locus-tag class description CXD88_RS00005 PF01134 Glucose inhibited division protein A CXD88_RS00005 PF13932 GidA associated domain CXD88_RS00010 PF02527 rRNA small subunit methyltransferase G CXD88_RS00015 PF13614 AAA domain CXD88_RS00025 PF02195 ParB-like nuclease domain CXD88_RS00025 PF17762 HTH domain found in ParB protein CXD88_RS00050 PF00009 Elongation factor Tu GTP binding domain CXD88_RS00050 PF03144 Elongation factor Tu domain 2 CXD88_RS00050 PF03143 Elongation factor Tu C-terminal domain CXD88_RS00060 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CXD88_RS00065 PF02357 Transcription termination factor nusG CXD88_RS00065 PF00467 KOW motif CXD88_RS00070 PF03946 Ribosomal protein L11, N-terminal domain CXD88_RS00070 PF00298 Ribosomal protein L11, RNA binding domain CXD88_RS00075 PF00687 Ribosomal protein L1p/L10e family CXD88_RS00080 PF00466 Ribosomal protein L10 CXD88_RS00085 PF16320 Ribosomal protein L7/L12 dimerisation domain CXD88_RS00085 PF00542 Ribosomal protein L7/L12 C-terminal domain CXD88_RS00090 PF10385 RNA polymerase beta subunit external 1 domain CXD88_RS00090 PF04565 RNA polymerase Rpb2, domain 3 CXD88_RS00090 PF04561 RNA polymerase Rpb2, domain 2 CXD88_RS00090 PF04563 RNA polymerase beta subunit CXD88_RS00090 PF04560 RNA polymerase Rpb2, domain 7 CXD88_RS00090 PF00562 RNA polymerase Rpb2, domain 6 CXD88_RS00095 PF04983 RNA polymerase Rpb1, domain 3 CXD88_RS00095 PF00623 RNA polymerase Rpb1, domain 2 CXD88_RS00095 PF04998 RNA polymerase Rpb1, domain 5 CXD88_RS00095 PF04997 RNA polymerase Rpb1, domain 1 CXD88_RS00095 PF05000 RNA polymerase Rpb1, domain 4 CXD88_RS00125 PF00072 Response regulator receiver domain CXD88_RS00125 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS00135 PF02515 CoA-transferase family III CXD88_RS00150 PF01575 MaoC like domain CXD88_RS00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS00155 PF03466 LysR substrate binding domain CXD88_RS00160 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS00180 PF02091 Glycyl-tRNA synthetase alpha subunit CXD88_RS00185 PF05746 DALR anticodon binding domain CXD88_RS00185 PF02092 Glycyl-tRNA synthetase beta subunit CXD88_RS00195 PF01553 Acyltransferase CXD88_RS00205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXD88_RS00210 PF01327 Polypeptide deformylase CXD88_RS00250 PF00561 alpha/beta hydrolase fold CXD88_RS00255 PF00561 alpha/beta hydrolase fold CXD88_RS00255 PF07021 Methionine biosynthesis protein MetW CXD88_RS00270 PF07690 Major Facilitator Superfamily CXD88_RS00280 PF01177 Asp/Glu/Hydantoin racemase CXD88_RS00285 PF00005 ABC transporter CXD88_RS00290 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS00300 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS00335 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS00350 PF00970 Oxidoreductase FAD-binding domain CXD88_RS00350 PF00111 2Fe-2S iron-sulfur cluster binding domain CXD88_RS00350 PF00175 Oxidoreductase NAD-binding domain CXD88_RS00355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS00365 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS00395 PF00183 Hsp90 protein CXD88_RS00400 PF13417 Glutathione S-transferase, N-terminal domain CXD88_RS00400 PF00043 Glutathione S-transferase, C-terminal domain CXD88_RS00405 PF01510 N-acetylmuramoyl-L-alanine amidase CXD88_RS00415 PF01578 Cytochrome C assembly protein CXD88_RS00420 PF02978 Signal peptide binding domain CXD88_RS00420 PF02881 SRP54-type protein, helical bundle domain CXD88_RS00420 PF00448 SRP54-type protein, GTPase domain CXD88_RS00435 PF02719 Polysaccharide biosynthesis protein CXD88_RS00445 PF10997 Alternate to MurJ CXD88_RS00450 PF00534 Glycosyl transferases group 1 CXD88_RS00450 PF00862 Sucrose synthase CXD88_RS00455 PF02397 Bacterial sugar transferase CXD88_RS00460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CXD88_RS00470 PF02350 UDP-N-acetylglucosamine 2-epimerase CXD88_RS00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CXD88_RS00480 PF00132 Bacterial transferase hexapeptide (six repeats) CXD88_RS00485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CXD88_RS00485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CXD88_RS00490 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CXD88_RS00495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CXD88_RS00495 PF00534 Glycosyl transferases group 1 CXD88_RS00505 PF03309 Type III pantothenate kinase CXD88_RS00515 PF02405 Permease MlaE CXD88_RS00520 PF00005 ABC transporter CXD88_RS00540 PF00768 D-alanyl-D-alanine carboxypeptidase CXD88_RS00540 PF07943 Penicillin-binding protein 5, C-terminal domain CXD88_RS00545 PF01063 Amino-transferase class IV CXD88_RS00550 PF04359 Protein of unknown function (DUF493) CXD88_RS00555 PF03099 Biotin/lipoate A/B protein ligase family CXD88_RS00560 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CXD88_RS00560 PF04055 Radical SAM superfamily CXD88_RS00565 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CXD88_RS00570 PF04321 RmlD substrate binding domain CXD88_RS00575 PF16363 GDP-mannose 4,6 dehydratase CXD88_RS00590 PF01053 Cys/Met metabolism PLP-dependent enzyme CXD88_RS00595 PF01323 DSBA-like thioredoxin domain CXD88_RS00595 PF00085 Thioredoxin CXD88_RS00605 PF03485 Arginyl tRNA synthetase N terminal domain CXD88_RS00605 PF05746 DALR anticodon binding domain CXD88_RS00605 PF00750 tRNA synthetases class I (R) CXD88_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS00635 PF13416 Bacterial extracellular solute-binding protein CXD88_RS00640 PF17912 MalK OB fold domain CXD88_RS00640 PF00005 ABC transporter CXD88_RS00645 PF00149 Calcineurin-like phosphoesterase CXD88_RS00655 PF00005 ABC transporter CXD88_RS00655 PF12857 TOBE-like domain CXD88_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS00675 PF00356 Bacterial regulatory proteins, lacI family CXD88_RS00685 PF01425 Amidase CXD88_RS00690 PF08502 LeuA allosteric (dimerisation) domain CXD88_RS00690 PF00682 HMGL-like CXD88_RS00700 PF00309 Sigma-54 factor, Activator interacting domain (AID) CXD88_RS00700 PF04552 Sigma-54, DNA binding domain CXD88_RS00700 PF04963 Sigma-54 factor, core binding domain CXD88_RS00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS00710 PF03466 LysR substrate binding domain CXD88_RS00730 PF00585 C-terminal regulatory domain of Threonine dehydratase CXD88_RS00730 PF00291 Pyridoxal-phosphate dependent enzyme CXD88_RS00745 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS00745 PF07729 FCD domain CXD88_RS00750 PF02515 CoA-transferase family III CXD88_RS00760 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS00770 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS00785 PF02626 Carboxyltransferase domain, subdomain A and B CXD88_RS00790 PF02682 Carboxyltransferase domain, subdomain C and D CXD88_RS00800 PF03466 LysR substrate binding domain CXD88_RS00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS00805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXD88_RS00805 PF01842 ACT domain CXD88_RS00805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXD88_RS00815 PF00672 HAMP domain CXD88_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS00815 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS00820 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS00820 PF00072 Response regulator receiver domain CXD88_RS00825 PF00989 PAS fold CXD88_RS00825 PF11808 Phosphate regulon sensor protein PhoR CXD88_RS00825 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS00830 PF00072 Response regulator receiver domain CXD88_RS00830 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS00835 PF01209 ubiE/COQ5 methyltransferase family CXD88_RS00850 PF03109 ABC1 family CXD88_RS00870 PF04536 TPM domain CXD88_RS00880 PF00271 Helicase conserved C-terminal domain CXD88_RS00880 PF00270 DEAD/DEAH box helicase CXD88_RS00885 PF01810 LysE type translocator CXD88_RS00890 PF03144 Elongation factor Tu domain 2 CXD88_RS00890 PF00009 Elongation factor Tu GTP binding domain CXD88_RS00890 PF16658 Class II release factor RF3, C-terminal domain CXD88_RS00900 PF00210 Ferritin-like domain CXD88_RS00930 PF00581 Rhodanese-like domain CXD88_RS00930 PF17773 UPF0176 acylphosphatase like domain CXD88_RS00935 PF01588 Putative tRNA binding domain CXD88_RS00935 PF09334 tRNA synthetases class I (M) CXD88_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase CXD88_RS00960 PF00692 dUTPase CXD88_RS00985 PF01276 Orn/Lys/Arg decarboxylase, major domain CXD88_RS00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CXD88_RS00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CXD88_RS01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CXD88_RS01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CXD88_RS01005 PF02535 ZIP Zinc transporter CXD88_RS01010 PF01571 Aminomethyltransferase folate-binding domain CXD88_RS01010 PF08669 Glycine cleavage T-protein C-terminal barrel domain CXD88_RS01015 PF01597 Glycine cleavage H-protein CXD88_RS01020 PF02347 Glycine cleavage system P-protein CXD88_RS01025 PF07729 FCD domain CXD88_RS01025 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS01030 PF02515 CoA-transferase family III CXD88_RS01065 PF12146 Serine aminopeptidase, S33 CXD88_RS01075 PF02426 Muconolactone delta-isomerase CXD88_RS01080 PF01144 Coenzyme A transferase CXD88_RS01085 PF01144 Coenzyme A transferase CXD88_RS01090 PF01614 Bacterial transcriptional regulator CXD88_RS01090 PF09339 IclR helix-turn-helix domain CXD88_RS01100 PF02667 Short chain fatty acid transporter CXD88_RS01105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXD88_RS01105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXD88_RS01110 PF03797 Autotransporter beta-domain CXD88_RS01110 PF00082 Subtilase family CXD88_RS01115 PF00311 Phosphoenolpyruvate carboxylase CXD88_RS01120 PF06508 Queuosine biosynthesis protein QueC CXD88_RS01150 PF01565 FAD binding domain CXD88_RS01150 PF02913 FAD linked oxidases, C-terminal domain CXD88_RS01155 PF00171 Aldehyde dehydrogenase family CXD88_RS01160 PF01964 Radical SAM ThiC family CXD88_RS01160 PF13667 ThiC-associated domain CXD88_RS01165 PF07549 SecD/SecF GG Motif CXD88_RS01165 PF02355 Protein export membrane protein CXD88_RS01170 PF09518 HindIII restriction endonuclease CXD88_RS01200 PF02627 Carboxymuconolactone decarboxylase family CXD88_RS01210 PF07702 UTRA domain CXD88_RS01210 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS01215 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS01220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS01230 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS01235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CXD88_RS01240 PF12627 Probable RNA and SrmB- binding site of polymerase A CXD88_RS01240 PF01743 Poly A polymerase head domain CXD88_RS01240 PF12626 Polymerase A arginine-rich C-terminus CXD88_RS01250 PF00308 Bacterial dnaA protein CXD88_RS01255 PF02769 AIR synthase related protein, C-terminal domain CXD88_RS01255 PF00586 AIR synthase related protein, N-terminal domain CXD88_RS01265 PF08676 MutL C terminal dimerisation domain CXD88_RS01265 PF01119 DNA mismatch repair protein, C-terminal domain CXD88_RS01270 PF09335 SNARE associated Golgi protein CXD88_RS01275 PF01520 N-acetylmuramoyl-L-alanine amidase CXD88_RS01275 PF11741 AMIN domain CXD88_RS01280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CXD88_RS01285 PF00206 Lyase CXD88_RS01285 PF10415 Fumarase C C-terminus CXD88_RS01295 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS01300 PF03466 LysR substrate binding domain CXD88_RS01310 PF02515 CoA-transferase family III CXD88_RS01315 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS01340 PF01654 Cytochrome bd terminal oxidase subunit I CXD88_RS01345 PF02322 Cytochrome bd terminal oxidase subunit II CXD88_RS01350 PF08173 Membrane bound YbgT-like protein CXD88_RS01355 PF00664 ABC transporter transmembrane region CXD88_RS01355 PF00005 ABC transporter CXD88_RS01360 PF00664 ABC transporter transmembrane region CXD88_RS01360 PF00005 ABC transporter CXD88_RS01365 PF00156 Phosphoribosyl transferase domain CXD88_RS01410 PF04386 Stringent starvation protein B CXD88_RS01415 PF00043 Glutathione S-transferase, C-terminal domain CXD88_RS01415 PF02798 Glutathione S-transferase, N-terminal domain CXD88_RS01420 PF02167 Cytochrome C1 family CXD88_RS01425 PF00033 Cytochrome b/b6/petB CXD88_RS01425 PF00032 Cytochrome b(C-terminal)/b6/petD CXD88_RS01430 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CXD88_RS01430 PF00355 Rieske [2Fe-2S] domain CXD88_RS01435 PF01741 Large-conductance mechanosensitive channel, MscL CXD88_RS01440 PF01784 NIF3 (NGG1p interacting factor 3) CXD88_RS01445 PF13180 PDZ domain CXD88_RS01455 PF04299 Putative FMN-binding domain CXD88_RS01460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXD88_RS01465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS01470 PF07859 alpha/beta hydrolase fold CXD88_RS01480 PF00682 HMGL-like CXD88_RS01480 PF08502 LeuA allosteric (dimerisation) domain CXD88_RS01485 PF12833 Helix-turn-helix domain CXD88_RS01490 PF00920 Dehydratase family CXD88_RS01495 PF07690 Major Facilitator Superfamily CXD88_RS01500 PF03466 LysR substrate binding domain CXD88_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS01510 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CXD88_RS01540 PF07859 alpha/beta hydrolase fold CXD88_RS01550 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS01555 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS01555 PF11862 Domain of unknown function (DUF3382) CXD88_RS01560 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS01560 PF00005 ABC transporter CXD88_RS01565 PF00005 ABC transporter CXD88_RS01580 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS01585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS01585 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS01585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS01590 PF00501 AMP-binding enzyme CXD88_RS01590 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS01610 PF00202 Aminotransferase class-III CXD88_RS01615 PF02581 Thiamine monophosphate synthase CXD88_RS01620 PF08543 Phosphomethylpyrimidine kinase CXD88_RS01625 PF00301 Rubredoxin CXD88_RS01630 PF02622 Uncharacterized ACR, COG1678 CXD88_RS01635 PF03652 Holliday junction resolvase CXD88_RS01640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CXD88_RS01640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CXD88_RS01645 PF01979 Amidohydrolase family CXD88_RS01650 PF01553 Acyltransferase CXD88_RS01655 PF00149 Calcineurin-like phosphoesterase CXD88_RS01665 PF00912 Transglycosylase CXD88_RS01680 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS01680 PF00501 AMP-binding enzyme CXD88_RS01685 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS01700 PF12706 Beta-lactamase superfamily domain CXD88_RS01705 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS01720 PF11737 Protein of unknown function (DUF3300) CXD88_RS01730 PF00563 EAL domain CXD88_RS01730 PF03707 Bacterial signalling protein N terminal repeat CXD88_RS01730 PF00990 Diguanylate cyclase, GGDEF domain CXD88_RS01735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CXD88_RS01735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CXD88_RS01740 PF13532 2OG-Fe(II) oxygenase superfamily CXD88_RS01745 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CXD88_RS01750 PF04463 Protein of unknown function (DUF523) CXD88_RS01755 PF00005 ABC transporter CXD88_RS01760 PF01032 FecCD transport family CXD88_RS01765 PF01497 Periplasmic binding protein CXD88_RS01770 PF05171 Haemin-degrading HemS.ChuX domain CXD88_RS01775 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS01775 PF00593 TonB dependent receptor CXD88_RS01775 PF04886 PT repeat CXD88_RS01780 PF04773 FecR protein CXD88_RS01780 PF16220 Domain of unknown function (DUF4880) CXD88_RS01785 PF04542 Sigma-70 region 2 CXD88_RS01785 PF08281 Sigma-70, region 4 CXD88_RS01810 PF02423 Ornithine cyclodeaminase/mu-crystallin family CXD88_RS01820 PF07729 FCD domain CXD88_RS01820 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS01840 PF00171 Aldehyde dehydrogenase family CXD88_RS01850 PF00175 Oxidoreductase NAD-binding domain CXD88_RS01850 PF00111 2Fe-2S iron-sulfur cluster binding domain CXD88_RS01850 PF00970 Oxidoreductase FAD-binding domain CXD88_RS01875 PF03458 UPF0126 domain CXD88_RS01880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CXD88_RS01880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CXD88_RS01885 PF03372 Endonuclease/Exonuclease/phosphatase family CXD88_RS01890 PF00156 Phosphoribosyl transferase domain CXD88_RS01895 PF02934 GatB/GatE catalytic domain CXD88_RS01895 PF02637 GatB domain CXD88_RS01900 PF01425 Amidase CXD88_RS01905 PF02686 Glu-tRNAGln amidotransferase C subunit CXD88_RS01915 PF04085 rod shape-determining protein MreC CXD88_RS01925 PF00905 Penicillin binding protein transpeptidase domain CXD88_RS01925 PF03717 Penicillin-binding Protein dimerisation domain CXD88_RS01930 PF01098 Cell cycle protein CXD88_RS01935 PF02615 Malate/L-lactate dehydrogenase CXD88_RS01940 PF00939 Sodium:sulfate symporter transmembrane region CXD88_RS01945 PF00440 Bacterial regulatory proteins, tetR family CXD88_RS01955 PF00696 Amino acid kinase family CXD88_RS01960 PF03180 NLPA lipoprotein CXD88_RS01965 PF00578 AhpC/TSA family CXD88_RS01970 PF04972 BON domain CXD88_RS01975 PF13580 SIS domain CXD88_RS01980 PF02021 Uncharacterised protein family UPF0102 CXD88_RS01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CXD88_RS01990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CXD88_RS01990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CXD88_RS02010 PF02515 CoA-transferase family III CXD88_RS02015 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02020 PF02515 CoA-transferase family III CXD88_RS02035 PF09339 IclR helix-turn-helix domain CXD88_RS02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS02050 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02055 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS02055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXD88_RS02055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXD88_RS02060 PF02515 CoA-transferase family III CXD88_RS02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS02065 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS02070 PF03466 LysR substrate binding domain CXD88_RS02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02090 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02105 PF00892 EamA-like transporter family CXD88_RS02110 PF01810 LysE type translocator CXD88_RS02115 PF12146 Serine aminopeptidase, S33 CXD88_RS02135 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CXD88_RS02140 PF00535 Glycosyl transferase family 2 CXD88_RS02155 PF03616 Sodium/glutamate symporter CXD88_RS02165 PF02667 Short chain fatty acid transporter CXD88_RS02180 PF00929 Exonuclease CXD88_RS02210 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS02215 PF03466 LysR substrate binding domain CXD88_RS02220 PF01565 FAD binding domain CXD88_RS02220 PF09330 D-lactate dehydrogenase, membrane binding CXD88_RS02225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS02225 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS02225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS02230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS02230 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS02230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS02235 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02240 PF01546 Peptidase family M20/M25/M40 CXD88_RS02240 PF07687 Peptidase dimerisation domain CXD88_RS02250 PF01042 Endoribonuclease L-PSP CXD88_RS02260 PF00107 Zinc-binding dehydrogenase CXD88_RS02260 PF08240 Alcohol dehydrogenase GroES-like domain CXD88_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS02265 PF03466 LysR substrate binding domain CXD88_RS02270 PF13380 CoA binding domain CXD88_RS02270 PF13607 Succinyl-CoA ligase like flavodoxin domain CXD88_RS02275 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS02285 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02290 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CXD88_RS02295 PF01380 SIS domain CXD88_RS02300 PF01037 Lrp/AsnC ligand binding domain CXD88_RS02305 PF02803 Thiolase, C-terminal domain CXD88_RS02305 PF00108 Thiolase, N-terminal domain CXD88_RS02310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXD88_RS02310 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS02310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXD88_RS02315 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS02315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS02315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS02315 PF12806 Acetyl-CoA dehydrogenase C-terminal like CXD88_RS02320 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02325 PF13607 Succinyl-CoA ligase like flavodoxin domain CXD88_RS02325 PF13380 CoA binding domain CXD88_RS02325 PF00583 Acetyltransferase (GNAT) family CXD88_RS02340 PF00384 Molybdopterin oxidoreductase CXD88_RS02340 PF01568 Molydopterin dinucleotide binding domain CXD88_RS02360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CXD88_RS02360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CXD88_RS02360 PF01488 Shikimate / quinate 5-dehydrogenase CXD88_RS02365 PF03462 PCRF domain CXD88_RS02365 PF00472 RF-1 domain CXD88_RS02370 PF05175 Methyltransferase small domain CXD88_RS02370 PF17827 PrmC N-terminal domain CXD88_RS02375 PF00462 Glutaredoxin CXD88_RS02380 PF02441 Flavoprotein CXD88_RS02385 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02390 PF09084 NMT1/THI5 like CXD88_RS02395 PF03450 CO dehydrogenase flavoprotein C-terminal domain CXD88_RS02395 PF00941 FAD binding domain in molybdopterin dehydrogenase CXD88_RS02400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CXD88_RS02400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CXD88_RS02420 PF05036 Sporulation related domain CXD88_RS02420 PF03330 Lytic transglycolase CXD88_RS02425 PF03668 P-loop ATPase protein family CXD88_RS02435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CXD88_RS02435 PF00034 Cytochrome c CXD88_RS02435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXD88_RS02440 PF07475 HPr Serine kinase C-terminal domain CXD88_RS02440 PF02603 HPr Serine kinase N terminus CXD88_RS02445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CXD88_RS02455 PF00005 ABC transporter CXD88_RS02475 PF00571 CBS domain CXD88_RS02475 PF01380 SIS domain CXD88_RS02480 PF01370 NAD dependent epimerase/dehydratase family CXD88_RS02480 PF02222 ATP-grasp domain CXD88_RS02515 PF00152 tRNA synthetases class II (D, K and N) CXD88_RS02515 PF01336 OB-fold nucleic acid binding domain CXD88_RS02515 PF02938 GAD domain CXD88_RS02520 PF03372 Endonuclease/Exonuclease/phosphatase family CXD88_RS02525 PF13091 PLD-like domain CXD88_RS02550 PF13458 Periplasmic binding protein CXD88_RS02555 PF01425 Amidase CXD88_RS02560 PF05995 Cysteine dioxygenase type I CXD88_RS02565 PF01614 Bacterial transcriptional regulator CXD88_RS02565 PF09339 IclR helix-turn-helix domain CXD88_RS02575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXD88_RS02575 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS02575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXD88_RS02580 PF05275 Copper resistance protein B precursor (CopB) CXD88_RS02585 PF00394 Multicopper oxidase CXD88_RS02585 PF07731 Multicopper oxidase CXD88_RS02585 PF07732 