locus-tag class description WU28_RS00005 PF13932 GidA associated domain WU28_RS00005 PF01134 Glucose inhibited division protein A WU28_RS00010 PF02527 rRNA small subunit methyltransferase G WU28_RS00015 PF13614 AAA domain WU28_RS00025 PF17762 HTH domain found in ParB protein WU28_RS00025 PF02195 ParB-like nuclease domain WU28_RS00030 PF00710 Asparaginase, N-terminal WU28_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain WU28_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain WU28_RS00035 PF00710 Asparaginase, N-terminal WU28_RS00055 PF03143 Elongation factor Tu C-terminal domain WU28_RS00055 PF00009 Elongation factor Tu GTP binding domain WU28_RS00055 PF03144 Elongation factor Tu domain 2 WU28_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WU28_RS00070 PF00467 KOW motif WU28_RS00070 PF02357 Transcription termination factor nusG WU28_RS00075 PF00298 Ribosomal protein L11, RNA binding domain WU28_RS00075 PF03946 Ribosomal protein L11, N-terminal domain WU28_RS00080 PF00687 Ribosomal protein L1p/L10e family WU28_RS00085 PF00466 Ribosomal protein L10 WU28_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain WU28_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain WU28_RS00095 PF04565 RNA polymerase Rpb2, domain 3 WU28_RS00095 PF10385 RNA polymerase beta subunit external 1 domain WU28_RS00095 PF04563 RNA polymerase beta subunit WU28_RS00095 PF00562 RNA polymerase Rpb2, domain 6 WU28_RS00095 PF04561 RNA polymerase Rpb2, domain 2 WU28_RS00095 PF04560 RNA polymerase Rpb2, domain 7 WU28_RS00100 PF04997 RNA polymerase Rpb1, domain 1 WU28_RS00100 PF04998 RNA polymerase Rpb1, domain 5 WU28_RS00100 PF05000 RNA polymerase Rpb1, domain 4 WU28_RS00100 PF00623 RNA polymerase Rpb1, domain 2 WU28_RS00100 PF04983 RNA polymerase Rpb1, domain 3 WU28_RS00130 PF00072 Response regulator receiver domain WU28_RS00130 PF00486 Transcriptional regulatory protein, C terminal WU28_RS00140 PF02515 CoA-transferase family III WU28_RS00155 PF01575 MaoC like domain WU28_RS00160 PF03466 LysR substrate binding domain WU28_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS00165 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit WU28_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit WU28_RS00190 PF05746 DALR anticodon binding domain WU28_RS00200 PF01553 Acyltransferase WU28_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU28_RS00215 PF01327 Polypeptide deformylase WU28_RS00250 PF02615 Malate/L-lactate dehydrogenase WU28_RS00255 PF00561 alpha/beta hydrolase fold WU28_RS00260 PF00561 alpha/beta hydrolase fold WU28_RS00260 PF07021 Methionine biosynthesis protein MetW WU28_RS00275 PF07690 Major Facilitator Superfamily WU28_RS00285 PF01177 Asp/Glu/Hydantoin racemase WU28_RS00290 PF00005 ABC transporter WU28_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS00340 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS00355 PF00970 Oxidoreductase FAD-binding domain WU28_RS00355 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS00355 PF00175 Oxidoreductase NAD-binding domain WU28_RS00360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS00370 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS00400 PF00183 Hsp90 protein WU28_RS00405 PF13417 Glutathione S-transferase, N-terminal domain WU28_RS00405 PF00043 Glutathione S-transferase, C-terminal domain WU28_RS00410 PF01510 N-acetylmuramoyl-L-alanine amidase WU28_RS00420 PF01578 Cytochrome C assembly protein WU28_RS00425 PF02978 Signal peptide binding domain WU28_RS00425 PF02881 SRP54-type protein, helical bundle domain WU28_RS00425 PF00448 SRP54-type protein, GTPase domain WU28_RS00440 PF02719 Polysaccharide biosynthesis protein WU28_RS00450 PF10997 Alternate to MurJ WU28_RS00455 PF00862 Sucrose synthase WU28_RS00455 PF00534 Glycosyl transferases group 1 WU28_RS00460 PF02397 Bacterial sugar transferase WU28_RS00465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WU28_RS00475 PF02350 UDP-N-acetylglucosamine 2-epimerase WU28_RS00480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WU28_RS00485 PF00132 Bacterial transferase hexapeptide (six repeats) WU28_RS00490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WU28_RS00490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WU28_RS00495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WU28_RS00500 PF00534 Glycosyl transferases group 1 WU28_RS00500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) WU28_RS00510 PF03309 Type III pantothenate kinase WU28_RS00520 PF02405 Permease MlaE WU28_RS00525 PF00005 ABC transporter WU28_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain WU28_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase WU28_RS00550 PF01063 Amino-transferase class IV WU28_RS00555 PF04359 Protein of unknown function (DUF493) WU28_RS00560 PF03099 Biotin/lipoate A/B protein ligase family WU28_RS00565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WU28_RS00565 PF04055 Radical SAM superfamily WU28_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase WU28_RS00575 PF04321 RmlD substrate binding domain WU28_RS00580 PF16363 GDP-mannose 4,6 dehydratase WU28_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme WU28_RS00600 PF01323 DSBA-like thioredoxin domain WU28_RS00600 PF00085 Thioredoxin WU28_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain WU28_RS00610 PF05746 DALR anticodon binding domain WU28_RS00610 PF00750 tRNA synthetases class I (R) WU28_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS00640 PF13416 Bacterial extracellular solute-binding protein WU28_RS00645 PF00005 ABC transporter WU28_RS00645 PF17912 MalK OB fold domain WU28_RS00650 PF00149 Calcineurin-like phosphoesterase WU28_RS00660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WU28_RS00660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WU28_RS00675 PF00355 Rieske [2Fe-2S] domain WU28_RS00685 PF02653 Branched-chain amino acid transport system / permease component WU28_RS00695 PF00005 ABC transporter WU28_RS00705 PF13458 Periplasmic binding protein WU28_RS00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS00710 PF03466 LysR substrate binding domain WU28_RS00720 PF01425 Amidase WU28_RS00725 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS00725 PF00175 Oxidoreductase NAD-binding domain WU28_RS00725 PF00970 Oxidoreductase FAD-binding domain WU28_RS00730 PF09297 NADH pyrophosphatase zinc ribbon domain WU28_RS00730 PF00293 NUDIX domain WU28_RS00735 PF00440 Bacterial regulatory proteins, tetR family WU28_RS00740 PF02515 CoA-transferase family III WU28_RS00745 PF00698 Acyl transferase domain WU28_RS00745 PF08240 Alcohol dehydrogenase GroES-like domain WU28_RS00745 PF00109 Beta-ketoacyl synthase, N-terminal domain WU28_RS00745 PF00550 Phosphopantetheine attachment site WU28_RS00745 PF14765 Polyketide synthase dehydratase WU28_RS00745 PF08990 Erythronolide synthase docking WU28_RS00745 PF02801 Beta-ketoacyl synthase, C-terminal domain WU28_RS00745 PF16197 Ketoacyl-synthetase C-terminal extension WU28_RS00745 PF08659 KR domain WU28_RS00750 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS00755 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS00760 PF00005 ABC transporter WU28_RS00770 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS00775 PF00392 Bacterial regulatory proteins, gntR family WU28_RS00775 PF07702 UTRA domain WU28_RS00785 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS00790 PF07702 UTRA domain WU28_RS00790 PF00392 Bacterial regulatory proteins, gntR family WU28_RS00810 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS00815 PF00682 HMGL-like WU28_RS00830 PF02390 Putative methyltransferase WU28_RS00835 PF00561 alpha/beta hydrolase fold WU28_RS00840 PF05690 Thiazole biosynthesis protein ThiG WU28_RS00840 PF02597 ThiS family WU28_RS00845 PF01476 LysM domain WU28_RS00845 PF04972 BON domain WU28_RS00860 PF00701 Dihydrodipicolinate synthetase family WU28_RS00865 PF13185 GAF domain WU28_RS00870 PF00155 Aminotransferase class I and II WU28_RS00875 PF01040 UbiA prenyltransferase family WU28_RS00890 PF00392 Bacterial regulatory proteins, gntR family WU28_RS00890 PF07729 FCD domain WU28_RS00895 PF01274 Malate synthase WU28_RS00915 PF00005 ABC transporter WU28_RS00920 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS00930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS00930 PF03466 LysR substrate binding domain WU28_RS00940 PF00534 Glycosyl transferases group 1 WU28_RS00940 PF13439 Glycosyltransferase Family 4 WU28_RS00945 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS00950 PF01979 Amidohydrolase family WU28_RS00955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS00955 PF03466 LysR substrate binding domain WU28_RS00965 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS00975 PF03328 HpcH/HpaI aldolase/citrate lyase family WU28_RS00985 PF07715 TonB-dependent Receptor Plug Domain WU28_RS00985 PF00593 TonB dependent receptor WU28_RS00990 PF00436 Single-strand binding protein family WU28_RS00995 PF07690 Major Facilitator Superfamily WU28_RS01000 PF17760 UvrA interaction domain WU28_RS01000 PF17755 UvrA DNA-binding domain WU28_RS01005 PF00043 Glutathione S-transferase, C-terminal domain WU28_RS01005 PF13417 Glutathione S-transferase, N-terminal domain WU28_RS01010 PF01966 HD domain WU28_RS01010 PF13286 Phosphohydrolase-associated domain WU28_RS01015 PF01761 3-dehydroquinate synthase WU28_RS01020 PF01202 Shikimate kinase WU28_RS01025 PF00912 Transglycosylase WU28_RS01025 PF00905 Penicillin binding protein transpeptidase domain WU28_RS01025 PF17092 Penicillin-binding protein OB-like domain WU28_RS01030 PF01491 Frataxin-like domain WU28_RS01035 PF13627 Prokaryotic lipoprotein-attachment site WU28_RS01040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WU28_RS01040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WU28_RS01045 PF01578 Cytochrome C assembly protein WU28_RS01050 PF05140 ResB-like family WU28_RS01055 PF00034 Cytochrome c WU28_RS01060 PF01926 50S ribosome-binding GTPase WU28_RS01065 PF00490 Delta-aminolevulinic acid dehydratase WU28_RS01070 PF00892 EamA-like transporter family WU28_RS01075 PF02683 Cytochrome C biogenesis protein transmembrane region WU28_RS01075 PF11412 Disulphide bond corrector protein DsbC WU28_RS01080 PF03091 CutA1 divalent ion tolerance protein WU28_RS01085 PF01230 HIT domain WU28_RS01090 PF01196 Ribosomal protein L17 WU28_RS01095 PF01000 RNA polymerase Rpb3/RpoA insert domain WU28_RS01095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WU28_RS01095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WU28_RS01100 PF00163 Ribosomal protein S4/S9 N-terminal domain WU28_RS01100 PF01479 S4 domain WU28_RS01105 PF00411 Ribosomal protein S11 WU28_RS01110 PF00416 Ribosomal protein S13/S18 WU28_RS01115 PF00444 Ribosomal protein L36 WU28_RS01120 PF01176 Translation initiation factor 1A / IF-1 WU28_RS01125 PF00344 SecY translocase WU28_RS01130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WU28_RS01135 PF00327 Ribosomal protein L30p/L7e WU28_RS01140 PF00333 Ribosomal protein S5, N-terminal domain WU28_RS01140 PF03719 Ribosomal protein S5, C-terminal domain WU28_RS01145 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WU28_RS01150 PF00347 Ribosomal protein L6 WU28_RS01155 PF00410 Ribosomal protein S8 WU28_RS01160 PF00253 Ribosomal protein S14p/S29e WU28_RS01165 PF00281 Ribosomal protein L5 WU28_RS01165 PF00673 ribosomal L5P family C-terminus WU28_RS01170 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WU28_RS01175 PF00238 Ribosomal protein L14p/L23e WU28_RS01185 PF00171 Aldehyde dehydrogenase family WU28_RS01195 PF00366 Ribosomal protein S17 WU28_RS01200 PF00831 Ribosomal L29 protein WU28_RS01205 PF00252 Ribosomal protein L16p/L10e WU28_RS01210 PF00189 Ribosomal protein S3, C-terminal domain WU28_RS01210 PF07650 KH domain WU28_RS01215 PF00237 Ribosomal protein L22p/L17e WU28_RS01220 PF00203 Ribosomal protein S19 WU28_RS01225 PF00181 Ribosomal Proteins L2, RNA binding domain WU28_RS01225 PF03947 Ribosomal Proteins L2, C-terminal domain WU28_RS01230 PF00276 Ribosomal protein L23 WU28_RS01235 PF00573 Ribosomal protein L4/L1 family WU28_RS01240 PF00297 Ribosomal protein L3 WU28_RS01245 PF00338 Ribosomal protein S10p/S20e WU28_RS01250 PF03143 Elongation factor Tu C-terminal domain WU28_RS01250 PF03144 Elongation factor Tu domain 2 WU28_RS01250 PF00009 Elongation factor Tu GTP binding domain WU28_RS01255 PF03144 Elongation factor Tu domain 2 WU28_RS01255 PF00009 Elongation factor Tu GTP binding domain WU28_RS01255 PF03764 Elongation factor G, domain IV WU28_RS01255 PF00679 Elongation factor G C-terminus WU28_RS01255 PF14492 Elongation Factor G, domain II WU28_RS01260 PF00177 Ribosomal protein S7p/S5e WU28_RS01265 PF00164 Ribosomal protein S12/S23 WU28_RS01275 PF02254 TrkA-N domain WU28_RS01275 PF07885 Ion channel WU28_RS01285 PF01594 AI-2E family transporter WU28_RS01295 PF01467 Cytidylyltransferase-like WU28_RS01310 PF08543 Phosphomethylpyrimidine kinase WU28_RS01315 PF05690 Thiazole biosynthesis protein ThiG WU28_RS01320 PF01497 Periplasmic binding protein WU28_RS01325 PF07715 TonB-dependent Receptor Plug Domain WU28_RS01325 PF00593 TonB dependent receptor WU28_RS01330 PF00809 Pterin binding enzyme WU28_RS01330 PF02574 Homocysteine S-methyltransferase WU28_RS01330 PF02310 B12 binding domain WU28_RS01330 PF02607 B12 binding domain WU28_RS01330 PF02965 Vitamin B12 dependent methionine synthase, activation domain WU28_RS01345 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WU28_RS01355 PF01062 Bestrophin, RFP-TM, chloride channel WU28_RS01360 PF01037 Lrp/AsnC ligand binding domain WU28_RS01365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS01365 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS01365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS01375 PF00171 Aldehyde dehydrogenase family WU28_RS01385 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS01390 PF00005 ABC transporter WU28_RS01400 PF01751 Toprim domain WU28_RS01400 PF01131 DNA topoisomerase WU28_RS01415 PF04361 Protein of unknown function (DUF494) WU28_RS01420 PF07715 TonB-dependent Receptor Plug Domain WU28_RS01420 PF00593 TonB dependent receptor WU28_RS01430 PF16868 NMT1-like family WU28_RS01435 PF01168 Alanine racemase, N-terminal domain WU28_RS01435 PF14031 Putative serine dehydratase domain WU28_RS01440 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS01445 PF00202 Aminotransferase class-III WU28_RS01455 PF00364 Biotin-requiring enzyme WU28_RS01455 PF00289 Biotin carboxylase, N-terminal domain WU28_RS01455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU28_RS01455 PF02785 Biotin carboxylase C-terminal domain WU28_RS01460 PF01039 Carboxyl transferase domain WU28_RS01475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS01475 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS01475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS01490 PF00376 MerR family regulatory protein WU28_RS01490 PF09278 MerR, DNA binding WU28_RS01495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS01495 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS01495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS01515 PF01070 FMN-dependent dehydrogenase WU28_RS01520 PF00708 Acylphosphatase WU28_RS01525 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS01530 PF01425 Amidase WU28_RS01535 PF09339 IclR helix-turn-helix domain WU28_RS01535 PF01614 Bacterial transcriptional regulator WU28_RS01540 PF00986 DNA gyrase B subunit, carboxyl terminus WU28_RS01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS01540 PF00204 DNA gyrase B WU28_RS01540 PF18053 DNA gyrase B subunit insert domain WU28_RS01540 PF01751 Toprim domain WU28_RS01545 PF02767 DNA polymerase III beta subunit, central domain WU28_RS01545 PF02768 DNA polymerase III beta subunit, C-terminal domain WU28_RS01545 PF00712 DNA polymerase III beta subunit, N-terminal domain WU28_RS01550 PF08299 Bacterial dnaA protein helix-turn-helix WU28_RS01550 PF11638 DnaA N-terminal domain WU28_RS01550 PF00308 Bacterial dnaA protein WU28_RS01555 PF00468 Ribosomal protein L34 WU28_RS01560 PF00825 Ribonuclease P WU28_RS01565 PF01809 Putative membrane protein insertion efficiency factor WU28_RS01570 PF14849 YidC periplasmic domain WU28_RS01570 PF02096 60Kd inner membrane protein WU28_RS01580 PF02525 Flavodoxin-like fold WU28_RS01585 PF03466 LysR substrate binding domain WU28_RS01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS01600 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS01605 PF00589 Phage integrase family WU28_RS01640 PF03837 RecT family WU28_RS01685 PF01042 Endoribonuclease L-PSP WU28_RS01695 PF01145 SPFH domain / Band 7 family WU28_RS01700 PF07411 Domain of unknown function (DUF1508) WU28_RS01705 PF01168 Alanine racemase, N-terminal domain WU28_RS01705 PF14031 Putative serine dehydratase domain WU28_RS01715 PF03466 LysR substrate binding domain WU28_RS01715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS01735 PF12951 Passenger-associated-transport-repeat WU28_RS01735 PF12951 Passenger-associated-transport-repeat WU28_RS01745 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS01750 PF13193 AMP-binding enzyme C-terminal domain WU28_RS01750 PF00501 AMP-binding enzyme WU28_RS01755 PF09339 IclR helix-turn-helix domain WU28_RS01755 PF01614 Bacterial transcriptional regulator WU28_RS01760 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS01765 PF02627 Carboxymuconolactone decarboxylase family WU28_RS01770 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS01780 PF00491 Arginase family WU28_RS01785 PF00202 Aminotransferase class-III WU28_RS01795 PF07729 FCD domain WU28_RS01795 PF00392 Bacterial regulatory proteins, gntR family WU28_RS01800 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS01805 PF01266 FAD dependent oxidoreductase WU28_RS01810 PF01361 Tautomerase enzyme WU28_RS01815 PF04055 Radical SAM superfamily WU28_RS01815 PF00919 Uncharacterized protein family UPF0004 WU28_RS01815 PF18693 TRAM domain WU28_RS01825 PF03641 Possible lysine decarboxylase WU28_RS01835 PF13419 Haloacid dehalogenase-like hydrolase WU28_RS01845 PF00551 Formyl transferase WU28_RS01845 PF02911 Formyl transferase, C-terminal domain WU28_RS01860 PF01327 Polypeptide deformylase WU28_RS01865 PF00266 Aminotransferase class-V WU28_RS01870 PF01037 Lrp/AsnC ligand binding domain WU28_RS01875 PF17782 DprA winged helix domain WU28_RS01875 PF02481 DNA recombination-mediator protein A WU28_RS01880 PF00682 HMGL-like WU28_RS01890 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS01895 PF00155 Aminotransferase class I and II WU28_RS01900 PF01168 Alanine racemase, N-terminal domain WU28_RS01905 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS01915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS01915 PF03466 LysR substrate binding domain WU28_RS01920 PF01810 LysE type translocator WU28_RS01940 PF01958 Domain of unknown function DUF108 WU28_RS01940 PF03447 Homoserine dehydrogenase, NAD binding domain WU28_RS01950 PF01189 16S rRNA methyltransferase RsmB/F WU28_RS01950 PF01029 NusB family WU28_RS01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS01960 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS01960 PF00672 HAMP domain WU28_RS01960 PF00989 PAS fold WU28_RS01965 PF02954 Bacterial regulatory protein, Fis family WU28_RS01965 PF00072 Response regulator receiver domain WU28_RS01965 PF00158 Sigma-54 interaction domain WU28_RS01970 PF02254 TrkA-N domain WU28_RS01970 PF02080 TrkA-C domain WU28_RS01975 PF02386 Cation transport protein WU28_RS01980 PF01047 MarR family WU28_RS01990 PF12804 MobA-like NTP transferase domain WU28_RS02000 PF17645 Arylmalonate decarboxylase WU28_RS02005 PF00561 alpha/beta hydrolase fold WU28_RS02015 PF00857 Isochorismatase family WU28_RS02025 PF00355 Rieske [2Fe-2S] domain WU28_RS02025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WU28_RS02030 PF14759 Reductase C-terminal WU28_RS02030 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS02035 PF00355 Rieske [2Fe-2S] domain WU28_RS02040 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS02045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU28_RS02045 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU28_RS02050 PF03450 CO dehydrogenase flavoprotein C-terminal domain WU28_RS02050 PF00941 FAD binding domain in molybdopterin dehydrogenase WU28_RS02055 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS02055 PF01799 [2Fe-2S] binding domain WU28_RS02065 PF00005 ABC transporter WU28_RS02070 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS02080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS02085 PF04107 Glutamate-cysteine ligase family 2(GCS2) WU28_RS02090 PF08241 Methyltransferase domain WU28_RS02100 PF00588 SpoU rRNA Methylase family WU28_RS02105 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WU28_RS02110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WU28_RS02115 PF02556 Preprotein translocase subunit SecB WU28_RS02120 PF00462 Glutaredoxin WU28_RS02125 PF12368 Rhodanase C-terminal WU28_RS02125 PF00581 Rhodanese-like domain WU28_RS02125 PF17773 UPF0176 acylphosphatase like domain WU28_RS02130 PF00300 Histidine phosphatase superfamily (branch 1) WU28_RS02135 PF01551 Peptidase family M23 WU28_RS02140 PF03572 Peptidase family S41 WU28_RS02140 PF13180 PDZ domain WU28_RS02145 PF00899 ThiF family WU28_RS02155 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02170 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU28_RS02185 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS02190 PF00005 ABC transporter WU28_RS02195 PF00005 ABC transporter WU28_RS02195 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS02200 PF02653 Branched-chain amino acid transport system / permease component WU28_RS02205 PF13458 Periplasmic binding protein WU28_RS02215 PF00501 AMP-binding enzyme WU28_RS02215 PF13193 AMP-binding enzyme C-terminal domain WU28_RS02220 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS02220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS02220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS02225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU28_RS02225 PF00364 Biotin-requiring enzyme WU28_RS02225 PF02817 e3 binding domain WU28_RS02230 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS02235 PF02780 Transketolase, C-terminal domain WU28_RS02235 PF02779 Transketolase, pyrimidine binding domain WU28_RS02240 PF00676 Dehydrogenase E1 component WU28_RS02250 PF13380 CoA binding domain WU28_RS02250 PF13607 Succinyl-CoA ligase like flavodoxin domain WU28_RS02255 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS02260 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS02260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS02265 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS02270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WU28_RS02270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WU28_RS02285 PF01575 MaoC like domain WU28_RS02290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS02290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS02290 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS02295 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02300 PF02515 CoA-transferase family III WU28_RS02305 PF03466 LysR substrate binding domain WU28_RS02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS02310 PF00701 Dihydrodipicolinate synthetase family WU28_RS02335 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS02340 PF03466 LysR substrate binding domain WU28_RS02345 PF01565 FAD binding domain WU28_RS02345 PF09330 D-lactate dehydrogenase, membrane binding WU28_RS02350 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS02350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS02350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS02355 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS02355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS02355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS02360 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02365 PF07687 Peptidase dimerisation domain WU28_RS02365 PF01546 Peptidase family M20/M25/M40 WU28_RS02375 PF01042 Endoribonuclease L-PSP WU28_RS02385 PF08240 Alcohol dehydrogenase GroES-like domain WU28_RS02385 PF00107 Zinc-binding dehydrogenase