CXD91_RS00015    3394 ..    3417 +  -6.8  -2.96979   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCTGTTCC  51 16
CXD91_RS00020 NONE
CXD91_RS00025    5210 ..    5241 +  -3.6  -3.14344   ACGCGGCCAGCGGCG      CTTACCG-CGCCG GCTCGTA CGGCGTCGGGCAG      TTGCTGGCGGCCGTG  45 103
CXD91_RS00035    6413 ..    6434 +  -7.3  -4.09685   CTCAGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  67 116
CXD91_RS00040 NONE
CXD91_RS00045    6668 ..    6680 +  -2.7  -3.65046   GTCATGGGCACCATC                GAATT CTA AGTTC                TTCTTCAAGTCAGAA  53 28
         tuf    7926 ..    7960 + -18.1  -3.72893   AAGGCGCGGTTTTCC    CATGGATAGAGGGGCC GGAT GGCC-CTCTATCCATG     TTTGCTGGAAAAGTA  93 39
CXD91_RS00055 NONE
        secE NONE
        nusG    9056 ..    9074 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CXD91_RS00075   10300 ..   10321 + -14.5  -2.62184   ATAGAACTTTGGGCC           GCATCCGGA CTTG TCCGGATGC            TGCTGTCAAAGACCG  71 55
CXD91_RS00080   11043 ..   11056 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG CGTC CGGAA                TTCGCTGAACGACAA  41 31
CXD91_RS00085   11517 ..   11549 + -17.7  -4.35524   AGACCTCGCGTCGAC      GCCCGGGGACAGC GCTCTTA GCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 40
        rpoB NONE
        rpoC   20076 ..   20099 + -16.8   -4.4078   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 83
CXD91_RS00105   22150 ..   22174 +  -3.4  -3.02144   AGCCCCAGGCCAGCG          CCGCCTACTT CGTTC GAGCCGGCGG          TGTTGACGCGCGTAA  42 228
CXD91_RS00125   27452 ..   27486 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS00160 NONE
CXD91_RS00165   34454 ..   34511 + -16.7  -3.53224   ACCTGATGGCGCTGT GCGAACCCGCGCCATGACGCCGGGCCGG CGC CCGGCACGGCCCCGCGGCCCGGGC-CGC TTTGCGGGCCGACTA  86 9
CXD91_RS00170 NONE
        glyQ NONE
CXD91_RS00185 NONE
CXD91_RS00190   40595 ..   40613 +  -2.2  -2.53015   CAACTGCTGCAGGAG             GCCTGATC CAT GGCCTGGC             TGCGTTCGGCGCTGT  37 20
CXD91_RS00195 NONE
CXD91_RS00200   42211 ..   42236 +  -5.9  -3.74693   CCCTGCCGCAGTTCT         GAGCCCGCGCC GGCT GGCGCGGCCGA          TTTGCTACGATGACG  59 24
        gloA NONE
CXD91_RS00210   43600 ..   43610 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  57 407
CXD91_RS00220   45098 ..   45110 +  -6.2  -2.71144   GGCCACGCCCGGGGC                CGCC GGCCA GGCG                TAATTGGCCAGGCTG  47 509
CXD91_RS00230   46039 ..   46051 +  -6.2  -3.96531   AGTCTCGATTCGTGG                CGGC ATCAA GCCG                TTTATCCATATCTGA  64 315
CXD91_RS00240   47473 ..   47511 + -10.9  -3.14132   GGGCCAGGTTGATCT  CCAGCGGCGCGGCGGC GCGGGAAG GCCGCCGCGAC-CGGG   TTGGTGCCCAGCAGC  64 520
CXD91_RS00250 NONE
        metW   50078 ..   50088 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 97
CXD91_RS00265   51098 ..   51113 +  -3.2  -2.70932   TCACAGCTAGCAGGA              CCGG CGCGCCTA CCGG               TCGTTCCACGGGAGA  40 31
CXD91_RS00270   52437 ..   52452 +  -7.5  -3.14527   CGCTACCCGCGCAAG              CCGCC CGCAGT GGCGG               TATTGATAACAATTC  54 71
CXD91_RS00375   70070 ..   70080 +  -4.6  -3.07013   CAAGCATGGACGCAT                 GTCG CAA CGGC                 TGTATTGACCCAGTG  45 59
CXD91_RS00380   70668 ..   70678 +  -4.6  -3.10464   ATTCAACAAGAACAC                 CGTG CAG CGCG                 TGTTCCAGTTGATGG  47 249
        htpG   73562 ..   73594 +  -6.8  -4.08767   ATGCGCTCGATCAAG      GGGTGGCTGTCCCC GCGCG GGGGGCTGACACCG      TTTTGGCAGGCTGGC  67 43
CXD91_RS00420   77804 ..   77838 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS00430   79792 ..   79808 +  -2.1  -4.07568   AGTCTTCCCCGATCA              GCAGTTC TTC GTACAGC              TTTTCCCCGGGCCGC  58 213
        waaC   92972 ..   92998 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ACA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CXD91_RS00495   94274 ..   94284 +  -8.2  -3.14132   ATTGGCTGGGATAGC                 CCGC CGT GCGG                 TTCGTCAGGGCCGCA  56 27
CXD91_RS00515 NONE
CXD91_RS00520   98558 ..   98572 +  -4.2  -5.01732   CATGCCGGCCACCAT               CCCG CTGCGGC CGGG               TTTTTTCCAGCGCTT  81 404
CXD91_RS00530 NONE
CXD91_RS00535  100410 ..  100423 +  -2.4  -3.51934   TGACCCGGCCCGCGT               TGCA TCACGT TGCA                TGTTTGTAAGCGCAA  48 38
CXD91_RS00540 NONE
CXD91_RS00545  102743 ..  102768 + -13.2  -3.61178   CTGTAGCGGCCGGCA         GGCGGGCGGC CCTGGC GCCGCCCGCG          TTTCGCGTCCCTCGC  77 35
CXD91_RS00550 NONE
        lipB  103778 ..  103800 + -12.7  -3.31792   CTTTTTTGTCTCGAA           CCGGAGCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  71 49
        lipA  104853 ..  104873 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
        metC  111548 ..  111567 + -10.7  -3.89346   CCCATCAACGACAAA            GCCTCCG CATGGA CGGAGGC             TTTGTGGCGTCGGGG  77 53
CXD91_RS00615 NONE
CXD91_RS00620  115786 ..  115814 +    -6  -3.78419   GTCCGCAGGGGGACT        GGCACCGG CCAAATCCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 100
CXD91_RS00625  117066 ..  117081 +  -5.4  -2.72991   CCATGCTCCATCCGG              GGACAGG CAC CC-GTCC              TCCTTCAGCGTATCC  45 81
CXD91_RS00690  129777 ..  129819 +  -5.5   -3.1247   ACGGATCGCCGTCGA TACGGTGGCGGACCAGCTGC CAGG GCTGCTGCTGCGCCAG-GTA TTCGCTGTCGAAGAT  47 466
        rpoN  133636 ..  133651 +  -6.2  -4.30833   CCACGCCGCGGGTCG              TTAGGA CGCC TCCTAA               TTTGTTCCTGATTTC  73 22
CXD91_RS00710  134048 ..  134079 + -16.6  -3.96148   GAGCGACGCGGCGCC      TTGCGCCAGCCGGC TCAT GCTGCCTGGCGCAA       TTTATCGTCCCCACA  93 39
CXD91_RS00745  143838 ..  143851 +  -5.2  -3.77188   CGGGACGGATCCAGG               GCGC CGCATT GCGC                TATTTATGTTTCAAT  60 70
CXD91_RS00750  144611 ..  144631 +  -8.9  -3.96148   GAGCCGGGCGACGAC            CGCCTGCGC GTC GCGTAGGCC            TTTCTCCTCACGACA  70 8
CXD91_RS00780  151343 ..  151376 +  -7.4   -3.1505   CGGCCACGCCGGCCA     GCGCGCCGACCTGGT AGACC ACCAGGTCGTAG-GC     TTCCTGCGGGGTGAT  54 510
CXD91_RS00805  155112 ..  155133 +  -6.5  -4.28361   GAAGCGCACCAGTTT           C-TCGGCCAC TTC GCGGCCGATG           TTTTCCTGGGATTCC  72 374
        ubiE  161869 ..  161884 + -11.8  -3.53811   AAGGTTTGCCGCGCA              GGCCCC AACC GGGGCC               TTTCCAGCCGCTCCC  72 121
CXD91_RS00845  163039 ..  163066 + -19.2  -3.30007   CGGCCGGGCTGCACC        GTGAACCGGCCC GCCA GGGCCGGTTCGC         TTATGGGCCGGTCTT 100 103
CXD91_RS00850 NONE
        ubiB  165689 ..  165721 +  -4.8  -3.13403   TCAAGATGAACGCGA     TCACCGAGTGGGCGGC CTT GCCGGCCAC-CGA-GA     TGTTCCTGCGCGACA  47 330
CXD91_RS00885 NONE
CXD91_RS00890 NONE
CXD91_RS00895 NONE
CXD91_RS00900  174609 ..  174630 + -17.3   -4.7373   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG 100 48
CXD91_RS00910 NONE
CXD91_RS00915  176495 ..  176512 +  -6.3  -3.05844   ACAGGTCGTCGGCGA             TCAG-CGC CTC GCGGCTGA             TCTTGCGCTCGGGCG  49 219
CXD91_RS00925  178023 ..  178033 +  -6.8  -2.62735   TGGGCCGCCGGTTCC                 CAGG AGT CCTG                 TCATGTCCGCAATCT  47 104
CXD91_RS00930  178835 ..  178867 +  -2.6  -3.92324   TGGCGGCGCCGCGTC     CAGCCCC-C-GCGCCG TAG CGCCTTGGCGGGGCTG     TTTACTATTACGCCC  56 9
CXD91_RS00935  179756 ..  179800 +  -8.3  -3.92324   GGGTTCGGCCTTCTC GTCGGCGTGGCTGGCGGCCAG CAC CATGCCCTCGGACACGCCGAA TTTCATCTTGCGCGG  70 135
        apbC  183467 ..  183484 +  -3.3  -3.14125   TGGTGGTCCGGCCCG             CCTGACG CATG CGTCGGA              TATTGCGTGTCTGCC  44 21
CXD91_RS00955 NONE
CXD91_RS00960  189074 ..  189086 +  -7.7  -3.37344   GCGGCGGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  59 49
CXD91_RS00965  189865 ..  189886 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC CTC GTCGGGCTGC           TTCATGTAGCGGGAA  52 216
CXD91_RS00985  191701 ..  191729 +    -8  -5.24129   GTCCTACAATTCCCC        GAGGTCGGCCCG CTCGT CGGGCCGGTTGC        TTTTTTGTCACCAGC  95 76
CXD91_RS00990  194084 ..  194123 + -33.6  -3.65812   GCAGTAAATCCGACG  CGCCGCGCCGCGCCGCCC GAGG GGGCGGCCCGGCGCGGCG   TTGTCTTCGAGGGAG 100 34
CXD91_RS00995  195391 ..  195401 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS01000  196418 ..  196443 +  -4.7  -3.72481   TAGCCTGGCGGGCAC        GGCGCATGCGG GCAGGG CCGC--GCGCC         TATTGTTTTGGTAAA  55 38
CXD91_RS01005 NONE
CXD91_RS01010  198057 ..  198072 +    -6  -3.55444   AACAGGGGCGGATCG              GCGCCC ATCC GGACGC               TTTGCGGCATGGCGC  56 49
        gcvT  199550 ..  199573 +  -7.4  -3.97368   GGCTTCCGCGCGGCC          GTTGGC-CGCC GGA GGCGCGCAAAC          TTTCTCCATTCCCAC  68 47
        gcvH  200007 ..  200027 +  -8.1  -3.90744   CAACGGGCCGGCCCG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAAAAC  68 48
        gcvP  202927 ..  202972 +    -9  -3.75665   GTGCGCGCTCATGGC GCATGACGAGGTGCCTGTCCCC CCAT GGGGACTGGCACCT-G-CAAGA TTTCATGGCGTCTGC  68 44
CXD91_RS01035 NONE
CXD91_RS01040  206457 ..  206493 +  -6.6  -4.26019   CTTCGGCCTGTGCCT   GTGCGCCGACCTGGTG CTGGCCA CGCCAG--CGGCGCGC   TTTTGCCTGTCGTTC  70 411
CXD91_RS01050  207664 ..  207699 +  -3.2  -3.56568   GTGGCCACTTGTGCC    GCAATGCGC-CAGCAGG GAA CTTGCTACGCGCATCGG    TTTGGCAGATCATTG  49 54
CXD91_RS01055  208571 ..  208582 +  -7.2  -3.60098   GGGCTTGCCGTTCAT                GCCG ACCA CGGC                 TTTGGCGTAGCCGGT  60 481
CXD91_RS01090  213383 ..  213397 +  -4.2  -3.72893   CAGGGTGCGCGTCAG               GCCG ATCAGCC CGGC               TTTGGTCGCCGAATA  55 352
        queC  223938 ..  223951 +  -4.5  -2.82623   GCATCAGGACGGTGT               CGCGCC ATT GGC-CG               TGCTTGTAGCCCACC  44 126
CXD91_RS01130  225469 ..  225503 +  -8.4  -2.84298   CCTCCAGGCATCGCC     GCGCGACTGAGCCTGG CGC CCGGCCTGCGTTGCGC     TAGTTGTGAACTGTC  54 16
CXD91_RS01145 NONE
CXD91_RS01150  228851 ..  228872 + -18.7  -3.41051   ACGACTTTGCTGTGC           CGGGCGCCC CTTG GGGCGCCCG            TTGTCCTACCCGTAG  93 80
CXD91_RS01155  230437 ..  230459 +    -4  -4.18018   CCACCGCCTTTTCCT           GCATGCCCTG CTG CAGCGCGTCC           TTTTCGCTGACGCCC  63 123
CXD91_RS01165  233218 ..  233237 +  -5.6   -4.7497   GGCCGGCGCAACCGG            GACAGCCT TGCG GGGCTGCC             TTTTTCATGGATGGG  81 64
CXD91_RS01170  234322 ..  234332 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 76
CXD91_RS01175  235312 ..  235357 + -13.5  -3.14132   CAACCTGGACGAATA CAACCTATTGACAGTTCACAG CTAG CTGTGATGTCTCAATAGGTTG TTCATCCAGGCCGGA  72 1
CXD91_RS01180  236539 ..  236573 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS01200  239866 ..  239904 +  -7.3  -3.14229   AGGCGGCGCTCGAAG  GCGCCGACGGCGCCC-TGC AGG GCATGGGCCCGGGCG-CGC  TGTTCATCAACATGT  52 315
CXD91_RS01220  245043 ..  245061 + -11.6  -3.04144   ATCATCCATCCCACG             GCGCCGGC GGC GCCGGCCC             TGTTCGCGCTGGCCG  65 367
CXD91_RS01230  247064 ..  247111 + -10.4  -3.01712   AAGGCAATCTGCAGC CCTGACCAGGGGAGCCGCTGCCC TCA GCGCAGCGGCTCGA-TGGCCTGG TCTTCCAGCGCGGCC  60 21
CXD91_RS01255  251701 ..  251730 + -23.7  -3.18264   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 97
CXD91_RS01270  255334 ..  255363 + -23.7  -2.62616   CGACACCCGCGGCAA       GGGTGCCTGTCCC AGCC GGGACAGGCACCC        TGCTGTACGCCATCG 100 72
        fumC  258829 ..  258841 +  -4.7  -2.52464   GCGCGCCGCTAGAGC                GGCGC CGG GCGCG                TCAGTTGGGCGCGCC  42 29
CXD91_RS01295  260970 ..  260985 + -11.8   -5.4505   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC 100 54
         ggt  264155 ..  264174 +  -5.6  -4.36914   CGCCAGGAAGATCGG            CCCGGCGCC GGT GG-GCAGGG            TTTTATACGGCGCGA  69 414
CXD91_RS01325  267989 ..  268006 + -14.1  -3.84451   GTCGAACCAGGAAAA             CGCCGCC GTCA GGCGGCG              TTTGCGTTTGCGCAA  83 441
CXD91_RS01335 NONE
CXD91_RS01340 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC  275099 ..  275136 +  -2.7  -2.71041   AGGCCGGCTGCACCG   CGCCGCGCCCATGT GACTGGCCTAA GCATCGGCGC-GCG   GTTATAGTTCGCCTT  40 10
CXD91_RS01365  275857 ..  275883 +  -8.7  -2.84812   CCCAATCGGGCAGCA        CGCG-CACCAGG CCTG CCTGATGGCGCG         TGTCATGCTGTCGCT  54 157
CXD91_RS01375  277288 ..  277329 +  -7.9  -4.18488   CGGCCGGACACTGTG GGCAGTGCTTCGCGCGCAGC ATG GCTGCGCCAGGCGCA-TGTC TTTCTTGCCATCCGT  74 167
CXD91_RS01405  282047 ..  282096 +  -7.9  -3.91084   TGCTGACCTGAACGG CCTGGC-GCGGCGTCATGCCTGCT CGGGC GGC-GGCGTGA-GCGGCAGCCGGG TTTCCTTCAGGCTGC  68 30
        ilvB  284548 ..  284587 +  -4.9  -3.76224   GCCTACACGCAGCGG CCGCCATCCACCTCCAGGC AGGC GCC-GGTGATGAA-GGCGG  TTTCGTCGCTGGCCA  58 94
CXD91_RS01455  296125 ..  296178 +  -9.4  -3.25823   CAATTGGTAGGCCCA CAGGCCGTCGGC-GCGGCGCAGGGCG AAAT CGCCGACCGCGGCCGCC-ACGTCCTG TTGCTGTGGCCCCAG  61 390
CXD91_RS01485  304652 ..  304679 +  -8.4  -3.25823   CCGGCCGGCGGTGGT        GACCGCCAGCGGC ACG GCC-TTGCCGGTC        TTGATGTGCGGCAGG  59 351
CXD91_RS01495  306707 ..  306728 +  -4.3  -3.05596   CGCAAGTAAGGACGG           GGCCGGCAT GGCG ATGCAGGAC            TTCCGTCCCGGCGTC  45 32
CXD91_RS01500  306962 ..  306986 + -17.1  -3.20991   GGAGCAAGGCTGACC          CGACGCCGGGC CGC GCCCGGCGTCA          TTCACTTCACTTCGA  84 28
CXD91_RS01530  315796 ..  315840 +    -2  -3.17723   CGCGCCCGCTACGCC GC-CTGGAAACGCA-CGATGCC GTC GGCATCGGTGCGGCGCTTGAGC TTGCCTTCGAAATAC  42 56
CXD91_RS01540  317362 ..  317387 + -13.5  -3.38522   AAACCCGACTCAACT         TTACGTTTACG TTTA CGTAAACGTAA          TATTTGCACTGCATC  75 91
CXD91_RS01585  326291 ..  326312 + -11.5  -3.57144   CGCCCCCAAGCAAAA           GAGGCTGCC TCAC GGCAGCCCC            TTTCGGCATACGACG  72 95
        rpmH  331928 ..  331944 +  -2.1  -2.78384   CCGCCGCGCCAAGGG              CCGCAAG CGT CTGGCCG              TCTAATCCAGGCGGA  38 4
CXD91_RS01610  332401 ..  332445 +  -2.8  -4.12902   AGATGCTCACTTCAC ACGGAT-AGCGCGATGATCAG GAGA CTGCTTATCGCCCCGATCCGG TTTTACCGGTACTTC  59 10
        yidD NONE
        yidC  334443 ..  334462 + -16.4  -5.55664   GAGCCAGCCACGAAA            CGGCGCCC TGCG GGGCGCCG             TTTTTTTCGTCCTGG 100 43
CXD91_RS01635  336979 ..  337024 + -14.8  -2.78384   CAGAGCGACACGGCC CGGCCGTAGG--GCCGGCCTCAG GCC TTGCGGCCGGCGACCT-CGGCCG TGTCCTGCGGCGCCG  72 17
CXD91_RS01645  339649 ..  339675 +  -7.1  -2.82516   AGCCGCTGCGCCGGA         ACGCCTCGGCC TCGTC GGCCGGCGCGC         TCTGGTCGTACAGGG  50 68
CXD91_RS01655  342450 ..  342482 +  -3.3  -3.28791   GCGGCACGGACGATG     GCGCGGCGGG-TGG CGGCCT CAATCCCGCCGTAC      TTGTGGGCCGCACAT  47 393
CXD91_RS01745  352087 ..  352102 +  -8.2  -3.09273   CCTGATCCTGGTGGG              GGCCGC TGTG GTGGCC               TATCTATTGGCGCGC  56 199
CXD91_RS01750  353064 ..  353088 +   -15   -4.2828   CACCCTTGTGAAAAA         CCCCGCC-GGC GCAG GCCTGGCGGGG          TTTTCATGGGTGGAC  95 52
CXD91_RS01775  356677 ..  356692 +    -6  -3.15579   GCGGATCTTCCGCGA              GCGTCG GGCA CGCCGC               TTGCTGGGGCGTTGG  51 71
CXD91_RS01780 NONE
CXD91_RS01785  357130 ..  357146 +  -3.5  -5.00616   ACGCTGTCCGGCATC              GCGCCGG GCG CAGGCGA              TTTTTTCAAACGCAA  81 127
CXD91_RS01790  364381 ..  364417 + -11.3  -3.09785   GTGGCGTATTGACCG    GGGGCCGGGCCGGCCGC TCG GCGGCCGGCATTGCGGC    TATATTGGCGTATGC  64 29
CXD91_RS01795  365103 ..  365118 + -11.8  -5.10461   GCCCACGTTTTGAGA              CGGCCC TTGC GGGCCG               TTTTTCTTGCGTGCG 100 118
CXD91_RS01800 NONE
CXD91_RS01805 NONE
CXD91_RS01810 NONE
CXD91_RS01815 NONE
CXD91_RS01820 NONE
CXD91_RS01825  371216 ..  371232 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD91_RS01845 NONE
CXD91_RS01850  375155 ..  375173 + -10.3  -3.07222   CGCGCGGCATTGCCT             TCCTCGC AGGCC GCGAGGA             TCTTCAGGTGCTCCT  59 110
CXD91_RS01870 NONE
        rimO  380543 ..  380562 + -11.4  -3.28712   CGGCGCTCAAGCCGC            GCGCCATG AAGG CGTGGCGC             TTGTAGCGCAGCCAA  66 434
CXD91_RS01885 NONE
CXD91_RS01890 NONE
CXD91_RS01895 NONE
CXD91_RS01900  383484 ..  383504 + -11.8  -3.36492   ACGAAGACGTCCACC            GGCTGGCG CTTGC CGCCGGCC            TTCTGCAATTCCAGC  66 82
CXD91_RS01930 NONE
        dprA NONE
CXD91_RS01940  390330 ..  390358 +  -4.3  -3.20723   CCCATACGCCCTCCT        CATGCTACGCGGC CTC GCCGCATCGCCCG        TTCCATTCATGAACA  47 131
CXD91_RS01945  391055 ..  391091 +  -2.2  -4.28254   CAGGTTGGCGCCGGC   GCCCGGCGTCACGCC-CA GGA TGCGGCGC-ACGTTGGGG   TTTTCGCTCTTGAGC  65 237
CXD91_RS01965  395613 ..  395638 + -10.3  -3.35679   GCACGGCCACGCCGT         CGACCTGGCGC ATCT GCGCCACGCCG          TTCTCGGTGACGACG  63 290
CXD91_RS01980  397812 ..  397846 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS02005  401634 ..  401648 +  -8.5  -3.14132   AGCACGACCAGCATG               CCGCC GCACA GGCGG               TTGATCCAGCGCAGG  56 123
        rsmB NONE
CXD91_RS02020 NONE
CXD91_RS02025 NONE
CXD91_RS02030 NONE
        trkA NONE
CXD91_RS02040  410184 ..  410210 + -11.4  -2.70232   TTCTGGCGCAAATAG         CGGCGCGCGCGG CCG CTGCCCGCGCGG         TGGTGTACTATTCAG  62 26
CXD91_RS02045  411169 ..  411211 +  -3.2  -3.14344   TGTCGTCCGGCATGG TGGCGACCAGCGTGGCGTGC GGC GCATGCCAGGCTGCATGGAA TTCCTCGCGCGGGTC  45 398
CXD91_RS02055  412674 ..  412709 +  -2.3  -3.54424   CGGACTGCCGCGGGT    CGCTGGCCGGGCGCG TAAAGT CCCGCATGGCAAGGG     TTTCGGCGCGTCCCG  48 167
CXD91_RS02060 NONE
CXD91_RS02065  414833 ..  414879 +  -8.6  -3.53224   TGTCGCAGTCGGGGC CG-CAGCTGGACTATGGCCTG GATGTG CAGGCCGAGGACCTGCTGGCG TTTGCGCGCGCGCTG  62 262
CXD91_RS02075 NONE
CXD91_RS02080  417380 ..  417391 +  -7.2  -3.68351   TGGATGCGGCGATCT                CGCC GTCT GGCG                 TTTCGCTGGTGACGC  64 278
CXD91_RS02105 NONE
CXD91_RS02110 NONE
CXD91_RS02115 NONE
CXD91_RS02120 NONE
CXD91_RS02125 NONE
CXD91_RS02130 NONE
CXD91_RS02135 NONE
CXD91_RS02140 NONE
CXD91_RS02145  431581 ..  431600 + -13.6  -4.52589   ATAGTGGTTACCTGC            CGGGCGTT TGGT AACGCCCG             TTTTATCTAAGGGAA 100 37
CXD91_RS02150  433259 ..  433273 + -11.4  -3.09635   CGGCGCCCGCCAGGC               GTGGCC GTA GGCCAC               TTCGATGCTCAGGCT  62 125
CXD91_RS02160 NONE
CXD91_RS02165  435863 ..  435884 + -10.1  -3.05384   AAACCGGCGTGCACG           TCGCCGCCG ATGA TGGCGGTGA            TTACCTGCGGAAAGC  59 423
CXD91_RS02195 NONE
CXD91_RS02200 NONE
CXD91_RS02205 NONE
CXD91_RS02210  443807 ..  443841 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS02225  445740 ..  445776 + -23.8  -2.71693   ATGTAAACCCCCCAC    CCGGGTGCCTGTCCCC GCACG GGGGACAGGCACCCGC    TGACTTTCCTTCCTC 100 35
CXD91_RS02240 NONE
CXD91_RS02245  450437 ..  450468 +   -15  -2.60075   GGGCCTCGTCCTCAT      GCGAACGCGCCGCC CTCG GGCGGCGCGGCTGC       CTTCATTCGACCCGC  71 45
CXD91_RS02330 NONE
CXD91_RS02335 NONE
CXD91_RS02340 NONE
CXD91_RS02345 NONE
CXD91_RS02350 NONE
CXD91_RS02355 NONE
CXD91_RS02360 NONE
CXD91_RS02365 NONE
CXD91_RS02370  477825 ..  477853 +  -3.7  -3.31726   GTCCACCAGCGCCAC       CCCG-GCGCCGG CCTGGA CCAGCGCGCAGG        TATTCTGTGGCGACC  47 199
CXD91_RS02380  479727 ..  479737 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS02385  480781 ..  480809 + -10.3  -2.57026   TCTGGATGGGGGAAA       GCGGCCGGC-CGG GCTTG CCGTGCCGGC-GC       ATTGGTGTCACTCTA  57 65
CXD91_RS02420  487245 ..  487289 +    -4  -2.87132   GGCGTGGCGCGGGGG CCGCCGGCGGATGACGCCGCG GCCG CGCGGCGGCAA-TACCTGCGA TGTATCGGCCGACCC  43 12
CXD91_RS02425 NONE
CXD91_RS02430 NONE
CXD91_RS02435  490582 ..  490627 +  -8.9  -3.32769   GACGAAGTTGGCGGT GGTCGGCGTGGCGTT-GTCGGG ATG CACGGCCAGGGCGATGCCGACC TTGATGGTTTCGGCC  59 105
CXD91_RS02445 NONE
CXD91_RS02450  493854 ..  493876 + -10.4  -4.69622   CCTAGCGTCGTCCGC           ACGCCGCGCC GCC GGCGCAGCGA           TTTTTCCCCTTGTCT  93 36
CXD91_RS02455  495310 ..  495325 +  -2.6  -4.08216   CAGGAAGCGCGACAC              CATGTAG TAG CT-CATG              TTTTCCACGCAATAC  58 233
CXD91_RS02485  501255 ..  501270 +    -6   -3.5774   TTACCGCTCAAAGCG              CCGCGG CGAA CAGCGG               TTTCCACGATTCGAT  56 63
CXD91_RS02515  510569 ..  510590 +  -5.7  -3.30771   CCCGCTCAGGACATC           GGTAAGCGC CGCG GCGCTGCCC            TTGTACGGAATGTGC  51 409
CXD91_RS02540  514027 ..  514056 +  -7.7  -3.14132   CTGCCTGAGCGCCGC       GAGCCGCTCGCCG CACA CGCCCAGCAGCTC        TTCGTACACCCCGGC  54 33
CXD91_RS02550 NONE
CXD91_RS02555  516394 ..  516414 +  -3.1  -2.77192   CAGCACCGAGCCATA            GAGCAGCGG CTG CTGCAGATC            GTTCTTGCCGGCCTT  39 97
CXD91_RS02580  523389 ..  523415 + -23.8  -4.79223   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 34
CXD91_RS02625 NONE
CXD91_RS02630  534949 ..  534986 +  -8.3  -3.28924   CCATGTCCAGCGAGG   CGTCGTCGGGTACCTGG CCGG CCAGGTAGGCCACGCCG    TTGTAGACAGCCATG  59 441
CXD91_RS02645 NONE
CXD91_RS02650  537599 ..  537642 +  -3.1  -4.58685   GGTCGAAAACTACTG GTAATCCCCCCTATGGCAGGG GGAA TCC-GCCATGAGGGGG-TCGC TTTTTCACAACATTT  71 22
        phaZ  538997 ..  539012 + -11.8   -4.2687   GCGCGCTCCCTGCAA              CGGGCC GCCT GGCCCG               TTTCTGCTTTTTACG  91 48
        rsxB NONE
         nth  540386 ..  540400 +  -3.4  -3.88985   ACATCGTGGGAAACA               CCGTGG AAA CCCTGG               TTTCTGAAGCGTTTT  56 108
CXD91_RS02670 NONE
CXD91_RS02675 NONE
CXD91_RS02680  543329 ..  543339 +  -8.2  -2.52516   AACCTCCTGAAGGAA                 GCCG ACA CGGC                 CTTGCTCATCCGGCA  51 39
CXD91_RS02685 NONE
CXD91_RS02690 NONE
CXD91_RS02695 NONE
CXD91_RS02700  547244 ..  547278 + -30.1  -3.09516   GCTGACCCGCGCGCA     CGCTGGCGGCGCGGC GCCAG GCCGCGCCGCCAGCG     TTCAGTCCTGGGCGC 100 36
        msrB NONE
CXD91_RS02740 NONE
CXD91_RS02745 NONE
CXD91_RS02750  555688 ..  555717 + -19.5  -4.13767   AGCCATCGCCATCAA       CAAAATTGCCCGC TTTC GCGGGCAATTTTG        TTTTCGGCTGCCGGG 100 47
        lplT  564297 ..  564325 +  -6.5  -3.74747   CAGCAGGGCAATCTG        GCGCCGCAGGTAG GGA CTGCAGGCGGCGA        TTTCCTCGGGCTTGG  61 278
        ompR NONE
CXD91_RS02790 NONE
CXD91_RS02795  568500 ..  568510 +  -4.6  -3.10677   TAGCGTAGAATTTAG                 GGCT TGA GGCC                 TTGCCTGCCTTAATT  47 38
CXD91_RS02800  569107 ..  569123 + -10.8  -3.95584   GCTGTAATTTCCCCG              GCCCGG CTCGT CCGGGC              TTTCATTGCTCCAGA  79 34
CXD91_RS02805  569687 ..  569739 + -15.5  -2.79188   AGCGCCCCCCGCGGT GCGCCGGCCTCCCCCGCCGGCGGCCG CAGC CGGCC-CCTGCGCGGG-G-CCGGCAC TCATTCCCTTCCCTC  75 40
CXD91_RS02815  572383 ..  572399 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD91_RS02835 NONE
CXD91_RS02840  576125 ..  576151 +  -8.7  -3.53012   ATCCAGCTCGAATAG        GCGCGCCCGC CCCGGCCT GCG-GCGCGC         TTTGGCGCACCGCAG  62 26
CXD91_RS02845  577196 ..  577232 +   -16   -4.2558   GGCGCCTGCCCATTG   CGCGCCAA-TCCCGC CCAATCAA GCGGGAATTGGCGCG    TTTTCCTGGACAATC  95 41
CXD91_RS02850  578111 ..  578121 +  -2.4  -3.01497   AGTAAGGCGGCCGGA                 GCGG GAA CGGC                 TATGCTTTCGGCTGC  41 84
CXD91_RS02855  579523 ..  579555 +  -3.2  -4.72272   CGGCCGGCGCACGCC     GCCGGCGCGCGCCGG CCCT CCGGTTC-CGCCCCC      TTTTTCGTGGAGAAC  75 476
CXD91_RS02865 NONE
        argF  581838 ..  581860 +  -6.3  -2.58714   AAGCGCTAAAATGCC           CCGTTAGAC TTCTT GTTTGACGG           TCCGTTGCTGTCAAA  46 112
        argG  583255 ..  583284 + -23.7  -4.08394   GCGGCAACCGCGCGA       GGGTGCCTGTCCC TGCC GGGACAGGCACCC        TTTTGCCGCAGGTGT 100 41
CXD91_RS02940  596308 ..  596344 + -20.4  -3.34398   ATGGCCTGCCTTCAT   GAAAGCCCCGGTCAATC GCAT GATTG-CCGGGGCTTTC    TCTTTGCCGCGCCGC 100 60
CXD91_RS02950  597258 ..  597280 + -12.7  -5.63517   TGATGTGCCCAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGCC 100 65
CXD91_RS02960 NONE
CXD91_RS02965  600223 ..  600233 +  -4.6  -2.92371   CCAGCCAGCCGTAAA                 CCGG CAT CTGG                 TATGGTTGCCTCCAT  44 53
CXD91_RS02970  601967 ..  601977 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS02975  603200 ..  603232 +  -3.2  -3.05844   CCATGTTGCTCGACC      CGACCGTGGACCAC ACGCC GTCGACCACCGCCG      TCTTGGCGTGCAACA  43 244
        egtD  606655 ..  606669 +    -7  -2.71011   GCGCCCGCCACCCAC               GTCCGC AGC GCGGCC               TGCTTACCCGCCCGT  48 366
CXD91_RS03000  607836 ..  607867 + -20.4  -4.37886   CCAGAGAATTCAAAA      CAAAATGCCCGCAA TCGC TTGCGGGCATTTTG       TTTTGTGCGCGATGA 100 38
CXD91_RS03015  609318 ..  609358 +  -5.8  -3.58536   AGGCTGCGCCAGTCT  ACCGCCGCGGCCGGCGCG CCATT CGCGGGGACTGAGGCGGC  TTTGGCCGTCAATTT  57 309
CXD91_RS03025  610072 ..  610127 + -13.9  -4.11216   CCAGTCTTGCCTATT GATGCCCTGCGCG-CCCTATCGTGGA CATAT TCGGCGCCAGGGCCGCGCAGGGCGAC TTTTAACCGTAACGG  85 77
CXD91_RS03030  611613 ..  611623 +  -8.2  -3.14132   GTCCGGCCAGCACTA                 GCGC GGC GCGC                 TTCGTCAGCGGCCGG  56 25
CXD91_RS03060  617507 ..  617526 +  -8.6  -3.68222   TGCCTATATGCATAT            TGTGAAGC GCGT GCTTCGCA             TTATTCAGATTCGCA  65 139
CXD91_RS03065  617842 ..  617863 +  -3.6  -3.86015   ATCCCGGCGGTCCGG           CGGCC-GCC ATCCG GGCTGGCCC           TTTATCCGCCCAATA  57 65
CXD91_RS03070  619006 ..  619020 +  -2.7  -2.69151   TTCCTGCCAGGAGTG               CGGCG ATGAG CCCCG               TAGTATCTGAAGCCA  40 82
CXD91_RS03075 NONE
CXD91_RS03080 NONE
CXD91_RS03085 NONE
CXD91_RS03090  622889 ..  622904 +  -7.5  -2.87132   CCGGTCTCGCCGCCC              CGGCG GCAAGG CGCCG               TATCTGCGAGGGGGG  52 139
CXD91_RS03095 NONE
        groL  625134 ..  625157 + -19.6  -4.86621   CTTCCCAAAAAAAAA          CCCCGCCAGG TTCG CCTGGCGGGG           TTTTTCATTGGAGCT 100 87
CXD91_RS03110 NONE
CXD91_RS03115  629889 ..  629902 +  -9.5  -3.53012   TCGTCCTGGACTGAG               CGGCG GCGC CGCCG                TTTCCAAGCGCGCCG  64 27
CXD91_RS03120 NONE
        pyrF  632091 ..  632126 + -20.4  -2.59748   TAAGAACGTAACCCC    CCGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCGC     TGACTTCTCAGGGTG  95 30
CXD91_RS03160 NONE
CXD91_RS03165 NONE
        phnD  639732 ..  639769 + -11.3  -3.02511   GGCCCGCGTGCGCGG   CCA-GTCGCTGCGCCG CGCGCGC CGGCGCATCGGCATGG   TGTTCCAGGAGTACA  62 261
CXD91_RS03180  640915 ..  640946 +  -6.7  -3.78329   TCAATACCTGGATGC      GGCGC-TTCGAT CCGGCCGAC ATCGAACGCGCC      TTTCAATTGCTCGAC  64 101
        phnE NONE
        phnE  643165 ..  643185 +  -3.9  -3.59979   TCAATTTCCGGGTTA            GCTTTGGGT ACT ATCCTAGGC            TTTCGGCTCGGCGGG  51 167
CXD91_RS03200 NONE
CXD91_RS03205  645043 ..  645061 +  -2.2  -3.53091   CCGGTGAGGGTGATG             GCGGCGTC GAA GGCGCGGA             TTTGCGCCAGCGCGT  47 262
        rsmD NONE
CXD91_RS03220 NONE
CXD91_RS03225  647522 ..  647546 + -15.7   -3.9941   CCTCCCCCCCTCGCG          GCGCGCCGG CCTGTCA CCGGCGCGC          TTTCGTTGTCGGCCA  91 59
        benE  648705 ..  648731 + -12.2  -3.57144   GGCCTACGACGGCCA         GCGCACCTCGGC CAT GTCGGGGTGCAC         TTTCAGGATCCGGCA  74 45
CXD91_RS03245 NONE
CXD91_RS03250  652889 ..  652905 + -13.7  -4.72272   CGCCTCAGAAAAAAA              GCCCTCC GCT GGAGGGC              TTTTTCGTGGGCCGC 100 49
CXD91_RS03260  655258 ..  655300 +  -3.3  -3.66874   TCGCCGTCGGTCAGC CTGAGCACGCGCGCGCGC GCCTGATA GCGC-CGCGCATAGTCGG TTTCGATGCGGTTGA  51 504
CXD91_RS03295  665516 ..  665530 +    -7  -3.41636   CGCCGACGTTCCGGG               CGCGCC CTC GTCGCG               TTCCTTGCCTTGCTT  56 172
CXD91_RS03300 NONE
CXD91_RS03305  667605 ..  667648 + -10.9  -2.57344   ATCAACCTCAACTGA CGGCA-GCCCG-GCGGGCGGC CCCG GCCGCCCCCACTGCCGTGCCG ATTGTCGCAAGACTG  59 26
CXD91_RS03310 NONE
CXD91_RS03315  670207 ..  670217 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 110
CXD91_RS03320  671400 ..  671413 +  -3.7  -2.71791   CAGGCCCTTCCTGCA               GCGGG CCGG CCGGC                GTTTCAACAAGACCT  41 204
CXD91_RS03330  671686 ..  671714 +  -3.8  -5.55769   CCAAACACCAAAAAG       GGAAGC-TAGCGG TTAC CTGCCGTGCTTCC        TTTTTTCTTGTAGCC  95 38
CXD91_RS03335  671818 ..  671837 +  -6.3  -3.94877   CTCCAAACACTTCAA            GGCCCGC CGCGTC GCGAGCC             TTCTTGTTCCAGGAT  64 35
CXD91_RS03340  672303 ..  672322 +  -7.1  -3.14468   CGTGATCCGGCCGTA            GCGCG-GC CCGGC GCGCGCGC            TTGCCTATAATGGCG  52 25
CXD91_RS03345 NONE
CXD91_RS03355 NONE
CXD91_RS03360  675012 ..  675024 +  -4.7  -3.54424   ACTGCCCTGGCTGGC                CGCCG ACA CGCCG                TTTCCCCCGGTCGAA  52 50
CXD91_RS03370  676522 ..  676559 +  -3.2  -3.00923   GCCGCCCTGAGCACG   CGCGGGGCGGCAAAGT CGATCT ACAATTCCGCCCCATG    TCTATCCTCTTCCAC  42 31
CXD91_RS03375  677630 ..  677642 +  -6.2  -4.74103   CCCGAGCGGGCATGG                GCCC CAAGA GGGC                TTTTTGCCTTGGGCA  82 49
CXD91_RS03385  679738 ..  679773 +  -8.8  -3.54424   GCGCATCGCGCGGCC    CGGCCGGCCGATCGGGC GAG GCCTGCGCGCCCG-CCG    TTTCGCGGAATGCGA  62 67
CXD91_RS03415  688611 ..  688628 + -10.5  -3.21218   TGCCAGTTGGCGCTT             GGGCGCG TTGC TGCGCCC              TTCCTGCTCGGGCGT  60 82
CXD91_RS03435 NONE
CXD91_RS03440 NONE
CXD91_RS03445  693098 ..  693110 +  -2.6  -3.07816   CGTCTCCACTAAGGG                CGGG TGGAT CTCG                TTGGCTGCCTCCAGA  41 29
CXD91_RS03450  694499 ..  694517 +  -6.7  -3.77832   TGTTGCGGCGCGCAT            C-CACCGG GTGG CCGGTGCG             TTCTTCGCTTTGCGC  61 313
        galU  697014 ..  697032 +  -4.4  -2.71924   GCGCTCGGTAAAGGC             GATGACCG CGC CGGCCACC             ATTTGCGGCGCCATG  40 299
CXD91_RS03480  701197 ..  701223 +  -9.5  -2.62184   CAGGCGCGCGCGCCG        GCTG-GCT-CGGC GGC GCCGAAGCGCAGC        TGCTGTACCGCCGGG  55 143
CXD91_RS03495  705094 ..  705108 +  -2.8  -4.09685   CGGAAAAGCGGCGCG               TGCC GGACAGG GGCA               TTTTAGGGGCTGGCG  59 521
CXD91_RS03505 NONE
        dusB NONE
CXD91_RS03515 NONE
        purH NONE
        ruvC NONE
        ruvA  710627 ..  710675 + -10.8  -3.30124   CGCGACCGCCTCCAG CGCGGCGGGCGGCGC-G-GCCAAC CCC GAGGGCGCGGCGCCGCTGGCCACG TTGTCGCGCGTGAGC  66 83
        ruvB  713984 ..  714018 + -14.9  -4.84359   GGTCGATGGGGTCGG    GCCGCGC-GCGGGCGC CCGC GCGCGAGCTGCGCGGC     TTTTTCTCGGCCTCG 100 272
CXD91_RS03560 NONE
CXD91_RS03565  718108 ..  718143 +  -9.1  -3.03124   AACGCATCGTAGTCC   TGCATCCAGGCGCGC CATTGCGC GCGCGCCTGG--GCA    TGTTCACGCATGGCC  55 336
CXD91_RS03580 NONE
CXD91_RS03585 NONE
CXD91_RS03590 NONE
CXD91_RS03595  723166 ..  723209 +   -21  -3.53091   CTACAAGATAGACTG ATCCCCGGGTGCCTGTCCCC GCAG GGGGACAGGCACCCGCTGAC TTTGCCCGCCAGGCT 100 25
CXD91_RS03600 NONE
CXD91_RS03605  725761 ..  725774 +  -2.4  -4.10144   CCTTGATAAAGCGCG               CGAT GCGCGG ATCG                TTCTTGTTGTCTTCA  58 151
CXD91_RS03615  727745 ..  727755 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS03620  729246 ..  729272 +  -5.9  -4.14243   TAGAGTGGGGTCTCT        GCAACACGTGCC CCAG GGCAC-TGTTGG         TTTTGCGCTGGAGTG  66 512
CXD91_RS03650  733038 ..  733051 +  -5.9  -6.06723   CACAGGATTGATCAA               CCGCT TTCG GGCGG                TTTTTTTTTCGCCCC 100 468
CXD91_RS03655 NONE
CXD91_RS03660 NONE
CXD91_RS03665  736430 ..  736464 +  -2.6  -2.74012   TCGGCACGCCATCGA     CCTGGTGCGCTACAGC AAC GGGGTGGTGCGCCGGA     TCATTGCGCTGCTGA  38 50
CXD91_RS03670 NONE
CXD91_RS03675  737789 ..  737813 + -15.7  -4.67038   CCTTCTTCTTTCTAA          GCCCTGCTGGC CGA GCCAGTGGGGC          TTTTGCTTTTGGGGC 100 77
CXD91_RS03680  738623 ..  738641 +  -3.9  -3.28924   GGCCGGCTTCGAAGG            CGACTTCC TCCA GGAA-TCG             TTCTACCAAGCCATC  47 186
CXD91_RS03695 NONE
CXD91_RS03700  740785 ..  740802 + -10.5  -3.65351   GCCGATTGACGGTTG             CCCCTGC TCAC GCGGGGG              TTTCCGTCAGCCTGC  70 43
CXD91_RS03705 NONE
CXD91_RS03710 NONE
CXD91_RS03715 NONE
CXD91_RS03720 NONE
CXD91_RS03725 NONE
CXD91_RS03730  743275 ..  743288 +  -9.5  -5.46657   GGGCGCAACTGGAAC               CCGCC ACAT GGCGG                TTTTTTATTGCCCTC 100 69
CXD91_RS03735 NONE
CXD91_RS03740 NONE
CXD91_RS03745 NONE
CXD91_RS03750 NONE
CXD91_RS03755  747666 ..  747686 +  -3.1  -5.32944   ATGAGTAATCCCGAA            CGCCGGGAT CTC GTCGCGGCA            TTTTTTCATTATCCG  89 33
CXD91_RS03760 NONE
CXD91_RS03765 NONE
CXD91_RS03770 NONE
CXD91_RS03775 NONE
CXD91_RS03780  753198 ..  753210 +  -6.2  -5.80817   CCAATGAATGAACGG                GCCC ATAGG GGGC                TTTTTTTGTGTTGAG 100 30
CXD91_RS03785 NONE
CXD91_RS03790 NONE
CXD91_RS03795 NONE
CXD91_RS03800 NONE
CXD91_RS03805  755981 ..  756001 +  -9.7  -3.54741   GAACAGCACGCGGTC            GCCAGCC TGAAAGC GGCTGGC            TTTCACCAGCTGCTC  64 405
CXD91_RS03820  756632 ..  756642 +  -8.2  -2.78216   GCACGTCGACCATGC                 CGCC CAG GGCG                 TCGTTCGTGACGATG  52 235
CXD91_RS03845  760514 ..  760532 +    -3  -2.65264   GGCGGGCGCCAGCCC             GCCCCG GCAGCCA CAGGGC             TCCTATCGATCGTGA  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB  764447 ..  764466 +  -2.8  -2.54325   CAACGTGGGGCCCTT            TTACCCGT TAAC ACGTGTGA             CTCTCTTTGCAAAGG  39 15
         pal  765017 ..  765046 + -21.5  -4.54727   AGCAGCCCCACCACG       CGTCGGGACGGTC ATCC GGCCGTCCCGACG        TTTTCGTTTCAGACC 100 56
        ybgF NONE
CXD91_RS03885 NONE
CXD91_RS03890  767697 ..  767724 + -10.5  -4.15453   ATAGGATGAGCACCT        CGC-CCGCCGCC AGCCC GGCCGCGGCGCG        TTTTCCGCTGACTTC  78 120
CXD91_RS03895 NONE
CXD91_RS03900  769094 ..  769105 +  -2.2  -3.21099   CCGGCCCTGCACTAC                GCGCG CCA CG-GC                TTCCTGGTCACGCCC  42 465
CXD91_RS03910 NONE
CXD91_RS03915  771209 ..  771263 +  -2.5  -2.70932   GCGCGCCAGCAGCCC GCCGGTCCAGGCCCGGCCCCAGGCCC GCAA GGTGTTGGCGCCGG-CGTGGCCCAGA TGCTTCCAGAACAGG  38 500
CXD91_RS03925  774373 ..  774387 +  -4.2  -3.64703   TGCGCGACATGATCA               GCGG CGTGTGC CCGC               TTTCGGTCAGCGCGA  51 297
CXD91_RS03935  776871 ..  776883 +  -9.1  -2.52464   GCCGCCAGCAAGGCG                TCGGC CAG GCCGA                TGAATTGCGCCACGC  51 100
CXD91_RS03955 NONE
CXD91_RS03960  783552 ..  783568 +  -2.2  -3.53012   CAAGGAGGCTGCAAC              GCGGTA TCCTC TACCAC              TTTGGCCCGAAGACA  48 94
CXD91_RS03965  784691 ..  784710 + -16.4  -3.15147   TCCGCCAGCCGGCAT            GGGCGGCG GACG CGCCGCCC             TGTCTATTGCTTGAC  81 388
CXD91_RS03990  788185 ..  788199 +  -3.4  -4.07687   CGCGCTTGGCGTCGG               CCTCGG AAA CCGGCG               TTTTCGCCGCCCGGT  60 247
CXD91_RS04025  797427 ..  797441 +  -2.1  -3.84406   CGCTCGCGCAGCGAC               GATTG CGGGC CGATC               TTCTTCTGGTAGGCG  56 430
        nspC  800352 ..  800371 +  -4.2  -3.18366   AGGATTACGTAGACA            GCCTG-TCC TGA GGAACTGGC            TCTGTTGATTGAAGC  45 15
CXD91_RS04045  801755 ..  801765 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 119
CXD91_RS04050  802874 ..  802900 + -10.1  -3.06133   TGCCGGCAGCGCAAC         GCTGTGGCCGT TTCGT ACGGCTACCGC         TTCAATCGAACATTC  60 130
CXD91_RS04055  803581 ..  803624 +  -2.8  -3.91897   GCATCACCATCGAGG CGGTCGCGGAAGCGGCGCGC TGAC GCCGGCCGCGTTCCCTACCA TTTGTACGTGACCCG  58 3
CXD91_RS04070  808279 ..  808295 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD91_RS04090 NONE
CXD91_RS04095  812960 ..  812988 +  -7.9  -3.07113   GGCCACGGCGGCAGC        GCGCGCGGCGGCG CTT CGCCACTGCCCGG        TTCCATCAGGTAGTA  52 295
CXD91_RS04105  814582 ..  814616 +  -8.5  -3.06183   TCGGCCAGCCATTGC     TTGCGCGCCGACC ATACCGGCA GGACCGCGCGCAA     TTCCGTGCCGATGCA  55 501
CXD91_RS04130  819016 ..  819036 +  -8.2  -3.12999   GCCGGGTATGAGTGT            GCGAGCCG CCGGC CGGCTCCC            TTACCTGTCGGATAC  56 101
CXD91_RS04135 NONE
CXD91_RS04140  820226 ..  820251 + -13.3  -5.15969   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG 100 108
CXD91_RS04150 NONE
CXD91_RS04155 NONE
CXD91_RS04160  826848 ..  826882 + -13.5  -2.99947   CATTGGGCGCCGCAC    GCCTGGCATCGGCGGC GCCG GCCGGCGAGGCC-GGC     TATCTGTGAAGATTC  70 152
CXD91_RS04170 NONE
CXD91_RS04175  830410 ..  830425 +  -7.5  -3.14211   GGTGCCCCGGCCTCG              CGGCG CGTATC CGCCG               TTGCTCGCGCGCAGT  54 62
CXD91_RS04185  831374 ..  831395 +  -2.1  -3.07291   CTGAGCGCTACACAC           CGGTTGCGT CGGT GCGAATCCG            TTCAATCGACTACTT  41 161
CXD91_RS04190  836560 ..  836588 +   -11  -3.31779   AAGCGCCGTGAATCA       CGGC-CCGCC-TGC CTC GCGCGGCGGCGCCG       TCTCTTTGCGTTCTT  66 40
CXD91_RS04195 NONE
CXD91_RS04200 NONE
CXD91_RS04205  841508 ..  841532 +  -2.7  -3.59979   CGCCTAAGGAGTAAC          CCTGCAAATCG CCG CGTTATGCAGA          TTTCGCATAACCGGC  49 27
CXD91_RS04210 NONE
CXD91_RS04215  843588 ..  843604 +  -6.5  -3.54424   ATATCAATGGAACTG              GGGCG TGCTGTT CGCCC              TTTCCCCGGATGGCG  56 129
CXD91_RS04225 NONE
CXD91_RS04230  845781 ..  845797 +  -7.9    -3.273   CCGTTATCCAATACT              CAGGCGG TAG CCGCATG              TCTTCCCTTTTCTAC  56 41
CXD91_RS04235  847127 ..  847140 +  -2.3  -3.44848   CGCTGTTGACGTAGA               AGACG TGGA CGTCC                TGTTTGGTGAAGCCC  47 497
CXD91_RS04260  851758 ..  851777 +   -15  -3.14564   CCGGCGAGCAAGCCC            CAGGCGGC GCCG GCCGCCTG             TTGCTCCCGCCATGG  76 151
CXD91_RS04265  853128 ..  853146 + -10.2  -3.04461   GTCGCCGGCGCGCAG             CGCGGCGA GGA TCGCGGCG             TGTTCGGCCTGGGTC  59 182
        pepN  868837 ..  868849 +  -3.3  -2.74192   AAAGCCTTGGATCTG                GCTGC TTA GGAGC                TACTCTTGAAACGTA  40 17
CXD91_RS04335  870040 ..  870074 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS04360 NONE
        serB  876575 ..  876597 +  -6.1  -3.16039   TCGCGACGGCCTCCC           GCCGCCCGG CCGGC CCGCGCGCC           TTACTCCGGCTGCTT  51 131
CXD91_RS04375 NONE
CXD91_RS04380 NONE
CXD91_RS04385  881740 ..  881756 +    -3  -4.11484   CATCGATTGCGGCTC             CAGCACC AGCC GGT-CTG              TTTTCAGCACTTGCC  61 509
CXD91_RS04485 NONE
CXD91_RS04490 NONE
CXD91_RS04495 NONE
CXD91_RS04500 NONE
CXD91_RS04505  905955 ..  905971 +  -2.1  -3.05384   GCTCATGCTCGCGCG              TTGACGC GCA GCGCCCA              TTCGGTGACGGCCAC  41 22
CXD91_RS04540  913228 ..  913261 +  -6.9  -3.09516   GGTAATCTCGCTTTG     ACTAATTATCCAAGA ATAT TCTTTGATAATTAGG      TTGCGTCATGAAAAG  52 108
CXD91_RS04545 NONE
        mexI NONE
CXD91_RS04555 NONE
CXD91_RS04560  919891 ..  919901 +  -3.2  -3.28712   GCGTATCGCCGGCCT                 TCAG GTA CTGG                 TTGTCCAGGCCCGCG  47 239
CXD91_RS04575 NONE
CXD91_RS04580 NONE
CXD91_RS04585 NONE
CXD91_RS04590  927832 ..  927883 + -12.9  -2.53876   CGATCGCCTCGGTCA GGAACTGCGGCGCGTCGCCGCGCA GCCGG TCCGCGCCCA-GCGCCGCGGTGCC TCCCTTCAGGTAGGC  62 232
        lrhA NONE
CXD91_RS04620  935361 ..  935379 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 303
CXD91_RS04655  944353 ..  944390 +   -12  -3.05816   ACTGGGTAGCCTGCC   GCAGCGACGCGAAC-GC GTGCA GCTGTTCGAGGCGCTGC   TTCCATGAGCGCTCC  66 470
CXD91_RS04685  949865 ..  949875 +  -4.6  -4.07568   GGGTGCACCATCAAA                 CGGC ACC GCTG                 TTTTCCCCAGGCCCG  62 31
CXD91_RS04690  950939 ..  950978 +  -2.8  -3.90291   TCGACCACGGTCTTC  TCGATTTCCAGCAGGACCA CGA TGG-CATGCTCGATATCGC  TTTCGTTGACCAGCT  56 434
CXD91_RS04700  953062 ..  953072 +  -4.6  -3.36327   CGGCCGCCTCGACAT                 TGCG CGC CGCG                 TTGTAGATGCGCTGG  49 255
CXD91_RS04725  957504 ..  957518 +  -2.1  -2.50816   AGCCCCAGCGGCCGA              GG-TCC TGCA GGATCC               ATTCGTAGATGACCA  37 520
CXD91_RS04755  963867 ..  963878 +  -7.2  -2.52623   TGCGTGGCCCCGGGC                CGCC CGTA GGCG                 ATGTTCTCGGCCAGC  48 497
CXD91_RS04765  966283 ..  966299 + -11.5  -2.77013   GAACGCCTGGGCTGA              GCGCGGC GAT GCTGCGC              CTTGTTACCGACATC  62 26
CXD91_RS04770 NONE
CXD91_RS04775  966790 ..  966809 +  -4.2  -4.00042   GACTACCCCGATACC            GGCCGT-TG AAC CGCGCGGCC            TTATTTGCTGCGCAC  59 17
CXD91_RS04785  968828 ..  968842 +  -7.1  -2.70932   AAGGTCAGCGTGCTG               CCGCT GTCGA AGCGG               TAGTTCAGCGCCGGC  49 365
CXD91_RS04800  971723 ..  971751 + -16.9  -5.53288   CGGCCAGACCGGAAA        TCCCATGCAGATC ACT GATTTGCATGGGA        TTTTTTTCGCTTCGG 100 59
CXD91_RS04805  974861 ..  974919 + -29.8  -3.25072   TTTCATCCCCTGTCC TGAAGC-CGGCCATCCGGCCG-CCGCGGC GCAA GCCGCGGGCGGCCGGATGGCCGCGCC-CA TTCCGTTCTCCTCCC 100 49
CXD91_RS04810 NONE
        accB NONE
CXD91_RS04820  978404 ..  978424 +  -3.9  -2.93853   AACACATTTCGTTCA            CGCGACC CTGAACC GGTCCCG            GTTTCGTTGCCACGG  43 15
CXD91_RS04825 NONE
CXD91_RS04830 NONE
CXD91_RS04835 NONE
CXD91_RS04840 NONE
        accC NONE
CXD91_RS04855 NONE
CXD91_RS04860  985479 ..  985497 +  -6.7  -4.11216   CACCCGCCGACGTCG            CGCGTTGC AGCC GCA-CGCG             TTTTGCAAGTAACGG  67 137
CXD91_RS04865  985819 ..  985834 +  -3.2  -3.10775   GTTATCGTCGCGGTT              GCGC CACCTGGA GCGC               CTTTTGCATGCGCGT  44 105
CXD91_RS04870  987045 ..  987057 +  -6.3  -2.88544   CGAAATCCTTTACAA                TTTGG CTA CCAAA                TGTGTAGGAGTGGAC  48 93
CXD91_RS04875  987301 ..  987322 + -17.3  -3.84451   TTGAGGGGCGCGCGA           CGGGCAGCC GGCA GGCTGCCCG            TTTGCATTTCGCCCG  95 37
CXD91_RS04880  987782 ..  987792 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 73
CXD91_RS04885  988854 ..  988890 + -15.7  -3.14132   CATGCCACCGGCATC    CGGCCGCTCGTCGACCT GCA AGGCCGTCAGGCGGCCG    TTCCTGCACGGGCCG  77 82
CXD91_RS04900 NONE
CXD91_RS04905  993028 ..  993040 +  -9.1  -3.17075   GGCCTATGCGCCGCA                TCCGG TGG CCGGA                TTCGCTTAGCCGCCG  59 4