Multicopper oxidase CXD88_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS02640 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS02645 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS02650 PF01256 Carbohydrate kinase CXD88_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS02675 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS02675 PF12911 N-terminal TM domain of oligopeptide transport permease C CXD88_RS02680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS02680 PF00005 ABC transporter CXD88_RS02690 PF01546 Peptidase family M20/M25/M40 CXD88_RS02690 PF07687 Peptidase dimerisation domain CXD88_RS02700 PF00580 UvrD/REP helicase N-terminal domain CXD88_RS02700 PF13361 UvrD-like helicase C-terminal domain CXD88_RS02705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CXD88_RS02705 PF17764 3′ DNA-binding domain (3′BD) CXD88_RS02705 PF00270 DEAD/DEAH box helicase CXD88_RS02705 PF18074 Primosomal protein N C-terminal domain CXD88_RS02705 PF00271 Helicase conserved C-terminal domain CXD88_RS02710 PF01208 Uroporphyrinogen decarboxylase (URO-D) CXD88_RS02720 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CXD88_RS02725 PF02874 ATP synthase alpha/beta family, beta-barrel domain CXD88_RS02725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXD88_RS02730 PF00231 ATP synthase CXD88_RS02735 PF00306 ATP synthase alpha/beta chain, C terminal domain CXD88_RS02735 PF02874 ATP synthase alpha/beta family, beta-barrel domain CXD88_RS02735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXD88_RS02740 PF00213 ATP synthase delta (OSCP) subunit CXD88_RS02745 PF00430 ATP synthase B/B' CF(0) CXD88_RS02750 PF00137 ATP synthase subunit C CXD88_RS02755 PF00119 ATP synthase A chain CXD88_RS02780 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS02785 PF17820 PDZ domain CXD88_RS02785 PF13180 PDZ domain CXD88_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS02790 PF13192 Thioredoxin domain CXD88_RS02800 PF01171 PP-loop family CXD88_RS02810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXD88_RS02810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXD88_RS02810 PF01842 ACT domain CXD88_RS02815 PF13098 Thioredoxin-like domain CXD88_RS02815 PF10411 Disulfide bond isomerase protein N-terminus CXD88_RS02820 PF01494 FAD binding domain CXD88_RS02825 PF03562 MltA specific insert domain CXD88_RS02825 PF06725 3D domain CXD88_RS02830 PF04379 ApaG domain CXD88_RS02835 PF00834 Ribulose-phosphate 3 epimerase family CXD88_RS02840 PF13419 Haloacid dehalogenase-like hydrolase CXD88_RS02845 PF00425 chorismate binding enzyme CXD88_RS02845 PF04715 Anthranilate synthase component I, N terminal region CXD88_RS02850 PF00117 Glutamine amidotransferase class-I CXD88_RS02855 PF00591 Glycosyl transferase family, a/b domain CXD88_RS02855 PF02885 Glycosyl transferase family, helical bundle domain CXD88_RS02860 PF00218 Indole-3-glycerol phosphate synthase CXD88_RS02885 PF03466 LysR substrate binding domain CXD88_RS02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS02890 PF00551 Formyl transferase CXD88_RS02900 PF01613 Flavin reductase like domain CXD88_RS02905 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CXD88_RS02905 PF01243 Pyridoxamine 5'-phosphate oxidase CXD88_RS02915 PF07690 Major Facilitator Superfamily CXD88_RS02920 PF00899 ThiF family CXD88_RS02925 PF07702 UTRA domain CXD88_RS02925 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS02930 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS02930 PF00501 AMP-binding enzyme CXD88_RS02935 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS02950 PF01063 Amino-transferase class IV CXD88_RS02955 PF04715 Anthranilate synthase component I, N terminal region CXD88_RS02955 PF00425 chorismate binding enzyme CXD88_RS02960 PF17760 UvrA interaction domain CXD88_RS02960 PF17755 UvrA DNA-binding domain CXD88_RS02960 PF00005 ABC transporter CXD88_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS02970 PF03466 LysR substrate binding domain CXD88_RS02975 PF00535 Glycosyl transferase family 2 CXD88_RS02980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS03020 PF03776 Septum formation topological specificity factor MinE CXD88_RS03025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CXD88_RS03030 PF05209 Septum formation inhibitor MinC, N-terminal domain CXD88_RS03030 PF03775 Septum formation inhibitor MinC, C-terminal domain CXD88_RS03035 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CXD88_RS03035 PF00749 tRNA synthetases class I (E and Q), catalytic domain CXD88_RS03040 PF01654 Cytochrome bd terminal oxidase subunit I CXD88_RS03050 PF13493 Domain of unknown function (DUF4118) CXD88_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS03050 PF02702 Osmosensitive K+ channel His kinase sensor domain CXD88_RS03055 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS03055 PF00072 Response regulator receiver domain CXD88_RS03070 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS03075 PF04391 Protein of unknown function (DUF533) CXD88_RS03095 PF01464 Transglycosylase SLT domain CXD88_RS03095 PF01476 LysM domain CXD88_RS03100 PF16123 Hydroxyacylglutathione hydrolase C-terminus CXD88_RS03100 PF00753 Metallo-beta-lactamase superfamily CXD88_RS03105 PF08241 Methyltransferase domain CXD88_RS03110 PF00075 RNase H CXD88_RS03160 PF01575 MaoC like domain CXD88_RS03175 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS03180 PF00106 short chain dehydrogenase CXD88_RS03190 PF00005 ABC transporter CXD88_RS03190 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS03195 PF00005 ABC transporter CXD88_RS03200 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS03210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS03210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS03210 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS03215 PF00440 Bacterial regulatory proteins, tetR family CXD88_RS03215 PF08361 MAATS-type transcriptional repressor, C-terminal region CXD88_RS03220 PF14535 AMP-binding enzyme C-terminal domain CXD88_RS03220 PF00501 AMP-binding enzyme CXD88_RS03225 PF02515 CoA-transferase family III CXD88_RS03245 PF04285 Protein of unknown function (DUF444) CXD88_RS03250 PF04293 SpoVR like protein CXD88_RS03265 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS03270 PF07476 Methylaspartate ammonia-lyase C-terminus CXD88_RS03270 PF05034 Methylaspartate ammonia-lyase N-terminus CXD88_RS03275 PF07702 UTRA domain CXD88_RS03275 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS03295 PF09278 MerR, DNA binding CXD88_RS03295 PF00376 MerR family regulatory protein CXD88_RS03305 PF01774 UreD urease accessory protein CXD88_RS03310 PF00547 Urease, gamma subunit CXD88_RS03315 PF04955 HupE / UreJ protein CXD88_RS03320 PF00699 Urease beta subunit CXD88_RS03325 PF01979 Amidohydrolase family CXD88_RS03325 PF00449 Urease alpha-subunit, N-terminal domain CXD88_RS03330 PF05194 UreE urease accessory protein, C-terminal domain CXD88_RS03330 PF02814 UreE urease accessory protein, N-terminal domain CXD88_RS03335 PF01730 UreF CXD88_RS03340 PF02492 CobW/HypB/UreG, nucleotide-binding domain CXD88_RS03350 PF07364 Metallopeptidase family M81 CXD88_RS03350 PF07171 MlrC C-terminus CXD88_RS03360 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS03365 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS03370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS03380 PF00202 Aminotransferase class-III CXD88_RS03385 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS03385 PF00155 Aminotransferase class I and II CXD88_RS03390 PF00186 Dihydrofolate reductase CXD88_RS03395 PF00303 Thymidylate synthase CXD88_RS03405 PF03232 Ubiquinone biosynthesis protein COQ7 CXD88_RS03410 PF00953 Glycosyl transferase family 4 CXD88_RS03415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CXD88_RS03415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CXD88_RS03415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CXD88_RS03420 PF01370 NAD dependent epimerase/dehydratase family CXD88_RS03425 PF03023 Lipid II flippase MurJ CXD88_RS03430 PF00534 Glycosyl transferases group 1 CXD88_RS03430 PF13439 Glycosyltransferase Family 4 CXD88_RS03435 PF13537 Glutamine amidotransferase domain CXD88_RS03435 PF00733 Asparagine synthase CXD88_RS03440 PF13439 Glycosyltransferase Family 4 CXD88_RS03440 PF00534 Glycosyl transferases group 1 CXD88_RS03445 PF13439 Glycosyltransferase Family 4 CXD88_RS03445 PF00534 Glycosyl transferases group 1 CXD88_RS03450 PF00534 Glycosyl transferases group 1 CXD88_RS03450 PF13477 Glycosyl transferase 4-like CXD88_RS03455 PF00342 Phosphoglucose isomerase CXD88_RS03460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CXD88_RS03460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CXD88_RS03460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CXD88_RS03460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CXD88_RS03470 PF01565 FAD binding domain CXD88_RS03470 PF02913 FAD linked oxidases, C-terminal domain CXD88_RS03475 PF00072 Response regulator receiver domain CXD88_RS03475 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS03480 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS03480 PF08521 Two-component sensor kinase N-terminal CXD88_RS03485 PF00884 Sulfatase CXD88_RS03495 PF04209 homogentisate 1,2-dioxygenase CXD88_RS03500 PF03466 LysR substrate binding domain CXD88_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS03510 PF01494 FAD binding domain CXD88_RS03520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CXD88_RS03520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CXD88_RS03520 PF06827 Zinc finger found in FPG and IleRS CXD88_RS03530 PF03550 Outer membrane lipoprotein LolB CXD88_RS03535 PF00288 GHMP kinases N terminal domain CXD88_RS03535 PF08544 GHMP kinases C terminal CXD88_RS03545 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CXD88_RS03545 PF14572 Phosphoribosyl synthetase-associated domain CXD88_RS03550 PF01386 Ribosomal L25p family CXD88_RS03550 PF14693 Ribosomal protein TL5, C-terminal domain CXD88_RS03555 PF01195 Peptidyl-tRNA hydrolase CXD88_RS03565 PF06071 Protein of unknown function (DUF933) CXD88_RS03565 PF01926 50S ribosome-binding GTPase CXD88_RS03570 PF13356 Arm DNA-binding domain CXD88_RS03570 PF00589 Phage integrase family CXD88_RS03590 PF01555 DNA methylase CXD88_RS03595 PF13175 AAA ATPase domain CXD88_RS03630 PF00580 UvrD/REP helicase N-terminal domain CXD88_RS03630 PF13361 UvrD-like helicase C-terminal domain CXD88_RS03650 PF12951 Passenger-associated-transport-repeat CXD88_RS03660 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS03660 PF00072 Response regulator receiver domain CXD88_RS03675 PF17938 Tetracyclin repressor-like, C-terminal domain CXD88_RS03675 PF00440 Bacterial regulatory proteins, tetR family CXD88_RS03705 PF01266 FAD dependent oxidoreductase CXD88_RS03720 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS03775 PF00561 alpha/beta hydrolase fold CXD88_RS03785 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS03790 PF00005 ABC transporter CXD88_RS03790 PF03459 TOBE domain CXD88_RS03795 PF13091 PLD-like domain CXD88_RS03805 PF03167 Uracil DNA glycosylase superfamily CXD88_RS03810 PF00271 Helicase conserved C-terminal domain CXD88_RS03810 PF00270 DEAD/DEAH box helicase CXD88_RS03820 PF01743 Poly A polymerase head domain CXD88_RS03820 PF12627 Probable RNA and SrmB- binding site of polymerase A CXD88_RS03825 PF14718 Soluble lytic murein transglycosylase L domain CXD88_RS03825 PF01464 Transglycosylase SLT domain CXD88_RS03835 PF00083 Sugar (and other) transporter CXD88_RS03835 PF07690 Major Facilitator Superfamily CXD88_RS03840 PF00850 Histone deacetylase domain CXD88_RS03845 PF03466 LysR substrate binding domain CXD88_RS03845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS03855 PF02219 Methylenetetrahydrofolate reductase CXD88_RS03860 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CXD88_RS03865 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CXD88_RS03865 PF05221 S-adenosyl-L-homocysteine hydrolase CXD88_RS03870 PF00534 Glycosyl transferases group 1 CXD88_RS03870 PF13439 Glycosyltransferase Family 4 CXD88_RS03880 PF02772 S-adenosylmethionine synthetase, central domain CXD88_RS03880 PF02773 S-adenosylmethionine synthetase, C-terminal domain CXD88_RS03880 PF00438 S-adenosylmethionine synthetase, N-terminal domain CXD88_RS03890 PF03279 Bacterial lipid A biosynthesis acyltransferase CXD88_RS03895 PF01678 Diaminopimelate epimerase CXD88_RS03905 PF02899 Phage integrase, N-terminal SAM-like domain CXD88_RS03905 PF00589 Phage integrase family CXD88_RS03910 PF00593 TonB dependent receptor CXD88_RS03910 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS03915 PF03824 High-affinity nickel-transport protein CXD88_RS03925 PF01297 Zinc-uptake complex component A periplasmic CXD88_RS03930 PF00950 ABC 3 transport family CXD88_RS03935 PF00005 ABC transporter CXD88_RS03940 PF01475 Ferric uptake regulator family CXD88_RS03945 PF02492 CobW/HypB/UreG, nucleotide-binding domain CXD88_RS03945 PF07683 Cobalamin synthesis protein cobW C-terminal domain CXD88_RS03950 PF01258 Prokaryotic dksA/traR C4-type zinc finger CXD88_RS03955 PF00227 Proteasome subunit CXD88_RS03960 PF07724 AAA domain (Cdc48 subfamily) CXD88_RS03960 PF00004 ATPase family associated with various cellular activities (AAA) CXD88_RS03960 PF10431 C-terminal, D2-small domain, of ClpB protein CXD88_RS03975 PF01923 Cobalamin adenosyltransferase CXD88_RS03995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CXD88_RS03995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CXD88_RS04005 PF01970 Tripartite tricarboxylate transporter TctA family CXD88_RS04045 PF01790 Prolipoprotein diacylglyceryl transferase CXD88_RS04050 PF00920 Dehydratase family CXD88_RS04055 PF00034 Cytochrome c CXD88_RS04060 PF01625 Peptide methionine sulfoxide reductase CXD88_RS04065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXD88_RS04070 PF01037 Lrp/AsnC ligand binding domain CXD88_RS04110 PF07687 Peptidase dimerisation domain CXD88_RS04110 PF01546 Peptidase family M20/M25/M40 CXD88_RS04115 PF01979 Amidohydrolase family CXD88_RS04120 PF12848 ABC transporter CXD88_RS04120 PF00005 ABC transporter CXD88_RS04120 PF16326 ABC transporter C-terminal domain CXD88_RS04130 PF02381 MraZ protein, putative antitoxin-like CXD88_RS04135 PF01795 MraW methylase family CXD88_RS04140 PF04999 Cell division protein FtsL CXD88_RS04145 PF03717 Penicillin-binding Protein dimerisation domain CXD88_RS04145 PF00905 Penicillin binding protein transpeptidase domain CXD88_RS04150 PF02875 Mur ligase family, glutamate ligase domain CXD88_RS04150 PF08245 Mur ligase middle domain CXD88_RS04155 PF00953 Glycosyl transferase family 4 CXD88_RS04160 PF08245 Mur ligase middle domain CXD88_RS04160 PF02875 Mur ligase family, glutamate ligase domain CXD88_RS04165 PF01098 Cell cycle protein CXD88_RS04170 PF03033 Glycosyltransferase family 28 N-terminal domain CXD88_RS04170 PF04101 Glycosyltransferase family 28 C-terminal domain CXD88_RS04175 PF02875 Mur ligase family, glutamate ligase domain CXD88_RS04175 PF08245 Mur ligase middle domain CXD88_RS04175 PF01225 Mur ligase family, catalytic domain CXD88_RS04180 PF07478 D-ala D-ala ligase C-terminus CXD88_RS04180 PF01820 D-ala D-ala ligase N-terminus CXD88_RS04185 PF03799 Cell division protein FtsQ CXD88_RS04185 PF08478 POTRA domain, FtsQ-type CXD88_RS04190 PF02491 SHS2 domain inserted in FTSA CXD88_RS04195 PF12327 FtsZ family, C-terminal domain CXD88_RS04195 PF00091 Tubulin/FtsZ family, GTPase domain CXD88_RS04200 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CXD88_RS04210 PF01551 Peptidase family M23 CXD88_RS04210 PF01476 LysM domain CXD88_RS04210 PF08525 Opacity-associated protein A N-terminal motif CXD88_RS04215 PF07516 SecA Wing and Scaffold domain CXD88_RS04215 PF01043 SecA preprotein cross-linking domain CXD88_RS04215 PF07517 SecA DEAD-like domain CXD88_RS04215 PF02810 SEC-C motif CXD88_RS04225 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS04235 PF00106 short chain dehydrogenase CXD88_RS04240 PF01266 FAD dependent oxidoreductase CXD88_RS04245 PF01037 Lrp/AsnC ligand binding domain CXD88_RS04255 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CXD88_RS04265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CXD88_RS04265 PF08501 Shikimate dehydrogenase substrate binding domain CXD88_RS04265 PF01488 Shikimate / quinate 5-dehydrogenase CXD88_RS04275 PF00773 RNB domain CXD88_RS04280 PF05728 Uncharacterised protein family (UPF0227) CXD88_RS04285 PF01225 Mur ligase family, catalytic domain CXD88_RS04285 PF08245 Mur ligase middle domain CXD88_RS04285 PF02875 Mur ligase family, glutamate ligase domain CXD88_RS04290 PF08534 Redoxin CXD88_RS04295 PF01220 Dehydroquinase class II CXD88_RS04300 PF00364 Biotin-requiring enzyme CXD88_RS04305 PF00289 Biotin carboxylase, N-terminal domain CXD88_RS04305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXD88_RS04305 PF02785 Biotin carboxylase C-terminal domain CXD88_RS04320 PF00294 pfkB family carbohydrate kinase CXD88_RS04345 PF03062 MBOAT, membrane-bound O-acyltransferase family CXD88_RS04350 PF00501 AMP-binding enzyme CXD88_RS04350 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS04365 PF00268 Ribonucleotide reductase, small chain CXD88_RS04370 PF00317 Ribonucleotide reductase, all-alpha domain CXD88_RS04370 PF02867 Ribonucleotide reductase, barrel domain CXD88_RS04370 PF03477 ATP cone domain CXD88_RS04385 PF01037 Lrp/AsnC ligand binding domain CXD88_RS04400 PF00749 tRNA synthetases class I (E and Q), catalytic domain CXD88_RS04405 PF13607 Succinyl-CoA ligase like flavodoxin domain CXD88_RS04405 PF13380 CoA binding domain CXD88_RS04405 PF00583 Acetyltransferase (GNAT) family CXD88_RS04420 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS04420 PF07729 FCD domain CXD88_RS04430 PF03880 DbpA RNA binding domain CXD88_RS04430 PF00270 DEAD/DEAH box helicase CXD88_RS04430 PF00271 Helicase conserved C-terminal domain CXD88_RS04435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CXD88_RS04440 PF00857 Isochorismatase family CXD88_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS04450 PF00005 ABC transporter CXD88_RS04460 PF02230 Phospholipase/Carboxylesterase CXD88_RS04465 PF04751 Protein of unknown function (DUF615) CXD88_RS04470 PF01523 Putative modulator of DNA gyrase CXD88_RS04475 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS04480 PF00572 Ribosomal protein L13 CXD88_RS04485 PF00380 Ribosomal protein S9/S16 CXD88_RS04490 PF02774 Semialdehyde dehydrogenase, dimerisation domain CXD88_RS04490 PF01118 Semialdehyde dehydrogenase, NAD binding domain CXD88_RS04500 PF01521 Iron-sulphur cluster biosynthesis CXD88_RS04505 PF03702 Anhydro-N-acetylmuramic acid kinase CXD88_RS04510 PF08460 Bacterial SH3 domain CXD88_RS04510 PF01551 Peptidase family M23 CXD88_RS04520 PF00579 tRNA synthetases class I (W and Y) CXD88_RS04520 PF01479 S4 domain CXD88_RS04530 PF00464 Serine hydroxymethyltransferase CXD88_RS04535 PF03477 ATP cone domain CXD88_RS04550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CXD88_RS04550 PF01872 RibD C-terminal domain CXD88_RS04570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS04570 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS04570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS04570 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS04570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS04570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS04580 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS04585 PF03466 LysR substrate binding domain CXD88_RS04590 PF02515 CoA-transferase family III CXD88_RS04610 PF02678 Pirin CXD88_RS04610 PF05726 Pirin C-terminal cupin domain CXD88_RS04625 PF00072 Response regulator receiver domain CXD88_RS04630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CXD88_RS04630 PF06481 COX Aromatic Rich Motif CXD88_RS04635 PF00115 Cytochrome C and Quinol oxidase polypeptide I CXD88_RS04640 PF00510 Cytochrome c oxidase subunit III CXD88_RS04645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CXD88_RS04650 PF01022 Bacterial regulatory protein, arsR family CXD88_RS04670 PF05114 Protein of unknown function (DUF692) CXD88_RS04685 PF00593 TonB dependent receptor CXD88_RS04685 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS04700 PF01551 Peptidase family M23 CXD88_RS04700 PF01476 LysM domain CXD88_RS04715 PF04461 Protein of unknown function (DUF520) CXD88_RS04725 PF08281 Sigma-70, region 4 CXD88_RS04725 PF04542 Sigma-70 region 2 CXD88_RS04745 PF00795 Carbon-nitrogen hydrolase CXD88_RS04750 PF01523 Putative modulator of DNA gyrase CXD88_RS04755 PF00793 DAHP synthetase I family CXD88_RS04760 PF13018 Extended Signal Peptide of Type V secretion system CXD88_RS04760 PF05860 haemagglutination activity domain CXD88_RS04760 PF13018 Extended Signal Peptide of Type V secretion system CXD88_RS04760 PF05594 Haemagluttinin repeat CXD88_RS04760 PF13332 Hemagglutinin repeat CXD88_RS04760 PF05594 Haemagluttinin repeat CXD88_RS04760 PF13332 Hemagglutinin repeat CXD88_RS04760 PF05860 haemagglutination activity domain CXD88_RS04765 PF01565 FAD binding domain CXD88_RS04765 PF02913 FAD linked oxidases, C-terminal domain CXD88_RS04770 PF01565 FAD binding domain CXD88_RS04770 PF02913 FAD linked oxidases, C-terminal domain CXD88_RS04775 PF01565 FAD binding domain CXD88_RS04780 PF02754 Cysteine-rich domain CXD88_RS04780 PF13183 4Fe-4S dicluster domain CXD88_RS04785 PF00756 Putative esterase CXD88_RS04790 PF00593 TonB dependent receptor CXD88_RS04790 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS04800 PF02233 NAD(P) transhydrogenase beta subunit CXD88_RS04810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CXD88_RS04810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CXD88_RS04820 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS04825 PF03466 LysR substrate binding domain CXD88_RS04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS04835 PF01925 Sulfite exporter TauE/SafE CXD88_RS04840 PF00043 Glutathione S-transferase, C-terminal domain CXD88_RS04840 PF13417 Glutathione S-transferase, N-terminal domain CXD88_RS04845 PF08328 Adenylosuccinate lyase C-terminal CXD88_RS04845 PF00206 Lyase CXD88_RS04850 PF01322 Cytochrome C' CXD88_RS04870 PF01594 AI-2E family transporter CXD88_RS04880 PF07729 FCD domain CXD88_RS04880 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS04890 PF01425 Amidase CXD88_RS04895 PF02515 CoA-transferase family III CXD88_RS04900 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS04920 PF00005 ABC transporter CXD88_RS04935 PF09339 IclR helix-turn-helix domain CXD88_RS04935 PF01614 Bacterial transcriptional regulator CXD88_RS04945 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS04945 PF00501 AMP-binding enzyme CXD88_RS04950 PF01042 Endoribonuclease L-PSP CXD88_RS04955 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS04970 PF00005 ABC transporter CXD88_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS04990 PF03466 LysR substrate binding domain CXD88_RS05000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CXD88_RS05005 PF07690 Major Facilitator Superfamily CXD88_RS05010 PF03466 LysR substrate binding domain CXD88_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS05025 PF01425 Amidase CXD88_RS05030 PF00677 Lumazine binding domain CXD88_RS05035 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS05040 PF01037 Lrp/AsnC ligand binding domain CXD88_RS05040 PF13404 