XA08_RS00005 SM01228 XA08_RS00005 XA08_RS00025 SM00470 ParB-like nuclease domain XA08_RS00030 SM00870 XA08_RS00030 XA08_RS00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XA08_RS00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XA08_RS00075 SM00649 Ribosomal protein L11/L12 XA08_RS00100 SM00663 RNA polymerase I subunit A N-terminus XA08_RS00130 SM00448 cheY-homologous receiver domain XA08_RS00130 SM00862 Transcriptional regulatory protein, C terminal XA08_RS00205 SM00563 Phosphate acyltransferases XA08_RS00245 SM00421 helix_turn_helix, Lux Regulon XA08_RS00295 SM00382 ATPases associated with a variety of cellular activities XA08_RS00310 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS00405 SM00387 Histidine kinase-like ATPases XA08_RS00415 SM00644 XA08_RS00415 XA08_RS00430 SM00382 ATPases associated with a variety of cellular activities XA08_RS00430 SM00962 SRP54-type protein, GTPase domain XA08_RS00430 SM00963 SRP54-type protein, helical bundle domain XA08_RS00530 SM00382 ATPases associated with a variety of cellular activities XA08_RS00550 SM00936 Penicillin-binding protein 5, C-terminal domain XA08_RS00570 SM00729 Elongator protein 3, MiaB family, Radical SAM XA08_RS00615 SM00836 DALR anticodon binding domain XA08_RS00615 SM01016 Arginyl tRNA synthetase N terminal dom XA08_RS00650 SM00382 ATPases associated with a variety of cellular activities XA08_RS00665 SM00382 ATPases associated with a variety of cellular activities XA08_RS00700 SM00917 LeuA allosteric (dimerisation) domain XA08_RS00755 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS00755 SM00895 XA08_RS00755 XA08_RS00785 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS00795 SM00797 Allophanate hydrolase subunit 2 XA08_RS00800 SM00796 Allophanate hydrolase subunit 1 XA08_RS00825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS00825 SM00387 Histidine kinase-like ATPases XA08_RS00825 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS00830 SM00448 cheY-homologous receiver domain XA08_RS00830 SM00862 Transcriptional regulatory protein, C terminal XA08_RS00835 SM00091 PAS domain XA08_RS00835 SM00387 Histidine kinase-like ATPases XA08_RS00835 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS00840 SM00448 cheY-homologous receiver domain XA08_RS00840 SM00862 Transcriptional regulatory protein, C terminal XA08_RS00850 SM00978 XA08_RS00850 XA08_RS00875 SM00382 ATPases associated with a variety of cellular activities XA08_RS00890 SM00487 DEAD-like helicases superfamily XA08_RS00890 SM00490 helicase superfamily c-terminal domain XA08_RS00935 SM00450 Rhodanese Homology Domain XA08_RS01030 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS01030 SM00895 XA08_RS01030 XA08_RS01080 SM00882 Coenzyme A transferase XA08_RS01085 SM00882 Coenzyme A transferase XA08_RS01090 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS01110 SM00869 Autotransporter beta-domain XA08_RS01145 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS01145 SM00895 XA08_RS01145 XA08_RS01215 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS01215 SM00895 XA08_RS01215 XA08_RS01255 SM00382 ATPases associated with a variety of cellular activities XA08_RS01270 SM00853 MutL C terminal dimerisation domain XA08_RS01270 SM01340 XA08_RS01270 XA08_RS01280 SM00646 XA08_RS01280 XA08_RS01360 SM00382 ATPases associated with a variety of cellular activities XA08_RS01365 SM00382 ATPases associated with a variety of cellular activities XA08_RS01450 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XA08_RS01480 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS01490 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS01540 SM00347 helix_turn_helix multiple antibiotic resistance protein XA08_RS01565 SM00382 ATPases associated with a variety of cellular activities XA08_RS01570 SM00382 ATPases associated with a variety of cellular activities XA08_RS01640 SM00732 Likely ribonuclease with RNase H fold. XA08_RS01655 SM00563 Phosphate acyltransferases XA08_RS01705 SM00849 Metallo-beta-lactamase superfamily XA08_RS01735 SM00267 diguanylate cyclase XA08_RS01760 SM00382 ATPases associated with a variety of cellular activities XA08_RS01780 SM00965 Secretin and TonB N terminus short domain XA08_RS01825 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS01825 SM00895 XA08_RS01825 XA08_RS01840 SM01236 XA08_RS01840 XA08_RS01860 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS01885 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XA08_RS01900 SM00845 GatB domain XA08_RS01975 SM00749 bacterial OsmY and nodulation domain XA08_RS02040 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS02080 SM00450 Rhodanese Homology Domain XA08_RS02185 SM00479 XA08_RS02185 XA08_RS02265 SM00829 Enoylreductase XA08_RS02275 SM00881 CoA binding domain XA08_RS02305 SM00344 helix_turn_helix ASNC type XA08_RS02330 SM00881 CoA binding domain XA08_RS02340 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS02370 SM00937 XA08_RS02370 XA08_RS02400 SM01092 CO dehydrogenase flavoprotein C-terminal domain XA08_RS02405 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XA08_RS02460 SM00382 ATPases associated with a variety of cellular activities XA08_RS02480 SM00116 Domain in cystathionine beta-synthase and other proteins. XA08_RS02510 SM00834 Putative regulatory protein XA08_RS02530 SM00155 Phospholipase D. Active site motifs. XA08_RS02570 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS02685 SM00382 ATPases associated with a variety of cellular activities XA08_RS02710 SM00487 DEAD-like helicases superfamily XA08_RS02710 SM00490 helicase superfamily c-terminal domain XA08_RS02730 SM00382 ATPases associated with a variety of cellular activities XA08_RS02790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XA08_RS02800 SM00905 Dihydroneopterin aldolase XA08_RS02830 SM00925 MltA specific insert domain XA08_RS02905 