CXD94_RS00015    3394 ..    3417 +  -6.8  -2.96979   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCTGTTCC  51 16
CXD94_RS00020 NONE
CXD94_RS00025    5210 ..    5241 +  -3.6  -3.14344   ACGCGGCCAGCGGCG      CTTACCG-CGCCG GCTCGTA CGGCGTCGGGCAG      TTGCTGGCGGCCGTG  45 103
CXD94_RS00035    6413 ..    6434 +  -7.3  -4.09685   CTCAGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  67 116
CXD94_RS00040 NONE
CXD94_RS00045    6668 ..    6680 +  -2.7  -3.65046   GTCATGGGCACCATC                GAATT CTA AGTTC                TTCTTCAAGTCAGAA  53 28
         tuf    7926 ..    7960 + -18.1  -3.72893   AAGGCGCGGTTTTCC    CATGGATAGAGGGGCC GGAT GGCC-CTCTATCCATG     TTTGCTGGAAAAGTA  93 39
CXD94_RS00055 NONE
        secE NONE
        nusG    9056 ..    9074 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CXD94_RS00075   10300 ..   10321 + -14.5  -2.62184   ATAGAACTTTGGGCC           GCATCCGGA CTTG TCCGGATGC            TGCTGTCAAAGACCG  71 55
CXD94_RS00080   11043 ..   11056 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG CGTC CGGAA                TTCGCTGAACGACAA  41 31
CXD94_RS00085   11517 ..   11549 + -17.7  -4.35524   AGACCTCGCGTCGAC      GCCCGGGGACAGC GCTCTTA GCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 40
        rpoB NONE
        rpoC   20076 ..   20099 + -16.8   -4.4078   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 83
CXD94_RS00105   22113 ..   22147 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS00115   23199 ..   23223 +  -3.4  -3.02144   AGCCCCAGGCCAGCG          CCGCCTACTT CGTTC GAGCCGGCGG          TGTTGACGCGCGTAA  42 124
CXD94_RS00135   28501 ..   28535 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS00170 NONE
CXD94_RS00175   35503 ..   35560 + -16.7  -3.53224   ACCTGATGGCGCTGT GCGAACCCGCGCCATGACGCCGGGCCGG CGC CCGGCACGGCCCCGCGGCCCGGGC-CGC TTTGCGGGCCGACTA  86 9
CXD94_RS00180 NONE
        glyQ NONE
CXD94_RS00195 NONE
CXD94_RS00200   41644 ..   41662 +  -2.2  -2.53015   CAACTGCTGCAGGAG             GCCTGATC CAT GGCCTGGC             TGCGTTCGGCGCTGT  37 20
CXD94_RS00205 NONE
CXD94_RS00210   43260 ..   43285 +  -5.9  -3.74693   CCCTGCCGCAGTTCT         GAGCCCGCGCC GGCT GGCGCGGCCGA          TTTGCTACGATGACG  59 24
        gloA NONE
CXD94_RS00220   44649 ..   44659 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  57 407
CXD94_RS00230   46147 ..   46159 +  -6.2  -2.71144   GGCCACGCCCGGGGC                CGCC GGCCA GGCG                TAATTGGCCAGGCTG  47 509
CXD94_RS00240   47088 ..   47100 +  -6.2  -3.96531   AGTCTCGATTCGTGG                CGGC ATCAA GCCG                TTTATCCATATCTGA  64 315
CXD94_RS00250   48522 ..   48560 + -10.9  -3.14132   GGGCCAGGTTGATCT  CCAGCGGCGCGGCGGC GCGGGAAG GCCGCCGCGAC-CGGG   TTGGTGCCCAGCAGC  64 520
CXD94_RS00260 NONE
        metW   51127 ..   51137 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 97
CXD94_RS00275   52147 ..   52162 +  -3.2  -2.70932   TCACAGCTAGCAGGA              CCGG CGCGCCTA CCGG               TCGTTCCACGGGAGA  40 31
CXD94_RS00280   53486 ..   53501 +  -7.5  -3.14527   CGCTACCCGCGCAAG              CCGCC CGCAGT GGCGG               TATTGATAACAATTC  54 71
CXD94_RS00385   71119 ..   71129 +  -4.6  -3.07013   CAAGCATGGACGCAT                 GTCG CAA CGGC                 TGTATTGACCCAGTG  45 59
CXD94_RS00390   71717 ..   71727 +  -4.6  -3.10464   ATTCAACAAGAACAC                 CGTG CAG CGCG                 TGTTCCAGTTGATGG  47 249
        htpG   74611 ..   74643 +  -6.8  -4.08767   ATGCGCTCGATCAAG      GGGTGGCTGTCCCC GCGCG GGGGGCTGACACCG      TTTTGGCAGGCTGGC  67 43
CXD94_RS00430   78853 ..   78887 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS00440   80841 ..   80857 +  -2.1  -4.07568   AGTCTTCCCCGATCA              GCAGTTC TTC GTACAGC              TTTTCCCCGGGCCGC  58 213
        waaC   94021 ..   94047 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ACA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CXD94_RS00505   95323 ..   95333 +  -8.2  -3.14132   ATTGGCTGGGATAGC                 CCGC CGT GCGG                 TTCGTCAGGGCCGCA  56 27
CXD94_RS00525 NONE
CXD94_RS00530   99607 ..   99621 +  -4.2  -5.01732   CATGCCGGCCACCAT               CCCG CTGCGGC CGGG               TTTTTTCCAGCGCTT  81 404
CXD94_RS00540 NONE
CXD94_RS00545  101459 ..  101472 +  -2.4  -3.51934   TGACCCGGCCCGCGT               TGCA TCACGT TGCA                TGTTTGTAAGCGCAA  48 38
CXD94_RS00550 NONE
CXD94_RS00555  103792 ..  103817 + -13.2  -3.61178   CTGTAGCGGCCGGCA         GGCGGGCGGC CCTGGC GCCGCCCGCG          TTTCGCGTCCCTCGC  77 35
CXD94_RS00560 NONE
        lipB  104827 ..  104849 + -12.7  -3.31792   CTTTTTTGTCTCGAA           CCGGAGCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  71 49
        lipA  105902 ..  105922 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
        metC  111548 ..  111567 + -10.7  -3.89346   CCCATCAACGACAAA            GCCTCCG CATGGA CGGAGGC             TTTGTGGCGTCGGGG  77 53
CXD94_RS00620 NONE
CXD94_RS00625  115786 ..  115814 +    -6  -3.78419   GTCCGCAGGGGGACT        GGCACCGG CCAAATCCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 100
CXD94_RS00630  117066 ..  117081 +  -5.4  -2.72991   CCATGCTCCATCCGG              GGACAGG CAC CC-GTCC              TCCTTCAGCGTATCC  45 81
CXD94_RS00695  129777 ..  129819 +  -5.5   -3.1247   ACGGATCGCCGTCGA TACGGTGGCGGACCAGCTGC CAGG GCTGCTGCTGCGCCAG-GTA TTCGCTGTCGAAGAT  47 466
        rpoN  133636 ..  133651 +  -6.2  -4.30833   CCACGCCGCGGGTCG              TTAGGA CGCC TCCTAA               TTTGTTCCTGATTTC  73 22
CXD94_RS00715  134048 ..  134079 + -16.6  -3.96148   GAGCGACGCGGCGCC      TTGCGCCAGCCGGC TCAT GCTGCCTGGCGCAA       TTTATCGTCCCCACA  93 39
CXD94_RS00750  143838 ..  143851 +  -5.2  -3.77188   CGGGACGGATCCAGG               GCGC CGCATT GCGC                TATTTATGTTTCAAT  60 70
CXD94_RS00755  144611 ..  144631 +  -8.9  -3.96148   GAGCCGGGCGACGAC            CGCCTGCGC GTC GCGTAGGCC            TTTCTCCTCACGACA  70 8
CXD94_RS00785  151345 ..  151378 +  -7.4   -3.1505   CGGCCACGCCGGCCA     GCGCGCCGACCTGGT AGACC ACCAGGTCGTAG-GC     TTCCTGCGGGGTGAT  54 510
CXD94_RS00810  155114 ..  155135 +  -6.5  -4.28361   GAAGCGCACCAGTTT           C-TCGGCCAC TTC GCGGCCGATG           TTTTCCTGGGATTCC  72 374
        ubiE  161871 ..  161886 + -11.8  -3.53811   AAGGTTTGCCGCGCA              GGCCCC AACC GGGGCC               TTTCCAGCCGCTCCC  72 121
CXD94_RS00850  163041 ..  163068 + -19.2  -3.30007   CGGCCGGGCTGCACC        GTGAACCGGCCC GCCA GGGCCGGTTCGC         TTATGGGCCGGTCTT 100 103
CXD94_RS00855 NONE
        ubiB  165691 ..  165723 +  -4.8  -3.13403   TCAAGATGAACGCGA     TCACCGAGTGGGCGGC CTT GCCGGCCAC-CGA-GA     TGTTCCTGCGCGACA  47 330
CXD94_RS00890 NONE
CXD94_RS00895 NONE
CXD94_RS00900 NONE
CXD94_RS00905  174611 ..  174632 + -17.3   -4.7373   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG 100 48
CXD94_RS00915 NONE
CXD94_RS00920  176497 ..  176514 +  -6.3  -3.05844   ACAGGTCGTCGGCGA             TCAG-CGC CTC GCGGCTGA             TCTTGCGCTCGGGCG  49 219
CXD94_RS00930  178025 ..  178035 +  -6.8  -2.62735   TGGGCCGCCGGTTCC                 CAGG AGT CCTG                 TCATGTCCGCAATCT  47 104
CXD94_RS00935  178837 ..  178869 +  -2.6  -3.92324   TGGCGGCGCCGCGTC     CAGCCCC-C-GCGCCG TAG CGCCTTGGCGGGGCTG     TTTACTATTACGCCC  56 9
CXD94_RS00940  179758 ..  179802 +  -8.3  -3.92324   GGGTTCGGCCTTCTC GTCGGCGTGGCTGGCGGCCAG CAC CATGCCCTCGGACACGCCGAA TTTCATCTTGCGCGG  70 135
        apbC  183469 ..  183486 +  -3.3  -3.14125   TGGTGGTCCGGCCCG             CCTGACG CATG CGTCGGA              TATTGCGTGTCTGCC  44 21
CXD94_RS00960 NONE
CXD94_RS00965  189076 ..  189088 +  -7.7  -3.37344   GCGGCGGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  59 49
CXD94_RS00970  189867 ..  189888 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC CTC GTCGGGCTGC           TTCATGTAGCGGGAA  52 216
CXD94_RS00990  191703 ..  191731 +    -8  -5.24129   GTCCTACAATTCCCC        GAGGTCGGCCCG CTCGT CGGGCCGGTTGC        TTTTTTGTCACCAGC  95 76
CXD94_RS00995  194086 ..  194125 + -33.6  -3.65812   GCAGTAAATCCGACG  CGCCGCGCCGCGCCGCCC GAGG GGGCGGCCCGGCGCGGCG   TTGTCTTCGAGGGAG 100 34
CXD94_RS01000  195393 ..  195403 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS01005  196420 ..  196445 +  -4.7  -3.72481   TAGCCTGGCGGGCAC        GGCGCATGCGG GCAGGG CCGC--GCGCC         TATTGTTTTGGTAAA  55 38
CXD94_RS01010 NONE
CXD94_RS01015  198059 ..  198074 +    -6  -3.55444   AACAGGGGCGGATCG              GCGCCC ATCC GGACGC               TTTGCGGCATGGCGC  56 49
        gcvT  199552 ..  199575 +  -7.4  -3.97368   GGCTTCCGCGCGGCC          GTTGGC-CGCC GGA GGCGCGCAAAC          TTTCTCCATTCCCAC  68 47
