52 30
CXD87_RS19000 3908463 .. 3908478 -    -6  -2.55606   CTATATAGGATGAAT              GGGGTG CCTG CCCCCC               TGGGGACAGATACCG  46 163
CXD87_RS18995 3907297 .. 3907313 - -10.8  -3.19602   CGGGCTACACCAAGA              CGCCGC CCTAC GCGGCG              GGCATCGCCCTGCAG  64 155
CXD87_RS18985 3905026 .. 3905038 -  -3.3  -3.60475   AAGTGTGATCCGAAA                GCGGA CCG CCCAC                TTTGGTTGGGTCGGT  49 498
        trmB NONE
         pip NONE
        thiS NONE
        lysM NONE
CXD87_RS18930 3897589 .. 3897602 -  -5.9  -2.87931   GCCAGGTGCGACAGA               CCGGC GCGG GCCAG                GACGCGGCTGACGGT  48 330
CXD87_RS18910 3893706 .. 3893725 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TTGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CXD87_RS18905 3892643 .. 3892657 -  -2.8  -3.01924   GATTCGCCCGCAAGA               TCCC ACCAATG GGGA               GTTGGGAACGCGTCT  42 101
CXD87_RS18900 3892224 .. 3892256 - -18.5  -5.81412   CGGAGGCAAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTACGGCTGCG 100 63
CXD87_RS18895 3890504 .. 3890532 -  -7.4  -3.53012   GCGCGCTGCTCGAAA       GCGAATCGGC-CC GGCT GGCGGCGATCCGC        GGCACGGACGCCGAC  60 434
CXD87_RS18885 3887726 .. 3887749 -   -21  -2.71364   GCAGCCCGGCAAGCA          GGCGCCCGCC GGCA GGCGGGCGCC           TGGCGGCGTCAGCGC 100 34
CXD87_RS18880 3887048 .. 3887064 - -15.1  -5.53288   TTTAATCGAAAAAAA              CCGGCGC CCG GCGCCGG              ACCATGACTGCGTTC 100 39
CXD87_RS18875 3886765 .. 3886802 - -16.9  -2.65174   AAAATAAGTAATCTA   CCCGGGAGCCTGTCCCC GCAT GGGGACTGGCTCCCGCC    AACTTCAGCCGTCAG  80 104
CXD87_RS18825 3875377 .. 3875403 -  -9.2  -2.52516   CGCGGCACGACGAAG         CCGCCGCCACGC TAG GCCAGGCGCCGG         GGGCGCAGCTGTATC  51 513
        uvrA 3865322 .. 3865356 -  -2.8  -3.01712   GGCCTGGCGGCAAGA    TAGGGGGG--CGGGCG GTTCG CGTCCGTGCCGCCCTA    GTCTAGCGCCGTTTG  42 28
CXD87_RS18775 3864463 .. 3864486 -  -8.9  -3.53012   GGCGGCTGTTCGAAA          TGGGCTGAGG GGCTG CCTC-GCCCA          TGCGGCCTACCCCAA  62 183
CXD87_RS18755 3858719 .. 3858744 -  -2.4  -3.70149   TCGACAGTATCGAAA         GCCAGGCGGAC GATTG GGCCGCA-GGC         CTGGATGTCGATATC  53 331
CXD87_RS18745 NONE
        lysA 3857109 .. 3857138 - -22.3  -3.53012   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 48
CXD87_RS18720 NONE
        hemB NONE
CXD87_RS18695 3846476 .. 3846506 - -15.3  -3.13164   CCCGTAAGCAGTCAA       GCGCGGTGGGCGC GCCAT GCGCCCGCCGCGA       TGTTTTCATGCATCG  78 453
CXD87_RS18595 3835644 .. 3835664 - -15.4  -4.72272   GCCGGCCATGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCCTGAGCCCGG 100 50
CXD87_RS18590 3834617 .. 3834639 - -17.8  -3.72576   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG  93 125
CXD87_RS18505 3822954 .. 3822975 - -15.1  -3.14132   TCTGTTCTTCACCAA           GGCCACGCC TTCG GGCGCGGCC            TAGCTGTGAACTGTC  76 25
CXD87_RS18480 3817371 .. 3817402 -  -2.2  -4.68103   CCAACTGGAACAAAA     GGC-CCGCCACGAC TTCGAG GACGC-GCGGCGCC      AGGCCGTGCAATCGG  76 357
CXD87_RS18440 3806795 .. 3806829 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS18415 3803092 .. 3803141 -  -7.9  -3.91084   GCAGCCTGAAGGAAA CCCGGCTGCCGC-TCACGCC-GCC GCCCG AGCAGGCATGACGCCGC-GCCAGG CCGTTCAGGTCAGCA  68 30
        ilvB 3800601 .. 3800640 -  -4.9  -3.76224   TGGCCAGCGACGAAA CCGCC-TTCATCACC-GGC GCCT GCCTGGAGGTGGATGGCGG  CCGCTGCGTGTAGGC  58 94
CXD87_RS18365 3789010 .. 3789063 -  -9.4  -3.25823   CTGGGGCCACAGCAA CAGGACGT-GGCGGCCGCGGTCGGCG ATTT CGCCCTGCGCCGC-GCCGACGGCCTG TGGGCCTACCAATTG  61 390
CXD87_RS18335 3780509 .. 3780536 -  -8.4  -3.25823   CCTGCCGCACATCAA        GACCGGCAA-GGC CGT GCCGCTGGCGGTC        ACCACCGCCGGCCGG  59 351
CXD87_RS18325 3778460 .. 3778481 -  -4.3  -3.05596   GACGCCGGGACGGAA           GTCCTGCAT CGCC ATGCCGGCC            CCGTCCTTACTTGCG  45 32
CXD87_RS18320 3778202 .. 3778226 - -17.1  -3.20991   TCGAAGTGAAGTGAA          TGACGCCGGGC GCG GCCCGGCGTCG          GGTCAGCCTTGCTCC  84 28
CXD87_RS18290 3769345 .. 3769389 -    -2  -3.17723   GTATTTCGAAGGCAA GCTCAAGCGCCGCACCGATGCC GAC GGCATCG-TGCGTTTCCAG-GC GGCGTAGCGGGCGCG  42 56
CXD87_RS18280 3767798 .. 3767823 - -13.5  -3.38522   GATGCAGTGCAAATA         TTACGTTTACG TAAA CGTAAACGTAA          AGTTGAGTCGGGTTT  75 91
CXD87_RS18235 3758873 .. 3758894 - -11.5  -3.57144   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG  72 95
        rpmH 3753241 .. 3753257 -  -2.1  -2.78384   TCCGCCTGGATTAGA              CGGCCAG ACG CTTGCGG              CCCTTGGCGCGGCGG  38 4
CXD87_RS18210 3752740 .. 3752784 -  -2.8  -4.12902   GAAGTACCGGTAAAA CCGGATCGGGGCGATAAGCAG TCTC CTGATCATCGCGCT-ATCCGT GTGAAGTGAGCATCT  59 10
        yidD NONE
        yidC 3750723 .. 3750742 - -16.4  -5.55664   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC 100 43
CXD87_RS18185 3748161 .. 3748206 - -14.8  -2.78384   CGGCGCCGCAGGACA CGGCCG-AGGTCGCCGGCCGCAA GGC CTGAGGCCGGC--CCTACGGCCG GGCCGTGTCGCTCTG  72 17
CXD87_RS18175 3745510 .. 3745536 -  -7.1  -2.82516   CCCTGTACGACCAGA         GCGCGCCGGCC GACGA GGCCGAGGCGT         TCCGGCGCAGCGGCT  50 68
CXD87_RS18165 3742703 .. 3742735 -  -3.3  -3.28791   ATGTGCGGCCCACAA     GTACGGCGGGATTG AGGCCG CCA-CCCGCCGCGC      CATCGTCCGTGCCGC  47 393
CXD87_RS18075 3733083 .. 3733098 -  -8.2  -3.09273   GCGCGCCAATAGATA              GGCCAC CACA GCGGCC               CCCACCAGGATCAGG  56 199
CXD87_RS18070 3732097 .. 3732121 -   -15   -4.2828   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG  95 52
CXD87_RS18045 3728493 .. 3728508 -    -6  -3.15579   CCAACGCCCCAGCAA              GCGGCG TGCC CGACGC               TCGCGGAAGATCCGC  51 71
CXD87_RS18040 NONE
CXD87_RS18035 3728039 .. 3728055 -  -3.5  -5.00616   TTGCGTTTGAAAAAA              TCGCCTG CGC CCGGCGC              GATGCCGGACAGCGT  81 127
CXD87_RS18030 3720768 .. 3720804 - -11.3  -3.09785   GCATACGCCAATATA    GCCGCAATGCCGGCCGC CGA GCGGCCGGCCCGGCCCC    CGGTCAATACGCCAC  64 29
CXD87_RS18025 3720067 .. 3720082 - -11.8  -5.10461   CGCACGCAAGAAAAA              CGGCCC GCAA GGGCCG               TCTCAAAACGTGGGC 100 118
CXD87_RS18020 NONE
CXD87_RS18015 NONE
CXD87_RS18010 NONE
CXD87_RS18005 NONE
CXD87_RS18000 NONE
CXD87_RS17995 3713953 .. 3713969 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD87_RS17975 NONE
CXD87_RS17970 3710012 .. 3710030 - -10.3  -3.07222   AGGAGCACCTGAAGA             TCCTCGC GGCCT GCGAGGA             AGGCAATGCCGCGCG  59 110
CXD87_RS17950 NONE
        rimO 3704623 .. 3704642 - -11.4  -3.28712   TTGGCTGCGCTACAA            GCGCCACG CCTT CATGGCGC             GCGGCTTGAGCGCCG  66 434
CXD87_RS17935 NONE
CXD87_RS17930 NONE
CXD87_RS17925 NONE
CXD87_RS17920 3701681 .. 3701701 - -11.8  -3.36492   GCTGGAATTGCAGAA            GGCCGGCG GCAAG CGCCAGCC            GGTGGACGTCTTCGT  66 82
CXD87_RS17890 NONE
        dprA NONE
CXD87_RS17880 3694827 .. 3694855 -  -4.3  -3.20723   TGTTCATGAATGGAA        CGGGCGATGCGGC GAG GCCGCGTAGCATG        AGGAGGGCGTATGGG  47 131
CXD87_RS17875 3694094 .. 3694130 -  -2.2  -4.28254   GCTCAAGAGCGAAAA   CCCCAACGT-GCGCCGCA TCC TG-GGCGTGACGCCGGGC   GCCGGCGCCAACCTG  65 237
CXD87_RS17855 3689547 .. 3689572 - -10.3  -3.35679   CGTCGTCACCGAGAA         CGGCGTGGCGC AGAT GCGCCAGGTCG          ACGGCGTGGCCGTGC  63 290
CXD87_RS17840 3687339 .. 3687373 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS17810 3683537 .. 3683551 -  -8.5  -3.14132   CCTGCGCTGGATCAA               CCGCC TGTGC GGCGG               CATGCTGGTCGTGCT  56 123
        rsmB NONE
CXD87_RS17795 NONE
CXD87_RS17790 NONE
CXD87_RS17785 NONE
        trkA NONE
CXD87_RS17775 3674975 .. 3675001 - -11.4  -2.70232   CTGAATAGTACACCA         CCGCGCGGGCAG CGG CCGCGCGCGCCG         CTATTTGCGCCAGAA  62 26
CXD87_RS17770 3673974 .. 3674016 -  -3.2  -3.14344   GACCCGCGCGAGGAA TTCCATGCAGCCTGGCATGC GCC GCACGCCACGCTGGTCGCCA CCATGCCGGACGACA  45 398
CXD87_RS17760 3672476 .. 3672511 -  -2.3  -3.54424   CGGGACGCGCCGAAA    CCCTTGCCATGCGGG ACTTTA CGCGCCCGGCCAGCG     ACCCGCGGCAGTCCG  48 167
CXD87_RS17755 NONE
CXD87_RS17750 3670306 .. 3670352 -  -8.6  -3.53224   CAGCGCGCGCGCAAA CGCCAGCAGGTCCTCGGCCTG CACATC CAGGCCATAGTCCAGCTG-CG GCCCCGACTGCGACA  62 262
CXD87_RS17740 NONE
CXD87_RS17735 3667794 .. 3667805 -  -7.2  -3.68351   GCGTCACCAGCGAAA                CGCC AGAC GGCG                 AGATCGCCGCATCCA  64 278
CXD87_RS17710 NONE
CXD87_RS17705 NONE
CXD87_RS17700 NONE
CXD87_RS17695 NONE
CXD87_RS17690 NONE
CXD87_RS17685 NONE
CXD87_RS17680 NONE
CXD87_RS17675 NONE
CXD87_RS17670 3653585 .. 3653604 - -13.6  -4.52589   TTCCCTTAGATAAAA            CGGGCGTT ACCA AACGCCCG             GCAGGTAACCACTAT 100 37
CXD87_RS17665 3651912 .. 3651926 - -11.4  -3.09635   AGCCTGAGCATCGAA               GTGGCC TAC GGCCAC               GCCTGGCGGGCGCCG  62 125
CXD87_RS17655 NONE
CXD87_RS17650 3649301 .. 3649322 - -10.1  -3.05384   GCTTTCCGCAGGTAA           TCACCGCCA TCAT CGGCGGCGA            CGTGCACGCCGGTTT  59 423
CXD87_RS17620 NONE
CXD87_RS17615 NONE
CXD87_RS17610 NONE
CXD87_RS17605 3641344 .. 3641378 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS17595 3639408 .. 3639444 - -23.8  -2.71693   GAGGAAGGAAAGTCA    GCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGG    GTGGGGGGTTTACAT 100 35
CXD87_RS17580 NONE
CXD87_RS17575 3634716 .. 3634747 -   -15  -2.60075   GCGGGTCGAATGAAG      GCAGCCGCGCCGCC CGAG GGCGGCGCGTTCGC       ATGAGGACGAGGCCC  71 45
CXD87_RS17490 NONE
CXD87_RS17485 NONE
CXD87_RS17480 NONE
CXD87_RS17475 NONE
CXD87_RS17470 NONE
CXD87_RS17465 NONE
CXD87_RS17460 NONE
CXD87_RS17455 NONE
CXD87_RS17450 3607331 .. 3607359 -  -3.7  -3.31726   GGTCGCCACAGAATA       CCTGCGCGCTGG TCCAGG CCGGCGC-CGGG        GTGGCGCTGGTGGAC  47 199
CXD87_RS17440 3605447 .. 3605457 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS17435 3604398 .. 3604408 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS17430 3603326 .. 3603354 - -10.3  -2.57026   TAGAGTGACACCAAT       GC-GCCGGCACGG CAAGC CCG-GCCGGCCGC       TTTCCCCCATCCAGA  57 65
CXD87_RS17395 3596846 .. 3596890 -    -4  -2.87132   GGGTCGGCCGATACA TCGCAGGTA-TTGCCGCCGCG CGGC CGCGGCGTCATCCGCCGGCGG CCCCCGCGCCACGCC  43 12
CXD87_RS17390 NONE
CXD87_RS17385 NONE
CXD87_RS17380 3593508 .. 3593553 -  -8.9  -3.32769   GGCCGAAACCATCAA GGTCGGCATCGCCCTGGCCGTG CAT CCCGAC-AACGCCACGCCGACC ACCGCCAACTTCGTC  59 105
CXD87_RS17370 NONE
CXD87_RS17365 3590259 .. 3590281 - -10.4  -4.69622   AGACAAGGGGAAAAA           TCGCTGCGCC GGC GGCGCGGCGT           GCGGACGACGCTAGG  93 36
CXD87_RS17360 3588810 .. 3588825 -  -2.6  -4.08216   GTATTGCGTGGAAAA              CATG-AG CTA CTACATG              GTGTCGCGCTTCCTG  58 233
CXD87_RS17325 3582865 .. 3582880 -    -6   -3.5774   ATCGAATCGTGGAAA              CCGCTG TTCG CCGCGG               CGCTTTGAGCGGTAA  56 63
CXD87_RS17295 3573545 .. 3573566 -  -5.7  -3.30771   GCACATTCCGTACAA           GGGCAGCGC CGCG GCGCTTACC            GATGTCCTGAGCGGG  51 409
CXD87_RS17270 3570079 .. 3570108 -  -7.7  -3.14132   GCCGGGGTGTACGAA       GAGCTGCTGGGCG TGTG CGGCGAGCGGCTC        GCGGCGCTCAGGCAG  54 33
CXD87_RS17260 NONE
CXD87_RS17255 3567721 .. 3567741 -  -3.1  -2.77192   AAGGCCGGCAAGAAC            GATCTGCAG CAG CCGCTGCTC            TATGGCTCGGTGCTG  39 97
CXD87_RS17230 3560720 .. 3560746 - -23.8  -4.79223   GCACAGCAGGAAAAA         GCGGGTTGCGGC GCT GCCGCAACCCGC         TTTGTGCGTCAGTGA 100 34
CXD87_RS17185 NONE
CXD87_RS17180 3549149 .. 3549186 -  -8.3  -3.28924   CATGGCTGTCTACAA   CGGCGTGGCCTACCTGG CCGG CCAGGTACCCGACGACG    CCTCGCTGGACATGG  59 441
CXD87_RS17165 NONE
CXD87_RS17160 3546493 .. 3546536 -  -3.1  -4.58685   AAATGTTGTGAAAAA GCGA-CCCCCTCATGGC-GGA TTCC CCCTGCCATAGGGGGGATTAC CAGTAGTTTTCGACC  71 22
        phaZ 3545123 .. 3545138 - -11.8   -4.2687   CGTAAAAAGCAGAAA              CGGGCC AGGC GGCCCG               TTGCAGGGAGCGCGC  91 48
        rsxB NONE
         nth 3543735 .. 3543749 -  -3.4  -3.88985   AAAACGCTTCAGAAA               CCAGGG TTT CCACGG               TGTTTCCCACGATGT  56 108
CXD87_RS17140 NONE
CXD87_RS17135 NONE
CXD87_RS17130 3540796 .. 3540806 -  -8.2  -2.52516   TGCCGGATGAGCAAG                 GCCG TGT CGGC                 TTCCTTCAGGAGGTT  51 39
CXD87_RS17125 NONE
CXD87_RS17120 NONE
CXD87_RS17115 NONE
CXD87_RS17110 3536857 .. 3536891 - -30.1  -3.09516   GCGCCCAGGACTGAA     CGCTGGCGGCGCGGC CTGGC GCCGCGCCGCCAGCG     TGCGCGCGGGTCAGC 100 36
        msrB NONE
CXD87_RS17070 NONE
CXD87_RS17065 NONE
CXD87_RS17060 3528418 .. 3528447 - -19.5  -4.13767   CCCGGCAGCCGAAAA       CAAAATTGCCCGC GAAA GCGGGCAATTTTG        TTGATGGCGATGGCT 100 47
        lplT 3519810 .. 3519838 -  -6.5  -3.74747   CCAAGCCCGAGGAAA        TCGCCGCCTGCAG TCC CTACCTGCGGCGC        CAGATTGCCCTGCTG  61 278
        ompR NONE
CXD87_RS17020 NONE
CXD87_RS17015 3515625 .. 3515635 -  -4.6  -3.10677   AATTAAGGCAGGCAA                 GGCC TCA AGCC                 CTAAATTCTACGCTA  47 38
CXD87_RS17010 3515012 .. 3515028 - -10.8  -3.95584   TCTGGAGCAATGAAA              GCCCGG ACGAG CCGGGC              CGGGGAAATTACAGC  79 34
CXD87_RS17005 3514396 .. 3514448 - -15.5  -2.79188   GAGGGAAGGGAATGA GTGCCGG-C-CCCGCGCAGG-GGCCG GCTG CGGCCGCCGGCGGGGGAGGCCGGCGC ACCGCGGGGGGCGCT  75 40
CXD87_RS16995 3511736 .. 3511752 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD87_RS16975 NONE
CXD87_RS16970 3507984 .. 3508010 -  -8.7  -3.53012   CTGCGGTGCGCCAAA        GCGCGC-CGC AGGCCGGG GCGGGCGCGC         CTATTCGAGCTGGAT  62 26
CXD87_RS16965 3506903 .. 3506939 -   -16   -4.2558   GATTGTCCAGGAAAA   CGCGCCAATTCCCGC TTGATTGG GCGGGA-TTGGCGCG    CAATGGGCAGGCGCC  95 41
CXD87_RS16960 3506014 .. 3506024 -  -2.4  -3.01497   GCAGCCGAAAGCATA                 GCCG TTC CCGC                 TCCGGCCGCCTTACT  41 84
CXD87_RS16955 3504580 .. 3504612 -  -3.2  -4.72272   GTTCTCCACGAAAAA     GGGGGCG-GAACCGG AGGG CCGGCGCGCGCCGGC      GGCGTGCGCCGGCCG  75 476
CXD87_RS16945 NONE
        argF 3502275 .. 3502297 -  -6.3  -2.58714   TTTGACAGCAACGGA           CCGTCAAAC AAGAA GTCTAACGG           GGCATTTTAGCGCTT  46 112
        argG 3500851 .. 3500880 - -23.7  -4.08394   ACACCTGCGGCAAAA       GGGTGCCTGTCCC GGCA GGGACAGGCACCC        TCGCGCGGTTGCCGC 100 41
CXD87_RS16870 3487791 .. 3487827 - -20.4  -3.34398   GCGGCGCGGCAAAGA   GAAAGCCCCGG-CAATC ATGC GATTGACCGGGGCTTTC    ATGAAGGCAGGCCAT 100 60
CXD87_RS16860 3486855 .. 3486877 - -12.7  -5.63517   GGCGCAAAGAAAAAA          CCCCGG-CGC TTGC GCGACCGGGG           TTTTTGGGCACATCA 100 65
CXD87_RS16850 NONE
CXD87_RS16845 3483902 .. 3483912 -  -4.6  -2.92371   ATGGAGGCAACCATA                 CCAG ATG CCGG                 TTTACGGCTGGCTGG  44 53
CXD87_RS16840 3482158 .. 3482168 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS16835 3480903 .. 3480935 -  -3.2  -3.05844   TGTTGCACGCCAAGA      CGGCGGTGGTCGAC GGCGT GTGGTCCACGGTCG      GGTCGAGCAACATGG  43 244
        egtD 3477466 .. 3477480 -    -7  -2.71011   ACGGGCGGGTAAGCA               GGCCGC GCT GCGGAC               GTGGGTGGCGGGCGC  48 366
CXD87_RS16810 3476268 .. 3476299 - -20.4  -4.37886   TCATCGCGCACAAAA      CAAAATGCCCGCAA GCGA TTGCGGGCATTTTG       TTTTGAATTCTCTGG 100 38
CXD87_RS16795 3474777 .. 3474817 -  -5.8  -3.58536   AAATTGACGGCCAAA  GCCGCCTCAGTCCCCGCG AATGG CGCGCCGGCCGCGGCGGT  AGACTGGCGCAGCCT  57 309
CXD87_RS16785 3474008 .. 3474063 - -13.9  -4.11216   CCGTTACGGTTAAAA GTCGCCCTGCGCGGCCCTGGCGCCGA ATATG TCCACGATAGGG-CGCGCAGGGCATC AATAGGCAAGACTGG  85 77
CXD87_RS16780 3472512 .. 3472522 -  -8.2  -3.14132   CCGGCCGCTGACGAA                 GCGC GCC GCGC                 TAGTGCTGGCCGGAC  56 25
CXD87_RS16750 3466609 .. 3466628 -  -8.6  -3.68222   TGCGAATCTGAATAA            TGCGAAGC ACGC GCTTCACA             ATATGCATATAGGCA  65 139
CXD87_RS16745 3466272 .. 3466293 -  -3.6  -3.86015   TATTGGGCGGATAAA           GGGCCAGCC CGGAT GGC-GGCCG           CCGGACCGCCGGGAT  57 65
CXD87_RS16740 3465115 .. 3465129 -  -2.7  -2.69151   TGGCTTCAGATACTA               CGGGG CTCAT CGCCG               CACTCCTGGCAGGAA  40 82
CXD87_RS16735 NONE
CXD87_RS16730 NONE
CXD87_RS16725 NONE
CXD87_RS16720 3461231 .. 3461246 -  -7.5  -2.87132   CCCCCCTCGCAGATA              CGGCG CCTTGC CGCCG               GGGCGGCGAGACCGG  52 139
CXD87_RS16715 NONE
        groL 3458978 .. 3459001 - -19.6  -4.86621   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTTGGGAAG 100 87
CXD87_RS16700 NONE
CXD87_RS16695 3454233 .. 3454246 -  -9.5  -3.53012   CGGCGCGCTTGGAAA               CGGCG GCGC CGCCG                CTCAGTCCAGGACGA  64 27
CXD87_RS16690 NONE
        pyrF 3452009 .. 3452044 - -20.4  -2.59748   CACCCTGAGAAGTCA    GCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGG     GGGGTTACGTTCTTA  95 30
CXD87_RS16650 NONE
CXD87_RS16645 NONE
        phnD 3444366 .. 3444403 - -11.3  -3.02511   TGTACTCCTGGAACA   CCATGCCGATGCGCCG GCGCGCG CGGCGCAGCGAC-TGG   CCGCGCACGCGGGCC  62 261
CXD87_RS16630 3443189 .. 3443220 -  -6.7  -3.78329   GTCGAGCAATTGAAA      GGCGCGTTCGAT GTCGGCCGG ATCGAA-GCGCC      GCATCCAGGTATTGA  64 101
        phnE NONE
        phnE 3440950 .. 3440970 -  -3.9  -3.59979   CCCGCCGAGCCGAAA            GCCTAGGAT AGT ACCCAAAGC            TAACCCGGAAATTGA  51 167
        rsmD NONE
CXD87_RS16595 NONE
CXD87_RS16590 3436589 .. 3436613 - -15.7   -3.9941   TGGCCGACAACGAAA          GCGCGCCGG TGACAGG CCGGCGCGC          CGCGAGGGGGGGAGG  91 59
        benE 3435404 .. 3435430 - -12.2  -3.57144   TGCCGGATCCTGAAA         GTGCACCCCGAC ATG GCCGAGGTGCGC         TGGCCGTCGTAGGCC  74 45
CXD87_RS16570 NONE
CXD87_RS16565 3431230 .. 3431246 - -13.7  -4.72272   GCGGCCCACGAAAAA              GCCCTCC AGC GGAGGGC              TTTTTTTCTGAGGCG 100 49
CXD87_RS16555 3428835 .. 3428877 -  -3.3  -3.66874   TCAACCGCATCGAAA CCGACTATGCGCG-GCGC TATCAGGC GCGCGCGCGCGTGCTCAG GCTGACCGACGGCGA  51 504
CXD87_RS16520 3418605 .. 3418619 -    -7  -3.41636   AAGCAAGGCAAGGAA               CGCGAC GAG GGCGCG               CCCGGAACGTCGGCG  56 172
CXD87_RS16515 NONE
CXD87_RS16510 3416487 .. 3416530 - -10.9  -2.57344   CAGTCTTGCGACAAT CGGCACGGCAGTGGGGGCGGC CGGG GCCGCCCGC-CGGGC-TGCCG TCAGTTGAGGTTGAT  59 26
CXD87_RS16505 NONE
CXD87_RS16500 3413918 .. 3413928 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 110
CXD87_RS16495 3412722 .. 3412735 -  -3.7  -2.71791   AGGTCTTGTTGAAAC               GCCGG CCGG CCCGC                TGCAGGAAGGGCCTG  41 204
CXD87_RS16485 3412421 .. 3412449 -  -3.8  -5.55769   GGCTACAAGAAAAAA       GGAAGCACGGCAG GTAA CCGCTA-GCTTCC        CTTTTTGGTGTTTGG  95 38
CXD87_RS16480 3412298 .. 3412317 -  -6.3  -3.94877   ATCCTGGAACAAGAA            GGCTCGC GACGCG GCGGGCC             TTGAAGTGTTTGGAG  64 35
CXD87_RS16475 3411813 .. 3411832 -  -7.1  -3.14468   CGCCATTATAGGCAA            GCGCGCGC GCCGG GC-CGCGC            TACGGCCGGATCACG  52 25
