locus-tag	class	description
ABB96_RS00005	COG0445	tRNA wobble uridine modification
ABB96_RS00010	COG0357	Ribosomal RNA small subunit methyltransferase G
ABB96_RS00015	COG1192	Involved in chromosome partitioning
ABB96_RS00025	COG1475	DNA binding
ABB96_RS00030	COG0252	asparaginase activity
ABB96_RS00055	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABB96_RS00065	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABB96_RS00075	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABB96_RS00080	COG0081	regulation of translation
ABB96_RS00085	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABB96_RS00090	COG0222	ribosome binding
ABB96_RS00095	COG0085	RNA polymerase activity
ABB96_RS00100	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABB96_RS00140	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS00165	COG1024	Enoyl-CoA hydratase
ABB96_RS00185	COG0752	glycyl-tRNA synthetase alpha subunit
ABB96_RS00190	COG0751	glycine-tRNA ligase activity
ABB96_RS00195	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ABB96_RS00200	COG0204	Acyl-transferase
ABB96_RS00215	COG0242	peptide deformylase activity
ABB96_RS00250	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ABB96_RS00255	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABB96_RS00260	COG2813	Specifically methylates the guanine in position
ABB96_RS00260	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABB96_RS00275	COG2223	nitrite transmembrane transporter activity
ABB96_RS00285	COG1794	racemase activity, acting on amino acids and derivatives
ABB96_RS00290	COG1126	abc transporter atp-binding protein
ABB96_RS00295	COG0765	amino acid transport
ABB96_RS00300	COG0765	amino acid transport
ABB96_RS00305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS00370	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB96_RS00400	COG0326	Molecular chaperone. Has ATPase activity
ABB96_RS00405	COG0625	glutathione transferase activity
ABB96_RS00420	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABB96_RS00425	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABB96_RS00455	COG0438	transferase activity, transferring glycosyl groups
ABB96_RS00460	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABB96_RS00465	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABB96_RS00495	COG0859	PFAM glycosyl transferase family 9
ABB96_RS00510	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ABB96_RS00520	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABB96_RS00525	COG1127	ABC transporter
ABB96_RS00545	COG1686	Belongs to the peptidase S11 family
ABB96_RS00555	COG2921	Belongs to the UPF0250 family
ABB96_RS00560	COG0321	lipoyl(octanoyl) transferase activity
ABB96_RS00565	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABB96_RS00600	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABB96_RS00610	COG0018	arginyl-trna synthetase
ABB96_RS00630	COG0395	ABC-type sugar transport system, permease component
ABB96_RS00635	COG1175	transmembrane transport
ABB96_RS00640	COG1653	transport
ABB96_RS00645	COG3842	ATPase activity
ABB96_RS00650	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABB96_RS00660	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABB96_RS00680	COG1609	Transcriptional regulator
ABB96_RS00690	COG0154	amidase activity
ABB96_RS00695	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABB96_RS00705	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ABB96_RS00715	COG0583	DNA-binding transcription factor activity
ABB96_RS00730	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB96_RS00735	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABB96_RS00750	COG1802	Transcriptional regulator
ABB96_RS00765	COG1024	Enoyl-CoA hydratase
ABB96_RS00775	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS00790	COG1984	allophanate hydrolase subunit 2
ABB96_RS00795	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ABB96_RS00805	COG0583	DNA-binding transcription factor activity
ABB96_RS00810	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABB96_RS00820	COG5002	protein histidine kinase activity
ABB96_RS00830	COG5002	protein histidine kinase activity
ABB96_RS00835	COG0745	RESPONSE REGULATOR receiver
ABB96_RS00840	COG2226	methyltransferase
ABB96_RS00855	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABB96_RS00875	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABB96_RS00885	COG0513	Belongs to the DEAD box helicase family
ABB96_RS00890	COG1280	lysine exporter protein (LysE YggA)
ABB96_RS00895	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABB96_RS00930	COG1054	Belongs to the UPF0176 family
ABB96_RS00935	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABB96_RS00935	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABB96_RS00945	COG0489	protein tyrosine kinase activity
ABB96_RS00960	COG0717	Belongs to the dCTP deaminase family
ABB96_RS00990	COG2081	HI0933 family
ABB96_RS01000	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABB96_RS01010	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ABB96_RS01015	COG0509	glycine decarboxylation via glycine cleavage system
ABB96_RS01020	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABB96_RS01020	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABB96_RS01060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABB96_RS01075	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABB96_RS01085	COG1414	Transcriptional regulator
ABB96_RS01090	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS01095	COG2031	fatty acid transporter
ABB96_RS01100	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB96_RS01110	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
ABB96_RS01115	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABB96_RS01125	COG4257	antibiotic catabolic process
ABB96_RS01150	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS01155	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ABB96_RS01160	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABB96_RS01185	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS01195	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABB96_RS01210	COG2188	Transcriptional regulator
ABB96_RS01215	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB96_RS01240	COG0617	tRNA 3'-terminal CCA addition
ABB96_RS01255	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ABB96_RS01260	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABB96_RS01270	COG0586	Pfam SNARE associated Golgi protein
ABB96_RS01275	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABB96_RS01280	COG0802	atpase or kinase
ABB96_RS01285	COG0114	fumarate hydratase activity
ABB96_RS01295	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS01305	COG0405	Gamma-glutamyltransferase
ABB96_RS01310	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS01320	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS01345	COG1294	oxidase, subunit
ABB96_RS01355	COG4988	ABC transporter
ABB96_RS01360	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ABB96_RS01365	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABB96_RS01380	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB96_RS01410	COG2969	positive regulation of protein catabolic process
ABB96_RS01415	COG0625	glutathione transferase activity
ABB96_RS01420	COG2857	Cytochrome c1
ABB96_RS01425	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ABB96_RS01430	COG0723	plastoquinol--plastocyanin reductase activity
ABB96_RS01435	COG1970	mechanosensitive ion channel activity
ABB96_RS01440	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABB96_RS01455	COG2808	Putative FMN-binding domain
ABB96_RS01460	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABB96_RS01465	COG0747	negative chemotaxis
ABB96_RS01470	COG0657	acetylesterase activity
ABB96_RS01480	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABB96_RS01485	COG2207	Transcriptional regulator
ABB96_RS01490	COG0129	dihydroxy-acid dehydratase activity
ABB96_RS01495	COG2814	Major facilitator Superfamily
ABB96_RS01500	COG0583	DNA-binding transcription factor activity
ABB96_RS01510	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
ABB96_RS01580	COG1024	Enoyl-CoA hydratase
ABB96_RS01585	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS01610	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ABB96_RS01615	COG0352	thiamine-phosphate diphosphorylase activity
ABB96_RS01620	COG0351	phosphomethylpyrimidine kinase
ABB96_RS01630	COG1678	Uncharacterized ACR, COG1678
ABB96_RS01635	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABB96_RS01640	COG0540	Belongs to the ATCase OTCase family
ABB96_RS01655	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABB96_RS01665	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABB96_RS01700	COG1234	tRNA 3'-trailer cleavage
ABB96_RS01720	COG3064	Membrane
ABB96_RS01750	COG1683	Conserved Protein
ABB96_RS01755	COG1120	ATPase activity
ABB96_RS01760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABB96_RS01765	COG4558	Periplasmic binding protein
ABB96_RS01770	COG3720	iron ion transport
ABB96_RS01780	COG3712	iron ion homeostasis
ABB96_RS01785	COG1595	DNA-templated transcription, initiation
ABB96_RS01820	COG1802	Transcriptional regulator
ABB96_RS01830	COG3069	C4-dicarboxylate transmembrane transporter activity
ABB96_RS01840	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS01875	COG2860	membrane
ABB96_RS01880	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABB96_RS01885	COG0708	Exodeoxyribonuclease III
ABB96_RS01890	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABB96_RS01895	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABB96_RS01900	COG0154	amidase activity
ABB96_RS01905	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABB96_RS01910	COG1077	Cell shape determining protein MreB Mrl
ABB96_RS01915	COG1792	Involved in formation and maintenance of cell shape
ABB96_RS01925	COG0768	penicillin binding
ABB96_RS01930	COG0772	Belongs to the SEDS family
ABB96_RS01935	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ABB96_RS01940	COG0471	metal ion transport
ABB96_RS01945	COG1309	transcriptional regulator
ABB96_RS01955	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABB96_RS01970	COG2823	Periplasmic or secreted lipoprotein
ABB96_RS01975	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
ABB96_RS01990	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABB96_RS02010	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS02020	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS02040	COG0492	ferredoxin-NADP+ reductase activity
ABB96_RS02050	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS02055	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB96_RS02055	COG1024	Enoyl-CoA hydratase
ABB96_RS02060	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS02065	COG0028	Belongs to the TPP enzyme family
ABB96_RS02090	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS02100	COG0697	spore germination
ABB96_RS02130	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ABB96_RS02135	COG0463	Glycosyl transferase, family 2
ABB96_RS02155	COG0786	glutamate:sodium symporter activity
ABB96_RS02165	COG2031	fatty acid transporter
ABB96_RS02180	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABB96_RS02185	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABB96_RS02210	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS02220	COG0277	FAD linked oxidase domain protein
ABB96_RS02225	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS02230	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS02240	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABB96_RS02255	COG2072	flavoprotein involved in K transport
ABB96_RS02260	COG0604	alcohol dehydrogenase
ABB96_RS02275	COG1024	Enoyl-CoA hydratase
ABB96_RS02295	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABB96_RS02300	COG1522	sequence-specific DNA binding
ABB96_RS02305	COG0183	Belongs to the thiolase family
ABB96_RS02315	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS02355	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABB96_RS02360	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABB96_RS02365	COG2890	protein-(glutamine-N5) methyltransferase activity
ABB96_RS02370	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABB96_RS02380	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS02415	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABB96_RS02420	COG1660	Displays ATPase and GTPase activities
ABB96_RS02430	COG2010	Cytochrome c
ABB96_RS02430	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABB96_RS02435	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ABB96_RS02445	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ABB96_RS02450	COG1137	ATPase activity
ABB96_RS02465	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABB96_RS02475	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ABB96_RS02510	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ABB96_RS02515	COG3568	Endonuclease Exonuclease Phosphatase
ABB96_RS02520	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB96_RS02550	COG0154	amidase activity
ABB96_RS02560	COG1414	Transcriptional regulator
ABB96_RS02570	COG1024	Enoyl-CoA hydratase
ABB96_RS02570	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB96_RS02580	COG2132	Multicopper oxidase