        gcvH  200009 ..  200029 +  -8.1  -3.90744   CAACGGGCCGGCCCG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAAAAC  68 48
        gcvP  202929 ..  202974 +    -9  -3.75665   GTGCGCGCTCATGGC GCATGACGAGGTGCCTGTCCCC CCAT GGGGACTGGCACCT-G-CAAGA TTTCATGGCGTCTGC  68 44
CXD94_RS01040 NONE
CXD94_RS01045  206459 ..  206495 +  -6.6  -4.26019   CTTCGGCCTGTGCCT   GTGCGCCGACCTGGTG CTGGCCA CGCCAG--CGGCGCGC   TTTTGCCTGTCGTTC  70 411
CXD94_RS01055  207666 ..  207701 +  -3.2  -3.56568   GTGGCCACTTGTGCC    GCAATGCGC-CAGCAGG GAA CTTGCTACGCGCATCGG    TTTGGCAGATCATTG  49 54
CXD94_RS01060  208573 ..  208584 +  -7.2  -3.60098   GGGCTTGCCGTTCAT                GCCG ACCA CGGC                 TTTGGCGTAGCCGGT  60 481
CXD94_RS01095  213385 ..  213399 +  -4.2  -3.72893   CAGGGTGCGCGTCAG               GCCG ATCAGCC CGGC               TTTGGTCGCCGAATA  55 352
        queC  223940 ..  223953 +  -4.5  -2.82623   GCATCAGGACGGTGT               CGCGCC ATT GGC-CG               TGCTTGTAGCCCACC  44 126
CXD94_RS01135  225471 ..  225505 +  -8.4  -2.84298   CCTCCAGGCATCGCC     GCGCGACTGAGCCTGG CGC CCGGCCTGCGTTGCGC     TAGTTGTGAACTGTC  54 16
CXD94_RS01150 NONE
CXD94_RS01155  228853 ..  228874 + -18.7  -3.41051   ACGACTTTGCTGTGC           CGGGCGCCC CTTG GGGCGCCCG            TTGTCCTACCCGTAG  93 80
CXD94_RS01160  230439 ..  230461 +    -4  -4.18018   CCACCGCCTTTTCCT           GCATGCCCTG CTG CAGCGCGTCC           TTTTCGCTGACGCCC  63 123
CXD94_RS01170  233220 ..  233239 +  -5.6   -4.7497   GGCCGGCGCAACCGG            GACAGCCT TGCG GGGCTGCC             TTTTTCATGGATGGG  81 64
CXD94_RS01175  234324 ..  234334 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 76
CXD94_RS01180  235314 ..  235359 + -13.5  -3.14132   CAACCTGGACGAATA CAACCTATTGACAGTTCACAG CTAG CTGTGATGTCTCAATAGGTTG TTCATCCAGGCCGGA  72 1
CXD94_RS01185  236541 ..  236575 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS01205  239868 ..  239906 +  -7.3  -3.14229   AGGCGGCGCTCGAAG  GCGCCGACGGCGCCC-TGC AGG GCATGGGCCCGGGCG-CGC  TGTTCATCAACATGT  52 315
CXD94_RS01225  245045 ..  245063 + -11.6  -3.04144   ATCATCCATCCCACG             GCGCCGGC GGC GCCGGCCC             TGTTCGCGCTGGCCG  65 367
CXD94_RS01235  247066 ..  247113 + -10.4  -3.01712   AAGGCAATCTGCAGC CCTGACCAGGGGAGCCGCTGCCC TCA GCGCAGCGGCTCGA-TGGCCTGG TCTTCCAGCGCGGCC  60 21
CXD94_RS01260  251703 ..  251732 + -23.7  -3.18264   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 97
CXD94_RS01275  255336 ..  255365 + -23.7  -2.62616   CGACACCCGCGGCAA       GGGTGCCTGTCCC AGCC GGGACAGGCACCC        TGCTGTACGCCATCG 100 72
        fumC  258831 ..  258843 +  -4.7  -2.52464   GCGCGCCGCTAGAGC                GGCGC CGG GCGCG                TCAGTTGGGCGCGCC  42 29
CXD94_RS01300  260972 ..  260987 + -11.8   -5.4505   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC 100 54
         ggt  264157 ..  264176 +  -5.6  -4.36914   CGCCAGGAAGATCGG            CCCGGCGCC GGT GG-GCAGGG            TTTTATACGGCGCGA  69 414
CXD94_RS01330  267991 ..  268008 + -14.1  -3.84451   GTCGAACCAGGAAAA             CGCCGCC GTCA GGCGGCG              TTTGCGTTTGCGCAA  83 441
CXD94_RS01340 NONE
CXD94_RS01345 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC  275101 ..  275138 +  -2.7  -2.71041   AGGCCGGCTGCACCG   CGCCGCGCCCATGT GACTGGCCTAA GCATCGGCGC-GCG   GTTATAGTTCGCCTT  40 10
CXD94_RS01370  275859 ..  275885 +  -8.7  -2.84812   CCCAATCGGGCAGCA        CGCG-CACCAGG CCTG CCTGATGGCGCG         TGTCATGCTGTCGCT  54 157
CXD94_RS01380  277290 ..  277331 +  -7.9  -4.18488   CGGCCGGACACTGTG GGCAGTGCTTCGCGCGCAGC ATG GCTGCGCCAGGCGCA-TGTC TTTCTTGCCATCCGT  74 167
CXD94_RS01400 NONE
CXD94_RS01405  280222 ..  280234 +  -3.3  -3.34517   TGCATTGTAGTGAAA                CTTCG CGC CGCAG                TCTTTCGGACAGGCT  46 518
        mscL  285491 ..  285503 +  -6.2  -3.63569   CAGGCCCAGCACGCG                CGCC AGCTG GGCG                TTGTTGCCCCATTGC  57 479
CXD94_RS01450  287194 ..  287228 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS01480  293565 ..  293591 + -12.3  -2.58544   CAGCACCGCCAGCTC        GGCCGCGGCCAC GGCG GTG-CCGCGGTC         ATTGTGCGGGTGCAC  62 285
CXD94_RS01490  295208 ..  295251 +  -8.1  -3.33814   CGGCGCGGCGCGAGC CGCCGG-CCTGAGGCGCCGGCG GGG CGTCG-TGCC-CGGATCCGGCG TATTATCTAGCGTTT  56 15
CXD94_RS01495  297306 ..  297332 + -11.5  -2.74488   TGTCCTGATTCACAG        GCCCGCG-CGGC CAGC GCCGGCGCGCGC         TGATTCGCGTCGTTG  62 176
CXD94_RS01505  299847 ..  299866 +  -7.8  -3.35679   TGATGCCCAGCTCCA            GCCCGATC AGGT GATAGGGC             TTGTACATGGCCGAA  59 391
CXD94_RS01530  304391 ..  304422 + -10.1  -3.05384   TCCACCTTGAGCAGC      GGCAGCCGGCCCAC GTCCA GCGGGTC-GCTGCC      TTCGGTGCGCAGCAG  59 344
CXD94_RS01550 NONE
CXD94_RS01555 NONE
CXD94_RS01560 NONE
CXD94_RS01565 NONE
CXD94_RS01570  311399 ..  311426 +  -9.1  -4.07568   TCCCGAAGTCTTCCT        TC-CTGCGCCGG CCTGT CCGGCGCAGCGC        TTTTGGGGACGGCAC  75 56
CXD94_RS01585 NONE
CXD94_RS01590 NONE
CXD94_RS01595 NONE
CXD94_RS01600 NONE
CXD94_RS01605  319630 ..  319648 +  -3.1   -3.4247   ATCTTGGCGTGCGTC            TG-GCGGG CGCG CTCGCTCA             TGTTGTTGACGTTCT  47 336
CXD94_RS01630 NONE
CXD94_RS01635 NONE
        ruvX NONE
CXD94_RS01645 NONE
CXD94_RS01650  327622 ..  327636 +  -2.7  -2.82516   CAGCCGCAGCGTGCA               CACGC CGTTC GCGGG               TATGATGCTGCCCGG  41 64
CXD94_RS01655  328442 ..  328478 + -16.4  -3.06831   TCGCCGGCGAGCTGT    AGCCGGCCCGGGCGGC GCGTG GCCGCCCGCGGCGGCG    TTCAGTCGCCGTTGG  79 24
CXD94_RS01675  332769 ..  332793 +   -15  -3.16492   TCATCCTCCGGTTGC         CGCCGCGCGGG CCGT CCCGC-CGGCG          TGTTGCTGGCTATCC  76 408
CXD94_RS01720 NONE
CXD94_RS01725 NONE
CXD94_RS01730  341911 ..  341933 +    -9  -2.71681   CGCGCAGCAGCCGGT           CGCCGGCGGC ATG GCCGTGGGTG           TCATTGACCGACTTG  52 361
CXD94_RS01755  345624 ..  345634 +  -2.4  -2.82519   CCAGCGTGTCGCACC                 AGCG CGC CGCC                 TGATTGATGTCATGC  39 190
CXD94_RS01800 NONE
CXD94_RS01805 NONE
CXD94_RS01810 NONE
CXD94_RS01815  356139 ..  356173 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS01835  360347 ..  360371 +  -7.8  -4.96388   CTGAAGCGGCGTCGC          GCCCGGGG TGCGGGTTT TCCCGGGC          TTTTATTTAGTGCTT  86 37
CXD94_RS01840 NONE
CXD94_RS01845 NONE
CXD94_RS01850  363201 ..  363217 +  -3.6  -2.62157   CAAGAAGTAGACGCA              CCCTGG AACGG CCATGG              CTTATCGCATTCATC  40 31
CXD94_RS01855  364268 ..  364295 + -15.6  -2.56596   TGCCCGGGGTGCCGG        GGTGCCTGTCCC AGCG GGGACAGGCACA         TGGATTCCTGCGGGG  74 69
CXD94_RS01860  365248 ..  365276 + -10.1  -4.11216   GCAACAAGCGGCGGG        GTTTGCCGGCGCG GCT CGCGGCGGCGCGC        TTTTCGGCATGCCGC  78 94
CXD94_RS01865  366865 ..  366881 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD94_RS01880  369112 ..  369141 +  -4.1  -4.29738   ACATAGTTGACGTAG       TTGCCGGCGCCGT GGCC GTGGCGCACGCAG        TTTTCGTGGATATCG  67 144
CXD94_RS01895  372489 ..  372518 +  -2.7   -4.8622   AGGAGCTCGTCCCCA       CGGGGACTGGCTCC CGA GGGATCAG-CCCAG       TTTTTCCTTCAGCAG  77 118
CXD94_RS01915  377144 ..  377172 +  -4.5  -3.35679   GGCGCGGCCCGCGAA       GCAGCTGCGGGC AGGCAG GCCCG-GGCTGA        TTATCCATGCAACGA  51 79
        mreC NONE
        mreD  378602 ..  378627 +  -3.9  -3.09492   GACGACGTCGAATCT         TCCG-CCGTCTG ATC CGGGCGGGCGCA         TGTTCGAATTCAAGA  45 14
        mrdA NONE
        rodA  382183 ..  382230 +  -4.6  -3.61715   CCCTGCGCATCGATC AGCGCGC-CGTCGGGGGCCGG CTCGCCC CTGGCCGCCAGCACGCGCGCC TTGTTGACCGCGATC  54 496
CXD94_RS01965  388306 ..  388344 + -11.9  -4.42788   TGGTGGCCCAGAACT  TCACCA-GCACGACCTTGC CGC GCA-GGTCCTGCATGGTGA  TTTTCTGGCCTTCGA  88 498
        rsmI NONE
CXD94_RS01995  392078 ..  392112 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS02005 NONE
CXD94_RS02010 NONE
CXD94_RS02015  395370 ..  395401 + -15.9  -4.25104   GGCTGAGCGCCGGCC      CGGGTGCCTGTCC CCGCGC GGACAGGCACCGG       TTTTCCTGCGGGGAC  95 35
        trxB  402145 ..  402155 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS02050  403436 ..  403457 +  -8.7  -3.18582   GCGCCACCAGGCCCA           CCGCCTGCGT ATC GCGCAG-CGG           TTGGTAGCTGAGCTG  56 269
CXD94_RS02110 NONE
CXD94_RS02115  416060 ..  416074 +  -2.7  -2.62184   TGACGCCAGGGAACT               GGCGG GCACG CCGCA               TGGTCTGAGCAGAAG  39 38
CXD94_RS02120  417473 ..  417483 +  -5.4  -3.37533   AGAAGAACGCGTGCA                 GGAA GCG TTCC                 TTGATGGTTTTGGGG  49 438
CXD94_RS02135  418877 ..  418932 +  -9.8  -3.13403   CCAGCACCAGCCAGA GGC-T--GCGCCGC-GCGTCGGCAAAGCG CGC CGCCTGGCCG-CGCAGCGGCGCGTACGCC TCTTCGTCGGCCGCC  60 53
CXD94_RS02150  422136 ..  422146 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 54