CXD87_RS16470 NONE
CXD87_RS16460 NONE
CXD87_RS16455 3409111 .. 3409123 -  -4.7  -3.54424   TTCGACCGGGGGAAA                CGGCG TGT CGGCG                GCCAGCCAGGGCAGT  52 50
CXD87_RS16445 3407576 .. 3407613 -  -3.2  -3.00923   GTGGAAGAGGATAGA   CATGGGGCGGAATTGT AGATCG ACTTTGCCGCCCCGCG    CGTGCTCAGGGCGGC  42 31
CXD87_RS16440 3406493 .. 3406505 -  -6.2  -4.74103   TGCCCAAGGCAAAAA                GCCC TCTTG GGGC                CCATGCCCGCTCGGG  82 49
CXD87_RS16430 3404362 .. 3404397 -  -8.8  -3.54424   TCGCATTCCGCGAAA    CGG-CGGGCGCGCAGGC CTC GCCCGATCGGCCGGCCG    GGCCGCGCGATGCGC  62 67
CXD87_RS16400 3395507 .. 3395524 - -10.5  -3.21218   ACGCCCGAGCAGGAA             GGGCGCA GCAA CGCGCCC              AAGCGCCAACTGGCA  60 82
CXD87_RS16380 NONE
CXD87_RS16375 NONE
CXD87_RS16370 3391025 .. 3391037 -  -2.6  -3.07816   TCTGGAGGCAGCCAA                CGAG ATCCA CCCG                CCCTTAGTGGAGACG  41 29
CXD87_RS16365 3389618 .. 3389636 -  -6.7  -3.77832   GCGCAAAGCGAAGAA            CGCACCGG CCAC CCGGTG-G             ATGCGCGCCGCAACA  61 313
        galU 3387103 .. 3387121 -  -4.4  -2.71924   CATGGCGCCGCAAAT             GGTGGCCG GCG CGGTCATC             GCCTTTACCGAGCGC  40 299
CXD87_RS16335 3382912 .. 3382938 -  -9.5  -2.62184   CCCGGCGGTACAGCA        GCTGCGCTTCGGC GCC GCCG-AGC-CAGC        CGGCGCGCGCGCCTG  55 143
CXD87_RS16320 3379027 .. 3379041 -  -2.8  -4.09685   CGCCAGCCCCTAAAA               TGCC CCTGTCC GGCA               CGCGCCGCTTTTCCG  59 521
CXD87_RS16310 NONE
        dusB NONE
CXD87_RS16300 NONE
        purH NONE
        ruvC NONE
        ruvA 3373460 .. 3373508 - -10.8  -3.30124   GCTCACGCGCGACAA CGTGGCCAGCGGCGCCGCGCCCTC GGG GTTGGC-C-GCGCCGCCCGCCGCG CTGGAGGCGGTCGCG  66 83
        ruvB 3370117 .. 3370151 - -14.9  -4.84359   CGAGGCCGAGAAAAA    GCCGCGCAGCTCGCGC GCGG GCGCCCGC-GCGCGGC     CCGACCCCATCGACC 100 272
CXD87_RS16255 NONE
CXD87_RS16250 3365992 .. 3366027 -  -9.1  -3.03124   GGCCATGCGTGAACA   TGC--CCAGGCGCGC GCGCAATG GCGCGCCTGGATGCA    GGACTACGATGCGTT  55 336
CXD87_RS16235 NONE
CXD87_RS16230 NONE
CXD87_RS16225 NONE
CXD87_RS16220 3360926 .. 3360969 -   -21  -3.53091   AGCCTGGCGGGCAAA GTCAGCGGGTGCCTGTCCCC CTGC GGGGACAGGCACCCGGGGAT CAGTCTATCTTGTAG 100 25
CXD87_RS16215 NONE
CXD87_RS16210 3358361 .. 3358374 -  -2.4  -4.10144   TGAAGACAACAAGAA               CGAT CCGCGC ATCG                CGCGCTTTATCAAGG  58 151
CXD87_RS16200 3356380 .. 3356390 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS16195 3354863 .. 3354889 -  -5.9  -4.14243   CACTCCAGCGCAAAA        CCAACA-GTGCC CTGG GGCACGTGTTGC         AGAGACCCCACTCTA  66 512
CXD87_RS16165 3351084 .. 3351097 -  -5.9  -6.06723   GGGGCGAAAAAAAAA               CCGCC CGAA AGCGG                TTGATCAATCCTGTG 100 468
CXD87_RS16160 NONE
CXD87_RS16155 NONE
CXD87_RS16150 3347671 .. 3347705 -  -2.6  -2.74012   TCAGCAGCGCAATGA     TCCGGCGCACCACCCC GTT GCTGTAGCGCACCAGG     TCGATGGCGTGCCGA  38 50
CXD87_RS16145 NONE
CXD87_RS16140 3346322 .. 3346346 - -15.7  -4.67038   GCCCCAAAAGCAAAA          GCCCCACTGGC TCG GCCAGCAGGGC          TTAGAAAGAAGAAGG 100 77
CXD87_RS16135 3345494 .. 3345512 -  -3.9  -3.28924   GATGGCTTGGTAGAA            CGA-TTCC TGGA GGAAGTCG             CCTTCGAAGCCGGCC  47 186
CXD87_RS16120 NONE
CXD87_RS16115 3343333 .. 3343350 - -10.5  -3.65351   GCAGGCTGACGGAAA             CCCCCGC GTGA GCAGGGG              CAACCGTCAATCGGC  70 43
CXD87_RS16110 NONE
CXD87_RS16105 NONE
CXD87_RS16100 NONE
CXD87_RS16095 NONE
CXD87_RS16090 NONE
CXD87_RS16085 3340847 .. 3340860 -  -9.5  -5.46657   GAGGGCAATAAAAAA               CCGCC ATGT GGCGG                GTTCCAGTTGCGCCC 100 69
CXD87_RS16080 NONE
CXD87_RS16075 NONE
CXD87_RS16070 NONE
CXD87_RS16065 NONE
CXD87_RS16060 3336449 .. 3336469 -  -3.1  -5.32944   CGGATAATGAAAAAA            TGCCGCGAC GAG ATCCCGGCG            TTCGGGATTACTCAT  89 33
CXD87_RS16055 NONE
CXD87_RS16050 NONE
CXD87_RS16045 NONE
CXD87_RS16040 NONE
CXD87_RS16035 3330925 .. 3330937 -  -6.2  -5.80817   CTCAACACAAAAAAA                GCCC CCTAT GGGC                CCGTTCATTCATTGG 100 30
CXD87_RS16030 NONE
CXD87_RS16025 NONE
CXD87_RS16020 NONE
CXD87_RS16015 NONE
CXD87_RS16010 3328134 .. 3328154 -  -9.7  -3.54741   GAGCAGCTGGTGAAA            GCCAGCC GCTTTCA GGCTGGC            GACCGCGTGCTGTTC  64 405
CXD87_RS15995 3327493 .. 3327503 -  -8.2  -2.78216   CATCGTCACGAACGA                 CGCC CTG GGCG                 GCATGGTCGACGTGC  52 235
CXD87_RS15970 3323603 .. 3323621 -    -3  -2.65264   TCACGATCGATAGGA             GCCCTG TGGCTGC CGGGGC             GGGCTGGCGCCCGCC  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB 3319669 .. 3319688 -  -2.8  -2.54325   CCTTTGCAAAGAGAG            TCACACGT GTTA ACGGGTAA             AAGGGCCCCACGTTG  39 15
         pal 3319089 .. 3319118 - -21.5  -4.54727   GGTCTGAAACGAAAA       CGTCGGGACGGCC GGAT GACCGTCCCGACG        CGTGGTGGGGCTGCT 100 56
        ybgF NONE
CXD87_RS15930 NONE
CXD87_RS15925 3316411 .. 3316438 - -10.5  -4.15453   GAAGTCAGCGGAAAA        CGCGCCGCGGCC GGGCT GGCGGCGG-GCG        AGGTGCTCATCCTAT  78 120
CXD87_RS15920 NONE
CXD87_RS15915 3315030 .. 3315041 -  -2.2  -3.21099   GGGCGTGACCAGGAA                GC-CG TGG CGCGC                GTAGTGCAGGGCCGG  42 465
CXD87_RS15905 NONE
CXD87_RS15900 3312872 .. 3312926 -  -2.5  -2.70932   CCTGTTCTGGAAGCA TCTGGGCCACG-CCGGCGCCAACACC TTGC GGGCCTGGGGCCGGGCCTGGACCGGC GGGCTGCTGGCGCGC  38 500
CXD87_RS15890 3309748 .. 3309762 -  -4.2  -3.64703   TCGCGCTGACCGAAA               GCGG GCACACG CCGC               TGATCATGTCGCGCA  51 297
CXD87_RS15880 3307252 .. 3307264 -  -9.1  -2.52464   GCGTGGCGCAATTCA                TCGGC CTG GCCGA                CGCCTTGCTGGCGGC  51 100
CXD87_RS15860 NONE
CXD87_RS15855 3300567 .. 3300583 -  -2.2  -3.53012   TGTCTTCGGGCCAAA              GTGGTA GAGGA TACCGC              GTTGCAGCCTCCTTG  48 94
CXD87_RS15850 3299425 .. 3299444 - -16.4  -3.15147   GTCAAGCAATAGACA            GGGCGGCG CGTC CGCCGCCC             ATGCCGGCTGGCGGA  81 388
CXD87_RS15825 3295936 .. 3295950 -  -3.4  -4.07687   ACCGGGCGGCGAAAA               CGCCGG TTT CCGAGG               CCGACGCCAAGCGCG  60 247
CXD87_RS15790 3286694 .. 3286708 -  -2.1  -3.84406   CGCCTACCAGAAGAA               GATCG GCCCG CAATC               GTCGCTGCGCGAGCG  56 430
        nspC 3283764 .. 3283783 -  -4.2  -3.18366   GCTTCAATCAACAGA            GCCAGTTCC TCA GGA-CAGGC            TGTCTACGTAATCCT  45 15
CXD87_RS15770 3282370 .. 3282380 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 119
CXD87_RS15765 3281235 .. 3281261 - -10.1  -3.06133   GAATGTTCGATTGAA         GCGGTAGCCGT ACGAA ACGGCCACAGC         GTTGCGCTGCCGGCA  60 130
CXD87_RS15760 3280511 .. 3280554 -  -2.8  -3.91897   CGGGTCACGTACAAA TGGTAGGGAACGCGGCCGGC GTCA GCGCGCCGCTTCCGCGACCG CCTCGATGGTGATGC  58 3
CXD87_RS15745 3275840 .. 3275856 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD87_RS15720 NONE
CXD87_RS15715 3270098 .. 3270126 -  -7.9  -3.07113   TACTACCTGATGGAA        CCGGGCAGTGGCG AAG CGCCGCCGCGCGC        GCTGCCGCCGTGGCC  52 295
CXD87_RS15705 3268470 .. 3268504 -  -8.5  -3.06183   TGCATCGGCACGGAA     TTGCGCGCGGTCC TGCCGGTAT GGTCGGCGCGCAA     GCAATGGCTGGCCGA  55 501
CXD87_RS15680 3264050 .. 3264070 -  -8.2  -3.12999   GTATCCGACAGGTAA            GGGAGCCG GCCGG CGGCTCGC            ACACTCATACCCGGC  56 101
CXD87_RS15675 NONE
CXD87_RS15670 3262835 .. 3262860 - -13.3  -5.15969   CGCGAACGCAAAAAA         GCCGACACCAC GTTT GCGGTATCGGC          TTTCGCTATGCGCCC 100 108
CXD87_RS15660 NONE
CXD87_RS15655 NONE
CXD87_RS15650 3256204 .. 3256238 - -13.5  -2.99947   GAATCTTCACAGATA    GCC-GGCCTCGCCGGC CGGC GCCGCCGATGCCAGGC     GTGCGGCGCCCAATG  70 152
CXD87_RS15640 NONE
CXD87_RS15635 3252661 .. 3252676 -  -7.5  -3.14211   ACTGCGCGCGAGCAA              CGGCG GATACG CGCCG               CGAGGCCGGGGCACC  54 62
CXD87_RS15625 3251691 .. 3251712 -  -2.1  -3.07291   AAGTAGTCGATTGAA           CGGATTCGC ACCG ACGCAACCG            GTGTGTAGCGCTCAG  41 161
CXD87_RS15620 3246498 .. 3246526 -   -11  -3.31779   AAGAACGCAAAGAGA       CGGCGCCGCCGCGC GAG GCA-GGCGG-GCCG       TGATTCACGGCGCTT  66 40
CXD87_RS15615 NONE
CXD87_RS15610 NONE
CXD87_RS15605 3241554 .. 3241578 -  -2.7  -3.59979   GCCGGTTATGCGAAA          TCTGCATAACG CGG CGATTTGCAGG          GTTACTCCTTAGGCG  49 27
CXD87_RS15600 NONE
CXD87_RS15595 3239482 .. 3239498 -  -6.5  -3.54424   CGCCATCCGGGGAAA              GGGCG AACAGCA CGCCC              CAGTTCCATTGATAT  56 129
CXD87_RS15585 NONE
CXD87_RS15580 3237289 .. 3237305 -  -7.9    -3.273   GTAGAAAAGGGAAGA              CATGCGG CTA CCGCCTG              AGTATTGGATAACGG  56 41
CXD87_RS15575 3235946 .. 3235959 -  -2.3  -3.44848   GGGCTTCACCAAACA               GGACG TCCA CGTCT                TCTACGTCAACAGCG  47 497
CXD87_RS15550 3231309 .. 3231328 -   -15  -3.14564   CCATGGCGGGAGCAA            CAGGCGGC CGGC GCCGCCTG             GGGCTTGCTCGCCGG  76 151
CXD87_RS15545 3229940 .. 3229958 - -10.2  -3.04461   GACCCAGGCCGAACA             CGCCGCGA TCC TCGCCGCG             CTGCGCGCCGGCGAC  59 182
        pepN 3214237 .. 3214249 -  -3.3  -2.74192   TACGTTTCAAGAGTA                GCTCC TAA GCAGC                CAGATCCAAGGCTTT  40 17
CXD87_RS15475 3213012 .. 3213046 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS15450 NONE
        serB 3206489 .. 3206511 -  -6.1  -3.16039   AAGCAGCCGGAGTAA           GGCGCGCGG GCCGG CCGGGCGGC           GGGAGGCCGTCGCGA  51 131
CXD87_RS15435 NONE
CXD87_RS15430 NONE
CXD87_RS15425 3201330 .. 3201346 -    -3  -4.11484   GGCAAGTGCTGAAAA             CAG-ACC GGCT GGTGCTG              GAGCCGCAATCGATG  61 509
CXD87_RS15325 NONE
CXD87_RS15320 NONE
CXD87_RS15315 NONE
CXD87_RS15310 NONE
CXD87_RS15305 3177115 .. 3177131 -  -2.1  -3.05384   GTGGCCGTCACCGAA              TGGGCGC TGC GCGTCAA              CGCGCGAGCATGAGC  41 22
CXD87_RS15265 3169825 .. 3169858 -  -6.9  -3.09516   CTTTTCATGACGCAA     CCTAATTATCAAAGA ATAT TCTTGGATAATTAGT      CAAAGCGAGATTACC  52 108
CXD87_RS15260 NONE
        mexI NONE
CXD87_RS15250 NONE
CXD87_RS15245 3163185 .. 3163195 -  -3.2  -3.28712   CGCGGGCCTGGACAA                 CCAG TAC CTGA                 AGGCCGGCGATACGC  47 239
CXD87_RS15230 NONE
CXD87_RS15225 NONE
CXD87_RS15220 NONE
CXD87_RS15215 3155203 .. 3155254 - -12.9  -2.53876   GCCTACCTGAAGGGA GGCACCGCGGCGC-TGGGCGCGGA CCGGC TGCGCGGCGACGCGCCGCAGTTCC TGACCGAGGCGATCG  62 232
        lrhA NONE
CXD87_RS15185 3147707 .. 3147725 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 303
CXD87_RS15150 3138696 .. 3138733 -   -12  -3.05816   GGAGCGCTCATGGAA   GCAGCGCCTCGAACAGC TGCAC GC-GTTCGCGTCGCTGC   GGCAGGCTACCCAGT  66 470
CXD87_RS15120 3133211 .. 3133221 -  -4.6  -4.07568   CGGGCCTGGGGAAAA                 CAGC GGT GCCG                 TTTGATGGTGCACCC  62 31
CXD87_RS15115 3132108 .. 3132147 -  -2.8  -3.90291   AGCTGGTCAACGAAA  GCGATATCGAGCATG-CCA TCG TGGTCCTGCTGGAAATCGA  GAAGACCGTGGTCGA  56 434
CXD87_RS15105 3130014 .. 3130024 -  -4.6  -3.36327   CCAGCGCATCTACAA                 CGCG GCG CGCA                 ATGTCGAGGCGGCCG  49 255
CXD87_RS15080 3125568 .. 3125582 -  -2.1  -2.50816   TGGTCATCTACGAAT              GGATCC TGCA GGA-CC               TCGGCCGCTGGGGCT  37 520
CXD87_RS15050 3119208 .. 3119219 -  -7.2  -2.52623   GCTGGCCGAGAACAT                CGCC TACG GGCG                 GCCCGGGGCCACGCA  48 497
CXD87_RS15040 3116787 .. 3116803 - -11.5  -2.77013   GATGTCGGTAACAAG              GCGCAGC ATC GCCGCGC              TCAGCCCAGGCGTTC  62 26
CXD87_RS15035 NONE
CXD87_RS15030 3116277 .. 3116296 -  -4.2  -4.00042   GTGCGCAGCAAATAA            GGCCGCGCG GTT CA-ACGGCC            GGTATCGGGGTAGTC  59 17
CXD87_RS15020 3114244 .. 3114258 -  -7.1  -2.70932   GCCGGCGCTGAACTA               CCGCT TCGAC AGCGG               CAGCACGCTGACCTT  49 365
CXD87_RS15005 3111335 .. 3111363 - -16.9  -5.53288   CCGAAGCGAAAAAAA        TCCCATGCAAATC AGT GATCTGCATGGGA        TTTCCGGTCTGGCCG 100 59
CXD87_RS15000 3108167 .. 3108225 - -29.8  -3.25072   GGGAGGAGAACGGAA TG-GGCGCGGCCATCCGGCCGCCCGCGGC TTGC GCCGCGG-CGGCCGGATGGCCG-GCTTCA GGACAGGGGATGAAA 100 49
CXD87_RS14995 NONE
        accB NONE
CXD87_RS14985 3104662 .. 3104682 -  -3.9  -2.93853   CCGTGGCAACGAAAC            CGGGACC GGTTCAG GGTCGCG            TGAACGAAATGTGTT  43 15
CXD87_RS14980 NONE
CXD87_RS14975 NONE
CXD87_RS14970 NONE
CXD87_RS14965 NONE
        accC NONE
CXD87_RS14950 NONE
CXD87_RS14945 3097589 .. 3097607 -  -6.7  -4.11216   CCGTTACTTGCAAAA            CGCG-TGC GGCT GCAACGCG             CGACGTCGGCGGGTG  67 137
CXD87_RS14940 3097252 .. 3097267 -  -3.2  -3.10775   ACGCGCATGCAAAAG              GCGC TCCAGGTG GCGC               AACCGCGACGATAAC  44 105
CXD87_RS14935 3096029 .. 3096041 -  -6.3  -2.88544   GTCCACTCCTACACA                TTTGG TAG CCAAA                TTGTAAAGGATTTCG  48 93
CXD87_RS14930 3095764 .. 3095785 - -17.3  -3.84451   CGGGCGAAATGCAAA           CGGGCAGCC TGCC GGCTGCCCG            TCGCGCGCCCCTCAA  95 37
CXD87_RS14925 3095294 .. 3095304 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CXD87_RS14920 3094196 .. 3094232 - -15.7  -3.14132   CGGCCCGTGCAGGAA    CGGCCGCCTGACGGCCT TGC AGGTCGACGAGCGGCCG    GATGCCGGTGGCATG  77 82
CXD87_RS14905 NONE
CXD87_RS14900 3090046 .. 3090058 -  -9.1  -3.17075   CGGCGGCTAAGCGAA                TCCGG CCA CCGGA                TGCGGCGCATAGGCC  59 4
CXD87_RS14885 3087489 .. 3087522 -  -5.8  -3.62046   CGACTTCCTGAACAA     CATGCGCCCCAGCG ACGGCG CGCCCGCGCGCGTG      CAGCAGCCCGGGCAG  57 255
CXD87_RS14860 3080835 .. 3080845 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS14855 3079513 .. 3079564 -  -9.2  -3.21099   GCCGCTGATCAGGAA CGGCGACCTGCGCGCGCTGGCCG TCACGAG CCGCAAGCGCTCGCCGG-CGCTG CCCGACGTTCCGGCC  56 292
CXD87_RS14845 3077580 .. 3077611 - -11.6  -2.81133   GACGCACCCAGCAGA      GAGCCCCGAC-TGGA CAA TCCGTATCGGGGCTC      TCGTTTGCGTGGGTA  63 238
CXD87_RS14835 3075784 .. 3075809 - -18.3  -4.55798   GAGGGGAAATGAAAA         GCCCCGCGCAA CACC TCGCGCGGGGC          AAAATAGTTTGTTAA 100 291
        gyrA NONE
        serC NONE
        pheA 3066251 .. 3066302 -  -4.5  -4.84761   ATACCTGCAGAAAAA CAATATGGCAG-CGCCG-GACGGA CACACGC TCCGTCACGGCGGCCGCC-TGGTG TGCGTCAACCACGCC  82 47
CXD87_RS14780 NONE
        aroA 3063994 .. 3064007 -  -3.1   -3.6692   GCGGATGCGAAAATA               GCCATG GGG CA-GGC               GCCGTTCAGTCCCGC  53 31
CXD87_RS14770 3063315 .. 3063325 -  -6.8  -3.91984   ATACTGCCGAAACAA                 CACG CGC CGTG                 GCTAGGCGCACCAGA  66 27
CXD87_RS14765 NONE
CXD87_RS14760 3060992 .. 3061021 - -16.6  -5.00616   GCCGGCCCGAAAAAA       CAAAGCCCCTTG AACAAG CAAGGGGCTTTG        CCGGTAGAACACCAA 100 67
CXD87_RS14755 3060509 .. 3060523 -  -3.4  -3.56092   CCACCAGGGTTCAAA               GTCCAC AGC GCGGGC               TCTCGGTAGGAAGTA  49 59
        lapB NONE
       rfaE1 NONE
        rfaD 3057339 .. 3057363 -  -4.2  -3.40597   CGGTGCACGCAAACA         TCCACCCGGGC AATT ACCCGGG-GCA          AATCCGCTACTTCAG  49 32
CXD87_RS14735 3056706 .. 3056716 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS14730 3055636 .. 3055658 - -14.1  -3.78934   TGCCGCCGATAATAA           CCGCCCCGG ATCGG CCGAGGCGG           TTTAGCCGCGCTGGC  83 69
        cysM 3054325 .. 3054374 -   -17  -3.01712   CTTCCTGGTCGAACA TGGCTGGCAGCGCGGCCTGC-CG GTGTT CGCGCCGGTCGCGCTGCCGGCCG ATCCGGCGCCGCTGG  82 361
CXD87_RS14715 3052527 .. 3052542 -  -7.5  -3.08006   AAATAACAATAATTA              CCCGG CGAAAC CCGGG               ACCGCATTGCACAAT  54 53
CXD87_RS14710 NONE
CXD87_RS14705 3050774 .. 3050793 - -16.4  -5.75945   ATGGCCGAAAAAAAA            CCGCGGGC GACA GCCCGCGG             CTTTCTCTCTGCGTG 100 52
CXD87_RS14700 NONE
CXD87_RS14695 3047990 .. 3048005 - -11.8  -5.86332   CCAAGGCAAAAAAAA              CGCCCC TTGC GGGGCG               TTCTCGCCGAAGCGG 100 46
CXD87_RS14690 3046716 .. 3046732 - -11.5   -3.5944   ATCGAGATGCCGAAA              CCCGGCA ATA CGCCGGG              GCGCTGGCGCCGCGC  72 95
        cysA 3043629 .. 3043662 -  -5.1  -2.71712   GTCGGGCCGGTAAAC     CGTGATGG-CGCGCCC GTA GCGCGTGGCCACCGCG     TCCAGCACGCCGAGG  45 264
        cysD 3041879 .. 3041890 -  -3.6  -3.90048   GGGTGTCGAAAAATA                GCGG TAGG CCAC                 ATCGATGGTGATGCC  59 330
CXD87_RS14655 3039358 .. 3039378 -  -4.5   -3.6215   CGAATGCATGTCAAA            CCACTGCCG CGA CGGGCGCGG            CCCCCTACCACTGGC  52 80
CXD87_RS14650 3038823 .. 3038838 -  -4.6  -4.62069   CTGCTACGGGAAAAA              GTAGGC ATAG GCCGAC               TGGCTGGCTGCCTGG  75 86
CXD87_RS14640 3037226 .. 3037277 - -22.6  -2.87132   GCTTTCTTCCAGATA TCTTTTCGCAATAAAAGGACACCC TTGC GGGTGCCCTTTTATTGCGGAAAGC CGTGCCAGACACAAA 100 81
CXD87_RS14635 3036345 .. 3036362 - -14.1  -5.14563   GCCGGGATGAAAAAA             GGCGCGC CACG GCGCGCC              GTACTGATCGGGAAT 100 60
CXD87_RS14625 3033960 .. 3033978 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 244
CXD87_RS14605 3030095 .. 3030127 -  -3.4  -3.80733   GGCAGGCCAGAATAA      CCCGGCGTTT TTAAATTTGCGTT AATCGCCGGG      CCGGCGGCGGCCGCT  56 69
CXD87_RS14590 NONE
CXD87_RS14585 3023785 .. 3023815 - -25.6  -3.55444   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 46
        aceE NONE
        aceF NONE
        lpdA 3010635 .. 3010658 - -18.2  -2.52464   CGCCGCGCCAACGCA          CAAGGGCCCC GCGA GGGGCCCTTG           TGCTGCCATGCCGCG  85 45
         tkt NONE
         gap 3004122 .. 3004164 - -21.4  -4.07568   GCCTGCCTGCGAAAA GGGCCAGATCCGTTTCCCCG TGA CGGGAAAACCAACCTGGCCC TTGCGCCCTGTTCAG 100 51
         pgk 3002662 .. 3002677 -    -6  -3.01712   CCGGGCCGCTCAAGA              CCCGCG CCGC CTCGGG               CATCACCGGCTTCGA  48 227
CXD87_RS14465 NONE
CXD87_RS14460 2992723 .. 2992739 -  -2.1  -3.01712   CCGGGCGCGTCAATA              GGCTTGC TGC GCATGGC              ATGGGTAGCAAGAGA  41 68
CXD87_RS14455 2991327 .. 2991361 -  -6.3  -3.64487   CGACACGGCCAAGAA    GGTCGCGCGGCTGGAA GGCC TGCCGG-CGCGCGAGC     GCGCCGACTTGCAGC  59 456
CXD87_RS14445 2989436 .. 2989461 -  -3.9   -4.7416   TGAAAATCTGAAAAA         CGGCGCGC-CCA CTA TAGCGCACGCCC         TATTGCCGGGCGGCG  77 25
CXD87_RS14440 NONE
CXD87_RS14435 2987966 .. 2987976 -  -8.2  -3.02511   CCGACCGGCTGAACA                 GCGC CCG GCGC                 GCGTTCGGCCTCGGC  55 264
CXD87_RS14420 2985951 .. 2985975 -  -7.8  -3.93369   TGAACCTCAAGGAAA          TCGGCGCCGT GCTCA ACGTCACCGA          GGCGCGCGTGTGCCA  67 436
        flhD NONE
        flhC 2983917 .. 2983957 -  -4.6   -2.7386   AACCGACGCCAATGA TCCCCCCTGACCCGTCG GGCAAAAA CG-CGGGTTATGGGGGG  TTTTCTGGTGCTTTT  43 64
        motA NONE
        motB NONE
CXD87_RS14390 NONE
        cheA NONE
        cheW 2979011 .. 2979033 - -12.7  -3.90856   AAGCGTTGAACGAAA          CGACGGGCGG CGCA CCGCCCG-CG           GACTGACCGCCGTCA  82 38