ABB96_RS02610	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB96_RS02635	COG1024	Enoyl-CoA hydratase
ABB96_RS02640	COG1024	Enoyl-CoA hydratase
ABB96_RS02645	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABB96_RS02665	COG0601	transmembrane transport
ABB96_RS02670	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS02675	COG4172	Belongs to the ABC transporter superfamily
ABB96_RS02685	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABB96_RS02695	COG0210	DNA helicase
ABB96_RS02700	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABB96_RS02705	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ABB96_RS02715	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ABB96_RS02720	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ABB96_RS02725	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ABB96_RS02730	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ABB96_RS02735	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABB96_RS02740	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ABB96_RS02750	COG0356	it plays a direct role in the translocation of protons across the membrane
ABB96_RS02775	COG1024	Enoyl-CoA hydratase
ABB96_RS02780	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABB96_RS02785	COG3634	alkyl hydroperoxide reductase activity
ABB96_RS02795	COG0037	tRNA processing
ABB96_RS02805	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABB96_RS02810	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABB96_RS02815	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABB96_RS02820	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
ABB96_RS02825	COG2967	ApaG domain
ABB96_RS02830	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABB96_RS02835	COG0546	phosphoglycolate phosphatase activity
ABB96_RS02845	COG0512	Glutamine amidotransferase of anthranilate synthase
ABB96_RS02850	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABB96_RS02855	COG0134	indole-3-glycerol-phosphate synthase activity
ABB96_RS02875	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS02880	COG0583	DNA-binding transcription factor activity
ABB96_RS02895	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABB96_RS02900	COG0259	pyridoxamine-phosphate oxidase activity
ABB96_RS02910	COG2814	Major facilitator Superfamily
ABB96_RS02915	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABB96_RS02920	COG2188	Transcriptional regulator
ABB96_RS02925	COG0318	PFAM AMP-dependent synthetase and ligase
ABB96_RS02945	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABB96_RS02955	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABB96_RS02970	COG1215	transferase activity, transferring glycosyl groups
ABB96_RS02980	COG0601	transmembrane transport
ABB96_RS02995	COG0488	(ABC) transporter
ABB96_RS03015	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
ABB96_RS03020	COG2894	cell division
ABB96_RS03025	COG0850	regulation of cytokinetic process
ABB96_RS03030	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABB96_RS03035	COG1271	oxidase subunit
ABB96_RS03070	COG2979	Protein of unknown function (DUF533)
ABB96_RS03090	COG1388	LysM domain
ABB96_RS03090	COG0741	lytic transglycosylase activity
ABB96_RS03095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABB96_RS03100	COG2226	methyltransferase
ABB96_RS03105	COG0328	RNA-DNA hybrid ribonuclease activity
ABB96_RS03155	COG2030	dehydratase
ABB96_RS03160	COG0183	Belongs to the thiolase family
ABB96_RS03205	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS03220	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS03225	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS03240	COG2718	Belongs to the UPF0229 family
ABB96_RS03245	COG2719	SpoVR family
ABB96_RS03270	COG2188	Transcriptional regulator
ABB96_RS03285	COG0633	Ferredoxin
ABB96_RS03295	COG0829	nickel cation binding
ABB96_RS03300	COG0831	urea catabolic process
ABB96_RS03310	COG0832	Belongs to the urease beta subunit family
ABB96_RS03315	COG0804	urea catabolic process
ABB96_RS03325	COG0830	nickel cation binding
ABB96_RS03330	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ABB96_RS03350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS03355	COG0601	transmembrane transport
ABB96_RS03360	COG0747	negative chemotaxis
ABB96_RS03370	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABB96_RS03375	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB96_RS03385	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ABB96_RS03395	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ABB96_RS03400	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABB96_RS03405	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABB96_RS03420	COG0438	transferase activity, transferring glycosyl groups
ABB96_RS03435	COG0438	transferase activity, transferring glycosyl groups
ABB96_RS03440	COG0438	transferase activity, transferring glycosyl groups
ABB96_RS03445	COG0166	Belongs to the GPI family
ABB96_RS03460	COG0277	FAD linked oxidase domain protein
ABB96_RS03465	COG0745	RESPONSE REGULATOR receiver
ABB96_RS03470	COG0642	Histidine kinase
ABB96_RS03475	COG1368	sulfuric ester hydrolase activity
ABB96_RS03485	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
ABB96_RS03510	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ABB96_RS03520	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABB96_RS03525	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ABB96_RS03535	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABB96_RS03540	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ABB96_RS03545	COG0193	aminoacyl-tRNA hydrolase activity
ABB96_RS03555	COG0012	GTP binding
ABB96_RS03560	COG0582	viral genome integration into host DNA
ABB96_RS03585	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABB96_RS03645	COG0745	RESPONSE REGULATOR receiver
ABB96_RS03660	COG1309	transcriptional regulator
ABB96_RS03690	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS03700	COG0405	Gamma-glutamyltransferase
ABB96_RS03715	COG1280	lysine exporter protein (LysE YggA)
ABB96_RS03775	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABB96_RS03780	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB96_RS03790	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ABB96_RS03795	COG0513	Belongs to the DEAD box helicase family
ABB96_RS03805	COG0617	tRNA 3'-terminal CCA addition
ABB96_RS03820	COG0477	Major facilitator Superfamily
ABB96_RS03830	COG0583	DNA-binding transcription factor activity
ABB96_RS03845	COG1950	PFAM Membrane protein of
ABB96_RS03850	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABB96_RS03865	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABB96_RS03875	COG1560	Kdo2-lipid A biosynthetic process
ABB96_RS03880	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ABB96_RS03890	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABB96_RS03900	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
ABB96_RS03910	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABB96_RS03930	COG0735	belongs to the Fur family
ABB96_RS03935	COG0523	cobalamin synthesis protein
ABB96_RS03945	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ABB96_RS03950	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABB96_RS03960	COG2096	Adenosyltransferase
ABB96_RS03975	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABB96_RS03980	COG2084	Dehydrogenase
ABB96_RS04030	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ABB96_RS04035	COG0129	dihydroxy-acid dehydratase activity
ABB96_RS04040	COG4654	Cytochrome c, class I
ABB96_RS04045	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABB96_RS04095	COG1473	amidohydrolase
ABB96_RS04100	COG0418	dihydroorotase activity
ABB96_RS04105	COG0488	(ABC) transporter
ABB96_RS04115	COG2001	Belongs to the MraZ family
ABB96_RS04120	COG0275	rRNA processing
ABB96_RS04125	COG3116	cell division
ABB96_RS04135	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABB96_RS04140	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABB96_RS04145	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABB96_RS04155	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABB96_RS04160	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABB96_RS04165	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABB96_RS04170	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABB96_RS04180	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABB96_RS04185	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ABB96_RS04195	COG0739	heme binding
ABB96_RS04200	COG0653	protein targeting
ABB96_RS04220	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS04225	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS04230	COG1522	sequence-specific DNA binding
ABB96_RS04250	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABB96_RS04260	COG0557	exoribonuclease II activity
ABB96_RS04265	COG3150	esterase
ABB96_RS04270	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABB96_RS04275	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABB96_RS04280	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ABB96_RS04285	COG0511	ligase activity, forming carbon-carbon bonds
ABB96_RS04290	COG0439	Biotin carboxylase
ABB96_RS04295	COG2264	protein methyltransferase activity
ABB96_RS04305	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABB96_RS04330	COG1696	Membrane protein involved in D-alanine export
ABB96_RS04335	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABB96_RS04370	COG1522	sequence-specific DNA binding
ABB96_RS04385	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABB96_RS04390	COG1042	CoA-binding domain protein
ABB96_RS04390	COG0045	succinate-CoA ligase (ADP-forming) activity
ABB96_RS04390	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABB96_RS04405	COG1802	Transcriptional regulator
ABB96_RS04410	COG3069	C4-dicarboxylate transmembrane transporter activity
ABB96_RS04415	COG0513	Belongs to the DEAD box helicase family
ABB96_RS04420	COG0346	lactoylglutathione lyase activity
ABB96_RS04425	COG1335	isochorismatase
ABB96_RS04430	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS04435	COG1116	anion transmembrane transporter activity
ABB96_RS04450	COG3028	Belongs to the UPF0307 family
ABB96_RS04455	COG0312	modulator of DNA gyrase
ABB96_RS04460	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB96_RS04465	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABB96_RS04470	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABB96_RS04475	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ABB96_RS04485	COG0316	Belongs to the HesB IscA family
ABB96_RS04490	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABB96_RS04505	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABB96_RS04515	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABB96_RS04520	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABB96_RS04535	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABB96_RS04535	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABB96_RS04565	COG0583	DNA-binding transcription factor activity
ABB96_RS04570	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS04605	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ABB96_RS04615	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABB96_RS04620	COG1845	cytochrome c oxidase, subunit III
ABB96_RS04625	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABB96_RS04630	COG0640	Transcriptional regulator
ABB96_RS04650	COG3220	belongs to the UPF0276 family
ABB96_RS04695	COG1666	GTP binding
ABB96_RS04730	COG0312	modulator of DNA gyrase
ABB96_RS04735	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABB96_RS04745	COG0277	FAD linked oxidase domain protein
ABB96_RS04750	COG0277	FAD linked oxidase domain protein
ABB96_RS04755	COG0277	FAD linked oxidase domain protein
ABB96_RS04760	COG0247	lactate metabolic process
ABB96_RS04765	COG2819	hydrolase of the alpha beta superfamily
ABB96_RS04790	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABB96_RS04810	COG0583	DNA-binding transcription factor activity
ABB96_RS04815	COG0482	sulfurtransferase activity
ABB96_RS04820	COG0730	response to heat
ABB96_RS04825	COG0625	glutathione transferase activity
ABB96_RS04830	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABB96_RS04835	COG3909	cytochrome
ABB96_RS04875	COG0154	amidase activity
ABB96_RS04880	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS04885	COG1024	Enoyl-CoA hydratase
ABB96_RS04900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS04915	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS04920	COG1414	Transcriptional regulator
ABB96_RS04930	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB96_RS04935	COG0251	oxidation-reduction process
ABB96_RS04940	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABB96_RS04960	COG1902	pentaerythritol trinitrate reductase activity
ABB96_RS04975	COG0583	DNA-binding transcription factor activity
ABB96_RS04985	COG0590	tRNA wobble adenosine to inosine editing
ABB96_RS04990	COG2807	transmembrane transport
ABB96_RS05010	COG0154	amidase activity
ABB96_RS05015	COG0307	riboflavin synthase, alpha
ABB96_RS05020	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS05025	COG1522	sequence-specific DNA binding
