locus-tag	class	description
ABB89_RS00005	COG0445	tRNA wobble uridine modification
ABB89_RS00010	COG0357	Ribosomal RNA small subunit methyltransferase G
ABB89_RS00015	COG1192	Involved in chromosome partitioning
ABB89_RS00025	COG1475	DNA binding
ABB89_RS00030	COG0252	asparaginase activity
ABB89_RS00055	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABB89_RS00065	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABB89_RS00075	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABB89_RS00080	COG0081	regulation of translation
ABB89_RS00085	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABB89_RS00090	COG0222	ribosome binding
ABB89_RS00095	COG0085	RNA polymerase activity
ABB89_RS00100	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABB89_RS00140	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS00165	COG1024	Enoyl-CoA hydratase
ABB89_RS00185	COG0752	glycyl-tRNA synthetase alpha subunit
ABB89_RS00190	COG0751	glycine-tRNA ligase activity
ABB89_RS00195	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ABB89_RS00200	COG0204	Acyl-transferase
ABB89_RS00215	COG0242	peptide deformylase activity
ABB89_RS00250	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ABB89_RS00255	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABB89_RS00260	COG2813	Specifically methylates the guanine in position
ABB89_RS00260	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABB89_RS00275	COG2223	nitrite transmembrane transporter activity
ABB89_RS00285	COG1794	racemase activity, acting on amino acids and derivatives
ABB89_RS00290	COG1126	abc transporter atp-binding protein
ABB89_RS00295	COG0765	amino acid transport
ABB89_RS00300	COG0765	amino acid transport
ABB89_RS00305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS00370	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB89_RS00400	COG0326	Molecular chaperone. Has ATPase activity
ABB89_RS00405	COG0625	glutathione transferase activity
ABB89_RS00420	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABB89_RS00425	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABB89_RS00455	COG0438	transferase activity, transferring glycosyl groups
ABB89_RS00460	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABB89_RS00465	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABB89_RS00495	COG0859	PFAM glycosyl transferase family 9
ABB89_RS00510	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ABB89_RS00520	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABB89_RS00525	COG1127	ABC transporter
ABB89_RS00545	COG1686	Belongs to the peptidase S11 family
ABB89_RS00555	COG2921	Belongs to the UPF0250 family
ABB89_RS00560	COG0321	lipoyl(octanoyl) transferase activity
ABB89_RS00565	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABB89_RS00600	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABB89_RS00610	COG0018	arginyl-trna synthetase
ABB89_RS00630	COG0395	ABC-type sugar transport system, permease component
ABB89_RS00635	COG1175	transmembrane transport
ABB89_RS00640	COG1653	transport
ABB89_RS00645	COG3842	ATPase activity
ABB89_RS00650	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABB89_RS00660	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABB89_RS00680	COG1609	Transcriptional regulator
ABB89_RS00690	COG0154	amidase activity
ABB89_RS00695	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABB89_RS00705	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ABB89_RS00715	COG0583	DNA-binding transcription factor activity
ABB89_RS00730	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB89_RS00735	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABB89_RS00750	COG1802	Transcriptional regulator
ABB89_RS00765	COG1024	Enoyl-CoA hydratase
ABB89_RS00775	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS00790	COG1984	allophanate hydrolase subunit 2
ABB89_RS00795	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ABB89_RS00805	COG0583	DNA-binding transcription factor activity
ABB89_RS00810	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABB89_RS00820	COG5002	protein histidine kinase activity
ABB89_RS00830	COG5002	protein histidine kinase activity
ABB89_RS00835	COG0745	RESPONSE REGULATOR receiver
ABB89_RS00840	COG2226	methyltransferase
ABB89_RS00855	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABB89_RS00875	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABB89_RS00885	COG0513	Belongs to the DEAD box helicase family
ABB89_RS00890	COG1280	lysine exporter protein (LysE YggA)
ABB89_RS00895	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABB89_RS00930	COG1054	Belongs to the UPF0176 family
ABB89_RS00935	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABB89_RS00935	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABB89_RS00945	COG0489	protein tyrosine kinase activity
ABB89_RS00960	COG0717	Belongs to the dCTP deaminase family
ABB89_RS00990	COG2081	HI0933 family
ABB89_RS01000	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABB89_RS01010	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ABB89_RS01015	COG0509	glycine decarboxylation via glycine cleavage system
ABB89_RS01020	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABB89_RS01020	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABB89_RS01060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABB89_RS01075	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABB89_RS01085	COG1414	Transcriptional regulator
ABB89_RS01090	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS01095	COG2031	fatty acid transporter
ABB89_RS01100	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB89_RS01110	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
ABB89_RS01115	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABB89_RS01125	COG4257	antibiotic catabolic process
ABB89_RS01150	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS01155	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ABB89_RS01160	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABB89_RS01185	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS01195	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABB89_RS01210	COG2188	Transcriptional regulator
ABB89_RS01215	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB89_RS01240	COG0617	tRNA 3'-terminal CCA addition
ABB89_RS01255	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ABB89_RS01260	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABB89_RS01265	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABB89_RS01270	COG0586	Pfam SNARE associated Golgi protein
ABB89_RS01275	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABB89_RS01280	COG0802	atpase or kinase
ABB89_RS01285	COG0114	fumarate hydratase activity
ABB89_RS01295	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS01305	COG0405	Gamma-glutamyltransferase
ABB89_RS01310	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS01320	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS01345	COG1294	oxidase, subunit
ABB89_RS01355	COG4988	ABC transporter
ABB89_RS01360	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ABB89_RS01365	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABB89_RS01380	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB89_RS01410	COG2969	positive regulation of protein catabolic process
ABB89_RS01415	COG0625	glutathione transferase activity
ABB89_RS01420	COG2857	Cytochrome c1
ABB89_RS01425	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ABB89_RS01430	COG0723	plastoquinol--plastocyanin reductase activity
ABB89_RS01435	COG1970	mechanosensitive ion channel activity
ABB89_RS01440	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABB89_RS01455	COG2808	Putative FMN-binding domain
ABB89_RS01460	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABB89_RS01465	COG0747	negative chemotaxis
ABB89_RS01470	COG0657	acetylesterase activity
ABB89_RS01480	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABB89_RS01485	COG2207	Transcriptional regulator
ABB89_RS01490	COG0129	dihydroxy-acid dehydratase activity
ABB89_RS01495	COG2814	Major facilitator Superfamily
ABB89_RS01500	COG0583	DNA-binding transcription factor activity
ABB89_RS01510	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
ABB89_RS01580	COG1024	Enoyl-CoA hydratase
ABB89_RS01585	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS01610	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ABB89_RS01615	COG0352	thiamine-phosphate diphosphorylase activity
ABB89_RS01630	COG1678	Uncharacterized ACR, COG1678
ABB89_RS01635	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABB89_RS01640	COG0540	Belongs to the ATCase OTCase family
ABB89_RS01655	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABB89_RS01665	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABB89_RS01700	COG1234	tRNA 3'-trailer cleavage
ABB89_RS01720	COG3064	Membrane
ABB89_RS01750	COG1683	Conserved Protein
ABB89_RS01755	COG1120	ATPase activity
ABB89_RS01760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABB89_RS01765	COG4558	Periplasmic binding protein
ABB89_RS01770	COG3720	iron ion transport
ABB89_RS01780	COG3712	iron ion homeostasis
ABB89_RS01785	COG1595	DNA-templated transcription, initiation
ABB89_RS01820	COG1802	Transcriptional regulator
ABB89_RS01830	COG3069	C4-dicarboxylate transmembrane transporter activity
ABB89_RS01840	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS01875	COG2860	membrane
ABB89_RS01880	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABB89_RS01885	COG0708	Exodeoxyribonuclease III
ABB89_RS01890	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABB89_RS01895	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABB89_RS01900	COG0154	amidase activity
ABB89_RS01905	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABB89_RS01910	COG1077	Cell shape determining protein MreB Mrl
ABB89_RS01915	COG1792	Involved in formation and maintenance of cell shape
ABB89_RS01925	COG0768	penicillin binding
ABB89_RS01930	COG0772	Belongs to the SEDS family
ABB89_RS01935	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ABB89_RS01940	COG0471	metal ion transport
ABB89_RS01945	COG1309	transcriptional regulator
ABB89_RS01955	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABB89_RS01970	COG2823	Periplasmic or secreted lipoprotein
ABB89_RS01975	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
ABB89_RS01990	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABB89_RS02010	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS02020	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS02040	COG0492	ferredoxin-NADP+ reductase activity
ABB89_RS02050	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS02055	COG1024	Enoyl-CoA hydratase
ABB89_RS02055	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB89_RS02060	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS02065	COG0028	Belongs to the TPP enzyme family
ABB89_RS02090	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS02100	COG0697	spore germination
ABB89_RS02130	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ABB89_RS02135	COG0463	Glycosyl transferase, family 2
ABB89_RS02155	COG0786	glutamate:sodium symporter activity
ABB89_RS02165	COG2031	fatty acid transporter
ABB89_RS02180	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABB89_RS02185	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABB89_RS02195	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABB89_RS02210	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB89_RS02220	COG1285	pathogenesis
ABB89_RS02225	COG1253	flavin adenine dinucleotide binding
ABB89_RS02230	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS02235	COG1024	Enoyl-CoA hydratase
ABB89_RS02240	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS02245	COG0583	DNA-binding transcription factor activity
ABB89_RS02250	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS02260	COG0183	Belongs to the thiolase family
ABB89_RS02280	COG0583	DNA-binding transcription factor activity
ABB89_RS02285	COG1278	Cold shock
ABB89_RS02295	COG1802	Transcriptional regulator
ABB89_RS02300	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS02305	COG2031	fatty acid transporter
ABB89_RS02310	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABB89_RS02310	COG1017	nitric oxide dioxygenase activity
ABB89_RS02315	COG0251	oxidation-reduction process
ABB89_RS02335	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS02345	COG0583	DNA-binding transcription factor activity
ABB89_RS02350	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS02360	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
ABB89_RS02365	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ABB89_RS02370	COG0546	phosphoglycolate phosphatase activity
ABB89_RS02380	COG1530	ribonuclease E activity
ABB89_RS02395	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABB89_RS02400	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABB89_RS02405	COG0159	tryptophan synthase activity
ABB89_RS02410	COG0133	tryptophan synthase activity
ABB89_RS02420	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABB89_RS02425	COG3228	Belongs to the MtfA family
ABB89_RS02435	COG0251	oxidation-reduction process
ABB89_RS02440	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ABB89_RS02445	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABB89_RS02460	COG2878	Part of a membrane complex involved in electron transport