CXD94_RS02155  423275 ..  423312 + -10.6  -3.53224   GCCGGTCATGGAGCA  GCC--GGCCAGGCGC-ACG CGC CGTTGCGCCCGGCCACGGC  TTTCGCGCAGCGCTA  70 123
        gltS  424572 ..  424583 +  -4.4  -3.16881   GCCGTTCGTGGGAGG                CATG TGAC CATG                 TTCATCCGCTGGCTC  47 19
CXD94_RS02165  426516 ..  426530 +  -2.1  -3.14931   GATCACGATGCCCGC              GCC-TC CCTT GATGGC               TTCGTCCAGGCTGGC  43 455
CXD94_RS02195  432364 ..  432392 + -10.3  -2.57026   TCTGGATGGGGGAAA       GCGGCCGGC-CGG GCTTG CCGTGCCGGC-GC       ATTGGTGTCACTCTA  57 65
CXD94_RS02230  438828 ..  438872 +    -4  -2.87132   GGCGTGGCGCGGGGG CCGCCGGCGGATGACGCCGCG GCCG CGCGGCGGCAA-TACCTGCGA TGTATCGGCCGACCC  43 12
CXD94_RS02235 NONE
CXD94_RS02240 NONE
CXD94_RS02245  442165 ..  442210 +  -8.9  -3.32769   GACGAAGTTGGCGGT GGTCGGCGTGGCGTT-GTCGGG ATG CACGGCCAGGGCGATGCCGACC TTGATGGTTTCGGCC  59 105
CXD94_RS02255 NONE
CXD94_RS02260  445437 ..  445459 + -10.4  -4.69622   CCTAGCGTCGTCCGC           ACGCCGCGCC GCC GGCGCAGCGA           TTTTTCCCCTTGTCT  93 36
CXD94_RS02265  446893 ..  446908 +  -2.6  -4.08216   CAGGAAGCGCGACAC              CATGTAG TAG CT-CATG              TTTTCCACGCAATAC  58 233
CXD94_RS02295  452838 ..  452853 +    -6   -3.5774   TTACCGCTCAAAGCG              CCGCGG CGAA CAGCGG               TTTCCACGATTCGAT  56 63
CXD94_RS02325  462152 ..  462173 +  -5.7  -3.30771   CCCGCTCAGGACATC           GGTAAGCGC CGCG GCGCTGCCC            TTGTACGGAATGTGC  51 409
CXD94_RS02350  465610 ..  465639 +  -7.7  -3.14132   CTGCCTGAGCGCCGC       GAGCCGCTCGCCG CACA CGCCCAGCAGCTC        TTCGTACACCCCGGC  54 33
CXD94_RS02360 NONE
CXD94_RS02365  467977 ..  467997 +  -3.1  -2.77192   CAGCACCGAGCCATA            GAGCAGCGG CTG CTGCAGATC            GTTCTTGCCGGCCTT  39 97
CXD94_RS02390  474972 ..  474998 + -23.8  -4.79223   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 34
CXD94_RS02435 NONE
CXD94_RS02440  486532 ..  486569 +  -8.3  -3.28924   CCATGTCCAGCGAGG   CGTCGTCGGGTACCTGG CCGG CCAGGTAGGCCACGCCG    TTGTAGACAGCCATG  59 441
CXD94_RS02455 NONE
CXD94_RS02460  489182 ..  489225 +  -3.1  -4.58685   GGTCGAAAACTACTG GTAATCCCCCCTATGGCAGGG GGAA TCC-GCCATGAGGGGG-TCGC TTTTTCACAACATTT  71 22
        phaZ  490580 ..  490595 + -11.8   -4.2687   GCGCGCTCCCTGCAA              CGGGCC GCCT GGCCCG               TTTCTGCTTTTTACG  91 48
        rsxB NONE
         nth  491969 ..  491983 +  -3.4  -3.88985   ACATCGTGGGAAACA               CCGTGG AAA CCCTGG               TTTCTGAAGCGTTTT  56 108
CXD94_RS02480 NONE
CXD94_RS02485 NONE
CXD94_RS02490  494912 ..  494922 +  -8.2  -2.52516   AACCTCCTGAAGGAA                 GCCG ACA CGGC                 CTTGCTCATCCGGCA  51 39
CXD94_RS02495 NONE
CXD94_RS02500 NONE
CXD94_RS02505 NONE
CXD94_RS02510  498827 ..  498861 + -30.1  -3.09516   GCTGACCCGCGCGCA     CGCTGGCGGCGCGGC GCCAG GCCGCGCCGCCAGCG     TTCAGTCCTGGGCGC 100 36
        msrB NONE
CXD94_RS02550 NONE
CXD94_RS02555 NONE
CXD94_RS02560  507271 ..  507300 + -19.5  -4.13767   AGCCATCGCCATCAA       CAAAATTGCCCGC TTTC GCGGGCAATTTTG        TTTTCGGCTGCCGGG 100 47
        lplT  515880 ..  515908 +  -6.5  -3.74747   CAGCAGGGCAATCTG        GCGCCGCAGGTAG GGA CTGCAGGCGGCGA        TTTCCTCGGGCTTGG  61 278
        ompR NONE
CXD94_RS02600 NONE
CXD94_RS02605  520083 ..  520093 +  -4.6  -3.10677   TAGCGTAGAATTTAG                 GGCT TGA GGCC                 TTGCCTGCCTTAATT  47 38
CXD94_RS02610  520690 ..  520706 + -10.8  -3.95584   GCTGTAATTTCCCCG              GCCCGG CTCGT CCGGGC              TTTCATTGCTCCAGA  79 34
CXD94_RS02615  521270 ..  521322 + -15.5  -2.79188   AGCGCCCCCCGCGGT GCGCCGGCCTCCCCCGCCGGCGGCCG CAGC CGGCC-CCTGCGCGGG-G-CCGGCAC TCATTCCCTTCCCTC  75 40
CXD94_RS02625  523966 ..  523982 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD94_RS02645 NONE
CXD94_RS02650  527708 ..  527734 +  -8.7  -3.53012   ATCCAGCTCGAATAG        GCGCGCCCGC CCCGGCCT GCG-GCGCGC         TTTGGCGCACCGCAG  62 26
CXD94_RS02655  528779 ..  528815 +   -16   -4.2558   GGCGCCTGCCCATTG   CGCGCCAA-TCCCGC CCAATCAA GCGGGAATTGGCGCG    TTTTCCTGGACAATC  95 41
CXD94_RS02660  529694 ..  529704 +  -2.4  -3.01497   AGTAAGGCGGCCGGA                 GCGG GAA CGGC                 TATGCTTTCGGCTGC  41 84
CXD94_RS02665  531106 ..  531138 +  -3.2  -4.72272   CGGCCGGCGCACGCC     GCCGGCGCGCGCCGG CCCT CCGGTTC-CGCCCCC      TTTTTCGTGGAGAAC  75 476
CXD94_RS02675 NONE
        argF  533421 ..  533443 +  -6.3  -2.58714   AAGCGCTAAAATGCC           CCGTTAGAC TTCTT GTTTGACGG           TCCGTTGCTGTCAAA  46 112
        argG  534838 ..  534867 + -23.7  -4.08394   GCGGCAACCGCGCGA       GGGTGCCTGTCCC TGCC GGGACAGGCACCC        TTTTGCCGCAGGTGT 100 41
CXD94_RS02750  547891 ..  547927 + -20.4  -3.34398   ATGGCCTGCCTTCAT   GAAAGCCCCGGTCAATC GCAT GATTG-CCGGGGCTTTC    TCTTTGCCGCGCCGC 100 60
CXD94_RS02760  548841 ..  548863 + -12.7  -5.63517   TGATGTGCCCAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGCC 100 65
CXD94_RS02770 NONE
CXD94_RS02775  551806 ..  551816 +  -4.6  -2.92371   CCAGCCAGCCGTAAA                 CCGG CAT CTGG                 TATGGTTGCCTCCAT  44 53
CXD94_RS02780  553550 ..  553560 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS02785  554783 ..  554815 +  -3.2  -3.05844   CCATGTTGCTCGACC      CGACCGTGGACCAC ACGCC GTCGACCACCGCCG      TCTTGGCGTGCAACA  43 244
        egtD  558238 ..  558252 +    -7  -2.71011   GCGCCCGCCACCCAC               GTCCGC AGC GCGGCC               TGCTTACCCGCCCGT  48 366
CXD94_RS02810  559419 ..  559450 + -20.4  -4.37886   CCAGAGAATTCAAAA      CAAAATGCCCGCAA TCGC TTGCGGGCATTTTG       TTTTGTGCGCGATGA 100 38
CXD94_RS02825  560901 ..  560941 +  -5.8  -3.58536   AGGCTGCGCCAGTCT  ACCGCCGCGGCCGGCGCG CCATT CGCGGGGACTGAGGCGGC  TTTGGCCGTCAATTT  57 309
CXD94_RS02835  561655 ..  561710 + -13.9  -4.11216   CCAGTCTTGCCTATT GATGCCCTGCGCG-CCCTATCGTGGA CATAT TCGGCGCCAGGGCCGCGCAGGGCGAC TTTTAACCGTAACGG  85 77
CXD94_RS02840  563196 ..  563206 +  -8.2  -3.14132   GTCCGGCCAGCACTA                 GCGC GGC GCGC                 TTCGTCAGCGGCCGG  56 25
CXD94_RS02870  569090 ..  569109 +  -8.6  -3.68222   TGCCTATATGCATAT            TGTGAAGC GCGT GCTTCGCA             TTATTCAGATTCGCA  65 139
CXD94_RS02875  569425 ..  569446 +  -3.6  -3.86015   ATCCCGGCGGTCCGG           CGGCC-GCC ATCCG GGCTGGCCC           TTTATCCGCCCAATA  57 65
CXD94_RS02880  570589 ..  570603 +  -2.7  -2.69151   TTCCTGCCAGGAGTG               CGGCG ATGAG CCCCG               TAGTATCTGAAGCCA  40 82
CXD94_RS02885 NONE
CXD94_RS02890 NONE
CXD94_RS02895 NONE
CXD94_RS02900  574472 ..  574487 +  -7.5  -2.87132   CCGGTCTCGCCGCCC              CGGCG GCAAGG CGCCG               TATCTGCGAGGGGGG  52 139
CXD94_RS02905 NONE
        groL  576717 ..  576740 + -19.6  -4.86621   CTTCCCAAAAAAAAA          CCCCGCCAGG TTCG CCTGGCGGGG           TTTTTCATTGGAGCT 100 87
CXD94_RS02920 NONE
CXD94_RS02925  581472 ..  581485 +  -9.5  -3.53012   TCGTCCTGGACTGAG               CGGCG GCGC CGCCG                TTTCCAAGCGCGCCG  64 27
CXD94_RS02930 NONE
        pyrF  583674 ..  583709 + -20.4  -2.59748   TAAGAACGTAACCCC    CCGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCGC     TGACTTCTCAGGGTG  95 30
CXD94_RS02970 NONE
CXD94_RS02975 NONE
        phnD  591315 ..  591352 + -11.3  -3.02511   GGCCCGCGTGCGCGG   CCA-GTCGCTGCGCCG CGCGCGC CGGCGCATCGGCATGG   TGTTCCAGGAGTACA  62 261
CXD94_RS02990  592498 ..  592529 +  -6.7  -3.78329   TCAATACCTGGATGC      GGCGC-TTCGAT CCGGCCGAC ATCGAACGCGCC      TTTCAATTGCTCGAC  64 101
        phnE NONE
        phnE  594748 ..  594768 +  -3.9  -3.59979   TCAATTTCCGGGTTA            GCTTTGGGT ACT ATCCTAGGC            TTTCGGCTCGGCGGG  51 167
CXD94_RS03010 NONE
CXD94_RS03015  596626 ..  596644 +  -2.2  -3.53091   CCGGTGAGGGTGATG             GCGGCGTC GAA GGCGCGGA             TTTGCGCCAGCGCGT  47 262
        rsmD NONE
CXD94_RS03030 NONE
CXD94_RS03035  599105 ..  599129 + -15.7   -3.9941   CCTCCCCCCCTCGCG          GCGCGCCGG CCTGTCA CCGGCGCGC          TTTCGTTGTCGGCCA  91 59
        benE  600288 ..  600314 + -12.2  -3.57144   GGCCTACGACGGCCA         GCGCACCTCGGC CAT GTCGGGGTGCAC         TTTCAGGATCCGGCA  74 45
CXD94_RS03055 NONE
CXD94_RS03060  604472 ..  604488 + -13.7  -4.72272   CGCCTCAGAAAAAAA              GCCCTCC GCT GGAGGGC              TTTTTCGTGGGCCGC 100 49
CXD94_RS03070  606841 ..  606883 +  -3.3  -3.66874   TCGCCGTCGGTCAGC CTGAGCACGCGCGCGCGC GCCTGATA GCGC-CGCGCATAGTCGG TTTCGATGCGGTTGA  51 504
CXD94_RS03105  617099 ..  617113 +    -7  -3.41636   CGCCGACGTTCCGGG               CGCGCC CTC GTCGCG               TTCCTTGCCTTGCTT  56 172
CXD94_RS03110 NONE