ABB96_RS05035	COG0318	PFAM AMP-dependent synthetase and ligase
ABB96_RS05045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS05065	COG1063	alcohol dehydrogenase
ABB96_RS05090	COG1418	mRNA catabolic process
ABB96_RS05095	COG1448	Aminotransferase
ABB96_RS05100	COG0583	DNA-binding transcription factor activity
ABB96_RS05110	COG0477	Major facilitator Superfamily
ABB96_RS05115	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS05130	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB96_RS05135	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ABB96_RS05140	COG0583	DNA-binding transcription factor activity
ABB96_RS05200	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS05205	COG1309	transcriptional regulator
ABB96_RS05215	COG2982	Protein involved in outer membrane biogenesis
ABB96_RS05220	COG2818	Glycosylase
ABB96_RS05240	COG1653	transport
ABB96_RS05250	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABB96_RS05255	COG3842	ATPase activity
ABB96_RS05260	COG0395	ABC-type sugar transport system, permease component
ABB96_RS05265	COG1175	transmembrane transport
ABB96_RS05285	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS05290	COG2186	Transcriptional regulator
ABB96_RS05320	COG1454	alcohol dehydrogenase
ABB96_RS05340	COG2011	ABC-type metal ion transport system permease component
ABB96_RS05345	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABB96_RS05350	COG1501	Belongs to the glycosyl hydrolase 31 family
ABB96_RS05375	COG0318	PFAM AMP-dependent synthetase and ligase
ABB96_RS05380	COG1473	amidohydrolase
ABB96_RS05390	COG2855	membrane
ABB96_RS05400	COG2239	Acts as a magnesium transporter
ABB96_RS05420	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS05430	COG1722	exodeoxyribonuclease VII activity
ABB96_RS05435	COG0142	geranyltranstransferase activity
ABB96_RS05440	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABB96_RS05445	COG1469	GTP cyclohydrolase I activity
ABB96_RS05450	COG0360	Binds together with S18 to 16S ribosomal RNA
ABB96_RS05455	COG2965	DNA replication, synthesis of RNA primer
ABB96_RS05460	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABB96_RS05465	COG0359	binds to the 23S rRNA
ABB96_RS05475	COG0305	Participates in initiation and elongation during chromosome replication
ABB96_RS05485	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABB96_RS05490	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ABB96_RS05495	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABB96_RS05500	COG3737	Protein of unknown function (DUF498/DUF598)
ABB96_RS05505	COG0436	Aminotransferase
ABB96_RS05530	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ABB96_RS05560	COG0268	Binds directly to 16S ribosomal RNA
ABB96_RS05570	COG0728	peptidoglycan biosynthetic process
ABB96_RS05580	COG0563	adenylate kinase activity
ABB96_RS05585	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ABB96_RS05590	COG2835	tetraacyldisaccharide 4'-kinase activity
ABB96_RS05595	COG1663	tetraacyldisaccharide 4'-kinase activity
ABB96_RS05600	COG0848	biopolymer transport protein
ABB96_RS05605	COG0811	peptide transport
ABB96_RS05615	COG1570	exodeoxyribonuclease VII activity
ABB96_RS05620	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABB96_RS05625	COG0038	chloride channel
ABB96_RS05630	COG0183	Belongs to the thiolase family
ABB96_RS05640	COG1278	Cold shock
ABB96_RS05645	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABB96_RS05655	COG4953	penicillin-binding protein 1C
ABB96_RS05660	COG0542	response to heat
ABB96_RS05665	COG2995	paraquat-inducible protein a
ABB96_RS05670	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABB96_RS05670	COG3008	intermembrane lipid transfer
ABB96_RS05680	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABB96_RS05680	COG0506	proline dehydrogenase activity
ABB96_RS05680	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABB96_RS05715	COG2271	Major facilitator Superfamily
ABB96_RS05720	COG1309	transcriptional regulator
ABB96_RS05730	COG3468	outer membrane autotransporter barrel domain protein
ABB96_RS05760	COG0477	Major facilitator Superfamily
ABB96_RS05770	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABB96_RS05775	COG1845	cytochrome c oxidase, subunit III
ABB96_RS05780	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABB96_RS05790	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS05805	COG0789	Transcriptional regulator
ABB96_RS05830	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ABB96_RS05835	COG0697	spore germination
ABB96_RS05845	COG0678	peroxiredoxin activity
ABB96_RS05855	COG0412	Dienelactone hydrolase
ABB96_RS05865	COG0315	cyclic pyranopterin monophosphate synthase activity
ABB96_RS05880	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABB96_RS05885	COG0303	'Molybdopterin
ABB96_RS05890	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABB96_RS05910	COG0165	Argininosuccinate lyase
ABB96_RS05915	COG0668	transmembrane transport
ABB96_RS05960	COG0747	negative chemotaxis
ABB96_RS05965	COG0601	transmembrane transport
ABB96_RS05970	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS05975	COG1162	GTPase activity
ABB96_RS05980	COG0501	Belongs to the peptidase M48B family
ABB96_RS05985	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABB96_RS05995	COG3327	negative regulation of DNA-templated transcription, initiation
ABB96_RS06000	COG3396	Phenylacetate-CoA oxygenase
ABB96_RS06005	COG3460	Phenylacetate-CoA oxygenase
ABB96_RS06010	COG3396	Phenylacetate-CoA oxygenase
ABB96_RS06015	COG2151	metal-sulfur cluster biosynthetic enzyme
ABB96_RS06020	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABB96_RS06030	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS06035	COG1024	Enoyl-CoA hydratase
ABB96_RS06040	COG2050	protein possibly involved in aromatic compounds catabolism
ABB96_RS06050	COG3539	Fimbrial protein
ABB96_RS06070	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB96_RS06075	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABB96_RS06075	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB96_RS06080	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB96_RS06085	COG0047	phosphoribosylformylglycinamidine synthase activity
ABB96_RS06085	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABB96_RS06115	COG0235	Class ii aldolase
ABB96_RS06120	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB96_RS06125	COG0720	synthase
ABB96_RS06130	COG0602	queuosine metabolic process
ABB96_RS06155	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABB96_RS06190	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS06220	COG3842	ATPase activity
ABB96_RS06230	COG0395	ABC-type sugar transport system, permease component
ABB96_RS06260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS06265	COG0420	3'-5' exonuclease activity
ABB96_RS06310	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABB96_RS06310	COG0519	Catalyzes the synthesis of GMP from XMP
ABB96_RS06325	COG3550	peptidyl-serine autophosphorylation
ABB96_RS06335	COG0477	Major facilitator Superfamily
ABB96_RS06350	COG1228	amidohydrolase
ABB96_RS06360	COG1116	anion transmembrane transporter activity
ABB96_RS06365	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS06405	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ABB96_RS06425	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ABB96_RS06455	COG2814	Major facilitator Superfamily
ABB96_RS06470	COG1280	lysine exporter protein (LysE YggA)
ABB96_RS06485	COG0747	negative chemotaxis
ABB96_RS06490	COG0601	transmembrane transport
ABB96_RS06495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS06500	COG4172	Belongs to the ABC transporter superfamily
ABB96_RS06505	COG1609	Transcriptional regulator
ABB96_RS06535	COG0586	Pfam SNARE associated Golgi protein
ABB96_RS06550	COG0500	methyltransferase
ABB96_RS06565	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB96_RS06575	COG0756	dUTP diphosphatase activity
ABB96_RS06590	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABB96_RS06595	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABB96_RS06600	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABB96_RS06605	COG0072	phenylalanine-tRNA ligase activity
ABB96_RS06605	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABB96_RS06610	COG0776	regulation of translation
ABB96_RS06680	COG0540	Belongs to the ATCase OTCase family
ABB96_RS06685	COG2974	May be involved in recombination
ABB96_RS06695	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS06700	COG0583	DNA-binding transcription factor activity
ABB96_RS06720	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS06735	COG3842	ATPase activity
ABB96_RS06740	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB96_RS06740	COG1024	Enoyl-CoA hydratase
ABB96_RS06760	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABB96_RS06765	COG2137	regulation of response to DNA damage stimulus
ABB96_RS06775	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ABB96_RS06785	COG0045	succinate-CoA ligase (ADP-forming) activity
ABB96_RS06790	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ABB96_RS06795	COG0861	Integral membrane protein TerC family
ABB96_RS06800	COG0861	Integral membrane protein TerC family
ABB96_RS06805	COG0181	hydroxymethylbilane synthase activity
ABB96_RS06865	COG4964	Belongs to the GSP D family
ABB96_RS06895	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABB96_RS06905	COG0583	DNA-binding transcription factor activity
ABB96_RS06915	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS06920	COG4311	Sarcosine oxidase, delta subunit
ABB96_RS06925	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ABB96_RS06925	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABB96_RS06960	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ABB96_RS06965	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ABB96_RS06970	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABB96_RS06975	COG0735	belongs to the Fur family
ABB96_RS06980	COG0497	DNA recombination
ABB96_RS06985	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABB96_RS06990	COG1420	regulation of RNA biosynthetic process
ABB96_RS06995	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ABB96_RS07005	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABB96_RS07015	COG0443	Heat shock 70 kDa protein
ABB96_RS07025	COG0612	Peptidase, M16
ABB96_RS07045	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABB96_RS07090	COG0745	RESPONSE REGULATOR receiver
ABB96_RS07095	COG2205	protein histidine kinase activity
ABB96_RS07100	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
ABB96_RS07105	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABB96_RS07110	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABB96_RS07125	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABB96_RS07140	COG1193	negative regulation of DNA recombination
ABB96_RS07145	COG0492	ferredoxin-NADP+ reductase activity
ABB96_RS07150	COG1674	ftsk spoiiie
ABB96_RS07155	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABB96_RS07160	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABB96_RS07165	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABB96_RS07190	COG3706	GGDEF domain
ABB96_RS07210	COG2814	Major facilitator Superfamily
ABB96_RS07240	COG3486	L-lysine 6-monooxygenase (NADPH) activity
ABB96_RS07255	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS07265	COG3022	response to hydroperoxide
ABB96_RS07275	COG1289	transmembrane transporter activity
ABB96_RS07295	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABB96_RS07305	COG2197	response regulator
ABB96_RS07310	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABB96_RS07315	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ABB96_RS07320	COG0189	ligase activity
ABB96_RS07330	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABB96_RS07335	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABB96_RS07345	COG1764	response to oxidative stress
ABB96_RS07350	COG2423	ornithine cyclodeaminase activity
ABB96_RS07360	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS07365	COG0765	amino acid transport
ABB96_RS07370	COG0765	amino acid transport
ABB96_RS07375	COG1126	abc transporter atp-binding protein
ABB96_RS07430	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ABB96_RS07440	COG2944	sequence-specific DNA binding
ABB96_RS07450	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ABB96_RS07455	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ABB96_RS07460	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABB96_RS07465	COG0009	L-threonylcarbamoyladenylate synthase
ABB96_RS07470	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS07475	COG1414	Transcriptional regulator
ABB96_RS07490	COG0765	amino acid transport
ABB96_RS07495	COG1126	abc transporter atp-binding protein
ABB96_RS07500	COG0028	Belongs to the TPP enzyme family
ABB96_RS07515	COG0028	Belongs to the TPP enzyme family
ABB96_RS07520	COG0583	DNA-binding transcription factor activity
ABB96_RS07525	COG4974	Belongs to the 'phage' integrase family
ABB96_RS07530	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABB96_RS07535	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
ABB96_RS07550	COG1686	Belongs to the peptidase S11 family