ABB89_RS02465	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABB89_RS02500	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABB89_RS02520	COG1268	BioY protein
ABB89_RS02525	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ABB89_RS02530	COG1122	ATPase activity
ABB89_RS02535	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABB89_RS02550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABB89_RS02555	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABB89_RS02565	COG1196	nuclear chromosome segregation
ABB89_RS02570	COG0477	Major facilitator Superfamily
ABB89_RS02575	COG1573	uracil-dna glycosylase
ABB89_RS02580	COG1214	PFAM Peptidase M22, glycoprotease
ABB89_RS02605	COG0450	alkyl hydroperoxide reductase
ABB89_RS02610	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABB89_RS02620	COG2223	nitrite transmembrane transporter activity
ABB89_RS02630	COG2186	Transcriptional regulator
ABB89_RS02650	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABB89_RS02660	COG0583	DNA-binding transcription factor activity
ABB89_RS02670	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABB89_RS02675	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABB89_RS02680	COG0137	argininosuccinate synthase activity
ABB89_RS02685	COG3158	transport of potassium into the cell
ABB89_RS02690	COG0642	Histidine kinase
ABB89_RS02720	COG0776	regulation of translation
ABB89_RS02725	COG3128	pkhd-type hydroxylase
ABB89_RS02735	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABB89_RS02740	COG0557	exoribonuclease II activity
ABB89_RS02765	COG0679	Auxin Efflux Carrier
ABB89_RS02770	COG2391	methyltransferase activity
ABB89_RS02775	COG0069	glutamate synthase activity
ABB89_RS02785	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB89_RS02795	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ABB89_RS02800	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABB89_RS02835	COG3706	GGDEF domain
ABB89_RS02850	COG1053	succinate dehydrogenase
ABB89_RS02855	COG0583	DNA-binding transcription factor activity
ABB89_RS02865	COG1053	succinate dehydrogenase
ABB89_RS02885	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ABB89_RS02890	COG0459	protein refolding
ABB89_RS02895	COG3468	outer membrane autotransporter barrel domain protein
ABB89_RS02910	COG1252	NADH dehydrogenase
ABB89_RS02915	COG0284	orotidine-5'-phosphate decarboxylase activity
ABB89_RS02920	COG1546	Belongs to the CinA family
ABB89_RS02920	COG1058	Belongs to the CinA family
ABB89_RS02925	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABB89_RS02935	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABB89_RS02940	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ABB89_RS02975	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ABB89_RS02980	COG3639	organic phosphonate transmembrane transporter activity
ABB89_RS02985	COG3639	organic phosphonate transmembrane transporter activity
ABB89_RS03005	COG0742	ribosomal rna small subunit methyltransferase
ABB89_RS03010	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABB89_RS03015	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABB89_RS03020	COG3135	benzoate transporter
ABB89_RS03035	COG0640	Transcriptional regulator
ABB89_RS03065	COG4172	Belongs to the ABC transporter superfamily
ABB89_RS03070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS03075	COG0601	transmembrane transport
ABB89_RS03085	COG0281	malic enzyme
ABB89_RS03085	COG0280	phosphate acetyltransferase
ABB89_RS03145	COG0583	DNA-binding transcription factor activity
ABB89_RS03155	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABB89_RS03160	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ABB89_RS03165	COG0167	dihydroorotate dehydrogenase activity
ABB89_RS03185	COG1414	Transcriptional regulator
ABB89_RS03190	COG1058	Belongs to the CinA family
ABB89_RS03190	COG1546	Belongs to the CinA family
ABB89_RS03210	COG0513	Belongs to the DEAD box helicase family
ABB89_RS03240	COG0429	hydrolase of the alpha beta-hydrolase fold
ABB89_RS03245	COG4783	chaperone-mediated protein folding
ABB89_RS03260	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB89_RS03285	COG0006	proline dipeptidase activity
ABB89_RS03295	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABB89_RS03315	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ABB89_RS03320	COG0632	four-way junction helicase activity
ABB89_RS03335	COG2255	four-way junction helicase activity
ABB89_RS03340	COG0514	ATP-dependent DNA helicase (RecQ)
ABB89_RS03355	COG0288	reversible hydration of carbon dioxide
ABB89_RS03360	COG0154	amidase activity
ABB89_RS03370	COG4211	Belongs to the binding-protein-dependent transport system permease family
ABB89_RS03400	COG1464	Belongs to the NlpA lipoprotein family
ABB89_RS03545	COG1196	nuclear chromosome segregation
ABB89_RS03615	COG2135	peptidase activity
ABB89_RS03630	COG0494	nUDIX hydrolase
ABB89_RS03635	COG0442	prolyl-tRNA aminoacylation
ABB89_RS03640	COG0824	Thioesterase
ABB89_RS03645	COG0811	peptide transport
ABB89_RS03650	COG0848	biopolymer transport protein
ABB89_RS03660	COG0823	Involved in the tonB-independent uptake of proteins
ABB89_RS03675	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABB89_RS03680	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ABB89_RS03715	COG0700	Nucleoside recognition
ABB89_RS03720	COG0469	pyruvate kinase activity
ABB89_RS03725	COG1929	Belongs to the glycerate kinase type-1 family
ABB89_RS03730	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABB89_RS03735	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABB89_RS03740	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ABB89_RS03750	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABB89_RS03760	COG2154	pterin-4-alpha-carbinolamine dehydratase
ABB89_RS03785	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABB89_RS03790	COG0154	amidase activity
ABB89_RS03800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS03805	COG0601	transmembrane transport
ABB89_RS03810	COG0747	negative chemotaxis
ABB89_RS03830	COG0019	diaminopimelate decarboxylase activity
ABB89_RS03845	COG2353	YceI-like domain
ABB89_RS03850	COG4774	siderophore transport
ABB89_RS03855	COG3712	iron ion homeostasis
ABB89_RS03895	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ABB89_RS03900	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABB89_RS03905	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ABB89_RS03910	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABB89_RS03920	COG0142	geranyltranstransferase activity
ABB89_RS03930	COG0583	DNA-binding transcription factor activity
ABB89_RS03940	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
ABB89_RS03945	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS03960	COG2994	toxin metabolic process
ABB89_RS03970	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
ABB89_RS03975	COG2274	protein secretion by the type I secretion system
ABB89_RS03980	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABB89_RS03985	COG1538	Outer membrane efflux protein
ABB89_RS04000	COG0765	amino acid transport
ABB89_RS04005	COG0765	amino acid transport
ABB89_RS04010	COG1126	abc transporter atp-binding protein
ABB89_RS04030	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS04040	COG1802	Transcriptional regulator
ABB89_RS04050	COG1802	Transcriptional regulator
ABB89_RS04060	COG0318	PFAM AMP-dependent synthetase and ligase
ABB89_RS04070	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS04090	COG0028	Belongs to the TPP enzyme family
ABB89_RS04110	COG0308	aminopeptidase N
ABB89_RS04115	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
ABB89_RS04125	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABB89_RS04130	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ABB89_RS04135	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABB89_RS04140	COG0560	Phosphoserine phosphatase
ABB89_RS04145	COG0583	DNA-binding transcription factor activity
ABB89_RS04150	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS04155	COG0028	Belongs to the TPP enzyme family
ABB89_RS04170	COG4774	siderophore transport
ABB89_RS04175	COG4774	siderophore transport
ABB89_RS04185	COG1007	ATP synthesis coupled electron transport
ABB89_RS04200	COG0713	ATP synthesis coupled electron transport
ABB89_RS04210	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABB89_RS04215	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ABB89_RS04220	COG1034	ATP synthesis coupled electron transport
ABB89_RS04230	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ABB89_RS04235	COG0649	NAD binding
ABB89_RS04240	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABB89_RS04245	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABB89_RS04250	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABB89_RS04255	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB89_RS04285	COG0671	phosphoesterase, PA-phosphatase related
ABB89_RS04295	COG1597	lipid kinase activity
ABB89_RS04300	COG0583	DNA-binding transcription factor activity
ABB89_RS04305	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABB89_RS04315	COG1733	regulation of RNA biosynthetic process
ABB89_RS04320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABB89_RS04325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABB89_RS04340	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
ABB89_RS04360	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS04380	COG3608	succinylglutamate desuccinylase aspartoacylase
ABB89_RS04385	COG0626	cystathionine gamma-synthase activity
ABB89_RS04390	COG0583	DNA-binding transcription factor activity
ABB89_RS04425	COG3799	methylaspartate ammonia-lyase activity
ABB89_RS04435	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABB89_RS04445	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABB89_RS04450	COG0149	triose-phosphate isomerase activity
ABB89_RS04470	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABB89_RS04485	COG1185	polyribonucleotide nucleotidyltransferase activity
ABB89_RS04490	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ABB89_RS04505	COG1183	phosphatidylcholine synthase activity
ABB89_RS04510	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ABB89_RS04515	COG0440	acetolactate synthase activity
ABB89_RS04520	COG0028	Belongs to the TPP enzyme family
ABB89_RS04535	COG5265	(ABC) transporter
ABB89_RS04540	COG0500	methyltransferase
ABB89_RS04560	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
ABB89_RS04580	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
ABB89_RS04590	COG0511	ligase activity, forming carbon-carbon bonds
ABB89_RS04615	COG2188	Transcriptional regulator
ABB89_RS04620	COG0439	Biotin carboxylase
ABB89_RS04625	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABB89_RS04670	COG5265	(ABC) transporter
ABB89_RS04680	COG0667	Aldo Keto reductase
ABB89_RS04695	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABB89_RS04735	COG0583	DNA-binding transcription factor activity
ABB89_RS04760	COG2814	Major facilitator Superfamily
ABB89_RS04770	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ABB89_RS04785	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ABB89_RS04795	COG0287	Prephenate dehydrogenase
ABB89_RS04800	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABB89_RS04805	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ABB89_RS04825	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ABB89_RS04830	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
ABB89_RS04835	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABB89_RS04840	COG1555	photosystem II stabilization
ABB89_RS04840	COG1596	polysaccharide export
ABB89_RS04855	COG2951	lytic endotransglycosylase activity
ABB89_RS04860	COG0123	including yeast histone deacetylase and acetoin utilization protein
ABB89_RS04875	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS04880	COG0450	alkyl hydroperoxide reductase
ABB89_RS04895	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABB89_RS04900	COG4208	sulfate ABC transporter
ABB89_RS04905	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABB89_RS04935	COG0335	large ribosomal subunit rRNA binding
ABB89_RS04950	COG0667	Aldo Keto reductase
ABB89_RS04960	COG2814	Major facilitator Superfamily
ABB89_RS04965	COG3161	chorismate lyase activity
ABB89_RS04970	COG1187	pseudouridine synthase activity
ABB89_RS04980	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABB89_RS05000	COG1999	signal sequence binding
ABB89_RS05005	COG0339	signal peptide processing
ABB89_RS05010	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABB89_RS05015	COG4566	intracellular signal transduction
ABB89_RS05025	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ABB89_RS05030	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABB89_RS05035	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABB89_RS05040	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABB89_RS05050	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABB89_RS05055	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABB89_RS05060	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABB89_RS05065	COG0126	phosphoglycerate kinase activity
ABB89_RS05070	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABB89_RS05075	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABB89_RS05090	COG0625	glutathione transferase activity