AsnC-type helix-turn-helix domain CXD88_RS05050 PF00501 AMP-binding enzyme CXD88_RS05050 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS05060 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS05065 PF00005 ABC transporter CXD88_RS05080 PF00107 Zinc-binding dehydrogenase CXD88_RS05080 PF08240 Alcohol dehydrogenase GroES-like domain CXD88_RS05100 PF00403 Heavy-metal-associated domain CXD88_RS05105 PF01966 HD domain CXD88_RS05110 PF00155 Aminotransferase class I and II CXD88_RS05115 PF03466 LysR substrate binding domain CXD88_RS05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS05125 PF00083 Sugar (and other) transporter CXD88_RS05145 PF13609 Gram-negative porin CXD88_RS05150 PF02548 Ketopantoate hydroxymethyltransferase CXD88_RS05155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS05155 PF03466 LysR substrate binding domain CXD88_RS05220 PF00440 Bacterial regulatory proteins, tetR family CXD88_RS05230 PF05170 AsmA family CXD88_RS05235 PF03352 Methyladenine glycosylase CXD88_RS05240 PF09278 MerR, DNA binding CXD88_RS05240 PF00376 MerR family regulatory protein CXD88_RS05255 PF01547 Bacterial extracellular solute-binding protein CXD88_RS05270 PF00005 ABC transporter CXD88_RS05270 PF08402 TOBE domain CXD88_RS05275 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS05280 PF14785 Maltose transport system permease protein MalF P2 domain CXD88_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS05300 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS05305 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS05305 PF07729 FCD domain CXD88_RS05335 PF00465 Iron-containing alcohol dehydrogenase CXD88_RS05350 PF03180 NLPA lipoprotein CXD88_RS05355 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS05360 PF09383 NIL domain CXD88_RS05360 PF00005 ABC transporter CXD88_RS05365 PF13802 Galactose mutarotase-like CXD88_RS05365 PF01055 Glycosyl hydrolases family 31 CXD88_RS05375 PF00459 Inositol monophosphatase family CXD88_RS05390 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS05390 PF00501 AMP-binding enzyme CXD88_RS05395 PF01546 Peptidase family M20/M25/M40 CXD88_RS05395 PF07687 Peptidase dimerisation domain CXD88_RS05400 PF03466 LysR substrate binding domain CXD88_RS05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS05405 PF03601 Conserved hypothetical protein 698 CXD88_RS05410 PF03061 Thioesterase superfamily CXD88_RS05415 PF00571 CBS domain CXD88_RS05415 PF03448 MgtE intracellular N domain CXD88_RS05415 PF01769 Divalent cation transporter CXD88_RS05435 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS05445 PF02609 Exonuclease VII small subunit CXD88_RS05450 PF00348 Polyprenyl synthetase CXD88_RS05455 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CXD88_RS05455 PF02780 Transketolase, C-terminal domain CXD88_RS05455 PF02779 Transketolase, pyrimidine binding domain CXD88_RS05460 PF02649 Type I GTP cyclohydrolase folE2 CXD88_RS05465 PF01250 Ribosomal protein S6 CXD88_RS05475 PF01084 Ribosomal protein S18 CXD88_RS05480 PF01281 Ribosomal protein L9, N-terminal domain CXD88_RS05480 PF03948 Ribosomal protein L9, C-terminal domain CXD88_RS05490 PF00772 DnaB-like helicase N terminal domain CXD88_RS05490 PF03796 DnaB-like helicase C terminal domain CXD88_RS05495 PF13593 SBF-like CPA transporter family (DUF4137) CXD88_RS05500 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CXD88_RS05505 PF02562 PhoH-like protein CXD88_RS05505 PF13638 PIN domain CXD88_RS05510 PF00578 AhpC/TSA family CXD88_RS05515 PF04430 Protein of unknown function (DUF498/DUF598) CXD88_RS05520 PF00155 Aminotransferase class I and II CXD88_RS05525 PF00742 Homoserine dehydrogenase CXD88_RS05525 PF01842 ACT domain CXD88_RS05525 PF03447 Homoserine dehydrogenase, NAD binding domain CXD88_RS05530 PF00291 Pyridoxal-phosphate dependent enzyme CXD88_RS05530 PF14821 Threonine synthase N terminus CXD88_RS05545 PF02615 Malate/L-lactate dehydrogenase CXD88_RS05575 PF03328 HpcH/HpaI aldolase/citrate lyase family CXD88_RS05580 PF01649 Ribosomal protein S20 CXD88_RS05590 PF03023 Lipid II flippase MurJ CXD88_RS05595 PF00106 short chain dehydrogenase CXD88_RS05600 PF05191 Adenylate kinase, active site lid CXD88_RS05605 PF02348 Cytidylyltransferase CXD88_RS05610 PF03966 Trm112p-like protein CXD88_RS05615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CXD88_RS05620 PF02472 Biopolymer transport protein ExbD/TolR CXD88_RS05625 PF01618 MotA/TolQ/ExbB proton channel family CXD88_RS05635 PF13742 OB-fold nucleic acid binding domain CXD88_RS05635 PF02601 Exonuclease VII, large subunit CXD88_RS05640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CXD88_RS05640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CXD88_RS05645 PF00654 Voltage gated chloride channel CXD88_RS05650 PF02803 Thiolase, C-terminal domain CXD88_RS05650 PF00108 Thiolase, N-terminal domain CXD88_RS05660 PF00313 'Cold-shock' DNA-binding domain CXD88_RS05665 PF02617 ATP-dependent Clp protease adaptor protein ClpS CXD88_RS05670 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CXD88_RS05670 PF17962 Bacterial macroglobulin domain 6 CXD88_RS05670 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CXD88_RS05670 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CXD88_RS05670 PF00207 Alpha-2-macroglobulin family CXD88_RS05670 PF07703 Alpha-2-macroglobulin bait region domain CXD88_RS05670 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CXD88_RS05670 PF01835 MG2 domain CXD88_RS05675 PF06832 Penicillin-Binding Protein C-terminus Family CXD88_RS05675 PF00912 Transglycosylase CXD88_RS05675 PF00905 Penicillin binding protein transpeptidase domain CXD88_RS05680 PF17871 AAA lid domain CXD88_RS05680 PF07724 AAA domain (Cdc48 subfamily) CXD88_RS05680 PF00004 ATPase family associated with various cellular activities (AAA) CXD88_RS05680 PF02861 Clp amino terminal domain, pathogenicity island component CXD88_RS05680 PF10431 C-terminal, D2-small domain, of ClpB protein CXD88_RS05685 PF04403 Paraquat-inducible protein A CXD88_RS05690 PF02470 MlaD protein CXD88_RS05700 PF14850 DNA-binding domain of Proline dehydrogenase CXD88_RS05700 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CXD88_RS05700 PF00171 Aldehyde dehydrogenase family CXD88_RS05700 PF01619 Proline dehydrogenase CXD88_RS05710 PF13458 Periplasmic binding protein CXD88_RS05715 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS05720 PF11862 Domain of unknown function (DUF3382) CXD88_RS05720 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS05725 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS05725 PF00005 ABC transporter CXD88_RS05730 PF00005 ABC transporter CXD88_RS05735 PF07690 Major Facilitator Superfamily CXD88_RS05740 PF00440 Bacterial regulatory proteins, tetR family CXD88_RS05755 PF00543 Nitrogen regulatory protein P-II CXD88_RS05760 PF04380 Membrane fusogenic activity CXD88_RS05775 PF07690 Major Facilitator Superfamily CXD88_RS05775 PF00083 Sugar (and other) transporter CXD88_RS05785 PF00115 Cytochrome C and Quinol oxidase polypeptide I CXD88_RS05790 PF00510 Cytochrome c oxidase subunit III CXD88_RS05795 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CXD88_RS05800 PF02104 SURF1 family CXD88_RS05825 PF13411 MerR HTH family regulatory protein CXD88_RS05830 PF00403 Heavy-metal-associated domain CXD88_RS05850 PF04055 Radical SAM superfamily CXD88_RS05850 PF06968 Biotin and Thiamin Synthesis associated domain CXD88_RS05865 PF08534 Redoxin CXD88_RS05875 PF01738 Dienelactone hydrolase family CXD88_RS05885 PF01967 MoaC family CXD88_RS05895 PF02391 MoaE protein CXD88_RS05900 PF00994 Probable molybdopterin binding domain CXD88_RS05905 PF03454 MoeA C-terminal region (domain IV) CXD88_RS05905 PF03453 MoeA N-terminal region (domain I and II) CXD88_RS05905 PF00994 Probable molybdopterin binding domain CXD88_RS05910 PF04055 Radical SAM superfamily CXD88_RS05910 PF06463 Molybdenum Cofactor Synthesis C CXD88_RS05930 PF14698 Argininosuccinate lyase C-terminal CXD88_RS05930 PF00206 Lyase CXD88_RS05935 PF00924 Mechanosensitive ion channel CXD88_RS05940 PF00795 Carbon-nitrogen hydrolase CXD88_RS05940 PF02540 NAD synthase CXD88_RS05945 PF00543 Nitrogen regulatory protein P-II CXD88_RS05970 PF03466 LysR substrate binding domain CXD88_RS05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS05980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS06000 PF03193 RsgA GTPase CXD88_RS06005 PF01435 Peptidase family M48 CXD88_RS06010 PF00929 Exonuclease CXD88_RS06015 PF03853 YjeF-related protein N-terminus CXD88_RS06020 PF07848 PaaX-like protein CXD88_RS06020 PF08223 PaaX-like protein C-terminal domain CXD88_RS06025 PF05138 Phenylacetic acid catabolic protein CXD88_RS06030 PF06243 Phenylacetic acid degradation B CXD88_RS06035 PF05138 Phenylacetic acid catabolic protein CXD88_RS06040 PF01883 Iron-sulfur cluster assembly protein CXD88_RS06060 PF00171 Aldehyde dehydrogenase family CXD88_RS06065 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS06070 PF03061 Thioesterase superfamily CXD88_RS06075 PF00501 AMP-binding enzyme CXD88_RS06075 PF14535 AMP-binding enzyme C-terminal domain CXD88_RS06080 PF16970 Type-1 fimbrial protein, A CXD88_RS06105 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS06110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS06110 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CXD88_RS06115 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CXD88_RS06120 PF02769 AIR synthase related protein, C-terminal domain CXD88_RS06120 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CXD88_RS06120 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CXD88_RS06125 PF05860 haemagglutination activity domain CXD88_RS06125 PF05594 Haemagluttinin repeat CXD88_RS06125 PF13332 Hemagglutinin repeat CXD88_RS06125 PF13018 Extended Signal Peptide of Type V secretion system CXD88_RS06155 PF00596 Class II Aldolase and Adducin N-terminal domain CXD88_RS06160 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS06165 PF01242 6-pyruvoyl tetrahydropterin synthase CXD88_RS06175 PF00472 RF-1 domain CXD88_RS06195 PF00701 Dihydrodipicolinate synthetase family CXD88_RS06200 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS06225 PF14537 Cytochrome c3 CXD88_RS06225 PF00890 FAD binding domain CXD88_RS06230 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS06245 PF01266 FAD dependent oxidoreductase CXD88_RS06245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CXD88_RS06250 PF08220 DeoR-like helix-turn-helix domain CXD88_RS06250 PF00455 DeoR C terminal sensor domain CXD88_RS06255 PF17912 MalK OB fold domain CXD88_RS06255 PF00005 ABC transporter CXD88_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS06290 PF01037 Lrp/AsnC ligand binding domain CXD88_RS06295 PF01266 FAD dependent oxidoreductase CXD88_RS06300 PF00149 Calcineurin-like phosphoesterase CXD88_RS06300 PF12320 Type 5 capsule protein repressor C-terminal domain CXD88_RS06340 PF00571 CBS domain CXD88_RS06340 PF00478 IMP dehydrogenase / GMP reductase domain CXD88_RS06345 PF00117 Glutamine amidotransferase class-I CXD88_RS06345 PF00958 GMP synthase C terminal domain CXD88_RS06345 PF02540 NAD synthase CXD88_RS06360 PF13657 HipA N-terminal domain CXD88_RS06360 PF07804 HipA-like C-terminal domain CXD88_RS06370 PF07690 Major Facilitator Superfamily CXD88_RS06385 PF01979 Amidohydrolase family CXD88_RS06395 PF00005 ABC transporter CXD88_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS06430 PF01740 STAS domain CXD88_RS06430 PF00916 Sulfate permease family CXD88_RS06435 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CXD88_RS06435 PF00753 Metallo-beta-lactamase superfamily CXD88_RS06435 PF10996 Beta-Casp domain CXD88_RS06455 PF12706 Beta-lactamase superfamily domain CXD88_RS06460 PF12833 Helix-turn-helix domain CXD88_RS06460 PF01965 DJ-1/PfpI family CXD88_RS06465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS06465 PF03466 LysR substrate binding domain CXD88_RS06480 PF00107 Zinc-binding dehydrogenase CXD88_RS06480 PF08240 Alcohol dehydrogenase GroES-like domain CXD88_RS06485 PF07690 Major Facilitator Superfamily CXD88_RS06490 PF00155 Aminotransferase class I and II CXD88_RS06490 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS06500 PF01810 LysE type translocator CXD88_RS06510 PF01546 Peptidase family M20/M25/M40 CXD88_RS06510 PF07687 Peptidase dimerisation domain CXD88_RS06515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS06520 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS06525 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS06525 PF12911 N-terminal TM domain of oligopeptide transport permease C CXD88_RS06530 PF00005 ABC transporter CXD88_RS06530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS06535 PF00356 Bacterial regulatory proteins, lacI family CXD88_RS06565 PF09335 SNARE associated Golgi protein CXD88_RS06580 PF13847 Methyltransferase domain CXD88_RS06595 PF00155 Aminotransferase class I and II CXD88_RS06595 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS06605 PF00692 dUTPase CXD88_RS06615 PF01632 Ribosomal protein L35 CXD88_RS06620 PF00453 Ribosomal protein L20 CXD88_RS06625 PF01409 tRNA synthetases class II core domain (F) CXD88_RS06625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CXD88_RS06630 PF03484 tRNA synthetase B5 domain CXD88_RS06630 PF03483 B3/4 domain CXD88_RS06630 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CXD88_RS06630 PF01588 Putative tRNA binding domain CXD88_RS06630 PF03147 Ferredoxin-fold anticodon binding domain CXD88_RS06635 PF00216 Bacterial DNA-binding protein CXD88_RS06680 PF04231 Endonuclease I CXD88_RS06700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CXD88_RS06700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CXD88_RS06705 PF04381 Putative exonuclease, RdgC CXD88_RS06715 PF02515 CoA-transferase family III CXD88_RS06720 PF03466 LysR substrate binding domain CXD88_RS06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS06740 PF00106 short chain dehydrogenase CXD88_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS06755 PF00005 ABC transporter CXD88_RS06755 PF08402 TOBE domain CXD88_RS06760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXD88_RS06760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXD88_RS06760 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS06765 PF08946 Osmosensory transporter coiled coil CXD88_RS06765 PF00083 Sugar (and other) transporter CXD88_RS06770 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS06775 PF00072 Response regulator receiver domain CXD88_RS06775 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS06780 PF00154 recA bacterial DNA recombination protein CXD88_RS06785 PF02631 RecX family CXD88_RS06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS06790 PF03466 LysR substrate binding domain CXD88_RS06795 PF01717 Cobalamin-independent synthase, Catalytic domain CXD88_RS06795 PF08267 Cobalamin-independent synthase, N-terminal domain CXD88_RS06805 PF00549 CoA-ligase CXD88_RS06805 PF08442 ATP-grasp domain CXD88_RS06810 PF02629 CoA binding domain CXD88_RS06810 PF00549 CoA-ligase CXD88_RS06815 PF03741 Integral membrane protein TerC family CXD88_RS06820 PF03741 Integral membrane protein TerC family CXD88_RS06825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CXD88_RS06825 PF03900 Porphobilinogen deaminase, C-terminal domain CXD88_RS06845 PF00719 Inorganic pyrophosphatase CXD88_RS06850 PF01557 Fumarylacetoacetate (FAA) hydrolase family CXD88_RS06885 PF13629 Pilus formation protein N terminal region CXD88_RS06885 PF00263 Bacterial type II and III secretion system protein CXD88_RS06885 PF04972 BON domain CXD88_RS06890 PF00437 Type II/IV secretion system protein CXD88_RS06905 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS06910 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CXD88_RS06910 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CXD88_RS06915 PF02615 Malate/L-lactate dehydrogenase CXD88_RS06920 PF03466 LysR substrate binding domain CXD88_RS06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS06930 PF01266 FAD dependent oxidoreductase CXD88_RS06935 PF04267 Sarcosine oxidase, delta subunit family CXD88_RS06940 PF08669 Glycine cleavage T-protein C-terminal barrel domain CXD88_RS06940 PF01571 Aminomethyltransferase folate-binding domain CXD88_RS06940 PF17806 Sarcosine oxidase A3 domain CXD88_RS06940 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS06950 PF00551 Formyl transferase CXD88_RS06955 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS06965 PF00561 alpha/beta hydrolase fold CXD88_RS06975 PF01565 FAD binding domain CXD88_RS06975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CXD88_RS06980 PF05173 Dihydrodipicolinate reductase, C-terminus CXD88_RS06980 PF01113 Dihydrodipicolinate reductase, N-terminus CXD88_RS06985 PF04355 SmpA / OmlA family CXD88_RS06990 PF01475 Ferric uptake regulator family CXD88_RS06995 PF02463 RecF/RecN/SMC N terminal domain CXD88_RS07000 PF01513 ATP-NAD kinase CXD88_RS07005 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CXD88_RS07005 PF01628 HrcA protein C terminal domain CXD88_RS07010 PF00762 Ferrochelatase CXD88_RS07020 PF01025 GrpE CXD88_RS07030 PF00012 Hsp70 protein CXD88_RS07035 PF00226 DnaJ domain CXD88_RS07035 PF01556 DnaJ C terminal domain CXD88_RS07035 PF00684 DnaJ central domain CXD88_RS07040 PF00675 Insulinase (Peptidase family M16) CXD88_RS07040 PF05193 Peptidase M16 inactive domain CXD88_RS07060 PF17862 AAA+ lid domain CXD88_RS07060 PF00004 ATPase family associated with various cellular activities (AAA) CXD88_RS07060 PF01434 Peptidase family M41 CXD88_RS07070 PF00034 Cytochrome c CXD88_RS07085 PF00180 Isocitrate/isopropylmalate dehydrogenase CXD88_RS07105 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS07105 PF00072 Response regulator receiver domain CXD88_RS07115 PF02669 K+-transporting ATPase, c chain CXD88_RS07125 PF03814 Potassium-transporting ATPase A subunit CXD88_RS07140 PF00474 Sodium:solute symporter family CXD88_RS07155 PF00893 Small Multidrug Resistance protein CXD88_RS07160 PF01713 Smr domain CXD88_RS07160 PF00488 MutS domain V CXD88_RS07165 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS07170 PF17854 FtsK alpha domain CXD88_RS07170 PF01580 FtsK/SpoIIIE family CXD88_RS07170 PF09397 Ftsk gamma domain CXD88_RS07170 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CXD88_RS07175 PF03548 Outer membrane lipoprotein carrier protein LolA CXD88_RS07180 PF16193 AAA C-terminal domain CXD88_RS07180 PF12002 MgsA AAA+ ATPase C terminal CXD88_RS07180 PF00004 ATPase family associated with various cellular activities (AAA) CXD88_RS07185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CXD88_RS07185 PF02403 Seryl-tRNA synthetase N-terminal domain CXD88_RS07210 PF00990 Diguanylate cyclase, GGDEF domain CXD88_RS07210 PF17151 Periplasmic sensor domain CXD88_RS07225 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS07225 PF07660 Secretin and TonB N terminus short domain CXD88_RS07225 PF00593 TonB dependent receptor CXD88_RS07230 PF07690 Major Facilitator Superfamily CXD88_RS07250 PF06276 Ferric iron reductase FhuF-like transporter CXD88_RS07250 PF04183 IucA / IucC family CXD88_RS07260 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CXD88_RS07270 PF02254 TrkA-N domain CXD88_RS07270 PF00999 Sodium/hydrogen exchanger family CXD88_RS07275 PF00106 short chain dehydrogenase CXD88_RS07285 PF03883 Peroxide stress protein YaaA CXD88_RS07305 PF00990 Diguanylate cyclase, GGDEF domain CXD88_RS07325 PF00196 Bacterial regulatory proteins, luxR family CXD88_RS07330 PF03129 Anticodon binding domain CXD88_RS07330 PF02824 TGS domain CXD88_RS07330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CXD88_RS07330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CXD88_RS07335 PF05198 Translation initiation factor IF-3, N-terminal domain CXD88_RS07335 PF00707 Translation initiation factor IF-3, C-terminal domain CXD88_RS07340 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CXD88_RS07340 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CXD88_RS07350 PF00381 PTS HPr component phosphorylation site CXD88_RS07355 PF02896 PEP-utilising enzyme, TIM barrel domain CXD88_RS07355 PF00391 PEP-utilising enzyme, mobile domain CXD88_RS07355 PF05524 PEP-utilising enzyme, N-terminal CXD88_RS07370 PF02423 Ornithine cyclodeaminase/mu-crystallin family CXD88_RS07380 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS07385 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS07390 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS07395 PF00005 ABC transporter CXD88_RS07410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXD88_RS07410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXD88_RS07420 PF02293 AmiS/UreI family transporter CXD88_RS07425 PF03069 Acetamidase/Formamidase family CXD88_RS07440 PF01116 Fructose-bisphosphate aldolase class-II CXD88_RS07450 PF01259 SAICAR synthetase CXD88_RS07455 PF15723 Motility quorum-sensing regulator, toxin of MqsA CXD88_RS07460 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CXD88_RS07470 PF02600 Disulfide bond formation protein DsbB CXD88_RS07475 PF00731 AIR carboxylase CXD88_RS07480 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CXD88_RS07480 PF02222 ATP-grasp domain CXD88_RS07485 PF03481 Putative GTP-binding controlling metal-binding CXD88_RS07485 PF01300 Telomere recombination CXD88_RS07490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS07495 PF01614 Bacterial transcriptional regulator CXD88_RS07495 PF09339 IclR helix-turn-helix domain CXD88_RS07500 PF00491 Arginase family CXD88_RS07505 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS07510 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS07515 PF00005 ABC transporter CXD88_RS07520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS07520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS07530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS07530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS07530 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS07535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS07535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS07535 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS07540 PF03466 LysR substrate binding domain CXD88_RS07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS07545 PF00589 Phage integrase family CXD88_RS07545 PF02899 Phage integrase, N-terminal SAM-like domain CXD88_RS07550 PF04073 Aminoacyl-tRNA editing domain CXD88_RS07555 PF01174 SNO glutamine amidotransferase family CXD88_RS07570 PF00768 D-alanyl-D-alanine carboxypeptidase CXD88_RS07580 PF07690 Major Facilitator Superfamily CXD88_RS07590 PF12705 PD-(D/E)XK nuclease superfamily CXD88_RS07590 PF00580 UvrD/REP helicase N-terminal domain CXD88_RS07590 PF13361 UvrD-like helicase C-terminal domain CXD88_RS07600 PF12170 DNA polymerase III tau subunit V interacting with alpha CXD88_RS07600 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CXD88_RS07600 PF12169 DNA polymerase III subunits gamma and tau domain III CXD88_RS07605 PF02575 YbaB/EbfC DNA-binding family CXD88_RS07610 PF13662 Toprim domain CXD88_RS07610 PF02132 RecR protein CXD88_RS07630 PF04228 Putative neutral zinc metallopeptidase CXD88_RS07635 PF01300 Telomere recombination CXD88_RS07680 PF03358 NADPH-dependent FMN reductase CXD88_RS07685 PF07311 Dodecin CXD88_RS07690 PF05190 MutS family domain IV CXD88_RS07690 PF05192 MutS domain III CXD88_RS07690 PF05188 MutS domain II CXD88_RS07690 PF00488 MutS domain