ABB96_RS07560	COG2814	Major facilitator Superfamily
ABB96_RS07570	COG1074	ATP-dependent DNA helicase activity
ABB96_RS07585	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABB96_RS07590	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ABB96_RS07595	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABB96_RS07615	COG2321	neutral zinc metallopeptidase
ABB96_RS07620	COG0009	L-threonylcarbamoyladenylate synthase
ABB96_RS07665	COG3360	Dodecin
ABB96_RS07670	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABB96_RS07675	COG2850	peptidyl-arginine hydroxylation
ABB96_RS07685	COG3539	Fimbrial protein
ABB96_RS07690	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
ABB96_RS07695	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABB96_RS07715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS07720	COG0765	amino acid transport
ABB96_RS07725	COG1126	abc transporter atp-binding protein
ABB96_RS07730	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABB96_RS07735	COG1758	RNA polymerase activity
ABB96_RS07740	COG0194	GDP metabolic process
ABB96_RS07745	COG3258	Cytochrome c
ABB96_RS07750	COG2863	cytochrome
ABB96_RS07755	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS07760	COG0791	NLP P60 protein
ABB96_RS07765	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABB96_RS07785	COG1561	YicC-like family, N-terminal region
ABB96_RS07790	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ABB96_RS07805	COG0840	transmembrane signaling receptor activity
ABB96_RS07810	COG2200	EAL domain
ABB96_RS07810	COG2199	diguanylate cyclase activity
ABB96_RS07815	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABB96_RS07825	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABB96_RS07830	COG0174	glutamine synthetase
ABB96_RS07840	COG2204	response regulator
ABB96_RS07845	COG0583	DNA-binding transcription factor activity
ABB96_RS07850	COG1741	Belongs to the pirin family
ABB96_RS07855	COG1741	Belongs to the pirin family
ABB96_RS07865	COG3842	ATPase activity
ABB96_RS07870	COG1178	ABC-type Fe3 transport system permease component
ABB96_RS07875	COG1840	ABC-type Fe3 transport system, periplasmic component
ABB96_RS07885	COG0583	DNA-binding transcription factor activity
ABB96_RS07895	COG0656	L-ascorbic acid biosynthetic process
ABB96_RS07910	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABB96_RS07915	COG0583	DNA-binding transcription factor activity
ABB96_RS07930	COG0783	Belongs to the Dps family
ABB96_RS07950	COG0463	Glycosyl transferase, family 2
ABB96_RS07970	COG0438	transferase activity, transferring glycosyl groups
ABB96_RS07985	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABB96_RS08010	COG0300	oxidoreductase activity
ABB96_RS08055	COG0861	Integral membrane protein TerC family
ABB96_RS08060	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS08080	COG0714	Associated with various cellular activities
ABB96_RS08115	COG3119	arylsulfatase activity
ABB96_RS08140	COG2197	response regulator
ABB96_RS08150	COG2944	sequence-specific DNA binding
ABB96_RS08155	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
ABB96_RS08160	COG0625	glutathione transferase activity
ABB96_RS08190	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABB96_RS08195	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS08220	COG3119	arylsulfatase activity
ABB96_RS08240	COG0431	NADPH-dependent FMN reductase
ABB96_RS08270	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS08275	COG0583	DNA-binding transcription factor activity
ABB96_RS08290	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS08295	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABB96_RS08295	COG2111	Na H antiporter
ABB96_RS08300	COG1006	Multisubunit Na H antiporter MnhC subunit
ABB96_RS08305	COG0651	ATP synthesis coupled electron transport
ABB96_RS08310	COG1863	multisubunit Na H antiporter MnhE subunit
ABB96_RS08315	COG2212	antiporter activity
ABB96_RS08340	COG0590	tRNA wobble adenosine to inosine editing
ABB96_RS08345	COG1619	proteins homologs of microcin C7 resistance protein MccF
ABB96_RS08350	COG1024	Enoyl-CoA hydratase
ABB96_RS08365	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB96_RS08370	COG0488	(ABC) transporter
ABB96_RS08405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABB96_RS08405	COG1017	nitric oxide dioxygenase activity
ABB96_RS08410	COG1959	2 iron, 2 sulfur cluster binding
ABB96_RS08415	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS08435	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABB96_RS08440	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABB96_RS08445	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABB96_RS08450	COG0084	hydrolase, TatD family'
ABB96_RS08465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS08475	COG1126	abc transporter atp-binding protein
ABB96_RS08480	COG0010	Belongs to the arginase family
ABB96_RS08485	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABB96_RS08490	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS08500	COG0028	Belongs to the TPP enzyme family
ABB96_RS08510	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABB96_RS08510	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB96_RS08520	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB96_RS08540	COG3189	MarR family transcriptional regulator
ABB96_RS08545	COG2010	Cytochrome c
ABB96_RS08570	COG4336	lyase activity
ABB96_RS08580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS08580	COG2205	protein histidine kinase activity
ABB96_RS08585	COG2197	response regulator
ABB96_RS08590	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
ABB96_RS08590	COG3064	Membrane
ABB96_RS08590	COG3210	domain, Protein
ABB96_RS08605	COG3121	Chaperone
ABB96_RS08610	COG3188	usher protein
ABB96_RS08615	COG3539	Fimbrial protein
ABB96_RS08620	COG2831	hemolysin activation secretion protein
ABB96_RS08635	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB96_RS08660	COG0583	DNA-binding transcription factor activity
ABB96_RS08685	COG0668	transmembrane transport
ABB96_RS08705	COG0483	inositol monophosphate 1-phosphatase activity
ABB96_RS08710	COG1253	flavin adenine dinucleotide binding
ABB96_RS08715	COG1968	undecaprenyl-diphosphatase activity
ABB96_RS08720	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABB96_RS08735	COG0215	cysteine-tRNA ligase activity
ABB96_RS08745	COG0825	malonyl-CoA metabolic process
ABB96_RS08755	COG0037	tRNA processing
ABB96_RS08760	COG0527	aspartate kinase activity
ABB96_RS08785	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB96_RS08790	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB96_RS08790	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABB96_RS08805	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABB96_RS08810	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
ABB96_RS08815	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS08825	COG0583	DNA-binding transcription factor activity
ABB96_RS08855	COG3842	ATPase activity
ABB96_RS08865	COG1902	pentaerythritol trinitrate reductase activity
ABB96_RS08865	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABB96_RS08870	COG1414	Transcriptional regulator
ABB96_RS08875	COG1832	CoA-binding protein
ABB96_RS08885	COG0251	oxidation-reduction process
ABB96_RS08910	COG1902	pentaerythritol trinitrate reductase activity
ABB96_RS08920	COG1215	transferase activity, transferring glycosyl groups
ABB96_RS08925	COG1649	PFAM Uncharacterised BCR, COG1649
ABB96_RS08925	COG0726	polysaccharide deacetylase
ABB96_RS08945	COG1846	Transcriptional regulator
ABB96_RS08950	COG2197	response regulator
ABB96_RS08970	COG1045	serine acetyltransferase
ABB96_RS08980	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABB96_RS08985	COG0483	inositol monophosphate 1-phosphatase activity
ABB96_RS08990	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS08995	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABB96_RS09010	COG0210	DNA helicase
ABB96_RS09015	COG0598	Magnesium transport protein CorA
ABB96_RS09025	COG0747	negative chemotaxis
ABB96_RS09030	COG0601	transmembrane transport
ABB96_RS09035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS09040	COG4172	Belongs to the ABC transporter superfamily
ABB96_RS09045	COG1846	Transcriptional regulator
ABB96_RS09095	COG4964	Belongs to the GSP D family
ABB96_RS09135	COG2204	response regulator
ABB96_RS09150	COG1595	DNA-templated transcription, initiation
ABB96_RS09160	COG3474	cytochrome
ABB96_RS09165	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABB96_RS09180	COG3384	dioxygenase
ABB96_RS09185	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABB96_RS09210	COG2885	chlorophyll binding
ABB96_RS09245	COG0697	spore germination
ABB96_RS09250	COG0730	response to heat
ABB96_RS09270	COG0583	DNA-binding transcription factor activity
ABB96_RS09275	COG0427	acetyl-CoA hydrolase
ABB96_RS09330	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABB96_RS09335	COG0154	amidase activity
ABB96_RS09345	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ABB96_RS09360	COG0495	leucyl-tRNA aminoacylation
ABB96_RS09365	COG2814	Major facilitator Superfamily
ABB96_RS09395	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABB96_RS09400	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABB96_RS09405	COG2814	Major facilitator Superfamily
ABB96_RS09410	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABB96_RS09425	COG4176	ABC-type proline glycine betaine transport system permease component
ABB96_RS09435	COG1942	4-Oxalocrotonate Tautomerase
ABB96_RS09440	COG0183	Belongs to the thiolase family
ABB96_RS09450	COG1802	Transcriptional regulator
ABB96_RS09460	COG1024	Enoyl-CoA hydratase
ABB96_RS09465	COG0318	PFAM AMP-dependent synthetase and ligase
ABB96_RS09470	COG0318	PFAM AMP-dependent synthetase and ligase
ABB96_RS09480	COG2032	superoxide dismutase activity
ABB96_RS09495	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ABB96_RS09520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABB96_RS09525	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABB96_RS09535	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABB96_RS09540	COG0736	holo-[acyl-carrier-protein] synthase activity
ABB96_RS09545	COG1472	Belongs to the glycosyl hydrolase 3 family
ABB96_RS09550	COG0322	excinuclease ABC activity
ABB96_RS09555	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABB96_RS09570	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABB96_RS09570	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABB96_RS09575	COG2224	Isocitrate lyase
ABB96_RS09595	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABB96_RS09605	COG4638	Rieske (2fe-2S)
ABB96_RS09615	COG1024	Enoyl-CoA hydratase
ABB96_RS09625	COG0633	Ferredoxin
ABB96_RS09630	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS09645	COG0183	Belongs to the thiolase family
ABB96_RS09690	COG2346	COG2346, Truncated hemoglobins
ABB96_RS09820	COG2207	Transcriptional regulator
ABB96_RS09870	COG1132	(ABC) transporter
ABB96_RS09895	COG0659	secondary active sulfate transmembrane transporter activity
ABB96_RS09925	COG2169	Transcriptional regulator
ABB96_RS09930	COG5507	3-demethylubiquinone-9 3-methyltransferase
ABB96_RS09935	COG0384	phenazine biosynthesis protein PhzF
ABB96_RS09940	COG0583	DNA-binding transcription factor activity
ABB96_RS09945	COG2733	membrane
ABB96_RS09960	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS09965	COG3284	Transcriptional regulator
ABB96_RS09985	COG1380	Effector of murein hydrolase LrgA
ABB96_RS09990	COG4106	trans-aconitate 2-methyltransferase activity
ABB96_RS09990	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ABB96_RS10000	COG0156	8-amino-7-oxononanoate synthase activity
ABB96_RS10070	COG1131	(ABC) transporter
ABB96_RS10075	COG0842	Transport permease protein
ABB96_RS10080	COG0628	permease
ABB96_RS10115	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABB96_RS10125	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABB96_RS10130	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ABB96_RS10135	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABB96_RS10140	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ABB96_RS10145	COG0330	HflC and HflK could
ABB96_RS10150	COG0330	HflC and HflK could
ABB96_RS10155	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABB96_RS10160	COG1923	regulation of RNA biosynthetic process
ABB96_RS10165	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABB96_RS10170	COG1160	GTP binding
ABB96_RS10175	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABB96_RS10180	COG2976	Protein conserved in bacteria
ABB96_RS10185	COG0124	histidyl-tRNA synthetase
ABB96_RS10190	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ABB96_RS10200	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABB96_RS10205	COG0105	UTP biosynthetic process
ABB96_RS10210	COG0525	valine-tRNA ligase activity
ABB96_RS10225	COG0642	Histidine kinase
ABB96_RS10245	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABB96_RS10250	COG0336	Belongs to the RNA methyltransferase TrmD family
ABB96_RS10255	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABB96_RS10260	COG0228	four-way junction DNA binding
ABB96_RS10270	COG0425	Belongs to the sulfur carrier protein TusA family