ABB89_RS05125	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABB89_RS05135	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABB89_RS05145	COG0739	heme binding
ABB89_RS05155	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABB89_RS05190	COG0745	RESPONSE REGULATOR receiver
ABB89_RS05205	COG0840	transmembrane signaling receptor activity
ABB89_RS05215	COG2201	protein-glutamate methylesterase activity
ABB89_RS05220	COG0745	RESPONSE REGULATOR receiver
ABB89_RS05225	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
ABB89_RS05250	COG0667	Aldo Keto reductase
ABB89_RS05260	COG4535	Mg2 and Co2 transporter CorC
ABB89_RS05265	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ABB89_RS05270	COG1702	phosphate starvation-inducible protein PhoH
ABB89_RS05275	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABB89_RS05290	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABB89_RS05295	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABB89_RS05300	COG1862	Preprotein translocase
ABB89_RS05305	COG0343	queuine tRNA-ribosyltransferase activity
ABB89_RS05310	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABB89_RS05315	COG2027	D-alanyl-D-alanine carboxypeptidase
ABB89_RS05320	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABB89_RS05330	COG3468	outer membrane autotransporter barrel domain protein
ABB89_RS05345	COG3468	outer membrane autotransporter barrel domain protein
ABB89_RS05350	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABB89_RS05350	COG1648	precorrin-2 dehydrogenase activity
ABB89_RS05375	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ABB89_RS05380	COG0741	lytic transglycosylase activity
ABB89_RS05385	COG0436	Aminotransferase
ABB89_RS05395	COG0281	malic enzyme
ABB89_RS05395	COG0280	phosphate acetyltransferase
ABB89_RS05405	COG2732	(Barnase) inhibitor
ABB89_RS05420	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABB89_RS05445	COG0248	Ppx GppA phosphatase
ABB89_RS05455	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABB89_RS05465	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABB89_RS05470	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ABB89_RS05475	COG1534	Rna-binding protein
ABB89_RS05505	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABB89_RS05520	COG1295	ribonuclease BN
ABB89_RS05530	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABB89_RS05535	COG0745	RESPONSE REGULATOR receiver
ABB89_RS05540	COG2205	protein histidine kinase activity
ABB89_RS05575	COG1022	Amp-dependent synthetase and ligase
ABB89_RS05590	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ABB89_RS05595	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS05605	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABB89_RS05620	COG1136	(ABC) transporter
ABB89_RS05625	COG0084	hydrolase, TatD family'
ABB89_RS05655	COG0658	competence protein
ABB89_RS05655	COG2333	competence protein COMEC
ABB89_RS05665	COG0613	PHP domain protein
ABB89_RS05680	COG3539	Fimbrial protein
ABB89_RS05685	COG0281	malic enzyme
ABB89_RS05685	COG0280	phosphate acetyltransferase
ABB89_RS05695	COG1522	sequence-specific DNA binding
ABB89_RS05705	COG0567	Dehydrogenase, E1 component
ABB89_RS05710	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABB89_RS05715	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABB89_RS05720	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABB89_RS05725	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS05730	COG0583	DNA-binding transcription factor activity
ABB89_RS05740	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS05765	COG0180	Tryptophanyl-tRNA synthetase
ABB89_RS05770	COG2183	response to ionizing radiation
ABB89_RS05775	COG1199	ATP-dependent helicase activity
ABB89_RS05785	COG0564	pseudouridine synthase activity
ABB89_RS05795	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABB89_RS05800	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS05805	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
ABB89_RS05820	COG0672	)-iron permease
ABB89_RS05860	COG0583	DNA-binding transcription factor activity
ABB89_RS05870	COG2814	Major facilitator Superfamily
ABB89_RS05885	COG1619	proteins homologs of microcin C7 resistance protein MccF
ABB89_RS05900	COG2084	Dehydrogenase
ABB89_RS05905	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS05930	COG2988	succinylglutamate desuccinylase activity
ABB89_RS05955	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB89_RS05960	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABB89_RS05960	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB89_RS05965	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB89_RS05970	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABB89_RS05970	COG0047	phosphoribosylformylglycinamidine synthase activity
ABB89_RS05975	COG3210	domain, Protein
ABB89_RS05975	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
ABB89_RS05975	COG3064	Membrane
ABB89_RS06000	COG0235	Class ii aldolase
ABB89_RS06005	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB89_RS06010	COG0720	synthase
ABB89_RS06015	COG0602	queuosine metabolic process
ABB89_RS06040	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABB89_RS06075	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS06105	COG3842	ATPase activity
ABB89_RS06115	COG0395	ABC-type sugar transport system, permease component
ABB89_RS06145	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS06150	COG0420	3'-5' exonuclease activity
ABB89_RS06195	COG0519	Catalyzes the synthesis of GMP from XMP
ABB89_RS06195	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABB89_RS06210	COG3550	peptidyl-serine autophosphorylation
ABB89_RS06220	COG0477	Major facilitator Superfamily
ABB89_RS06235	COG1228	amidohydrolase
ABB89_RS06245	COG1116	anion transmembrane transporter activity
ABB89_RS06250	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS06290	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ABB89_RS06310	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ABB89_RS06340	COG2814	Major facilitator Superfamily
ABB89_RS06355	COG1280	lysine exporter protein (LysE YggA)
ABB89_RS06370	COG0747	negative chemotaxis
ABB89_RS06375	COG0601	transmembrane transport
ABB89_RS06380	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS06385	COG4172	Belongs to the ABC transporter superfamily
ABB89_RS06390	COG1609	Transcriptional regulator
ABB89_RS06420	COG0586	Pfam SNARE associated Golgi protein
ABB89_RS06435	COG0500	methyltransferase
ABB89_RS06450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB89_RS06460	COG0756	dUTP diphosphatase activity
ABB89_RS06475	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABB89_RS06480	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABB89_RS06485	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABB89_RS06490	COG0072	phenylalanine-tRNA ligase activity
ABB89_RS06490	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABB89_RS06495	COG0776	regulation of translation
ABB89_RS06565	COG0540	Belongs to the ATCase OTCase family
ABB89_RS06570	COG2974	May be involved in recombination
ABB89_RS06580	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS06585	COG0583	DNA-binding transcription factor activity
ABB89_RS06605	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS06620	COG3842	ATPase activity
ABB89_RS06625	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB89_RS06625	COG1024	Enoyl-CoA hydratase
ABB89_RS06645	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABB89_RS06650	COG2137	regulation of response to DNA damage stimulus
ABB89_RS06660	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ABB89_RS06670	COG0045	succinate-CoA ligase (ADP-forming) activity
ABB89_RS06675	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ABB89_RS06680	COG0861	Integral membrane protein TerC family
ABB89_RS06685	COG0861	Integral membrane protein TerC family
ABB89_RS06690	COG0181	hydroxymethylbilane synthase activity
ABB89_RS06750	COG4964	Belongs to the GSP D family
ABB89_RS06780	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABB89_RS06790	COG0583	DNA-binding transcription factor activity
ABB89_RS06800	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS06805	COG4311	Sarcosine oxidase, delta subunit
ABB89_RS06810	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABB89_RS06810	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ABB89_RS06845	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ABB89_RS06850	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ABB89_RS06855	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABB89_RS06860	COG0735	belongs to the Fur family
ABB89_RS06865	COG0497	DNA recombination
ABB89_RS06870	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABB89_RS06875	COG1420	regulation of RNA biosynthetic process
ABB89_RS06880	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ABB89_RS06890	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABB89_RS06900	COG0443	Heat shock 70 kDa protein
ABB89_RS06910	COG0612	Peptidase, M16
ABB89_RS06930	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABB89_RS06975	COG0745	RESPONSE REGULATOR receiver
ABB89_RS06980	COG2205	protein histidine kinase activity
ABB89_RS06985	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
ABB89_RS06990	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABB89_RS06995	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABB89_RS07010	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABB89_RS07030	COG1193	negative regulation of DNA recombination
ABB89_RS07035	COG0492	ferredoxin-NADP+ reductase activity
ABB89_RS07040	COG1674	ftsk spoiiie
ABB89_RS07045	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABB89_RS07050	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABB89_RS07055	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABB89_RS07080	COG3706	GGDEF domain
ABB89_RS07100	COG2814	Major facilitator Superfamily
ABB89_RS07130	COG3486	L-lysine 6-monooxygenase (NADPH) activity
ABB89_RS07145	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS07155	COG3022	response to hydroperoxide
ABB89_RS07165	COG1289	transmembrane transporter activity
ABB89_RS07185	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABB89_RS07195	COG2197	response regulator
ABB89_RS07200	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABB89_RS07205	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ABB89_RS07210	COG0189	ligase activity
ABB89_RS07220	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABB89_RS07225	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABB89_RS07235	COG1764	response to oxidative stress
ABB89_RS07240	COG2423	ornithine cyclodeaminase activity
ABB89_RS07250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS07255	COG0765	amino acid transport
ABB89_RS07260	COG0765	amino acid transport
ABB89_RS07265	COG1126	abc transporter atp-binding protein
ABB89_RS07320	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ABB89_RS07330	COG2944	sequence-specific DNA binding
ABB89_RS07340	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ABB89_RS07345	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ABB89_RS07350	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABB89_RS07355	COG0009	L-threonylcarbamoyladenylate synthase
ABB89_RS07360	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS07365	COG1414	Transcriptional regulator
ABB89_RS07380	COG0765	amino acid transport
ABB89_RS07385	COG1126	abc transporter atp-binding protein
ABB89_RS07390	COG0028	Belongs to the TPP enzyme family
ABB89_RS07405	COG0028	Belongs to the TPP enzyme family
ABB89_RS07410	COG0583	DNA-binding transcription factor activity
ABB89_RS07415	COG4974	Belongs to the 'phage' integrase family
ABB89_RS07420	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABB89_RS07425	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
ABB89_RS07440	COG1686	Belongs to the peptidase S11 family
ABB89_RS07450	COG2814	Major facilitator Superfamily
ABB89_RS07460	COG1074	ATP-dependent DNA helicase activity
ABB89_RS07475	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABB89_RS07480	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ABB89_RS07485	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABB89_RS07510	COG2321	neutral zinc metallopeptidase
ABB89_RS07515	COG0009	L-threonylcarbamoyladenylate synthase
ABB89_RS07560	COG3360	Dodecin
ABB89_RS07565	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABB89_RS07570	COG2850	peptidyl-arginine hydroxylation
ABB89_RS07575	COG3539	Fimbrial protein
ABB89_RS07580	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
ABB89_RS07585	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABB89_RS07605	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS07610	COG0765	amino acid transport
ABB89_RS07615	COG1126	abc transporter atp-binding protein
ABB89_RS07620	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABB89_RS07625	COG1758	RNA polymerase activity
ABB89_RS07630	COG0194	GDP metabolic process
ABB89_RS07635	COG3258	Cytochrome c
ABB89_RS07640	COG2863	cytochrome
ABB89_RS07645	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS07650	COG0791	NLP P60 protein
ABB89_RS07655	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABB89_RS07675	COG1561	YicC-like family, N-terminal region