CXD87_RS14375 2976915 .. 2976950 -  -7.5  -2.82516   CGGCGCAGCACCACA    CCGATACCGGCCCGCC GCGCT GGCGCGC-GAAATCGG    CCAGGATGGGAAAGT  52 341
CXD87_RS14365 2975317 .. 2975356 -  -2.1  -4.43909   ACTCCAAGAAAATAA TGTCCGGACGC-CCGCTCC GTTG GGACCGGGGCGTC-AAACG  CGATGCCCGCGGTCG  67 19
        cheY NONE
        cheZ 2974068 .. 2974086 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 206
CXD87_RS14330 2971084 .. 2971107 -  -6.6  -3.68351   TGCGCACCATGGAAA          CGGCGCGCCCC ATG GTGGC-CGCCA          CCAACACCGGCATCA  61 231
        dacB NONE
CXD87_RS14260 2955451 .. 2955465 - -11.4  -6.34424   GCGGCAAAAAAAAAA               CCGCCT GCA AGGCGG               TTTTCCTGTGGGCGG 100 59
CXD87_RS14255 2954071 .. 2954095 -  -3.4  -3.34398   GTCGTGCGCGAAACA         CGCG-CCGGTC CTGT GCCCGGTCCCG          CCCCGCAGGCCAGGG  46 77
CXD87_RS14250 2951021 .. 2951035 -  -2.7   -4.2679   CAAGCTCCAGGAAAA               CCTCC TCCGC GGGGG               ATAGACCCTCCTCGC  63 42
CXD87_RS14240 2948544 .. 2948587 -  -8.6  -2.66316   GCGTTCATCATACCA GCCGCGCCCCGCGCCACGCA CCCC CGCGTGCTACGGGGTGCTAC TTCAATTGCGTAATC  52 22
CXD87_RS14235 2948137 .. 2948189 -  -7.4  -3.66999   ACCGATCTACGCAAA CCCATTGTGCATGCCGGGGCGGAC GCGCG GCCCGCCCCGCCGTGATCAGCGGC GGCTGATCAGCAGGC  63 18
CXD87_RS14230 NONE
CXD87_RS14225 2947225 .. 2947246 -    -5   -3.7282   GGACGCCACCAACAA           GTGGCCGG GCGAAA CCAGCCGC            GAATGGGGCACGCCC  58 146
CXD87_RS14215 2944449 .. 2944469 -  -3.1   -4.4017   CCAAGGTCGAGAAAA            TGGCCGCCA GCC TGGCGATCT            GCGCGCCCACGCTGG  68 422
CXD87_RS14200 2942682 .. 2942698 -  -4.4  -3.27704   AGCTGCGAAAGTGAA             CGATGCG GCAG CGCA-CG              CCGGAAAGATGCTAC  49 89
CXD87_RS14195 2940085 .. 2940099 -  -3.4  -2.62184   CGGCCCGGTACACCA               TGCCGG TCT CCAGCG               AGGCCCACAGCCGCC  39 283
CXD87_RS14185 2938456 .. 2938490 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 221
         ppx 2929400 .. 2929434 - -21.4  -2.52464   GCTCCCCGGAAGTCA     GCGGGAGCCAGTCCCC TTC GGGGACAGGCTCCCGG     AGATCGGGTTTCAGG 100 36
CXD87_RS14115 2922572 .. 2922597 - -10.3  -3.53012   GCGGCCCGCCTGAAA         CCGGCGGGCCC GTCC AGGCCGGCCAG          ATCAAGTACTATCGC  67 34
CXD87_RS14110 2921096 .. 2921110 -  -5.6  -3.02144   CCAGGCCGCGCAACA               TGGGCC CCA GGCTCA               TGCCCTGCGCGTCGG  47 419
        dusA 2917518 .. 2917552 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS14065 NONE
CXD87_RS14060 2913014 .. 2913024 -  -3.2   -3.7614   AATCAGGACGAACAA                 CTGA CTT CCAG                 CCCAGCTGCCCAGTC  56 2
CXD87_RS14055 2911952 .. 2911983 -  -9.4  -3.03243   ACGGATCTTCGAAGA      GCATTAC-CGGCGGG CCG CCCACCGCGAAACGC      CCGGCAGCGGACTGG  55 174
CXD87_RS14045 NONE
CXD87_RS14040 2907135 .. 2907157 -  -5.5  -3.72324   CACCTCCAGGAAGAA          CAGGGCGTCC ATCA GGCCGCC-TG           CGCCGCCAGCCGGCG  57 14
CXD87_RS14035 2906035 .. 2906054 -  -6.4  -3.73775   CCCAGGCCCATGAAA            GCC-GCCTG CCC CAGGCTGAC            CAGCCCGGTATAGCC  59 239
CXD87_RS14025 NONE
CXD87_RS14020 2903433 .. 2903447 -  -3.5  -2.78384   GCGCGCGTCATGACA              GCCAGC GCTT GC-GGC               GCTTGTAGTGCTTGA  41 3
CXD87_RS14015 2901517 .. 2901538 -  -2.9  -3.12351   GCGCTGGATACGCAA           CGCCGGACCG CGC CGGTACG-CA           CCGCCACCTGCCTGC  44 50
CXD87_RS14010 2900336 .. 2900373 -  -7.6  -2.73364   GGTCGAGGCCAAGGA   CGCCGGCGACGAAGAA GCCATG TACTTCGACGCCGACT    ACATCCGCGCGCTCG  49 504
CXD87_RS13975 NONE
        lolD NONE
CXD87_RS13965 2891465 .. 2891496 -  -4.2  -3.78775   GCGGGCAGGAGGAAA      CAGGGGCCCGG-CGC CGG ACGGCCGGGCGTCAG      GGCGTCGCCGCCCTG  57 22
CXD87_RS13960 2887873 .. 2887897 - -12.8  -6.34424   GCGGCAAAAAAAAAA          CCGCCAGTCG ATACA CGACAGGCGG          CCAACAACGGGCGGA 100 109
CXD87_RS13955 2887356 .. 2887374 -  -3.8  -3.60762   GAGTGGCCAAAAAAG             GCGAAGTC GCT GACTTGAC             GAGGATTTCGCCTAC  51 187
CXD87_RS13950 2883280 .. 2883308 -  -9.4  -2.87132   CCTGCTCGCCAGACA        GTGGGAGGCGCC CCATC GGCGCCCCCCGT        CTTACGGCGCTTAGT  56 36
CXD87_RS13940 NONE
CXD87_RS13935 2878613 .. 2878627 -  -2.7  -3.02263   AGAGGTCCTGCAAGA               CCTCG GGTAG CGCGG               CTTCGCCGCGCTCCG  42 53
CXD87_RS13930 2877699 .. 2877722 -    -8  -3.09015   TGCATAGGGATTCAA          GGGCAGCCGG GGCG CCAACGGCCC           GGCGCGAAAGGCGCG  54 43
        greB 2876868 .. 2876902 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 241
CXD87_RS13895 2869468 .. 2869486 -  -5.2  -4.42081   AACATAAAGGGAAAA             CCCGCAAT TTT ACTGCGGC             CCGCTTCCCTGCCTG  72 16
CXD87_RS13885 NONE
        odhB 2862847 .. 2862903 - -12.9  -3.74693   CCGGATTCGACGAAA CCGGCAGGGCCGCC--GGGC-GGGCCGC GATG GCGGCCCGGCCCTTGGCGGCAGCGACAG AAGAAGGCATTCTTC  79 58
        lpdA NONE
        zapE 2859985 .. 2860001 -  -3.5  -3.14132   GGCCTGCCGGAGGAA              GTCGCCG CCA CGGTGGC              CTTCCTGGCTTCCGA  45 114
CXD87_RS13860 2858129 .. 2858163 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS13825 2852588 .. 2852616 - -19.6  -2.53876   GCTGATCGCAACGCA       GGCGCCGC-CCCG TCAT CGGGTGCGGCGCC        TGCGTCGTTGCCCCG  93 67
CXD87_RS13815 2847925 .. 2847943 - -11.6  -3.91911   CGCAGTCCAAGGAAA             GCCCGGCC CCA GGCCGGGT             TTTCCTTTTGCGCGG  81 44
CXD87_RS13805 NONE
        pgeF NONE
        phaC 2843521 .. 2843540 -  -4.8  -3.61894   AACGCCCGCCAAGAA            TGCCGGCC TTGC GGCCCGCG             CGCGTACTCAAACCG  52 33
        phbB 2842696 .. 2842724 -  -9.6  -3.04263   ATTTTACGTGTAATA       CCGGGCGTCCG CTTCCCCC CGGAC-CCCGG        CCCCCTCCGAATGCG  57 44
        phaR 2842019 .. 2842038 - -16.4  -4.24204   GACTCATACGGAAAA            GGGGCGCC CGTG GGCGCCCC             TTTTCCTTCAGCCAG 100 52
CXD87_RS13780 NONE
CXD87_RS13775 NONE
CXD87_RS13770 NONE
CXD87_RS13765 2838710 .. 2838724 -    -7  -2.79183   GGGACCGCCACCATA               CCGCGC CGC GCGTGG               CCGCGCTACCAGATG  48 31
CXD87_RS13760 2837726 .. 2837736 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS13755 2836677 .. 2836687 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS13750 2835637 .. 2835677 - -16.2  -2.71011   ATGCCTTGGCAACGA  GCCGGCGCGGCGCTAT GGTATGCGG ATAGCGCCGCGCTAGC  TGTGAACTGTCAATA  77 21
CXD87_RS13705 2827748 .. 2827794 -  -5.1  -2.97188   GGACAGGACGAGACA TGGCGCGCCACGCAGGCTCGA GGCCGGT CCG-GCCCGCGCATC-CGCCA GGGATGCGCGCGAGC  47 111
CXD87_RS13700 2826812 .. 2826858 -  -5.1  -3.29461   GAAGTCTTTGCATAA CCCTAGGATACGCCATGCGCCGC GGC GCTATGCCTG-CGCATCC-AGGG CGGCCGCGCCGATCC  51 6
CXD87_RS13695 2826520 .. 2826561 -  -4.3  -4.08216   CCAGGTCGGCGAAAA CCGGCTGACCATGATGTCGC AAG ACGGCACCCTGCCCAG-CGG CCCGTTGGCCGAGCA  60 73
CXD87_RS13685 NONE
CXD87_RS13680 2824475 .. 2824515 -  -6.6  -2.78596   TACCTCGTGACGATA CGGTG-CGCCGGGCGGCCG ATGG CGGCCGCCGGATGGCTGCG  CCTATGGTAGCCCGG  47 111
CXD87_RS13675 NONE
CXD87_RS13670 2823852 .. 2823875 -    -3  -4.07568   CGGCCGCGCGGAAAA          GAGCCAGC TTACCATC GCCGGCGC           GGCGCAGAAGGTCAG  59 37
CXD87_RS13665 NONE
CXD87_RS13660 2822601 .. 2822630 -  -7.7  -3.21395   AGCTGCTGGACAAGA       GCTGCGGCGCCGAG GCG CAAGGCGCCAC-GC       GGCTGGCGCGGGGGC  53 277
        clpB 2817967 .. 2817990 - -13.2  -5.48063   AGCGAACAGAAAAAA          CCCCTGG-TCC ATT GGATCCAGGGG          TTGAGAGACGCGGCG 100 69
CXD87_RS13635 2816200 .. 2816229 -  -4.9  -3.05384   TCCGGCGCCAGCCAA       CTGCCGAGGTCCTG CTG CAGGATCCC-GCTG       ATCACGCGATCGCCG  45 123
CXD87_RS13625 2812117 .. 2812150 -   -11  -2.68942   AGCGCCGGACAGAAC     CCCGATACGCCGCGC CTGGT GCGCGG-GCATCGCG     TCGACACCCTCAAGC  59 388
CXD87_RS13615 NONE
CXD87_RS13610 NONE
CXD87_RS13605 2808941 .. 2808973 -  -9.7  -3.05463   ATGTGCGGCAGGCAA      CCCTGCCGGCGGG CTGCCGC CCCGCCGGCCGCA      ACAGCCGCGCCTGAC  57 47
CXD87_RS13595 2806468 .. 2806489 -  -8.6  -5.47218   GCGTAGGGAAAAAAA           GCAGGCGC GCTCAG GCGCCGGC            GCGCAGCACCTGGCC 100 14
CXD87_RS13590 2805104 .. 2805119 -  -7.5  -3.14132   GCGCGCCCTCATCAA              GGCGC GCCGCA GCGCC               GGCCACGGGCGCAAC  53 377
CXD87_RS13560 NONE
CXD87_RS13555 2799119 .. 2799130 -  -7.2  -4.15565   TTGAGTACCGTAAAA                CCGC CCAG GCGG                 GCCCACGAAACATGT  67 77
CXD87_RS13550 NONE
        crcB 2798117 .. 2798159 - -13.2   -3.6502   CACGCCGGACTGAAA CCTGGCGCCCGCCGCCGGGC TCA GCGCAACAGCAGGCGCACGG TCGCCAGCCCCAGCC  79 3
         alr 2793798 .. 2793821 -    -8  -2.56596   TTGCGTAGCAATTCA          TGCCAGCAGG CCGG CCCGCCGGCG           ATCCGCACAATGCTC  50 39
CXD87_RS13520 2792755 .. 2792777 -  -5.5  -4.45399   ACAGCAACAGGAAAA          TCTGGCGGCG TCAG CGC-GCCAGC           GTGACGATCCGGCCT  72 215
CXD87_RS13510 2790971 .. 2791017 - -12.9  -2.73875   CGCCGCCGAACACGA GCAGCCCGAGGCGCGGCTA TCCGAGTTC CAGCAGCGCCGCCGGCTGC AACTGGCCATCGAGC  63 213
        radA 2787330 .. 2787340 -  -4.6  -3.13299   CCAGCAGACTCAAGA                 CAGG CTC CCCG                 GACGTGCCATCAACG  47 35
CXD87_RS13490 2786440 .. 2786460 -  -6.7  -3.58905   AGCCCGCACATACAA            GGCGCGGCA AAA TGCCGCGTG            ACCTATAATTCGTTG  58 119
CXD87_RS13485 2785877 .. 2785898 -  -2.1  -3.53012   CGCTGGTGCTGCAAA           CCG-TGGCGC TGG GCGGCGTCGG           CCTGCTGGGAGGATG  47 295
CXD87_RS13450 NONE
CXD87_RS13445 NONE
        maiA 2777899 .. 2777920 - -17.3  -5.67063   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 45
CXD87_RS13430 2777494 .. 2777515 - -12.3  -5.09762   AGCGCAATACAAAAA           GCCGCTCAC TTGC GTGAACGGC            CCTTTTGTGTCGACG 100 77
CXD87_RS13420 2775490 .. 2775510 -  -6.7  -4.14392   CGGCAACCTGGAAAA            GACACTGGC CGC GCCCGTGAC            CGTGATCGTCGCCCA  69 417
CXD87_RS13410 2774151 .. 2774177 - -12.2  -3.85698   GGCCGCCCGGACAAA         CCGGTTTGGCGT CGC ACGCCAGGCCGG         CTGTAATGTCTTGAT  81 92
        scpB NONE
CXD87_RS13395 2769973 .. 2769992 -  -9.3     -6.13   ACACTCAAAAAAAAA            TGGGCTG CACGCC CAGCCCA             CCGTATTGCCTGGCC 100 453
        rimP NONE
        nusA NONE
CXD87_RS13380 NONE
        rbfA 2764463 .. 2764492 -    -5  -2.60341   AAGGAGAAAAAGCAG       CGACGA-CAGCCC GGTCA GGACTGGTCTTCG       GGCTCGTCGGGAACA  42 10
        truB NONE
        typA 2761794 .. 2761820 - -22.4  -4.65895   GGCTGCATGTAAAAA         GGGTTGTGGCCG CCA CGGCCACAACCC         TTGCGCTGGCACCGC 100 66
        polA 2757084 .. 2757109 - -17.5  -2.69151   GGCTGTCAGACAGTA         TCCGGCCGGCG CGGA CGCCGGCCGGG          GCCGCATCAGTGCGC  80 32
CXD87_RS13340 NONE
CXD87_RS13335 2755293 .. 2755318 - -21.9  -2.52676   GACGCGGGCAACTGA         GGGCCTGCCCG AGCA CGGGCAGGCCC          CGGCCCGCTACAGGT 100 33
CXD87_RS13325 2751929 .. 2751980 -  -7.2   -4.8048   GGGGTAGAGGAAAAA CTCTAACCC-CGGGTGCCTGTCCCC GCA GGGGACTGGCACCCGCAAACTCCAA CCCCGGCGTGCCTGT  84 117
CXD87_RS13295 NONE
CXD87_RS13290 NONE
        parC 2737758 .. 2737773 -  -8.2  -3.22475   TTCACGCTCAGAACA              CCGGCG ACAG CACCGG               CTGCCTGGGACGCAC  58 2
CXD87_RS13280 2736333 .. 2736367 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS13255 2732683 .. 2732711 -  -8.7  -3.29144   CTACGTGCTGGAGAA        CGGCCGGGTGGTG CTG CACGACACGGGCG        CCAACCTGCTGGTCA  59 157
        ugpB 2723508 .. 2723538 - -21.1  -3.18118   CCAGGTGAGAATACA       GGCGGCCGGCCGG TAATG CCGGCCGGCCGCT       ACAGGCACAGGCCAA 100 145
        ugpA NONE
        ugpE NONE
CXD87_RS13190 2720478 .. 2720511 - -17.3  -3.44325   ACGTCGTACAAGTAA     GGCGCATGCGCGCGG CTCG CCGCGCACGGGCGCC      TGTCCCCGCTGCGGC  87 102
CXD87_RS13180 2718459 .. 2718469 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS13175 2717250 .. 2717290 -  -3.1  -3.06261   TCGCAACCGCGAACA CGCG-CGC-CGCCTCGCCG CTGGT CGGCATCGCCTGCGTCGCG GTGGGCATCTTCTGT  42 191
CXD87_RS13160 NONE
CXD87_RS13155 2715579 .. 2715637 -  -2.9  -4.56597   GCCTTGCGCCAAAAA TCCCATTGTGCCGCAC-GGGCCGCGCGGC CGG GCCG-GTAGCCCTGCGCCCGGCAAGGGGA TCAGGCTGCCGCGGG  69 76
CXD87_RS13150 2714665 .. 2714697 -  -9.7  -3.06671   AGATCGACCGCAACA      TGGCCATGCTGGGCG TGA CGCGCTGCACCGCCA      TGGCGCCCGGGCTGC  59 67
CXD87_RS13090 2704928 .. 2704956 - -10.1   -2.9348   TGTAAATTTTACATA        GGGTGTGGCGCGG TCG CCGCGCCCTAGCC        GCCGTGCTGCGCGTC  59 20
CXD87_RS13085 NONE
        arsC 2702837 .. 2702868 - -24.5  -3.90112   CGGCCGTCAACGAAA      GCGGCCTGGCGCG TCTTGC CGCGCCAGGCCGC       AATCACTCGCCCTCA 100 70
CXD87_RS13045 2697596 .. 2697627 -   -10  -2.81547   CCTGCAGATCAACTA      TGCGCTGGACGACC GCCA GGCCGCGCAGCGCC       TGTTGCCGCTGGCCC  56 306
CXD87_RS13015 NONE
CXD87_RS13010 2692017 .. 2692060 -  -8.3  -2.51133   GAGTCATCCACGAAC GCGATCGAGGTGAGCAGCTCCA CGC TGGA-CTGCG--CCTCGACCGC CTGCATCACGTGCAG  51 258
CXD87_RS12965 2672060 .. 2672117 -  -7.7  -3.07113   GATCAGTCCAGCCAA CGCAACCGGGGCCAGGGCGC-GCGCCGCT CGTG AGCCCCGCGGCGCCC-G-CCGCG-CTGCG CTATGTGGACGACAG  53 66
CXD87_RS12940 2667703 .. 2667726 -  -8.8  -3.53012   GCCCGGCGCCGCAAA          GC-GATGGCGC AGG GCGCCAGCTGC          GGCGGCTGTTCGCCG  61 350
CXD87_RS12915 2664629 .. 2664661 - -12.7  -2.73875   CCTCGGCGAACACCA     GGCC-GTCCGGCCC CAGTTC GGGCAGGACCGGCC      GCGCCGCGCCAGGCG  65 244
CXD87_RS12905 2661032 .. 2661064 - -10.5  -3.05963   ACGTGCAGGTCAATA     CCCTGCGCGCCGCC CTGCCC GACGGCGCGC-GCG      TGGGCACGGTCGACA  59 285
CXD87_RS12890 NONE
CXD87_RS12885 2655098 .. 2655113 -  -4.6  -3.41051   CTACTTCGACGAGAA              CCGGCG CTTC CACCAG               GCCATTGCCGATCTC  52 291
CXD87_RS12875 NONE
CXD87_RS12870 NONE
CXD87_RS12865 2650613 .. 2650625 -  -3.3  -2.64243   GGATATGCGACAGCA                GCTTC ATG GACGC                GGCTCCTGCGGGGCT  39 16
CXD87_RS12860 NONE
CXD87_RS12855 2648041 .. 2648065 - -13.5  -3.21416   CAGCGCCATGAGCAA          GGCCGGGCTGG ACG CCAGCCTGACC          GCCGTCGGCCCGCCG  72 427
CXD87_RS12835 NONE
CXD87_RS12830 NONE
CXD87_RS12825 2642058 .. 2642094 -  -9.4  -3.02511   GGTAGCCGGCCAAGA   CGGACGGTATCTGTCCC CGCA GGGACAGCCAGCG-CCG    GCGACGGGCTACTTC  57 34
        flhB 2635760 .. 2635799 -  -3.5  -3.67296   CAGCACCGAGGGAAA  CGCGGCGAAATCCA-GCG GCTTG CGCGTGAACATCGCCACC  AGCAGGATCATCACC  54 199
        flgB NONE
        flgC NONE
        flgD NONE
CXD87_RS12750 NONE
CXD87_RS12745 2625740 .. 2625770 -  -2.2  -4.32034   GCATCATGATGAAAA       CTCCTGGCGCGGCG CTT CGGCGCGCGCGTTG       ATAATCAGCTGGCCG  65 30
        flgG NONE
CXD87_RS12735 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 2618742 .. 2618767 -   -14  -3.05384   CCGCTTTCCATCGAA         CACGCGCTCC TCGAGG GGAGCGCGCG          CCATTTCCCGACTAC  72 57
CXD87_RS12710 2616865 .. 2616876 -  -2.2  -3.68853   GCAAAAACCGCCAAA                CAGA ACTA TCCG                 GCCGCCATTTCGCCC  51 49
CXD87_RS12705 2615058 .. 2615093 - -22.6  -4.56597   CGCTGCCTGTAAAAA    GACGATCCGGCGCGGC GCTG GCCGCGGCGGATCGCC     GCTTTCCCGTCCTGG 100 92
CXD87_RS12700 2613502 .. 2613517 -  -4.6  -3.78419   GGAGGAAAGATACAA              GGCACC CAGC GGCACC               CGACGGCACCCGACG  58 47
CXD87_RS12695 2612260 .. 2612286 -  -2.9  -3.90744   CTGGCGGGCAAATAA        CCCCTTCGGG TGCCTGTC CCCGC-GGGG         ACAGATACCGTCTTG  58 45
        fliE 2598913 .. 2598934 -  -7.2  -2.88544   CTGGATGCCCATATA           CCGCCGCA ACTCTA CACGGCGG            TGGCCGAGCTGCTGG  50 518
CXD87_RS12570 NONE
CXD87_RS12565 2592222 .. 2592238 -  -3.5  -3.31415   GACGACGAAATCGAA              GCCGGTC ACT GTGCGGC              GATGAAACCGTTGTC  47 14
CXD87_RS12560 NONE
CXD87_RS12555 NONE
        rpsB NONE
CXD87_RS12525 2582821 .. 2582855 - -13.5  -3.83144   GTAAGACAAGAAATA    GGCCGGC-AGTTCGGG AAGC CCCGCCCTGGCCGGCC     CCTACGATGACGCGT  83 40
CXD87_RS12520 NONE
CXD87_RS12515 2581429 .. 2581480 - -10.8  -3.10344   CGCGTACGGAACAGA TTCCGATATCGACACCGGAGCCGT CGAT ACGGCCCCGATACCTCAACCGGAA TTATACGGTCATGAT  64 26
        uppS NONE
CXD87_RS12505 NONE
CXD87_RS12500 2578463 .. 2578491 - -10.1  -3.59979   CGGGTGGACGCGAAA        GGCGGCCCGGCGC GTC ACGCCAGGCCGAG        ATTGCCGGCGAATGA  67 11
        rseP NONE
        bamA 2574641 .. 2574674 -  -2.9  -3.72893   TATTGTGCCACTAAA     CTGCGGGACGGCCGG GCAA CCGGCCATTTCCCAT      GTTTTCATGCGTAAC  53 65
CXD87_RS12485 2574011 .. 2574021 -  -2.4  -2.64218   AGGGTCCAGCAGAAC                 CGGC ATG GGCG                 TGCTTATCGGCCCAG  38 29
        lpxD NONE
        fabZ NONE
CXD87_RS12470 NONE
CXD87_RS12465 NONE
CXD87_RS12460 NONE
CXD87_RS12455 NONE
CXD87_RS12445 2565658 .. 2565678 -   -14  -5.40072   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 46
CXD87_RS12435 2564333 .. 2564352 - -10.6  -3.09015   TTCACAGCTAGTGAA            GCCTGCCG TCGC CGGCGGGC             AAGGTCATGGTTACG  64 36
CXD87_RS12425 2562300 .. 2562323 - -17.4  -3.59979   GGCGCGGACGCGAAA          GGACGCGCCG CGGC CGGCGCGCCC           GGGTCGAACCTCACG  89 36
CXD87_RS12420 2561086 .. 2561106 -  -9.7  -3.67622   CAGCGCGAAAAGGAA            CGTGTCCTG AAG CACGACACG            CGCGTCAACCAGCGC  68 30
CXD87_RS12410 NONE
CXD87_RS12405 NONE
CXD87_RS12400 2558657 .. 2558670 -  -2.4  -2.62616   GGACGCTCGACATGA               CGTT AACGTA AACG                TAAGTCGTTGGCGAG  38 129
CXD87_RS12395 NONE
CXD87_RS12390 NONE
        mmsB 2555272 .. 2555288 -  -4.3  -3.08464   GTATCAGGCATGCAA              GCCTCTC GCG GAATGGC              CCTGGCCGCCCGGCC  47 50
CXD87_RS12380 2554816 .. 2554843 -  -6.8  -2.90075   GGCGCGCCAAGTATA        GGCCGCCGCGCC GTTC AACGCGGCGTCA         CCCGCACCGCGGTCA  50 12
CXD87_RS12375 2553868 .. 2553902 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 204
CXD87_RS12350 NONE
CXD87_RS12345 2546329 .. 2546356 - -14.2  -6.15828   GGCACCAAAAAAAAA        CCCATCC-CGGCA TGG CGCCGTGGATGGG        GCGGACGTTCGAGGC 100 47
CXD87_RS12315 2539708 .. 2539718 -  -4.6  -3.07113   CACCAGGTCATCCAA                 GCCC ACT GAGC                 CCCCTATTCGCGAGT  45 156
CXD87_RS12310 2539397 .. 2539407 -  -2.6  -3.57144   CGCGCCACCTGGAAA                 TAAT CGG ATTA                 CATCTGCAAGCGCTG  48 23
CXD87_RS12305 2538316 .. 2538335 -   -10  -4.07568   GGCTTCGCGCGAAAA            CGGGGTTA CGGT CAACCCCG             ATTATGACACTGCCG  78 27
CXD87_RS12300 NONE
CXD87_RS12295 2536317 .. 2536365 -  -8.6  -2.62184   GGCCGCTGGACACCA CGATCGCGCGC-CTGGCCGCGCC CGTC AGCCCGGCCTGAACGCGCGGCCT ATTTGGCGGCCTGGC  52 24
        apbC NONE
CXD87_RS12270 NONE
CXD87_RS12265 NONE
CXD87_RS12260 NONE
CXD87_RS12255 2528602 .. 2528619 -  -8.4  -3.29829   TATAGCTTCCGACAA             CCGCAC GCCATG GTGCGG              TGCCCGCATGCAGCA  58 88
CXD87_RS12250 2528306 .. 2528320 -  -5.6  -3.13403   TCTTGGTCAGCAACA               TGCCGG GCT CCGGTA               TCAAACGAGGGTGGT  49 26