ABB96_RS10275	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABB96_RS10320	COG0154	amidase activity
ABB96_RS10325	COG4172	Belongs to the ABC transporter superfamily
ABB96_RS10330	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS10335	COG0601	transmembrane transport
ABB96_RS10340	COG0747	negative chemotaxis
ABB96_RS10370	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS10380	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ABB96_RS10395	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABB96_RS10400	COG3395	kinase activity
ABB96_RS10415	COG1024	Enoyl-CoA hydratase
ABB96_RS10435	COG0633	Ferredoxin
ABB96_RS10440	COG0443	Heat shock 70 kDa protein
ABB96_RS10445	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ABB96_RS10450	COG0316	Belongs to the HesB IscA family
ABB96_RS10455	COG0822	iron-sulfur transferase activity
ABB96_RS10460	COG1104	cysteine desulfurase activity
ABB96_RS10470	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABB96_RS10475	COG0556	nucleotide-excision repair
ABB96_RS10485	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABB96_RS10490	COG3468	outer membrane autotransporter barrel domain protein
ABB96_RS10520	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABB96_RS10535	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS10540	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS10545	COG0183	Belongs to the thiolase family
ABB96_RS10555	COG1024	Enoyl-CoA hydratase
ABB96_RS10570	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS10575	COG0583	DNA-binding transcription factor activity
ABB96_RS10580	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABB96_RS10585	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABB96_RS10590	COG0740	serine-type endopeptidase activity
ABB96_RS10595	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABB96_RS10615	COG1278	Cold shock
ABB96_RS10650	COG2171	N-acyltransferase activity
ABB96_RS10655	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABB96_RS10660	COG2890	protein-(glutamine-N5) methyltransferase activity
ABB96_RS10665	COG0488	(ABC) transporter
ABB96_RS10670	COG4771	TonB-dependent receptor
ABB96_RS10675	COG0210	DNA helicase
ABB96_RS10695	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABB96_RS10700	COG0196	riboflavin kinase activity
ABB96_RS10705	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABB96_RS10710	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ABB96_RS10715	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABB96_RS10725	COG1522	sequence-specific DNA binding
ABB96_RS10745	COG2951	lytic endotransglycosylase activity
ABB96_RS10750	COG2833	Protein of unknown function (DUF455)
ABB96_RS10770	COG0189	ligase activity
ABB96_RS10770	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABB96_RS10775	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABB96_RS10775	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABB96_RS10780	COG3237	CsbD-like
ABB96_RS10790	COG2823	Periplasmic or secreted lipoprotein
ABB96_RS10805	COG4181	ATPase activity
ABB96_RS10815	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABB96_RS10820	COG0584	glycerophosphoryl diester phosphodiesterase
ABB96_RS10825	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABB96_RS10835	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABB96_RS10835	COG0678	peroxiredoxin activity
ABB96_RS10845	COG0789	Transcriptional regulator
ABB96_RS10850	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABB96_RS10880	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABB96_RS10885	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ABB96_RS10895	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ABB96_RS10900	COG2252	PERMEase
ABB96_RS10910	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABB96_RS10940	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABB96_RS10945	COG2358	TRAP transporter, solute receptor (TAXI family
ABB96_RS10975	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB96_RS10980	COG1366	Belongs to the anti-sigma-factor antagonist family
ABB96_RS10985	COG2172	sigma factor antagonist activity
ABB96_RS10990	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABB96_RS11000	COG2208	phosphoserine phosphatase activity
ABB96_RS11000	COG2770	Histidine kinase
ABB96_RS11025	COG1595	DNA-templated transcription, initiation
ABB96_RS11040	COG4792	protein secretion
ABB96_RS11045	COG4791	protein targeting
ABB96_RS11050	COG4794	Type iii secretion
ABB96_RS11055	COG4790	Type iii secretion
ABB96_RS11090	COG4669	(LipO)protein
ABB96_RS11155	COG4789	Type iii secretion
ABB96_RS11185	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABB96_RS11190	COG0840	transmembrane signaling receptor activity
ABB96_RS11195	COG2233	PERMEase
ABB96_RS11215	COG0492	ferredoxin-NADP+ reductase activity
ABB96_RS11220	COG1840	ABC-type Fe3 transport system, periplasmic component
ABB96_RS11225	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABB96_RS11230	COG1178	ABC-type Fe3 transport system permease component
ABB96_RS11235	COG3842	ATPase activity
ABB96_RS11240	COG0583	DNA-binding transcription factor activity
ABB96_RS11260	COG0501	Belongs to the peptidase M48B family
ABB96_RS11270	COG0697	spore germination
ABB96_RS11280	COG1846	Transcriptional regulator
ABB96_RS11290	COG1566	PFAM secretion protein HlyD family protein
ABB96_RS11295	COG2814	Major facilitator Superfamily
ABB96_RS11300	COG0473	3-isopropylmalate dehydrogenase activity
ABB96_RS11310	COG0747	negative chemotaxis
ABB96_RS11320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS11335	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABB96_RS11360	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS11370	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABB96_RS11375	COG1115	amino acid carrier protein
ABB96_RS11380	COG0433	COG0433 Predicted ATPase
ABB96_RS11385	COG0217	transcriptional regulatory protein
ABB96_RS11390	COG0151	Belongs to the GarS family
ABB96_RS11395	COG0408	coproporphyrinogen oxidase activity
ABB96_RS11400	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ABB96_RS11405	COG0799	negative regulation of ribosome biogenesis
ABB96_RS11410	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ABB96_RS11415	COG0424	maF-like protein
ABB96_RS11420	COG3468	outer membrane autotransporter barrel domain protein
ABB96_RS11460	COG1530	ribonuclease E activity
ABB96_RS11465	COG0077	Prephenate dehydratase
ABB96_RS11480	COG1132	(ABC) transporter
ABB96_RS11485	COG0859	PFAM glycosyl transferase family 9
ABB96_RS11510	COG2194	sulfuric ester hydrolase activity
ABB96_RS11515	COG0438	transferase activity, transferring glycosyl groups
ABB96_RS11520	COG0463	Glycosyl transferase, family 2
ABB96_RS11525	COG0726	polysaccharide deacetylase
ABB96_RS11530	COG0438	transferase activity, transferring glycosyl groups
ABB96_RS11545	COG1643	Atp-dependent helicase
ABB96_RS11550	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABB96_RS11550	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ABB96_RS11555	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
ABB96_RS11565	COG0704	Plays a role in the regulation of phosphate uptake
ABB96_RS11570	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ABB96_RS11575	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS11600	COG1177	transmembrane transport
ABB96_RS11605	COG1176	ABC-type spermidine putrescine transport system, permease component I
ABB96_RS11610	COG3842	ATPase activity
ABB96_RS11615	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ABB96_RS11630	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABB96_RS11635	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABB96_RS11645	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABB96_RS11645	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABB96_RS11665	COG0372	Belongs to the citrate synthase family
ABB96_RS11670	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABB96_RS11675	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABB96_RS11680	COG1053	succinate dehydrogenase
ABB96_RS11685	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABB96_RS11690	COG2009	succinate dehydrogenase
ABB96_RS11695	COG2188	Transcriptional regulator
ABB96_RS11700	COG0039	L-malate dehydrogenase activity
ABB96_RS11730	COG1981	membrane
ABB96_RS11755	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB96_RS11765	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABB96_RS11795	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABB96_RS11800	COG0148	phosphopyruvate hydratase activity
ABB96_RS11810	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ABB96_RS11815	COG0504	CTP synthase activity
ABB96_RS11840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS11850	COG0747	negative chemotaxis
ABB96_RS11855	COG4172	Belongs to the ABC transporter superfamily
ABB96_RS11860	COG1446	asparaginase
ABB96_RS11890	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABB96_RS11905	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
ABB96_RS11910	COG0697	spore germination
ABB96_RS11915	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB96_RS11925	COG3193	protein, possibly involved in utilization of glycolate and propanediol
ABB96_RS11930	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB96_RS11935	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABB96_RS11940	COG0791	NLP P60 protein
ABB96_RS11955	COG0583	DNA-binding transcription factor activity
ABB96_RS11970	COG0583	DNA-binding transcription factor activity
ABB96_RS11980	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ABB96_RS11995	COG0670	Belongs to the BI1 family
ABB96_RS12000	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS12010	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABB96_RS12020	COG1381	Involved in DNA repair and RecF pathway recombination
ABB96_RS12025	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABB96_RS12030	COG0571	ribonuclease III activity
ABB96_RS12035	COG0681	Belongs to the peptidase S26 family
ABB96_RS12040	COG0481	GTPase activity
ABB96_RS12045	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABB96_RS12070	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABB96_RS12075	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABB96_RS12090	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABB96_RS12095	COG0416	fatty acid biosynthetic process
ABB96_RS12100	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ABB96_RS12105	COG1399	metal-binding, possibly nucleic acid-binding protein
ABB96_RS12110	COG0424	maF-like protein
ABB96_RS12120	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABB96_RS12125	COG1289	transmembrane transporter activity
ABB96_RS12135	COG3022	response to hydroperoxide
ABB96_RS12150	COG0135	phosphoribosylanthranilate isomerase activity
ABB96_RS12165	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB96_RS12170	COG0101	tRNA pseudouridine synthase activity
ABB96_RS12180	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ABB96_RS12185	COG0473	3-isopropylmalate dehydrogenase activity
ABB96_RS12190	COG0066	3-isopropylmalate dehydratase activity
ABB96_RS12195	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABB96_RS12205	COG1122	ATPase activity
ABB96_RS12235	COG0437	4 iron, 4 sulfur cluster binding
ABB96_RS12240	COG3383	formate dehydrogenase (NAD+) activity
ABB96_RS12240	COG0243	molybdopterin cofactor binding
ABB96_RS12270	COG0489	protein tyrosine kinase activity
ABB96_RS12275	COG0746	molybdenum cofactor guanylyltransferase activity
ABB96_RS12280	COG0303	'Molybdopterin
ABB96_RS12285	COG1763	Mo-molybdopterin cofactor biosynthetic process
ABB96_RS12295	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ABB96_RS12300	COG5001	Diguanylate cyclase
ABB96_RS12320	COG3842	ATPase activity
ABB96_RS12330	COG0406	alpha-ribazole phosphatase activity
ABB96_RS12340	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ABB96_RS12345	COG0505	Belongs to the CarA family
ABB96_RS12350	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABB96_RS12380	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ABB96_RS12385	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS12395	COG2867	negative regulation of translational initiation
ABB96_RS12405	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABB96_RS12410	COG3706	GGDEF domain
ABB96_RS12415	COG0330	HflC and HflK could
ABB96_RS12430	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABB96_RS12430	COG0519	Catalyzes the synthesis of GMP from XMP
ABB96_RS12440	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
ABB96_RS12445	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABB96_RS12450	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABB96_RS12455	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABB96_RS12465	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABB96_RS12470	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABB96_RS12475	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
ABB96_RS12480	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABB96_RS12485	COG0750	zinc metalloprotease
ABB96_RS12490	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABB96_RS12500	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABB96_RS12505	COG0233	cytoplasmic translational termination