ABB89_RS07680	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ABB89_RS07695	COG0840	transmembrane signaling receptor activity
ABB89_RS07700	COG2200	EAL domain
ABB89_RS07700	COG2199	diguanylate cyclase activity
ABB89_RS07705	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABB89_RS07715	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABB89_RS07720	COG0174	glutamine synthetase
ABB89_RS07730	COG2204	response regulator
ABB89_RS07735	COG0583	DNA-binding transcription factor activity
ABB89_RS07740	COG1741	Belongs to the pirin family
ABB89_RS07745	COG1741	Belongs to the pirin family
ABB89_RS07755	COG3842	ATPase activity
ABB89_RS07760	COG1178	ABC-type Fe3 transport system permease component
ABB89_RS07765	COG1840	ABC-type Fe3 transport system, periplasmic component
ABB89_RS07775	COG0583	DNA-binding transcription factor activity
ABB89_RS07785	COG0656	L-ascorbic acid biosynthetic process
ABB89_RS07800	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABB89_RS07805	COG0583	DNA-binding transcription factor activity
ABB89_RS07820	COG0783	Belongs to the Dps family
ABB89_RS07840	COG0463	Glycosyl transferase, family 2
ABB89_RS07860	COG0438	transferase activity, transferring glycosyl groups
ABB89_RS07875	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABB89_RS07900	COG0300	oxidoreductase activity
ABB89_RS07945	COG0861	Integral membrane protein TerC family
ABB89_RS07950	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS07970	COG0714	Associated with various cellular activities
ABB89_RS08005	COG3119	arylsulfatase activity
ABB89_RS08030	COG2197	response regulator
ABB89_RS08040	COG2944	sequence-specific DNA binding
ABB89_RS08045	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
ABB89_RS08050	COG0625	glutathione transferase activity
ABB89_RS08080	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABB89_RS08085	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS08130	COG0431	NADPH-dependent FMN reductase
ABB89_RS08160	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS08165	COG0583	DNA-binding transcription factor activity
ABB89_RS08180	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS08185	COG2111	Na H antiporter
ABB89_RS08185	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABB89_RS08190	COG1006	Multisubunit Na H antiporter MnhC subunit
ABB89_RS08195	COG0651	ATP synthesis coupled electron transport
ABB89_RS08200	COG1863	multisubunit Na H antiporter MnhE subunit
ABB89_RS08205	COG2212	antiporter activity
ABB89_RS08230	COG0590	tRNA wobble adenosine to inosine editing
ABB89_RS08235	COG1619	proteins homologs of microcin C7 resistance protein MccF
ABB89_RS08240	COG1024	Enoyl-CoA hydratase
ABB89_RS08255	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB89_RS08260	COG0488	(ABC) transporter
ABB89_RS08295	COG1017	nitric oxide dioxygenase activity
ABB89_RS08295	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABB89_RS08300	COG1959	2 iron, 2 sulfur cluster binding
ABB89_RS08305	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS08325	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABB89_RS08330	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABB89_RS08335	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABB89_RS08340	COG0084	hydrolase, TatD family'
ABB89_RS08355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS08365	COG1126	abc transporter atp-binding protein
ABB89_RS08370	COG0010	Belongs to the arginase family
ABB89_RS08375	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABB89_RS08380	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS08390	COG0028	Belongs to the TPP enzyme family
ABB89_RS08400	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB89_RS08400	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABB89_RS08410	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB89_RS08425	COG3189	MarR family transcriptional regulator
ABB89_RS08430	COG2010	Cytochrome c
ABB89_RS08455	COG4336	lyase activity
ABB89_RS08465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS08465	COG2205	protein histidine kinase activity
ABB89_RS08470	COG2197	response regulator
ABB89_RS08475	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
ABB89_RS08475	COG3210	domain, Protein
ABB89_RS08475	COG3064	Membrane
ABB89_RS08485	COG3121	Chaperone
ABB89_RS08490	COG3188	usher protein
ABB89_RS08495	COG3539	Fimbrial protein
ABB89_RS08500	COG2831	hemolysin activation secretion protein
ABB89_RS08515	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB89_RS08540	COG0583	DNA-binding transcription factor activity
ABB89_RS08565	COG0668	transmembrane transport
ABB89_RS08585	COG0483	inositol monophosphate 1-phosphatase activity
ABB89_RS08590	COG1253	flavin adenine dinucleotide binding
ABB89_RS08595	COG1968	undecaprenyl-diphosphatase activity
ABB89_RS08600	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABB89_RS08615	COG0215	cysteine-tRNA ligase activity
ABB89_RS08625	COG0825	malonyl-CoA metabolic process
ABB89_RS08635	COG0037	tRNA processing
ABB89_RS08640	COG0527	aspartate kinase activity
ABB89_RS08665	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB89_RS08670	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB89_RS08670	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABB89_RS08685	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABB89_RS08690	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
ABB89_RS08695	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS08705	COG0583	DNA-binding transcription factor activity
ABB89_RS08735	COG3842	ATPase activity
ABB89_RS08745	COG1902	pentaerythritol trinitrate reductase activity
ABB89_RS08745	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABB89_RS08750	COG1414	Transcriptional regulator
ABB89_RS08755	COG1832	CoA-binding protein
ABB89_RS08765	COG0251	oxidation-reduction process
ABB89_RS08790	COG1902	pentaerythritol trinitrate reductase activity
ABB89_RS08800	COG1215	transferase activity, transferring glycosyl groups
ABB89_RS08805	COG1649	PFAM Uncharacterised BCR, COG1649
ABB89_RS08805	COG0726	polysaccharide deacetylase
ABB89_RS08825	COG1846	Transcriptional regulator
ABB89_RS08840	COG3468	outer membrane autotransporter barrel domain protein
ABB89_RS08845	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABB89_RS08855	COG0556	nucleotide-excision repair
ABB89_RS08860	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABB89_RS08870	COG1104	cysteine desulfurase activity
ABB89_RS08875	COG0822	iron-sulfur transferase activity
ABB89_RS08880	COG0316	Belongs to the HesB IscA family
ABB89_RS08885	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ABB89_RS08890	COG0443	Heat shock 70 kDa protein
ABB89_RS08895	COG0633	Ferredoxin
ABB89_RS08915	COG1024	Enoyl-CoA hydratase
ABB89_RS08930	COG3395	kinase activity
ABB89_RS08935	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABB89_RS08950	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ABB89_RS08960	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS08985	COG0747	negative chemotaxis
ABB89_RS08990	COG0601	transmembrane transport
ABB89_RS08995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS09000	COG4172	Belongs to the ABC transporter superfamily
ABB89_RS09005	COG0154	amidase activity
ABB89_RS09050	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABB89_RS09055	COG0425	Belongs to the sulfur carrier protein TusA family
ABB89_RS09065	COG0228	four-way junction DNA binding
ABB89_RS09070	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABB89_RS09075	COG0336	Belongs to the RNA methyltransferase TrmD family
ABB89_RS09080	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABB89_RS09100	COG0642	Histidine kinase
ABB89_RS09115	COG0525	valine-tRNA ligase activity
ABB89_RS09120	COG0105	UTP biosynthetic process
ABB89_RS09125	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABB89_RS09135	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ABB89_RS09140	COG0124	histidyl-tRNA synthetase
ABB89_RS09145	COG2976	Protein conserved in bacteria
ABB89_RS09150	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABB89_RS09155	COG1160	GTP binding
ABB89_RS09160	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABB89_RS09165	COG1923	regulation of RNA biosynthetic process
ABB89_RS09170	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABB89_RS09175	COG0330	HflC and HflK could
ABB89_RS09180	COG0330	HflC and HflK could
ABB89_RS09185	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ABB89_RS09190	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABB89_RS09195	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ABB89_RS09200	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABB89_RS09210	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABB89_RS09245	COG0628	permease
ABB89_RS09250	COG0842	Transport permease protein
ABB89_RS09255	COG1131	(ABC) transporter
ABB89_RS09325	COG0156	8-amino-7-oxononanoate synthase activity
ABB89_RS09335	COG4106	trans-aconitate 2-methyltransferase activity
ABB89_RS09335	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ABB89_RS09340	COG1380	Effector of murein hydrolase LrgA
ABB89_RS09355	COG3284	Transcriptional regulator
ABB89_RS09360	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS09375	COG2733	membrane
ABB89_RS09380	COG0583	DNA-binding transcription factor activity
ABB89_RS09385	COG0384	phenazine biosynthesis protein PhzF
ABB89_RS09390	COG5507	3-demethylubiquinone-9 3-methyltransferase
ABB89_RS09395	COG2169	Transcriptional regulator
ABB89_RS09425	COG0659	secondary active sulfate transmembrane transporter activity
ABB89_RS09450	COG1132	(ABC) transporter
ABB89_RS09495	COG2207	Transcriptional regulator
ABB89_RS09630	COG2346	COG2346, Truncated hemoglobins
ABB89_RS09675	COG0183	Belongs to the thiolase family
ABB89_RS09690	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS09695	COG0633	Ferredoxin
ABB89_RS09705	COG1024	Enoyl-CoA hydratase
ABB89_RS09715	COG4638	Rieske (2fe-2S)
ABB89_RS09725	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABB89_RS09745	COG2224	Isocitrate lyase
ABB89_RS09750	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABB89_RS09750	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABB89_RS09765	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABB89_RS09770	COG0322	excinuclease ABC activity
ABB89_RS09775	COG1472	Belongs to the glycosyl hydrolase 3 family
ABB89_RS09780	COG0736	holo-[acyl-carrier-protein] synthase activity
ABB89_RS09785	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABB89_RS09795	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABB89_RS09800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABB89_RS09825	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ABB89_RS09840	COG2032	superoxide dismutase activity
ABB89_RS09855	COG1024	Enoyl-CoA hydratase
ABB89_RS09865	COG1802	Transcriptional regulator
ABB89_RS09875	COG0183	Belongs to the thiolase family
ABB89_RS09880	COG1942	4-Oxalocrotonate Tautomerase
ABB89_RS09890	COG4176	ABC-type proline glycine betaine transport system permease component
ABB89_RS09905	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABB89_RS09910	COG2814	Major facilitator Superfamily
ABB89_RS09915	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABB89_RS09920	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABB89_RS09950	COG2814	Major facilitator Superfamily
ABB89_RS09955	COG0495	leucyl-tRNA aminoacylation
ABB89_RS09970	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ABB89_RS09980	COG0154	amidase activity
ABB89_RS09985	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB89_RS10040	COG0427	acetyl-CoA hydrolase
ABB89_RS10045	COG0583	DNA-binding transcription factor activity
ABB89_RS10065	COG0730	response to heat
ABB89_RS10070	COG0697	spore germination
ABB89_RS10105	COG2885	chlorophyll binding
ABB89_RS10130	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABB89_RS10135	COG3384	dioxygenase
ABB89_RS10150	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABB89_RS10155	COG3474	cytochrome
ABB89_RS10165	COG1595	DNA-templated transcription, initiation
ABB89_RS10180	COG2204	response regulator
ABB89_RS10220	COG4964	Belongs to the GSP D family
ABB89_RS10270	COG1846	Transcriptional regulator
ABB89_RS10275	COG4172	Belongs to the ABC transporter superfamily
ABB89_RS10280	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS10285	COG0601	transmembrane transport
ABB89_RS10290	COG0747	negative chemotaxis
ABB89_RS10300	COG0598	Magnesium transport protein CorA
ABB89_RS10305	COG0210	DNA helicase
ABB89_RS10320	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABB89_RS10325	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS10330	COG0483	inositol monophosphate 1-phosphatase activity
ABB89_RS10335	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABB89_RS10345	COG1045	serine acetyltransferase
ABB89_RS10350	COG0166	Belongs to the GPI family
ABB89_RS10365	COG2197	response regulator
ABB89_RS10385	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABB89_RS10400	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS10405	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS10410	COG0183	Belongs to the thiolase family
ABB89_RS10420	COG1024	Enoyl-CoA hydratase
ABB89_RS10435	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS10440	COG0583	DNA-binding transcription factor activity