CXD91_RS04920  995564 ..  995597 +  -5.8  -3.62046   CTGCCCGGGCTGCTG     CACGCGCGCGGGCG CGCCGT CGCTGGGGCGCATG      TTGTTCAGGAAGTCG  57 255
CXD91_RS04945 1002241 .. 1002251 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS04950 1003522 .. 1003573 +  -9.2  -3.21099   GGCCGGAACGTCGGG CAGCG-CCGGCGAGCGCTTGCGG CTCGTGA CGGCCAGCGCGCGCAGGTCGCCG TTCCTGATCAGCGGC  56 292
CXD91_RS04960 1005475 .. 1005506 + -11.6  -2.81133   TACCCACGCAAACGA      GAGCCCCGATACGGA TTG TCCA-GTCGGGGCTC      TCTGCTGGGTGCGTC  63 238
CXD91_RS04970 NONE
CXD91_RS04975 1007277 .. 1007302 + -18.3  -4.55798   TTAACAAACTATTTT         GCCCCGCGCGA GGTG TTGCGCGGGGC          TTTTCATTTCCCCTC 100 291
        gyrA NONE
        serC NONE
        pheA 1016784 .. 1016835 +  -4.5  -4.84761   GGCGTGGTTGACGCA CACCA-GGCGGCCGCCGTGACGGA GCGTGTG TCCGTC-CGGCG-CTGCCATATTG TTTTTCTGCAGGTAT  82 47
CXD91_RS05030 NONE
        aroA 1019079 .. 1019092 +  -3.1   -3.6692   GCGGGACTGAACGGC               GCC-TG CCC CATGGC               TATTTTCGCATCCGC  53 31
CXD91_RS05040 1019761 .. 1019771 +  -6.8  -3.91984   TCTGGTGCGCCTAGC                 CACG GCG CGTG                 TTGTTTCGGCAGTAT  66 27
CXD91_RS05045 NONE
CXD91_RS05050 1022065 .. 1022094 + -16.6  -5.00616   TTGGTGTTCTACCGG       CAAAGCCCCTTG CTTGTT CAAGGGGCTTTG        TTTTTTCGGGCCGGC 100 67
CXD91_RS05055 1022563 .. 1022577 +  -3.4  -3.56092   TACTTCCTACCGAGA               GCCCGC GCT GTGGAC               TTTGAACCCTGGTGG  49 59
        lapB NONE
       rfaE1 NONE
        rfaD 1025723 .. 1025747 +  -4.2  -3.40597   CTGAAGTAGCGGATT         TGC-CCCGGGT AATT GCCCGGGTGGA          TGTTTGCGTGCACCG  49 32
CXD91_RS05075 1026370 .. 1026380 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS05080 1027428 .. 1027450 + -14.1  -3.78934   GCCAGCGCGGCTAAA           CCGCCTCGG CCGAT CCGGGGCGG           TTATTATCGGCGGCA  83 69
        cysM 1028712 .. 1028761 +   -17  -3.01712   CCAGCGGCGCCGGAT CGGCCGGCAGCGCGACCGGCGCG AACAC CG-GCAGGCCGCGCTGCCAGCCA TGTTCGACCAGGAAG  82 361
CXD91_RS05095 1030544 .. 1030559 +  -7.5  -3.08006   ATTGTGCAATGCGGT              CCCGG GTTTCG CCGGG               TAATTATTGTTATTT  54 53
CXD91_RS05100 NONE
CXD91_RS05105 1032293 .. 1032312 + -16.4  -5.75945   CACGCAGAGAGAAAG            CCGCGGGC TGTC GCCCGCGG             TTTTTTTTCGGCCAT 100 52
CXD91_RS05110 NONE
CXD91_RS05115 1035081 .. 1035096 + -11.8  -5.86332   CCGCTTCGGCGAGAA              CGCCCC GCAA GGGGCG               TTTTTTTTGCCTTGG 100 46
CXD91_RS05120 1036354 .. 1036370 + -11.5   -3.5944   GCGCGGCGCCAGCGC              CCCGGCG TAT TGCCGGG              TTTCGGCATCTCGAT  72 95
        cysA 1039424 .. 1039457 +  -5.1  -2.71712   CCTCGGCGTGCTGGA     CGCGGTGGCCACGCGC TAC GGGCGCG-CCATCACG     GTTTACCGGCCCGAC  45 264
        cysD 1041196 .. 1041207 +  -3.6  -3.90048   GGCATCACCATCGAT                GTGG CCTA CCGC                 TATTTTTCGACACCC  59 330
CXD91_RS05155 1043708 .. 1043728 +  -4.5   -3.6215   GCCAGTGGTAGGGGG            CCGCGCCCG TCG CGGCAGTGG            TTTGACATGCATTCG  52 80
CXD91_RS05160 1044248 .. 1044263 +  -4.6  -4.62069   CCAGGCAGCCAGCCA              GTCGGC CTAT GCCTAC               TTTTTCCCGTAGCAG  75 86
CXD91_RS05170 1045809 .. 1045860 + -22.6  -2.87132   TTTGTGTCTGGCACG GCTTTCCGCAATAAAAGGGCACCC GCAA GGGTGTCCTTTTATTGCGAAAAGA TATCTGGAAGAAAGC 100 81
CXD91_RS05175 1046724 .. 1046741 + -14.1  -5.14563   ATTCCCGATCAGTAC             GGCGCGC CGTG GCGCGCC              TTTTTTCATCCCGGC 100 60
CXD91_RS05185 1049108 .. 1049126 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 244
CXD91_RS05205 1052959 .. 1052991 +  -3.4  -3.80733   AGCGGCCGCCGCCGG      CCCGGCGATT AACGCAAATTTAA AAACGCCGGG      TTATTCTGGCCTGCC  56 69
CXD91_RS05220 NONE
CXD91_RS05225 1059271 .. 1059301 + -25.6  -3.55444   CGCGGCCGTCCAAAA       CAGACAGGCCGGCA AGA TGCCGGCCTGTCTG       TTTGCGCAGTGGCGA 100 46
        aceE NONE
        aceF NONE
        lpdA 1072428 .. 1072451 + -18.2  -2.52464   CGCGGCATGGCAGCA          CAAGGGCCCC TCGC GGGGCCCTTG           TGCGTTGGCGCGGCG  85 45
         tkt NONE
         gap 1078922 .. 1078964 + -21.4  -4.07568   CTGAACAGGGCGCAA GGGCCAGGTTGGTTTTCCCG TCA CGGGGAAACGGATCTGGCCC TTTTCGCAGGCAGGC 100 51
         pgk 1080409 .. 1080424 +    -6  -3.01712   TCGAAGCCGGTGATG              CCCGAG GCGG CGCGGG               TCTTGAGCGGCCCGG  48 227
CXD91_RS05345 NONE
CXD91_RS05350 1090347 .. 1090363 +  -2.1  -3.01712   TCTCTTGCTACCCAT              GCCATGC GCA GCAAGCC              TATTGACGCGCCCGG  41 68
CXD91_RS05355 1091725 .. 1091759 +  -6.3  -3.64487   GCTGCAAGTCGGCGC    GCTCGCGCG-CCGGCA GGCC TTCCAGCCGCGCGACC     TTCTTGGCCGTGTCG  59 456
CXD91_RS05365 1093625 .. 1093650 +  -3.9   -4.7416   CGCCGCCCGGCAATA         GGGCGTGCGCTA TAG TGG-GCGCGCCG         TTTTTCAGATTTTCA  77 25
CXD91_RS05370 NONE
CXD91_RS05375 1095110 .. 1095120 +  -8.2  -3.02511   GCCGAGGCCGAACGC                 GCGC CGG GCGC                 TGTTCAGCCGGTCGG  55 264
CXD91_RS05390 1097111 .. 1097135 +  -7.8  -3.93369   TGGCACACGCGCGCC          TCGGTGACGT TGAGC ACGGCGCCGA          TTTCCTTGAGGTTCA  67 436
        flhD NONE
        flhC 1099129 .. 1099169 +  -4.6   -2.7386   AAAAGCACCAGAAAA CCCCCCATAACCCG-CG TTTTTGCC CGACGGGTCAGGGGGGA  TCATTGGCGTCGGTT  43 64
        motA NONE
        motB NONE
CXD91_RS05420 NONE
        cheA NONE
        cheW 1104053 .. 1104075 + -12.7  -3.90856   TGACGGCGGTCAGTC          CG-CGGGCGG TGCG CCGCCCGTCG           TTTCGTTCAACGCTT  82 38
CXD91_RS05435 1106136 .. 1106171 +  -7.5  -2.82516   ACTTTCCCATCCTGG    CCGATTTC-GCGCGCC AGCGC GGCGGGCCGGTATCGG    TGTGGTGCTGCGCCG  52 341
CXD91_RS05445 1107730 .. 1107769 +  -2.1  -4.43909   CGACCGCGGGCATCG CGTTT-GACGCCCCGGTCC CAAC GGAGCGG-GCGTCCGGACA  TTATTTTCTTGGAGT  67 19
        cheY NONE
        cheZ 1109000 .. 1109018 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 206
CXD91_RS05480 1111979 .. 1112002 +  -6.6  -3.68351   TGATGCCGGTGTTGG          TGGCG-GCCAC CAT GGGGCGCGCCG          TTTCCATGGTGCGCA  61 231
        dacB NONE
CXD91_RS05550 1127621 .. 1127635 + -11.4  -6.34424   CCGCCCACAGGAAAA               CCGCCT TGC AGGCGG               TTTTTTTTTTGCCGC 100 59
CXD91_RS05555 1128991 .. 1129015 +  -3.4  -3.34398   CCCTGGCCTGCGGGG         CGGGACCGGGC ACAG GACCGG-CGCG          TGTTTCGCGCACGAC  46 77
CXD91_RS05560 1132036 .. 1132050 +  -2.7   -4.2679   GCGAGGAGGGTCTAT               CCCCC GCGGA GGAGG               TTTTCCTGGAGCTTG  63 42
CXD91_RS05570 1134484 .. 1134527 +  -8.6  -2.66316   GATTACGCAATTGAA GTAGCACCCCGTAGCACGCG GGGG TGCGTGGCGCGGGGCGCGGC TGGTATGATGAACGC  52 22
CXD91_RS05575 1134882 .. 1134934 +  -7.4  -3.66999   GCCTGCTGATCAGCC GCCGCTGATCACGGCGGGGCGGGC CGCGC GTCCGCCCCGGCATGCACAATGGG TTTGCGTAGATCGGT  63 18
CXD91_RS05580 NONE
CXD91_RS05585 1135825 .. 1135846 +    -5   -3.7282   GGGCGTGCCCCATTC           GCGGCTGG TTTCGC CCGGCCAC            TTGTTGGTGGCGTCC  58 146
CXD91_RS05595 1138602 .. 1138622 +  -3.1   -4.4017   CCAGCGTGGGCGCGC            AGATCGCCA GGC TGGCGGCCA            TTTTCTCGACCTTGG  68 422
CXD91_RS05615 1142977 .. 1142991 +  -3.4  -2.62184   GGCGGCTGTGGGCCT               CGCTGG AGA CCGGCA               TGGTGTACCGGGCCG  39 283
CXD91_RS05625 1144586 .. 1144620 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 221
         ppx 1153642 .. 1153676 + -21.4  -2.52464   CCTGAAACCCGATCT     CCGGGAGCCTGTCCCC GAA GGGGACTGGCTCCCGC     TGACTTCCGGGGAGC 100 36
CXD91_RS05695 1160479 .. 1160504 + -10.3  -3.53012   GCGATAGTACTTGAT         CTGGCCGGCCT GGAC GGGCCCGCCGG          TTTCAGGCGGGCCGC  67 34
CXD91_RS05700 1161966 .. 1161980 +  -5.6  -3.02144   CCGACGCGCAGGGCA               TGAGCC TGG GGCCCA               TGTTGCGCGGCCTGG  47 419
        dusA 1165524 .. 1165558 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS05745 NONE
CXD91_RS05750 1170052 .. 1170062 +  -3.2   -3.7614   GACTGGGCAGCTGGG                 CTGG AAG TCAG                 TTGTTCGTCCTGATT  56 2
CXD91_RS05755 1171093 .. 1171124 +  -9.4  -3.03243   CCAGTCCGCTGCCGG      GCGTTTCGCGGTGGG CGG CCCGCCG-GTAATGC      TCTTCGAAGATCCGT  55 174
CXD91_RS05765 NONE
CXD91_RS05770 1175919 .. 1175941 +  -5.5  -3.72324   CGCCGGCTGGCGGCG          CA-GGCGGCC TGAT GGACGCCCTG           TTCTTCCTGGAGGTG  57 14
CXD91_RS05775 1177022 .. 1177041 +  -6.4  -3.73775   GGCTATACCGGGCTG            GTCAGCCTG GGG CAGGC-GGC            TTTCATGGGCCTGGG  59 239
CXD91_RS05785 NONE
CXD91_RS05790 1179629 .. 1179643 +  -3.5  -2.78384   TCAAGCACTACAAGC              GCC-GC AAGC GCTGGC               TGTCATGACGCGCGC  41 3
CXD91_RS05795 1181538 .. 1181559 +  -2.9  -3.12351   GCAGGCAGGTGGCGG           TG-CGTACCG GCG CGGTCCGGCG           TTGCGTATCCAGCGC  44 50
CXD91_RS05800 1182703 .. 1182740 +  -7.6  -2.73364   CGAGCGCGCGGATGT   AGTCGGCGTCGAAGTA CATGGC TTCTTCGTCGCCGGCG    TCCTTGGCCTCGACC  49 504
CXD91_RS05835 NONE
        lolD NONE
CXD91_RS05845 1191580 .. 1191611 +  -4.2  -3.78775   CAGGGCGGCGACGCC      CTGACGCCCGGCCGT CCG GCG-CCGGGCCCCTG      TTTCCTCCTGCCCGC  57 22
CXD91_RS05850 1195179 .. 1195203 + -12.8  -6.34424   TCCGCCCGTTGTTGG          CCGCCTGTCG TGTAT CGACTGGCGG          TTTTTTTTTTGCCGC 100 109
CXD91_RS05855 1195702 .. 1195720 +  -3.8  -3.60762   GTAGGCGAAATCCTC             GTCAAGTC AGC GACTTCGC             CTTTTTTGGCCACTC  51 187
CXD91_RS05860 1199768 .. 1199796 +  -9.4  -2.87132   ACTAAGCGCCGTAAG        ACGGGGGGCGCC GATGG GGCGCCTCCCAC        TGTCTGGCGAGCAGG  56 36
CXD91_RS05870 NONE
CXD91_RS05875 1204449 .. 1204463 +  -2.7  -3.02263   CGGAGCGCGGCGAAG               CCGCG CTACC CGAGG               TCTTGCAGGACCTCT  42 53
CXD91_RS05880 1205354 .. 1205377 +    -8  -3.09015   CGCGCCTTTCGCGCC          GGGCCGTTGG CGCC CCGGCTGCCC           TTGAATCCCTATGCA  54 43
        greB 1206174 .. 1206208 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 241
CXD91_RS05915 1213588 .. 1213606 +  -5.2  -4.42081   CAGGCAGGGAAGCGG             GCCGCAGT AAA ATTGCGGG             TTTTCCCTTTATGTT  72 16
CXD91_RS05925 NONE
        odhB 1220171 .. 1220227 + -12.9  -3.74693   GAAGAATGCCTTCTT CTGTCGCTGCCGCCAAGGGCCGGGCCGC CATC GCGGCCC-GCCC--GGCGGCCCTGCCGG TTTCGTCGAATCCGG  79 58
        lpdA NONE
        zapE 1223073 .. 1223089 +  -3.5  -3.14132   TCGGAAGCCAGGAAG              GCCACCG TGG CGGCGAC              TTCCTCCGGCAGGCC  45 114
CXD91_RS05950 1224911 .. 1224945 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS05985 1230458 .. 1230486 + -19.6  -2.53876   CGGGGCAACGACGCA       GGCGCCGCACCCG ATGA CGGG-GCGGCGCC        TGCGTTGCGATCAGC  93 67
CXD91_RS05995 1235131 .. 1235149 + -11.6  -3.91911   CCGCGCAAAAGGAAA             ACCCGGCC TGG GGCCGGGC             TTTCCTTGGACTGCG  81 44
CXD91_RS06005 NONE
        pgeF NONE
        phaC 1239534 .. 1239553 +  -4.8  -3.61894   CGGTTTGAGTACGCG            CGCGGGCC GCAA GGCCGGCA             TTCTTGGCGGGCGTT  52 33
        phbB 1240350 .. 1240378 +  -9.6  -3.04263   CGCATTCGGAGGGGG       CCGGG-GTCCG GGGGGAAG CGGACGCCCGG        TATTACACGTAAAAT  57 44
        phaR 1241036 .. 1241055 + -16.4  -4.24204   CTGGCTGAAGGAAAA            GGGGCGCC CACG GGCGCCCC             TTTTCCGTATGAGTC 100 52
CXD91_RS06030 NONE
CXD91_RS06035 NONE
CXD91_RS06040 NONE
CXD91_RS06045 1244350 .. 1244364 +    -7  -2.79183   CATCTGGTAGCGCGG               CCACGC GCG GCGCGG               TATGGTGGCGGTCCC  48 31
CXD91_RS06050 1245338 .. 1245348 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS06055 1246442 .. 1246464 + -11.9  -2.50816   GTAGCCCGGCCCATA           GCGCGCCCG CGGTC CCGGCGCGC           CTTCGTCGCTGCCGC  58 115
CXD91_RS06080 NONE
CXD91_RS06085 1251765 .. 1251783 +    -3  -3.58396   GCAGGCATTGCCATA             CGCACTGG GCA CGAGTGGG             ATTTTTAATTTCACG  49 56
CXD91_RS06090 1253451 .. 1253467 +  -6.5  -3.39895   CGCGGAACCAACATG              CCGGC CCACAAA GCCGG              TTCATTGCTACACCG  55 167
CXD91_RS06095 NONE
CXD91_RS06100 NONE
CXD91_RS06110 1258122 .. 1258134 +  -3.3  -3.35679   GGCGAACGGCTCGAC                CACCA GAT TGGGG                TTGTCGATGGGCAGC  47 465
CXD91_RS06120 NONE
CXD91_RS06125 NONE
CXD91_RS06130 1261248 .. 1261283 +    -9  -3.14132   GCACGACGGCCAGCG   CTGAGCCGG-CCGGCG CGCCTA CGCCGGGCCAGC-CAG    TTCGTCGGCCAGCGC  59 22
CXD91_RS06140 1263594 .. 1263611 +  -5.5  -3.34398   AGACGCTGCCTGTAA             GCCGC CGACCGTT GCGGC              TATTTGGCCGCGCCG  51 86
CXD91_RS06155 1266169 .. 1266208 +  -9.4   -3.5361   CCTGGGCGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD91_RS06160 1267235 .. 1267275 + -16.2  -2.71011   TATTGACAGTTCACA  GCTAGCGCGGCGCTAT CCGCATACC ATAGCGCCGCGCCGGC  TCGTTGCCAAGGCAT  77 21
CXD91_RS06205 1275118 .. 1275164 +  -5.1  -2.97188   GCTCGCGCGCATCCC TGGCG-GATGCGCGGGC-CGG ACCGGCC TCGAGCCTGCGTGGCGCGCCA TGTCTCGTCCTGTCC  47 111
CXD91_RS06210 1276054 .. 1276100 +  -5.1  -3.29461   GGATCGGCGCGGCCG CCCT-GGATGCG-CAGGCATAGC GCC GCGGCGCATGGCGTATCCTAGGG TTATGCAAAGACTTC  51 6
CXD91_RS06215 1276351 .. 1276392 +  -4.3  -4.08216   TGCTCGGCCAACGGG CCG-CTGGGCAGGGTGCCGT CTT GCGACATCATGGTCAGCCGG TTTTCGCCGACCTGG  60 73
CXD91_RS06225 NONE
CXD91_RS06230 1278397 .. 1278437 +  -6.6  -2.78596   CCGGGCTACCATAGG CGCAGCCATCCGGCGGCCG CCAT CGGCCGCCCGGCG-CACCG  TATCGTCACGAGGTA  47 111
CXD91_RS06235 NONE
CXD91_RS06240 1279037 .. 1279060 +    -3  -4.07568   CTGACCTTCTGCGCC          GCGCCGGC GATGGTAA GCTGGCTC           TTTTCCGCGCGGCCG  59 37
CXD91_RS06245 NONE
CXD91_RS06250 1280282 .. 1280311 +  -7.7  -3.21395   GCCCCCGCGCCAGCC       GC-GTGGCGCCTTG CGC CTCGGCGCCGCAGC       TCTTGTCCAGCAGCT  53 277
        clpB 1284922 .. 1284945 + -13.2  -5.48063   CGCCGCGTCTCTCAA          CCCCTGGATCC AAT GGA-CCAGGGG          TTTTTTCTGTTCGCT 100 69
CXD91_RS06275 1286683 .. 1286712 +  -4.9  -3.05384   CGGCGATCGCGTGAT       CAGC-GGGATCCTG CAG CAGGACCTCGGCAG       TTGGCTGGCGCCGGA  45 123
CXD91_RS06285 1290762 .. 1290795 +   -11  -2.68942   GCTTGAGGGTGTCGA     CGCGATGC-CCGCGC ACCAG GCGCGGCGTATCGGG     GTTCTGTCCGGCGCT  59 388
CXD91_RS06295 NONE
CXD91_RS06300 NONE
CXD91_RS06305 1293939 .. 1293971 +  -9.7  -3.05463   GTCAGGCGCGGCTGT      TGCGGCCGGCGGG GCGGCAG CCCGCCGGCAGGG      TTGCCTGCCGCACAT  57 47
CXD91_RS06315 1296423 .. 1296444 +  -8.6  -5.47218   GGCCAGGTGCTGCGC           GCCGGCGC CTGAGC GCGCCTGC            TTTTTTTCCCTACGC 100 14
CXD91_RS06320 1297793 .. 1297808 +  -7.5  -3.14132   GTTGCGCCCGTGGCC              GGCGC TGCGGC GCGCC               TTGATGAGGGCGCGC  53 377
CXD91_RS06350 NONE
CXD91_RS06355 1303782 .. 1303793 +  -7.2  -4.15565   ACATGTTTCGTGGGC                CCGC CTGG GCGG                 TTTTACGGTACTCAA  67 77
CXD91_RS06360 NONE
        crcB 1304753 .. 1304795 + -13.2   -3.6502   GGCTGGGGCTGGCGA CCGTGCGCCTGCTGTTGCGC TGA GCCCGGCGGCGGGCGCCAGG TTTCAGTCCGGCGTG  79 3
         alr 1309091 .. 1309114 +    -8  -2.56596   GAGCATTGTGCGGAT          CGCCGGCGGG CCGG CCTGCTGGCA           TGAATTGCTACGCAA  50 39
CXD91_RS06390 1310135 .. 1310157 +  -5.5  -4.45399   AGGCCGGATCGTCAC          GCTGGC-GCG CTGA CGCCGCCAGA           TTTTCCTGTTGCTGT  72 215
CXD91_RS06400 1311895 .. 1311941 + -12.9  -2.73875   GCTCGATGGCCAGTT GCAGCCGGCGGCGCTGCTG GAACTCGGA TAGCCGCGCCTCGGGCTGC TCGTGTTCGGCGGCG  63 213
        radA 1315572 .. 1315582 +  -4.6  -3.13299   CGTTGATGGCACGTC                 CGGG GAG CCTG                 TCTTGAGTCTGCTGG  47 35
CXD91_RS06420 1316452 .. 1316472 +  -6.7  -3.58905   CAACGAATTATAGGT            CACGCGGCA TTT TGCCGCGCC            TTGTATGTGCGGGCT  58 119
CXD91_RS06425 1317014 .. 1317035 +  -2.1  -3.53012   CATCCTCCCAGCAGG           CCGACGCCGC CCA GCGCCA-CGG           TTTGCAGCACCAGCG  47 295
CXD91_RS06460 NONE
CXD91_RS06465 NONE
        maiA 1324992 .. 1325013 + -17.3  -5.67063   GCGCCCAAGCAAAAA           GGGCAGCCC GGAT GGGCTGCCC            TTTTTTTCTGGTGCC 100 45
CXD91_RS06480 1325397 .. 1325418 + -12.3  -5.09762   CGTCGACACAAAAGG           GCCGTTCAC GCAA GTGAGCGGC            TTTTTGTATTGCGCT 100 77
CXD91_RS06490 1327402 .. 1327422 +  -6.7  -4.14392   TGGGCGACGATCACG            GTCACGGGC GCG GCCAGTGTC            TTTTCCAGGTTGCCG  69 417
CXD91_RS06500 1328735 .. 1328761 + -12.2  -3.85698   ATCAAGACATTACAG         CCGGCCTGGCGT GCG ACGCCAAACCGG         TTTGTCCGGGCGGCC  81 92
        scpB NONE
CXD91_RS06515 1332920 .. 1332939 +  -9.3     -6.13   GGCCAGGCAATACGG            TGGGCTG GGCGTG CAGCCCA             TTTTTTTTTGAGTGT 100 453
        rimP NONE
        nusA NONE
CXD91_RS06530 NONE
        rbfA 1338420 .. 1338449 +    -5  -2.60341   TGTTCCCGACGAGCC       CGAAGACCAGTCC TGACC GGGCTG-TCGTCG       CTGCTTTTTCTCCTT  42 10
        truB NONE
        typA 1341092 .. 1341118 + -22.4  -4.65895   GCGGTGCCAGCGCAA         GGGTTGTGGCCG TGG CGGCCACAACCC         TTTTTACATGCAGCC 100 66
        polA 1345803 .. 1345828 + -17.5  -2.69151   GCGCACTGATGCGGC         CCCGGCCGGCG TCCG CGCCGGCCGGA          TACTGTCTGACAGCC  80 32
CXD91_RS06570 NONE
CXD91_RS06575 1347594 .. 1347619 + -21.9  -2.52676   ACCTGTAGCGGGCCG         GGGCCTGCCCG TGCT CGGGCAGGCCC          TCAGTTGCCCGCGTC 100 33
CXD91_RS06585 1350932 .. 1350983 +  -7.2   -4.8048   ACAGGCACGCCGGGG TTGGAGTTTGCGGGTGCCAGTCCCC TGC GGGGACAGGCACCCG-GGGTTAGAG TTTTTCCTCTACCCC  84 117
CXD91_RS06615 NONE
CXD91_RS06620 NONE
        parC 1365139 .. 1365154 +  -8.2  -3.22475   GTGCGTCCCAGGCAG              CCGGTG CTGT CGCCGG               TGTTCTGAGCGTGAA  58 2
CXD91_RS06630 1366545 .. 1366579 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS06655 1370201 .. 1370229 +  -8.7  -3.29144   TGACCAGCAGGTTGG        CGCCCGTGTCGTG CAG CACCACCCGGCCG        TTCTCCAGCACGTAG  59 157
        ugpB 1379374 .. 1379404 + -21.1  -3.18118   TTGGCCTGTGCCTGT       AGCGGCCGGCCGG CATTA CCGGCCGGCCGCC       TGTATTCTCACCTGG 100 145
        ugpA NONE
        ugpE NONE
CXD91_RS06720 1382401 .. 1382434 + -17.3  -3.44325   GCCGCAGCGGGGACA     GGCGCCCGTGCGCGG CGAG CCGCGCGCATGCGCC      TTACTTGTACGACGT  87 102
CXD91_RS06730 1384443 .. 1384453 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS06735 1385623 .. 1385663 +  -3.1  -3.06261   ACAGAAGATGCCCAC CGCGACGCAGGCGATGCCG ACCAG CGGCGAGGCG-GCG-CGCG TGTTCGCGGTTGCGA  42 191
CXD91_RS06750 NONE
CXD91_RS06755 1387276 .. 1387334 +  -2.9  -4.56597   CCCGCGGCAGCCTGA TCCCCTTGCCGGGCGCAGGGCTAC-CGGC CCG GCCGCGCGGCCC-GTGCGGCACAATGGGA TTTTTGGCGCAAGGC  69 76
CXD91_RS06760 1388216 .. 1388248 +  -9.7  -3.06671   GCAGCCCGGGCGCCA      TGGCGGTGCAGCGCG TCA CGCCCAGCATGGCCA      TGTTGCGGTCGATCT  59 67
CXD91_RS06820 1397957 .. 1397985 + -10.1   -2.9348   GACGCGCAGCACGGC        GGCTAGGGCGCGG CGA CCGCGCCACACCC        TATGTAAAATTTACA  59 20
CXD91_RS06825 NONE
        arsC 1400045 .. 1400076 + -24.5  -3.90112   TGAGGGCGAGTGATT      GCGGCCTGGCGCG GCAAGA CGCGCCAGGCCGC       TTTCGTTGACGGCCG 100 70
CXD91_RS06865 1405286 .. 1405317 +   -10  -2.81547   GGGCCAGCGGCAACA      GGCGCTGCGCGGCC TGGC GGTCGTCCAGCGCA       TAGTTGATCTGCAGG  56 306
CXD91_RS06895 NONE
CXD91_RS06900 1410853 .. 1410896 +  -8.3  -2.51133   CTGCACGTGATGCAG GCGGTCGAGG--CGCAG-TCCA GCG TGGAGCTGCTCACCTCGATCGC GTTCGTGGATGACTC  51 258
CXD91_RS06945 1430796 .. 1430853 +  -7.7  -3.07113   CTGTCGTCCACATAG CGCAG-CGCGG-C-GGGCGCCGCGGGGCT CACG AGCGGCGC-GCGCCCTGGCCCCGGTTGCG TTGGCTGGACTGATC  53 66
CXD91_RS06970 1435187 .. 1435210 +  -8.8  -3.53012   CGGCGAACAGCCGCC          GCAGCTGGCGC CCT GCGCCATC-GC          TTTGCGGCGCCGGGC  61 350
CXD91_RS06995 1438252 .. 1438284 + -12.7  -2.73875   CGCCTGGCGCGGCGC     GGCCGGTCCTGCCC GAACTG GGGCCGGAC-GGCC      TGGTGTTCGCCGAGG  65 244
CXD91_RS07005 1441849 .. 1441881 + -10.5  -3.05963   TGTCGACCGTGCCCA     CGC-GCGCGCCGTC GGGCAG GGCGGCGCGCAGGG      TATTGACCTGCACGT  59 285
CXD91_RS07020 NONE
CXD91_RS07025 1447800 .. 1447815 +  -4.6  -3.41051   GAGATCGGCAATGGC              CTGGTG GAAG CGCCGG               TTCTCGTCGAAGTAG  52 291
CXD91_RS07035 NONE
CXD91_RS07040 NONE
CXD91_RS07045 1452288 .. 1452300 +  -3.3  -2.64243   AGCCCCGCAGGAGCC                GCGTC CAT GAAGC                TGCTGTCGCATATCC  39 16
CXD91_RS07050 NONE
CXD91_RS07055 1454848 .. 1454872 + -13.5  -3.21416   CGGCGGGCCGACGGC          GGTCAGGCTGG CGT CCAGCCCGGCC          TTGCTCATGGCGCTG  72 427
CXD91_RS07075 NONE
CXD91_RS07080 NONE
CXD91_RS07085 1460819 .. 1460855 +  -9.4  -3.02511   GAAGTAGCCCGTCGC   CGG-CGCTGGCTGTCCC TGCG GGGACAGATACCGTCCG    TCTTGGCCGGCTACC  57 34
        flhB 1467114 .. 1467153 +  -3.5  -3.67296   GGTGATGATCCTGCT  GGTGGCGATGTTCACGCG CAAGC CGC-TGGATTTCGCCGCG  TTTCCCTCGGTGCTG  54 199
        flgB NONE
        flgC NONE
        flgD NONE
CXD91_RS07160 NONE
CXD91_RS07165 1477143 .. 1477173 +  -2.2  -4.32034   CGGCCAGCTGATTAT       CAACGCGCGCGCCG AAG CGCCGCGCCAGGAG       TTTTCATCATGATGC  65 30
        flgG NONE
CXD91_RS07175 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 1484146 .. 1484171 +   -14  -3.05384   GTAGTCGGGAAATGG         CGCGCGCTCC CCTCGA GGAGCGCGTG          TTCGATGGAAAGCGG  72 57
CXD91_RS07200 1486037 .. 1486048 +  -2.2  -3.68853   GGGCGAAATGGCGGC                CGGA TAGT TCTG                 TTTGGCGGTTTTTGC  51 49
CXD91_RS07205 1487820 .. 1487855 + -22.6  -4.56597   CCAGGACGGGAAAGC    GGCGATCCGCCGCGGC CAGC GCCGCGCCGGATCGTC     TTTTTACAGGCAGCG 100 92
CXD91_RS07210 1489396 .. 1489411 +  -4.6  -3.78419   CGTCGGGTGCCGTCG              GGTGCC GCTG GGTGCC               TTGTATCTTTCCTCC  58 47
CXD91_RS07215 1490627 .. 1490653 +  -2.9  -3.90744   CAAGACGGTATCTGT        CCCC-GCGGG GACAGGCA CCCGAAGGGG         TTATTTGCCCGCCAG  58 45
        fliE 1503979 .. 1504000 +  -7.2  -2.88544   CCAGCAGCTCGGCCA           CCGCCGTG TAGAGT TGCGGCGG            TATATGGGCATCCAG  50 518
CXD91_RS07340 NONE
CXD91_RS07345 1510675 .. 1510691 +  -3.5  -3.31415   GACAACGGTTTCATC              GCCGCAC AGT GACCGGC              TTCGATTTCGTCGTC  47 14
CXD91_RS07350 NONE
CXD91_RS07355 NONE
        rpsB NONE
CXD91_RS07385 1520058 .. 1520092 + -13.5  -3.83144   ACGCGTCATCGTAGG    GGCCGGCCAGGGCGGG GCTT CCCGAACT-GCCGGCC     TATTTCTTGTCTTAC  83 40
CXD91_RS07390 NONE
CXD91_RS07395 1521433 .. 1521484 + -10.8  -3.10344   ATCATGACCGTATAA TTCCGGTTGAGGTATCGGGGCCGT ATCG ACGGCTCCGGTGTCGATATCGGAA TCTGTTCCGTACGCG  64 26
        uppS NONE
CXD91_RS07405 NONE
CXD91_RS07410 1524422 .. 1524450 + -10.1  -3.59979   TCATTCGCCGGCAAT        CTCGGCCTGGCGT GAC GCGCCGGGCCGCC        TTTCGCGTCCACCCG  67 11
        rseP NONE
        bamA 1528239 .. 1528272 +  -2.9  -3.72893   GTTACGCATGAAAAC     ATGGGAAATGGCCGG TTGC CCGGCCGTCCCGCAG      TTTAGTGGCACAATA  53 65
CXD91_RS07425 1528892 .. 1528902 +  -2.4  -2.64218   CTGGGCCGATAAGCA                 CGCC CAT GCCG                 GTTCTGCTGGACCCT  38 29
        lpxD NONE
        fabZ NONE
CXD91_RS07440 NONE
CXD91_RS07445 NONE
CXD91_RS07450 NONE
CXD91_RS07455 NONE
CXD91_RS07465 1537235 .. 1537255 +   -14  -5.40072   CGGCAGCAGGAAAAA            GCCTCGCC CTTGC GGCGAGGC            TTTTTTTCGCCGGGC 100 46
CXD91_RS07475 1538561 .. 1538580 + -10.6  -3.09015   CGTAACCATGACCTT            GCCCGCCG GCGA CGGCAGGC             TTCACTAGCTGTGAA  64 36
CXD91_RS07485 1540590 .. 1540613 + -17.4  -3.59979   CGTGAGGTTCGACCC          GGGCGCGCCG GCCG CGGCGCGTCC           TTTCGCGTCCGCGCC  89 36
CXD91_RS07490 1541807 .. 1541827 +  -9.7  -3.67622   GCGCTGGTTGACGCG            CGTGTCGTG CTT CAGGACACG            TTCCTTTTCGCGCTG  68 30
CXD91_RS07500 NONE
CXD91_RS07505 NONE
CXD91_RS07510 1544243 .. 1544256 +  -2.4  -2.62616   CTCGCCAACGACTTA               CGTT TACGTT AACG                TCATGTCGAGCGTCC  38 129
CXD91_RS07515 NONE
CXD91_RS07520 NONE
        mmsB 1547625 .. 1547641 +  -4.3  -3.08464   GGCCGGGCGGCCAGG              GCCATTC CGC GAGAGGC              TTGCATGCCTGATAC  47 50
CXD91_RS07530 1548070 .. 1548097 +  -6.8  -2.90075   TGACCGCGGTGCGGG        TGACGCCGCGTT GAAC GGCGCGGCGGCC         TATACTTGGCGCGCC  50 12
CXD91_RS07535 1549011 .. 1549045 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 204
CXD91_RS07560 NONE
CXD91_RS07565 1556558 .. 1556585 + -14.2  -6.15828   GCCTCGAACGTCCGC        CCCATCCACGGCG CCA TGCCG-GGATGGG        TTTTTTTTTGGTGCC 100 47
CXD91_RS07595 1563196 .. 1563206 +  -4.6  -3.07113   ACTCGCGAATAGGGG                 GCTC AGT GGGC                 TTGGATGACCTGGTG  45 156
CXD91_RS07600 1563507 .. 1563517 +  -2.6  -3.57144   CAGCGCTTGCAGATG                 TAAT CCG ATTA                 TTTCCAGGTGGCGCG  48 23
CXD91_RS07605 1564579 .. 1564598 +   -10  -4.07568   CGGCAGTGTCATAAT            CGGGGTTG ACCG TAACCCCG             TTTTCGCGCGAAGCC  78 27
CXD91_RS07610 NONE
CXD91_RS07615 1566549 .. 1566597 +  -8.6  -2.62184   GCCAGGCCGCCAAAT AGGCCGCGCGTTCAGGCCGGGCT GACG GGCGCGGCCAG-GCGCGCGATCG TGGTGTCCAGCGGCC  52 24
        apbC NONE
CXD91_RS07640 NONE
CXD91_RS07645 NONE
CXD91_RS07650 NONE
CXD91_RS07655 1574295 .. 1574312 +  -8.4  -3.29829   TGCTGCATGCGGGCA             CCGCAC CATGGC GTGCGG              TTGTCGGAAGCTATA  58 88
CXD91_RS07660 1574594 .. 1574608 +  -5.6  -3.13403   ACCACCCTCGTTTGA               TACCGG AGC CCGGCA               TGTTGCTGACCAAGA  49 26
CXD91_RS07665 1578074 .. 1578096 +  -3.2  -3.01712   GGCGCTGCTGGCCGG           CGACGGCGAC GTG GTGGCCGACA           TCTTCCGCACCCGCG  42 522
CXD91_RS07675 NONE
CXD91_RS07680 NONE
CXD91_RS07685 1580020 .. 1580070 + -10.2  -3.61398   GCCAGTAGCCCGGGC GGCAAGCCGCGCGGCGTCCGGCC GCCTCA GGCCGGGCGC-GTGCGCCGGACC TTCTTGCGCGCGAAA  67 33
CXD91_RS07700 NONE
CXD91_RS07705 1583676 .. 1583696 + -16.9  -4.07687   AGCACGAAATCCAAA            GGCCACGAG ACA CTCGTGGCC            TTTTGCACGGGGCGT 100 121
        leuC NONE
        leuD 1585945 .. 1585981 + -18.6  -3.37556   TGACGCGTTGCCTGC    CGGCCCGCCGTCCGCG TTGAT CGCGCGCGGCGGGCCC    TTGCCTTGTTTTCCC  93 38
        leuB 1587138 .. 1587154 + -10.1  -4.58685   CCACTGTGCGCAAGG              GCCGCGA TTT TTGCGGC              TTTTTCGCACAATTT  93 73
         asd 1588418 .. 1588474 + -11.8  -4.07568   CCTGACGCGCGGCGC CGGCGCGCATGGCAGGATACAAGGGCGCC CGCG GGCGCCCTTG--T-C-GC-AGGCGCGCCG TTTTCGACGGCAAGG  82 36
CXD91_RS07730 NONE
        truA 1591082 .. 1591094 +  -4.7  -3.61398   TTTACGCAAACGGTC                CGCGC TCA GCGCA                TTCTTCCACACCCAG  52 130
CXD91_RS07740 1592205 .. 1592221 +  -6.5  -3.53012   ATGGCGACGGTGGCG              CGGGG CAAATAA CCCCG              TTTCGACGCGACGCG  56 14
CXD91_RS07745 NONE
CXD91_RS07750 NONE
CXD91_RS07755 NONE
CXD91_RS07760 1595546 .. 1595566 + -15.5   -5.1101   TATCGAAACGGAAAA            CGCCAAGTC GCT GACTTGGCG            TTTTTTGCCTGATCG 100 62
CXD91_RS07765 NONE
        yaaA 1597629 .. 1597666 +  -3.4  -4.21812   CGCAAGCAGGCCTGA  CAGGACG-CGCG-ATGTC GGCA GGCTTACGCGTCTTCCTG   TTCTTTTCGCTCGGC  63 26
CXD91_RS07775 1599345 .. 1599359 +    -7  -3.72576   CGGCGTCGGCGCGCT               CGCCGG TCT CGGGCG               TTTCCTCGCCCGCCG  61 489
CXD91_RS07800 1603539 .. 1603566 +  -7.6  -3.88291   GGATTGAGATCAACT        CGGGTCGGATCG CGTA CAATGCGGCCCG         TTTCTAGGAGTCATC  66 34
CXD91_RS07805 NONE
        plsX 1604859 .. 1604875 +  -4.4  -3.14211   GCCGTCGCGCCCGGC             GCGGCTG GGGA CA-CCGC              TTGATGGAAAAAGCT  47 5
CXD91_RS07815 1605865 .. 1605912 + -11.9  -2.50816   GCTGGCCCGCATGTA GGCGGAAGGGCGCGCTGCGCGCG CCTG TGCGCG-ACCGCGCACG-CCGCC ATTCCTCCATACCGA  61 25
        fabD NONE
        fabG 1607644 .. 1607677 + -12.3  -4.03234   TGCAATAGTGAGAAG     CGCGCGGCGCGGC CCATCCAA GCCCAGCCGCGCG      TTTCTGTGGAAACGC  83 33
CXD91_RS07830 1608105 .. 1608125 +  -4.5  -3.55563   TCGAACACTTCGGGG            CGGCGCCGG GAA TCGGGGCGG            TTTCAGGAATGCCGT  52 72
        fabF 1609461 .. 1609495 +  -6.5  -3.69216   CCAACGGTTCGATGG    CCGTTCGT-CGGGTTTG AGT TGAACCCGGACG-GCGG    TATTTTCGATAACCG  59 9
CXD91_RS07840 NONE
        rpoE NONE
CXD91_RS07850 1611083 .. 1611096 +  -2.3  -3.54408   GACGCCGGAGCAGGA               CGTTG ATGA CACCG                TTGCTTTACATGCGC  48 20
CXD91_RS07855 NONE
CXD91_RS07860 1613708 .. 1613732 + -22.9  -4.65895   GGCTGGTTGCCGCAA          CGAGGGGGCGC ATG GCGCCCCCTCG          TTTTTGGCTCGCCCG 100 62
CXD91_RS07865 NONE
        lepB 1616480 .. 1616493 +  -3.7  -3.17392   ACTTCAGCGATTTGA               GCCGC ATTG GCCGC                TTCCATTGACCGCTA  45 3
CXD91_RS07875 NONE
CXD91_RS07880 NONE
        recO NONE
CXD91_RS07890 1619808 .. 1619834 + -15.9  -3.14344   GATGCCCAGCGCGCC        CAGCGCCGCGCG GGCC CGCGCGGC-CTG         TTCGTCCGCGACATC  80 157
        lptF 1628486 .. 1628511 +  -6.1  -3.01791   GTACTGGGCGATGAC         GCT-GGTGCTGC GCA GCACCACCTGGC         TGTTGGGCAGCACGT  48 280
CXD91_RS07945 1630604 .. 1630617 +  -2.3  -3.14132   GAGGAGCAGAGAAAT               GAGCG AAGT CGCTA                TTGATCGGCGGCAAG  42 124
        mmsA 1632157 .. 1632180 +  -8.2  -3.15544   CTATATTACTTATAA          TTGGCTCC-GT CTA ACAGGGGCCAA          TTCATGAACCTGCAG  56 98
CXD91_RS07955 1633303 .. 1633337 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS07965 1634786 .. 1634803 + -14.1  -4.41895   GAGGCCCAAGCAAAA             GCGCCCC GGAC GGGGCGC              TTTTGCTTGGGCCTT 100 77
CXD91_RS07980 1638295 .. 1638341 + -21.5  -2.62184   CATCATGCTGACCAT GCCGACGCTGGGCG-CGCGCGC CGAT GCGCGCGCCGGCAAGCGCCGGC TGCTCTACACCAGCA 100 294
         acs 1641628 .. 1641658 + -14.7  -4.17089   CGTCAGTCTGTAGCC      AGC-CGGGCCGGTC GCAT GACCGGCCCGTGCC       TTTTCCGGCTTTGCA  95 101
CXD91_RS07995 NONE
CXD91_RS08000 1643614 .. 1643639 +   -14  -3.28712   GGTACGCGGGCATTG         CGCGGCCGCGC GCTGA GCGCGGC-GCG         TTCTCAGCCGCCCGC  75 10
CXD91_RS08025 1648748 .. 1648787 + -14.2  -3.62597   GCCGCAGGGCACGCT  GGCCGAGAAGCTGCGCGCC GGC GGCGC-CGGCATTCCGGCC  TTCTTCACGCGTACC  80 439
CXD91_RS08035 1649827 .. 1649844 + -14.1  -5.75945   TTTTTGTATGTAAGG             CGCCGGC GTTA GCCGGCG              TTTTTTTTCGCCCAT 100 51
CXD91_RS08040 NONE
CXD91_RS08045 NONE
CXD91_RS08050 1653834 .. 1653857 +  -2.3  -4.71426   GCGGCGCGTATTGAA          CGCGGT-GGC TTGGC GCCTGCCGCA          TTTTCTTCCTCAACC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 1657348 .. 1657405 + -13.4  -3.48276   AGACCGCAAGTAGGG CAGGGCGCGCGGCGCATGCAGGCGCCG CGCCGGT CGG-GCC-GCCCGCGCGGCG-GCCCTG TTATCTCCAGGGCCG  75 28
CXD91_RS08070 1658493 .. 1658505 + -10.5  -3.38291   GTGGCGCCAGTGGCT                GGCCG AGA CGGCC                TTCTGACATTCTCCC  65 7
CXD91_RS08080 1661319 .. 1661329 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 194
CXD91_RS08085 NONE
CXD91_RS08090 NONE
CXD91_RS08095 NONE
CXD91_RS08100 NONE
CXD91_RS08105 1666511 .. 1666557 + -14.3  -3.09581   AACCTGCGTTAATGG TCAGTAATCCGGCCAGGCCGCG GCAT CGCGGCCCGGCCGGAA-ACCGC TGTCTTCCGCGTTTG  73 29
        ftsB 1666970 .. 1666985 + -10.4  -5.86332   CCGGACGCGCCAACA              CTCCCC GCCA GGGGAG               TTTTTTTTGCCTTGG 100 50
CXD91_RS08120 1669518 .. 1669538 +  -4.5  -3.04792   TGGCTCAGTCGCTCC            CCGGCGCCG CAA TGACGCCGC            TCTTGCGCCTGATCA  45 11
CXD91_RS08125 NONE
CXD91_RS08130 1670756 .. 1670783 +  -6.2  -3.39784   CGGCCCGGCTCCGCC        CGGCCAGC-CCTG GGC CAGGCGCTGCGCG        TGTTGTTCGGCCTGG  55 294
CXD91_RS08210 NONE
        sdhC NONE
        sdhD NONE
CXD91_RS08225 NONE
CXD91_RS08230 1691844 .. 1691854 +  -6.8  -3.01906   CAAGGAACTGATGGT                 CCGT CGT ACGG                 TCTAGTGTTTATTGG  51 10
CXD91_RS08235 NONE
CXD91_RS08240 1693505 .. 1693518 +  -9.5   -5.4505   CGTCCACTGAAAGAA               CCGCC TTCG GGCGG                TTTTTTCTTGCCGGC 100 54
CXD91_RS08270 NONE
CXD91_RS08275 NONE
CXD91_RS08280 NONE
CXD91_RS08285 NONE
        potA NONE
CXD91_RS08295 NONE
CXD91_RS08300 NONE
CXD91_RS08305 NONE
CXD91_RS08310 1707894 .. 1707912 +  -5.2  -4.36914   ACCGTCGGCGCCATG             TTGCCGGC CGC GTCGGTGA             TTTTCTCGGCCAGCA  69 331
        rmuC 1709808 .. 1709847 +  -5.5  -3.90744   CTGAGGAGCAGGCGC  GGGGGCGGAGAGCCC-CC GGCGG GGCGGGCGGTCCGCCCAA  TTCTTTCGCCGCCAA  63 37
CXD91_RS08325 1711510 .. 1711524 +    -7  -2.96984   GGCCCCGATTCTGGC               CCGCGC CTG GCCCGG               TATCTGCTAAATTTC  51 1
        rpiA 1712349 .. 1712377 +  -5.2  -4.07885   CGGGTCATAACCTTG       CG-GGTCGGGCAG CCCT CTGCGCAACCGCG        TTTTCAGGGGCACTA  64 106
        phoU 1713343 .. 1713398 +  -8.1  -3.05596   GGTTCATATGGCCAG GCGGCCTGCTCGCCCGGCGCCAGCCGC AGCA GCG-CGGGCGCCTCGCCA-TAGGCCGA TTCAATCCGCGCCTG  52 166
        hrpA 1720925 .. 1720965 + -17.6  -3.57263   GCGGTAGGGGGCTGT CCCACGGG-TGCCTGTCCC TGCG GGGACAGGCACCCCGAGAG  TTTGCGGGTGCCAGT  90 34
CXD91_RS08365 NONE
CXD91_RS08370 NONE
CXD91_RS08375 NONE
CXD91_RS08380 NONE
CXD91_RS08385 1729606 .. 1729637 + -13.6  -3.04144   ATAGGGCGCGTCGTA      TTCGCGCCGTGCCG GGGC CGGCGCGGCGGGAC       TGTTCCAGATGAACA  69 250
CXD91_RS08395 1732053 .. 1732070 +    -4  -3.76641   TATGAAGACAGGCGC             CGCCGC GGATAA GCGACG              TTTGCGTATTGCGCT  57 14
CXD91_RS08400 1733606 .. 1733634 +  -2.3  -3.27743   GCCGTTACACCCAGC       CGCGCAGCCAGT AGACGA ACAGGCCG-GCG        TATTCCTTGATGATG  44 438
        msbA 1737347 .. 1737363 +  -6.5  -3.53012   CAACACCTGTTGCGC              CCATTGC GGC GCCATGG              TTTCGGCGGCGGCCA  55 148
CXD91_RS08430 NONE
CXD91_RS08435 1740617 .. 1740630 +  -3.7  -4.74103   TCATGCGCGTGCGGT               CGCGC GAGA GCGCC                TTTTTCAGTTCGGCC  77 418
CXD91_RS08455 NONE
CXD91_RS08460 NONE
CXD91_RS08465 1745366 .. 1745404 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CXD91_RS08470 1748629 .. 1748639 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf 1748814 .. 1748848 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CXD91_RS08480 1751949 .. 1752002 +  -6.6  -3.76224   GCTGGTGACCGCGCG CCGCCGGCGT-C-GCTCAGGGTACGGC GAT GCCG-GCGCTGCGCAGCAGGGCGGCGG TTTCGTAGATGGGCA  62 33
CXD91_RS08520 1758852 .. 1758884 +  -4.6   -4.1899   GTCGCGGCGACGCTG      AGCGGCAGGCGGCA GATTG TGACGGCCGCCGCG      TTTTGCATACACTGG  66 25
CXD91_RS08525 1760350 .. 1760372 +    -9  -3.03441   CCAGGGTGCGGGCAA           AGCGCGCGAC CAT GTCGCGCACC           TGTTCGGCGGTGATG  55 107
CXD91_RS08535 1763113 .. 1763171 + -15.8   -3.6106   TATGTAGTAGCCGCC GCTGTCGGCGCGCACGCGCTCG-CCGC CCATGC GCAGCCGCGCGCCTTCGCGCCGGCCGC TTTCGACATATTCCA  85 396
CXD91_RS08570 1770631 .. 1770660 + -18.5  -3.09492   CCAGGGTCAGCAGTT       CGCGCGCGCGGGC TTCG GCCTGGGCGCGCG        TCTTGCCGTTGGCGA  85 432
CXD91_RS08595 1777347 .. 1777395 +    -8  -3.67296   CTGAACGCCGAGGCC TGGAGCG-GCGCCTGA-CGCCGGC TGG GCCCGCGCTTGGCCGCGCGCGCCG TTTGGATCGATAATG  63 11
CXD91_RS08600 1778557 .. 1778595 +  -8.7  -3.03159   GGCCTGGCGCTCAGT  GCGC-GCCGGCCGC-CGCC TCG GCCGCGCCGCCGCCCGCGC  TCTTGGCGGACTTGG  55 49
CXD91_RS08630 NONE
CXD91_RS08635 1786397 .. 1786416 + -16.4  -4.18018   TTGGCTCATGCAAAA            CGCGCCCC TTGC GGGGCGCG             TTTTCGCTGGCGGAC 100 54
CXD91_RS08650 1789686 .. 1789700 +    -7  -3.01924   GCGGTAATCAGGTGC               GGGCCG GCG CCGCCC               TGTTCGGCCAGCGTC  52 478
CXD91_RS08665 NONE
CXD91_RS08670 NONE
CXD91_RS08675 NONE
CXD91_RS08680 1795620 .. 1795651 +   -10  -4.07568   AGTAATCCCGCATCG      GCGGCGGGCT-CCGC ACG GCGGCGGCCCGCCCA      TTTTCCCGGAAGCAG  78 36
CXD91_RS08690 1797261 .. 1797305 + -15.6  -3.17075   TCGGCGTCGACCAGC GGCGTCCAGGCCAGCTGGCGC GCCT GCGCCAGCAGCTC-GGCCGCC TTGCCTTGCCCGGCG  77 197
CXD91_RS08705 1800445 .. 1800466 + -15.1  -3.01712   GGCCTGTTCTTCCAT           GGCCGTGGC CGCC GCCGCGGCC            TGTTCGACCAGCGCG  74 197
        greA 1803254 .. 1803274 +  -9.6  -3.07104   ATCCGAATTCCTGAA            CGCCGGGC CGTGC GCCGGGCG            TCTGTATCGTTGTCG  57 238
CXD91_RS08725 1805270 .. 1805307 +  -7.5  -3.16742   ACCGCGCCGTCTCCG   CGCGCGCTGAGC-GCCTC CAG GCGGCTGCGCAGGTCGCG   TTCGTGAGCGTTCAG  53 203
CXD91_RS08770 NONE
CXD91_RS08775 NONE
CXD91_RS08780 1812960 .. 1812973 +  -3.1  -3.17444   CGTCAAGATTTCAAT               TCGAG GAGG TTCGA                TATGTCTGTTTCTCC  44 58
CXD91_RS08785 NONE
CXD91_RS08790 NONE
CXD91_RS08795 NONE
CXD91_RS08800 NONE
CXD91_RS08805 NONE
CXD91_RS08810 NONE
CXD91_RS08815 NONE
CXD91_RS08820 NONE
CXD91_RS08825 NONE
CXD91_RS08830 NONE
CXD91_RS08835 NONE
CXD91_RS08840 NONE
CXD91_RS08845 NONE
CXD91_RS08850 NONE
CXD91_RS08855 NONE
CXD91_RS08860 NONE
CXD91_RS08865 NONE
CXD91_RS08870 1827121 .. 1827143 + -14.2  -2.70932   TGGCCCGGGCAGGGG           GGCTACGGCA CGC TGTCGTAGCC           TCGTTCGCGCAGCGC  69 44
CXD91_RS08885 1829324 .. 1829338 +  -5.6  -3.59262   GACCTGCTGCATCGC               CTGCCT GCA AGGCCG               TTTCGCGATCTCGGC  54 514
CXD91_RS08905 1836266 .. 1836282 +  -5.1  -2.78463   GCGCCGGCAGGCAGG              TTCTGCG TCG CGCACAA              TGTGCTGCGCAAGGT  43 398
CXD91_RS08920 1838157 .. 1838207 +  -5.5   -3.7108   GCCGCGCGTGGCGGA TCTGCGCGTCGATGCGCTGCCCG ATCCAGC CGGCCAGCTCA-CGAT-CGTAGA TTTCGGTGTCCAGCT  58 123
CXD91_RS08930 1839769 .. 1839791 +  -4.1   -5.4505   TTCGTTTGAAAACAG          GCACTTAGGC GCAA GCC-GGGTGC           TTTTTTCTTGGGCGG  90 47
CXD91_RS08940 1842919 .. 1842959 +   -11  -3.53012   ACGGGCGCGCGGCCT  GCGCGCAGGCTTTTGCCG GGTAA CGGCCGGGATCTGCGCGC  TTTGGCCCGGGACCC  70 65
CXD91_RS08945 1843576 .. 1843610 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS08975 NONE
        ectA 1852018 .. 1852028 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS08985 1853046 .. 1853068 +  -6.2  -2.78463   AGGGGGCATCCGGCG           CGCCGCCA CGTACAA TGGCGCCG           TATGATGCACACGCT  47 39
CXD91_RS08990 1853636 .. 1853681 + -11.7  -3.04144   CACCCGCGGGCGCGG CGACTG-GGACGTGCAGGCCTG AGC CAGGCCCGCGCGGCCTCAGGCC TGTTCGCCCTCGCCG  65 4
        tsaD 1858064 .. 1858082 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 204
CXD91_RS09025 NONE
CXD91_RS09030 NONE
CXD91_RS09035 NONE
CXD91_RS09040 NONE
CXD91_RS09045 1863968 .. 1863995 + -15.5  -3.75153   GATCCGCAGGAATGA        CGCCCCGGGGC TGCAAC GCCCCGGGACG         TTTGCGTTGGCGCGC  85 49
CXD91_RS09050 1864988 .. 1865041 + -14.8  -3.55444   GCGGACCTTCTGAGG CG-CTG-CCG-G-GGACGTCCCGTCC GGTGGG GGACGGGGCGTCCGCTCGGACAGCCG TTTCCGGCATGGCCC  81 28
        rlmD 1866512 .. 1866543 +   -18  -3.25169   CTGCCTGAGGCGGCC      CGCCGGGCGGCG GCGTTCAG CGCCGCCCGGTG       TTGCTCAGTTCTTCG  89 33
CXD91_RS09065 1867325 .. 1867378 +  -4.3  -3.52877   TTAGCGATCGATTGC TTGAGA-CTATCAATTAATTAGATTT ATT AAATTTTATTAATTGATAGCTAACAA TTATCATCTCTTCAT  52 48
CXD91_RS09070 1868176 .. 1868199 +   -21  -4.32201   CTGGCCTGATGCCTG          GCCGGCGGCG CTGC CGCCGCCGGC           TTTTCCCTTCCTTCG 100 32
CXD91_RS09075 1869863 .. 1869883 +  -8.1  -3.53811   GCCGCTGCCGTGCAG            CCCGAAGCC GTC GGCGGCGGG            TTTGCGCACGGTCAG  60 170
CXD91_RS09090 1873636 .. 1873682 + -20.3  -4.87626   TCGGCCTGGAACATG GCCCGGTTGGTGGCGATTCCTT CCAT GAGGAA-CGGCACCAGCCGGGC TTTTTCCTGTTCGGC 100 116
CXD91_RS09100 1874906 .. 1874916 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS09110 1875899 .. 1875938 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD91_RS09115 1877212 .. 1877253 +  -7.9  -3.89354   GCTGCTTGATCCGCC TCG-GTGGCGGTGCCGACCG TGC CGGTCAGCGTCACCACGCCA TTGTTCGTTTCGACC  67 268
CXD91_RS09150 1886430 .. 1886465 +   -19  -3.14132   CCGGGTGCCCGAGTG    CCCGGGTGCCTGTCCC AGCG GGGACAGGCACCAGGA     TTCCTGCGGGGACAG  90 50
CXD91_RS09160 1888513 .. 1888534 +  -2.1  -2.87132   AACTGCGGGCCTTGT           TGCAGGCGT AACG GCGCGGGCA            TGTCTGCGGGCGGCC  40 15
CXD91_RS09165 1889804 .. 1889832 + -10.1  -2.77994   TAGCGCCGGCCGGGT        TCGGCGCGCCGCC GAG GGCGGCGCGGAAA        TGGTTGCAATTTCTG  57 38
CXD91_RS09170 NONE
CXD91_RS09175 NONE
CXD91_RS09180 1891886 .. 1891901 +  -6.2  -4.83722   GTCTATGGCATCAAG              TTGCAT GGTT ATGCAA               TTTTATTCTGCTGTT  86 490
CXD91_RS09190 1893309 .. 1893324 +  -8.2   -3.4247   TCCAGCGCCGGCGCG              CCGCCG CCTT CGGTGG               TCTTCTTCAGCTTCT  61 343
CXD91_RS09215 1900720 .. 1900730 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS09220 1902141 .. 1902151 +  -2.4  -4.06419   CAGGGTGTCAGCATA                 CAGG TAG CCGG                 TTCTTTGTAGCAAAA  58 432
CXD91_RS09230 NONE
CXD91_RS09235 1905866 .. 1905920 + -15.8  -2.61383   GCTGGACATCATCAC GGCCTGAGCTTCGCGTCTTGCGCCCGC ATCG GCTGGCGCAAGACGCG--GCA-GGGCC ATTCTCAATAGCGGT  74 19
CXD91_RS09270 1915299 .. 1915318 +  -7.1  -3.42354   AAGGTGTATTGGCCG            CTGGCCT TGGCCT GGGCCAG             TTCTGCCTTGACCTG  58 290
CXD91_RS09280 1917241 .. 1917262 + -14.4   -2.6155   CCGGGCCGCGCCGCG           GGGCCGCC TATAAT GGCGGCCC            GTTGGTCTTCCCAGG  69 45
CXD91_RS09285 1917573 .. 1917599 +  -7.9  -5.06816   GGCGCCATCTGACGC        ACTGAGCGCGCC ATCG GGCGCGC-CGGC         TTTTTCTTGGACAAT  88 21
CXD91_RS09290 1918160 .. 1918171 +  -2.2  -4.05004   AGTGCCGTGCCTTCT                C-CGG CGT CCGCG                TTATTGTTCTACTGC  58 246
CXD91_RS09295 1918472 .. 1918487 + -11.8  -4.93547   AGCGCGTCCATAAAA              GCCCCC GCCA GGGGGC               TTTTTCATTGCTTGG 100 48
CXD91_RS09300 1919335 .. 1919345 +  -3.2  -3.77808   GCGAGATCTTCAAGC                 GACG CGG TGTC                 TTGTGTTCTGGTCGC  56 261
CXD91_RS09305 1919712 .. 1919737 + -16.9  -5.06414   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 92
CXD91_RS09315 NONE
CXD91_RS09320 1922533 .. 1922559 + -14.4  -3.01924   TCGATAAGCGTTGAT         CGCGCCGGCC CTCATCC GGCTGGCGCG         TCTTCACCAGAGATA  72 78
        clpX 1923910 .. 1923944 + -19.6  -3.05819   GATCCCGGCCGCCAT     TGCAAGAAAACCCGTT TGT AACGGGTTTTTTTGCA     TCTTCCCGCTATCTG 100 46
CXD91_RS09330 1926565 .. 1926589 + -22.9  -5.45726   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTCGGCTATC 100 59