V CXD88_RS07690 PF01624 MutS domain I CXD88_RS07695 PF08007 Cupin superfamily protein CXD88_RS07700 PF16970 Type-1 fimbrial protein, A CXD88_RS07705 PF06804 NlpB/DapX lipoprotein CXD88_RS07710 PF00701 Dihydrodipicolinate synthetase family CXD88_RS07725 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS07735 PF00005 ABC transporter CXD88_RS07740 PF04607 Region found in RelA / SpoT proteins CXD88_RS07740 PF02824 TGS domain CXD88_RS07740 PF13291 ACT domain CXD88_RS07745 PF01192 RNA polymerase Rpb6 CXD88_RS07750 PF00625 Guanylate kinase CXD88_RS07755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXD88_RS07760 PF00034 Cytochrome c CXD88_RS07770 PF00877 NlpC/P60 family CXD88_RS07775 PF01048 Phosphorylase superfamily CXD88_RS07775 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CXD88_RS07795 PF03755 YicC-like family, N-terminal region CXD88_RS07795 PF08340 Domain of unknown function (DUF1732) CXD88_RS07800 PF03725 3' exoribonuclease family, domain 2 CXD88_RS07800 PF01138 3' exoribonuclease family, domain 1 CXD88_RS07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS07810 PF03466 LysR substrate binding domain CXD88_RS07820 PF00990 Diguanylate cyclase, GGDEF domain CXD88_RS07820 PF17154 Gammaproteobacterial periplasmic sensor domain CXD88_RS07820 PF00563 EAL domain CXD88_RS07820 PF00672 HAMP domain CXD88_RS07825 PF01725 Ham1 family CXD88_RS07835 PF04055 Radical SAM superfamily CXD88_RS07835 PF06969 HemN C-terminal domain CXD88_RS07840 PF00120 Glutamine synthetase, catalytic domain CXD88_RS07840 PF03951 Glutamine synthetase, beta-Grasp domain CXD88_RS07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS07845 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS07845 PF00989 PAS fold CXD88_RS07850 PF02954 Bacterial regulatory protein, Fis family CXD88_RS07850 PF00072 Response regulator receiver domain CXD88_RS07850 PF00158 Sigma-54 interaction domain CXD88_RS07855 PF03466 LysR substrate binding domain CXD88_RS07855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS07860 PF02678 Pirin CXD88_RS07860 PF17954 Quercetinase C-terminal cupin domain CXD88_RS07865 PF02678 Pirin CXD88_RS07865 PF05726 Pirin C-terminal cupin domain CXD88_RS07875 PF08402 TOBE domain CXD88_RS07875 PF00005 ABC transporter CXD88_RS07880 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS07890 PF00970 Oxidoreductase FAD-binding domain CXD88_RS07890 PF00175 Oxidoreductase NAD-binding domain CXD88_RS07895 PF03466 LysR substrate binding domain CXD88_RS07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS07905 PF00248 Aldo/keto reductase family CXD88_RS07915 PF01042 Endoribonuclease L-PSP CXD88_RS07920 PF00270 DEAD/DEAH box helicase CXD88_RS07920 PF17191 RecG wedge domain CXD88_RS07920 PF00271 Helicase conserved C-terminal domain CXD88_RS07925 PF03466 LysR substrate binding domain CXD88_RS07925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS07930 PF03466 LysR substrate binding domain CXD88_RS07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS07935 PF00171 Aldehyde dehydrogenase family CXD88_RS07940 PF00210 Ferritin-like domain CXD88_RS07960 PF00535 Glycosyl transferase family 2 CXD88_RS07970 PF00005 ABC transporter CXD88_RS07980 PF00534 Glycosyl transferases group 1 CXD88_RS07990 PF02563 Polysaccharide biosynthesis/export protein CXD88_RS07995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CXD88_RS07995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CXD88_RS07995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CXD88_RS08000 PF01370 NAD dependent epimerase/dehydratase family CXD88_RS08005 PF05159 Capsule polysaccharide biosynthesis protein CXD88_RS08010 PF05159 Capsule polysaccharide biosynthesis protein CXD88_RS08020 PF00106 short chain dehydrogenase CXD88_RS08045 PF00005 ABC transporter CXD88_RS08050 PF00005 ABC transporter CXD88_RS08050 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS08065 PF03741 Integral membrane protein TerC family CXD88_RS08075 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS08090 PF17863 AAA lid domain CXD88_RS08090 PF07726 ATPase family associated with various cellular activities (AAA) CXD88_RS08125 PF00884 Sulfatase CXD88_RS08150 PF00196 Bacterial regulatory proteins, luxR family CXD88_RS08150 PF00072 Response regulator receiver domain CXD88_RS08155 PF12951 Passenger-associated-transport-repeat CXD88_RS08155 PF00082 Subtilase family CXD88_RS08155 PF03797 Autotransporter beta-domain CXD88_RS08160 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CXD88_RS08170 PF00043 Glutathione S-transferase, C-terminal domain CXD88_RS08170 PF02798 Glutathione S-transferase, N-terminal domain CXD88_RS08175 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CXD88_RS08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS08180 PF03466 LysR substrate binding domain CXD88_RS08185 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS08195 PF01070 FMN-dependent dehydrogenase CXD88_RS08200 PF01557 Fumarylacetoacetate (FAA) hydrolase family CXD88_RS08215 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS08220 PF03466 LysR substrate binding domain CXD88_RS08225 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS08250 PF03358 NADPH-dependent FMN reductase CXD88_RS08275 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS08285 PF03466 LysR substrate binding domain CXD88_RS08285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS08305 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CXD88_RS08305 PF00361 Proton-conducting membrane transporter CXD88_RS08305 PF13244 Domain of unknown function (DUF4040) CXD88_RS08305 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CXD88_RS08310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CXD88_RS08315 PF00361 Proton-conducting membrane transporter CXD88_RS08320 PF01899 Na+/H+ ion antiporter subunit CXD88_RS08325 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CXD88_RS08350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CXD88_RS08355 PF02016 LD-carboxypeptidase N-terminal domain CXD88_RS08355 PF17676 LD-carboxypeptidase C-terminal domain CXD88_RS08360 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS08365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS08375 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS08380 PF12848 ABC transporter CXD88_RS08380 PF00005 ABC transporter CXD88_RS08385 PF00005 ABC transporter CXD88_RS08415 PF00175 Oxidoreductase NAD-binding domain CXD88_RS08415 PF00042 Globin CXD88_RS08415 PF00970 Oxidoreductase FAD-binding domain CXD88_RS08420 PF02082 Transcriptional regulator CXD88_RS08425 PF01266 FAD dependent oxidoreductase CXD88_RS08440 PF01571 Aminomethyltransferase folate-binding domain CXD88_RS08445 PF02618 YceG-like family CXD88_RS08450 PF02223 Thymidylate kinase CXD88_RS08455 PF12169 DNA polymerase III subunits gamma and tau domain III CXD88_RS08460 PF01026 TatD related DNase CXD88_RS08475 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS08485 PF00005 ABC transporter CXD88_RS08495 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CXD88_RS08495 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CXD88_RS08505 PF07687 Peptidase dimerisation domain CXD88_RS08505 PF01546 Peptidase family M20/M25/M40 CXD88_RS08510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS08510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS08510 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS08520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS08520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CXD88_RS08530 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CXD88_RS08530 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS08535 PF07729 FCD domain CXD88_RS08535 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS08575 PF01425 Amidase CXD88_RS08580 PF07286 Protein of unknown function (DUF1445) CXD88_RS08590 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS08590 PF00072 Response regulator receiver domain CXD88_RS08590 PF00989 PAS fold CXD88_RS08590 PF01627 Hpt domain CXD88_RS08590 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS08595 PF00072 Response regulator receiver domain CXD88_RS08595 PF00196 Bacterial regulatory proteins, luxR family CXD88_RS08600 PF05594 Haemagluttinin repeat CXD88_RS08600 PF13332 Hemagglutinin repeat CXD88_RS08600 PF05860 haemagglutination activity domain CXD88_RS08600 PF13018 Extended Signal Peptide of Type V secretion system CXD88_RS08605 PF16970 Type-1 fimbrial protein, A CXD88_RS08610 PF02753 Pili assembly chaperone PapD, C-terminal domain CXD88_RS08610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CXD88_RS08615 PF13953 PapC C-terminal domain CXD88_RS08615 PF13954 PapC N-terminal domain CXD88_RS08615 PF00577 Outer membrane usher protein CXD88_RS08620 PF00419 Fimbrial protein CXD88_RS08625 PF17287 POTRA domain CXD88_RS08625 PF08479 POTRA domain, ShlB-type CXD88_RS08625 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CXD88_RS08640 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS08675 PF01968 Hydantoinase/oxoprolinase CXD88_RS08675 PF05378 Hydantoinase/oxoprolinase N-terminal region CXD88_RS08690 PF05552 Conserved TM helix CXD88_RS08690 PF00924 Mechanosensitive ion channel CXD88_RS08700 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS08705 PF00588 SpoU rRNA Methylase family CXD88_RS08710 PF00459 Inositol monophosphatase family CXD88_RS08715 PF03471 Transporter associated domain CXD88_RS08715 PF03741 Integral membrane protein TerC family CXD88_RS08720 PF02673 Bacitracin resistance protein BacA CXD88_RS08725 PF00149 Calcineurin-like phosphoesterase CXD88_RS08730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CXD88_RS08740 PF09190 DALR domain CXD88_RS08740 PF01406 tRNA synthetases class I (C) catalytic domain CXD88_RS08745 PF02805 Metal binding domain of Ada CXD88_RS08745 PF06029 AlkA N-terminal domain CXD88_RS08745 PF00730 HhH-GPD superfamily base excision DNA repair protein CXD88_RS08745 PF12833 Helix-turn-helix domain CXD88_RS08750 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CXD88_RS08760 PF01171 PP-loop family CXD88_RS08760 PF09179 TilS substrate binding domain CXD88_RS08765 PF00696 Amino acid kinase family CXD88_RS08765 PF01842 ACT domain CXD88_RS08765 PF13840 ACT domain CXD88_RS08790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXD88_RS08790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXD88_RS08795 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CXD88_RS08795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS08800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS08805 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS08810 PF00561 alpha/beta hydrolase fold CXD88_RS08815 PF03447 Homoserine dehydrogenase, NAD binding domain CXD88_RS08815 PF01958 Domain of unknown function DUF108 CXD88_RS08830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS08830 PF03466 LysR substrate binding domain CXD88_RS08845 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS08850 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS08855 PF00005 ABC transporter CXD88_RS08855 PF08402 TOBE domain CXD88_RS08865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CXD88_RS08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS08870 PF09339 IclR helix-turn-helix domain CXD88_RS08870 PF01614 Bacterial transcriptional regulator CXD88_RS08875 PF13380 CoA binding domain CXD88_RS08880 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS08885 PF01042 Endoribonuclease L-PSP CXD88_RS08910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CXD88_RS08920 PF00535 Glycosyl transferase family 2 CXD88_RS08925 PF01522 Polysaccharide deacetylase CXD88_RS08925 PF14883 Hypothetical glycosyl hydrolase family 13 CXD88_RS08945 PF12802 MarR family CXD88_RS08950 PF00196 Bacterial regulatory proteins, luxR family CXD88_RS08950 PF00072 Response regulator receiver domain CXD88_RS08960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CXD88_RS08960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CXD88_RS08960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CXD88_RS08960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CXD88_RS08965 PF00342 Phosphoglucose isomerase CXD88_RS08970 PF00132 Bacterial transferase hexapeptide (six repeats) CXD88_RS08980 PF02146 Sir2 family CXD88_RS08985 PF00459 Inositol monophosphatase family CXD88_RS08990 PF00171 Aldehyde dehydrogenase family CXD88_RS08995 PF00202 Aminotransferase class-III CXD88_RS09010 PF00580 UvrD/REP helicase N-terminal domain CXD88_RS09010 PF13361 UvrD-like helicase C-terminal domain CXD88_RS09015 PF01544 CorA-like Mg2+ transporter protein CXD88_RS09025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS09030 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS09035 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS09035 PF12911 N-terminal TM domain of oligopeptide transport permease C CXD88_RS09040 PF00005 ABC transporter CXD88_RS09040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS09045 PF01047 MarR family CXD88_RS09065 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CXD88_RS09065 PF08479 POTRA domain, ShlB-type CXD88_RS09070 PF03707 Bacterial signalling protein N terminal repeat CXD88_RS09070 PF00990 Diguanylate cyclase, GGDEF domain CXD88_RS09070 PF00563 EAL domain CXD88_RS09100 PF00263 Bacterial type II and III secretion system protein CXD88_RS09100 PF04972 BON domain CXD88_RS09100 PF13629 Pilus formation protein N terminal region CXD88_RS09140 PF00072 Response regulator receiver domain CXD88_RS09140 PF00158 Sigma-54 interaction domain CXD88_RS09140 PF02954 Bacterial regulatory protein, Fis family CXD88_RS09155 PF04542 Sigma-70 region 2 CXD88_RS09155 PF08281 Sigma-70, region 4 CXD88_RS09165 PF00034 Cytochrome c CXD88_RS09170 PF08207 Elongation factor P (EF-P) KOW-like domain CXD88_RS09170 PF09285 Elongation factor P, C-terminal CXD88_RS09170 PF01132 Elongation factor P (EF-P) OB domain CXD88_RS09185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CXD88_RS09190 PF00694 Aconitase C-terminal domain CXD88_RS09190 PF00330 Aconitase family (aconitate hydratase) CXD88_RS09200 PF00593 TonB dependent receptor CXD88_RS09200 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS09220 PF00691 OmpA family CXD88_RS09230 PF06434 Aconitate hydratase 2 N-terminus CXD88_RS09230 PF00330 Aconitase family (aconitate hydratase) CXD88_RS09230 PF11791 Aconitate B N-terminal domain CXD88_RS09255 PF00892 EamA-like transporter family CXD88_RS09260 PF01925 Sulfite exporter TauE/SafE CXD88_RS09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS09280 PF03466 LysR substrate binding domain CXD88_RS09285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CXD88_RS09285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CXD88_RS09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS09295 PF03466 LysR substrate binding domain CXD88_RS09340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CXD88_RS09340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CXD88_RS09345 PF01425 Amidase CXD88_RS09355 PF00171 Aldehyde dehydrogenase family CXD88_RS09370 PF13603 Leucyl-tRNA synthetase, Domain 2 CXD88_RS09370 PF00133 tRNA synthetases class I (I, L, M and V) CXD88_RS09370 PF09334 tRNA synthetases class I (M) CXD88_RS09370 PF08264 Anticodon-binding domain of tRNA CXD88_RS09375 PF07690 Major Facilitator Superfamily CXD88_RS09380 PF01047 MarR family CXD88_RS09405 PF01740 STAS domain CXD88_RS09405 PF00916 Sulfate permease family CXD88_RS09410 PF00471 Ribosomal protein L33 CXD88_RS09415 PF00830 Ribosomal L28 family CXD88_RS09420 PF07690 Major Facilitator Superfamily CXD88_RS09450 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS09455 PF00005 ABC transporter CXD88_RS09455 PF00571 CBS domain CXD88_RS09460 PF01361 Tautomerase enzyme CXD88_RS09465 PF00108 Thiolase, N-terminal domain CXD88_RS09465 PF02803 Thiolase, C-terminal domain CXD88_RS09475 PF07729 FCD domain CXD88_RS09475 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS09485 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS09495 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS09500 PF00080 Copper/zinc superoxide dismutase (SODC) CXD88_RS09515 PF00005 ABC transporter CXD88_RS09520 PF03459 TOBE domain CXD88_RS09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS09540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXD88_RS09540 PF00529 HlyD membrane-fusion protein of T1SS CXD88_RS09545 PF00873 AcrB/AcrD/AcrF family CXD88_RS09555 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CXD88_RS09560 PF01648 4'-phosphopantetheinyl transferase superfamily CXD88_RS09565 PF00933 Glycosyl hydrolase family 3 N terminal domain CXD88_RS09570 PF01541 GIY-YIG catalytic domain CXD88_RS09570 PF02151 UvrB/uvrC motif CXD88_RS09570 PF08459 UvrC Helix-hairpin-helix N-terminal CXD88_RS09575 PF01066 CDP-alcohol phosphatidyltransferase CXD88_RS09585 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CXD88_RS09585 PF14489 QueF-like protein CXD88_RS09590 PF00463 Isocitrate lyase family CXD88_RS09615 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS09620 PF13458 Periplasmic binding protein CXD88_RS09625 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CXD88_RS09625 PF00355 Rieske [2Fe-2S] domain CXD88_RS09630 PF00866 Ring hydroxylating beta subunit CXD88_RS09635 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS09645 PF00111 2Fe-2S iron-sulfur cluster binding domain CXD88_RS09650 PF02515 CoA-transferase family III CXD88_RS09655 PF07859 alpha/beta hydrolase fold CXD88_RS09660 PF14535 AMP-binding enzyme C-terminal domain CXD88_RS09660 PF00501 AMP-binding enzyme CXD88_RS09665 PF02803 Thiolase, C-terminal domain CXD88_RS09665 PF00108 Thiolase, N-terminal domain CXD88_RS09680 PF03466 LysR substrate binding domain CXD88_RS09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS09685 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS09710 PF01152 Bacterial-like globin CXD88_RS09755 PF01522 Polysaccharide deacetylase CXD88_RS09760 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS09790 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS09790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXD88_RS09815 PF03466 LysR substrate binding domain CXD88_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS09825 PF00111 2Fe-2S iron-sulfur cluster binding domain CXD88_RS09825 PF01799 [2Fe-2S] binding domain CXD88_RS09830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CXD88_RS09840 PF06719 AraC-type transcriptional regulator N-terminus CXD88_RS09840 PF12833 Helix-turn-helix domain CXD88_RS09860 PF07690 Major Facilitator Superfamily CXD88_RS09890 PF00005 ABC transporter CXD88_RS09890 PF00664 ABC transporter transmembrane region CXD88_RS09900 PF02535 ZIP Zinc transporter CXD88_RS09915 PF00916 Sulfate permease family CXD88_RS09915 PF01740 STAS domain CXD88_RS09935 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CXD88_RS09935 PF03625 Domain of unknown function DUF302 CXD88_RS09945 PF12833 Helix-turn-helix domain CXD88_RS09945 PF02805 Metal binding domain of Ada CXD88_RS09950 PF07237 Protein of unknown function (DUF1428) CXD88_RS09955 PF02567 Phenazine biosynthesis-like protein CXD88_RS09960 PF03466 LysR substrate binding domain CXD88_RS09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS09965 PF04286 Protein of unknown function (DUF445) CXD88_RS09980 PF00171 Aldehyde dehydrogenase family CXD88_RS09985 PF01590 GAF domain CXD88_RS09985 PF00158 Sigma-54 interaction domain CXD88_RS09985 PF02954 Bacterial regulatory protein, Fis family CXD88_RS10005 PF03788 LrgA family CXD88_RS10010 PF13649 Methyltransferase domain CXD88_RS10020 PF00155 Aminotransferase class I and II CXD88_RS10025 PF00202 Aminotransferase class-III CXD88_RS10060 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CXD88_RS10060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CXD88_RS10065 PF13746 4Fe-4S dicluster domain CXD88_RS10065 PF12801 4Fe-4S binding domain CXD88_RS10065 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CXD88_RS10090 PF00005 ABC transporter CXD88_RS10095 PF01061 ABC-2 type transporter CXD88_RS10100 PF01594 AI-2E family transporter CXD88_RS10135 PF03979 Sigma-70 factor, region 1.1 CXD88_RS10135 PF00140 Sigma-70 factor, region 1.2 CXD88_RS10135 PF04539 Sigma-70 region 3 CXD88_RS10135 PF04545 Sigma-70, region 4 CXD88_RS10135 PF04546 Sigma-70, non-essential region CXD88_RS10135 PF04542 Sigma-70 region 2 CXD88_RS10145 PF10410 DnaB-helicase binding domain of primase CXD88_RS10145 PF01807 CHC2 zinc finger CXD88_RS10145 PF08275 DNA primase catalytic core, N-terminal domain CXD88_RS10145 PF08278 DNA primase DnaG DnaB-binding CXD88_RS10150 PF01165 Ribosomal protein S21 CXD88_RS10155 PF00156 Phosphoribosyl transferase domain CXD88_RS10160 PF00709 Adenylosuccinate synthetase CXD88_RS10165 PF13393 Histidyl-tRNA synthetase CXD88_RS10170 PF01145 SPFH domain / Band 7 family CXD88_RS10175 PF01145 SPFH domain / Band 7 family CXD88_RS10175 PF12221 Bacterial membrane protein N terminal CXD88_RS10180 PF01926 50S ribosome-binding GTPase CXD88_RS10180 PF16360 GTP-binding GTPase Middle Region CXD88_RS10180 PF13167 GTP-binding GTPase N-terminal CXD88_RS10185 PF17209 Hfq protein CXD88_RS10190 PF00155 Aminotransferase class I and II CXD88_RS10195 PF01926 50S ribosome-binding GTPase CXD88_RS10195 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CXD88_RS10200 PF13360 PQQ-like domain CXD88_RS10205 PF09976 Tetratricopeptide repeat-like domain CXD88_RS10210 PF13393 Histidyl-tRNA synthetase CXD88_RS10210 PF03129 Anticodon binding domain CXD88_RS10215 PF04551 GcpE protein CXD88_RS10225 PF04055 Radical SAM superfamily CXD88_RS10230 PF00334 Nucleoside diphosphate kinase CXD88_RS10235 PF00133 tRNA synthetases class I (I, L, M and V) CXD88_RS10235 PF08264 Anticodon-binding domain of tRNA CXD88_RS10235 PF10458 Valyl tRNA synthetase tRNA binding arm CXD88_RS10250 PF08521 Two-component sensor kinase N-terminal CXD88_RS10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS10250 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS10275 PF00266 Aminotransferase class-V CXD88_RS10280 PF01746 tRNA (Guanine-1)-methyltransferase CXD88_RS10285 PF01782 RimM N-terminal domain CXD88_RS10290 PF00886 Ribosomal protein S16 CXD88_RS10300 PF01206 Sulfurtransferase TusA CXD88_RS10305 PF01411 tRNA synthetases class II (A) CXD88_RS10305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CXD88_RS10305 PF02272 DHHA1 domain CXD88_RS10350 PF01425 Amidase CXD88_RS10355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS10355 PF00005 ABC transporter CXD88_RS10360 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS10365 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS10370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS10390 PF03466 LysR substrate binding domain CXD88_RS10390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS10395 PF13416 Bacterial extracellular solute-binding protein CXD88_RS10400 PF01266 FAD dependent oxidoreductase CXD88_RS10405 PF00175 Oxidoreductase NAD-binding domain CXD88_RS10405 PF00970 Oxidoreductase FAD-binding domain CXD88_RS10405 PF00111 2Fe-2S iron-sulfur cluster binding domain CXD88_RS10410 PF02261 Aspartate decarboxylase CXD88_RS10430 PF07005 Sugar-binding N-terminal domain CXD88_RS10430 PF17042 Nucleotide-binding C-terminal domain CXD88_RS10445 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS10455 PF02142 MGS-like domain CXD88_RS10460 PF04384 Iron-sulphur cluster assembly CXD88_RS10465 PF00111 2Fe-2S iron-sulfur cluster binding domain