WU28_RS02390 PF03466 LysR substrate binding domain WU28_RS02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS02395 PF13607 Succinyl-CoA ligase like flavodoxin domain WU28_RS02395 PF13380 CoA binding domain WU28_RS02400 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS02410 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02415 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family WU28_RS02420 PF01380 SIS domain WU28_RS02425 PF01037 Lrp/AsnC ligand binding domain WU28_RS02430 PF00108 Thiolase, N-terminal domain WU28_RS02430 PF02803 Thiolase, C-terminal domain WU28_RS02435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU28_RS02435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU28_RS02435 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS02440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS02440 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS02440 PF12806 Acetyl-CoA dehydrogenase C-terminal like WU28_RS02440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS02445 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02450 PF00583 Acetyltransferase (GNAT) family WU28_RS02450 PF13380 CoA binding domain WU28_RS02450 PF13607 Succinyl-CoA ligase like flavodoxin domain WU28_RS02465 PF00384 Molybdopterin oxidoreductase WU28_RS02465 PF01568 Molydopterin dinucleotide binding domain WU28_RS02485 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain WU28_RS02485 PF01488 Shikimate / quinate 5-dehydrogenase WU28_RS02485 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain WU28_RS02490 PF00472 RF-1 domain WU28_RS02490 PF03462 PCRF domain WU28_RS02495 PF17827 PrmC N-terminal domain WU28_RS02495 PF05175 Methyltransferase small domain WU28_RS02500 PF00462 Glutaredoxin WU28_RS02505 PF02441 Flavoprotein WU28_RS02510 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS02515 PF09084 NMT1/THI5 like WU28_RS02520 PF03450 CO dehydrogenase flavoprotein C-terminal domain WU28_RS02520 PF00941 FAD binding domain in molybdopterin dehydrogenase WU28_RS02525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU28_RS02525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WU28_RS02545 PF03330 Lytic transglycolase WU28_RS02545 PF05036 Sporulation related domain WU28_RS02550 PF03668 P-loop ATPase protein family WU28_RS02560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU28_RS02560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU28_RS02560 PF00034 Cytochrome c WU28_RS02565 PF07475 HPr Serine kinase C-terminal domain WU28_RS02565 PF02603 HPr Serine kinase N terminus WU28_RS02570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WU28_RS02575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WU28_RS02580 PF00005 ABC transporter WU28_RS02600 PF01380 SIS domain WU28_RS02600 PF00571 CBS domain WU28_RS02605 PF01370 NAD dependent epimerase/dehydratase family WU28_RS02605 PF02222 ATP-grasp domain WU28_RS02610 PF07715 TonB-dependent Receptor Plug Domain WU28_RS02610 PF00593 TonB dependent receptor WU28_RS02620 PF05199 GMC oxidoreductase WU28_RS02620 PF00732 GMC oxidoreductase WU28_RS02640 PF01336 OB-fold nucleic acid binding domain WU28_RS02640 PF00152 tRNA synthetases class II (D, K and N) WU28_RS02640 PF02938 GAD domain WU28_RS02645 PF03372 Endonuclease/Exonuclease/phosphatase family WU28_RS02650 PF13091 PLD-like domain WU28_RS02675 PF13458 Periplasmic binding protein WU28_RS02680 PF01425 Amidase WU28_RS02685 PF05995 Cysteine dioxygenase type I WU28_RS02690 PF09339 IclR helix-turn-helix domain WU28_RS02690 PF01614 Bacterial transcriptional regulator WU28_RS02695 PF02515 CoA-transferase family III WU28_RS02700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU28_RS02700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU28_RS02700 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS02705 PF05275 Copper resistance protein B precursor (CopB) WU28_RS02710 PF07731 Multicopper oxidase WU28_RS02710 PF00394 Multicopper oxidase WU28_RS02710 PF07732 Multicopper oxidase WU28_RS02740 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain WU28_RS02740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU28_RS02740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU28_RS02745 PF02515 CoA-transferase family III WU28_RS02750 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS02750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS02750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS02765 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS02770 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS02775 PF01256 Carbohydrate kinase WU28_RS02795 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS02800 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS02800 PF12911 N-terminal TM domain of oligopeptide transport permease C WU28_RS02805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS02805 PF00005 ABC transporter WU28_RS02815 PF01546 Peptidase family M20/M25/M40 WU28_RS02815 PF07687 Peptidase dimerisation domain WU28_RS02825 PF00580 UvrD/REP helicase N-terminal domain WU28_RS02825 PF13361 UvrD-like helicase C-terminal domain WU28_RS02830 PF18074 Primosomal protein N C-terminal domain WU28_RS02830 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WU28_RS02830 PF17764 3′ DNA-binding domain (3′BD) WU28_RS02830 PF00271 Helicase conserved C-terminal domain WU28_RS02830 PF00270 DEAD/DEAH box helicase WU28_RS02835 PF01208 Uroporphyrinogen decarboxylase (URO-D) WU28_RS02845 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WU28_RS02850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU28_RS02850 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU28_RS02855 PF00231 ATP synthase WU28_RS02860 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU28_RS02860 PF00306 ATP synthase alpha/beta chain, C terminal domain WU28_RS02860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU28_RS02865 PF00213 ATP synthase delta (OSCP) subunit WU28_RS02870 PF00430 ATP synthase B/B' CF(0) WU28_RS02875 PF00137 ATP synthase subunit C WU28_RS02880 PF00119 ATP synthase A chain WU28_RS02905 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS02910 PF13180 PDZ domain WU28_RS02910 PF17820 PDZ domain WU28_RS02915 PF13192 Thioredoxin domain WU28_RS02915 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS02925 PF01171 PP-loop family WU28_RS02935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU28_RS02935 PF01842 ACT domain WU28_RS02935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU28_RS02940 PF10411 Disulfide bond isomerase protein N-terminus WU28_RS02940 PF13098 Thioredoxin-like domain WU28_RS02945 PF01494 FAD binding domain WU28_RS02950 PF06725 3D domain WU28_RS02950 PF03562 MltA specific insert domain WU28_RS02955 PF04379 ApaG domain WU28_RS02960 PF00834 Ribulose-phosphate 3 epimerase family WU28_RS02965 PF13419 Haloacid dehalogenase-like hydrolase WU28_RS02970 PF04715 Anthranilate synthase component I, N terminal region WU28_RS02970 PF00425 chorismate binding enzyme WU28_RS02975 PF00117 Glutamine amidotransferase class-I WU28_RS02980 PF02885 Glycosyl transferase family, helical bundle domain WU28_RS02980 PF00591 Glycosyl transferase family, a/b domain WU28_RS02985 PF00218 Indole-3-glycerol phosphate synthase WU28_RS03005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS03005 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS03005 PF18158 Adaptive response protein AidB N-terminal domain WU28_RS03010 PF03466 LysR substrate binding domain WU28_RS03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS03015 PF00551 Formyl transferase WU28_RS03025 PF01613 Flavin reductase like domain WU28_RS03030 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WU28_RS03030 PF01243 Pyridoxamine 5'-phosphate oxidase WU28_RS03040 PF07690 Major Facilitator Superfamily WU28_RS03045 PF00899 ThiF family WU28_RS03050 PF07702 UTRA domain WU28_RS03050 PF00392 Bacterial regulatory proteins, gntR family WU28_RS03055 PF13193 AMP-binding enzyme C-terminal domain WU28_RS03055 PF00501 AMP-binding enzyme WU28_RS03060 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS03075 PF01063 Amino-transferase class IV WU28_RS03080 PF00425 chorismate binding enzyme WU28_RS03080 PF04715 Anthranilate synthase component I, N terminal region WU28_RS03085 PF17760 UvrA interaction domain WU28_RS03085 PF00005 ABC transporter WU28_RS03085 PF17755 UvrA DNA-binding domain WU28_RS03095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS03095 PF03466 LysR substrate binding domain WU28_RS03100 PF00535 Glycosyl transferase family 2 WU28_RS03105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS03110 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS03125 PF12848 ABC transporter WU28_RS03125 PF00005 ABC transporter WU28_RS03145 PF03776 Septum formation topological specificity factor MinE WU28_RS03150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WU28_RS03155 PF03775 Septum formation inhibitor MinC, C-terminal domain WU28_RS03155 PF05209 Septum formation inhibitor MinC, N-terminal domain WU28_RS03160 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain WU28_RS03160 PF00749 tRNA synthetases class I (E and Q), catalytic domain WU28_RS03165 PF01654 Cytochrome bd terminal oxidase subunit I WU28_RS03175 PF02702 Osmosensitive K+ channel His kinase sensor domain WU28_RS03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS03175 PF13493 Domain of unknown function (DUF4118) WU28_RS03180 PF00072 Response regulator receiver domain WU28_RS03180 PF00486 Transcriptional regulatory protein, C terminal WU28_RS03195 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS03200 PF04391 Protein of unknown function (DUF533) WU28_RS03220 PF01476 LysM domain WU28_RS03220 PF01464 Transglycosylase SLT domain WU28_RS03225 PF16123 Hydroxyacylglutathione hydrolase C-terminus WU28_RS03225 PF00753 Metallo-beta-lactamase superfamily WU28_RS03230 PF08241 Methyltransferase domain WU28_RS03235 PF00075 RNase H WU28_RS03245 PF05199 GMC oxidoreductase WU28_RS03245 PF00732 GMC oxidoreductase WU28_RS03285 PF01575 MaoC like domain WU28_RS03290 PF02803 Thiolase, C-terminal domain WU28_RS03290 PF00108 Thiolase, N-terminal domain WU28_RS03300 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS03305 PF00106 short chain dehydrogenase WU28_RS03315 PF00005 ABC transporter WU28_RS03315 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS03320 PF00005 ABC transporter WU28_RS03325 PF02653 Branched-chain amino acid transport system / permease component WU28_RS03335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS03335 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS03335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS03340 PF08361 MAATS-type transcriptional repressor, C-terminal region WU28_RS03340 PF00440 Bacterial regulatory proteins, tetR family WU28_RS03345 PF14535 AMP-binding enzyme C-terminal domain WU28_RS03345 PF00501 AMP-binding enzyme WU28_RS03350 PF02515 CoA-transferase family III WU28_RS03370 PF04285 Protein of unknown function (DUF444) WU28_RS03375 PF04293 SpoVR like protein WU28_RS03390 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS03395 PF05034 Methylaspartate ammonia-lyase N-terminus WU28_RS03395 PF07476 Methylaspartate ammonia-lyase C-terminus WU28_RS03400 PF00392 Bacterial regulatory proteins, gntR family WU28_RS03400 PF07702 UTRA domain WU28_RS03415 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS03420 PF00376 MerR family regulatory protein WU28_RS03420 PF09278 MerR, DNA binding WU28_RS03425 PF01774 UreD urease accessory protein WU28_RS03430 PF00547 Urease, gamma subunit WU28_RS03435 PF04955 HupE / UreJ protein WU28_RS03440 PF00699 Urease beta subunit WU28_RS03445 PF00449 Urease alpha-subunit, N-terminal domain WU28_RS03445 PF01979 Amidohydrolase family WU28_RS03450 PF05194 UreE urease accessory protein, C-terminal domain WU28_RS03450 PF02814 UreE urease accessory protein, N-terminal domain WU28_RS03455 PF01730 UreF WU28_RS03460 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU28_RS03470 PF07364 Metallopeptidase family M81 WU28_RS03470 PF07171 MlrC C-terminus WU28_RS03480 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS03485 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS03490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS03500 PF00202 Aminotransferase class-III WU28_RS03505 PF00155 Aminotransferase class I and II WU28_RS03505 PF00392 Bacterial regulatory proteins, gntR family WU28_RS03510 PF00186 Dihydrofolate reductase WU28_RS03515 PF00303 Thymidylate synthase WU28_RS03525 PF03232 Ubiquinone biosynthesis protein COQ7 WU28_RS03530 PF00953 Glycosyl transferase family 4 WU28_RS03535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU28_RS03535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU28_RS03535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU28_RS03540 PF01370 NAD dependent epimerase/dehydratase family WU28_RS03545 PF03023 Lipid II flippase MurJ WU28_RS03550 PF13439 Glycosyltransferase Family 4 WU28_RS03550 PF00534 Glycosyl transferases group 1 WU28_RS03555 PF13537 Glutamine amidotransferase domain WU28_RS03555 PF00733 Asparagine synthase WU28_RS03560 PF00534 Glycosyl transferases group 1 WU28_RS03560 PF13439 Glycosyltransferase Family 4 WU28_RS03565 PF13439 Glycosyltransferase Family 4 WU28_RS03565 PF00534 Glycosyl transferases group 1 WU28_RS03570 PF13477 Glycosyl transferase 4-like WU28_RS03570 PF00534 Glycosyl transferases group 1 WU28_RS03575 PF00342 Phosphoglucose isomerase WU28_RS03580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU28_RS03580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU28_RS03580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU28_RS03580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU28_RS03590 PF02913 FAD linked oxidases, C-terminal domain WU28_RS03590 PF01565 FAD binding domain WU28_RS03595 PF00072 Response regulator receiver domain WU28_RS03595 PF00486 Transcriptional regulatory protein, C terminal WU28_RS03600 PF08521 Two-component sensor kinase N-terminal WU28_RS03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS03600 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS03605 PF00884 Sulfatase WU28_RS03615 PF04209 homogentisate 1,2-dioxygenase WU28_RS03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS03620 PF03466 LysR substrate binding domain WU28_RS03630 PF01494 FAD binding domain WU28_RS03640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WU28_RS03640 PF06827 Zinc finger found in FPG and IleRS WU28_RS03640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WU28_RS03650 PF03550 Outer membrane lipoprotein LolB WU28_RS03655 PF08544 GHMP kinases C terminal WU28_RS03655 PF00288 GHMP kinases N terminal domain WU28_RS03665 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WU28_RS03665 PF14572 Phosphoribosyl synthetase-associated domain WU28_RS03670 PF01386 Ribosomal L25p family WU28_RS03670 PF14693 Ribosomal protein TL5, C-terminal domain WU28_RS03675 PF01195 Peptidyl-tRNA hydrolase WU28_RS03685 PF06071 Protein of unknown function (DUF933) WU28_RS03685 PF01926 50S ribosome-binding GTPase WU28_RS03690 PF13356 Arm DNA-binding domain WU28_RS03690 PF00589 Phage integrase family WU28_RS03710 PF01555 DNA methylase WU28_RS03715 PF13175 AAA ATPase domain WU28_RS03750 PF00580 UvrD/REP helicase N-terminal domain WU28_RS03750 PF13361 UvrD-like helicase C-terminal domain WU28_RS03765 PF12951 Passenger-associated-transport-repeat WU28_RS03775 PF00486 Transcriptional regulatory protein, C terminal WU28_RS03775 PF00072 Response regulator receiver domain WU28_RS03790 PF17938 Tetracyclin repressor-like, C-terminal domain WU28_RS03790 PF00440 Bacterial regulatory proteins, tetR family WU28_RS03820 PF01266 FAD dependent oxidoreductase WU28_RS03835 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS03845 PF01810 LysE type translocator WU28_RS03890 PF00561 alpha/beta hydrolase fold WU28_RS03900 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS03905 PF00005 ABC transporter WU28_RS03905 PF03459 TOBE domain WU28_RS03910 PF13091 PLD-like domain WU28_RS03920 PF03167 Uracil DNA glycosylase superfamily WU28_RS03925 PF00270 DEAD/DEAH box helicase WU28_RS03925 PF00271 Helicase conserved C-terminal domain WU28_RS03935 PF12627 Probable RNA and SrmB- binding site of polymerase A WU28_RS03935 PF01743 Poly A polymerase head domain WU28_RS03940 PF14718 Soluble lytic murein transglycosylase L domain WU28_RS03940 PF01464 Transglycosylase SLT domain WU28_RS03950 PF07690 Major Facilitator Superfamily WU28_RS03950 PF00083 Sugar (and other) transporter WU28_RS03955 PF00850 Histone deacetylase domain WU28_RS03960 PF03466 LysR substrate binding domain WU28_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS03970 PF02219 Methylenetetrahydrofolate reductase WU28_RS03975 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV WU28_RS03980 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WU28_RS03980 PF05221 S-adenosyl-L-homocysteine hydrolase WU28_RS03985 PF13439 Glycosyltransferase Family 4 WU28_RS03985 PF00534 Glycosyl transferases group 1 WU28_RS03995 PF02773 S-adenosylmethionine synthetase, C-terminal domain WU28_RS03995 PF00438 S-adenosylmethionine synthetase, N-terminal domain WU28_RS03995 PF02772 S-adenosylmethionine synthetase, central domain WU28_RS04005 PF03279 Bacterial lipid A biosynthesis acyltransferase WU28_RS04010 PF01678 Diaminopimelate epimerase WU28_RS04020 PF00589 Phage integrase family WU28_RS04020 PF02899 Phage integrase, N-terminal SAM-like domain WU28_RS04025 PF00593 TonB dependent receptor WU28_RS04025 PF07715 TonB-dependent Receptor Plug Domain WU28_RS04030 PF03824 High-affinity nickel-transport protein WU28_RS04040 PF01297 Zinc-uptake complex component A periplasmic WU28_RS04045 PF00950 ABC 3 transport family WU28_RS04050 PF00005 ABC transporter WU28_RS04060 PF01475 Ferric uptake regulator family WU28_RS04065 PF07683 Cobalamin synthesis protein cobW C-terminal domain WU28_RS04065 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU28_RS04070 PF01258 Prokaryotic dksA/traR C4-type zinc finger WU28_RS04075 PF00227 Proteasome subunit WU28_RS04080 PF00004 ATPase family associated with various cellular activities (AAA) WU28_RS04080 PF07724 AAA domain (Cdc48 subfamily) WU28_RS04080 PF10431 C-terminal, D2-small domain, of ClpB protein WU28_RS04090 PF01923 Cobalamin adenosyltransferase WU28_RS04105 PF02525 Flavodoxin-like fold WU28_RS04110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU28_RS04110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU28_RS04120 PF01970 Tripartite tricarboxylate transporter TctA family WU28_RS04160 PF01790 Prolipoprotein diacylglyceryl transferase WU28_RS04165 PF00920 Dehydratase family WU28_RS04170 PF00034 Cytochrome c WU28_RS04175 PF01625 Peptide methionine sulfoxide reductase WU28_RS04180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU28_RS04185 PF01037 Lrp/AsnC ligand binding domain WU28_RS04225 PF07687 Peptidase dimerisation domain WU28_RS04225 PF01546 Peptidase family M20/M25/M40 WU28_RS04230 PF01979 Amidohydrolase family WU28_RS04235 PF16326 ABC transporter C-terminal domain WU28_RS04235 PF12848 ABC transporter WU28_RS04235 PF00005 ABC transporter WU28_RS04245 PF02381 MraZ protein, putative antitoxin-like WU28_RS04250 PF01795 MraW methylase family WU28_RS04255 PF04999 Cell division protein FtsL WU28_RS04260 PF03717 Penicillin-binding Protein dimerisation domain WU28_RS04260 PF00905 Penicillin binding protein transpeptidase domain WU28_RS04265 PF08245 Mur ligase middle domain WU28_RS04265 PF02875 Mur ligase family, glutamate ligase domain WU28_RS04270 PF00953 Glycosyl transferase family 4 WU28_RS04275 PF02875 Mur ligase family, glutamate ligase domain WU28_RS04275 PF08245 Mur ligase middle domain WU28_RS04280 PF01098 Cell cycle protein WU28_RS04285 PF03033 Glycosyltransferase family 28 N-terminal domain WU28_RS04285 PF04101 Glycosyltransferase family 28 C-terminal domain WU28_RS04290 PF08245 Mur ligase middle domain WU28_RS04290 PF02875 Mur ligase family, glutamate ligase domain WU28_RS04290 PF01225 Mur ligase family, catalytic domain WU28_RS04295 PF01820 D-ala D-ala ligase N-terminus WU28_RS04295 PF07478 D-ala D-ala ligase C-terminus WU28_RS04300 PF03799 Cell division protein FtsQ WU28_RS04300 PF08478 POTRA domain, FtsQ-type WU28_RS04305 PF02491 SHS2 domain inserted in FTSA WU28_RS04310 PF12327 FtsZ family, C-terminal domain WU28_RS04310 PF00091 Tubulin/FtsZ family, GTPase domain WU28_RS04315 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WU28_RS04325 PF01551 Peptidase family M23 WU28_RS04325 PF08525 Opacity-associated protein A N-terminal motif WU28_RS04325 PF01476 LysM domain WU28_RS04330 PF01043 SecA preprotein cross-linking domain WU28_RS04330 PF07517 SecA DEAD-like domain WU28_RS04330 PF02810 SEC-C motif WU28_RS04330 PF07516 SecA Wing and Scaffold domain WU28_RS04340 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS04350 PF00106 short chain dehydrogenase WU28_RS04355 PF01266 FAD dependent oxidoreductase WU28_RS04360 PF01037 Lrp/AsnC ligand binding domain WU28_RS04370 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP WU28_RS04380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain WU28_RS04380 PF08501 Shikimate dehydrogenase substrate binding domain WU28_RS04380 PF01488 Shikimate / quinate 5-dehydrogenase WU28_RS04390 PF00773 RNB domain WU28_RS04395 PF05728 Uncharacterised protein family (UPF0227) WU28_RS04400 PF01225 Mur ligase family, catalytic domain WU28_RS04400 PF02875 Mur ligase family, glutamate ligase domain WU28_RS04400 PF08245 Mur ligase middle domain WU28_RS04405 PF08534 Redoxin WU28_RS04410 PF01220 Dehydroquinase class II WU28_RS04415 PF00364 Biotin-requiring enzyme WU28_RS04420 PF02785 Biotin carboxylase C-terminal domain WU28_RS04420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU28_RS04420 PF00289 Biotin carboxylase, N-terminal domain WU28_RS04435 PF00294 pfkB family carbohydrate kinase WU28_RS04460 PF03062 MBOAT, membrane-bound O-acyltransferase family WU28_RS04465 PF13193 AMP-binding enzyme C-terminal domain WU28_RS04465 PF00501 AMP-binding enzyme WU28_RS04480 PF00268 Ribonucleotide reductase, small chain WU28_RS04485 PF03477 ATP cone domain WU28_RS04485 PF00317 Ribonucleotide reductase, all-alpha domain WU28_RS04485 PF02867 Ribonucleotide reductase, barrel domain WU28_RS04500 PF01037 Lrp/AsnC ligand binding domain WU28_RS04515 PF00749 tRNA synthetases class I (E and Q), catalytic domain WU28_RS04520 PF13607 Succinyl-CoA ligase like flavodoxin domain WU28_RS04520 PF13380 CoA binding domain WU28_RS04520 PF00583 Acetyltransferase (GNAT) family WU28_RS04535 PF07729 FCD domain WU28_RS04535 PF00392 Bacterial regulatory proteins, gntR family WU28_RS04545 PF00270 DEAD/DEAH box helicase WU28_RS04545 PF00271 Helicase conserved C-terminal domain WU28_RS04545 PF03880 DbpA RNA binding domain WU28_RS04550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WU28_RS04555 PF00857 Isochorismatase family WU28_RS04560 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS04565 PF00005 ABC transporter WU28_RS04575 PF02230 Phospholipase/Carboxylesterase WU28_RS04580 PF04751 Protein of unknown function (DUF615) WU28_RS04585 PF01523 Putative modulator of DNA gyrase WU28_RS04590 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS04595 PF00572 Ribosomal protein L13 WU28_RS04600 PF00380 Ribosomal protein S9/S16 WU28_RS04605 PF01118 Semialdehyde dehydrogenase, NAD binding domain WU28_RS04605 PF02774 Semialdehyde dehydrogenase, dimerisation domain WU28_RS04615 PF01521 Iron-sulphur cluster biosynthesis WU28_RS04620 PF03702 Anhydro-N-acetylmuramic acid kinase WU28_RS04625 PF08460 Bacterial SH3 domain WU28_RS04625 PF01551 Peptidase family M23 WU28_RS04635 PF01479 S4 domain WU28_RS04635 PF00579 tRNA synthetases class I (W and Y) WU28_RS04645 PF00464 Serine hydroxymethyltransferase WU28_RS04650 PF03477 ATP cone domain WU28_RS04665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU28_RS04665 PF01872 RibD C-terminal domain WU28_RS04680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS04680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS04680 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS04680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS04680 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS04680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS04690 