CXD94_RS03115  619188 ..  619231 + -10.9  -2.57344   ATCAACCTCAACTGA CGGCA-GCCCG-GCGGGCGGC CCCG GCCGCCCCCACTGCCGTGCCG ATTGTCGCAAGACTG  59 26
CXD94_RS03120 NONE
CXD94_RS03125  621790 ..  621800 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 110
CXD94_RS03130  622983 ..  622996 +  -3.7  -2.71791   CAGGCCCTTCCTGCA               GCGGG CCGG CCGGC                GTTTCAACAAGACCT  41 204
CXD94_RS03140  623269 ..  623297 +  -3.8  -5.55769   CCAAACACCAAAAAG       GGAAGC-TAGCGG TTAC CTGCCGTGCTTCC        TTTTTTCTTGTAGCC  95 38
CXD94_RS03145  623401 ..  623420 +  -6.3  -3.94877   CTCCAAACACTTCAA            GGCCCGC CGCGTC GCGAGCC             TTCTTGTTCCAGGAT  64 35
CXD94_RS03150  623886 ..  623905 +  -7.1  -3.14468   CGTGATCCGGCCGTA            GCGCG-GC CCGGC GCGCGCGC            TTGCCTATAATGGCG  52 25
CXD94_RS03155 NONE
CXD94_RS03165 NONE
CXD94_RS03170  626595 ..  626607 +  -4.7  -3.54424   ACTGCCCTGGCTGGC                CGCCG ACA CGCCG                TTTCCCCCGGTCGAA  52 50
CXD94_RS03180  628105 ..  628142 +  -3.2  -3.00923   GCCGCCCTGAGCACG   CGCGGGGCGGCAAAGT CGATCT ACAATTCCGCCCCATG    TCTATCCTCTTCCAC  42 31
CXD94_RS03185  629213 ..  629225 +  -6.2  -4.74103   CCCGAGCGGGCATGG                GCCC CAAGA GGGC                TTTTTGCCTTGGGCA  82 49
CXD94_RS03195  631321 ..  631356 +  -8.8  -3.54424   GCGCATCGCGCGGCC    CGGCCGGCCGATCGGGC GAG GCCTGCGCGCCCG-CCG    TTTCGCGGAATGCGA  62 67
CXD94_RS03225  640194 ..  640211 + -10.5  -3.21218   TGCCAGTTGGCGCTT             GGGCGCG TTGC TGCGCCC              TTCCTGCTCGGGCGT  60 82
CXD94_RS03245 NONE
CXD94_RS03250 NONE
CXD94_RS03255  644681 ..  644693 +  -2.6  -3.07816   CGTCTCCACTAAGGG                CGGG TGGAT CTCG                TTGGCTGCCTCCAGA  41 29
CXD94_RS03260  646082 ..  646100 +  -6.7  -3.77832   TGTTGCGGCGCGCAT            C-CACCGG GTGG CCGGTGCG             TTCTTCGCTTTGCGC  61 313
        galU  648597 ..  648615 +  -4.4  -2.71924   GCGCTCGGTAAAGGC             GATGACCG CGC CGGCCACC             ATTTGCGGCGCCATG  40 299
CXD94_RS03290  652780 ..  652806 +  -9.5  -2.62184   CAGGCGCGCGCGCCG        GCTG-GCT-CGGC GGC GCCGAAGCGCAGC        TGCTGTACCGCCGGG  55 143
CXD94_RS03305  656677 ..  656691 +  -2.8  -4.09685   CGGAAAAGCGGCGCG               TGCC GGACAGG GGCA               TTTTAGGGGCTGGCG  59 521
CXD94_RS03315 NONE
        dusB NONE
CXD94_RS03325 NONE
        purH NONE
        ruvC NONE
        ruvA  662210 ..  662258 + -10.8  -3.30124   CGCGACCGCCTCCAG CGCGGCGGGCGGCGC-G-GCCAAC CCC GAGGGCGCGGCGCCGCTGGCCACG TTGTCGCGCGTGAGC  66 83
        ruvB  665567 ..  665601 + -14.9  -4.84359   GGTCGATGGGGTCGG    GCCGCGC-GCGGGCGC CCGC GCGCGAGCTGCGCGGC     TTTTTCTCGGCCTCG 100 272
CXD94_RS03370 NONE
CXD94_RS03375  669691 ..  669726 +  -9.1  -3.03124   AACGCATCGTAGTCC   TGCATCCAGGCGCGC CATTGCGC GCGCGCCTGG--GCA    TGTTCACGCATGGCC  55 336
CXD94_RS03390 NONE
CXD94_RS03395 NONE
CXD94_RS03400 NONE
CXD94_RS03405  674749 ..  674792 +   -21  -3.53091   CTACAAGATAGACTG ATCCCCGGGTGCCTGTCCCC GCAG GGGGACAGGCACCCGCTGAC TTTGCCCGCCAGGCT 100 25
CXD94_RS03410 NONE
CXD94_RS03415  677344 ..  677357 +  -2.4  -4.10144   CCTTGATAAAGCGCG               CGAT GCGCGG ATCG                TTCTTGTTGTCTTCA  58 151
CXD94_RS03425  679328 ..  679338 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS03430  680829 ..  680855 +  -5.9  -4.14243   TAGAGTGGGGTCTCT        GCAACACGTGCC CCAG GGCAC-TGTTGG         TTTTGCGCTGGAGTG  66 512
CXD94_RS03460  684621 ..  684634 +  -5.9  -6.06723   CACAGGATTGATCAA               CCGCT TTCG GGCGG                TTTTTTTTTCGCCCC 100 468
CXD94_RS03465 NONE
CXD94_RS03470 NONE
CXD94_RS03475  688013 ..  688047 +  -2.6  -2.74012   TCGGCACGCCATCGA     CCTGGTGCGCTACAGC AAC GGGGTGGTGCGCCGGA     TCATTGCGCTGCTGA  38 50
CXD94_RS03480 NONE
CXD94_RS03485  689372 ..  689396 + -15.7  -4.67038   CCTTCTTCTTTCTAA          GCCCTGCTGGC CGA GCCAGTGGGGC          TTTTGCTTTTGGGGC 100 77
CXD94_RS03490  690206 ..  690224 +  -3.9  -3.28924   GGCCGGCTTCGAAGG            CGACTTCC TCCA GGAA-TCG             TTCTACCAAGCCATC  47 186
CXD94_RS03505 NONE
CXD94_RS03510  692368 ..  692385 + -10.5  -3.65351   GCCGATTGACGGTTG             CCCCTGC TCAC GCGGGGG              TTTCCGTCAGCCTGC  70 43
CXD94_RS03515 NONE
CXD94_RS03520 NONE
CXD94_RS03525 NONE
CXD94_RS03530 NONE
CXD94_RS03535 NONE
CXD94_RS03540  694858 ..  694871 +  -9.5  -5.46657   GGGCGCAACTGGAAC               CCGCC ACAT GGCGG                TTTTTTATTGCCCTC 100 69
CXD94_RS03545 NONE
CXD94_RS03550 NONE
CXD94_RS03555 NONE
CXD94_RS03560 NONE
CXD94_RS03565  699249 ..  699269 +  -3.1  -5.32944   ATGAGTAATCCCGAA            CGCCGGGAT CTC GTCGCGGCA            TTTTTTCATTATCCG  89 33
CXD94_RS03570 NONE
CXD94_RS03575 NONE
CXD94_RS03580 NONE
CXD94_RS03585 NONE
CXD94_RS03590  704781 ..  704793 +  -6.2  -5.80817   CCAATGAATGAACGG                GCCC ATAGG GGGC                TTTTTTTGTGTTGAG 100 30
CXD94_RS03595 NONE
CXD94_RS03600 NONE
CXD94_RS03605 NONE
CXD94_RS03610 NONE
CXD94_RS03615  707564 ..  707584 +  -9.7  -3.54741   GAACAGCACGCGGTC            GCCAGCC TGAAAGC GGCTGGC            TTTCACCAGCTGCTC  64 405
CXD94_RS03630  708215 ..  708225 +  -8.2  -2.78216   GCACGTCGACCATGC                 CGCC CAG GGCG                 TCGTTCGTGACGATG  52 235
CXD94_RS03655  712097 ..  712115 +    -3  -2.65264   GGCGGGCGCCAGCCC             GCCCCG GCAGCCA CAGGGC             TCCTATCGATCGTGA  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB  716030 ..  716049 +  -2.8  -2.54325   CAACGTGGGGCCCTT            TTACCCGT TAAC ACGTGTGA             CTCTCTTTGCAAAGG  39 15
         pal  716600 ..  716629 + -21.5  -4.54727   AGCAGCCCCACCACG       CGTCGGGACGGTC ATCC GGCCGTCCCGACG        TTTTCGTTTCAGACC 100 56
        ybgF NONE
CXD94_RS03695 NONE
CXD94_RS03700  719280 ..  719307 + -10.5  -4.15453   ATAGGATGAGCACCT        CGC-CCGCCGCC AGCCC GGCCGCGGCGCG        TTTTCCGCTGACTTC  78 120
CXD94_RS03705 NONE
CXD94_RS03710  720677 ..  720688 +  -2.2  -3.21099   CCGGCCCTGCACTAC                GCGCG CCA CG-GC                TTCCTGGTCACGCCC  42 465
CXD94_RS03720 NONE
CXD94_RS03725  722792 ..  722846 +  -2.5  -2.70932   GCGCGCCAGCAGCCC GCCGGTCCAGGCCCGGCCCCAGGCCC GCAA GGTGTTGGCGCCGG-CGTGGCCCAGA TGCTTCCAGAACAGG  38 500
CXD94_RS03735  725956 ..  725970 +  -4.2  -3.64703   TGCGCGACATGATCA               GCGG CGTGTGC CCGC               TTTCGGTCAGCGCGA  51 297
CXD94_RS03745  728454 ..  728466 +  -9.1  -2.52464   GCCGCCAGCAAGGCG                TCGGC CAG GCCGA                TGAATTGCGCCACGC  51 100
CXD94_RS03765 NONE
CXD94_RS03770  735135 ..  735151 +  -2.2  -3.53012   CAAGGAGGCTGCAAC              GCGGTA TCCTC TACCAC              TTTGGCCCGAAGACA  48 94
CXD94_RS03775  736274 ..  736293 + -16.4  -3.15147   TCCGCCAGCCGGCAT            GGGCGGCG GACG CGCCGCCC             TGTCTATTGCTTGAC  81 388
CXD94_RS03800  739768 ..  739782 +  -3.4  -4.07687   CGCGCTTGGCGTCGG               CCTCGG AAA CCGGCG               TTTTCGCCGCCCGGT  60 247
CXD94_RS03835  749010 ..  749024 +  -2.1  -3.84406   CGCTCGCGCAGCGAC               GATTG CGGGC CGATC               TTCTTCTGGTAGGCG  56 430
        nspC  751935 ..  751954 +  -4.2  -3.18366   AGGATTACGTAGACA            GCCTG-TCC TGA GGAACTGGC            TCTGTTGATTGAAGC  45 15
CXD94_RS03855  753338 ..  753348 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 119
CXD94_RS03860  754457 ..  754483 + -10.1  -3.06133   TGCCGGCAGCGCAAC         GCTGTGGCCGT TTCGT ACGGCTACCGC         TTCAATCGAACATTC  60 130
CXD94_RS03865  755164 ..  755207 +  -2.8  -3.91897   GCATCACCATCGAGG CGGTCGCGGAAGCGGCGCGC TGAC GCCGGCCGCGTTCCCTACCA TTTGTACGTGACCCG  58 3
CXD94_RS03880  759862 ..  759878 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD94_RS03900 NONE
CXD94_RS03905  764543 ..  764571 +  -7.9  -3.07113   GGCCACGGCGGCAGC        GCGCGCGGCGGCG CTT CGCCACTGCCCGG        TTCCATCAGGTAGTA  52 295
CXD94_RS03915  766165 ..  766199 +  -8.5  -3.06183   TCGGCCAGCCATTGC     TTGCGCGCCGACC ATACCGGCA GGACCGCGCGCAA     TTCCGTGCCGATGCA  55 501
CXD94_RS03940  770599 ..  770619 +  -8.2  -3.12999   GCCGGGTATGAGTGT            GCGAGCCG CCGGC CGGCTCCC            TTACCTGTCGGATAC  56 101
CXD94_RS03945 NONE
CXD94_RS03950  771809 ..  771834 + -13.3  -5.15969   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG 100 108
CXD94_RS03960 NONE
CXD94_RS03965 NONE
CXD94_RS03970  778431 ..  778465 + -13.5  -2.99947   CATTGGGCGCCGCAC    GCCTGGCATCGGCGGC GCCG GCCGGCGAGGCC-GGC     TATCTGTGAAGATTC  70 152
CXD94_RS03980 NONE
CXD94_RS03985  781993 ..  782008 +  -7.5  -3.14211   GGTGCCCCGGCCTCG              CGGCG CGTATC CGCCG               TTGCTCGCGCGCAGT  54 62
CXD94_RS03995  782957 ..  782978 +  -2.1  -3.07291   CTGAGCGCTACACAC           CGGTTGCGT CGGT GCGAATCCG            TTCAATCGACTACTT  41 161