CXD88_RS10470 PF00012 Hsp70 protein CXD88_RS10475 PF07743 HSCB C-terminal oligomerisation domain CXD88_RS10480 PF01521 Iron-sulphur cluster biosynthesis CXD88_RS10485 PF01592 NifU-like N terminal domain CXD88_RS10490 PF00266 Aminotransferase class-V CXD88_RS10495 PF02082 Transcriptional regulator CXD88_RS10500 PF01451 Low molecular weight phosphotyrosine protein phosphatase CXD88_RS10505 PF02151 UvrB/uvrC motif CXD88_RS10505 PF00271 Helicase conserved C-terminal domain CXD88_RS10505 PF17757 UvrB interaction domain CXD88_RS10505 PF04851 Type III restriction enzyme, res subunit CXD88_RS10505 PF12344 Ultra-violet resistance protein B CXD88_RS10510 PF00155 Aminotransferase class I and II CXD88_RS10515 PF00717 Peptidase S24-like CXD88_RS10515 PF01726 LexA DNA binding domain CXD88_RS10540 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS10545 PF01144 Coenzyme A transferase CXD88_RS10550 PF01144 Coenzyme A transferase CXD88_RS10570 PF00108 Thiolase, N-terminal domain CXD88_RS10570 PF02803 Thiolase, C-terminal domain CXD88_RS10580 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS10585 PF01575 MaoC like domain CXD88_RS10590 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS10595 PF02515 CoA-transferase family III CXD88_RS10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS10600 PF03466 LysR substrate binding domain CXD88_RS10605 PF02190 ATP-dependent protease La (LON) substrate-binding domain CXD88_RS10605 PF05362 Lon protease (S16) C-terminal proteolytic domain CXD88_RS10605 PF00004 ATPase family associated with various cellular activities (AAA) CXD88_RS10610 PF06689 ClpX C4-type zinc finger CXD88_RS10610 PF07724 AAA domain (Cdc48 subfamily) CXD88_RS10610 PF10431 C-terminal, D2-small domain, of ClpB protein CXD88_RS10615 PF00574 Clp protease CXD88_RS10620 PF05698 Bacterial trigger factor protein (TF) C-terminus CXD88_RS10620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CXD88_RS10620 PF05697 Bacterial trigger factor protein (TF) CXD88_RS10625 PF03350 Uncharacterized protein family, UPF0114 CXD88_RS10630 PF00313 'Cold-shock' DNA-binding domain CXD88_RS10640 PF00313 'Cold-shock' DNA-binding domain CXD88_RS10675 PF00132 Bacterial transferase hexapeptide (six repeats) CXD88_RS10675 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CXD88_RS10675 PF14602 Hexapeptide repeat of succinyl-transferase CXD88_RS10680 PF07687 Peptidase dimerisation domain CXD88_RS10680 PF01546 Peptidase family M20/M25/M40 CXD88_RS10685 PF05175 Methyltransferase small domain CXD88_RS10690 PF00005 ABC transporter CXD88_RS10690 PF12848 ABC transporter CXD88_RS10695 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS10700 PF13361 UvrD-like helicase C-terminal domain CXD88_RS10700 PF00580 UvrD/REP helicase N-terminal domain CXD88_RS10720 PF00551 Formyl transferase CXD88_RS10725 PF06574 FAD synthetase CXD88_RS10725 PF01687 Riboflavin kinase CXD88_RS10730 PF00133 tRNA synthetases class I (I, L, M and V) CXD88_RS10730 PF08264 Anticodon-binding domain of tRNA CXD88_RS10730 PF06827 Zinc finger found in FPG and IleRS CXD88_RS10735 PF01252 Signal peptidase (SPase) II CXD88_RS10740 PF04127 DNA / pantothenate metabolism flavoprotein CXD88_RS10740 PF02441 Flavoprotein CXD88_RS10750 PF01037 Lrp/AsnC ligand binding domain CXD88_RS10770 PF13406 Transglycosylase SLT domain CXD88_RS10775 PF04305 Protein of unknown function (DUF455) CXD88_RS10795 PF08245 Mur ligase middle domain CXD88_RS10795 PF08443 RimK-like ATP-grasp domain CXD88_RS10795 PF02875 Mur ligase family, glutamate ligase domain CXD88_RS10800 PF08245 Mur ligase middle domain CXD88_RS10800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXD88_RS10800 PF02875 Mur ligase family, glutamate ligase domain CXD88_RS10805 PF05532 CsbD-like CXD88_RS10815 PF04972 BON domain CXD88_RS10830 PF00005 ABC transporter CXD88_RS10835 PF13472 GDSL-like Lipase/Acylhydrolase family CXD88_RS10840 PF13145 PPIC-type PPIASE domain CXD88_RS10845 PF03009 Glycerophosphoryl diester phosphodiesterase family CXD88_RS10850 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CXD88_RS10855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXD88_RS10855 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS10860 PF00462 Glutaredoxin CXD88_RS10860 PF08534 Redoxin CXD88_RS10870 PF00376 MerR family regulatory protein CXD88_RS10870 PF09278 MerR, DNA binding CXD88_RS10875 PF05958 tRNA (Uracil-5-)-methyltransferase CXD88_RS10895 PF01476 LysM domain CXD88_RS10895 PF01551 Peptidase family M23 CXD88_RS10905 PF01975 Survival protein SurE CXD88_RS10910 PF02660 Glycerol-3-phosphate acyltransferase CXD88_RS10920 PF00814 Glycoprotease family CXD88_RS10925 PF00860 Permease family CXD88_RS10935 PF00085 Thioredoxin CXD88_RS10940 PF01205 Uncharacterized protein family UPF0029 CXD88_RS10950 PF00583 Acetyltransferase (GNAT) family CXD88_RS10955 PF12802 MarR family CXD88_RS10965 PF00202 Aminotransferase class-III CXD88_RS10970 PF16868 NMT1-like family CXD88_RS10990 PF03797 Autotransporter beta-domain CXD88_RS11005 PF13396 Phospholipase_D-nuclease N-terminal CXD88_RS11005 PF13091 PLD-like domain CXD88_RS11010 PF01740 STAS domain CXD88_RS11015 PF13581 Histidine kinase-like ATPase domain CXD88_RS11020 PF01168 Alanine racemase, N-terminal domain CXD88_RS11020 PF00842 Alanine racemase, C-terminal domain CXD88_RS11030 PF00672 HAMP domain CXD88_RS11030 PF07228 Stage II sporulation protein E (SpoIIE) CXD88_RS11055 PF04542 Sigma-70 region 2 CXD88_RS11055 PF08281 Sigma-70, region 4 CXD88_RS11060 PF00263 Bacterial type II and III secretion system protein CXD88_RS11060 PF03958 Bacterial type II/III secretion system short domain CXD88_RS11070 PF01312 FlhB HrpN YscU SpaS Family CXD88_RS11075 PF01311 Bacterial export proteins, family 1 CXD88_RS11080 PF01313 Bacterial export proteins, family 3 CXD88_RS11085 PF00813 FliP family CXD88_RS11090 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CXD88_RS11105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXD88_RS11105 PF18269 T3SS EscN ATPase C-terminal domain CXD88_RS11105 PF02874 ATP synthase alpha/beta family, beta-barrel domain CXD88_RS11110 PF02108 Flagellar assembly protein FliH CXD88_RS11120 PF01514 Secretory protein of YscJ/FliF family CXD88_RS11185 PF00771 FHIPEP family CXD88_RS11215 PF03449 Transcription elongation factor, N-terminal CXD88_RS11215 PF01272 Transcription elongation factor, GreA/GreB, C-term CXD88_RS11220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXD88_RS11220 PF00672 HAMP domain CXD88_RS11220 PF02203 Tar ligand binding domain homologue CXD88_RS11225 PF00860 Permease family CXD88_RS11255 PF13419 Haloacid dehalogenase-like hydrolase CXD88_RS11260 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS11265 PF00005 ABC transporter CXD88_RS11265 PF08402 TOBE domain CXD88_RS11270 PF03466 LysR substrate binding domain CXD88_RS11270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS11280 PF00581 Rhodanese-like domain CXD88_RS11290 PF01435 Peptidase family M48 CXD88_RS11295 PF08240 Alcohol dehydrogenase GroES-like domain CXD88_RS11295 PF00107 Zinc-binding dehydrogenase CXD88_RS11300 PF00892 EamA-like transporter family CXD88_RS11310 PF01047 MarR family CXD88_RS11320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXD88_RS11320 PF00529 HlyD membrane-fusion protein of T1SS CXD88_RS11325 PF07690 Major Facilitator Superfamily CXD88_RS11330 PF00180 Isocitrate/isopropylmalate dehydrogenase CXD88_RS11335 PF00155 Aminotransferase class I and II CXD88_RS11335 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS11340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS11345 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS11350 PF12911 N-terminal TM domain of oligopeptide transport permease C CXD88_RS11350 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS11355 PF00005 ABC transporter CXD88_RS11355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS11365 PF00202 Aminotransferase class-III CXD88_RS11370 PF07883 Cupin domain CXD88_RS11375 PF00850 Histone deacetylase domain CXD88_RS11380 PF01546 Peptidase family M20/M25/M40 CXD88_RS11380 PF07687 Peptidase dimerisation domain CXD88_RS11390 PF00171 Aldehyde dehydrogenase family CXD88_RS11395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXD88_RS11400 PF00202 Aminotransferase class-III CXD88_RS11405 PF01235 Sodium:alanine symporter family CXD88_RS11410 PF05872 Bacterial protein of unknown function (DUF853) CXD88_RS11415 PF01709 Transcriptional regulator CXD88_RS11420 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CXD88_RS11420 PF02844 Phosphoribosylglycinamide synthetase, N domain CXD88_RS11420 PF02843 Phosphoribosylglycinamide synthetase, C domain CXD88_RS11425 PF01218 Coproporphyrinogen III oxidase CXD88_RS11430 PF01467 Cytidylyltransferase-like CXD88_RS11440 PF02590 Predicted SPOUT methyltransferase CXD88_RS11445 PF02545 Maf-like protein CXD88_RS11450 PF03797 Autotransporter beta-domain CXD88_RS11450 PF03212 Pertactin CXD88_RS11490 PF00575 S1 RNA binding domain CXD88_RS11490 PF10150 Ribonuclease E/G family CXD88_RS11495 PF01842 ACT domain CXD88_RS11495 PF00800 Prephenate dehydratase CXD88_RS11505 PF07690 Major Facilitator Superfamily CXD88_RS11510 PF00005 ABC transporter CXD88_RS11510 PF00664 ABC transporter transmembrane region CXD88_RS11515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CXD88_RS11525 PF03692 Putative zinc- or iron-chelating domain CXD88_RS11540 PF00884 Sulfatase CXD88_RS11545 PF00534 Glycosyl transferases group 1 CXD88_RS11545 PF13439 Glycosyltransferase Family 4 CXD88_RS11550 PF00535 Glycosyl transferase family 2 CXD88_RS11555 PF01522 Polysaccharide deacetylase CXD88_RS11560 PF00534 Glycosyl transferases group 1 CXD88_RS11560 PF13439 Glycosyltransferase Family 4 CXD88_RS11565 PF07733 Bacterial DNA polymerase III alpha NTPase domain CXD88_RS11565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CXD88_RS11565 PF02811 PHP domain CXD88_RS11565 PF01336 OB-fold nucleic acid binding domain CXD88_RS11565 PF14579 Helix-hairpin-helix motif CXD88_RS11575 PF11898 Domain of unknown function (DUF3418) CXD88_RS11575 PF00271 Helicase conserved C-terminal domain CXD88_RS11575 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CXD88_RS11575 PF00270 DEAD/DEAH box helicase CXD88_RS11575 PF04408 Helicase associated domain (HA2) CXD88_RS11580 PF00583 Acetyltransferase (GNAT) family CXD88_RS11580 PF00696 Amino acid kinase family CXD88_RS11585 PF04362 Bacterial Fe(2+) trafficking CXD88_RS11590 PF04185 Phosphoesterase family CXD88_RS11590 PF05506 Domain of unknown function (DUF756) CXD88_RS11595 PF01895 PhoU domain CXD88_RS11600 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CXD88_RS11605 PF18158 Adaptive response protein AidB N-terminal domain CXD88_RS11605 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS11605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS11610 PF02646 RmuC family CXD88_RS11620 PF02245 Methylpurine-DNA glycosylase (MPG) CXD88_RS11630 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS11635 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS11640 PF08402 TOBE domain CXD88_RS11640 PF00005 ABC transporter CXD88_RS11645 PF13416 Bacterial extracellular solute-binding protein CXD88_RS11665 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS11675 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CXD88_RS11675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS11690 PF00285 Citrate synthase, C-terminal domain CXD88_RS11695 PF03937 Flavinator of succinate dehydrogenase CXD88_RS11700 PF13085 2Fe-2S iron-sulfur cluster binding domain CXD88_RS11705 PF00890 FAD binding domain CXD88_RS11705 PF02910 Fumarate reductase flavoprotein C-term CXD88_RS11710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CXD88_RS11715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CXD88_RS11720 PF07702 UTRA domain CXD88_RS11720 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS11725 PF00056 lactate/malate dehydrogenase, NAD binding domain CXD88_RS11725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CXD88_RS11735 PF00285 Citrate synthase, C-terminal domain CXD88_RS11740 PF00330 Aconitase family (aconitate hydratase) CXD88_RS11740 PF00694 Aconitase C-terminal domain CXD88_RS11745 PF04303 PrpF protein CXD88_RS11750 PF03972 MmgE/PrpD family CXD88_RS11755 PF03653 Uncharacterised protein family (UPF0093) CXD88_RS11760 PF02926 THUMP domain CXD88_RS11760 PF01170 Putative RNA methylase family UPF0020 CXD88_RS11780 PF00501 AMP-binding enzyme CXD88_RS11780 PF16177 Acetyl-coenzyme A synthetase N-terminus CXD88_RS11780 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS11790 PF01430 Hsp33 protein CXD88_RS11815 PF00211 Adenylate and Guanylate cyclase catalytic domain CXD88_RS11820 PF04977 Septum formation initiator CXD88_RS11825 PF03952 Enolase, N-terminal domain CXD88_RS11825 PF00113 Enolase, C-terminal TIM barrel domain CXD88_RS11835 PF00793 DAHP synthetase I family CXD88_RS11840 PF00117 Glutamine amidotransferase class-I CXD88_RS11840 PF06418 CTP synthase N-terminus CXD88_RS11850 PF01321 Creatinase/Prolidase N-terminal domain CXD88_RS11850 PF00557 Metallopeptidase family M24 CXD88_RS11860 PF03576 Peptidase family S58 CXD88_RS11865 PF12911 N-terminal TM domain of oligopeptide transport permease C CXD88_RS11865 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS11870 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS11875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS11880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS11880 PF00005 ABC transporter CXD88_RS11885 PF01112 Asparaginase CXD88_RS11895 PF01144 Coenzyme A transferase CXD88_RS11915 PF16363 GDP-mannose 4,6 dehydratase CXD88_RS11930 PF01212 Beta-eliminating lyase CXD88_RS11935 PF00892 EamA-like transporter family CXD88_RS11940 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS11940 PF16177 Acetyl-coenzyme A synthetase N-terminus CXD88_RS11940 PF00501 AMP-binding enzyme CXD88_RS11950 PF03928 Haem-degrading CXD88_RS11960 PF00877 NlpC/P60 family CXD88_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS11975 PF03466 LysR substrate binding domain CXD88_RS11980 PF00171 Aldehyde dehydrogenase family CXD88_RS11990 PF03466 LysR substrate binding domain CXD88_RS11990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS12000 PF00883 Cytosol aminopeptidase family, catalytic domain CXD88_RS12000 PF02789 Cytosol aminopeptidase family, N-terminal domain CXD88_RS12005 PF04364 DNA polymerase III chi subunit, HolC CXD88_RS12015 PF01027 Inhibitor of apoptosis-promoting Bax1 CXD88_RS12020 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS12035 PF00291 Pyridoxal-phosphate dependent enzyme CXD88_RS12045 PF11967 Recombination protein O N terminal CXD88_RS12045 PF02565 Recombination protein O C terminal CXD88_RS12050 PF07650 KH domain CXD88_RS12050 PF01926 50S ribosome-binding GTPase CXD88_RS12055 PF14622 Ribonuclease-III-like CXD88_RS12055 PF00035 Double-stranded RNA binding motif CXD88_RS12060 PF10502 Signal peptidase, peptidase S26 CXD88_RS12065 PF00679 Elongation factor G C-terminus CXD88_RS12065 PF00009 Elongation factor Tu GTP binding domain CXD88_RS12065 PF06421 GTP-binding protein LepA C-terminus CXD88_RS12065 PF03144 Elongation factor Tu domain 2 CXD88_RS12070 PF13180 PDZ domain CXD88_RS12085 PF08281 Sigma-70, region 4 CXD88_RS12085 PF04542 Sigma-70 region 2 CXD88_RS12095 PF02801 Beta-ketoacyl synthase, C-terminal domain CXD88_RS12095 PF00109 Beta-ketoacyl synthase, N-terminal domain CXD88_RS12100 PF00550 Phosphopantetheine attachment site CXD88_RS12110 PF00698 Acyl transferase domain CXD88_RS12115 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CXD88_RS12115 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CXD88_RS12120 PF02504 Fatty acid synthesis protein CXD88_RS12125 PF01783 Ribosomal L32p protein family CXD88_RS12130 PF02620 Large ribosomal RNA subunit accumulation protein YceD CXD88_RS12135 PF02545 Maf-like protein CXD88_RS12145 PF01510 N-acetylmuramoyl-L-alanine amidase CXD88_RS12160 PF03883 Peroxide stress protein YaaA CXD88_RS12175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CXD88_RS12180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS12190 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS12195 PF01416 tRNA pseudouridine synthase CXD88_RS12205 PF02774 Semialdehyde dehydrogenase, dimerisation domain CXD88_RS12205 PF01118 Semialdehyde dehydrogenase, NAD binding domain CXD88_RS12210 PF00180 Isocitrate/isopropylmalate dehydrogenase CXD88_RS12215 PF00694 Aconitase C-terminal domain CXD88_RS12220 PF00330 Aconitase family (aconitate hydratase) CXD88_RS12225 PF12849 PBP superfamily domain CXD88_RS12230 PF00005 ABC transporter CXD88_RS12265 PF01568 Molydopterin dinucleotide binding domain CXD88_RS12265 PF00384 Molybdopterin oxidoreductase CXD88_RS12265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CXD88_RS12295 PF10609 NUBPL iron-transfer P-loop NTPase CXD88_RS12300 PF12804 MobA-like NTP transferase domain CXD88_RS12305 PF03453 MoeA N-terminal region (domain I and II) CXD88_RS12305 PF03454 MoeA C-terminal region (domain IV) CXD88_RS12305 PF00994 Probable molybdopterin binding domain CXD88_RS12310 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CXD88_RS12315 PF01435 Peptidase family M48 CXD88_RS12320 PF01264 Chorismate synthase CXD88_RS12325 PF08448 PAS fold CXD88_RS12325 PF00990 Diguanylate cyclase, GGDEF domain CXD88_RS12325 PF00563 EAL domain CXD88_RS12325 PF08447 PAS fold CXD88_RS12340 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS12345 PF00005 ABC transporter CXD88_RS12345 PF08402 TOBE domain CXD88_RS12350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS12350 PF03466 LysR substrate binding domain CXD88_RS12355 PF00300 Histidine phosphatase superfamily (branch 1) CXD88_RS12365 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CXD88_RS12365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXD88_RS12365 PF02142 MGS-like domain CXD88_RS12370 PF00117 Glutamine amidotransferase class-I CXD88_RS12370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CXD88_RS12375 PF00923 Transaldolase/Fructose-6-phosphate aldolase CXD88_RS12405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CXD88_RS12405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CXD88_RS12410 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS12415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS12415 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS12415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS12420 PF03658 RnfH family Ubiquitin CXD88_RS12425 PF03364 Polyketide cyclase / dehydrase and lipid transport CXD88_RS12435 PF01668 SmpB protein CXD88_RS12440 PF08448 PAS fold CXD88_RS12440 PF00990 Diguanylate cyclase, GGDEF domain CXD88_RS12445 PF01145 SPFH domain / Band 7 family CXD88_RS12445 PF16200 C-terminal region of band_7 CXD88_RS12460 PF00117 Glutamine amidotransferase class-I CXD88_RS12460 PF00958 GMP synthase C terminal domain CXD88_RS12465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CXD88_RS12465 PF02896 PEP-utilising enzyme, TIM barrel domain CXD88_RS12465 PF00391 PEP-utilising enzyme, mobile domain CXD88_RS12470 PF03618 Kinase/pyrophosphorylase CXD88_RS12475 PF08032 RNA 2'-O ribose methyltransferase substrate binding CXD88_RS12475 PF00588 SpoU rRNA Methylase family CXD88_RS12480 PF01351 Ribonuclease HII CXD88_RS12485 PF02684 Lipid-A-disaccharide synthetase CXD88_RS12490 PF00132 Bacterial transferase hexapeptide (six repeats) CXD88_RS12490 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CXD88_RS12495 PF07977 FabA-like domain CXD88_RS12500 PF00132 Bacterial transferase hexapeptide (six repeats) CXD88_RS12500 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CXD88_RS12505 PF03938 Outer membrane protein (OmpH-like) CXD88_RS12510 PF01103 Surface antigen CXD88_RS12510 PF07244 Surface antigen variable number repeat CXD88_RS12515 PF17820 PDZ domain CXD88_RS12515 PF02163 Peptidase family M50 CXD88_RS12520 PF13288 DXP reductoisomerase C-terminal domain CXD88_RS12520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CXD88_RS12520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CXD88_RS12530 PF01255 Putative undecaprenyl diphosphate synthase CXD88_RS12535 PF01765 Ribosome recycling factor CXD88_RS12540 PF00696 Amino acid kinase family CXD88_RS12545 PF00889 Elongation factor TS CXD88_RS12550 PF00318 Ribosomal protein S2 CXD88_RS12555 PF00557 Metallopeptidase family M24 CXD88_RS12560 PF01909 Nucleotidyltransferase domain CXD88_RS12560 PF01966 HD domain CXD88_RS12560 PF08335 GlnD PII-uridylyltransferase CXD88_RS12575 PF00156 Phosphoribosyl transferase domain CXD88_RS12590 PF08245 Mur ligase middle domain CXD88_RS12590 PF02875 Mur ligase family, glutamate ligase domain CXD88_RS12600 PF02465 Flagellar hook-associated protein 2 N-terminus CXD88_RS12600 PF07195 Flagellar hook-associated protein 2 C-terminus CXD88_RS12600 PF07196 Flagellin hook IN motif CXD88_RS12605 PF02561 Flagellar protein FliS CXD88_RS12625 PF01312 FlhB HrpN YscU SpaS Family CXD88_RS12635 PF02049 Flagellar hook-basal body complex protein FliE CXD88_RS12640 PF08345 Flagellar M-ring protein C-terminal CXD88_RS12640 PF01514 Secretory protein of YscJ/FliF family CXD88_RS12645 PF01706 FliG C-terminal domain CXD88_RS12645 PF14841 FliG middle domain CXD88_RS12645 PF14842 FliG N-terminal domain CXD88_RS12650 PF02108 Flagellar assembly protein FliH CXD88_RS12655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXD88_RS12655 PF18269 T3SS EscN ATPase C-terminal domain CXD88_RS12680 PF03748 Flagellar basal body-associated protein FliL CXD88_RS12685 PF02154 Flagellar motor switch protein FliM CXD88_RS12685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CXD88_RS12690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CXD88_RS12690 PF16973 Flagellar motor switch protein FliN N-terminal CXD88_RS12695 PF04347 Flagellar biosynthesis protein, FliO CXD88_RS12700 PF00813 FliP family CXD88_RS12705 PF01313 Bacterial export proteins, family 3 CXD88_RS12710 PF01311 Bacterial export proteins, family 1 CXD88_RS12720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXD88_RS12720 PF08447 PAS fold CXD88_RS12725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXD88_RS12725 PF02203 Tar ligand binding domain homologue CXD88_RS12725 PF00672 HAMP domain CXD88_RS12730 PF02203 Tar ligand binding domain homologue CXD88_RS12730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXD88_RS12730 PF00672 HAMP domain CXD88_RS12735 PF00669 Bacterial flagellin N-terminal helical region CXD88_RS12740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXD88_RS12740 PF00460 Flagella basal body rod protein CXD88_RS12745 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CXD88_RS12745 PF10135 Rod binding protein CXD88_RS12750 PF02119 Flagellar P-ring protein CXD88_RS12755 PF02107 Flagellar L-ring protein CXD88_RS12760 PF00460 Flagella basal body rod protein CXD88_RS12760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXD88_RS12765 PF00460 Flagella basal body rod protein CXD88_RS12765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXD88_RS12770 PF00460 Flagella basal body rod protein CXD88_RS12770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXD88_RS12770 PF07559 Flagellar basal body protein FlaE CXD88_RS12775 PF13861 FlgD Tudor-like domain CXD88_RS12775 PF13860 FlgD Ig-like domain CXD88_RS12775 PF03963 Flagellar hook capping protein - N-terminal region CXD88_RS12780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CXD88_RS12780 PF00460 