CXD91_RS09340 1929069 .. 1929085 +  -7.2  -4.21827   TGAGCCCGCGCGCCA              TCGCCG CGATC CGGCGG              TTTTCCCGTGTTTCA  72 38
CXD91_RS09345 1930069 .. 1930089 +  -2.4  -3.16564   GGTGCCGTTGGCCAA            GTCGCTCG GCGTA CGGGCGGA            TTGATGCCATGAAAA  42 1
CXD91_RS09350 1930537 .. 1930550 +  -2.3   -2.6563   GGCGATGGTGGCCGA               GTGGC TGAT GCAAC                TGCGTTATTGAGCGC  38 1
CXD91_RS09355 NONE
CXD91_RS09360 NONE
CXD91_RS09365 NONE
CXD91_RS09370 1933858 .. 1933885 + -11.3   -3.1876   TCAAGGCCGAATTGC       CGC-CGCTGCCGG CCGA CCGGC-GCGCGCG        TTCGTGGATGGGCTT  64 125
CXD91_RS09385 NONE
CXD91_RS09390 NONE
CXD91_RS09395 NONE
CXD91_RS09400 1938291 .. 1938307 + -13.7  -3.65812   GAGCCTTCAGCGCGG              CGTGGCC GGC GGCCACG              TTGTATTGCCCCACC  80 47
CXD91_RS09410 1940157 .. 1940186 +    -2  -3.64703   CGCACGCGCAGCCGC       TGCCGCCCGCCGG CAACC CCGGCGC-TGGGA       TTTACATGCCCCGCA  51 392
        uvrB 1945465 .. 1945479 +  -3.5  -2.70932   GAAAGACGGAAATTA               GCGGA GAAAA TTCGC               TCGTTACAAACAGGC  41 47
CXD91_RS09435 1946258 .. 1946273 + -11.8  -5.00616   CCCAAAATGAGAAAA              CCGCGC GACT GCGCGG               TTTTTTCCGACCGAG 100 96
        iscR NONE
CXD91_RS09445 NONE
        iscU NONE
        iscA NONE
        hscB 1949488 .. 1949508 +  -2.4  -3.32844   GGCGGCCGGCCCGAT            GCGCGGCA ACCGA TGACCCGC            TTGTGCGGTGCCGCG  44 81
        hscA NONE
         fdx NONE
        iscX 1951992 .. 1952026 + -24.4  -3.53012   GCCGGCGCGCCGCCC     GGACAAGGGCCCCGTC ATG GACGGGGCCCTTGTCG     TTTCGGGGCCGCGCG 100 48
CXD91_RS09480 1953153 .. 1953187 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS09495 1956060 .. 1956079 + -12.1  -5.60993   TGCGTTTGGCTTGAG            CCCCGCG AACCCC CGCGGGG             TTTTTTTATGGCCCG 100 66
CXD91_RS09505 1958849 .. 1958872 +  -9.4  -3.15249   CGCTACGTCACCACG          GCCTGCGCGC TGGC GCGCGACGGC           TTGATCGACGGTATC  59 364
CXD91_RS09515 1960498 .. 1960522 +  -7.2   -3.4072   CATTTCGTGCCGGCC          GGCGTCAA CTGCTATTC TTGACGCC          TTCTCCTGCCAGGTC  56 54
CXD91_RS09520 1961394 .. 1961407 +  -2.3  -2.70354   GCGCGTGGGCGACGC               GGTCG AGAT CGAAC                TGGATTTCTAGCCCC  38 1
CXD91_RS09525 1961926 .. 1961953 + -10.5  -2.55253   GGCCTGACGGCCGTT        GCGCGCGCGCCC GGCAA GGGCGC-CGCGG        TCACTTCCGATTCGT  57 34
CXD91_RS09530 1963045 .. 1963087 +  -7.7  -5.59357   CGGCGCGGGAACCCG GGGCGGCATCC--TCACACGC GGC GCGTGCAAATGGATACCGCCC TTTTTTTAATGTCAT 100 49
CXD91_RS09535 NONE
CXD91_RS09540 1965837 .. 1965855 + -17.4  -5.78622   AGGCGACGCAACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGCGTAC 100 47
CXD91_RS09555 NONE
CXD91_RS09560 1968747 .. 1968759 +  -6.2  -3.30124   TTCGCCCGGCTGAAA                GCGG TCAGT CCGC                TTATAACAACTCAAC  53 28
CXD91_RS09565 1970356 .. 1970413 +  -3.1   -4.2679   TATTCTGGGGAATAT CCAAGAACTGAGTCGCCGCGCGGCGCCG CCA TGGCGCCGCGCAGC-ACGTAGGAGATCG TTTTCGTGCAAATTC  63 15
CXD91_RS09570 NONE
CXD91_RS09575 NONE
CXD91_RS09580 NONE
CXD91_RS09585 1975207 .. 1975225 + -17.4    -5.252   GCGCGACGCGCTGCG             GGCCGGCC GCT GGCCGGCC             TTTTTTATGGCCATG 100 42
CXD91_RS09595 NONE
CXD91_RS09600 1978952 .. 1978972 +  -3.2  -2.62616   GACTTCCCGTTCCTA           GCG-GGGCA TTCC TGCCAGCGC            TGGTATCGGCCCTGA  39 25
CXD91_RS09605 1979797 .. 1979813 +  -7.9  -3.63991   CCGCGCAACGGCGCA              CGGCGCT GCA GGCGCTG              TTCTTCGACATGGTG  63 398
CXD91_RS09615 1982261 .. 1982286 +    -6  -4.15044   ATTGGTCAGTTTCTA         CGCCAGCCAA TAAGCC TCGGCAGGCG          TTTCTTCACGCAGGA  66 13
CXD91_RS09620 NONE
CXD91_RS09625 1983731 .. 1983762 +  -8.7  -2.94218   TCCGGGCAAGGAGTA     GGG-CGGCGGCGCTG GCAT CGGC-CTGCCGACCC      TCTATAATCAAAAAT  54 25
        alaS NONE
CXD91_RS09635 1986684 .. 1986711 + -21.4  -3.01791   GCGCCTGCCGGCAAG        CAAACGGCCCGC GCAA GCGGGCCGTTTG         TCTTGGCGCGAGCGT 100 41
CXD91_RS09645 1987994 .. 1988012 + -10.2  -4.55295   CTGCATTTCTTGAAA             GCGCTGCC TAT GCCAGCGC             TTTCTTTGTCCGCAA  89 139
        rimM NONE
        trmD 1989817 .. 1989829 +  -9.1  -4.08216   GGCCAGTCCGCAGCG                CAGCG CCA CGCTG                TTTTCGGCCGACTCG  72 400
CXD91_RS09695 1996248 .. 1996274 +   -15  -3.17075   CGCTTGCCATGGGCA         GGAACCCCCGGC CGC GCCGGGGGGCCC         TTGCGTTCAGACGCC  76 85
CXD91_RS09705 NONE
        rlmN NONE
CXD91_RS09715 NONE
CXD91_RS09720 NONE
CXD91_RS09725 NONE
CXD91_RS09730 NONE
        bamB NONE
         der NONE
CXD91_RS09745 2008589 .. 2008603 +  -9.2  -2.52464   GTAGAGTACTGATTT               CGGCGC ACT GTGCCG               TCACTTAAAACAAAC  54 118
CXD91_RS09750 2008899 .. 2008928 + -17.2  -4.36595   AGCATTACCCTTGAT       TGCCCGCC-GCGC GGCCA GCGCCGGCGGGCA       TTTTCGCTTTGGCTC 100 53
        hflX NONE
        hflK NONE
        hflC 2012350 .. 2012379 + -19.3  -4.98531   AAAACATTCCGCATA       CGGCTGAGCGGGC TTAC GCCCTCTCAGCCG        TTTTTCGTTTGGGCA 100 122
CXD91_RS09770 2013645 .. 2013655 +  -6.8  -2.55896   GATTTCCGGATTTCC                 CGAG AAA CTCG                 ATATTGATTCGTAAA  47 76
CXD91_RS09775 2014971 .. 2015004 + -18.1   -3.9461   TCAAGGGGTAGGGCG     CCGCGGGCCGCGCCCC GTT GTGGCGCGGCCT-CGG     TTATTATTCGCCAGG 100 30
CXD91_RS09780 2015789 .. 2015799 +  -3.2  -3.23452   CTGTGCTACTGATGC                 GGCA AGT TGTC                 TTAGCTTGTCGCCAT  46 195
CXD91_RS09785 2016114 .. 2016143 +  -6.5  -3.16055   GCCTGTATTGATGCC       TGATTCCCGAATC TATT GATTCCAGAATCA        TTCATCCAGGATTTG  51 30
CXD91_RS09790 2018394 .. 2018419 +  -6.1  -4.24002   TGGCGGGTGGCGGCA         TG-CATGTGCCG GGC CGGCGCATGGCC         TTTTGCGGTTTGCGG  70 260
        rpoD NONE
CXD91_RS09805 2021226 .. 2021251 + -16.9  -5.14626   TACCAAGTAAACATG         CGGGTCTCGGA GCAA TCCGAGGCCCG          TTTTGTTTTGGTGGT 100 36
CXD91_RS09815 2023003 .. 2023019 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD91_RS09830 2024708 .. 2024749 +  -6.3  -3.02511   CATGCAGTGGGTGCG CCAGCA-GTCGCCGGCCGGC TGA GCCGGCGCGCGCCGTTCAGG TCTTGAGGCGGTAGC  49 4
CXD91_RS09900 2035636 .. 2035648 +  -3.3  -2.52516   TGCCGCACCGCCTCC                AGCAG CGC CTGCA                ATTCGTCCTCGGCAA  39 62
        bioF NONE
CXD91_RS09915 NONE
        bioD NONE
CXD91_RS09925 2041018 .. 2041028 +  -8.2  -3.53444   GGTCACCGCGCCCGT                 GGCC ATG GGCC                 TTTCCGAAACCCTGG  62 446
CXD91_RS09940 2042499 .. 2042538 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD91_RS09955 2047186 .. 2047200 +  -5.6  -3.78934   CTGGTGAGCTACAGC               GCCAAG GCC CTGGGC               TTCTTCTAACCCGGG  60 2
CXD91_RS09970 2050446 .. 2050456 +  -8.2  -3.33162   TGGTCAACGTGGCGT                 CGGC ATT GCCG                 TTCTCGAATACGCTG  59 280
CXD91_RS09980 2052438 .. 2052454 +  -9.3  -2.75481   TGCTCCTGGGTGGCA              GGGGCCC CGC GGCCCCC              TGGTTGGAATTGGCA  55 392
CXD91_RS09990 2053777 .. 2053803 + -13.6   -3.7795   TGGATTCGCCGCGCT         TGGCCGCGAGCG CCG CGCCGGCGGCCA         TTTGCTGGGCTTTGG  82 280
CXD91_RS10000 2054789 .. 2054816 + -17.8  -3.02144   TCGCGCAGCGTGGTT        TCGCGGTAGGCGC GCA GCGCC-ACCGCGA        TGTTGGCGACGGTAA  82 361
CXD91_RS10010 NONE
CXD91_RS10015 2056515 .. 2056528 +  -4.5  -3.02144   CGCCGCGGCGCTGCA               GGTCG GTGA TGACC                TCTTCGAGCGCCTGC  46 208
CXD91_RS10035 2060883 .. 2060893 +  -3.2  -2.78816   GTAGCTGGGCGGGTC                 GTAC ACC GTGC                 TGTCGTAGGGGCTGG  40 329
CXD91_RS10065 2065862 .. 2065877 +  -3.2  -2.52516   CAGCGGATATTGATC              GCCG CCATCGCC CGGC               CTTGCTGGTCGACGC  39 120
CXD91_RS10085 NONE
CXD91_RS10090 2069781 .. 2069809 + -10.2  -3.52073   TTTCGGCCACCATCA        GCCGGTGCGCCT CGTGC AGGCGCAGCTGC        TTCTGGTATTGCAGC  65 177
CXD91_RS10120 2075918 .. 2075942 +  -2.7  -4.07568   CCGTACCAGCGGGCA          CGGCATTGCGG CGG CTGCAACACTG          TTTTGCGCCGGCGCC  59 49
CXD91_RS10125 2077193 .. 2077239 +  -9.6  -3.68222   GGTCGCCGCCGGCCA GTTGC-CG-G-GCCAGGTCGCGCG CCA CGT-CGACCTGGCGCGCGTGCGAC TTGTTCGAATTGGCG  68 224
CXD91_RS10140 2080091 .. 2080132 + -14.3  -3.19513   GGGACAGGCAAGCAA TTGGCGGGTGCCAGTCCCC CTGT GGGGACAGGCACCCGGGGG  TTAGGTTGCCGTTCT  73 126
CXD91_RS10150 2081991 .. 2082001 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS10165 2084414 .. 2084442 +  -8.1  -4.10552   GCCGGCGTGCCGTTG        TCCGGCTTGGC CGCCTGT GCCATGTCGGA        TTTGCTTTAGTGGAA  69 395
CXD91_RS10175 NONE
CXD91_RS10180 NONE
CXD91_RS10185 NONE
CXD91_RS10190 2088075 .. 2088085 +  -2.4  -2.94416   ACCCATCGCGCTCGT                 CGAC CTT GGCG                 TCTGTCATGAACATC  41 40
CXD91_RS10195 NONE
CXD91_RS10200 NONE
CXD91_RS10205 2090410 .. 2090437 + -10.6   -4.2535   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT  89 104
CXD91_RS10240 2095710 .. 2095744 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS10275 NONE
CXD91_RS10280 2105040 .. 2105089 +  -5.6  -3.29144   GTTCGATCACAATAC TCG-GCGCGGCTTGACACCGGGCCG CGC CGGCCCGCGG--GGGCCGCGCACAA TTATCAACACCATCC  51 12
CXD91_RS10285 NONE
CXD91_RS10290 2107394 .. 2107410 +  -3.6  -3.14344   GCGCCGGCCACGCGC              TCGGGC GCCAG GCCCCA              TTCGTGCAGCACCTC  45 102
CXD91_RS10325 NONE
CXD91_RS10330 2114689 .. 2114701 +  -3.3  -3.65046   GGCCGCGCTGATCGC                CATCG CCC CGCTG                TTCTTCCCCTCCGGC  53 82
CXD91_RS10340 2116705 .. 2116759 + -12.1  -3.01712   AAAGCCGGGCCGCCG GCCA-GCAT-GGCCGCCGCCGTGGTGG CGC CCATCAAGGCCGCGGCCGACACGTGGC TGTTGCCCGCCAGCC  66 277
        queF 2119880 .. 2119906 +  -7.9  -2.52464   CAATAGCCGCGTTCA         GCGCGGTGCGG CGCGC CTGCATCGCGA         TCCATTGCGCCAGCA  49 35
CXD91_RS10420 2135994 .. 2136033 + -11.3  -3.28712   GCTGACCGCCTGGCG  CTGCCCGCCCGACAGCA GGCCGA TGCGGTCGGCCAGGCGG   TTCTCCAGCCCCAGG  66 387
CXD91_RS10510 2155051 .. 2155070 +  -3.4  -2.82595   ACAGGTCCTGAGGTG            GCTTACGG CTTG CCGCACGC             GTTTCGGTGGTTCAA  41 175
CXD91_RS10515 NONE
        rpmG 2155780 .. 2155801 + -18.7  -4.86731   GCGCGCCATGGTGAA           CGGCCCCGC CAGG GCGGGGCCG            TTTTATTTGGCAAGG 100 68
CXD91_RS10545 2160647 .. 2160677 + -22.6  -3.85698   CGTCTCAGGTCAAAC       CGCAGAGCCCGCCG CAC CGGCGGGCTCTTCG       TTTATGCGGCGGCGA 100 49
CXD91_RS10550 NONE
CXD91_RS10555 2162477 .. 2162517 +  -2.4  -5.00884   TCCTATAATCGATGG T-TTTGACCGCCCGCGCCC TGCC GGGCGCGGTCCGTTACCTA  TTTTTTCGCACGAGT  79 45
CXD91_RS10560 NONE
CXD91_RS10565 NONE
CXD91_RS10570 NONE
CXD91_RS10575 NONE
CXD91_RS10580 2168777 .. 2168787 +  -2.4  -3.01712   TATCGGCGCCCGCCG                 CCAG GCA CAGG                 TCTTCCCGGAAACGC  41 104
CXD91_RS10590 NONE
CXD91_RS10595 NONE
CXD91_RS10600 2172351 .. 2172375 + -13.6  -4.09685   CCCCCAAAAACAAAA         CCCCGCGAGCC GTGA GGCT-GCGGGG          TTTTGAGCAATAAAA  85 355
CXD91_RS10635 2180138 .. 2180156 +  -8.1  -3.20348   ACCTTCGCCATCTGG             GTGCTGC TGTTC GCAGCGC             TTGCCTATTACTCGC  54 285
CXD91_RS10650 NONE
CXD91_RS10655 NONE
CXD91_RS10660 2185387 .. 2185401 +   -10  -3.33696   GGCGTAGCCGCTGGT               TTCGCC GCT GGCGAA               TTGCTTGGAAAAGCC  63 336
CXD91_RS10685 2188709 .. 2188729 +  -4.7  -3.62046   AGCTCGCCGGCCTCG           CC-GGCCA GCGCCA TGGCCAGG            TTCTTGGGCGAATGG  54 285
        acnB 2192279 .. 2192298 + -16.4  -4.91852   TTCGGCCATGACAAA            GGCCCGCC GCAA GGCGGGCC             TTTCTTTTTGCTGCG 100 48
CXD91_RS10705 NONE
CXD91_RS10710 2193558 .. 2193568 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD91_RS10715 2194694 .. 2194706 +  -4.8  -4.07568   GGTCAGGCTGCCAGC                CTGG TAGTC CCAG                TTTTCAGGCGCCCCC  63 147
CXD91_RS10735 2198712 .. 2198732 +  -3.8  -4.09864   GAGCACGTCGGCCCG            GCGCCCGC CTCGC GCGGGAAC            TTTTGACGCATCGAT  61 108
        acnA 2201606 .. 2201629 + -19.6  -5.26875   CCTGCGCGACCCGAA          CCCTCCGGCC TGCT GGCCGGAGGG           TTTTTTCGTTGGACG 100 59
CXD91_RS10750 2203835 .. 2203855 +    -4  -3.79687   GTTCCACTGACCGGA           TC-GCGCCGC CAT GCG-CGCCGA           TATTTTCTGCCGCGT  57 31
        earP 2204992 .. 2205008 +  -2.2  -2.64274   TGCTTTGCCCGGATC              GGCC GGTGCTCAA GGCC              TCACTTTGACAGCCT  38 60
         efp 2205688 .. 2205707 + -16.4  -5.75342   CAGGCGCAACCGAAA            CGGGCCGC ATGC GCGGCCCG             TTTTTTTTGCCCCGG 100 56
CXD91_RS10865 2225857 .. 2225869 +  -5.5   -3.2614   TCTTGAAAAAAGCTG                GCACG GTT TGTGC                TTGGTATGGGGCATC  51 256
CXD91_RS10885 2229049 .. 2229102 +  -8.8  -2.82623   ACTTCGTCAACGATT GACGGTTGGCA--CGGTGCCTGTCCC CACG GGGACAGGCACCGCATCCCCGCCTAC TCGTTCTCCGCCCCG  54 24
CXD91_RS10925 2240327 .. 2240369 + -10.5  -3.40403   TAGTAGCGCGACAGC GCGCGTGA-GCACGCCGCGC GCAT GGGCGGCCTGCATCACCTGC TTGTCGTCCAGCCCC  65 171
CXD91_RS10935 2243097 .. 2243140 +   -34  -3.06815   TTGTTTGGATCGTTC GACGCGGGATGGGGGCGCCC CCAT GGGCGCCACCATCCCGCGTC TGTATTGAGGAGGAT 100 41
CXD91_RS10940 2244652 .. 2244675 +   -21  -5.47399   CCCGCGGGCAAGCAA          GGCCGGCGCC TTCG GGCGCCGGCC           TTTTTTTCGCCTTGC 100 47
CXD91_RS10945 2245741 .. 2245771 +  -5.4  -2.71712   CCCTAGGGCACGACC      TCGGCCAGCACCT CGTCGC AGG-GCCGGCTGA       CTTTCAGGGCGAGCA  45 107
        pgaA NONE
        pgaB NONE
        pgaC NONE
CXD91_RS11015 2262109 .. 2262123 +  -5.6   -4.1891   CGCCACCAGGTCGGC               CTGCCC GCT GGACAG               TTTCTGTTCGGCCAG  66 180
CXD91_RS11030 NONE
CXD91_RS11035 NONE
CXD91_RS11040 2264906 .. 2264916 +  -2.4  -2.54523   GAAAACCCACCTCCA                 GGGG TAA CCCA                 TGCATTCCAGTCTGC  38 19
CXD91_RS11045 NONE
CXD91_RS11050 NONE
CXD91_RS11055 NONE
CXD91_RS11060 NONE
CXD91_RS11065 2270518 .. 2270545 + -18.6  -3.11687   GACAGGCGCAAAAAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTCGGTACTGCTTGC  90 189
CXD91_RS11100 2277476 .. 2277491 +  -3.2  -4.07568   TTCCACCGGGGTATC              GGGC CGCAACTC GCCC               TTTTCGACCGCGCGG  60 198
CXD91_RS11155 2286577 .. 2286598 + -14.5  -4.93696   GCCGCAAAAGAAAAA           GGCCCTTGA TTGC TCAAGGGCC            TTTTTGATCTTTGGC 100 209
CXD91_RS11195 NONE
CXD91_RS11200 2294965 .. 2294975 +  -2.4  -3.06796   CGTGATCATCGAAAA                 GGCC GAA GTCC                 TTGAATAAGCTGGCG  41 7
CXD91_RS11205 2295931 .. 2295956 + -19.1  -4.55798   CCGCGCCGGGAAAAA         GAGCCTGTCCC CGTC GGGACAGGCTC          TTTTCATTTGGCGTA 100 204
CXD91_RS11225 2300289 .. 2300318 + -22.3  -2.62616   CCACTCCGGCGGCCA       GTGTGCCTGTCCC CGCC GGGACAGGCACAC        TGCTGTACGCCATCG 100 87
CXD91_RS11235 2302526 .. 2302542 +  -5.7  -3.09803   CGCGCACATTGACCA              CCGTGCC GTT GTCGCGG              TATTCGCTGGCCTTG  48 194
CXD91_RS11250 2305554 .. 2305586 +  -8.5  -3.61715   ATCGCCCCGGCCTCG    CCGCCCGCCA-G-GCC GAAC GGCGCATGGCGG-CGG     TTGTTCGACAGGATG  63 184
CXD91_RS11270 NONE
CXD91_RS11275 NONE
CXD91_RS11280 2313076 .. 2313087 +  -7.2  -3.27923   GCGCTGGTGGCCAGC                GGCC TGGT GGCC                 TTGCTGCTGTTCACC  54 111
CXD91_RS11290 NONE
CXD91_RS11295 2316335 .. 2316354 +  -2.7  -3.58343   CACCAACGTCATCGG            CTGCGCC ATCTTC GCCGCGG             TTTCCGGCTCGTCGG  49 332
CXD91_RS11335 NONE
CXD91_RS11340 2340332 .. 2340349 +  -3.4  -3.73775   CGGCCCGGTGCAGCC             GCC-GCA GGCTA TGCAGGC             TTTGCTGGCCATAGG  55 419
CXD91_RS11390 2347379 .. 2347391 +  -3.3  -3.13371   CGCTATTTTTATTCG                CCGGG CGC TTCGG                TATATTAGTGGCCTG  44 76
CXD91_RS11395 2348272 .. 2348287 +  -7.5  -3.39895   CCTGGGCCCGCTTGC              GCCGG CGGTTT CCGGC               TTCGTTCCTCCCGAC  59 133
CXD91_RS11400 NONE
CXD91_RS11405 NONE
CXD91_RS11410 NONE
CXD91_RS11415 NONE
CXD91_RS11420 NONE
CXD91_RS11425 2354968 .. 2354988 + -10.4  -2.70932   CTCGACGCCATGGTG           GCGC-GCGC CAAC GCGCCGCGC            TGATTCACCCCGCCC  57 2
CXD91_RS11490 2367861 .. 2367871 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS11495 NONE
CXD91_RS11520 2375307 .. 2375337 +  -5.2  -3.14602   TCGCAGCAGGTCAAG       GCGCGCCTGCTCCC CTA GGGAGCGCGTCCGG       TCTTGGTCGACTAGA  49 8
CXD91_RS11555 2383258 .. 2383268 +  -8.2  -3.21747   GCGTCGCGACGCGCC                 CGCG CAG CGCG                 TTACTCCTCCCATCC  58 106
CXD91_RS11560 NONE
CXD91_RS11565 2385839 .. 2385853 +  -2.7  -3.75169   AGAATCCCTGCCCCG               CGTGG CCGGT CCCCG               TTTCATGGAGTCGTC  53 39
CXD91_RS11570 2386707 .. 2386741 + -14.9  -3.63515   GCTCGTCGATGACGA     GGTGGGCCATGCCGC GTTCG GTGGCCAGGCCCACC     TTCTTGCCGATGGGC  83 64
CXD91_RS11645 2400506 .. 2400527 +  -3.6  -3.53012   GGCAGCACCGCGTTG           GCCGCGAT GCCCTG GTCGCGGG            TTTCGGCGGCCAGGG  49 205
CXD91_RS11665 NONE
CXD91_RS11670 2405463 .. 2405481 +  -6.7  -3.21416   GAAGACGCCGCCCGA            CG-CCGCA ACGC TGCGGTCG             TTGATCGTCGCCATG  52 168
        arsH 2406711 .. 2406721 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 255
CXD91_RS11690 2408153 .. 2408187 + -17.1  -2.66316   GGGCGTCGCTCACGG    CGCCTCCTGGCCGCCG TCCT TGGCGGCC-GGCGGCG     TCATGTCGTAGGACG  80 453
CXD91_RS11710 2411575 .. 2411592 +  -4.8  -3.16742   CCCATGCGGTTTCCC             GG-CGCC TGAGC GGCGGCC             TTACTCCGGCTTGAG  47 17
CXD91_RS11730 2415299 .. 2415310 +  -5.8  -2.62184   CGCAGATCGGCACCT                TGCG CACG CGCA                 TCGTCTGAGCGGGCA  44 6
CXD91_RS11735 NONE
CXD91_RS11740 2417349 .. 2417359 +  -6.8  -2.94912   GCGCCGCGCATCCAG                 GCAG AAC CTGC                 TCTATAACTTCAAGG  51 59
CXD91_RS11745 NONE
CXD91_RS11750 2419612 .. 2419623 +  -7.2  -3.14132   TAGAGCGAGCGCCGG                CCCG TGCG CGGG                 TTGGTGCGCACCAGG  53 253
CXD91_RS11760 2421182 .. 2421200 + -10.4  -3.68073   TGCTGGCGATTGAAA             TATACGTC AAT GACGTATA             TTCTTCCATGAACTG  70 109
CXD91_RS11770 2421732 .. 2421757 + -13.3  -2.79831   AGCTGCGATTCAGAA         CCGCCAGCG CAGCACCA CGCTGGCGG          TGTGCTGGCGGTTGC  67 45
CXD91_RS11780 NONE
CXD91_RS11785 NONE
CXD91_RS11795 2429881 .. 2429929 +  -7.3  -2.84192   ACAGTCCGGCCAGCG GCC--GCGCTTCGG-CGCGCGGCG GCGC CGCCGCGCGCCCGGCCCGCAAGGG TGTACTGCTCATGTC  50 439
CXD91_RS11850 2441526 .. 2441539 +  -9.5   -2.5092   CTTCCAGGCCGCGCC               GCGCG GCCG CGCGC                ATTCATAAAATATTC  54 61
CXD91_RS11855 NONE
CXD91_RS11860 2443557 .. 2443582 +  -9.7  -3.24232   GGCCGATCCGCCCGC         CGC-CCTGCCTA GAA TCGGCAGGAGCG         TGTCTTTCAAGGGAG  61 120
CXD91_RS11865 2444424 .. 2444434 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS11870 2445454 .. 2445465 +  -5.8  -3.01712   GCGGCGTCGGCTCGG                TCGC CGGC GCGA                 TCTTCGGCGCGAGCC  47 41
CXD91_RS11880 NONE
CXD91_RS11885 2447327 .. 2447337 +  -3.2  -4.09685   TCGCGGCACTCGCGT                 CATC GGA GGTG                 TTTTGGCCCGTACGA  59 252
CXD91_RS11890 2448245 .. 2448266 +  -8.7  -3.30771   CATATCGTCGGCCAC           CGCC-TCGGC CTG GTCGATGGCG           TTCTGCACGCTCTCG  58 328
CXD91_RS11900 2450538 .. 2450556 + -12.4  -3.57144   TCCAGCACCGCCGCG             GCGTCGGC CGC GTCGACGC             TTTCCCAATGCAGCG  74 344
CXD91_RS11970 NONE
CXD91_RS11975 2469860 .. 2469895 +    -9  -4.70266   AAGCCCGTCCAGCAC   GACGGCGCCCGCGCGG CGGGCA CGGCGCGGG-GCC-TC    TTTTTCCCTGCTGTT  86 94
CXD91_RS11980 2472195 .. 2472216 + -15.9  -4.77165   CCCGGCAAGAAAAAA           GCCGGCATC TCTC GATGCCGGC            TTTTCTTCTGCGCGC 100 306
CXD91_RS12000 2475641 .. 2475659 + -10.2  -2.62184   GTCACCCCGATCCCG             GCCGCCAC CAT GTGGCGGA             TGGTCTCCAGCGAGG  55 278
CXD91_RS12035 2484599 .. 2484657 + -12.3  -4.06419   CGACGCATGAACGGC GCCGGCGCGCGGCCAAAGAAAAACCGCC CGAA GGCGGCTTTTCC-TGGCGGCGCACGGCC TTATTTGTCCACGAA  83 31
CXD91_RS12045 2486887 .. 2486914 + -15.6  -4.59773   ACTGCCTTGTTTGTC        GGCAAAGCGGCC ATCC GGCCGCTTTGCA         TTTTTCCCCGTAGCA 100 107
CXD91_RS12050 NONE
CXD91_RS12055 2489433 .. 2489443 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS12060 2490755 .. 2490766 +  -2.2  -3.21099   CCCCTCGACCAGGTA                G-GCG GCG CGCTC                TTCGTGCTCGGGCGG  43 333
CXD91_RS12075 2493521 .. 2493574 + -19.6  -3.01712   GGGGCCGGCGCCGTC CCGGCCG-CGGCAGCCGCGGCAG-CCG GTT CGGCCTGCCG-GGCCGCCGCCTGCTGG TGTTCGACCGCCCGG  87 294
CXD91_RS12110 2502419 .. 2502447 + -11.6  -2.65298   TCCAGCGAGGCCGCC        GCCGCCGCGGTC TGCTC GGCCATGGCGGC        ATTCTCCTGCGTGGC  61 105
CXD91_RS12125 2506583 .. 2506618 + -20.4  -2.84602   GGCACCCCGGATTCA    GCGCGTGCCAGTCCCC GTGC GGGGACAGGCACGCGG     GTTTACTGCAGTGCC 100 154
CXD91_RS12135 2508629 .. 2508644 +  -6.2  -3.07355   CATAGACCGGTGCCC              CTGAAA TCCT TTTCAG               TCGTTGTTGTTTCAA  49 230
CXD91_RS12140 2508827 .. 2508871 +  -3.6  -3.02471   TCATGGAAGGCACGG GCGGCGTGCGCGTCATC-TACT ACT AGCACGATGAC-CTCATGCCAC TGTATCTGCTGGCGC  44 0
CXD91_RS12145 NONE
CXD91_RS12150 2509492 .. 2509504 +  -9.1  -3.28712   GGGCAATTTGAGCTC                GCCGT GCA ACGGC                TTGTCGGACACGCAC  59 243
CXD91_RS12160 2512143 .. 2512164 +  -7.9  -3.61398   CTCCTCGATGGGCAC           GGCC-GGCGC GCC GCGCCCGGCA           TTGTTGAACAGCACA  60 501
CXD91_RS12170 NONE
CXD91_RS12175 2514327 .. 2514337 +  -8.2  -4.09685   CGCGAGGGCTTGCTG                 GCCC CGG GGGC                 TTTTCCGCCCTCGGG  72 45
CXD91_RS12180 NONE
CXD91_RS12185 NONE
CXD91_RS12190 2517907 .. 2517933 + -13.6  -3.14132   CTTGGGCTTGATGGC         CAGCGCGCGGGC GAT GGCCACGCGCTG         TTGCTGGCCACCCGA  72 308
CXD91_RS12220 NONE
        bamC 2523952 .. 2523975 + -18.2  -5.78622   AGCGGCGCAAAAAAA          CCGGCAAGCC GCAA GGCTTGCCGG           TTTTTTTTGGCCTGG 100 66
CXD91_RS12245 2529531 .. 2529559 + -20.3  -3.61398   ACGACTGATGCCGGC        CTGCGCGGCGCGC GGC GCGCGTTGCGCAG        TTGTTGCACACGCAG 100 33
CXD91_RS12255 NONE
CXD91_RS12260 NONE
CXD91_RS12265 2534312 .. 2534326 +  -4.2  -3.14931   CGTTTGGAGTGTTTG               GCCATG CTG CATGGA               TTGATACCGAATCGC  45 52
CXD91_RS12270 NONE
CXD91_RS12275 NONE
CXD91_RS12280 NONE
CXD91_RS12285 2538001 .. 2538026 +  -8.2  -3.40403   CGTCCAGGCCGCGCA         GGC-GCCGCAG CGCAT CGGCGGCCGCC         TTGTCGTCCAGCGGC  61 483
CXD91_RS12295 2539102 .. 2539133 + -14.6  -3.02829   CTGCGCCCCAGGCGC      GCGAATGGCTGTAT GCCC ATACAGCCATTCGA       TCTTACCCGCCTCTG  74 50
CXD91_RS12300 NONE
CXD91_RS12305 2540780 .. 2540814 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 264
CXD91_RS12350 2553441 .. 2553473 +   -20  -2.64616   AGGCGCCTGCCCGTG     CGG-GTGCCTGTCCC CGCT GGGACAGGCACACCG      TCGTCTCCGTCCCCG  95 77
CXD91_RS12355 2555043 .. 2555077 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 201
CXD91_RS12390 2561308 .. 2561349 +  -2.1  -4.01411   AAGGCACAGTAAGCG TGCGGA-CGCGGCGATGCCG CGC CCGCATATCCACGATCCGGA TTTGAGTTTTTCGTA  56 29
CXD91_RS12395 2562759 .. 2562781 +  -9.8  -3.28712   TGGTGGCGTCGAGTT           CGAGCACGGT TTC GCCGTGCTGG           TTGTCCACCACCCAG  63 207
CXD91_RS12480 2576446 .. 2576476 + -19.6  -3.14344   TTTTCCATGCGGGCG       GGCGGCGCCGGGCG CCG CGCCGGTCGCCGCC       TTACTGCACCACCTG 100 79
CXD91_RS12495 2579637 .. 2579680 +  -9.4   -3.0127   TGAAACCGGGGACGC GCGCCTCACCCAGGCAGGGG AGCG CCGCTGCCTCGCTCAGGCGA TCTGTAATTCCCTCG  57 38
CXD91_RS12500 2581035 .. 2581083 +  -3.5  -3.39449   ACCAGCTGAGGCGCA CGACGCACGGCGCGCGCGCGGC CTTGCC GCGGCGCGCGCGAAG-GAGCCC TTCATGTTGCTCGGA  49 32
CXD91_RS12505 NONE
CXD91_RS12510 NONE
CXD91_RS12515 2583209 .. 2583229 +  -3.3  -3.35046   CGGACCGCCGGGCAA            CGGGTAT ATTGGGA ATATCCG            TCTTTCCGAGACTGC  46 59
CXD91_RS12520 2584039 .. 2584073 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 411
CXD91_RS12565 2591190 .. 2591207 +  -8.3  -4.13767   ATGCAACGAAAAAAA             CGGCGCC GCAA GGCACCG              TTTTGCCGTGCCACC  72 151
CXD91_RS12600 NONE
CXD91_RS12605 2599367 .. 2599377 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 383
CXD91_RS12615 2600461 .. 2600495 + -12.9  -2.61582   GGACACGATTGCGCC    CGTCGGCCTTGGCCTT GTAC AAGGCCAGGTCCG-CG     CTTCTGAATGCCCTG  62 105
CXD91_RS12660 2609773 .. 2609792 + -13.6   -5.5112   CGCCAGACATTGCAA            GCCCCTGA TCCG TCAGGGGC             TTTTTTCTTGGTCCC 100 36
CXD91_RS12665 NONE
CXD91_RS12670 NONE
CXD91_RS12675 NONE
CXD91_RS12680 NONE
CXD91_RS12685 NONE
CXD91_RS12690 2617154 .. 2617172 + -13.8  -2.61264   TCATCATGGAAGGCC             GCTGCCCG CTC CGGGCGGC             CTTGTCCATGGAGCC  69 111
CXD91_RS12695 2618409 .. 2618426 +  -7.7  -4.18197   GCCAAGGTCCAGGCA             CGCTGAA CATC TTCGGCG              TTTTCCATACGCACT  74 20
CXD91_RS12700 2620811 .. 2620836 +  -4.7  -5.29846   AAATACCCAGGAAAC         CCCTGTAGA ACCGAGCG TCTGCGGGG          TTTTTCTTTCGGGTT  93 107
CXD91_RS12705 2621743 .. 2621754 +  -3.6  -3.12668   CAGGCGCCGACGCCG                GCGT AAAT GCGC                 TTGGGTCTCCAGATG  45 85
CXD91_RS12715 2622996 .. 2623033 +  -9.8  -3.05384   CTGGCGCATAACGGC   CCGCGGGCCGGTCAGCC TTCCT GGCTGA-TGACCGGCGG   TTCGATCCAGAAAAA  60 30
CXD91_RS12725 2623905 .. 2623942 + -10.5  -2.59742   AAATTTGCCGCAACG   CAGCAAACGCCGGC-GTC CCG GACTGCGGGCGGTTGCGG   ATTGTCGCCATTGCG  57 153
CXD91_RS12730 2624395 .. 2624414 + -10.6  -5.40072   GCAAATCAATGAAAA            AGCCGCCC GGAT GGGCGGCC             TTTTTTTGCGGCACG 100 53
        trxB NONE
CXD91_RS12765 NONE
CXD91_RS12770 2632973 .. 2632983 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 77
CXD91_RS12775 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 2641680 .. 2641700 +  -6.7   -2.8655   CCTGGCGCTGGACCG            CCTGCGCTG AAG CGGCGCGCG            TATAGTATGCGTGCC  50 16
        kdpE 2645384 .. 2645418 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 203
CXD91_RS12840 2650879 .. 2650907 +  -5.8  -3.33261   TCTTGCGCACGTTGG        CCGTGGCCGCGC TGCCC GCGGCGCCACGC        TTGTAGGCCTTGAGC  52 186
CXD91_RS12855 2652667 .. 2652680 +  -9.5  -2.75183   TCCTTATCATGCCTC               GGCGC TGTC GCGCC                TCATTGACTGCCACT  55 87
CXD91_RS12860 NONE
CXD91_RS12865 2654902 .. 2654927 +  -7.5  -3.16881   GCACGAACCCCAGCT         TGCGGTGCAGCG CGA CGCTGC-CGGCG         TTGGTGGCGTCGATC  53 148
CXD91_RS12880 2658892 .. 2658921 + -22.3  -2.62616   GACATCCGCGACAGA       GTGTGCCTGTCCC CGCT GGGACAGGCACAC        TGCTCTACGCCATGA 100 97
CXD91_RS12920 NONE
        recN 2668916 .. 2668956 +  -2.3  -4.75776   ATTTACGAAAAATGT  CAAGGATCTTCAGGCGGGG AAA CGTCGCCTTCAGGCCCATG  TTTTTCAGTTCGCTT  76 453
        bamE NONE
CXD91_RS12940 2670729 .. 2670741 +  -4.7  -3.29144   TTGATCGATCAGCCA                GCCGG CGG CCAGC                TTGTAGCGGCCATCG  49 263
CXD91_RS12950 2671853 .. 2671874 + -14.5  -5.63236   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTTTTGCAT 100 37
CXD91_RS12995 2682445 .. 2682460 +  -3.2  -3.40403   CGCGACGCTATTCTC              GACTTC CCAC GAAGCC               TTGTCCTGCGAAGGG  48 53
CXD91_RS13000 NONE
CXD91_RS13005 2684954 .. 2684969 +    -4  -3.90588   CGCGCAGCGATACCC              CTTC-GG ATT CCAGAAG              TTTCATTACCCCATA  58 426
CXD91_RS13130 2710078 .. 2710110 +  -8.9  -4.07568   CCCGCCAGGAAGCGG      GCCTGCCGCGCGTAC GCG GCGCGGTCGGCGGGC      TTTTCGCCAAAGCGC  72 179
CXD91_RS13145 2712668 .. 2712718 +  -7.2   -4.0162   CCGAGTTTCGCGCCG CCGCAGCGCTCGCTGCTGGGCGAG ATC CTCGACTGGATGCTGGCGCCGCTG TTTCTCCTGTGGCCC  66 105
CXD91_RS13150 2714098 .. 2714113 +    -4  -3.71917   CCGGGCTGGTACGCG              CGATAG TTAC CTATTG               TTTCAAATTTAAGAT  54 61
CXD91_RS13155 2715946 .. 2715974 + -10.9  -4.60041   TGATAACCATCCCCC        GCCGGGTTGGACC GCT GCGCCAATCCGGC        TTTTTCAAGCTCCCT 100 38
CXD91_RS13200 2724762 .. 2724775 +  -9.5  -2.70932   CGAAGCCCTCTCCTA               GGCCC GCGC GGGCC                TGATTGCACAAGAAG  55 25
CXD91_RS13205 2726304 .. 2726326 + -19.2  -5.53288   TGCGTGCCCCGTACG           GGCCCGACAC GAT GTGTCGGGCC           TTTTTTTGCCTTGCG 100 243
        rdgC 2728016 .. 2728041 +  -6.7  -4.68724   GTAAATGACGTCCGC         GCCCGCCAGGCC CTC GGCCAG-CGTGC         TTTTCTGTTCGATCA  82 434
CXD91_RS13240 2731064 .. 2731111 + -21.2  -4.15788   CGATCCAGCGCCAGT GCGGCTGAGCATGCCGGCGGGC GCCT GCCGGCCGCCTTGCTCAGCCCC TTTCTTGAGCACGTT 100 18
CXD91_RS13260 2733579 .. 2733637 +  -2.2  -4.33153   CTGTCCACGCGCGCA C-GG-GCCGAGGAAGCGTGCCGGACTGCC CACG GGCAGCCCGGCGCGGA-CTACAGCTCCAG TTTGTTGATCTTGGC  65 78
CXD91_RS13270 2735593 .. 2735603 +  -6.8  -3.03159   AGCCCAATCAATGAC                 CGCT CGC AGCG                 TCTTGGGCGCGTTCG  51 121
CXD91_RS13315 2743008 .. 2743042 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS13325 2745392 .. 2745404 +  -3.4   -4.2349   CTGGACAAGTCCTTG                TTCC AGCGA GGAA                TTTTCGATCTGCGCG  63 69
CXD91_RS13335 2746795 .. 2746829 +  -2.1     -3.94   ATTGACAGTTCACAC    CTAG-CGTCC-ATGCCA GCT TGGCGTAGGACGTCCCG    TTGTTTACGGCTTGC  56 22
CXD91_RS13360 2750348 .. 2750382 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS13430 NONE
CXD91_RS13455 2769016 .. 2769060 +    -7  -3.67792   ACTGCTGGGCGCGCG CCACGCGCTCGGCATTCAGCC ACTT GG-TGACGGTCGTGCCCGTGG TTTCCCTGAATCTAC  64 358
CXD91_RS13465 2771066 .. 2771113 +  -8.4  -2.55544   AGGTCATCAGCAGCG CCATCGGCGTCACC-GTGACCTG GCC CAGCGCATAGTTGAAGCCGATGG TCACTTCCGTGATGA  51 224
        sulP 2776795 .. 2776810 +  -3.9  -3.54424   GCTGGCGAGCGGCCC              CGGCC CGGTCA GGCTG               TTTCCGGCGCTCACC  51 379
CXD91_RS13555 2789352 .. 2789365 +  -4.5  -3.54459   CGGTGGCAGGCCGTC               GCCAGG ATT CC-GGC               TTTGCGACGACTTGG  52 57
CXD91_RS13585 2795374 .. 2795395 +  -2.9  -2.65264   AGGCGGTAGGTGGCG           GCGAGCCAGT ACG AC-GGCATGC           TGCTGTGCGTGGTCG  39 47
CXD91_RS13630 2806221 .. 2806238 +  -4.1  -4.31943   TCCCGCCGCCCGCCA             TGAACCG GGGA CGCTTCA              TCTTTTTTCTGTACC  68 42
CXD91_RS13635 2807017 .. 2807040 + -16.7   -3.0806   CCGGGCCCGCGCGCC          GGCGGCGCG GATCGG CGCGCCGCC           TCTTGCGGATTTCGC  81 48
CXD91_RS13640 2808327 .. 2808337 +  -2.4   -4.4078   CATACGCGATGGTCT                 GGCC CTG GGGC                 TTTTCGTTGGCCAGC  68 83
CXD91_RS13670 2815205 .. 2815228 +  -2.2  -4.07568   CGGCAGGCGCCGCCG          CGGCCTGAGC GCCT GCCCAGCCCC           TTTTCCCGCCCCGAA  58 18
CXD91_RS13675 NONE
CXD91_RS13680 2817921 .. 2817946 + -13.3  -2.57132   CCTGGCGATCCTGCA         CGATGTGCCGC GTCA GCGGCGTATCG          ATTATCCCGGGCGCC  66 269
CXD91_RS13710 NONE
CXD91_RS13715 2824311 .. 2824348 +  -2.5  -4.58395   CGGCACGAGGCCGCG   GCCG-TCAATTCGCGCGG ATC CCGCGCTCGTCGATCAGC   TTTTTCCAGCGTGCG  70 112
CXD91_RS13730 2827488 .. 2827530 +  -3.9  -3.84406   GGCCGAATTAGCGCG CG-CCCGCCAGCCTGCCTGG CCGG CCAGCCAGGGGCGCGGATCG TTGTTGTCATAGCGG  58 339
        queE 2829586 .. 2829608 +  -4.8  -3.64703   CCATGACTGTCCGTC           CCATCGCG GGAGATG CGCGATGA           TTTCCGTCACCCGCC  55 35
        queD 2830289 .. 2830313 +  -7.8  -3.31792   CTTGGCGCCCTGCCC         CA-CCAGGCGC TTGA GCGCCGGGATG          TTGTGGGCGTCGTAC  55 266
CXD91_RS13770 NONE
CXD91_RS13775 2833552 .. 2833569 + -11.3   -4.1822   GCGCTCCAAGGCGGT             GTACCGC CTGG GCGGTAC              TTTCTTCGGCTCGGC  89 192
CXD91_RS13790 2835878 .. 2835905 +  -5.5  -2.53263   TGCACGCGGCCCTGC        CCGGCGGTCGAC ACCAG GTCGG-CGCCGA        TCAATTGCGCATCGC  42 428
CXD91_RS13805 NONE
CXD91_RS13810 NONE
CXD91_RS13815 NONE
CXD91_RS13820 NONE
CXD91_RS13825 2852031 .. 2852045 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 128
CXD91_RS13835 2853817 .. 2853863 + -12.1  -3.35679   GCAACGCCGGCCATG GCGGCCGGCGTTGCGCCCTGCG AACC CGCCGCGATCAGCG-CGGCCGC TTGTCGATGACGCGC  73 45
        paaX 2864554 .. 2864579 +  -4.6  -3.62597   GCGCCTGCAGCAGCG         TGGCCGCCAC CAGCGC GTCGCCGCCA          TTGTTGCCCGGTCCG  54 497
CXD91_RS13910 NONE
        rsgA 2867559 .. 2867583 +  -4.3  -3.78419   GTCCCCACGAGGACA         GGCACCTGCCG ACTCC CGG--GGTGCC         TTGTATCTTTCCTCC  58 56
CXD91_RS13945 2874051 .. 2874103 +  -7.4  -3.36054   GGGCAAGACCACCGC GTGCGGCCTGCTGGCGCAGGCC GACCCGCAG GGCCTGCACCTGCCGTCCGACC TGTTCTATGGCTTTC  59 151
CXD91_RS13965 2877888 .. 2877915 + -11.2  -3.77119   CGCGCGCGGCGTGAT        GCGGGGCCCGGGC GGG GCCTG-GCGCCGC        TTGTATTCGTTGATG  74 501
        argH 2882391 .. 2882408 +  -9.8  -4.65895   CGCTCCATGTAAAAA             CCCGGC CTGCGC GCCGGG              TTTTTACATGCCGCG  93 49
CXD91_RS14000 2885300 .. 2885310 +  -8.2  -2.80622   CCGCGATTTCCGGCC                 GCGC GCC GCGC                 TATGATCGACTATCT  52 10
        moaA 2886770 .. 2886780 +  -4.6  -3.05384   TCCTCGCGGCTGTCC                 TGGC GTG GCCG                 TTCGGTGCGCAGCGG  46 372
CXD91_RS14035 NONE
CXD91_RS14040 2893992 .. 2894010 + -13.8  -3.05463   TCGGCCAGCACGGCC             TGGCGGCG TAG CGCCGCCG             TTCAGTCGGCGGGCT  72 15
CXD91_RS14050 2895181 .. 2895196 +  -4.6  -3.14404   CGCCGCCACCATGCT              GGCCCA GGCC TGAGCC               TTACGTAGTTGCTGT  47 13
CXD91_RS14055 2896703 .. 2896738 + -13.2  -3.00298   AGCGACTGCCGCGGC    AAAGGGAGCCTGTCCC CGCT GGGACAGGCTCCCGGG     TATGTAGTTACCACG  70 57
CXD91_RS14070 NONE
CXD91_RS14075 2900351 .. 2900369 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 297
        cadR 2904366 .. 2904376 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS14095 2905359 .. 2905398 +  -9.4   -3.5361   CCTGGACAAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD91_RS14100 2906533 .. 2906547 +  -2.7  -3.57144   CTTGCTCGGTCATGT               AGGCC GACAG GGCCA               TTTCCAGCTGCAGGG  50 129
CXD91_RS14140 2914624 .. 2914658 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS14160 2918734 .. 2918744 +  -6.8  -3.40878   CGCGCTGTCGGGCAC                 GCTC ACC GAGC                 TCTTGTTCGCCTCGT  56 335
CXD91_RS14180 2925079 .. 2925099 +  -8.1  -2.62263   GATCGTGCAGCATCT            CGCGGGCCG GGC CGGACAGCG            TGATCTCGCCCGACT  48 139
CXD91_RS14255 2949498 .. 2949518 + -15.4  -5.13343   GTCGTTATTATTTGA            GGCGGGGC TGCAT GCCCCGCC            TTTTATTTTGCATTG 100 92
CXD91_RS14260 2950100 .. 2950115 + -10.4  -4.62069   CCAGAACGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTGCCATGCCGG  93 81
CXD91_RS14290 NONE
CXD91_RS14295 NONE
CXD91_RS14300 2958499 .. 2958525 +   -15  -3.60865   ACCCTGACCCGGCCG         CGCCGGCGCCGC CCC GCGCAGCCGGCG         TTCTGCTTTAGAATC  81 34
CXD91_RS14305 NONE
CXD91_RS14310 2959591 .. 2959607 +  -2.1  -2.64099   AAACAAACCCATCAG              GAGCCCC CAT GCGTCTC              ATTCTGCTCGGACCG  38 108
CXD91_RS14315 2960261 .. 2960319 + -13.8  -3.39895   GCAGAGCTAAACCGC GCCGCG-AGGCCGCCGCGCCGCCCGCGCA GGGG TGCGCGGCCG-CGCG-CGCCCTGCCCGCC TTCATTGCTAGCCAA  77 31
CXD91_RS14320 2961116 .. 2961144 + -18.2  -2.84602   AGTAATCCCTCCCCC        CGACGTGCCGGC TCGAT GCCGGCACGTTG        CTTTGGTACCCTGGC  86 36
        murJ 2962772 .. 2962804 +   -12  -4.20516   AATAGTGAAAATCAC      AACAAAGACCGGCC CTTAC GGCCGGTCTTTGCA      TTTATTGGATCGACA  91 65
CXD91_RS14330 2963986 .. 2964009 +  -6.8  -3.58037   GGGCTTGCAATCCCC          GTCGGAC-TTG ATA CAATGTCTGAC          TTTGCCGAATTCATA  58 74
CXD91_RS14335 2964345 .. 2964362 + -11.3  -5.45802   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC 100 69
CXD91_RS14355 2967053 .. 2967063 +  -2.4   -3.7941   AGCCGATATTGCCGT                 TGGC GCC GCCC                 TTGTTCTCCACGATG  54 342
CXD91_RS14400 NONE
CXD91_RS14405 2976903 .. 2976915 +  -3.3  -3.07233   AAGCCGCCAAGAGCA                TCGGC TAA GCCTA                TATTGCCCATTGTCA  42 18
CXD91_RS14410 2978688 .. 2978707 + -13.6  -5.40072   CCACCCATGCCGGAA            GAAGGCCC TGCG GGGCCTTC             TTTTTTTGCCCGGCG 100 44
        pdxA NONE
CXD91_RS14420 2981233 .. 2981263 + -11.1  -3.06183   CCAGCTGCCCGCACT      G-GCGCGCCAGGCGC CGC GCG-CGGGCGCGCAC      TTCCATCGAGCTGAG  62 459
CXD91_RS14480 2991128 .. 2991146 +  -5.8  -3.14931   CCTTGCCCGGGCCCG             GCGCTGCC ATC GGCCACGC             TTGCTAACGCCTCGA  49 98
CXD91_RS14485 NONE
CXD91_RS14490 2993701 .. 2993735 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
CXD91_RS14515 2999065 .. 2999083 +   -11  -3.55444   ATTTCGCCCATGCGG             CGCTCGAT CAG GTCGAGCG             TTTCCAGCGTGAAGG  71 424
CXD91_RS14525 3001795 .. 3001829 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS14550 3008133 .. 3008174 + -26.8  -3.54903   GGCGCGTTCCCTTCC GACCCGATGCGTCGCCGGC CCGTT GCCGGC-ACGCATCGGGTC TTATCCATTTTATAT 100 62
CXD91_RS14555 NONE
CXD91_RS14560 3009958 .. 3009973 +  -3.3  -4.28548   GCATGTCGCACCGCT              GAATC CCGCAC GATTC               TTTTCATCACTCCGT  63 24
CXD91_RS14565 3010847 .. 3010872 + -20.5  -4.56597   CCGGGCCTGCATCCC         GCCAAGCCGCC CTCG GGCGGCTTGGC          TTTTTCACCCGGCCG 100 68
CXD91_RS14570 3011042 .. 3011087 +   -28  -5.84381   AGGCCAGCAACAAGG CCAGCAAGAAAAAAGCCGCT CATGGA AGCGGCTTTTTTCTTGCTGG TTTTTTTCTTGCTGG 100 58
CXD91_RS14575 3012279 .. 3012291 +  -3.3  -4.11216   ACCTATTGACAGTTC                ACAGC TAA GCTGG                TTTTCCGAGTCGCGC  59 18
CXD91_RS14580 3013492 .. 3013509 +  -5.5  -3.29144   CTGGCCGACGCCACG             CGACTCT ACGA AGAGGCG              TTCTGACGCCGCTGG  51 2
CXD91_RS14620 3019664 .. 3019692 +    -3  -3.30441   AGAAACTGCGAAACT       CTCGCCGC-GCAC AATT GTGCCGTGCCGCG        TTGTCCCCAATACTC  46 101
CXD91_RS14625 NONE
CXD91_RS14630 NONE
CXD91_RS14635 NONE
CXD91_RS14640 NONE
CXD91_RS14645 NONE
CXD91_RS14650 3024519 .. 3024558 +  -6.5  -3.17075   GATGCGCAAGGCGCA GG-CGTGCGATGGCCTGTA TTCG TAC-GGCCATGTCACGGCC  TTGCCTTACGAGCCG  51 275
CXD91_RS14660 3026566 .. 3026576 +  -5.4  -3.25823   CGTTTTCCGAGCTGG                 CTTC CAT GAAG                 TTCATATAGACAGGC  51 6
CXD91_RS14665 NONE
CXD91_RS14670 3028669 .. 3028695 + -10.9  -4.52857   GGCCGCGACGGCTGG        CGCGCCAGGACG AGGC TGTCCTGGC-CG         TTTTCTATGACACGT  95 46
        soxR NONE
CXD91_RS14685 3030348 .. 3030373 +  -5.4  -3.34398   CGTAAGGCAGTATTG         CCGGCTGTATC CCGAT GGTGC-GCCGG         TCTTTGCGCCCGCGC  51 57
CXD91_RS14690 3032735 .. 3032769 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS14705 3035199 .. 3035215 +  -4.3  -3.14132   GACAGGCAGCAATCG              CCGGGCT GTT AGCTCAG              TTGGTAGAGCAGCGG  47 140
CXD91_RS14710 3035287 .. 3035316 + -17.3   -5.0925   CACCATGATTTGTAA       GGCCGTTAGTGAT AGTA GTCACTAACGGCC        TTTTTGCTTTTCGGC 100 36
CXD91_RS14755 NONE
CXD91_RS14760 3042170 .. 3042186 +  -5.8  -3.05596   GAATACGTGATCAGC             GGCGCGG CCGG CC-CGCC              TTCGCTCAGGGCATG  48 332
        panB 3043959 .. 3043974 +  -3.2  -4.07568   TCCTGCAAACCCGCT              CCC-GCG CGC CGTAGGG              TTTTCGCCACAGGCA  59 253
CXD91_RS14775 3045584 .. 3045618 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 256
CXD91_RS14805 3051500 .. 3051519 +   -10  -3.33261   GCACGCTGGCGATGG            CGTCGGCGG CCA CCGCC-ACG            TTGTCGCGGTTCAGG  63 72
CXD91_RS14835 NONE
CXD91_RS14840 NONE
CXD91_RS14845 3060247 .. 3060267 +  -8.9  -3.46602   TTGTACCGAGTAACC            TTGCGCGGG CCG CCTGCGCCA            TTGTGATGTCCACGG  60 84
CXD91_RS14855 NONE
CXD91_RS14860 3063173 .. 3063195 +  -6.9  -3.35679   AGGCATCGACCAGCA           GGCCCTGGT AACGC GCCACGGCC           TTGTGCGTCACGCCG  52 304
CXD91_RS14870 NONE
CXD91_RS14875 3066350 .. 3066372 +  -5.4   -3.7941   ACGAGCTGACGTCGT           GCAGGTCGGC GAT GCGGATCAGC           TTCTTGTAGACCGTG  58 115
CXD91_RS14890 3069233 .. 3069263 +  -6.8  -3.39784   TGGCGCACCAGGCTG      GGGCCGAGCGTGC CGGGAT GC-TGCTCGGCCA       TGTTCTTCAGGCTCC  55 431
        gcvA 3073740 .. 3073782 + -10.5  -3.56092   GGCAGCGTGAGCGCC GCGGCGGCCTGCGCGATGGT CATG GCCACCAT-CAGGTCGCCGC TTTGCGCGATGCTCC  67 412
CXD91_RS14930 3076840 .. 3076878 +  -9.6  -3.14132   CGGATCGGCGATGCC G-CCGACCGCGCGCACCGG CATG CCGGTGCG-GCGG-CGCAC  TTGCTCGGCCAGGCC  59 213
CXD91_RS14940 NONE
CXD91_RS14985 3086090 .. 3086122 +  -3.4  -2.78463   CCACTTCGGCCGGCT     CCATCAGCCGGTC GAACGGCA GGCCG-CTGAGGG      TCTCCTGCCAGCGGT  40 172
CXD91_RS15035 NONE
CXD91_RS15040 3094648 .. 3094658 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 64
CXD91_RS15045 3095800 .. 3095820 +  -2.4  -2.59267   GCCCAGCGTCGAGAT            CAGCACGA CGTAA TCGGGCAG            CTTGGTGTCCTTGCC  38 163
CXD91_RS15060 NONE
CXD91_RS15065 3099166 .. 3099181 + -10.4  -5.86332   ACGAACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTGCCTTGC 100 58
CXD91_RS15080 3101910 .. 3101929 +   -15   -4.8622   GCGTGCAATGAAAAA            GGCGGCTC GCAT GAGCCGCC             TTTTTCATTGCCGGC 100 49
CXD91_RS15100 NONE
CXD91_RS15105 3107097 .. 3107125 + -14.6  -5.40072   GCCCGCCATGCAGCC       GCCCCGTTGGACG ACCA CG-CCAGCGGGGC        TTTTTTTCGCCGGCC 100 78
CXD91_RS15110 3108623 .. 3108651 +  -5.2  -3.36569   GCGCACCATGGGCGT       CGTCG-CCGTCGC CCTG GCGGCGGTCAATG        TATTTGGCGGCTTCC  53 231
CXD91_RS15120 3110479 .. 3110491 +  -4.7  -3.55622   TCCAGGCTCCAGGCA                TCGGC CTC GCCGC                TTTCCAGCAGTTCCC  54 334
CXD91_RS15130 3113597 .. 3113607 +  -6.8  -3.31144   CCTATTACGCCACGG                 CGAC GGT GTCG                 TTCTGACCATGGCGA  54 9
CXD91_RS15135 3114991 .. 3115007 +    -5  -3.15544   ACTCCTTCACCATGG              CGCCGC AACCC GAGGCG              TTCATGACGATGGCC  47 489
CXD91_RS15160 3133225 .. 3133262 + -16.4  -3.61398   GCGAGGCGGCCTTGA   TGGCATCGACGGCGAT CTTCAC ATTGCCGTCGGTGCCG    TTCTTGAAACCGACA  85 523