CXD87_RS12245 2524818 .. 2524840 -  -3.2  -3.01712   CGCGGGTGCGGAAGA           TGTCGGCCAC CAC GTCGCCGTCG           CCGGCCAGCAGCGCC  42 522
CXD87_RS12235 NONE
CXD87_RS12230 NONE
CXD87_RS12225 2522844 .. 2522894 - -10.2  -3.61398   TTTCGCGCGCAAGAA GGTCCGGCGCAC-GCGCCCGGCC TGAGGC GGCCGGACGCCGCGCGGCTTGCC GCCCGGGCTACTGGC  67 33
CXD87_RS12210 NONE
CXD87_RS12205 2519218 .. 2519238 - -16.9  -4.07687   ACGCCCCGTGCAAAA            GGCCACGAG TGT CTCGTGGCC            TTTGGATTTCGTGCT 100 121
        leuC NONE
        leuD 2516933 .. 2516969 - -18.6  -3.37556   GGGAAAACAAGGCAA    GGGCCCGCCGCGCGCG ATCAA CGCGGACGGCGGGCCG    GCAGGCAACGCGTCA  93 38
        leuB 2515760 .. 2515776 - -10.1  -4.58685   AAATTGTGCGAAAAA              GCCGCAA AAA TCGCGGC              CCTTGCGCACAGTGG  93 73
         asd 2514440 .. 2514496 - -11.8  -4.07568   CCTTGCCGTCGAAAA CGGCGCGCCT-GC-G-A--CAAGGGCGCC CGCG GGCGCCCTTGTATCCTGCCATGCGCGCCG GCGCCGCGCGTCAGG  82 36
CXD87_RS12180 NONE
        truA 2511820 .. 2511832 -  -4.7  -3.61398   CTGGGTGTGGAAGAA                TGCGC TGA GCGCG                GACCGTTTGCGTAAA  52 130
CXD87_RS12170 2510693 .. 2510709 -  -6.5  -3.53012   CGCGTCGCGTCGAAA              CGGGG TTATTTG CCCCG              CGCCACCGTCGCCAT  56 14
CXD87_RS12165 NONE
CXD87_RS12160 NONE
CXD87_RS12155 NONE
CXD87_RS12150 2507348 .. 2507368 - -15.5   -5.1101   CGATCAGGCAAAAAA            CGCCAAGTC AGC GACTTGGCG            TTTTCCGTTTCGATA 100 62
CXD87_RS12145 NONE
        yaaA 2505248 .. 2505285 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
CXD87_RS12135 2503550 .. 2503564 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  61 494
CXD87_RS12110 2499343 .. 2499370 -  -7.6  -3.88291   GATGACTCCTAGAAA        CGGGCCGCATTG TACG CGATCCGACCCG         AGTTGATCTCAATCC  66 34
CXD87_RS12105 NONE
        plsX 2498034 .. 2498050 -  -4.4  -3.14211   AGCTTTTTCCATCAA             GCGG-TG TCCC CAGCCGC              GCCGGGCGCGACGGC  47 5
CXD87_RS12095 2496997 .. 2497044 - -11.9  -2.50816   TCGGTATGGAGGAAT GGCGG-CGTGCGCGGT-CGCGCA CAGG CGCGCGCAGCGCGCCCTTCCGCC TACATGCGGGCCAGC  61 25
        fabD NONE
        fabG 2495232 .. 2495265 - -12.3  -4.03234   GCGTTTCCACAGAAA     CGCGCGGCTGGGC TTGGATGG GCCGCGCCGCGCG      CTTCTCACTATTGCA  83 33
CXD87_RS12080 2494784 .. 2494804 -  -4.5  -3.55563   ACGGCATTCCTGAAA            CCGCCCCGA TTC CCGGCGCCG            CCCCGAAGTGTTCGA  52 72
        fabF 2493414 .. 2493448 -  -6.5  -3.69216   CGGTTATCGAAAATA    CCGC-CGTCCGGGTTCA ACT CAAACCCG-ACGAACGG    CCATCGAACCGTTGG  59 9
CXD87_RS12070 NONE
        rpoE NONE
CXD87_RS12060 2491813 .. 2491826 -  -2.3  -3.54408   GCGCATGTAAAGCAA               CGGTG TCAT CAACG                TCCTGCTCCGGCGTC  48 20
CXD87_RS12055 NONE
CXD87_RS12050 2489177 .. 2489201 - -22.9  -4.65895   CGGGCGAGCCAAAAA          CGAGGGGGCGC CAT GCGCCCCCTCG          TTGCGGCAACCAGCC 100 62
CXD87_RS12045 NONE
        lepB 2486416 .. 2486429 -  -3.7  -3.17392   TAGCGGTCAATGGAA               GCGGC CAAT GCGGC                TCAAATCGCTGAAGT  45 3
CXD87_RS12035 NONE
CXD87_RS12030 NONE
        recO NONE
CXD87_RS12020 2483075 .. 2483101 - -15.9  -3.14344   GATGTCGCGGACGAA        CAG-GCCGCGCG GGCC CGCGCGGCGCTG         GGCGCGCTGGGCATC  80 157
        lptF 2474398 .. 2474423 -  -6.1  -3.01791   ACGTGCTGCCCAACA         GCCAGGTGGTGC TGC GCAGCACC-AGC         GTCATCGCCCAGTAC  48 280
CXD87_RS11965 2472292 .. 2472305 -  -2.3  -3.14132   CTTGCCGCCGATCAA               TAGCG ACTT CGCTC                ATTTCTCTGCTCCTC  42 124
        mmsA 2470729 .. 2470752 -  -8.2  -3.15544   CTGCAGGTTCATGAA          TTGGCCCCTGT TAG AC-GGAGCCAA          TTATAAGTAATATAG  56 98
CXD87_RS11955 2469572 .. 2469606 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS11945 2468106 .. 2468123 - -14.1  -4.41895   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 77
CXD87_RS11930 2464568 .. 2464614 - -21.5  -2.62184   TGCTGGTGTAGAGCA GCCGGCGCTTGCCGGCGCGCGC ATCG GCGCGCG-CGCCCAGCGTCGGC ATGGTCAGCATGATG 100 294
         acs 2461251 .. 2461281 - -14.7  -4.17089   TGCAAAGCCGGAAAA      GGCACGGGCCGGTC ATGC GACCGGCCCG-GCT       GGCTACAGACTGACG  95 101
CXD87_RS11915 NONE
CXD87_RS11910 2459270 .. 2459295 -   -14  -3.28712   GCGGGCGGCTGAGAA         CGC-GCCGCGC TCAGC GCGCGGCCGCG         CAATGCCCGCGTACC  75 10
CXD87_RS11885 2454122 .. 2454161 - -14.2  -3.62597   GGTACGCGTGAAGAA  GGCCGGAATGCCG-GCGCC GCC GGCGCGCAGCTTCTCGGCC  AGCGTGCCCTGCGGC  80 439
CXD87_RS11875 2453065 .. 2453082 - -14.1  -5.75945   ATGGGCGAAAAAAAA             CGCCGGC TAAC GCCGGCG              CCTTACATACAAAAA 100 51
CXD87_RS11870 NONE
CXD87_RS11865 NONE
CXD87_RS11860 2449052 .. 2449075 -  -2.3  -4.71426   GGTTGAGGAAGAAAA          TGCGGCAGGC GCCAA GCC-ACCGCG          TTCAATACGCGCCGC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 2445504 .. 2445561 - -13.4  -3.48276   CGGCCCTGGAGATAA CAGGGC-CGCCGCGCGGGC-GGC-CCG ACCGGCG CGGCGCCTGCATGCGCCGCGCGCCCTG CCCTACTTGCGGTCT  75 28
CXD87_RS11840 2444404 .. 2444416 - -10.5  -3.38291   GGGAGAATGTCAGAA                GGCCG TCT CGGCC                AGCCACTGGCGCCAC  65 7
CXD87_RS11830 2441580 .. 2441590 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 194
CXD87_RS11825 NONE
CXD87_RS11820 NONE
CXD87_RS11815 NONE
CXD87_RS11810 NONE
CXD87_RS11805 2436352 .. 2436398 - -14.3  -3.09581   CAAACGCGGAAGACA GCGGT-TTCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGATTACTGA CCATTAACGCAGGTT  73 29
        ftsB 2435924 .. 2435939 - -10.4  -5.86332   CCAAGGCAAAAAAAA              CTCCCC TGGC GGGGAG               TGTTGGCGCGTCCGG 100 50
CXD87_RS11790 2433371 .. 2433391 -  -4.5  -3.04792   TGATCAGGCGCAAGA            GCGGCGTCA TTG CGGCGCCGG            GGAGCGACTGAGCCA  45 11
CXD87_RS11785 NONE
CXD87_RS11780 2432126 .. 2432153 -  -6.2  -3.39784   CCAGGCCGAACAACA        CGCGCAGCGCCTG GCC CAGG-GCTGGCCG        GGCGGAGCCGGGCCG  55 294
CXD87_RS11700 NONE
        sdhC NONE
        sdhD NONE
CXD87_RS11685 NONE
CXD87_RS11680 2411055 .. 2411065 -  -6.8  -3.01906   CCAATAAACACTAGA                 CCGT ACG ACGG                 ACCATCAGTTCCTTG  51 10
CXD87_RS11675 NONE
CXD87_RS11670 2409391 .. 2409404 -  -9.5   -5.4505   GCCGGCAAGAAAAAA               CCGCC CGAA GGCGG                TTCTTTCAGTGGACG 100 54
CXD87_RS11640 NONE
CXD87_RS11635 NONE
CXD87_RS11630 NONE
CXD87_RS11625 NONE
        potA NONE
CXD87_RS11615 NONE
CXD87_RS11610 NONE
CXD87_RS11605 NONE
CXD87_RS11600 2394997 .. 2395015 -  -5.2  -4.36914   TGCTGGCCGAGAAAA             TCACCGAC GCG GCCGGCAA             CATGGCGCCGACGGT  69 331
        rmuC 2393062 .. 2393101 -  -5.5  -3.90744   TTGGCGGCGAAAGAA  TTGGGCGGACCGCCCGCC CCGCC GG-GGGCTCTCCGCCCCC  GCGCCTGCTCCTCAG  63 37
CXD87_RS11585 2391385 .. 2391399 -    -7  -2.96984   GAAATTTAGCAGATA               CCGGGC CAG GCGCGG               GCCAGAATCGGGGCC  51 1
        rpiA 2390532 .. 2390560 -  -5.2  -4.07885   TAGTGCCCCTGAAAA       CGCGGTTGCGCAG AGGG CTGCCCGACC-CG        CAAGGTTATGACCCG  64 106
        phoU 2389511 .. 2389566 -  -8.1  -3.05596   CAGGCGCGGATTGAA TCGGCCTA-TGGCGAGGCGCCCG-CGC TGCT GCGGCTGGCGCCGGGCGAGCAGGCCGC CTGGCCATATGAACC  52 166
        hrpA 2381944 .. 2381984 - -17.6  -3.57263   ACTGGCACCCGCAAA CTCTCGGGGTGCCTGTCCC CGCA GGGACAGGCA-CCCGTGGG  ACAGCCCCCTACCGC  90 34
CXD87_RS11545 NONE
CXD87_RS11540 NONE
CXD87_RS11535 NONE
CXD87_RS11530 NONE
CXD87_RS11525 2373272 .. 2373303 - -13.6  -3.04144   TGTTCATCTGGAACA      GTCCCGCCGCGCCG GCCC CGGCACGGCGCGAA       TACGACGCGCCCTAT  69 250
CXD87_RS11515 2370839 .. 2370856 -    -4  -3.76641   AGCGCAATACGCAAA             CGTCGC TTATCC GCGGCG              GCGCCTGTCTTCATA  57 14
CXD87_RS11510 2369275 .. 2369303 -  -2.3  -3.27743   CATCATCAAGGAATA       CGC-CGGCCTGT TCGTCT ACTGGCTGCGCG        GCTGGGTGTAACGGC  44 438
        msbA 2365546 .. 2365562 -  -6.5  -3.53012   TGGCCGCCGCCGAAA              CCATGGC GCC GCAATGG              GCGCAACAGGTGTTG  55 148
CXD87_RS11480 NONE
CXD87_RS11475 2362279 .. 2362292 -  -3.7  -4.74103   GGCCGAACTGAAAAA               GGCGC TCTC GCGCG                ACCGCACGCGCATGA  77 418
CXD87_RS11455 NONE
CXD87_RS11450 NONE
CXD87_RS11445 2357505 .. 2357543 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD87_RS11440 2354270 .. 2354280 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 2354061 .. 2354095 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD87_RS11430 2350907 .. 2350960 -  -6.6  -3.76224   TGCCCATCTACGAAA CCGCCGCCCTGCTGCGCAGCGC-CGGC ATC GCCGTACCCTGAGC-G-ACGCCGGCGG CGCGCGGTCACCAGC  62 33
CXD87_RS11390 2344025 .. 2344057 -  -4.6   -4.1899   CCAGTGTATGCAAAA      CGCGGCGGCCGTCA CAATC TGCCGCCTGCCGCT      CAGCGTCGCCGCGAC  66 25
CXD87_RS11385 2342537 .. 2342559 -    -9  -3.03441   CATCACCGCCGAACA           GGTGCGCGAC ATG GTCGCGCGCT           TTGCCCGCACCCTGG  55 107
CXD87_RS11375 2339738 .. 2339796 - -15.8   -3.6106   TGGAATATGTCGAAA GCGGCCGGCGCGAAGGCGCGCGGCTGC GCATGG GCGG-CGAGCGCGTGCGCGCCGACAGC GGCGGCTACTACATA  85 396
CXD87_RS11340 2332249 .. 2332278 - -18.5  -3.09492   TCGCCAACGGCAAGA       CGCGCGCCCAGGC CGAA GCCCGCGCGCGCG        AACTGCTGACCCTGG  85 432
CXD87_RS11315 2325514 .. 2325562 -    -8  -3.67296   CATTATCGATCCAAA CGGCGCGCGCGGCCAAGCGCGGGC CCA GCCGGCG-TCAGGCGC-CGCTCCA GGCCTCGGCGTTCAG  63 11
CXD87_RS11310 2324314 .. 2324352 -  -8.7  -3.03159   CCAAGTCCGCCAAGA  GCGCGGGCGGCGGCGCGGC CGA GGCG-GCGGCCGGC-GCGC  ACTGAGCGCCAGGCC  55 49
CXD87_RS11280 NONE
CXD87_RS11275 2316493 .. 2316512 - -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 54
CXD87_RS11260 2313209 .. 2313223 -    -7  -3.01924   GACGCTGGCCGAACA               GGGCGG CGC CGGCCC               GCACCTGATTACCGC  52 478
CXD87_RS11245 NONE
CXD87_RS11240 NONE
CXD87_RS11235 NONE
CXD87_RS11230 2307258 .. 2307289 -   -10  -4.07568   CTGCTTCCGGGAAAA      TGGGCGGGCCGCCGC CGT GCGG-AGCCCGCCGC      CGATGCGGGATTACT  78 36
CXD87_RS11220 2305604 .. 2305648 - -15.6  -3.17075   CGCCGGGCAAGGCAA GGCGGCC-GAGCTGCTGGCGC AGGC GCGCCAGCTGGCCTGGACGCC GCTGGTCGACGCCGA  77 197
CXD87_RS11205 2302443 .. 2302464 - -15.1  -3.01712   CGCGCTGGTCGAACA           GGCCGCGGC GGCG GCCACGGCC            ATGGAAGAACAGGCC  74 197
        greA 2299635 .. 2299655 -  -9.6  -3.07104   CGACAACGATACAGA            CGCCCGGC GCACG GCCCGGCG            TTCAGGAATTCGGAT  57 238
CXD87_RS11185 2297602 .. 2297639 -  -7.5  -3.16742   CTGAACGCTCACGAA   CGCGACCTGCGCAGCCGC CTG GAGGC-GCTCAGCGCGCG   CGGAGACGGCGCGGT  53 203
CXD87_RS11140 NONE
CXD87_RS11135 NONE
CXD87_RS11130 2289936 .. 2289949 -  -3.1  -3.17444   GGAGAAACAGACATA               TCGAA CCTC CTCGA                ATTGAAATCTTGACG  44 58
CXD87_RS11125 NONE
CXD87_RS11120 NONE
CXD87_RS11115 NONE
CXD87_RS11110 NONE
CXD87_RS11105 NONE
CXD87_RS11100 NONE
CXD87_RS11095 NONE
CXD87_RS11090 NONE
CXD87_RS11085 NONE
CXD87_RS11080 NONE
CXD87_RS11075 NONE
CXD87_RS11070 NONE
CXD87_RS11065 NONE
CXD87_RS11060 NONE
CXD87_RS11055 NONE
CXD87_RS11050 NONE
CXD87_RS11045 NONE
CXD87_RS11040 2275766 .. 2275788 - -14.2  -2.70932   GCGCTGCGCGAACGA           GGCTACGACA GCG TGCCGTAGCC           CCCCTGCCCGGGCCA  69 44
CXD87_RS11025 2273571 .. 2273585 -  -5.6  -3.59262   GCCGAGATCGCGAAA               CGGCCT TGC AGGCAG               GCGATGCAGCAGGTC  54 514
CXD87_RS11005 2266627 .. 2266643 -  -5.1  -2.78463   ACCTTGCGCAGCACA              TTGTGCG CGA CGCAGAA              CCTGCCTGCCGGCGC  43 398
CXD87_RS10990 2264702 .. 2264752 -  -5.5   -3.7108   AGCTGGACACCGAAA TCTACG-ATCG-TGAGCTGGCCG GCTGGAT CGGGCAGCGCATCGACGCGCAGA TCCGCCACGCGCGGC  58 123
CXD87_RS10980 2263118 .. 2263140 -  -4.1   -5.4505   CCGCCCAAGAAAAAA          GCACCC-GGC TTGC GCCTAAGTGC           CTGTTTTCAAACGAA  90 47
CXD87_RS10970 2259950 .. 2259990 -   -11  -3.53012   GGGTCCCGGGCCAAA  GCGCGCAGATCCCGGCCG TTACC CGGCAAAAGCCTGCGCGC  AGGCCGCGCGCCCGT  70 65
CXD87_RS10965 2259299 .. 2259333 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS10935 NONE
        ectA 2250881 .. 2250891 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS10925 2249841 .. 2249863 -  -6.2  -2.78463   AGCGTGTGCATCATA           CGGCGCCA TTGTACG TGGCGGCG           CGCCGGATGCCCCCT  47 39
CXD87_RS10920 2249228 .. 2249273 - -11.7  -3.04144   CGGCGAGGGCGAACA GGCCTGAGGCCGCGCGGGCCTG GCT CAGGCCTGCACGTCC-CAGTCG CCGCGCCCGCGGGTG  65 4
        tsaD 2244827 .. 2244845 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 204
CXD87_RS10885 NONE
CXD87_RS10880 NONE
CXD87_RS10875 NONE
CXD87_RS10870 NONE
CXD87_RS10865 2238914 .. 2238941 - -15.5  -3.75153   GCGCGCCAACGCAAA        CGTCCCGGGGC GTTGCA GCCCCGGGGCG         TCATTCCTGCGGATC  85 49
CXD87_RS10860 2237868 .. 2237921 - -14.8  -3.55444   GGGCCATGCCGGAAA CGGCTGTCCGAGCGGACGCCCCGTCC CCCACC GGACGGGACGTCC-C-CGG-CAG-CG CCTCAGAAGGTCCGC  81 28
        rlmD 2236366 .. 2236397 -   -18  -3.25169   CGAAGAACTGAGCAA      CACCGGGCGGCG CTGAACGC CGCCGCCCGGCG       GGCCGCCTCAGGCAG  89 33
CXD87_RS10845 2235531 .. 2235584 -  -4.3  -3.52877   ATGAAGAGATGATAA TTGTTAGCTATCAATTAATAAAATTT AAT AAATCTAATTAATTGATAG-TCTCAA GCAATCGATCGCTAA  52 48
CXD87_RS10840 2234710 .. 2234733 -   -21  -4.32201   CGAAGGAAGGGAAAA          GCCGGCGGCG GCAG CGCCGCCGGC           CAGGCATCAGGCCAG 100 32
CXD87_RS10835 2233026 .. 2233046 -  -8.1  -3.53811   CTGACCGTGCGCAAA            CCCGCCGCC GAC GGCTTCGGG            CTGCACGGCAGCGGC  60 170
CXD87_RS10820 2229227 .. 2229273 - -20.3  -4.87626   GCCGAACAGGAAAAA GCCCGGCTGGTGCCG-TTCCTC ATGG AAGGAATCGCCACCAACCGGGC CATGTTCCAGGCCGA 100 116
CXD87_RS10810 2227993 .. 2228003 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS10800 2226705 .. 2226746 -  -7.9  -3.89354   GGTCGAAACGAACAA TGGCGTGGTGACGCTGACCG GCA CGGTCGGCACCGCCAC-CGA GGCGGATCAAGCAGC  67 268
CXD87_RS10765 2217492 .. 2217527 -   -19  -3.14132   CTGTCCCCGCAGGAA    TCCTGGTGCCTGTCCC CGCT GGGACAGGCACCCGGG     CACTCGGGCACCCGG  90 50
CXD87_RS10755 2215423 .. 2215444 -  -2.1  -2.87132   GGCCGCCCGCAGACA           TGCCCGCGC CGTT ACGCCTGCA            ACAAGGCCCGCAGTT  40 15
CXD87_RS10750 2214125 .. 2214153 - -10.1  -2.77994   CAGAAATTGCAACCA        TTTCCGCGCCGCC CTC GGCGGCGCGCCGA        ACCCGGCCGGCGCTA  57 38
CXD87_RS10745 NONE
CXD87_RS10740 NONE
CXD87_RS10735 2212056 .. 2212071 -  -6.2  -4.83722   AACAGCAGAATAAAA              TTGCAT AACC ATGCAA               CTTGATGCCATAGAC  86 490
CXD87_RS10725 2210633 .. 2210648 -  -8.2   -3.4247   AGAAGCTGAAGAAGA              CCACCG AAGG CGGCGG               CGCGCCGGCGCTGGA  61 343
CXD87_RS10700 2203227 .. 2203237 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS10695 2201806 .. 2201816 -  -2.4  -4.06419   TTTTGCTACAAAGAA                 CCGG CTA CCTG                 TATGCTGACACCCTG  58 432
CXD87_RS10685 NONE
CXD87_RS10680 2198037 .. 2198091 - -15.8  -2.61383   ACCGCTATTGAGAAT GGCCC-TGC--CGCGTCTTGCGCCAGC CGAT GCGGGCGCAAGACGCGAAGCTCAGGCC GTGATGATGTCCAGC  74 19
CXD87_RS10645 2188639 .. 2188658 -  -7.1  -3.42354   CAGGTCAAGGCAGAA            CTGGCCC AGGCCA AGGCCAG             CGGCCAATACACCTT  58 290
CXD87_RS10635 2186695 .. 2186716 - -14.4   -2.6155   CCTGGGAAGACCAAC           GGGCCGCC ATTATA GGCGGCCC            CGCGGCGCGGCCCGG  69 45
CXD87_RS10630 2186358 .. 2186384 -  -7.9  -5.06816   ATTGTCCAAGAAAAA        GCCG-GCGCGCC CGAT GGCGCGCTCAGT         GCGTCAGATGGCGCC  88 21
CXD87_RS10625 2185786 .. 2185797 -  -2.2  -4.05004   GCAGTAGAACAATAA                CGCGG ACG CCG-G                AGAAGGCACGGCACT  58 246
CXD87_RS10620 2185470 .. 2185485 - -11.8  -4.93547   CCAAGCAATGAAAAA              GCCCCC TGGC GGGGGC               TTTTATGGACGCGCT 100 48
CXD87_RS10615 2184612 .. 2184622 -  -3.2  -3.77808   GCGACCAGAACACAA                 GACA CCG CGTC                 GCTTGAAGATCTCGC  56 261
CXD87_RS10610 2184220 .. 2184245 - -16.9  -5.06414   GGCGCGCAACAAAAA         GCCCCACTGCC GCGA GGCAATGGGGC          TTTTTTCATGCGGCC 100 92
CXD87_RS10600 NONE
CXD87_RS10595 2181398 .. 2181424 - -14.4  -3.01924   TATCTCTGGTGAAGA         CGCGCCAGCC GGATGAG GGCCGGCGCG         ATCAACGCTTATCGA  72 78
        clpX 2180013 .. 2180047 - -19.6  -3.05819   CAGATAGCGGGAAGA     TGCAAAAAAACCCGTT ACA AACGGGTTTTCTTGCA     ATGGCGGCCGGGATC 100 46
CXD87_RS10585 2177368 .. 2177392 - -22.9  -5.45726   GATAGCCGAAAAAAA          CCGGGCCCGGA TGA TCCGGGCCCGG          TTTTGCGGGTCGCTG 100 59
CXD87_RS10575 2174872 .. 2174888 -  -7.2  -4.21827   TGAAACACGGGAAAA              CCGCCG GATCG CGGCGA              TGGCGCGCGGGCTCA  72 38
CXD87_RS10570 2173868 .. 2173888 -  -2.4  -3.16564   TTTTCATGGCATCAA            TCCGCCCG TACGC CGAGCGAC            TTGGCCAACGGCACC  42 1
CXD87_RS10565 2173407 .. 2173420 -  -2.3   -2.6563   GCGCTCAATAACGCA               GTTGC ATCA GCCAC                TCGGCCACCATCGCC  38 1
CXD87_RS10560 NONE
CXD87_RS10555 NONE
CXD87_RS10550 NONE
CXD87_RS10545 2170072 .. 2170099 - -11.3   -3.1876   AAGCCCATCCACGAA       CGCGCGC-GCCGG TCGG CCGGCAGCG-GCG        GCAATTCGGCCTTGA  64 125
CXD87_RS10530 NONE
CXD87_RS10525 NONE
CXD87_RS10520 NONE
CXD87_RS10515 2165650 .. 2165666 - -13.7  -3.65812   GGTGGGGCAATACAA              CGTGGCC GCC GGCCACG              CCGCGCTGAAGGCTC  80 47
CXD87_RS10505 2163771 .. 2163800 -    -2  -3.64703   TGCGGGGCATGTAAA       TCCCA-GCGCCGG GGTTG CCGGCGGGCGGCA       GCGGCTGCGCGTGCG  51 392
        uvrB 2158478 .. 2158492 -  -3.5  -2.70932   GCCTGTTTGTAACGA               GCGAA TTTTC TCCGC               TAATTTCCGTCTTTC  41 47
CXD87_RS10480 2157684 .. 2157699 - -11.8  -5.00616   CTCGGTCGGAAAAAA              CCGCGC AGTC GCGCGG               TTTTCTCATTTTGGG 100 96
        iscR NONE
CXD87_RS10470 NONE
        iscU NONE
        iscA NONE
        hscB 2154449 .. 2154469 -  -2.4  -3.32844   CGCGGCACCGCACAA            GCGGGTCA TCGGT TGCCGCGC            ATCGGGCCGGCCGCC  44 81
        hscA NONE
         fdx NONE
        iscX 2151931 .. 2151965 - -24.4  -3.53012   CGCGCGGCCCCGAAA     CGACAAGGGCCCCGTC CAT GACGGGGCCCTTGTCC     GGGCGGCGCGCCGGC 100 48
CXD87_RS10435 2150770 .. 2150804 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS10420 2147878 .. 2147897 - -12.1  -5.60993   CGGGCCATAAAAAAA            CCCCGCG GGGGTT CGCGGGG             CTCAAGCCAAACGCA 100 66
CXD87_RS10410 2145085 .. 2145108 -  -9.4  -3.15249   GATACCGTCGATCAA          GCCGTCGCGC GCCA GCGCGCAGGC           CGTGGTGACGTAGCG  59 364
CXD87_RS10400 2143435 .. 2143459 -  -7.2   -3.4072   GACCTGGCAGGAGAA          GGCGTCAA GAATAGCAG TTGACGCC          GGCCGGCACGAAATG  56 54
CXD87_RS10395 2142550 .. 2142563 -  -2.3  -2.70354   GGGGCTAGAAATCCA               GTTCG ATCT CGACC                GCGTCGCCCACGCGC  38 1
CXD87_RS10390 2142004 .. 2142031 - -10.5  -2.55253   ACGAATCGGAAGTGA        CCGCG-GCGCCC TTGCC GGGCGCGCGCGC        AACGGCCGTCAGGCC  57 34
CXD87_RS10385 2140870 .. 2140912 -  -7.7  -5.59357   ATGACATTAAAAAAA GGGCGGTATCCATTTGCACGC GCC GCGTGTGA--GGATGCCGCCC CGGGTTCCCGCGCCG 100 49