ABB96_RS12510	COG0528	UMP kinase activity
ABB96_RS12515	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABB96_RS12520	COG0052	Belongs to the universal ribosomal protein uS2 family
ABB96_RS12525	COG0024	Methionine aminopeptidase
ABB96_RS12530	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
ABB96_RS12560	COG0285	dihydrofolate synthase activity
ABB96_RS12595	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABB96_RS12605	COG1677	Flagellar hook-basal body complex protein FliE
ABB96_RS12615	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABB96_RS12625	COG1157	protein secretion by the type III secretion system
ABB96_RS12650	COG1580	Controls the rotational direction of flagella during chemotaxis
ABB96_RS12670	COG1338	Plays a role in the flagellum-specific transport system
ABB96_RS12690	COG0840	transmembrane signaling receptor activity
ABB96_RS12695	COG0840	transmembrane signaling receptor activity
ABB96_RS12700	COG0840	transmembrane signaling receptor activity
ABB96_RS12710	COG1256	bacterial-type flagellum assembly
ABB96_RS12720	COG1706	bacterial-type flagellum-dependent cell motility
ABB96_RS12725	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
ABB96_RS12740	COG1749	Flagellar hook protein flgE
ABB96_RS12750	COG1558	bacterial-type flagellum-dependent cell motility
ABB96_RS12755	COG1815	bacterial-type flagellum-dependent cell motility
ABB96_RS12795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS12800	COG0765	amino acid transport
ABB96_RS12805	COG1126	abc transporter atp-binding protein
ABB96_RS12820	COG4948	Mandelate Racemase Muconate Lactonizing
ABB96_RS12825	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS12835	COG0066	3-isopropylmalate dehydratase activity
ABB96_RS12850	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS12860	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS12870	COG1802	Transcriptional regulator
ABB96_RS12885	COG0583	DNA-binding transcription factor activity
ABB96_RS12905	COG1695	Transcriptional regulator
ABB96_RS12915	COG3568	Endonuclease Exonuclease Phosphatase
ABB96_RS12920	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB96_RS12935	COG0392	lysyltransferase activity
ABB96_RS12975	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ABB96_RS12985	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ABB96_RS13005	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ABB96_RS13035	COG0667	Aldo Keto reductase
ABB96_RS13050	COG2259	Doxx family
ABB96_RS13080	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS13100	COG0386	Belongs to the glutathione peroxidase family
ABB96_RS13105	COG0625	glutathione transferase activity
ABB96_RS13130	COG0688	phosphatidylethanolamine metabolic process
ABB96_RS13140	COG1464	Belongs to the NlpA lipoprotein family
ABB96_RS13155	COG2363	Small membrane protein
ABB96_RS13180	COG3842	ATPase activity
ABB96_RS13185	COG0395	ABC-type sugar transport system, permease component
ABB96_RS13190	COG1175	transmembrane transport
ABB96_RS13195	COG1653	transport
ABB96_RS13205	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ABB96_RS13220	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABB96_RS13240	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABB96_RS13255	COG0697	spore germination
ABB96_RS13265	COG2311	Membrane
ABB96_RS13290	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ABB96_RS13300	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABB96_RS13305	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABB96_RS13310	COG1760	l-serine dehydratase
ABB96_RS13315	COG1283	sodium-dependent phosphate transmembrane transporter activity
ABB96_RS13320	COG0412	Dienelactone hydrolase
ABB96_RS13335	COG1611	Belongs to the LOG family
ABB96_RS13355	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABB96_RS13360	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABB96_RS13365	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABB96_RS13370	COG0195	Participates in both transcription termination and antitermination
ABB96_RS13370	COG2251	uridine kinase activity
ABB96_RS13375	COG0779	Required for maturation of 30S ribosomal subunits
ABB96_RS13380	COG1187	pseudouridine synthase activity
ABB96_RS13385	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABB96_RS13395	COG0583	DNA-binding transcription factor activity
ABB96_RS13405	COG0523	cobalamin synthesis protein
ABB96_RS13425	COG0625	glutathione transferase activity
ABB96_RS13430	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABB96_RS13435	COG1047	Peptidyl-prolyl cis-trans
ABB96_RS13440	COG2003	Belongs to the UPF0758 family
ABB96_RS13445	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
ABB96_RS13450	COG3483	tryptophan 2,3-dioxygenase activity
ABB96_RS13455	COG0254	rRNA binding
ABB96_RS13465	COG0534	Mate efflux family protein
ABB96_RS13485	COG2304	oxidoreductase activity
ABB96_RS13505	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS13510	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABB96_RS13515	COG1562	ergosterol biosynthetic process
ABB96_RS13520	COG1562	ergosterol biosynthetic process
ABB96_RS13525	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
ABB96_RS13525	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
ABB96_RS13530	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABB96_RS13540	COG0842	Transport permease protein
ABB96_RS13545	COG1131	(ABC) transporter
ABB96_RS13565	COG1477	protein flavinylation
ABB96_RS13580	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
ABB96_RS13595	COG5564	TIM-barrel signal transduction protein
ABB96_RS13600	COG5441	Belongs to the UPF0261 family
ABB96_RS13610	COG3468	outer membrane autotransporter barrel domain protein
ABB96_RS13615	COG3468	outer membrane autotransporter barrel domain protein
ABB96_RS13630	COG0542	response to heat
ABB96_RS13635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABB96_RS13650	COG0494	nUDIX hydrolase
ABB96_RS13655	COG3530	Putative quorum-sensing-regulated virulence factor
ABB96_RS13665	COG1595	DNA-templated transcription, initiation
ABB96_RS13670	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABB96_RS13705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS13710	COG0765	amino acid transport
ABB96_RS13715	COG0765	amino acid transport
ABB96_RS13745	COG2988	succinylglutamate desuccinylase activity
ABB96_RS13770	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS13775	COG2084	Dehydrogenase
ABB96_RS13790	COG1619	proteins homologs of microcin C7 resistance protein MccF
ABB96_RS13805	COG2814	Major facilitator Superfamily
ABB96_RS13815	COG0583	DNA-binding transcription factor activity
ABB96_RS13855	COG0672	)-iron permease
ABB96_RS13870	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
ABB96_RS13875	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS13880	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABB96_RS13890	COG0564	pseudouridine synthase activity
ABB96_RS13900	COG1199	ATP-dependent helicase activity
ABB96_RS13905	COG2183	response to ionizing radiation
ABB96_RS13910	COG0180	Tryptophanyl-tRNA synthetase
ABB96_RS13935	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS13945	COG0583	DNA-binding transcription factor activity
ABB96_RS13950	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS13955	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABB96_RS13960	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABB96_RS13965	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABB96_RS13970	COG0567	Dehydrogenase, E1 component
ABB96_RS13980	COG1522	sequence-specific DNA binding
ABB96_RS13990	COG0280	phosphate acetyltransferase
ABB96_RS13990	COG0281	malic enzyme
ABB96_RS13995	COG3539	Fimbrial protein
ABB96_RS14010	COG0613	PHP domain protein
ABB96_RS14020	COG0658	competence protein
ABB96_RS14020	COG2333	competence protein COMEC
ABB96_RS14050	COG0084	hydrolase, TatD family'
ABB96_RS14055	COG1136	(ABC) transporter
ABB96_RS14070	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABB96_RS14080	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS14085	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ABB96_RS14100	COG1022	Amp-dependent synthetase and ligase
ABB96_RS14135	COG2205	protein histidine kinase activity
ABB96_RS14140	COG0745	RESPONSE REGULATOR receiver
ABB96_RS14145	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABB96_RS14155	COG1295	ribonuclease BN
ABB96_RS14170	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABB96_RS14200	COG1534	Rna-binding protein
ABB96_RS14205	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ABB96_RS14210	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABB96_RS14220	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABB96_RS14230	COG0248	Ppx GppA phosphatase
ABB96_RS14255	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABB96_RS14270	COG2732	(Barnase) inhibitor
ABB96_RS14280	COG0280	phosphate acetyltransferase
ABB96_RS14280	COG0281	malic enzyme
ABB96_RS14290	COG0436	Aminotransferase
ABB96_RS14295	COG0741	lytic transglycosylase activity
ABB96_RS14300	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ABB96_RS14325	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABB96_RS14325	COG1648	precorrin-2 dehydrogenase activity
ABB96_RS14330	COG3468	outer membrane autotransporter barrel domain protein
ABB96_RS14340	COG3468	outer membrane autotransporter barrel domain protein
ABB96_RS14350	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABB96_RS14355	COG2027	D-alanyl-D-alanine carboxypeptidase
ABB96_RS14360	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABB96_RS14365	COG0343	queuine tRNA-ribosyltransferase activity
ABB96_RS14370	COG1862	Preprotein translocase
ABB96_RS14375	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABB96_RS14380	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABB96_RS14395	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABB96_RS14400	COG1702	phosphate starvation-inducible protein PhoH
ABB96_RS14405	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ABB96_RS14410	COG4535	Mg2 and Co2 transporter CorC
ABB96_RS14420	COG0667	Aldo Keto reductase
ABB96_RS14445	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
ABB96_RS14450	COG0745	RESPONSE REGULATOR receiver
ABB96_RS14455	COG2201	protein-glutamate methylesterase activity
ABB96_RS14465	COG0840	transmembrane signaling receptor activity
ABB96_RS14480	COG0745	RESPONSE REGULATOR receiver
ABB96_RS14515	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABB96_RS14525	COG0739	heme binding
ABB96_RS14535	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABB96_RS14545	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABB96_RS14580	COG0625	glutathione transferase activity
ABB96_RS14595	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABB96_RS14600	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABB96_RS14605	COG0126	phosphoglycerate kinase activity
ABB96_RS14610	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABB96_RS14615	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABB96_RS14620	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABB96_RS14630	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABB96_RS14635	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABB96_RS14645	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ABB96_RS14655	COG4566	intracellular signal transduction
ABB96_RS14660	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABB96_RS14665	COG0339	signal peptide processing
ABB96_RS14670	COG1999	signal sequence binding
ABB96_RS14690	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABB96_RS14700	COG1187	pseudouridine synthase activity
ABB96_RS14705	COG3161	chorismate lyase activity
ABB96_RS14710	COG2814	Major facilitator Superfamily
ABB96_RS14720	COG0667	Aldo Keto reductase
ABB96_RS14735	COG0335	large ribosomal subunit rRNA binding
ABB96_RS14765	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABB96_RS14770	COG4208	sulfate ABC transporter
ABB96_RS14775	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABB96_RS14790	COG0450	alkyl hydroperoxide reductase
ABB96_RS14795	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS14810	COG0123	including yeast histone deacetylase and acetoin utilization protein
ABB96_RS14815	COG2951	lytic endotransglycosylase activity
ABB96_RS14830	COG1596	polysaccharide export
ABB96_RS14830	COG1555	photosystem II stabilization
ABB96_RS14835	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABB96_RS14840	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
ABB96_RS14845	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ABB96_RS14865	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ABB96_RS14870	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABB96_RS14875	COG0287	Prephenate dehydrogenase
ABB96_RS14885	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ABB96_RS14900	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ABB96_RS14910	COG2814	Major facilitator Superfamily
ABB96_RS14935	COG0583	DNA-binding transcription factor activity
ABB96_RS14975	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABB96_RS14990	COG0667	Aldo Keto reductase
ABB96_RS15000	COG5265	(ABC) transporter
ABB96_RS15045	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABB96_RS15050	COG0439	Biotin carboxylase