CXD91_RS15180 3136900 .. 3136921 + -18.7  -5.06414   TTCGTCCCGGAATGC           CGGCGCGCC TCAA GGCGCGCCG            TTTTTATTGCGCCAC 100 49
CXD91_RS15210 3141139 .. 3141155 +  -5.7   -3.4277   GCTGGTACATGAACC              CGTGGTC CTT GGCCTCG              TTGTAGGTCTTGCCT  55 128
        chrA 3143952 .. 3143973 +  -3.6  -4.11216   CGGATCGTCGTAGAC           GACGC-GCC ATACC GGCAGCGGC           TTTTCCACGTGGCCC  63 280
CXD91_RS15245 NONE
CXD91_RS15250 NONE
CXD91_RS15255 NONE
CXD91_RS15260 3150984 .. 3151003 +  -2.8  -3.23216   TTCAGCGTCGTCGAC            GCCAT-GCC CGA GGCTATGCC            TTGCTCGTGGTGCGC  46 280
CXD91_RS15270 3152715 .. 3152736 + -18.7  -3.28712   CGCCACAAACGACAA           CCCCCCGGG CAAG CCCGGGGGG            TTGTCGGCGAACCAA  93 70
CXD91_RS15325 3164083 .. 3164094 +  -5.8  -3.01712   GGGTACGGAAGCGGC                TGGC GATG GCCA                 TCTTGGCGCGCGGCC  48 303
CXD91_RS15335 3166391 .. 3166401 +  -4.6   -4.0371   AGGTCCACCATGGCC                 GGCG CCG TGCC                 TTTGTATGGAACATG  63 455
CXD91_RS15365 3170015 .. 3170043 +  -5.3  -3.87373   GCACATTTGGACAAT       TCATTGCGCCCG CCATGA TGGGCGC-ATGG        TTTATCCGCGCTGTC  60 141
CXD91_RS15375 3172261 .. 3172275 +  -3.5  -3.72576   GCGCGCAGGGCCGCT               TCGAC CTGAT GTCGG               TTTGCTCGGGCGCGC  54 348
CXD91_RS15405 3178217 .. 3178231 +  -3.5  -3.94746   GAATGTGCCGGAGGG              CGC-GC ACGC GCAGCG               TTTGCTTGAATCTCA  59 63
CXD91_RS15410 NONE
CXD91_RS15415 3181069 .. 3181083 +  -4.2  -3.14931   GTCGAGCACGGTGTC               GTCGTC GTT GACCAC               TTCATCGAACGTGAA  45 266
CXD91_RS15455 NONE
CXD91_RS15460 3188778 .. 3188789 +  -5.8  -3.78022   CTTCAGTAGCGGTCC                CAGG CCTT CCTG                 TTTCATCCCTCTACC  60 183
CXD91_RS15470 NONE
CXD91_RS15475 NONE
CXD91_RS15480 3192374 .. 3192389 +  -8.2  -3.53444   AGCCGCCGCGCCTCG              GCGTGG ATAT CCGCGC               TTTCGAACGCGGTGA  61 167
CXD91_RS15500 NONE
CXD91_RS15505 NONE
CXD91_RS15510 3197862 .. 3197898 +  -5.1  -3.02144   CGTCATCAGTGTCAG    CATCGGCCGGTTGGT CGACAGC ACCAGCCCGTCTATG    TATTCCAGCCCCTGC  46 127
CXD91_RS15520 3201959 .. 3201987 +  -4.4   -3.2614   AGGCCACCGCGGTGC       CGCG-CGCGGCCG GCAC CATCTGCGTCGCG        TTGGTCTGCAAGGTG  47 226
CXD91_RS15545 3207827 .. 3207862 +   -24  -3.73224   ATTCAGAGCGATCAC    TTCGGCGGGCGCGCCT TGCA GGGCGCGCCCGCCGCA     TTTGGTAACAACTAA 100 47
CXD91_RS15550 NONE
CXD91_RS15555 3212372 .. 3212423 + -18.2  -2.83677   AGGCCGCCTATCGGC GCCATTTGAAATGGCTCGCGCCGAC GAG GTTG-CGGGGGCCATATCAAATGGC TGTGCTGAATTCATT  86 141
CXD91_RS15560 3213133 .. 3213155 + -20.6  -4.65895   TTAGCAGCACCTTAA           GCCGCCTGGC TCC GCCAGGCGGC           TTTTTCCGTCCCGCG 100 57
CXD91_RS15565 3214080 .. 3214117 + -12.5  -2.64155   GCAGCACGGCGCAGG   CGCCGCCCGCCACGCCC GGCA GGGCATGCAGGGCCGCG    TCGATTTCCGCCAGC  62 290
         mpl NONE
CXD91_RS15640 3226979 .. 3226994 +  -2.4  -2.64354   GGGGCGCTCCTGACG              CCGCCG CGCC CGATGG               ATTCTCACTATGTAC  38 72
CXD91_RS15645 3228923 .. 3228942 +  -2.7  -2.76468   CGCCCTAAAATGCAC            GGGTGCG ACGCTC CGCTTCC             TCCTCTTCGATCCTG  40 61
CXD91_RS15650 NONE
CXD91_RS15655 3230719 .. 3230729 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS15660 NONE
CXD91_RS15665 3232639 .. 3232662 +  -5.2  -3.28712   CAGCATCCGCCACGG          TCCAGGCC GAACACCA GGCCCGGA           TTGTCGGGCGAGCCG  49 374
CXD91_RS15690 3236655 .. 3236676 +  -9.3   -4.1891   GTCGCTCAGGCGCTT           GTCGCCGGC CACC GCCAGCGGC            TTTATCTTGCCGGCC  75 332
CXD91_RS15715 3242982 .. 3243010 +  -8.7  -3.51032   GCGGCTTGCCCAGCA        GATACAGGTCGCC GAT GGCGTCCAGGATC        TTGTGCTTCACGAAT  61 307
CXD91_RS15800 3264137 .. 3264147 +  -4.6  -3.30771   CGCCGCCCGTGAAAA                 TCGC ATT GCGG                 TTGTAGAGCATGTGC  49 481
CXD91_RS15815 3266436 .. 3266448 +  -7.7  -2.54523   GATCGGGCCAAAGGG                CGTAC GGC GTACG                TCCCTTCCCGTCTCA  50 43
        hppD 3275626 .. 3275646 +   -14  -3.60151   GCCTGGCGCGAGTAA            GGCCCACC CTCGC GGTGGGCC            TTGTCATTTCGGGCG  78 46
CXD91_RS15875 3279528 .. 3279540 +  -9.1  -3.18681   GAGCACGACCTCGCC                CTGGC CGC GCCAG                TTGATGACCTTGCCC  59 384
CXD91_RS15885 3281252 .. 3281265 +  -5.2  -3.21099   TGCATGAATACTGCG               CGCG AGTTAC CGCG                TTGATGCTAGAGCAG  49 450
CXD91_RS15905 3283421 .. 3283436 +  -6.1  -5.24129   TACAGAAAACCAAAC              GGCAC CACCAA GTGCC               TTTTTTGTGCCCGCC  90 220
CXD91_RS15910 3283985 .. 3283999 +  -4.2  -2.94411   GCATGAACTAAGGAG               ACCATG AAT CATGGA               ATTGTTTGACAACCT  44 30
CXD91_RS15915 3285538 .. 3285555 + -14.1  -6.11644   GCCGGCCGGCGCGAA             CCGGGCC CTCG GGCCCGG              TTTTTTTTTGCCTCG 100 63
CXD91_RS15920 NONE
CXD91_RS15925 3288326 .. 3288365 + -26.5  -3.05384   CTGCGCGACTGAGGC  CGCGGCGCCGGCCGCTCG CAGCC CGGGCGGCCGGCGCC-CG  TTCGATCAGGCCGCC 100 29
CXD91_RS15955 3292373 .. 3292395 +  -6.8  -2.53911   GAATGCCAGTTCGGC           CAGCCGGCGG ATG CCGTCGTCGG           TGAATTCCAGCTTCA  44 243
CXD91_RS15985 NONE
CXD91_RS15990 NONE
CXD91_RS15995 3299580 .. 3299636 +  -7.8  -2.91264   AACTCGCCGCCGCCT TGCGGCCCTG-AC-GGCGCTGGGCGCGC TGT GGGCGGCCGGCGCCGGTGCGCATCCGCA TATGTGGATCGACGC  52 15
CXD91_RS16000 NONE
CXD91_RS16005 3301209 .. 3301221 +  -4.7  -3.23637   GACGAATTTTGCACG                CCCGG GTG CCGGA                TTCAATTGATATGTT  49 56
CXD91_RS16010 3303705 .. 3303728 +    -3  -3.85698   GGCGCCGGCGGCAGC          CAGTTGCGGG CGCG CCTGCAACCA           TTTGTCCAGCGCGGC  56 362
CXD91_RS16040 3309260 .. 3309278 + -17.4   -4.4078   TCCCGTGTCGCGAAA             CGCCCCGC CTG GCGGGGCG             TTTTGCTTGGCCGCG 100 48
CXD91_RS16045 3309601 .. 3309615 +    -7  -3.08371   GCAACAACTACTGAG               GGGCGC ACG GCGGCC               TGTCTTGGCCATGTC  52 27
CXD91_RS16050 3310917 .. 3310950 +    -6  -3.34005   ATGAAGCGGGAAAGG     CGAGTACGCGCCGTG CGGAT CATGGTGC-TACGCG     TTGTCCGGCTTCATT  53 223
CXD91_RS16055 NONE
CXD91_RS16060 NONE
        metF 3313700 .. 3313710 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS16070 3314830 .. 3314842 +  -6.2  -3.01924   GAAGCGCTCGAACGC                GGCC AGAAA GGCC                TGTTCGGCGGCGCTC  48 141
CXD91_RS16095 NONE
CXD91_RS16100 3322465 .. 3322485 +    -4  -3.57561   CAAGGGTTCGGGCAT           GTCGC-GGCC CAC GGCCAGC-AC           TTTGAACAGTTCGCC  51 94
CXD91_RS16120 3327746 .. 3327785 + -15.6  -2.64099   TATCCGGGCCGCCCG  CGCGCGGGCGGCC-GCGCT GCT GGCGCTGGCCGGCTGCGCC  ATTCTGCTGGGAGCC  74 277
CXD91_RS16125 3329264 .. 3329277 +  -3.7  -2.62263   GCTGTTCTCGCTGCT               GCCGC TCGA GCCGC                TGCTGTAGGCGCGCT  40 4
CXD91_RS16150 3333888 .. 3333930 + -11.9  -3.18681   CCAGTTCGGCCTGGA CCTGC-GCACGGGTGGC-GGC GTC GCCGGCCGGCCGGGCCGCGGG TTCCTGCGCTTCGCC  64 354
CXD91_RS16225 NONE
CXD91_RS16230 3346741 .. 3346755 +  -3.4  -3.96327   GCAGAAATTCATGGC               GGCCTG CGC CCGGTC               TTTCTCCTCGACCGT  58 202
CXD91_RS16240 NONE
CXD91_RS16245 3350121 .. 3350155 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 280
CXD91_RS16265 3356109 .. 3356146 +  -7.6  -3.03124   GTGGCTGAACCGGAA   CGGCGAGGTTG-CGGCC GGCTG GGCGGGCAACCAAGCCG   TGTTCAAGAATCAGC  53 33
CXD91_RS16270 3358758 .. 3358794 + -12.9  -2.72144   TTTGATGCCCAAGGG    CTGGCGCAGTCCGCCAG GCG CTGGCGGACGGTCCTGG    GTTTCGAAAGAATCG  67 73
CXD91_RS16280 3360227 .. 3360241 +  -4.9  -2.88249   ACACCGCTGCCTGGC               GTGGC CGAGT GCCGC               TATGTGACCAATATC  44 173
CXD91_RS16385 NONE
CXD91_RS16390 3384721 .. 3384731 +  -8.2  -3.53012   CGCATCGATGGGCCC                 GGCC GGC GGCC                 TTTGCGCCGGCCGCG  62 50
CXD91_RS16395 NONE
CXD91_RS16400 3386862 .. 3386872 +  -6.8  -3.85817   AAATGCGGGGCGGCG                 CTGG CCG CCAG                 TTTCTGCGGCACCGT  63 189
CXD91_RS16410 3389164 .. 3389174 +  -2.4  -4.19238   CGCCGTTGGGCATTG                 CGGC CCG GCCA                 TTTTCCGATTCAAAA  62 92
        fahA 3390602 .. 3390629 + -21.4   -4.8622   CTCCGGCTTGCCGAA        GGTGCCTGTCCC AACC GGGACAGGCACC         TTTTTCCTTGCGGGC 100 108
CXD91_RS16445 NONE
CXD91_RS16450 3400565 .. 3400595 +  -3.9  -2.57132   CGCGCTGGCGCAGCA       GGCGCGCGG CCTCGACGAATTC CCGCACGCC       CTTGTCGCGCAGCAG  40 506
CXD91_RS16505 NONE
CXD91_RS16510 NONE
CXD91_RS16515 3415336 .. 3415354 +  -4.4  -2.62184   CCCTCGCGGATGACC             TGGTGCAC CAC GCGCTCCA             TGATCTCGGGCGAGG  40 362
CXD91_RS16525 3418398 .. 3418431 +  -5.1  -3.21099   GATGGTGCCGTGCTG     GATGTTCCCGGTGGC GCTG GCCTGCGGCAACACC      TTCGTGCTCAAGCCG  49 495
CXD91_RS16535 3421292 .. 3421312 +  -3.8  -3.11459   AGGGCGGGCCTGGCC            CGCCCGCG CAACC CGAGGGAG            TTCCATGCTGGTATT  45 46
CXD91_RS16540 NONE
CXD91_RS16545 3423414 .. 3423467 + -15.3  -3.01712   TGGGCGAGGACATCG TCACGGCCA-GCGCGCGGCG-GCGG CGCGAA CTGCGCGCCACGCGCATGGCCATGG TGTTCCAGGAGCCCA  77 291
CXD91_RS16555 3426246 .. 3426256 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS16560 3427490 .. 3427506 +  -2.1  -4.62783   CTTTTAGCCAGTTTC              CGGATGA ATT TCCGCCG              TTTTTCGGCTACGTC  70 255
CXD91_RS16610 3434692 .. 3434732 +   -14  -2.80816   ACCTTGCTGGACCGC GCCTGGGGGCTGGAGGCGC ATTC GCGCCTG-AGCTGCCAGGC  TATCGTGGCTGGCGA  71 268
CXD91_RS16635 NONE
CXD91_RS16640 NONE
CXD91_RS16645 NONE
CXD91_RS16650 3441546 .. 3441573 +  -8.2  -3.78775   ATGACCTTGTCGGCG        TCCTCGCCCGCC AGCG GGCGGCCGCGGC         TTTGCTGGTGGCGCA  67 131
CXD91_RS16725 NONE
CXD91_RS16730 NONE
CXD91_RS16735 3459084 .. 3459098 +  -7.8  -3.30771   GGCCTGGCCATGGCG               CAGGTC GAC GGCCTG               TTCTGCGCCATGTCC  56 163
CXD91_RS16745 NONE
CXD91_RS16750 3462239 .. 3462273 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS16765 3466551 .. 3466573 +  -4.8  -4.67982   GGCCTTATCCGTCTG           GCAGGTCATG GGG TATGGCCTGG           TTTTCTTCGGTGGCA  75 224
CXD91_RS16775 3468643 .. 3468666 + -13.8  -2.54702   TGGGTGCGCACCGGC          GCGCGCTGGC GGTG GCCAGCGAGC           TGCCTTCGCGTCTGT  69 511
CXD91_RS16790 3471306 .. 3471316 +  -8.2  -3.53012   GTGTGGATGGTGACG                 CGGC ACG GCCG                 TTTCAGCGCCCGCAG  61 275
        gloB NONE
CXD91_RS16810 3474613 .. 3474638 +  -3.3  -2.71712   GCGCCCGTCCGCCAA         GCCGCTA AAATTCCTACAA TAGCGGC          CTTTCCGCAAGGCAA  40 64
        fabI 3475486 .. 3475514 +    -6  -3.78419   CCCCGTAGGGGGACT        GGCACCGG CCAAATTCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 57
CXD91_RS16820 3476741 .. 3476770 + -17.9  -2.62616   CTGTCCCCGCAGGGA       GGGTGCCTGTCCC CGCC GGGACAGGCACAC        TGCTGTACGCCATCG  85 56
CXD91_RS16830 3478463 .. 3478496 +  -8.9  -3.53091   CCTCGATACGGCACG     TGCTGCAACCAGGC GCCGCTG GCCTGGC-GCAGCA     TTTCGCCGGCCAGGT  61 460
CXD91_RS16850 3482234 .. 3482244 +  -4.6  -4.12188   AGACCGTGTGGGGCA                 TCGG CTA CCGG                 TTTTCGCCCTGATGA  62 3
CXD91_RS16855 3483683 .. 3483735 + -14.1  -3.33696   TGCGAAGGCTTGACC CGCCGGCCG-CGCCG-TC-AGGCGCC CGGC GGCGGCAAGAGCGGCACCGGCCGGCG TTCCTTGCCGAACAC  75 28
CXD91_RS16870 3488029 .. 3488066 + -16.9  -3.18274   CCCGACAATCCGCTG   TCGCCGGCCGCC-CTCCG CTT CGGGCCGGCGGCCGGCGC   TTCCATTCCAATCCA  84 85
        minC 3489021 .. 3489039 +  -2.4  -3.86346   GCCTTCATACGCTTT             TTGCTTTA CGA TAACGCGA             TTTGTACGCACATAA  54 87
        minD NONE
        minE 3490308 .. 3490326 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 191
CXD91_RS16935 3500640 .. 3500659 + -10.6  -5.50499   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTACCTGTAA 100 49
        uvrA NONE
CXD91_RS16950 NONE
CXD91_RS16955 3508715 .. 3508757 + -14.1  -3.07935   AGGTGCAATACCACT GACT-CCGGTGCCTGTCCCC GCAG GGGGACTGGCACCGGCAAAC TTCCGTGCCTGCCGT  72 24
CXD91_RS16960 3510416 .. 3510431 +  -2.4  -3.01712   CCGGGCTTGCCCAGC              GCGGCG CGGC TGCCGA               TATTGACGACCCGCC  41 437
CXD91_RS16975 3513509 .. 3513543 +  -5.4  -3.53811   GCCTTGCTCGCCGCC     GCGCCTGCCGCCTGAC CAT GTCCGCCGCCCGGCTC     TTTGCCCGCAGTCCC  54 11
CXD91_RS16980 3514762 .. 3514786 +  -9.1  -3.01712   GCTTCGGACAGGTCG          CCGGCGCGCAG CGC CAGCGGGTCGG          TCTTGCCGCCGGCGC  55 524
CXD91_RS16990 NONE
CXD91_RS16995 3517463 .. 3517480 +  -2.6  -3.05463   CGCGGGCGCGGCGTT             GGCGGT ACACTG ACAGCC              TTCCATCCAGCCGGT  41 52
        pdxH NONE
CXD91_RS17005 NONE
CXD91_RS17010 NONE
        purU 3520749 .. 3520763 +  -5.6  -3.05384   CGAAATGGCGCAAGG               CCGCCT GCA AGGCCG               TTGCCTGCAGGGACG  46 65
CXD91_RS17040 3526597 .. 3526621 + -12.8  -3.65902   GCAAGTGCAGTTTCG          CGCCACGCGC ATCCG GCGCGTCGCG          TTTCACTGGCATCGC  77 90
        apaG 3532869 .. 3532899 + -10.3  -4.13945   CATGCCGCGTACACT       GCACTGAGCCGGG CTCCT CCCGGCACGGTGA       TTTTCCGATCCGCAT  78 19
CXD91_RS17080 NONE
CXD91_RS17085 3535357 .. 3535381 +  -3.4  -3.08032   GGCAACTCATCGAAG         GGGCCTCGCGC AATT GAGCG-GGCCG          TCGTTTTCAGGAGCA  44 9
CXD91_RS17090 NONE
CXD91_RS17095 3537386 .. 3537420 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 207
CXD91_RS17115 3540888 .. 3540902 + -11.4  -3.57144   CACGGTGGCCAGCGC               CAGGGC CTC GCCCTG               TTTGCGCGTGCGCAC  71 267
CXD91_RS17125 3543287 .. 3543306 + -16.4  -3.75153   CCGCCCGATTGCCGA            CGCCGCGC GCAT GCGCGGCG             TTTCCATTGGCGCGC  88 81
CXD91_RS17145 3546668 .. 3546680 +  -3.3  -3.04792   ATTGATGCTGCGCAA                GCGCT CGT AGCGA                TATTAACCATCGTGA  42 16
CXD91_RS17150 3547646 .. 3547666 + -14.7  -2.52676   ATCCCAAATTTTCGG            CGTCCGCCA TGG TGGCGGGCG            TCCGTTAGCAAGATC  71 40
CXD91_RS17155 NONE
CXD91_RS17160 NONE
CXD91_RS17165 NONE
CXD91_RS17170 3550768 .. 3550806 + -12.2  -3.53012   GTGCCGCCCATCCTA   CGGTAGGGCGGGGACAGC CCG GCTGAACCCGCCAAGCCG   TTTCAACAGGAAAGC  74 67
CXD91_RS17175 NONE
        atpD NONE
CXD91_RS17185 3553638 .. 3553665 + -18.6  -2.91924   CCGCCGCGTCAGGCA        GACAAAGGCGAC TTCG GTCGCCTTTGTC         GTTTCTGGCGCATCC  89 58
CXD91_RS17190 3554721 .. 3554750 +  -2.2  -3.09581   CCAGGGCAGTAAAAT       CACGGCT-TCC GATCACCAA GGATAGTCGTG       TCTGTTGCCCCTTTG  42 74
CXD91_RS17195 3556016 .. 3556033 +  -4.1  -3.60048   GGCACGACCCTGAAA             GCTCACA CCCT TGTTAGC              GTTTTTTCCCCAAAG  51 217
CXD91_RS17200 3558235 .. 3558261 +  -5.7  -2.62184   CGCTGGAGATCTGAG        CGGGGCCG-GCG CCGG CGCTCGAACCCG         TACTCTGACCGAACA  44 27
CXD91_RS17205 3560380 .. 3560390 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS17210 3561458 .. 3561499 +  -8.5  -3.14132   GGCGTTGCGGAGGGG GGAACAAGGTGCCTGTCCC CACG GGGACAGGCACCCACGCCC  TTGGTGCAGGGACAG  56 89
CXD91_RS17260 3572608 .. 3572620 +  -9.1  -3.33696   GGCGCGGTCGGCCTG                GCGCA GCA TGCGC                TTGCTTACGCGCAGC  59 219
CXD91_RS17275 3575003 .. 3575017 +  -2.7  -4.21607   CGCATCTGACGCCGC               GCGGG CCCAT CCCAC               TTTATATTCCCTCGA  63 32
CXD91_RS17280 3576185 .. 3576199 +  -3.4  -3.78934   CCCTCAAGGCGTACG               CGTAGC GCA GCCGCG               TTGTTGTGCGCGCCG  56 21
CXD91_RS17295 3579622 .. 3579635 +  -2.3  -3.07935   GGTACAATGTCGCCT               CTTCG CGCC CGTAG                TTCAATGGATAGAAT  41 184
CXD91_RS17300 3579686 .. 3579701 +  -4.6  -3.53224   ATACAGGTTCGATTC              CTGTCG GGCG CGCCAG               TTTCCCAAGGCCCTA  52 11
CXD91_RS17305 3580789 .. 3580799 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS17310 3581946 .. 3581968 +  -5.5  -3.15579   CTGCCCATGCGCCGT          GGCG-GCGTC GGCC GGCGTGCGCC           TTGCTCCCCGGTTGC  49 168
CXD91_RS17315 NONE
CXD91_RS17320 NONE
CXD91_RS17325 3585481 .. 3585517 + -10.9  -3.15544   CGGGCCACTGCGCCT   GGGCGGCGCAGTCGCGC ACGAA GC-CGA-TGCGCCGCGC   TTCGTCGGCGTCGAA  64 217
CXD91_RS17345 3588865 .. 3588917 + -27.1  -3.02144   CTGGGCCGCGCCCAA CGCCGGCTGAAGCACGGCGG-CGC GGGCTG GCGGCCGCCGCGCTTCAGGCGGCG TCTTCGAGCGCCTGG 100 16
CXD91_RS17360 NONE
CXD91_RS17365 3593447 .. 3593476 + -11.3  -2.62263   CGGACCTGTTTCCCG       ACGCCGGCCAGCG GGTG CGCTGGATGGCGC        TGGTGTCGGCGACGT  59 509
CXD91_RS17375 3595742 .. 3595794 +  -9.2  -3.04501   GCGGTATTCGGGCTT GCC-C-TGCAGTAGCAGCCGCACGCG CACGC CGCGCGCGGCGGC--CTGCATGAGGC TCTTGCGGAATTGAT  55 403
CXD91_RS17430 NONE
CXD91_RS17435 NONE
        lptC NONE
        lptA NONE
        lptB 3611208 .. 3611223 +  -3.2  -3.66288   TCAAACGTACACAAT              CTTGCG CTAG CGCAAC               TTGTATTGGCCAATA  53 108
CXD91_RS17460 NONE
CXD91_RS17465 3613479 .. 3613491 +  -4.7  -2.71144   CACGTCCAGCGGCGT                GACCG CGC CGGCC                TGGTTGCCCCAGCTG  43 127
        rapZ NONE
CXD91_RS17485 3617502 .. 3617512 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS17490 3618932 .. 3618966 +   -10  -3.41229   CCGGTTGCGCCGGGT    CCTGCTGCGCCTCGC CGCTGA GCGA-GCGCGCCAGG     TTCTGCTCGAACTAT  65 441
CXD91_RS17550 3629931 .. 3629952 +  -7.3  -4.61873   CCACCAAGAATTCGA           TGCCCAG CCCTTGCA CTGGGCA            TTTTCATTTGTGCGC  79 35
CXD91_RS17600 NONE
CXD91_RS17605 3645413 .. 3645468 +  -7.4  -4.18197   CGTCCAGCGTGATTT CCACGATGGCCGTCAGCGTGCTGCCCA CCT TGGCCGGCGCGACGATGGCCACC-TGC TTTTCGATCACGCCT  73 304
        glmS 3647931 .. 3647969 +  -8.1  -2.56715   GCAGGCGGGCGATAT  CCATCGG-CGCG-CGCTGC ACG GCCTTGTCGCGCCCGATGG  TGCATTCGTCCAGGT  48 330
CXD91_RS17635 NONE
CXD91_RS17640 3654169 .. 3654223 + -20.2  -2.50779   TGACAGTAGGCGGCC CAGGCTGGCGCGCATGCGTCGCGGCAA GGCC TTGCCGCGACGC--GC-CGCCGGCATG CTGTTGGCTTGTCAT  95 38
CXD91_RS17645 3655672 .. 3655683 +  -7.2  -3.51934   ACCACATCGACCGCC                GCGC TCCA GCGC                 TCTTTCTGCAGGGGC  58 449
CXD91_RS17655 NONE
CXD91_RS17660 NONE
CXD91_RS17665 NONE
        argE 3660312 .. 3660361 +    -2  -3.50133   GGTAGTGGTGATGTA CCCCCCCGTCACGAACGCCGGGCT TTCG GGTCCGG--TCCATGACGGTGGCG CTTTTTCTACAACTA  48 74
CXD91_RS17675 3661422 .. 3661446 +   -20   -3.3514   ATCGACTGATCGCGG          CGGGCGCCCG CGGCC CGGGCGCCCG          TTGTGCCGTGTCGGT 100 32
CXD91_RS17680 3662763 .. 3662780 +  -5.5  -2.71712   CAGAAGAACATCATT             TCCAAGG CCAT CCTGGGA              CTTTGAGCGAGAGGC  45 2
CXD91_RS17685 3664072 .. 3664091 +  -3.4  -3.65812   TCAGTTCGGGCTTGG            CGTCGTAC AGGT GGCCGACG             TTGTGTTCGGCGGGG  51 167
CXD91_RS17700 3668005 .. 3668015 +  -8.2  -3.35813   TCGGCAACTTCTTCG                 GCGC CGA GCGC                 TTCGTTCCCATCACC  60 176
CXD91_RS17710 NONE
CXD91_RS17715 3669711 .. 3669745 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS17730 3673719 .. 3673736 +  -3.3  -3.08464   TTTCGTGCTAGAATT             TCGCCTC TTTC GGGGTGG              TTAGCTCAGTGGTAG  44 73
CXD91_RS17735 3673814 .. 3673848 + -19.5  -3.54489   CCCACCAGCATCCCA    GAAGGGCCGGTCGCTT GCAA AAGC-ACCGGCCCTTC     TTCATTTCCGCTTCC 100 34
CXD91_RS17740 3674336 .. 3674362 + -11.5  -2.78384   GCTGTCTGTGCGCAT         CCCCGGGCCTG TGCGC CAGGCCTGGGC         TATCGTCGAACAACG  62 101
CXD91_RS17745 3675767 .. 3675812 +  -7.4  -3.86822   GAGCTTCTTCTAGCC CGGCGCCAGCCGCCTACCTGCC CTCG GGCAGG--GGCGGCGCGCCCAG TTTCTCGAAGGCTTC  66 28
CXD91_RS17770 NONE
CXD91_RS17775 NONE
CXD91_RS17785 NONE
CXD91_RS17790 3684862 .. 3684899 + -14.7  -3.15699   CCTGGCGGCCGGCAT   AGCCGCGGCCGGCGTCG CGTA CGAAGTCGGCCACGGCA    TCTTCATAGATGCGT  77 87
CXD91_RS17815 3688444 .. 3688471 +  -3.9  -2.78996   GCAGCGGCGGTTCGC        GGGACGGCGCG CGCAGA CGGGCCTGCCC         ATTTCGATCAGGATG  41 41
CXD91_RS17820 3689512 .. 3689550 +   -13  -3.52093   ATGGCCCGCCCGCAA   TCCGCGGCGCCGGATGCA ATA TGGGCCGGGTGCCGCGGA   TTATGGTTCCAATAT  77 53
CXD91_RS17825 NONE
CXD91_RS17830 NONE
CXD91_RS17835 3693247 .. 3693257 +  -5.4  -2.94924   GTACAAGGAATGAGC                 CTCT GGT AGAG                 CTTTCTCCATCCAGG  47 28
CXD91_RS17840 NONE
CXD91_RS17845 3695918 .. 3695946 + -11.7  -3.81755   AAGCCGGCGCCCGTC        CCTGGGTGTTCAC ATC GTGAACACCCTGC        TTCTGTTTCACGCGT  79 59
CXD91_RS17850 NONE
CXD91_RS17855 NONE
CXD91_RS17860 3699216 .. 3699232 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  60 494
CXD91_RS17875 3702145 .. 3702169 +  -9.2  -3.64822   CGACCCGCGCGCGCG         GCTGGCC-GCG CAGA CGCTGGCCCGC          TTTGGCTACACCGGT  68 347
CXD91_RS17885 NONE
CXD91_RS17890 NONE
CXD91_RS17895 3706645 .. 3706701 +  -6.6  -3.14051   TACCCGCCGGGCGTG CCCGACCATTCGACCGGCGGCGCGGT CGTGCGT ATCGTGCCTTCGGTGGGATG--CGGG TGTTCCTGGAAATAA  50 237
CXD91_RS17915 3710083 .. 3710093 +  -3.2  -2.78816   CCCGCCGCCAAACCC                 CGTC AGC GATG                 TGTCATGGCCGATGA  40 151
CXD91_RS17930 NONE
CXD91_RS17935 NONE
CXD91_RS17940 NONE
CXD91_RS17945 3714303 .. 3714315 +  -3.3   -3.6968   GGCGGCTTCCAGTTC                GCGGA ACT TCAGC                TTCTTGGGGTTCTCG  55 436
        argB NONE
CXD91_RS17960 NONE
        slmA NONE
CXD91_RS17970 NONE
CXD91_RS17975 NONE
        gatC NONE
        gatA NONE
        gatB 3729690 .. 3729708 + -10.2  -2.62515   AGCACCGCGGCGGGC             TCGGCGCC GGC GGCGCGGA             TGATCTCGACCGATT  55 359
         xth 3731358 .. 3731369 +  -7.2  -4.25104   AGCACTGGTTTTGCG                GCCG ATTC CGGC                 TTTTCGTCCGACGAA  72 313
CXD91_RS18030 3733124 .. 3733153 +   -18  -3.93262   CGCACCCGGTGATCA       TGCCGCTGACCA GCACGA TGGTCAGCGGCA        TTTCCATTTGTTGGG 100 313
CXD91_RS18045 3735769 .. 3735812 + -11.6  -3.15544   TGACGAACAGATGGC GGCCGTCGCCCTGCGCGCG GAACGCA TGCGCGCCGG-CGCCGGTC TTGATGCGCCTGACC  64 284
CXD91_RS18085 NONE
CXD91_RS18090 3744882 .. 3744892 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 73
CXD91_RS18095 3746069 .. 3746113 +    -4  -2.78463   CTTTGGCGTCCAGGC CGGTATCCGGCGCGGCCAGC ACCAG GTCGCCCGCTTCGGACAGCG TCTGCTCGCGCCACT  40 198
CXD91_RS18120 3748373 .. 3748407 +    -4   -4.9792   GCGGGCCGTCGGCGC     TGGCGCGCCGGCAGGC ACC GGTTGCATGCGCGCGG     TTTTTATCTAAAATG  79 115
CXD91_RS18125 NONE
CXD91_RS18130 3750014 .. 3750027 +  -2.3  -2.64616   GTCATCGACAGCACA               AGCAC GCTC GTGCC                TGCTCTCGATGGGAA  38 120
CXD91_RS18135 NONE
CXD91_RS18140 NONE
CXD91_RS18145 3754647 .. 3754699 + -16.2  -3.05844   CTGCTGCTGGCGCTG GGCGCTGCCCTGCTGGCGGTGG GCATTCTCG CCGCCGCCAGCGGCGCGGTGCA TATTCCGCTGGCCGA  79 60
CXD91_RS18150 NONE
CXD91_RS18155 3756392 .. 3756417 + -11.9  -3.57144   GGCCGCCTGCTGGTG         CTGGCGCGCTGA ACC TCAG-GCGCCGG         TTTCGAGGTGGCGCA  72 14
CXD91_RS18165 NONE
        alkB 3758417 .. 3758433 +  -9.3  -2.52464   GCATCAACTTCACGC              TGCGCCG CGC CGGCGCC              TGAATTCGGCCGCAA  54 6
CXD91_RS18175 3759038 .. 3759048 +  -8.2  -3.53012   GCTGTTGCGCGAGGC                 CGGC TGA GCCG                 TTTGCAACGCCGGCA  62 19
CXD91_RS18180 3760602 .. 3760619 + -12.7  -3.06915   CGTCGCGATGCTCGG             GCCGGCT GACC AGCCGGC              TTGCGTAGCGTCCCT  66 346
CXD91_RS18205 NONE
CXD91_RS18210 3764740 .. 3764754 +  -8.5  -2.56596   AGTAAACAGACAGCG               CGCGG CCGAC CCGCG               TAGATTGCTCCCGAC  52 64
CXD91_RS18215 NONE
CXD91_RS18220 NONE
CXD91_RS18225 NONE
CXD91_RS18230 NONE
CXD91_RS18235 3769649 .. 3769683 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS18245 NONE
        lptG NONE
CXD91_RS18255 3773871 .. 3773883 +  -4.7  -3.01712   CCGATGACCGGCCAG                GCGCG GAT CTCGC                TCTTGGCCACGAACG  46 510
CXD91_RS18290 NONE
CXD91_RS18295 NONE
CXD91_RS18300 3780608 .. 3780646 + -10.2  -5.80951   GCCGCGACGGGCAGG   GCCCGGCCCATCGGATTG TTA CGATCCGATGGGCTTCAC   TTTTTTGTTTTGGAT 100 45
CXD91_RS18305 3782944 .. 3782956 +  -2.7  -2.80074   GGCGGTTGCAGAATT                TTCAT GTC ATGGA                TCCTCTTGTAAAAAC  39 516
CXD91_RS18370 NONE
CXD91_RS18375 3796772 .. 3796788 +  -9.3   -2.7185   CAGGCCGGCCACGCC              GGCGCCG GCC CGGCGCA              TAATTCCACCATGAT  55 41
CXD91_RS18380 3797963 .. 3797997 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS18390 3799137 .. 3799152 + -11.8   -5.4505   GAAGCCGACCTTCCA              GCCGCC TCCG GGCGGC               TTTTTTGTTGGCCAA 100 42
CXD91_RS18395 NONE
CXD91_RS18400 3801076 .. 3801099 +  -3.1  -3.51934   TGCGGGTGGCGTTGA          TCGGGGCCGG CAAGT TCGGCT-CGA          TGTTTCTCAGCCAGG  49 219
CXD91_RS18415 NONE
CXD91_RS18430 3808655 .. 3808685 +  -8.8  -2.66316   GTGAAGGCGCCCGGG       CTGCCGTAGCCCAG GTC CAGCGCCACGGCGG       TGATCTGCTCGCCGC  51 151
CXD91_RS18440 NONE
CXD91_RS18445 NONE
CXD91_RS18450 NONE
CXD91_RS18455 3813827 .. 3813837 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS18460 3815164 .. 3815192 +    -6  -3.08679   CGATGCCGAACCAGC       CA-CG-CCGCACGG CGC CCGTGCGCACGATG       TCTTCCATCACGCGG  48 348
CXD91_RS18470 3816893 .. 3816919 +  -7.9  -3.23853   GTGACATCTTCCGGC        GGC-GCGGCGGG CGCT TCCGGCGCGGCC         TCTTCCTTGCGGCGG  53 114
        petA NONE
CXD91_RS18485 NONE
CXD91_RS18490 3820487 .. 3820518 + -18.8  -3.94846   CCGCCTGGCAATCGG      GGCCAGCGCCTGCTA ATT TGGC-GGCGCTGGCC      TTTCGCTTTTCATAC 100 123
CXD91_RS18495 NONE
CXD91_RS18500 3821666 .. 3821690 + -17.2  -3.16191   TACAATGCAGTCCCT          CGCAAGCGGC CATGC GCCGCTTGCG          TTCATGCCGGTGTAG  84 73
CXD91_RS18505 3821790 .. 3821810 + -13.3  -5.07011   AAATCAACGATCTAG            GCCGTTTCC TCT GGAGACGGC            TTTTTCGTTTATGTA 100 44
CXD91_RS18520 NONE
CXD91_RS18525 3823711 .. 3823759 +  -9.7  -3.03159   CGGCGCACGTCCTCT TCGGCG-CGGCC-GCTGCGCGCCAC GTA GTCG-GC-CAGCTGGTCGGCGCCGA TGTTGCCCACGTTGA  59 62
CXD91_RS18535 NONE
CXD91_RS18540 3830582 .. 3830604 +  -8.4  -4.05714   CGCGGCTGAGCCCGC          GC-CGCCGG CCAGCC CCGGCGTGC           TTTATCATTGGCCCT  72 32
CXD91_RS18545 NONE
        thiD 3832366 .. 3832376 +  -3.2  -4.21462   GTTGACTCCCCTATA                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  63 67
CXD91_RS18555 NONE
CXD91_RS18560 NONE
CXD91_RS18565 3834610 .. 3834650 +  -6.8  -3.05268   CGTGAAAAGAAGTCA CCGCGTCGACGCAGC CCAGGGCCGCCA GCAGCG-CGGCGCGG  TCTTGCACCTGATTG  48 246
CXD91_RS18575 3836268 .. 3836281 +  -3.7  -2.87132   GCGCCCTGCGACCCG               GGCGC GCCC GCGCA                TCTGTAACAGGGACG  43 97
CXD91_RS18580 NONE
CXD91_RS18585 3838409 .. 3838440 +  -4.4  -3.72576   CAGGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  55 92
CXD91_RS18590 3839820 .. 3839854 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD91_RS18605 NONE
CXD91_RS18610 NONE
        fusA NONE
         tuf 3845773 .. 3845798 + -11.1  -4.62203   AGCAGTACCCAACCA         GTGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CXD91_RS18625 3846170 .. 3846209 + -20.2  -3.53091   TGTGGCGCAGCTCGT  GAAAAATGGCCGCATTCC CCCG GGAGTGCGGCCATTTTGC   TTTGGCGCGACAGCT 100 63
CXD91_RS18630 NONE
CXD91_RS18635 NONE
CXD91_RS18640 NONE
CXD91_RS18645 NONE
CXD91_RS18650 NONE
CXD91_RS18655 NONE
CXD91_RS18660 NONE
CXD91_RS18665 NONE
CXD91_RS18670 NONE
CXD91_RS18675 3851293 .. 3851315 + -17.8  -5.84381   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG 100 70
CXD91_RS18695 NONE
CXD91_RS18700 3855390 .. 3855401 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAGTT  44 31
CXD91_RS18705 NONE
CXD91_RS18710 NONE
CXD91_RS18715 NONE
CXD91_RS18720 NONE
CXD91_RS18725 NONE
CXD91_RS18730 NONE
CXD91_RS18735 NONE
CXD91_RS18740 NONE
        secY NONE
CXD91_RS18750 NONE
CXD91_RS18755 3860486 .. 3860505 +  -2.8  -3.08812   GCGTCAAGGCTAACC            CAGTTAGCG GTA CGC-AACGG            ATTTATTCAAGGAAC  44 28
CXD91_RS18760 NONE
CXD91_RS18765 3861285 .. 3861300 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  44 3
CXD91_RS18770 3862015 .. 3862044 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  78 98
CXD91_RS18775 3863153 .. 3863181 + -21.7  -2.84218   CCGTAAGCAGTCAAG        CGCGGTGGGCGCG CCA TGCGCCCGCCGCG        ATGTTTTCATGCATC 100 35
CXD91_RS18780 3863718 .. 3863747 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCGCGCG 100 46
CXD91_RS18790 NONE
        dsbD 3866580 .. 3866633 +  -3.1  -3.04144   GCTCCTGACGTTGCT TCGTATC-GCCTCGGGCGCGC-CCG AGGCGA TGGCGTGGGCGAGAGGCTGGTACGA TGTTGCCCATACCAG  42 33
CXD91_RS18800 3867832 .. 3867842 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGGCGC  52 207
CXD91_RS18815 3870295 .. 3870321 +  -6.4  -5.14563   CCGTTGTCTATGAGG         GGGGGGAAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAACGC  90 112
CXD91_RS18820 NONE
        ccsB 3873785 .. 3873814 + -22.3  -3.54459   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 44
        cyaY 3876157 .. 3876210 + -17.3  -2.80816   CGACGTCGCTGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCACGCAGCA TATCGTCCATGACGA  78 513
CXD91_RS18850 NONE
CXD91_RS18855 NONE
CXD91_RS18860 3881241 .. 3881296 + -14.6  -5.14965   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCCGGCGGA TTTTTTCGTCCGCGT 100 120
CXD91_RS18875 3886350 .. 3886368 +   -16  -3.44848   GCTTCACCCAGTATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  82 142
         ssb 3886998 .. 3887013 + -10.4  -5.78622   CGCTGGATGCGAAAG              CCCTGC CCAG GCAGGG               TTTTTTTTCGCCTGG 100 57
CXD91_RS18885 NONE
CXD91_RS18890 3889839 .. 3889851 +  -4.8  -3.32844   GGGCTGGGCCGGGCC                GCGA TCGAT TCGC                TTATCCGCTGACCGC  49 2
CXD91_RS18895 NONE
CXD91_RS18900 NONE
CXD91_RS18905 NONE
CXD91_RS18910 3892721 .. 3892763 +  -7.4  -2.79796   GCCAGCATATGGGGC ACCTGCACCGCCACGTCGCG CGT CACGCCCAGGCGTTGCAGGG TGTCCTGCAATACGC  49 284
CXD91_RS18920 NONE
CXD91_RS18925 3896307 .. 3896337 +  -3.2  -2.63301   GGATCTTTCCTGCCA       GCAGTGTGTCTATG TAC TACATTCACACTGC       TACTCTCAGAATGTC  39 137
CXD91_RS18930 NONE
CXD91_RS18935 3898352 .. 3898375 + -17.4  -3.28712   GCCCCGCAGCGGGGC          GCGGCTGGCC GCAA GGCCGGCCGC           TTGTCGCCCGCACGC  86 59
CXD91_RS18940 NONE
CXD91_RS18945 3900494 .. 3900517 + -17.4  -3.97331   GACACGATTGTCCTG          CCGGCGGGCG AGGC TGCCCGCCGG           TTCTTTGCCTGGATT  95 44
CXD91_RS18950 NONE
CXD91_RS18955 NONE
CXD91_RS18960 3903691 .. 3903708 +  -9.9  -3.72576   TCATGATTTCCTCTT             TTCGCAC GGAC GTGCGAA              TTTAATCGAAAAAAA  71 284
CXD91_RS19005 3912259 .. 3912274 +  -4.6  -2.53382   CCGCCGATTGACAAG              CCTGGC CGGC GCTGGG               TAGATTGCGCCTACT  42 30
CXD91_RS19010 3913383 .. 3913421 + -10.9  -3.73224   AGCGGGCGCATACCT  CGCTTGAAGGCGGCGGCC GCAT GGCCGCCGTCG-CAGGGG   TTTCGTACCCCATCG  73 39
CXD91_RS19045 3918325 .. 3918344 +  -4.8  -3.35679   CCTGGCCGAAGGAGC            GGCCTGAG GCGC CGCCGGCC             TTCTCCATCCACGAA  51 19
CXD91_RS19055 NONE
CXD91_RS19060 3921484 .. 3921523 + -13.5  -2.78715   ACTGAGGCTGCGCGA TCGCCC-GC-CCGCCGCGC GTGC GCGCGGCGCCGCTGGGCGC  TATAATGCGCAACTT  67 36
CXD91_RS19065 3922097 .. 3922124 +  -8.4  -3.06831   AGACCTCCTCGAGTG        GCGCCG-TGGTGT CGA ACGCCATCCGCGC        TTGCGTGAACGTTGA  55 477
CXD91_RS19080 3924097 .. 3924128 +   -13  -2.89668   CATCCCCGACCAGCT      GACCGACTGAGCGC CGGC GCGCTCAGTCCATC       TGTATCCCGCTCTTG  69 16
CXD91_RS19135 3935792 .. 3935804 +  -5.5  -3.55622   ACCTCGCGGTGCACC                GCGTC CTC GATGC                TTTCGCCGACTTCGA  54 315
CXD91_RS19160 3940692 .. 3940704 +  -6.9   -3.7456   GCCCGAGAACGTGGC                CGGCG GCT TGCCG                TATTTCTTGGTGTAG  61 272
CXD91_RS19205 3950067 .. 3950082 + -10.4  -2.57132   TCGCCGGCAGCAAAC              TGCCGC TGGC GCGGCA               ATTCTAGGCGGCGGG  57 3
CXD91_RS19210 3951131 .. 3951141 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS19215 3952325 .. 3952344 +  -5.6  -3.90112   CACGGCGCACAGGAC            GCCGCGGCC GTC GGCCA-GGC            TTTCCTTCAGGCCGC  60 205
CXD91_RS19250 3959581 .. 3959604 +  -9.4   -3.1372   AGGCCTTGATGTCGT          GCGCCAGCGC TTCG GCGCCGGCGG           TATTGGTGGCCAGTA  59 220
CXD91_RS19280 3963832 .. 3963849 + -12.7  -3.21218   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  69 86
CXD91_RS19310 3969287 .. 3969329 +   -14  -3.23853   CGCCGGCGCCGAATC CTCCGAGGCCGTGCTGGCGG CGG CCGCCGCCGCGGCTTGCGAG TATTGCTTCCACACC  75 147
CXD91_RS19320 3973174 .. 3973221 +  -6.1  -4.63218   GCGGTCTGTCTTGCA TGCGCGG-GCGCCG-CGTACGGC GTCA GGCGGGGGTCAGCGCACCGCGCA TTTTCTTCAGCGCCG  78 397
CXD91_RS19345 3977910 .. 3977939 +   -15  -4.25104   CGGGGCGTTGCATGC       TGCCCACCCGGC CCCTGT GCCGCGTGGGCA        TTTTGCTGCGCCCGC  95 55
CXD91_RS19350 NONE
CXD91_RS19355 3984515 .. 3984527 +  -9.1  -3.18264   GCCTGTCCCCGCGGG                GACGG ATA CCGTC                TTAGTACGTACGGCA  59 101
CXD91_RS19360 3985349 .. 3985363 +  -7.8  -3.28712   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTGAGGCGCCCGC  56 5
CXD91_RS19365 NONE
CXD91_RS19370 NONE
        mlaE NONE
        mlaD NONE
CXD91_RS19385 3989637 .. 3989655 +  -5.2  -4.72386   GGCCACCGCCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  81 45
CXD91_RS19390 3990434 .. 3990445 +  -5.8  -4.07568   AGCCGCGCCGGCGCG                GCTG GAAG CAGC                 TTTTCGGCCAGCCGG  64 185
CXD91_RS19400 NONE
CXD91_RS19405 NONE
        murA NONE
CXD91_RS19415 3994197 .. 3994218 + -18.7  -2.61274   CATCGCCTGAACCCC           GCCGCCCGC GCCG GCGGGCGGC            CTTCCTTGCAGTACC  87 31
        hisD NONE
CXD91_RS19425 NONE
        hisB 3997207 .. 3997221 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCG  42 3
        hisH 3997952 .. 3997964 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  57 39
CXD91_RS19440 NONE
        hisF NONE
        hisI NONE
CXD91_RS19455 NONE
CXD91_RS19460 4000658 .. 4000673 +  -2.4  -2.90496   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAATTTCGGAGAACC  40 7
        tatA 4000930 .. 4000955 + -12.6    -3.889   CCTAGTCCCGGCCCG         GGACCGGC-CC ATGAC GGCGCCGGTCC         TTTCCTATCGTTCCA  81 36
        tatB NONE
        tatC 4002272 .. 4002297 +  -5.3  -2.52676   AAGTAGACGGTTTCA         CGCTTGCCGCGG CCG CC-CGGCATGCC         TACATTGCCGGCATG  44 65
CXD91_RS19480 4002813 .. 4002827 +  -4.2  -2.82327   TTCGCATACCAAATC               CTTGCC GGC GCCAAG               ATTTCAGTATGAGAA  43 43
CXD91_RS19485 4004036 .. 4004079 + -11.6  -2.52516   CCGTCCGGCCGGCAC CATCCCGCATACGTGTTGGC AACC GCCAACGCGCATGCGTGCAG ATTCGTCGTACAAAA  61 67
CXD91_RS19490 NONE
CXD91_RS19495 NONE
CXD91_RS19500 NONE
CXD91_RS19505 4006619 .. 4006629 +  -3.2  -3.63968   ATATTGCGAATGAAC                 CCTT CCG GAGG                 TTTCGACGTTTCCGC  53 28
CXD91_RS19510 4007378 .. 4007396 +    -3  -3.09785   CGGCAGCGTCGATAT             GTTGAGCC GCC GGCTCGGA             TCTGTTCGCCTGTCC  44 21
CXD91_RS19515 NONE
CXD91_RS19520 NONE
CXD91_RS19525 NONE
CXD91_RS19530 NONE
CXD91_RS19535 NONE
CXD91_RS19540 NONE
       virB9 NONE
CXD91_RS19550 NONE
      virB11 4015761 .. 4015771 +  -2.4  -4.29396   ACGCCTGCCGCCTGC                 ACGC ATT GCGA                 TTTTCGTGCATAATT  62 40
CXD91_RS19560 4015890 .. 4015911 + -15.9   -4.7497   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC 100 37
CXD91_RS19570 NONE
CXD91_RS19575 NONE
CXD91_RS19580 NONE
CXD91_RS19585 4021281 .. 4021313 +  -5.4  -3.02043   ATGTGCCTGCTTGCT      TTGCGCACCGGCGT CCATC GCGCCGCGCCGCAA      TCTTCCCACCGCCTT  47 209
CXD91_RS19590 NONE
CXD91_RS19595 NONE
CXD91_RS19600 4025072 .. 4025105 +  -5.2  -3.71873   CGCATCGAATTCCCG    AGCCGGCG-CGG-CAC GCTG GTGGCCGTCGACGGCG     TTTCGCTGTCGCTGG  57 75
        argJ NONE
CXD91_RS19620 NONE
CXD91_RS19625 4029776 .. 4029795 +    -2  -2.89475   GGATCCGCGGGCTGC            TCTGACGC AACG GCGCTAGG             TGTGATGTCTCAATA  40 21
CXD91_RS19630 4030866 .. 4030876 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS19635 4031915 .. 4031925 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD91_RS19645 4033103 .. 4033124 +  -3.7  -2.70932   CGCCACGCTCAGGTA           GT-CGATCAG CCC CTGCTCGTAC           TGGTTGCGCGCCAGG  40 199
CXD91_RS19685 NONE
CXD91_RS19710 NONE
        glpK 4050984 .. 4051020 +  -2.2  -3.53811   CACGCCGGCGCGCCG   GCCGCGGGGCTG-GCC AGCTGGC GGCGCAGCACCA-GGC   TTTGCGCGCCATGCA  50 138
CXD91_RS19750 4057702 .. 4057718 +  -2.2  -2.70932   CACGACACGCACGGA              GGCC AAGCATGAA GGCC              TGGTTGCGACAACAC  38 14
CXD91_RS19755 4058609 .. 4058622 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4059732 .. 4059777 +  -6.2  -3.18264   CGGCGTGCTCCAGGT TGCCGCGGTTCAGCTTGGGC AGGATCGC GCCCA-GCTGC-TCGCGGTA TTGCTCGATCAGCGC  51 280
        mutY 4064475 .. 4064485 +  -3.2  -3.28924   CCAGCCTGAAGGTGA                 TCTG CTG CAGG                 TTCTGCCGCCCGCTG  47 95
CXD91_RS19780 4066207 .. 4066217 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 144
CXD91_RS19785 NONE
CXD91_RS19790 NONE
CXD91_RS19795 NONE
CXD91_RS19800 NONE
CXD91_RS19805 NONE
CXD91_RS19810 NONE
CXD91_RS19815 4073335 .. 4073354 + -16.4  -6.06723   GGCCGAGCGTGCACG            CCGCCCCG CAAC CGGGGCGG             TTTTTTTTTCGCGCG 100 57
CXD91_RS19825 NONE
CXD91_RS19830 4076055 .. 4076080 +  -5.9  -3.61652   GACGGAAAGGCGATG         CCGGCGTCCGG CTGG CCCGCCGCCGA          TTGATTGTTTACGCA  56 53
CXD91_RS19835 4077531 .. 4077551 +  -2.4  -2.78712   AGACCAAGCCCTATC            CCAGCGAG CCATT CACGCTGA            TCGTTCCGTTCGGCG  38 209
CXD91_RS19850 4080514 .. 4080533 +  -2.8  -4.07568   GCACCGTCACGCGCT            CCAGCGTGT CGA ACAC-CAGG            TTTTCCACAGCCAGG  58 124
        mnmE 4092948 .. 4092966 +  -6.7  -2.62184   CCGCGCCGGCGATGC            GGCC-CAC GATC GTGCGGCC             TGCTATCGCGCAGCC  47 398
CXD91_RS19915 4095056 .. 4095069 +  -2.3  -3.29947   AAACCCGCCATCGCA               CGCTG AAGA CGGTG                TTGCTGTGGTGGCTG  44 49
CXD91_RS19920 4096531 .. 4096545 +  -5.7  -3.06183   TCATCCGTTGGCCTG               CGATC TGCGC GATCG               TTCCATGGCCATCCA  47 74
CXD91_RS19925 4097614 .. 4097646 + -18.4  -3.02144   AAGAAGTAAACCGAT     CGCGCGGCCGGCGGC ATGC GCCGCCG-CCGCGCA      TCTTCCCAACGGTGC  90 32
CXD91_RS19930 NONE
CXD91_RS19935 4099690 .. 4099711 + -15.9  -5.06414   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 46
CXD91_RS19945 4101520 .. 4101531 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CXD91_RS19940 4099690 .. 4099711 - -15.9  -4.65895   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 59
CXD91_RS19910 4092228 .. 4092242 -  -5.7  -4.15788   AACGTCTTCAACAAA               GTCGA TCTGC TCGAC               GCGGCGTTCCAGGGC  69 303
CXD91_RS19900 NONE
CXD91_RS19895 NONE
CXD91_RS19890 NONE
CXD91_RS19885 NONE
CXD91_RS19880 4085555 .. 4085567 - -10.5  -2.78384   GTTTCTTTTAGCACA                GCGCG CGG CGCGC                TCAGGCCTGCTGCGC  57 26
CXD91_RS19875 4084186 .. 4084206 -    -9  -3.12999   GCATGGGACATGGAA            CCGCTCCT TGTTC AGGAGCGA            TCCATTATGAAAACG  59 130
CXD91_RS19870 4083265 .. 4083275 -  -8.2  -2.57344   GACGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTGCG  52 8
CXD91_RS19865 4082157 .. 4082170 -  -2.4  -2.86676   CCGAGGAATCGAAAC               GATG CGCGCC CATC                TCAGCTTCCCTGCGC  40 26
CXD91_RS19860 NONE
CXD91_RS19855 4080438 .. 4080467 - -22.9  -3.48593   GACGCCGCGACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       GGCGGCATTCAGCGC 100 34
CXD91_RS19845 4077652 .. 4077684 - -10.6  -4.17762   GATCGTGGAAAACAA     GGCTG-GCGCCAATG GCAT CATCGGCGCGCAGCA      TGCGAAGAAGGCGAC  89 235
CXD91_RS19820 4072951 .. 4072963 -  -9.1  -3.01791   ACGGCGTCCTGAACA                TCGCC CGC GGCGA                CCGGGTCCGGATGAA  55 446
CXD91_RS19775 4064032 .. 4064062 -  -5.2  -2.52896   CCATCCCCGAACGCA       GCACGGCCATGCTG GTG CTGCACGGCCCCGA       CGGCATCCTGCTGCA  42 379
CXD91_RS19745 4055603 .. 4055620 -  -2.5     -2.97   AAATCAATCTACAGA             GTCGGAC GTTC GGCCGGC              GCGGACGCGCCGGCC  41 112
CXD91_RS19740 NONE
CXD91_RS19735 NONE
CXD91_RS19730 4052458 .. 4052492 -  -2.7  -3.53811   GCGATCCGCCGGAAA    GCCCGGCGCCAGCG CCGTTTCC CGCCGCC-CCGGCC     CGCCGCCTCAGTGCA  49 33
CXD91_RS19725 NONE
CXD91_RS19720 4050544 .. 4050557 -  -8.1  -3.14132   GCTGTCGTGCATGAA               TGCCG ACAG CGGCA                TCCCGCTGTCCGAGC  53 358
CXD91_RS19705 4047571 .. 4047598 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  43 42
CXD91_RS19700 NONE
CXD91_RS19695 4045779 .. 4045794 -  -7.6  -2.57132   GCCTGCGCCGAGAAG              CTGTCA AATT TGACAG               GATCTGCCGCGGCCG  50 45
CXD91_RS19690 4045096 .. 4045146 -   -11  -2.50935   ACGCCACCCAGGAAC GCCCGCCCCGCGTGCTGCTGCT CGACGGC AGCGGCAACATGCGCGCCGAGC TGGTCATGACCGCCA  58 248
CXD91_RS19680 NONE
CXD91_RS19675 NONE
        zapD 4041890 .. 4041904 -  -5.6  -3.55071   CCAGACCGGCCCAAA               CTGGCA GTT TGCCGG               GCGCTGCTGAAATAG  54 137
        mdtA 4040571 .. 4040600 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  52 10
        mdtB 4037507 .. 4037529 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  42 16
CXD91_RS19655 NONE
CXD91_RS19650 4032726 .. 4032760 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS19610 4025269 .. 4025298 -  -9.9  -3.16191   CGACACCTTGAGCAA       CGCCGAGCAGCGCA AGG TGCGCGGC-CGCCG       CATCGGCATGATCTT  62 140
CXD91_RS19565 4015890 .. 4015911 - -15.9  -3.91144   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC  91 66
CXD91_RS19340 NONE
        fghA 3974957 .. 3974988 -  -4.3  -4.08706   CGCCCAGTATATAAA      GCGGCCCGGGC CCGGCCTGTT ACCCCAGCCGC       TCGACGTGAAACCGG  62 13