SM00903 Flavin reductase like domain XA08_RS02930 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS02930 SM00866 XA08_RS02930 XA08_RS02965 SM00382 ATPases associated with a variety of cellular activities XA08_RS03055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS03055 SM00387 Histidine kinase-like ATPases XA08_RS03060 SM00448 cheY-homologous receiver domain XA08_RS03060 SM00862 Transcriptional regulatory protein, C terminal XA08_RS03100 SM00257 Lysin motif XA08_RS03105 SM00849 Metallo-beta-lactamase superfamily XA08_RS03185 SM00822 XA08_RS03185 XA08_RS03195 SM00382 ATPases associated with a variety of cellular activities XA08_RS03200 SM00382 ATPases associated with a variety of cellular activities XA08_RS03280 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS03280 SM00866 XA08_RS03280 XA08_RS03300 SM00422 helix_turn_helix, mercury resistance XA08_RS03330 SM00988 UreE urease accessory protein, N-terminal domain XA08_RS03385 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS03415 SM00984 UDP binding domain XA08_RS03475 SM00448 cheY-homologous receiver domain XA08_RS03475 SM00862 Transcriptional regulatory protein, C terminal XA08_RS03480 SM00387 Histidine kinase-like ATPases XA08_RS03480 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS03515 SM00849 Metallo-beta-lactamase superfamily XA08_RS03520 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XA08_RS03520 SM01232 XA08_RS03520 XA08_RS03525 SM00028 Tetratricopeptide repeats XA08_RS03545 SM01400 XA08_RS03545 XA08_RS03650 SM00869 Autotransporter beta-domain XA08_RS03660 SM00862 Transcriptional regulatory protein, C terminal XA08_RS03700 SM00422 helix_turn_helix, mercury resistance XA08_RS03700 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS03745 SM00344 helix_turn_helix ASNC type XA08_RS03745 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS03790 SM00382 ATPases associated with a variety of cellular activities XA08_RS03795 SM00155 Phospholipase D. Active site motifs. XA08_RS03805 SM00986 Uracil DNA glycosylase superfamily XA08_RS03805 SM00987 UreE urease accessory protein, C-terminal domain XA08_RS03810 SM00487 DEAD-like helicases superfamily XA08_RS03810 SM00490 helicase superfamily c-terminal domain XA08_RS03865 SM00996 S-adenosyl-L-homocysteine hydrolase XA08_RS03865 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XA08_RS03935 SM00382 ATPases associated with a variety of cellular activities XA08_RS03950 SM00833 Cobalamin synthesis protein cobW C-terminal domain XA08_RS03965 SM00382 ATPases associated with a variety of cellular activities XA08_RS03965 SM01086 C-terminal, D2-small domain, of ClpB protein XA08_RS04065 SM00344 helix_turn_helix ASNC type XA08_RS04100 SM00151 SWI complex, BAF60b domains XA08_RS04115 SM00382 ATPases associated with a variety of cellular activities XA08_RS04185 SM00842 Cell division protein FtsA XA08_RS04190 SM00864 Tubulin/FtsZ family, GTPase domain XA08_RS04190 SM00865 Tubulin/FtsZ family, C-terminal domain XA08_RS04210 SM00957 SecA DEAD-like domain XA08_RS04210 SM00958 SecA preprotein cross-linking domain XA08_RS04240 SM00344 helix_turn_helix ASNC type XA08_RS04270 SM00955 XA08_RS04270 XA08_RS04300 SM00878 Biotin carboxylase C-terminal domain XA08_RS04380 SM00344 helix_turn_helix ASNC type XA08_RS04415 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS04415 SM00895 XA08_RS04415 XA08_RS04425 SM00487 DEAD-like helicases superfamily XA08_RS04425 SM00490 helicase superfamily c-terminal domain XA08_RS04445 SM00382 ATPases associated with a variety of cellular activities XA08_RS04485 SM00859 Semialdehyde dehydrogenase, NAD binding domain XA08_RS04515 SM00363 S4 RNA-binding domain XA08_RS04610 SM00387 Histidine kinase-like ATPases XA08_RS04615 SM00448 cheY-homologous receiver domain XA08_RS04640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XA08_RS04690 SM00257 Lysin motif XA08_RS04730 SM00528 Domain in histone-like proteins of HNS family XA08_RS04750 SM00912 haemagglutination activity domain XA08_RS04785 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS04805 SM01002 Alanine dehydrogenase/PNT, C-terminal domain XA08_RS04805 SM01003 Alanine dehydrogenase/PNT, N-terminal domain XA08_RS04875 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS04875 SM00895 XA08_RS04875 XA08_RS04915 SM00382 ATPases associated with a variety of cellular activities XA08_RS04930 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS04965 SM00382 ATPases associated with a variety of cellular activities XA08_RS04990 SM00248 ankyrin repeats XA08_RS05035 SM00344 helix_turn_helix ASNC type XA08_RS05060 SM00382 ATPases associated with a variety of cellular activities XA08_RS05075 SM00829 Enoylreductase XA08_RS05100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XA08_RS05125 SM00822 XA08_RS05125 XA08_RS05210 SM00822 XA08_RS05210 XA08_RS05235 SM00422 helix_turn_helix, mercury resistance XA08_RS05265 SM00382 ATPases associated with a variety of cellular activities XA08_RS05300 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS05300 SM00895 XA08_RS05300 XA08_RS05355 SM00382 ATPases associated with a variety of cellular activities XA08_RS05355 SM00930 XA08_RS05355 XA08_RS05410 SM00116 Domain in cystathionine beta-synthase and other proteins. XA08_RS05410 SM00924 MgtE intracellular N domain XA08_RS05440 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS05455 SM00861 Transketolase, pyrimidine binding domain XA08_RS05490 SM00382 ATPases associated with a variety of cellular activities XA08_RS05505 SM00670 Large family of predicted nucleotide-binding domains XA08_RS05590 SM00822 XA08_RS05590 XA08_RS05655 SM00357 Cold shock protein domain XA08_RS05665 SM01359 XA08_RS05665 XA08_RS05665 SM01360 XA08_RS05665 XA08_RS05675 SM00382 ATPases associated with a variety of cellular activities XA08_RS05675 SM01086 C-terminal, D2-small domain, of ClpB