Flagella basal body rod protein CXD88_RS12785 PF00460 Flagella basal body rod protein CXD88_RS12795 PF04316 Anti-sigma-28 factor, FlgM CXD88_RS12815 PF01312 FlhB HrpN YscU SpaS Family CXD88_RS12825 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS12830 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS12835 PF00005 ABC transporter CXD88_RS12845 PF02558 Ketopantoate reductase PanE/ApbA CXD88_RS12845 PF08546 Ketopantoate reductase PanE/ApbA C terminal CXD88_RS12850 PF13378 Enolase C-terminal domain-like CXD88_RS12855 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS12865 PF00694 Aconitase C-terminal domain CXD88_RS12870 PF00356 Bacterial regulatory proteins, lacI family CXD88_RS12875 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS12880 PF02515 CoA-transferase family III CXD88_RS12890 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS12895 PF13380 CoA binding domain CXD88_RS12895 PF13607 Succinyl-CoA ligase like flavodoxin domain CXD88_RS12900 PF07729 FCD domain CXD88_RS12900 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS12905 PF03328 HpcH/HpaI aldolase/citrate lyase family CXD88_RS12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS12915 PF03466 LysR substrate binding domain CXD88_RS12925 PF12951 Passenger-associated-transport-repeat CXD88_RS12935 PF03551 Transcriptional regulator PadR-like family CXD88_RS12945 PF03372 Endonuclease/Exonuclease/phosphatase family CXD88_RS12950 PF13091 PLD-like domain CXD88_RS12995 PF00128 Alpha amylase, catalytic domain CXD88_RS12995 PF16657 Maltogenic Amylase, C-terminal domain CXD88_RS13000 PF00128 Alpha amylase, catalytic domain CXD88_RS13000 PF02806 Alpha amylase, C-terminal all-beta domain CXD88_RS13000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CXD88_RS13005 PF00128 Alpha amylase, catalytic domain CXD88_RS13005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CXD88_RS13010 PF00128 Alpha amylase, catalytic domain CXD88_RS13010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CXD88_RS13010 PF11941 Domain of unknown function (DUF3459) CXD88_RS13020 PF00128 Alpha amylase, catalytic domain CXD88_RS13030 PF08543 Phosphomethylpyrimidine kinase CXD88_RS13035 PF01168 Alanine racemase, N-terminal domain CXD88_RS13040 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS13040 PF00155 Aminotransferase class I and II CXD88_RS13055 PF00582 Universal stress protein family CXD88_RS13060 PF00248 Aldo/keto reductase family CXD88_RS13075 PF07681 DoxX CXD88_RS13095 PF00578 AhpC/TSA family CXD88_RS13100 PF03960 ArsC family CXD88_RS13105 PF02515 CoA-transferase family III CXD88_RS13125 PF00255 Glutathione peroxidase CXD88_RS13130 PF02798 Glutathione S-transferase, N-terminal domain CXD88_RS13130 PF00043 Glutathione S-transferase, C-terminal domain CXD88_RS13145 PF03099 Biotin/lipoate A/B protein ligase family CXD88_RS13145 PF10437 Bacterial lipoate protein ligase C-terminus CXD88_RS13160 PF02666 Phosphatidylserine decarboxylase CXD88_RS13165 PF01070 FMN-dependent dehydrogenase CXD88_RS13170 PF03180 NLPA lipoprotein CXD88_RS13175 PF08808 RES domain CXD88_RS13185 PF04241 Protein of unknown function (DUF423) CXD88_RS13205 PF13458 Periplasmic binding protein CXD88_RS13210 PF00005 ABC transporter CXD88_RS13210 PF17912 MalK OB fold domain CXD88_RS13215 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS13220 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS13225 PF13416 Bacterial extracellular solute-binding protein CXD88_RS13230 PF14748 Pyrroline-5-carboxylate reductase dimerisation CXD88_RS13230 PF03807 NADP oxidoreductase coenzyme F420-dependent CXD88_RS13235 PF02592 Putative vitamin uptake transporter CXD88_RS13250 PF13458 Periplasmic binding protein CXD88_RS13255 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS13260 PF11862 Domain of unknown function (DUF3382) CXD88_RS13260 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS13265 PF00005 ABC transporter CXD88_RS13265 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS13270 PF00005 ABC transporter CXD88_RS13275 PF01177 Asp/Glu/Hydantoin racemase CXD88_RS13300 PF04235 Protein of unknown function (DUF418) CXD88_RS13305 PF00521 DNA gyrase/topoisomerase IV, subunit A CXD88_RS13315 PF00204 DNA gyrase B CXD88_RS13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS13315 PF01751 Toprim domain CXD88_RS13315 PF00986 DNA gyrase B subunit, carboxyl terminus CXD88_RS13320 PF00085 Thioredoxin CXD88_RS13325 PF07498 Rho termination factor, N-terminal domain CXD88_RS13325 PF07497 Rho termination factor, RNA-binding domain CXD88_RS13325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CXD88_RS13335 PF08335 GlnD PII-uridylyltransferase CXD88_RS13335 PF03710 Glutamate-ammonia ligase adenylyltransferase CXD88_RS13340 PF02677 Epoxyqueuosine reductase QueH CXD88_RS13345 PF03315 Serine dehydratase beta chain CXD88_RS13345 PF03313 Serine dehydratase alpha chain CXD88_RS13350 PF02690 Na+/Pi-cotransporter CXD88_RS13355 PF01738 Dienelactone hydrolase family CXD88_RS13365 PF01367 5'-3' exonuclease, C-terminal SAM fold CXD88_RS13365 PF01612 3'-5' exonuclease CXD88_RS13365 PF00476 DNA polymerase family A CXD88_RS13365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CXD88_RS13370 PF03641 Possible lysine decarboxylase CXD88_RS13385 PF03144 Elongation factor Tu domain 2 CXD88_RS13385 PF00679 Elongation factor G C-terminus CXD88_RS13385 PF00009 Elongation factor Tu GTP binding domain CXD88_RS13390 PF01509 TruB family pseudouridylate synthase (N terminal domain) CXD88_RS13390 PF16198 tRNA pseudouridylate synthase B C-terminal domain CXD88_RS13395 PF02033 Ribosome-binding factor A CXD88_RS13400 PF00009 Elongation factor Tu GTP binding domain CXD88_RS13400 PF11987 Translation-initiation factor 2 CXD88_RS13400 PF04760 Translation initiation factor IF-2, N-terminal region CXD88_RS13400 PF08364 Bacterial translation initiation factor IF-2 associated region CXD88_RS13405 PF13184 NusA-like KH domain CXD88_RS13405 PF08529 NusA N-terminal domain CXD88_RS13410 PF02576 RimP N-terminal domain CXD88_RS13410 PF17384 RimP C-terminal SH3 domain CXD88_RS13415 PF00849 RNA pseudouridylate synthase CXD88_RS13415 PF01479 S4 domain CXD88_RS13420 PF04079 Segregation and condensation complex subunit ScpB CXD88_RS13430 PF03466 LysR substrate binding domain CXD88_RS13430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS13435 PF00881 Nitroreductase family CXD88_RS13440 PF07683 Cobalamin synthesis protein cobW C-terminal domain CXD88_RS13440 PF02492 CobW/HypB/UreG, nucleotide-binding domain CXD88_RS13460 PF14497 Glutathione S-transferase, C-terminal domain CXD88_RS13460 PF02798 Glutathione S-transferase, N-terminal domain CXD88_RS13465 PF02401 LytB protein CXD88_RS13470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CXD88_RS13475 PF04002 RadC-like JAB domain CXD88_RS13480 PF04199 Putative cyclase CXD88_RS13485 PF03301 Tryptophan 2,3-dioxygenase CXD88_RS13490 PF01197 Ribosomal protein L31 CXD88_RS13500 PF01554 MatE CXD88_RS13515 PF18073 Rubredoxin metal binding domain CXD88_RS13520 PF00092 von Willebrand factor type A domain CXD88_RS13520 PF12450 von Willebrand factor CXD88_RS13520 PF12034 Domain of unknown function (DUF3520) CXD88_RS13525 PF04542 Sigma-70 region 2 CXD88_RS13525 PF04545 Sigma-70, region 4 CXD88_RS13545 PF01168 Alanine racemase, N-terminal domain CXD88_RS13545 PF00842 Alanine racemase, C-terminal domain CXD88_RS13560 PF01593 Flavin containing amine oxidoreductase CXD88_RS13560 PF01593 Flavin containing amine oxidoreductase CXD88_RS13565 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CXD88_RS13575 PF01061 ABC-2 type transporter CXD88_RS13580 PF00005 ABC transporter CXD88_RS13600 PF02424 ApbE family CXD88_RS13605 PF00258 Flavodoxin CXD88_RS13605 PF00175 Oxidoreductase NAD-binding domain CXD88_RS13605 PF00667 FAD binding domain CXD88_RS13615 PF07969 Amidohydrolase family CXD88_RS13620 PF03466 LysR substrate binding domain CXD88_RS13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS13630 PF09370 Phosphoenolpyruvate hydrolase-like CXD88_RS13645 PF03797 Autotransporter beta-domain CXD88_RS13645 PF03212 Pertactin CXD88_RS13665 PF00004 ATPase family associated with various cellular activities (AAA) CXD88_RS13665 PF07724 AAA domain (Cdc48 subfamily) CXD88_RS13665 PF17871 AAA lid domain CXD88_RS13665 PF02861 Clp amino terminal domain, pathogenicity island component CXD88_RS13665 PF10431 C-terminal, D2-small domain, of ClpB protein CXD88_RS13670 PF00027 Cyclic nucleotide-binding domain CXD88_RS13670 PF13545 Crp-like helix-turn-helix domain CXD88_RS13685 PF00293 NUDIX domain CXD88_RS13690 PF12843 Putative quorum-sensing-regulated virulence factor CXD88_RS13700 PF12680 SnoaL-like domain CXD88_RS13700 PF04542 Sigma-70 region 2 CXD88_RS13700 PF08281 Sigma-70, region 4 CXD88_RS13705 PF02627 Carboxymuconolactone decarboxylase family CXD88_RS13735 PF00155 Aminotransferase class I and II CXD88_RS13740 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS13745 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS13750 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS13755 PF00005 ABC transporter CXD88_RS13780 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CXD88_RS13805 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS13810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CXD88_RS13810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CXD88_RS13815 PF03466 LysR substrate binding domain CXD88_RS13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS13825 PF02016 LD-carboxypeptidase N-terminal domain CXD88_RS13825 PF17676 LD-carboxypeptidase C-terminal domain CXD88_RS13840 PF07690 Major Facilitator Superfamily CXD88_RS13850 PF03466 LysR substrate binding domain CXD88_RS13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS13855 PF13378 Enolase C-terminal domain-like CXD88_RS13855 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CXD88_RS13860 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS13880 PF02567 Phenazine biosynthesis-like protein CXD88_RS13890 PF03239 Iron permease FTR1 family CXD88_RS13900 PF10634 Fe2+ transport protein CXD88_RS13905 PF05233 PHB accumulation regulatory domain CXD88_RS13905 PF07879 PHB/PHA accumulation regulator DNA-binding domain CXD88_RS13910 PF00106 short chain dehydrogenase CXD88_RS13915 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CXD88_RS13920 PF02578 Multi-copper polyphenol oxidoreductase laccase CXD88_RS13925 PF00849 RNA pseudouridylate synthase CXD88_RS13925 PF01479 S4 domain CXD88_RS13930 PF13525 Outer membrane lipoprotein CXD88_RS13935 PF04851 Type III restriction enzyme, res subunit CXD88_RS13935 PF13307 Helicase C-terminal domain CXD88_RS13940 PF17674 HHH domain CXD88_RS13940 PF00575 S1 RNA binding domain CXD88_RS13940 PF09371 Tex-like protein N-terminal domain CXD88_RS13940 PF16921 Tex protein YqgF-like domain CXD88_RS13945 PF00579 tRNA synthetases class I (W and Y) CXD88_RS13970 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS13980 PF03466 LysR substrate binding domain CXD88_RS13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS13990 PF03969 AFG1-like ATPase CXD88_RS13995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS13995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXD88_RS14000 PF00364 Biotin-requiring enzyme CXD88_RS14000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CXD88_RS14000 PF02817 e3 binding domain CXD88_RS14005 PF16870 2-oxoglutarate dehydrogenase C-terminal CXD88_RS14005 PF00676 Dehydrogenase E1 component CXD88_RS14005 PF16078 2-oxoglutarate dehydrogenase N-terminus CXD88_RS14005 PF02779 Transketolase, pyrimidine binding domain CXD88_RS14015 PF01037 Lrp/AsnC ligand binding domain CXD88_RS14020 PF00456 Transketolase, thiamine diphosphate binding domain CXD88_RS14020 PF17831 Pyruvate dehydrogenase E1 component middle domain CXD88_RS14025 PF00390 Malic enzyme, N-terminal domain CXD88_RS14025 PF01515 Phosphate acetyl/butaryl transferase CXD88_RS14025 PF03949 Malic enzyme, NAD binding domain CXD88_RS14030 PF16970 Type-1 fimbrial protein, A CXD88_RS14045 PF01272 Transcription elongation factor, GreA/GreB, C-term CXD88_RS14045 PF03449 Transcription elongation factor, N-terminal CXD88_RS14050 PF02811 PHP domain CXD88_RS14060 PF00753 Metallo-beta-lactamase superfamily CXD88_RS14060 PF03772 Competence protein CXD88_RS14060 PF13567 Domain of unknown function (DUF4131) CXD88_RS14085 PF01026 TatD related DNase CXD88_RS14090 PF00005 ABC transporter CXD88_RS14095 PF02687 FtsX-like permease family CXD88_RS14095 PF12704 MacB-like periplasmic core domain CXD88_RS14105 PF01368 DHH family CXD88_RS14105 PF17768 RecJ OB domain CXD88_RS14105 PF02272 DHHA1 domain CXD88_RS14115 PF00106 short chain dehydrogenase CXD88_RS14120 PF00152 tRNA synthetases class II (D, K and N) CXD88_RS14120 PF01336 OB-fold nucleic acid binding domain CXD88_RS14130 PF00440 Bacterial regulatory proteins, tetR family CXD88_RS14130 PF17932 Tetracyclin repressor-like, C-terminal domain CXD88_RS14135 PF00501 AMP-binding enzyme CXD88_RS14140 PF00005 ABC transporter CXD88_RS14160 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS14160 PF00005 ABC transporter CXD88_RS14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS14180 PF07689 KaiB domain CXD88_RS14180 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS14185 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS14185 PF00072 Response regulator receiver domain CXD88_RS14190 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CXD88_RS14200 PF03631 Virulence factor BrkB CXD88_RS14215 PF01207 Dihydrouridine synthase (Dus) CXD88_RS14220 PF01636 Phosphotransferase enzyme family CXD88_RS14245 PF01985 CRS1 / YhbY (CRM) domain CXD88_RS14250 PF01728 FtsJ-like methyltransferase CXD88_RS14255 PF06480 FtsH Extracellular CXD88_RS14255 PF01434 Peptidase family M41 CXD88_RS14255 PF00004 ATPase family associated with various cellular activities (AAA) CXD88_RS14255 PF17862 AAA+ lid domain CXD88_RS14260 PF00809 Pterin binding enzyme CXD88_RS14265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CXD88_RS14265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CXD88_RS14265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CXD88_RS14265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CXD88_RS14275 PF02541 Ppx/GppA phosphatase family CXD88_RS14280 PF17941 Polyphosphate kinase C-terminal domain 1 CXD88_RS14280 PF02503 Polyphosphate kinase middle domain CXD88_RS14280 PF13089 Polyphosphate kinase N-terminal domain CXD88_RS14280 PF13090 Polyphosphate kinase C-terminal domain 2 CXD88_RS14285 PF12849 PBP superfamily domain CXD88_RS14290 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS14295 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS14300 PF00005 ABC transporter CXD88_RS14315 PF01337 Barstar (barnase inhibitor) CXD88_RS14325 PF03949 Malic enzyme, NAD binding domain CXD88_RS14325 PF00390 Malic enzyme, N-terminal domain CXD88_RS14325 PF01515 Phosphate acetyl/butaryl transferase CXD88_RS14335 PF00155 Aminotransferase class I and II CXD88_RS14345 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CXD88_RS14345 PF01464 Transglycosylase SLT domain CXD88_RS14350 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CXD88_RS14375 PF10414 Sirohaem synthase dimerisation region CXD88_RS14375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CXD88_RS14375 PF14824 Sirohaem biosynthesis protein central CXD88_RS14380 PF03212 Pertactin CXD88_RS14380 PF03797 Autotransporter beta-domain CXD88_RS14395 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CXD88_RS14400 PF02547 Queuosine biosynthesis protein CXD88_RS14405 PF01702 Queuine tRNA-ribosyltransferase CXD88_RS14410 PF02699 Preprotein translocase subunit CXD88_RS14415 PF02355 Protein export membrane protein CXD88_RS14415 PF07549 SecD/SecF GG Motif CXD88_RS14415 PF13721 SecD export protein N-terminal TM region CXD88_RS14420 PF07549 SecD/SecF GG Motif CXD88_RS14420 PF02355 Protein export membrane protein CXD88_RS14435 PF00919 Uncharacterized protein family UPF0004 CXD88_RS14435 PF04055 Radical SAM superfamily CXD88_RS14435 PF01938 TRAM domain CXD88_RS14440 PF02562 PhoH-like protein CXD88_RS14445 PF02130 Uncharacterized protein family UPF0054 CXD88_RS14450 PF00571 CBS domain CXD88_RS14450 PF03471 Transporter associated domain CXD88_RS14455 PF00795 Carbon-nitrogen hydrolase CXD88_RS14460 PF00248 Aldo/keto reductase family CXD88_RS14485 PF04344 Chemotaxis phosphatase, CheZ CXD88_RS14490 PF00072 Response regulator receiver domain CXD88_RS14495 PF00072 Response regulator receiver domain CXD88_RS14495 PF01339 CheB methylesterase CXD88_RS14505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CXD88_RS14505 PF02203 Tar ligand binding domain homologue CXD88_RS14505 PF00672 HAMP domain CXD88_RS14510 PF01584 CheW-like domain CXD88_RS14515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS14515 PF01627 Hpt domain CXD88_RS14515 PF02895 Signal transducing histidine kinase, homodimeric domain CXD88_RS14515 PF09078 CheY binding CXD88_RS14515 PF01584 CheW-like domain CXD88_RS14520 PF00072 Response regulator receiver domain CXD88_RS14525 PF13677 Membrane MotB of proton-channel complex MotA/MotB CXD88_RS14525 PF00691 OmpA family CXD88_RS14530 PF01618 MotA/TolQ/ExbB proton channel family CXD88_RS14535 PF05280 Flagellar transcriptional activator (FlhC) CXD88_RS14540 PF05247 Flagellar transcriptional activator (FlhD) CXD88_RS14545 PF04539 Sigma-70 region 3 CXD88_RS14545 PF04545 Sigma-70, region 4 CXD88_RS14545 PF04542 Sigma-70 region 2 CXD88_RS14555 PF01176 Translation initiation factor 1A / IF-1 CXD88_RS14565 PF08525 Opacity-associated protein A N-terminal motif CXD88_RS14565 PF01551 Peptidase family M23 CXD88_RS14565 PF01476 LysM domain CXD88_RS14575 PF00994 Probable molybdopterin binding domain CXD88_RS14585 PF03591 AzlC protein CXD88_RS14595 PF01556 DnaJ C terminal domain CXD88_RS14595 PF00226 DnaJ domain CXD88_RS14615 PF14834 Glutathione S-transferase, C-terminal domain CXD88_RS14615 PF02798 Glutathione S-transferase, N-terminal domain CXD88_RS14620 PF11339 Protein of unknown function (DUF3141) CXD88_RS14625 PF01515 Phosphate acetyl/butaryl transferase CXD88_RS14630 PF00871 Acetokinase family CXD88_RS14640 PF00162 Phosphoglycerate kinase CXD88_RS14645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CXD88_RS14645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CXD88_RS14650 PF00456 Transketolase, thiamine diphosphate binding domain CXD88_RS14650 PF02780 Transketolase, C-terminal domain CXD88_RS14650 PF02779 Transketolase, pyrimidine binding domain CXD88_RS14655 PF04452 RNA methyltransferase CXD88_RS14665 PF00669 Bacterial flagellin N-terminal helical region CXD88_RS14665 PF00700 Bacterial flagellin C-terminal helical region CXD88_RS14670 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS14670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXD88_RS14675 PF02817 e3 binding domain CXD88_RS14675 PF00364 Biotin-requiring enzyme CXD88_RS14675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CXD88_RS14680 PF17831 Pyruvate dehydrogenase E1 component middle domain CXD88_RS14680 PF00456 Transketolase, thiamine diphosphate binding domain CXD88_RS14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS14685 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS14685 PF00989 PAS fold CXD88_RS14690 PF00196 Bacterial regulatory proteins, luxR family CXD88_RS14690 PF00072 Response regulator receiver domain CXD88_RS14695 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CXD88_RS14695 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CXD88_RS14700 PF01432 Peptidase family M3 CXD88_RS14705 PF02630 SCO1/SenC CXD88_RS14715 PF02321 Outer membrane efflux protein CXD88_RS14720 PF00873 AcrB/AcrD/AcrF family CXD88_RS14730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS14730 PF03466 LysR substrate binding domain CXD88_RS14735 PF01479 S4 domain CXD88_RS14735 PF00849 RNA pseudouridylate synthase CXD88_RS14740 PF04345 Chorismate lyase CXD88_RS14755 PF00248 Aldo/keto reductase family CXD88_RS14765 PF00293 NUDIX domain CXD88_RS14770 PF01245 Ribosomal protein L19 CXD88_RS14785 PF04055 Radical SAM superfamily CXD88_RS14795 PF01507 Phosphoadenosine phosphosulfate reductase family CXD88_RS14805 PF12857 TOBE-like domain CXD88_RS14805 PF17850 CysA C-terminal regulatory domain CXD88_RS14805 PF00005 ABC transporter CXD88_RS14825 PF10417 C-terminal domain of 1-Cys peroxiredoxin CXD88_RS14825 PF00578 AhpC/TSA family CXD88_RS14830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS14830 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS14830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS14830 PF12806 Acetyl-CoA dehydrogenase C-terminal like CXD88_RS14835 PF01012 Electron transfer flavoprotein domain CXD88_RS14835 PF00766 Electron transfer flavoprotein FAD-binding domain CXD88_RS14840 PF01012 Electron transfer flavoprotein domain CXD88_RS14845 PF00850 Histone deacetylase domain CXD88_RS14850 PF13406 Transglycosylase SLT domain CXD88_RS14855 PF00291 Pyridoxal-phosphate dependent enzyme CXD88_RS14865 PF10531 SLBB domain CXD88_RS14870 PF01370 NAD dependent epimerase/dehydratase family CXD88_RS14875 PF00294 pfkB family carbohydrate kinase CXD88_RS14880 PF18073 Rubredoxin metal binding domain CXD88_RS14890 PF00216 Bacterial DNA-binding protein CXD88_RS14895 PF00575 S1 RNA binding domain CXD88_RS14900 PF02224 Cytidylate kinase CXD88_RS14905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CXD88_RS14910 PF02153 Prephenate dehydrogenase CXD88_RS14915 PF01817 Chorismate mutase type II CXD88_RS14915 PF01842 ACT domain CXD88_RS14915 PF00800 Prephenate dehydratase CXD88_RS14920 PF00266 Aminotransferase class-V CXD88_RS14925 PF00521 DNA gyrase/topoisomerase IV, subunit A CXD88_RS14925 PF03989 DNA gyrase C-terminal domain, beta-propeller CXD88_RS14930 PF00691 OmpA family CXD88_RS14940 PF13419 Haloacid dehalogenase-like hydrolase CXD88_RS14945 PF07690 Major Facilitator Superfamily CXD88_RS14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS14980 PF03466 LysR substrate binding domain CXD88_RS14985 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS14995 PF00817 impB/mucB/samB family CXD88_RS14995 PF11799 impB/mucB/samB family C-terminal domain CXD88_RS14995 PF11798 IMS family HHH motif CXD88_RS15010 PF00326 Prolyl oligopeptidase family CXD88_RS15015 PF17092 Penicillin-binding protein OB-like domain CXD88_RS15015 PF00912 Transglycosylase CXD88_RS15015 PF00905 Penicillin binding protein transpeptidase domain CXD88_RS15020 PF00149 Calcineurin-like phosphoesterase CXD88_RS15035 PF00248 Aldo/keto reductase family CXD88_RS15040 PF00248 Aldo/keto reductase family CXD88_RS15045 PF00005 ABC transporter CXD88_RS15045 PF00664 ABC transporter transmembrane region CXD88_RS15095 PF00289 Biotin carboxylase, N-terminal domain CXD88_RS15095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXD88_RS15095 PF02785 Biotin carboxylase C-terminal domain CXD88_RS15100 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS15100 PF07702 UTRA domain CXD88_RS15120 PF00364 Biotin-requiring enzyme CXD88_RS15120 PF02436 Conserved carboxylase domain CXD88_RS15120 PF00682 HMGL-like CXD88_RS15125 PF00364 Biotin-requiring enzyme CXD88_RS15135 PF01966 HD domain CXD88_RS15155 PF07317 Flagellar regulator YcgR CXD88_RS15155 PF07238 PilZ domain CXD88_RS15175 PF05724 Thiopurine S-methyltransferase (TPMT) CXD88_RS15180 PF00664 ABC transporter transmembrane region CXD88_RS15180 PF00005 ABC transporter CXD88_RS15195 