ABB96_RS15055	COG2188	Transcriptional regulator
ABB96_RS15080	COG0511	ligase activity, forming carbon-carbon bonds
ABB96_RS15095	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
ABB96_RS15115	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
ABB96_RS15135	COG0500	methyltransferase
ABB96_RS15140	COG5265	(ABC) transporter
ABB96_RS15155	COG0028	Belongs to the TPP enzyme family
ABB96_RS15160	COG0440	acetolactate synthase activity
ABB96_RS15165	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ABB96_RS15170	COG1183	phosphatidylcholine synthase activity
ABB96_RS15185	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ABB96_RS15190	COG1185	polyribonucleotide nucleotidyltransferase activity
ABB96_RS15205	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABB96_RS15225	COG0149	triose-phosphate isomerase activity
ABB96_RS15230	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABB96_RS15240	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABB96_RS15250	COG3799	methylaspartate ammonia-lyase activity
ABB96_RS15285	COG0583	DNA-binding transcription factor activity
ABB96_RS15290	COG0626	cystathionine gamma-synthase activity
ABB96_RS15295	COG3608	succinylglutamate desuccinylase aspartoacylase
ABB96_RS15315	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS15335	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
ABB96_RS15350	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABB96_RS15360	COG1733	regulation of RNA biosynthetic process
ABB96_RS15370	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABB96_RS15375	COG0583	DNA-binding transcription factor activity
ABB96_RS15380	COG1597	lipid kinase activity
ABB96_RS15390	COG0671	phosphoesterase, PA-phosphatase related
ABB96_RS15420	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB96_RS15425	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABB96_RS15430	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABB96_RS15435	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABB96_RS15440	COG0649	NAD binding
ABB96_RS15445	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ABB96_RS15455	COG1034	ATP synthesis coupled electron transport
ABB96_RS15460	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ABB96_RS15465	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABB96_RS15475	COG0713	ATP synthesis coupled electron transport
ABB96_RS15490	COG1007	ATP synthesis coupled electron transport
ABB96_RS15500	COG4774	siderophore transport
ABB96_RS15505	COG4774	siderophore transport
ABB96_RS15520	COG0028	Belongs to the TPP enzyme family
ABB96_RS15525	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS15530	COG0583	DNA-binding transcription factor activity
ABB96_RS15535	COG0560	Phosphoserine phosphatase
ABB96_RS15540	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABB96_RS15545	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ABB96_RS15550	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABB96_RS15560	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
ABB96_RS15565	COG0308	aminopeptidase N
ABB96_RS15585	COG0028	Belongs to the TPP enzyme family
ABB96_RS15605	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS15615	COG0318	PFAM AMP-dependent synthetase and ligase
ABB96_RS15625	COG1802	Transcriptional regulator
ABB96_RS15635	COG1802	Transcriptional regulator
ABB96_RS15645	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS15665	COG1126	abc transporter atp-binding protein
ABB96_RS15670	COG0765	amino acid transport
ABB96_RS15675	COG0765	amino acid transport
ABB96_RS15690	COG1538	Outer membrane efflux protein
ABB96_RS15695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABB96_RS15700	COG2274	protein secretion by the type I secretion system
ABB96_RS15705	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
ABB96_RS15715	COG2994	toxin metabolic process
ABB96_RS15730	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS15735	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
ABB96_RS15745	COG0583	DNA-binding transcription factor activity
ABB96_RS15755	COG0142	geranyltranstransferase activity
ABB96_RS15765	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABB96_RS15770	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ABB96_RS15775	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABB96_RS15780	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ABB96_RS15825	COG3712	iron ion homeostasis
ABB96_RS15830	COG4774	siderophore transport
ABB96_RS15835	COG2353	YceI-like domain
ABB96_RS15850	COG0019	diaminopimelate decarboxylase activity
ABB96_RS15870	COG0747	negative chemotaxis
ABB96_RS15875	COG0601	transmembrane transport
ABB96_RS15880	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS15890	COG0154	amidase activity
ABB96_RS15895	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ABB96_RS15920	COG2154	pterin-4-alpha-carbinolamine dehydratase
ABB96_RS15930	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABB96_RS15940	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ABB96_RS15945	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABB96_RS15950	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABB96_RS15955	COG1929	Belongs to the glycerate kinase type-1 family
ABB96_RS15960	COG0469	pyruvate kinase activity
ABB96_RS15965	COG0700	Nucleoside recognition
ABB96_RS16000	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ABB96_RS16005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABB96_RS16020	COG0823	Involved in the tonB-independent uptake of proteins
ABB96_RS16030	COG0848	biopolymer transport protein
ABB96_RS16035	COG0811	peptide transport
ABB96_RS16040	COG0824	Thioesterase
ABB96_RS16045	COG0442	prolyl-tRNA aminoacylation
ABB96_RS16050	COG0494	nUDIX hydrolase
ABB96_RS16065	COG2135	peptidase activity
ABB96_RS16135	COG1196	nuclear chromosome segregation
ABB96_RS16280	COG1464	Belongs to the NlpA lipoprotein family
ABB96_RS16310	COG4211	Belongs to the binding-protein-dependent transport system permease family
ABB96_RS16320	COG0154	amidase activity
ABB96_RS16325	COG0288	reversible hydration of carbon dioxide
ABB96_RS16340	COG0514	ATP-dependent DNA helicase (RecQ)
ABB96_RS16345	COG2255	four-way junction helicase activity
ABB96_RS16360	COG0632	four-way junction helicase activity
ABB96_RS16365	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ABB96_RS16385	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABB96_RS16395	COG0006	proline dipeptidase activity
ABB96_RS16420	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ABB96_RS16435	COG4783	chaperone-mediated protein folding
ABB96_RS16440	COG0429	hydrolase of the alpha beta-hydrolase fold
ABB96_RS16470	COG0513	Belongs to the DEAD box helicase family
ABB96_RS16490	COG1546	Belongs to the CinA family
ABB96_RS16490	COG1058	Belongs to the CinA family
ABB96_RS16495	COG1414	Transcriptional regulator
ABB96_RS16515	COG0167	dihydroorotate dehydrogenase activity
ABB96_RS16520	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ABB96_RS16525	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABB96_RS16535	COG0583	DNA-binding transcription factor activity
ABB96_RS16595	COG0280	phosphate acetyltransferase
ABB96_RS16595	COG0281	malic enzyme
ABB96_RS16605	COG0601	transmembrane transport
ABB96_RS16610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS16615	COG4172	Belongs to the ABC transporter superfamily
ABB96_RS16645	COG0640	Transcriptional regulator
ABB96_RS16660	COG3135	benzoate transporter
ABB96_RS16665	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABB96_RS16670	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABB96_RS16675	COG0742	ribosomal rna small subunit methyltransferase
ABB96_RS16690	COG3639	organic phosphonate transmembrane transporter activity
ABB96_RS16695	COG3639	organic phosphonate transmembrane transporter activity
ABB96_RS16700	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ABB96_RS16735	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ABB96_RS16740	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABB96_RS16750	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABB96_RS16755	COG1058	Belongs to the CinA family
ABB96_RS16755	COG1546	Belongs to the CinA family
ABB96_RS16760	COG0284	orotidine-5'-phosphate decarboxylase activity
ABB96_RS16765	COG1252	NADH dehydrogenase
ABB96_RS16780	COG3468	outer membrane autotransporter barrel domain protein
ABB96_RS16785	COG0459	protein refolding
ABB96_RS16790	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ABB96_RS16810	COG1053	succinate dehydrogenase
ABB96_RS16820	COG0583	DNA-binding transcription factor activity
ABB96_RS16825	COG1053	succinate dehydrogenase
ABB96_RS16845	COG3706	GGDEF domain
ABB96_RS16880	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABB96_RS16885	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ABB96_RS16895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABB96_RS16905	COG0069	glutamate synthase activity
ABB96_RS16910	COG2391	methyltransferase activity
ABB96_RS16915	COG0679	Auxin Efflux Carrier
ABB96_RS16940	COG0557	exoribonuclease II activity
ABB96_RS16945	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABB96_RS16955	COG3128	pkhd-type hydroxylase
ABB96_RS16960	COG0776	regulation of translation
ABB96_RS16990	COG0642	Histidine kinase
ABB96_RS16995	COG3158	transport of potassium into the cell
ABB96_RS17000	COG0137	argininosuccinate synthase activity
ABB96_RS17005	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABB96_RS17010	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABB96_RS17020	COG0583	DNA-binding transcription factor activity
ABB96_RS17030	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABB96_RS17050	COG2186	Transcriptional regulator
ABB96_RS17060	COG2223	nitrite transmembrane transporter activity
ABB96_RS17070	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABB96_RS17075	COG0450	alkyl hydroperoxide reductase
ABB96_RS17095	COG1214	PFAM Peptidase M22, glycoprotease
ABB96_RS17100	COG1573	uracil-dna glycosylase
ABB96_RS17105	COG0477	Major facilitator Superfamily
ABB96_RS17110	COG1196	nuclear chromosome segregation
ABB96_RS17120	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABB96_RS17125	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABB96_RS17140	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABB96_RS17145	COG1122	ATPase activity
ABB96_RS17150	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ABB96_RS17155	COG1268	BioY protein
ABB96_RS17175	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABB96_RS17210	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABB96_RS17215	COG2878	Part of a membrane complex involved in electron transport
ABB96_RS17230	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABB96_RS17235	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ABB96_RS17240	COG0251	oxidation-reduction process
ABB96_RS17250	COG3228	Belongs to the MtfA family
ABB96_RS17255	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABB96_RS17265	COG0133	tryptophan synthase activity
ABB96_RS17270	COG0159	tryptophan synthase activity
ABB96_RS17275	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABB96_RS17280	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABB96_RS17295	COG1530	ribonuclease E activity
ABB96_RS17305	COG0546	phosphoglycolate phosphatase activity
ABB96_RS17310	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ABB96_RS17315	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
ABB96_RS17325	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS17330	COG0583	DNA-binding transcription factor activity
ABB96_RS17340	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS17360	COG0251	oxidation-reduction process
ABB96_RS17365	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABB96_RS17365	COG1017	nitric oxide dioxygenase activity
ABB96_RS17370	COG2031	fatty acid transporter
ABB96_RS17375	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS17380	COG1802	Transcriptional regulator
ABB96_RS17390	COG1278	Cold shock
ABB96_RS17395	COG0583	DNA-binding transcription factor activity
ABB96_RS17415	COG0183	Belongs to the thiolase family
ABB96_RS17425	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS17430	COG0583	DNA-binding transcription factor activity
ABB96_RS17435	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS17440	COG1024	Enoyl-CoA hydratase
ABB96_RS17445	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS17450	COG1253	flavin adenine dinucleotide binding
ABB96_RS17455	COG1285	pathogenesis
ABB96_RS17465	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB96_RS17480	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABB96_RS17490	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABB96_RS17500	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS17505	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS17510	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS17530	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABB96_RS17535	COG1024	Enoyl-CoA hydratase
ABB96_RS17540	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS17560	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABB96_RS17565	COG0022	dehydrogenase e1 component
ABB96_RS17570	COG1024	Enoyl-CoA hydratase