protein XA08_RS05720 SM00382 ATPases associated with a variety of cellular activities XA08_RS05725 SM00382 ATPases associated with a variety of cellular activities XA08_RS05745 SM00869 Autotransporter beta-domain XA08_RS05755 SM00938 Nitrogen regulatory protein P-II XA08_RS05825 SM00422 helix_turn_helix, mercury resistance XA08_RS05850 SM00729 Elongator protein 3, MiaB family, Radical SAM XA08_RS05850 SM00876 Biotin and Thiamin Synthesis associated domain XA08_RS05900 SM00852 Probable molybdopterin binding domain XA08_RS05905 SM00852 Probable molybdopterin binding domain XA08_RS05910 SM00729 Elongator protein 3, MiaB family, Radical SAM XA08_RS05945 SM00938 Nitrogen regulatory protein P-II XA08_RS06005 SM00479 XA08_RS06005 XA08_RS06105 SM01211 XA08_RS06105 XA08_RS06110 SM00912 haemagglutination activity domain XA08_RS06125 SM00347 helix_turn_helix multiple antibiotic resistance protein XA08_RS06130 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS06135 SM01007 Class II Aldolase and Adducin N-terminal domain XA08_RS06170 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS06175 SM01130 XA08_RS06175 XA08_RS06220 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS06230 SM00420 helix_turn_helix, Deoxyribose operon repressor XA08_RS06230 SM01134 XA08_RS06230 XA08_RS06235 SM00382 ATPases associated with a variety of cellular activities XA08_RS06240 SM00382 ATPases associated with a variety of cellular activities XA08_RS06275 SM00344 helix_turn_helix ASNC type XA08_RS06315 SM00869 Autotransporter beta-domain XA08_RS06325 SM00116 Domain in cystathionine beta-synthase and other proteins. XA08_RS06325 SM01240 XA08_RS06325 XA08_RS06340 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS06365 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS06380 SM00382 ATPases associated with a variety of cellular activities XA08_RS06425 SM00849 Metallo-beta-lactamase superfamily XA08_RS06425 SM01027 Beta-Casp domain XA08_RS06450 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS06470 SM00829 Enoylreductase XA08_RS06480 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS06520 SM00382 ATPases associated with a variety of cellular activities XA08_RS06525 SM00354 helix_turn _helix lactose operon repressor XA08_RS06585 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS06625 SM00873 B3/4 domain XA08_RS06625 SM00874 tRNA synthetase B5 domain XA08_RS06625 SM00896 Ferredoxin-fold anticodon binding domain XA08_RS06630 SM00411 bacterial (prokaryotic) histone like domain XA08_RS06635 SM00422 helix_turn_helix, mercury resistance XA08_RS06740 SM00822 XA08_RS06740 XA08_RS06755 SM00382 ATPases associated with a variety of cellular activities XA08_RS06770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS06770 SM00387 Histidine kinase-like ATPases XA08_RS06770 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS06775 SM00448 cheY-homologous receiver domain XA08_RS06775 SM00862 Transcriptional regulatory protein, C terminal XA08_RS06780 SM00382 ATPases associated with a variety of cellular activities XA08_RS06810 SM00881 CoA binding domain XA08_RS06880 SM00858 XA08_RS06880 XA08_RS06890 SM00240 Forkhead associated domain XA08_RS06890 SM00382 ATPases associated with a variety of cellular activities XA08_RS07040 SM00271 DnaJ molecular chaperone homology domain XA08_RS07065 SM00382 ATPases associated with a variety of cellular activities XA08_RS07090 SM01329 XA08_RS07090 XA08_RS07110 SM00448 cheY-homologous receiver domain XA08_RS07110 SM00862 Transcriptional regulatory protein, C terminal XA08_RS07165 SM00463 Small MutS-related domain XA08_RS07175 SM00843 XA08_RS07175 XA08_RS07185 SM00382 ATPases associated with a variety of cellular activities XA08_RS07215 SM00267 diguanylate cyclase XA08_RS07240 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS07260 SM01006 Siderophore biosynthesis protein domain XA08_RS07310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XA08_RS07310 SM00267 diguanylate cyclase XA08_RS07330 SM00421 helix_turn_helix, Lux Regulon XA08_RS07330 SM00448 cheY-homologous receiver domain XA08_RS07335 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XA08_RS07385 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS07400 SM00382 ATPases associated with a variety of cellular activities XA08_RS07420 SM00834 Putative regulatory protein XA08_RS07435 SM00421 helix_turn_helix, Lux Regulon XA08_RS07465 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS07480 SM01001 AIR carboxylase XA08_RS07495 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS07500 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS07510 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS07510 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. XA08_RS07520 SM00382 ATPases associated with a variety of cellular activities XA08_RS07610 SM00382 ATPases associated with a variety of cellular activities XA08_RS07620 SM00493 XA08_RS07620 XA08_RS07695 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XA08_RS07695 SM00534 ATPase domain of DNA mismatch repair MUTS family XA08_RS07700 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XA08_RS07715 SM01130 XA08_RS07715 XA08_RS07735 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS07735 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. XA08_RS07745 SM00382 ATPases associated with a variety of cellular activities XA08_RS07750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XA08_RS07750 SM00954 Region found in RelA / SpoT proteins XA08_RS07755 SM01409 XA08_RS07755 XA08_RS07760 SM00072 Guanylate kinase homologues. XA08_RS07775 SM00822 XA08_RS07775 XA08_RS07790 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS07825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XA08_RS07825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS07830 SM00052 Putative diguanylate phosphodiesterase XA08_RS07830 SM00267 