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS04695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS04695 PF03466 LysR substrate binding domain WU28_RS04700 PF02515 CoA-transferase family III WU28_RS04720 PF05726 Pirin C-terminal cupin domain WU28_RS04720 PF02678 Pirin WU28_RS04735 PF00072 Response regulator receiver domain WU28_RS04740 PF06481 COX Aromatic Rich Motif WU28_RS04740 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WU28_RS04745 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU28_RS04750 PF00510 Cytochrome c oxidase subunit III WU28_RS04755 PF03626 Prokaryotic Cytochrome C oxidase subunit IV WU28_RS04760 PF01022 Bacterial regulatory protein, arsR family WU28_RS04780 PF05114 Protein of unknown function (DUF692) WU28_RS04795 PF07715 TonB-dependent Receptor Plug Domain WU28_RS04795 PF00593 TonB dependent receptor WU28_RS04810 PF01551 Peptidase family M23 WU28_RS04810 PF01476 LysM domain WU28_RS04825 PF04461 Protein of unknown function (DUF520) WU28_RS04835 PF08281 Sigma-70, region 4 WU28_RS04835 PF04542 Sigma-70 region 2 WU28_RS04855 PF00795 Carbon-nitrogen hydrolase WU28_RS04860 PF01523 Putative modulator of DNA gyrase WU28_RS04865 PF00793 DAHP synthetase I family WU28_RS04870 PF05594 Haemagluttinin repeat WU28_RS04870 PF13018 Extended Signal Peptide of Type V secretion system WU28_RS04870 PF05860 haemagglutination activity domain WU28_RS04870 PF13332 Hemagglutinin repeat WU28_RS04870 PF13018 Extended Signal Peptide of Type V secretion system WU28_RS04870 PF05594 Haemagluttinin repeat WU28_RS04870 PF05860 haemagglutination activity domain WU28_RS04870 PF13332 Hemagglutinin repeat WU28_RS04875 PF01565 FAD binding domain WU28_RS04875 PF02913 FAD linked oxidases, C-terminal domain WU28_RS04880 PF02913 FAD linked oxidases, C-terminal domain WU28_RS04880 PF01565 FAD binding domain WU28_RS04885 PF01565 FAD binding domain WU28_RS04890 PF13183 4Fe-4S dicluster domain WU28_RS04890 PF02754 Cysteine-rich domain WU28_RS04895 PF00756 Putative esterase WU28_RS04900 PF07715 TonB-dependent Receptor Plug Domain WU28_RS04900 PF00593 TonB dependent receptor WU28_RS04910 PF02233 NAD(P) transhydrogenase beta subunit WU28_RS04915 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch WU28_RS04920 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch WU28_RS04925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WU28_RS04925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WU28_RS04935 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS04940 PF03466 LysR substrate binding domain WU28_RS04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS04950 PF01925 Sulfite exporter TauE/SafE WU28_RS04955 PF13417 Glutathione S-transferase, N-terminal domain WU28_RS04955 PF00043 Glutathione S-transferase, C-terminal domain WU28_RS04960 PF00206 Lyase WU28_RS04960 PF08328 Adenylosuccinate lyase C-terminal WU28_RS04965 PF01322 Cytochrome C' WU28_RS04985 PF01594 AI-2E family transporter WU28_RS04995 PF00392 Bacterial regulatory proteins, gntR family WU28_RS04995 PF07729 FCD domain WU28_RS05005 PF01425 Amidase WU28_RS05010 PF02515 CoA-transferase family III WU28_RS05015 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS05030 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS05035 PF00005 ABC transporter WU28_RS05050 PF01614 Bacterial transcriptional regulator WU28_RS05050 PF09339 IclR helix-turn-helix domain WU28_RS05060 PF00501 AMP-binding enzyme WU28_RS05060 PF13193 AMP-binding enzyme C-terminal domain WU28_RS05065 PF01042 Endoribonuclease L-PSP WU28_RS05070 PF02653 Branched-chain amino acid transport system / permease component WU28_RS05085 PF00005 ABC transporter WU28_RS05090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WU28_RS05105 PF03466 LysR substrate binding domain WU28_RS05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS05115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU28_RS05120 PF07690 Major Facilitator Superfamily WU28_RS05125 PF03466 LysR substrate binding domain WU28_RS05125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS05140 PF01425 Amidase WU28_RS05145 PF00677 Lumazine binding domain WU28_RS05150 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS05155 PF13404 AsnC-type helix-turn-helix domain WU28_RS05155 PF01037 Lrp/AsnC ligand binding domain WU28_RS05165 PF00501 AMP-binding enzyme WU28_RS05165 PF13193 AMP-binding enzyme C-terminal domain WU28_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS05180 PF00005 ABC transporter WU28_RS05195 PF00107 Zinc-binding dehydrogenase WU28_RS05195 PF08240 Alcohol dehydrogenase GroES-like domain WU28_RS05215 PF00403 Heavy-metal-associated domain WU28_RS05220 PF01966 HD domain WU28_RS05225 PF00155 Aminotransferase class I and II WU28_RS05230 PF03466 LysR substrate binding domain WU28_RS05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS05240 PF00083 Sugar (and other) transporter WU28_RS05260 PF13609 Gram-negative porin WU28_RS05265 PF02548 Ketopantoate hydroxymethyltransferase WU28_RS05270 PF03466 LysR substrate binding domain WU28_RS05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS05335 PF00440 Bacterial regulatory proteins, tetR family WU28_RS05345 PF05170 AsmA family WU28_RS05350 PF03352 Methyladenine glycosylase WU28_RS05355 PF00376 MerR family regulatory protein WU28_RS05355 PF09278 MerR, DNA binding WU28_RS05370 PF01547 Bacterial extracellular solute-binding protein WU28_RS05380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU28_RS05380 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS05385 PF00005 ABC transporter WU28_RS05385 PF08402 TOBE domain WU28_RS05390 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS05395 PF14785 Maltose transport system permease protein MalF P2 domain WU28_RS05395 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS05410 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS05415 PF07729 FCD domain WU28_RS05415 PF00392 Bacterial regulatory proteins, gntR family WU28_RS05445 PF00465 Iron-containing alcohol dehydrogenase WU28_RS05460 PF03180 NLPA lipoprotein WU28_RS05465 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS05470 PF09383 NIL domain WU28_RS05470 PF00005 ABC transporter WU28_RS05475 PF13802 Galactose mutarotase-like WU28_RS05475 PF01055 Glycosyl hydrolases family 31 WU28_RS05485 PF00459 Inositol monophosphatase family WU28_RS05500 PF13193 AMP-binding enzyme C-terminal domain WU28_RS05500 PF00501 AMP-binding enzyme WU28_RS05505 PF07687 Peptidase dimerisation domain WU28_RS05505 PF01546 Peptidase family M20/M25/M40 WU28_RS05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS05510 PF03466 LysR substrate binding domain WU28_RS05515 PF03601 Conserved hypothetical protein 698 WU28_RS05520 PF03061 Thioesterase superfamily WU28_RS05525 PF01769 Divalent cation transporter WU28_RS05525 PF00571 CBS domain WU28_RS05525 PF03448 MgtE intracellular N domain WU28_RS05545 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS05555 PF02609 Exonuclease VII small subunit WU28_RS05560 PF00348 Polyprenyl synthetase WU28_RS05565 PF13292 1-deoxy-D-xylulose-5-phosphate synthase WU28_RS05565 PF02779 Transketolase, pyrimidine binding domain WU28_RS05565 PF02780 Transketolase, C-terminal domain WU28_RS05570 PF02649 Type I GTP cyclohydrolase folE2 WU28_RS05575 PF01250 Ribosomal protein S6 WU28_RS05585 PF01084 Ribosomal protein S18 WU28_RS05590 PF03948 Ribosomal protein L9, C-terminal domain WU28_RS05590 PF01281 Ribosomal protein L9, N-terminal domain WU28_RS05600 PF03796 DnaB-like helicase C terminal domain WU28_RS05600 PF00772 DnaB-like helicase N terminal domain WU28_RS05605 PF13593 SBF-like CPA transporter family (DUF4137) WU28_RS05610 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WU28_RS05615 PF13638 PIN domain WU28_RS05615 PF02562 PhoH-like protein WU28_RS05620 PF00578 AhpC/TSA family WU28_RS05625 PF04430 Protein of unknown function (DUF498/DUF598) WU28_RS05630 PF00155 Aminotransferase class I and II WU28_RS05635 PF03447 Homoserine dehydrogenase, NAD binding domain WU28_RS05635 PF00742 Homoserine dehydrogenase WU28_RS05635 PF01842 ACT domain WU28_RS05640 PF00291 Pyridoxal-phosphate dependent enzyme WU28_RS05640 PF14821 Threonine synthase N terminus WU28_RS05655 PF02615 Malate/L-lactate dehydrogenase WU28_RS05665 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS05680 PF03328 HpcH/HpaI aldolase/citrate lyase family WU28_RS05685 PF01649 Ribosomal protein S20 WU28_RS05695 PF03023 Lipid II flippase MurJ WU28_RS05700 PF00106 short chain dehydrogenase WU28_RS05705 PF05191 Adenylate kinase, active site lid WU28_RS05710 PF02348 Cytidylyltransferase WU28_RS05715 PF03966 Trm112p-like protein WU28_RS05720 PF02606 Tetraacyldisaccharide-1-P 4'-kinase WU28_RS05725 PF02472 Biopolymer transport protein ExbD/TolR WU28_RS05730 PF01618 MotA/TolQ/ExbB proton channel family WU28_RS05740 PF13742 OB-fold nucleic acid binding domain WU28_RS05740 PF02601 Exonuclease VII, large subunit WU28_RS05745 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WU28_RS05745 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WU28_RS05750 PF00654 Voltage gated chloride channel WU28_RS05755 PF02803 Thiolase, C-terminal domain WU28_RS05755 PF00108 Thiolase, N-terminal domain WU28_RS05765 PF00313 'Cold-shock' DNA-binding domain WU28_RS05770 PF02617 ATP-dependent Clp protease adaptor protein ClpS WU28_RS05775 PF17962 Bacterial macroglobulin domain 6 WU28_RS05775 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain WU28_RS05775 PF01835 MG2 domain WU28_RS05775 PF11974 Bacterial alpha-2-macroglobulin MG3 domain WU28_RS05775 PF00207 Alpha-2-macroglobulin family WU28_RS05775 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain WU28_RS05775 PF07703 Alpha-2-macroglobulin bait region domain WU28_RS05775 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain WU28_RS05780 PF00905 Penicillin binding protein transpeptidase domain WU28_RS05780 PF06832 Penicillin-Binding Protein C-terminus Family WU28_RS05780 PF00912 Transglycosylase WU28_RS05785 PF10431 C-terminal, D2-small domain, of ClpB protein WU28_RS05785 PF02861 Clp amino terminal domain, pathogenicity island component WU28_RS05785 PF00004 ATPase family associated with various cellular activities (AAA) WU28_RS05785 PF17871 AAA lid domain WU28_RS05785 PF07724 AAA domain (Cdc48 subfamily) WU28_RS05790 PF04403 Paraquat-inducible protein A WU28_RS05795 PF02470 MlaD protein WU28_RS05805 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WU28_RS05805 PF14850 DNA-binding domain of Proline dehydrogenase WU28_RS05805 PF01619 Proline dehydrogenase WU28_RS05805 PF00171 Aldehyde dehydrogenase family WU28_RS05815 PF13458 Periplasmic binding protein WU28_RS05820 PF02653 Branched-chain amino acid transport system / permease component WU28_RS05825 PF11862 Domain of unknown function (DUF3382) WU28_RS05825 PF02653 Branched-chain amino acid transport system / permease component WU28_RS05830 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS05830 PF00005 ABC transporter WU28_RS05835 PF00005 ABC transporter WU28_RS05840 PF07690 Major Facilitator Superfamily WU28_RS05845 PF00440 Bacterial regulatory proteins, tetR family WU28_RS05855 PF03797 Autotransporter beta-domain WU28_RS05855 PF03212 Pertactin WU28_RS05865 PF00543 Nitrogen regulatory protein P-II WU28_RS05870 PF04380 Membrane fusogenic activity WU28_RS05885 PF00083 Sugar (and other) transporter WU28_RS05885 PF07690 Major Facilitator Superfamily WU28_RS05895 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU28_RS05900 PF00510 Cytochrome c oxidase subunit III WU28_RS05905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV WU28_RS05910 PF02104 SURF1 family WU28_RS05935 PF13411 MerR HTH family regulatory protein WU28_RS05940 PF00403 Heavy-metal-associated domain WU28_RS05960 PF06968 Biotin and Thiamin Synthesis associated domain WU28_RS05960 PF04055 Radical SAM superfamily WU28_RS05975 PF08534 Redoxin WU28_RS05985 PF01738 Dienelactone hydrolase family WU28_RS05995 PF01967 MoaC family WU28_RS06005 PF02391 MoaE protein WU28_RS06010 PF00994 Probable molybdopterin binding domain WU28_RS06015 PF00994 Probable molybdopterin binding domain WU28_RS06015 PF03454 MoeA C-terminal region (domain IV) WU28_RS06015 PF03453 MoeA N-terminal region (domain I and II) WU28_RS06020 PF06463 Molybdenum Cofactor Synthesis C WU28_RS06020 PF04055 Radical SAM superfamily WU28_RS06040 PF00206 Lyase WU28_RS06040 PF14698 Argininosuccinate lyase C-terminal WU28_RS06045 PF00924 Mechanosensitive ion channel WU28_RS06050 PF00795 Carbon-nitrogen hydrolase WU28_RS06050 PF02540 NAD synthase WU28_RS06055 PF00543 Nitrogen regulatory protein P-II WU28_RS06080 PF03466 LysR substrate binding domain WU28_RS06080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS06095 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS06100 PF12911 N-terminal TM domain of oligopeptide transport permease C WU28_RS06100 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS06105 PF03193 RsgA GTPase WU28_RS06110 PF01435 Peptidase family M48 WU28_RS06115 PF00929 Exonuclease WU28_RS06120 PF03853 YjeF-related protein N-terminus WU28_RS06125 PF08223 PaaX-like protein C-terminal domain WU28_RS06125 PF07848 PaaX-like protein WU28_RS06130 PF05138 Phenylacetic acid catabolic protein WU28_RS06135 PF06243 Phenylacetic acid degradation B WU28_RS06140 PF05138 Phenylacetic acid catabolic protein WU28_RS06145 PF01883 Iron-sulfur cluster assembly protein WU28_RS06150 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS06150 PF00175 Oxidoreductase NAD-binding domain WU28_RS06150 PF00970 Oxidoreductase FAD-binding domain WU28_RS06160 PF00171 Aldehyde dehydrogenase family WU28_RS06165 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS06170 PF03061 Thioesterase superfamily WU28_RS06175 PF14535 AMP-binding enzyme C-terminal domain WU28_RS06175 PF00501 AMP-binding enzyme WU28_RS06180 PF16970 Type-1 fimbrial protein, A WU28_RS06200 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS06205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS06205 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU28_RS06210 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU28_RS06215 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal WU28_RS06215 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WU28_RS06215 PF02769 AIR synthase related protein, C-terminal domain WU28_RS06220 PF05860 haemagglutination activity domain WU28_RS06220 PF13332 Hemagglutinin repeat WU28_RS06220 PF13018 Extended Signal Peptide of Type V secretion system WU28_RS06220 PF05594 Haemagluttinin repeat WU28_RS06245 PF00596 Class II Aldolase and Adducin N-terminal domain WU28_RS06250 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS06255 PF01242 6-pyruvoyl tetrahydropterin synthase WU28_RS06265 PF00472 RF-1 domain WU28_RS06285 PF00701 Dihydrodipicolinate synthetase family WU28_RS06290 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS06315 PF14537 Cytochrome c3 WU28_RS06315 PF00890 FAD binding domain WU28_RS06320 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS06335 PF01266 FAD dependent oxidoreductase WU28_RS06335 PF16901 C-terminal domain of alpha-glycerophosphate oxidase WU28_RS06340 PF08220 DeoR-like helix-turn-helix domain WU28_RS06340 PF00455 DeoR C terminal sensor domain WU28_RS06345 PF00005 ABC transporter WU28_RS06345 PF17912 MalK OB fold domain WU28_RS06350 PF00005 ABC transporter WU28_RS06350 PF17912 MalK OB fold domain WU28_RS06360 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS06385 PF01037 Lrp/AsnC ligand binding domain WU28_RS06390 PF01266 FAD dependent oxidoreductase WU28_RS06395 PF12320 Type 5 capsule protein repressor C-terminal domain WU28_RS06395 PF00149 Calcineurin-like phosphoesterase WU28_RS06435 PF00478 IMP dehydrogenase / GMP reductase domain WU28_RS06435 PF00571 CBS domain WU28_RS06440 PF02540 NAD synthase WU28_RS06440 PF00117 Glutamine amidotransferase class-I WU28_RS06440 PF00958 GMP synthase C terminal domain WU28_RS06455 PF07804 HipA-like C-terminal domain WU28_RS06455 PF13657 HipA N-terminal domain WU28_RS06465 PF07690 Major Facilitator Superfamily WU28_RS06480 PF01979 Amidohydrolase family WU28_RS06490 PF00005 ABC transporter WU28_RS06495 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS06520 PF01965 DJ-1/PfpI family WU28_RS06530 PF00916 Sulfate permease family WU28_RS06530 PF01740 STAS domain WU28_RS06535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WU28_RS06535 PF00753 Metallo-beta-lactamase superfamily WU28_RS06535 PF10996 Beta-Casp domain WU28_RS06555 PF12706 Beta-lactamase superfamily domain WU28_RS06560 PF12833 Helix-turn-helix domain WU28_RS06560 PF01965 DJ-1/PfpI family WU28_RS06565 PF03466 LysR substrate binding domain WU28_RS06565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS06580 PF00107 Zinc-binding dehydrogenase WU28_RS06580 PF08240 Alcohol dehydrogenase GroES-like domain WU28_RS06585 PF07690 Major Facilitator Superfamily WU28_RS06590 PF00392 Bacterial regulatory proteins, gntR family WU28_RS06590 PF00155 Aminotransferase class I and II WU28_RS06600 PF01810 LysE type translocator WU28_RS06615 PF07687 Peptidase dimerisation domain WU28_RS06615 PF01546 Peptidase family M20/M25/M40 WU28_RS06620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS06625 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS06630 PF12911 N-terminal TM domain of oligopeptide transport permease C WU28_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS06635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS06635 PF00005 ABC transporter WU28_RS06640 PF00356 Bacterial regulatory proteins, lacI family WU28_RS06670 PF09335 SNARE associated Golgi protein WU28_RS06685 PF13847 Methyltransferase domain WU28_RS06700 PF00392 Bacterial regulatory proteins, gntR family WU28_RS06700 PF00155 Aminotransferase class I and II WU28_RS06710 PF00692 dUTPase WU28_RS06725 PF01632 Ribosomal protein L35 WU28_RS06730 PF00453 Ribosomal protein L20 WU28_RS06735 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WU28_RS06735 PF01409 tRNA synthetases class II core domain (F) WU28_RS06740 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WU28_RS06740 PF03484 tRNA synthetase B5 domain WU28_RS06740 PF03147 Ferredoxin-fold anticodon binding domain WU28_RS06740 PF01588 Putative tRNA binding domain WU28_RS06740 PF03483 B3/4 domain WU28_RS06745 PF00216 Bacterial DNA-binding protein WU28_RS06795 PF04231 Endonuclease I WU28_RS06815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU28_RS06815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU28_RS06820 PF04381 Putative exonuclease, RdgC WU28_RS06830 PF02515 CoA-transferase family III WU28_RS06835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS06835 PF03466 LysR substrate binding domain WU28_RS06855 PF00106 short chain dehydrogenase WU28_RS06865 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS06870 PF00005 ABC transporter WU28_RS06870 PF08402 TOBE domain WU28_RS06875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU28_RS06875 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS06875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU28_RS06880 PF00083 Sugar (and other) transporter WU28_RS06880 PF08946 Osmosensory transporter coiled coil WU28_RS06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS06885 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS06890 PF00486 Transcriptional regulatory protein, C terminal WU28_RS06890 PF00072 Response regulator receiver domain WU28_RS06895 PF00154 recA bacterial DNA recombination protein WU28_RS06900 PF02631 RecX family WU28_RS06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS06905 PF03466 LysR substrate binding domain WU28_RS06910 PF08267 Cobalamin-independent synthase, N-terminal domain WU28_RS06910 PF01717 Cobalamin-independent synthase, Catalytic domain WU28_RS06920 PF08442 ATP-grasp domain WU28_RS06920 PF00549 CoA-ligase WU28_RS06925 PF00549 CoA-ligase WU28_RS06925 PF02629 CoA binding domain WU28_RS06930 PF03741 Integral membrane protein TerC family WU28_RS06935 PF03741 Integral membrane protein TerC family WU28_RS06940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WU28_RS06940 PF03900 Porphobilinogen deaminase, C-terminal domain WU28_RS06960 PF00719 Inorganic pyrophosphatase WU28_RS06965 PF01557 Fumarylacetoacetate (FAA) hydrolase family WU28_RS07000 PF13629 Pilus formation protein N terminal region WU28_RS07000 PF00263 Bacterial type II and III secretion system protein WU28_RS07000 PF04972 BON domain WU28_RS07005 PF00437 Type II/IV secretion system protein WU28_RS07025 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS07030 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WU28_RS07030 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WU28_RS07035 PF02615 Malate/L-lactate dehydrogenase WU28_RS07040 PF03466 LysR substrate binding domain WU28_RS07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS07050 PF01266 FAD dependent oxidoreductase WU28_RS07055 PF04267 Sarcosine oxidase, delta subunit family WU28_RS07060 PF01571 Aminomethyltransferase folate-binding domain WU28_RS07060 PF08669 Glycine cleavage T-protein C-terminal barrel domain WU28_RS07060 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS07060 PF17806 Sarcosine oxidase A3 domain WU28_RS07070 PF00551 Formyl transferase WU28_RS07075 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS07085 PF00561 alpha/beta hydrolase fold WU28_RS07095 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WU28_RS07095 PF01565 FAD binding domain WU28_RS07100 PF01113 Dihydrodipicolinate reductase, N-terminus WU28_RS07100 PF05173 Dihydrodipicolinate reductase, C-terminus WU28_RS07105 PF04355 SmpA / OmlA family WU28_RS07110 PF01475 Ferric uptake regulator family WU28_RS07115 PF02463 RecF/RecN/SMC N terminal domain WU28_RS07120 PF01513 ATP-NAD kinase WU28_RS07125 PF01628 HrcA protein C terminal domain WU28_RS07125 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding WU28_RS07130 PF00762 Ferrochelatase WU28_RS07140 PF01025 GrpE WU28_RS07150 PF00012 Hsp70 protein WU28_RS07155 PF00226 DnaJ domain WU28_RS07155 PF00684 DnaJ central domain WU28_RS07155 PF01556 DnaJ C terminal domain WU28_RS07160 PF00675 Insulinase (Peptidase family M16) WU28_RS07160 PF05193 Peptidase M16 inactive domain WU28_RS07180 PF01434 Peptidase family M41 WU28_RS07180 PF17862 AAA+ lid domain WU28_RS07180 PF00004 ATPase family associated with various cellular activities (AAA) WU28_RS07190 PF00034 Cytochrome c WU28_RS07205 PF00180 Isocitrate/isopropylmalate dehydrogenase WU28_RS07225 PF00072 Response regulator receiver domain WU28_RS07225 PF00486 Transcriptional regulatory protein, C terminal WU28_RS07235 PF02669 K+-transporting ATPase, c chain WU28_RS07245 PF03814 Potassium-transporting ATPase A subunit WU28_RS07260 PF00474 Sodium:solute symporter family WU28_RS07270 PF00893 Small Multidrug Resistance protein WU28_RS07275 PF01713 Smr domain WU28_RS07275 PF00488 MutS domain V WU28_RS07280 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS07285 PF01580 FtsK/SpoIIIE family WU28_RS07285 PF09397 Ftsk gamma domain WU28_RS07285 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WU28_RS07285 PF17854 FtsK alpha domain WU28_RS07290 PF03548 Outer membrane lipoprotein carrier protein LolA WU28_RS07295 PF00004 ATPase family associated with various cellular activities (AAA) WU28_RS07295 PF16193 AAA C-terminal domain WU28_RS07295 PF12002 MgsA AAA+ ATPase C terminal WU28_RS07300 PF02403 Seryl-tRNA synthetase N-terminal domain WU28_RS07300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU28_RS07325 PF00990 Diguanylate cyclase, GGDEF domain WU28_RS07325 PF17151 Periplasmic sensor domain WU28_RS07340 PF00593 TonB dependent receptor WU28_RS07340 PF07660 Secretin and TonB N terminus short domain WU28_RS07340 PF07715 TonB-dependent Receptor Plug Domain WU28_RS07345 PF07690 Major Facilitator Superfamily WU28_RS07365 PF04183 IucA / IucC family WU28_RS07365 PF06276 Ferric iron reductase FhuF-like transporter WU28_RS07375 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) WU28_RS07385 PF02254 TrkA-N domain WU28_RS07385 PF00999 Sodium/hydrogen exchanger family WU28_RS07390 PF00106 short chain dehydrogenase WU28_RS07400 PF03883 Peroxide stress protein YaaA WU28_RS07410 PF12805 FUSC-like inner membrane protein yccS WU28_RS07420 PF00990 Diguanylate