CXD91_RS19330 3974179 .. 3974198 -    -2  -3.53012   CTGCGCCGCGCCAAA            GTTCCGGA ATTT CCCAGTAC             GCAGGATATTTTTCT  48 54
        rpoH 3973147 .. 3973166 - -13.6  -5.40474   AGGCCCCCAAAAAAA            CAGACCGC CGTA GCGGTCTG             TCTTGCATGCGCGGG 100 55
CXD91_RS19315 3968852 .. 3968867 -  -8.2  -3.66666   GCGAAAACCTGGAAA              CCGCGC TGGT GCGCGA               ATGCGGCGAAGAAGC  63 427
        coxB 3966891 .. 3966923 - -13.4  -3.22858   CCAACTACAGGAACA     GCAGCGG-GGCGCGC TTCA GCGCGCCTCCACCAC      GTCCTTGGGTTGGAC  73 8
        ctaD NONE
CXD91_RS19295 NONE
CXD91_RS19290 NONE
CXD91_RS19285 3963832 .. 3963849 - -12.7  -3.33696   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  71 57
CXD91_RS19275 NONE
CXD91_RS19270 NONE
CXD91_RS19265 NONE
CXD91_RS19260 NONE
CXD91_RS19255 3959420 .. 3959446 -  -8.7  -2.87132   TTGGGCGTCCACAGA         TATCGGCCCCC CATGC GGGGACAGATA         CCGTCTTGGCAGTCA  54 137
CXD91_RS19245 3958292 .. 3958307 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CXD91_RS19240 3957435 .. 3957464 -  -2.6  -3.31322   GCGAAGGTTCGATAA       GCGCGACGATTC CAGGGC GTGCCGGCGCGC        TACGGCTTGTCCGCC  44 25
        glmU NONE
CXD91_RS19230 3954541 .. 3954572 - -10.8  -3.04322   TGCAACCTCGCAATA      CGCGGCGTCAGCGGA CCA TCCGCCG-CACTGCG      GGCATTATAGAAGTA  62 87
CXD91_RS19225 NONE
CXD91_RS19220 3951942 .. 3951976 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS19200 3948357 .. 3948367 -  -8.2  -5.15634   CACTCTAGGAAAAAA                 GCGC GGC GCGC                 GAAAATAATTAAAAC  95 203
CXD91_RS19195 3946916 .. 3946947 -  -8.6  -2.56596   TGGGTGACGAAGGGA      TGCGAGGGCCG-CCG TGG CGGCCGGCCCTCATT      CGGAGGTGGCGGTGC  52 21
CXD91_RS19190 NONE
CXD91_RS19185 NONE
CXD91_RS19180 NONE
CXD91_RS19175 NONE
CXD91_RS19170 NONE
CXD91_RS19165 3940081 .. 3940095 - -11.4  -3.90112   TGGCGGCCAAGGAAA               CGCTGG CCA CCAGCG               ACCTCAACACCGAGC  77 391
CXD91_RS19155 NONE
CXD91_RS19150 NONE
CXD91_RS19145 3936294 .. 3936305 -  -2.2  -3.18389   GGAAGATGAAAATCA                CGAA ACAC CTCG                 TTCATGCAGGCCCGG  42 95
CXD91_RS19140 3935411 .. 3935456 - -14.5  -3.70902   CGCGCGAGACCGAAA GCCCGGGTTTCCGGCAGCGCG TCGC CACGCAGCTGGCCACCCAGGC CACCCAGGCCATCCA  88 96
CXD91_RS19130 NONE
CXD91_RS19125 NONE
CXD91_RS19120 NONE
CXD91_RS19115 3930141 .. 3930154 -  -5.2  -3.10611   TTTACCCGAAGAAAC               GGGC CAGCAC GCCC                TGCCGCGGATGTCGG  49 382
CXD91_RS19110 NONE
CXD91_RS19105 NONE
CXD91_RS19100 NONE
CXD91_RS19095 3926380 .. 3926390 -  -8.2  -2.70932   CTCTGTCTGCAATGA                 GGGG GCG CCCC                 GGGTTCAGCGCCCGT  52 30
CXD91_RS19090 3925139 .. 3925154 -    -6  -2.55606   CTATATAGGATGAAT              GGGGTG CCTG CCCCCC               TGGGGACAGATACCG  46 163
CXD91_RS19085 3923973 .. 3923989 - -10.8  -3.19602   CGGGCTACACCAAGA              CGCCGC CCTAC GCGGCG              GGCATCGCCCTGCAG  64 155
CXD91_RS19075 3921702 .. 3921714 -  -3.3  -3.60475   AAGTGTGATCCGAAA                GCGGA CCG CCCAC                TTTGGTTGGGTCGGT  49 498
        trmB NONE
         pip NONE
        thiS NONE
        lysM NONE
CXD91_RS19020 3914265 .. 3914278 -  -5.9  -2.87931   GCCAGGTGCGACAGA               CCGGC GCGG GCCAG                GACGCGGCTGACGGT  48 330
CXD91_RS19000 3910382 .. 3910401 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TTGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CXD91_RS18995 3909319 .. 3909333 -  -2.8  -3.01924   GATTCGCCCGCAAGA               TCCC ACCAATG GGGA               GTTGGGAACGCGTCT  42 101
CXD91_RS18990 3908900 .. 3908932 - -18.5  -5.81412   CGGAGGCAAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTACGGCTGCG 100 63
CXD91_RS18985 3907180 .. 3907208 -  -7.4  -3.53012   GCGCGCTGCTCGAAA       GCGAATCGGC-CC GGCT GGCGGCGATCCGC        GGCACGGACGCCGAC  60 434
CXD91_RS18975 3904402 .. 3904425 -   -21  -2.71364   GCAGCCCGGCAAGCA          GGCGCCCGCC GGCA GGCGGGCGCC           TGGCGGCGTCAGCGC 100 34
CXD91_RS18970 3903724 .. 3903740 - -15.1  -5.53288   TTTAATCGAAAAAAA              CCGGCGC CCG GCGCCGG              ACCATGACTGCGTTC 100 39
CXD91_RS18965 3903441 .. 3903478 - -16.9  -2.65174   AAAATAAGTAATCTA   CCCGGGAGCCTGTCCCC GCAT GGGGACTGGCTCCCGCC    AACTTCAGCCGTCAG  80 104
CXD91_RS18915 3892053 .. 3892079 -  -9.2  -2.52516   CGCGGCACGACGAAG         CCGCCGCCACGC TAG GCCAGGCGCCGG         GGGCGCAGCTGTATC  51 513
        uvrA 3881998 .. 3882032 -  -2.8  -3.01712   GGCCTGGCGGCAAGA    TAGGGGGG--CGGGCG GTTCG CGTCCGTGCCGCCCTA    GTCTAGCGCCGTTTG  42 28
CXD91_RS18865 3881139 .. 3881162 -  -8.9  -3.53012   GGCGGCTGTTCGAAA          TGGGCTGAGG GGCTG CCTC-GCCCA          TGCGGCCTACCCCAA  62 183
CXD91_RS18845 3875395 .. 3875420 -  -2.4  -3.70149   TCGACAGTATCGAAA         GCCAGGCGGAC GATTG GGCCGCA-GGC         CTGGATGTCGATATC  53 331
CXD91_RS18835 NONE
        lysA 3873785 .. 3873814 - -22.3  -3.53012   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 48
CXD91_RS18810 NONE
        hemB NONE
CXD91_RS18785 3863152 .. 3863182 - -15.3  -3.13164   CCCGTAAGCAGTCAA       GCGCGGTGGGCGC GCCAT GCGCCCGCCGCGA       TGTTTTCATGCATCG  78 453
CXD91_RS18685 3852320 .. 3852340 - -15.4  -4.72272   GCCGGCCATGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCCTGAGCCCGG 100 50
CXD91_RS18680 3851293 .. 3851315 - -17.8  -3.72576   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG  93 125
CXD91_RS18595 3839630 .. 3839651 - -15.1  -3.14132   TCTGTTCTTCACCAA           GGCCACGCC TTCG GGCGCGGCC            TAGCTGTGAACTGTC  76 25
CXD91_RS18570 3834047 .. 3834078 -  -2.2  -4.68103   CCAACTGGAACAAAA     GGC-CCGCCACGAC TTCGAG GACGC-GCGGCGCC      AGGCCGTGCAATCGG  76 357
CXD91_RS18530 3823471 .. 3823505 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS18515 NONE
CXD91_RS18510 3821632 .. 3821644 -  -3.3  -3.34517   AGCCTGTCCGAAAGA                CTGCG GCG CGAAG                TTTCACTACAATGCA  46 518
        mscL 3816363 .. 3816375 -  -6.2  -3.63569   GCAATGGGGCAACAA                CGCC CAGCT GGCG                CGCGTGCTGGGCCTG  57 479
CXD91_RS18465 3814638 .. 3814672 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS18435 3808275 .. 3808301 - -12.3  -2.58544   GTGCACCCGCACAAT        GACCGCGG-CAC CGCC GTGGCCGCGGCC         GAGCTGGCGGTGCTG  62 285
CXD91_RS18425 3806615 .. 3806658 -  -8.1  -3.33814   AAACGCTAGATAATA CGCCGGATCCG-GGCA-CGACG CCC CGCCGGCGCCTCAGG-CCGGCG GCTCGCGCCGCGCCG  56 15
CXD91_RS18420 3804534 .. 3804560 - -11.5  -2.74488   CAACGACGCGAATCA        GCGCGCGCCGGC GCTG GCCG-CGCGGGC         CTGTGAATCAGGACA  62 176
CXD91_RS18410 3802000 .. 3802019 -  -7.8  -3.35679   TTCGGCCATGTACAA            GCCCTATC ACCT GATCGGGC             TGGAGCTGGGCATCA  59 391
CXD91_RS18385 3797444 .. 3797475 - -10.1  -3.05384   CTGCTGCGCACCGAA      GGCAGC-GACCCGC TGGAC GTGGGCCGGCTGCC      GCTGCTCAAGGTGGA  59 344
CXD91_RS18365 NONE
CXD91_RS18360 NONE
CXD91_RS18355 NONE
CXD91_RS18350 NONE
CXD91_RS18345 3790440 .. 3790467 -  -9.1  -4.07568   GTGCCGTCCCCAAAA        GCGCTGCGCCGG ACAGG CCGGCGCAG-GA        AGGAAGACTTCGGGA  75 56
CXD91_RS18330 NONE
CXD91_RS18325 NONE
CXD91_RS18320 NONE
CXD91_RS18315 NONE
CXD91_RS18310 3782218 .. 3782236 -  -3.1   -3.4247   AGAACGTCAACAACA            TGAGCGAG CGCG CCCGC-CA             GACGCACGCCAAGAT  47 336
CXD91_RS18285 NONE
CXD91_RS18280 NONE
        ruvX NONE
CXD91_RS18270 NONE
CXD91_RS18265 3774230 .. 3774244 -  -2.7  -2.82516   CCGGGCAGCATCATA               CCCGC GAACG GCGTG               TGCACGCTGCGGCTG  41 64
CXD91_RS18260 3773388 .. 3773424 - -16.4  -3.06831   CCAACGGCGACTGAA    CGCCGCCGCGGGCGGC CACGC GCCGCCCGGGCCGGCT    ACAGCTCGCCGGCGA  79 24
CXD91_RS18240 3769073 .. 3769097 -   -15  -3.16492   GGATAGCCAGCAACA         CGCCG-GCGGG ACGG CCCGCGCGGCG          GCAACCGGAGGATGA  76 408
CXD91_RS18195 NONE
CXD91_RS18190 NONE
CXD91_RS18185 3759933 .. 3759955 -    -9  -2.71681   CAAGTCGGTCAATGA           CACCCACGGC CAT GCCGCCGGCG           ACCGGCTGCTGCGCG  52 361
CXD91_RS18160 3756232 .. 3756242 -  -2.4  -2.82519   GCATGACATCAATCA                 GGCG GCG CGCT                 GGTGCGACACGCTGG  39 190
CXD91_RS18115 NONE
CXD91_RS18110 NONE
CXD91_RS18105 NONE
CXD91_RS18100 3745693 .. 3745727 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS18080 3741495 .. 3741519 -  -7.8  -4.96388   AAGCACTAAATAAAA          GCCCGGGA AAACCCGCA CCCCGGGC          GCGACGCCGCTTCAG  86 37
CXD91_RS18075 NONE
CXD91_RS18070 NONE
CXD91_RS18065 3738649 .. 3738665 -  -3.6  -2.62157   GATGAATGCGATAAG              CCATGG CCGTT CCAGGG              TGCGTCTACTTCTTG  40 31
CXD91_RS18060 3737571 .. 3737598 - -15.6  -2.56596   CCCCGCAGGAATCCA        TGTGCCTGTCCC CGCT GGGACAGGCACC         CCGGCACCCCGGGCA  74 69
CXD91_RS18055 3736590 .. 3736618 - -10.1  -4.11216   GCGGCATGCCGAAAA        GCGCGCCGCCGCG AGC CGCGCCGGCAAAC        CCCGCCGCTTGTTGC  78 94
CXD91_RS18050 3734985 .. 3735001 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD91_RS18035 3732725 .. 3732754 -  -4.1  -4.29738   CGATATCCACGAAAA       CTGCGTGCGCCAC GGCC ACGGCGCCGGCAA        CTACGTCAACTATGT  67 144
CXD91_RS18020 3729348 .. 3729377 -  -2.7   -4.8622   CTGCTGAAGGAAAAA       CTGGG-CTGATCCC TCG GGAGCCAGTCCCCG       TGGGGACGAGCTCCT  77 118
CXD91_RS18000 3724694 .. 3724722 -  -4.5  -3.35679   TCGTTGCATGGATAA       TCAGCC-CGGGC CTGCCT GCCCGCAGCTGC        TTCGCGGGCCGCGCC  51 79
        mreC NONE
        mreD 3723239 .. 3723264 -  -3.9  -3.09492   TCTTGAATTCGAACA         TGCGCCCGCCCG GAT CAGACGG-CGGA         AGATTCGACGTCGTC  45 14
        mrdA NONE
        rodA 3719636 .. 3719683 -  -4.6  -3.61715   GATCGCGGTCAACAA GGCGCGCGTGCTGGCGGCCAG GGGCGAG CCGGCCCCCGACG-GCGCGCT GATCGATGCGCAGGG  54 496
CXD91_RS17950 3713522 .. 3713560 - -11.9  -4.42788   TCGAAGGCCAGAAAA  TCACCATGCAGGACC-TGC GCG GCAAGGTCGTGC-TGGTGA  AGTTCTGGGCCACCA  88 498
        rsmI NONE
CXD91_RS17920 3709754 .. 3709788 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS17910 NONE
CXD91_RS17905 NONE
CXD91_RS17900 3706465 .. 3706496 - -15.9  -4.25104   GTCCCCGCAGGAAAA      CCGGTGCCTGTCC GCGCGG GGACAGGCACCCG       GGCCGGCGCTCAGCC  95 35
        trxB 3699711 .. 3699721 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS17865 3698409 .. 3698430 -  -8.7  -3.18582   CAGCTCAGCTACCAA           CCG-CTGCGC GAT ACGCAGGCGG           TGGGCCTGGTGGCGC  56 269
CXD91_RS17805 NONE
CXD91_RS17800 3685792 .. 3685806 -  -2.7  -2.62184   CTTCTGCTCAGACCA               TGCGG CGTGC CCGCC               AGTTCCCTGGCGTCA  39 38
CXD91_RS17795 3684383 .. 3684393 -  -5.4  -3.37533   CCCCAAAACCATCAA                 GGAA CGC TTCC                 TGCACGCGTTCTTCT  49 438
CXD91_RS17780 3682934 .. 3682989 -  -9.8  -3.13403   GGCGGCCGACGAAGA GGCGTACGCGCCGCTGCG-CGGCCAGGCG GCG CGCTTTGCCGACGC-GCGGCGC--A-GCC TCTGGCTGGTGCTGG  60 53
CXD91_RS17765 3679720 .. 3679730 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 54
CXD91_RS17760 3678554 .. 3678591 - -10.6  -3.53224   TAGCGCTGCGCGAAA  GCCGTGGCCGGGCGCAACG GCG CGT-GCGCCTGGCC--GGC  TGCTCCATGACCGGC  70 123
        gltS 3677283 .. 3677294 -  -4.4  -3.16881   GAGCCAGCGGATGAA                CATG GTCA CATG                 CCTCCCACGAACGGC  47 19
CXD91_RS17750 3675336 .. 3675350 -  -2.1  -3.14931   GCCAGCCTGGACGAA              GCCATC AAGG GA-GGC               GCGGGCATCGTGATC  43 455
CXD91_RS17720 3669368 .. 3669380 -  -6.9  -3.29144   CGACCTGCTGCACAA                GGGCA TCG CGCCC                AAGGCCCTGGTGTTC  52 187
CXD91_RS17695 3665793 .. 3665806 -  -4.5  -3.53733   CGGAGGTGATAAACA               CCAGT GATC ACCGG                GCGCTGTTCAGGCCT  52 33
CXD91_RS17690 3663576 .. 3663591 -  -6.8  -3.03124   GCTGACGGCGGAATA              CCTGCG CACG CGCAAG               CAGTTCGGCGTACCG  48 408
CXD91_RS17650 3655110 .. 3655168 -  -7.5  -2.70932   CCTGGCCGGCAAGCA CCAGC-C-C-ATGC-GCCTGGGCATGGCG TGGAT CCCCGTGCCCAGGCCGCGTCGCGTGCTGG AGGCCTTCATGCAGC  49 189
CXD91_RS17630 3649917 .. 3649927 -  -2.4  -3.17075   TGGTGGGCAACGCAA                 TCGG GCG CCGT                 GCATGGCCGTCCCGC  42 42
CXD91_RS17625 3648869 .. 3648882 -  -3.7  -2.56596   GTGTCGATCAATCGA               CGCTG ATGT CGGCG                ACGTTGGCGATGGTT  40 4
CXD91_RS17620 3647635 .. 3647647 -  -4.7  -4.20696   GGAGTAAGGGGAAAA                GCCGG CGG CCGGT                CAGGGAGGCTGTCCC  66 202
CXD91_RS17610 3644900 .. 3644914 -  -2.1  -3.17075   TCTGTGGGAACTCAA              CGAGGC CTTT GCCT-G               CCAGGTGCTTTATTG  43 267
CXD91_RS17595 NONE
CXD91_RS17590 NONE
CXD91_RS17585 NONE
CXD91_RS17580 NONE
CXD91_RS17575 NONE
CXD91_RS17570 3632367 .. 3632377 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS17560 3631345 .. 3631384 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD91_RS17555 3630207 .. 3630238 - -12.2  -3.03338   AGAAGTCCGCGAACA      GCAGGAGGAGCAGG CGCG CCTGGCCCGCCTGC       GCACCTTCGAACTGA  67 101
CXD91_RS17545 3628263 .. 3628289 - -11.5  -3.58231   AAAGAATGGACACAA         GCGGACGCCCG GCGCA CGAACGCCCGC         CGCGAAGGCGGGGTC  72 53
CXD91_RS17540 3627132 .. 3627142 -  -2.4  -3.14344   CAGGTCCTTGAGCAA                 GGTC ATC GCCC                 GCGCATCACAGATCG  42 31
        prmC NONE
        grxD NONE
CXD91_RS17525 3625343 .. 3625369 - -22.4  -3.64703   GCGGCCGTACGCAAA         GAAGCCTGCCCC ATC GGGGCAGGCTTC         AGGTACAGGCAGGCG 100 53
CXD91_RS17520 NONE
CXD91_RS17515 NONE
CXD91_RS17510 NONE
CXD91_RS17505 3619380 .. 3619395 -  -3.2  -3.17685   CAAGGACACATGGAA              GGTGTT AGTG AACTCC               ATCGACAAACTCCCC  44 14
CXD91_RS17500 3618825 .. 3618873 -  -7.9  -3.14132   CTGCGCCTGCAGCAA CACAGCCTGCGCATCCGGGCTG ACCACG CTGCCCGCGGGCGC-GGCCGCG GCTACAGGCGCCGCG  54 130
CXD91_RS17495 3618561 .. 3618585 -  -7.8  -2.91582   CACTGCACGGACAGA         CGCCAGTTCCC ATGC GGGA-CAGGCG          CCTCGCGTATCGGAA  52 61
CXD91_RS17470 3613378 .. 3613421 -  -9.5  -3.44222   CAAAGCAGCAAGTAA CGCCACGG-TGCCTGTCCCC CTTGC GGGGACTGGCACCCACACCG AACCCCGCCCTACCG  63 35
CXD91_RS17425 3605930 .. 3605960 -  -8.2  -3.53012   GCTCGGCGCGGGAAA      GGCGCCTGCCAGC GCCATG GC-GGCCAGCGCC       GGGATCAGGGATAAG  62 194
CXD91_RS17415 3602864 .. 3602880 - -10.8  -2.73875   GGTTCTGGAACACCA              CGCGCG CCACC CGCGCG              CCGGTCAGGACCTTC  60 372
CXD91_RS17405 3600474 .. 3600491 -  -8.3  -3.90112   GGTTTTTCAAGGAAA             GGCCGCC TGGC GGCGGCG              CGGCCCTGCCCTGTC  70 41
CXD91_RS17400 NONE
CXD91_RS17395 NONE
        aspS 3597448 .. 3597480 -  -9.8  -3.64703   GGCGCGTTATCGAAA     CGGGCGAAGCCACGC CATT GCCCGGCCT-GCCCG      ATTCCGGCCGCTGGC  70 81
CXD91_RS17385 NONE
        clsB 3595263 .. 3595275 -  -6.2  -3.14132   TGGTTCCTGGACGAA                GCGG TGACG CCGC                GCATCCTGGCCGGCG  50 111
CXD91_RS17355 3590268 .. 3590311 -  -8.1  -3.18199   TAAGGCGCAAGGCAA GGCGCGGACAGCGTCCGCCGGC GAG GCCGGCGGACGCCG-C-G-GTT TACTGCAGCGGTTCG  54 25
CXD91_RS17350 3588879 .. 3588903 - -10.7  -2.71011   ACGCCGGCTGAAGCA         CGGCGG-CGC GGGCTG GCGGCCGCCG          CGCTTCAGGCGGCGT  60 30
CXD91_RS17340 3586821 .. 3586851 - -10.3  -3.43446   CGATACCGAACAATA       GACCAGGCGCGGG TTGCG CGCGCGCATGGCC       TGCTGCCCCAGCCCC  65 374
CXD91_RS17330 3585094 .. 3585112 -  -8.1  -3.47227   CGGCAAGGACGACAA            GGCGCGCG GCAT CG-GCGCC             GGCCTGTCCGACGCG  58 209
CXD91_RS17270 NONE
CXD91_RS17265 3572378 .. 3572405 -  -7.6  -3.22884   GCACGAAGGCATCAA        GTCGCTGCGCGAG AAG CGCGCGCCG-GAC        TTCCGGTAAGGGGGC  56 114
CXD91_RS17255 NONE
CXD91_RS17250 3570123 .. 3570154 - -13.1  -4.20516   GGGGGACGGAAGAAA      CGTCGCGTCT-GCC AGACA GGCCAGACGCAACG      CGGCGGCGCCGCGAG  91 149
CXD91_RS17240 3567239 .. 3567270 - -17.2  -3.53012   TGGTGGTCTTCGAAA      GACCGGTCCGGCCG TCGC CGGCCCGGCCGGTC       AGATAGGTTGGGCCA  89 24
CXD91_RS17235 NONE
CXD91_RS17230 NONE
CXD91_RS17225 NONE
CXD91_RS17220 NONE
CXD91_RS17215 3561465 .. 3561492 - -21.4  -3.62597   CGGAGGGGGGAACAA        GGTGCCTGTCCC CACG GGGACAGGCACC         CACGCCCTTGGTGCA 100 56
CXD91_RS17135 3544322 .. 3544346 -    -7  -3.01791   ATCGCCGGCCGAACA          GGTGGCGGCG ATGGA CGCGGCCAGC          TACTTCAACCTGTTC  51 234
CXD91_RS17120 NONE
        folB NONE
        ttcA 3538221 .. 3538231 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS17100 3537072 .. 3537091 -  -3.4  -3.30124   GCGCACGCTGGACAA            CGTGCTGC TTAC GCCGCACC             TGGGTTATGTGAACG  47 151
CXD91_RS17070 NONE
CXD91_RS17065 3530734 .. 3530759 -  -6.7   -4.7497   GGCATGCAGCAAAAA         GCCCGG-TCCAG TTA CGGGTTCCGGGC         TTGGCGCTGCACTTC  84 212
CXD91_RS17060 NONE
CXD91_RS17055 NONE
        trpD NONE
        trpC 3526646 .. 3526678 - -12.6   -3.8186   CATCGCAAGGAAGAA     GCGGGCGGCGCGCCG GCGC CGGCGCG-CGGCAGC      GGCCGCTGAGGCCGG  81 55
CXD91_RS17030 3522783 .. 3522815 -    -9  -3.04322   GGCAACTGGCCAAGA      TGGCCATGCGCGCC GAGCA GGCGCGCAGCGTCA      TGTTCCAGACCGCCC  57 46
CXD91_RS17020 3520582 .. 3520623 - -10.1  -2.78463   AGCGCGTGGACCACA CCATGACGGCCGCCGACCTG ACC CAGGTGGGCAGC-GACATCG AATCGCTGGTGCTGT  56 113
CXD91_RS16985 3514333 .. 3514368 -   -19  -3.14132   CTCTTCCCGCAGGAA    TCCGGGTGCCTGTCCC AGCG GGGACAGGCACCCCGT     CATACGCCAGCACGC  90 76
CXD91_RS16970 NONE
CXD91_RS16965 3509905 .. 3509923 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 202
CXD91_RS16940 3500640 .. 3500659 - -12.8  -5.60993   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTACCTGTAA 100 51
CXD91_RS16930 NONE
CXD91_RS16925 3496779 .. 3496835 - -16.4  -2.80398   GAATGAATGCAAGCA TGGCAACTCGATACGGGGTGCGGCGCC GCCA GGCGCCGCACCCGGGA-CGGGACGCCG GCGCGCAACGTCCCT  77 49
CXD91_RS16920 3495376 .. 3495425 -  -6.4  -3.73775   CCGACGCCGACGAAA CCGACG-ACGCCG-CGCCGC ATGTCCAGATGG GCGGCGCCGGCGCGCGCCTG CTGGGCGGGCGCGGC  59 171
CXD91_RS16910 3493983 .. 3494038 -  -2.5  -4.45175   CAGGAAAAAAGGAAA GGGAGATGTCGCGCAGGATC-TGCCGC TTGG GCGGCACGATCTTGC-CGACACGGTTC ATCGTGTAGACGTAT  67 143
CXD91_RS16895 3491518 .. 3491533 - -11.8   -4.7497   GGCAGCCACGAAAAA              CCCGGC CGAA GCCGGG               TTTCTCGTTGAGGCG 100 66
CXD91_RS16890 3490146 .. 3490184 - -20.3  -3.25113   CCGCAAAACTGAATA   CTCGGGTGCCTGTCCCC GCACG GGGGACAGGCACCCGCT   GAATCTTGGTCCCCG 100 68
CXD91_RS16865 3484358 .. 3484385 -  -9.2  -2.61582   GACCCCACCCAGAAC        CCGAAGATCCAGC GCG GCTTGATCT-CGG        TGCGGGCGCGGATAC  54 390
CXD91_RS16840 3479078 .. 3479089 -  -7.2  -3.95456   AAACGGAACAGGAAA                GGGC CGCG GCCC                 CGGGAACTGGCTAGC  66 36
CXD91_RS16835 3477714 .. 3477756 - -14.1  -2.78384   CTGGTGGCCATGATA GGCGC-GGCCAAGGCCGACG GCCA CATCGGCCCCGACGAGCGCC AGTTGCTCGAAACCG  67 302
CXD91_RS16825 3476611 .. 3476629 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 214
CXD91_RS16800 3471555 .. 3471568 -  -2.3  -3.02166   GCCGGAATGAAAGTA               CGGCA TTAT CACCG                GCCCGGATCGTCGGC  41 20
CXD91_RS16795 3470853 .. 3470887 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS16760 NONE
CXD91_RS16755 3461715 .. 3461727 -  -9.1  -3.02511   GCGAGGCGTTCAATA                TCGCC AAC GGCGA                CGTGGTGCTGTGGCA  55 368
CXD91_RS16720 NONE
CXD91_RS16715 NONE
CXD91_RS16710 NONE
CXD91_RS16705 3453083 .. 3453136 -  -4.3  -2.94144   CCGGCAGGTAAAGGA CGATGA-CGGCCAGCGGCAGGAGCGC GGC GCGGCGCAGCGGCAGGCGGATCATCA GTGCACCCCCCGCGC  44 23
CXD91_RS16700 NONE
CXD91_RS16695 NONE
CXD91_RS16690 NONE
CXD91_RS16685 NONE
CXD91_RS16680 3447768 .. 3447804 -  -7.9  -3.85698   GGCGCCGCTGACAAA   GGCGCTGCG-GCCGGC CAGCGC GTCGGCGCGCAGCACG    CGCAAGTCATCGATG  66 110
CXD91_RS16670 3445981 .. 3445995 -  -3.4  -3.78934   GCGGTTGGAGAACAA               CCGCGA AAG CCGGGG               ATCGTTGCGGGTATC  56 202
CXD91_RS16660 NONE
CXD91_RS16655 NONE
CXD91_RS16630 NONE
CXD91_RS16625 3435382 .. 3435409 - -11.4  -4.50976   GTCCAGATGAGAAAA        GCCCGCA-AAACC TGA AGTTTATGCGGGC        TTTCCGGGGCGCTAC 100 63
CXD91_RS16620 3434838 .. 3434857 -    -7  -3.08679   CGGCTCGATGCAATA            GCGCCCGC CTTC GCTGACGC             GTTCTTCAGCTACGG  52 35
CXD91_RS16605 3433771 .. 3433781 -  -3.2  -3.41602   TGCATGGTATCACAA                 TACC CAG GGCA                 TTCATTCCATCACCC  48 27
CXD91_RS16600 NONE
CXD91_RS16595 3432324 .. 3432357 -  -4.6  -4.36411   CATGAATGACGAAAA    TCC-CGACCCGG-TGC TCAG ACAACCGGGTTGTGGA     CGGTAATCAGCTTGG  69 6
CXD91_RS16590 NONE
CXD91_RS16585 NONE
        ureC NONE
        ureE 3428955 .. 3428982 -  -6.8   -3.1372   CAGGCCCTACGAATA        GCTGAAGCCGCC GATC GGCAGCGCCGGC         GAAGACAGATGCAAC  52 62
CXD91_RS16570 NONE
        ureG 3427551 .. 3427591 -  -8.7  -3.58726   GTCCTCTATATATAA  CGGCAGGCGCGCCGGCCCG CAC CGAGCAAGCGCGTGCGCGG  GAATCTTCGGCAAGC  62 99
CXD91_RS16520 3414549 .. 3414566 -  -9.1  -3.16564   CGCCTATTCGACCAA             CCGCGTC ATCG GACGCGA              CAACGCCCTGCCCTG  56 422
CXD91_RS16500 3411755 .. 3411778 - -16.8  -6.06723   GCGGCGAAAAAAAAA          GCCCGAGATC TTGC GATCTCGGGC           TAAATCCACCAAAGG 100 465
CXD91_RS16495 3410299 .. 3410309 -  -6.8   -3.1506   AAATCTCCCTATCAA                 CCGT GTG ACGG                 CTACGGAATTGTATG  52 102
        tviB NONE
        tviC 3407973 .. 3407985 -  -4.8  -3.51232   TGGCTTTCAAATCAA                CGCA GGAAT TGCG                TGTACCAGGGCATGG  52 9
CXD91_RS16480 NONE
CXD91_RS16475 NONE
        asnB NONE
CXD91_RS16465 NONE
CXD91_RS16460 NONE
CXD91_RS16455 3399765 .. 3399792 -    -9  -2.60571   AAGCGCTCAAGGAAG        CGCGGCTGGTCG AGTC CGACCCGCAGCA         GGCCGAGATCCTGGC  51 325
CXD91_RS16440 NONE
CXD91_RS16435 NONE
CXD91_RS16430 3393993 .. 3394018 -  -3.1  -3.54543   ATCCATTGCCGGAAA         CAGGCCGTGCA CTCA TGCGCCACCCG          CCGGCAGCGCCAGCC  49 12
CXD91_RS16425 3392598 .. 3392624 -  -5.9  -5.40072   CTCGTTGCAAAAAAA        GACGCGCAAGCA TACC TG-TTGGGCGTC         AAATCGATGTCAAAT  95 87
CXD91_RS16420 3390366 .. 3390385 -  -7.1  -3.16564   GCTGGAGCTGACCAA            CG-GCGGC AAGCA GCCGCTCG            ACCTGCCCTGGGGCG  53 285
CXD91_RS16405 3386576 .. 3386602 - -10.8  -3.18582   GACCTCAGCGACGAA         CAGAGCCGCG AGCTGAA CGCGGCGCTG         ATCCTGCTGCTGGCC  64 131
CXD91_RS16380 NONE
        lolB 3380307 .. 3380323 -  -6.5  -2.52896   TCACGGCGGAAGCGA              GGGGC TGGGGAT GCCCC              TATTCTAGACCGCCG  45 46
CXD91_RS16370 NONE
CXD91_RS16365 3379258 .. 3379300 -  -4.2  -5.79595   TCGTAAAACAAAAAA GCTGCTGAACTGGAGCCAGT GTCTG ACGGGCG-C-GTTCAACAGC TTTTTTATGTATTGG 100 43
CXD91_RS16360 3378157 .. 3378181 - -12.8  -4.07885   GATCGCCGGTTAAAA          CACGCGGCGC GACAT GCGCTGCGTG          GTTTTTGCGCGCCGC  83 81
CXD91_RS16355 3377408 .. 3377446 - -24.8  -2.91695   CGTATTTGTAAAGTA   CAAAACCCTGCGCATGCA AAT CGCATGCGCAGGGTTTCG   GGGACGTCGGGCACG 100 79
CXD91_RS16350 NONE
CXD91_RS16345 NONE
        ychF 3374761 .. 3374779 -  -6.7  -3.05816   GTATTGTTTATGCAA             CCCATTG ATTTA CAACGGG             CCAATCTGTCCACCA  51 78
CXD91_RS16335 3373356 .. 3373383 - -16.4   -3.4285   GCACTCAAGGGACAA        CGGCCCTATCCT GAAA AGGATAAGGCCG         TTCTACCCACTTCGC  85 67
CXD91_RS16330 NONE
CXD91_RS16325 NONE
CXD91_RS16320 NONE
CXD91_RS16315 NONE
CXD91_RS16310 3364595 .. 3364608 -  -3.1  -2.79183   GCTATCTGTATCATA               CG-GAC TCC GTCTCG               CCGAAAAGGTCACCA  40 7
CXD91_RS16305 NONE
CXD91_RS16300 NONE
CXD91_RS16295 3362719 .. 3362730 -  -5.8  -2.89475   GATCGACATAGCAGA                GCAG CAGA CTGC                 CAGCGGTCTTATGGA  46 240
CXD91_RS16260 3352293 .. 3352320 - -10.5  -3.08679   CGGGGCCAGGCAATA        GGCGAGCGCTCC CGGCC GGCGCGC-CGCC        GGCGCCGCGCTTGGC  62 49
CXD91_RS16250 3349713 .. 3349740 - -13.4  -3.34398   TGCCGCCTGGAAAGA        CCTGCTGCTGCC GCGC GGCAGCAGCCGA         TATGAAGAACTGCGC  74 237
CXD91_RS16220 3344527 .. 3344545 -  -4.6  -2.78596   GATGTTCGGATTATA             CCTACA TGTTTTC TGTAGG             TATATATATTTTCTG  43 85
CXD91_RS16215 NONE
CXD91_RS16210 NONE
CXD91_RS16205 3340812 .. 3340830 -    -3  -3.01001   TAGCGGGAAATGACA             GTCATGGA GTC TCCTTGTC             GTTGTATGCGAGGGG  42 163
CXD91_RS16200 3339756 .. 3339796 -  -4.7   -3.2794   GTCCATGGACACCAA TGG--GCCGGGCTGCGGGGC TTGC GGCCCGCA-CCCGGTAGCCA CCCGCAAGCCTAGTT  49 35
        modA 3338579 .. 3338623 -  -9.2  -2.64616   TGCCCAGGTAGACGA GGTAGGCGCCGCCGATCC ATTTCAGCA GGATCAGCGCCGGCGACC AGGCCTTGAGCAGGG  54 302
CXD91_RS16185 NONE
CXD91_RS16180 NONE
CXD91_RS16175 3336481 .. 3336509 - -11.6  -3.30771   GTACAGGGCCGAGAA        CGGGCCGCGCAG CACTT CCACGCGGCCGG        CCGAGCCGATGTCGA  68 419
CXD91_RS16165 3334172 .. 3334183 -  -7.2  -5.30616   CGAGGGAAATAAAAA                CGCC GGAA GGCG                 GTGGTTCATGGACTG  95 113
CXD91_RS16160 NONE
CXD91_RS16155 3333600 .. 3333626 - -13.7  -3.09831   CGTACCGCAAAAGGA        CG-CGGCCGCCC CGGG GGGCGGCCGTCA         TGGGGCGAGACCGAC  73 51
CXD91_RS16145 3331985 .. 3332001 -  -5.7  -4.36914   GTCGCGCCCACAAAA              GCAGGCC CGC GCCCCGC              CCGCTTAGCGGACCT  72 30
        modA 3331095 .. 3331105 -  -2.4  -2.61264   CTGGTCAGCGACAAG                 GGCG GGA CTCC                 TGCAAGGGGTTACAG  38 35
        modB NONE
        modC 3328900 .. 3328923 -  -5.2  -3.72576   TGCGGCTTTACGAAA          TGCGGCGCAGC TAC GCCGGGCC-CA          AGCCGCAGGGCAGGG  58 394
CXD91_RS16115 3325400 .. 3325421 -  -6.5  -2.87132   TCCTTGCCGCATATA           GCGGCGCAT ATGC ATGCGCCAG            GCCGAACAAGGGAAA  48 257
CXD91_RS16110 3323631 .. 3323681 -  -5.1  -2.50034   CATGAAGGGAAAACG CCCGGTGGAGCGCAGCGGCGCGGG CAGG CCCGCGCCGC-ATGGTCCGGTTGG GTCAGGCCTTAGCCG  44 34
CXD91_RS16105 3322351 .. 3322368 -  -9.1  -3.14132   TCCGGCGCGCATCAA             GCC-GGCG CTG CGCCAGGC             GCGCTTGCAGGCGCT  56 68
CXD91_RS16090 3318453 .. 3318477 -  -8.4   -4.1899   CGACCCTAGGGAAAA          CCCCGGGAGG ACGGG CCGCCCGGGT          TGGCGTGTTCAGCGC  76 34
CXD91_RS16085 NONE
CXD91_RS16080 3315774 .. 3315789 - -11.8  -5.18357   GAAGGCATGAAAAAA              GGCGGC CGCG GCCGCC               TTTTCCGGATGGACA 100 50
CXD91_RS16075 3314511 .. 3314545 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 259
CXD91_RS16035 NONE
CXD91_RS16030 3306020 .. 3306038 -  -2.2  -3.57263   ATTCCGACGCGGAAA             GCCCCTGG ACG CCCGGGAT             GGCCGCCGTTTCAGT  48 36
CXD91_RS16025 NONE
CXD91_RS16020 NONE
        xerC 3302935 .. 3302970 -  -8.9  -2.80816   GCCTGATCGAGTACA    CGCAGCGCGACGCCGA GTTCA CCGGCGTCGAGG-GCG    AAGTCCGGCACCGCT  52 436
CXD91_RS15980 3296134 .. 3296160 -  -3.8  -3.93556   ATCGATGCAACGAAA         GAAGATGG GGGCGGAATTT CCATCTTC         AAGAGGGGACGGAGC  59 76
CXD91_RS15975 3294700 .. 3294716 - -10.1  -2.57795   TCCACTATGAATCGA              TCCGGGC GCG GCCCGAA              TATTCGCGCCTGGCT  57 128
        dksA 3294138 .. 3294161 - -13.2  -5.07652   GGTCCGAAAACAAAA          GGGCTATGCC GTGG AGCATAGCCC           TGGTAATGCGTTCGG 100 76
        hslV NONE
        hslU 3292162 .. 3292187 - -11.9  -3.81027   TCCAAGTAAGGGAAA         GGCCGCGCTACA GCA CGTAGCG-GGCC         AGGTCCTGGCTGCCG  79 7
CXD91_RS15945 3290816 .. 3290826 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD91_RS15940 3289794 .. 3289833 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAC CTAG GTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD91_RS15935 3288407 .. 3288424 - -11.3  -2.56596   GCGCGCATCAAGCGA             CAGCGCA TCGA TGCGCTG              CCTGGCCAGGGCCAA  59 364
CXD91_RS15900 NONE
        zapA 3281228 .. 3281242 -  -2.8  -2.95102   ACGGCAGGGACAAAC               CATGAA TAC TGCATG               AATACTGCGCGCGAG  42 55
        ssrS 3281004 .. 3281038 - -12.3  -3.05993   GGAGGGAGAGAGACA    TCCGAAGGCAGGCCTGC GAT ACAGGCCTGCCT--GGA    TAGATGCCCCGCCTG  67 27
        ilvD NONE
CXD91_RS15865 NONE
        msrA 3275209 .. 3275240 - -10.8  -3.69256   AGGCACCGAAGAGAA      GGGGCAGATCCAGG AATA CCTGGACCTGTACC       GCGGCGAAGGCATCC  74 458
CXD91_RS15850 3273586 .. 3273600 -  -4.9  -3.56643   CGGAGATCCTGCAAA               CCGCA TGATT CGCGG               TTCCGGCTTCGTCGC  52 289
CXD91_RS15845 NONE
CXD91_RS15840 NONE
CXD91_RS15835 3271103 .. 3271141 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD91_RS15830 3267868 .. 3267878 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 3267659 .. 3267693 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD91_RS15820 3266696 .. 3266716 -   -14  -4.54727   GCCTGCAAACGAAAA            CGGCTGGC ACGAA GCCAGCCG            TTGCGAGCGGAACCG 100 56
CXD91_RS15810 NONE
CXD91_RS15805 3263407 .. 3263461 -  -9.9  -3.56862   AGAAACCCGCCGAAA CCGCCAAGCC-CGCCGCGGCGCGCC CCAAGCC GGTGCG-CGCGGCACGGCTGAGCGC CTGGGATCTGCGCGA  67 285
        rnpB 3261313 .. 3261333 - -19.7  -2.52464   GGGCGCCGTAAGCCA            GCCGGCCGG ATT CCGGCCGGC            TGTCATGAAAATGCA  93 41
        mraZ NONE
        rsmH NONE
        ftsL 3259251 .. 3259272 -  -6.5  -4.16016   GGATTGTCGAAGAAA           GGCACCC-GC CTC ACTGGGCGCC           TCCGGCGGGCTGGTT  66 14
CXD91_RS15775 NONE
        murF NONE
CXD91_RS15765 NONE
CXD91_RS15760 NONE
        ftsW NONE
        murG NONE
CXD91_RS15745 NONE
CXD91_RS15740 3247391 .. 3247403 -  -3.3  -2.87132   GCGTCGTTCCACACA                GAGCG TCC CGTTC                AATCTTGTCGCGCCG  41 24
CXD91_RS15735 NONE
        ftsA 3245224 .. 3245235 -  -3.6  -3.55622   GTGAATCGCCTCAAA                GCCG AAGC CGAC                 CGTGGTCCGCAACGG  51 127
        ftsZ 3243768 .. 3243779 -    -3  -3.63968   TGCGAAAGCCGGAAA                TCTA CCAA TAGA                 CACCGGCATAACCGG  53 210
CXD91_RS15720 3242757 .. 3242785 - -14.6  -4.57073   CATCCCCGCCAAAAA        GCCTATGGCCGC TCAGC GCGGCCATAGGA        CGAAAACCGATATCG 100 52
CXD91_RS15710 3241101 .. 3241126 -  -5.4   -3.5394   AAACCCGCCGGGAAA         CGATCCAGTT TAACGC ACCTGGACCG          CAACGGCCTGCCGTG  54 77
        secA NONE
CXD91_RS15700 3237378 .. 3237391 -  -5.9  -4.19704   TAAGGTCAGTGAAAA               CGGCC TGCC GGCCA                TCCATGGATCACGCA  70 161
CXD91_RS15695 3235984 .. 3236015 -  -8.6  -2.82635   ATCCCGATCACTACA      GCCG-GCACGTCGCC TAC GCCGACCCGCACGGC      AGCTTCACCATTGCC  53 368
CXD91_RS15685 3234860 .. 3234882 -  -4.8  -2.57132   GCCCTTTTCGATAAG           GGGCGC ATTATGCCGCA GCGCCC           GCGCCGCGCGTGCGC  42 10
CXD91_RS15680 NONE
CXD91_RS15675 3232993 .. 3233024 -  -4.3  -2.62396   TACCTTGCGAGATGA      CGGGCCTGGCATG CCCCGC CAGGCAAAACCCG       TTCACGGCGCACGCC  42 79
CXD91_RS15670 3232082 .. 3232100 -  -6.7  -4.37092   ATGGTTTCCAGAAAA            TCGGCCGC ATCG GCG-CCGA             TACCCGCCTGGGCAT  72 212
CXD91_RS15630 3224331 .. 3224344 -  -5.9  -3.20991   TCCAACCGAATTCAA               GCCGA CAGG CCGGC                CACGCTGCGATCCAG  51 8
        aroQ NONE
CXD91_RS15620 NONE
        accC 3221472 .. 3221522 -  -8.8  -2.55668   GAGTTCGATATGAAT CGCGTCG--CGCGCGGCGTCGGGC ACCAG GCCCGGCACGGCGGGGTCGTCGCG GTGCCAGCTGGGCAC  52 422
CXD91_RS15605 NONE
CXD91_RS15600 NONE
CXD91_RS15595 3218186 .. 3218204 - -13.1  -5.40072   GCCGCCGCAAAAAAA             CGCCCGC ATGAA GCGGGCG             TCTTGCCGGAAGCAG 100 48
CXD91_RS15590 3217651 .. 3217688 -  -4.8  -2.78384   CGGCGCCCCAGTACA  GGCC-CAGCGAC-AGCGC GACG GCGCTTGCCATCGCGGCC   AGGTGGGACAGCAGG  43 44
CXD91_RS15585 NONE
CXD91_RS15580 NONE
CXD91_RS15575 3215278 .. 3215293 -    -6  -2.56838   TAGATCGAAATACAT              GCCGCG CACT CCCGGC               GGATCAGATAGGACT  46 29
CXD91_RS15570 3213818 .. 3213830 - -10.5  -3.53091   ATTCGGCGTCTGAAA                CGGCG CTA CGCCG                CCGCCGGAATCGCTG  67 18
CXD91_RS15540 3204209 .. 3204224 -  -3.3  -3.53012   TGTTTTCGCCGCAAA              CGAAA TATTTG TTTCG               CATTATAGGGATTAC  49 155
CXD91_RS15535 3203555 .. 3203569 -  -5.6   -4.6951   ACCACGCAAAACAAA               CACGAC AGC GCCGCG               TGCCGGACTGCCGAC  77 185
CXD91_RS15530 3202944 .. 3202999 -  -3.3  -3.40522   ACTTTCGGACGACAA CGACATGGCGGGTAGCGGCGGC-GACGT GGG AAGTCCGCCACCT-TACCCGA-ATGGCG CGCCGCTGGCGACAA  48 44
CXD91_RS15525 3201482 .. 3201504 - -11.2  -3.01712   GTTCTGCGGCGAATA           CCAGCCCGCC CCC GCCGAGCTGG           CGGCCCAGCACCTGA  62 283
CXD91_RS15515 3197557 .. 3197591 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS15495 3194133 .. 3194143 -  -2.4  -3.78934   TGTTGGTCACAATAA                 GGCG GAT CGCA                 GAGGATCGCGAAAGA  54 126
        dbpA 3192745 .. 3192759 -  -4.2  -3.28712   CCGCCGCGCTCAGAA               CTCTTC CAG GAAGCG               CATGCGGAACCGCCG  47 5
CXD91_RS15485 3191719 .. 3191748 -   -12  -3.16564   CGTGCAGCCCATCAA       CCGGCTGTGCGC CGCGGT GCGCGCCGCCGG        CGGCAGCGTGGTCTG  68 521
        pmbA 3185907 .. 3185932 - -19.1  -3.02096   GCCATGAACGAGACA         GTGCCTGTCCC CACG GGGACAGGCAC          CCTGCCGGCGCCGGC  90 51
CXD91_RS15445 3184465 .. 3184499 - -21.5  -3.53012   GGCGTTGCGCCCAAA    CAG-CAGGGGCCGCCC CGAA GGGCGGCCCCTGGCCG     GACCGAAACGGCGGC 100 45
CXD91_RS15440 NONE
CXD91_RS15435 3183357 .. 3183386 - -20.9  -3.28791   ACCGGGGCGCCATAA       GCAAAAAGGCCGC TTTC GCGGCCTTTTTGC        GGGACATTAGCGCTT 100 32
CXD91_RS15430 NONE
CXD91_RS15425 3181334 .. 3181353 -  -4.2  -2.80074   GCCCGGATAAGATCA            CTATAGCG CAGC CGCGACAG             GACTCAAAATTCCAG  41 29
        erpA 3180845 .. 3180870 - -18.3  -4.54727   GCGCCCAAACGAAAA         GGCCCTCCGGC GCAT GCCGAAGGGCC          TCGATCGCGGACCGG 100 53
CXD91_RS15400 3175728 .. 3175738 -  -4.6  -3.30124   TGGGACCCTCGATAA                 GAGG CTA CCCC                 ACCAACTTAACACGC  49 19
CXD91_RS15395 3174992 .. 3175013 -  -2.9  -4.62069   CGTCTACCGCAAAAA           TGCCTCAAG TCGG CATGAGCCA            GGCTCAAGCAAGCCC  71 52
CXD91_RS15390 3173518 .. 3173539 - -15.9  -5.30155   CCATCAATGAAAAAA           GACAGGCCC TTGC GGGCCTGTC            TTGCCGGCGGCGGGC 100 59
        nrdR 3172604 .. 3172628 -  -8.6  -2.90194   ACGGCCGCAACCACA         TGCACCCCGGC GTGC ACCG-GGTGCA          GGACGCCATCGTGCA  54 330
        ribD 3169958 .. 3169972 -  -9.2   -2.9006   AACCCATCGGATAGA               CGCGCG CCA CGCGCA               CCGCGTTCCGATCGC  56 98
CXD91_RS15350 NONE
CXD91_RS15345 NONE
CXD91_RS15340 3165588 .. 3165630 -  -2.5  -3.72576   CGCTGGCGCAGCAAA GCTGCG-CGCGGCTGGCCGAC CTG GACGGCCAGC-GCTTCATCGC GTTCTCGCGCGAGAA  53 380
CXD91_RS15330 3163655 .. 3163689 -  -6.3  -3.65522   CATGCAGGGCAACAA    CACCGGCCTGCTCGTCG GTC CGGCG-GT-GGCCGGCG    CCATTGCCGGCGCAT  57 138
CXD91_RS15320 3161561 .. 3161606 - -15.3  -3.05498   CATGCGATATATATA CACCGGC-CGGCGCGGCCGATG CGG CGTCAGCCGCGCAGCGCCGCCG CGCCTTCGCGCAGGC  77 6
CXD91_RS15310 3159859 .. 3159894 -   -19  -2.99319   AATGTCGGAGAGAGA    GGGGGGTGCCTGTCCC CGCC GGGACAGGCACCCCTT     GCCACGGGTCGGGAC  90 93
CXD91_RS15305 3158636 .. 3158666 -  -7.4  -2.66969   TATCAAGACAACGGA       GGGAGCGCGGATCG CAG CGATCCGCGGCAGC       GGTTTCCCGGGCGGC  50 175
CXD91_RS15300 NONE
CXD91_RS15295 3156867 .. 3156880 -  -4.5  -3.35813   CTTGATTTCAATCAA               GCTGCG CTT CGC-GC               TCCGGGCCGGGCTTC  51 4
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD 3152709 .. 3152742 - -28.3  -3.86015   CACCCCCGCCACAAA     CGACAACCCCCCGGG CAAG CCCGGGGGGTTGTCG      GCGAACCAAGGCCGG 100 74
CXD91_RS15240 NONE
CXD91_RS15235 NONE
CXD91_RS15230 NONE
CXD91_RS15220 3141534 .. 3141550 -  -5.7  -3.44229   AGCTTACGACGACAA              GGCGCGC CCG GCACCCC              CGGGATTGCACCCAG  53 54
CXD91_RS15215 3140792 .. 3140842 -  -2.3  -2.62184   CCGGCGCCTACATGA TGGCCCAGGCGATGGGC-GCCG-GC CTG GCGCGTCCGCCCGTCGGCTGGCACG TCATGGCCGGCCTGG  38 227
CXD91_RS15205 NONE
CXD91_RS15200 NONE
CXD91_RS15195 NONE
CXD91_RS15190 3137979 .. 3137989 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS15185 3136688 .. 3136712 -  -4.1  -3.53012   TTCGGTTCGGCCAAA          TCGGTGCGC GCCCCCA GCGCTCCGG          TACGCCGCAAGGCTG  49 288
CXD91_RS15175 3135558 .. 3135569 -  -3.6  -3.48395   ATTCCGTCTATAGAA                CGCG ATGA CGCA                 GGGCAGGCAGGCTGG  49 6
        tldD 3134021 .. 3134038 -  -6.9   -5.9873   CTAGCACAAAAAAAA             CCGCGCG TCAC CACGCGA              TTTTTCCAGGCCAGG 100 66
        aroG 3132447 .. 3132467 -  -9.7  -2.52464   GCCGGCGCGAATCCA            TCATCGGGG CAG CCACGATGA            AGGATTACGCCTTGT  55 307
CXD91_RS15155 3118481 .. 3118503 - -19.2  -4.72272   GGCGGGCATGAAAAA           GCCCACGCGA CCT TCGCGTGGGC           TTGCCGGGCACCGCG 100 57
CXD91_RS15150 NONE
        glcE NONE
CXD91_RS15140 3114100 .. 3114135 - -15.4  -3.68619   TGGAATTCATCGAAA    CGCGCGTCAAGCCC TGGGTGGC GGGCACGACGCGCG     TCGATACCGGCCGCC  88 408
CXD91_RS15125 3110175 .. 3110212 - -20.5   -2.6563   CCGTGGAATAAGGCA   CGGGGCC-GGTGCGGCGC ATG GCGCCGCGCCGGGGCCCG   CCTAACGGCGCGCGC  95 27
CXD91_RS15095 NONE
        mnmA 3102833 .. 3102865 - -11.1  -3.73775   CCCAGGTTTATGAAA      CCGCTGTGGCGGCCG CGG CCGCGGCCACCGCGA      GACCGGCGCGCCTCC  73 63
CXD91_RS15085 3101892 .. 3101947 - -24.2  -3.05596   GACCGCCTGACCGAA CCGGCGTGCAATGAAAAAGGCGGCTC GCAT GAGCCGCCTTTTTCATTGCCGGCCAC CCTGGCCGCCGACCG 100 62
CXD91_RS15075 NONE
CXD91_RS15070 3099166 .. 3099181 - -10.4  -5.96521   ACGAACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTGCCTTGC 100 62
CXD91_RS15055 NONE
CXD91_RS15050 3095459 .. 3095493 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS15030 NONE
CXD91_RS15025 NONE
CXD91_RS15020 NONE
CXD91_RS15015 NONE
CXD91_RS15010 3089293 .. 3089310 -  -2.6  -2.66869   ATATGGAAGAACTCA             CCGCCA TCTCCT TGGCGC              CGGCGCGCCGGCGCG  38 49
CXD91_RS15005 NONE
CXD91_RS15000 NONE
CXD91_RS14995 NONE
CXD91_RS14990 3085918 .. 3085959 - -14.5  -3.53012   GCTTGTCGGCCGAAA GCACGCGCGCCGCCGGCCT GTCCTG AAGC-GGCGGCGC-CGCGC GGACGCGGCGCGCCG  81 43
CXD91_RS14975 NONE
CXD91_RS14970 NONE
CXD91_RS14965 NONE
CXD91_RS14960 NONE
CXD91_RS14950 3078578 .. 3078633 -  -7.2  -3.06696   TCGCGTCGGAATACA GGCCCAGGCAGCCGTGGCTGATGCGC CCGC GCGGCTCGACCGCGGTGGCCTCGACC ATCACCAGGCCGGCG  51 205
CXD91_RS14925 3075020 .. 3075034 -  -3.5  -2.72344   TTCGAGTTCGAATTA              GCGCGC ATGG GCG-GC               CTCCAGCAGTTGGAC  41 8
CXD91_RS14920 NONE
CXD91_RS14915 3073275 .. 3073291 - -10.8  -3.31144   GCCCGAGGGCTACAA              GCGCCG CTCGC CGGCGC              TCGATACCTTCAGGC  66 35
CXD91_RS14900 3070261 .. 3070276 -  -2.5  -3.33696   CTCCTGGGTAATGAA              CCAGGC GGTCG GCC-GG              CTCAGTTGATCTGTA  44 27
CXD91_RS14895 3068833 .. 3068863 - -21.8  -3.23899   GCTCAAGTAAGGCAA       GCCGCCCGGCCGGC ACG GCCGGCCAGGCGCC       GCTCAGCGCGGCGCG 100 28
CXD91_RS14885 3066757 .. 3066793 - -23.8  -4.26076   GCACCGCCATGAAAA   GGCGCGG-CGGCCTCCC GCGA GGGAAGCCGTCCGCGCC    GGGATGAGCGGCGGG 100 70
CXD91_RS14880 3065868 .. 3065901 -  -8.7  -3.18681   CGCGAACCCGACGAA     CTGCTGACGCCGGCCC AGC AGGCCGGCAAC-GCCG     AGCACTACGCCCGCC  56 400
CXD91_RS14865 3062741 .. 3062783 - -12.6  -3.16564   GGGCTACCTGATCAA CGCGGCGACGACCACGCTGG ACA CCAGCACCATGTTCGCCGCG CTGATCAGCCTGGCC  68 140
CXD91_RS14830 3056959 .. 3056969 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 178
CXD91_RS14825 3055910 .. 3055924 -  -3.5  -2.53382   ACGAGGCGCAAGTCA               TGCCC TCGAT AGGCA               GGCTGATGGCGCCCG  40 56
CXD91_RS14820 NONE
CXD91_RS14815 3052695 .. 3052716 - -12.9   -3.8591   TCCTACAATGAATAA           CGGCGCGGG CACG CCCGCGCCC            GCGGATACCGACACG  83 52
CXD91_RS14810 3051285 .. 3051310 -  -3.1  -3.15544   GCTGATGCTGACCAA         GCGCGCCGCCA GCTA TTACGCCACGC          CGCAGATCGCCTTCG  43 186
CXD91_RS14800 NONE
CXD91_RS14795 NONE
CXD91_RS14790 NONE
CXD91_RS14785 3046419 .. 3046429 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 154
CXD91_RS14780 3044942 .. 3044952 -  -8.2  -3.13899   AAGCGTGCAGGAATA                 CGCC CTG GGCG                 GCATGTACGATTTCG  56 488
CXD91_RS14765 3041660 .. 3041694 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS14750 3039683 .. 3039696 -  -3.8  -3.53224   CATTTGCCCGTCAAA               GCGA TCAAAG TCGC                CGCGAACGCGCACCC  51 314
CXD91_RS14740 3037766 .. 3037781 - -10.4  -2.89881   TATTCATTCGACACA              CTGCGG CGAA CCGCAG               CCCTGTGCGCATTGC  59 243
CXD91_RS14730 3037344 .. 3037359 -  -6.1  -3.31461   CACCCACTGGGACAA              GCGTG TCTCGC CACGC               AAAGACACCCGGACC  53 55
CXD91_RS14725 3036089 .. 3036117 - -17.5  -4.11216   CCGCCATTTTTAAAA        GGCCTTGCAACGC ATC GAGTTGCAAGGCC        TTGGTTTCTAGAGCC 100 127
CXD91_RS14700 3033570 .. 3033580 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 65
CXD91_RS14695 3032386 .. 3032442 -  -7.9  -3.63694   AGGCAGCTTCAAGAA GCC-CGACGCCGGCG-TGCATGTCGGGCC GCT GGC-CGCC-CGCGGCGCCGGCGCGGTGGC CCTGAGCGTGCTCTT  60 149
CXD91_RS14675 3028650 .. 3028674 -  -5.6  -3.91897   CGTTGCACGGATAAA         GACGGGCC-GC GACG GCTGGCGCGCC          AGGACGAGGCTGTCC  63 51
CXD91_RS14615 NONE
CXD91_RS14610 NONE
CXD91_RS14605 NONE
CXD91_RS14600 NONE
CXD91_RS14595 NONE
CXD91_RS14590 NONE
CXD91_RS14585 3013317 .. 3013344 -  -4.7  -4.07568   CGGCGTGGCGGAAAA        GGCCGCCGCGT TCGTGC AGGCGATGGCC         GAGGTGGCAGGGGCG  63 253
CXD91_RS14540 NONE
CXD91_RS14535 NONE
CXD91_RS14530 3001473 .. 3001497 -  -3.4  -3.61517   ATTCGTCGTGAAGAA          GGATCCGGCC CTGAC GGCCGAAGCG          GTGCTGCAATGGTGC  51 154
CXD91_RS14520 2998537 .. 2998573 -  -5.1  -3.13403   GGTGCGGCACGAAGA  CGGCTCGCTGGCGAC-GC TGCG GCTGCTGCC-GCG-GCCG   CTGACGCGCACGCTC  47 132