diguanylate cyclase XA08_RS07845 SM00729 Elongator protein 3, MiaB family, Radical SAM XA08_RS07850 SM01230 XA08_RS07850 XA08_RS07855 SM00091 PAS domain XA08_RS07855 SM00387 Histidine kinase-like ATPases XA08_RS07855 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS07860 SM00382 ATPases associated with a variety of cellular activities XA08_RS07860 SM00448 cheY-homologous receiver domain XA08_RS07885 SM00382 ATPases associated with a variety of cellular activities XA08_RS07930 SM00487 DEAD-like helicases superfamily XA08_RS07930 SM00490 helicase superfamily c-terminal domain XA08_RS07980 SM00382 ATPases associated with a variety of cellular activities XA08_RS08005 SM00984 UDP binding domain XA08_RS08055 SM00382 ATPases associated with a variety of cellular activities XA08_RS08060 SM00382 ATPases associated with a variety of cellular activities XA08_RS08115 SM00327 von Willebrand factor (vWF) type A domain XA08_RS08120 SM00028 Tetratricopeptide repeats XA08_RS08120 SM00327 von Willebrand factor (vWF) type A domain XA08_RS08160 SM00421 helix_turn_helix, Lux Regulon XA08_RS08160 SM00448 cheY-homologous receiver domain XA08_RS08165 SM00869 Autotransporter beta-domain XA08_RS08170 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS08275 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XA08_RS08290 SM00822 XA08_RS08290 XA08_RS08390 SM00382 ATPases associated with a variety of cellular activities XA08_RS08395 SM00382 ATPases associated with a variety of cellular activities XA08_RS08475 SM00248 ankyrin repeats XA08_RS08480 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS08485 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS08485 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. XA08_RS08495 SM00382 ATPases associated with a variety of cellular activities XA08_RS08505 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XA08_RS08545 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS08545 SM00895 XA08_RS08545 XA08_RS08590 SM00052 Putative diguanylate phosphodiesterase XA08_RS08595 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS08595 SM00073 Histidine Phosphotransfer domain XA08_RS08595 SM00091 PAS domain XA08_RS08595 SM00387 Histidine kinase-like ATPases XA08_RS08595 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS08595 SM00448 cheY-homologous receiver domain XA08_RS08600 SM00421 helix_turn_helix, Lux Regulon XA08_RS08600 SM00448 cheY-homologous receiver domain XA08_RS08605 SM00912 haemagglutination activity domain XA08_RS08700 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS08720 SM01091 Transporter associated domain XA08_RS08740 SM00028 Tetratricopeptide repeats XA08_RS08745 SM00840 XA08_RS08745 XA08_RS08750 SM00478 endonuclease III XA08_RS08865 SM00382 ATPases associated with a variety of cellular activities XA08_RS08880 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS08885 SM00881 CoA binding domain XA08_RS08915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XA08_RS08940 SM00028 Tetratricopeptide repeats XA08_RS08955 SM00347 helix_turn_helix multiple antibiotic resistance protein XA08_RS08960 SM00421 helix_turn_helix, Lux Regulon XA08_RS08965 SM00421 helix_turn_helix, Lux Regulon XA08_RS09010 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS09030 SM00318 Staphylococcal nuclease homologues XA08_RS09050 SM00382 ATPases associated with a variety of cellular activities XA08_RS09055 SM00347 helix_turn_helix multiple antibiotic resistance protein XA08_RS09100 SM00858 XA08_RS09100 XA08_RS09130 SM00028 Tetratricopeptide repeats XA08_RS09145 SM00382 ATPases associated with a variety of cellular activities XA08_RS09175 SM00841 Elongation factor P, C-terminal XA08_RS09175 SM01185 XA08_RS09175 XA08_RS09235 SM00479 XA08_RS09235 XA08_RS09330 SM00869 Autotransporter beta-domain XA08_RS09360 SM01209 XA08_RS09360 XA08_RS09360 SM01210 XA08_RS09360 XA08_RS09425 SM00382 ATPases associated with a variety of cellular activities XA08_RS09445 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS09450 SM01329 XA08_RS09450 XA08_RS09470 SM00347 helix_turn_helix multiple antibiotic resistance protein XA08_RS09485 SM00829 Enoylreductase XA08_RS09500 SM00450 Rhodanese Homology Domain XA08_RS09515 SM00382 ATPases associated with a variety of cellular activities XA08_RS09560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XA08_RS09560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS09675 SM00382 ATPases associated with a variety of cellular activities XA08_RS09750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS09750 SM00331 Sigma factor PP2C-like phosphatases XA08_RS09750 SM01049 XA08_RS09750 XA08_RS09760 SM01005 Alanine racemase, C-terminal domain XA08_RS09775 SM00155 Phospholipase D. Active site motifs. XA08_RS09785 SM00869 Autotransporter beta-domain XA08_RS09820 SM00347 helix_turn_helix multiple antibiotic resistance protein XA08_RS09865 SM01207 XA08_RS09865 XA08_RS09880 SM00257 Lysin motif XA08_RS09905 SM00422 helix_turn_helix, mercury resistance XA08_RS09960 SM00749 bacterial OsmY and nodulation domain XA08_RS10025 SM00344 helix_turn_helix ASNC type XA08_RS10050 SM00904 Riboflavin kinase XA08_RS10080 SM00965 Secretin and TonB N terminus short domain XA08_RS10085 SM00382 ATPases associated with a variety of cellular activities XA08_RS10120 SM00869 Autotransporter beta-domain XA08_RS10135 SM00357 Cold shock protein domain XA08_RS10165 SM00382 ATPases associated with a variety of cellular activities XA08_RS10165 SM00994 ClpX C4-type zinc finger XA08_RS10165 SM01086 C-terminal, D2-small domain, of ClpB protein XA08_RS10170 SM00382 ATPases associated with a variety of cellular activities XA08_RS10170 SM00464 Found in ATP-dependent protease La (LON) XA08_RS10225 SM00882 Coenzyme A transferase XA08_RS10230 SM00882 Coenzyme A transferase XA08_RS10260 SM00869 Autotransporter beta-domain XA08_RS10275 SM00487 