ABB89_RS10445	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABB89_RS10450	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABB89_RS10455	COG0740	serine-type endopeptidase activity
ABB89_RS10460	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABB89_RS10480	COG1278	Cold shock
ABB89_RS10515	COG2171	N-acyltransferase activity
ABB89_RS10520	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABB89_RS10525	COG2890	protein-(glutamine-N5) methyltransferase activity
ABB89_RS10530	COG0488	(ABC) transporter
ABB89_RS10535	COG4771	TonB-dependent receptor
ABB89_RS10540	COG0210	DNA helicase
ABB89_RS10560	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABB89_RS10565	COG0196	riboflavin kinase activity
ABB89_RS10570	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABB89_RS10575	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ABB89_RS10580	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABB89_RS10590	COG1522	sequence-specific DNA binding
ABB89_RS10610	COG2951	lytic endotransglycosylase activity
ABB89_RS10615	COG2833	Protein of unknown function (DUF455)
ABB89_RS10635	COG0189	ligase activity
ABB89_RS10635	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABB89_RS10640	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABB89_RS10640	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABB89_RS10645	COG3237	CsbD-like
ABB89_RS10655	COG2823	Periplasmic or secreted lipoprotein
ABB89_RS10665	COG4181	ATPase activity
ABB89_RS10675	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABB89_RS10680	COG0584	glycerophosphoryl diester phosphodiesterase
ABB89_RS10685	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABB89_RS10695	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABB89_RS10695	COG0678	peroxiredoxin activity
ABB89_RS10705	COG0789	Transcriptional regulator
ABB89_RS10710	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABB89_RS10740	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABB89_RS10745	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ABB89_RS10755	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ABB89_RS10760	COG2252	PERMEase
ABB89_RS10770	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABB89_RS10805	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABB89_RS10810	COG2358	TRAP transporter, solute receptor (TAXI family
ABB89_RS10840	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB89_RS10845	COG1366	Belongs to the anti-sigma-factor antagonist family
ABB89_RS10850	COG2172	sigma factor antagonist activity
ABB89_RS10855	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABB89_RS10865	COG2208	phosphoserine phosphatase activity
ABB89_RS10865	COG2770	Histidine kinase
ABB89_RS10890	COG1595	DNA-templated transcription, initiation
ABB89_RS10905	COG4792	protein secretion
ABB89_RS10910	COG4791	protein targeting
ABB89_RS10915	COG4794	Type iii secretion
ABB89_RS10920	COG4790	Type iii secretion
ABB89_RS10955	COG4669	(LipO)protein
ABB89_RS11020	COG4789	Type iii secretion
ABB89_RS11050	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABB89_RS11055	COG0840	transmembrane signaling receptor activity
ABB89_RS11060	COG2233	PERMEase
ABB89_RS11080	COG0492	ferredoxin-NADP+ reductase activity
ABB89_RS11085	COG1840	ABC-type Fe3 transport system, periplasmic component
ABB89_RS11090	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABB89_RS11095	COG1178	ABC-type Fe3 transport system permease component
ABB89_RS11100	COG3842	ATPase activity
ABB89_RS11105	COG0583	DNA-binding transcription factor activity
ABB89_RS11125	COG0501	Belongs to the peptidase M48B family
ABB89_RS11135	COG0697	spore germination
ABB89_RS11145	COG1846	Transcriptional regulator
ABB89_RS11155	COG1566	PFAM secretion protein HlyD family protein
ABB89_RS11160	COG2814	Major facilitator Superfamily
ABB89_RS11165	COG0473	3-isopropylmalate dehydrogenase activity
ABB89_RS11175	COG0747	negative chemotaxis
ABB89_RS11185	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS11200	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABB89_RS11225	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS11235	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABB89_RS11240	COG1115	amino acid carrier protein
ABB89_RS11245	COG0433	COG0433 Predicted ATPase
ABB89_RS11250	COG0217	transcriptional regulatory protein
ABB89_RS11255	COG0151	Belongs to the GarS family
ABB89_RS11260	COG0408	coproporphyrinogen oxidase activity
ABB89_RS11265	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ABB89_RS11270	COG0799	negative regulation of ribosome biogenesis
ABB89_RS11275	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ABB89_RS11280	COG0424	maF-like protein
ABB89_RS11285	COG3468	outer membrane autotransporter barrel domain protein
ABB89_RS11325	COG1530	ribonuclease E activity
ABB89_RS11330	COG0077	Prephenate dehydratase
ABB89_RS11345	COG1132	(ABC) transporter
ABB89_RS11350	COG0859	PFAM glycosyl transferase family 9
ABB89_RS11375	COG2194	sulfuric ester hydrolase activity
ABB89_RS11380	COG0438	transferase activity, transferring glycosyl groups
ABB89_RS11385	COG0463	Glycosyl transferase, family 2
ABB89_RS11390	COG0726	polysaccharide deacetylase
ABB89_RS11395	COG0438	transferase activity, transferring glycosyl groups
ABB89_RS11410	COG1643	Atp-dependent helicase
ABB89_RS11415	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ABB89_RS11415	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABB89_RS11420	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
ABB89_RS11430	COG0704	Plays a role in the regulation of phosphate uptake
ABB89_RS11435	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ABB89_RS11440	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS11465	COG1177	transmembrane transport
ABB89_RS11470	COG1176	ABC-type spermidine putrescine transport system, permease component I
ABB89_RS11475	COG3842	ATPase activity
ABB89_RS11480	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ABB89_RS11495	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABB89_RS11500	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB89_RS11510	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB89_RS11510	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABB89_RS11530	COG0372	Belongs to the citrate synthase family
ABB89_RS11535	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABB89_RS11540	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABB89_RS11545	COG1053	succinate dehydrogenase
ABB89_RS11550	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABB89_RS11555	COG2009	succinate dehydrogenase
ABB89_RS11560	COG2188	Transcriptional regulator
ABB89_RS11565	COG0039	L-malate dehydrogenase activity
ABB89_RS11595	COG1981	membrane
ABB89_RS11620	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB89_RS11630	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABB89_RS11660	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABB89_RS11665	COG0148	phosphopyruvate hydratase activity
ABB89_RS11675	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ABB89_RS11680	COG0504	CTP synthase activity
ABB89_RS11705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS11715	COG0747	negative chemotaxis
ABB89_RS11720	COG4172	Belongs to the ABC transporter superfamily
ABB89_RS11725	COG1446	asparaginase
ABB89_RS11755	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABB89_RS11770	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
ABB89_RS11775	COG0697	spore germination
ABB89_RS11780	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB89_RS11790	COG3193	protein, possibly involved in utilization of glycolate and propanediol
ABB89_RS11795	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB89_RS11800	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB89_RS11805	COG0791	NLP P60 protein
ABB89_RS11820	COG0583	DNA-binding transcription factor activity
ABB89_RS11835	COG0583	DNA-binding transcription factor activity
ABB89_RS11845	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ABB89_RS11860	COG0670	Belongs to the BI1 family
ABB89_RS11865	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS11875	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABB89_RS11885	COG1381	Involved in DNA repair and RecF pathway recombination
ABB89_RS11890	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABB89_RS11895	COG0571	ribonuclease III activity
ABB89_RS11900	COG0681	Belongs to the peptidase S26 family
ABB89_RS11905	COG0481	GTPase activity
ABB89_RS11910	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABB89_RS11935	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABB89_RS11940	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABB89_RS11955	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABB89_RS11960	COG0416	fatty acid biosynthetic process
ABB89_RS11965	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ABB89_RS11970	COG1399	metal-binding, possibly nucleic acid-binding protein
ABB89_RS11975	COG0424	maF-like protein
ABB89_RS11985	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABB89_RS11990	COG1289	transmembrane transporter activity
ABB89_RS12000	COG3022	response to hydroperoxide
ABB89_RS12015	COG0135	phosphoribosylanthranilate isomerase activity
ABB89_RS12030	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB89_RS12035	COG0101	tRNA pseudouridine synthase activity
ABB89_RS12045	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ABB89_RS12050	COG0473	3-isopropylmalate dehydrogenase activity
ABB89_RS12055	COG0066	3-isopropylmalate dehydratase activity
ABB89_RS12060	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABB89_RS12070	COG1122	ATPase activity
ABB89_RS12100	COG0437	4 iron, 4 sulfur cluster binding
ABB89_RS12105	COG3383	formate dehydrogenase (NAD+) activity
ABB89_RS12105	COG0243	molybdopterin cofactor binding
ABB89_RS12135	COG0489	protein tyrosine kinase activity
ABB89_RS12140	COG0746	molybdenum cofactor guanylyltransferase activity
ABB89_RS12145	COG0303	'Molybdopterin
ABB89_RS12150	COG1763	Mo-molybdopterin cofactor biosynthetic process
ABB89_RS12160	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ABB89_RS12165	COG5001	Diguanylate cyclase
ABB89_RS12185	COG3842	ATPase activity
ABB89_RS12195	COG0406	alpha-ribazole phosphatase activity
ABB89_RS12205	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ABB89_RS12210	COG0505	Belongs to the CarA family
ABB89_RS12215	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABB89_RS12245	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ABB89_RS12250	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS12260	COG2867	negative regulation of translational initiation
ABB89_RS12270	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABB89_RS12275	COG3706	GGDEF domain
ABB89_RS12280	COG0330	HflC and HflK could
ABB89_RS12295	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABB89_RS12295	COG0519	Catalyzes the synthesis of GMP from XMP
ABB89_RS12305	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
ABB89_RS12310	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABB89_RS12315	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABB89_RS12320	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABB89_RS12330	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABB89_RS12335	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABB89_RS12340	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
ABB89_RS12345	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABB89_RS12350	COG0750	zinc metalloprotease
ABB89_RS12355	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABB89_RS12365	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABB89_RS12370	COG0233	cytoplasmic translational termination
ABB89_RS12375	COG0528	UMP kinase activity
ABB89_RS12380	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABB89_RS12385	COG0052	Belongs to the universal ribosomal protein uS2 family
ABB89_RS12390	COG0024	Methionine aminopeptidase
ABB89_RS12395	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
ABB89_RS12425	COG0285	dihydrofolate synthase activity
ABB89_RS12460	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABB89_RS12470	COG1677	Flagellar hook-basal body complex protein FliE
ABB89_RS12480	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABB89_RS12490	COG1157	protein secretion by the type III secretion system
ABB89_RS12515	COG1580	Controls the rotational direction of flagella during chemotaxis
ABB89_RS12535	COG1338	Plays a role in the flagellum-specific transport system
ABB89_RS12555	COG0840	transmembrane signaling receptor activity
ABB89_RS12560	COG0840	transmembrane signaling receptor activity
ABB89_RS12565	COG0840	transmembrane signaling receptor activity
ABB89_RS12575	COG1256	bacterial-type flagellum assembly
ABB89_RS12585	COG1706	bacterial-type flagellum-dependent cell motility
ABB89_RS12590	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
ABB89_RS12605	COG1749	Flagellar hook protein flgE
ABB89_RS12615	COG1558	bacterial-type flagellum-dependent cell motility
ABB89_RS12620	COG1815	bacterial-type flagellum-dependent cell motility
ABB89_RS12660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS12665	COG0765	amino acid transport
ABB89_RS12670	COG1126	abc transporter atp-binding protein
ABB89_RS12685	COG4948	Mandelate Racemase Muconate Lactonizing