CXD91_RS14510 2996617 .. 2996643 -  -4.3    -3.445   TTATGCAGGAAAAAC         GTGTCCTAAGC GCGCG GCTCAGGTCGC         CAGCTTCACGATTCC  51 17
CXD91_RS14505 NONE
        mgtE 2994536 .. 2994546 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 157
CXD91_RS14475 NONE
CXD91_RS14470 NONE
CXD91_RS14465 NONE
CXD91_RS14460 2985737 .. 2985753 -  -2.2  -3.13522   ATCGCGGGATCAATA              GGAGAA TTCAT TTCGCC              TTACCTGTCACGGGC  42 176
CXD91_RS14455 2984772 .. 2984785 -  -2.3  -3.09933   CGGCAAGCCATGCAA               TGCTG GCCC CGGCA                AGGGATAGCCCGCCA  42 190
CXD91_RS14450 2984332 .. 2984346 -  -7.1  -2.70932   TGGGTCTGCCAACCA               GGCTC TGTCT GAGCC               CTGTTACTCGGCCGC  48 29
        priB NONE
        rpsR NONE
CXD91_RS14435 2983104 .. 2983120 - -10.8  -5.75342   GCCCTCGAAAAAAAA              GCCGGC ACCAG GCCGGC              TTTTTTCAGGCATGC 100 48
CXD91_RS14430 NONE
CXD91_RS14425 2980652 .. 2980685 -  -2.9  -4.56597   CTGCGGCTCGAAAAA     GAGCCTGGCCAGCGG TATC CCGATGGCCCAGGTG      ATCTTTGCCGGACAG  71 160
CXD91_RS14395 2974595 .. 2974609 -  -2.1  -3.07935   ATCGGATTCATTTAA               GCAAA CCGTC CTTGC               GGAACATATCCTTGA  41 3
CXD91_RS14390 NONE
CXD91_RS14385 2971820 .. 2971857 - -28.5  -4.26076   GGACGGCCATGAAAA   GGCAACCCCCGGGCGCC TTGC GGCGGCCGGGGGTTGCC    CTTGCAAACAGCCTG 100 51
CXD91_RS14380 2971361 .. 2971385 - -17.1  -4.36914   GCTTGCGCGAGAAAA          GCCCGCCAGCA TCG CGCCGGCGGGC          TTTTTTTCACGGTTC 100 88
CXD91_RS14375 NONE
CXD91_RS14370 2968998 .. 2969015 -  -4.1  -2.52464   CGGTGCCCGAAGGCA             CGCAGGTC TTT GACCC-CG             TACCAGCGGTGGCTG  40 130
        garL 2964345 .. 2964362 - -11.3   -4.0616   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC  81 82
CXD91_RS14285 2955084 .. 2955105 -  -2.8  -3.25072   CGCATCATAACCGAA           CCGCCGCG CCGCCC CCCGGCTG            CCCGCAACGCCAGCA  46 109
CXD91_RS14280 NONE
CXD91_RS14275 2952937 .. 2952957 - -19.7  -3.75153   TGGCTGCAATGCAAA            CGGCCCGGC AGG GCCGGGCCG            TCTCGATCGCACGTG 100 47
CXD91_RS14270 2951442 .. 2951465 -  -6.6  -3.05343   CGCAGATGTCCAACA          GACGGACGCC AAAC GTGGTCCGTC           TATTCCGTGGACGCC  49 25
        pcaF 2950100 .. 2950115 - -10.4   -5.1925   CCAGAACGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTGCCATGCCGG 100 54
        clpS 2948617 .. 2948635 -    -8  -4.19704   CAAGGCCAGGCAAAA             CGACGCGG CGA CCGCGCCC             GATGCGGATCAGGTC  74 34
CXD91_RS14245 NONE
        pbpC NONE
        clpA 2938813 .. 2938826 -  -4.5  -2.94747   GCAGGCGATCAGAGA               GCGTG GATC CACAC                GGTCAGTCGATCAGT  45 28
CXD91_RS14230 NONE
CXD91_RS14225 NONE
CXD91_RS14220 2935117 .. 2935145 -  -5.3  -3.16564   CGCGTACGGTATTAA        GGTTAACCCGTAT ACG AAAAAGGTTAACC        TTCTGTTTTCGCGTC  49 20
CXD91_RS14215 2930885 .. 2930895 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 292
CXD91_RS14210 NONE
CXD91_RS14205 2928669 .. 2928701 -   -17  -2.71712   GCGGCTGCGGCAAAT     GGCGGCGCAGCGCCC CGGG GAGC-CCGCGCCGCC      GGCACAGGCCGATCA  80 38
CXD91_RS14200 NONE
CXD91_RS14195 NONE
CXD91_RS14190 NONE
CXD91_RS14185 2924998 .. 2925027 -  -3.3   -3.9461   GTTCCGCAAGAAGAA       CCGGCGCCCGTGC GTGC GGACTGGCTCAGG        CCTCGACTTCGCCCA  58 21
CXD91_RS14175 2922929 .. 2922944 - -11.8  -5.86061   CCCCACCAAAAAAAA              CCGCCC CGAG GGGCGG               CTTGAAAATCGAACG 100 58
CXD91_RS14155 2916914 .. 2916926 -  -6.2  -4.15565   CCGACGATGGCAAAA                GCGG GCAGG CCGC                TGCCCAGATGGGTCT  66 211
CXD91_RS14145 2914004 .. 2914037 -  -5.8  -2.64616   GCGCCAGCCAGATGA     GCGGCGACGTGCTG GTGGTG CAGATCGCCGGCGC      GGCGCTGGCCATCGT  45 443
        cyoB NONE
        cyoC NONE
        cyoD NONE
CXD91_RS14115 2908017 .. 2908049 - -14.1  -3.53012   GCGCCCGGGCGCAAA     CGCG-GGCGGCGCG CTCAGC CGCGCCGTCGCGCG      CGCAGCTCGTGGCGC  78 7
CXD91_RS14110 2907240 .. 2907273 -  -5.1   -4.1899   GGATCGGATTGAAAA     GGGCGGC-CGCGCTCA GAC CGAGCGCGTGATGCCG     CCGTCGATGCGGATG  69 4
        hutG 2906226 .. 2906260 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS14085 2901466 .. 2901487 -  -7.9  -3.78419   GGAGGAAAGATACAA           GGCACCCCG TCAT CAGGACGCC            TGGTGCCTGCCCGCG  66 16
CXD91_RS14080 2900104 .. 2900122 - -13.8  -3.21099   TGTCCCCATGACGAA             CGGCCGCC GCG AGCGGCCG             TTTGCTTGTCTGGCG  73 173
CXD91_RS14065 2897609 .. 2897630 -  -2.8  -2.64616   CCGCCAGGTACAGCA           GGCCCTGG TTCATG CCTGGCCC            GCCGCGCAGGGCAGG  39 13
CXD91_RS14060 2896706 .. 2896735 - -23.7  -3.53224   GACTGCCGCGGCAAA       GGGAGCCTGTCCC CGCT GGGACAGGCTCCC        GGGTATGTAGTTACC 100 36
CXD91_RS14045 2893664 .. 2893681 -  -2.5  -2.57344   TACGCGGCGCACAAT             CCCGGGC TGAA GGCCGGC              GCGGCCTGGTACGGT  38 356
        moaC NONE
CXD91_RS14025 NONE
CXD91_RS14020 NONE
        moaB NONE
CXD91_RS14010 2886428 .. 2886455 - -21.4  -2.70932   TCGGGGGGTGAACGA        GGTGCCTGTCCC CGTG GGGACAGGCACC         TGCGGTGTCCCTCGG 100 138
CXD91_RS13995 2883034 .. 2883044 -  -5.4  -4.09243   CATAGGCGCGGAAAA                 TCTC GAC GAGA                 AGAAAACATATTCTC  64 105
CXD91_RS13990 2882391 .. 2882408 -  -9.8  -4.65895   CGCTCCATGTAAAAA             CCCGGC CTGCGC GCCGGG              TTTTTACATGCCGCG  93 54
CXD91_RS13980 NONE
CXD91_RS13975 NONE
CXD91_RS13970 2877136 .. 2877165 -  -7.7  -3.28712   CGCGCTGGCGCACAA       GGCCGCCGC-GCGC GGC GCGCTGGTGCAGCC       GGCCGCCTACACGCT  55 297
         ggt NONE
CXD91_RS13935 2869671 .. 2869729 - -21.6  -4.65895   GTCGCCACCGAAAAA CGGGCGCGGCGGCGCCCGCGC-GCCGCG CCGAT CGCGGCAGC-CGGCCGCCGCTGCGGCGG CCCGCCGCCCCCACC 100 45
CXD91_RS13930 2868344 .. 2868391 - -11.9  -2.62184   TGGCGCGCGAGATGA CGCTG-TCGGTCCAGCCGCCGA AATAG CCGGCGGCCAGTCCGAACGGCA CCCCCACCGCCAGGG  61 344
CXD91_RS13905 NONE
CXD91_RS13900 2863650 .. 2863665 -  -2.4  -4.10657   CGATATCCTCGAAAA              GCTGGG TATC CCCGAC               AAGGCCCTGGTGCTG  61 414
CXD91_RS13890 2861980 .. 2862015 -   -11  -3.97636   ACTGGAATGGAGAAA    CCGGCGGCGCCGTCAGG CCG CCTTGCGGCGC-GCCTG    CTTGTCGGCGTGGGC  79 2
CXD91_RS13885 NONE
        paaI NONE
        paaJ 2859962 .. 2859980 -  -5.9  -3.37796   CTTCACCAGCGAGAA             CACCGGC GTGAT GCCGCTG             CCCACCGCGAACGCC  55 405
CXD91_RS13860 NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF 2853800 .. 2853831 - -18.8  -3.55444   CGTCTACCCCTGAAA      CGGCAACGCCGGCCA TGG CGGCCGGCGTTGC-G      CCCTGCGAACCCGCC  95 45
CXD91_RS13830 2851725 .. 2851759 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS13800 2843328 .. 2843349 - -14.5  -5.55769   CGGGACAATAAAAAA           CGGCCTTTC TCGC GAAAGGCCG            TTCGTAGGGAGCGCA 100 50
CXD91_RS13795 2835272 .. 2835306 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS13765 NONE
CXD91_RS13760 2829666 .. 2829689 -    -8  -3.27475   TCCCCGACCACAACA          GCCAGTGCCG CAAC CTGCACGGGC           ACCGGTACGTGCTGG  55 406
CXD91_RS13745 2828401 .. 2828438 -  -6.8  -3.53012   GCGCCGGCGGGCAAA   CAGCCCGGCGCGCGCT TCAGTC ATCGCGCACCCTGCCG    CGCAGGCGCTTGGTT  58 4
CXD91_RS13740 NONE
CXD91_RS13735 2826939 .. 2826950 -  -7.2  -3.72576   TGCTGCTGCAGGAAA                CGCG CGAG CGCG                 GCTACGCGGTGTGCG  64 326
CXD91_RS13725 NONE
CXD91_RS13720 2823806 .. 2823847 - -15.7  -2.52234   ACAAACGTCATGAAC GCGCATGGATGGCGGCGGC GCTG GCCGCCGGCAGCATTGCGC  TGGGCGGCGCCGTGC  69 493
CXD91_RS13700 NONE
CXD91_RS13695 NONE
CXD91_RS13690 2818134 .. 2818187 -  -5.2  -3.86897   GGCACGCGGCATAAA GGC-CGGCGTGGGCCTGGCGCAGCAT GGCG ATGG-ACGACAGGGCCACAGCGCGCC CGTGACCAGAACGGC  60 390
CXD91_RS13685 2817611 .. 2817662 -  -2.2  -4.59773   GGTGACGCTGAAAAA GCTGGACGGCTACGC-GCCGGTCCT GGTCG AGG-CCGCCCGCG-AGCTGTCGCGC CGTATTGGCGGCTGA  70 48
CXD91_RS13665 2812004 .. 2812020 - -10.8  -3.13403   CGGTGCCCACGAAGA              CGCGCC GGTCG GGCGCG              ATGATGTCCTGCACC  64 138
CXD91_RS13655 NONE
CXD91_RS13650 NONE
CXD91_RS13645 2807767 .. 2807786 -  -3.4   -3.5764   AACGCCAGTGGGAAA            CCCGCGCA GTGA TGTCCGGG             CTGTTCCACGACACG  51 510
CXD91_RS13625 2804226 .. 2804240 -  -2.7  -3.14881   GAATCGGGTCACGAA               GCTCC GGTCG GGCGC               GCGCCGCGCCTGTCG  44 4
CXD91_RS13620 NONE
CXD91_RS13615 2800395 .. 2800429 - -16.5  -2.53995   ATCCAGCTGAACTGA    CTGGTGTGCCTGTCCC CGCG GGGACAGGCAC-CCCG     TCATACGGGGGGCAG  77 61
CXD91_RS13600 2798746 .. 2798765 -  -4.8  -4.57073   CATCTGGTGGAAAAA            GGCCGCGC CCAT GCGCGCGC             GCAGCAACTCTACGC  72 359
        guaB 2792988 .. 2793025 - -22.2  -4.86731   CGGTTGGAAATAAAA   GCGCACCGGCCAGAACC TGGCC GGTTCTG-CCGGTGCGC   GATGCATTGCGTGAT 100 58
CXD91_RS13575 NONE
CXD91_RS13570 2791074 .. 2791090 -  -3.7  -4.12902   CAACTATTTGTAAAA              TATCTGA AAT TCAGCTA              TCAATCCACCGACTT  61 39
CXD91_RS13565 2790765 .. 2790775 -  -6.8  -3.16564   GCCCCATGTCACCAA                 TCCG CGT CGGA                 AGACCCTGCGGGACT  52 8
CXD91_RS13560 2789159 .. 2789209 -  -5.2  -3.75332   ATTCGCCAAGCCAAA GCCCAGGGCCAGCTCGCCGCCG ACACCAA CGAAGCCAGACTGGCCATGGAC CTGCTCGCCTACCAG  58 232
CXD91_RS13550 2786877 .. 2786899 -   -12  -3.58522   ATGACGATGCCGAAA           CTGGCCGG CGACAGC CCGGCCAG           CAAGCCCGGATTTGC  72 314
CXD91_RS13540 NONE
CXD91_RS13535 NONE
CXD91_RS13530 NONE
CXD91_RS13525 NONE
CXD91_RS13520 NONE
CXD91_RS13515 NONE
CXD91_RS13510 2778515 .. 2778536 -  -2.8  -2.74999   CAACCCGCAACAGGA           TCCGCGTC ATCCCG GGCGCGGC            GGCCGCCGACTGGCC  40 252
CXD91_RS13500 2776635 .. 2776648 -  -3.8  -3.64703   TCGCGGCCAGCGAAA               CAGC CGCCCT GCTG                GCCTCGCTGGCGCCC  54 440
CXD91_RS13485 2773128 .. 2773150 - -10.4  -2.81464   CGACCAGCCATGATA           CTGCGCGGCC CCT GCCCGCGCCG           CCGTCCTATTGCGTT  59 119
CXD91_RS13480 NONE
CXD91_RS13475 2771951 .. 2771989 -  -8.6  -2.70932   GGTTGCCGGCAAGCA   GGTGGCGCACGGACTGGC CGC GCGAGGCCTTGCGCCCGC   CTTGCGGCGGCCTAG  52 37
CXD91_RS13470 2770697 .. 2770711 -  -3.4  -3.35073   ATCATGGGCAAGGAA               GACGTG CTG CGCGCC               TCCAGGTCCGTCCCC  47 204
CXD91_RS13460 2768527 .. 2768573 - -14.5  -3.36273   CGGCCTGAAGATCAA CAACTCCGCGGCCGT-GCT-GCA AGC CGCCATCGACGGCCGCGGCGTTG CGCTGGCGCGCAGCG  79 298
CXD91_RS13450 2766985 .. 2767013 -  -2.4  -2.57931   GCCACCGCCGACAAT       GGCCACGCGCACGC TCA GCATGC-C-TGCCC       CTGGTCCACGGCCTG  38 11
CXD91_RS13445 NONE
CXD91_RS13440 2764788 .. 2764805 -  -5.5  -2.63596   GGTGATTGGACAGGA             CCGCG-GC CAG ACGCGCGG             ACTCAGTCTTGGTCG  44 28
CXD91_RS13435 2763126 .. 2763140 -  -9.2  -3.44146   CGCCGCGACAACGAA               CGCCGC CGC ACGGCG               CTGCTCGAGGCCATC  61 408
CXD91_RS13425 NONE
CXD91_RS13420 NONE
CXD91_RS13415 2759690 .. 2759702 -  -6.2  -3.31726   GGCCGTTATAGAACA                GCCG CGGAC CGGC                GCGCCCCCCCCCCCC  53 427
CXD91_RS13410 NONE
CXD91_RS13405 2757105 .. 2757126 -  -2.9  -2.94099   TCGCCTGACGAGATA           GGCCCACATG GTT CA-GCGCGCC           CCGCCGGTTTTCTCG  41 16
CXD91_RS13400 NONE
CXD91_RS13395 NONE
CXD91_RS13390 2753678 .. 2753698 -    -6  -3.53012   GCCGCCCCCCGCAAA            GGCCGCTG TCAGG CCACGGCC            GCCTCCCGCGCGCGG  56 13
CXD91_RS13385 2752468 .. 2752481 -  -3.7  -3.16647   TCCAGGCATGAAAAT               GCCAG GAAT CGGGC                CGGCTGCCCAGGGCA  45 85
CXD91_RS13380 NONE
CXD91_RS13375 2751490 .. 2751526 - -18.8  -2.70932   GGCCGGCGTCAACGA   GCGCGGCGCCGCGCTCGC CCC GCAAGCGCG-CGCC-CGC   CAGGCCATAGGCGGC  87 44
CXD91_RS13365 2749692 .. 2749706 -  -3.4  -3.57144   GGTTCCAGGCCGAAA               CCAGCG TGA CGGCGG               CGCTGCGCGAGCGCG  51 498
CXD91_RS13355 2748106 .. 2748116 -  -2.4  -2.80816   CCTGCAGGTAGCACA                 CCGG CGC CAGG                 GTCGAGGTGTTCTCG  40 310
CXD91_RS13345 2747791 .. 2747806 -  -3.2  -4.00066   TGGACAACTGACAAA              CGCTTT AACA ATAGCG               CGCCGATTGCGTCGC  58 98
CXD91_RS13340 2746595 .. 2746629 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 439
CXD91_RS13330 2744960 .. 2744997 -  -3.9  -3.56594   TGAAATTCGCCCAAA   GCCGGCC-CAACCCGCCG CTG CCCCAGGCCGCGGCCGCC   GACTATATGGGCACC  51 491
CXD91_RS13320 2742614 .. 2742627 -  -8.1  -3.28712   GGGCCTGGGCCACAA               GCACG GCAT CGTGC                TGGGCAACCTGGTCG  55 237
CXD91_RS13310 NONE
CXD91_RS13305 2740706 .. 2740724 -  -2.4   -2.8655   GCGAGGCATAGTAGA             TCTCCCTT ATC AAGCGAAA             GGCATCATCGCTTTC  40 16
CXD91_RS13300 2740285 .. 2740315 - -16.2  -4.09685   TTTGAGCCTTCAAAA       CGCAAACGGGGCCA TTA CAGCCCCGTTTGCA       GCGATCCGCGATGTA  95 50
CXD91_RS13295 NONE
CXD91_RS13290 NONE
CXD91_RS13285 2736461 .. 2736474 -  -2.3  -3.88137   ACAATTGCCGACAAA               GCGTA TCAC TCCGC                AGAGGCGGGGTCCGG  54 17
CXD91_RS13280 2735932 .. 2735961 - -15.8  -4.41047   AGCGCCCAAGGAAAA       CGCCGCC-GGTTC GCGAA GAACCAGGCGGCG       TCGCGGCCTGCCGTA 100 61
CXD91_RS13275 2735706 .. 2735740 -   -26  -3.45027   AGTCCCCACGAAAGA     CAAGGCCGTCAGTGAT GTG ATCACTGACGGCCTTG     GAACTACTGGTCGGG 100 33
CXD91_RS13265 2733591 .. 2733624 - -15.9  -3.14564   GCACGGGCCGAGGAA     GCGTGCCGGACTGCC CACG GGCAGCCCGGCGCGG      ACTACAGCTCCAGTT  78 27
CXD91_RS13255 2732022 .. 2732045 -  -8.8  -2.58892   AGGCAGATCAATTGA          GCGCCGCC TCGCGCAT GGCGGCAC           AGCCCCGCCCCGGCA  52 263
CXD91_RS13250 2731662 .. 2731685 - -14.6   -5.0925   TGCGAAAACGAAAAA          GGCCTGGCGA TGAA TCGCCAAGCC           TTTTTGATCTGGTTG 100 35
CXD91_RS13245 2730833 .. 2730878 - -12.7  -3.05844   TCGTGGACTTCAAGA CCCGCCGCATACAGCCGCGCA AGTACG TGCGCGGCCGTAT-CG-CGCG CATCCAGTTCTACAT  66 360
CXD91_RS13235 2729960 .. 2729990 - -10.4  -4.86621   ACGCCCAATGAAAAA      GCCGCCTTGGCGC CCTATC GCGGCA-GGCGGC       TGCGCACGGTGCGGC 100 59
CXD91_RS13230 NONE
CXD91_RS13225 2728969 .. 2728985 -  -7.3  -3.20348   GGGAGGAATACGGAA              TATACGC AAT GCGCATA              TTATTCGACCCCAAA  52 89
CXD91_RS13220 2727598 .. 2727656 -  -7.9  -4.07568   GCTGGGCGGGGAAAA GCGCGTCTGACGCGGGCTCGCGTGGCGC TGGC GCGCCACGCGATACGGC-TCAGTCCAGG CCGTGGAAGACGGAA  69 16
CXD91_RS13210 2725963 .. 2725983 -  -6.8  -3.40403   GCCCTTTCACTACAA           CCGCGCGCC GGTG GGCG-GCGA            AACCAGCCCGCCCGC  55 180
CXD91_RS13195 NONE
CXD91_RS13190 NONE
CXD91_RS13185 NONE
CXD91_RS13180 NONE
CXD91_RS13175 2719834 .. 2719844 -  -3.2  -3.05384   CCCCTGCGGACTCAA                 CCGA CCG TCGA                 GCGCCACAGGGCAAT  42 11
CXD91_RS13170 NONE
CXD91_RS13165 NONE
CXD91_RS13160 2716035 .. 2716049 -    -7  -5.15969   CCCCAAGGCAAAAAA               GCCTCC TCG GGGGGC               AGCAAGCCCGCATAG  93 161
        recA NONE
        recX 2709944 .. 2709990 -  -9.3  -3.33815   ACGGGCCGCAAGCAA GCCCCAGGCAGGCGG--GCCCGC ATC GCGCGCCGCCGCCCGCACGAAGC GGCATCGTTCAGTCG  61 34
CXD91_RS13125 2706391 .. 2706411 -  -6.7  -3.40403   TCCTGGGGAGTATAA            CGCAGCCGA TTG CCGGCGACG            CGGCCCGGGCCGACC  56 153
CXD91_RS13120 NONE
CXD91_RS13115 NONE
        sucD 2703609 .. 2703628 - -16.4  -5.78622   GCATGCGAAAAAAAA            CGGCCCGC GATC GCGGGCCG             TCCTGGGACAGGCGG 100 57
CXD91_RS13105 2702625 .. 2702667 - -23.5  -5.07652   GCGGCCAAAAGAAAA CGGGCTGGTCAG-CCCCGCC TGAA GGCGGGGCCCGAACAGCCCG CTATTGTAGTTCAGC 100 47
CXD91_RS13100 2701711 .. 2701744 -  -5.9  -4.03413   AGGGCGTCAGAGAAA     GCTGGAGACGATGAC CGAA GCCACCACCCCCAGG      ATGGCCAGCACGAAC  66 92
CXD91_RS13095 NONE
CXD91_RS13090 NONE
CXD91_RS13085 NONE
CXD91_RS13080 2697106 .. 2697123 -  -2.6  -4.23781   TTGATGAAAATGAAA             TCAGGC TTTGTC GCCGGA              CGCCGGGCCGGCGGA  62 8
CXD91_RS13075 2696472 .. 2696513 - -23.8   -4.2231   AAGCATGACGCAAAA CGGCGCGGATGCGAGCGGC TGCCT GCCG-TCGCTTCCGCGCCG CCGGCCGCCCCAGGC 100 53
CXD91_RS13070 NONE
CXD91_RS13065 2695449 .. 2695468 - -12.8  -5.07652   CGCGGCAAAAGAAAA            GCCCCCGG ATGA CCGAGGGC             TTGCATCATGCCGGC 100 50
CXD91_RS13060 NONE
CXD91_RS13055 2693525 .. 2693563 -   -11  -3.01712   CCTGCCGCGCCAAGA  TGGCGGTGCGCGG-GGCA GACGG CGCCGCCGCGG-CCGCCA  TGAACGCCGCGACCC  62 185
CXD91_RS13045 NONE
        cpaB NONE
CXD91_RS13035 NONE
CXD91_RS13030 2687774 .. 2687787 -  -8.1  -3.53012   GCCCGGCTCCTCAAA               CGTCG ATGG CGACG                ATGCGGCGGATCAGC  60 7
CXD91_RS13020 NONE
CXD91_RS13015 NONE
        folD 2684383 .. 2684397 -  -3.4  -3.75933   ATAGACGCGAGCAAA               TCCGCC GGC GGCGAT               TTCTCCGATCGCACG  55 187
CXD91_RS12990 NONE
CXD91_RS12985 NONE
CXD91_RS12980 2676646 .. 2676656 -  -6.8  -3.07816   GTGCGAGTTATCCAA                 GGAG ACG CTCC                 CGTTCGATATCGACG  51 7
CXD91_RS12975 NONE
        purU NONE
CXD91_RS12965 NONE
CXD91_RS12960 NONE
CXD91_RS12955 2671853 .. 2671874 - -14.5   -5.1287   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTTTTGCAT 100 53
CXD91_RS12945 2670455 .. 2670477 -  -9.8  -3.40403   GGCGCGCCAGGACAA           CGGCCTGTAC GAC ATGCAGGCCG           TACTGGGCCTGTAAG  65 76
CXD91_RS12930 2668519 .. 2668540 - -15.9  -6.10489   AACCGCAAAAAAAAA           CCTCCAGGC TTGC GCCTGGAGG            CAGGGTTGGTAGAGC 100 48
        hrcA 2664739 .. 2664756 -  -5.5  -3.54382   GCGAAGAAACACGAA             GACACCT CTCA AGGCGCC              GCCCCGCGCGCAGGC  54 62
CXD91_RS12910 2663605 .. 2663622 -  -8.3  -2.52676   CATTCGCGGAATGGA             CCGGCGC GCTC GCGCCCG              CCGCTTCAACCACAG  51 50
CXD91_RS12905 2663269 .. 2663294 -  -3.8  -5.52384   TTTCCAGGAAAAAAA         GCCCGGCTCC CATGAC GCCGCCGGAC          GGCGCGTCGCCGCCC  90 54
        grpE 2662605 .. 2662649 -  -5.6  -3.05384   CTCGGCGGGATCGAA TGG-G-GCGGCGGCCATGCCTG CTT CAGCCCTGGCCGGCGGACACCA CGACCAGCGCCGGAC  47 3
CXD91_RS12895 2662191 .. 2662209 -    -3  -2.78725   ATACGGTAGGAATCA             GGGTTTGA AAC TCAGTCCC             CCAGTAACTGGAGTT  40 55
        dnaK 2660164 .. 2660206 - -18.5  -3.27298   GTTCTGAATCATCAA CGCG-CGCGCCCGGTAGCTG GAAT CAGCTACCGGGCGTATCGCA CGTCATCGTTCGGCC  93 42
        dnaJ 2658892 .. 2658921 - -22.3  -2.88249   GACATCCGCGACAGA       GTGTGCCTGTCCC CGCT GGGACAGGCACAC        TGCTCTACGCCATGA 100 93
CXD91_RS12875 NONE
CXD91_RS12870 2654590 .. 2654621 -  -7.9  -3.85864   CGAGCACTACAACAA      GGAGGCCGGCGCGG TCTGG CTGCGCCGGC-TGC      TCGACGCCTGGCCCA  67 187
CXD91_RS12850 NONE
CXD91_RS12845 2650723 .. 2650751 - -16.7  -4.38712   CCGAGCGCTAGAAAA        GGAAAAGCCCCCG GAT CGGGGGCTTGCCC        GGCGCCGCTTACTGG 100 34
CXD91_RS12835 2648775 .. 2648799 - -11.4  -5.02074   CCATTCGGCAAAAAA         CCCGCTACCCC CATA GGGGC-GCGGG          TTTCTCGGCTGATGC 100 60
CXD91_RS12830 2647580 .. 2647597 -  -3.3  -2.74864   TGTAGAAGCAAATAC             CGGACCG GCCT CAACCCG              AAACGGAATCCCACA  40 83
CXD91_RS12825 2646219 .. 2646229 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS12820 2644825 .. 2644847 -  -7.6  -3.17212   CGACTACCTGACCAA           GCCGTTCGGC GTC GGCGAACTGC           TGGCGCGCCTGCGCG  53 393
CXD91_RS12785 NONE
CXD91_RS12780 2633784 .. 2633818 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS12755 NONE
        lolA 2627857 .. 2627877 -  -3.3  -3.05596   CACGGGCGGATCCAA           CG-CGCAT TACACC ATGCGGCG            GCCTTGGCCCGCAGG  42 74
CXD91_RS12745 NONE
CXD91_RS12740 2625036 .. 2625053 - -11.3  -4.98531   CGCCGAAATGAAAAA             CGGAACC CGCG GGTTCCG              TTTCTGGTTCACGTG 100 54
CXD91_RS12735 2624396 .. 2624413 - -14.1  -4.95957   CAAATCAATGAAAAA             GCCGCCC GGAT GGGCGGC              CTTTTTTTGCGGCAC 100 167
CXD91_RS12720 2622992 .. 2623005 -  -9.5  -3.28791   ACGGCTGGCGCATAA               CGGCC CGCG GGCCG                GTCAGCCTTCCTGGC  61 27
CXD91_RS12710 2621343 .. 2621364 -  -7.3  -2.78463   AGGCGCTGCAGCAGA           TCACGC-CCA GCA TGGCGCGCGA           GATGGTGTTCTTCCC  49 352
CXD91_RS12655 2608181 .. 2608229 -  -6.6  -2.70932   CGCCGCCGGCAATGA TGGCACGGATCCGTGACCGGGC GCGGTCA GCCCGGGC-CGGA-CCGCTCCT CGTTGTCCGCGGCGG  47 3
CXD91_RS12650 2607291 .. 2607301 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS12645 NONE
        yaaA 2605449 .. 2605486 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
CXD91_RS12635 2603756 .. 2603770 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  61 489
CXD91_RS12625 NONE
CXD91_RS12620 2600178 .. 2600212 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        thrS NONE
CXD91_RS12590 2594888 .. 2594924 - -19.3  -3.05463   ACGGGCCGCACGCAA    GCCGGCCCGGACGCCCC TCG AGGGCAACCGGGCCGGG    GATGGGATCAGCCTG 100 33
CXD91_RS12585 2593819 .. 2593832 -  -3.1  -2.87243   GCACGACGATAACGA               TGCCA GTCA TAGCA                GCAAGTTCAGCCGGC  41 32
CXD91_RS12580 NONE
CXD91_RS12575 2593002 .. 2593028 - -10.8  -2.62735   AGAGCGCGTAGACGA         TGCAGCCCGC GCCGACG GCGGGCTGCC         GGAACCTGAGGTTTT  59 42
        ptsP 2591190 .. 2591207 - -10.5  -5.64006   ATGCAACGAAAAAAA             CGGCGCC GCAA GGCACCG              TTTTGCCGTGCCACC 100 47
CXD91_RS12555 NONE
CXD91_RS12550 2588024 .. 2588042 -   -16  -5.31275   TTTGACGACAAAAAA             GGCAGGCC CAA GGCCTGCC             CGCATTGCCGCGCCC 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
CXD91_RS12530 2584874 .. 2584884 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS12525 2583590 .. 2583630 -  -5.9  -3.29144   CTACGTCGCCCACAA  GGCGCCGTGGCACGACATC ACG GATGACCTCCCGCGGCATC  CCGAGGGCCGCCCCG  53 265
CXD91_RS12490 2577681 .. 2577696 -  -7.5  -2.71011   ATCCCTTCGCAATCA              GCGCG GGACGG CGCGC               CGGTCCCTGTTCCGC  51 7
CXD91_RS12485 2576411 .. 2576430 -   -15  -5.15634   GAGGCCATGAAAAAA            CCGGACGC TCGC GCGTCCGG             TTTTCCATGCGGGCG 100 72
CXD91_RS12475 2574793 .. 2574819 - -17.3  -5.26875   CCTCCAATGAAAAAA        GCCCGCGCGCCC CGAA GGGCG-GCGGGC         CTGGACGGCGCCGGC 100 46
CXD91_RS12470 NONE
CXD91_RS12465 NONE
CXD91_RS12460 2573866 .. 2573884 -  -4.4  -2.77523   TGCGCAGGAAGATCA             TGGCGGAC TCA GAGCGCCA             GCGGCAAGGGCACGG  43 15
CXD91_RS12455 2573266 .. 2573283 -  -9.1  -3.41836   ATAGGGATGGAAAGA             CGGCCCGC CAG GCG-GCCG             CGAATCGGCTATTTT  63 129
        purE NONE
CXD91_RS12445 2571526 .. 2571540 -  -3.4  -2.60075   GCGGCGGGAATCAAT               GCGTCA GAG CGGCGC               GGCCATGCCCAGCGC  39 14
CXD91_RS12440 2570425 .. 2570441 -  -7.2  -2.62184   GTCCGCGTGAGATTA              CGCCCG GCCGG CAGGCG              CGGCAATCAGGAGTT  47 56
CXD91_RS12435 2569264 .. 2569301 - -10.5  -3.06162   TAGCGTACCGCAATA   CGGGACAGGC-GTATCGC TTG GCGATCTTGCCCGCCCCG   CCGCCCTCGCCCTAG  60 37
CXD91_RS12430 2568342 .. 2568360 -  -5.9  -3.62518   CGAAAGATCCGGAAA             GCTAGGG TATTC CCCTTGC             TCTCCCATCAAATAC  59 50
CXD91_RS12425 NONE
CXD91_RS12420 NONE
CXD91_RS12415 NONE
CXD91_RS12410 2564949 .. 2564972 - -19.6  -2.75064   CCGGCCATGGAACCA          CTGCCGCGCG GGCG CGCGCGGCAG           GCCGGGCTCAACCCA  93 33
CXD91_RS12405 2563232 .. 2563262 -    -9  -3.89956   GCAGGATAGACCAAA      CG-CGCCGCCCGCG TGTTG CGCG-GCGGCATCG      CGCCCGGCGTGCCGG  73 55
CXD91_RS12400 2562579 .. 2562618 - -12.1  -3.73072   AAGCCTTCTACTAAA  CCCCGCGTGCCTGTCCCC GCAAG GGGGACTGGCAC-CGGCA  AACTTCCCCGCGTGC  77 122
CXD91_RS12385 NONE
        xerD NONE
        ybaK 2556996 .. 2557018 -  -9.1  -2.94144   TCTCCATGGAAAGGA          GCCGGC-CGC CGTA ACGCGCCGGC           CTGGTCATGCGACGA  56 100
CXD91_RS12370 2556360 .. 2556388 -  -5.2  -2.59564   CCGGCAGGCGACAAG       CGCGC-GC-CGGCC GGC GGCCGTACAGCCCG       TATTGGGGTCAGTGC  44 34
CXD91_RS12365 2555878 .. 2555888 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS12360 2554396 .. 2554414 -    -3  -4.07885   GATGTCCTCGGAAAA             CCGCGC CGCCCAC GCGCTG             GGCCGCAACTATCCG  58 485
CXD91_RS12345 2551690 .. 2551704 -  -9.2  -3.28712   GCGCGCGGCCTAGAA               GCCGCA CAG CGCGGC               GATGTTTTCCCAGTT  61 187
CXD91_RS12340 NONE
CXD91_RS12335 2545031 .. 2545089 - -24.1  -2.71731   TTCACCGCCGAACCA TGCGAAGGGGCCCGCCAGCTACGCATTCT AAC AGAATGCGTAGCTGGCGAGCCCCGGC-C- CGACCGGACCCATCA 100 521
         ffs 2544885 .. 2544920 - -10.7  -2.70932   GGGGCGCCGCAACCA   GGAATG-AT-GCGATCC GCCT GGATCGCGATACATTCC    GGTCACGGCGCCCCT  60 54
CXD91_RS12325 NONE
CXD91_RS12320 2542282 .. 2542316 - -13.5   -2.6927   ATCGCGCAGACAGCA    GCGCGCCCGGCGGCCC GGCT GGGCCGCCAAG-GCGA     TATCAGAACGGCAGC  67 28
        recR 2541615 .. 2541625 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS12310 2540393 .. 2540422 -  -2.7  -4.13767   TGTCGGATGTGAAAA       TGGCCGATGCGCGC AAC GCCCGCCT-GGTCA       TACTCGAGGACGGCG  61 214
CXD91_RS12290 2537340 .. 2537374 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS12250 2529654 .. 2529706 -   -11  -3.28791   ATTTGCCGGGGATAA CATCGGGCGG-TGCCCGGCGGCGCC TTGC GGCCCCGCCGGATGGCCGCGCGGCG CAGCATGCCTGCGCG  66 298
        mutS NONE
CXD91_RS12235 2524756 .. 2524777 - -15.9   -4.4078   TTCGCGCAATGAAAA           TGGCCTCCG TTAC CGGAGGCCA            TTAGCATGCCTGCCC 100 520
CXD91_RS12230 2523952 .. 2523975 - -18.2  -5.40474   AGCGGCGCAAAAAAA          CCGGCAAGCC GCAA GGCTTGCCGG           TTTTTTTTGGCCTGG 100 50
CXD91_RS12210 NONE
        glnH NONE
        glnP NONE
        glnQ 2517476 .. 2517497 -  -8.8  -3.05844   CGGCCGACGCCAATA           TCGTGCAT GTCACG ATGCACGA            CGACGCGGTTTCCAC  55 165
CXD91_RS12165 2511664 .. 2511675 -  -4.4  -3.35679   GGCCGCCAGCGAGAA                CTGA AACC TCAG                 CCGCGTCCCACGAAC  51 22
CXD91_RS12155 2508907 .. 2508917 -  -3.2  -3.89614   GCCAAGGGCGACAAA                 GCCA ATC TGAC                 CAAAGCCGAGCGTAA  58 441
CXD91_RS12130 2506128 .. 2506154 - -12.2  -3.05384   GCCGGCCTCACCGAA         TTCGACGCCGCC CCG GGCGACGCCGAG         GTGGCGGCGCTGCGC  66 492
CXD91_RS12120 2503861 .. 2503877 -  -6.5   -4.8083   CAACAGCACGAAAAA              TGCCAGC GTG GCCGACA              GCGCGGCCGCAAGTT  82 139
        rdgB 2499724 .. 2499734 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS12100 NONE
CXD91_RS12095 2497348 .. 2497370 -  -7.6  -4.16842   CCGACTGGCAATAAA           CAGGCAAGCA AAA TGCGTGCCAG           GTCCCGCACTCCTGG  74 133
        glnA 2495826 .. 2495878 - -22.1  -3.11634   CGTCATAGGAGGCAA CCGGGACG--GCGCGGCGGGCGGGCC GCGA GGCCCGC-CGCCGCACAGCCTCCCGG ATTACAGGCTGTAGT 100 27
CXD91_RS12085 NONE
        ntrC NONE
CXD91_RS12070 2491420 .. 2491442 - -11.9  -4.56597   CGCGCCGTGGAAAAA           TGGGCGCCG GCTGG CGGCGCCCG           TCTCACTTTACGGCA 100 33
CXD91_RS12065 2490244 .. 2490278 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 214
CXD91_RS12040 2484622 .. 2484635 -  -9.5  -5.27335   GCGGCCAAAGAAAAA               CCGCC CGAA GGCGG                CTTTTCCTGGCGGCG 100 48
        dkgB 2481124 .. 2481141 -  -2.6  -3.65351   CCAGCGTCAGCGAAA             CGCCGG TCTTGT CCAGCA              ATACGCCCACCCCTC  51 478
CXD91_RS12015 NONE
        recG NONE
CXD91_RS12005 2475344 .. 2475370 -  -9.4  -3.14132   CGCGTGGTCGAGCAA        GCCCTGGCCGA GCATTT CCGGCC-GGGC         TTCGCCACGCCGGCC  59 58
        mmsA 2472803 .. 2472832 - -18.6  -2.67316   GAACGCAACAAGGCA       GC-CCGGCGCGGC GCCCG GCCGCGCCGGCGC       GCGCTCAGCCCGAAC  87 30
CXD91_RS11990 2472195 .. 2472216 - -15.9   -5.4505   CCCGGCAAGAAAAAA           GCCGGCATC TCTC GATGCCGGC            TTTTCTTCTGCGCGC 100 47
CXD91_RS11965 NONE
CXD91_RS11960 NONE
CXD91_RS11955 NONE
CXD91_RS11950 NONE
CXD91_RS11945 NONE
CXD91_RS11940 NONE
        tviB NONE
        tviC 2456842 .. 2456892 -  -2.7  -3.07816   CCGTCAGGTACGGAA TACGCGCGATGCCTGACGAATGA AGCTCGA TCAT-CG-CAGGAATTGCGTGTA CCAGGGCATGGCGGC  42 5
CXD91_RS11925 2454789 .. 2454807 -  -5.2  -3.13403   CGCCCTGCAGGAACA             GGAACGAG GCG CTCATGCC             ATGCTCCGGCTCATC  49 36
CXD91_RS11920 2453601 .. 2453611 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD91_RS11915 NONE
CXD91_RS11910 NONE
CXD91_RS11905 2450016 .. 2450050 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS11840 NONE
CXD91_RS11835 2436626 .. 2436662 - -11.4  -3.01712   CGCTGGCCGCGAACA    GGCGCGCCAGCGCCGG CGCGT CCAGCGCCCGCACGAC    GGCATCGGGCGCATA  65 427
CXD91_RS11825 NONE
CXD91_RS11820 NONE
CXD91_RS11815 NONE
CXD91_RS11810 NONE
CXD91_RS11805 2429987 .. 2430013 - -22.3  -3.05384   GCGTGCGCGACGCAA         GCGGGCGCGGG GCCCG CCCGCGCCCGC         CCGCGCCTACTTGCC 100 32
CXD91_RS11790 2427252 .. 2427299 -  -5.4  -2.73468   CAATATCCTCAAGCA TGCGCGAGCGCGCCGCCTGAC CGTGAGC ACCCGGCTG-GAGCCCGCGCA CGCGGTCATCGCCGT  43 191
CXD91_RS11775 2421464 .. 2421484 -  -8.2  -3.34895   GCCAGCCTGAAGCAA            GCCGTGGC CATTC GCCAAGGC            AAGATGCCGCCATCG  59 267
CXD91_RS11755 2419320 .. 2419358 - -10.1  -3.65351   GCACCGTCATGGAAA  TCGCGACGGCGGCGGTCC ATGC GGG-CGCCGCCGCCCCGG   CGCTCAGACCGGTTC  67 29
CXD91_RS11725 NONE
CXD91_RS11720 2412613 .. 2412654 -  -3.7  -2.71791   AGTTTTGGTGCAAAT GGCCGCTGCGATGCGCATG GCGTGT CA-GAGCATCACGGCG-CC GCCGTTGATGTCGAG  41 8
CXD91_RS11715 2411221 .. 2411235 - -12.8  -4.15044   GCGCGCCTGAAGAAA               CCGGGC TAC GCCCGG               CTGGCGCAGTGCGAC  86 383
CXD91_RS11705 2409276 .. 2409291 -  -5.4  -3.67597   GCTCCCAGGGAACAA              GGCCCTG CGG CAGG-CC              GGCCGGCACCGACTG  57 286
CXD91_RS11695 2407522 .. 2407556 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS11655 NONE
CXD91_RS11650 2399981 .. 2399993 -  -4.8  -3.01712   CGCGGGGGTGGAAGA                CTGG GCGCG CCAG                CACGATATCGTACTG  46 363
CXD91_RS11640 2398961 .. 2398971 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS11635 2397429 .. 2397484 - -11.7  -4.07568   GGTCGTGGTGGAAAA CCGCGGCGGCGGCGG-CGGCGCGATCG GCGC CGA-CGCGCTGGCCAAGGCCACCCCGG ACGGCTATACGCTGG  82 498
CXD91_RS11625 2393859 .. 2393872 -  -2.3  -3.01918   CCAGGGCATAAACGA               CTTCC ATCA GGCAG                GACTCCCGGTTTGCG  41 18
CXD91_RS11620 NONE
CXD91_RS11615 NONE
CXD91_RS11610 NONE
CXD91_RS11605 NONE
CXD91_RS11600 2390714 .. 2390724 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 117
CXD91_RS11595 2389652 .. 2389677 -  -8.2  -2.70932   TCGCTCCTTGAAGTA         GGCGGC-GGCC GTCAT GGCCTGCCGCT         GACCTTTCTACCATA  52 58
CXD91_RS11590 2389044 .. 2389059 -  -4.6  -2.84454   ATAAAGGACTTAAAG              GGTCGG ACAG CCGACA               TTTTGCCTGAATGCG  44 90
CXD91_RS11585 NONE
        tadA NONE
CXD91_RS11575 2386633 .. 2386679 -    -7  -4.56597   TCTTTCCTGGAAAAA CGCCAGCCCGCCTGGGTGCCCC GGC AGGACACGTAGCGGGGCCTGCG TTCAGTGGGTGTGCT  77 27
CXD91_RS11550 2380024 .. 2380067 - -12.2  -3.28924   TACCTGTCGTTATAA GCATGCCGCGGGCGGCGCGGC CAG GCCGCGC-GCGGGCGCCCCGC TTACGCCTCGATGCC  71 26
CXD91_RS11545 2379081 .. 2379104 - -17.4  -2.61695   GGGATCGGCAAATAG          GCCGCGGGCC GGCG GGCCCGCGAC           ACGGTATCGGTATGA  80 57
CXD91_RS11540 NONE
CXD91_RS11535 2377256 .. 2377278 - -11.9  -3.15544   GGTCATGGCGATGAA           GGCGCGGGC GCCAG GCCCGCGCG           TGGTTCAGACGTATT  66 30
CXD91_RS11525 2374881 .. 2374909 -  -2.9  -3.59738   CACGATACGCTCAAA        GCCCGCCTGTCCG ACT CGGTCAAGGACGC        CATGCGCGCCAAGGC  50 464
CXD91_RS11515 NONE
CXD91_RS11510 2372975 .. 2373012 - -11.4  -2.67021   GCGCCAAATAGCAAT  CCGGACAGCGGCCATAACC TAA GGTT--GGCCGCCG-CCGG  CGCGGCCGGACCTAC  61 37
CXD91_RS11505 2371383 .. 2371393 -  -8.2  -3.06796   CCCGAGCTGATCGAA                 CGGC AGC GCCG                 CGAACTGCTGGATGC  55 248
        mltG NONE
CXD91_RS11480 2364963 .. 2364982 -  -2.8  -3.16564   CTGCCAGGGCAGGAA            GCGAC-CGA GGC TCATGCCGC            TTGCGCCACCAGCTC  44 17
        holB 2363907 .. 2363920 -  -9.5  -4.03078   GGATCACAGGAGAAA               CGGGC CGTG GCCCG                ATCGTCACTGGCAGG  75 30
CXD91_RS11470 NONE
CXD91_RS11465 2362130 .. 2362149 -   -15  -5.52384   CCCCGAGCAAAAAAA            TGCCGCCC CGGT GGGCGGCA             CGTGATCAGGTGGAG 100 94
CXD91_RS11460 2361251 .. 2361268 -  -5.6  -4.67982   TTGGAGTGAAGAAAA             CCGTAT GGATGG ATACGG              CCACAGGGATACATC  77 39
CXD91_RS11455 2360285 .. 2360300 -  -2.5  -3.90744   CGTGCCGCGAAAGAA              CAGCA GGTATA CGCTG               CACAGGTTGTAGATG  56 189
CXD91_RS11445 2358898 .. 2358954 -  -7.3  -3.65902   GGCATCGCAGGCAAA GCCCAGCACCGCGGCGTCGCCGGCGCCGG CGT CCTGCCCCAGCG-CG--ACGATG-TGGGC CAGGCGGCGCGTATC  61 100
CXD91_RS11435 2356531 .. 2356559 - -19.6  -3.04398   GCCTGCGCTGAAAAC       GGC-GCCGGCCCC TTGC GGGGCCGGCTGCC        TGGTACGCCGATGCG 100 68
CXD91_RS11355 NONE
CXD91_RS11350 2340902 .. 2340918 -  -2.9  -3.71645   AACGTCATATTGAAA              TGGACCG ATG CCATCCA              AGCCATAGGATACAA  53 98
CXD91_RS11345 2339810 .. 2339834 -  -6.3  -5.24129   GCGCTGGAGAAAAAA          GCGCAAGGCCA GGC TGGCCCCTCAC          CCGAAATCGACGGCC  93 173
CXD91_RS11330 2324340 .. 2324363 -    -3  -3.40403   GCCGGCGCATGAGAA          CCCTGCGAAT CCCC ATGCGCCGAG           CCGGCGGCAGGCCGC  48 47
CXD91_RS11325 2323802 .. 2323812 -  -3.2  -4.45261   GAAAGAAATGGAAAA                 CAAG AAT CTCG                 TGACAAGCCGACCAT  69 85
CXD91_RS11320 NONE
CXD91_RS11315 2320175 .. 2320206 -    -3   -3.9941   CCCCGCAGAAGGAAA     TTACGCGCGCGGGC ACGGCG GCCCG-GCG-GTCA      GCGAATATCTGGCTC  58 23
CXD91_RS11310 NONE
CXD91_RS11305 2317310 .. 2317325 -  -4.6  -2.78384   GGCTGCCGCAGCACA              TGACGC TGTA GCGTCG               CGGCCGCGTTCTCGC  43 46
CXD91_RS11260 2309068 .. 2309096 - -14.6   -3.6106   CGTAACAGGGGGAAA       GGC-CGCGCCCCGC CCA GCGGG-CGCGCGCC       GATGCATGATGGATT  81 40
CXD91_RS11255 2305314 .. 2305371 - -16.2  -2.71712   CGCCTTGTTCGAAAT GCGCGATGGCGGGCTGACCCTGCAGGT GCATG ACCGGCGCGACCAGCCCGCCTT-GCGC GTGACGGTGTGCCCG  77 63
CXD91_RS11240 2302153 .. 2302199 -  -8.6  -4.18018   CCGCCTGATCGAAAA CACGCGCGCGCGCGGCTACTC GGTGGT GGGCAACCACGCG-GTGCGCG GCGCGCTGGGCGTGG  75 197
CXD91_RS11230 2300400 .. 2300417 - -12.7  -4.19735   GGCTCCAAAAGCAAA             GACGCCC TCGC GGGCGTC              TTCTTCACGCTCGAG  91 53
CXD91_RS11220 2298488 .. 2298501 -  -9.5  -2.81966   GGAAATGCCATGACA               CGCCG GTGA CGGCG                CGCGGCCGCGCATCC  56 85
CXD91_RS11215 NONE
CXD91_RS11210 2295931 .. 2295956 - -19.1  -4.56597   CCGCGCCGGGAAAAA         GAGCCTGTCCC CGTC GGGACAGGCTC          TTTTCATTTGGCGTA 100 29
CXD91_RS11190 NONE
CXD91_RS11185 NONE
CXD91_RS11180 2290251 .. 2290261 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS11175 NONE
        tilS 2288072 .. 2288094 -    -9  -3.28924   TACTCTGGCTGACAA           GCCCGCATAG GGT CTGGGCGGGC           AAAGCTGAGTATTTT  61 83
CXD91_RS11165 NONE
CXD91_RS11160 2286577 .. 2286598 - -14.5  -5.45802   GCCGCAAAAGAAAAA           GGCCCTTGA TTGC TCAAGGGCC            TTTTTGATCTTTGGC 100 37
CXD91_RS11150 NONE
CXD91_RS11145 NONE
CXD91_RS11140 NONE
CXD91_RS11135 NONE
CXD91_RS11130 NONE
CXD91_RS11125 NONE
CXD91_RS11120 NONE
CXD91_RS11115 NONE
CXD91_RS11110 NONE
CXD91_RS11105 2276846 .. 2276856 -  -2.4  -2.66316   TGGTGCACGACATCA                 CCCC GTC GGTG                 TCCACGCTCAATGAA  38 477
CXD91_RS11095 2274689 .. 2274731 -  -8.2  -3.25073   GGCGCAACAGGAACA CCGGCCGGCCGGGCGC-CG CCTGTT CGAGCGCCTGGCGCGCGGG ATAGCCGCCGCTGTG  58 408
CXD91_RS11085 2272632 .. 2272654 - -10.6  -2.70932   CGCCGCGGCGAACCA           CCATGAGGGT CGC ACGCTCATGG           CGCACCGAACAGCGA  60 20
CXD91_RS11080 NONE
CXD91_RS11075 2270725 .. 2270741 -  -5.1  -4.12198   TACAAGGTTGTAAAA              CAGGC GCCGCCG GCCTG              CCCGCCTGTAAGGGA  64 45
CXD91_RS11070 2270518 .. 2270545 - -18.6  -5.04385   GACAGGCGCAAAAAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTCGGTACTGCTTGC 100 83
CXD91_RS11025 NONE
CXD91_RS11020 2261865 .. 2261885 -  -4.5  -3.19157   GACGAAGCGGACGAA            CTGGCCGCC TGG AGCGGGCCG            CCCATGCAGCGGCAA  47 99
CXD91_RS10995 2255536 .. 2255549 -  -9.5  -3.53091   AGCCGGCTTTTCAAA               CCGCC CGGC GGCGG                GTGCGGCGATACAGG  64 7
CXD91_RS10990 2255369 .. 2255393 - -17.2  -4.98531   CGCCCAAAGCAAAAA          GCCGCCATGC ACAAG GCATGGCGGC          TTTTCATATTGGCGC 100 35
CXD91_RS10985 2254664 .. 2254683 -    -5  -4.20696   CGACCAAGCCGAAAA            TTAGAGCG TTGA CGCTTTAA             TTCGCCTAGTATTTT  66 43
CXD91_RS10980 NONE
CXD91_RS10975 2252017 .. 2252042 -  -3.3  -3.61517   ATTTCGCGCGAATAA        TGGCCGTCGCC GGTTCA GGCG-C-GCCA         GCGGCGGTAGCCGCA  49 82
CXD91_RS10970 NONE
CXD91_RS10965 2248869 .. 2248883 -  -3.4  -3.96051   ACAGAACAGATGAAA               CATGGC GTA GCCTCG               TTGATGATGCCGCGC  58 131
CXD91_RS10960 2247809 .. 2247837 - -15.2  -3.53012   CGCCTGCTCCGGAAA        GCGCGCCCGGCC GCCGG GGCCGGGCAAGC        GGGATGGTTGCGCCC  81 41
CXD91_RS10955 NONE
CXD91_RS10950 2245689 .. 2245737 - -18.2  -2.90075   GCCCGGGGAACGACA CCTGCGGCAAGGGTGCCTGTCCC CGCA GGGACAGGCACCCTAGG-GCACG ACCTCGGCCAGCACC  86 16
CXD91_RS10920 2236981 .. 2237009 - -10.1  -3.06915   AGGTAGGCGACCGAA        GCCACCACGCCGC CAT GCGGCGCGCCCGC        GGCCTGAACGTTCTG  60 125
CXD91_RS10915 NONE
CXD91_RS10910 2235493 .. 2235512 -  -4.2    -3.889   CGCAAGGATAGCAAA            GGC-CGGCG AGC CGCCATACC            CCGGGATGCCCGTAT  57 62
CXD91_RS10905 NONE
CXD91_RS10900 NONE
CXD91_RS10895 NONE
CXD91_RS10890 2229047 .. 2229101 - -15.7  -2.71364   GGACTTCGTCAACGA TTGACGGTTGGCACGGTGCCTGTCCC CACG GGGACAGGCACCGCATCC-CCGCCTA CTCGTTCTCCGCCCC  75 23
CXD91_RS10880 2227437 .. 2227448 -  -7.2  -4.59773   CTTGAGCCCGAAAAA                GCGG AGCG CCGC                 CATGCTGGATATAGA  79 84
CXD91_RS10860 NONE
CXD91_RS10855 NONE
CXD91_RS10850 NONE
CXD91_RS10845 2221352 .. 2221368 -    -3  -2.78679   CGCCGGGACGGAAAG              GAAATG GCGCG CATCTC              AGGCCCCCTCGCCCG  40 24
CXD91_RS10840 NONE
        cpaB 2219957 .. 2219971 -  -3.5  -3.01791   AGCTGTTCGTCAATA               GCGCA CTGCC TGCAC               GTCGCCGCCGCGCAC  44 5
CXD91_RS10830 NONE
CXD91_RS10825 2217144 .. 2217167 - -12.4  -3.16564   TTCGGACGCGATGAA          TTCGCCGCCG CCCG CGGCGCCGAA           TTCCATGGATGGCGG  69 58
CXD91_RS10815 NONE
CXD91_RS10810 NONE
CXD91_RS10805 NONE
CXD91_RS10795 NONE
CXD91_RS10790 2208984 .. 2209020 -  -4.4  -3.04398   GCGGTTTCGTAAAAC   CCGTGGCCCAACCCG GCCGGTTA CGGATCGG-CCACGC    CATCGGCCGTTTCGG  45 9
CXD91_RS10785 2208165 .. 2208180 -  -3.2  -3.83318   CCGGCAATAATACAA              GCGTAG CCGC CTATGC               CCCGCCCCGCCATAC  56 74
CXD91_RS10780 NONE
CXD91_RS10775 2206794 .. 2206820 - -11.5  -3.65351   CGAGCTGGACGGAAA        TGCCGGC-CCGC GGCC GCGGCGCCGGCG         AACCGGCGCCGGACC  75 105
CXD91_RS10770 2206196 .. 2206208 -  -2.6  -3.29471   CGTTCATGATACGAA                GGCC GAAGG GACC                GGGGGCTCGCCCAGC  44 1
CXD91_RS10765 2205688 .. 2205707 - -16.4  -3.75629   CAGGCGCAACCGAAA            CGGGCCGC ATGC GCGGCCCG             TTTTTTTTGCCCCGG  88 95
CXD91_RS10745 2201383 .. 2201395 -  -7.7  -2.71144   CATCGTGGGCAACGA                GACGT TCG ACGTC                ACGGGCCTGGAGGGC  49 311
CXD91_RS10730 2195413 .. 2195438 -  -4.7  -3.06696   TTGCGTTTCAAGACA         TGCAGGACGTGA ACC CCA-GTCCTGCG         CCAGGCGAGCATTGC  45 133
CXD91_RS10725 2194369 .. 2194403 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 271
CXD91_RS10695 NONE
CXD91_RS10690 2188219 .. 2188238 -  -9.2  -2.72344   GCCGATTTCGAAGCA            GGCGTGGC GCAG GCCAGGCC             GCTGTTCATGCGCGC  52 243
CXD91_RS10680 2187724 .. 2187742 -  -4.4  -3.66018   GGAGGATGGGAAGAA             TCAGTCGG GCA CCGGCTGG             CTGGCCTGTTCACCC  55 7
CXD91_RS10675 NONE
CXD91_RS10670 2185619 .. 2185665 -  -7.2  -3.55444   CTCCGATTCCGTAAA GCGACGGAACACGCTCGCCGAT TTCCG ACCGGCAGGCG-GA-CCGCCGC CTGGCTCCCCTTTGT  58 339
CXD91_RS10665 2184873 .. 2184907 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 262
CXD91_RS10645 2181009 .. 2181042 - -15.9  -2.70932   GCGCCGCTTCAAGGA     CGACGAGGCGGACGC GCCG GCGCCGGCCACGTCG      GCCGCGGCCGCGCGC  75 93
CXD91_RS10630 2178375 .. 2178431 -  -7.2  -4.64334   AACGCCGCAACAAAA CCCTGGTTGGCG-GCGGCTGCCCCGCC TTGCGC GG-GGGGCCGCCGCGCGTGGAC-AGGG CCGCACGCGCCTTGC  79 173
CXD91_RS10625 NONE
CXD91_RS10620 NONE
CXD91_RS10615 2175790 .. 2175828 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD91_RS10610 2172555 .. 2172565 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 2172346 .. 2172380 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD91_RS10585 2168428 .. 2168450 -  -4.7  -2.70932   GCGCCGCGCCAACGA           GGAGCTGCG CCACC CGCTGCTGC           AGCATCGGCCGTTCA  43 296
CXD91_RS10540 2159963 .. 2159973 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 180
CXD91_RS10535 2158914 .. 2158924 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS10530 2157726 .. 2157765 -  -8.4  -3.60098   AGGCGCTAGCGTAAA  CCCATG-GCCGCGCACGCG CAA CGCGCGGGCGACTCCTGTG  TTTGCCACGGCGCTT  62 170
CXD91_RS10525 2155455 .. 2155468 -  -5.9  -3.82824   CACGATCGACAAGAA               CGGCA TCGA CGCCG                TCCTGGCCGACCTGC  63 408
CXD91_RS10500 2151187 .. 2151241 - -11.8  -3.84712   CAATTGGAGATGAAA TGATTTGCGACGGCCGACCCCGGCGC ATG GCGCCGGGGTCGGCGGCATCCTAGCT GTGAACTGTCAATAG  79 20
CXD91_RS10495 2149651 .. 2149663 -  -4.7  -2.71712   CGCGGCCCGGGAAAG                GGCCG CTC CGGCG                TACGGGGCCGGCGAC  43 145
CXD91_RS10490 NONE
CXD91_RS10485 2147422 .. 2147441 - -11.4  -4.11692   GAGCGATTGGGAAAA            CGGCCACC CACT GGTGACCG             TCTTCCATCATATCG  82 78