DEAD-like helicases superfamily XA08_RS10275 SM00490 helicase superfamily c-terminal domain XA08_RS10280 SM00226 Low molecular weight phosphatase family XA08_RS10305 SM00271 DnaJ molecular chaperone homology domain XA08_RS10360 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS10360 SM00866 XA08_RS10360 XA08_RS10420 SM00382 ATPases associated with a variety of cellular activities XA08_RS10470 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XA08_RS10520 SM00387 Histidine kinase-like ATPases XA08_RS10520 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS10525 SM00448 cheY-homologous receiver domain XA08_RS10540 SM00562 XA08_RS10540 XA08_RS10570 SM00564 beta-propeller repeat XA08_RS10575 SM00382 ATPases associated with a variety of cellular activities XA08_RS10595 SM00244 prohibitin homologues XA08_RS10600 SM00244 prohibitin homologues XA08_RS10610 SM00788 Adenylosuccinate synthetase XA08_RS10625 SM00400 zinc finger XA08_RS10625 SM00493 XA08_RS10625 XA08_RS10625 SM00766 DNA primase DnaG DnaB-binding XA08_RS10675 SM00382 ATPases associated with a variety of cellular activities XA08_RS10780 SM00382 ATPases associated with a variety of cellular activities XA08_RS10820 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS10840 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XA08_RS10855 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS10855 SM00895 XA08_RS10855 XA08_RS10875 SM00382 ATPases associated with a variety of cellular activities XA08_RS10910 SM00464 Found in ATP-dependent protease La (LON) XA08_RS10920 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS10930 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XA08_RS11025 SM00822 XA08_RS11025 XA08_RS11195 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XA08_RS11195 SM00465 GIY-YIG type nucleases (URI domain) XA08_RS11230 SM00862 Transcriptional regulatory protein, C terminal XA08_RS11250 SM00382 ATPases associated with a variety of cellular activities XA08_RS11290 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS11290 SM00895 XA08_RS11290 XA08_RS11310 SM00382 ATPases associated with a variety of cellular activities XA08_RS11365 SM00411 bacterial (prokaryotic) histone like domain XA08_RS11370 SM00347 helix_turn_helix multiple antibiotic resistance protein XA08_RS11460 SM00316 Ribosomal protein S1-like RNA-binding domain XA08_RS11480 SM00382 ATPases associated with a variety of cellular activities XA08_RS11535 SM00481 DNA polymerase alpha chain like domain XA08_RS11545 SM00382 ATPases associated with a variety of cellular activities XA08_RS11545 SM00487 DEAD-like helicases superfamily XA08_RS11545 SM00490 helicase superfamily c-terminal domain XA08_RS11545 SM00847 Helicase associated domain (HA2) Add an annotation XA08_RS11610 SM00382 ATPases associated with a variety of cellular activities XA08_RS11695 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS11695 SM00866 XA08_RS11695 XA08_RS11735 SM00981 XA08_RS11735 XA08_RS11790 SM00028 Tetratricopeptide repeats XA08_RS11790 SM00862 Transcriptional regulatory protein, C terminal XA08_RS11800 SM01192 XA08_RS11800 XA08_RS11800 SM01193 XA08_RS11800 XA08_RS11855 SM00382 ATPases associated with a variety of cellular activities XA08_RS11870 SM00882 Coenzyme A transferase XA08_RS12030 SM00358 Double-stranded RNA binding motif XA08_RS12030 SM00535 Ribonuclease III family XA08_RS12040 SM00838 Elongation factor G C-terminus XA08_RS12045 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XA08_RS12070 SM00825 Beta-ketoacyl synthase XA08_RS12080 SM00822 XA08_RS12080 XA08_RS12085 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XA08_RS12120 SM00644 XA08_RS12120 XA08_RS12180 SM00859 Semialdehyde dehydrogenase, NAD binding domain XA08_RS12185 SM01329 XA08_RS12185 XA08_RS12205 SM00382 ATPases associated with a variety of cellular activities XA08_RS12240 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XA08_RS12280 SM00852 Probable molybdopterin binding domain XA08_RS12300 SM00052 Putative diguanylate phosphodiesterase XA08_RS12320 SM00382 ATPases associated with a variety of cellular activities XA08_RS12330 SM00855 Phosphoglycerate mutase family XA08_RS12340 SM00851 MGS-like domain XA08_RS12340 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XA08_RS12345 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XA08_RS12415 SM00267 diguanylate cyclase XA08_RS12420 SM00244 prohibitin homologues XA08_RS12480 SM00935 Outer membrane protein (OmpH-like) XA08_RS12490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XA08_RS12535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XA08_RS12630 SM00382 ATPases associated with a variety of cellular activities XA08_RS12695 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XA08_RS12695 SM00091 PAS domain XA08_RS12695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XA08_RS12695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS12700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XA08_RS12700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS12705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XA08_RS12705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS12720 SM00047 Lysozyme subfamily 2 XA08_RS12765 SM00858 XA08_RS12765 XA08_RS12780 SM00382 ATPases associated with a variety of cellular activities XA08_RS12780 SM00962 SRP54-type protein, GTPase domain XA08_RS12800 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS12810 SM00382 ATPases associated with a variety of cellular activities XA08_RS12825 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XA08_RS12845 SM00354 helix_turn _helix lactose operon repressor XA08_RS12870 SM00881 CoA binding domain XA08_RS12875 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS12875 SM00895 XA08_RS12875 XA08_RS12900 SM00869 Autotransporter beta-domain XA08_RS12925 SM00155 Phospholipase D. Active site motifs. XA08_RS12970 