ABB89_RS12690	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS12700	COG0066	3-isopropylmalate dehydratase activity
ABB89_RS12715	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS12725	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS12735	COG1802	Transcriptional regulator
ABB89_RS12750	COG0583	DNA-binding transcription factor activity
ABB89_RS12770	COG1695	Transcriptional regulator
ABB89_RS12780	COG3568	Endonuclease Exonuclease Phosphatase
ABB89_RS12785	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB89_RS12800	COG0392	lysyltransferase activity
ABB89_RS12840	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ABB89_RS12850	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ABB89_RS12870	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ABB89_RS12900	COG0667	Aldo Keto reductase
ABB89_RS12915	COG2259	Doxx family
ABB89_RS12950	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS12970	COG0386	Belongs to the glutathione peroxidase family
ABB89_RS12975	COG0625	glutathione transferase activity
ABB89_RS13000	COG0688	phosphatidylethanolamine metabolic process
ABB89_RS13010	COG1464	Belongs to the NlpA lipoprotein family
ABB89_RS13025	COG2363	Small membrane protein
ABB89_RS13050	COG3842	ATPase activity
ABB89_RS13055	COG0395	ABC-type sugar transport system, permease component
ABB89_RS13060	COG1175	transmembrane transport
ABB89_RS13065	COG1653	transport
ABB89_RS13075	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ABB89_RS13090	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABB89_RS13110	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABB89_RS13125	COG0697	spore germination
ABB89_RS13140	COG2311	Membrane
ABB89_RS13165	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ABB89_RS13175	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABB89_RS13180	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABB89_RS13185	COG1760	l-serine dehydratase
ABB89_RS13190	COG1283	sodium-dependent phosphate transmembrane transporter activity
ABB89_RS13195	COG0412	Dienelactone hydrolase
ABB89_RS13210	COG1611	Belongs to the LOG family
ABB89_RS13230	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABB89_RS13235	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABB89_RS13240	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABB89_RS13245	COG0195	Participates in both transcription termination and antitermination
ABB89_RS13245	COG2251	uridine kinase activity
ABB89_RS13250	COG0779	Required for maturation of 30S ribosomal subunits
ABB89_RS13255	COG1187	pseudouridine synthase activity
ABB89_RS13260	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABB89_RS13270	COG0583	DNA-binding transcription factor activity
ABB89_RS13280	COG0523	cobalamin synthesis protein
ABB89_RS13300	COG0625	glutathione transferase activity
ABB89_RS13305	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABB89_RS13310	COG1047	Peptidyl-prolyl cis-trans
ABB89_RS13315	COG2003	Belongs to the UPF0758 family
ABB89_RS13320	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
ABB89_RS13325	COG3483	tryptophan 2,3-dioxygenase activity
ABB89_RS13330	COG0254	rRNA binding
ABB89_RS13340	COG0534	Mate efflux family protein
ABB89_RS13360	COG2304	oxidoreductase activity
ABB89_RS13380	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS13385	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABB89_RS13390	COG1562	ergosterol biosynthetic process
ABB89_RS13395	COG1562	ergosterol biosynthetic process
ABB89_RS13400	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
ABB89_RS13400	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
ABB89_RS13405	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABB89_RS13415	COG0842	Transport permease protein
ABB89_RS13420	COG1131	(ABC) transporter
ABB89_RS13440	COG1477	protein flavinylation
ABB89_RS13455	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
ABB89_RS13470	COG5564	TIM-barrel signal transduction protein
ABB89_RS13475	COG5441	Belongs to the UPF0261 family
ABB89_RS13485	COG3468	outer membrane autotransporter barrel domain protein
ABB89_RS13490	COG3468	outer membrane autotransporter barrel domain protein
ABB89_RS13505	COG0542	response to heat
ABB89_RS13510	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABB89_RS13525	COG0494	nUDIX hydrolase
ABB89_RS13530	COG3530	Putative quorum-sensing-regulated virulence factor
ABB89_RS13540	COG1595	DNA-templated transcription, initiation
ABB89_RS13545	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABB89_RS13580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS13585	COG0765	amino acid transport
ABB89_RS13590	COG0765	amino acid transport
ABB89_RS13615	COG3539	Fimbrial protein
ABB89_RS13625	COG2050	protein possibly involved in aromatic compounds catabolism
ABB89_RS13630	COG1024	Enoyl-CoA hydratase
ABB89_RS13635	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS13645	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABB89_RS13650	COG2151	metal-sulfur cluster biosynthetic enzyme
ABB89_RS13655	COG3396	Phenylacetate-CoA oxygenase
ABB89_RS13660	COG3460	Phenylacetate-CoA oxygenase
ABB89_RS13665	COG3396	Phenylacetate-CoA oxygenase
ABB89_RS13670	COG3327	negative regulation of DNA-templated transcription, initiation
ABB89_RS13680	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABB89_RS13685	COG0501	Belongs to the peptidase M48B family
ABB89_RS13690	COG1162	GTPase activity
ABB89_RS13695	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS13700	COG0601	transmembrane transport
ABB89_RS13705	COG0747	negative chemotaxis
ABB89_RS13750	COG0668	transmembrane transport
ABB89_RS13755	COG0165	Argininosuccinate lyase
ABB89_RS13775	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABB89_RS13780	COG0303	'Molybdopterin
ABB89_RS13785	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABB89_RS13800	COG0315	cyclic pyranopterin monophosphate synthase activity
ABB89_RS13810	COG0412	Dienelactone hydrolase
ABB89_RS13820	COG0678	peroxiredoxin activity
ABB89_RS13830	COG0697	spore germination
ABB89_RS13835	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ABB89_RS13860	COG0789	Transcriptional regulator
ABB89_RS13880	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS13890	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABB89_RS13895	COG1845	cytochrome c oxidase, subunit III
ABB89_RS13900	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABB89_RS13910	COG0477	Major facilitator Superfamily
ABB89_RS13940	COG3468	outer membrane autotransporter barrel domain protein
ABB89_RS13950	COG1309	transcriptional regulator
ABB89_RS13955	COG2271	Major facilitator Superfamily
ABB89_RS13990	COG0506	proline dehydrogenase activity
ABB89_RS13990	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABB89_RS13990	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABB89_RS14000	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABB89_RS14000	COG3008	intermembrane lipid transfer
ABB89_RS14005	COG2995	paraquat-inducible protein a
ABB89_RS14010	COG0542	response to heat
ABB89_RS14015	COG4953	penicillin-binding protein 1C
ABB89_RS14025	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABB89_RS14030	COG1278	Cold shock
ABB89_RS14040	COG0183	Belongs to the thiolase family
ABB89_RS14045	COG0038	chloride channel
ABB89_RS14050	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABB89_RS14055	COG1570	exodeoxyribonuclease VII activity
ABB89_RS14065	COG0811	peptide transport
ABB89_RS14070	COG0848	biopolymer transport protein
ABB89_RS14075	COG1663	tetraacyldisaccharide 4'-kinase activity
ABB89_RS14080	COG2835	tetraacyldisaccharide 4'-kinase activity
ABB89_RS14085	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ABB89_RS14090	COG0563	adenylate kinase activity
ABB89_RS14100	COG0728	peptidoglycan biosynthetic process
ABB89_RS14110	COG0268	Binds directly to 16S ribosomal RNA
ABB89_RS14140	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ABB89_RS14165	COG0436	Aminotransferase
ABB89_RS14170	COG3737	Protein of unknown function (DUF498/DUF598)
ABB89_RS14175	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABB89_RS14180	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ABB89_RS14185	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABB89_RS14195	COG0305	Participates in initiation and elongation during chromosome replication
ABB89_RS14205	COG0359	binds to the 23S rRNA
ABB89_RS14210	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABB89_RS14215	COG2965	DNA replication, synthesis of RNA primer
ABB89_RS14220	COG0360	Binds together with S18 to 16S ribosomal RNA
ABB89_RS14225	COG1469	GTP cyclohydrolase I activity
ABB89_RS14230	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABB89_RS14235	COG0142	geranyltranstransferase activity
ABB89_RS14240	COG1722	exodeoxyribonuclease VII activity
ABB89_RS14250	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS14270	COG2239	Acts as a magnesium transporter
ABB89_RS14280	COG2855	membrane
ABB89_RS14290	COG1473	amidohydrolase
ABB89_RS14295	COG0318	PFAM AMP-dependent synthetase and ligase
ABB89_RS14320	COG1501	Belongs to the glycosyl hydrolase 31 family
ABB89_RS14325	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABB89_RS14330	COG2011	ABC-type metal ion transport system permease component
ABB89_RS14350	COG1454	alcohol dehydrogenase
ABB89_RS14380	COG2186	Transcriptional regulator
ABB89_RS14385	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS14405	COG1175	transmembrane transport
ABB89_RS14410	COG0395	ABC-type sugar transport system, permease component
ABB89_RS14415	COG3842	ATPase activity
ABB89_RS14420	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABB89_RS14430	COG1653	transport
ABB89_RS14450	COG2818	Glycosylase
ABB89_RS14455	COG2982	Protein involved in outer membrane biogenesis
ABB89_RS14465	COG1309	transcriptional regulator
ABB89_RS14470	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS14530	COG0583	DNA-binding transcription factor activity
ABB89_RS14535	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ABB89_RS14540	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB89_RS14555	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS14560	COG0477	Major facilitator Superfamily
ABB89_RS14570	COG0583	DNA-binding transcription factor activity
ABB89_RS14575	COG1448	Aminotransferase
ABB89_RS14580	COG1418	mRNA catabolic process
ABB89_RS14605	COG1063	alcohol dehydrogenase
ABB89_RS14625	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS14635	COG0318	PFAM AMP-dependent synthetase and ligase
ABB89_RS14645	COG1522	sequence-specific DNA binding
ABB89_RS14650	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS14655	COG0307	riboflavin synthase, alpha
ABB89_RS14660	COG0154	amidase activity
ABB89_RS14680	COG2807	transmembrane transport
ABB89_RS14685	COG0590	tRNA wobble adenosine to inosine editing
ABB89_RS14695	COG0583	DNA-binding transcription factor activity
ABB89_RS14710	COG1902	pentaerythritol trinitrate reductase activity
ABB89_RS14730	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABB89_RS14735	COG0251	oxidation-reduction process
ABB89_RS14740	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB89_RS14750	COG1414	Transcriptional regulator
ABB89_RS14755	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS14770	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS14785	COG1024	Enoyl-CoA hydratase
ABB89_RS14790	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS14795	COG0154	amidase activity
ABB89_RS14835	COG3909	cytochrome
ABB89_RS14840	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABB89_RS14845	COG0625	glutathione transferase activity
ABB89_RS14850	COG0730	response to heat
ABB89_RS14855	COG0482	sulfurtransferase activity
ABB89_RS14860	COG0583	DNA-binding transcription factor activity
ABB89_RS14880	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABB89_RS14905	COG2819	hydrolase of the alpha beta superfamily
ABB89_RS14910	COG0247	lactate metabolic process
ABB89_RS14915	COG0277	FAD linked oxidase domain protein
ABB89_RS14920	COG0277	FAD linked oxidase domain protein
ABB89_RS14925	COG0277	FAD linked oxidase domain protein
ABB89_RS14930	COG3064	Membrane
ABB89_RS14930	COG3210	domain, Protein
ABB89_RS14930	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
ABB89_RS14930	COG3064	Membrane
ABB89_RS14930	COG3210	domain, Protein
ABB89_RS14930	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
ABB89_RS14935	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABB89_RS14940	COG0312	modulator of DNA gyrase
ABB89_RS14975	COG1666	GTP binding
ABB89_RS15020	COG3220	belongs to the UPF0276 family
ABB89_RS15040	COG0640	Transcriptional regulator
ABB89_RS15045	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABB89_RS15050	COG1845	cytochrome c oxidase, subunit III
ABB89_RS15055	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABB89_RS15065	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ABB89_RS15100	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS15105	COG0583	DNA-binding transcription factor activity
ABB89_RS15135	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABB89_RS15135	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABB89_RS15150	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABB89_RS15155	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABB89_RS15165	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABB89_RS15180	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABB89_RS15185	COG0316	Belongs to the HesB IscA family