CXD87_RS10380 NONE
CXD87_RS10375 2138102 .. 2138120 - -17.4  -5.78622   GTACGCCAAAAAAAA             CCCGGGCC AGC GGCCCGGG             TCTGTTGCGTCGCCT 100 47
CXD87_RS10360 NONE
CXD87_RS10355 2135198 .. 2135210 -  -6.2  -3.30124   GTTGAGTTGTTATAA                GCGG ACTGA CCGC                TTTCAGCCGGGCGAA  53 28
CXD87_RS10350 2133544 .. 2133601 -  -3.1   -4.2679   GAATTTGCACGAAAA CGATCTCCTACGT-GCTGCGCGGCGCCA TGG CGGCGCCGCGCGGCGACTCAGTTCTTGG ATATTCCCCAGAATA  63 15
CXD87_RS10345 NONE
CXD87_RS10340 NONE
CXD87_RS10335 NONE
CXD87_RS10330 2128732 .. 2128750 - -17.4    -5.252   CATGGCCATAAAAAA             GGCCGGCC AGC GGCCGGCC             CGCAGCGCGTCGCGC 100 42
CXD87_RS10320 NONE
CXD87_RS10315 2124985 .. 2125005 -  -3.2  -2.62616   TCAGGGCCGATACCA           GCGCTGGCA GGAA TGCCC-CGC            TAGGAACGGGAAGTC  39 25
CXD87_RS10310 2124144 .. 2124160 -  -7.9  -3.63991   CACCATGTCGAAGAA              CAGCGCC TGC AGCGCCG              TGCGCCGTTGCGCGG  63 398
CXD87_RS10300 2121671 .. 2121696 -    -6  -4.15044   TCCTGCGTGAAGAAA         CGCCTGCCGA GGCTTA TTGGCTGGCG          TAGAAACTGACCAAT  66 13
CXD87_RS10295 NONE
CXD87_RS10290 2120195 .. 2120226 -  -8.7  -2.94218   ATTTTTGATTATAGA     GGGTCGGCAG-GCCG ATGC CAGCGCCGCCG-CCC      TACTCCTTGCCCGGA  54 25
        alaS NONE
CXD87_RS10280 2117246 .. 2117273 - -21.4  -3.01791   ACGCTCGCGCCAAGA        CAAACGGCCCGC TTGC GCGGGCCGTTTG         CTTGCCGGCAGGCGC 100 41
CXD87_RS10270 2115945 .. 2115963 - -10.2  -4.55295   TTGCGGACAAAGAAA             GCGCTGGC ATA GGCAGCGC             TTTCAAGAAATGCAG  89 139
        rimM NONE
        trmD 2114128 .. 2114140 -  -9.1  -4.08216   CGAGTCGGCCGAAAA                CAGCG TGG CGCTG                CGCTGCGGACTGGCC  72 400
CXD87_RS10220 2107683 .. 2107709 -   -15  -3.17075   GGCGTCTGAACGCAA         GGGCCCCCCGGC GCG GCCGGGGGTTCC         TGCCCATGGCAAGCG  76 85
CXD87_RS10210 NONE
        rlmN NONE
CXD87_RS10200 NONE
CXD87_RS10195 NONE
CXD87_RS10190 NONE
CXD87_RS10185 NONE
        bamB NONE
         der NONE
CXD87_RS10170 2095354 .. 2095368 -  -9.2  -2.52464   GTTTGTTTTAAGTGA               CGGCAC AGT GCGCCG               AAATCAGTACTCTAC  54 118
CXD87_RS10165 2095029 .. 2095058 - -17.2  -4.36595   GAGCCAAAGCGAAAA       TGCCCGCCGGCGC TGGCC GCGC-GGCGGGCA       ATCAAGGGTAATGCT 100 53
        hflX NONE
        hflK NONE
        hflC 2091578 .. 2091607 - -19.3  -4.98531   TGCCCAAACGAAAAA       CGGCTGAGAGGGC GTAA GCCCGCTCAGCCG        TATGCGGAATGTTTT 100 122
CXD87_RS10145 2090302 .. 2090312 -  -6.8  -2.55896   TTTACGAATCAATAT                 CGAG TTT CTCG                 GGAAATCCGGAAATC  47 76
CXD87_RS10140 2088953 .. 2088986 - -18.1   -3.9461   CCTGGCGAATAATAA     CCG-AGGCCGCGCCAC AAC GGGGCGCGGCCCGCGG     CGCCCTACCCCTTGA 100 30
CXD87_RS10135 2088158 .. 2088168 -  -3.2  -3.23452   ATGGCGACAAGCTAA                 GACA ACT TGCC                 GCATCAGTAGCACAG  46 195
CXD87_RS10130 2087814 .. 2087843 -  -6.5  -3.16055   CAAATCCTGGATGAA       TGATTCTGGAATC AATA GATTCGGGAATCA        GGCATCAATACAGGC  51 30
CXD87_RS10125 2085538 .. 2085563 -  -6.1  -4.24002   CCGCAAACCGCAAAA         GGCCATGCGCCG GCC CGGCACATG-CA         TGCCGCCACCCGCCA  70 260
        rpoD NONE
CXD87_RS10115 2082706 .. 2082731 - -16.9  -5.14626   ACCACCAAAACAAAA         CGGGCCTCGGA TTGC TCCGAGACCCG          CATGTTTACTTGGTA 100 36
CXD87_RS10105 2080938 .. 2080954 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD87_RS10085 2078159 .. 2078200 -  -6.3  -3.02511   GCTACCGCCTCAAGA CCTGAACGGCGCGCGCCGGC TCA GCCGGCCGGCGAC-TGCTGG CGCACCCACTGCATG  49 4
CXD87_RS10015 2067260 .. 2067272 -  -3.3  -2.52516   TTGCCGAGGACGAAT                TGCAG GCG CTGCT                GGAGGCGGTGCGGCA  39 62
        bioF NONE
CXD87_RS10000 NONE
        bioD NONE
CXD87_RS09990 2061880 .. 2061890 -  -8.2  -3.53444   CCAGGGTTTCGGAAA                 GGCC CAT GGCC                 ACGGGCGCGGTGACC  62 446
CXD87_RS09975 2060370 .. 2060409 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD87_RS09960 2055708 .. 2055722 -  -5.6  -3.78934   CCCGGGTTAGAAGAA               GCCCAG GGC CTTGGC               GCTGTAGCTCACCAG  60 2
CXD87_RS09945 2052452 .. 2052462 -  -8.2  -3.33162   CAGCGTATTCGAGAA                 CGGC AAT GCCG                 ACGCCACGTTGACCA  59 280
CXD87_RS09935 2050454 .. 2050470 -  -9.3  -2.75481   TGCCAATTCCAACCA              GGGGGCC GCG GGGCCCC              TGCCACCCAGGAGCA  55 392
CXD87_RS09925 2049105 .. 2049131 - -13.6   -3.7795   CCAAAGCCCAGCAAA         TGGCCGCCGGCG CGG CGCTCGCGGCCA         AGCGCGGCGAATCCA  82 280
CXD87_RS09915 2048092 .. 2048119 - -17.8  -3.02144   TTACCGTCGCCAACA        TCGCGGT-GGCGC TGC GCGCCTACCGCGA        AACCACGCTGCGCGA  82 361
CXD87_RS09905 NONE
CXD87_RS09900 2046380 .. 2046393 -  -4.5  -3.02144   GCAGGCGCTCGAAGA               GGTCA TCAC CGACC                TGCAGCGCCGCGGCG  46 208
CXD87_RS09880 2042015 .. 2042025 -  -3.2  -2.78816   CCAGCCCCTACGACA                 GCAC GGT GTAC                 GACCCGCCCAGCTAC  40 329
CXD87_RS09850 2037031 .. 2037046 -  -3.2  -2.52516   GCGTCGACCAGCAAG              GCCG GGCGATGG CGGC               GATCAATATCCGCTG  39 120
CXD87_RS09830 NONE
CXD87_RS09825 2033099 .. 2033127 - -10.2  -3.52073   GCTGCAATACCAGAA        GCAGCTGCGCCT GCACG AGGCGCACCGGC        TGATGGTGGCCGAAA  65 177
CXD87_RS09795 2026966 .. 2026990 -  -2.7  -4.07568   GGCGCCGGCGCAAAA          CAGTGTTGCAG CCG CCGCAATGCCG          TGCCCGCTGGTACGG  59 49
CXD87_RS09790 2025669 .. 2025715 -  -9.6  -3.68222   CGCCAATTCGAACAA GTCGCACGCGCGCCAGGTCG-ACG TGG CGCGCGACCTGGC-C-CG-GCAAC TGGCCGGCGGCGACC  68 224
CXD87_RS09775 2022776 .. 2022817 - -14.3  -3.19513   AGAACGGCAACCTAA CCCCCGGGTGCCTGTCCCC ACAG GGGGACTGGCACCCGCCAA  TTGCTTGCCTGTCCC  73 126
CXD87_RS09765 2020907 .. 2020917 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS09755 2018466 .. 2018494 -  -8.1  -4.10552   TTCCACTAAAGCAAA        TCCGACATGGC ACAGGCG GCCAAGCCGGA        CAACGGCACGCCGGC  69 395
CXD87_RS09745 NONE
CXD87_RS09740 NONE
CXD87_RS09735 NONE
CXD87_RS09730 2014621 .. 2014648 -   -14  -3.02144   GCAGGCCGCCGAACA        CGCCCGTCGGCC GCCA GGCCGCCGCGCG         CGCCAGCGCCGCGTC  72 225
CXD87_RS09720 2012471 .. 2012498 - -10.6   -4.2535   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC  89 104
CXD87_RS09685 2007164 .. 2007198 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS09650 NONE
CXD87_RS09645 1997819 .. 1997868 -  -5.6  -3.29144   GGATGGTGTTGATAA TTGTGCGCGGCCC--CCGCGGGCCG GCG CGGCCCGGTGTCAAGCCGCGC-CGA GTATTGTGATCGAAC  51 12
CXD87_RS09640 NONE
CXD87_RS09635 1995498 .. 1995514 -  -3.6  -3.14344   GAGGTGCTGCACGAA              TGGGGC CTGGC GCCCGA              GCGCGTGGCCGGCGC  45 102
CXD87_RS09600 NONE
CXD87_RS09595 1988207 .. 1988219 -  -3.3  -3.65046   GCCGGAGGGGAAGAA                CAGCG GGG CGATG                GCGATCAGCGCGGCC  53 82
CXD87_RS09585 1986149 .. 1986203 - -12.1  -3.01712   GGCTGGCGGGCAACA GCCACGTGTCGGCCGCGGCCTTGATGG GCG CCACCACGGCGGCGGCC-ATGC-TGGC CGGCGGCCCGGCTTT  67 277
        queF 1983002 .. 1983028 -  -7.9  -2.52464   TGCTGGCGCAATGGA         TCGCGATGCAG GCGCG CCGCACCGCGC         TGAACGCGGCTATTG  49 35
CXD87_RS09500 1966875 .. 1966914 - -11.3  -3.28712   CCTGGGGCTGGAGAA  CCGCCTGGCCGACCGCA TCGGCC TGCTGTCGGGCGGGCAG   CGCCAGGCGGTCAGC  66 387
CXD87_RS09410 1947838 .. 1947857 -  -3.4  -2.82595   TTGAACCACCGAAAC            GCGTGCGG CAAG CCGTAAGC             CACCTCAGGACCTGT  41 175
CXD87_RS09405 NONE
        rpmG 1947107 .. 1947128 - -18.7  -4.86731   CCTTGCCAAATAAAA           CGGCCCCGC CCTG GCGGGGCCG            TTCACCATGGCGCGC 100 68
CXD87_RS09375 1942231 .. 1942261 - -22.6  -3.85698   TCGCCGCCGCATAAA       CGAAGAGCCCGCCG GTG CGGCGGGCTCTGCG       GTTTGACCTGAGACG 100 49
CXD87_RS09370 NONE
CXD87_RS09365 1940391 .. 1940431 -  -2.4  -5.00884   ACTCGTGCGAAAAAA TAGGTAACGGACCGCGCCC GGCA GGGCGCGGGCGGTCAAA-A  CCATCGATTATAGGA  79 45
CXD87_RS09360 NONE
CXD87_RS09355 NONE
CXD87_RS09350 NONE
CXD87_RS09345 NONE
CXD87_RS09340 1934121 .. 1934131 -  -2.4  -3.01712   GCGTTTCCGGGAAGA                 CCTG TGC CTGG                 CGGCGGGCGCCGATA  41 104
CXD87_RS09330 NONE
CXD87_RS09325 NONE
CXD87_RS09320 1930533 .. 1930557 - -13.6  -4.09685   TTTTATTGCTCAAAA         CCCCGC-AGCC TCAC GGCTCGCGGGG          TTTTGTTTTTGGGGG  85 355
CXD87_RS09285 1922752 .. 1922770 -  -8.1  -3.20348   GCGAGTAATAGGCAA             GCGCTGC GAACA GCAGCAC             CCAGATGGCGAAGGT  54 285
CXD87_RS09270 NONE
CXD87_RS09265 NONE
CXD87_RS09260 1917507 .. 1917521 -   -10  -3.33696   GGCTTTTCCAAGCAA               TTCGCC AGC GGCGAA               ACCAGCGGCTACGCC  63 336
CXD87_RS09235 1914179 .. 1914199 -  -4.7  -3.62046   CCATTCGCCCAAGAA           CCTGGCCA TGGCGC TGGCC-GG            CGAGGCCGGCGAGCT  54 285
        acnB 1910610 .. 1910629 - -16.4  -4.91852   CGCAGCAAAAAGAAA            GGCCCGCC TTGC GGCGGGCC             TTTGTCATGGCCGAA 100 48
CXD87_RS09215 NONE
CXD87_RS09210 1909340 .. 1909350 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD87_RS09205 1908202 .. 1908214 -  -4.8  -4.07568   GGGGGCGCCTGAAAA                CTGG GACTA CCAG                GCTGGCAGCCTGACC  63 147
CXD87_RS09185 1904176 .. 1904196 -  -3.8  -4.09864   ATCGATGCGTCAAAA            GTTCCCGC GCGAG GCGGGCGC            CGGGCCGACGTGCTC  61 108
        acnA 1901279 .. 1901302 - -19.6  -5.26875   CGTCCAACGAAAAAA          CCCTCCGGCC AGCA GGCCGGAGGG           TTCGGGTCGCGCAGG 100 59
CXD87_RS09170 1899053 .. 1899073 -    -4  -3.79687   ACGCGGCAGAAAATA           TCGGCG-CGC ATG GCGGCGC-GA           TCCGGTCAGTGGAAC  57 31
        earP 1897900 .. 1897916 -  -2.2  -2.64274   AGGCTGTCAAAGTGA              GGCC TTGAGCACC GGCC              GATCCGGGCAAAGCA  38 60
         efp 1897201 .. 1897220 - -16.4  -5.75342   CCGGGGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG 100 56
CXD87_RS09055 1877039 .. 1877051 -  -5.5   -3.2614   GATGCCCCATACCAA                GCACA AAC CGTGC                CAGCTTTTTTCAAGA  51 256
CXD87_RS09035 1873806 .. 1873859 -  -8.8  -2.82623   CGGGGCGGAGAACGA GTAGGCGGGGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCG--TGCCAACCGTC AATCGTTGACGAAGT  54 24
CXD87_RS08995 1862539 .. 1862581 - -10.5  -3.40403   GGGGCTGGACGACAA GCAGGTGATGCAGGCCGCCC ATGC GCGCGGCGTGC-TCACGCGC GCTGTCGCGCTACTA  65 171
CXD87_RS08985 1859768 .. 1859811 -   -34  -3.06815   ATCCTCCTCAATACA GACGCGGGATGGTGGCGCCC ATGG GGGCGCCCCCATCCCGCGTC GAACGATCCAAACAA 100 41
CXD87_RS08980 1858233 .. 1858256 -   -21  -5.47399   GCAAGGCGAAAAAAA          GGCCGGCGCC CGAA GGCGCCGGCC           TTGCTTGCCCGCGGG 100 47
CXD87_RS08975 1857137 .. 1857167 -  -5.4  -2.71712   TGCTCGCCCTGAAAG      TCAGCCGGC-CCT GCGACG AGGTGCTGGCCGA       GGTCGTGCCCTAGGG  45 107
        pgaA NONE
        pgaB NONE
        pgaC NONE
CXD87_RS08905 1840785 .. 1840799 -  -5.6   -4.1891   CTGGCCGAACAGAAA               CTGTCC AGC GGGCAG               GCCGACCTGGTGGCG  66 180
CXD87_RS08890 NONE
CXD87_RS08885 NONE
CXD87_RS08880 1837992 .. 1838002 -  -2.4  -2.54523   GCAGACTGGAATGCA                 TGGG TTA CCCC                 TGGAGGTGGGTTTTC  38 19
CXD87_RS08875 NONE
CXD87_RS08870 NONE
CXD87_RS08865 NONE
CXD87_RS08860 NONE
CXD87_RS08855 1832363 .. 1832390 - -18.6  -3.11687   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC  90 189
CXD87_RS08820 1825417 .. 1825432 -  -3.2  -4.07568   CCGCGCGGTCGAAAA              GGGC GAGTTGCG GCCC               GATACCCCGGTGGAA  60 198
CXD87_RS08765 1816310 .. 1816331 - -14.5  -4.93696   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 209
CXD87_RS08725 NONE
CXD87_RS08720 1807933 .. 1807943 -  -2.4  -3.06796   CGCCAGCTTATTCAA                 GGAC TTC GGCC                 TTTTCGATGATCACG  41 7
CXD87_RS08715 1806952 .. 1806977 - -19.1  -4.55798   TACGCCAAATGAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 204
CXD87_RS08695 1802590 .. 1802619 - -22.3  -2.62616   CGATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACAC        TGGCCGCCGGAGTGG 100 87
CXD87_RS08685 1800366 .. 1800382 -  -5.7  -3.09803   CAAGGCCAGCGAATA              CCGCGAC AAC GGCACGG              TGGTCAATGTGCGCG  48 194
CXD87_RS08670 1797322 .. 1797354 -  -8.5  -3.61715   CATCCTGTCGAACAA    CCG-CCGCCATGCGCC GTTC GGC-C-TGGCGGGCGG     CGAGGCCGGGGCGAT  63 184
CXD87_RS08650 NONE
CXD87_RS08645 NONE
CXD87_RS08640 1789821 .. 1789832 -  -7.2  -3.27923   GGTGAACAGCAGCAA                GGCC ACCA GGCC                 GCTGGCCACCAGCGC  54 111
CXD87_RS08630 NONE
CXD87_RS08625 1786554 .. 1786573 -  -2.7  -3.58343   CCGACGAGCCGGAAA            CCGCGGC GAAGAT GGCGCAG             CCGATGACGTTGGTG  49 332
CXD87_RS08585 NONE
CXD87_RS08580 1762559 .. 1762576 -  -3.4  -3.73775   CCTATGGCCAGCAAA             GCCTGCA TAGCC TGC-GGC             GGCTGCACCGGGCCG  55 419
CXD87_RS08530 1755517 .. 1755529 -  -3.3  -3.13371   CAGGCCACTAATATA                CCGAA GCG CCCGG                CGAATAAAAATAGCG  44 76
CXD87_RS08525 1754621 .. 1754636 -  -7.5  -3.39895   GTCGGGAGGAACGAA              GCCGG AAACCG CCGGC               GCAAGCGGGCCCAGG  59 133
CXD87_RS08520 NONE
CXD87_RS08515 NONE
CXD87_RS08510 NONE
CXD87_RS08505 NONE
CXD87_RS08500 NONE
CXD87_RS08495 1747920 .. 1747940 - -10.4  -2.70932   GGGCGGGGTGAATCA           GCGCGGCGC GTTG GCGC-GCGC            CACCATGGCGTCGAG  57 2
CXD87_RS08430 1735037 .. 1735047 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS08425 NONE
CXD87_RS08400 1727571 .. 1727601 -  -5.2  -3.14602   TCTAGTCGACCAAGA       CCGGACGCGCTCCC TAG GGGAGCAGGCGCGC       CTTGACCTGCTGCGA  49 8
CXD87_RS08365 1719640 .. 1719650 -  -8.2  -3.21747   GGATGGGAGGAGTAA                 CGCG CTG CGCG                 GGCGCGTCGCGACGC  58 106
CXD87_RS08360 NONE
CXD87_RS08355 1717055 .. 1717069 -  -2.7  -3.75169   GACGACTCCATGAAA               CGGGG ACCGG CCACG               CGGGGCAGGGATTCT  53 39
CXD87_RS08350 1716167 .. 1716201 - -14.9  -3.63515   GCCCATCGGCAAGAA     GGTGGGCCTGGCCAC CGAAC GCGGCATGGCCCACC     TCGTCATCGACGAGC  83 64
CXD87_RS08275 1702381 .. 1702402 -  -3.6  -3.53012   CCCTGGCCGCCGAAA           CCCGCGAC CAGGGC ATCGCGGC            CAACGCGGTGCTGCC  49 205
CXD87_RS08255 NONE
CXD87_RS08250 1697427 .. 1697445 -  -6.7  -3.21416   CATGGCGACGATCAA            CGACCGCA GCGT TGCGG-CG             TCGGGCGGCGTCTTC  52 168
        arsH 1696187 .. 1696197 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 255
CXD87_RS08230 1694721 .. 1694755 - -17.1  -2.66316   CGTCCTACGACATGA    CGCCGCC-GGCCGCCA AGGA CGGCGGCCAGGAGGCG     CCGTGAGCGACGCCC  80 453
CXD87_RS08210 1691316 .. 1691333 -  -4.8  -3.16742   CTCAAGCCGGAGTAA             GGCCGCC GCTCA GGCG-CC             GGGAAACCGCATGGG  47 17
CXD87_RS08190 1687598 .. 1687609 -  -5.8  -2.62184   TGCCCGCTCAGACGA                TGCG CGTG CGCA                 AGGTGCCGATCTGCG  44 6
CXD87_RS08185 NONE
CXD87_RS08180 1685549 .. 1685559 -  -6.8  -2.94912   CCTTGAAGTTATAGA                 GCAG GTT CTGC                 CTGGATGCGCGGCGC  51 59
CXD87_RS08175 NONE
CXD87_RS08170 1683285 .. 1683296 -  -7.2  -3.14132   CCTGGTGCGCACCAA                CCCG CGCA CGGG                 CCGGCGCTCGCTCTA  53 253
CXD87_RS08160 1681708 .. 1681726 - -10.4  -3.68073   CAGTTCATGGAAGAA             TATACGTC ATT GACGTATA             TTTCAATCGCCAGCA  70 109
CXD87_RS08150 1681151 .. 1681176 - -13.3  -2.79831   GCAACCGCCAGCACA         CCGCCAGCG TGGTGCTG CGCTGGCGG          TTCTGAATCGCAGCT  67 45
CXD87_RS08140 NONE
CXD87_RS08135 NONE
CXD87_RS08125 1672979 .. 1673027 -  -7.3  -2.84192   GACATGAGCAGTACA CCCTTGCGGGCCGGGCGCGCGGCG GCGC CGCCGCGCG-CCGAAGCGC--GGC CGCTGGCCGGACTGT  50 439
CXD87_RS08070 1661369 .. 1661382 -  -9.5   -2.5092   GAATATTTTATGAAT               GCGCG CGGC CGCGC                GGCGCGGCCTGGAAG  54 61
CXD87_RS08065 NONE
CXD87_RS08060 1659326 .. 1659351 -  -9.7  -3.24232   CTCCCTTGAAAGACA         CGCTCCTGCCGA TTC TAGGCAGG-GCG         GCGGGCGGATCGGCC  61 120
CXD87_RS08055 1658474 .. 1658484 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS08050 1657443 .. 1657454 -  -5.8  -3.01712   GGCTCGCGCCGAAGA                TCGC GCCG GCGA                 CCGAGCCGACGCCGC  47 41
CXD87_RS08040 NONE
CXD87_RS08035 1655571 .. 1655581 -  -3.2  -4.09685   TCGTACGGGCCAAAA                 CACC TCC GATG                 ACGCGAGTGCCGCGA  59 252
CXD87_RS08030 1654642 .. 1654663 -  -8.7  -3.30771   CGAGAGCGTGCAGAA           CGCCATCGAC CAG GCCGA-GGCG           GTGGCCGACGATATG  58 328
CXD87_RS08020 1652352 .. 1652370 - -12.4  -3.57144   CGCTGCATTGGGAAA             GCGTCGAC GCG GCCGACGC             CGCGGCGGTGCTGGA  74 344
CXD87_RS07950 NONE
CXD87_RS07945 1633013 .. 1633048 -    -9  -4.70266   AACAGCAGGGAAAAA   GA-GGC-CCCGCGCCG TGCCCG CCGCGCGGGCGCCGTC    GTGCTGGACGGGCTT  86 94
CXD87_RS07940 1630692 .. 1630713 - -15.9  -4.77165   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 306
CXD87_RS07920 1627249 .. 1627267 - -10.2  -2.62184   CCTCGCTGGAGACCA             TCCGCCAC ATG GTGGCGGC             CGGGATCGGGGTGAC  55 278
CXD87_RS07885 1618251 .. 1618309 - -12.3  -4.06419   TTCGTGGACAAATAA GGCCGTGCGCCGCCA-GGAAAAGCCGCC TTCG GGCGGTTTTTCTTTGGCCGCGCGCCGGC GCCGTTCATGCGTCG  83 31
CXD87_RS07875 1615994 .. 1616021 - -15.6  -4.59773   TGCTACGGGGAAAAA        TGCAAAGCGGCC GGAT GGCCGCTTTGCC         GACAAACAAGGCAGT 100 107
CXD87_RS07870 NONE
CXD87_RS07865 1613465 .. 1613475 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS07860 1612142 .. 1612153 -  -2.2  -3.21099   CCGCCCGAGCACGAA                GAGCG CGC CGC-C                TACCTGGTCGAGGGG  43 333
CXD87_RS07845 1609334 .. 1609387 - -19.6  -3.01712   CCGGGCGGTCGAACA CCAGCAGGCGGCGGCC-CGGCAGGCCG AAC CGG-CTGCCGCGGCTGCCG-CGGCCGG GACGGCGCCGGCCCC  87 294
CXD87_RS07810 1600461 .. 1600489 - -11.6  -2.65298   GCCACGCAGGAGAAT        GCCGCCATGGCC GAGCA GACCGCGGCGGC        GGCGGCCTCGCTGGA  61 105
CXD87_RS07795 1596290 .. 1596325 - -20.4  -2.84602   GGCACTGCAGTAAAC    CCGCGTGCCTGTCCCC GCAC GGGGACTGGCACGCGC     TGAATCCGGGGTGCC 100 154
CXD87_RS07785 1594264 .. 1594279 -  -6.2  -3.07355   TTGAAACAACAACGA              CTGAAA AGGA TTTCAG               GGGCACCGGTCTATG  49 230
CXD87_RS07780 NONE
CXD87_RS07775 NONE
CXD87_RS07770 1593404 .. 1593416 -  -9.1  -3.28712   GTGCGTGTCCGACAA                GCCGT TGC ACGGC                GAGCTCAAATTGCCC  59 243
CXD87_RS07760 1590744 .. 1590765 -  -7.9  -3.61398   TGTGCTGTTCAACAA           TGCCGGGCGC GGC GCGCC-GGCC           GTGCCCATCGAGGAG  60 501
CXD87_RS07750 NONE
CXD87_RS07745 1588571 .. 1588581 -  -8.2  -4.09685   CCCGAGGGCGGAAAA                 GCCC CCG GGGC                 CAGCAAGCCCTCGCG  72 45
CXD87_RS07740 NONE
CXD87_RS07735 NONE