CXD94_RS04000  788143 ..  788171 +   -11  -3.31779   AAGCGCCGTGAATCA       CGGC-CCGCC-TGC CTC GCGCGGCGGCGCCG       TCTCTTTGCGTTCTT  66 40
CXD94_RS04005 NONE
CXD94_RS04010 NONE
CXD94_RS04015  793091 ..  793115 +  -2.7  -3.59979   CGCCTAAGGAGTAAC          CCTGCAAATCG CCG CGTTATGCAGA          TTTCGCATAACCGGC  49 27
CXD94_RS04020 NONE
CXD94_RS04025  795171 ..  795187 +  -6.5  -3.54424   ATATCAATGGAACTG              GGGCG TGCTGTT CGCCC              TTTCCCCGGATGGCG  56 129
CXD94_RS04035 NONE
CXD94_RS04040  797364 ..  797380 +  -7.9    -3.273   CCGTTATCCAATACT              CAGGCGG TAG CCGCATG              TCTTCCCTTTTCTAC  56 41
CXD94_RS04045  798710 ..  798723 +  -2.3  -3.44848   CGCTGTTGACGTAGA               AGACG TGGA CGTCC                TGTTTGGTGAAGCCC  47 497
CXD94_RS04070  803341 ..  803360 +   -15  -3.14564   CCGGCGAGCAAGCCC            CAGGCGGC GCCG GCCGCCTG             TTGCTCCCGCCATGG  76 151
CXD94_RS04075  804711 ..  804729 + -10.2  -3.04461   GTCGCCGGCGCGCAG             CGCGGCGA GGA TCGCGGCG             TGTTCGGCCTGGGTC  59 182
        pepN  820420 ..  820432 +  -3.3  -2.74192   AAAGCCTTGGATCTG                GCTGC TTA GGAGC                TACTCTTGAAACGTA  40 17
CXD94_RS04145  821623 ..  821657 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS04170 NONE
        serB  828158 ..  828180 +  -6.1  -3.16039   TCGCGACGGCCTCCC           GCCGCCCGG CCGGC CCGCGCGCC           TTACTCCGGCTGCTT  51 131
CXD94_RS04185 NONE
CXD94_RS04190 NONE
CXD94_RS04195  833323 ..  833339 +    -3  -4.11484   CATCGATTGCGGCTC             CAGCACC AGCC GGT-CTG              TTTTCAGCACTTGCC  61 509
CXD94_RS04295 NONE
CXD94_RS04300 NONE
CXD94_RS04305 NONE
CXD94_RS04310 NONE
CXD94_RS04315  857538 ..  857554 +  -2.1  -3.05384   GCTCATGCTCGCGCG              TTGACGC GCA GCGCCCA              TTCGGTGACGGCCAC  41 22
CXD94_RS04350  864811 ..  864844 +  -6.9  -3.09516   GGTAATCTCGCTTTG     ACTAATTATCCAAGA ATAT TCTTTGATAATTAGG      TTGCGTCATGAAAAG  52 108
CXD94_RS04355 NONE
        mexI NONE
CXD94_RS04365 NONE
CXD94_RS04370  871474 ..  871484 +  -3.2  -3.28712   GCGTATCGCCGGCCT                 TCAG GTA CTGG                 TTGTCCAGGCCCGCG  47 239
CXD94_RS04385 NONE
CXD94_RS04390 NONE
CXD94_RS04395 NONE
CXD94_RS04400  879415 ..  879466 + -12.9  -2.53876   CGATCGCCTCGGTCA GGAACTGCGGCGCGTCGCCGCGCA GCCGG TCCGCGCCCA-GCGCCGCGGTGCC TCCCTTCAGGTAGGC  62 232
        lrhA NONE
CXD94_RS04430  886944 ..  886962 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 303
CXD94_RS04465  895936 ..  895973 +   -12  -3.05816   ACTGGGTAGCCTGCC   GCAGCGACGCGAAC-GC GTGCA GCTGTTCGAGGCGCTGC   TTCCATGAGCGCTCC  66 470
CXD94_RS04495  901448 ..  901458 +  -4.6  -4.07568   GGGTGCACCATCAAA                 CGGC ACC GCTG                 TTTTCCCCAGGCCCG  62 31
CXD94_RS04500  902522 ..  902561 +  -2.8  -3.90291   TCGACCACGGTCTTC  TCGATTTCCAGCAGGACCA CGA TGG-CATGCTCGATATCGC  TTTCGTTGACCAGCT  56 434
CXD94_RS04510  904645 ..  904655 +  -4.6  -3.36327   CGGCCGCCTCGACAT                 TGCG CGC CGCG                 TTGTAGATGCGCTGG  49 255
CXD94_RS04535  909087 ..  909101 +  -2.1  -2.50816   AGCCCCAGCGGCCGA              GG-TCC TGCA GGATCC               ATTCGTAGATGACCA  37 520
CXD94_RS04565  915450 ..  915461 +  -7.2  -2.52623   TGCGTGGCCCCGGGC                CGCC CGTA GGCG                 ATGTTCTCGGCCAGC  48 497
CXD94_RS04575  917866 ..  917882 + -11.5  -2.77013   GAACGCCTGGGCTGA              GCGCGGC GAT GCTGCGC              CTTGTTACCGACATC  62 26
CXD94_RS04580 NONE
CXD94_RS04585  918373 ..  918392 +  -4.2  -4.00042   GACTACCCCGATACC            GGCCGT-TG AAC CGCGCGGCC            TTATTTGCTGCGCAC  59 17
CXD94_RS04595  920411 ..  920425 +  -7.1  -2.70932   AAGGTCAGCGTGCTG               CCGCT GTCGA AGCGG               TAGTTCAGCGCCGGC  49 365
CXD94_RS04610  923306 ..  923334 + -16.9  -5.53288   CGGCCAGACCGGAAA        TCCCATGCAGATC ACT GATTTGCATGGGA        TTTTTTTCGCTTCGG 100 59
CXD94_RS04615  926444 ..  926502 + -29.8  -3.25072   TTTCATCCCCTGTCC TGAAGC-CGGCCATCCGGCCG-CCGCGGC GCAA GCCGCGGGCGGCCGGATGGCCGCGCC-CA TTCCGTTCTCCTCCC 100 49
CXD94_RS04620 NONE
        accB NONE
CXD94_RS04630  929987 ..  930007 +  -3.9  -2.93853   AACACATTTCGTTCA            CGCGACC CTGAACC GGTCCCG            GTTTCGTTGCCACGG  43 15
CXD94_RS04635 NONE
CXD94_RS04640 NONE
CXD94_RS04645 NONE
CXD94_RS04650 NONE
        accC NONE
CXD94_RS04665 NONE
CXD94_RS04670  937062 ..  937080 +  -6.7  -4.11216   CACCCGCCGACGTCG            CGCGTTGC AGCC GCA-CGCG             TTTTGCAAGTAACGG  67 137
CXD94_RS04675  937402 ..  937417 +  -3.2  -3.10775   GTTATCGTCGCGGTT              GCGC CACCTGGA GCGC               CTTTTGCATGCGCGT  44 105
CXD94_RS04680  938628 ..  938640 +  -6.3  -2.88544   CGAAATCCTTTACAA                TTTGG CTA CCAAA                TGTGTAGGAGTGGAC  48 93
CXD94_RS04685  938884 ..  938905 + -17.3  -3.84451   TTGAGGGGCGCGCGA           CGGGCAGCC GGCA GGCTGCCCG            TTTGCATTTCGCCCG  95 37
CXD94_RS04690  939365 ..  939375 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 73
CXD94_RS04695  940437 ..  940473 + -15.7  -3.14132   CATGCCACCGGCATC    CGGCCGCTCGTCGACCT GCA AGGCCGTCAGGCGGCCG    TTCCTGCACGGGCCG  77 82
CXD94_RS04710 NONE
CXD94_RS04715  944611 ..  944623 +  -9.1  -3.17075   GGCCTATGCGCCGCA                TCCGG TGG CCGGA                TTCGCTTAGCCGCCG  59 4
CXD94_RS04730  947147 ..  947180 +  -5.8  -3.62046   CTGCCCGGGCTGCTG     CACGCGCGCGGGCG CGCCGT CGCTGGGGCGCATG      TTGTTCAGGAAGTCG  57 255
CXD94_RS04755  953824 ..  953834 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS04760  955105 ..  955156 +  -9.2  -3.21099   GGCCGGAACGTCGGG CAGCG-CCGGCGAGCGCTTGCGG CTCGTGA CGGCCAGCGCGCGCAGGTCGCCG TTCCTGATCAGCGGC  56 292
CXD94_RS04770  957058 ..  957089 + -11.6  -2.81133   TACCCACGCAAACGA      GAGCCCCGATACGGA TTG TCCA-GTCGGGGCTC      TCTGCTGGGTGCGTC  63 238
CXD94_RS04780  958860 ..  958885 + -18.3  -4.55798   TTAACAAACTATTTT         GCCCCGCGCGA GGTG TTGCGCGGGGC          TTTTCATTTCCCCTC 100 291
        gyrA NONE
        serC NONE
        pheA  968367 ..  968418 +  -4.5  -4.84761   GGCGTGGTTGACGCA CACCA-GGCGGCCGCCGTGACGGA GCGTGTG TCCGTC-CGGCG-CTGCCATATTG TTTTTCTGCAGGTAT  82 47
CXD94_RS04835 NONE
        aroA  970662 ..  970675 +  -3.1   -3.6692   GCGGGACTGAACGGC               GCC-TG CCC CATGGC               TATTTTCGCATCCGC  53 31
CXD94_RS04845  971344 ..  971354 +  -6.8  -3.91984   TCTGGTGCGCCTAGC                 CACG GCG CGTG                 TTGTTTCGGCAGTAT  66 27
CXD94_RS04850 NONE
CXD94_RS04855  973648 ..  973677 + -16.6  -5.00616   TTGGTGTTCTACCGG       CAAAGCCCCTTG CTTGTT CAAGGGGCTTTG        TTTTTTCGGGCCGGC 100 67
CXD94_RS04860  974146 ..  974160 +  -3.4  -3.56092   TACTTCCTACCGAGA               GCCCGC GCT GTGGAC               TTTGAACCCTGGTGG  49 59
        lapB NONE
       rfaE1 NONE
        rfaD  977306 ..  977330 +  -4.2  -3.40597   CTGAAGTAGCGGATT         TGC-CCCGGGT AATT GCCCGGGTGGA          TGTTTGCGTGCACCG  49 32
CXD94_RS04880  977953 ..  977963 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS04885  979011 ..  979033 + -14.1  -3.78934   GCCAGCGCGGCTAAA           CCGCCTCGG CCGAT CCGGGGCGG           TTATTATCGGCGGCA  83 69
        cysM  980295 ..  980344 +   -17  -3.01712   CCAGCGGCGCCGGAT CGGCCGGCAGCGCGACCGGCGCG AACAC CG-GCAGGCCGCGCTGCCAGCCA TGTTCGACCAGGAAG  82 361
CXD94_RS04900  982127 ..  982142 +  -7.5  -3.08006   ATTGTGCAATGCGGT              CCCGG GTTTCG CCGGG               TAATTATTGTTATTT  54 53
CXD94_RS04905 NONE
CXD94_RS04910  983876 ..  983895 + -16.4  -5.75945   CACGCAGAGAGAAAG            CCGCGGGC TGTC GCCCGCGG             TTTTTTTTCGGCCAT 100 52
CXD94_RS04915 NONE
CXD94_RS04920  986664 ..  986679 + -11.8  -5.86332   CCGCTTCGGCGAGAA              CGCCCC GCAA GGGGCG               TTTTTTTTGCCTTGG 100 46
CXD94_RS04925  987937 ..  987953 + -11.5   -3.5944   GCGCGGCGCCAGCGC              CCCGGCG TAT TGCCGGG              TTTCGGCATCTCGAT  72 95
        cysA  991007 ..  991040 +  -5.1  -2.71712   CCTCGGCGTGCTGGA     CGCGGTGGCCACGCGC TAC GGGCGCG-CCATCACG     GTTTACCGGCCCGAC  45 264
        cysD  992779 ..  992790 +  -3.6  -3.90048   GGCATCACCATCGAT                GTGG CCTA CCGC                 TATTTTTCGACACCC  59 330
CXD94_RS04960  995291 ..  995311 +  -4.5   -3.6215   GCCAGTGGTAGGGGG            CCGCGCCCG TCG CGGCAGTGG            TTTGACATGCATTCG  52 80
CXD94_RS04965  995831 ..  995846 +  -4.6  -4.62069   CCAGGCAGCCAGCCA              GTCGGC CTAT GCCTAC               TTTTTCCCGTAGCAG  75 86
CXD94_RS04975  997392 ..  997443 + -22.6  -2.87132   TTTGTGTCTGGCACG GCTTTCCGCAATAAAAGGGCACCC GCAA GGGTGTCCTTTTATTGCGAAAAGA TATCTGGAAGAAAGC 100 81