ABB89_RS15195	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ABB89_RS15200	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABB89_RS15205	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABB89_RS15210	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB89_RS15215	COG0312	modulator of DNA gyrase
ABB89_RS15220	COG3028	Belongs to the UPF0307 family
ABB89_RS15235	COG1116	anion transmembrane transporter activity
ABB89_RS15240	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS15245	COG1335	isochorismatase
ABB89_RS15250	COG0346	lactoylglutathione lyase activity
ABB89_RS15255	COG0513	Belongs to the DEAD box helicase family
ABB89_RS15260	COG3069	C4-dicarboxylate transmembrane transporter activity
ABB89_RS15265	COG1802	Transcriptional regulator
ABB89_RS15280	COG1042	CoA-binding domain protein
ABB89_RS15280	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABB89_RS15280	COG0045	succinate-CoA ligase (ADP-forming) activity
ABB89_RS15285	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABB89_RS15300	COG1522	sequence-specific DNA binding
ABB89_RS15335	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABB89_RS15340	COG1696	Membrane protein involved in D-alanine export
ABB89_RS15365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABB89_RS15375	COG2264	protein methyltransferase activity
ABB89_RS15380	COG0439	Biotin carboxylase
ABB89_RS15385	COG0511	ligase activity, forming carbon-carbon bonds
ABB89_RS15390	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ABB89_RS15395	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABB89_RS15400	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABB89_RS15405	COG3150	esterase
ABB89_RS15410	COG0557	exoribonuclease II activity
ABB89_RS15420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABB89_RS15440	COG1522	sequence-specific DNA binding
ABB89_RS15445	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS15450	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS15470	COG0653	protein targeting
ABB89_RS15475	COG0739	heme binding
ABB89_RS15485	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ABB89_RS15490	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABB89_RS15500	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABB89_RS15505	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABB89_RS15510	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABB89_RS15515	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABB89_RS15525	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABB89_RS15530	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABB89_RS15535	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABB89_RS15545	COG3116	cell division
ABB89_RS15550	COG0275	rRNA processing
ABB89_RS15555	COG2001	Belongs to the MraZ family
ABB89_RS15565	COG0488	(ABC) transporter
ABB89_RS15570	COG0418	dihydroorotase activity
ABB89_RS15575	COG1473	amidohydrolase
ABB89_RS15625	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABB89_RS15630	COG4654	Cytochrome c, class I
ABB89_RS15635	COG0129	dihydroxy-acid dehydratase activity
ABB89_RS15640	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ABB89_RS15690	COG2084	Dehydrogenase
ABB89_RS15695	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABB89_RS15710	COG2096	Adenosyltransferase
ABB89_RS15720	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABB89_RS15725	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ABB89_RS15735	COG0523	cobalamin synthesis protein
ABB89_RS15740	COG0735	belongs to the Fur family
ABB89_RS15760	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABB89_RS15770	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
ABB89_RS15780	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABB89_RS15790	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ABB89_RS15795	COG1560	Kdo2-lipid A biosynthetic process
ABB89_RS15805	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABB89_RS15820	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABB89_RS15825	COG1950	PFAM Membrane protein of
ABB89_RS15840	COG0583	DNA-binding transcription factor activity
ABB89_RS15850	COG0477	Major facilitator Superfamily
ABB89_RS15865	COG0617	tRNA 3'-terminal CCA addition
ABB89_RS15875	COG0513	Belongs to the DEAD box helicase family
ABB89_RS15880	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ABB89_RS15895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB89_RS15900	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABB89_RS15960	COG1280	lysine exporter protein (LysE YggA)
ABB89_RS15975	COG0405	Gamma-glutamyltransferase
ABB89_RS15985	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS16015	COG1309	transcriptional regulator
ABB89_RS16025	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS16035	COG0745	RESPONSE REGULATOR receiver
ABB89_RS16100	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABB89_RS16125	COG0582	viral genome integration into host DNA
ABB89_RS16130	COG0012	GTP binding
ABB89_RS16140	COG0193	aminoacyl-tRNA hydrolase activity
ABB89_RS16145	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ABB89_RS16150	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABB89_RS16160	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ABB89_RS16165	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABB89_RS16175	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ABB89_RS16200	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
ABB89_RS16210	COG1368	sulfuric ester hydrolase activity
ABB89_RS16215	COG0642	Histidine kinase
ABB89_RS16220	COG0745	RESPONSE REGULATOR receiver
ABB89_RS16225	COG0277	FAD linked oxidase domain protein
ABB89_RS16240	COG0166	Belongs to the GPI family
ABB89_RS16245	COG0438	transferase activity, transferring glycosyl groups
ABB89_RS16250	COG0438	transferase activity, transferring glycosyl groups
ABB89_RS16265	COG0438	transferase activity, transferring glycosyl groups
ABB89_RS16280	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABB89_RS16285	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABB89_RS16290	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ABB89_RS16300	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ABB89_RS16310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB89_RS16315	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABB89_RS16325	COG0747	negative chemotaxis
ABB89_RS16330	COG0601	transmembrane transport
ABB89_RS16335	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS16355	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ABB89_RS16360	COG0830	nickel cation binding
ABB89_RS16370	COG0804	urea catabolic process
ABB89_RS16375	COG0832	Belongs to the urease beta subunit family
ABB89_RS16385	COG0831	urea catabolic process
ABB89_RS16390	COG0829	nickel cation binding
ABB89_RS16400	COG0633	Ferredoxin
ABB89_RS16415	COG2188	Transcriptional regulator
ABB89_RS16440	COG2719	SpoVR family
ABB89_RS16445	COG2718	Belongs to the UPF0229 family
ABB89_RS16460	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS16465	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS16480	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS16525	COG0183	Belongs to the thiolase family
ABB89_RS16530	COG2030	dehydratase
ABB89_RS16585	COG0328	RNA-DNA hybrid ribonuclease activity
ABB89_RS16590	COG2226	methyltransferase
ABB89_RS16595	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABB89_RS16600	COG0741	lytic transglycosylase activity
ABB89_RS16600	COG1388	LysM domain
ABB89_RS16620	COG2979	Protein of unknown function (DUF533)
ABB89_RS16655	COG1271	oxidase subunit
ABB89_RS16660	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABB89_RS16665	COG0850	regulation of cytokinetic process
ABB89_RS16670	COG2894	cell division
ABB89_RS16675	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
ABB89_RS16695	COG0488	(ABC) transporter
ABB89_RS16710	COG0601	transmembrane transport
ABB89_RS16720	COG1215	transferase activity, transferring glycosyl groups
ABB89_RS16735	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABB89_RS16745	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABB89_RS16765	COG0318	PFAM AMP-dependent synthetase and ligase
ABB89_RS16770	COG2188	Transcriptional regulator
ABB89_RS16775	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABB89_RS16780	COG2814	Major facilitator Superfamily
ABB89_RS16790	COG0259	pyridoxamine-phosphate oxidase activity
ABB89_RS16795	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABB89_RS16810	COG0583	DNA-binding transcription factor activity
ABB89_RS16815	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS16835	COG0134	indole-3-glycerol-phosphate synthase activity
ABB89_RS16840	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABB89_RS16845	COG0512	Glutamine amidotransferase of anthranilate synthase
ABB89_RS16855	COG0546	phosphoglycolate phosphatase activity
ABB89_RS16860	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABB89_RS16865	COG2967	ApaG domain
ABB89_RS16870	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
ABB89_RS16875	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABB89_RS16880	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABB89_RS16885	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABB89_RS16895	COG0037	tRNA processing
ABB89_RS16905	COG3634	alkyl hydroperoxide reductase activity
ABB89_RS16910	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABB89_RS16915	COG1024	Enoyl-CoA hydratase
ABB89_RS16940	COG0356	it plays a direct role in the translocation of protons across the membrane
ABB89_RS16950	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ABB89_RS16955	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABB89_RS16960	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ABB89_RS16965	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ABB89_RS16970	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ABB89_RS16975	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ABB89_RS16985	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ABB89_RS16990	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABB89_RS16995	COG0210	DNA helicase
ABB89_RS17005	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABB89_RS17015	COG4172	Belongs to the ABC transporter superfamily
ABB89_RS17020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS17025	COG0601	transmembrane transport
ABB89_RS17045	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABB89_RS17050	COG1024	Enoyl-CoA hydratase
ABB89_RS17055	COG1024	Enoyl-CoA hydratase
ABB89_RS17080	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB89_RS17110	COG2132	Multicopper oxidase
ABB89_RS17120	COG1024	Enoyl-CoA hydratase
ABB89_RS17120	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB89_RS17130	COG1414	Transcriptional regulator
ABB89_RS17140	COG0154	amidase activity
ABB89_RS17170	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB89_RS17175	COG3568	Endonuclease Exonuclease Phosphatase
ABB89_RS17180	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ABB89_RS17215	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ABB89_RS17225	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABB89_RS17240	COG1137	ATPase activity
ABB89_RS17245	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ABB89_RS17255	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ABB89_RS17260	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABB89_RS17260	COG2010	Cytochrome c
ABB89_RS17270	COG1660	Displays ATPase and GTPase activities
ABB89_RS17275	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABB89_RS17310	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS17320	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABB89_RS17325	COG2890	protein-(glutamine-N5) methyltransferase activity
ABB89_RS17330	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABB89_RS17335	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABB89_RS17385	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS17395	COG0183	Belongs to the thiolase family
ABB89_RS17400	COG1522	sequence-specific DNA binding
ABB89_RS17405	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABB89_RS17425	COG1024	Enoyl-CoA hydratase
ABB89_RS17440	COG0604	alcohol dehydrogenase
ABB89_RS17460	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABB89_RS17470	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS17475	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS17480	COG0277	FAD linked oxidase domain protein
ABB89_RS17490	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS17515	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABB89_RS17525	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS17530	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS17535	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS17555	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABB89_RS17560	COG1024	Enoyl-CoA hydratase
ABB89_RS17565	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS17585	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABB89_RS17590	COG0022	dehydrogenase e1 component
ABB89_RS17595	COG1024	Enoyl-CoA hydratase
ABB89_RS17600	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABB89_RS17620	COG0683	leucine binding