SM00642 Alpha-amylase domain XA08_RS12975 SM00642 Alpha-amylase domain XA08_RS12980 SM00642 Alpha-amylase domain XA08_RS12985 SM00642 Alpha-amylase domain XA08_RS12990 SM00642 Alpha-amylase domain XA08_RS13000 SM00642 Alpha-amylase domain XA08_RS13020 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS13150 SM00953 XA08_RS13150 XA08_RS13185 SM00382 ATPases associated with a variety of cellular activities XA08_RS13235 SM00382 ATPases associated with a variety of cellular activities XA08_RS13240 SM00382 ATPases associated with a variety of cellular activities XA08_RS13275 SM00434 DNA Topoisomerase IV XA08_RS13285 SM00387 Histidine kinase-like ATPases XA08_RS13285 SM00433 TopoisomeraseII XA08_RS13295 SM00357 Cold shock protein domain XA08_RS13295 SM00382 ATPases associated with a variety of cellular activities XA08_RS13295 SM00959 Rho termination factor, N-terminal domain XA08_RS13335 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XA08_RS13335 SM00474 3'-5' exonuclease XA08_RS13335 SM00475 5'-3' exonuclease XA08_RS13335 SM00482 DNA polymerase A domain XA08_RS13375 SM00316 Ribosomal protein S1-like RNA-binding domain XA08_RS13385 SM00363 S4 RNA-binding domain XA08_RS13410 SM00833 Cobalamin synthesis protein cobW C-terminal domain XA08_RS13485 SM00382 ATPases associated with a variety of cellular activities XA08_RS13490 SM00327 von Willebrand factor (vWF) type A domain XA08_RS13515 SM01005 Alanine racemase, C-terminal domain XA08_RS13550 SM00382 ATPases associated with a variety of cellular activities XA08_RS13615 SM00869 Autotransporter beta-domain XA08_RS13620 SM00869 Autotransporter beta-domain XA08_RS13635 SM00382 ATPases associated with a variety of cellular activities XA08_RS13635 SM01086 C-terminal, D2-small domain, of ClpB protein XA08_RS13640 SM00100 Cyclic nucleotide-monophosphate binding domain XA08_RS13640 SM00419 helix_turn_helix, cAMP Regulatory protein XA08_RS13710 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS13725 SM00382 ATPases associated with a variety of cellular activities XA08_RS13790 SM01007 Class II Aldolase and Adducin N-terminal domain XA08_RS13815 SM00822 XA08_RS13815 XA08_RS13825 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XA08_RS13880 SM00822 XA08_RS13880 XA08_RS13895 SM00363 S4 RNA-binding domain XA08_RS13905 SM00491 XA08_RS13905 XA08_RS13910 SM00316 Ribosomal protein S1-like RNA-binding domain XA08_RS13910 SM00732 Likely ribonuclease with RNase H fold. XA08_RS13975 SM00861 Transketolase, pyrimidine binding domain XA08_RS13985 SM00344 helix_turn_helix ASNC type XA08_RS13995 SM00919 Malic enzyme, NAD binding domain XA08_RS13995 SM01274 XA08_RS13995 XA08_RS14015 SM00481 DNA polymerase alpha chain like domain XA08_RS14025 SM00849 Metallo-beta-lactamase superfamily XA08_RS14050 SM00869 Autotransporter beta-domain XA08_RS14060 SM00382 ATPases associated with a variety of cellular activities XA08_RS14085 SM00822 XA08_RS14085 XA08_RS14110 SM00382 ATPases associated with a variety of cellular activities XA08_RS14130 SM00382 ATPases associated with a variety of cellular activities XA08_RS14140 SM00052 Putative diguanylate phosphodiesterase XA08_RS14140 SM00267 diguanylate cyclase XA08_RS14140 SM00387 Histidine kinase-like ATPases XA08_RS14140 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS14145 SM00448 cheY-homologous receiver domain XA08_RS14145 SM00862 Transcriptional regulatory protein, C terminal XA08_RS14165 SM00116 Domain in cystathionine beta-synthase and other proteins. XA08_RS14205 SM01103 XA08_RS14205 XA08_RS14215 SM00382 ATPases associated with a variety of cellular activities XA08_RS14260 SM00382 ATPases associated with a variety of cellular activities XA08_RS14285 SM00919 Malic enzyme, NAD binding domain XA08_RS14285 SM01274 XA08_RS14285 XA08_RS14335 SM00869 Autotransporter beta-domain XA08_RS14365 SM01323 XA08_RS14365 XA08_RS14390 SM00729 Elongator protein 3, MiaB family, Radical SAM XA08_RS14405 SM01091 Transporter associated domain XA08_RS14445 SM00448 cheY-homologous receiver domain XA08_RS14450 SM00448 cheY-homologous receiver domain XA08_RS14460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XA08_RS14460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS14465 SM00260 Two component signalling adaptor domain XA08_RS14470 SM00073 Histidine Phosphotransfer domain XA08_RS14470 SM00260 Two component signalling adaptor domain XA08_RS14470 SM00387 Histidine kinase-like ATPases XA08_RS14470 SM01231 XA08_RS14470 XA08_RS14475 SM00448 cheY-homologous receiver domain XA08_RS14510 SM00316 Ribosomal protein S1-like RNA-binding domain XA08_RS14530 SM00852 Probable molybdopterin binding domain XA08_RS14550 SM00271 DnaJ molecular chaperone homology domain XA08_RS14605 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XA08_RS14610 SM00861 Transketolase, pyrimidine binding domain XA08_RS14645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XA08_RS14645 SM00091 PAS domain XA08_RS14645 SM00387 Histidine kinase-like ATPases XA08_RS14645 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS14650 SM00421 helix_turn_helix, Lux Regulon XA08_RS14650 SM00448 cheY-homologous receiver domain XA08_RS14695 SM00363 S4 RNA-binding domain XA08_RS14745 SM00729 Elongator protein 3, MiaB family, Radical SAM XA08_RS14760 SM00382 ATPases associated with a variety of cellular activities XA08_RS14795 SM00893 Electron transfer flavoprotein domain XA08_RS14800 SM00893 Electron transfer flavoprotein domain XA08_RS14850 SM00411 bacterial (prokaryotic) histone like domain XA08_RS14855 SM00316 Ribosomal protein S1-like RNA-binding domain XA08_RS14875 SM00830 Chorismate mutase type II XA08_RS14885 SM00434 DNA Topoisomerase IV XA08_RS14995 SM00382 ATPases associated with a variety of cellular activities XA08_RS15045 SM00878 Biotin carboxylase C-terminal domain XA08_RS15050 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS15050 