cyclase, GGDEF domain WU28_RS07430 PF04055 Radical SAM superfamily WU28_RS07430 PF06969 HemN C-terminal domain WU28_RS07440 PF00196 Bacterial regulatory proteins, luxR family WU28_RS07445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU28_RS07445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WU28_RS07445 PF03129 Anticodon binding domain WU28_RS07445 PF02824 TGS domain WU28_RS07450 PF00707 Translation initiation factor IF-3, C-terminal domain WU28_RS07450 PF05198 Translation initiation factor IF-3, N-terminal domain WU28_RS07455 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WU28_RS07455 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WU28_RS07465 PF00381 PTS HPr component phosphorylation site WU28_RS07470 PF05524 PEP-utilising enzyme, N-terminal WU28_RS07470 PF00391 PEP-utilising enzyme, mobile domain WU28_RS07470 PF02896 PEP-utilising enzyme, TIM barrel domain WU28_RS07480 PF02566 OsmC-like protein WU28_RS07485 PF02423 Ornithine cyclodeaminase/mu-crystallin family WU28_RS07495 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS07505 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS07510 PF00005 ABC transporter WU28_RS07525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU28_RS07525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU28_RS07535 PF02293 AmiS/UreI family transporter WU28_RS07540 PF03069 Acetamidase/Formamidase family WU28_RS07555 PF01116 Fructose-bisphosphate aldolase class-II WU28_RS07565 PF01259 SAICAR synthetase WU28_RS07570 PF15723 Motility quorum-sensing regulator, toxin of MqsA WU28_RS07575 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA WU28_RS07585 PF02600 Disulfide bond formation protein DsbB WU28_RS07590 PF00731 AIR carboxylase WU28_RS07595 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WU28_RS07595 PF02222 ATP-grasp domain WU28_RS07600 PF03481 Putative GTP-binding controlling metal-binding WU28_RS07600 PF01300 Telomere recombination WU28_RS07605 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS07610 PF01614 Bacterial transcriptional regulator WU28_RS07610 PF09339 IclR helix-turn-helix domain WU28_RS07615 PF00491 Arginase family WU28_RS07620 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS07630 PF00005 ABC transporter WU28_RS07635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS07635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS07645 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS07645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS07645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS07650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS07650 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS07650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS07655 PF03466 LysR substrate binding domain WU28_RS07660 PF00589 Phage integrase family WU28_RS07660 PF02899 Phage integrase, N-terminal SAM-like domain WU28_RS07665 PF04073 Aminoacyl-tRNA editing domain WU28_RS07670 PF01174 SNO glutamine amidotransferase family WU28_RS07685 PF00768 D-alanyl-D-alanine carboxypeptidase WU28_RS07695 PF07690 Major Facilitator Superfamily WU28_RS07705 PF12705 PD-(D/E)XK nuclease superfamily WU28_RS07705 PF00580 UvrD/REP helicase N-terminal domain WU28_RS07705 PF13361 UvrD-like helicase C-terminal domain WU28_RS07720 PF12170 DNA polymerase III tau subunit V interacting with alpha WU28_RS07720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding WU28_RS07720 PF12169 DNA polymerase III subunits gamma and tau domain III WU28_RS07725 PF02575 YbaB/EbfC DNA-binding family WU28_RS07730 PF02132 RecR protein WU28_RS07730 PF13662 Toprim domain WU28_RS07750 PF04228 Putative neutral zinc metallopeptidase WU28_RS07755 PF01300 Telomere recombination WU28_RS07795 PF03358 NADPH-dependent FMN reductase WU28_RS07800 PF07311 Dodecin WU28_RS07805 PF05192 MutS domain III WU28_RS07805 PF05190 MutS family domain IV WU28_RS07805 PF01624 MutS domain I WU28_RS07805 PF05188 MutS domain II WU28_RS07805 PF00488 MutS domain V WU28_RS07810 PF08007 Cupin superfamily protein WU28_RS07815 PF16970 Type-1 fimbrial protein, A WU28_RS07820 PF06804 NlpB/DapX lipoprotein WU28_RS07825 PF00701 Dihydrodipicolinate synthetase family WU28_RS07830 PF17820 PDZ domain WU28_RS07830 PF02163 Peptidase family M50 WU28_RS07845 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS07850 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS07855 PF00005 ABC transporter WU28_RS07860 PF02824 TGS domain WU28_RS07860 PF04607 Region found in RelA / SpoT proteins WU28_RS07860 PF13291 ACT domain WU28_RS07865 PF01192 RNA polymerase Rpb6 WU28_RS07870 PF00625 Guanylate kinase WU28_RS07875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU28_RS07880 PF00034 Cytochrome c WU28_RS07890 PF00877 NlpC/P60 family WU28_RS07895 PF01048 Phosphorylase superfamily WU28_RS07895 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus WU28_RS07915 PF03755 YicC-like family, N-terminal region WU28_RS07915 PF08340 Domain of unknown function (DUF1732) WU28_RS07920 PF03725 3' exoribonuclease family, domain 2 WU28_RS07920 PF01138 3' exoribonuclease family, domain 1 WU28_RS07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS07930 PF03466 LysR substrate binding domain WU28_RS07935 PF00672 HAMP domain WU28_RS07935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU28_RS07935 PF02203 Tar ligand binding domain homologue WU28_RS07940 PF00563 EAL domain WU28_RS07940 PF17154 Gammaproteobacterial periplasmic sensor domain WU28_RS07940 PF00990 Diguanylate cyclase, GGDEF domain WU28_RS07940 PF00672 HAMP domain WU28_RS07945 PF01725 Ham1 family WU28_RS07955 PF04055 Radical SAM superfamily WU28_RS07955 PF06969 HemN C-terminal domain WU28_RS07960 PF03951 Glutamine synthetase, beta-Grasp domain WU28_RS07960 PF00120 Glutamine synthetase, catalytic domain WU28_RS07965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS07965 PF00989 PAS fold WU28_RS07965 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS07970 PF00072 Response regulator receiver domain WU28_RS07970 PF00158 Sigma-54 interaction domain WU28_RS07970 PF02954 Bacterial regulatory protein, Fis family WU28_RS07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS07975 PF03466 LysR substrate binding domain WU28_RS07980 PF17954 Quercetinase C-terminal cupin domain WU28_RS07980 PF02678 Pirin WU28_RS07985 PF02678 Pirin WU28_RS07985 PF05726 Pirin C-terminal cupin domain WU28_RS07995 PF00005 ABC transporter WU28_RS07995 PF08402 TOBE domain WU28_RS08000 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS08010 PF00970 Oxidoreductase FAD-binding domain WU28_RS08010 PF00175 Oxidoreductase NAD-binding domain WU28_RS08015 PF03466 LysR substrate binding domain WU28_RS08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS08025 PF00248 Aldo/keto reductase family WU28_RS08035 PF01042 Endoribonuclease L-PSP WU28_RS08040 PF17191 RecG wedge domain WU28_RS08040 PF00271 Helicase conserved C-terminal domain WU28_RS08040 PF00270 DEAD/DEAH box helicase WU28_RS08045 PF03466 LysR substrate binding domain WU28_RS08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS08050 PF03466 LysR substrate binding domain WU28_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS08055 PF00171 Aldehyde dehydrogenase family WU28_RS08060 PF00210 Ferritin-like domain WU28_RS08080 PF00535 Glycosyl transferase family 2 WU28_RS08090 PF00005 ABC transporter WU28_RS08100 PF00534 Glycosyl transferases group 1 WU28_RS08110 PF02563 Polysaccharide biosynthesis/export protein WU28_RS08115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU28_RS08115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU28_RS08115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU28_RS08120 PF01370 NAD dependent epimerase/dehydratase family WU28_RS08125 PF05159 Capsule polysaccharide biosynthesis protein WU28_RS08130 PF05159 Capsule polysaccharide biosynthesis protein WU28_RS08140 PF00106 short chain dehydrogenase WU28_RS08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS08155 PF14759 Reductase C-terminal WU28_RS08165 PF00005 ABC transporter WU28_RS08170 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS08170 PF00005 ABC transporter WU28_RS08175 PF11862 Domain of unknown function (DUF3382) WU28_RS08175 PF02653 Branched-chain amino acid transport system / permease component WU28_RS08185 PF03741 Integral membrane protein TerC family WU28_RS08195 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS08210 PF07726 ATPase family associated with various cellular activities (AAA) WU28_RS08210 PF17863 AAA lid domain WU28_RS08245 PF00884 Sulfatase WU28_RS08270 PF00072 Response regulator receiver domain WU28_RS08270 PF00196 Bacterial regulatory proteins, luxR family WU28_RS08275 PF03797 Autotransporter beta-domain WU28_RS08275 PF12951 Passenger-associated-transport-repeat WU28_RS08275 PF00082 Subtilase family WU28_RS08280 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA WU28_RS08285 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system WU28_RS08290 PF00043 Glutathione S-transferase, C-terminal domain WU28_RS08290 PF02798 Glutathione S-transferase, N-terminal domain WU28_RS08295 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WU28_RS08300 PF03466 LysR substrate binding domain WU28_RS08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS08305 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS08315 PF01070 FMN-dependent dehydrogenase WU28_RS08320 PF01557 Fumarylacetoacetate (FAA) hydrolase family WU28_RS08335 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS08340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS08340 PF03466 LysR substrate binding domain WU28_RS08345 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS08370 PF03358 NADPH-dependent FMN reductase WU28_RS08390 PF07969 Amidohydrolase family WU28_RS08395 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS08405 PF03466 LysR substrate binding domain WU28_RS08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS08420 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS08425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WU28_RS08425 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter WU28_RS08425 PF13244 Domain of unknown function (DUF4040) WU28_RS08425 PF00361 Proton-conducting membrane transporter WU28_RS08430 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WU28_RS08435 PF00361 Proton-conducting membrane transporter WU28_RS08440 PF01899 Na+/H+ ion antiporter subunit WU28_RS08445 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) WU28_RS08470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WU28_RS08475 PF02016 LD-carboxypeptidase N-terminal domain WU28_RS08475 PF17676 LD-carboxypeptidase C-terminal domain WU28_RS08480 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS08485 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS08495 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS08500 PF12848 ABC transporter WU28_RS08500 PF00005 ABC transporter WU28_RS08505 PF00005 ABC transporter WU28_RS08540 PF00970 Oxidoreductase FAD-binding domain WU28_RS08540 PF00042 Globin WU28_RS08540 PF00175 Oxidoreductase NAD-binding domain WU28_RS08545 PF02082 Transcriptional regulator WU28_RS08550 PF01266 FAD dependent oxidoreductase WU28_RS08565 PF01571 Aminomethyltransferase folate-binding domain WU28_RS08570 PF02618 YceG-like family WU28_RS08575 PF02223 Thymidylate kinase WU28_RS08580 PF12169 DNA polymerase III subunits gamma and tau domain III WU28_RS08585 PF01026 TatD related DNase WU28_RS08600 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS08610 PF00005 ABC transporter WU28_RS08615 PF00491 Arginase family WU28_RS08620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WU28_RS08620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WU28_RS08625 PF00171 Aldehyde dehydrogenase family WU28_RS08630 PF07687 Peptidase dimerisation domain WU28_RS08630 PF01546 Peptidase family M20/M25/M40 WU28_RS08635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS08635 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS08635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS08645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS08645 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU28_RS08655 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU28_RS08655 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS08660 PF00392 Bacterial regulatory proteins, gntR family WU28_RS08660 PF07729 FCD domain WU28_RS08670 PF04343 Protein of unknown function, DUF488 WU28_RS08675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU28_RS08695 PF01425 Amidase WU28_RS08700 PF07286 Protein of unknown function (DUF1445) WU28_RS08710 PF01627 Hpt domain WU28_RS08710 PF00989 PAS fold WU28_RS08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS08710 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS08710 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS08710 PF00072 Response regulator receiver domain WU28_RS08715 PF00072 Response regulator receiver domain WU28_RS08715 PF00196 Bacterial regulatory proteins, luxR family WU28_RS08720 PF13018 Extended Signal Peptide of Type V secretion system WU28_RS08720 PF05594 Haemagluttinin repeat WU28_RS08720 PF13332 Hemagglutinin repeat WU28_RS08720 PF05860 haemagglutination activity domain WU28_RS08725 PF16970 Type-1 fimbrial protein, A WU28_RS08730 PF02753 Pili assembly chaperone PapD, C-terminal domain WU28_RS08730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain WU28_RS08735 PF00577 Outer membrane usher protein WU28_RS08735 PF13954 PapC N-terminal domain WU28_RS08735 PF13953 PapC C-terminal domain WU28_RS08740 PF00419 Fimbrial protein WU28_RS08745 PF08479 POTRA domain, ShlB-type WU28_RS08745 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB WU28_RS08745 PF17287 POTRA domain WU28_RS08760 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS08785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS08785 PF03466 LysR substrate binding domain WU28_RS08795 PF05378 Hydantoinase/oxoprolinase N-terminal region WU28_RS08795 PF01968 Hydantoinase/oxoprolinase WU28_RS08810 PF05552 Conserved TM helix WU28_RS08810 PF00924 Mechanosensitive ion channel WU28_RS08820 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS08825 PF00588 SpoU rRNA Methylase family WU28_RS08830 PF00459 Inositol monophosphatase family WU28_RS08835 PF03741 Integral membrane protein TerC family WU28_RS08835 PF03471 Transporter associated domain WU28_RS08840 PF02673 Bacitracin resistance protein BacA WU28_RS08845 PF00149 Calcineurin-like phosphoesterase WU28_RS08850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WU28_RS08860 PF01406 tRNA synthetases class I (C) catalytic domain WU28_RS08860 PF09190 DALR domain WU28_RS08865 PF00730 HhH-GPD superfamily base excision DNA repair protein WU28_RS08865 PF06029 AlkA N-terminal domain WU28_RS08865 PF02805 Metal binding domain of Ada WU28_RS08865 PF12833 Helix-turn-helix domain WU28_RS08870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit WU28_RS08880 PF09179 TilS substrate binding domain WU28_RS08880 PF01171 PP-loop family WU28_RS08885 PF13840 ACT domain WU28_RS08885 PF01842 ACT domain WU28_RS08885 PF00696 Amino acid kinase family WU28_RS08910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU28_RS08910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU28_RS08915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS08915 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU28_RS08920 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS08925 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS08930 PF00561 alpha/beta hydrolase fold WU28_RS08935 PF01958 Domain of unknown function DUF108 WU28_RS08935 PF03447 Homoserine dehydrogenase, NAD binding domain WU28_RS08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS08950 PF03466 LysR substrate binding domain WU28_RS08970 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS08975 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS08980 PF08402 TOBE domain WU28_RS08980 PF00005 ABC transporter WU28_RS08990 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS08990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WU28_RS08995 PF01614 Bacterial transcriptional regulator WU28_RS08995 PF09339 IclR helix-turn-helix domain WU28_RS09000 PF13380 CoA binding domain WU28_RS09005 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS09010 PF01042 Endoribonuclease L-PSP WU28_RS09035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WU28_RS09045 PF00535 Glycosyl transferase family 2 WU28_RS09050 PF14883 Hypothetical glycosyl hydrolase family 13 WU28_RS09050 PF01522 Polysaccharide deacetylase WU28_RS09070 PF12802 MarR family WU28_RS09075 PF00072 Response regulator receiver domain WU28_RS09075 PF00196 Bacterial regulatory proteins, luxR family WU28_RS09085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU28_RS09085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU28_RS09085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU28_RS09085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU28_RS09090 PF00342 Phosphoglucose isomerase WU28_RS09095 PF00132 Bacterial transferase hexapeptide (six repeats) WU28_RS09105 PF02146 Sir2 family WU28_RS09110 PF00459 Inositol monophosphatase family WU28_RS09115 PF00171 Aldehyde dehydrogenase family WU28_RS09120 PF00202 Aminotransferase class-III WU28_RS09125 PF00155 Aminotransferase class I and II WU28_RS09125 PF00392 Bacterial regulatory proteins, gntR family WU28_RS09135 PF13361 UvrD-like helicase C-terminal domain WU28_RS09135 PF00580 UvrD/REP helicase N-terminal domain WU28_RS09140 PF01544 CorA-like Mg2+ transporter protein WU28_RS09150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS09155 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS09160 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS09160 PF12911 N-terminal TM domain of oligopeptide transport permease C WU28_RS09165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS09165 PF00005 ABC transporter WU28_RS09170 PF01047 MarR family WU28_RS09185 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB WU28_RS09185 PF08479 POTRA domain, ShlB-type WU28_RS09190 PF00563 EAL domain WU28_RS09190 PF03707 Bacterial signalling protein N terminal repeat WU28_RS09190 PF00990 Diguanylate cyclase, GGDEF domain WU28_RS09220 PF04972 BON domain WU28_RS09220 PF00263 Bacterial type II and III secretion system protein WU28_RS09220 PF13629 Pilus formation protein N terminal region WU28_RS09230 PF00437 Type II/IV secretion system protein WU28_RS09260 PF00072 Response regulator receiver domain WU28_RS09260 PF02954 Bacterial regulatory protein, Fis family WU28_RS09260 PF00158 Sigma-54 interaction domain WU28_RS09275 PF08281 Sigma-70, region 4 WU28_RS09275 PF04542 Sigma-70 region 2 WU28_RS09285 PF00034 Cytochrome c WU28_RS09290 PF08207 Elongation factor P (EF-P) KOW-like domain WU28_RS09290 PF01132 Elongation factor P (EF-P) OB domain WU28_RS09290 PF09285 Elongation factor P, C-terminal WU28_RS09305 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase WU28_RS09310 PF00694 Aconitase C-terminal domain WU28_RS09310 PF00330 Aconitase family (aconitate hydratase) WU28_RS09320 PF00593 TonB dependent receptor WU28_RS09320 PF07715 TonB-dependent Receptor Plug Domain WU28_RS09335 PF00691 OmpA family WU28_RS09345 PF11791 Aconitate B N-terminal domain WU28_RS09345 PF06434 Aconitate hydratase 2 N-terminus WU28_RS09345 PF00330 Aconitase family (aconitate hydratase) WU28_RS09370 PF00892 EamA-like transporter family WU28_RS09375 PF01925 Sulfite exporter TauE/SafE WU28_RS09395 PF03466 LysR substrate binding domain WU28_RS09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS09400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain WU28_RS09400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain WU28_RS09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS09410 PF03466 LysR substrate binding domain WU28_RS09455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU28_RS09455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU28_RS09460 PF01425 Amidase WU28_RS09470 PF00171 Aldehyde dehydrogenase family WU28_RS09485 PF13603 Leucyl-tRNA synthetase, Domain 2 WU28_RS09485 PF08264 Anticodon-binding domain of tRNA WU28_RS09485 PF00133 tRNA synthetases class I (I, L, M and V) WU28_RS09485 PF09334 tRNA synthetases class I (M) WU28_RS09490 PF07690 Major Facilitator Superfamily WU28_RS09495 PF01047 MarR family WU28_RS09515 PF01740 STAS domain WU28_RS09515 PF00916 Sulfate permease family WU28_RS09520 PF00471 Ribosomal protein L33 WU28_RS09525 PF00830 Ribosomal L28 family WU28_RS09530 PF07690 Major Facilitator Superfamily WU28_RS09550 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS09555 PF00005 ABC transporter WU28_RS09555 PF00571 CBS domain WU28_RS09560 PF01361 Tautomerase enzyme WU28_RS09565 PF02803 Thiolase, C-terminal domain WU28_RS09565 PF00108 Thiolase, N-terminal domain WU28_RS09575 PF00392 Bacterial regulatory proteins, gntR family WU28_RS09575 PF07729 FCD domain WU28_RS09585 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS09590 PF13193 AMP-binding enzyme C-terminal domain WU28_RS09590 PF00501 AMP-binding enzyme WU28_RS09595 PF13193 AMP-binding enzyme C-terminal domain WU28_RS09595 PF00501 AMP-binding enzyme WU28_RS09600 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS09605 PF00080 Copper/zinc superoxide dismutase (SODC) WU28_RS09620 PF00005 ABC transporter WU28_RS09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS09625 PF03459 TOBE domain WU28_RS09645 PF00529 HlyD membrane-fusion protein of T1SS WU28_RS09645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU28_RS09650 PF00873 AcrB/AcrD/AcrF family WU28_RS09655 PF08139 Prokaryotic membrane lipoprotein lipid attachment site WU28_RS09655 PF02321 Outer membrane efflux protein WU28_RS09660 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WU28_RS09665 PF01648 4'-phosphopantetheinyl transferase superfamily WU28_RS09670 PF00933 Glycosyl hydrolase family 3 N terminal domain WU28_RS09675 PF01541 GIY-YIG catalytic domain WU28_RS09675 PF08459 UvrC Helix-hairpin-helix N-terminal WU28_RS09675 PF02151 UvrB/uvrC motif WU28_RS09680 PF01066 CDP-alcohol phosphatidyltransferase WU28_RS09695 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term WU28_RS09695 PF14489 QueF-like protein WU28_RS09700 PF00463 Isocitrate lyase family WU28_RS09715 PF11862 Domain of unknown function (DUF3382) WU28_RS09715 PF02653 Branched-chain amino acid transport system / permease component WU28_RS09720 PF02653 Branched-chain amino acid transport system / permease component WU28_RS09725 PF13458 Periplasmic binding protein WU28_RS09730 PF00355 Rieske [2Fe-2S] domain WU28_RS09730 PF00848 Ring hydroxylating alpha subunit (catalytic domain) WU28_RS09735 PF00866 Ring hydroxylating beta subunit WU28_RS09740 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS09750 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS09755 PF02515 CoA-transferase family III WU28_RS09760 PF07859 alpha/beta hydrolase fold WU28_RS09765 PF14535 AMP-binding enzyme C-terminal domain WU28_RS09765 PF00501 AMP-binding enzyme WU28_RS09770 PF00108 Thiolase, N-terminal domain WU28_RS09770 PF02803 Thiolase, C-terminal domain WU28_RS09790 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS09815 PF01152 Bacterial-like globin WU28_RS09860 PF01522 Polysaccharide deacetylase WU28_RS09865 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS09895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU28_RS09895 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS09920 PF03466 LysR substrate binding domain WU28_RS09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS09930 PF01799 [2Fe-2S] binding domain WU28_RS09930 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS09935 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase WU28_RS09945 PF06719 AraC-type transcriptional regulator N-terminus WU28_RS09945 PF12833 Helix-turn-helix domain WU28_RS09965 PF07690 Major Facilitator Superfamily WU28_RS09980 PF00583 Acetyltransferase (GNAT) family WU28_RS09990 PF00005 ABC transporter WU28_RS09990 PF00664 ABC transporter transmembrane region WU28_RS10000 PF02535 ZIP Zinc transporter WU28_RS10015 PF01740 STAS domain WU28_RS10015 PF00916 Sulfate permease family WU28_RS10035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WU28_RS10035 