ABB89_RS17625	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABB89_RS17630	COG0411	ABC transporter
ABB89_RS17640	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABB89_RS17655	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS17685	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ABB89_RS17690	COG0793	Belongs to the peptidase S41A family
ABB89_RS17695	COG4942	peptidase
ABB89_RS17700	COG0588	phosphoglycerate mutase activity
ABB89_RS17705	COG1054	Belongs to the UPF0176 family
ABB89_RS17710	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABB89_RS17715	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
ABB89_RS17720	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABB89_RS17725	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS17740	COG2226	methyltransferase
ABB89_RS17745	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
ABB89_RS17760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS17765	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABB89_RS17790	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB89_RS17815	COG1335	isochorismatase
ABB89_RS17820	COG2309	aminopeptidase activity
ABB89_RS17825	COG0596	Alpha beta hydrolase
ABB89_RS17830	COG3473	Maleate cis-trans isomerase
ABB89_RS17840	COG2068	MobA-Related Protein
ABB89_RS17865	COG2204	response regulator
ABB89_RS17870	COG5000	phosphorelay sensor kinase activity
ABB89_RS17880	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABB89_RS17880	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ABB89_RS17890	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
ABB89_RS17920	COG0583	DNA-binding transcription factor activity
ABB89_RS17935	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ABB89_RS17940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB89_RS17945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS17960	COG0758	DNA mediated transformation
ABB89_RS17965	COG1522	sequence-specific DNA binding
ABB89_RS17975	COG0242	peptide deformylase activity
ABB89_RS17990	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABB89_RS18000	COG0546	phosphoglycolate phosphatase activity
ABB89_RS18020	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABB89_RS18025	COG1942	4-Oxalocrotonate Tautomerase
ABB89_RS18030	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB89_RS18055	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABB89_RS18075	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABB89_RS18080	COG1024	Enoyl-CoA hydratase
ABB89_RS18085	COG1414	Transcriptional regulator
ABB89_RS18090	COG0318	PFAM AMP-dependent synthetase and ligase
ABB89_RS18095	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS18125	COG0583	DNA-binding transcription factor activity
ABB89_RS18140	COG3422	double-strand break repair
ABB89_RS18145	COG0330	HflC and HflK could
ABB89_RS18155	COG0251	oxidation-reduction process
ABB89_RS18200	COG3723	Recombinational DNA repair protein, rece pathway
ABB89_RS18235	COG0582	viral genome integration into host DNA
ABB89_RS18260	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABB89_RS18270	COG0706	membrane insertase activity
ABB89_RS18275	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ABB89_RS18280	COG0594	ribonuclease P activity
ABB89_RS18285	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABB89_RS18290	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABB89_RS18305	COG1414	Transcriptional regulator
ABB89_RS18310	COG0154	amidase activity
ABB89_RS18325	COG1304	FMN binding
ABB89_RS18345	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS18365	COG1960	acyl-CoA dehydrogenase activity
ABB89_RS18380	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABB89_RS18395	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABB89_RS18400	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS18410	COG2358	TRAP transporter, solute receptor (TAXI family
ABB89_RS18420	COG1629	transport
ABB89_RS18425	COG2922	Belongs to the Smg family
ABB89_RS18450	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABB89_RS18455	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS18460	COG1028	Short-chain dehydrogenase reductase Sdr
ABB89_RS18465	COG1012	belongs to the aldehyde dehydrogenase family
ABB89_RS18475	COG0028	Belongs to the TPP enzyme family
ABB89_RS18480	COG1522	sequence-specific DNA binding
ABB89_RS18485	COG3781	membrane
ABB89_RS18495	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABB89_RS18515	COG4206	TonB-dependent receptor
ABB89_RS18520	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABB89_RS18525	COG2022	thiamine diphosphate biosynthetic process
ABB89_RS18530	COG0351	phosphomethylpyrimidine kinase
ABB89_RS18535	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABB89_RS18550	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ABB89_RS18560	COG0628	permease
ABB89_RS18570	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABB89_RS18580	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ABB89_RS18585	COG0049	tRNA binding
ABB89_RS18590	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABB89_RS18595	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABB89_RS18600	COG0051	transcription antitermination factor activity, RNA binding
ABB89_RS18605	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABB89_RS18610	COG0088	Forms part of the polypeptide exit tunnel
ABB89_RS18615	COG0089	rRNA binding
ABB89_RS18620	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABB89_RS18625	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ABB89_RS18630	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABB89_RS18635	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABB89_RS18640	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ABB89_RS18645	COG0255	Belongs to the universal ribosomal protein uL29 family
ABB89_RS18650	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABB89_RS18670	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABB89_RS18675	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABB89_RS18680	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABB89_RS18685	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABB89_RS18690	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABB89_RS18695	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABB89_RS18700	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ABB89_RS18705	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABB89_RS18710	COG1841	ribosomal large subunit assembly
ABB89_RS18715	COG0200	Binds to the 23S rRNA
ABB89_RS18720	COG0201	protein transport
ABB89_RS18725	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABB89_RS18730	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABB89_RS18735	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ABB89_RS18740	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABB89_RS18745	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABB89_RS18750	COG0202	RNA polymerase activity
ABB89_RS18755	COG0203	ribosomal protein L17
ABB89_RS18760	COG0537	adenosine 5'-monophosphoramidase activity
ABB89_RS18765	COG1324	tolerance protein
ABB89_RS18770	COG4232	protein-disulfide reductase activity
ABB89_RS18785	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABB89_RS18795	COG1333	cytochrome c biogenesis protein
ABB89_RS18800	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABB89_RS18815	COG1965	Belongs to the frataxin family
ABB89_RS18825	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ABB89_RS18830	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ABB89_RS18835	COG0232	Belongs to the dGTPase family. Type 2 subfamily
ABB89_RS18850	COG2814	Major facilitator Superfamily
ABB89_RS18855	COG0629	single-stranded DNA binding
ABB89_RS18895	COG0402	S-adenosylhomocysteine deaminase activity
ABB89_RS18905	COG0438	transferase activity, transferring glycosyl groups
ABB89_RS18925	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS18950	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABB89_RS18955	COG2186	Transcriptional regulator
ABB89_RS18975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB89_RS18980	COG1956	GAF domain-containing protein
ABB89_RS18985	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABB89_RS19000	COG1652	LysM domain
ABB89_RS19015	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABB89_RS19030	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABB89_RS19060	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS19075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS19090	COG1024	Enoyl-CoA hydratase
ABB89_RS19105	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS19110	COG1309	transcriptional regulator
ABB89_RS19115	COG2816	NAD+ diphosphatase activity
ABB89_RS19120	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABB89_RS19205	COG2814	Major facilitator Superfamily
ABB89_RS19210	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ABB89_RS19230	COG1999	signal sequence binding
ABB89_RS19235	COG0109	protoheme IX farnesyltransferase activity
ABB89_RS19275	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABB89_RS19295	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABB89_RS19300	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABB89_RS19310	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ABB89_RS19315	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABB89_RS19325	COG0069	glutamate synthase activity
ABB89_RS19325	COG0070	glutamate synthase
ABB89_RS19325	COG0067	glutamate synthase
ABB89_RS19335	COG3047	cAMP biosynthetic process
ABB89_RS19345	COG1127	ABC transporter
ABB89_RS19350	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABB89_RS19355	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABB89_RS19360	COG2853	Lipoprotein
ABB89_RS19370	COG1131	(ABC) transporter
ABB89_RS19375	COG0842	Transport permease protein
ABB89_RS19385	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABB89_RS19390	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABB89_RS19395	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABB89_RS19400	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABB89_RS19405	COG0131	Imidazoleglycerol-phosphate dehydratase
ABB89_RS19410	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABB89_RS19415	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ABB89_RS19420	COG0107	imidazoleglycerol-phosphate synthase activity
ABB89_RS19425	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABB89_RS19430	COG0140	phosphoribosyl-ATP diphosphatase activity
ABB89_RS19435	COG0537	adenosine 5'-monophosphoramidase activity
ABB89_RS19440	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABB89_RS19445	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABB89_RS19460	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS19495	COG3702	type iv secretory pathway
ABB89_RS19500	COG3451	type IV secretory pathway VirB4
ABB89_RS19515	COG3736	Type IV secretory pathway, component VirB8
ABB89_RS19520	COG3504	Conjugal transfer protein
ABB89_RS19525	COG2948	multi-organism process
ABB89_RS19530	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
ABB89_RS19540	COG0697	spore germination
ABB89_RS19560	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABB89_RS19565	COG0747	negative chemotaxis
ABB89_RS19570	COG0601	transmembrane transport
ABB89_RS19575	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB89_RS19580	COG0444	Belongs to the ABC transporter superfamily
ABB89_RS19590	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABB89_RS19600	COG0494	nUDIX hydrolase
ABB89_RS19640	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
ABB89_RS19645	COG0237	dephospho-CoA kinase activity
ABB89_RS19650	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ABB89_RS19665	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ABB89_RS19670	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABB89_RS19680	COG0477	Major facilitator Superfamily
ABB89_RS19685	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABB89_RS19700	COG1126	abc transporter atp-binding protein
ABB89_RS19705	COG0765	amino acid transport
ABB89_RS19710	COG4597	amino acid ABC transporter
ABB89_RS19715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB89_RS19720	COG2884	Cell division ATP-binding protein ftsE
ABB89_RS19725	COG2177	Part of the ABC transporter FtsEX involved in
ABB89_RS19730	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ABB89_RS19740	COG1194	a g-specific adenine glycosylase
ABB89_RS19750	COG2226	methyltransferase
ABB89_RS19760	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS19765	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS19780	COG1024	Enoyl-CoA hydratase
ABB89_RS19800	COG1024	Enoyl-CoA hydratase
ABB89_RS19805	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB89_RS19810	COG3181	Tripartite tricarboxylate transporter family receptor
ABB89_RS19820	COG0753	catalase activity
ABB89_RS19825	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB89_RS19830	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABB89_RS19840	COG2175	clavaminate synthase activity
ABB89_RS19845	COG1473	amidohydrolase
ABB89_RS19850	COG4608	Belongs to the ABC transporter superfamily
ABB89_RS19855	COG0444	Belongs to the ABC transporter superfamily
ABB89_RS19870	COG0747	negative chemotaxis
ABB89_RS19875	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABB89_RS19910	COG0436	Aminotransferase
ABB89_RS19915	COG1278	Cold shock