CXD94_RS04980  998307 ..  998324 + -14.1  -5.14563   ATTCCCGATCAGTAC             GGCGCGC CGTG GCGCGCC              TTTTTTCATCCCGGC 100 60
CXD94_RS04990 1000690 .. 1000708 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 244
CXD94_RS05010 1004541 .. 1004573 +  -3.4  -3.80733   AGCGGCCGCCGCCGG      CCCGGCGATT AACGCAAATTTAA AAACGCCGGG      TTATTCTGGCCTGCC  56 69
CXD94_RS05025 NONE
CXD94_RS05030 1010853 .. 1010883 + -25.6  -3.55444   CGCGGCCGTCCAAAA       CAGACAGGCCGGCA AGA TGCCGGCCTGTCTG       TTTGCGCAGTGGCGA 100 46
        aceE NONE
        aceF NONE
        lpdA 1024010 .. 1024033 + -18.2  -2.52464   CGCGGCATGGCAGCA          CAAGGGCCCC TCGC GGGGCCCTTG           TGCGTTGGCGCGGCG  85 45
         tkt NONE
         gap 1031553 .. 1031595 + -21.4  -4.07568   CTGAACAGGGCGCAA GGGCCAGGTTGGTTTTCCCG TCA CGGGGAAACGGATCTGGCCC TTTTCGCAGGCAGGC 100 51
         pgk 1033040 .. 1033055 +    -6  -3.01712   TCGAAGCCGGTGATG              CCCGAG GCGG CGCGGG               TCTTGAGCGGCCCGG  48 227
CXD94_RS05155 NONE
CXD94_RS05160 1042978 .. 1042994 +  -2.1  -3.01712   TCTCTTGCTACCCAT              GCCATGC GCA GCAAGCC              TATTGACGCGCCCGG  41 68
CXD94_RS05165 1044356 .. 1044390 +  -6.3  -3.64487   GCTGCAAGTCGGCGC    GCTCGCGCG-CCGGCA GGCC TTCCAGCCGCGCGACC     TTCTTGGCCGTGTCG  59 456
CXD94_RS05175 1046256 .. 1046281 +  -3.9   -4.7416   CGCCGCCCGGCAATA         GGGCGTGCGCTA TAG TGG-GCGCGCCG         TTTTTCAGATTTTCA  77 25
CXD94_RS05180 NONE
CXD94_RS05185 1047741 .. 1047751 +  -8.2  -3.02511   GCCGAGGCCGAACGC                 GCGC CGG GCGC                 TGTTCAGCCGGTCGG  55 264
CXD94_RS05200 1049742 .. 1049766 +  -7.8  -3.93369   TGGCACACGCGCGCC          TCGGTGACGT TGAGC ACGGCGCCGA          TTTCCTTGAGGTTCA  67 436
        flhD NONE
        flhC 1051760 .. 1051800 +  -4.6   -2.7386   AAAAGCACCAGAAAA CCCCCCATAACCCG-CG TTTTTGCC CGACGGGTCAGGGGGGA  TCATTGGCGTCGGTT  43 64
        motA NONE
        motB NONE
CXD94_RS05230 NONE
        cheA NONE
        cheW 1056684 .. 1056706 + -12.7  -3.90856   TGACGGCGGTCAGTC          CG-CGGGCGG TGCG CCGCCCGTCG           TTTCGTTCAACGCTT  82 38
CXD94_RS05245 1058767 .. 1058802 +  -7.5  -2.82516   ACTTTCCCATCCTGG    CCGATTTC-GCGCGCC AGCGC GGCGGGCCGGTATCGG    TGTGGTGCTGCGCCG  52 341
CXD94_RS05255 1060361 .. 1060400 +  -2.1  -4.43909   CGACCGCGGGCATCG CGTTT-GACGCCCCGGTCC CAAC GGAGCGG-GCGTCCGGACA  TTATTTTCTTGGAGT  67 19
        cheY NONE
        cheZ 1061631 .. 1061649 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 206
CXD94_RS05290 1064610 .. 1064633 +  -6.6  -3.68351   TGATGCCGGTGTTGG          TGGCG-GCCAC CAT GGGGCGCGCCG          TTTCCATGGTGCGCA  61 231
        dacB NONE
CXD94_RS05360 1080252 .. 1080266 + -11.4  -6.34424   CCGCCCACAGGAAAA               CCGCCT TGC AGGCGG               TTTTTTTTTTGCCGC 100 59
CXD94_RS05365 1081622 .. 1081646 +  -3.4  -3.34398   CCCTGGCCTGCGGGG         CGGGACCGGGC ACAG GACCGG-CGCG          TGTTTCGCGCACGAC  46 77
CXD94_RS05390 1088164 .. 1088207 +  -8.6  -2.66316   GATTACGCAATTGAA GTAGCACCCCGTAGCACGCG GGGG TGCGTGGCGCGGGGCGCGGC TGGTATGATGAACGC  52 22
CXD94_RS05395 1088562 .. 1088614 +  -7.4  -3.66999   GCCTGCTGATCAGCC GCCGCTGATCACGGCGGGGCGGGC CGCGC GTCCGCCCCGGCATGCACAATGGG TTTGCGTAGATCGGT  63 18
CXD94_RS05400 NONE
CXD94_RS05405 1089505 .. 1089526 +    -5   -3.7282   GGGCGTGCCCCATTC           GCGGCTGG TTTCGC CCGGCCAC            TTGTTGGTGGCGTCC  58 146
CXD94_RS05415 1092282 .. 1092302 +  -3.1   -4.4017   CCAGCGTGGGCGCGC            AGATCGCCA GGC TGGCGGCCA            TTTTCTCGACCTTGG  68 422
CXD94_RS05430 1094053 .. 1094069 +  -4.4  -3.27704   GTAGCATCTTTCCGG             CG-TGCG CTGC CGCATCG              TTCACTTTCGCAGCT  49 89
CXD94_RS05435 1096652 .. 1096666 +  -3.4  -2.62184   GGCGGCTGTGGGCCT               CGCTGG AGA CCGGCA               TGGTGTACCGGGCCG  39 283
CXD94_RS05445 1098261 .. 1098295 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 221
         ppx 1107317 .. 1107351 + -21.4  -2.52464   CCTGAAACCCGATCT     CCGGGAGCCTGTCCCC GAA GGGGACTGGCTCCCGC     TGACTTCCGGGGAGC 100 36
CXD94_RS05515 1114154 .. 1114179 + -10.3  -3.53012   GCGATAGTACTTGAT         CTGGCCGGCCT GGAC GGGCCCGCCGG          TTTCAGGCGGGCCGC  67 34
CXD94_RS05520 1115641 .. 1115655 +  -5.6  -3.02144   CCGACGCGCAGGGCA               TGAGCC TGG GGCCCA               TGTTGCGCGGCCTGG  47 419
        dusA 1119199 .. 1119233 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS05565 NONE
CXD94_RS05570 1123727 .. 1123737 +  -3.2   -3.7614   GACTGGGCAGCTGGG                 CTGG AAG TCAG                 TTGTTCGTCCTGATT  56 2
CXD94_RS05575 1124768 .. 1124799 +  -9.4  -3.03243   CCAGTCCGCTGCCGG      GCGTTTCGCGGTGGG CGG CCCGCCG-GTAATGC      TCTTCGAAGATCCGT  55 174
CXD94_RS05585 NONE
CXD94_RS05590 1129594 .. 1129616 +  -5.5  -3.72324   CGCCGGCTGGCGGCG          CA-GGCGGCC TGAT GGACGCCCTG           TTCTTCCTGGAGGTG  57 14
CXD94_RS05595 1130697 .. 1130716 +  -6.4  -3.73775   GGCTATACCGGGCTG            GTCAGCCTG GGG CAGGC-GGC            TTTCATGGGCCTGGG  59 239
CXD94_RS05605 NONE
CXD94_RS05610 1133304 .. 1133318 +  -3.5  -2.78384   TCAAGCACTACAAGC              GCC-GC AAGC GCTGGC               TGTCATGACGCGCGC  41 3
CXD94_RS05615 1135213 .. 1135234 +  -2.9  -3.12351   GCAGGCAGGTGGCGG           TG-CGTACCG GCG CGGTCCGGCG           TTGCGTATCCAGCGC  44 50
CXD94_RS05620 1136378 .. 1136415 +  -7.6  -2.73364   CGAGCGCGCGGATGT   AGTCGGCGTCGAAGTA CATGGC TTCTTCGTCGCCGGCG    TCCTTGGCCTCGACC  49 504
CXD94_RS05655 NONE
        lolD NONE
CXD94_RS05665 1145255 .. 1145286 +  -4.2  -3.78775   CAGGGCGGCGACGCC      CTGACGCCCGGCCGT CCG GCG-CCGGGCCCCTG      TTTCCTCCTGCCCGC  57 22
CXD94_RS05670 1148854 .. 1148878 + -12.8  -6.34424   TCCGCCCGTTGTTGG          CCGCCTGTCG TGTAT CGACTGGCGG          TTTTTTTTTTGCCGC 100 109
CXD94_RS05675 1149377 .. 1149395 +  -3.8  -3.60762   GTAGGCGAAATCCTC             GTCAAGTC AGC GACTTCGC             CTTTTTTGGCCACTC  51 187
CXD94_RS05680 1153443 .. 1153471 +  -9.4  -2.87132   ACTAAGCGCCGTAAG        ACGGGGGGCGCC GATGG GGCGCCTCCCAC        TGTCTGGCGAGCAGG  56 36
CXD94_RS05690 NONE
CXD94_RS05695 1158124 .. 1158138 +  -2.7  -3.02263   CGGAGCGCGGCGAAG               CCGCG CTACC CGAGG               TCTTGCAGGACCTCT  42 53
CXD94_RS05700 1159029 .. 1159052 +    -8  -3.09015   CGCGCCTTTCGCGCC          GGGCCGTTGG CGCC CCGGCTGCCC           TTGAATCCCTATGCA  54 43
        greB 1159849 .. 1159883 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 241
CXD94_RS05735 1167264 .. 1167282 +  -5.2  -4.42081   CAGGCAGGGAAGCGG             GCCGCAGT AAA ATTGCGGG             TTTTCCCTTTATGTT  72 16
CXD94_RS05745 NONE
        odhB 1173847 .. 1173903 + -12.9  -3.74693   GAAGAATGCCTTCTT CTGTCGCTGCCGCCAAGGGCCGGGCCGC CATC GCGGCCC-GCCC--GGCGGCCCTGCCGG TTTCGTCGAATCCGG  79 58
        lpdA NONE
        zapE 1176749 .. 1176765 +  -3.5  -3.14132   TCGGAAGCCAGGAAG              GCCACCG TGG CGGCGAC              TTCCTCCGGCAGGCC  45 114
CXD94_RS05770 1178587 .. 1178621 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS05805 1184134 .. 1184162 + -19.6  -2.53876   CGGGGCAACGACGCA       GGCGCCGCACCCG ATGA CGGG-GCGGCGCC        TGCGTTGCGATCAGC  93 67
CXD94_RS05815 1188807 .. 1188825 + -11.6  -3.91911   CCGCGCAAAAGGAAA             ACCCGGCC TGG GGCCGGGC             TTTCCTTGGACTGCG  81 44
CXD94_RS05825 NONE
        pgeF NONE
        phaC 1193210 .. 1193229 +  -4.8  -3.61894   CGGTTTGAGTACGCG            CGCGGGCC GCAA GGCCGGCA             TTCTTGGCGGGCGTT  52 33
        phbB 1194026 .. 1194054 +  -9.6  -3.04263   CGCATTCGGAGGGGG       CCGGG-GTCCG GGGGGAAG CGGACGCCCGG        TATTACACGTAAAAT  57 44
        phaR 1194712 .. 1194731 + -16.4  -4.24204   CTGGCTGAAGGAAAA            GGGGCGCC CACG GGCGCCCC             TTTTCCGTATGAGTC 100 52
CXD94_RS05850 NONE
CXD94_RS05855 NONE
CXD94_RS05860 NONE
CXD94_RS05865 1198026 .. 1198040 +    -7  -2.79183   CATCTGGTAGCGCGG               CCACGC GCG GCGCGG               TATGGTGGCGGTCCC  48 31
CXD94_RS05870 1199014 .. 1199024 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS05875 1200118 .. 1200140 + -11.9  -2.50816   GTAGCCCGGCCCATA           GCGCGCCCG CGGTC CCGGCGCGC           CTTCGTCGCTGCCGC  58 115
CXD94_RS05900 NONE
CXD94_RS05905 1205441 .. 1205459 +    -3  -3.58396   GCAGGCATTGCCATA             CGCACTGG GCA CGAGTGGG             ATTTTTAATTTCACG  49 56
CXD94_RS05910 1207127 .. 1207143 +  -6.5  -3.39895   CGCGGAACCAACATG              CCGGC CCACAAA GCCGG              TTCATTGCTACACCG  55 167
CXD94_RS05915 NONE
CXD94_RS05920 NONE
CXD94_RS05930 1211798 .. 1211810 +  -3.3  -3.35679   GGCGAACGGCTCGAC                CACCA GAT TGGGG                TTGTCGATGGGCAGC  47 465
CXD94_RS05940 NONE
CXD94_RS05945 NONE