PF03625 Domain of unknown function DUF302 WU28_RS10045 PF02805 Metal binding domain of Ada WU28_RS10045 PF12833 Helix-turn-helix domain WU28_RS10050 PF07237 Protein of unknown function (DUF1428) WU28_RS10055 PF02567 Phenazine biosynthesis-like protein WU28_RS10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS10060 PF03466 LysR substrate binding domain WU28_RS10065 PF04286 Protein of unknown function (DUF445) WU28_RS10080 PF00171 Aldehyde dehydrogenase family WU28_RS10085 PF00158 Sigma-54 interaction domain WU28_RS10085 PF02954 Bacterial regulatory protein, Fis family WU28_RS10085 PF01590 GAF domain WU28_RS10105 PF03788 LrgA family WU28_RS10110 PF13649 Methyltransferase domain WU28_RS10120 PF00155 Aminotransferase class I and II WU28_RS10125 PF00202 Aminotransferase class-III WU28_RS10160 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP WU28_RS10160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WU28_RS10165 PF13746 4Fe-4S dicluster domain WU28_RS10165 PF12801 4Fe-4S binding domain WU28_RS10165 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase WU28_RS10190 PF00005 ABC transporter WU28_RS10195 PF01061 ABC-2 type transporter WU28_RS10200 PF01594 AI-2E family transporter WU28_RS10235 PF04539 Sigma-70 region 3 WU28_RS10235 PF04542 Sigma-70 region 2 WU28_RS10235 PF04545 Sigma-70, region 4 WU28_RS10235 PF00140 Sigma-70 factor, region 1.2 WU28_RS10235 PF03979 Sigma-70 factor, region 1.1 WU28_RS10235 PF04546 Sigma-70, non-essential region WU28_RS10240 PF08278 DNA primase DnaG DnaB-binding WU28_RS10240 PF01807 CHC2 zinc finger WU28_RS10240 PF08275 DNA primase catalytic core, N-terminal domain WU28_RS10240 PF10410 DnaB-helicase binding domain of primase WU28_RS10245 PF01165 Ribosomal protein S21 WU28_RS10250 PF00156 Phosphoribosyl transferase domain WU28_RS10255 PF00709 Adenylosuccinate synthetase WU28_RS10260 PF13393 Histidyl-tRNA synthetase WU28_RS10265 PF01145 SPFH domain / Band 7 family WU28_RS10270 PF12221 Bacterial membrane protein N terminal WU28_RS10270 PF01145 SPFH domain / Band 7 family WU28_RS10275 PF16360 GTP-binding GTPase Middle Region WU28_RS10275 PF13167 GTP-binding GTPase N-terminal WU28_RS10275 PF01926 50S ribosome-binding GTPase WU28_RS10280 PF17209 Hfq protein WU28_RS10285 PF00155 Aminotransferase class I and II WU28_RS10290 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WU28_RS10290 PF01926 50S ribosome-binding GTPase WU28_RS10295 PF13360 PQQ-like domain WU28_RS10300 PF09976 Tetratricopeptide repeat-like domain WU28_RS10305 PF13393 Histidyl-tRNA synthetase WU28_RS10305 PF03129 Anticodon binding domain WU28_RS10310 PF04551 GcpE protein WU28_RS10320 PF04055 Radical SAM superfamily WU28_RS10325 PF00334 Nucleoside diphosphate kinase WU28_RS10330 PF08264 Anticodon-binding domain of tRNA WU28_RS10330 PF00133 tRNA synthetases class I (I, L, M and V) WU28_RS10330 PF10458 Valyl tRNA synthetase tRNA binding arm WU28_RS10340 PF00072 Response regulator receiver domain WU28_RS10340 PF00486 Transcriptional regulatory protein, C terminal WU28_RS10345 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS10345 PF08521 Two-component sensor kinase N-terminal WU28_RS10365 PF00266 Aminotransferase class-V WU28_RS10370 PF01746 tRNA (Guanine-1)-methyltransferase WU28_RS10375 PF01782 RimM N-terminal domain WU28_RS10380 PF00886 Ribosomal protein S16 WU28_RS10390 PF01206 Sulfurtransferase TusA WU28_RS10395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WU28_RS10395 PF01411 tRNA synthetases class II (A) WU28_RS10395 PF02272 DHHA1 domain WU28_RS10440 PF01425 Amidase WU28_RS10445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS10445 PF00005 ABC transporter WU28_RS10450 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS10455 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS10460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS10480 PF03466 LysR substrate binding domain WU28_RS10480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS10485 PF13416 Bacterial extracellular solute-binding protein WU28_RS10490 PF01266 FAD dependent oxidoreductase WU28_RS10495 PF00175 Oxidoreductase NAD-binding domain WU28_RS10495 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS10495 PF00970 Oxidoreductase FAD-binding domain WU28_RS10500 PF02261 Aspartate decarboxylase WU28_RS10515 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WU28_RS10520 PF07005 Sugar-binding N-terminal domain WU28_RS10520 PF17042 Nucleotide-binding C-terminal domain WU28_RS10525 PF03812 2-keto-3-deoxygluconate permease WU28_RS10535 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS10545 PF02142 MGS-like domain WU28_RS10550 PF04384 Iron-sulphur cluster assembly WU28_RS10555 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS10560 PF00012 Hsp70 protein WU28_RS10565 PF07743 HSCB C-terminal oligomerisation domain WU28_RS10570 PF01521 Iron-sulphur cluster biosynthesis WU28_RS10575 PF01592 NifU-like N terminal domain WU28_RS10580 PF00266 Aminotransferase class-V WU28_RS10585 PF02082 Transcriptional regulator WU28_RS10590 PF01451 Low molecular weight phosphotyrosine protein phosphatase WU28_RS10595 PF12344 Ultra-violet resistance protein B WU28_RS10595 PF02151 UvrB/uvrC motif WU28_RS10595 PF17757 UvrB interaction domain WU28_RS10595 PF04851 Type III restriction enzyme, res subunit WU28_RS10595 PF00271 Helicase conserved C-terminal domain WU28_RS10600 PF00155 Aminotransferase class I and II WU28_RS10605 PF01726 LexA DNA binding domain WU28_RS10605 PF00717 Peptidase S24-like WU28_RS10610 PF03212 Pertactin WU28_RS10610 PF03797 Autotransporter beta-domain WU28_RS10635 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS10640 PF01144 Coenzyme A transferase WU28_RS10645 PF01144 Coenzyme A transferase WU28_RS10655 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS10655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS10655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS10665 PF00108 Thiolase, N-terminal domain WU28_RS10665 PF02803 Thiolase, C-terminal domain WU28_RS10675 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS10680 PF01575 MaoC like domain WU28_RS10685 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS10690 PF02515 CoA-transferase family III WU28_RS10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS10695 PF03466 LysR substrate binding domain WU28_RS10700 PF00004 ATPase family associated with various cellular activities (AAA) WU28_RS10700 PF02190 ATP-dependent protease La (LON) substrate-binding domain WU28_RS10700 PF05362 Lon protease (S16) C-terminal proteolytic domain WU28_RS10705 PF07724 AAA domain (Cdc48 subfamily) WU28_RS10705 PF10431 C-terminal, D2-small domain, of ClpB protein WU28_RS10705 PF06689 ClpX C4-type zinc finger WU28_RS10710 PF00574 Clp protease WU28_RS10715 PF05697 Bacterial trigger factor protein (TF) WU28_RS10715 PF05698 Bacterial trigger factor protein (TF) C-terminus WU28_RS10715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WU28_RS10720 PF03350 Uncharacterized protein family, UPF0114 WU28_RS10735 PF00313 'Cold-shock' DNA-binding domain WU28_RS10770 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WU28_RS10770 PF14602 Hexapeptide repeat of succinyl-transferase WU28_RS10770 PF00132 Bacterial transferase hexapeptide (six repeats) WU28_RS10775 PF01546 Peptidase family M20/M25/M40 WU28_RS10775 PF07687 Peptidase dimerisation domain WU28_RS10780 PF05175 Methyltransferase small domain WU28_RS10785 PF00005 ABC transporter WU28_RS10785 PF12848 ABC transporter WU28_RS10790 PF07715 TonB-dependent Receptor Plug Domain WU28_RS10795 PF13361 UvrD-like helicase C-terminal domain WU28_RS10795 PF00580 UvrD/REP helicase N-terminal domain WU28_RS10815 PF00551 Formyl transferase WU28_RS10820 PF06574 FAD synthetase WU28_RS10820 PF01687 Riboflavin kinase WU28_RS10825 PF00133 tRNA synthetases class I (I, L, M and V) WU28_RS10825 PF08264 Anticodon-binding domain of tRNA WU28_RS10825 PF06827 Zinc finger found in FPG and IleRS WU28_RS10830 PF01252 Signal peptidase (SPase) II WU28_RS10835 PF02441 Flavoprotein WU28_RS10835 PF04127 DNA / pantothenate metabolism flavoprotein WU28_RS10845 PF01037 Lrp/AsnC ligand binding domain WU28_RS10865 PF13406 Transglycosylase SLT domain WU28_RS10870 PF04305 Protein of unknown function (DUF455) WU28_RS10890 PF02875 Mur ligase family, glutamate ligase domain WU28_RS10890 PF08245 Mur ligase middle domain WU28_RS10890 PF08443 RimK-like ATP-grasp domain WU28_RS10895 PF08245 Mur ligase middle domain WU28_RS10895 PF02875 Mur ligase family, glutamate ligase domain WU28_RS10895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU28_RS10900 PF05532 CsbD-like WU28_RS10910 PF04972 BON domain WU28_RS10920 PF00005 ABC transporter WU28_RS10925 PF13472 GDSL-like Lipase/Acylhydrolase family WU28_RS10930 PF13145 PPIC-type PPIASE domain WU28_RS10935 PF03009 Glycerophosphoryl diester phosphodiesterase family WU28_RS10940 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ WU28_RS10945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU28_RS10945 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS10950 PF00462 Glutaredoxin WU28_RS10950 PF08534 Redoxin WU28_RS10960 PF09278 MerR, DNA binding WU28_RS10960 PF00376 MerR family regulatory protein WU28_RS10965 PF05958 tRNA (Uracil-5-)-methyltransferase WU28_RS10985 PF01551 Peptidase family M23 WU28_RS10985 PF01476 LysM domain WU28_RS10995 PF01975 Survival protein SurE WU28_RS11000 PF02660 Glycerol-3-phosphate acyltransferase WU28_RS11010 PF00814 Glycoprotease family WU28_RS11015 PF00860 Permease family WU28_RS11025 PF00085 Thioredoxin WU28_RS11030 PF01205 Uncharacterized protein family UPF0029 WU28_RS11040 PF00583 Acetyltransferase (GNAT) family WU28_RS11045 PF12802 MarR family WU28_RS11055 PF00202 Aminotransferase class-III WU28_RS11060 PF16868 NMT1-like family WU28_RS11080 PF03797 Autotransporter beta-domain WU28_RS11090 PF13091 PLD-like domain WU28_RS11090 PF13396 Phospholipase_D-nuclease N-terminal WU28_RS11095 PF01740 STAS domain WU28_RS11100 PF13581 Histidine kinase-like ATPase domain WU28_RS11105 PF00842 Alanine racemase, C-terminal domain WU28_RS11105 PF01168 Alanine racemase, N-terminal domain WU28_RS11115 PF00672 HAMP domain WU28_RS11115 PF07228 Stage II sporulation protein E (SpoIIE) WU28_RS11140 PF04542 Sigma-70 region 2 WU28_RS11140 PF08281 Sigma-70, region 4 WU28_RS11145 PF03958 Bacterial type II/III secretion system short domain WU28_RS11145 PF00263 Bacterial type II and III secretion system protein WU28_RS11155 PF01312 FlhB HrpN YscU SpaS Family WU28_RS11160 PF01311 Bacterial export proteins, family 1 WU28_RS11165 PF01313 Bacterial export proteins, family 3 WU28_RS11170 PF00813 FliP family WU28_RS11175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU28_RS11190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU28_RS11190 PF02874 ATP synthase alpha/beta family, beta-barrel domain WU28_RS11190 PF18269 T3SS EscN ATPase C-terminal domain WU28_RS11195 PF02108 Flagellar assembly protein FliH WU28_RS11205 PF01514 Secretory protein of YscJ/FliF family WU28_RS11270 PF00771 FHIPEP family WU28_RS11300 PF03449 Transcription elongation factor, N-terminal WU28_RS11300 PF01272 Transcription elongation factor, GreA/GreB, C-term WU28_RS11305 PF00672 HAMP domain WU28_RS11305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU28_RS11305 PF02203 Tar ligand binding domain homologue WU28_RS11310 PF00860 Permease family WU28_RS11335 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS11345 PF13419 Haloacid dehalogenase-like hydrolase WU28_RS11350 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS11355 PF00005 ABC transporter WU28_RS11355 PF08402 TOBE domain WU28_RS11360 PF03466 LysR substrate binding domain WU28_RS11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS11370 PF00581 Rhodanese-like domain WU28_RS11380 PF01435 Peptidase family M48 WU28_RS11385 PF08240 Alcohol dehydrogenase GroES-like domain WU28_RS11385 PF00107 Zinc-binding dehydrogenase WU28_RS11390 PF00892 EamA-like transporter family WU28_RS11400 PF01047 MarR family WU28_RS11410 PF00529 HlyD membrane-fusion protein of T1SS WU28_RS11410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU28_RS11415 PF07690 Major Facilitator Superfamily WU28_RS11420 PF00180 Isocitrate/isopropylmalate dehydrogenase WU28_RS11425 PF00392 Bacterial regulatory proteins, gntR family WU28_RS11425 PF00155 Aminotransferase class I and II WU28_RS11430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS11435 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS11440 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS11440 PF12911 N-terminal TM domain of oligopeptide transport permease C WU28_RS11445 PF00005 ABC transporter WU28_RS11445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS11455 PF00202 Aminotransferase class-III WU28_RS11460 PF07883 Cupin domain WU28_RS11465 PF00850 Histone deacetylase domain WU28_RS11470 PF01546 Peptidase family M20/M25/M40 WU28_RS11470 PF07687 Peptidase dimerisation domain WU28_RS11480 PF00171 Aldehyde dehydrogenase family WU28_RS11485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU28_RS11490 PF00202 Aminotransferase class-III WU28_RS11495 PF01235 Sodium:alanine symporter family WU28_RS11500 PF05872 Bacterial protein of unknown function (DUF853) WU28_RS11505 PF01709 Transcriptional regulator WU28_RS11510 PF02844 Phosphoribosylglycinamide synthetase, N domain WU28_RS11510 PF02843 Phosphoribosylglycinamide synthetase, C domain WU28_RS11510 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WU28_RS11515 PF01218 Coproporphyrinogen III oxidase WU28_RS11520 PF01467 Cytidylyltransferase-like WU28_RS11530 PF02590 Predicted SPOUT methyltransferase WU28_RS11535 PF02545 Maf-like protein WU28_RS11540 PF03797 Autotransporter beta-domain WU28_RS11540 PF03212 Pertactin WU28_RS11580 PF10150 Ribonuclease E/G family WU28_RS11580 PF00575 S1 RNA binding domain WU28_RS11585 PF01842 ACT domain WU28_RS11585 PF00800 Prephenate dehydratase WU28_RS11595 PF07690 Major Facilitator Superfamily WU28_RS11600 PF00664 ABC transporter transmembrane region WU28_RS11600 PF00005 ABC transporter WU28_RS11605 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WU28_RS11615 PF03692 Putative zinc- or iron-chelating domain WU28_RS11630 PF00884 Sulfatase WU28_RS11635 PF13439 Glycosyltransferase Family 4 WU28_RS11635 PF00534 Glycosyl transferases group 1 WU28_RS11640 PF00535 Glycosyl transferase family 2 WU28_RS11645 PF01522 Polysaccharide deacetylase WU28_RS11650 PF00534 Glycosyl transferases group 1 WU28_RS11650 PF13439 Glycosyltransferase Family 4 WU28_RS11655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WU28_RS11655 PF07733 Bacterial DNA polymerase III alpha NTPase domain WU28_RS11655 PF14579 Helix-hairpin-helix motif WU28_RS11655 PF02811 PHP domain WU28_RS11655 PF01336 OB-fold nucleic acid binding domain WU28_RS11665 PF00271 Helicase conserved C-terminal domain WU28_RS11665 PF00270 DEAD/DEAH box helicase WU28_RS11665 PF11898 Domain of unknown function (DUF3418) WU28_RS11665 PF04408 Helicase associated domain (HA2) WU28_RS11665 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold WU28_RS11670 PF00696 Amino acid kinase family WU28_RS11670 PF00583 Acetyltransferase (GNAT) family WU28_RS11675 PF04362 Bacterial Fe(2+) trafficking WU28_RS11680 PF04185 Phosphoesterase family WU28_RS11680 PF05506 Domain of unknown function (DUF756) WU28_RS11685 PF01895 PhoU domain WU28_RS11690 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WU28_RS11695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS11695 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS11695 PF18158 Adaptive response protein AidB N-terminal domain WU28_RS11700 PF02646 RmuC family WU28_RS11710 PF02245 Methylpurine-DNA glycosylase (MPG) WU28_RS11720 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS11725 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS11730 PF08402 TOBE domain WU28_RS11730 PF00005 ABC transporter WU28_RS11735 PF13416 Bacterial extracellular solute-binding protein WU28_RS11755 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS11765 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS11765 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component WU28_RS11785 PF00285 Citrate synthase, C-terminal domain WU28_RS11790 PF03937 Flavinator of succinate dehydrogenase WU28_RS11795 PF13085 2Fe-2S iron-sulfur cluster binding domain WU28_RS11800 PF02910 Fumarate reductase flavoprotein C-term WU28_RS11800 PF00890 FAD binding domain WU28_RS11805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WU28_RS11810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WU28_RS11815 PF00392 Bacterial regulatory proteins, gntR family WU28_RS11815 PF07702 UTRA domain WU28_RS11820 PF00056 lactate/malate dehydrogenase, NAD binding domain WU28_RS11820 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WU28_RS11830 PF00285 Citrate synthase, C-terminal domain WU28_RS11835 PF00330 Aconitase family (aconitate hydratase) WU28_RS11835 PF00694 Aconitase C-terminal domain WU28_RS11840 PF04303 PrpF protein WU28_RS11845 PF03972 MmgE/PrpD family WU28_RS11850 PF03653 Uncharacterised protein family (UPF0093) WU28_RS11855 PF02926 THUMP domain WU28_RS11855 PF01170 Putative RNA methylase family UPF0020 WU28_RS11875 PF16177 Acetyl-coenzyme A synthetase N-terminus WU28_RS11875 PF13193 AMP-binding enzyme C-terminal domain WU28_RS11875 PF00501 AMP-binding enzyme WU28_RS11885 PF01430 Hsp33 protein WU28_RS11910 PF00211 Adenylate and Guanylate cyclase catalytic domain WU28_RS11915 PF04977 Septum formation initiator WU28_RS11920 PF00113 Enolase, C-terminal TIM barrel domain WU28_RS11920 PF03952 Enolase, N-terminal domain WU28_RS11930 PF00793 DAHP synthetase I family WU28_RS11935 PF06418 CTP synthase N-terminus WU28_RS11935 PF00117 Glutamine amidotransferase class-I WU28_RS11945 PF01321 Creatinase/Prolidase N-terminal domain WU28_RS11945 PF00557 Metallopeptidase family M24 WU28_RS11955 PF03576 Peptidase family S58 WU28_RS11960 PF12911 N-terminal TM domain of oligopeptide transport permease C WU28_RS11960 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS11965 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS11970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS11975 PF00005 ABC transporter WU28_RS11975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS11980 PF01112 Asparaginase WU28_RS11990 PF01144 Coenzyme A transferase WU28_RS12010 PF16363 GDP-mannose 4,6 dehydratase WU28_RS12025 PF01212 Beta-eliminating lyase WU28_RS12030 PF00892 EamA-like transporter family WU28_RS12035 PF13193 AMP-binding enzyme C-terminal domain WU28_RS12035 PF16177 Acetyl-coenzyme A synthetase N-terminus WU28_RS12035 PF00501 AMP-binding enzyme WU28_RS12045 PF03928 Haem-degrading WU28_RS12050 PF00501 AMP-binding enzyme WU28_RS12050 PF16177 Acetyl-coenzyme A synthetase N-terminus WU28_RS12050 PF13193 AMP-binding enzyme C-terminal domain WU28_RS12055 PF16177 Acetyl-coenzyme A synthetase N-terminus WU28_RS12055 PF13193 AMP-binding enzyme C-terminal domain WU28_RS12055 PF00501 AMP-binding enzyme WU28_RS12060 PF00877 NlpC/P60 family WU28_RS12075 PF03466 LysR substrate binding domain WU28_RS12075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS12080 PF00171 Aldehyde dehydrogenase family WU28_RS12090 PF03466 LysR substrate binding domain WU28_RS12090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS12100 PF02789 Cytosol aminopeptidase family, N-terminal domain WU28_RS12100 PF00883 Cytosol aminopeptidase family, catalytic domain WU28_RS12105 PF04364 DNA polymerase III chi subunit, HolC WU28_RS12115 PF01027 Inhibitor of apoptosis-promoting Bax1 WU28_RS12120 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS12130 PF00291 Pyridoxal-phosphate dependent enzyme WU28_RS12140 PF11967 Recombination protein O N terminal WU28_RS12140 PF02565 Recombination protein O C terminal WU28_RS12145 PF07650 KH domain WU28_RS12145 PF01926 50S ribosome-binding GTPase WU28_RS12150 PF14622 Ribonuclease-III-like WU28_RS12150 PF00035 Double-stranded RNA binding motif WU28_RS12155 PF10502 Signal peptidase, peptidase S26 WU28_RS12160 PF06421 GTP-binding protein LepA C-terminus WU28_RS12160 PF03144 Elongation factor Tu domain 2 WU28_RS12160 PF00009 Elongation factor Tu GTP binding domain WU28_RS12160 PF00679 Elongation factor G C-terminus WU28_RS12165 PF13180 PDZ domain WU28_RS12180 PF08281 Sigma-70, region 4 WU28_RS12180 PF04542 Sigma-70 region 2 WU28_RS12190 PF00109 Beta-ketoacyl synthase, N-terminal domain WU28_RS12190 PF02801 Beta-ketoacyl synthase, C-terminal domain WU28_RS12195 PF00550 Phosphopantetheine attachment site WU28_RS12205 PF00698 Acyl transferase domain WU28_RS12210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WU28_RS12210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WU28_RS12215 PF02504 Fatty acid synthesis protein WU28_RS12220 PF01783 Ribosomal L32p protein family WU28_RS12225 PF02620 Large ribosomal RNA subunit accumulation protein YceD WU28_RS12230 PF02545 Maf-like protein WU28_RS12240 PF01510 N-acetylmuramoyl-L-alanine amidase WU28_RS12245 PF12805 FUSC-like inner membrane protein yccS WU28_RS12255 PF03883 Peroxide stress protein YaaA WU28_RS12270 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase WU28_RS12275 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS12285 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS12290 PF01416 tRNA pseudouridine synthase WU28_RS12300 PF02774 Semialdehyde dehydrogenase, dimerisation domain WU28_RS12300 PF01118 Semialdehyde dehydrogenase, NAD binding domain WU28_RS12305 PF00180 Isocitrate/isopropylmalate dehydrogenase WU28_RS12310 PF00694 Aconitase C-terminal domain WU28_RS12315 PF00330 Aconitase family (aconitate hydratase) WU28_RS12320 PF12849 PBP superfamily domain WU28_RS12325 PF00005 ABC transporter WU28_RS12330 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS12355 PF13247 4Fe-4S dicluster domain WU28_RS12360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WU28_RS12360 PF00384 Molybdopterin oxidoreductase WU28_RS12360 PF01568 Molydopterin dinucleotide binding domain WU28_RS12390 PF10609 NUBPL iron-transfer P-loop NTPase WU28_RS12395 PF12804 MobA-like NTP transferase domain WU28_RS12400 PF03454 MoeA C-terminal region (domain IV) WU28_RS12400 PF03453 MoeA N-terminal region (domain I and II) WU28_RS12400 PF00994 Probable molybdopterin binding domain WU28_RS12405 PF03205 Molybdopterin guanine dinucleotide synthesis protein B WU28_RS12410 PF01435 Peptidase family M48 WU28_RS12415 PF01264 Chorismate synthase WU28_RS12420 PF08448 PAS fold WU28_RS12420 PF00563 EAL domain WU28_RS12420 PF08447 PAS fold WU28_RS12420 PF00990 Diguanylate cyclase, GGDEF domain WU28_RS12435 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS12440 PF00005 ABC transporter WU28_RS12440 PF08402 TOBE domain WU28_RS12445 PF03466 LysR substrate binding domain WU28_RS12445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS12450 PF00300 Histidine phosphatase superfamily (branch 1) WU28_RS12460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU28_RS12460 PF02142 MGS-like domain WU28_RS12460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WU28_RS12465 PF00117 Glutamine amidotransferase class-I WU28_RS12465 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WU28_RS12470 PF00923 Transaldolase/Fructose-6-phosphate aldolase WU28_RS12495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU28_RS12495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU28_RS12500 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS12505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS12505 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS12505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS12510 PF03658 RnfH family Ubiquitin WU28_RS12515 PF03364 Polyketide cyclase / dehydrase and lipid transport WU28_RS12525 PF01668 SmpB protein WU28_RS12530 PF08448 PAS fold WU28_RS12530 PF00990 Diguanylate cyclase, GGDEF domain WU28_RS12535 PF01145 SPFH domain / Band 7 family WU28_RS12535 PF16200 C-terminal region of band_7 WU28_RS12550 PF00958 GMP synthase C terminal domain WU28_RS12550 PF00117 Glutamine amidotransferase class-I WU28_RS12555 PF00391 PEP-utilising enzyme, mobile domain WU28_RS12555 PF02896 PEP-utilising enzyme, TIM barrel domain WU28_RS12555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WU28_RS12560 PF03618 