CXD87_RS07730 1584975 .. 1585001 - -13.6  -3.14132   TCGGGTGGCCAGCAA         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCCATCAAGCCCAAG  72 308
CXD87_RS07700 NONE
        bamC 1578933 .. 1578956 - -18.2  -5.78622   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 66
CXD87_RS07675 1573349 .. 1573377 - -20.3  -3.61398   CTGCGTGTGCAACAA        CTGCGCAACGCGC GCC GCGCGCCGCGCAG        GCCGGCATCAGTCGT 100 33
CXD87_RS07665 NONE
CXD87_RS07660 1570074 .. 1570084 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 72
CXD87_RS07655 NONE
CXD87_RS07650 1567533 .. 1567547 -  -4.2  -3.14931   GCGATTCGGTATCAA               TCCATG CAG CATGGC               CAAACACTCCAAACG  45 52
CXD87_RS07645 NONE
CXD87_RS07640 NONE
CXD87_RS07635 NONE
CXD87_RS07630 1563833 .. 1563858 -  -8.2  -3.40403   GCCGCTGGACGACAA         GGCGGCCGCCG ATGCG CTGCGGC-GCC         TGCGCGGCCTGGACG  61 483
CXD87_RS07620 1562726 .. 1562757 - -14.6  -3.02829   CAGAGGCGGGTAAGA      TCGAATGGCTGTAT GGGC ATACAGCCATTCGC       GCGCCTGGGGCGCAG  74 50
CXD87_RS07615 NONE
CXD87_RS07610 1561045 .. 1561079 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 264
CXD87_RS07565 1548386 .. 1548418 -   -20  -2.64616   CGGGGACGGAGACGA     CGGTGTGCCTGTCCC AGCG GGGACAGGCAC-CCG      CACGGGCAGGCGCCT  95 77
CXD87_RS07560 1546782 .. 1546816 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 201
CXD87_RS07525 1540510 .. 1540551 -  -2.1  -4.01411   TACGAAAAACTCAAA TCCGGATCGTGGATATGCGG GCG CGGCATCGCCGCG-TCCGCA CGCTTACTGTGCCTT  56 29
CXD87_RS07520 1539078 .. 1539100 -  -9.8  -3.28712   CTGGGTGGTGGACAA           CCAGCACGGC GAA ACCGTGCTCG           AACTCGACGCCACCA  63 207
CXD87_RS07435 1525383 .. 1525413 - -19.6  -3.14344   CAGGTGGTGCAGTAA       GGCGGCGACCGGCG CGG CGCCCGGCGCCGCC       CGCCCGCATGGAAAA 100 79
CXD87_RS07420 1522179 .. 1522222 -  -9.4   -3.0127   CGAGGGAATTACAGA TCGCCTGAGCGAGGCAGCGG CGCT CCCCTGCCTGGGTGAGGCGC GCGTCCCCGGTTTCA  57 38
CXD87_RS07415 1520776 .. 1520824 -  -3.5  -3.39449   TCCGAGCAACATGAA GGGCTC-CTTCGCGCGCGCCGC GGCAAG GCCGCGCGCGCGCCGTGCGTCG TGCGCCTCAGCTGGT  49 32
CXD87_RS07410 NONE
CXD87_RS07405 NONE
CXD87_RS07400 1518630 .. 1518650 -  -3.3  -3.35046   GCAGTCTCGGAAAGA            CGGATAT TCCCAAT ATACCCG            TTGCCCGGCGGTCCG  46 59
CXD87_RS07395 1517786 .. 1517820 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 411
CXD87_RS07350 1510652 .. 1510669 -  -8.3  -4.13767   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT  72 151
CXD87_RS07315 NONE
CXD87_RS07310 1502482 .. 1502492 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 383
CXD87_RS07300 1501364 .. 1501398 - -12.9  -2.61582   CAGGGCATTCAGAAG    CG-CGGACCTGGCCTT GTAC AAGGCCAAGGCCGACG     GGCGCAATCGTGTCC  62 105
CXD87_RS07255 1492062 .. 1492081 - -13.6   -5.5112   GGGACCAAGAAAAAA            GCCCCTGA CGGA TCAGGGGC             TTGCAATGTCTGGCG 100 36
CXD87_RS07250 NONE
CXD87_RS07245 NONE
CXD87_RS07240 NONE
CXD87_RS07235 NONE
CXD87_RS07230 NONE
CXD87_RS07225 1484682 .. 1484700 - -13.8  -2.61264   GGCTCCATGGACAAG             GCCGCCCG GAG CGGGCAGC             GGCCTTCCATGATGA  69 111
CXD87_RS07220 1483428 .. 1483445 -  -7.7  -4.18197   AGTGCGTATGGAAAA             CGCCGAA GATG TTCAGCG              TGCCTGGACCTTGGC  74 20
CXD87_RS07215 1481018 .. 1481043 -  -4.7  -5.29846   AACCCGAAAGAAAAA         CCCCGCAGA CGCTCGGT TCTACAGGG          GTTTCCTGGGTATTT  93 107
CXD87_RS07210 1480100 .. 1480111 -  -3.6  -3.12668   CATCTGGAGACCCAA                GCGC ATTT ACGC                 CGGCGTCGGCGCCTG  45 85
CXD87_RS07200 1478821 .. 1478858 -  -9.8  -3.05384   TTTTTCTGGATCGAA   CCGCCGGTCA-TCAGCC AGGAA GGCTGACCGGCCCGCGG   GCCGTTATGCGCCAG  60 30
CXD87_RS07190 1477912 .. 1477949 - -10.5  -2.59742   CGCAATGGCGACAAT   CCGCAACCGCCCGCAGTC CGG GAC-GCCGGCGTTTGCTG   CGTTGCGGCAAATTT  57 153
CXD87_RS07185 1477440 .. 1477459 - -10.6  -5.40072   CGTGCCGCAAAAAAA            GGCCGCCC ATCC GGGCGGCT             TTTTCATTGATTTGC 100 53
        trxB NONE
CXD87_RS07150 NONE
CXD87_RS07145 1468871 .. 1468881 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 77
CXD87_RS07140 1467849 .. 1467888 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD87_RS07135 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 1459105 .. 1459125 -  -6.7   -2.8655   GGCACGCATACTATA            CGCGCGCCG CTT CAGCGCAGG            CGGTCCAGCGCCAGG  50 16
        kdpE 1455387 .. 1455421 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 203
CXD87_RS07070 1449898 .. 1449926 -  -5.8  -3.33261   GCTCAAGGCCTACAA        GCGTGGCGCCGC GGGCA GCGCGGCCACGG        CCAACGTGCGCAAGA  52 186
CXD87_RS07055 1448125 .. 1448138 -  -9.5  -2.75183   AGTGGCAGTCAATGA               GGCGC GACA GCGCC                GAGGCATGATAAGGA  55 87
CXD87_RS07050 NONE
CXD87_RS07045 1445878 .. 1445903 -  -7.5  -3.16881   GATCGACGCCACCAA         CGCCG-GCAGCG TCG CGCTGCACCGCA         AGCTGGGGTTCGTGC  53 148
CXD87_RS07030 1441884 .. 1441913 - -22.3  -2.62616   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 97
CXD87_RS06990 NONE
        recN 1431849 .. 1431889 -  -2.3  -4.75776   AAGCGAACTGAAAAA  CATGGGCCTGAAGGCGACG TTT CCCCGCCTGAAGATCCTTG  ACATTTTTCGTAAAT  76 453
        bamE NONE
CXD87_RS06970 1430064 .. 1430076 -  -4.7  -3.29144   CGATGGCCGCTACAA                GCTGG CCG CCGGC                TGGCTGATCGATCAA  49 263
CXD87_RS06960 1428931 .. 1428952 - -14.5  -5.63236   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 37
CXD87_RS06915 1418345 .. 1418360 -  -3.2  -3.40403   CCCTTCGCAGGACAA              GGCTTC GTGG GAAGTC               GAGAATAGCGTCGCG  48 53
CXD87_RS06910 NONE
CXD87_RS06905 1415836 .. 1415851 -    -4  -3.90588   TATGGGGTAATGAAA              CTTCTGG AAT CC-GAAG              GGGTATCGCTGCGCG  58 426
CXD87_RS06780 1390695 .. 1390727 -  -8.9  -4.07568   GCGCTTTGGCGAAAA      GCCCGCCGACCGCGC CGC GTACGCGCGGCAGGC      CCGCTTCCTGGCGGG  72 179
CXD87_RS06765 1388087 .. 1388137 -  -7.2   -4.0162   GGGCCACAGGAGAAA CAGCGGCGCCAGCATCCAGTCGAG GAT CTCGCCCAGCAGCGAGCGCTGCGG CGGCGCGAAACTCGG  66 105
CXD87_RS06760 1386692 .. 1386707 -    -4  -3.71917   ATCTTAAATTTGAAA              CAATAG GTAA CTATCG               CGCGTACCAGCCCGG  54 61
CXD87_RS06755 1384831 .. 1384859 - -10.9  -4.60041   AGGGAGCTTGAAAAA        GCCGGATTGGCGC AGC GGTCCAACCCGGC        GGGGGATGGTTATCA 100 38
CXD87_RS06710 1376030 .. 1376043 -  -9.5  -2.70932   CTTCTTGTGCAATCA               GGCCC GCGC GGGCC                TAGGAGAGGGCTTCG  55 25
CXD87_RS06705 1374479 .. 1374501 - -19.2  -5.53288   CGCAAGGCAAAAAAA           GGCCCGACAC ATC GTGTCGGGCC           CGTACGGGGCACGCA 100 243
        rdgC 1372764 .. 1372789 -  -6.7  -4.68724   TGATCGAACAGAAAA         GCACG-CTGGCC GAG GGCCTGGCGGGC         GCGGACGTCATTTAC  82 434
CXD87_RS06670 1369694 .. 1369741 - -21.2  -4.15788   AACGTGCTCAAGAAA GGGGCTGAGCAAGGCGGCCGGC AGGC GCCCGCCGGCATGCTCAGCCGC ACTGGCGCTGGATCG 100 18
CXD87_RS06650 1367168 .. 1367226 -  -2.2  -4.33153   GCCAAGATCAACAAA CTGGAGCTGTAG-TCCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGCTTCCTCGGC-CC-G TGCGCGCGTGGACAG  65 78
CXD87_RS06640 1365202 .. 1365212 -  -6.8  -3.03159   CGAACGCGCCCAAGA                 CGCT GCG AGCG                 GTCATTGATTGGGCT  51 121
CXD87_RS06595 1357763 .. 1357797 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS06585 1355401 .. 1355413 -  -3.4   -4.2349   CGCGCAGATCGAAAA                TTCC TCGCT GGAA                CAAGGACTTGTCCAG  63 69
CXD87_RS06575 1353976 .. 1354010 -  -2.1     -3.94   GCAAGCCGTAAACAA    CGGGACGTCCTACGCCA AGC TGGCAT-GGACG-CTAG    GTGTGAACTGTCAAT  56 22
CXD87_RS06550 1350423 .. 1350457 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS06480 NONE
CXD87_RS06455 1331745 .. 1331789 -    -7  -3.67792   GTAGATTCAGGGAAA CCACGGGCACGACCGTCA-CC AAGT GGCTGAATGCCGAGCGCGTGG CGCGCGCCCAGCAGT  64 358
CXD87_RS06445 1329692 .. 1329739 -  -8.4  -2.55544   TCATCACGGAAGTGA CCATCGGCTTCAACTATGCGCTG GGC CAGGTCAC-GGTGACGCCGATGG CGCTGCTGATGACCT  51 224
        sulP 1323995 .. 1324010 -  -3.9  -3.54424   GGTGAGCGCCGGAAA              CAGCC TGACCG GGCCG               GGGCCGCTCGCCAGC  51 379
CXD87_RS06355 1311440 .. 1311453 -  -4.5  -3.54459   CCAAGTCGTCGCAAA               GCC-GG AAT CCTGGC               GACGGCCTGCCACCG  52 57
CXD87_RS06325 1305410 .. 1305431 -  -2.9  -2.65264   CGACCACGCACAGCA           GCATGCC-GT CGT ACTGGCTCGC           CGCCACCTACCGCCT  39 47
CXD87_RS06280 1294567 .. 1294584 -  -4.1  -4.31943   GGTACAGAAAAAAGA             TGAAGCG TCCC CGGTTCA              TGGCGGGCGGCGGGA  68 42
CXD87_RS06275 1293765 .. 1293788 - -16.7   -3.0806   GCGAAATCCGCAAGA          GGCGGCGCG CCGATC CGCGCCGCC           GGCGCGCGGGCCCGG  81 48
CXD87_RS06270 1292468 .. 1292478 -  -2.4   -4.4078   GCTGGCCAACGAAAA                 GCCC CAG GGCC                 AGACCATCGCGTATG  68 83
CXD87_RS06240 1285577 .. 1285600 -  -2.2  -4.07568   TTCGGGGCGGGAAAA          GGGGCTGGGC AGGC GCTCAGGCCG           CGGCGGCGCCTGCCG  58 18
CXD87_RS06235 NONE
CXD87_RS06230 1282859 .. 1282884 - -13.3  -2.57132   GGCGCCCGGGATAAT         CGATACGCCGC TGAC GCGGCACATCG          TGCAGGATCGCCAGG  66 269
CXD87_RS06200 NONE
CXD87_RS06195 1276457 .. 1276494 -  -2.5  -4.58395   CGCACGCTGGAAAAA   GCTGATCGACGAGCGCGG GAT CCGCGCGAATTGA-CGGC   CGCGGCCTCGTGCCG  70 112
CXD87_RS06180 1273275 .. 1273317 -  -3.9  -3.84406   CCGCTATGACAACAA CGATCCGCGCCCCTGGCTGG CCGG CCAGGCAGGCTGGCGGG-CG CGCGCTAATTCGGCC  58 339
        queE 1271197 .. 1271219 -  -4.8  -3.64703   GGCGGGTGACGGAAA           TCATCGCG CATCTCC CGCGATGG           GACGGACAGTCATGG  55 35
        queD 1270492 .. 1270516 -  -7.8  -3.31792   GTACGACGCCCACAA         CATCCCGGCGC TCAA GCGCCTGG-TG          GGGCAGGGCGCCAAG  55 266
CXD87_RS06140 NONE
CXD87_RS06135 1267236 .. 1267253 - -11.3   -4.1822   GCCGAGCCGAAGAAA             GTACCGC CCAG GCGGTAC              ACCGCCTTGGAGCGC  89 192
CXD87_RS06120 1264900 .. 1264927 -  -5.5  -2.53263   GCGATGCGCAATTGA        TCGGCG-CCGAC CTGGT GTCGACCGCCGG        GCAGGGCCGCGTGCA  42 428
CXD87_RS06105 NONE
CXD87_RS06100 NONE
CXD87_RS06095 NONE
CXD87_RS06090 NONE
CXD87_RS06085 1248760 .. 1248774 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
CXD87_RS06075 1246942 .. 1246988 - -12.1  -3.35679   GCGCGTCATCGACAA GCGGCCG-CGCTGATCGCGGCG GGTT CGCAGGGCGCAACGCCGGCCGC CATGGCCGGCGTTGC  73 45
        paaX 1236226 .. 1236251 -  -4.6  -3.62597   CGGACCGGGCAACAA         TGGCGGCGAC GCGCTG GTGGCGGCCA          CGCTGCTGCAGGCGC  54 497
CXD87_RS06000 NONE
        rsgA 1233222 .. 1233246 -  -4.3  -3.78419   GGAGGAAAGATACAA         GGCACC--CCG GGAGT CGGCAGGTGCC         TGTCCTCGTGGGGAC  58 56
CXD87_RS05965 1226702 .. 1226754 -  -7.4  -3.36054   GAAAGCCATAGAACA GGTCGGACGGCAGGTGCAGGCC CTGCGGGTC GGCCTGCGCCAGCAGGCCGCAC GCGGTGGTCTTGCCC  59 151
CXD87_RS05945 1222890 .. 1222917 - -11.2  -3.77119   CATCAACGAATACAA        GCGGCGC-CAGGC CCC GCCCGGGCCCCGC        ATCACGCCGCGCGCG  74 501
        argH 1218397 .. 1218414 -  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 49
CXD87_RS05910 1215495 .. 1215505 -  -8.2  -2.80622   AGATAGTCGATCATA                 GCGC GGC GCGC                 GGCCGGAAATCGCGG  52 10
        moaA 1214025 .. 1214035 -  -4.6  -3.05384   CCGCTGCGCACCGAA                 CGGC CAC GCCA                 GGACAGCCGCGAGGA  46 372
CXD87_RS05875 NONE
CXD87_RS05870 1206795 .. 1206813 - -13.8  -3.05463   AGCCCGCCGACTGAA             CGGCGGCG CTA CGCCGCCA             GGCCGTGCTGGCCGA  72 15
CXD87_RS05860 1205609 .. 1205624 -  -4.6  -3.14404   ACAGCAACTACGTAA              GGCTCA GGCC TGGGCC               AGCATGGTGGCGGCG  47 13
CXD87_RS05855 1204067 .. 1204102 - -13.2  -3.00298   CGTGGTAACTACATA    CCCGGGAGCCTGTCCC AGCG GGGACAGGCTCCCTTT     GCCGCGGCAGTCGCT  70 57
CXD87_RS05840 NONE
CXD87_RS05835 1200436 .. 1200454 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 297
        cadR 1196429 .. 1196439 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS05815 1195407 .. 1195446 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAC CTAG GTGTGAACTGTCAATAGG   TTGTATTTGTCCAGG  64 4
CXD87_RS05810 1194258 .. 1194272 -  -2.7  -3.57144   CCCTGCAGCTGGAAA               TGGCC CTGTC GGCCT               ACATGACCGAGCAAG  50 129
CXD87_RS05770 1186147 .. 1186181 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS05750 1182061 .. 1182071 -  -6.8  -3.40878   ACGAGGCGAACAAGA                 GCTC GGT GAGC                 GTGCCCGACAGCGCG  56 335
CXD87_RS05730 1175705 .. 1175725 -  -8.1  -2.62263   AGTCGGGCGAGATCA            CGCTGTCCG GCC CGGCCCGCG            AGATGCTGCACGATC  48 139
CXD87_RS05655 1151286 .. 1151306 - -15.4  -5.13343   CAATGCAAAATAAAA            GGCGGGGC ATGCA GCCCCGCC            TCAAATAATAACGAC 100 92
CXD87_RS05650 1150689 .. 1150704 - -10.4  -4.62069   CCGGCATGGCAAAAA              GGAGCC TTAG GGCTCC               TTTTTTGCGTTCTGG  93 81
CXD87_RS05620 NONE
CXD87_RS05615 NONE
CXD87_RS05610 1142279 .. 1142305 -   -15  -3.60865   GATTCTAAAGCAGAA         CGCCGGCTGCGC GGG GCGGCGCCGGCG         CGGCCGGGTCAGGGT  81 34
CXD87_RS05605 NONE
CXD87_RS05600 1141197 .. 1141213 -  -2.1  -2.64099   CGGTCCGAGCAGAAT              GAGACGC ATG GGGGCTC              CTGATGGGTTTGTTT  38 108
CXD87_RS05595 1140485 .. 1140543 - -13.8  -3.39895   TTGGCTAGCAATGAA GGCGGGCAGGGCG-CGCG-CGGCCGCGCA CCCC TGCGCGGGCGGCGCGGCGGCCT-CGCGGC GCGGTTTAGCTCTGC  77 31
CXD87_RS05590 1139660 .. 1139688 - -18.2  -2.84602   GCCAGGGTACCAAAG        CAACGTGCCGGC ATCGA GCCGGCACGTCG        GGGGGAGGGATTACT  86 36
        murJ 1138000 .. 1138032 -   -12  -4.20516   TGTCGATCCAATAAA      TGCAAAGACCGGCC GTAAG GGCCGGTCTTTGTT      GTGATTTTCACTATT  91 65
CXD87_RS05580 1136795 .. 1136818 -  -6.8  -3.58037   TATGAATTCGGCAAA          GTCAGACATTG TAT CAA-GTCCGAC          GGGGATTGCAAGCCC  58 74
CXD87_RS05575 1136442 .. 1136459 - -11.3  -5.45802   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTTGCCGTA 100 69
CXD87_RS05555 1133741 .. 1133751 -  -2.4   -3.7941   CATCGTGGAGAACAA                 GGGC GGC GCCA                 ACGGCAATATCGGCT  54 342
CXD87_RS05510 NONE
CXD87_RS05505 1123889 .. 1123901 -  -3.3  -3.07233   TGACAATGGGCAATA                TAGGC TTA GCCGA                TGCTCTTGGCGGCTT  42 18
CXD87_RS05500 1122097 .. 1122116 - -13.6  -5.40072   CGCCGGGCAAAAAAA            GAAGGCCC CGCA GGGCCTTC             TTCCGGCATGGGTGG 100 44
        pdxA NONE
CXD87_RS05490 1119541 .. 1119571 - -11.1  -3.06183   CTCAGCTCGATGGAA      GTGCGCGCCCG-CGC GCG GCGCCTGGCGCGC-C      AGTGCGGGCAGCTGG  62 459
CXD87_RS05430 1109658 .. 1109676 -  -5.8  -3.14931   TCGAGGCGTTAGCAA             GCGTGGCC GAT GGCAGCGC             CGGGCCCGGGCAAGG  49 98
CXD87_RS05425 NONE
CXD87_RS05420 1107069 .. 1107103 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CXD87_RS05395 1101721 .. 1101739 -   -11  -3.55444   CCTTCACGCTGGAAA             CGCTCGAC CTG ATCGAGCG             CCGCATGGGCGAAAT  71 424
CXD87_RS05385 1098975 .. 1099009 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS05360 1092630 .. 1092671 - -26.8  -3.54903   ATATAAAATGGATAA GACCCGATGCGT-GCCGGC AACGG GCCGGCGACGCATCGGGTC GGAAGGGAACGCGCC 100 62
CXD87_RS05355 NONE
CXD87_RS05350 1090831 .. 1090846 -  -3.3  -4.28548   ACGGAGTGATGAAAA              GAATC GTGCGG GATTC               AGCGGTGCGACATGC  63 24
CXD87_RS05345 1089932 .. 1089957 - -20.5  -4.56597   CGGCCGGGTGAAAAA         GCCAAGCCGCC CGAG GGCGGCTTGGC          GGGATGCAGGCCCGG 100 68
CXD87_RS05340 1089729 .. 1089774 -   -28  -5.84381   CCAGCAAGAAAAAAA CCAGCAAGAAAAAAGCCGCT TCCATG AGCGGCTTTTTTCTTGCTGG CCTTGCTTGCTGAAT 100 46
CXD87_RS05335 1088525 .. 1088537 -  -3.3  -4.11216   GCGCGACTCGGAAAA                CCAGC TTA GCTGT                GAACTGTCAATAGGT  59 18
CXD87_RS05330 1087307 .. 1087324 -  -5.5  -3.29144   CCAGCGGCGTCAGAA             CGCCTCT TCGT AGAGTCG              CGTGGCGTCGGCCAG  51 2
CXD87_RS05290 1081124 .. 1081152 -    -3  -3.30441   GAGTATTGGGGACAA       CGCGGCACGGCAC AATT GTGC-GCGGCGAG        AGTTTCGCAGTTTCT  46 101
CXD87_RS05285 1080250 .. 1080267 -  -5.5  -3.15544   GTCCAGCCCCAGCAA             CCGGCCGG CCA CCAGC-GG             CAACTCGATCTAATG  49 490
CXD87_RS05275 NONE
CXD87_RS05270 NONE
CXD87_RS05265 1076258 .. 1076297 -  -6.5  -3.17075   CGGCTCGTAAGGCAA GGCCGTGACATGGCC-GTA CGAA TACAGGCCATCGCACG-CC  TGCGCCTTGCGCATC  51 275
CXD87_RS05255 1074240 .. 1074250 -  -5.4  -3.25823   GCCTGTCTATATGAA                 CTTC ATG GAAG                 CCAGCTCGGAAAACG  51 6
CXD87_RS05250 NONE
CXD87_RS05245 1072121 .. 1072147 - -10.9  -4.52857   ACGTGTCATAGAAAA        CG-GCCAGGACA GCCT CGTCCTGGCGCG         CCAGCCGTCGCGGCC  95 46
        soxR NONE
CXD87_RS05230 1070443 .. 1070468 -  -5.4  -3.34398   GCGCGGGCGCAAAGA         CCGGC-GCACC ATCGG GATACAGCCGG         CAATACTGCCTTACG  51 57
CXD87_RS05225 1068047 .. 1068081 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS05210 1065601 .. 1065617 -  -4.3  -3.14132   CCGCTGCTCTACCAA              CTGAGCT AAC AGCCCGG              CGATTGCTGCCTGTC  47 140
CXD87_RS05205 1065500 .. 1065529 - -17.3   -5.0925   GCCGAAAAGCAAAAA       GGCCGTTAGTGAC TACT ATCACTAACGGCC        TTACAAATCATGGTG 100 36
CXD87_RS05160 NONE
CXD87_RS05155 1058630 .. 1058646 -  -5.8  -3.05596   CATGCCCTGAGCGAA             GGCG-GG CCGG CCGCGCC              GCTGATCACGTATTC  48 332
        panB 1056842 .. 1056857 -  -3.2  -4.07568   TGCCTGTGGCGAAAA              CCCTACG GCG CGC-GGG              AGCGGGTTTGCAGGA  59 253
CXD87_RS05140 1055198 .. 1055232 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 256
CXD87_RS05110 1049297 .. 1049316 -   -10  -3.33261   CCTGAACCGCGACAA            CGT-GGCGG TGG CCGCCGACG            CCATCGCCAGCGTGC  63 72
CXD87_RS05080 NONE
CXD87_RS05075 NONE
CXD87_RS05070 1040549 .. 1040569 -  -8.9  -3.46602   CCGTGGACATCACAA            TGGCGCAGG CGG CCCGCGCAA            GGTTACTCGGTACAA  60 84
CXD87_RS05060 NONE
CXD87_RS05055 1037621 .. 1037643 -  -6.9  -3.35679   CGGCGTGACGCACAA           GGCCGTGGC GCGTT ACCAGGGCC           TGCTGGTCGATGCCT  52 304
CXD87_RS05045 NONE
CXD87_RS05040 1034444 .. 1034466 -  -5.4   -3.7941   CACGGTCTACAAGAA           GCTGATCCGC ATC GCCGACCTGC           ACGACGTCAGCTCGT  58 115
CXD87_RS05025 1031553 .. 1031583 -  -6.8  -3.39784   GGAGCCTGAAGAACA      TGGCCGAGCA-GC ATCCCG GCACGCTCGGCCC       CAGCCTGGTGCGCCA  55 431
        gcvA 1027034 .. 1027076 - -10.5  -3.56092   GGAGCATCGCGCAAA GCGGCGACCTG-ATGGTGGC CATG ACCATCGCGCAGGCCGCCGC GGCGCTCACGCTGCC  67 412
CXD87_RS04985 1023938 .. 1023976 -  -9.6  -3.14132   GGCCTGGCCGAGCAA GTGCG-CCGC-CGCACCGG CATG CCGGTGCGCGCGGTCGG-C  GGCATCGCCGATCCG  59 213
CXD87_RS04975 NONE
CXD87_RS04930 1014694 .. 1014726 -  -3.4  -2.78463   ACCGCTGGCAGGAGA     CCCTCAG-CGGCC TGCCGTTC GACCGGCTGATGG      AGCCGGCCGAAGTGG  40 172