CXD94_RS05950 1214924 .. 1214959 +    -9  -3.14132   GCACGACGGCCAGCG   CTGAGCCGG-CCGGCG CGCCTA CGCCGGGCCAGC-CAG    TTCGTCGGCCAGCGC  59 22
CXD94_RS05960 1217270 .. 1217287 +  -5.5  -3.34398   AGACGCTGCCTGTAA             GCCGC CGACCGTT GCGGC              TATTTGGCCGCGCCG  51 86
CXD94_RS05980 1219862 .. 1219902 + -16.2  -2.71011   TATTGACAGTTCACA  GCTAGCGCGGCGCTAT CCGCATACC ATAGCGCCGCGCCGGC  TCGTTGCCAAGGCAT  77 21
CXD94_RS06025 1227745 .. 1227791 +  -5.1  -2.97188   GCTCGCGCGCATCCC TGGCG-GATGCGCGGGC-CGG ACCGGCC TCGAGCCTGCGTGGCGCGCCA TGTCTCGTCCTGTCC  47 111
CXD94_RS06030 1228681 .. 1228727 +  -5.1  -3.29461   GGATCGGCGCGGCCG CCCT-GGATGCG-CAGGCATAGC GCC GCGGCGCATGGCGTATCCTAGGG TTATGCAAAGACTTC  51 6
CXD94_RS06035 1228978 .. 1229019 +  -4.3  -4.08216   TGCTCGGCCAACGGG CCG-CTGGGCAGGGTGCCGT CTT GCGACATCATGGTCAGCCGG TTTTCGCCGACCTGG  60 73
CXD94_RS06045 NONE
CXD94_RS06050 1231024 .. 1231064 +  -6.6  -2.78596   CCGGGCTACCATAGG CGCAGCCATCCGGCGGCCG CCAT CGGCCGCCCGGCG-CACCG  TATCGTCACGAGGTA  47 111
CXD94_RS06055 NONE
CXD94_RS06060 1231664 .. 1231687 +    -3  -4.07568   CTGACCTTCTGCGCC          GCGCCGGC GATGGTAA GCTGGCTC           TTTTCCGCGCGGCCG  59 37
CXD94_RS06065 NONE
CXD94_RS06070 1232909 .. 1232938 +  -7.7  -3.21395   GCCCCCGCGCCAGCC       GC-GTGGCGCCTTG CGC CTCGGCGCCGCAGC       TCTTGTCCAGCAGCT  53 277
        clpB 1237549 .. 1237572 + -13.2  -5.48063   CGCCGCGTCTCTCAA          CCCCTGGATCC AAT GGA-CCAGGGG          TTTTTTCTGTTCGCT 100 69
CXD94_RS06095 1239310 .. 1239339 +  -4.9  -3.05384   CGGCGATCGCGTGAT       CAGC-GGGATCCTG CAG CAGGACCTCGGCAG       TTGGCTGGCGCCGGA  45 123
CXD94_RS06105 1243389 .. 1243422 +   -11  -2.68942   GCTTGAGGGTGTCGA     CGCGATGC-CCGCGC ACCAG GCGCGGCGTATCGGG     GTTCTGTCCGGCGCT  59 388
CXD94_RS06115 NONE
CXD94_RS06120 NONE
CXD94_RS06125 1246566 .. 1246598 +  -9.7  -3.05463   GTCAGGCGCGGCTGT      TGCGGCCGGCGGG GCGGCAG CCCGCCGGCAGGG      TTGCCTGCCGCACAT  57 47
CXD94_RS06135 1249050 .. 1249071 +  -8.6  -5.47218   GGCCAGGTGCTGCGC           GCCGGCGC CTGAGC GCGCCTGC            TTTTTTTCCCTACGC 100 14
CXD94_RS06140 1250420 .. 1250435 +  -7.5  -3.14132   GTTGCGCCCGTGGCC              GGCGC TGCGGC GCGCC               TTGATGAGGGCGCGC  53 377
CXD94_RS06170 NONE
CXD94_RS06175 1256409 .. 1256420 +  -7.2  -4.15565   ACATGTTTCGTGGGC                CCGC CTGG GCGG                 TTTTACGGTACTCAA  67 77
CXD94_RS06180 NONE
        crcB 1257380 .. 1257422 + -13.2   -3.6502   GGCTGGGGCTGGCGA CCGTGCGCCTGCTGTTGCGC TGA GCCCGGCGGCGGGCGCCAGG TTTCAGTCCGGCGTG  79 3
         alr 1261718 .. 1261741 +    -8  -2.56596   GAGCATTGTGCGGAT          CGCCGGCGGG CCGG CCTGCTGGCA           TGAATTGCTACGCAA  50 39
CXD94_RS06210 1262762 .. 1262784 +  -5.5  -4.45399   AGGCCGGATCGTCAC          GCTGGC-GCG CTGA CGCCGCCAGA           TTTTCCTGTTGCTGT  72 215
CXD94_RS06220 1264522 .. 1264568 + -12.9  -2.73875   GCTCGATGGCCAGTT GCAGCCGGCGGCGCTGCTG GAACTCGGA TAGCCGCGCCTCGGGCTGC TCGTGTTCGGCGGCG  63 213
        radA 1268199 .. 1268209 +  -4.6  -3.13299   CGTTGATGGCACGTC                 CGGG GAG CCTG                 TCTTGAGTCTGCTGG  47 35
CXD94_RS06240 1269079 .. 1269099 +  -6.7  -3.58905   CAACGAATTATAGGT            CACGCGGCA TTT TGCCGCGCC            TTGTATGTGCGGGCT  58 119
CXD94_RS06245 1269641 .. 1269662 +  -2.1  -3.53012   CATCCTCCCAGCAGG           CCGACGCCGC CCA GCGCCA-CGG           TTTGCAGCACCAGCG  47 295
CXD94_RS06280 NONE
CXD94_RS06285 NONE
        maiA 1277619 .. 1277640 + -17.3  -5.67063   GCGCCCAAGCAAAAA           GGGCAGCCC GGAT GGGCTGCCC            TTTTTTTCTGGTGCC 100 45
CXD94_RS06300 1278024 .. 1278045 + -12.3  -5.09762   CGTCGACACAAAAGG           GCCGTTCAC GCAA GTGAGCGGC            TTTTTGTATTGCGCT 100 77
CXD94_RS06310 1280029 .. 1280049 +  -6.7  -4.14392   TGGGCGACGATCACG            GTCACGGGC GCG GCCAGTGTC            TTTTCCAGGTTGCCG  69 417
CXD94_RS06320 1281362 .. 1281388 + -12.2  -3.85698   ATCAAGACATTACAG         CCGGCCTGGCGT GCG ACGCCAAACCGG         TTTGTCCGGGCGGCC  81 92
        scpB NONE
CXD94_RS06335 1285547 .. 1285566 +  -9.3     -6.13   GGCCAGGCAATACGG            TGGGCTG GGCGTG CAGCCCA             TTTTTTTTTGAGTGT 100 453
        rimP NONE
        nusA NONE
CXD94_RS06350 NONE
        rbfA 1291047 .. 1291076 +    -5  -2.60341   TGTTCCCGACGAGCC       CGAAGACCAGTCC TGACC GGGCTG-TCGTCG       CTGCTTTTTCTCCTT  42 10
        truB NONE
        typA 1293719 .. 1293745 + -22.4  -4.65895   GCGGTGCCAGCGCAA         GGGTTGTGGCCG TGG CGGCCACAACCC         TTTTTACATGCAGCC 100 66
        polA 1298430 .. 1298455 + -17.5  -2.69151   GCGCACTGATGCGGC         CCCGGCCGGCG TCCG CGCCGGCCGGA          TACTGTCTGACAGCC  80 32
CXD94_RS06390 NONE
CXD94_RS06395 1300221 .. 1300246 + -21.9  -2.52676   ACCTGTAGCGGGCCG         GGGCCTGCCCG TGCT CGGGCAGGCCC          TCAGTTGCCCGCGTC 100 33
CXD94_RS06405 1303559 .. 1303610 +  -7.2   -4.8048   ACAGGCACGCCGGGG TTGGAGTTTGCGGGTGCCAGTCCCC TGC GGGGACAGGCACCCG-GGGTTAGAG TTTTTCCTCTACCCC  84 117
CXD94_RS06435 NONE
CXD94_RS06440 NONE
        parC 1317766 .. 1317781 +  -8.2  -3.22475   GTGCGTCCCAGGCAG              CCGGTG CTGT CGCCGG               TGTTCTGAGCGTGAA  58 2
CXD94_RS06450 1319172 .. 1319206 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS06475 1322828 .. 1322856 +  -8.7  -3.29144   TGACCAGCAGGTTGG        CGCCCGTGTCGTG CAG CACCACCCGGCCG        TTCTCCAGCACGTAG  59 157
        ugpB 1332001 .. 1332031 + -21.1  -3.18118   TTGGCCTGTGCCTGT       AGCGGCCGGCCGG CATTA CCGGCCGGCCGCC       TGTATTCTCACCTGG 100 145
        ugpA NONE
        ugpE NONE
CXD94_RS06540 1335028 .. 1335061 + -17.3  -3.44325   GCCGCAGCGGGGACA     GGCGCCCGTGCGCGG CGAG CCGCGCGCATGCGCC      TTACTTGTACGACGT  87 102
CXD94_RS06550 1337070 .. 1337080 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS06555 1338250 .. 1338290 +  -3.1  -3.06261   ACAGAAGATGCCCAC CGCGACGCAGGCGATGCCG ACCAG CGGCGAGGCG-GCG-CGCG TGTTCGCGGTTGCGA  42 191
CXD94_RS06570 NONE
CXD94_RS06575 1339903 .. 1339961 +  -2.9  -4.56597   CCCGCGGCAGCCTGA TCCCCTTGCCGGGCGCAGGGCTAC-CGGC CCG GCCGCGCGGCCC-GTGCGGCACAATGGGA TTTTTGGCGCAAGGC  69 76
CXD94_RS06580 1340843 .. 1340875 +  -9.7  -3.06671   GCAGCCCGGGCGCCA      TGGCGGTGCAGCGCG TCA CGCCCAGCATGGCCA      TGTTGCGGTCGATCT  59 67
CXD94_RS06640 1350584 .. 1350612 + -10.1   -2.9348   GACGCGCAGCACGGC        GGCTAGGGCGCGG CGA CCGCGCCACACCC        TATGTAAAATTTACA  59 20
CXD94_RS06645 NONE
        arsC 1352672 .. 1352703 + -24.5  -3.90112   TGAGGGCGAGTGATT      GCGGCCTGGCGCG GCAAGA CGCGCCAGGCCGC       TTTCGTTGACGGCCG 100 70
CXD94_RS06685 1357913 .. 1357944 +   -10  -2.81547   GGGCCAGCGGCAACA      GGCGCTGCGCGGCC TGGC GGTCGTCCAGCGCA       TAGTTGATCTGCAGG  56 306
CXD94_RS06715 NONE
CXD94_RS06720 1363480 .. 1363523 +  -8.3  -2.51133   CTGCACGTGATGCAG GCGGTCGAGG--CGCAG-TCCA GCG TGGAGCTGCTCACCTCGATCGC GTTCGTGGATGACTC  51 258
CXD94_RS06765 1383423 .. 1383480 +  -7.7  -3.07113   CTGTCGTCCACATAG CGCAG-CGCGG-C-GGGCGCCGCGGGGCT CACG AGCGGCGC-GCGCCCTGGCCCCGGTTGCG TTGGCTGGACTGATC  53 66
CXD94_RS06790 1387814 .. 1387837 +  -8.8  -3.53012   CGGCGAACAGCCGCC          GCAGCTGGCGC CCT GCGCCATC-GC          TTTGCGGCGCCGGGC  61 350
CXD94_RS06815 1390879 .. 1390911 + -12.7  -2.73875   CGCCTGGCGCGGCGC     GGCCGGTCCTGCCC GAACTG GGGCCGGAC-GGCC      TGGTGTTCGCCGAGG  65 244
CXD94_RS06825 1394476 .. 1394508 + -10.5  -3.05963   TGTCGACCGTGCCCA     CGC-GCGCGCCGTC GGGCAG GGCGGCGCGCAGGG      TATTGACCTGCACGT  59 285
CXD94_RS06840 NONE
CXD94_RS06845 1400427 .. 1400442 +  -4.6  -3.41051   GAGATCGGCAATGGC              CTGGTG GAAG CGCCGG               TTCTCGTCGAAGTAG  52 291
CXD94_RS06855 NONE
CXD94_RS06860 NONE
CXD94_RS06865 1404915 .. 1404927 +  -3.3  -2.64243   AGCCCCGCAGGAGCC                GCGTC CAT GAAGC                TGCTGTCGCATATCC  39 16
CXD94_RS06870 NONE
CXD94_RS06875 1407475 .. 1407499 + -13.5  -3.21416   CGGCGGGCCGACGGC          GGTCAGGCTGG CGT CCAGCCCGGCC          TTGCTCATGGCGCTG  72 427
CXD94_RS06895 NONE
CXD94_RS06900 NONE
CXD94_RS06905 1413446 .. 1413482 +  -9.4  -3.02511   GAAGTAGCCCGTCGC   CGG-CGCTGGCTGTCCC TGCG GGGACAGATACCGTCCG    TCTTGGCCGGCTACC  57 34
        flhB 1419741 .. 1419780 +  -3.5  -3.67296   GGTGATGATCCTGCT  GGTGGCGATGTTCACGCG CAAGC CGC-TGGATTTCGCCGCG  TTTCCCTCGGTGCTG  54 199
        flgB NONE
        flgC NONE
        flgD NONE
CXD94_RS06980 NONE
CXD94_RS06985 1429770 .. 1429800 +  -2.2  -4.32034   CGGCCAGCTGATTAT       CAACGCGCGCGCCG AAG CGCCGCGCCAGGAG       TTTTCATCATGATGC  65 30
        flgG NONE
CXD94_RS06995 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 1436773 .. 1436798 +   -14  -3.05384   GTAGTCGGGAAATGG         CGCGCGCTCC CCTCGA GGAGCGCGTG          TTCGATGGAAAGCGG  72 57
CXD94_RS07020 1438664 .. 1438675 +  -2.2  -3.68853   GGGCGAAATGGCGGC                CGGA TAGT TCTG                 TTTGGCGGTTTTTGC  51 49