Kinase/pyrophosphorylase WU28_RS12565 PF08032 RNA 2'-O ribose methyltransferase substrate binding WU28_RS12565 PF00588 SpoU rRNA Methylase family WU28_RS12570 PF01351 Ribonuclease HII WU28_RS12575 PF02684 Lipid-A-disaccharide synthetase WU28_RS12580 PF00132 Bacterial transferase hexapeptide (six repeats) WU28_RS12580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 WU28_RS12585 PF07977 FabA-like domain WU28_RS12590 PF00132 Bacterial transferase hexapeptide (six repeats) WU28_RS12590 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD WU28_RS12595 PF03938 Outer membrane protein (OmpH-like) WU28_RS12600 PF07244 Surface antigen variable number repeat WU28_RS12600 PF01103 Surface antigen WU28_RS12605 PF17820 PDZ domain WU28_RS12605 PF02163 Peptidase family M50 WU28_RS12610 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WU28_RS12610 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WU28_RS12610 PF13288 DXP reductoisomerase C-terminal domain WU28_RS12620 PF01255 Putative undecaprenyl diphosphate synthase WU28_RS12625 PF01765 Ribosome recycling factor WU28_RS12630 PF00696 Amino acid kinase family WU28_RS12635 PF00889 Elongation factor TS WU28_RS12640 PF00318 Ribosomal protein S2 WU28_RS12645 PF00557 Metallopeptidase family M24 WU28_RS12650 PF01909 Nucleotidyltransferase domain WU28_RS12650 PF01966 HD domain WU28_RS12650 PF08335 GlnD PII-uridylyltransferase WU28_RS12665 PF00156 Phosphoribosyl transferase domain WU28_RS12680 PF08245 Mur ligase middle domain WU28_RS12680 PF02875 Mur ligase family, glutamate ligase domain WU28_RS12690 PF02465 Flagellar hook-associated protein 2 N-terminus WU28_RS12690 PF07195 Flagellar hook-associated protein 2 C-terminus WU28_RS12690 PF07196 Flagellin hook IN motif WU28_RS12695 PF02561 Flagellar protein FliS WU28_RS12715 PF01312 FlhB HrpN YscU SpaS Family WU28_RS12725 PF02049 Flagellar hook-basal body complex protein FliE WU28_RS12730 PF01514 Secretory protein of YscJ/FliF family WU28_RS12730 PF08345 Flagellar M-ring protein C-terminal WU28_RS12735 PF01706 FliG C-terminal domain WU28_RS12735 PF14842 FliG N-terminal domain WU28_RS12735 PF14841 FliG middle domain WU28_RS12745 PF18269 T3SS EscN ATPase C-terminal domain WU28_RS12745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU28_RS12770 PF03748 Flagellar basal body-associated protein FliL WU28_RS12775 PF02154 Flagellar motor switch protein FliM WU28_RS12775 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU28_RS12780 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term WU28_RS12780 PF16973 Flagellar motor switch protein FliN N-terminal WU28_RS12785 PF04347 Flagellar biosynthesis protein, FliO WU28_RS12790 PF00813 FliP family WU28_RS12795 PF01313 Bacterial export proteins, family 3 WU28_RS12800 PF01311 Bacterial export proteins, family 1 WU28_RS12810 PF08447 PAS fold WU28_RS12810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU28_RS12815 PF02203 Tar ligand binding domain homologue WU28_RS12815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU28_RS12815 PF00672 HAMP domain WU28_RS12820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU28_RS12820 PF00672 HAMP domain WU28_RS12820 PF02203 Tar ligand binding domain homologue WU28_RS12825 PF00669 Bacterial flagellin N-terminal helical region WU28_RS12830 PF00460 Flagella basal body rod protein WU28_RS12830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU28_RS12835 PF10135 Rod binding protein WU28_RS12835 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase WU28_RS12840 PF02119 Flagellar P-ring protein WU28_RS12845 PF02107 Flagellar L-ring protein WU28_RS12850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU28_RS12850 PF00460 Flagella basal body rod protein WU28_RS12855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU28_RS12855 PF00460 Flagella basal body rod protein WU28_RS12860 PF07559 Flagellar basal body protein FlaE WU28_RS12860 PF00460 Flagella basal body rod protein WU28_RS12860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU28_RS12865 PF03963 Flagellar hook capping protein - N-terminal region WU28_RS12865 PF13860 FlgD Ig-like domain WU28_RS12865 PF13861 FlgD Tudor-like domain WU28_RS12870 PF00460 Flagella basal body rod protein WU28_RS12870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WU28_RS12875 PF00460 Flagella basal body rod protein WU28_RS12885 PF04316 Anti-sigma-28 factor, FlgM WU28_RS12895 PF00448 SRP54-type protein, GTPase domain WU28_RS12905 PF01312 FlhB HrpN YscU SpaS Family WU28_RS12915 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS12920 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS12925 PF00005 ABC transporter WU28_RS12935 PF02558 Ketopantoate reductase PanE/ApbA WU28_RS12935 PF08546 Ketopantoate reductase PanE/ApbA C terminal WU28_RS12940 PF13378 Enolase C-terminal domain-like WU28_RS12945 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS12955 PF00694 Aconitase C-terminal domain WU28_RS12960 PF00356 Bacterial regulatory proteins, lacI family WU28_RS12965 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS12970 PF02515 CoA-transferase family III WU28_RS12980 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS12985 PF13380 CoA binding domain WU28_RS12985 PF13607 Succinyl-CoA ligase like flavodoxin domain WU28_RS12990 PF07729 FCD domain WU28_RS12990 PF00392 Bacterial regulatory proteins, gntR family WU28_RS12995 PF03328 HpcH/HpaI aldolase/citrate lyase family WU28_RS13005 PF03466 LysR substrate binding domain WU28_RS13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS13015 PF12951 Passenger-associated-transport-repeat WU28_RS13025 PF03551 Transcriptional regulator PadR-like family WU28_RS13035 PF03372 Endonuclease/Exonuclease/phosphatase family WU28_RS13040 PF13091 PLD-like domain WU28_RS13055 PF03706 Lysylphosphatidylglycerol synthase TM region WU28_RS13085 PF00128 Alpha amylase, catalytic domain WU28_RS13085 PF11896 Domain of unknown function (DUF3416) WU28_RS13090 PF00128 Alpha amylase, catalytic domain WU28_RS13090 PF16657 Maltogenic Amylase, C-terminal domain WU28_RS13095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU28_RS13095 PF02806 Alpha amylase, C-terminal all-beta domain WU28_RS13095 PF00128 Alpha amylase, catalytic domain WU28_RS13100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU28_RS13100 PF00128 Alpha amylase, catalytic domain WU28_RS13105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) WU28_RS13105 PF11941 Domain of unknown function (DUF3459) WU28_RS13105 PF00128 Alpha amylase, catalytic domain WU28_RS13115 PF00128 Alpha amylase, catalytic domain WU28_RS13125 PF08543 Phosphomethylpyrimidine kinase WU28_RS13130 PF01168 Alanine racemase, N-terminal domain WU28_RS13135 PF00392 Bacterial regulatory proteins, gntR family WU28_RS13135 PF00155 Aminotransferase class I and II WU28_RS13150 PF00582 Universal stress protein family WU28_RS13155 PF00248 Aldo/keto reductase family WU28_RS13165 PF02868 Thermolysin metallopeptidase, alpha-helical domain WU28_RS13165 PF16485 Protealysin propeptide WU28_RS13165 PF01447 Thermolysin metallopeptidase, catalytic domain WU28_RS13170 PF07681 DoxX WU28_RS13190 PF00578 AhpC/TSA family WU28_RS13195 PF03960 ArsC family WU28_RS13200 PF02515 CoA-transferase family III WU28_RS13220 PF00255 Glutathione peroxidase WU28_RS13225 PF02798 Glutathione S-transferase, N-terminal domain WU28_RS13225 PF00043 Glutathione S-transferase, C-terminal domain WU28_RS13250 PF02666 Phosphatidylserine decarboxylase WU28_RS13255 PF01070 FMN-dependent dehydrogenase WU28_RS13260 PF03180 NLPA lipoprotein WU28_RS13265 PF08808 RES domain WU28_RS13275 PF04241 Protein of unknown function (DUF423) WU28_RS13295 PF13458 Periplasmic binding protein WU28_RS13300 PF17912 MalK OB fold domain WU28_RS13300 PF00005 ABC transporter WU28_RS13305 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS13310 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS13315 PF13416 Bacterial extracellular solute-binding protein WU28_RS13320 PF14748 Pyrroline-5-carboxylate reductase dimerisation WU28_RS13320 PF03807 NADP oxidoreductase coenzyme F420-dependent WU28_RS13325 PF02592 Putative vitamin uptake transporter WU28_RS13335 PF13458 Periplasmic binding protein WU28_RS13340 PF02653 Branched-chain amino acid transport system / permease component WU28_RS13345 PF02653 Branched-chain amino acid transport system / permease component WU28_RS13345 PF11862 Domain of unknown function (DUF3382) WU28_RS13350 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS13350 PF00005 ABC transporter WU28_RS13355 PF00005 ABC transporter WU28_RS13360 PF01177 Asp/Glu/Hydantoin racemase WU28_RS13375 PF00892 EamA-like transporter family WU28_RS13385 PF04235 Protein of unknown function (DUF418) WU28_RS13390 PF00521 DNA gyrase/topoisomerase IV, subunit A WU28_RS13400 PF00204 DNA gyrase B WU28_RS13400 PF00986 DNA gyrase B subunit, carboxyl terminus WU28_RS13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS13400 PF01751 Toprim domain WU28_RS13405 PF00085 Thioredoxin WU28_RS13410 PF07498 Rho termination factor, N-terminal domain WU28_RS13410 PF07497 Rho termination factor, RNA-binding domain WU28_RS13410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WU28_RS13420 PF03710 Glutamate-ammonia ligase adenylyltransferase WU28_RS13420 PF08335 GlnD PII-uridylyltransferase WU28_RS13425 PF02677 Epoxyqueuosine reductase QueH WU28_RS13430 PF03315 Serine dehydratase beta chain WU28_RS13430 PF03313 Serine dehydratase alpha chain WU28_RS13435 PF02690 Na+/Pi-cotransporter WU28_RS13440 PF01738 Dienelactone hydrolase family WU28_RS13450 PF01612 3'-5' exonuclease WU28_RS13450 PF00476 DNA polymerase family A WU28_RS13450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WU28_RS13450 PF01367 5'-3' exonuclease, C-terminal SAM fold WU28_RS13455 PF03641 Possible lysine decarboxylase WU28_RS13470 PF00679 Elongation factor G C-terminus WU28_RS13470 PF00009 Elongation factor Tu GTP binding domain WU28_RS13470 PF03144 Elongation factor Tu domain 2 WU28_RS13475 PF01509 TruB family pseudouridylate synthase (N terminal domain) WU28_RS13475 PF16198 tRNA pseudouridylate synthase B C-terminal domain WU28_RS13480 PF02033 Ribosome-binding factor A WU28_RS13485 PF11987 Translation-initiation factor 2 WU28_RS13485 PF00009 Elongation factor Tu GTP binding domain WU28_RS13485 PF04760 Translation initiation factor IF-2, N-terminal region WU28_RS13485 PF08364 Bacterial translation initiation factor IF-2 associated region WU28_RS13490 PF13184 NusA-like KH domain WU28_RS13490 PF08529 NusA N-terminal domain WU28_RS13495 PF02576 RimP N-terminal domain WU28_RS13495 PF17384 RimP C-terminal SH3 domain WU28_RS13500 PF00849 RNA pseudouridylate synthase WU28_RS13500 PF01479 S4 domain WU28_RS13505 PF04079 Segregation and condensation complex subunit ScpB WU28_RS13515 PF03466 LysR substrate binding domain WU28_RS13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS13520 PF00881 Nitroreductase family WU28_RS13525 PF02492 CobW/HypB/UreG, nucleotide-binding domain WU28_RS13525 PF07683 Cobalamin synthesis protein cobW C-terminal domain WU28_RS13545 PF14497 Glutathione S-transferase, C-terminal domain WU28_RS13545 PF02798 Glutathione S-transferase, N-terminal domain WU28_RS13550 PF02401 LytB protein WU28_RS13555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WU28_RS13560 PF04002 RadC-like JAB domain WU28_RS13565 PF04199 Putative cyclase WU28_RS13570 PF03301 Tryptophan 2,3-dioxygenase WU28_RS13575 PF01197 Ribosomal protein L31 WU28_RS13585 PF01554 MatE WU28_RS13600 PF18073 Rubredoxin metal binding domain WU28_RS13605 PF12450 von Willebrand factor WU28_RS13605 PF00092 von Willebrand factor type A domain WU28_RS13605 PF12034 Domain of unknown function (DUF3520) WU28_RS13610 PF04545 Sigma-70, region 4 WU28_RS13610 PF04542 Sigma-70 region 2 WU28_RS13630 PF01168 Alanine racemase, N-terminal domain WU28_RS13630 PF00842 Alanine racemase, C-terminal domain WU28_RS13645 PF01593 Flavin containing amine oxidoreductase WU28_RS13645 PF01593 Flavin containing amine oxidoreductase WU28_RS13650 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WU28_RS13660 PF01061 ABC-2 type transporter WU28_RS13665 PF00005 ABC transporter WU28_RS13685 PF02424 ApbE family WU28_RS13690 PF00175 Oxidoreductase NAD-binding domain WU28_RS13690 PF00667 FAD binding domain WU28_RS13690 PF00258 Flavodoxin WU28_RS13700 PF07969 Amidohydrolase family WU28_RS13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS13705 PF03466 LysR substrate binding domain WU28_RS13715 PF09370 Phosphoenolpyruvate hydrolase-like WU28_RS13730 PF03797 Autotransporter beta-domain WU28_RS13730 PF03212 Pertactin WU28_RS13735 PF03212 Pertactin WU28_RS13735 PF03797 Autotransporter beta-domain WU28_RS13750 PF17871 AAA lid domain WU28_RS13750 PF10431 C-terminal, D2-small domain, of ClpB protein WU28_RS13750 PF02861 Clp amino terminal domain, pathogenicity island component WU28_RS13750 PF07724 AAA domain (Cdc48 subfamily) WU28_RS13750 PF00004 ATPase family associated with various cellular activities (AAA) WU28_RS13755 PF13545 Crp-like helix-turn-helix domain WU28_RS13755 PF00027 Cyclic nucleotide-binding domain WU28_RS13770 PF00293 NUDIX domain WU28_RS13775 PF12843 Putative quorum-sensing-regulated virulence factor WU28_RS13785 PF04542 Sigma-70 region 2 WU28_RS13785 PF08281 Sigma-70, region 4 WU28_RS13785 PF12680 SnoaL-like domain WU28_RS13790 PF02627 Carboxymuconolactone decarboxylase family WU28_RS13820 PF00155 Aminotransferase class I and II WU28_RS13825 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS13830 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS13835 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS13840 PF00005 ABC transporter WU28_RS13860 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WU28_RS13885 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS13890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WU28_RS13890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WU28_RS13895 PF03466 LysR substrate binding domain WU28_RS13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS13905 PF17676 LD-carboxypeptidase C-terminal domain WU28_RS13905 PF02016 LD-carboxypeptidase N-terminal domain WU28_RS13920 PF07690 Major Facilitator Superfamily WU28_RS13930 PF03466 LysR substrate binding domain WU28_RS13930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS13935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain WU28_RS13935 PF13378 Enolase C-terminal domain-like WU28_RS13940 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS13960 PF02567 Phenazine biosynthesis-like protein WU28_RS13970 PF03239 Iron permease FTR1 family WU28_RS13980 PF10634 Fe2+ transport protein WU28_RS13985 PF05233 PHB accumulation regulatory domain WU28_RS13985 PF07879 PHB/PHA accumulation regulator DNA-binding domain WU28_RS13990 PF00106 short chain dehydrogenase WU28_RS13995 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus WU28_RS14000 PF02578 Multi-copper polyphenol oxidoreductase laccase WU28_RS14005 PF01479 S4 domain WU28_RS14005 PF00849 RNA pseudouridylate synthase WU28_RS14010 PF13525 Outer membrane lipoprotein WU28_RS14015 PF13307 Helicase C-terminal domain WU28_RS14015 PF04851 Type III restriction enzyme, res subunit WU28_RS14020 PF17674 HHH domain WU28_RS14020 PF00575 S1 RNA binding domain WU28_RS14020 PF09371 Tex-like protein N-terminal domain WU28_RS14020 PF16921 Tex protein YqgF-like domain WU28_RS14025 PF00579 tRNA synthetases class I (W and Y) WU28_RS14050 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS14060 PF03466 LysR substrate binding domain WU28_RS14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS14070 PF03969 AFG1-like ATPase WU28_RS14075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU28_RS14075 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS14080 PF00364 Biotin-requiring enzyme WU28_RS14080 PF02817 e3 binding domain WU28_RS14080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU28_RS14085 PF00676 Dehydrogenase E1 component WU28_RS14085 PF16078 2-oxoglutarate dehydrogenase N-terminus WU28_RS14085 PF16870 2-oxoglutarate dehydrogenase C-terminal WU28_RS14085 PF02779 Transketolase, pyrimidine binding domain WU28_RS14095 PF01037 Lrp/AsnC ligand binding domain WU28_RS14100 PF17831 Pyruvate dehydrogenase E1 component middle domain WU28_RS14100 PF00456 Transketolase, thiamine diphosphate binding domain WU28_RS14105 PF01515 Phosphate acetyl/butaryl transferase WU28_RS14105 PF03949 Malic enzyme, NAD binding domain WU28_RS14105 PF00390 Malic enzyme, N-terminal domain WU28_RS14110 PF16970 Type-1 fimbrial protein, A WU28_RS14120 PF01272 Transcription elongation factor, GreA/GreB, C-term WU28_RS14120 PF03449 Transcription elongation factor, N-terminal WU28_RS14125 PF02811 PHP domain WU28_RS14135 PF00753 Metallo-beta-lactamase superfamily WU28_RS14135 PF13567 Domain of unknown function (DUF4131) WU28_RS14135 PF03772 Competence protein WU28_RS14165 PF01026 TatD related DNase WU28_RS14170 PF00005 ABC transporter WU28_RS14175 PF02687 FtsX-like permease family WU28_RS14175 PF12704 MacB-like periplasmic core domain WU28_RS14185 PF01368 DHH family WU28_RS14185 PF02272 DHHA1 domain WU28_RS14185 PF17768 RecJ OB domain WU28_RS14195 PF00106 short chain dehydrogenase WU28_RS14200 PF01336 OB-fold nucleic acid binding domain WU28_RS14200 PF00152 tRNA synthetases class II (D, K and N) WU28_RS14210 PF00440 Bacterial regulatory proteins, tetR family WU28_RS14210 PF17932 Tetracyclin repressor-like, C-terminal domain WU28_RS14215 PF00501 AMP-binding enzyme WU28_RS14220 PF00005 ABC transporter WU28_RS14230 PF11862 Domain of unknown function (DUF3382) WU28_RS14230 PF02653 Branched-chain amino acid transport system / permease component WU28_RS14240 PF00005 ABC transporter WU28_RS14240 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS14250 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS14250 PF07689 KaiB domain WU28_RS14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS14255 PF00486 Transcriptional regulatory protein, C terminal WU28_RS14255 PF00072 Response regulator receiver domain WU28_RS14260 PF02696 Uncharacterized ACR, YdiU/UPF0061 family WU28_RS14270 PF03631 Virulence factor BrkB WU28_RS14285 PF01207 Dihydrouridine synthase (Dus) WU28_RS14290 PF01636 Phosphotransferase enzyme family WU28_RS14315 PF01985 CRS1 / YhbY (CRM) domain WU28_RS14320 PF01728 FtsJ-like methyltransferase WU28_RS14325 PF01434 Peptidase family M41 WU28_RS14325 PF06480 FtsH Extracellular WU28_RS14325 PF17862 AAA+ lid domain WU28_RS14325 PF00004 ATPase family associated with various cellular activities (AAA) WU28_RS14330 PF00809 Pterin binding enzyme WU28_RS14335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WU28_RS14335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WU28_RS14335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WU28_RS14335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WU28_RS14345 PF02541 Ppx/GppA phosphatase family WU28_RS14350 PF02503 Polyphosphate kinase middle domain WU28_RS14350 PF13090 Polyphosphate kinase C-terminal domain 2 WU28_RS14350 PF13089 Polyphosphate kinase N-terminal domain WU28_RS14350 PF17941 Polyphosphate kinase C-terminal domain 1 WU28_RS14355 PF12849 PBP superfamily domain WU28_RS14360 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS14365 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS14370 PF00005 ABC transporter WU28_RS14385 PF01337 Barstar (barnase inhibitor) WU28_RS14395 PF01515 Phosphate acetyl/butaryl transferase WU28_RS14395 PF00390 Malic enzyme, N-terminal domain WU28_RS14395 PF03949 Malic enzyme, NAD binding domain WU28_RS14405 PF00155 Aminotransferase class I and II WU28_RS14410 PF01464 Transglycosylase SLT domain WU28_RS14410 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain WU28_RS14415 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WU28_RS14440 PF14824 Sirohaem biosynthesis protein central WU28_RS14440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WU28_RS14440 PF10414 Sirohaem synthase dimerisation region WU28_RS14445 PF03212 Pertactin WU28_RS14445 PF03797 Autotransporter beta-domain WU28_RS14460 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family WU28_RS14465 PF02547 Queuosine biosynthesis protein WU28_RS14470 PF01702 Queuine tRNA-ribosyltransferase WU28_RS14475 PF02699 Preprotein translocase subunit WU28_RS14480 PF13721 SecD export protein N-terminal TM region WU28_RS14480 PF07549 SecD/SecF GG Motif WU28_RS14480 PF02355 Protein export membrane protein WU28_RS14485 PF07549 SecD/SecF GG Motif WU28_RS14485 PF02355 Protein export membrane protein WU28_RS14500 PF04055 Radical SAM superfamily WU28_RS14500 PF01938 TRAM domain WU28_RS14500 PF00919 Uncharacterized protein family UPF0004 WU28_RS14505 PF02562 PhoH-like protein WU28_RS14510 PF02130 Uncharacterized protein family UPF0054 WU28_RS14515 PF00571 CBS domain WU28_RS14515 PF03471 Transporter associated domain WU28_RS14520 PF00795 Carbon-nitrogen hydrolase WU28_RS14525 PF00248 Aldo/keto reductase family WU28_RS14550 PF04344 Chemotaxis phosphatase, CheZ WU28_RS14555 PF00072 Response regulator receiver domain WU28_RS14560 PF00072 Response regulator receiver domain WU28_RS14560 PF01339 CheB methylesterase WU28_RS14570 PF00672 HAMP domain WU28_RS14570 PF02203 Tar ligand binding domain homologue WU28_RS14570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WU28_RS14575 PF01584 CheW-like domain WU28_RS14580 PF01627 Hpt domain WU28_RS14580 PF01584 CheW-like domain WU28_RS14580 PF02895 Signal transducing histidine kinase, homodimeric domain WU28_RS14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS14580 PF09078 CheY binding WU28_RS14585 PF00072 Response regulator receiver domain WU28_RS14590 PF13677 Membrane MotB of proton-channel complex MotA/MotB WU28_RS14590 PF00691 OmpA family WU28_RS14595 PF01618 MotA/TolQ/ExbB proton channel family WU28_RS14600 PF05280 Flagellar transcriptional activator (FlhC) WU28_RS14605 PF05247 Flagellar transcriptional activator (FlhD) WU28_RS14610 PF04542 Sigma-70 region 2 WU28_RS14610 PF04545 Sigma-70, region 4 WU28_RS14610 PF04539 Sigma-70 region 3 WU28_RS14620 PF01176 Translation initiation factor 1A / IF-1 WU28_RS14630 PF01476 LysM domain WU28_RS14630 PF08525 Opacity-associated protein A N-terminal motif WU28_RS14630 PF01551 Peptidase family M23 WU28_RS14640 PF00994 Probable molybdopterin binding domain WU28_RS14650 PF03591 AzlC protein WU28_RS14660 PF01556 DnaJ C terminal domain WU28_RS14660 PF00226 DnaJ domain WU28_RS14685 PF02798 Glutathione S-transferase, N-terminal domain WU28_RS14685 PF14834 Glutathione S-transferase, C-terminal domain WU28_RS14690 PF11339 Protein of unknown function (DUF3141) WU28_RS14695 PF01515 Phosphate acetyl/butaryl transferase WU28_RS14700 PF00871 Acetokinase family WU28_RS14710 PF00162 Phosphoglycerate kinase WU28_RS14715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WU28_RS14715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WU28_RS14720 PF00456 Transketolase, thiamine diphosphate binding domain WU28_RS14720 PF02780 Transketolase, C-terminal domain WU28_RS14720 PF02779 Transketolase, pyrimidine binding domain WU28_RS14725 PF04452 RNA methyltransferase WU28_RS14740 PF00669 Bacterial flagellin N-terminal helical region WU28_RS14740 PF00700 Bacterial flagellin C-terminal helical region WU28_RS14745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WU28_RS14745 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS14750 PF02817 e3 binding domain WU28_RS14750 PF00364 Biotin-requiring enzyme WU28_RS14750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WU28_RS14755 PF00456 Transketolase, thiamine diphosphate binding domain WU28_RS14755 PF17831 Pyruvate dehydrogenase E1 component middle domain WU28_RS14760 PF00989 PAS fold WU28_RS14760 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS14760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS14765 PF00196 Bacterial regulatory proteins, luxR family WU28_RS14765 PF00072 Response regulator receiver domain WU28_RS14770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WU28_RS14770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WU28_RS14775 PF01432 Peptidase family M3 WU28_RS14780 PF02630 SCO1/SenC WU28_RS14790 PF02321 Outer membrane efflux protein WU28_RS14795 PF00873 AcrB/AcrD/AcrF family WU28_RS14800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU28_RS14800 