ABB96_RS17575	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABB96_RS17595	COG0683	leucine binding
ABB96_RS17600	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABB96_RS17605	COG0411	ABC transporter
ABB96_RS17615	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABB96_RS17630	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS17665	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ABB96_RS17670	COG0793	Belongs to the peptidase S41A family
ABB96_RS17675	COG4942	peptidase
ABB96_RS17680	COG0588	phosphoglycerate mutase activity
ABB96_RS17685	COG1054	Belongs to the UPF0176 family
ABB96_RS17690	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABB96_RS17695	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
ABB96_RS17700	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABB96_RS17705	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS17720	COG2226	methyltransferase
ABB96_RS17740	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS17745	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABB96_RS17770	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABB96_RS17795	COG1335	isochorismatase
ABB96_RS17800	COG2309	aminopeptidase activity
ABB96_RS17805	COG0596	Alpha beta hydrolase
ABB96_RS17810	COG3473	Maleate cis-trans isomerase
ABB96_RS17820	COG2068	MobA-Related Protein
ABB96_RS17845	COG2204	response regulator
ABB96_RS17850	COG5000	phosphorelay sensor kinase activity
ABB96_RS17860	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABB96_RS17860	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ABB96_RS17870	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
ABB96_RS17900	COG0583	DNA-binding transcription factor activity
ABB96_RS17915	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ABB96_RS17920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB96_RS17925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS17940	COG0758	DNA mediated transformation
ABB96_RS17945	COG1522	sequence-specific DNA binding
ABB96_RS17955	COG0242	peptide deformylase activity
ABB96_RS17970	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABB96_RS17980	COG0546	phosphoglycolate phosphatase activity
ABB96_RS18000	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABB96_RS18005	COG1942	4-Oxalocrotonate Tautomerase
ABB96_RS18010	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABB96_RS18035	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABB96_RS18055	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABB96_RS18060	COG1024	Enoyl-CoA hydratase
ABB96_RS18065	COG1414	Transcriptional regulator
ABB96_RS18070	COG0318	PFAM AMP-dependent synthetase and ligase
ABB96_RS18075	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS18105	COG0583	DNA-binding transcription factor activity
ABB96_RS18120	COG3422	double-strand break repair
ABB96_RS18125	COG0330	HflC and HflK could
ABB96_RS18135	COG0251	oxidation-reduction process
ABB96_RS18180	COG3723	Recombinational DNA repair protein, rece pathway
ABB96_RS18215	COG0582	viral genome integration into host DNA
ABB96_RS18240	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABB96_RS18250	COG0706	membrane insertase activity
ABB96_RS18255	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ABB96_RS18260	COG0594	ribonuclease P activity
ABB96_RS18265	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ABB96_RS18270	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABB96_RS18285	COG1414	Transcriptional regulator
ABB96_RS18290	COG0154	amidase activity
ABB96_RS18305	COG1304	FMN binding
ABB96_RS18325	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS18345	COG1960	acyl-CoA dehydrogenase activity
ABB96_RS18360	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABB96_RS18375	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABB96_RS18380	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS18390	COG2358	TRAP transporter, solute receptor (TAXI family
ABB96_RS18400	COG1629	transport
ABB96_RS18405	COG2922	Belongs to the Smg family
ABB96_RS18430	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABB96_RS18435	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS18440	COG1028	Short-chain dehydrogenase reductase Sdr
ABB96_RS18445	COG1012	belongs to the aldehyde dehydrogenase family
ABB96_RS18455	COG0028	Belongs to the TPP enzyme family
ABB96_RS18460	COG1522	sequence-specific DNA binding
ABB96_RS18465	COG3781	membrane
ABB96_RS18475	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABB96_RS18495	COG4206	TonB-dependent receptor
ABB96_RS18500	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ABB96_RS18505	COG2022	thiamine diphosphate biosynthetic process
ABB96_RS18510	COG0351	phosphomethylpyrimidine kinase
ABB96_RS18515	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABB96_RS18530	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ABB96_RS18540	COG0628	permease
ABB96_RS18550	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABB96_RS18560	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ABB96_RS18565	COG0049	tRNA binding
ABB96_RS18570	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABB96_RS18575	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABB96_RS18580	COG0051	transcription antitermination factor activity, RNA binding
ABB96_RS18585	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABB96_RS18590	COG0088	Forms part of the polypeptide exit tunnel
ABB96_RS18595	COG0089	rRNA binding
ABB96_RS18600	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABB96_RS18605	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ABB96_RS18610	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABB96_RS18615	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABB96_RS18620	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ABB96_RS18625	COG0255	Belongs to the universal ribosomal protein uL29 family
ABB96_RS18630	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABB96_RS18650	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABB96_RS18655	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABB96_RS18660	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABB96_RS18665	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABB96_RS18670	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABB96_RS18675	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABB96_RS18680	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ABB96_RS18685	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABB96_RS18690	COG1841	ribosomal large subunit assembly
ABB96_RS18695	COG0200	Binds to the 23S rRNA
ABB96_RS18700	COG0201	protein transport
ABB96_RS18705	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABB96_RS18710	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABB96_RS18715	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ABB96_RS18720	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABB96_RS18725	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABB96_RS18730	COG0202	RNA polymerase activity
ABB96_RS18735	COG0203	ribosomal protein L17
ABB96_RS18740	COG0537	adenosine 5'-monophosphoramidase activity
ABB96_RS18745	COG1324	tolerance protein
ABB96_RS18750	COG4232	protein-disulfide reductase activity
ABB96_RS18765	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABB96_RS18775	COG1333	cytochrome c biogenesis protein
ABB96_RS18780	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ABB96_RS18795	COG1965	Belongs to the frataxin family
ABB96_RS18805	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ABB96_RS18810	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ABB96_RS18815	COG0232	Belongs to the dGTPase family. Type 2 subfamily
ABB96_RS18830	COG2814	Major facilitator Superfamily
ABB96_RS18835	COG0629	single-stranded DNA binding
ABB96_RS18875	COG0402	S-adenosylhomocysteine deaminase activity
ABB96_RS18885	COG0438	transferase activity, transferring glycosyl groups
ABB96_RS18905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS18930	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABB96_RS18935	COG2186	Transcriptional regulator
ABB96_RS18955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABB96_RS18960	COG1956	GAF domain-containing protein
ABB96_RS18965	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABB96_RS18980	COG1652	LysM domain
ABB96_RS18995	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABB96_RS19010	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABB96_RS19040	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS19055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS19070	COG1024	Enoyl-CoA hydratase
ABB96_RS19085	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS19090	COG1309	transcriptional regulator
ABB96_RS19095	COG2816	NAD+ diphosphatase activity
ABB96_RS19100	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABB96_RS19190	COG2814	Major facilitator Superfamily
ABB96_RS19195	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ABB96_RS19215	COG1999	signal sequence binding
ABB96_RS19220	COG0109	protoheme IX farnesyltransferase activity
ABB96_RS19260	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABB96_RS19280	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABB96_RS19285	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABB96_RS19300	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABB96_RS19310	COG0070	glutamate synthase
ABB96_RS19310	COG0069	glutamate synthase activity
ABB96_RS19310	COG0067	glutamate synthase
ABB96_RS19320	COG3047	cAMP biosynthetic process
ABB96_RS19330	COG1127	ABC transporter
ABB96_RS19335	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABB96_RS19340	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABB96_RS19345	COG2853	Lipoprotein
ABB96_RS19355	COG1131	(ABC) transporter
ABB96_RS19360	COG0842	Transport permease protein
ABB96_RS19370	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABB96_RS19375	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABB96_RS19380	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABB96_RS19385	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABB96_RS19390	COG0131	Imidazoleglycerol-phosphate dehydratase
ABB96_RS19400	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ABB96_RS19405	COG0107	imidazoleglycerol-phosphate synthase activity
ABB96_RS19410	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABB96_RS19415	COG0140	phosphoribosyl-ATP diphosphatase activity
ABB96_RS19420	COG0537	adenosine 5'-monophosphoramidase activity
ABB96_RS19425	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABB96_RS19430	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABB96_RS19445	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS19480	COG3702	type iv secretory pathway
ABB96_RS19485	COG3451	type IV secretory pathway VirB4
ABB96_RS19500	COG3736	Type IV secretory pathway, component VirB8
ABB96_RS19505	COG3504	Conjugal transfer protein
ABB96_RS19510	COG2948	multi-organism process
ABB96_RS19515	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
ABB96_RS19525	COG0697	spore germination
ABB96_RS19545	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABB96_RS19550	COG0747	negative chemotaxis
ABB96_RS19555	COG0601	transmembrane transport
ABB96_RS19560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABB96_RS19565	COG0444	Belongs to the ABC transporter superfamily
ABB96_RS19575	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABB96_RS19585	COG0494	nUDIX hydrolase
ABB96_RS19625	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
ABB96_RS19630	COG0237	dephospho-CoA kinase activity
ABB96_RS19635	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ABB96_RS19650	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ABB96_RS19655	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABB96_RS19665	COG0477	Major facilitator Superfamily
ABB96_RS19670	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABB96_RS19685	COG1126	abc transporter atp-binding protein
ABB96_RS19690	COG0765	amino acid transport
ABB96_RS19695	COG4597	amino acid ABC transporter
ABB96_RS19700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABB96_RS19705	COG2884	Cell division ATP-binding protein ftsE
ABB96_RS19710	COG2177	Part of the ABC transporter FtsEX involved in
ABB96_RS19715	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ABB96_RS19725	COG1194	a g-specific adenine glycosylase
ABB96_RS19735	COG2226	methyltransferase
ABB96_RS19745	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS19750	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS19765	COG1024	Enoyl-CoA hydratase
ABB96_RS19785	COG1024	Enoyl-CoA hydratase
ABB96_RS19790	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABB96_RS19795	COG3181	Tripartite tricarboxylate transporter family receptor
ABB96_RS19805	COG0753	catalase activity
ABB96_RS19810	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABB96_RS19815	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABB96_RS19825	COG2175	clavaminate synthase activity
ABB96_RS19830	COG1473	amidohydrolase
ABB96_RS19835	COG4608	Belongs to the ABC transporter superfamily
ABB96_RS19840	COG0444	Belongs to the ABC transporter superfamily
ABB96_RS19855	COG0747	negative chemotaxis
ABB96_RS19860	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABB96_RS19895	COG0436	Aminotransferase
ABB96_RS19900	COG1278	Cold shock