CXD91_RS10480 2146997 .. 2147012 -    -6  -2.83112   ATGCAATCGATCATA              CCGCCG CTCG CCGCGG               CATGCCTCAGCGGCC  48 32
CXD91_RS10475 2145670 .. 2145697 -  -2.5  -3.08679   GGGGTGTAGCGAATA        GGCATCGCGGC ATTGTA GCCACTGCGCC         CCCCCCTCGCCGCAG  42 87
CXD91_RS10470 2144828 .. 2144840 -  -3.3  -3.78793   CATAATTATGAATAA                GGCGA TGG TAGCC                TGCTTTGCGGCGGCC  56 89
CXD91_RS10465 2143955 .. 2143982 -    -9  -3.01712   TGTCTCGCTCGAACA        GCCGGCCCAGCC GGGC GATCAGGCCGGC         GCTTTCGCCGGCGGC  57 69
CXD91_RS10460 NONE
CXD91_RS10455 2141482 .. 2141511 -  -8.5  -2.62983   CGGACGTGTACAGGA       TGGCG-GCCAGGTC GTC GGCCTTGCGCGCCA       CCGTCCTGAAGCGCT  52 485
CXD91_RS10445 2139204 .. 2139227 - -13.8    -4.015   CCAGCGATGAAAGAA          GAGCCGCGCC GGCC GGCGCCGCTC           CCCTTTCGTCCCTCA  84 53
CXD91_RS10440 2138560 .. 2138579 -  -5.6  -3.32343   GGGATATCCCTAGAA            CGGCCGGCC GCG GGACGGC-G            CAACCCCTACTTCAC  51 32
CXD91_RS10435 2137414 .. 2137445 - -20.8  -2.71712   GTGTTCGGTGGAAAT      GCCGGCCGGGCGCC GCGC GGCGCCCGGCCGAA       TACGCGATTACTTGA 100 33
CXD91_RS10425 2135383 .. 2135426 - -10.9  -3.14344   CATCGCCTTGATCAA GGCGCAGGCGGTGCTGCTGGG CCTG CCCGGCC-C-CGGCCTGCGCC TGTCCGCGCGCAACC  64 257
CXD91_RS10415 NONE
CXD91_RS10410 NONE
CXD91_RS10405 2132202 .. 2132218 -  -2.1  -4.62069   CGCTGAGGCGAAAAA              CGCATGG ATT CCTCACG              GAGGTAAAAGCGCGC  70 266
CXD91_RS10400 2130842 .. 2130873 -   -15  -4.26076   CGATGCTCACGAAAA      GGGAACGCGGCGCC GTCG GGCGCCGCGCGCCG       CTTAGGACTGCTGGC  95 27
CXD91_RS10395 2127345 .. 2127376 -  -6.5  -3.61398   CGCGTCGCGGAAGAA      CTCGCACCAGCCGA TCTCG TCGGCCGGCGTG-G      CGCCCTGCGGCGCCA  56 227
CXD91_RS10385 2125321 .. 2125339 - -11.6  -2.56271   TCGTGATGATAATAC             GCCGGGCG CCC CGCCCTGC             TTCAGGCGTGGCCGC  61 27
CXD91_RS10380 NONE
CXD91_RS10375 NONE
        uvrC NONE
        pgsA 2121199 .. 2121209 -  -8.2  -3.85698   CGCGGTCTCCAGAAA                 GCGG CGG CCGC                 GAACCAGCCCGCCAC  68 111
        aceA 2117327 .. 2117348 - -11.5  -6.06723   GGCGGCAAAAAAAAA           GGGGGCGTC CGAG GACGCCCCA            AATCCACCCTGCAAC 100 85
CXD91_RS10345 2115928 .. 2115944 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD91_RS10320 NONE
CXD91_RS10315 NONE
CXD91_RS10310 NONE
CXD91_RS10305 2108819 .. 2108832 -  -2.4  -4.25658   AGGCGATGAAAATAA               TCGT TGTCAT ACGA                GGCGTTCCCGTCGTG  62 43
CXD91_RS10300 NONE
CXD91_RS10295 2107258 .. 2107273 -  -6.1  -3.20382   TTCCAGATCTACGAA              GCGCT GGCCGA AGCGC               AGGAGTCGATCGACG  50 100
CXD91_RS10265 NONE
CXD91_RS10260 2097717 .. 2097727 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS10255 NONE
CXD91_RS10250 NONE
CXD91_RS10245 2095106 .. 2095124 -  -6.8  -3.28712   TCCTGCGGTTTATAA             GATGTATC TAT AATACATC             TTATGGCTTAGGCAT  54 442
CXD91_RS10235 NONE
CXD91_RS10230 NONE
CXD91_RS10225 2092965 .. 2092981 -  -2.1  -3.08046   TTCTCACTGCAAAAG              TTCGGCC AAC GGCGGAT              TTTCGCAGATTTGGG  42 60
         xth NONE
CXD91_RS10215 2090549 .. 2090560 -  -2.2  -2.90571   AAGTCCGCAACTATA                CACGG ATT CCG-G                CCGTTTTGGTAGCGG  40 82
CXD91_RS10210 2090410 .. 2090437 - -12.8  -5.63517   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT 100 42
CXD91_RS10170 2084122 .. 2084149 - -18.4  -2.50443   GGAGAGGGCAGGAAG        CGGGCGCGCGCA GGCG TGCGCGCGCCTG         GCCGGGAGGCGTCTG  87 406
CXD91_RS10145 2079891 .. 2079909 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 249
CXD91_RS10115 2074402 .. 2074412 -  -2.4  -2.71461   AGAATAGGAAACCGA                 GGCC CGT GGCG                 GCAATGCCGATTGCT  38 101
CXD91_RS10110 NONE
CXD91_RS10105 NONE
CXD91_RS10100 NONE
CXD91_RS10095 2069142 .. 2069188 - -17.2  -3.56821   AGGAGATCCTGGAAA GCCGGCGCCAGGCCGGCGAAG GGGACG CCGCGCCGGCC-GGCGGCGAC GGGCCTGCGCCGCTG  93 418
CXD91_RS10080 NONE
CXD91_RS10075 NONE
CXD91_RS10070 2065564 .. 2065598 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 213
CXD91_RS10050 2063154 .. 2063164 -  -2.4  -2.71712   TCTCGCGGGCGAAAG                 CGGG CCC CCAG                 TATCCCGGCAAGCGG  38 75
CXD91_RS10045 NONE
CXD91_RS10040 2060106 .. 2060137 -  -6.4  -3.23216   CCGCACGAGCACGAA      CGCACCGGCCACCAG GGG CCCGAGGC-GGCGCG      CGTCAATCGCGTCTG  50 480
CXD91_RS10030 2058882 .. 2058939 - -21.1  -2.83403   GCGCCGCCAGGAAAG CCGCCATCGCCCGGGCCGCCGCCCGGC ATGG GCCGGGCGGCGGTTCGAAGGACGAAGG ATGTTGCTATTAAAC 100 102
CXD91_RS10025 2058081 .. 2058107 -   -10   -3.5393   ATGATCCGGCGCAAA         TGGCCGCTCAAC TGA GCAGGGCGGCCA         CCAGATCGCGGTTGG  67 6
CXD91_RS10020 2055839 .. 2055859 -  -5.3  -3.57144   GCCTGGACGCGCAAA            GTATCCGCT TCG AGCGGCTGC            TGCCCGGGCCCATCG  54 514
CXD91_RS10005 2054397 .. 2054448 - -11.6  -3.14931   GGGATGGCGCAGCAA CTGGCCGGCGCCGAG-CGCATCGTCG ACGC CG-CGGTGCGGCGCG-CGCCGGCC-G ACTGAGCCGGGCGCG  66 41
CXD91_RS09995 2053525 .. 2053556 - -24.6  -2.82759   AAGATACCTATGACA      CAGGAGCCTGTCCC GACG GGGACAGGCTCCTG       CCGAATCCTTCCGTA 100 121
CXD91_RS09985 2051710 .. 2051728 - -10.2  -3.01712   TCCTGCCGCTGAACA             GCCGCGAG CGC CTGGCGGC             GATGCGCTACGACCT  59 358
CXD91_RS09975 2049725 .. 2049740 - -10.4  -2.78384   GGGTGGCCGACTATA              TCGCGC GGCT GCGCGA               CGACCCCGAGCTGGC  56 498
CXD91_RS09960 2047152 .. 2047174 - -11.3  -2.70932   GGCGCTGTCGAATTA           CCAGCAGAC CAAGT GCCTGCTGG           TGAGCTACAGCGCCA  59 148
CXD91_RS09950 2043366 .. 2043400 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CXD91_RS09905 2035396 .. 2035430 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS09895 2033505 .. 2033532 -  -5.5  -3.66058   ACAGCAGATAGAGAA        TGCTCATGGCGC GGGTT GCGCCACG-GCG        GCGGCGGGCGCGGCG  57 1
        ccoS 2032962 .. 2032985 -  -7.4  -3.28924   CAGCTTGTCGCAGAA          CAGCCGCGCCT GAC AGGTGCG-CTG          CACCACGTAATACGA  56 408
        ccoO NONE
CXD91_RS09875 NONE
        ccoP NONE
        ccoG NONE
CXD91_RS09860 NONE
CXD91_RS09855 2027890 .. 2027907 -  -3.3   -3.6761   GCGTCGCAACAAACA             CGGCGCT TCAG AACGGCG              TCTCGTCCTGGCCGC  53 15
CXD91_RS09850 NONE
CXD91_RS09845 NONE
CXD91_RS09840 NONE
CXD91_RS09835 2024267 .. 2024294 -  -6.2  -3.01712   CGCCGGGCCCGAACA        GGGCGTCGCGCTG GCG CAGCT-GACGGCC        GCCACCATCCGGGCC  48 476
CXD91_RS09825 NONE
CXD91_RS09820 2022134 .. 2022158 -  -4.9  -3.77087   GAGTGAACATGGAAA          TCCGCCCCG TACGCAC CGAGGCCGA          TTACAAGTCGGCTCT  58 361
CXD91_RS09810 2021062 .. 2021079 -  -8.3  -3.67954   CAAATAGAGGCCAAA             GCGCTGC GCAA GCTGCGC              CACCCCAGCCGCGCC  67 483
CXD91_RS09795 2018064 .. 2018081 -  -8.3  -3.63968   GCCGAAATGGCGAAA             CTGGCCG AAAG CGGCCTG              GCGACCGACGAGGCG  63 129
CXD91_RS09700 1996252 .. 1996270 - -17.4  -3.15544   TGCCATGGGCAGGAA             CCCCCGGC CGC GCCGGGGG             GCCCTTGCGTTCAGA  84 36
CXD91_RS09685 1993273 .. 1993283 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS09675 1992251 .. 1992290 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGCCCAGG  64 4
CXD91_RS09670 NONE
CXD91_RS09665 NONE
CXD91_RS09660 1989438 .. 1989460 - -11.2  -3.57144   CGGGCGAGCGCGAAA           GCTAGGGCGC GCG GCGCGCCAGC           GCGGCCAGCGCGTCG  70 4
CXD91_RS09640 1986688 .. 1986707 - -16.4  -3.90112   CTGCCGGCAAGCAAA            CGGCCCGC GCAA GCGGGCCG             TTTGTCTTGGCGCGA  93 53
CXD91_RS09550 NONE
CXD91_RS09545 1965837 .. 1965855 - -17.4  -3.10522   AGGCGACGCAACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGCGTAC  84 135
CXD91_RS09490 1953988 .. 1953998 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 86
CXD91_RS09485 1952615 .. 1952630 -    -6  -2.50699   GCTCAAGGAAGATAT              GGTGGC GTTT GCCGCC               GAGCATTTCGACCTG  44 379
CXD91_RS09425 1942079 .. 1942107 - -19.7  -4.15508   AAGCAAGCCGCAAAA        GAAAAGCGGAGCC ATG GGCTCCGCTTCTC        GATGCCGGCCGTGCC 100 45
        lexA 1941284 .. 1941298 - -12.8  -4.74103   GCCCCAAGGCAAAAA               GCCCCC TCG GGGGGC               AGCAAGCCCGCGTAG 100 75
CXD91_RS09335 1926565 .. 1926589 - -22.9  -4.11692   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTCGGCTATC 100 91
CXD91_RS09310 1919712 .. 1919737 - -14.7  -5.14563   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 45
CXD91_RS09275 1915172 .. 1915208 -   -21  -4.59773   CCCCATCCGTAAAAA    GAACTGCCGTCATCCC TTGTG GGGATGGCGGCAGTTC    GACTGCGCACGCGAA 100 70
        dapD NONE
CXD91_RS09255 NONE
CXD91_RS09250 1910813 .. 1910823 -  -4.6  -2.64912   GGGTCAAGCCAGAAG                 CGCG TAT CACG                 TGTTCAATTGTTCGC  42 21
CXD91_RS09245 1908838 .. 1908848 -  -2.4  -3.58365   GAGTATAGGAGATAA                 TGCG TCT CGCT                 GGTTTTACGCTGCGC  48 74
CXD91_RS09240 1905448 .. 1905462 -  -7.1  -3.53012   CCCGGGCCCGGGAAA               GGCTG TATCT CAGCC               TGGCGCAAAGCCGCA  58 488
CXD91_RS09225 1901531 .. 1901565 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS09210 NONE
CXD91_RS09205 NONE
CXD91_RS09200 1894212 .. 1894227 -    -6  -4.08945   AGCATGGCGGGAAAA              GGGCGC GGCG GCGCCG               CCTGTCAAAGTGGTG  66 104
       coaBC 1892775 .. 1892827 -  -9.2  -3.53174   AGAGGCGGAGAAACA GCAACTG-GA-AGCCCGGCC-GCGC TTTCTG GCGCTGGCCTGGCTGTCGCTGTCGC ATTCGCTGATCGAGG  61 191
CXD91_RS09185 1891421 .. 1891443 -  -6.8  -2.84298   GACAGTTCACAACTA           GCGCGGCGCC GCG GGCACGGCGA           CCACGGGCTCGTCCT  50 0
CXD91_RS09155 1886283 .. 1886299 -  -2.1  -3.61398   TTGCGCGGTGAAGAA              GACATCC GCC GGCTGGC              CGGCCATACCTTGCT  50 223
        cphA 1880772 .. 1880792 - -15.4  -3.61398   CCTGTCGTCGAAGAA            GCGCCGCC GTTCG GGCGGCGC            GGCAAGAGGGGCGAA  83 50
        cphA 1878097 .. 1878114 - -14.1  -5.28176   CGCAGGGAGAAAAAA             GGCCGGC TTGC GCCGGCC              CAAGTTACATTTGAG 100 84
CXD91_RS09130 NONE
CXD91_RS09125 NONE
CXD91_RS09120 1877049 .. 1877070 - -15.9  -5.86965   AGGCACCAAAAAAAA           GCCTTCGGG CGAA CCCGAAGGC            GGTACACGTACGGCG 100 73
CXD91_RS09095 1873518 .. 1873536 -  -5.9  -3.16564   CGCCGAGGCCATCAA             GGGCGAC GCTCA GTCGGCC             GCAGGCTGAGCCAGC  51 16
CXD91_RS09085 1870587 .. 1870613 -  -5.1   -2.8352   CGGTAACTGAACAAG        GCGGCTCCG-CGT CAG ACGGCGG-GCCGG        ATGGTGGCCAGCTCG  46 10
        rlmJ 1869298 .. 1869340 -  -8.8  -3.28924   CATCGCCGGCGAGAA CGCCGCGCGCTATCCGGACG TCG CGCCGGGCCTGCGCCGGGCG GCGCTGGGCGTGGTG  59 407
        cueR 1866459 .. 1866481 -  -8.3  -3.29144   CCAGGCGCGGCAGAA           GGCGCGCGA GGAGG CCGAGCGCC           TTGCCGAGGCGGCCG  58 72
        plsY 1859102 .. 1859130 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGCGCGGTGG  56 162
CXD91_RS09015 1857579 .. 1857606 -  -9.8  -2.52464   GGCGGCGGCAACGCA        GGCCGCCATC GTCGAGGT GCTGGCGGCC         AAGGCCATCCGCGCC  55 402
CXD91_RS09005 1855364 .. 1855394 - -18.3  -3.58343   TTGACGACCTCGAAA       GCAGGCAGGCCGC GCGAG GCGGCCTGCTTGC       GGGGCGAGGCGCGCG  90 49
CXD91_RS08995 1853539 .. 1853554 -  -4.6  -3.64703   GCGTGCGCAGCGAAA              CCTTCG ACGC CGACGG               CGCGCAACTGGAATT  54 146
CXD91_RS08970 NONE
CXD91_RS08965 NONE
CXD91_RS08960 NONE
CXD91_RS08955 1844411 .. 1844421 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS08950 1843216 .. 1843230 -  -8.5  -3.35813   GTCGAGGTTAACGAA               GCCGC GCCGA GCGGC               CCCTTATTCCAGGCA  59 202
CXD91_RS08925 1837789 .. 1837802 -  -8.1  -3.06261   CGCGAACGCGGAACA               GCTCG AAGC CGAGC                TGGCGGCGCAGGTCG  52 279
CXD91_RS08915 NONE
         alr NONE
CXD91_RS08900 NONE
CXD91_RS08895 1830014 .. 1830029 -    -6  -3.53811   GTTACGTGGTGGAAA              CCGGCG AGAC CGCCGC               GGACCGCATGCTGCG  56 158
CXD91_RS08880 1827855 .. 1827888 -  -2.3  -3.60792   AGCATTCAGATACAA     CGCGCTGAACGTCTT CCGT AAAACTTACGACGCG      ACGTATGGGGACTAC  48 37
CXD91_RS08875 1826690 .. 1826700 -  -2.4  -4.07568   CCCGGGTTCGGAAAA                 GCAG CAT CAGC                 ACGCTGGCGGTGGTG  58 448
CXD91_RS08765 NONE
        sycN NONE
CXD91_RS08755 NONE
CXD91_RS08750 NONE
CXD91_RS08745 NONE
CXD91_RS08740 NONE
CXD91_RS08735 NONE
CXD91_RS08730 1805067 .. 1805088 - -12.9  -3.01712   CCTCGGCCCCGAATA           TCGCCGCGC TGAC GCGCGGCGT            CTAGGTCGGCGGCGA  70 65
CXD91_RS08720 1802845 .. 1802857 -  -4.1  -3.55444   GCGCGACCGTGGAAA                TCGAA GAC CTCGA                CTCGGGCGACCGCCT  51 511
CXD91_RS08710 1799766 .. 1799806 -  -3.2  -3.28712   CCTGGTGGCCGAGAA CCTGGGCCACGTGAAGGCGG TCG CCGCCATGAC-CGGAC-AGG ACCTGGACCGCTACG  47 523
CXD91_RS08700 1798495 .. 1798519 - -11.4  -3.14344   GATGCGCGCCATCAA         CGGCGCGGCCG GCTT CAG-CGCGCCG          CCAGCCGCTGCGCCA  66 15
CXD91_RS08695 1796886 .. 1796920 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS08660 NONE
CXD91_RS08655 1788784 .. 1788800 - -15.1  -3.05384   GGCCTGCCGACCGAA              GCCGGCG CCA CGCCGGC              CGTCTCGGCGCAGCC  74 475
        htpX 1786397 .. 1786416 - -16.4  -4.18018   TTGGCTCATGCAAAA            CGCGCCCC TTGC GGGGCGCG             TTTTCGCTGGCGGAC 100 52
CXD91_RS08625 NONE
CXD91_RS08620 NONE
CXD91_RS08610 NONE
CXD91_RS08605 1778122 .. 1778177 -  -5.5  -2.82623   GCGCTGGGACAAGTA CCACATCG-A-CATCCTGTGCGC-GCAC TTC GTGCAGCACCCGGACTGGTTCGATGTGG TGGTGGCGTCCAACC  44 400
CXD91_RS08590 NONE
CXD91_RS08585 NONE
CXD91_RS08580 NONE
CXD91_RS08575 1770021 .. 1770055 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        gabT NONE
CXD91_RS08560 NONE
CXD91_RS08555 NONE
CXD91_RS08550 NONE
CXD91_RS08545 NONE
CXD91_RS08540 1762657 .. 1762713 -  -3.7  -3.53012   GCCTGCGCCGCGAAA CGGTGGCGCAGCTGGCGGC-CAAGA TCCGCGCCT TCCTGCGCGGCGAGCCG-GTCACCG GCATGGTGACGCGCC  49 65
CXD91_RS08530 1759814 .. 1759830 -  -2.1  -3.17051   CCGGCACCAGCAACA              GCGCGGT GCA ATCGGGC              CTGATAGGCATGATA  43 498
CXD91_RS08515 1756422 .. 1756440 - -17.4  -3.55622   GGCAAGGCCGGGAAA             CGGGCGGC ATG GCCGCCCG             GACGGTTATTGCGCT  89 31
        purD NONE
CXD91_RS08505 NONE
        nadD 1753480 .. 1753492 - -10.5  -3.93489   TAACGATAAATATAA                CCCGC GGC GCGGG                TGTCGATGTGGCGGA  77 60
        rsfS NONE
        rlmH NONE
CXD91_RS08485 1751485 .. 1751515 -  -7.5  -2.73364   GGTCGATGCCAAGCA      CCGCAGCCACG-GC CTGG GCGCGTTGCTGCGC       GGCGGGCGCCGTATC  49 472
CXD91_RS08450 NONE
CXD91_RS08445 NONE
CXD91_RS08440 1740229 .. 1740248 -  -7.8  -3.67597   GGCGCTATTGAAGAA            CCCGGC-CG CTG CATGCCGGG            CCCGATGCGCTAGAT  63 35
CXD91_RS08425 1736904 .. 1736924 - -15.4  -2.57132   CCGGTGGGCCAGAAT            GCCGCCCG CCTGT CGGGCGGC            CAGCGCCAGCGCCTG  69 298
CXD91_RS08415 NONE
CXD91_RS08410 NONE
CXD91_RS08405 1733221 .. 1733259 - -19.7  -3.01712   CGGCGCCCGTCAACA  CTGCGGTGTGCCTGTCCC AGTG GGGACAGGCACACCTC-G   CCGCGGATGTCAGCT 100 84
CXD91_RS08390 1728883 .. 1728922 -    -2  -3.44527   CACCGATTACGACAA GGGCTGGCTCGACC-TGG TGGCTG CCGCGGGC-AGCCTGCCC  GCGCCGCTACGCGAG  47 463
        lpxO 1721008 .. 1721043 - -20.4  -2.53015   ACAGGCGCCAAGTCA    GCGGGTGCCAGTCCCC CCGC GGGGACAGGCACCCGG     GTGGTTAGAGTGCCA  95 30
CXD91_RS08350 1715449 .. 1715503 - -13.5  -3.04322   GGTAAGTTGCGAACA GGCCAT-TTTAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTGGTTACAGCT TCTTGATGAAAACCA  70 18
CXD91_RS08345 1715107 .. 1715122 - -11.8  -4.90266   GGCATCAATGAAAAA              CCGGCC TGCC GGCCGG               TTGCGATGAGGCGAA 100 53
CXD91_RS08340 1713097 .. 1713119 - -12.6  -3.61715   CACCGGGGTCAAGAA           CACCGAGCGC CTG GCGCGCGGCG           AAGAAGCCATCGAGA  74 122
CXD91_RS08315 1707087 .. 1707141 -  -7.2  -3.39327   CGGCTACACCCACAA GCGGCGCGCGTTGTTCATG--GAC GGGGGCGTG GTCTACATGTACTACGCGCGCGGC GGCGATTCGCTCAAT  55 480
CXD91_RS08265 NONE
CXD91_RS08260 1697023 .. 1697033 -  -3.2  -2.63631   TCAACTGCGACATGA                 TGGA TAG CCCA                 GGTTGCTCGAAGGGA  39 53
CXD91_RS08255 1695698 .. 1695708 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS08250 1694639 .. 1694674 - -14.7  -2.70932   GGTGGGCGGGAACGA   CGCGGCGGCGC-CGCGG CGGG CCGCCTGC-CCGCCGCG    CTGAGATGCACTAGA  72 45
CXD91_RS08205 1686332 .. 1686353 - -14.4  -4.07885   GACGGTCCTGCAAAA           CGGGCCCG TCTGCG CGGGCCCG            TGGCGGCAATGCCGG  85 42
CXD91_RS08195 NONE
        acnD NONE
        prpF NONE
CXD91_RS08180 NONE
CXD91_RS08175 1678010 .. 1678023 -  -3.9  -3.53012   TCGCTGGCGCGGAAA               TCAAA AGGG TTTGA                CGACAACCAGCGTGA  51 12
CXD91_RS08170 1676564 .. 1676575 -  -7.2  -3.28712   GCGGCGCTTTTACAA                CGCC GCGT GGCG                 CGCGGGCCGGCGCTT  54 39
CXD91_RS08165 1676104 .. 1676122 -  -7.4  -5.75342   CCCGGCCAAAAAAAA             CCCGCT GGTTTAG AGCGGG             TCTTAAAAGGGGCTT 100 96
CXD91_RS08155 1674559 .. 1674579 -  -8.3  -3.09492   CCGTGAACTGCAACA            TCCCCGT ATCCCTA ACGGGGA            CGTATAAGGGTTATT  56 39
CXD91_RS08150 NONE
CXD91_RS08145 NONE
        hslO NONE
CXD91_RS08135 1670025 .. 1670041 -  -7.9  -2.84325   GCCCGGCAAATACGA              CCAGGCC TTC GGCGTGG              ACAAGTCCGGCCTGT  52 449
CXD91_RS08115 1666518 .. 1666551 - -27.5  -3.16742   GTTAATGGTCAGTAA     TCCGGCCAGGCCGCG GCAT CGCGGCCCGGCCGGA      AACCGCTGTCTTCCG 100 487
CXD91_RS08020 1646077 .. 1646123 - -16.5  -5.00884   ACGGTCTGGAAAAAA GGCGC-CGCGAGGGCGCCTGGTA TCC TGCC-GGCGCCCACGTGCGCGCC CGCGCTTACATGCCG 100 31
CXD91_RS08015 NONE
CXD91_RS08010 NONE
CXD91_RS08005 1643377 .. 1643395 -  -8.8  -3.45849   GCTAGACCACGACAA             CGCGGC GCGGCTG GCCGCG             GGCCTGGACGGCATC  61 273
CXD91_RS07970 1634786 .. 1634803 - -14.1  -4.41494   GAGGCCCAAGCAAAA             GCGCCCC GGAC GGGGCGC              TTTTGCTTGGGCCTT 100 61
CXD91_RS07960 1633105 .. 1633134 -  -8.5  -3.05596   CAGGTGGTCAGCGAA       GCGGTGCAGGGCCG GGC CGGCC-TGAACGGC       TAGTTGTGAACTGTC  55 25
CXD91_RS07940 NONE
CXD91_RS07930 NONE
CXD91_RS07925 1625080 .. 1625107 - -18.4  -2.71924   CAGCCTCCCGGAAAG        GCGGGCGAGTCC GTCA GGCCTCGCCCGC         GCGGCTCAGGTCATG  87 11
CXD91_RS07920 1624725 .. 1624744 -  -2.7  -3.63266   AAAATCCATCGGAAA            CCGGGCC CTGTTC AGCCGGG             CCGTACGTTGCGCAT  53 17
CXD91_RS07915 1623884 .. 1623902 - -14.6  -5.78622   GGAGGCGAAAAAAAA             GGCTTGCC GTT GGCAAGCC             TTTTTCGCTGCGCAG 100 50
CXD91_RS07910 1622771 .. 1622793 -  -5.5  -3.83026   CCGCGGCACATGAAA          GATCCGC-CC GGCT GGTGCGGGTC           ATGGGTTGGCCGCCT  60 24
CXD91_RS07905 1621670 .. 1621680 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 171
CXD91_RS07895 1619423 .. 1619470 -  -7.4  -3.64822   ACGCCGCCATCGAAA CGCCGTATTCGTCCACCGTCTG CCAA CTGGCGCTGGCCGGCCACGGCG TGGGCATCGCCAACC  60 228
         maf NONE
CXD91_RS07790 NONE
CXD91_RS07785 1600456 .. 1600501 - -13.1  -2.71712   TCGTCTTCGCGAAAG CCGCCGCCGCGCGGCAGGGCGC GCA GCACCATGTCGCGCG-CGGCCT GGTGCTTCTCCGTCA  67 217
CXD91_RS07690 1580000 .. 1580056 - -11.5  -3.65812   GGCTGCCGAACAGAA GCCCGGCCAGTAGCCCGGGCGGCAAGCC GCGC GGCGT-CCGGCCGC-CT-CAGGCCGGGC GCGTGCGCCGGACCT  75 15
        mobA NONE
CXD91_RS07625 NONE
        mobB 1566411 .. 1566423 -  -3.3  -4.36914   CGCTGTGGCAGAAAA                TGGGC GCG GCCGA                CGGCAATGCGCCGCC  67 162
CXD91_RS07590 NONE
CXD91_RS07585 NONE
CXD91_RS07580 NONE
CXD91_RS07575 1557161 .. 1557185 - -11.3  -3.57792   CGACGTATTGCGAAA          GCCTGCGGCTG GAG CTGGCGCAGGC          CGGCGTGCGGGTGGT  70 398
         tal 1550895 .. 1550905 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS07550 1549846 .. 1549856 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS07540 1548559 .. 1548572 -  -4.5  -3.28924   CATCTCGGTGCACAA               CCGCGC CCA GC-CGG               TGCAGGCGGCGCTGG  49 295
        smpB 1541766 .. 1541779 -  -5.9  -2.71364   GTACGCGGCCAAGCA               GGCCG GCCG CGACC                GCATCAGGAATCGCG  47 29
CXD91_RS07480 1538331 .. 1538352 -  -8.6  -4.56597   CGGCGTGCTGAAAAA           GCGCGAGG TCAACG CCGCGCGC            AACGCCGACGTCAAC  83 258
CXD91_RS07470 1537235 .. 1537255 -   -14  -4.77036   CGGCAGCAGGAAAAA            GCCTCGCC CTTGC GGCGAGGC            TTTTTTTCGCCGGGC 100 52
CXD91_RS07460 1533586 .. 1533596 -  -2.4  -3.16492   GCATATCCACGAACA                 CCTG GAC CTGG                 AGGCAGTGCTGCCGC  43 291
         map 1516691 .. 1516708 -  -5.5  -2.87132   GGCGGGGGTCAGAGA             GCCGG GATTTCGA CCGGC              CGTGTCACGAAGGCC  46 1
CXD91_RS07370 1513647 .. 1513662 -  -7.5  -3.30124   GGTGAGCGGGTAGAA              GGCGC GCGCCT GCGCC               ATCTCGGGCGTGAAC  56 420
CXD91_RS07360 1512727 .. 1512783 - -31.9  -2.71364   CTACGCGGCCAACGA CGCCTGACCGGCGCGGCGCGGCCGGCTT GCGC AAGCCGGCCGCGC-G-GCCG-TCAGGCG TTGCGCCGCAACGCC 100 19
CXD91_RS07335 1507744 .. 1507756 -  -3.3  -4.57569   CGATTCTGTCAAAAA                TTGGC GCC GCCTA                TTGGCCGGGTAAAGG  71 117
CXD91_RS07330 NONE
        fliS 1505884 .. 1505909 -  -3.1  -4.82901   GCGGCTGGACAAAAA         GTGCCTTCCTG GTTT CAGGCCGGAAC          GGCAGGCGCAGGGTG  75 14
CXD91_RS07320 NONE
CXD91_RS07315 NONE
CXD91_RS07310 NONE
CXD91_RS07305 NONE
CXD91_RS07300 1503200 .. 1503249 - -11.4  -3.53444   GCATGCTGTCGCAAA TGCGCGCCGTGGTGCGCGCCG-CGC AAA GCGGCGGCGC-CACCGAGGC-CGAA CTGGCGCCTGGGCCG  69 276
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1497384 .. 1497435 -  -4.4  -3.30441   CAGCACTTGCGAGAA GCTGGGACCCTTGCCG-GC--GGCGGC CGG GCCGCCTTGCGCGGCC-GGA-CCCGGC GCAGGCGTCAGGGCG  49 96
CXD91_RS07260 1495054 .. 1495071 - -10.5  -2.52464   TTCTGCCGCAATTCA             CGCCCGC GCTG GCAGGCG              AAAAACAGGGCGAAA  56 308
        fliL NONE
        fliM NONE
        fliN 1492899 .. 1492913 -  -5.6  -3.14564   GGATTCGGTCATGAA               GCGGCT TTT AGCGGC               GACTGTTCAAGCGGT  49 18
        fliO NONE
CXD91_RS07230 NONE
CXD91_RS07225 1491442 .. 1491457 -  -5.4  -2.78712   TGGTGAACGCAATCA              TGG-CGC GGC GCGGCCA              GGCGCGTTCAGGACA  45 33
        fliR 1490508 .. 1490526 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 153
        flgA 1472242 .. 1472257 -  -5.4  -2.79004   GGATCTTCAAAATAT              TCTCCGC TGC GCGG-GA              CCGGCCCGATGGGGG  45 131
        flgM NONE
CXD91_RS07130 1471364 .. 1471380 -  -9.3  -3.01712   CGGGCGCGCGCAAGA              CGCCCGC GCG GCTGGCG              CCCGCGGCCTTGATG  57 91
CXD91_RS07110 1464333 .. 1464387 -  -7.7  -5.35365   AAAACATAAGAAAAA GCAATATAC-CCGGGAGCCTGTCCCC GAAC GGGGACTGGCTCCCGCTGACTTCTAC TTGCCAGCGCCCCAG 100 102
CXD91_RS07105 NONE
CXD91_RS07100 NONE
CXD91_RS07095 1461870 .. 1461880 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS07090 1460711 .. 1460742 -  -5.7  -3.30214   AATCGACTACATCAA      CGGCGCCATCC-CC AGGCA GGCGGCCCGCGCCG      GCATCCAGGCCCCGG  52 149
        leuD NONE
CXD91_RS07060 1454033 .. 1454043 -  -8.2  -2.57132   GCGGTGGCCTACAAG                 GGCG CGG CGCC                 GGCGCTGGTGGCGCT  51 446
CXD91_RS07030 1447050 .. 1447060 -  -2.4  -3.68351   GGGCCATGATCGAAA                 CGCC GCT GGCC                 ATCCTCAATATCGGC  53 513
CXD91_RS07015 NONE
CXD91_RS07010 1441289 .. 1441321 -  -5.4   -3.4072   CATCCGCGACGACAA     CGC-GCTGACCGCCC GCCT GGGCGCCCGGCTGCA      GGGCGAGTACGCGGC  52 281
CXD91_RS06985 NONE
        clsB 1434969 .. 1435015 -  -9.8  -3.19602   CCTGGTACAGCAATA CCCCGACGACGGCCAGGCCGAC GAT GCCGGCCAGCCAGGCGCCCAGG CGGCGCCGGCGGTGT  62 60
CXD91_RS06960 NONE
CXD91_RS06955 NONE
CXD91_RS06950 1430795 .. 1430817 -  -8.3  -2.87132   GCTGTCGTCCACATA           GCGCAGCGC GGCGG GCGCCGCGG           GGCTCACGAGCGGCG  54 29
        treS NONE
        glgB NONE
        glgX NONE
        treZ 1417379 .. 1417430 - -10.5  -3.04144   CGGGCACGCGCAACA TCCCGCCGGCGCGCGCGGTCAGC ATGGCG GGAGGCCGGGCGCGCCAGCGCGC CAGGGTGTCGGCGGT  60 188
        treY 1413500 .. 1413539 - -15.6  -3.14132   GCTGCCCGGCATGAA  CGGCCAC-GCGCTGGCGCA GGC CGCGCGGGCGCTGCGGCCG  GCCCTGCGCATCATT  78 169
        ptsJ 1407517 .. 1407533 -  -4.3  -3.09908   CGTTCGGAAAATAAC              CGCCCCA TTA TGGGAAG              TCGCCTGGTTGATGT  47 55
CXD91_RS06885 1406847 .. 1406857 -  -5.4  -3.03798   AGGGCGAGAAAGAAT                 GTGA GGC TCAC                 CCGGCCGATGGGCAG  47 186
CXD91_RS06880 NONE
CXD91_RS06875 NONE
CXD91_RS06870 1404616 .. 1404637 -  -9.4  -3.01712   CCTGTCGGTGGAACA           GGCCG-GCC GCCAT GGCGCGGCC           CAGGCGGCGGTGCGG  57 396
CXD91_RS06855 1402993 .. 1403015 - -20.6  -5.41746   AAGCGTCCAAAAAAA           CAGGGCCGCC CGA GGCGGCCCTG           CGATCGCGGCGCGGC 100 51
CXD91_RS06850 1402158 .. 1402180 - -10.5  -3.34398   CGCGGCGCGGAAACA           TCGCCGGCG CGCGC CGCCGTCGA           ATTGGGCGCGGTCAC  63 273
CXD91_RS06845 NONE
CXD91_RS06840 1400653 .. 1400675 -  -3.3  -3.24747   GCGTGACATGATGAA           CTCCGGG TGGGCAGGG CCCGGCG           AGGCGGGCCGATGCC  46 89
CXD91_RS06835 1399679 .. 1399729 -  -5.6  -3.42996   CACCATCTACCACAA CCCGCGT--TGCAGCACGTCGC-GCA ACG TGCTGCAA-ATGCTGCGCGACGCGGG CATCGAGCCCACCAT  52 403
CXD91_RS06810 1394829 .. 1394842 -  -2.3  -2.62184   GTGCGCGTCAGACCA               GCTTG AGGT CGAGC                GGACGCGCGCCCGGA  38 4
CXD91_RS06805 NONE
CXD91_RS06800 NONE
CXD91_RS06795 NONE
CXD91_RS06790 1392669 .. 1392681 -  -2.6  -2.78384   GTGCGGTTCATGACA                GCGC CCTCT GCAC                GACCACGGCCACCGC  38 5
CXD91_RS06785 1391896 .. 1391912 -  -4.4  -3.10641   GAAGGCATCAGGGAA             CGAG-GG CGGT CCACTCG              GGGCTGGAGAATTTT  47 1
CXD91_RS06780 1390978 .. 1391016 - -10.4  -3.53012   CCGGCGCGCGGCAAA  GGCG-CGAACAACG-GGC CTTGC GCCGCGTTGTTCGGCGGC  GCCCGCCGCCGGCGC  67 41
CXD91_RS06775 1390367 .. 1390379 -  -4.7  -3.02739   GGGAACGGATACAGA                CGGGC CGC GCGCG                GCGTCCGTGGCGACA  45 82
         psd 1389329 .. 1389385 -  -2.2  -2.74192   CAGTGCGGAAGACGA CATGAGAGCTCCAGAAACGGCGGC GATGGCCAG GCCGCAATCTAGCAAGCCCTCATG TATCGATAAAGCGAA  38 56
CXD91_RS06765 1387719 .. 1387751 -  -5.6  -4.31837   AAGAAACTGAAGAAA     GGCGATGCCATCCCGC AGG GCGCGAC--CATCGCC     GTGCCCAACGACCCG  69 461
CXD91_RS06745 1385454 .. 1385511 - -12.5   -3.3514   ATTGACAGTTCACAA CTAGCGGATACTGCGTGCGCAGGGCGCG CTG CCCGCCCAGCG-ACGCGGTCAGCGCCAG CACGACGGGCATGGC  73 193
CXD91_RS06725 1382131 .. 1382164 -  -4.5  -3.84451   CCGCCGAAATCGAAA     TGGTCGAGACACT-GG GCT CCGAGCAACTCGTCCA     TGGCCGCTGCGGCAA  60 296
CXD91_RS06700 1376900 .. 1376920 -  -5.3  -2.53263   GCGACGCCGAACTCA            TCGGCCGAA CTC CTCGGCCAG            CTCGCGCGACCGGCG  44 2
CXD91_RS06695 1376231 .. 1376241 -  -3.2  -3.53811   GGGACCCCGTCGAAA                 TGCG TGA CACA                 TGACGCCGTGAATTG  49 103
CXD91_RS06690 NONE
CXD91_RS06685 NONE
CXD91_RS06680 1373801 .. 1373837 -   -13  -2.71791   ACTCGTGCTCCAAAT    GGCTCCGGCTCCGG TAGTGCGAC CCGGAGCCGGAAAC    CTGGGCGTACGTTGA  67 72
        livH NONE
        livM NONE
CXD91_RS06665 NONE
CXD91_RS06660 1369899 .. 1369909 -  -8.2  -3.60098   ATCGCCCACCTGAAA                 GCGC GCG GCGC                 CGATGCCGTGGTGCT  63 267
CXD91_RS06645 1367744 .. 1367782 -  -4.4  -3.53012   TCGGCCGCGGCGAAA   GCATGCTGACCACGATGT TCT ACATCGTGGCAGGCCAAC   TGGTGTGCAGCGCCG  52 338
CXD91_RS06635 NONE
        trxA 1359559 .. 1359600 -  -2.1  -4.06864   GGGAGATAAGAAGAA GGGTTCGGGCGGCGGGCC ACGGACG GGCCCGC-GCGGGAATCA GGGGGGAATGCGCGG  58 66
         rho 1358226 .. 1358243 - -14.1  -4.54727   GCCCGCAAAGCAAAA             CCCCGGC GCGG GCCGGGG              GTCGGGACGGGCGTG 100 54
CXD91_RS06595 1351648 .. 1351660 -  -4.7  -4.09243   GACATGGCGTGAAAA                GCGGC TTT GCAGC                GGGGAAAAACCGTTA  62 38
CXD91_RS06590 1350800 .. 1350812 -  -6.2  -4.11501   CCAAATACAAGGAAA                CCGC GCGCG GCGG                GTTGGCGGTGAATAT  69 191
CXD91_RS06580 1347425 .. 1347464 - -11.5  -3.05384   GTGCGGGCCATGGAA GCG-CGCCTGCAGCAGGGCG GCG CGCCC-GCC-CAGGCATCGC GCATCGTGGTGTATC  62 181
CXD91_RS06560 1342259 .. 1342292 -  -5.2  -3.14963   GGCATAACGAGTGAA     GCGCTGGACTGCGA ATTGCG TGGCAGTCTAGGGC      CTGGCCGGCGCCGTG  49 133
CXD91_RS06555 NONE
CXD91_RS06550 1341045 .. 1341055 -  -4.6  -4.07568   CGCTTCGCGCGAAAA                 CGCG TAA CGCA                 CGTGCCGGCCGCCTC  62 92
CXD91_RS06505 1329437 .. 1329460 - -11.7   -4.8622   CGCGCCAATGAAAAA          GGCCCGGCA GCGATG TGCCAGGCC           TTGATCAACGATTTG 100 39
CXD91_RS06495 1326788 .. 1326804 -  -5.7  -2.64472   GATGTCGGAAATCCA              GGCGGCC TAT GACCGCG              GCATCCTGCGCATCA  45 268
CXD91_RS06485 1325177 .. 1325187 -  -5.4  -5.69473   GATATCAGAAAAAAA                 TCTC GAT GAGA                 AATGGGGGACGTGCA 100 300
CXD91_RS06475 1324992 .. 1325013 - -17.3   -4.8622   GCGCCCAAGCAAAAA           GGGCAGCCC GGAT GGGCTGCCC            TTTTTTTCTGGTGCC 100 34
CXD91_RS06455 1322046 .. 1322060 -  -4.2  -2.73124   GTTTAGGGTTGAAAT               GACTGG CTC CTAGTC               TAACGAACTGCCCGG  41 71
        kynB NONE
        kynA 1320345 .. 1320381 -  -3.5  -3.40403   CTTCTTTCATGATAA    TTTCCCAGGTTAGCGGG TCG CCAGCCAGGCCGGGCAA    GCAGCCCGGCGCACG  49 152
CXD91_RS06440 1320025 .. 1320040 - -10.4  -5.86061   CGCGAGGAAAAAAAA              GCAGCC CGCA GGCTGC               TTTCTGGTGCGCCTC 100 58
CXD91_RS06435 NONE
CXD91_RS06430 1316679 .. 1316696 -  -6.9   -3.9777   GCCAAGAGCGAGAAA             CACGCCA AGAG CGGCGCG              CATCACGGTGCCCAC  66 147
CXD91_RS06410 1312363 .. 1312379 -  -9.3  -2.73364   CCGTCACCGTAATCA              GCGCGCC GCC GGCGTGC              CCAGGCTGGCGGCCA  55 6
CXD91_RS06405 1311504 .. 1311538 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS06395 1309662 .. 1309694 -   -17  -3.01791   ATTCGGCCGCCAAGA     GCGCCCTGGT-CGGG TGCA CCCGCACCTGGGCGC      TGGAACTGGCCGAGT  82 290
        hpnC NONE
        hpnD NONE
CXD91_RS06370 1304361 .. 1304373 -  -4.7  -2.93073   CCGGCTCAAGAACCA                CGTCG CGA CGCCG                GCCTGAGGAGTCTTC  44 450
CXD91_RS06345 1301237 .. 1301247 -  -3.2  -3.45366   CGGTCAATGAATGAA                 TAGC AGT GCCA                 GCACGACCGGGATGA  48 3
CXD91_RS06340 NONE
CXD91_RS06335 NONE
CXD91_RS06330 NONE
CXD91_RS06325 1297270 .. 1297298 -  -6.6  -3.28712   CGCGGTGCGCGACAA       GC-TGGCCCAGGC GTTC GCCCAGGCCGTGC        GCGATCCGGCCACGG  52 184
CXD91_RS06310 1293439 .. 1293451 -  -4.7  -2.72344   CGGGATGTGCAAGCA                GGCGG CTG CGGCC                GGGGAGATTGTCCAT  43 499
CXD91_RS06290 1290246 .. 1290270 - -13.6  -3.30771   CGACATCCGGCACAA         GGTGCGGCTCG ATGG CG-GCCGCACC          GAACTGGCCGTAGGG  74 251
CXD91_RS06260 NONE
CXD91_RS06255 1279694 .. 1279725 -  -2.7  -3.14931   GGCAGCCCGCATGAA      TCCGGCGGGCCAC GAGGTA GAGGTCCGCCCGC       AGGGCTGGCGGTTCG  43 364
CXD91_RS06220 1276247 .. 1276270 -   -16  -3.21416   GAGCGCTACCAGGAA          GCGCTGCGCGC CTG GCGCGC-GCGC          CATCCCGAGGCGGCA  80 66
CXD91_RS06200 NONE
CXD91_RS06195 1272634 .. 1272661 -   -14  -4.56597   TTGGTTGTCGAAAAA        GCCGCGGCGGGC GCGG GCCCGCCGCCGA         TCGGGTTGCGCTCAG 100 37
CXD91_RS06190 1271711 .. 1271750 - -11.5   -2.9162   GAACTCCGGAAACGA CTG-CACGGCG-GCGCC TTGGTGGG GGCGCACGCCGCGGCAG  GATGGCGCGCCAAGG  63 69
CXD91_RS06185 NONE
CXD91_RS06180 NONE
CXD91_RS06175 1269490 .. 1269522 -  -5.3   -2.9296   GAAAGCCCAACCATA      CCATCGCCCCACGGC GCC GCCGCCATGCGCCGG      TTCATGGCGCCGCGG  46 65
CXD91_RS06170 1268192 .. 1268239 - -14.1  -3.61517   ACCTGTGTCGAATAA CGCACGGGCCGCCGGCGCACGCG CGGG CGCGCGCGCCAT-GGCC-GCGCA AGGCGGCCGCGGTGC  78 300
CXD91_RS06165 1267263 .. 1267277 -    -7  -2.85668   TATCCGCATACCATA               GCGCCG CGC CGGCTC               GTTGCCAAGGCATCC  50 53
CXD91_RS06150 1263983 .. 1264003 - -10.3   -3.6502   CACCTCCTAGGGAAA            CCGGCGGCG GAT CGCCGCCCA            CGGAAAAGTCTAGCA  70 70
CXD91_RS06145 1263451 .. 1263474 -  -7.4  -3.06302   AGGACCTGCAGGGAA          TGCCGC-CCGC GGC GCAACGCGGCA          GCCCGGCCGTGGGCC  52 162
CXD91_RS06115 1257388 .. 1257410 -  -6.8  -3.29144   CGACCGCCGCTACAA           CGGCCTGGCC CTC GACGCGGCCG           AAGGCGAACGCATCG  52 305
CXD91_RS06105 1255378 .. 1255396 - -10.2  -3.44051   GTTCCACTACGAGAA             GGCGCGCA TGA TGGGCGCC             AAGCCTGCGGCCCCC  65 297
CXD91_RS06075 NONE
CXD91_RS06070 NONE
CXD91_RS06065 1246842 .. 1246891 -  -8.4   -3.9392   CTCCAGTGTAAACAA CCCGCCTGCCGCGCCGCGCTGGCGC TCA GCGCCCG-GCGGCGC-GC-GTCCCG CCGTACAGGCGCAGC  70 1
CXD91_RS06060 1246149 .. 1246183 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        bamD 1235126 .. 1235154 - -21.1  -4.08064   AACGGCCGCGCAAAA        GGAAAACCCGGCC TGG GGCCGGGCTTTCC        TTGGACTGCGCGAGT 100 45
CXD91_RS05990 1230454 .. 1230490 - -27.4  -2.71364   GGATCGGGGCAACGA   CGCAGGCGCCGCACCCG ATGA CGGG-GCGGCGCCTGCG    TTGCGATCAGCGCTT 100 32
CXD91_RS05965 NONE
CXD91_RS05960 1225746 .. 1225756 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 91
CXD91_RS05955 1224238 .. 1224256 -  -8.9  -3.28924   CACGGTGGCCGACAA             GGAAAGC GCGCT GCTTTCC             GGCCAGATCGATACC  59 511
CXD91_RS05945 1222629 .. 1222646 -  -2.5  -3.58343   TCGAGCATCGCGAAA             TCCGCGC CCAG GCGCTGG              CCGGCTCGGTCGTGT  50 376
        mdeB 1210248 .. 1210285 - -20.6  -3.06796   CTGCACCGCAGCGAA   GACGGCATCGGCCGGG CCACGT CCCGGCCGATGCGGCC    GTCACGACTGCCAGG 100 27
CXD91_RS05905 1207686 .. 1207703 -    -4  -3.04144   TTTGCATGGGTAACA             CGGGCG TCTTGG CGCCAG              AAGAGTTATGGAGCC  44 172
CXD91_RS05900 1207009 .. 1207019 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS05890 1205637 .. 1205667 -  -6.8  -3.65046   CCTGTACGGCAAGAA      GCGCCTGCGC-GA AATCGA CCGGCGCATGCGC       TTCCTGACCAAGCGC  57 363
CXD91_RS05830 NONE
        recJ 1186073 .. 1186084 -  -7.2  -3.65812   CGGTTTGTAACAGAA                GGGC GGCG GCCC                 TCAGGCGGCGTGCTC  61 26
CXD91_RS05820 NONE
CXD91_RS05815 NONE
        lysS NONE
CXD91_RS05805 NONE
CXD91_RS05760 1170763 .. 1170781 -    -8  -3.53012   CCTCCTTGCTGCAAA             GCGGCGGC GAT GCCGTCAC             GCGGCAGATGCTGGC  58 170
CXD91_RS05740 1166858 .. 1166878 -  -2.5  -3.31144   CCTTGACGCGCAGAA            TCTCGCTGA CTT TCAACATGA            TGTTCCTCCCGGGGC  44 60
CXD91_RS05735 1166359 .. 1166369 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 74
CXD91_RS05730 1165136 .. 1165161 - -16.9  -3.12595   TGCAATGATGCAATA         CGCCGCGACGCA GAT TGCG-CGCGGCG         TGCCGCTGCGCGTGA  80 219
CXD91_RS05720 NONE
CXD91_RS05715 1162016 .. 1162026 -  -4.6  -3.30124   CGCTATCGCGCAGAA                 CGCC ATC AGCG                 GGCCGAACGCCTGGC  49 374
CXD91_RS05690 1159174 .. 1159189 -  -4.6  -2.57132   GCGCCGCTGGATAAG              GGGTGG ATGG CCAGCC               AACCGTTACAAGTTG  42 53
CXD91_RS05685 1157080 .. 1157096 -  -2.2   -2.8372   TATTTGCCATGAAAC              CTTAGC AGCAG GCTCAG              ACCGCGGCCGCCGTA  40 22
        folP NONE
CXD91_RS05675 1154835 .. 1154854 - -16.4  -5.06414   CCCGCGCAACAAAAA            GGCCCGCC ATCA GGCGGGCC             TTCGGGCAGGTCCGG 100 48
CXD91_RS05670 1153706 .. 1153733 - -21.4  -3.48276   CCTGCCCCGATACAA        GGTGCCTGTCCC CGCG GGGACAGGCACC         CCAGCACCCCGTCGG 100 154
        ppk1 1149784 .. 1149803 -   -15  -5.09259   TATTTCAAAATAAAA            TGGCCGCC CGCG GGCGGCCA             GGCGGCAGCGGGCCG 100 43
        pstS 1148522 .. 1148543 - -10.1  -2.52464   CGCCCCGCGAAGTCA           GGACGGCGA TCGC TCGCCGTTC            ACTGGTCCGGCCAGG  56 68
        pstC NONE
        pstA NONE
        pstB 1145717 .. 1145751 -  -7.7  -3.49858   GCAACTATACCAGAA    TCGGCC-CGCCGGCCG GCCT CAGCCGAAGCGGCCGG     TGATGTAGTCTTCCG  60 9
CXD91_RS05635 1145484 .. 1145524 - -11.2  -3.86346   GCACGCCCGCAGAAA CGCGAAAGCCCCGAC-CGG AAAT CCGTATCGGGGCTTTGACA  TGCATGGAGCGGCTA  77 119
CXD91_RS05630 1144300 .. 1144338 -  -3.8  -3.32844   GTTCGCACGCGAGAA  CGGCCGG-GTGTTCG CCTATGTCAT CGAGCACGCCGGGCG   GCACCCCGACCCCGA  47 104
CXD91_RS05605 1137919 .. 1137929 -  -8.2  -3.53091   ACCCGTTTGCCGAAA                 GCCC GGT GGGC                 GCGCAAGGGCTGATG  61 336
CXD91_RS05590 NONE
        cobA 1131851 .. 1131891 - -14.7  -3.32498   TACGGTACACACCAA CGGCATCGCGCACCGCAC CGAACT GCGCGGCACGCG-CGCCG  AACTGGGCCTGGGCA  79 220
        queA NONE
CXD91_RS05535 1123029 .. 1123055 - -12.3  -2.70932   GGCGCGGCGCAACGA        GGGCCGCGCCGCC GGG GG-GGC-CGGCCC        TAGTCGACCCCGCGC  65 25
        yajC 1122537 .. 1122555 - -17.4  -3.65046   GGGTGAGCGGAACAA             GGCCCCGC CAC GCGGGGCC             TTGTGTGACCTTACA  91 36
        secD 1120565 .. 1120590 -  -2.5     -3.37   TGAATCCGGAAAAAT         TCCATGTTTCGC CTT GCGTATCA-GGA         CGGCGGGCGGCAGGG  46 54
        secF 1119582 .. 1119611 - -22.2  -5.81412   TGCATGTAAAAAAAA       CCCTGCCCGGCC GCATTT GGCCGGGCAGGG        TTTTTTACTACCGGG 100 48
CXD91_RS05515 1117884 .. 1117907 -    -8  -3.61398   CTGGGTGCTCAAGAA          CGTCGTGGCG CGCG CGCCCCGAAG           TGCTGCTTGACGACG  60 403
        miaB NONE
CXD91_RS05500 NONE
        ybeY 1114385 .. 1114420 -  -5.3  -3.31905   ATTTTGCATACAACA    GCGGCCATTGTTCCCC GATTT GGGGCGCATTGGC-GC    CAATCTGCGCGGCGC  51 43
CXD91_RS05490 NONE
CXD91_RS05485 1111316 .. 1111355 -    -5  -3.53444   CCATCCGCCGCGAAA GCGCCGCGGACCTGCTGC CCTGGT GC-GCAAG-CCACGACAC  CGGCGTCATCGTCTA  52 440
CXD91_RS05475 NONE
CXD91_RS05470 1110241 .. 1110254 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CGTAACTTCTACACC  51 54
CXD91_RS05465 1110135 .. 1110156 - -14.5   -5.7946   CCGGGAAGAAAAAAA           GCCAGTTGC TTAC GCAACTGGC            TTTTCGGAATTTTTT 100 40
CXD91_RS05460 1108690 .. 1108709 -  -4.8  -3.28712   GGTGCTGCTGGACAA            CGTGCCGC AGGA GCGCCGCG             ACGAAGCCAATTCGC  49 235
CXD91_RS05395 1096497 .. 1096531 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 493
CXD91_RS05385 1095246 .. 1095258 -  -4.7  -2.90496   GCCCGCGGGAAATCA                GCGGC GGT GCTGC                GGCGGACGGCTGGGC  44 10
CXD91_RS05380 1094816 .. 1094843 - -11.2  -2.75074   TGCACTGGAACATCA        GCCTGAACGACG CGCG CGTCGATCCGGC         CATCTTCATCGGGGC  59 70
CXD91_RS05340 NONE
CXD91_RS05335 1087593 .. 1087603 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 238
CXD91_RS05330 1086370 .. 1086387 -    -4  -3.60805   ACAGCGTAGCGCAAA             CCGGGC CGTCCT GCCCGC              CGGCGTGGCGCGCGG  51 44
CXD91_RS05325 1085617 .. 1085638 -  -8.1  -3.64599   CTATTACACCGCAAA           CGA-TGTTGC GGT GCAACATTCG           TGTGACCGGGGCGCC  63 48
CXD91_RS05320 NONE
CXD91_RS05315 NONE
CXD91_RS05310 NONE
        fabI 1079781 .. 1079792 -  -7.2  -3.33483   GATCGAAATCATGAA                GCGC CGCG GCGC                 CGAGGTGCCGATTCC  55 470
CXD91_RS05285 1074852 .. 1074862 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS05280 1073828 .. 1073841 -  -3.1   -4.2074   CTCCCAAGAGAGAAA               GGCTT CTTC AAACC                GGGCAGCTAGTTGTG  63 32
CXD91_RS05275 1072550 .. 1072576 -   -13  -4.65895   CGCCGGACGCAAAAA        CGCCCGG-CGC GGTGAG GCGGCCGGGCG         TACGTACTGCCATGG 100 79
CXD91_RS05255 NONE
CXD91_RS05250 NONE
        folD NONE
CXD91_RS05240 1060478 .. 1060513 -   -19  -2.59431   GGCGTCCAGAAGTCA    GCAGGTGCCAGTCCCC CTGC GGGGACAGGCACCTGA     GAGGTCAGGCTTGCA  87 30
CXD91_RS05235 1059693 .. 1059710 - -14.1    -3.965   GCGCAAAAGCAACAA             CCGCGCC CTGG GGCGCGG              TCCGGATCATTGGGT  84 32
CXD91_RS05230 1059271 .. 1059301 - -25.6  -4.07568   CGCGGCCGTCCAAAA       CAGACAGGCCGGCA AGA TGCCGGCCTGTCTG       TTTGCGCAGTGGCGA 100 44
CXD91_RS05210 1052781 .. 1052810 -  -4.3   -4.1822   CGCGAGGGCAAGAAA       CGCCAGATTCGC CGCATGT GCGAA-CTGGTG       GGGCTGCGGGTGGTG  63 182
CXD91_RS05200 1051540 .. 1051568 - -10.2  -4.07885   GATTCTGCGTCAAAA       CCGCCG-GCGGCG TCAG CGCGGCGCGACGG        GCGCGCGCGCCAGCG  78 9
CXD91_RS05190 1048802 .. 1048818 -  -2.2  -4.42238   GCAGTTGAAGGAAAA              CATCGA GAGCG TCGAGG              TCACCCTGTCGGACG  68 234
CXD91_RS05180 1046364 .. 1046375 -  -7.2  -3.78953   AGGCCCAGGAGGAAA                CCGG CCTG CCGG                 TGCAGCAAGTGGAAG  64 435
CXD91_RS05165 1043762 .. 1043782 -  -8.1  -3.01712   CGTGGTCCGCGAAGA            GCCGGGGCC TCG GGGCCCGCC            GGCTTCAACACCAGG  53 438
        mltB 1028128 .. 1028140 -  -4.7  -3.57144   CCGGGCATCCGCAAA                TGGCC CGA GGCCT                ACATGCCGAAGATCT  54 322
CXD91_RS05010 1010871 .. 1010891 - -18.3   -5.4505   CGCGGCAAGAAAAAA            GGGCCTCGC TAT GCGAGGCCC            CCTCATTGTAGCGGC 100 52
        ubiG NONE
CXD91_RS05000 1009337 .. 1009359 -  -2.7  -2.77899   TGGGTGGAGCAATCA          GTGGCCGG GTGTGGCG CCGGC-AC           GGGCATGGGGCCCGC  40 59
CXD91_RS04995 NONE
        ssrA 1007513 .. 1007535 - -13.6  -5.85178   AACAGCCAAAAAAAA           TAGCCAACTT TTG AAGTTGGCTA           TTAGGTAAATACTTG 100 57
CXD91_RS04985 1007240 .. 1007268 -  -6.9  -3.02471   TGTGTACTATACACA        CTTTTAATGTGTA TAG TACACATTAACAA        ACTATTTTGCCCCGC  51 19
CXD91_RS04980 1007011 .. 1007037 -  -7.9  -2.84298   GACAGTTCACAACTA         GCAGGCCCCGA TTGCT TCGGGGCTTGT         GTCTCACTTCAAACC  52 29
CXD91_RS04965 1005472 .. 1005509 - -11.3   -3.6682   TGCTACCCACGCAAA   CGAGAGCCCCGATACGGA TTG TCCAG-TCGGGGCTCTCT   GCTGGGTGCGTCGGA  73 55