PF00529 HlyD membrane-fusion protein of T1SS WU28_RS14805 PF03466 LysR substrate binding domain WU28_RS14805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS14810 PF01479 S4 domain WU28_RS14810 PF00849 RNA pseudouridylate synthase WU28_RS14815 PF04345 Chorismate lyase WU28_RS14820 PF07690 Major Facilitator Superfamily WU28_RS14830 PF00248 Aldo/keto reductase family WU28_RS14840 PF00293 NUDIX domain WU28_RS14845 PF01245 Ribosomal protein L19 WU28_RS14860 PF04055 Radical SAM superfamily WU28_RS14870 PF01507 Phosphoadenosine phosphosulfate reductase family WU28_RS14875 PF12857 TOBE-like domain WU28_RS14875 PF17850 CysA C-terminal regulatory domain WU28_RS14875 PF00005 ABC transporter WU28_RS14880 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS14885 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS14900 PF00578 AhpC/TSA family WU28_RS14900 PF10417 C-terminal domain of 1-Cys peroxiredoxin WU28_RS14905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS14905 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS14905 PF12806 Acetyl-CoA dehydrogenase C-terminal like WU28_RS14905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS14910 PF01012 Electron transfer flavoprotein domain WU28_RS14910 PF00766 Electron transfer flavoprotein FAD-binding domain WU28_RS14915 PF01012 Electron transfer flavoprotein domain WU28_RS14920 PF00850 Histone deacetylase domain WU28_RS14925 PF13406 Transglycosylase SLT domain WU28_RS14930 PF00291 Pyridoxal-phosphate dependent enzyme WU28_RS14940 PF10531 SLBB domain WU28_RS14945 PF01370 NAD dependent epimerase/dehydratase family WU28_RS14950 PF00294 pfkB family carbohydrate kinase WU28_RS14955 PF18073 Rubredoxin metal binding domain WU28_RS14965 PF00216 Bacterial DNA-binding protein WU28_RS14970 PF00575 S1 RNA binding domain WU28_RS14975 PF02224 Cytidylate kinase WU28_RS14980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WU28_RS14985 PF02153 Prephenate dehydrogenase WU28_RS14990 PF00800 Prephenate dehydratase WU28_RS14990 PF01817 Chorismate mutase type II WU28_RS14990 PF01842 ACT domain WU28_RS14995 PF00266 Aminotransferase class-V WU28_RS15000 PF00521 DNA gyrase/topoisomerase IV, subunit A WU28_RS15000 PF03989 DNA gyrase C-terminal domain, beta-propeller WU28_RS15005 PF00691 OmpA family WU28_RS15015 PF13419 Haloacid dehalogenase-like hydrolase WU28_RS15020 PF07690 Major Facilitator Superfamily WU28_RS15045 PF03466 LysR substrate binding domain WU28_RS15045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS15050 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS15060 PF11799 impB/mucB/samB family C-terminal domain WU28_RS15060 PF11798 IMS family HHH motif WU28_RS15060 PF00817 impB/mucB/samB family WU28_RS15075 PF00326 Prolyl oligopeptidase family WU28_RS15080 PF17092 Penicillin-binding protein OB-like domain WU28_RS15080 PF00912 Transglycosylase WU28_RS15080 PF00905 Penicillin binding protein transpeptidase domain WU28_RS15085 PF00149 Calcineurin-like phosphoesterase WU28_RS15100 PF00248 Aldo/keto reductase family WU28_RS15105 PF00248 Aldo/keto reductase family WU28_RS15110 PF00005 ABC transporter WU28_RS15110 PF00664 ABC transporter transmembrane region WU28_RS15155 PF01039 Carboxyl transferase domain WU28_RS15160 PF00289 Biotin carboxylase, N-terminal domain WU28_RS15160 PF02785 Biotin carboxylase C-terminal domain WU28_RS15160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WU28_RS15165 PF07702 UTRA domain WU28_RS15165 PF00392 Bacterial regulatory proteins, gntR family WU28_RS15185 PF00364 Biotin-requiring enzyme WU28_RS15185 PF00682 HMGL-like WU28_RS15185 PF02436 Conserved carboxylase domain WU28_RS15190 PF00364 Biotin-requiring enzyme WU28_RS15200 PF01966 HD domain WU28_RS15220 PF07238 PilZ domain WU28_RS15220 PF07317 Flagellar regulator YcgR WU28_RS15240 PF05724 Thiopurine S-methyltransferase (TPMT) WU28_RS15245 PF00664 ABC transporter transmembrane region WU28_RS15245 PF00005 ABC transporter WU28_RS15260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS15260 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS15260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS15265 PF10369 Small subunit of acetolactate synthase WU28_RS15270 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain WU28_RS15270 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain WU28_RS15275 PF01066 CDP-alcohol phosphatidyltransferase WU28_RS15290 PF00312 Ribosomal protein S15 WU28_RS15295 PF00013 KH domain WU28_RS15295 PF01138 3' exoribonuclease family, domain 1 WU28_RS15295 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WU28_RS15295 PF00575 S1 RNA binding domain WU28_RS15295 PF03725 3' exoribonuclease family, domain 2 WU28_RS15310 PF00291 Pyridoxal-phosphate dependent enzyme WU28_RS15310 PF13291 ACT domain WU28_RS15325 PF00550 Phosphopantetheine attachment site WU28_RS15325 PF08240 Alcohol dehydrogenase GroES-like domain WU28_RS15325 PF00698 Acyl transferase domain WU28_RS15325 PF00109 Beta-ketoacyl synthase, N-terminal domain WU28_RS15325 PF14765 Polyketide synthase dehydratase WU28_RS15325 PF16197 Ketoacyl-synthetase C-terminal extension WU28_RS15325 PF08659 KR domain WU28_RS15325 PF02801 Beta-ketoacyl synthase, C-terminal domain WU28_RS15325 PF08990 Erythronolide synthase docking WU28_RS15330 PF00121 Triosephosphate isomerase WU28_RS15335 PF03840 Preprotein translocase SecG subunit WU28_RS15345 PF02028 BCCT, betaine/carnitine/choline family transporter WU28_RS15355 PF05034 Methylaspartate ammonia-lyase N-terminus WU28_RS15355 PF07476 Methylaspartate ammonia-lyase C-terminus WU28_RS15360 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS15375 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS15390 PF03466 LysR substrate binding domain WU28_RS15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS15395 PF01053 Cys/Met metabolism PLP-dependent enzyme WU28_RS15400 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family WU28_RS15415 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS15420 PF01266 FAD dependent oxidoreductase WU28_RS15430 PF05378 Hydantoinase/oxoprolinase N-terminal region WU28_RS15430 PF01968 Hydantoinase/oxoprolinase WU28_RS15440 PF00127 Copper binding proteins, plastocyanin/azurin family WU28_RS15450 PF02321 Outer membrane efflux protein WU28_RS15455 PF00873 AcrB/AcrD/AcrF family WU28_RS15460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WU28_RS15465 PF01638 HxlR-like helix-turn-helix WU28_RS15475 PF02028 BCCT, betaine/carnitine/choline family transporter WU28_RS15480 PF03466 LysR substrate binding domain WU28_RS15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS15485 PF00781 Diacylglycerol kinase catalytic domain WU28_RS15495 PF01569 PAP2 superfamily WU28_RS15525 PF13609 Gram-negative porin WU28_RS15530 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WU28_RS15535 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WU28_RS15540 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WU28_RS15545 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WU28_RS15555 PF10531 SLBB domain WU28_RS15555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WU28_RS15555 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WU28_RS15560 PF00384 Molybdopterin oxidoreductase WU28_RS15560 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WU28_RS15560 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WU28_RS15565 PF00146 NADH dehydrogenase WU28_RS15570 PF12838 4Fe-4S dicluster domain WU28_RS15575 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WU28_RS15580 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WU28_RS15585 PF00361 Proton-conducting membrane transporter WU28_RS15585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WU28_RS15590 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus WU28_RS15590 PF00361 Proton-conducting membrane transporter WU28_RS15595 PF00361 Proton-conducting membrane transporter WU28_RS15605 PF07715 TonB-dependent Receptor Plug Domain WU28_RS15605 PF00593 TonB dependent receptor WU28_RS15610 PF00593 TonB dependent receptor WU28_RS15610 PF07715 TonB-dependent Receptor Plug Domain WU28_RS15625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS15625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS15625 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS15630 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS15635 PF03466 LysR substrate binding domain WU28_RS15645 PF03461 TRCF domain WU28_RS15645 PF00271 Helicase conserved C-terminal domain WU28_RS15645 PF17757 UvrB interaction domain WU28_RS15645 PF00270 DEAD/DEAH box helicase WU28_RS15645 PF02559 CarD-like/TRCF domain WU28_RS15650 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WU28_RS15655 PF02542 YgbB family WU28_RS15665 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain WU28_RS15670 PF01433 Peptidase family M1 domain WU28_RS15670 PF17432 Domain of unknown function (DUF3458_C) ARM repeats WU28_RS15670 PF11940 Domain of unknown function (DUF3458) Ig-like fold WU28_RS15690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS15690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS15690 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS15700 PF09084 NMT1/THI5 like WU28_RS15705 PF00005 ABC transporter WU28_RS15710 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS15720 PF00501 AMP-binding enzyme WU28_RS15720 PF13193 AMP-binding enzyme C-terminal domain WU28_RS15725 PF08240 Alcohol dehydrogenase GroES-like domain WU28_RS15725 PF00107 Zinc-binding dehydrogenase WU28_RS15730 PF00392 Bacterial regulatory proteins, gntR family WU28_RS15730 PF07729 FCD domain WU28_RS15740 PF00392 Bacterial regulatory proteins, gntR family WU28_RS15740 PF07729 FCD domain WU28_RS15745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS15745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS15745 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS15765 PF01063 Amino-transferase class IV WU28_RS15770 PF00005 ABC transporter WU28_RS15775 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS15780 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS15785 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS15790 PF03466 LysR substrate binding domain WU28_RS15790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS15795 PF02321 Outer membrane efflux protein WU28_RS15800 PF13533 Biotin-lipoyl like WU28_RS15805 PF00664 ABC transporter transmembrane region WU28_RS15805 PF03412 Peptidase C39 family WU28_RS15805 PF00005 ABC transporter WU28_RS15810 PF03497 Anthrax toxin LF subunit WU28_RS15810 PF02382 N-terminal domain in RTX protein WU28_RS15810 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) WU28_RS15820 PF02794 RTX toxin acyltransferase family WU28_RS15825 PF00171 Aldehyde dehydrogenase family WU28_RS15830 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS15835 PF01266 FAD dependent oxidoreductase WU28_RS15840 PF02538 Hydantoinase B/oxoprolinase WU28_RS15845 PF01968 Hydantoinase/oxoprolinase WU28_RS15845 PF05378 Hydantoinase/oxoprolinase N-terminal region WU28_RS15850 PF03466 LysR substrate binding domain WU28_RS15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS15860 PF00348 Polyprenyl synthetase WU28_RS15870 PF00829 Ribosomal prokaryotic L21 protein WU28_RS15875 PF01016 Ribosomal L27 protein WU28_RS15880 PF01018 GTP1/OBG WU28_RS15880 PF01926 50S ribosome-binding GTPase WU28_RS15885 PF00696 Amino acid kinase family WU28_RS15885 PF01472 PUA domain WU28_RS15930 PF16220 Domain of unknown function (DUF4880) WU28_RS15930 PF04773 FecR protein WU28_RS15935 PF07715 TonB-dependent Receptor Plug Domain WU28_RS15935 PF00593 TonB dependent receptor WU28_RS15940 PF04264 YceI-like domain WU28_RS15950 PF03435 Saccharopine dehydrogenase NADP binding domain WU28_RS15950 PF16653 Saccharopine dehydrogenase C-terminal domain WU28_RS15955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WU28_RS15975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS15980 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS15985 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS15990 PF00005 ABC transporter WU28_RS15990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS15995 PF01425 Amidase WU28_RS16000 PF00202 Aminotransferase class-III WU28_RS16020 PF04972 BON domain WU28_RS16020 PF00691 OmpA family WU28_RS16025 PF01329 Pterin 4 alpha carbinolamine dehydratase WU28_RS16035 PF00483 Nucleotidyl transferase WU28_RS16040 PF01636 Phosphotransferase enzyme family WU28_RS16045 PF04453 LPS transport system D WU28_RS16050 PF09312 SurA N-terminal domain WU28_RS16050 PF00639 PPIC-type PPIASE domain WU28_RS16055 PF00398 Ribosomal RNA adenine dimethylase WU28_RS16060 PF02595 Glycerate kinase family WU28_RS16065 PF00224 Pyruvate kinase, barrel domain WU28_RS16065 PF02887 Pyruvate kinase, alpha/beta domain WU28_RS16070 PF07670 Nucleoside recognition WU28_RS16075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS16075 PF09317 Domain of unknown function (DUF1974) WU28_RS16075 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS16075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS16095 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS16100 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS16105 PF00005 ABC transporter WU28_RS16110 PF01032 FecCD transport family WU28_RS16120 PF00691 OmpA family WU28_RS16125 PF07676 WD40-like Beta Propeller Repeat WU28_RS16125 PF04052 TolB amino-terminal domain WU28_RS16135 PF02472 Biopolymer transport protein ExbD/TolR WU28_RS16140 PF01618 MotA/TolQ/ExbB proton channel family WU28_RS16145 PF03061 Thioesterase superfamily WU28_RS16150 PF03129 Anticodon binding domain WU28_RS16150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WU28_RS16150 PF04073 Aminoacyl-tRNA editing domain WU28_RS16155 PF00293 NUDIX domain WU28_RS16160 PF00072 Response regulator receiver domain WU28_RS16160 PF00486 Transcriptional regulatory protein, C terminal WU28_RS16170 PF02586 SOS response associated peptidase (SRAP) WU28_RS16240 PF06791 Prophage tail length tape measure protein WU28_RS16385 PF03180 NLPA lipoprotein WU28_RS16395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WU28_RS16395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WU28_RS16400 PF00005 ABC transporter WU28_RS16405 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS16405 PF00005 ABC transporter WU28_RS16410 PF02653 Branched-chain amino acid transport system / permease component WU28_RS16415 PF02653 Branched-chain amino acid transport system / permease component WU28_RS16420 PF13458 Periplasmic binding protein WU28_RS16425 PF01425 Amidase WU28_RS16430 PF00484 Carbonic anhydrase WU28_RS16445 PF16124 RecQ zinc-binding WU28_RS16445 PF00270 DEAD/DEAH box helicase WU28_RS16445 PF00271 Helicase conserved C-terminal domain WU28_RS16445 PF00570 HRDC domain WU28_RS16445 PF09382 RQC domain WU28_RS16450 PF17864 RuvB AAA lid domain WU28_RS16450 PF05491 RuvB C-terminal winged helix domain WU28_RS16450 PF05496 Holliday junction DNA helicase RuvB P-loop domain WU28_RS16455 PF00291 Pyridoxal-phosphate dependent enzyme WU28_RS16460 PF01370 NAD dependent epimerase/dehydratase family WU28_RS16465 PF07499 RuvA, C-terminal domain WU28_RS16465 PF01330 RuvA N terminal domain WU28_RS16470 PF02075 Crossover junction endodeoxyribonuclease RuvC WU28_RS16475 PF02142 MGS-like domain WU28_RS16475 PF01808 AICARFT/IMPCHase bienzyme WU28_RS16480 PF02954 Bacterial regulatory protein, Fis family WU28_RS16485 PF01207 Dihydrouridine synthase (Dus) WU28_RS16490 PF01494 FAD binding domain WU28_RS16500 PF00557 Metallopeptidase family M24 WU28_RS16500 PF05195 Aminopeptidase P, N-terminal domain WU28_RS16525 PF13609 Gram-negative porin WU28_RS16535 PF00483 Nucleotidyl transferase WU28_RS16540 PF01435 Peptidase family M48 WU28_RS16540 PF13181 Tetratricopeptide repeat WU28_RS16545 PF00561 alpha/beta hydrolase fold WU28_RS16560 PF01063 Amino-transferase class IV WU28_RS16575 PF00271 Helicase conserved C-terminal domain WU28_RS16575 PF00270 DEAD/DEAH box helicase WU28_RS16595 PF02464 Competence-damaged protein WU28_RS16595 PF18146 Damage-inducible protein CinA KH domain WU28_RS16595 PF00994 Probable molybdopterin binding domain WU28_RS16600 PF01614 Bacterial transcriptional regulator WU28_RS16600 PF09339 IclR helix-turn-helix domain WU28_RS16605 PF05785 Rho-activating domain of cytotoxic necrotizing factor WU28_RS16605 PF18807 Tripartite Tc toxins repeat WU28_RS16610 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS16620 PF01180 Dihydroorotate dehydrogenase WU28_RS16625 PF04376 Arginine-tRNA-protein transferase, N terminus WU28_RS16625 PF04377 Arginine-tRNA-protein transferase, C terminus WU28_RS16630 PF03588 Leucyl/phenylalanyl-tRNA protein transferase WU28_RS16640 PF03466 LysR substrate binding domain WU28_RS16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS16680 PF07729 FCD domain WU28_RS16680 PF00392 Bacterial regulatory proteins, gntR family WU28_RS16685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS16685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS16685 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS16690 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS16695 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WU28_RS16700 PF00390 Malic enzyme, N-terminal domain WU28_RS16700 PF03949 Malic enzyme, NAD binding domain WU28_RS16700 PF01515 Phosphate acetyl/butaryl transferase WU28_RS16710 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS16715 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS16720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS16720 PF00005 ABC transporter WU28_RS16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS16735 PF03466 LysR substrate binding domain WU28_RS16750 PF01022 Bacterial regulatory protein, arsR family WU28_RS16765 PF03594 Benzoate membrane transport protein WU28_RS16770 PF00037 4Fe-4S binding domain WU28_RS16775 PF01467 Cytidylyltransferase-like WU28_RS16785 PF02881 SRP54-type protein, helical bundle domain WU28_RS16785 PF00448 SRP54-type protein, GTPase domain WU28_RS16795 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS16800 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS16805 PF00005 ABC transporter WU28_RS16815 PF00005 ABC transporter WU28_RS16835 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WU28_RS16835 PF00925 GTP cyclohydrolase II WU28_RS16840 PF00885 6,7-dimethyl-8-ribityllumazine synthase WU28_RS16845 PF01029 NusB family WU28_RS16850 PF02769 AIR synthase related protein, C-terminal domain WU28_RS16850 PF00586 AIR synthase related protein, N-terminal domain WU28_RS16855 PF04608 Phosphatidylglycerophosphatase A WU28_RS16860 PF18146 Damage-inducible protein CinA KH domain WU28_RS16860 PF00994 Probable molybdopterin binding domain WU28_RS16860 PF02464 Competence-damaged protein WU28_RS16865 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WU28_RS16870 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS16875 PF01219 Prokaryotic diacylglycerol kinase WU28_RS16880 PF03631 Virulence factor BrkB WU28_RS16885 PF03212 Pertactin WU28_RS16885 PF03797 Autotransporter beta-domain WU28_RS16890 PF00118 TCP-1/cpn60 chaperonin family WU28_RS16895 PF00166 Chaperonin 10 Kd subunit WU28_RS16915 PF00890 FAD binding domain WU28_RS16925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS16925 PF03466 LysR substrate binding domain WU28_RS16930 PF00890 FAD binding domain WU28_RS16950 PF00990 Diguanylate cyclase, GGDEF domain WU28_RS16955 PF00072 Response regulator receiver domain WU28_RS16985 PF12867 DinB superfamily WU28_RS16985 PF03781 Sulfatase-modifying factor enzyme 1 WU28_RS16990 PF10017 Histidine-specific methyltransferase, SAM-dependent WU28_RS17000 PF13091 PLD-like domain WU28_RS17000 PF13396 Phospholipase_D-nuclease N-terminal WU28_RS17010 PF01645 Conserved region in glutamate synthase WU28_RS17015 PF04143 Sulphur transport WU28_RS17020 PF03547 Membrane transport protein WU28_RS17025 PF13673 Acetyltransferase (GNAT) domain WU28_RS17045 PF00773 RNB domain WU28_RS17045 PF17876 Cold shock domain WU28_RS17045 PF08206 Ribonuclease B OB domain WU28_RS17045 PF08461 Ribonuclease R winged-helix domain WU28_RS17045 PF00575 S1 RNA binding domain WU28_RS17050 PF08032 RNA 2'-O ribose methyltransferase substrate binding WU28_RS17050 PF00588 SpoU rRNA Methylase family WU28_RS17055 PF01053 Cys/Met metabolism PLP-dependent enzyme WU28_RS17060 PF13640 2OG-Fe(II) oxygenase superfamily WU28_RS17060 PF18331 PKHD-type hydroxylase C-terminal domain WU28_RS17065 PF00216 Bacterial DNA-binding protein WU28_RS17080 PF01618 MotA/TolQ/ExbB proton channel family WU28_RS17085 PF02472 Biopolymer transport protein ExbD/TolR WU28_RS17090 PF00486 Transcriptional regulatory protein, C terminal WU28_RS17090 PF00072 Response regulator receiver domain WU28_RS17095 PF08521 Two-component sensor kinase N-terminal WU28_RS17095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS17095 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS17100 PF02705 K+ potassium transporter WU28_RS17105 PF00764 Arginosuccinate synthase WU28_RS17110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU28_RS17110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU28_RS17115 PF00202 Aminotransferase class-III WU28_RS17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS17125 PF03466 LysR substrate binding domain WU28_RS17135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU28_RS17135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU28_RS17140 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS17155 PF00392 Bacterial regulatory proteins, gntR family WU28_RS17155 PF07729 FCD domain WU28_RS17165 PF07690 Major Facilitator Superfamily WU28_RS17175 PF02627 Carboxymuconolactone decarboxylase family WU28_RS17180 PF00578 AhpC/TSA family WU28_RS17185 PF00672 HAMP domain WU28_RS17185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS17185 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS17195 PF00072 Response regulator receiver domain WU28_RS17195 PF00486 Transcriptional regulatory protein, C terminal WU28_RS17200 PF00814 Glycoprotease family WU28_RS17205 PF03167 Uracil DNA glycosylase superfamily WU28_RS17210 PF07690 Major Facilitator Superfamily WU28_RS17215 PF06470 SMC proteins Flexible Hinge Domain WU28_RS17215 PF02463 RecF/RecN/SMC N terminal domain WU28_RS17225 PF12826 Helix-hairpin-helix motif WU28_RS17225 PF03120 NAD-dependent DNA ligase OB-fold domain WU28_RS17225 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WU28_RS17225 PF01653 NAD-dependent DNA ligase adenylation domain WU28_RS17225 PF00533 BRCA1 C Terminus (BRCT) domain WU28_RS17240 PF04279 Intracellular septation protein A WU28_RS17245 PF01641 SelR domain WU28_RS17250 PF00005 ABC transporter WU28_RS17255 PF02361 Cobalt transport protein WU28_RS17260 PF02632 BioY family WU28_RS17275 PF00005 ABC transporter WU28_RS17275 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS17280 PF01063 Amino-transferase class IV WU28_RS17295 PF02653 Branched-chain amino acid transport system / permease component WU28_RS17305 PF00005 ABC transporter WU28_RS17310 PF00005 ABC transporter WU28_RS17310 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS17315 PF10576 Iron-sulfur binding domain of endonuclease III WU28_RS17315 PF00633 Helix-hairpin-helix motif WU28_RS17315 PF00730 HhH-GPD superfamily base excision DNA repair protein WU28_RS17320 PF04060 Putative Fe-S cluster WU28_RS17330 PF00970 Oxidoreductase FAD-binding domain WU28_RS17330 PF00175 Oxidoreductase NAD-binding domain WU28_RS17335 PF00037 4Fe-4S binding domain WU28_RS17335 PF11953 Domain of unknown function (DUF3470) WU28_RS17340 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family WU28_RS17340 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain WU28_RS17345 PF01042 Endoribonuclease L-PSP WU28_RS17355 PF06167 Glucose-regulated metallo-peptidase M90 WU28_RS17360 PF13291 ACT domain WU28_RS17360 PF04607 Region found in RelA / SpoT proteins WU28_RS17360 PF02824 TGS domain WU28_RS17365 PF07687 Peptidase dimerisation domain WU28_RS17365 PF01546 Peptidase family M20/M25/M40 WU28_RS17370 PF00291 Pyridoxal-phosphate dependent enzyme WU28_RS17375 PF00290 Tryptophan synthase alpha chain WU28_RS17380 PF01039 Carboxyl transferase domain WU28_RS17380 PF17848 Acetyl-coA carboxylase zinc finger domain WU28_RS17385 