SM00866 XA08_RS15050 XA08_RS15130 SM00382 ATPases associated with a variety of cellular activities XA08_RS15175 SM01387 XA08_RS15175 XA08_RS15180 SM00316 Ribosomal protein S1-like RNA-binding domain XA08_RS15180 SM00322 K homology RNA-binding domain XA08_RS15210 SM00829 Enoylreductase XA08_RS15235 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS15295 SM00450 Rhodanese Homology Domain XA08_RS15320 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS15380 SM00014 Acid phosphatase homologues XA08_RS15440 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XA08_RS15445 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XA08_RS15530 SM00487 DEAD-like helicases superfamily XA08_RS15530 SM00490 helicase superfamily c-terminal domain XA08_RS15530 SM00982 XA08_RS15530 XA08_RS15530 SM01058 CarD-like/TRCF domain XA08_RS15590 SM00382 ATPases associated with a variety of cellular activities XA08_RS15610 SM00829 Enoylreductase XA08_RS15615 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS15615 SM00895 XA08_RS15615 XA08_RS15620 SM00869 Autotransporter beta-domain XA08_RS15625 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS15625 SM00895 XA08_RS15625 XA08_RS15655 SM00382 ATPases associated with a variety of cellular activities XA08_RS15670 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS15690 SM00382 ATPases associated with a variety of cellular activities XA08_RS15770 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XA08_RS15775 SM00862 Transcriptional regulatory protein, C terminal XA08_RS15780 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS15795 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS15820 SM00965 Secretin and TonB N terminus short domain XA08_RS15825 SM00867 YceI-like domain XA08_RS15855 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS15875 SM00382 ATPases associated with a variety of cellular activities XA08_RS15940 SM00650 Ribosomal RNA adenine dimethylases XA08_RS15990 SM00382 ATPases associated with a variety of cellular activities XA08_RS16045 SM00448 cheY-homologous receiver domain XA08_RS16045 SM00862 Transcriptional regulatory protein, C terminal XA08_RS16285 SM00382 ATPases associated with a variety of cellular activities XA08_RS16290 SM00382 ATPases associated with a variety of cellular activities XA08_RS16315 SM00947 Carbonic anhydrase XA08_RS16330 SM00341 Helicase and RNase D C-terminal XA08_RS16330 SM00487 DEAD-like helicases superfamily XA08_RS16330 SM00490 helicase superfamily c-terminal domain XA08_RS16330 SM00956 XA08_RS16330 XA08_RS16335 SM00382 ATPases associated with a variety of cellular activities XA08_RS16350 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XA08_RS16360 SM00798 AICARFT/IMPCHase bienzyme XA08_RS16360 SM00851 MGS-like domain XA08_RS16385 SM01011 Aminopeptidase P, N-terminal domain XA08_RS16460 SM00487 DEAD-like helicases superfamily XA08_RS16460 SM00490 helicase superfamily c-terminal domain XA08_RS16480 SM00852 Probable molybdopterin binding domain XA08_RS16485 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS16565 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS16565 SM00895 XA08_RS16565 XA08_RS16585 SM00919 Malic enzyme, NAD binding domain XA08_RS16585 SM01274 XA08_RS16585 XA08_RS16605 SM00382 ATPases associated with a variety of cellular activities XA08_RS16635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XA08_RS16670 SM00382 ATPases associated with a variety of cellular activities XA08_RS16670 SM00962 SRP54-type protein, GTPase domain XA08_RS16670 SM00963 SRP54-type protein, helical bundle domain XA08_RS16710 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS16750 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XA08_RS16770 SM00869 Autotransporter beta-domain XA08_RS16780 SM00883 Chaperonin 10 Kd subunit XA08_RS16830 SM00267 diguanylate cyclase XA08_RS16835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XA08_RS16880 SM00155 Phospholipase D. Active site motifs. XA08_RS16915 SM01144 XA08_RS16915 XA08_RS16925 SM00316 Ribosomal protein S1-like RNA-binding domain XA08_RS16925 SM00357 Cold shock protein domain XA08_RS16925 SM00955 XA08_RS16925 XA08_RS16930 SM00967 RNA 2'-O ribose methyltransferase substrate binding XA08_RS16940 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XA08_RS16945 SM00411 bacterial (prokaryotic) histone like domain XA08_RS16970 SM00448 cheY-homologous receiver domain XA08_RS16970 SM00862 Transcriptional regulatory protein, C terminal XA08_RS16975 SM00387 Histidine kinase-like ATPases XA08_RS16975 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS17030 SM01130 XA08_RS17030 XA08_RS17035 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS17035 SM00895 XA08_RS17035 XA08_RS17050 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS17065 SM00387 Histidine kinase-like ATPases XA08_RS17065 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS17075 SM00448 cheY-homologous receiver domain XA08_RS17075 SM00862 Transcriptional regulatory protein, C terminal XA08_RS17085 SM00986 Uracil DNA glycosylase superfamily XA08_RS17085 SM00987 UreE urease accessory protein, C-terminal domain XA08_RS17095 SM00968 SMC proteins Flexible Hinge Domain XA08_RS17100 SM00771 ZipA, C-terminal domain (FtsZ-binding) XA08_RS17105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XA08_RS17105 SM00292 breast cancer carboxy-terminal domain XA08_RS17105 SM00532 Ligase N family XA08_RS17130 SM00382 ATPases associated with a variety of cellular activities XA08_RS17155 SM00382 ATPases associated with a variety of cellular activities XA08_RS17185 SM00382 ATPases associated with a variety of cellular activities XA08_RS17190 SM00382 ATPases associated with a variety of cellular activities XA08_RS17195 SM00478 endonuclease III XA08_RS17195 SM00525 XA08_RS17195 XA08_RS17240 SM00954 Region found in RelA / SpoT