CXD87_RS04880 NONE
CXD87_RS04875 1006158 .. 1006168 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 64
CXD87_RS04870 1004996 .. 1005016 -  -2.4  -2.59267   GGCAAGGACACCAAG            CTGCCCGA TTACG TCGTGCTG            ATCTCGACGCTGGGC  38 163
CXD87_RS04855 NONE
CXD87_RS04850 1001635 .. 1001650 - -10.4  -5.86332   GCAAGGCAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 58
CXD87_RS04835  998887 ..  998906 -   -15   -4.8622   GCCGGCAATGAAAAA            GGCGGCTC ATGC GAGCCGCC             TTTTTCATTGCACGC 100 49
CXD87_RS04815 NONE
CXD87_RS04810  993691 ..  993719 - -14.6  -5.40072   GGCCGGCGAAAAAAA       GCCCCGCTGG-CG TGGT CGTCCAACGGGGC        GGCTGCATGGCGGGC 100 78
CXD87_RS04805  992165 ..  992193 -  -5.2  -3.36569   GGAAGCCGCCAAATA       CATTGACCGCCGC CAGG GCGACGG-CGACG        ACGCCCATGGTGCGC  53 231
CXD87_RS04795  990325 ..  990337 -  -4.7  -3.55622   GGGAACTGCTGGAAA                GCGGC GAG GCCGA                TGCCTGGAGCCTGGA  54 334
CXD87_RS04785  987209 ..  987219 -  -6.8  -3.31144   TCGCCATGGTCAGAA                 CGAC ACC GTCG                 CCGTGGCGTAATAGG  54 9
CXD87_RS04780  985809 ..  985825 -    -5  -3.15544   GGCCATCGTCATGAA              CGCCTC GGGTT GCGGCG              CCATGGTGAAGGAGT  47 489
CXD87_RS04755  967554 ..  967591 - -16.4  -3.61398   TGTCGGTTTCAAGAA   CGGCACCGACGGCAAT GTGAAG ATCGCCGTCGATGCCA    TCAAGGCCGCCTCGC  85 523
CXD87_RS04735  963895 ..  963916 - -18.7  -5.06414   GTGGCGCAATAAAAA           CGGCGCGCC TTGA GGCGCGCCG            GCATTCCGGGACGAA 100 49
CXD87_RS04705  959661 ..  959677 -  -5.7   -3.4277   AGGCAAGACCTACAA              CGAGGCC AAG GACCACG              GGTTCATGTACCAGC  55 128
        chrA  956843 ..  956864 -  -3.6  -4.11216   GGGCCACGTGGAAAA           GCCGCTGCC GGTAT GGC-GCGTC           GTCTACGACGATCCG  63 280
CXD87_RS04670 NONE
CXD87_RS04665 NONE
CXD87_RS04660 NONE
CXD87_RS04655  949813 ..  949832 -  -2.8  -3.23216   GCGCACCACGAGCAA            GGCATAGCC TCG GGC-ATGGC            GTCGACGACGCTGAA  46 280
CXD87_RS04645  948080 ..  948101 - -18.7  -3.28712   TTGGTTCGCCGACAA           CCCCCCGGG CTTG CCCGGGGGG            TTGTCGTTTGTGGCG  93 70
CXD87_RS04590  936722 ..  936733 -  -5.8  -3.01712   GGCCGCGCGCCAAGA                TGGC CATC GCCA                 GCCGCTTCCGTACCC  48 303
CXD87_RS04580  934415 ..  934425 -  -4.6   -4.0371   CATGTTCCATACAAA                 GGCA CGG CGCC                 GGCCATGGTGGACCT  63 455
CXD87_RS04550  930773 ..  930801 -  -5.3  -3.87373   GACAGCGCGGATAAA       CCAT-GCGCCCA TCATGG CGGGCGCAATGA        ATTGTCCAAATGTGC  60 141
CXD87_RS04540  928541 ..  928555 -  -3.5  -3.72576   GCGCGCCCGAGCAAA               CCGAC ATCAG GTCGA               AGCGGCCCTGCGCGC  54 348
CXD87_RS04510  922584 ..  922598 -  -3.5  -3.94746   TGAGATTCAAGCAAA              CGCTGC GCGT GC-GCG               CCCTCCGGCACATTC  59 63
CXD87_RS04505 NONE
CXD87_RS04500  919732 ..  919746 -  -4.2  -3.14931   TTCACGTTCGATGAA               GTGGTC AAC GACGAC               GACACCGTGCTCGAC  45 266
CXD87_RS04460 NONE
CXD87_RS04455  912026 ..  912037 -  -5.8  -3.78022   GGTAGAGGGATGAAA                CAGG AAGG CCTG                 GGACCGCTACTGAAG  60 183
CXD87_RS04445 NONE
CXD87_RS04440 NONE
CXD87_RS04435  908426 ..  908441 -  -8.2  -3.53444   TCACCGCGTTCGAAA              GCGCGG ATAT CCACGC               CGAGGCGCGGCGGCT  61 167
CXD87_RS04415 NONE
CXD87_RS04410 NONE
CXD87_RS04405  902917 ..  902953 -  -5.1  -3.02144   GCAGGGGCTGGAATA    CATAGACGGGCTGGT GCTGTCG ACCAACCGGCCGATG    CTGACACTGATGACG  46 127
CXD87_RS04395  898828 ..  898856 -  -4.4   -3.2614   CACCTTGCAGACCAA       CGCGACGCAGATG GTGC CGGCCGCG-CGCG        GCACCGCGGTGGCCT  47 226
CXD87_RS04370  892953 ..  892988 -   -24  -3.73224   TTAGTTGTTACCAAA    TGCGGCGGGCGCGCCC TGCA AGGCGCGCCCGCCGAA     GTGATCGCTCTGAAT 100 47
CXD87_RS04365 NONE
CXD87_RS04360  888392 ..  888443 - -18.2  -2.83677   AATGAATTCAGCACA GCCATTTGATATGGCCCCCG-CAAC CTC GTCGGCGCGAGCCATTTCAAATGGC GCCGATAGGCGGCCT  86 141
CXD87_RS04355  887660 ..  887682 - -20.6  -4.65895   CGCGGGACGGAAAAA           GCCGCCTGGC GGA GCCAGGCGGC           TTAAGGTGCTGCTAA 100 57
CXD87_RS04350  886698 ..  886735 - -12.5  -2.64155   GCTGGCGGAAATCGA   CGCGGCCCTGCATGCCC TGCC GGGCGTGGCGGGCGGCG    CCTGCGCCGTGCTGC  62 290
         mpl NONE
CXD87_RS04275  873821 ..  873836 -  -2.4  -2.64354   GTACATAGTGAGAAT              CCATCG GGCG CGGCGG               CGTCAGGAGCGCCCC  38 72
CXD87_RS04270  871873 ..  871892 -  -2.7  -2.76468   CAGGATCGAAGAGGA            GGAAGCG GAGCGT CGCACCC             GTGCATTTTAGGGCG  40 61
CXD87_RS04265 NONE
CXD87_RS04260  870086 ..  870096 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS04255 NONE
CXD87_RS04250  868153 ..  868176 -  -5.2  -3.28712   CGGCTCGCCCGACAA          TCCGGGCC TGGTGTTC GGCCTGGA           CCGTGGCGGATGCTG  49 374
CXD87_RS04225  864139 ..  864160 -  -9.3   -4.1891   GGCCGGCAAGATAAA           GCCGCTGGC GGTG GCCGGCGAC            AAGCGCCTGAGCGAC  75 332
CXD87_RS04200  857805 ..  857833 -  -8.7  -3.51032   ATTCGTGAAGCACAA        GATCCTGGACGCC ATC GGCGACCTGTATC        TGCTGGGCAAGCCGC  61 307
CXD87_RS04115  836668 ..  836678 -  -4.6  -3.30771   GCACATGCTCTACAA                 CCGC AAT GCGA                 TTTTCACGGGCGGCG  49 481
CXD87_RS04100  834367 ..  834379 -  -7.7  -2.54523   TGAGACGGGAAGGGA                CGTAC GCC GTACG                CCCTTTGGCCCGATC  50 43
        hppD  825168 ..  825188 -   -14  -3.60151   CGCCCGAAATGACAA            GGCCCACC GCGAG GGTGGGCC            TTACTCGCGCCAGGC  78 46
CXD87_RS04040  821274 ..  821286 -  -9.1  -3.18681   GGGCAAGGTCATCAA                CTGGC GCG GCCAG                GGCGAGGTCGTGCTC  59 384
CXD87_RS04030  819549 ..  819562 -  -5.2  -3.21099   CTGCTCTAGCATCAA               CGCG GTAACT CGCG                CGCAGTATTCATGCA  49 450
CXD87_RS04010  817378 ..  817393 -  -6.1  -5.24129   GGCGGGCACAAAAAA              GGCAC TTGGTG GTGCC               GTTTGGTTTTCTGTA  90 220
CXD87_RS04005  816815 ..  816829 -  -4.2  -2.94411   AGGTTGTCAAACAAT               TCCATG ATT CATGGT               CTCCTTAGTTCATGC  44 30
CXD87_RS04000  815259 ..  815276 - -14.1  -6.11644   CGAGGCAAAAAAAAA             CCGGGCC CGAG GGCCCGG              TTCGCGCCGGCCGGC 100 63
CXD87_RS03995 NONE
CXD87_RS03990  812449 ..  812488 - -26.5  -3.05384   GGCGGCCTGATCGAA  CG-GGCGCCGGCCGCCCG GGCTG CGAGCGGCCGGCGCCGCG  GCCTCAGTCGCGCAG 100 29
CXD87_RS03960  808419 ..  808441 -  -6.8  -2.53911   TGAAGCTGGAATTCA           CCGACGACGG CAT CCGCCGGCTG           GCCGAACTGGCATTC  44 243
CXD87_RS03930 NONE
CXD87_RS03925 NONE
CXD87_RS03920  801178 ..  801234 -  -7.8  -2.91264   GCGTCGATCCACATA TGCGGATGCGCACCGGCGCCGGCCGCCC ACA GCGCGCCCAGCGCC-GT-CAGGGCCGCA AGGCGGCGGCGAGTT  52 15
CXD87_RS03915 NONE
CXD87_RS03910  799593 ..  799605 -  -4.7  -3.23637   AACATATCAATTGAA                TCCGG CAC CCGGG                CGTGCAAAATTCGTC  49 56
CXD87_RS03905  797086 ..  797109 -    -3  -3.85698   GCCGCGCTGGACAAA          TGGTTGCAGG CGCG CCCGCAACTG           GCTGCCGCCGGCGCC  56 362
CXD87_RS03875  791536 ..  791554 - -17.4   -4.4078   CGCGGCCAAGCAAAA             CGCCCCGC CAG GCGGGGCG             TTTCGCGACACGGGA 100 48
CXD87_RS03870  791199 ..  791213 -    -7  -3.08371   GACATGGCCAAGACA               GGCCGC CGT GCGCCC               CTCAGTAGTTGTTGC  52 27
CXD87_RS03865  789864 ..  789897 -    -6  -3.34005   AATGAAGCCGGACAA     CGCGTA-GCACCATG ATCCG CACGGCGCGTACTCG     CCTTTCCCGCTTCAT  53 223
CXD87_RS03860 NONE
CXD87_RS03855 NONE
        metF  787104 ..  787114 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS03845  785972 ..  785984 -  -6.2  -3.01924   GAGCGCCGCCGAACA                GGCC TTTCT GGCC                GCGTTCGAGCGCTTC  48 141
CXD87_RS03820 NONE
CXD87_RS03815  778329 ..  778349 -    -4  -3.57561   GGCGAACTGTTCAAA           GT-GCTGGCC GTG GGCC-GCGAC           ATGCCCGAACCCTTG  51 94
CXD87_RS03795  773029 ..  773068 - -15.6  -2.64099   GGCTCCCAGCAGAAT  GGCGCAGCCGGCCAGCGCC AGC AGCGC-GGCCGCCCGCGCG  CGGGCGGCCCGGATA  74 277
CXD87_RS03790  771537 ..  771550 -  -3.7  -2.62263   AGCGCGCCTACAGCA               GCGGC TCGA GCGGC                AGCAGCGAGAACAGC  40 4
CXD87_RS03765  766884 ..  766926 - -11.9  -3.18681   GGCGAAGCGCAGGAA CCCGCGGCCCGGCCGGCCGGC GAC GCC-GCCACCCGTGC-GCAGG TCCAGGCCGAACTGG  64 354
CXD87_RS03690 NONE
CXD87_RS03685  754059 ..  754073 -  -3.4  -3.96327   ACGGTCGAGGAGAAA               GACCGG GCG CAGGCC               GCCATGAATTTCTGC  58 202
CXD87_RS03675 NONE
CXD87_RS03670  750659 ..  750693 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 280
CXD87_RS03650  744668 ..  744705 -  -7.6  -3.03124   GCTGATTCTTGAACA   CGGCTTGGTTGCCCGCC CAGCC GGCCG-CAACCTCGCCG   TTCCGGTTCAGCCAC  53 33
CXD87_RS03645  742020 ..  742056 - -12.9  -2.72144   CGATTCTTTCGAAAC    CCAGGACCGTCCGCCAG CGC CTGGCGGACTGCGCCAG    CCCTTGGGCATCAAA  67 73
CXD87_RS03635  740573 ..  740587 -  -4.9  -2.88249   GATATTGGTCACATA               GCGGC ACTCG GCCAC               GCCAGGCAGCGGTGT  44 173
CXD87_RS03615  737938 ..  737950 -  -2.6  -4.71426   CGGCGATGAACAAAA                GGCC GCCAA GACC                ACCGCCTTCGACTTG  76 434
CXD87_RS03515 NONE
CXD87_RS03510  716083 ..  716093 -  -8.2  -3.53012   CGCGGCCGGCGCAAA                 GGCC GCC GGCC                 GGGCCCATCGATGCG  62 50
CXD87_RS03505 NONE
CXD87_RS03500  713942 ..  713952 -  -6.8  -3.85817   ACGGTGCCGCAGAAA                 CTGG CGG CCAG                 CGCCGCCCCGCATTT  63 189
CXD87_RS03490  711640 ..  711650 -  -2.4  -4.19238   TTTTGAATCGGAAAA                 TGGC CGG GCCG                 CAATGCCCAACGGCG  62 92
        fahA  710185 ..  710212 - -21.4   -4.8622   GCCCGCAAGGAAAAA        GGTGCCTGTCCC GGTT GGGACAGGCACC         TTCGGCAAGCCGGAG 100 108
CXD87_RS03455 NONE
CXD87_RS03450  700219 ..  700249 -  -3.9  -2.57132   CTGCTGCGCGACAAG       GGCGTGCGG GAATTCGTCGAGG CCGCGCGCC       TGCTGCGCCAGCGCG  40 506
CXD87_RS03395 NONE
CXD87_RS03390 NONE
CXD87_RS03385  685460 ..  685478 -  -4.4  -2.62184   CCTCGCCCGAGATCA             TGGAGCGC GTG GTGCACCA             GGTCATCCGCGAGGG  40 362
CXD87_RS03375  682383 ..  682416 -  -5.1  -3.21099   CGGCTTGAGCACGAA     GGTGTTGCCGCAGGC CAGC GCCACCGGGAACATC      CAGCACGGCACCATC  49 495
CXD87_RS03365  679502 ..  679522 -  -3.8  -3.11459   AATACCAGCATGGAA            CTCCCTCG GGTTG CGCGGGCG            GGCCAGGCCCGCCCT  45 46
CXD87_RS03360 NONE
CXD87_RS03355  677347 ..  677400 - -15.3  -3.01712   TGGGCTCCTGGAACA CCATGGCCATGCGCGTGGCGCGCAG TTCGCG CCGC-CGCCGCGCGC-TGGCCGTGA CGATGTCCTCGCCCA  77 291
CXD87_RS03345  674558 ..  674568 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS03340  673308 ..  673324 -  -2.1  -4.62783   GACGTAGCCGAAAAA              CGGCGGA AAT TCATCCG              GAAACTGGCTAAAAG  70 255
CXD87_RS03290  666082 ..  666122 -   -14  -2.80816   TCGCCAGCCACGATA GCCTGGCAGCT-CAGGCGC GAAT GCGCCTCCAGCCCCCAGGC  GCGGTCCAGCAAGGT  71 268
CXD87_RS03265 NONE
CXD87_RS03260 NONE
CXD87_RS03255 NONE
CXD87_RS03250  659241 ..  659268 -  -8.2  -3.78775   TGCGCCACCAGCAAA        GCCGCGGCCGCC CGCT GGCGGGCGAGGA         CGCCGACAAGGTCAT  67 131
CXD87_RS03175 NONE
CXD87_RS03170 NONE
CXD87_RS03165  641716 ..  641730 -  -7.8  -3.30771   GGACATGGCGCAGAA               CAGGCC GTC GACCTG               CGCCATGGCCAGGCC  56 163
CXD87_RS03155 NONE
CXD87_RS03150  638541 ..  638575 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS03135  634241 ..  634263 -  -4.8  -4.67982   TGCCACCGAAGAAAA           CCAGGCCATA CCC CATGACCTGC           CAGACGGATAAGGCC  75 224
CXD87_RS03125  632148 ..  632171 - -13.8  -2.54702   ACAGACGCGAAGGCA          GCTCGCTGGC CACC GCCAGCGCGC           GCCGGTGCGCACCCA  69 511
CXD87_RS03110  629498 ..  629508 -  -8.2  -3.53012   CTGCGGGCGCTGAAA                 CGGC CGT GCCG                 CGTCACCATCCACAC  61 275
        gloB NONE
CXD87_RS03090  626176 ..  626201 -  -3.3  -2.71712   TTGCCTTGCGGAAAG         GCCGCTA TTGTAGGAATTT TAGCGGC          TTGGCGGACGGGCGC  40 64
        fabI  625300 ..  625328 -    -6  -3.78419   GGAGGAAAGATACAA        GGCACCGG AGGTCGAATTTGG CCGGTGCC        AGTCCCCCTACGGGG  62 57
CXD87_RS03080  624044 ..  624073 - -17.9  -2.62616   CGATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACCC        TCCCTGCGGGGACAG  85 56
CXD87_RS03070  622318 ..  622351 -  -8.9  -3.53091   ACCTGGCCGGCGAAA     TGCTGC-GCCAGGC CAGCGGC GCCTGGTTGCAGCA     CGTGCCGTATCGAGG  61 460
CXD87_RS03050  618570 ..  618580 -  -4.6  -4.12188   TCATCAGGGCGAAAA                 CCGG TAG CCGA                 TGCCCCACACGGTCT  62 3
CXD87_RS03045  617079 ..  617131 - -14.1  -3.33696   GTGTTCGGCAAGGAA CGCCGGCCGGTGCCGCTCTTGCCGCC GCCG GGCGCCT-GA-CGGCG-CGGCCGGCG GGTCAAGCCTTCGCA  75 28
CXD87_RS03030  612748 ..  612785 - -16.9  -3.18274   TGGATTGGAATGGAA   GCGCCGGCCGCCGGCCCG AAG CGGAG-GGCGGCCGGCGA   CAGCGGATTGTCGGG  84 85
        minC  611775 ..  611793 -  -2.4  -3.86346   TTATGTGCGTACAAA             TCGCGTTA TCG TAAAGCAA             AAAGCGTATGAAGGC  54 87
        minD NONE
        minE  610488 ..  610506 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 191
CXD87_RS02965  600155 ..  600174 - -10.6  -5.50499   TTACAGGTAAAAAAA            CCGCTGGC CCTT GCCGGCGG             TTTTTTTATGCGCGG 100 49
        uvrA NONE
CXD87_RS02950 NONE
CXD87_RS02945  592057 ..  592099 - -14.1  -3.07935   ACGGCAGGCACGGAA GTTTGCCGGTGCCAGTCCCC CTGC GGGGACAGGCACCGG-AGTC AGTGGTATTGCACCT  72 24
CXD87_RS02940  590383 ..  590398 -  -2.4  -3.01712   GGCGGGTCGTCAATA              TCGGCA GCCG CGCCGC               GCTGGGCAAGCCCGG  41 437
CXD87_RS02925  587271 ..  587305 -  -5.4  -3.53811   GGGACTGCGGGCAAA     GAGCCGGGCGGCGGAC ATG GTCAGGCGGCAGGCGC     GGCGGCGAGCAAGGC  54 11
CXD87_RS02920  586028 ..  586052 -  -9.1  -3.01712   GCGCCGGCGGCAAGA          CCGACCCGCTG GCG CTGCGCGCCGG          CGACCTGTCCGAAGC  55 524
CXD87_RS02910 NONE
CXD87_RS02905  583334 ..  583351 -  -2.6  -3.05463   ACCGGCTGGATGGAA             GGCTGT CAGTGT ACCGCC              AACGCCGCGCCCGCG  41 52
        pdxH NONE
CXD87_RS02895 NONE
CXD87_RS02890 NONE
        purU  580051 ..  580065 -  -5.6  -3.05384   CGTCCCTGCAGGCAA               CGGCCT TGC AGGCGG               CCTTGCGCCATTTCG  46 65
CXD87_RS02860  574193 ..  574217 - -12.8  -3.65902   GCGATGCCAGTGAAA          CGCGACGCGC CGGAT GCGCGTGGCG          CGAAACTGCACTTGC  77 90
        apaG  567915 ..  567945 - -10.3  -4.13945   ATGCGGATCGGAAAA       TCACCGTGCCGGG AGGAG CCCGGCTCAGTGC       AGTGTACGCGGCATG  78 19
CXD87_RS02820 NONE
CXD87_RS02815  565433 ..  565457 -  -3.4  -3.08032   TGCTCCTGAAAACGA         CGGCC-CGCTC AATT GCGCGAGGCCC          CTTCGATGAGTTGCC  44 9
CXD87_RS02810 NONE
CXD87_RS02805  563394 ..  563428 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 207
CXD87_RS02785  559912 ..  559926 - -11.4  -3.57144   GTGCGCACGCGCAAA               CAGGGC GAG GCCCTG               GCGCTGGCCACCGTG  71 267
CXD87_RS02775  557508 ..  557527 - -16.4  -3.75153   GCGCGCCAATGGAAA            CGCCGCGC ATGC GCGCGGCG             TCGGCAATCGGGCGG  88 81
CXD87_RS02755  554134 ..  554146 -  -3.3  -3.04792   TCACGATGGTTAATA                TCGCT ACG AGCGC                TTGCGCAGCATCAAT  42 16
CXD87_RS02750  553148 ..  553168 - -14.7  -2.52676   GATCTTGCTAACGGA            CGCCCGCCA CCA TGGCGGACG            CCGAAAATTTGGGAT  71 40
CXD87_RS02745 NONE
CXD87_RS02740 NONE
CXD87_RS02735 NONE
CXD87_RS02730  550008 ..  550046 - -12.2  -3.53012   GCTTTCCTGTTGAAA   CGGCTTGGCGGGTTCAGC CGG GCTGTCCCCGCCCTACCG   TAGGATGGGCGGCAC  74 67
CXD87_RS02725 NONE
        atpD NONE
CXD87_RS02715  547149 ..  547176 - -18.6  -2.91924   GGATGCGCCAGAAAC        GACAAAGGCGAC CGAA GTCGCCTTTGTC         TGCCTGACGCGGCGG  89 58
CXD87_RS02710  546064 ..  546093 -  -2.2  -3.09581   CAAAGGGGCAACAGA       CACGACTATCC TTGGTGATC GGA-AGCCGTG       ATTTTACTGCCCTGG  42 74
CXD87_RS02705  544781 ..  544798 -  -4.1  -3.60048   CTTTGGGGAAAAAAC             GCTAACA AGGG TGTGAGC              TTTCAGGGTCGTGCC  51 217
CXD87_RS02700  542553 ..  542579 -  -5.7  -2.62184   TGTTCGGTCAGAGTA        CGGGTTCGAGCG CCGG CGC-CGGCCCCG         CTCAGATCTCCAGCG  44 27
CXD87_RS02695  540424 ..  540434 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS02690  539315 ..  539356 -  -8.5  -3.14132   CTGTCCCTGCACCAA GGGCGTGGGTGCCTGTCCC CGTG GGGACAGGCACCTTGTTCC  CCCCTCCGCAACGCC  56 89
CXD87_RS02640  528194 ..  528206 -  -9.1  -3.33696   GCTGCGCGTAAGCAA                GCGCA TGC TGCGC                CAGGCCGACCGCGCC  59 219
CXD87_RS02625  525797 ..  525811 -  -2.7  -4.21607   TCGAGGGAATATAAA               GTGGG ATGGG CCCGC               GCGGCGTCAGATGCG  63 32
CXD87_RS02620  524615 ..  524629 -  -3.4  -3.78934   CGGCGCGCACAACAA               CGCGGC TGC GCTACG               CGTACGCCTTGAGGG  56 21
CXD87_RS02605  521179 ..  521192 -  -2.3  -3.07935   ATTCTATCCATTGAA               CTACG GGCG CGAAG                AGGCGACATTGTACC  41 184
CXD87_RS02600  521113 ..  521128 -  -4.6  -3.53224   TAGGGCCTTGGGAAA              CTGGCG CGCC CGACAG               GAATCGAACCTGTAT  52 11
CXD87_RS02595  520015 ..  520025 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS02590  518846 ..  518868 -  -5.5  -3.15579   GCAACCGGGGAGCAA          GGCGCACGCC GGCC GACGC-CGCC           ACGGCGCATGGGCAG  49 168
CXD87_RS02585 NONE
CXD87_RS02580 NONE
CXD87_RS02575  515297 ..  515333 - -10.9  -3.15544   TTCGACGCCGACGAA   GCGCGGCGCA-TCG-GC TTCGT GCGCGACTGCGCCGCCC   AGGCGCAGTGGCCCG  64 217
CXD87_RS02555  511897 ..  511949 - -27.1  -3.02144   CCAGGCGCTCGAAGA CGCCGCCTGAAGCGCGGCGGCCGC CAGCCC GCG-CCGCCGTGCTTCAGCCGGCG TTGGGCGCGGCCCAG 100 16
CXD87_RS02540 NONE
CXD87_RS02535  507338 ..  507367 - -11.3  -2.62263   ACGTCGCCGACACCA       GCGCCATCCAGCG CACC CGCTGGCCGGCGT        CGGGAAACAGGTCCG  59 509
CXD87_RS02525  505020 ..  505072 -  -9.2  -3.04501   ATCAATTCCGCAAGA GCCTCATGCAG--GCCGCCGCGCGCG GCGTG CGCGTGCGGCTGCTACTGCA-G-GGC AAGCCCGAATACCGC  55 403
CXD87_RS02470 NONE
CXD87_RS02465 NONE
        lptC NONE
        lptA NONE
        lptB  489591 ..  489606 -  -3.2  -3.66288   TATTGGCCAATACAA              GTTGCG CTAG CGCAAG               ATTGTGTACGTTTGA  53 108
CXD87_RS02440 NONE
CXD87_RS02435  487323 ..  487335 -  -4.7  -2.71144   CAGCTGGGGCAACCA                GGCCG GCG CGGTC                ACGCCGCTGGACGTG  43 127
        rapZ NONE
CXD87_RS02415  483302 ..  483312 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS02410  481848 ..  481882 -   -10  -3.41229   ATAGTTCGAGCAGAA    CCTGGCGCGC-TCGC TCAGCG GCGAGGCGCAGCAGG     ACCCGGCGCAACCGG  65 441