PF09411 Lipid A 3-O-deacylase (PagL) WU28_RS17400 PF12111 Polyribonucleotide phosphorylase C terminal WU28_RS17400 PF00575 S1 RNA binding domain WU28_RS17400 PF10150 Ribonuclease E/G family WU28_RS17405 PF01479 S4 domain WU28_RS17405 PF00849 RNA pseudouridylate synthase WU28_RS17410 PF13419 Haloacid dehalogenase-like hydrolase WU28_RS17415 PF00174 Oxidoreductase molybdopterin binding domain WU28_RS17420 PF01794 Ferric reductase like transmembrane component WU28_RS17430 PF02515 CoA-transferase family III WU28_RS17435 PF03466 LysR substrate binding domain WU28_RS17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS17445 PF02515 CoA-transferase family III WU28_RS17450 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS17460 PF03466 LysR substrate binding domain WU28_RS17465 PF01042 Endoribonuclease L-PSP WU28_RS17470 PF00175 Oxidoreductase NAD-binding domain WU28_RS17470 PF00042 Globin WU28_RS17470 PF00970 Oxidoreductase FAD-binding domain WU28_RS17475 PF02667 Short chain fatty acid transporter WU28_RS17480 PF00171 Aldehyde dehydrogenase family WU28_RS17485 PF07729 FCD domain WU28_RS17485 PF00392 Bacterial regulatory proteins, gntR family WU28_RS17495 PF00313 'Cold-shock' DNA-binding domain WU28_RS17500 PF03466 LysR substrate binding domain WU28_RS17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS17520 PF02803 Thiolase, C-terminal domain WU28_RS17520 PF00108 Thiolase, N-terminal domain WU28_RS17530 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS17530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS17530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS17535 PF03466 LysR substrate binding domain WU28_RS17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS17540 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS17545 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS17550 PF02515 CoA-transferase family III WU28_RS17555 PF03741 Integral membrane protein TerC family WU28_RS17555 PF03471 Transporter associated domain WU28_RS17560 PF02308 MgtC family WU28_RS17565 PF14492 Elongation Factor G, domain II WU28_RS17565 PF03144 Elongation factor Tu domain 2 WU28_RS17565 PF00009 Elongation factor Tu GTP binding domain WU28_RS17565 PF03764 Elongation factor G, domain IV WU28_RS17565 PF00679 Elongation factor G C-terminus WU28_RS17570 PF00155 Aminotransferase class I and II WU28_RS17570 PF00392 Bacterial regulatory proteins, gntR family WU28_RS17580 PF00582 Universal stress protein family WU28_RS17585 PF03144 Elongation factor Tu domain 2 WU28_RS17585 PF00009 Elongation factor Tu GTP binding domain WU28_RS17585 PF14492 Elongation Factor G, domain II WU28_RS17585 PF03764 Elongation factor G, domain IV WU28_RS17585 PF00679 Elongation factor G C-terminus WU28_RS17595 PF00873 AcrB/AcrD/AcrF family WU28_RS17600 PF00929 Exonuclease WU28_RS17615 PF02667 Short chain fatty acid transporter WU28_RS17625 PF03616 Sodium/glutamate symporter WU28_RS17645 PF00535 Glycosyl transferase family 2 WU28_RS17650 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase WU28_RS17670 PF12146 Serine aminopeptidase, S33 WU28_RS17675 PF01810 LysE type translocator WU28_RS17680 PF00892 EamA-like transporter family WU28_RS17690 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS17700 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS17710 PF03466 LysR substrate binding domain WU28_RS17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS17715 PF00205 Thiamine pyrophosphate enzyme, central domain WU28_RS17715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WU28_RS17715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WU28_RS17720 PF02515 CoA-transferase family III WU28_RS17725 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS17725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU28_RS17725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU28_RS17730 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS17740 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS17745 PF09339 IclR helix-turn-helix domain WU28_RS17760 PF02515 CoA-transferase family III WU28_RS17765 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS17770 PF02515 CoA-transferase family III WU28_RS17790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WU28_RS17790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WU28_RS17795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WU28_RS17805 PF13580 SIS domain WU28_RS17810 PF04972 BON domain WU28_RS17815 PF00578 AhpC/TSA family WU28_RS17820 PF03180 NLPA lipoprotein WU28_RS17825 PF00696 Amino acid kinase family WU28_RS17835 PF00440 Bacterial regulatory proteins, tetR family WU28_RS17840 PF00939 Sodium:sulfate symporter transmembrane region WU28_RS17845 PF02615 Malate/L-lactate dehydrogenase WU28_RS17850 PF01098 Cell cycle protein WU28_RS17855 PF03717 Penicillin-binding Protein dimerisation domain WU28_RS17855 PF00905 Penicillin binding protein transpeptidase domain WU28_RS17865 PF04085 rod shape-determining protein MreC WU28_RS17875 PF02686 Glu-tRNAGln amidotransferase C subunit WU28_RS17880 PF01425 Amidase WU28_RS17885 PF02637 GatB domain WU28_RS17885 PF02934 GatB/GatE catalytic domain WU28_RS17890 PF00156 Phosphoribosyl transferase domain WU28_RS17895 PF03372 Endonuclease/Exonuclease/phosphatase family WU28_RS17900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WU28_RS17900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WU28_RS17905 PF03458 UPF0126 domain WU28_RS17930 PF00970 Oxidoreductase FAD-binding domain WU28_RS17930 PF00111 2Fe-2S iron-sulfur cluster binding domain WU28_RS17930 PF00175 Oxidoreductase NAD-binding domain WU28_RS17940 PF00171 Aldehyde dehydrogenase family WU28_RS17960 PF00392 Bacterial regulatory proteins, gntR family WU28_RS17960 PF07729 FCD domain WU28_RS17970 PF02423 Ornithine cyclodeaminase/mu-crystallin family WU28_RS17995 PF08281 Sigma-70, region 4 WU28_RS17995 PF04542 Sigma-70 region 2 WU28_RS18000 PF04773 FecR protein WU28_RS18000 PF16220 Domain of unknown function (DUF4880) WU28_RS18005 PF04886 PT repeat WU28_RS18005 PF07715 TonB-dependent Receptor Plug Domain WU28_RS18005 PF00593 TonB dependent receptor WU28_RS18010 PF05171 Haemin-degrading HemS.ChuX domain WU28_RS18015 PF01497 Periplasmic binding protein WU28_RS18020 PF01032 FecCD transport family WU28_RS18025 PF00005 ABC transporter WU28_RS18030 PF04463 Protein of unknown function (DUF523) WU28_RS18035 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA WU28_RS18040 PF13532 2OG-Fe(II) oxygenase superfamily WU28_RS18045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WU28_RS18045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WU28_RS18050 PF00990 Diguanylate cyclase, GGDEF domain WU28_RS18050 PF03707 Bacterial signalling protein N terminal repeat WU28_RS18050 PF00563 EAL domain WU28_RS18060 PF11737 Protein of unknown function (DUF3300) WU28_RS18070 PF03466 LysR substrate binding domain WU28_RS18070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS18075 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS18080 PF12706 Beta-lactamase superfamily domain WU28_RS18095 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS18100 PF00501 AMP-binding enzyme WU28_RS18100 PF13193 AMP-binding enzyme C-terminal domain WU28_RS18115 PF00912 Transglycosylase WU28_RS18125 PF00149 Calcineurin-like phosphoesterase WU28_RS18130 PF01553 Acyltransferase WU28_RS18135 PF01979 Amidohydrolase family WU28_RS18140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WU28_RS18140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WU28_RS18145 PF03652 Holliday junction resolvase WU28_RS18150 PF02622 Uncharacterized ACR, COG1678 WU28_RS18155 PF00301 Rubredoxin WU28_RS18160 PF08543 Phosphomethylpyrimidine kinase WU28_RS18165 PF02581 Thiamine monophosphate synthase WU28_RS18170 PF00202 Aminotransferase class-III WU28_RS18190 PF00501 AMP-binding enzyme WU28_RS18190 PF13193 AMP-binding enzyme C-terminal domain WU28_RS18195 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS18195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS18195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WU28_RS18200 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS18215 PF00005 ABC transporter WU28_RS18220 PF00005 ABC transporter WU28_RS18220 PF12399 Branched-chain amino acid ATP-binding cassette transporter WU28_RS18225 PF02653 Branched-chain amino acid transport system / permease component WU28_RS18225 PF11862 Domain of unknown function (DUF3382) WU28_RS18230 PF02653 Branched-chain amino acid transport system / permease component WU28_RS18240 PF07859 alpha/beta hydrolase fold WU28_RS18270 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) WU28_RS18280 PF03466 LysR substrate binding domain WU28_RS18280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS18285 PF07690 Major Facilitator Superfamily WU28_RS18290 PF00920 Dehydratase family WU28_RS18295 PF12833 Helix-turn-helix domain WU28_RS18300 PF08502 LeuA allosteric (dimerisation) domain WU28_RS18300 PF00682 HMGL-like WU28_RS18310 PF07859 alpha/beta hydrolase fold WU28_RS18315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS18320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU28_RS18325 PF04299 Putative FMN-binding domain WU28_RS18335 PF13180 PDZ domain WU28_RS18340 PF01784 NIF3 (NGG1p interacting factor 3) WU28_RS18345 PF01741 Large-conductance mechanosensitive channel, MscL WU28_RS18350 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WU28_RS18350 PF00355 Rieske [2Fe-2S] domain WU28_RS18355 PF00032 Cytochrome b(C-terminal)/b6/petD WU28_RS18355 PF00033 Cytochrome b/b6/petB WU28_RS18360 PF02167 Cytochrome C1 family WU28_RS18365 PF00043 Glutathione S-transferase, C-terminal domain WU28_RS18365 PF02798 Glutathione S-transferase, N-terminal domain WU28_RS18370 PF04386 Stringent starvation protein B WU28_RS18400 PF13609 Gram-negative porin WU28_RS18415 PF00156 Phosphoribosyl transferase domain WU28_RS18420 PF00664 ABC transporter transmembrane region WU28_RS18420 PF00005 ABC transporter WU28_RS18425 PF00005 ABC transporter WU28_RS18425 PF00664 ABC transporter transmembrane region WU28_RS18430 PF08173 Membrane bound YbgT-like protein WU28_RS18435 PF02322 Cytochrome bd terminal oxidase subunit II WU28_RS18440 PF01654 Cytochrome bd terminal oxidase subunit I WU28_RS18460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WU28_RS18460 PF02770 Acyl-CoA dehydrogenase, middle domain WU28_RS18460 PF18158 Adaptive response protein AidB N-terminal domain WU28_RS18465 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS18470 PF02515 CoA-transferase family III WU28_RS18480 PF03466 LysR substrate binding domain WU28_RS18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS18485 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS18495 PF00206 Lyase WU28_RS18495 PF10415 Fumarase C C-terminus WU28_RS18500 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE WU28_RS18505 PF11741 AMIN domain WU28_RS18505 PF01520 N-acetylmuramoyl-L-alanine amidase WU28_RS18510 PF09335 SNARE associated Golgi protein WU28_RS18515 PF08676 MutL C terminal dimerisation domain WU28_RS18515 PF01119 DNA mismatch repair protein, C-terminal domain WU28_RS18525 PF00586 AIR synthase related protein, N-terminal domain WU28_RS18525 PF02769 AIR synthase related protein, C-terminal domain WU28_RS18530 PF00308 Bacterial dnaA protein WU28_RS18540 PF12626 Polymerase A arginine-rich C-terminus WU28_RS18540 PF12627 Probable RNA and SrmB- binding site of polymerase A WU28_RS18540 PF01743 Poly A polymerase head domain WU28_RS18545 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WU28_RS18550 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS18560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WU28_RS18565 PF03480 Bacterial extracellular solute-binding protein, family 7 WU28_RS18570 PF00392 Bacterial regulatory proteins, gntR family WU28_RS18570 PF07702 UTRA domain WU28_RS18580 PF02627 Carboxymuconolactone decarboxylase family WU28_RS18610 PF09518 HindIII restriction endonuclease WU28_RS18615 PF07549 SecD/SecF GG Motif WU28_RS18615 PF02355 Protein export membrane protein WU28_RS18620 PF01964 Radical SAM ThiC family WU28_RS18620 PF13667 ThiC-associated domain WU28_RS18625 PF00171 Aldehyde dehydrogenase family WU28_RS18630 PF01565 FAD binding domain WU28_RS18630 PF02913 FAD linked oxidases, C-terminal domain WU28_RS18660 PF06508 Queuosine biosynthesis protein QueC WU28_RS18665 PF00311 Phosphoenolpyruvate carboxylase WU28_RS18670 PF03797 Autotransporter beta-domain WU28_RS18670 PF00082 Subtilase family WU28_RS18675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WU28_RS18675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WU28_RS18680 PF02667 Short chain fatty acid transporter WU28_RS18690 PF01614 Bacterial transcriptional regulator WU28_RS18690 PF09339 IclR helix-turn-helix domain WU28_RS18695 PF01144 Coenzyme A transferase WU28_RS18700 PF01144 Coenzyme A transferase WU28_RS18705 PF02426 Muconolactone delta-isomerase WU28_RS18715 PF12146 Serine aminopeptidase, S33 WU28_RS18735 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS18745 PF02515 CoA-transferase family III WU28_RS18750 PF07729 FCD domain WU28_RS18750 PF00392 Bacterial regulatory proteins, gntR family WU28_RS18755 PF02347 Glycine cleavage system P-protein WU28_RS18760 PF01597 Glycine cleavage H-protein WU28_RS18765 PF01571 Aminomethyltransferase folate-binding domain WU28_RS18765 PF08669 Glycine cleavage T-protein C-terminal barrel domain WU28_RS18770 PF02535 ZIP Zinc transporter WU28_RS18775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WU28_RS18775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WU28_RS18790 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain WU28_RS18790 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain WU28_RS18790 PF01276 Orn/Lys/Arg decarboxylase, major domain WU28_RS18815 PF00692 dUTPase WU28_RS18830 PF10609 NUBPL iron-transfer P-loop NTPase WU28_RS18840 PF09334 tRNA synthetases class I (M) WU28_RS18840 PF01588 Putative tRNA binding domain WU28_RS18845 PF17773 UPF0176 acylphosphatase like domain WU28_RS18845 PF00581 Rhodanese-like domain WU28_RS18870 PF00210 Ferritin-like domain WU28_RS18880 PF03144 Elongation factor Tu domain 2 WU28_RS18880 PF00009 Elongation factor Tu GTP binding domain WU28_RS18880 PF16658 Class II release factor RF3, C-terminal domain WU28_RS18885 PF01810 LysE type translocator WU28_RS18890 PF00271 Helicase conserved C-terminal domain WU28_RS18890 PF00270 DEAD/DEAH box helicase WU28_RS18900 PF04536 TPM domain WU28_RS18905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS18905 PF00005 ABC transporter WU28_RS18920 PF03109 ABC1 family WU28_RS18935 PF01209 ubiE/COQ5 methyltransferase family WU28_RS18940 PF00486 Transcriptional regulatory protein, C terminal WU28_RS18940 PF00072 Response regulator receiver domain WU28_RS18945 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS18945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS18945 PF00989 PAS fold WU28_RS18945 PF11808 Phosphate regulon sensor protein PhoR WU28_RS18950 PF00486 Transcriptional regulatory protein, C terminal WU28_RS18950 PF00072 Response regulator receiver domain WU28_RS18955 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS18955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS18955 PF00672 HAMP domain WU28_RS18965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WU28_RS18965 PF01842 ACT domain WU28_RS18965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WU28_RS18970 PF03466 LysR substrate binding domain WU28_RS18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS18980 PF02682 Carboxyltransferase domain, subdomain C and D WU28_RS18985 PF02626 Carboxyltransferase domain, subdomain A and B WU28_RS18990 PF03746 LamB/YcsF family WU28_RS19000 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS19005 PF01494 FAD binding domain WU28_RS19010 PF01494 FAD binding domain WU28_RS19015 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS19025 PF02515 CoA-transferase family III WU28_RS19030 PF07729 FCD domain WU28_RS19030 PF00392 Bacterial regulatory proteins, gntR family WU28_RS19045 PF00291 Pyridoxal-phosphate dependent enzyme WU28_RS19045 PF00585 C-terminal regulatory domain of Threonine dehydratase WU28_RS19050 PF13609 Gram-negative porin WU28_RS19065 PF03466 LysR substrate binding domain WU28_RS19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WU28_RS19075 PF04552 Sigma-54, DNA binding domain WU28_RS19075 PF04963 Sigma-54 factor, core binding domain WU28_RS19075 PF00309 Sigma-54 factor, Activator interacting domain (AID) WU28_RS19085 PF00682 HMGL-like WU28_RS19085 PF08502 LeuA allosteric (dimerisation) domain WU28_RS19090 PF01425 Amidase WU28_RS19100 PF00356 Bacterial regulatory proteins, lacI family WU28_RS19115 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS19120 PF12857 TOBE-like domain WU28_RS19120 PF00005 ABC transporter WU28_RS19135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WU28_RS19135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WU28_RS19135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WU28_RS19140 PF07690 Major Facilitator Superfamily WU28_RS19145 PF00132 Bacterial transferase hexapeptide (six repeats) WU28_RS19145 PF14602 Hexapeptide repeat of succinyl-transferase WU28_RS19145 PF12804 MobA-like NTP transferase domain WU28_RS19165 PF02630 SCO1/SenC WU28_RS19170 PF01040 UbiA prenyltransferase family WU28_RS19175 PF02628 Cytochrome oxidase assembly protein WU28_RS19195 PF00510 Cytochrome c oxidase subunit III WU28_RS19210 PF00115 Cytochrome C and Quinol oxidase polypeptide I WU28_RS19215 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WU28_RS19215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WU28_RS19225 PF00999 Sodium/hydrogen exchanger family WU28_RS19230 PF00149 Calcineurin-like phosphoesterase WU28_RS19235 PF04545 Sigma-70, region 4 WU28_RS19235 PF04542 Sigma-70 region 2 WU28_RS19235 PF00140 Sigma-70 factor, region 1.2 WU28_RS19245 PF00756 Putative esterase WU28_RS19250 PF00107 Zinc-binding dehydrogenase WU28_RS19250 PF08240 Alcohol dehydrogenase GroES-like domain WU28_RS19260 PF00310 Glutamine amidotransferases class-II WU28_RS19260 PF01645 Conserved region in glutamate synthase WU28_RS19260 PF01493 GXGXG motif WU28_RS19260 PF04898 Glutamate synthase central domain WU28_RS19265 PF07992 Pyridine nucleotide-disulphide oxidoreductase WU28_RS19265 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WU28_RS19270 PF03922 OmpW family WU28_RS19275 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS19280 PF00005 ABC transporter WU28_RS19285 PF02405 Permease MlaE WU28_RS19290 PF02470 MlaD protein WU28_RS19295 PF04333 MlaA lipoprotein WU28_RS19305 PF00005 ABC transporter WU28_RS19310 PF01061 ABC-2 type transporter WU28_RS19320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WU28_RS19325 PF01634 ATP phosphoribosyltransferase WU28_RS19330 PF00815 Histidinol dehydrogenase WU28_RS19335 PF00155 Aminotransferase class I and II WU28_RS19340 PF00475 Imidazoleglycerol-phosphate dehydratase WU28_RS19345 PF00117 Glutamine amidotransferase class-I WU28_RS19350 PF00977 Histidine biosynthesis protein WU28_RS19355 PF00977 Histidine biosynthesis protein WU28_RS19360 PF01502 Phosphoribosyl-AMP cyclohydrolase WU28_RS19365 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase WU28_RS19370 PF01230 HIT domain WU28_RS19375 PF02416 mttA/Hcf106 family WU28_RS19380 PF02416 mttA/Hcf106 family WU28_RS19385 PF00902 Sec-independent protein translocase protein (TatC) WU28_RS19395 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS19400 PF02917 Pertussis toxin, subunit 1 WU28_RS19405 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain WU28_RS19405 PF03440 Aerolysin/Pertussis toxin (APT) domain WU28_RS19410 PF09275 Pertussis toxin S4 subunit WU28_RS19415 PF09276 Pertussis toxin S5 subunit WU28_RS19420 PF03440 Aerolysin/Pertussis toxin (APT) domain WU28_RS19420 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain WU28_RS19425 PF04956 TrbC/VIRB2 family WU28_RS19430 PF05101 Type IV secretory pathway, VirB3-like protein WU28_RS19435 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WU28_RS19440 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WU28_RS19450 PF04335 VirB8 protein WU28_RS19455 PF03524 Conjugal transfer protein WU28_RS19460 PF03743 Bacterial conjugation TrbI-like protein WU28_RS19465 PF00437 Type II/IV secretion system protein WU28_RS19475 PF00892 EamA-like transporter family WU28_RS19495 PF12631 MnmE helical domain WU28_RS19495 PF10396 GTP-binding protein TrmE N-terminus WU28_RS19495 PF01926 50S ribosome-binding GTPase WU28_RS19500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS19505 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS19510 PF12911 N-terminal TM domain of oligopeptide transport permease C WU28_RS19510 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS19515 PF00005 ABC transporter WU28_RS19515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS19525 PF01960 ArgJ family WU28_RS19535 PF00293 NUDIX domain WU28_RS19555 PF02321 Outer membrane efflux protein WU28_RS19560 PF00873 AcrB/AcrD/AcrF family WU28_RS19565 PF00873 AcrB/AcrD/AcrF family WU28_RS19570 PF13533 Biotin-lipoyl like WU28_RS19575 PF07072 Cell division protein WU28_RS19580 PF01121 Dephospho-CoA kinase WU28_RS19585 PF06750 Bacterial Peptidase A24 N-terminal domain WU28_RS19585 PF01478 Type IV leader peptidase family WU28_RS19600 PF02569 Pantoate-beta-alanine ligase WU28_RS19605 PF02616 Segregation and condensation protein ScpA WU28_RS19615 PF07690 Major Facilitator Superfamily WU28_RS19620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain WU28_RS19620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain WU28_RS19630 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS19635 PF00005 ABC transporter WU28_RS19640 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS19645 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS19650 PF00497 Bacterial extracellular solute-binding proteins, family 3 WU28_RS19655 PF00005 ABC transporter WU28_RS19660 PF18075 FtsX extracellular domain WU28_RS19665 PF03975 CheD chemotactic sensory transduction WU28_RS19675 PF14815 NUDIX domain WU28_RS19675 PF00730 HhH-GPD superfamily base excision DNA repair protein WU28_RS19675 PF00633 Helix-hairpin-helix motif WU28_RS19675 PF10576 Iron-sulfur binding domain of endonuclease III WU28_RS19685 PF08241 Methyltransferase domain WU28_RS19695 PF02515 CoA-transferase family III WU28_RS19700 PF02515 CoA-transferase family III WU28_RS19710 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS19715 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS19720 PF00881 Nitroreductase family WU28_RS19730 PF00682 HMGL-like WU28_RS19735 PF00378 Enoyl-CoA hydratase/isomerase WU28_RS19740 PF02515 CoA-transferase family III WU28_RS19745 PF03401 Tripartite tricarboxylate transporter family receptor WU28_RS19755 PF00199 Catalase WU28_RS19755 PF06628 Catalase-related immune-responsive WU28_RS19760 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS19765 PF00005 ABC transporter WU28_RS19775 PF02668 Taurine catabolism dioxygenase TauD, TfdA family WU28_RS19780 PF07687 Peptidase dimerisation domain WU28_RS19780 PF01546 Peptidase family M20/M25/M40 WU28_RS19785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS19785 PF00005 ABC transporter WU28_RS19790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WU28_RS19790 PF00005 ABC transporter WU28_RS19795 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS19795 PF12911 N-terminal TM domain of oligopeptide transport permease C WU28_RS19800 PF00528 Binding-protein-dependent transport system inner membrane component WU28_RS19805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WU28_RS19810 PF10396 GTP-binding protein TrmE N-terminus WU28_RS19810 PF12631 MnmE helical domain WU28_RS19810 PF01926 50S ribosome-binding GTPase WU28_RS19820 PF00072 Response regulator receiver domain WU28_RS19820 PF00486 Transcriptional regulatory protein, C terminal WU28_RS19825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WU28_RS19825 PF00512 His Kinase A (phospho-acceptor) domain WU28_RS19840 PF01970 Tripartite tricarboxylate transporter TctA family WU28_RS19845 PF00155 Aminotransferase class I and II WU28_RS19850 PF00313 'Cold-shock' DNA-binding domain