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS15195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS15195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS15200 PF10369 Small subunit of acetolactate synthase CXD88_RS15205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CXD88_RS15205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CXD88_RS15210 PF01066 CDP-alcohol phosphatidyltransferase CXD88_RS15225 PF00312 Ribosomal protein S15 CXD88_RS15230 PF00013 KH domain CXD88_RS15230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CXD88_RS15230 PF01138 3' exoribonuclease family, domain 1 CXD88_RS15230 PF03725 3' exoribonuclease family, domain 2 CXD88_RS15230 PF00575 S1 RNA binding domain CXD88_RS15245 PF00291 Pyridoxal-phosphate dependent enzyme CXD88_RS15245 PF13291 ACT domain CXD88_RS15260 PF08240 Alcohol dehydrogenase GroES-like domain CXD88_RS15260 PF08990 Erythronolide synthase docking CXD88_RS15260 PF16197 Ketoacyl-synthetase C-terminal extension CXD88_RS15260 PF00109 Beta-ketoacyl synthase, N-terminal domain CXD88_RS15260 PF02801 Beta-ketoacyl synthase, C-terminal domain CXD88_RS15260 PF00550 Phosphopantetheine attachment site CXD88_RS15260 PF08659 KR domain CXD88_RS15260 PF14765 Polyketide synthase dehydratase CXD88_RS15260 PF00698 Acyl transferase domain CXD88_RS15265 PF00121 Triosephosphate isomerase CXD88_RS15270 PF03840 Preprotein translocase SecG subunit CXD88_RS15280 PF02028 BCCT, betaine/carnitine/choline family transporter CXD88_RS15290 PF07476 Methylaspartate ammonia-lyase C-terminus CXD88_RS15290 PF05034 Methylaspartate ammonia-lyase N-terminus CXD88_RS15295 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS15310 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS15325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS15325 PF03466 LysR substrate binding domain CXD88_RS15330 PF01053 Cys/Met metabolism PLP-dependent enzyme CXD88_RS15335 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CXD88_RS15350 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS15355 PF01266 FAD dependent oxidoreductase CXD88_RS15365 PF01968 Hydantoinase/oxoprolinase CXD88_RS15365 PF05378 Hydantoinase/oxoprolinase N-terminal region CXD88_RS15375 PF00127 Copper binding proteins, plastocyanin/azurin family CXD88_RS15385 PF02321 Outer membrane efflux protein CXD88_RS15390 PF00873 AcrB/AcrD/AcrF family CXD88_RS15395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CXD88_RS15400 PF01638 HxlR-like helix-turn-helix CXD88_RS15410 PF02028 BCCT, betaine/carnitine/choline family transporter CXD88_RS15415 PF03466 LysR substrate binding domain CXD88_RS15415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS15420 PF00781 Diacylglycerol kinase catalytic domain CXD88_RS15430 PF01569 PAP2 superfamily CXD88_RS15460 PF13609 Gram-negative porin CXD88_RS15465 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CXD88_RS15470 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CXD88_RS15475 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CXD88_RS15480 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CXD88_RS15490 PF10531 SLBB domain CXD88_RS15490 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CXD88_RS15490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CXD88_RS15495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CXD88_RS15495 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CXD88_RS15495 PF00384 Molybdopterin oxidoreductase CXD88_RS15500 PF00146 NADH dehydrogenase CXD88_RS15505 PF12838 4Fe-4S dicluster domain CXD88_RS15510 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CXD88_RS15515 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CXD88_RS15520 PF00361 Proton-conducting membrane transporter CXD88_RS15520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CXD88_RS15525 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CXD88_RS15525 PF00361 Proton-conducting membrane transporter CXD88_RS15530 PF00361 Proton-conducting membrane transporter CXD88_RS15540 PF00593 TonB dependent receptor CXD88_RS15540 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS15545 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS15545 PF00593 TonB dependent receptor CXD88_RS15560 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS15560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS15560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS15565 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS15570 PF03466 LysR substrate binding domain CXD88_RS15580 PF17757 UvrB interaction domain CXD88_RS15580 PF00271 Helicase conserved C-terminal domain CXD88_RS15580 PF00270 DEAD/DEAH box helicase CXD88_RS15580 PF02559 CarD-like/TRCF domain CXD88_RS15580 PF03461 TRCF domain CXD88_RS15585 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CXD88_RS15590 PF02542 YgbB family CXD88_RS15605 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CXD88_RS15610 PF01433 Peptidase family M1 domain CXD88_RS15610 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CXD88_RS15610 PF11940 Domain of unknown function (DUF3458) Ig-like fold CXD88_RS15630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS15630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS15630 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS15640 PF09084 NMT1/THI5 like CXD88_RS15645 PF00005 ABC transporter CXD88_RS15650 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS15660 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS15660 PF00501 AMP-binding enzyme CXD88_RS15665 PF00107 Zinc-binding dehydrogenase CXD88_RS15665 PF08240 Alcohol dehydrogenase GroES-like domain CXD88_RS15670 PF07729 FCD domain CXD88_RS15670 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS15680 PF07729 FCD domain CXD88_RS15680 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS15685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS15685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS15685 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS15705 PF01063 Amino-transferase class IV CXD88_RS15710 PF00005 ABC transporter CXD88_RS15715 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS15725 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS15730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS15730 PF03466 LysR substrate binding domain CXD88_RS15735 PF02321 Outer membrane efflux protein CXD88_RS15740 PF13533 Biotin-lipoyl like CXD88_RS15745 PF00664 ABC transporter transmembrane region CXD88_RS15745 PF00005 ABC transporter CXD88_RS15745 PF03412 Peptidase C39 family CXD88_RS15750 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CXD88_RS15750 PF03497 Anthrax toxin LF subunit CXD88_RS15750 PF02382 N-terminal domain in RTX protein CXD88_RS15760 PF02794 RTX toxin acyltransferase family CXD88_RS15765 PF00171 Aldehyde dehydrogenase family CXD88_RS15770 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS15780 PF01266 FAD dependent oxidoreductase CXD88_RS15785 PF02538 Hydantoinase B/oxoprolinase CXD88_RS15790 PF01968 Hydantoinase/oxoprolinase CXD88_RS15790 PF05378 Hydantoinase/oxoprolinase N-terminal region CXD88_RS15795 PF03466 LysR substrate binding domain CXD88_RS15795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS15805 PF00348 Polyprenyl synthetase CXD88_RS15815 PF00829 Ribosomal prokaryotic L21 protein CXD88_RS15820 PF01016 Ribosomal L27 protein CXD88_RS15825 PF01018 GTP1/OBG CXD88_RS15825 PF01926 50S ribosome-binding GTPase CXD88_RS15830 PF00696 Amino acid kinase family CXD88_RS15830 PF01472 PUA domain CXD88_RS15875 PF04773 FecR protein CXD88_RS15875 PF16220 Domain of unknown function (DUF4880) CXD88_RS15880 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS15880 PF00593 TonB dependent receptor CXD88_RS15885 PF04264 YceI-like domain CXD88_RS15895 PF16653 Saccharopine dehydrogenase C-terminal domain CXD88_RS15895 PF03435 Saccharopine dehydrogenase NADP binding domain CXD88_RS15900 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CXD88_RS15920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS15925 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS15930 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS15935 PF00005 ABC transporter CXD88_RS15935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS15940 PF01425 Amidase CXD88_RS15945 PF00202 Aminotransferase class-III CXD88_RS15970 PF01329 Pterin 4 alpha carbinolamine dehydratase CXD88_RS15980 PF00483 Nucleotidyl transferase CXD88_RS15985 PF01636 Phosphotransferase enzyme family CXD88_RS15990 PF04453 LPS transport system D CXD88_RS15995 PF00639 PPIC-type PPIASE domain CXD88_RS15995 PF09312 SurA N-terminal domain CXD88_RS16000 PF00398 Ribosomal RNA adenine dimethylase CXD88_RS16005 PF02595 Glycerate kinase family CXD88_RS16010 PF00224 Pyruvate kinase, barrel domain CXD88_RS16010 PF02887 Pyruvate kinase, alpha/beta domain CXD88_RS16015 PF07670 Nucleoside recognition CXD88_RS16040 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS16045 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS16050 PF00005 ABC transporter CXD88_RS16055 PF01032 FecCD transport family CXD88_RS16065 PF00691 OmpA family CXD88_RS16070 PF04052 TolB amino-terminal domain CXD88_RS16070 PF07676 WD40-like Beta Propeller Repeat CXD88_RS16080 PF02472 Biopolymer transport protein ExbD/TolR CXD88_RS16085 PF01618 MotA/TolQ/ExbB proton channel family CXD88_RS16090 PF03061 Thioesterase superfamily CXD88_RS16095 PF03129 Anticodon binding domain CXD88_RS16095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CXD88_RS16095 PF04073 Aminoacyl-tRNA editing domain CXD88_RS16100 PF00293 NUDIX domain CXD88_RS16105 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS16105 PF00072 Response regulator receiver domain CXD88_RS16115 PF02586 SOS response associated peptidase (SRAP) CXD88_RS16190 PF06791 Prophage tail length tape measure protein CXD88_RS16330 PF03180 NLPA lipoprotein CXD88_RS16340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CXD88_RS16340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CXD88_RS16345 PF00005 ABC transporter CXD88_RS16350 PF00005 ABC transporter CXD88_RS16350 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS16355 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS16360 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS16365 PF13458 Periplasmic binding protein CXD88_RS16370 PF01425 Amidase CXD88_RS16375 PF00484 Carbonic anhydrase CXD88_RS16390 PF00270 DEAD/DEAH box helicase CXD88_RS16390 PF09382 RQC domain CXD88_RS16390 PF16124 RecQ zinc-binding CXD88_RS16390 PF00570 HRDC domain CXD88_RS16390 PF00271 Helicase conserved C-terminal domain CXD88_RS16395 PF17864 RuvB AAA lid domain CXD88_RS16395 PF05496 Holliday junction DNA helicase RuvB P-loop domain CXD88_RS16395 PF05491 RuvB C-terminal winged helix domain CXD88_RS16400 PF00291 Pyridoxal-phosphate dependent enzyme CXD88_RS16405 PF01370 NAD dependent epimerase/dehydratase family CXD88_RS16410 PF07499 RuvA, C-terminal domain CXD88_RS16410 PF01330 RuvA N terminal domain CXD88_RS16415 PF02075 Crossover junction endodeoxyribonuclease RuvC CXD88_RS16420 PF02142 MGS-like domain CXD88_RS16420 PF01808 AICARFT/IMPCHase bienzyme CXD88_RS16425 PF02954 Bacterial regulatory protein, Fis family CXD88_RS16430 PF01207 Dihydrouridine synthase (Dus) CXD88_RS16435 PF01494 FAD binding domain CXD88_RS16445 PF00557 Metallopeptidase family M24 CXD88_RS16445 PF05195 Aminopeptidase P, N-terminal domain CXD88_RS16470 PF13609 Gram-negative porin CXD88_RS16480 PF00483 Nucleotidyl transferase CXD88_RS16485 PF01435 Peptidase family M48 CXD88_RS16485 PF13181 Tetratricopeptide repeat CXD88_RS16490 PF00561 alpha/beta hydrolase fold CXD88_RS16505 PF01063 Amino-transferase class IV CXD88_RS16520 PF00270 DEAD/DEAH box helicase CXD88_RS16520 PF00271 Helicase conserved C-terminal domain CXD88_RS16540 PF02464 Competence-damaged protein CXD88_RS16540 PF18146 Damage-inducible protein CinA KH domain CXD88_RS16540 PF00994 Probable molybdopterin binding domain CXD88_RS16545 PF01614 Bacterial transcriptional regulator CXD88_RS16545 PF09339 IclR helix-turn-helix domain CXD88_RS16550 PF05785 Rho-activating domain of cytotoxic necrotizing factor CXD88_RS16550 PF18807 Tripartite Tc toxins repeat CXD88_RS16555 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS16565 PF01180 Dihydroorotate dehydrogenase CXD88_RS16570 PF04376 Arginine-tRNA-protein transferase, N terminus CXD88_RS16570 PF04377 Arginine-tRNA-protein transferase, C terminus CXD88_RS16585 PF03466 LysR substrate binding domain CXD88_RS16585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS16625 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS16625 PF07729 FCD domain CXD88_RS16630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS16630 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS16630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS16635 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS16640 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CXD88_RS16645 PF03949 Malic enzyme, NAD binding domain CXD88_RS16645 PF00390 Malic enzyme, N-terminal domain CXD88_RS16645 PF01515 Phosphate acetyl/butaryl transferase CXD88_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS16665 PF00005 ABC transporter CXD88_RS16665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS16680 PF03466 LysR substrate binding domain CXD88_RS16695 PF01022 Bacterial regulatory protein, arsR family CXD88_RS16710 PF03594 Benzoate membrane transport protein CXD88_RS16715 PF00037 4Fe-4S binding domain CXD88_RS16720 PF01467 Cytidylyltransferase-like CXD88_RS16730 PF00448 SRP54-type protein, GTPase domain CXD88_RS16730 PF02881 SRP54-type protein, helical bundle domain CXD88_RS16740 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS16745 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS16780 PF00925 GTP cyclohydrolase II CXD88_RS16780 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CXD88_RS16785 PF00885 6,7-dimethyl-8-ribityllumazine synthase CXD88_RS16790 PF01029 NusB family CXD88_RS16795 PF02769 AIR synthase related protein, C-terminal domain CXD88_RS16795 PF00586 AIR synthase related protein, N-terminal domain CXD88_RS16800 PF04608 Phosphatidylglycerophosphatase A CXD88_RS16805 PF18146 Damage-inducible protein CinA KH domain CXD88_RS16805 PF00994 Probable molybdopterin binding domain CXD88_RS16805 PF02464 Competence-damaged protein CXD88_RS16810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CXD88_RS16815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS16820 PF01219 Prokaryotic diacylglycerol kinase CXD88_RS16825 PF03631 Virulence factor BrkB CXD88_RS16830 PF03797 Autotransporter beta-domain CXD88_RS16830 PF03212 Pertactin CXD88_RS16835 PF00118 TCP-1/cpn60 chaperonin family CXD88_RS16840 PF00166 Chaperonin 10 Kd subunit CXD88_RS16860 PF00890 FAD binding domain CXD88_RS16875 PF03466 LysR substrate binding domain CXD88_RS16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS16880 PF00890 FAD binding domain CXD88_RS16905 PF00990 Diguanylate cyclase, GGDEF domain CXD88_RS16910 PF00072 Response regulator receiver domain CXD88_RS16945 PF10017 Histidine-specific methyltransferase, SAM-dependent CXD88_RS16955 PF13396 Phospholipase_D-nuclease N-terminal CXD88_RS16955 PF13091 PLD-like domain CXD88_RS16965 PF01645 Conserved region in glutamate synthase CXD88_RS16970 PF04143 Sulphur transport CXD88_RS16975 PF03547 Membrane transport protein CXD88_RS16980 PF13673 Acetyltransferase (GNAT) domain CXD88_RS17000 PF08461 Ribonuclease R winged-helix domain CXD88_RS17000 PF00773 RNB domain CXD88_RS17000 PF00575 S1 RNA binding domain CXD88_RS17000 PF17876 Cold shock domain CXD88_RS17000 PF08206 Ribonuclease B OB domain CXD88_RS17005 PF08032 RNA 2'-O ribose methyltransferase substrate binding CXD88_RS17005 PF00588 SpoU rRNA Methylase family CXD88_RS17010 PF01053 Cys/Met metabolism PLP-dependent enzyme CXD88_RS17015 PF13640 2OG-Fe(II) oxygenase superfamily CXD88_RS17015 PF18331 PKHD-type hydroxylase C-terminal domain CXD88_RS17020 PF00216 Bacterial DNA-binding protein CXD88_RS17035 PF01618 MotA/TolQ/ExbB proton channel family CXD88_RS17040 PF02472 Biopolymer transport protein ExbD/TolR CXD88_RS17045 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS17045 PF00072 Response regulator receiver domain CXD88_RS17050 PF08521 Two-component sensor kinase N-terminal CXD88_RS17050 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS17055 PF02705 K+ potassium transporter CXD88_RS17060 PF00764 Arginosuccinate synthase CXD88_RS17065 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CXD88_RS17065 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CXD88_RS17070 PF00202 Aminotransferase class-III CXD88_RS17080 PF03466 LysR substrate binding domain CXD88_RS17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS17090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CXD88_RS17090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CXD88_RS17095 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS17110 PF07729 FCD domain CXD88_RS17110 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS17120 PF07690 Major Facilitator Superfamily CXD88_RS17130 PF02627 Carboxymuconolactone decarboxylase family CXD88_RS17135 PF00578 AhpC/TSA family CXD88_RS17140 PF00672 HAMP domain CXD88_RS17140 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS17140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS17150 PF00072 Response regulator receiver domain CXD88_RS17150 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS17155 PF00814 Glycoprotease family CXD88_RS17160 PF03167 Uracil DNA glycosylase superfamily CXD88_RS17165 PF07690 Major Facilitator Superfamily CXD88_RS17170 PF06470 SMC proteins Flexible Hinge Domain CXD88_RS17170 PF02463 RecF/RecN/SMC N terminal domain CXD88_RS17180 PF00533 BRCA1 C Terminus (BRCT) domain CXD88_RS17180 PF01653 NAD-dependent DNA ligase adenylation domain CXD88_RS17180 PF12826 Helix-hairpin-helix motif CXD88_RS17180 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CXD88_RS17180 PF03120 NAD-dependent DNA ligase OB-fold domain CXD88_RS17195 PF04279 Intracellular septation protein A CXD88_RS17200 PF01641 SelR domain CXD88_RS17205 PF00005 ABC transporter CXD88_RS17210 PF02361 Cobalt transport protein CXD88_RS17215 PF02632 BioY family CXD88_RS17230 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS17230 PF00005 ABC transporter CXD88_RS17235 PF01063 Amino-transferase class IV CXD88_RS17250 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS17260 PF00005 ABC transporter CXD88_RS17265 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS17265 PF00005 ABC transporter CXD88_RS17270 PF00730 HhH-GPD superfamily base excision DNA repair protein CXD88_RS17270 PF10576 Iron-sulfur binding domain of endonuclease III CXD88_RS17270 PF00633 Helix-hairpin-helix motif CXD88_RS17275 PF04060 Putative Fe-S cluster CXD88_RS17285 PF00970 Oxidoreductase FAD-binding domain CXD88_RS17285 PF00175 Oxidoreductase NAD-binding domain CXD88_RS17290 PF00037 4Fe-4S binding domain CXD88_RS17290 PF11953 Domain of unknown function (DUF3470) CXD88_RS17295 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CXD88_RS17295 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CXD88_RS17300 PF01042 Endoribonuclease L-PSP CXD88_RS17310 PF06167 Glucose-regulated metallo-peptidase M90 CXD88_RS17315 PF04607 Region found in RelA / SpoT proteins CXD88_RS17315 PF13291 ACT domain CXD88_RS17315 PF02824 TGS domain CXD88_RS17320 PF07687 Peptidase dimerisation domain CXD88_RS17320 PF01546 Peptidase family M20/M25/M40 CXD88_RS17325 PF00291 Pyridoxal-phosphate dependent enzyme CXD88_RS17330 PF00290 Tryptophan synthase alpha chain CXD88_RS17335 PF17848 Acetyl-coA carboxylase zinc finger domain CXD88_RS17335 PF01039 Carboxyl transferase domain CXD88_RS17355 PF10150 Ribonuclease E/G family CXD88_RS17355 PF00575 S1 RNA binding domain CXD88_RS17355 PF12111 Polyribonucleotide phosphorylase C terminal CXD88_RS17360 PF01479 S4 domain CXD88_RS17360 PF00849 RNA pseudouridylate synthase CXD88_RS17365 PF13419 Haloacid dehalogenase-like hydrolase CXD88_RS17370 PF00174 Oxidoreductase molybdopterin binding domain CXD88_RS17375 PF01794 Ferric reductase like transmembrane component CXD88_RS17390 PF02515 CoA-transferase family III CXD88_RS17395 PF03466 LysR substrate binding domain CXD88_RS17395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS17405 PF02515 CoA-transferase family III CXD88_RS17420 PF03466 LysR substrate binding domain CXD88_RS17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS17425 PF01042 Endoribonuclease L-PSP CXD88_RS17430 PF00970 Oxidoreductase FAD-binding domain CXD88_RS17430 PF00175 Oxidoreductase NAD-binding domain CXD88_RS17430 PF00042 Globin CXD88_RS17435 PF02667 Short chain fatty acid transporter CXD88_RS17440 PF00171 Aldehyde dehydrogenase family CXD88_RS17445 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS17445 PF07729 FCD domain CXD88_RS17455 PF00313 'Cold-shock' DNA-binding domain CXD88_RS17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS17460 PF03466 LysR substrate binding domain CXD88_RS17485 PF02803 Thiolase, C-terminal domain CXD88_RS17485 PF00108 Thiolase, N-terminal domain CXD88_RS17495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS17495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS17495 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS17500 PF03466 LysR substrate binding domain CXD88_RS17505 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS17510 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS17515 PF02515 CoA-transferase family III CXD88_RS17520 PF03471 Transporter associated domain CXD88_RS17520 PF03741 Integral membrane protein TerC family CXD88_RS17525 PF02308 MgtC family CXD88_RS17535 PF00155 Aminotransferase class I and II CXD88_RS17535 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS17545 PF00582 Universal stress protein family CXD88_RS17550 PF00009 Elongation factor Tu GTP binding domain CXD88_RS17550 PF03144 Elongation factor Tu domain 2 CXD88_RS17550 PF00679 Elongation factor G C-terminus CXD88_RS17550 PF03764 Elongation factor G, domain IV CXD88_RS17550 PF14492 Elongation Factor G, domain II CXD88_RS17565 PF00701 Dihydrodipicolinate synthetase family CXD88_RS17570 PF03466 LysR substrate binding domain CXD88_RS17570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS17575 PF02515 CoA-transferase family III CXD88_RS17580 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS17585 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS17585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS17585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS17590 PF01575 MaoC like domain CXD88_RS17605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CXD88_RS17605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CXD88_RS17610 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS17615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS17615 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS17615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS17620 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS17625 PF13607 Succinyl-CoA ligase like flavodoxin domain CXD88_RS17625 PF13380 CoA binding domain CXD88_RS17635 PF00676 Dehydrogenase E1 component CXD88_RS17640 PF02780 Transketolase, C-terminal domain CXD88_RS17640 PF02779 Transketolase, pyrimidine binding domain CXD88_RS17645 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS17650 PF02817 e3 binding domain CXD88_RS17650 PF00364 Biotin-requiring enzyme