proteins XA08_RS17280 SM00316 Ribosomal protein S1-like RNA-binding domain XA08_RS17285 SM00363 S4 RNA-binding domain XA08_RS17350 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XA08_RS17365 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS17365 SM00895 XA08_RS17365 XA08_RS17375 SM00357 Cold shock protein domain XA08_RS17445 SM00838 Elongation factor G C-terminus XA08_RS17445 SM00889 Elongation factor G, domain IV XA08_RS17450 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS17475 SM01130 XA08_RS17475 XA08_RS17535 SM00881 CoA binding domain XA08_RS17540 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS17550 SM00861 Transketolase, pyrimidine binding domain XA08_RS17590 SM00382 ATPases associated with a variety of cellular activities XA08_RS17595 SM00382 ATPases associated with a variety of cellular activities XA08_RS17625 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS17645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XA08_RS17645 SM00245 tail specific protease XA08_RS17655 SM00855 Phosphoglycerate mutase family XA08_RS17660 SM00450 Rhodanese Homology Domain XA08_RS17720 SM00382 ATPases associated with a variety of cellular activities XA08_RS17740 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XA08_RS17805 SM00347 helix_turn_helix multiple antibiotic resistance protein XA08_RS17820 SM00448 cheY-homologous receiver domain XA08_RS17825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XA08_RS17825 SM00387 Histidine kinase-like ATPases XA08_RS17825 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS17900 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS17920 SM00344 helix_turn_helix ASNC type XA08_RS17975 SM00729 Elongator protein 3, MiaB family, Radical SAM XA08_RS17995 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS17995 SM00895 XA08_RS17995 XA08_RS18035 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS18055 SM00869 Autotransporter beta-domain XA08_RS18085 SM01119 XA08_RS18085 XA08_RS18095 SM00244 prohibitin homologues XA08_RS18190 SM00387 Histidine kinase-like ATPases XA08_RS18190 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS18225 SM01234 XA08_RS18225 XA08_RS18240 SM00382 ATPases associated with a variety of cellular activities XA08_RS18240 SM00760 Bacterial dnaA protein helix-turn-helix domain XA08_RS18245 SM00480 DNA polymerase III beta subunit XA08_RS18250 SM00387 Histidine kinase-like ATPases XA08_RS18250 SM00433 TopoisomeraseII XA08_RS18255 SM00346 helix_turn_helix isocitrate lyase regulation XA08_RS18280 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS18280 SM00871 Bacterial transcription activator, effector binding domain XA08_RS18300 SM00422 helix_turn_helix, mercury resistance XA08_RS18305 SM00849 Metallo-beta-lactamase superfamily XA08_RS18335 SM00878 Biotin carboxylase C-terminal domain XA08_RS18335 SM01209 XA08_RS18335 XA08_RS18355 SM01119 XA08_RS18355 XA08_RS18390 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XA08_RS18390 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XA08_RS18390 SM00493 XA08_RS18390 XA08_RS18400 SM00382 ATPases associated with a variety of cellular activities XA08_RS18430 SM00344 helix_turn_helix ASNC type XA08_RS18440 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain XA08_RS18460 SM01018 B12 binding domain XA08_RS18540 SM00838 Elongation factor G C-terminus XA08_RS18540 SM00889 Elongation factor G, domain IV XA08_RS18550 SM01403 XA08_RS18550 XA08_RS18570 SM01382 XA08_RS18570 XA08_RS18570 SM01383 XA08_RS18570 XA08_RS18585 SM00322 K homology RNA-binding domain XA08_RS18620 SM01374 XA08_RS18620 XA08_RS18695 SM00363 S4 RNA-binding domain XA08_RS18695 SM01390 XA08_RS18695 XA08_RS18700 SM00662 RNA polymerases D XA08_RS18730 SM01004 Delta-aminolevulinic acid dehydratase XA08_RS18765 SM01219 XA08_RS18765 XA08_RS18785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XA08_RS18835 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS18835 SM00866 XA08_RS18835 XA08_RS18880 SM00382 ATPases associated with a variety of cellular activities XA08_RS18905 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS18905 SM00895 XA08_RS18905 XA08_RS18935 SM01130 XA08_RS18935 XA08_RS18950 SM00257 Lysin motif XA08_RS19005 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS19015 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS19020 SM00345 helix_turn_helix gluconate operon transcriptional repressor XA08_RS19035 SM00382 ATPases associated with a variety of cellular activities XA08_RS19050 SM00829 Enoylreductase XA08_RS19100 SM00382 ATPases associated with a variety of cellular activities XA08_RS19150 SM00984 UDP binding domain XA08_RS19240 SM00100 Cyclic nucleotide-monophosphate binding domain XA08_RS19265 SM00829 Enoylreductase XA08_RS19295 SM00382 ATPases associated with a variety of cellular activities XA08_RS19405 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS19495 SM00342 helix_turn_helix, arabinose operon control protein XA08_RS19605 SM00421 helix_turn_helix, Lux Regulon XA08_RS19645 SM00382 ATPases associated with a variety of cellular activities XA08_RS19660 SM00062 Bacterial periplasmic substrate-binding proteins XA08_RS19665 SM00382 ATPases associated with a variety of cellular activities XA08_RS19685 SM00478 endonuclease III XA08_RS19690 SM00530 Helix-turn-helix XRE-family like proteins XA08_RS19765 SM01060 XA08_RS19765 XA08_RS19775 SM00382 ATPases associated with a variety of cellular activities XA08_RS19800 SM00382 ATPases associated with a variety of cellular activities XA08_RS19805 SM00382 ATPases associated with a variety of cellular activities XA08_RS19835 SM00448 cheY-homologous receiver domain XA08_RS19835 SM00862 Transcriptional regulatory protein, C terminal XA08_RS19840 SM00387 Histidine kinase-like ATPases XA08_RS19840 SM00388 His Kinase A (phosphoacceptor) domain XA08_RS19865 SM00357 Cold shock protein domain