CXD87_RS02350  470862 ..  470883 -  -7.3  -4.61873   GCGCACAAATGAAAA           TGCCCAG TGCAAGGG CTGGGCA            TCGAATTCTTGGTGG  79 35
CXD87_RS02305 NONE
CXD87_RS02300  455346 ..  455401 -  -7.4  -4.18197   AGGCGTGATCGAAAA GCA-GGTGGCCATCGTCGCGCCGGCCA AGG TGGGCAGCACGCTGACGGCCATCGTGG AAATCACGCTGGACG  73 304
        glmS  452845 ..  452883 -  -8.1  -2.56715   ACCTGGACGAATGCA  CCATCGGGCGCGACAAGGC CGT GCAGCG-CGCG-CCGATGG  ATATCGCCCGCCTGC  48 330
CXD87_RS02270 NONE
CXD87_RS02265  446591 ..  446645 - -20.2  -2.50779   ATGACAAGCCAACAG CATGCCGGCG-GC--GCGTCGCGGCAA GGCC TTGCCGCGACGCATGCGCGCCAGCCTG GGCCGCCTACTGTCA  95 38
CXD87_RS02260  445131 ..  445142 -  -7.2  -3.51934   GCCCCTGCAGAAAGA                GCGC TGGA GCGC                 GGCGGTCGATGTGGT  58 449
CXD87_RS02250 NONE
CXD87_RS02245 NONE
CXD87_RS02240 NONE
        argE  440453 ..  440502 -    -2  -3.50133   TAGTTGTAGAAAAAG CGCCACCGTCATGGA--CCGGACC CGAA AGCCCGGCGTTCGTGACGGGGGGG TACATCACCACTACC  48 74
CXD87_RS02230  439368 ..  439392 -   -20   -3.3514   ACCGACACGGCACAA          CGGGCGCCCG GGCCG CGGGCGCCCG          CCGCGATCAGTCGAT 100 32
CXD87_RS02225  438034 ..  438051 -  -5.5  -2.71712   GCCTCTCGCTCAAAG             TCCCAGG ATGG CCTTGGA              AATGATGTTCTTCTG  45 2
CXD87_RS02220  436723 ..  436742 -  -3.4  -3.65812   CCCCGCCGAACACAA            CGTCGGCC ACCT GTACGACG             CCAAGCCCGAACTGA  51 167
CXD87_RS02205  432799 ..  432809 -  -8.2  -3.35813   GGTGATGGGAACGAA                 GCGC TCG GCGC                 CGAAGAAGTTGCCGA  60 176
CXD87_RS02195 NONE
CXD87_RS02190  431069 ..  431103 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS02175  427078 ..  427095 -  -3.3  -3.08464   CTACCACTGAGCTAA             CCACCCC GAAA GAGGCGA              AATTCTAGCACGAAA  44 73
CXD87_RS02170  426966 ..  427000 - -19.5  -3.54489   GGAAGCGGAAATGAA    GAAGGGCCGGT-GCTT TTGC AAGCGACCGGCCCTTC     TGGGATGCTGGTGGG 100 34
CXD87_RS02165  426452 ..  426478 - -11.5  -2.78384   CGTTGTTCGACGATA         GCCCAGGCCTG GCGCA CAGGCCCGGGG         ATGCGCACAGACAGC  62 101
CXD87_RS02160  425002 ..  425047 -  -7.4  -3.86822   GAAGCCTTCGAGAAA CTGGGCGCGCCGCC--CCTGCC CGAG GGCAGGTAGGCGGCTGGCGCCG GGCTAGAAGAAGCTC  66 28
CXD87_RS02135 NONE
CXD87_RS02130 NONE
CXD87_RS02120 NONE
CXD87_RS02115  415915 ..  415952 - -14.7  -3.15699   ACGCATCTATGAAGA   TGCCGTGGCCGACTTCG TACG CGACGCCGGCCGCGGCT    ATGCCGGCCGCCAGG  77 87
CXD87_RS02090  412343 ..  412370 -  -3.9  -2.78996   CATCCTGATCGAAAT        GGGCAGGCCCG TCTGCG CGCGCCGTCCC         GCGAACCGCCGCTGC  41 41
CXD87_RS02085  411264 ..  411302 -   -13  -3.52093   ATATTGGAACCATAA   TCCGCGGCACCCGGCCCA TAT TGCATCCGGCGCCGCGGA   TTGCGGGCGGGCCAT  77 53
CXD87_RS02080 NONE
CXD87_RS02075 NONE
CXD87_RS02070  407557 ..  407567 -  -5.4  -2.94924   CCTGGATGGAGAAAG                 CTCT ACC AGAG                 GCTCATTCCTTGTAC  47 28
CXD87_RS02065 NONE
CXD87_RS02060  404868 ..  404896 - -11.7  -3.81755   ACGCGTGAAACAGAA        GCAGGGTGTTCAC GAT GTGAACACCCAGG        GACGGGCGCCGGCTT  79 59
CXD87_RS02055 NONE
CXD87_RS02050 NONE
CXD87_RS02045  401582 ..  401598 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  60 494
CXD87_RS02030  398645 ..  398669 -  -9.2  -3.64822   ACCGGTGTAGCCAAA         GCGGGCCAGCG TCTG CGC-GGCCAGC          CGCGCGCGCGGGTCG  68 347
CXD87_RS02020 NONE
CXD87_RS02015 NONE
CXD87_RS02010  394113 ..  394169 -  -6.6  -3.14051   TTATTTCCAGGAACA CCCG--CATCCCACCGAAGGCACGAT ACGCACG ACCGCGCCGCCGGTCGAATGGTCGGG CACGCCCGGCGGGTA  50 237
CXD87_RS01990  390721 ..  390731 -  -3.2  -2.78816   TCATCGGCCATGACA                 CATC GCT GACG                 GGGTTTGGCGGCGGG  40 151
CXD87_RS01975 NONE
CXD87_RS01970 NONE
CXD87_RS01965 NONE
CXD87_RS01960  386499 ..  386511 -  -3.3   -3.6968   CGAGAACCCCAAGAA                GCTGA AGT TCCGC                GAACTGGAAGCCGCC  55 436
        argB NONE
CXD87_RS01945  384076 ..  384108 - -11.9  -3.09635   AGGTGGAGTAGGGAA      CCCGTCGTCAGCCGC GCA GCGGGCGACGACGCA      ACAGCAAATCACTGA  66 0
        slmA NONE
CXD87_RS01935 NONE
CXD87_RS01930 NONE
        gatC NONE
        gatA NONE
        gatB  371106 ..  371124 - -10.2  -2.62515   AATCGGTCGAGATCA             TCCGCGCC GCC GGCGCCGA             GCCCGCCGCGGTGCT  55 359
         xth  369445 ..  369456 -  -7.2  -4.25104   TTCGTCGGACGAAAA                GCCG GAAT CGGC                 CGCAAAACCAGTGCT  72 313
CXD87_RS01875  367661 ..  367690 -   -18  -3.93262   CCCAACAAATGGAAA       TGCCGCTGACCA TCGTGC TGGTCAGCGGCA        TGATCACCGGGTGCG 100 313
CXD87_RS01860  365002 ..  365045 - -11.6  -3.15544   GGTCAGGCGCATCAA GACCGGCG-CCGGCGCGCA TGCGTTC CGCGCGCAGGGCGACGGCC GCCATCTGTTCGTCA  64 284
CXD87_RS01820 NONE
CXD87_RS01815  355922 ..  355932 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CXD87_RS01810  354701 ..  354745 -    -4  -2.78463   AGTGGCGCGAGCAGA CGCTGTCCGAAGCGGGCGAC CTGGT GCTGGCCGCGCCGGATACCG GCCTGGACGCCAAAG  40 198
CXD87_RS01785  352407 ..  352441 -    -4   -4.9792   CATTTTAGATAAAAA     CCGCGCGCATGCAACC GGT GCCTGCCGGCGCGCCA     GCGCCGACGGCCCGC  79 115
CXD87_RS01780 NONE
CXD87_RS01775  350787 ..  350800 -  -2.3  -2.64616   TTCCCATCGAGAGCA               GGCAC GAGC GTGCT                TGTGCTGTCGATGAC  38 120
CXD87_RS01770 NONE
CXD87_RS01765 NONE
CXD87_RS01760  346115 ..  346167 - -16.2  -3.05844   TCGGCCAGCGGAATA TGCACCGCGCCGCTGGCGGCGG CGAGAATGC CCACCGCCAGCAGGGCAGCGCC CAGCGCCAGCAGCAG  79 60
CXD87_RS01755 NONE
CXD87_RS01750  344397 ..  344422 - -11.9  -3.57144   TGCGCCACCTCGAAA         CCGGCGC-CTGA GGT TCAGCGCGCCAG         CACCAGCAGGCGGCC  72 14
CXD87_RS01740 NONE
        alkB  342381 ..  342397 -  -9.3  -2.52464   TTGCGGCCGAATTCA              GGCGCCG GCG CGGCGCA              GCGTGAAGTTGATGC  54 6
CXD87_RS01730  341766 ..  341776 -  -8.2  -3.53012   TGCCGGCGTTGCAAA                 CGGC TCA GCCG                 GCCTCGCGCAACAGC  62 19
CXD87_RS01725  340195 ..  340212 - -12.7  -3.06915   AGGGACGCTACGCAA             GCCGGCT GGTC AGCCGGC              CCGAGCATCGCGACG  66 346
CXD87_RS01700 NONE
CXD87_RS01695  336060 ..  336074 -  -8.5  -2.56596   GTCGGGAGCAATCTA               CGCGG GTCGG CCGCG               CGCTGTCTGTTTACT  52 64
CXD87_RS01690 NONE
CXD87_RS01685 NONE
CXD87_RS01680 NONE
CXD87_RS01675 NONE
CXD87_RS01670  331131 ..  331165 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS01660 NONE
        lptG NONE
CXD87_RS01650  326931 ..  326943 -  -4.7  -3.01712   CGTTCGTGGCCAAGA                GCGAG ATC CGCGC                CTGGCCGGTCATCGG  46 510
CXD87_RS01615 NONE
CXD87_RS01610 NONE
CXD87_RS01605  320168 ..  320206 - -10.2  -5.80951   ATCCAAAACAAAAAA   GTGAAGCCCATCGGATCG TAA CAATCCGATGGGCCGGGC   CCTGCCCGTCGCGGC 100 45
CXD87_RS01600  317858 ..  317870 -  -2.7  -2.80074   GTTTTTACAAGAGGA                TCCAT GAC ATGAA                AATTCTGCAACCGCC  39 516
CXD87_RS01535 NONE
CXD87_RS01530  304026 ..  304042 -  -9.3   -2.7185   ATCATGGTGGAATTA              TGCGCCG GGC CGGCGCC              GGCGTGGCCGGCCTG  55 41
CXD87_RS01525  302817 ..  302851 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD87_RS01515  301662 ..  301677 - -11.8   -5.4505   TTGGCCAACAAAAAA              GCCGCC CGGA GGCGGC               TGGAAGGTCGGCTTC 100 42
CXD87_RS01510 NONE
CXD87_RS01505  299715 ..  299738 -  -3.1  -3.51934   CCTGGCTGAGAAACA          TCG-AGCCGA ACTTG CCGGCCCCGA          TCAACGCCACCCGCA  49 219
CXD87_RS01490 NONE
CXD87_RS01475  292129 ..  292159 -  -8.8  -2.66316   GCGGCGAGCAGATCA       CCGCCGTGGCGCTG GAC CTGGGCTACGGCAG       CCCGGGCGCCTTCAC  51 151
CXD87_RS01465 NONE
CXD87_RS01460 NONE
CXD87_RS01455 NONE
CXD87_RS01450  286977 ..  286987 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS01445  285622 ..  285650 -    -6  -3.08679   CCGCGTGATGGAAGA       CATCGTGCGCACGG GCG CCGTGCGG-CG-TG       GCTGGTTCGGCATCG  48 348
CXD87_RS01435  283895 ..  283921 -  -7.9  -3.23853   CCGCCGCAAGGAAGA        GGCCGCGCCGGA AGCG CCCGCCGC-GCC         GCCGGAAGATGTCAC  53 114
        petA NONE
CXD87_RS01420 NONE
CXD87_RS01415  280296 ..  280327 - -18.8  -3.94846   GTATGAAAAGCGAAA      GGCCAGCGCC-GCCA AAT TAGCAGGCGCTGGCC      CCGATTGCCAGGCGG 100 123
CXD87_RS01410 NONE
CXD87_RS01405  279124 ..  279148 - -17.2  -3.16191   CTACACCGGCATGAA          CGCAAGCGGC GCATG GCCGCTTGCG          AGGGACTGCATTGTA  84 73
CXD87_RS01400  279004 ..  279024 - -13.3  -5.07011   TACATAAACGAAAAA            GCCGTCTCC AGA GGAAACGGC            CTAGATCGTTGATTT 100 44
CXD87_RS01385 NONE
CXD87_RS01380  276754 ..  276793 -  -8.6  -3.02144   TCAGCGCCGCCAACA  CCATGCGCCTGG-ACAACA TGG TGCTGTACCAGACGCCCAG  CCTGGATGGTTTCAA  55 372
CXD87_RS01310 NONE
CXD87_RS01305  262544 ..  262559 -    -6  -4.07618   GCCGCAACAAGGAAA              CCGAGC TCGA GCGCGG               CACGGCGCTGGAAGC  66 190
CXD87_RS01295  259920 ..  259935 - -11.8  -3.57144   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC  72 46
CXD87_RS01285  257763 ..  257785 - -12.7  -3.24747   GGGCGACATGACCAA          CGCGCGCCGC TAGA GCGGCGC-CG           GGCGCGTCAGTTGGG  71 32
CXD87_RS01275 NONE
CXD87_RS01270  254241 ..  254278 -    -9  -3.35679   CGCGGGCAGTGAGAA   GCGGGCGCCCGTCCCC GTTGGG GAGGAGCGACACCCGC    GGCAAGGGTGCCTGT  63 127
        mutL NONE
        miaA  250651 ..  250680 - -23.7  -2.78816   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 30
CXD87_RS01245 NONE
CXD87_RS01240 NONE
        pcnB NONE
CXD87_RS01230  245860 ..  245873 -  -4.5  -3.38326   CAGAAGCTGAACGAA               GCGTCG GCG CG-CGC               GCTGAACACGCCGGC  49 189
CXD87_RS01210  240287 ..  240318 - -15.9  -3.76413   TTGCAAAATGGGAAA      GGCATCCGGTGCG TGCGAG CGCACCGGACACC       ATTGGACGGCCTGCG  90 42
CXD87_RS01205  239306 ..  239316 -  -2.4  -3.29144   CGACCTGGCGCACAA                 GGAC CTG GGCC                 TGGCGCTCGAACTGG  44 257
CXD87_RS01185  236324 ..  236334 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS01180  235203 ..  235217 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
        thiC  229270 ..  229284 -  -8.5  -3.02263   ACACCTCGGTCAAGA               CCGCC TACAC GGCGG               CCTGACCCGCATGGC  55 72
CXD87_RS01135 NONE
CXD87_RS01130  224033 ..  224082 -  -9.8  -2.82015   GCCATAGGCAGCATA TCGGCGACGGCGGCGCC--GCGGA TTTT CCCGCTTGGCGCGGCCGACGCGGC GCCGGTAGGCATCGC  56 396
CXD87_RS01120  222471 ..  222483 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTACCCGGACTGCCG  50 368
CXD87_RS01110  218814 ..  218842 -  -2.3  -4.92756   ATGATCAAAAACAAA        TCATCCTGGGACG CAG CGCCTCAAAATGT        TGGGAGGCTTCCGGG  76 237
CXD87_RS01105  215550 ..  215579 - -23.7  -2.78816   TCATGGCGCATGACA       GAGCGCCTGTCCC CGTG GGGACAGGCGCTC        TTGCCGCTGGTGTCG 100 111
CXD87_RS01100 NONE
CXD87_RS01095  212802 ..  212815 -  -3.7  -3.33696   GGGCTCCGTAAGGAA               GGCGC GGCG GCGTC                AGTGGGTCAGGTAAC  47 24
CXD87_RS01090  211988 ..  212021 - -12.4  -2.82519   CGAGCACATCAACCA    GGCGCTGCGGCGCCGC TGAG GCGGCGC-GC-GCGCG     ATGCGCGAGCAGGCG  66 61
CXD87_RS01080 NONE
CXD87_RS01075  209663 ..  209683 - -19.7  -4.11216   CTTCGATCGGTAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGGCGTTCAG 100 37
        catC NONE
CXD87_RS01065 NONE
        pcaD NONE
CXD87_RS01055  206873 ..  206885 -  -4.7  -3.73068   GGCCGAATGCAACAA                GTCGG CAA CCGGC                AAGACCGGCGACGAG  58 310
CXD87_RS01025  201801 ..  201811 -  -8.2  -3.28712   GGCGCGGGTGGACAA                 CGCC TAT GGCG                 ACCGCAACCTGGTGT  59 217
CXD87_RS00975 NONE
CXD87_RS00970 NONE
CXD87_RS00965  188273 ..  188285 -  -4.8  -3.41051   GCAGTTCGACGAGAA                GTCG TTCGT CGAC                TTCAAGGGCGATGTC  52 372
CXD87_RS00940  180908 ..  180937 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGT GCCACGGCGGCGCT       GCAGGGGCCGGCGGG  91 50
CXD87_RS00935  178599 ..  178625 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GTG GCGGGCCGGCGG         CGGCGCGCTCAGCGC 100 34
         bfr  173559 ..  173580 - -17.3  -3.75629   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG  91 63
CXD87_RS00875 NONE
CXD87_RS00870  166927 ..  166982 -  -6.7  -3.15544   CGCTATCCGCACGAA TTCTCCGGCGGCCAGCGCCAGCGC-AT CTGC ATCGCGCGCGCGCTGGCCACCCG-GCC GCGCTTCCTGATCTG  52 330
CXD87_RS00860  164534 ..  164591 -  -2.7  -4.11484   CTGAACTCTTCAAAA CCATGGAAGCGGTGCGCTGGAATAT-GG CGT CCGATATCCCATGGGACGACTTCGACGG CAGCAAGCTGTCGGA  59 327
        phoB NONE
        phoR NONE
CXD87_RS00820 NONE
CXD87_RS00815  155622 ..  155649 -  -2.7  -2.66316   CGGCCGACGATAGCA       GGGCG--GGACTG ACCT CAGTCTGTCGCCC        GGATTACGCGTTTGT  39 12
CXD87_RS00810  154986 ..  154998 -  -7.7  -3.78934   TTGCCTGTACAACAA                GGGTT GAA AACCC                CCCCCCCATTGTGGA  66 96
CXD87_RS00805  153494 ..  153509 -  -3.2  -3.73775   TCGAGCTCGACGAAA              TCGACG CCAT CGCCAA               CCTGGTGCGCCACGG  55 281
CXD87_RS00795 NONE
        pxpB NONE
CXD87_RS00785  150084 ..  150106 -    -9  -3.01712   TCCGGTCGGCGAAGA           CTTCCTGCGC CGC GCGCAGGCCG           ATGGCGCGGGCAGCG  57 495
CXD87_RS00770  147840 ..  147852 -  -5.5  -3.01712   GCGGCGCCGCCAATA                CCGCA TCC TGCGA                TGATGACTCGCATAG  47 110
CXD87_RS00760 NONE
CXD87_RS00755 NONE
CXD87_RS00750  143526 ..  143567 -  -9.2  -3.72027   AGCGCCTACGAACAA TGGGCGGGCGACGC-CGGC GACGA GCCGGGCGACGACCGCCTG CGCGTCGCGTAGGCC  68 125
        ilvA  136162 ..  136172 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 380
CXD87_RS00720 NONE
CXD87_RS00710  132734 ..  132774 -  -8.8  -3.05715   AATGCCGTTACCGAA CGCCAAGTCCGCGCCTGCG TGGA CGCGGGCGCGG-CTACGCT  GGGCGATCTCCAGTT  55 264
CXD87_RS00695  130456 ..  130475 - -16.4  -3.85165   CAGCGCAAATGTAAA            CGGCGCGC CAGG GCGCGCCG             TCAGGCCGGTCCGGG  91 55
        leuA  128020 ..  128048 - -16.7   -3.1372   GACCGCCGAGCAATA        CCTGGCCCACCTG GCG CAGGCGGGGCAGG        CGCGCGCGAAAGTGG  80 355
CXD87_RS00675 NONE
CXD87_RS00670  124695 ..  124739 - -17.8  -3.19653   CCAGAAGGCCAGGAA CAGCGCCGCGGCCGGC-GCAG CGAA CAACAGCCATCCGCGGCGCTG CATATCAATTCACCT  86 30
CXD87_RS00660 NONE
CXD87_RS00655  122127 ..  122137 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD87_RS00650  121049 ..  121077 -  -2.9  -3.30701   TTCCAGGAAATTCAA        TGGGCCGCCAGCA CCA CGCTGACGGACTG        GCCGGTCTGATAGGT  46 71
CXD87_RS00645  120173 ..  120194 - -10.8  -2.84325   GCGGTGCAAACATGA           CGCCGCCA TGTCAG CGGCGGCG            CTTGTTTCACTCGTC  61 32
CXD87_RS00640  119063 ..  119077 - -12.8  -3.48276   CGGTGGTTCACAGAA               CCGCCG CGT CGGCGG               CGAAGAAATGCTGTC  73 3
CXD87_RS00635 NONE
CXD87_RS00630 NONE
CXD87_RS00625  115862 ..  115880 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 182
CXD87_RS00605 NONE
CXD87_RS00600  111212 ..  111226 -    -7  -2.90714   TTAAAGCGTTACAGA               CTGCGG ATG CCGCGG               GGAAGTTCCATGGCG  50 43
CXD87_RS00595  110499 ..  110518 - -11.4  -4.08144   CCCATCAACGACAAA            GCCTCCGC ATGG ACGGAGGC             TTTGTGGCGTCGGGG  82 60
CXD87_RS00580 NONE
        rfbB NONE
        rfbD NONE
        rfbC  104821 ..  104856 - -16.1  -3.14878   GGCGTCAACTGAAGA    CGCGCGGGCCGCTAC GCATAG GTATCGGCCCGCGCC     AGCGCCACGCCCTGG  81 1
CXD87_RS00510 NONE
CXD87_RS00505 NONE
CXD87_RS00500   94077 ..   94110 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATT GCGGCGGGGGCGGCG      CTGCGTGCGCCCGAC  52 204
CXD87_RS00485 NONE
CXD87_RS00480 NONE
CXD87_RS00475 NONE
CXD87_RS00470 NONE
CXD87_RS00465   86735 ..   86750 -  -7.5  -2.62515   AATTCTCGCAGATTA              GCGCG AGGCTG CGCGC               CGTGGCGTGACAGAT  50 7
CXD87_RS00460 NONE
CXD87_RS00455   84787 ..   84810 -  -9.4  -3.53012   GCGTTGGTGCGCAAA          GGCGCGACAC TGCC GGGGCGCGCC           ATTGAGTGCGAGTCA  64 107
CXD87_RS00450 NONE
CXD87_RS00445   82754 ..   82775 -  -7.9  -4.62302   GAAGAGCCGGAAAAA           CCCAGTGCG ACGG CGCACAAGG            CCAGTGGCGTGGATA  81 73
CXD87_RS00435   79481 ..   79495 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 131
CXD87_RS00425   77326 ..   77352 -  -8.7  -4.07568   CTCGCTGCTGGAAAA         GCTGCCCGC GCAGCTCCA GCAGGCAGC         CGGCCAGCTGCAGGG  72 308
CXD87_RS00415 NONE
CXD87_RS00410 NONE
        ampD NONE
CXD87_RS00400   73382 ..   73413 - -10.1  -3.25823   GGTGCTGGAGATCAA      CCCGGACCACGCGC TGGTC GCGCG-GATCCGCG      ATGCCAGCGATGCGG  63 318
CXD87_RS00390   71199 ..   71221 - -12.6  -2.82742   ACGCTTTTATAACGA           CCGGCGCCCG CAT CAGGCGCTGG           GCATGAAGACTCCGG  66 195
CXD87_RS00365   66991 ..   67001 -  -8.2  -2.54655   AAAAGGCCCAACCCA                 GGGG TAC CCCC                 AAATTGATGATCCAT  52 507
CXD87_RS00355 NONE
CXD87_RS00350   64500 ..   64513 -  -5.3   -3.5323   AACTTCAAACAAAAC               TATCG CACT CGATA                TCAAGCGCATCGATC  54 1
CXD87_RS00345 NONE
CXD87_RS00340   63284 ..   63310 -  -4.3  -2.78384   GCGCGGCCCATGATA        TCCGTGCCC-CC ACCG GGTGGGAACGGT         ACGACCAGTGTAATA  43 189
CXD87_RS00335   62061 ..   62083 -  -8.4  -4.09685   GGTGATGGCGTAAAA           GGGCATAGCG ATC CGCTATATCC           AGCCTGGCAAGCCAA  72 385
CXD87_RS00325   60987 ..   60998 -    -3  -5.30348   ACTTAACAATAAAAA                TTCA AATA TGAA                 TGTTTAATTTAGTTA  89 105
CXD87_RS00320 NONE
CXD87_RS00315   58900 ..   58930 -  -5.3  -3.73068   GGTCGAAGCCAACAA       CCCCACCACCAGC ATCCA GCTGGTCGTGGCC       GGCATAGGGCTGGGT  57 344
CXD87_RS00305 NONE
CXD87_RS00300 NONE
CXD87_RS00295 NONE
CXD87_RS00290 NONE
CXD87_RS00285 NONE
CXD87_RS00280   53379 ..   53401 -  -4.8  -3.76482   CGACACCAGCAAGAA           CCTGGTCG AGGAAGG CGACAAGG           GCAAGCGCTACGCGC  58 247
CXD87_RS00235   45237 ..   45272 -  -2.4  -4.16842   TTCATGCTCAAGAAA    CGCGTGCGGATCCTG TGGCAGG CCGGCTGCGC-CGCG    CTGCTGCTGGCCGCC  61 474
CXD87_RS00215   43266 ..   43306 - -20.6  -3.53012   GTCTTGGCCGTCAAA CCG-CAGTGTGCCTGTCCC AGCG GGGACAGGCACACTGGCCG  CAGTTGGGACAGGCA 100 66
CXD87_RS00175   35576 ..   35594 - -13.1  -2.84298   GACAGTTCACAACTA             GCGCGGC GCCTG GCCGCGC             GGCAGCCAGTGCCAG  69 4
CXD87_RS00155   30988 ..   31001 -  -3.7  -2.70932   TCTCGCCGCGAATCA               TCGCC TGGC GGCGG                ATCCGGCCAGCATGG  41 94
CXD87_RS00150 NONE
CXD87_RS00145 NONE
CXD87_RS00140 NONE
CXD87_RS00135   28287 ..   28297 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD87_RS00130   26859 ..   26875 -  -5.8  -3.53012   TGCGCTGCCTGCAAA             GC-GGCG CGGA CGCCTGC              GTGCCCCTGCCGGCC  55 433
CXD87_RS00115   24044 ..   24068 -  -7.7  -2.97021   TCGGCAAAGATGATA          TCCAGGCCCAC TGC GCGGGCCTCGC          CCAGCTTGTCCAGCA  53 310
CXD87_RS00100   20076 ..   20099 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 53