CXD88_RS17650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CXD88_RS17655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CXD88_RS17655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CXD88_RS17655 PF02770 Acyl-CoA dehydrogenase, middle domain CXD88_RS17660 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS17660 PF00501 AMP-binding enzyme CXD88_RS17670 PF13458 Periplasmic binding protein CXD88_RS17675 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS17680 PF00005 ABC transporter CXD88_RS17680 PF12399 Branched-chain amino acid ATP-binding cassette transporter CXD88_RS17685 PF00005 ABC transporter CXD88_RS17690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CXD88_RS17690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS17705 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS17720 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS17735 PF00899 ThiF family CXD88_RS17740 PF03572 Peptidase family S41 CXD88_RS17740 PF13180 PDZ domain CXD88_RS17745 PF01551 Peptidase family M23 CXD88_RS17750 PF00300 Histidine phosphatase superfamily (branch 1) CXD88_RS17755 PF00581 Rhodanese-like domain CXD88_RS17755 PF12368 Rhodanase C-terminal CXD88_RS17755 PF17773 UPF0176 acylphosphatase like domain CXD88_RS17760 PF00462 Glutaredoxin CXD88_RS17765 PF02556 Preprotein translocase subunit SecB CXD88_RS17770 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CXD88_RS17770 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CXD88_RS17775 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS17780 PF00588 SpoU rRNA Methylase family CXD88_RS17790 PF08241 Methyltransferase domain CXD88_RS17795 PF04107 Glutamate-cysteine ligase family 2(GCS2) CXD88_RS17800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CXD88_RS17810 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS17815 PF00005 ABC transporter CXD88_RS17825 PF00111 2Fe-2S iron-sulfur cluster binding domain CXD88_RS17825 PF01799 [2Fe-2S] binding domain CXD88_RS17830 PF03450 CO dehydrogenase flavoprotein C-terminal domain CXD88_RS17830 PF00941 FAD binding domain in molybdopterin dehydrogenase CXD88_RS17835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CXD88_RS17835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CXD88_RS17840 PF03480 Bacterial extracellular solute-binding protein, family 7 CXD88_RS17845 PF00355 Rieske [2Fe-2S] domain CXD88_RS17850 PF14759 Reductase C-terminal CXD88_RS17850 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS17855 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CXD88_RS17855 PF00355 Rieske [2Fe-2S] domain CXD88_RS17865 PF00857 Isochorismatase family CXD88_RS17880 PF17645 Arylmalonate decarboxylase CXD88_RS17890 PF12804 MobA-like NTP transferase domain CXD88_RS17900 PF01047 MarR family CXD88_RS17905 PF02386 Cation transport protein CXD88_RS17910 PF02254 TrkA-N domain CXD88_RS17910 PF02080 TrkA-C domain CXD88_RS17915 PF02954 Bacterial regulatory protein, Fis family CXD88_RS17915 PF00072 Response regulator receiver domain CXD88_RS17915 PF00158 Sigma-54 interaction domain CXD88_RS17920 PF00672 HAMP domain CXD88_RS17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS17920 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS17920 PF00989 PAS fold CXD88_RS17930 PF01029 NusB family CXD88_RS17930 PF01189 16S rRNA methyltransferase RsmB/F CXD88_RS17940 PF03447 Homoserine dehydrogenase, NAD binding domain CXD88_RS17940 PF01958 Domain of unknown function DUF108 CXD88_RS17970 PF01810 LysE type translocator CXD88_RS17975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS17975 PF03466 LysR substrate binding domain CXD88_RS17985 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS17995 PF00155 Aminotransferase class I and II CXD88_RS18000 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS18010 PF00682 HMGL-like CXD88_RS18015 PF02481 DNA recombination-mediator protein A CXD88_RS18015 PF17782 DprA winged helix domain CXD88_RS18020 PF01037 Lrp/AsnC ligand binding domain CXD88_RS18025 PF00266 Aminotransferase class-V CXD88_RS18030 PF01327 Polypeptide deformylase CXD88_RS18045 PF00551 Formyl transferase CXD88_RS18045 PF02911 Formyl transferase, C-terminal domain CXD88_RS18055 PF13419 Haloacid dehalogenase-like hydrolase CXD88_RS18065 PF03641 Possible lysine decarboxylase CXD88_RS18075 PF04055 Radical SAM superfamily CXD88_RS18075 PF00919 Uncharacterized protein family UPF0004 CXD88_RS18075 PF18693 TRAM domain CXD88_RS18080 PF01361 Tautomerase enzyme CXD88_RS18085 PF01266 FAD dependent oxidoreductase CXD88_RS18090 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS18095 PF07729 FCD domain CXD88_RS18095 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS18110 PF00202 Aminotransferase class-III CXD88_RS18115 PF00491 Arginase family CXD88_RS18125 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS18130 PF02627 Carboxymuconolactone decarboxylase family CXD88_RS18135 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS18140 PF09339 IclR helix-turn-helix domain CXD88_RS18140 PF01614 Bacterial transcriptional regulator CXD88_RS18145 PF00501 AMP-binding enzyme CXD88_RS18145 PF13193 AMP-binding enzyme C-terminal domain CXD88_RS18150 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS18160 PF12951 Passenger-associated-transport-repeat CXD88_RS18160 PF12951 Passenger-associated-transport-repeat CXD88_RS18190 PF14031 Putative serine dehydratase domain CXD88_RS18190 PF01168 Alanine racemase, N-terminal domain CXD88_RS18195 PF07411 Domain of unknown function (DUF1508) CXD88_RS18200 PF01145 SPFH domain / Band 7 family CXD88_RS18210 PF01042 Endoribonuclease L-PSP CXD88_RS18260 PF03837 RecT family CXD88_RS18295 PF00589 Phage integrase family CXD88_RS18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS18315 PF03466 LysR substrate binding domain CXD88_RS18330 PF02096 60Kd inner membrane protein CXD88_RS18330 PF14849 YidC periplasmic domain CXD88_RS18335 PF01809 Putative membrane protein insertion efficiency factor CXD88_RS18340 PF00825 Ribonuclease P CXD88_RS18345 PF00468 Ribosomal protein L34 CXD88_RS18350 PF00308 Bacterial dnaA protein CXD88_RS18350 PF11638 DnaA N-terminal domain CXD88_RS18350 PF08299 Bacterial dnaA protein helix-turn-helix CXD88_RS18355 PF02767 DNA polymerase III beta subunit, central domain CXD88_RS18355 PF00712 DNA polymerase III beta subunit, N-terminal domain CXD88_RS18355 PF02768 DNA polymerase III beta subunit, C-terminal domain CXD88_RS18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS18360 PF00986 DNA gyrase B subunit, carboxyl terminus CXD88_RS18360 PF00204 DNA gyrase B CXD88_RS18360 PF01751 Toprim domain CXD88_RS18360 PF18053 DNA gyrase B subunit insert domain CXD88_RS18365 PF09339 IclR helix-turn-helix domain CXD88_RS18365 PF01614 Bacterial transcriptional regulator CXD88_RS18370 PF01425 Amidase CXD88_RS18375 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS18385 PF01070 FMN-dependent dehydrogenase CXD88_RS18410 PF00376 MerR family regulatory protein CXD88_RS18410 PF09278 MerR, DNA binding CXD88_RS18435 PF02803 Thiolase, C-terminal domain CXD88_RS18435 PF00108 Thiolase, N-terminal domain CXD88_RS18440 PF01039 Carboxyl transferase domain CXD88_RS18445 PF00289 Biotin carboxylase, N-terminal domain CXD88_RS18445 PF02785 Biotin carboxylase C-terminal domain CXD88_RS18445 PF00364 Biotin-requiring enzyme CXD88_RS18445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CXD88_RS18455 PF00202 Aminotransferase class-III CXD88_RS18460 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS18465 PF01168 Alanine racemase, N-terminal domain CXD88_RS18465 PF14031 Putative serine dehydratase domain CXD88_RS18470 PF16868 NMT1-like family CXD88_RS18480 PF00593 TonB dependent receptor CXD88_RS18480 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS18485 PF04361 Protein of unknown function (DUF494) CXD88_RS18500 PF01131 DNA topoisomerase CXD88_RS18500 PF01751 Toprim domain CXD88_RS18510 PF00005 ABC transporter CXD88_RS18515 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS18525 PF00171 Aldehyde dehydrogenase family CXD88_RS18535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CXD88_RS18535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CXD88_RS18535 PF00205 Thiamine pyrophosphate enzyme, central domain CXD88_RS18540 PF01037 Lrp/AsnC ligand binding domain CXD88_RS18545 PF01062 Bestrophin, RFP-TM, chloride channel CXD88_RS18555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CXD88_RS18570 PF02310 B12 binding domain CXD88_RS18570 PF02607 B12 binding domain CXD88_RS18570 PF02965 Vitamin B12 dependent methionine synthase, activation domain CXD88_RS18570 PF02574 Homocysteine S-methyltransferase CXD88_RS18570 PF00809 Pterin binding enzyme CXD88_RS18575 PF00593 TonB dependent receptor CXD88_RS18575 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS18580 PF01497 Periplasmic binding protein CXD88_RS18585 PF05690 Thiazole biosynthesis protein ThiG CXD88_RS18590 PF08543 Phosphomethylpyrimidine kinase CXD88_RS18605 PF02321 Outer membrane efflux protein CXD88_RS18610 PF01467 Cytidylyltransferase-like CXD88_RS18620 PF01594 AI-2E family transporter CXD88_RS18630 PF07885 Ion channel CXD88_RS18630 PF02254 TrkA-N domain CXD88_RS18645 PF00164 Ribosomal protein S12/S23 CXD88_RS18650 PF00177 Ribosomal protein S7p/S5e CXD88_RS18655 PF03144 Elongation factor Tu domain 2 CXD88_RS18655 PF00679 Elongation factor G C-terminus CXD88_RS18655 PF14492 Elongation Factor G, domain II CXD88_RS18655 PF03764 Elongation factor G, domain IV CXD88_RS18655 PF00009 Elongation factor Tu GTP binding domain CXD88_RS18660 PF00009 Elongation factor Tu GTP binding domain CXD88_RS18660 PF03144 Elongation factor Tu domain 2 CXD88_RS18660 PF03143 Elongation factor Tu C-terminal domain CXD88_RS18665 PF00338 Ribosomal protein S10p/S20e CXD88_RS18670 PF00297 Ribosomal protein L3 CXD88_RS18675 PF00573 Ribosomal protein L4/L1 family CXD88_RS18680 PF00276 Ribosomal protein L23 CXD88_RS18685 PF03947 Ribosomal Proteins L2, C-terminal domain CXD88_RS18685 PF00181 Ribosomal Proteins L2, RNA binding domain CXD88_RS18690 PF00203 Ribosomal protein S19 CXD88_RS18695 PF00237 Ribosomal protein L22p/L17e CXD88_RS18700 PF00189 Ribosomal protein S3, C-terminal domain CXD88_RS18700 PF07650 KH domain CXD88_RS18705 PF00252 Ribosomal protein L16p/L10e CXD88_RS18710 PF00831 Ribosomal L29 protein CXD88_RS18715 PF00366 Ribosomal protein S17 CXD88_RS18725 PF00171 Aldehyde dehydrogenase family CXD88_RS18735 PF00238 Ribosomal protein L14p/L23e CXD88_RS18740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CXD88_RS18745 PF00281 Ribosomal protein L5 CXD88_RS18745 PF00673 ribosomal L5P family C-terminus CXD88_RS18750 PF00253 Ribosomal protein S14p/S29e CXD88_RS18755 PF00410 Ribosomal protein S8 CXD88_RS18760 PF00347 Ribosomal protein L6 CXD88_RS18765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CXD88_RS18770 PF03719 Ribosomal protein S5, C-terminal domain CXD88_RS18770 PF00333 Ribosomal protein S5, N-terminal domain CXD88_RS18775 PF00327 Ribosomal protein L30p/L7e CXD88_RS18780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CXD88_RS18785 PF00344 SecY translocase CXD88_RS18790 PF01176 Translation initiation factor 1A / IF-1 CXD88_RS18795 PF00444 Ribosomal protein L36 CXD88_RS18800 PF00416 Ribosomal protein S13/S18 CXD88_RS18805 PF00411 Ribosomal protein S11 CXD88_RS18810 PF01479 S4 domain CXD88_RS18810 PF00163 Ribosomal protein S4/S9 N-terminal domain CXD88_RS18815 PF01000 RNA polymerase Rpb3/RpoA insert domain CXD88_RS18815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CXD88_RS18815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CXD88_RS18820 PF01196 Ribosomal protein L17 CXD88_RS18825 PF01230 HIT domain CXD88_RS18830 PF03091 CutA1 divalent ion tolerance protein CXD88_RS18835 PF02683 Cytochrome C biogenesis protein transmembrane region CXD88_RS18835 PF11412 Disulphide bond corrector protein DsbC CXD88_RS18840 PF00892 EamA-like transporter family CXD88_RS18845 PF00490 Delta-aminolevulinic acid dehydratase CXD88_RS18850 PF01926 50S ribosome-binding GTPase CXD88_RS18855 PF00034 Cytochrome c CXD88_RS18860 PF05140 ResB-like family CXD88_RS18865 PF01578 Cytochrome C assembly protein CXD88_RS18870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CXD88_RS18870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CXD88_RS18875 PF13627 Prokaryotic lipoprotein-attachment site CXD88_RS18880 PF01491 Frataxin-like domain CXD88_RS18885 PF17092 Penicillin-binding protein OB-like domain CXD88_RS18885 PF00905 Penicillin binding protein transpeptidase domain CXD88_RS18885 PF00912 Transglycosylase CXD88_RS18890 PF01202 Shikimate kinase CXD88_RS18895 PF01761 3-dehydroquinate synthase CXD88_RS18900 PF01966 HD domain CXD88_RS18900 PF13286 Phosphohydrolase-associated domain CXD88_RS18905 PF00043 Glutathione S-transferase, C-terminal domain CXD88_RS18905 PF13417 Glutathione S-transferase, N-terminal domain CXD88_RS18910 PF17760 UvrA interaction domain CXD88_RS18910 PF17755 UvrA DNA-binding domain CXD88_RS18915 PF07690 Major Facilitator Superfamily CXD88_RS18920 PF00436 Single-strand binding protein family CXD88_RS18925 PF00593 TonB dependent receptor CXD88_RS18925 PF07715 TonB-dependent Receptor Plug Domain CXD88_RS18935 PF03328 HpcH/HpaI aldolase/citrate lyase family CXD88_RS18945 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS18955 PF03466 LysR substrate binding domain CXD88_RS18960 PF01979 Amidohydrolase family CXD88_RS18965 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS18970 PF13439 Glycosyltransferase Family 4 CXD88_RS18970 PF00534 Glycosyl transferases group 1 CXD88_RS18980 PF03466 LysR substrate binding domain CXD88_RS18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS18990 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS18995 PF00005 ABC transporter CXD88_RS19015 PF01274 Malate synthase CXD88_RS19035 PF01040 UbiA prenyltransferase family CXD88_RS19040 PF00155 Aminotransferase class I and II CXD88_RS19045 PF13185 GAF domain CXD88_RS19050 PF00701 Dihydrodipicolinate synthetase family CXD88_RS19065 PF01476 LysM domain CXD88_RS19065 PF04972 BON domain CXD88_RS19070 PF05690 Thiazole biosynthesis protein ThiG CXD88_RS19070 PF02597 ThiS family CXD88_RS19075 PF00561 alpha/beta hydrolase fold CXD88_RS19080 PF02390 Putative methyltransferase CXD88_RS19095 PF00682 HMGL-like CXD88_RS19100 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS19120 PF07702 UTRA domain CXD88_RS19120 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS19125 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS19135 PF00392 Bacterial regulatory proteins, gntR family CXD88_RS19135 PF07702 UTRA domain CXD88_RS19140 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS19150 PF00005 ABC transporter CXD88_RS19155 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS19160 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS19165 PF16197 Ketoacyl-synthetase C-terminal extension CXD88_RS19165 PF02801 Beta-ketoacyl synthase, C-terminal domain CXD88_RS19165 PF08990 Erythronolide synthase docking CXD88_RS19165 PF08659 KR domain CXD88_RS19165 PF00109 Beta-ketoacyl synthase, N-terminal domain CXD88_RS19165 PF00698 Acyl transferase domain CXD88_RS19165 PF08240 Alcohol dehydrogenase GroES-like domain CXD88_RS19165 PF14765 Polyketide synthase dehydratase CXD88_RS19165 PF00550 Phosphopantetheine attachment site CXD88_RS19170 PF02515 CoA-transferase family III CXD88_RS19175 PF00440 Bacterial regulatory proteins, tetR family CXD88_RS19180 PF00293 NUDIX domain CXD88_RS19180 PF09297 NADH pyrophosphatase zinc ribbon domain CXD88_RS19185 PF00970 Oxidoreductase FAD-binding domain CXD88_RS19185 PF00111 2Fe-2S iron-sulfur cluster binding domain CXD88_RS19185 PF00175 Oxidoreductase NAD-binding domain CXD88_RS19190 PF01425 Amidase CXD88_RS19200 PF03466 LysR substrate binding domain CXD88_RS19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CXD88_RS19205 PF13458 Periplasmic binding protein CXD88_RS19215 PF00005 ABC transporter CXD88_RS19225 PF02653 Branched-chain amino acid transport system / permease component CXD88_RS19235 PF00355 Rieske [2Fe-2S] domain CXD88_RS19250 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CXD88_RS19250 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CXD88_RS19265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CXD88_RS19265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CXD88_RS19265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CXD88_RS19270 PF07690 Major Facilitator Superfamily CXD88_RS19275 PF12804 MobA-like NTP transferase domain CXD88_RS19275 PF14602 Hexapeptide repeat of succinyl-transferase CXD88_RS19275 PF00132 Bacterial transferase hexapeptide (six repeats) CXD88_RS19295 PF02630 SCO1/SenC CXD88_RS19300 PF01040 UbiA prenyltransferase family CXD88_RS19305 PF02628 Cytochrome oxidase assembly protein CXD88_RS19325 PF00510 Cytochrome c oxidase subunit III CXD88_RS19340 PF00115 Cytochrome C and Quinol oxidase polypeptide I CXD88_RS19345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CXD88_RS19345 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CXD88_RS19355 PF00999 Sodium/hydrogen exchanger family CXD88_RS19360 PF00149 Calcineurin-like phosphoesterase CXD88_RS19365 PF04545 Sigma-70, region 4 CXD88_RS19365 PF04542 Sigma-70 region 2 CXD88_RS19365 PF00140 Sigma-70 factor, region 1.2 CXD88_RS19375 PF00756 Putative esterase CXD88_RS19380 PF08240 Alcohol dehydrogenase GroES-like domain CXD88_RS19380 PF00107 Zinc-binding dehydrogenase CXD88_RS19390 PF04898 Glutamate synthase central domain CXD88_RS19390 PF00310 Glutamine amidotransferases class-II CXD88_RS19390 PF01645 Conserved region in glutamate synthase CXD88_RS19390 PF01493 GXGXG motif CXD88_RS19395 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CXD88_RS19395 PF07992 Pyridine nucleotide-disulphide oxidoreductase CXD88_RS19400 PF03922 OmpW family CXD88_RS19405 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS19410 PF00005 ABC transporter CXD88_RS19415 PF02405 Permease MlaE CXD88_RS19420 PF02470 MlaD protein CXD88_RS19425 PF04333 MlaA lipoprotein CXD88_RS19440 PF01061 ABC-2 type transporter CXD88_RS19450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CXD88_RS19455 PF01634 ATP phosphoribosyltransferase CXD88_RS19460 PF00815 Histidinol dehydrogenase CXD88_RS19465 PF00155 Aminotransferase class I and II CXD88_RS19470 PF00475 Imidazoleglycerol-phosphate dehydratase CXD88_RS19475 PF00117 Glutamine amidotransferase class-I CXD88_RS19480 PF00977 Histidine biosynthesis protein CXD88_RS19485 PF00977 Histidine biosynthesis protein CXD88_RS19490 PF01502 Phosphoribosyl-AMP cyclohydrolase CXD88_RS19495 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CXD88_RS19500 PF01230 HIT domain CXD88_RS19505 PF02416 mttA/Hcf106 family CXD88_RS19510 PF02416 mttA/Hcf106 family CXD88_RS19515 PF00902 Sec-independent protein translocase protein (TatC) CXD88_RS19525 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS19530 PF02917 Pertussis toxin, subunit 1 CXD88_RS19535 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain CXD88_RS19535 PF03440 Aerolysin/Pertussis toxin (APT) domain CXD88_RS19540 PF09275 Pertussis toxin S4 subunit CXD88_RS19545 PF09276 Pertussis toxin S5 subunit CXD88_RS19550 PF03440 Aerolysin/Pertussis toxin (APT) domain CXD88_RS19550 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain CXD88_RS19555 PF04956 TrbC/VIRB2 family CXD88_RS19560 PF05101 Type IV secretory pathway, VirB3-like protein CXD88_RS19565 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CXD88_RS19570 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CXD88_RS19580 PF04335 VirB8 protein CXD88_RS19585 PF03524 Conjugal transfer protein CXD88_RS19590 PF03743 Bacterial conjugation TrbI-like protein CXD88_RS19595 PF00437 Type II/IV secretion system protein CXD88_RS19605 PF00892 EamA-like transporter family CXD88_RS19625 PF10396 GTP-binding protein TrmE N-terminus CXD88_RS19625 PF01926 50S ribosome-binding GTPase CXD88_RS19625 PF12631 MnmE helical domain CXD88_RS19630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS19635 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS19640 PF12911 N-terminal TM domain of oligopeptide transport permease C CXD88_RS19640 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS19655 PF01960 ArgJ family CXD88_RS19665 PF00293 NUDIX domain CXD88_RS19690 PF02321 Outer membrane efflux protein CXD88_RS19695 PF00873 AcrB/AcrD/AcrF family CXD88_RS19700 PF00873 AcrB/AcrD/AcrF family CXD88_RS19705 PF13533 Biotin-lipoyl like CXD88_RS19710 PF07072 Cell division protein CXD88_RS19715 PF01121 Dephospho-CoA kinase CXD88_RS19720 PF01478 Type IV leader peptidase family CXD88_RS19720 PF06750 Bacterial Peptidase A24 N-terminal domain CXD88_RS19735 PF02569 Pantoate-beta-alanine ligase CXD88_RS19740 PF02616 Segregation and condensation protein ScpA CXD88_RS19750 PF07690 Major Facilitator Superfamily CXD88_RS19755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CXD88_RS19755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CXD88_RS19765 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS19770 PF00005 ABC transporter CXD88_RS19775 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS19780 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS19785 PF00497 Bacterial extracellular solute-binding proteins, family 3 CXD88_RS19790 PF00005 ABC transporter CXD88_RS19795 PF18075 FtsX extracellular domain CXD88_RS19800 PF03975 CheD chemotactic sensory transduction CXD88_RS19810 PF00730 HhH-GPD superfamily base excision DNA repair protein CXD88_RS19810 PF00633 Helix-hairpin-helix motif CXD88_RS19810 PF14815 NUDIX domain CXD88_RS19810 PF10576 Iron-sulfur binding domain of endonuclease III CXD88_RS19820 PF08241 Methyltransferase domain CXD88_RS19830 PF02515 CoA-transferase family III CXD88_RS19835 PF02515 CoA-transferase family III CXD88_RS19845 PF03401 Tripartite tricarboxylate transporter family receptor CXD88_RS19850 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS19855 PF00881 Nitroreductase family CXD88_RS19865 PF00682 HMGL-like CXD88_RS19870 PF00378 Enoyl-CoA hydratase/isomerase CXD88_RS19875 PF02515 CoA-transferase family III CXD88_RS19890 PF00199 Catalase CXD88_RS19890 PF06628 Catalase-related immune-responsive CXD88_RS19895 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS19900 PF00005 ABC transporter CXD88_RS19910 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CXD88_RS19915 PF01546 Peptidase family M20/M25/M40 CXD88_RS19915 PF07687 Peptidase dimerisation domain CXD88_RS19920 PF00005 ABC transporter CXD88_RS19920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS19925 PF00005 ABC transporter CXD88_RS19925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CXD88_RS19930 PF12911 N-terminal TM domain of oligopeptide transport permease C CXD88_RS19930 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS19935 PF00528 Binding-protein-dependent transport system inner membrane component CXD88_RS19940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CXD88_RS19945 PF01926 50S ribosome-binding GTPase CXD88_RS19945 PF12631 MnmE helical domain CXD88_RS19945 PF10396 GTP-binding protein TrmE N-terminus CXD88_RS19955 PF00072 Response regulator receiver domain CXD88_RS19955 PF00486 Transcriptional regulatory protein, C terminal CXD88_RS19960 PF00512 His Kinase A (phospho-acceptor) domain CXD88_RS19960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CXD88_RS19975 PF01970 Tripartite tricarboxylate transporter TctA family CXD88_RS19980 PF00155 Aminotransferase class I and II CXD88_RS19985 PF00313 'Cold-shock' DNA-binding domain