CXD91_RS04955 1003052 .. 1003086 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS04940 1000494 .. 1000527 - -13.1   -3.0497   AGAGTATCTGGAATA     CCGACGCGCTGCGCGC CAT GCGCGAAGCG-GTCGT     GTACGGAGTGCCGTC  70 111
CXD91_RS04930  997980 ..  997990 -  -2.4  -3.02381   GCAGAACACCATAGA                 CCGG CAT CTGG                 GGGAATTGGTTTCCG  41 119
CXD91_RS04925 NONE
CXD91_RS04915 NONE
CXD91_RS04910  992938 ..  992969 -  -5.6  -3.14132   CGTGGGGGCGAGCAA      GCCGCGCCACCTGG AGGA CGCGGTGGCGGCGC       TGGCCCTGCGCCTGA  47 102
CXD91_RS04895  989201 ..  989220 -  -2.8  -3.53761   CAAGGGGCGGCGAAA            GCG-CGC ATCTTGG GCGTCGC            GGGGGCGCTTGTCAA  49 37
CXD91_RS04890  988594 ..  988628 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGACTTACGC  48 191
CXD91_RS04790  968103 ..  968114 -  -5.8  -3.53811   TCGATCTGCCCGAAA                CCCT GACC AGGG                 TGCAGCGGCGCGATA  57 414
CXD91_RS04780  966568 ..  966615 -  -4.1  -2.71712   GCGCGGCGCCGAAAT CGCTACACTGGACGTACGGGCGCG CGC CG-GCGCAT-CGGCC-GCGCAGCG CCCAAGGAGGCGATC  41 220
CXD91_RS04760  963192 ..  963226 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS04745  959573 ..  959588 -  -3.2  -2.87132   TGGCCTCCTTACAGA              TCCTCG GAAC CGAGCA               GCATCTCGGTCAGCC  41 3
        ilvN  959038 ..  959065 -  -8.2  -2.55074   GTGAATGCTAATGCA        GGGTGGCGCGCC GCCA GGCGCGCCGGTC         AGATTTTCAGTATCC  52 24
        ilvC  957908 ..  957925 - -14.1  -5.79595   GCGGAAAAGAAAAAA             CGCGCCC CGTG GGGCGCG              TCTGGACCAGCCTGC 100 75
        pssA  956841 ..  956854 -  -8.1  -3.27022   GCCAGCCGAGATCAA               GCAGG TCGG CCTGC                CCAGCGTGCGCCAGG  56 199
CXD91_RS04720  956251 ..  956274 -  -4.5  -3.63367   GGTTTCAAGAAAAAC          GAGC-CCCGA GACAA CCGGGCGCCC          TGTTACGCTGTTGCC  55 28
CXD91_RS04715  955855 ..  955890 - -16.8  -5.04601   CTTACAAATGAAAAA    CCGTGGCCGTTGCGAC ATGC GTCGCCCCGACCACGG     TTGCGTCATGGGGAG 100 54
         pnp  953627 ..  953644 - -14.1  -4.66163   ATGCGGACGCAAAAA             CGGCGCC CGCG GGCGCCG              TTCTTGCGTCAGGAA 100 50
CXD91_RS04705  952629 ..  952663 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS04695  950190 ..  950213 -  -3.7  -3.73775   CGCAGCCTTACGAAA          CGGGGCTGC GCTACA GCGACCCCA           AGGATTTCCATGTGA  55 336
CXD91_RS04680  948263 ..  948295 -   -14  -4.66318   ACCAGGGCAAGAAAA      TCCGGGCGCACCGG GCGAT CCGGCGCGCCCGCC      GTCCGGCTGGCGCTA 100 38
CXD91_RS04675  947403 ..  947415 -  -5.5  -3.02074   CAAAGACATTACAGA                CTCCG GAA CGGAA                ACTTAAGCTGCGGCG  47 28
        secG  946911 ..  946940 -    -3  -4.09685   CGGCATCCTGCAAAA      CTTCGACCAGGATC CGAA GATCCTGG--AAAG       TCGGGCATTCTAGCA  59 35
CXD91_RS04665  946729 ..  946754 - -13.3  -4.91109   CCTGGACGACAAAAA         GCCCATAGGCG CTGA CGCATATGGGC          TTTTTTGCTGGCTTT 100 86
CXD91_RS04660  943808 ..  943833 -  -2.4  -3.58343   CGGAGCATCGGGAAA         CCGAACTGGC GCAACT GCTGGTCCGG          GAGGCCGGGGCCCTG  50 123
CXD91_RS04650  941570 ..  941608 - -12.4  -3.87994   AGTGATGCCGACAAA  CCGCCCGCGCCGT-GCG GACGGA CGCTACGCCGCGGACAG   GCGCGTCCGATAGGA  81 11
CXD91_RS04645 NONE
CXD91_RS04640  938596 ..  938606 -  -2.4  -3.35679   CGGCCCGATCGAGAA                 TCGC TTC GCGC                 AGGGCCAGCACCGAC  46 494
CXD91_RS04630  936399 ..  936427 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGTGCGGTGG  56 91
CXD91_RS04625  934917 ..  934931 -  -5.6  -3.53091   AGGCGTGCGGCCAAA               GCATCG AAG CGCTGC               GCGAGGAACAGCAGC  52 374
        metC NONE
CXD91_RS04605  930802 ..  930860 - -18.7  -4.56597   TTCTTCGTTGAAAAA GGCCACGCGCCGCGGGCGCGGGCCGAACG CAA CCACCGGCGC-CGCCCGCGGCGC-CGGAC CTGCTCGAATCGGAA 100 66
CXD91_RS04600 NONE
CXD91_RS04595  927704 ..  927716 -  -3.3  -3.63627   CGTTCAGATGCGAAA                CGCCA CGG TGGGG                TCGGACCGGACCTTG  53 1
CXD91_RS04570  920294 ..  920318 -  -5.6  -4.00042   CGCGCCATCAAACAA         TGCGGC-CGGC CCGC GCCATGCCGCG          CAACCCATGCTGCAA  63 63
         azu  919583 ..  919604 - -11.5  -2.62184   TGTTTCGCGAGATCA           TCGGCCCGC AGGC GCGGGTCGA            GCGGGCCGAGCACAT  59 142
CXD91_RS04535 NONE
CXD91_RS04530 NONE
CXD91_RS04525  908489 ..  908502 -  -3.7  -4.35461   TCAAGACGATGAAAA               GGGGC TCGC GCCCG                CTCAGGCCGCCGCGT  68 59
CXD91_RS04520  907561 ..  907583 -  -3.3  -3.38046   TGGGTATCCGAAATA           TGCAGCACG CGCAT CATGCCGCC           TCCAGCCGCTGGCCA  48 16
CXD91_RS04515  906739 ..  906753 -  -9.2  -3.14795   AAAGGTTCACGAACA               GCGGCA TCG CGCCGC               GGCGCGCGTCATCCG  59 34
CXD91_RS04510  905745 ..  905760 -    -6  -2.66326   TGAACGGGAAATCGA              CCGCAC CCTG GAGCGG               TTCAGCGACGGCAAG  45 207
CXD91_RS04480  902003 ..  902038 - -26.4  -4.24326   AAACATGATTCAAAA    GCGAAAAAAGCCGCCC CGAA GGGCGGCTTTTTTCGC     GCGGGCACGAGGCCC 100 86
CXD91_RS04475 NONE
CXD91_RS04470  901016 ..  901032 -    -5  -3.05384   GGCGGCGCGATCGAA              CCGCGC CGCCC GCGCCG              GTGGTTCAGCGCGCA  45 31
CXD91_RS04465 NONE
CXD91_RS04460 NONE
        nuoE NONE
        nuoF NONE
CXD91_RS04445 NONE
        nuoH NONE
        nuoI NONE
CXD91_RS04430 NONE
        nuoK NONE
CXD91_RS04420 NONE
CXD91_RS04415 NONE
        nuoN NONE
CXD91_RS04405  886870 ..  886886 - -13.7  -5.78622   GTAGGCGAAAAAAAA              CCGCCTC ATG GAGGCGG              TATCGCTGAAGCGGC 100 50
CXD91_RS04400  884332 ..  884352 - -11.8  -4.98531   GCCGGAAATGAAAAA            CGGCCCCC TTGCG GGAGGCCG            TCGGAACGGCGGGGT 100 52
CXD91_RS04395  881857 ..  881873 - -15.1  -6.09133   CATGCCAAAAAAAAA              CCGGCGC AAT GCGCCGG              TTTTCCCTGCTGCGC 100 49
CXD91_RS04390  880996 ..  881025 - -10.6  -2.65808   ACCGCCAAGAACGCA       GTCGTCGGCCTG ACCCGG CAGGCCGCCGGC        GAAGTGGCCGAATTC  55 266
CXD91_RS04370  876480 ..  876509 - -23.7  -3.03006   AGTAAGCCACACATA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        ATGAACACTTGACGG 100 114
CXD91_RS04355 NONE
CXD91_RS04350  870875 ..  870885 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS04340  869826 ..  869857 -  -8.7  -3.61398   CCTGGGTTCGAAGAA      CGAGGTGG-AGCGC GTGGG GCGCTACCACGCCG      AAGCGCACGCCAGCT  62 39
CXD91_RS04325  865288 ..  865298 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS04320  864228 ..  864249 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CXD91_RS04315  863087 ..  863106 -  -4.4  -3.45571   GTGGGGAAATATCAA            TGTATACA TGAC TATATACA             TCAATGGATATCGGC  51 162
CXD91_RS04310 NONE
CXD91_RS04305 NONE
CXD91_RS04300 NONE
CXD91_RS04295 NONE
CXD91_RS04290 NONE
CXD91_RS04285 NONE
CXD91_RS04280 NONE
CXD91_RS04275  853795 ..  853835 -  -3.6  -3.65046   TTGTCATTGTAATAA  CTCCTGGCCGGGCGCCGG ACGGG CCGGCGGCGGGCGCCGCG  CGGCCCGCCGCTCGA  54 44
CXD91_RS04270  852913 ..  852926 -  -5.9  -2.78935   ATATCGGCCAGTATA               GCGGC GGCA ACCGC                GAGCACACGGGTTCG  46 86
CXD91_RS04255 NONE
CXD91_RS04250  848315 ..  848326 -  -5.8  -3.01712   GTGTTGGCTTGAACA                TGCC TCAG GGCA                 TGTAGAAGCCGCCGT  47 18
CXD91_RS04245 NONE
CXD91_RS04240  846155 ..  846166 -  -5.8  -3.93695   TTCACCAGCGAGAAA                GACC TGCG GGTC                 AATCCGCTGGCGCAA  63 522
CXD91_RS04180  830311 ..  830330 -  -4.3  -2.71144   TACGGCCGCGAAGGA            TCGCGCCA TGGCC TGGC-CGA            GTACATGCAGATCAA  40 84
CXD91_RS04145  820226 ..  820251 -  -8.9  -3.70902   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG  65 63
        rplU NONE
CXD91_RS04120  816713 ..  816734 - -17.3  -5.45802   GCCTGAAAACAAAAA           GCCCTGCCG CGTG CGGCAGGGC            TCGCCGTTCCGGGGA 100 53
        obgE NONE
CXD91_RS04110  814213 ..  814235 -  -4.1  -3.13073   ACGGTCAGGAATACA           GGACAAATC GGAGG GGCTTGTCC           GGCATGTTGGTTGGT  45 62
CXD91_RS04100  812487 ..  812521 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 310
CXD91_RS04085  811156 ..  811179 - -10.2  -4.41348   TCTCGCTGAAATAAA          GGCGCGCGCCC GGT GGG-GCGCGGC          AGGGGCATTATTCCA  88 56
CXD91_RS04080  808774 ..  808784 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 183
CXD91_RS04075  807708 ..  807752 - -10.6   -2.8294   TATGGTGCACAAGCA CCTCACGCGC-GCGCTA-CGGC ACT GCCGCTCCCGCTGCGCGCGTGG GAACACGGCGCCGAT  57 43
CXD91_RS04065  806043 ..  806073 -  -6.2  -4.27584   ATGTTTAACCGAAAA       GAGATTGAAAGTAA TTA CCACTACCAATCTC       TAAGACGGAACGGCC  70 135
CXD91_RS04060  803414 ..  803427 -  -3.7  -3.36803   CAAGGGCATCGACAA               GCCGG TGGT CCTGC                AGGCGCGCCGGAACG  47 217
CXD91_RS04035 NONE
CXD91_RS04030  796807 ..  796830 -    -3  -4.17556   GAGATCCGCAAGAAA          GTCGAACAGG CGCG CGTGTCCGGC           TACGCCGTCACCATC  61 285
CXD91_RS04020  794335 ..  794345 -  -6.8  -3.09516   CGCCGCAGGATGTAA                 CCGA ACA TCGG                 CCGCCCCTTGTGGAT  52 101
CXD91_RS04015 NONE
CXD91_RS04010 NONE
CXD91_RS04005 NONE
CXD91_RS04000  789420 ..  789430 -  -2.4  -4.41348   GGGCTGGGAAATAAA                 CGGG TTA CACG                 GGGTCCACCGGGACG  65 19
CXD91_RS03995  787792 ..  787831 -  -5.7  -3.54408   TCCCAGCGAAATGAA CTGCTCGGTCG-CGCTGTC GGCC GACAGCGACG-CCGAACTC  CTGGAAGCCGCGGTC  57 197
CXD91_RS03985  786426 ..  786436 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 121
CXD91_RS03980  785366 ..  785387 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CXD91_RS03970  784148 ..  784175 -  -6.2  -2.79188   CATCGAAGGCAACTA        CGCCAACG-GCCG CCG CGGCACGCTCACG        CCCGATCCGCTGGCG  46 163
        lptD NONE
CXD91_RS03945 NONE
        rsmA  776561 ..  776599 - -10.3  -3.01712   CGCTGCGCGGCAAGA  CCCCGGCCGGCG-TGGC CCGCATC GCCAGCGCCG-CCGGCG  TGCCGGTGGTGGCGC  59 254
         pyk  773642 ..  773675 -  -5.2  -3.61398   GGGCGCCTGGAAGAA     GGTGCCGGTCTACGA GACCT TCATCG-CCGGCGCC     AAGGACGGCTTCAAC  54 454
CXD91_RS03840 NONE
CXD91_RS03835  757408 ..  757445 -  -6.1  -2.66787   GCAACAGCGAGATGA   GCAGCGCCCGGGCCCACC AGC GGCGTGCGCG-ACGATGC   GCGCGAACGCTCAGC  46 36
CXD91_RS03825  756145 ..  756160 -  -6.2  -5.00616   TTGTGGCCCAAAAAA              CTGTAT GGAC ATACAG               TGTATGCGAGCATAG  86 294
CXD91_RS03810  755323 ..  755345 -  -7.6  -3.63991   GATGACGCTCAAGAA           TTGGCCGCCG CTG CGGCCGCTAA           TGCTGTTGGCGCTCG  60 278
CXD91_RS03690  738736 ..  738755 -  -4.2  -2.91274   CTCAGCTGAAGCATA            GCTCGGTGA AGG TCGCCG-GC            GGCTTCGGTCCGATC  43 161
CXD91_RS03645 NONE
CXD91_RS03640 NONE
CXD91_RS03635  730336 ..  730353 -  -3.3  -3.54424   GTTGACGCCCTGAAA             GCGTTCGC GCA GCGC-CGC             CGCTTCTTCCTCGAT  49 52
CXD91_RS03630  729252 ..  729267 -  -4.6  -3.01712   GGGGTCTCTGCAACA              CGTGCC CCAG GGCACT               GTTGGTTTTGCGCTG  45 47
CXD91_RS03625  728854 ..  728869 -  -3.2  -3.94438   CATGCTAACAAAATA              GCAAGC ATAT GCTTTC               TTCGGATGTCGGGTG  58 167
CXD91_RS03610  725641 ..  725664 -   -21  -2.60496   GGCGGCCTGAAACAG          GGCCGCCGCG CCAG CGCGGCGGCC           GCGCGCTTGCTTACC 100 36
CXD91_RS03575  719256 ..  719296 - -12.4  -2.73875   TTCCTCGGAATACGA CCCTGAAGC-GGCGCGCGC CCGG GCGCGCGCCGGCCACTGCG  ACACCCGCGCTCAGC  65 36
CXD91_RS03570  717782 ..  717811 - -15.7  -3.01712   CCCCTGGCTGGAAGA       GGACGCGGCG-GCC TGA GGCGCGCCGCCTCC       GCGTGCGTCAGGCCA  77 33
CXD91_RS03555 NONE
        recQ  713330 ..  713357 - -16.2  -3.14344   GACGGCGCGCACGAA        GTGGCGCGCCGC TCGC GCGGCACGCCGC         GTATCGCCAACCGCC  80 410
CXD91_RS03540  711490 ..  711508 -  -6.6  -3.40403   TTCCGCCGATGACAA             GGATACGC ATC GCGCAGCC             CCCTGTAGCATCATT  55 90
CXD91_RS03535  710355 ..  710385 -  -6.6  -3.39784   GCATCGGCAAGAAGA       CCGCGGAGCGCCTG CTG CTGGAGATGCGCGG       CAAGCTGGGCGCGGA  55 228
CXD91_RS03500  704530 ..  704583 -  -6.5  -3.18264   CTGGTGACCGAGGAA GGCTGCGAACTCA-TCACCCGCGGCG TGC CGGTGCAGGCGCGCGAGATCGAAGCC CTGATGCGCGAATAG  51 50
CXD91_RS03490  701687 ..  701711 - -14.3  -2.87132   TGCGCGTCGGACATA          CCGCACCCTGC ATG ACAGGATGCGG          CAGATGGGTGCTCTG  71 218
CXD91_RS03485  700959 ..  700973 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 215
CXD91_RS03475  698903 ..  698914 -  -2.2  -3.53566   AGCCAAGAAGAAAAG                CAGA CTGG TCCG                 ATGCCAAAACCCGCA  48 224
CXD91_RS03470  697654 ..  697692 - -18.8  -2.79831   GTCATCCGAAAACAG   CCAGCAGGTGGCGAGGCG CGA CGCCTCGCCGCCTGATTG   TAGTTGACGACGCGC  87 58
CXD91_RS03465  696717 ..  696749 -   -10  -3.53012   GCCCTGGGCCGCAAA     TACCACGGCCTGATT CCGG AATAAGGCCG-GGTA      TCGAAGCCGCGCTCA  67 38
CXD91_RS03455  694261 ..  694280 - -11.4  -3.21354   GCATACAGCCAGCAA            TCGCGCGG CTGG CCGCGCAA             CGCTGCCGGCATCCA  66 53
CXD91_RS03430 NONE
CXD91_RS03425  690148 ..  690162 - -12.8  -4.27316   CGCCCCAAGGCAAAA               GCCCCC CTG GGGGGC               AGCAAGCTGGCGCAG  91 69
CXD91_RS03420  688383 ..  688401 -   -11  -3.13403   GCTGGGCGAGGAAGA             CGTCGAGA ACT TCCCGACG             CTGCTGGTGCAGGCG  64 190
CXD91_RS03410  687264 ..  687274 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS03405  686224 ..  686249 -  -9.7  -5.00616   GGTTTCCGGAAAAAA         TG-AGGCCCCCC CCG GGGGGGCGTGCA         GGGCAATGCGCTAGA  95 36
CXD91_RS03400  685250 ..  685278 - -12.3  -2.87132   GTGGTTGCGGATAGA        TGCCGCCCCGGGG CGG CGCCGATGCGGCA        CCGCAACAAGGAGCA  66 139
CXD91_RS03395  684215 ..  684227 -  -9.1  -3.71917   ACCGGAAACCGGAAA                CGACC CCA GGTCG                CCTGTTAGTCAGGCT  68 183
CXD91_RS03390  679700 ..  679758 - -22.6   -2.5474   GAAAAGCAATAAAGG CCGCGTCCCAAT--G-CGGCCGGGCCGCGC ATC GCGCGGCCCGGCCGGCCGATCGGG-CGAGG CCTGCGCGCCCGCCG 100 57
CXD91_RS03380  677664 ..  677684 -    -9  -5.40072   CCTTGGGCAAAAAAA           GAGGCCACC CGAA GGTGGCC-C            GAATTCCAGCTCTGC 100 95
CXD91_RS03350  672826 ..  672848 - -16.2  -3.34715   GACGTGCTGGAAACA           GGCTGGCCCG AAC CGGGCCGGCC           GCCCCTCATGGTGTC  82 158
CXD91_RS03290  661738 ..  661786 - -13.8  -3.35679   CCCTTCCAGTGAGAA CGGGCCATCG-GCCCGG-CCGC TGTCGGC GCGGACCGGGCACGCCGGGCCG CAACGACCTGCGGCG  77 207
CXD91_RS03285 NONE
CXD91_RS03280 NONE
CXD91_RS03275  658046 ..  658095 -  -9.7  -5.07011   CAGATAAAGGAAAAA CGATCCCGGGCCGGGCGGCGTCC CGAC GGACGCCCGCCAGCCCTAATACG CGCCGCCGATGCGGT  95 18
CXD91_RS03265  654722 ..  654773 -  -3.6  -3.14132   GGCCTCGCGCATCAA CGCCTCCTACGCCG-ACCCGGC CTGGCTGGCC GCCGGGCGCGGC-TCGGGCGCG CTGTGAAGGGTGCAA  45 125
CXD91_RS03255  652889 ..  652905 - -13.7  -5.60993   CGCCTCAGAAAAAAA              GCCCTCC GCT GGAGGGC              TTTTTCGTGGGCCGC 100 47
CXD91_RS03240 NONE
CXD91_RS03235 NONE
        ftsY  644807 ..  644832 - -20.5  -2.90496   CCGTTCTGGAAATGA         CAACGCCGCCC GGAC GGGCGGCGTTG          CGGGCAGGCGCGAAC 100 46
CXD91_RS03155 NONE
CXD91_RS03150 NONE
        nusB  634344 ..  634376 - -11.1  -3.72695   ACTCCTGCCAGCAAA      CGCGAACGGACGCGC CGC GCGGGCGCGCCCGCG      GAAGGTCAGCGCCGC  73 31
        thiL NONE
CXD91_RS03135 NONE
CXD91_RS03130  632087 ..  632130 - -14.4  -3.28745   GCGGTAAGAACGTAA CCCCCCGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCGCTGAC TTCTCAGGGTGCCTG  75 119
CXD91_RS03105  625134 ..  625157 - -19.6  -6.06723   CTTCCCAAAAAAAAA          CCCCGCCAGG TTCG CCTGGCGGGG           TTTTTCATTGGAGCT 100 44
CXD91_RS03055  614410 ..  614420 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 192
CXD91_RS03045  613361 ..  613371 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS03040 NONE
CXD91_RS03035  611394 ..  611408 -  -3.4   -4.2828   CCGCATCCAGGAAAA               GGCGAC CGT GCTGCC               CGATGGCGGCGAAGT  67 245
CXD91_RS03020  608613 ..  608639 -  -2.8  -5.06103   ACAATTTGCAAAAAA         TAGCCAGACCGC TGG GCAGCCGGACAA         GCCGCGCTGCTCCCG  79 442
CXD91_RS03010 NONE
CXD91_RS03005  607830 ..  607873 - -22.8  -2.72471   GCGCCACCAGAGAAT TCAAAACAAAATGCCCGCAA TCGC TTGCGGGCATTTTGTTTTGT GCGCGATGAAGGACA 100 80
CXD91_RS02985 NONE
CXD91_RS02980  602985 ..  602998 -  -5.9  -3.30474   GTTCACAACTAGCAA               GGCCG GCTA CAGCC                AGCGCTCGAACAGGC  53 18
CXD91_RS02955  597258 ..  597280 - -12.7  -4.57569   TGATGTGCCCAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGCC 100 57
CXD91_RS02945  596312 ..  596340 - -15.4  -3.72576   CCTGCCTTCATGAAA       GCCCCGGTCAATC GCAT GATTG-CCGGGGC        TTTCTCTTTGCCGCG  85 46
         rnr  593299 ..  593324 -  -6.7  -4.08064   AACGCCGCCGGAAAA         CGGCGGC-GGGC CGG GCCCTGCGGCCC         GGTCTACGGTGCAAT  67 80
        rlmB  592483 ..  592505 - -12.6  -3.03124   TCGGACGTTCGAAGA           GGCGCGCGGC GCG ACGGCGCGCC           GCTGCAAGAGTTTAC  67 37
CXD91_RS02925 NONE
CXD91_RS02920  590404 ..  590418 -  -3.4  -4.66537   GCTGTCAAGAGAAAA               CAGCGC CCT GAGCCG               CGCCAATACTAGCTT  71 105
CXD91_RS02915  589876 ..  589888 -  -9.1  -3.64703   GTTTTGTTAGGCAAA                TCGGC AGC GCCGA                TTTGCCTTTGCGTCC  68 42
CXD91_RS02910  589621 ..  589654 - -12.4   -5.4505   GCGCGCAACAAAAAA    CCCCGTGCG-GTGCGC CGAT GCGCCCTCGC-CGGGG     TTATTGCGCCTGCTT 100 92
CXD91_RS02905 NONE
CXD91_RS02900 NONE
CXD91_RS02895 NONE
CXD91_RS02890 NONE
CXD91_RS02885 NONE
CXD91_RS02880  583239 ..  583251 -  -4.7  -3.69068   GGACGGCAAGAAATA                GGCGG CAA CCGCG                CGAGGGTGCCTGTCC  55 98
CXD91_RS02860  578713 ..  578771 -  -4.3  -3.15544   GGGCACCCGGACGAA TTGGCGGCGGGCCACTGGACGGTGGGCTA CGC CAGCCCACAGACCGGCCGCGCGCTGCC-- CTGGGAATGCGCCAC  45 331
CXD91_RS02830 NONE
CXD91_RS02825  572878 ..  572888 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS02820  571862 ..  571874 -  -4.7  -3.57144   GGCCCGAGCCGCAAA                GCGCC CCG GCCGC                TAGCTGTGAACTGTC  54 25
CXD91_RS02810  569462 ..  569490 - -13.1  -3.14564   GCAGCTGCGCATGAA        TGCCTACGCCACC CAT GGCGGCGTGGACA        AGAAGCGCTTCGAGC  68 275
CXD91_RS02780 NONE
CXD91_RS02775  564012 ..  564038 -  -6.4  -3.87373   CAGATCGGCCAGAAA         GGCCACGGCAAG GCC CTCGACTCGGCC         CACTGAGGGCCGCTT  62 50
         smc  558907 ..  558928 -  -2.9  -3.28447   TCACTCATGAGAATA           TCCCGC-GCC TAA GGCAGCGCAA           ATCCGAATATGGGTT  46 41
CXD91_RS02760 NONE
        ligA  555688 ..  555717 - -19.5  -3.15663   AGCCATCGCCATCAA       CAAAATTGCCCGC TTTC GCGGGCAATTTTG        TTTTCGGCTGCCGGG 100 59
CXD91_RS02730 NONE
CXD91_RS02725 NONE
CXD91_RS02720  551543 ..  551559 -  -4.3  -3.05471   AGTATCAAATAACCA              CCCCGAC CCC ACCGGGA              TCAACCCTAATCCGG  45 131
CXD91_RS02715  550170 ..  550193 - -19.6  -2.62735   ACACGGCGCATACGA          CGCACCGGCC CTCA GGCCGGTGCG           AGGTGAAGCAGGAGA  93 101
CXD91_RS02710 NONE
CXD91_RS02705  546894 ..  546913 -  -7.8  -3.29461   CAAGGGCTTCGACAA            CGCCATCA TGCT CGACGGCG             CGGGCCATGTCGCGG  55 392
        pncB  535086 ..  535103 - -14.1  -4.17048   GGTTGGCGAAAACAA             GCCGGCC CTCA GGCCGGC              GGAAGCTGGAACACC  91 16
CXD91_RS02635  534564 ..  534603 -   -18  -4.08945   ACCATCCCGGCAAAA  TGAAGGCATTGCGGCATC GGCC GATGCCGCAATGCCTGTA   CCGTCCCGAGGCGCG 100 114
CXD91_RS02620  530844 ..  530858 -  -4.2  -4.09685   CCGGAGCGTGCAAAA               GACCTA GTG TAGGGC               ACGCGGCCGCCCCCG  61 64
        argE NONE
        trpB NONE
CXD91_RS02605 NONE
CXD91_RS02600  526532 ..  526563 - -10.8  -4.67353   GCATGCATGGAAAAA      TAACAACGCCCGGC CTGG GCCGGGCGTTCGCA       GGCACTGCCGGCGGG 100 46
CXD91_RS02590  524526 ..  524579 - -13.7  -3.68359   GCCGGAAAATCATAA GACCACTCCTCGGGTGCCTGTCCCC GCAG GGGGACTGGCACCCGCCAATTGTCC CCGCTGCGGCAAGGG  80 86
CXD91_RS02585  523389 ..  523415 - -23.8  -3.92869   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 66
CXD91_RS02575  518769 ..  518781 -  -4.1  -3.42809   AATACCACCAACGAA                TAACC CAT GGTCA                GGCCGTCTCCAGTTG  49 23
CXD91_RS02570  517998 ..  518055 - -15.6  -3.27408   TCTTACCCAAATAGA CGGTGGCGTGCGCCGCGCTATTCCGTCGC CGG GCGACGG--CAGCGCG-CGCATGGCGCCG ATCCAGGTAAGACAG  80 75
        msrP  516996 ..  517012 -  -2.1  -3.16564   TGGGGACCTCAGTAA              TTGGCCC GCA GGTCCAG              GCCCTGGTAGAGGCT  42 2
        msrQ  516119 ..  516153 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS02545  513914 ..  513945 -  -5.1  -4.03234   GTTGCGGCATAGAAA      GCTGACGCCCGC GGCCGCCAG GCTGGCG-CAGC      TGGTGCGCGACCTGA  63 77
CXD91_RS02535 NONE
CXD91_RS02530  510956 ..  511005 - -13.5  -3.96148   GTTTTCCACGATAAA CGGCTGGCCCAGCGCCGCGGCCA GCTTTT CGCCCGCGGCGC-GGGCG-GCCA CGTCGGTGGCCTGGC  84 219
CXD91_RS02520  509877 ..  509894 -  -2.7  -3.14132   CTGCTGCTGGACGAA             GGCAA TGCCTATC TTGCC              GCGGGCCTGGCCGGC  43 303
CXD91_RS02510  508514 ..  508559 - -10.4  -3.05384   CCCTTGCCCATGTAA TGCGTGACGCGCTACTTAAC TTGGGC GAATAGTAGCGCGTGACGCA TTATATAAGAATGAG  60 117
CXD91_RS02505  505099 ..  505109 -  -3.2  -3.59979   GTTGGGCATGGCAAA                 CTCC TGA GGAA                 GGCAAGAATAGGATT  49 39
CXD91_RS02500 NONE
        pruA NONE
CXD91_RS02490  500875 ..  500888 -  -5.9  -3.34947   CAACAAGGCCCACAA               CCGGC ATCA GCCAG                GCACGCATGCGGCGA  52 384
CXD91_RS02480  500012 ..  500046 - -22.3  -3.53012   CTGCGTTGCGCCAAA    GACAAAGGCCGCCCGG CATG CCGGGCGGCCTTTG-C     GGGCAGCGCGCCTAG 100 42
CXD91_RS02475  498937 ..  498947 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS02470  497915 ..  497954 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTTGTCCAGG  64 4
CXD91_RS02465  496690 ..  496703 -  -5.3  -2.83403   CGCGCGGCAGGAAAT               GAAGA AAGG TCTTC                TCGCCATGCCGCCGG  46 206
CXD91_RS02440  490085 ..  490115 - -12.5  -3.29144   CCACGTGCCGTACAA       GGGTACGTCGGCC GCGCT GGCCGACGTGGCC       GGGGGCGTCGTGCAA  70 423
CXD91_RS02415  485511 ..  485521 -  -6.8  -3.51825   GGACTCGAACGAGAA                 TGCG TTC CGCA                 TGGCGGCGTCGATGG  58 378
CXD91_RS02405  482609 ..  482621 -  -6.2  -3.60792   CCTCGAATGGTGAAA                CGCC GGACA GGCG                GGATCTGTGGAAAGT  56 89
CXD91_RS02400  482200 ..  482220 -  -2.5  -3.13906   GCTAACGGAAAACCA           CCCGCCGA CGCACC CCGG-GGG            AGACCCGCCCTTGAC  42 46
CXD91_RS02395  481631 ..  481656 - -18.3  -5.42862   ACAGGCCGAAAAAAA         GCCCCG-CGGCC TGC GGCCGGCGGGGC         GTGTACGGCGCCGGG 100 51
CXD91_RS02390  480781 ..  480809 - -10.3  -3.55444   TCTGGATGGGGGAAA       GCGGCCGGC-CGG GCTTG CCGTGCCGGC-GC       ATTGGTGTCACTCTA  67 89
CXD91_RS02375  477135 ..  477169 -  -8.5  -2.71364   GCAGGGCGCCAAGTA    CGCCGAGCACGCCGCC ACCC GG-GGCGTGATCAGCC     GCGAGCTCTACGCGG  52 504
CXD91_RS02325 NONE
CXD91_RS02320 NONE
CXD91_RS02315  465395 ..  465411 - -15.1  -5.75945   ACGCCCCAAAAAAAA              GCCGCGC AGA GCGCGGC              AGGAGGAAAACGGAA 100 55
CXD91_RS02310 NONE
CXD91_RS02305 NONE
CXD91_RS02300 NONE
CXD91_RS02295 NONE
CXD91_RS02290 NONE
CXD91_RS02285  458487 ..  458523 -  -9.9  -3.69395   TCGACCATGGAACAA    CGCCGCGTTGGCCAGCG CCG CGCCGGCCACCGTGCTG    CGGCGGCCGCTGCCC  70 303
CXD91_RS02275 NONE
CXD91_RS02270 NONE
CXD91_RS02265 NONE
CXD91_RS02260 NONE
        lpdA NONE
CXD91_RS02250  450372 ..  450393 -  -4.3   -2.5474   CGCGATGGAGAAGAT           CCTGCACGGC AAC GCCGAAC-GG           CTGCTGGCGCAGGCC  42 103
CXD91_RS02230  445732 ..  445765 -  -7.3  -3.65902   TCGAGCGCATGTAAA     CCCCCCACCCGGG TGCCTGTC CCCGCACGGGGGA      CAGGCACCCGCTGAC  61 50
CXD91_RS02220 NONE
CXD91_RS02215  443401 ..  443439 -   -11  -3.20723   TGTCGAGGAACTCAA  CTGCGCCACCACCGGCG TGTTCG CGCCGCTGGTGG-GCAT   CATCGGCAGCGGGCA  64 224
CXD91_RS02190 NONE
        grxC NONE
        secB NONE
CXD91_RS02175 NONE
CXD91_RS02170  435179 ..  435216 - -13.3  -2.79183   TGCAGGTGCACGACA   CGCTGCCGCAGGCGCTGG CGG CCACCGGC-GCGGCTGCG   CCGCGCATCTTCGCG  67 293
CXD91_RS02155  433015 ..  433027 -  -9.1  -4.09685   GTCCATGGCGCAAAA                CTGGC GCG GCCAG                GGCGTCCAGGACACC  72 173
CXD91_RS02100 NONE
CXD91_RS02095 NONE
CXD91_RS02090 NONE
CXD91_RS02085  417124 ..  417174 -  -8.1  -4.32857   GCTGGCAAAGACAAA GTGACACTCAGGTGCCTGTCCCC GCACG GGAGACAGGCACCTGCCGAACCC TGGGAGCCCGTCCTC  77 49
CXD91_RS02050  410733 ..  410760 -  -6.2  -3.17714   CGAAATCTTCATGAA        GCTGCTGTCGAC GCTG GTCGACGCCAAC         AATCAGTACAGCCGC  50 69
CXD91_RS02010  401296 ..  401308 -  -7.7  -3.61398   CCGGTTTCCCAAGAA                CGTCA ACC TGACG                GGCACGATCGCGCTG  60 299
CXD91_RS02000 NONE
CXD91_RS01995 NONE
CXD91_RS01990  398648 ..  398658 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS01985 NONE
CXD91_RS01975 NONE
CXD91_RS01970  395350 ..  395392 - -14.2  -3.33696   TCCGCCTGGAATGAA CGGTGCGCGGGGCGGACGGCC TGCG GGCCG-CCGCCC--CGTACCG CATCAGTGCTTCATG  75 28
CXD91_RS01955  391997 ..  392021 - -14.9  -2.90075   GGCGTTCGAACCATA          TGCCGGCGGCC TCA GGCCGCCAGCG          AAATCGATACCGGCG  73 12
CXD91_RS01950  390425 ..  390439 -  -2.7  -3.72576   CCTTGCTGCAGGAAA               TCGGC CCGTT GCCGC               TGTCCGGCCAGGCCT  53 464
        kynU NONE
CXD91_RS01920 NONE
CXD91_RS01915 NONE
CXD91_RS01910  384403 ..  384430 -  -3.2  -3.54424   TGGGACGGTCGGAAA        CGGGTCAGGGCGC GGC GCGCGC-GCCGCG        GACATCAAGAACGGG  49 49
CXD91_RS01905  383168 ..  383182 -    -7  -2.62983   GGCAGGCCGAGATCA               GCGTCG AAC CGGCGC               TGCTGGCGCGCTTCG  48 293
CXD91_RS01880  380146 ..  380173 - -19.2  -3.02324   CTGATCGAAAGCACA        GGTGCCCGTCCC TGTC GGGACAGGCACC         GAATCAACACGGCGC 100 57
CXD91_RS01865  376958 ..  376999 -  -6.5  -3.11634   CCCCAGATGACGGAA CCCGTGCAGGCGCACCGATC ACA GATCGCT-CACCGGCACCGA CAGCGATTCGGCCGG  51 2
CXD91_RS01860  375762 ..  375812 - -18.9   -3.6579   AAGGGATTCTAACAA CAGC-CCGCCTGGCCGGCGGCGGC GCCG GCTGCCATCGGCCAGGCGCCGCCG CCCTGTCGATCGCTC  95 39
CXD91_RS01855  374867 ..  374901 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD91_RS01840 NONE
        rocF  371711 ..  371721 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 80
CXD91_RS01830  370538 ..  370552 -    -7  -3.41693   CCCACCATGAACGAA               GCGGGC GTG GCCGGC               TACGCCAAATCGGGC  58 180
CXD91_RS01765  354755 ..  354781 -  -2.1  -3.61178   CGGATGGATCGGAAA         TTCGGGTCAGC GGACG GCAGGCCGGAA         CGCCTGCAGCCAGGG  48 5
CXD91_RS01760  353529 ..  353543 -  -2.7  -4.07568   CTGCGCCGGCGAAAA               CGGCG GCGCG CGTCG               AGCATAGCGTATTGC  59 70
CXD91_RS01755  353064 ..  353088 -   -15  -4.57073   CACCCTTGTGAAAAA         CCCCGCC-GGC GCAG GCCTGGCGGGG          TTTTCATGGGTGGAC 100 49
CXD91_RS01740  350591 ..  350601 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 71
CXD91_RS01735 NONE
CXD91_RS01730  348897 ..  348913 - -10.8  -5.10497   AACCGACGCAAAAAA              GCCCGC TCGAG GCGGGC              TGTTGAACTACGGCC 100 47
CXD91_RS01725  348481 ..  348491 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS01715  347443 ..  347488 -    -6  -2.89564   TTGGTATCGGACACA GTTATCTCCTAGCCCCTACC GGGGCG GGTGGGGGTTAGGTGTGAAC TGTCAATAGGTTGTA  48 14
CXD91_RS01710  346875 ..  346885 -  -2.4  -3.39895   TGCTTCATGAACGAA                 CCGC CGA GCTG                 GGCCATTACCTGCAC  46 114
CXD91_RS01700 NONE
CXD91_RS01695 NONE
CXD91_RS01690 NONE
CXD91_RS01685  344528 ..  344542 - -12.8  -3.02511   GCTACGTGGGTAATA               GGGCGG GCG CCGCCC               AGGGAGATCAGGCGG  67 33
CXD91_RS01680 NONE
CXD91_RS01675 NONE
CXD91_RS01670 NONE
CXD91_RS01665 NONE
CXD91_RS01660  341688 ..  341698 -  -8.2  -3.54424   TGCTATCCCTCGAAA                 CCGC CAT GCGG                 TCAGGCGAGCTGCTG  63 406
CXD91_RS01640  336664 ..  336692 -  -4.4  -3.44622   GACCCGCAGAACGAA        GTGCGCTGGCCG CTGAC CAACCAGCGCGG        GGAATCGGTCGAAGT  49 329
CXD91_RS01625  334443 ..  334462 - -16.4    -3.767   GAGCCAGCCACGAAA            CGGCGCCC TGCG GGGCGCCG             TTTTTTTCGTCCTGG  91 219
        dnaA NONE
CXD91_RS01595  328819 ..  328832 -  -2.3  -5.03145   TAACGCCTTAAAAAA               CAGCC TCAC GGCCA                CACCGTTCGCGCGCG  79 81
        gyrB  326291 ..  326312 - -13.7   -4.4078   CGCCCCCAAGCAAAA           GAGGCTGCC TCAC GGCAGCCCC            TTTCGGCATACGACG 100 53
CXD91_RS01580 NONE
CXD91_RS01575  322475 ..  322529 -  -6.3  -3.76759   ATGAAGGTCAGGAAA GCGGCACGGCG-ATGGCCGGCCTTCGC GCG GCGAGAGCCAGT-ATACGCCGCCCCTC GCGCACGCCTGCAGG  62 369
CXD91_RS01565  321187 ..  321237 -  -6.3  -3.44848   TCGGCGTAGTAAAGA CGGGTCTTGGGCTTCA-TGCGATC TCCAGT GAACGCAATGTAGCC-AAG-CCCG CTTTGCAGATTTTGC  55 79
CXD91_RS01560  320330 ..  320343 -  -9.5  -3.26471   CTACGGCCATAGTAA               CCGGG CCGG CCCGG                GCGGGCCTGCAACGC  61 40
CXD91_RS01550  317360 ..  317389 -  -8.7  -3.09681   GAAAACCCGACTCAA       CTTTACGTTTACG TTTA CGTAAACGTAATA        TTTGCACTGCATCAT  56 487
CXD91_RS01535  315562 ..  315596 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 218
CXD91_RS01515  310659 ..  310672 -  -3.1  -2.79796   CGGGATTCGATGATA               GGCAT GGGC ATACC                CGTGGGGCGTTGATG  40 117
CXD91_RS01510 NONE
CXD91_RS01505  306954 ..  306992 -  -6.7  -3.14931   GTCACGCCGGAGCAA  GGCTGACCCGACGCCGGGC CGC GCCCGGCGTCAT-TCA-CT  TCACTTCGATCAGCG  52 21
CXD91_RS01490  304149 ..  304186 -    -9  -2.70932   TCTCGCCGCCAACGA   CGAGCACGGCGTGGCGC GGGTG GAGCC-CGGCGCGCCCG   CGCCGGCGCTGGGCA  52 188
CXD91_RS01480  301956 ..  301968 -  -6.2  -2.64155   CCTGGCGGAAAGGCA                GCGC GATTG GCGC                ATTGGAGTCGGGACG  46 70
CXD91_RS01475  299802 ..  299831 - -20.9  -3.29144   CGACCGCGTCCAGAA       TGCACAACCCACC TTGC GGTGGGTTGTGCA        TTGCGTCGGCGCCCG 100 59
CXD91_RS01470  297344 ..  297363 -  -3.4  -4.07568   CGCGGCTCTGTAAAA            GGGGGCAG TGCG CTGCGCGC             GGTCTTCACGTTTTC  59 87
CXD91_RS01465  296639 ..  296674 - -16.8  -2.70525   GTTCCGGAAATCAAT    GCGATGGCGCGCCAGC ACGG GCCGGCGCGCCATGTC     TGGCGCGGCCGCATC  80 39
CXD91_RS01450  290349 ..  290371 -  -5.4  -3.50853   TTGCGGCAACGATAA           CGCAACTGGC CGC GTCGGTCGCG           TGGACCGCGCGGTGC  54 102
CXD91_RS01445  289237 ..  289247 -  -8.2  -2.82635   AGCTCGATCATCACA                 GGCC CCG GGCC                 TTGCGCACGAATCGC  54 10
CXD91_RS01440 NONE
CXD91_RS01435 NONE
CXD91_RS01430  286799 ..  286820 -  -3.5  -3.64822   AGTCCTGCAGGGAAA           CGGCGCGCA GCCT CGCGGGTCG            GGCAAGCTCAGAACT  54 33
CXD91_RS01425 NONE
CXD91_RS01420  284046 ..  284093 -  -2.7  -3.02511   CGCATCCCGGCAAGA CCGTGG-TGTGCGTCAGCGGCGA CGCG TCGGTGCTGATGAACATCCA-GG AGTTGTCCACCGCCA  41 467
CXD91_RS01410  281931 ..  281947 -  -5.7  -3.28712   CGGCCTGGCCGAGAA              CGACCTG CCG CTGGCCG              CGCTGGCGCGCGATC  52 137
CXD91_RS01400  280211 ..  280241 -  -8.9  -3.21063   CAGCCAAACGCAATA      CCGCGCAGGCGCGC GAGC GCCCGTCTG-GCGG       GAAAGTGCCGGCACA  56 299
CXD91_RS01395  279194 ..  279204 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 270
CXD91_RS01385  277804 ..  277843 -  -8.6  -3.02144   TCAGCGCCGCCAACA  CCATGCGCCTGG-ACAACA TGG TGCTGTACCAGACGCCCAG  CCTGGATGGTTTCAA  55 372
CXD91_RS01315 NONE
CXD91_RS01310  263691 ..  263741 - -13.4  -2.53876   TCCCAGCGGAATCCA GGGCATCGTGATCGG-GCCGCACGGC CTG GCCG-GCGGCGCCGATC-CG-CGCCG CGAAGGCCTGGCGCT  67 58
CXD91_RS01300  260970 ..  260985 - -11.8  -3.57144   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC  72 46
CXD91_RS01290  258813 ..  258835 - -12.7  -3.24747   GGGCGACATGACCAA          CGCGCGCCGC TAGA GCGGCGC-CG           GGCGCGTCAGTTGGG  71 32
CXD91_RS01280 NONE
CXD91_RS01275  255291 ..  255328 -    -9  -3.35679   CGCGGGCAGTGAGAA   GCGGGCGCCCGTCCCC GTTGGG GAGGAGCGACACCCGC    GGCAAGGGTGCCTGT  63 127
        mutL NONE
        miaA  251701 ..  251730 - -23.7  -2.78816   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 30
CXD91_RS01250 NONE
CXD91_RS01245 NONE
        pcnB NONE
CXD91_RS01235  246910 ..  246923 -  -4.5  -3.38326   CAGAAGCTGAACGAA               GCGTCG GCG CG-CGC               GCTGAACACGCCGGC  49 189
CXD91_RS01215  241337 ..  241368 - -15.9  -3.76413   TTGCAAAATGGGAAA      GGCATCCGGTGCG TGCGAG CGCACCGGACACC       ATTGGACGGCCTGCG  90 42
CXD91_RS01210  240356 ..  240366 -  -2.4  -3.29144   CGACCTGGCGCACAA                 GGAC CTG GGCC                 TGGCGCTCGAACTGG  44 257
CXD91_RS01190  237374 ..  237384 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS01185  236253 ..  236267 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
        thiC  230320 ..  230334 -  -8.5  -3.02263   ACACCTCGGTCAAGA               CCGCC TACAC GGCGG               CCTGACCCGCATGGC  55 72
CXD91_RS01140 NONE
CXD91_RS01135  225083 ..  225132 -  -9.8  -2.82015   GCCATAGGCAGCATA TCGGCGACGGCGGCGCC--GCGGA TTTT CCCGCTTGGCGCGGCCGACGCGGC GCCGGTAGGCATCGC  56 396
CXD91_RS01125  223521 ..  223533 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTACCCGGACTGCCG  50 368
CXD91_RS01115  219864 ..  219892 -  -2.3  -4.92756   ATGATCAAAAACAAA        TCATCCTGGGACG CAG CGCCTCAAAATGT        TGGGAGGCTTCCGGG  76 237
CXD91_RS01110  216600 ..  216629 - -23.7  -2.78816   TCATGGCGCATGACA       GAGCGCCTGTCCC CGTG GGGACAGGCGCTC        TTGCCGCTGGTGTCG 100 111
CXD91_RS01105 NONE
CXD91_RS01100  213852 ..  213865 -  -3.7  -3.33696   GGGCTCCGTAAGGAA               GGCGC GGCG GCGTC                AGTGGGTCAGGTAAC  47 24
CXD91_RS01095  213038 ..  213071 - -12.4  -2.82519   CGAGCACATCAACCA    GGCGCTGCGGCGCCGC TGAG GCGGCGC-GC-GCGCG     ATGCGCGAGCAGGCG  66 61
CXD91_RS01085 NONE
CXD91_RS01080  210713 ..  210733 - -19.7  -4.11216   CTTCGATCGGTAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGGCGTTCAG 100 37
        catC NONE
CXD91_RS01070 NONE
        pcaD NONE
CXD91_RS01060  207923 ..  207935 -  -4.7  -3.73068   GGCCGAATGCAACAA                GTCGG CAA CCGGC                AAGACCGGCGACGAG  58 310
CXD91_RS01030  202851 ..  202861 -  -8.2  -3.28712   GGCGCGGGTGGACAA                 CGCC TAT GGCG                 ACCGCAACCTGGTGT  59 217
CXD91_RS00980 NONE
CXD91_RS00975 NONE
CXD91_RS00970  189323 ..  189335 -  -4.8  -3.41051   GCAGTTCGACGAGAA                GTCG TTCGT CGAC                TTCAAGGGCGATGTC  52 372
CXD91_RS00945  181958 ..  181987 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGT GCCACGGCGGCGCT       GCAGGGGCCGGCGGG  91 50
CXD91_RS00940  179649 ..  179675 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GTG GCGGGCCGGCGG         CGGCGCGCTCAGCGC 100 34
         bfr  174609 ..  174630 - -17.3  -3.75629   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG  91 63
CXD91_RS00880 NONE
CXD91_RS00875  167977 ..  168032 -  -6.7  -3.15544   CGCTATCCGCACGAA TTCTCCGGCGGCCAGCGCCAGCGC-AT CTGC ATCGCGCGCGCGCTGGCCACCCG-GCC GCGCTTCCTGATCTG  52 330
CXD91_RS00865  165584 ..  165641 -  -2.7  -4.11484   CTGAACTCTTCAAAA CCATGGAAGCGGTGCGCTGGAATAT-GG CGT CCGATATCCCATGGGACGACTTCGACGG CAGCAAGCTGTCGGA  59 327
        phoB NONE
        phoR NONE
CXD91_RS00825 NONE
CXD91_RS00820  156672 ..  156699 -  -2.7  -2.66316   CGGCCGACGATAGCA       GGGCG--GGACTG ACCT CAGTCTGTCGCCC        GGATTACGCGTTTGT  39 12
CXD91_RS00815  156036 ..  156048 -  -7.7  -3.78934   TTGCCTGTACAACAA                GGGTT GAA AACCC                CCCCCCCATTGTGGA  66 96
CXD91_RS00810  154543 ..  154558 -  -3.2  -3.73775   TCGAGCTCGACGAAA              TCGACG CCAT CGCCAA               CCTGGTGCGCCACGG  55 282
CXD91_RS00800 NONE
        pxpB NONE
CXD91_RS00790  151133 ..  151155 -    -9  -3.01712   TCCGGTCGGCGAAGA           CTTCCTGCGC CGC GCGCAGGCCG           ATGGCGCGGGCAGCG  57 495
CXD91_RS00775  148889 ..  148901 -  -5.5  -3.01712   GCGGCGCCGCCAATA                CCGCA TCC TGCGA                TGATGACTCGCATAG  47 110
CXD91_RS00765 NONE
CXD91_RS00760 NONE
CXD91_RS00755  144575 ..  144616 -  -9.2  -3.72027   AGCGCCTACGAACAA TGGGCGGGCGACGC-CGGC GACGA GCCGGGCGACGACCGCCTG CGCGTCGCGTAGGCC  68 125
        ilvA  137211 ..  137221 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 380
CXD91_RS00725 NONE
CXD91_RS00715  133783 ..  133823 -  -8.8  -3.05715   AATGCCGTTACCGAA CGCCAAGTCCGCGCCTGCG TGGA CGCGGGCGCGG-CTACGCT  GGGCGATCTCCAGTT  55 264
CXD91_RS00700  131505 ..  131524 - -16.4  -3.85165   CAGCGCAAATGTAAA            CGGCGCGC CAGG GCGCGCCG             TCAGGCCGGTCCGGG  91 55
        leuA  129069 ..  129097 - -16.7   -3.1372   GACCGCCGAGCAATA        CCTGGCCCACCTG GCG CAGGCGGGGCAGG        CGCGCGCGAAAGTGG  80 355
CXD91_RS00680 NONE
CXD91_RS00675  125744 ..  125788 - -17.8  -3.19653   CCAGAAGGCCAGGAA CAGCGCCGCGGCCGGC-GCAG CGAA CAACAGCCATCCGCGGCGCTG CATATCAATTCACCT  86 30
CXD91_RS00665 NONE
CXD91_RS00660  123176 ..  123186 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS00655  122098 ..  122126 -  -2.9  -3.30701   TTCCAGGAAATTCAA        TGGGCCGCCAGCA CCA CGCTGACGGACTG        GCCGGTCTGATAGGT  46 71
CXD91_RS00650  121222 ..  121243 - -10.8  -2.84325   GCGGTGCAAACATGA           CGCCGCCA TGTCAG CGGCGGCG            CTTGTTTCACTCGTC  61 32
CXD91_RS00645  120112 ..  120126 - -12.8  -3.48276   CGGTGGTTCACAGAA               CCGCCG CGT CGGCGG               CGAAGAAATGCTGTC  73 3
CXD91_RS00640 NONE
CXD91_RS00635 NONE
CXD91_RS00630  116911 ..  116929 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 182
CXD91_RS00610 NONE
CXD91_RS00605  112261 ..  112275 -    -7  -2.90714   TTAAAGCGTTACAGA               CTGCGG ATG CCGCGG               GGAAGTTCCATGGCG  50 43
CXD91_RS00600  111548 ..  111567 - -11.4  -4.08144   CCCATCAACGACAAA            GCCTCCGC ATGG ACGGAGGC             TTTGTGGCGTCGGGG  82 60
CXD91_RS00585  108432 ..  108442 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD91_RS00580 NONE
        rfbB NONE
        rfbD NONE
        rfbC  104821 ..  104856 - -16.1  -3.14878   GGCGTCAACTGAAGA    CGCGCGGGCCGCTAC GCATAG GTATCGGCCCGCGCC     AGCGCCACGCCCTGG  81 1
CXD91_RS00510 NONE
CXD91_RS00505 NONE
CXD91_RS00500   94077 ..   94110 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATT GCGGCGGGGGCGGCG      CTGCGTGCGCCCGAC  52 204
CXD91_RS00485 NONE
CXD91_RS00480 NONE
CXD91_RS00475 NONE
CXD91_RS00470 NONE
CXD91_RS00465   86735 ..   86750 -  -7.5  -2.62515   AATTCTCGCAGATTA              GCGCG AGGCTG CGCGC               CGTGGCGTGACAGAT  50 7
CXD91_RS00460 NONE
CXD91_RS00455   84787 ..   84810 -  -9.4  -3.53012   GCGTTGGTGCGCAAA          GGCGCGACAC TGCC GGGGCGCGCC           ATTGAGTGCGAGTCA  64 107
CXD91_RS00450 NONE
CXD91_RS00445   82754 ..   82775 -  -7.9  -4.62302   GAAGAGCCGGAAAAA           CCCAGTGCG ACGG CGCACAAGG            CCAGTGGCGTGGATA  81 73
CXD91_RS00435   79481 ..   79495 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 131
CXD91_RS00425   77326 ..   77352 -  -8.7  -4.07568   CTCGCTGCTGGAAAA         GCTGCCCGC GCAGCTCCA GCAGGCAGC         CGGCCAGCTGCAGGG  72 308
CXD91_RS00415 NONE
CXD91_RS00410 NONE
        ampD NONE
CXD91_RS00400   73382 ..   73413 - -10.1  -3.25823   GGTGCTGGAGATCAA      CCCGGACCACGCGC TGGTC GCGCG-GATCCGCG      ATGCCAGCGATGCGG  63 318
CXD91_RS00390   71199 ..   71221 - -12.6  -2.82742   ACGCTTTTATAACGA           CCGGCGCCCG CAT CAGGCGCTGG           GCATGAAGACTCCGG  66 195
CXD91_RS00365   66991 ..   67001 -  -8.2  -2.54655   AAAAGGCCCAACCCA                 GGGG TAC CCCC                 AAATTGATGATCCAT  52 507
CXD91_RS00355 NONE
CXD91_RS00350   64500 ..   64513 -  -5.3   -3.5323   AACTTCAAACAAAAC               TATCG CACT CGATA                TCAAGCGCATCGATC  54 1
CXD91_RS00345 NONE
CXD91_RS00340   63284 ..   63310 -  -4.3  -2.78384   GCGCGGCCCATGATA        TCCGTGCCC-CC ACCG GGTGGGAACGGT         ACGACCAGTGTAATA  43 189
CXD91_RS00335   62061 ..   62083 -  -8.4  -4.09685   GGTGATGGCGTAAAA           GGGCATAGCG ATC CGCTATATCC           AGCCTGGCAAGCCAA  72 385
CXD91_RS00325   60987 ..   60998 -    -3  -5.30348   ACTTAACAATAAAAA                TTCA AATA TGAA                 TGTTTAATTTAGTTA  89 105
CXD91_RS00320 NONE
CXD91_RS00315   58900 ..   58930 -  -5.3  -3.73068   GGTCGAAGCCAACAA       CCCCACCACCAGC ATCCA GCTGGTCGTGGCC       GGCATAGGGCTGGGT  57 344
CXD91_RS00305 NONE
CXD91_RS00300 NONE
CXD91_RS00295 NONE
CXD91_RS00290 NONE
CXD91_RS00285 NONE
CXD91_RS00280   53379 ..   53401 -  -4.8  -3.76482   CGACACCAGCAAGAA           CCTGGTCG AGGAAGG CGACAAGG           GCAAGCGCTACGCGC  58 247
CXD91_RS00235   45237 ..   45272 -  -2.4  -4.16842   TTCATGCTCAAGAAA    CGCGTGCGGATCCTG TGGCAGG CCGGCTGCGC-CGCG    CTGCTGCTGGCCGCC  61 474
CXD91_RS00215   43266 ..   43306 - -20.6  -3.53012   GTCTTGGCCGTCAAA CCG-CAGTGTGCCTGTCCC AGCG GGGACAGGCACACTGGCCG  CAGTTGGGACAGGCA 100 66
CXD91_RS00175   35576 ..   35594 - -13.1  -2.84298   GACAGTTCACAACTA             GCGCGGC GCCTG GCCGCGC             GGCAGCCAGTGCCAG  69 4
CXD91_RS00155   30988 ..   31001 -  -3.7  -2.70932   TCTCGCCGCGAATCA               TCGCC TGGC GGCGG                ATCCGGCCAGCATGG  41 94
CXD91_RS00150 NONE
CXD91_RS00145 NONE
CXD91_RS00140 NONE
CXD91_RS00135   28287 ..   28297 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD91_RS00130   26859 ..   26875 -  -5.8  -3.53012   TGCGCTGCCTGCAAA             GC-GGCG CGGA CGCCTGC              GTGCCCCTGCCGGCC  55 433
CXD91_RS00115   24044 ..   24068 -  -7.7  -2.97021   TCGGCAAAGATGATA          TCCAGGCCCAC TGC GCGGGCCTCGC          CCAGCTTGTCCAGCA  53 310
CXD91_RS00100   20076 ..   20099 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 53