CXD94_RS07025 1440447 .. 1440482 + -22.6  -4.56597   CCAGGACGGGAAAGC    GGCGATCCGCCGCGGC CAGC GCCGCGCCGGATCGTC     TTTTTACAGGCAGCG 100 92
CXD94_RS07030 1442023 .. 1442038 +  -4.6  -3.78419   CGTCGGGTGCCGTCG              GGTGCC GCTG GGTGCC               TTGTATCTTTCCTCC  58 47
CXD94_RS07035 1443254 .. 1443280 +  -2.9  -3.90744   CAAGACGGTATCTGT        CCCC-GCGGG GACAGGCA CCCGAAGGGG         TTATTTGCCCGCCAG  58 45
        fliE 1456606 .. 1456627 +  -7.2  -2.88544   CCAGCAGCTCGGCCA           CCGCCGTG TAGAGT TGCGGCGG            TATATGGGCATCCAG  50 518
CXD94_RS07160 NONE
CXD94_RS07165 1463302 .. 1463318 +  -3.5  -3.31415   GACAACGGTTTCATC              GCCGCAC AGT GACCGGC              TTCGATTTCGTCGTC  47 14
CXD94_RS07170 NONE
CXD94_RS07175 NONE
        rpsB NONE
CXD94_RS07205 1472685 .. 1472719 + -13.5  -3.83144   ACGCGTCATCGTAGG    GGCCGGCCAGGGCGGG GCTT CCCGAACT-GCCGGCC     TATTTCTTGTCTTAC  83 40
CXD94_RS07210 NONE
CXD94_RS07215 1474060 .. 1474111 + -10.8  -3.10344   ATCATGACCGTATAA TTCCGGTTGAGGTATCGGGGCCGT ATCG ACGGCTCCGGTGTCGATATCGGAA TCTGTTCCGTACGCG  64 26
        uppS NONE
CXD94_RS07225 NONE
CXD94_RS07230 1477049 .. 1477077 + -10.1  -3.59979   TCATTCGCCGGCAAT        CTCGGCCTGGCGT GAC GCGCCGGGCCGCC        TTTCGCGTCCACCCG  67 11
        rseP NONE
        bamA 1480866 .. 1480899 +  -2.9  -3.72893   GTTACGCATGAAAAC     ATGGGAAATGGCCGG TTGC CCGGCCGTCCCGCAG      TTTAGTGGCACAATA  53 65
CXD94_RS07245 1481519 .. 1481529 +  -2.4  -2.64218   CTGGGCCGATAAGCA                 CGCC CAT GCCG                 GTTCTGCTGGACCCT  38 29
        lpxD NONE
        fabZ NONE
CXD94_RS07260 NONE
CXD94_RS07265 NONE
CXD94_RS07270 NONE
CXD94_RS07275 NONE
CXD94_RS07285 1489862 .. 1489882 +   -14  -5.40072   CGGCAGCAGGAAAAA            GCCTCGCC CTTGC GGCGAGGC            TTTTTTTCGCCGGGC 100 46
CXD94_RS07295 1491188 .. 1491207 + -10.6  -3.09015   CGTAACCATGACCTT            GCCCGCCG GCGA CGGCAGGC             TTCACTAGCTGTGAA  64 36
CXD94_RS07305 1493217 .. 1493240 + -17.4  -3.59979   CGTGAGGTTCGACCC          GGGCGCGCCG GCCG CGGCGCGTCC           TTTCGCGTCCGCGCC  89 36
CXD94_RS07310 1494434 .. 1494454 +  -9.7  -3.67622   GCGCTGGTTGACGCG            CGTGTCGTG CTT CAGGACACG            TTCCTTTTCGCGCTG  68 30
CXD94_RS07320 NONE
CXD94_RS07325 NONE
CXD94_RS07330 1496870 .. 1496883 +  -2.4  -2.62616   CTCGCCAACGACTTA               CGTT TACGTT AACG                TCATGTCGAGCGTCC  38 129
CXD94_RS07335 NONE
CXD94_RS07340 NONE
        mmsB 1500252 .. 1500268 +  -4.3  -3.08464   GGCCGGGCGGCCAGG              GCCATTC CGC GAGAGGC              TTGCATGCCTGATAC  47 50
CXD94_RS07350 1500697 .. 1500724 +  -6.8  -2.90075   TGACCGCGGTGCGGG        TGACGCCGCGTT GAAC GGCGCGGCGGCC         TATACTTGGCGCGCC  50 12
CXD94_RS07355 1501638 .. 1501672 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 204
CXD94_RS07380 NONE
CXD94_RS07385 1509185 .. 1509212 + -14.2  -6.15828   GCCTCGAACGTCCGC        CCCATCCACGGCG CCA TGCCG-GGATGGG        TTTTTTTTTGGTGCC 100 47
CXD94_RS07415 1515823 .. 1515833 +  -4.6  -3.07113   ACTCGCGAATAGGGG                 GCTC AGT GGGC                 TTGGATGACCTGGTG  45 156
CXD94_RS07420 1516134 .. 1516144 +  -2.6  -3.57144   CAGCGCTTGCAGATG                 TAAT CCG ATTA                 TTTCCAGGTGGCGCG  48 23
CXD94_RS07425 1517206 .. 1517225 +   -10  -4.07568   CGGCAGTGTCATAAT            CGGGGTTG ACCG TAACCCCG             TTTTCGCGCGAAGCC  78 27
CXD94_RS07430 NONE
CXD94_RS07435 1519176 .. 1519224 +  -8.6  -2.62184   GCCAGGCCGCCAAAT AGGCCGCGCGTTCAGGCCGGGCT GACG GGCGCGGCCAG-GCGCGCGATCG TGGTGTCCAGCGGCC  52 24
        apbC NONE
CXD94_RS07460 NONE
CXD94_RS07465 NONE
CXD94_RS07470 NONE
CXD94_RS07475 1526922 .. 1526939 +  -8.4  -3.29829   TGCTGCATGCGGGCA             CCGCAC CATGGC GTGCGG              TTGTCGGAAGCTATA  58 88
CXD94_RS07480 1527221 .. 1527235 +  -5.6  -3.13403   ACCACCCTCGTTTGA               TACCGG AGC CCGGCA               TGTTGCTGACCAAGA  49 26
CXD94_RS07485 1530701 .. 1530723 +  -3.2  -3.01712   GGCGCTGCTGGCCGG           CGACGGCGAC GTG GTGGCCGACA           TCTTCCGCACCCGCG  42 522
CXD94_RS07495 NONE
CXD94_RS07500 NONE
CXD94_RS07505 1532647 .. 1532697 + -10.2  -3.61398   GCCAGTAGCCCGGGC GGCAAGCCGCGCGGCGTCCGGCC GCCTCA GGCCGGGCGC-GTGCGCCGGACC TTCTTGCGCGCGAAA  67 33
CXD94_RS07520 NONE
CXD94_RS07525 1536303 .. 1536323 + -16.9  -4.07687   AGCACGAAATCCAAA            GGCCACGAG ACA CTCGTGGCC            TTTTGCACGGGGCGT 100 121
        leuC NONE
        leuD 1538572 .. 1538608 + -18.6  -3.37556   TGACGCGTTGCCTGC    CGGCCCGCCGTCCGCG TTGAT CGCGCGCGGCGGGCCC    TTGCCTTGTTTTCCC  93 38
        leuB 1539765 .. 1539781 + -10.1  -4.58685   CCACTGTGCGCAAGG              GCCGCGA TTT TTGCGGC              TTTTTCGCACAATTT  93 73
         asd 1541045 .. 1541101 + -11.8  -4.07568   CCTGACGCGCGGCGC CGGCGCGCATGGCAGGATACAAGGGCGCC CGCG GGCGCCCTTG--T-C-GC-AGGCGCGCCG TTTTCGACGGCAAGG  82 36
CXD94_RS07550 NONE
        truA 1543709 .. 1543721 +  -4.7  -3.61398   TTTACGCAAACGGTC                CGCGC TCA GCGCA                TTCTTCCACACCCAG  52 130
CXD94_RS07560 1544832 .. 1544848 +  -6.5  -3.53012   ATGGCGACGGTGGCG              CGGGG CAAATAA CCCCG              TTTCGACGCGACGCG  56 14
CXD94_RS07565 NONE
CXD94_RS07570 NONE
CXD94_RS07575 NONE
CXD94_RS07580 1548173 .. 1548193 + -15.5   -5.1101   TATCGAAACGGAAAA            CGCCAAGTC GCT GACTTGGCG            TTTTTTGCCTGATCG 100 62
CXD94_RS07585 NONE
        yaaA 1550256 .. 1550293 +  -3.4  -4.21812   CGCAAGCAGGCCTGA  CAGGACG-CGCG-ATGTC GGCA GGCTTACGCGTCTTCCTG   TTCTTTTCGCTCGGC  63 26
CXD94_RS07595 1551972 .. 1551986 +    -7  -3.72576   CGGCGTCGGCGCGCT               CGCCGG TCT CGGGCG               TTTCCTCGCCCGCCG  61 489
CXD94_RS07605 NONE
CXD94_RS07610 1555530 .. 1555564 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        thrS NONE
CXD94_RS07640 1560818 .. 1560854 + -19.3  -3.05463   CAGGCTGATCCCATC    CCCGGCCCGGTTGCCCT CGA GGGGCGTCCGGGCCGGC    TTGCGTGCGGCCCGT 100 33
CXD94_RS07645 1561910 .. 1561923 +  -3.1  -2.87243   GCCGGCTGAACTTGC               TGCTA TGAC TGGCA                TCGTTATCGTCGTGC  41 32
CXD94_RS07650 NONE
CXD94_RS07655 1562714 .. 1562740 + -10.8  -2.62735   AAAACCTCAGGTTCC         GGCAGCCCGC CGTCGGC GCGGGCTGCA         TCGTCTACGCGCTCT  59 42
        ptsP 1564535 .. 1564552 + -10.5  -5.64006   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT 100 47
CXD94_RS07675 NONE
CXD94_RS07680 1567700 .. 1567718 +   -16  -5.31275   GGGCGCGGCAATGCG             GGCAGGCC TTG GGCCTGCC             TTTTTTGTCGTCAAA 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
CXD94_RS07700 1570858 .. 1570868 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS07705 1572112 .. 1572152 +  -5.9  -3.29144   CGGGGCGGCCCTCGG  GATGCCGCGGGAGGTCATC CGT GATGTCGTGCCACGGCGCC  TTGTGGGCGACGTAG  53 265
CXD94_RS07740 1578046 .. 1578061 +  -7.5  -2.71011   GCGGAACAGGGACCG              GCGCG CCGTCC CGCGC               TGATTGCGAAGGGAT  51 7
CXD94_RS07745 1579312 .. 1579331 +   -15  -5.15634   CGCCCGCATGGAAAA            CCGGACGC GCGA GCGTCCGG             TTTTTTCATGGCCTC 100 72
CXD94_RS07755 1580923 .. 1580949 + -17.3  -5.26875   GCCGGCGCCGTCCAG        GCCCGC-CGCCC TTCG GGGCGCGCGGGC         TTTTTTCATTGGAGG 100 46
CXD94_RS07760 NONE
CXD94_RS07765 NONE
CXD94_RS07770 1581858 .. 1581876 +  -4.4  -2.77523   CCGTGCCCTTGCCGC             TGGCGCTC TGA GTCCGCCA             TGATCTTCCTGCGCA  43 15
CXD94_RS07775 1582459 .. 1582476 +  -9.1  -3.41836   AAAATAGCCGATTCG             CGGC-CGC CTG GCGGGCCG             TCTTTCCATCCCTAT  63 129
        purE NONE
CXD94_RS07785 1584202 .. 1584216 +  -3.4  -2.60075   GCGCTGGGCATGGCC               GCGCCG CTC TGACGC               ATTGATTCCCGCCGC  39 14
CXD94_RS07790 1585301 .. 1585317 +  -7.2  -2.62184   AACTCCTGATTGCCG              CGCCTG CCGGC CGGGCG              TAATCTCACGCGGAC  47 56
CXD94_RS07795 1586441 .. 1586478 + -10.5  -3.06162   CTAGGGCGAGGGCGG   CGGGGCGGGCAAGATCGC CAA GCGATAC-GCCTGTCCCG   TATTGCGGTACGCTA  60 37
CXD94_RS07800 1587382 .. 1587400 +  -5.9  -3.62518   GTATTTGATGGGAGA             GCAAGGG GAATA CCCTAGC             TTTCCGGATCTTTCG  59 50
CXD94_RS07805 NONE
CXD94_RS07810 NONE
CXD94_RS07815 NONE
CXD94_RS07820 1590770 .. 1590793 + -19.6  -2.75064   TGGGTTGAGCCCGGC          CTGCCGCGCG CGCC CGCGCGGCAG           TGGTTCCATGGCCGG  93 33
CXD94_RS07825 1592480 .. 1592510 +    -9  -3.89956   CCGGCACGCCGGGCG      CGATGCCGC-CGCG CAACA CGCGGGCGGCG-CG      TTTGGTCTATCCTGC  73 55
CXD94_RS07830 1593124 .. 1593163 + -12.1  -3.73072   GCACGCGGGGAAGTT  TGCCG-GTGCCAGTCCCC CTTGC GGGGACAGGCACGCGGGG  TTTAGTAGAAGGCTT  77 122
CXD94_RS07845 NONE
        xerD NONE
        ybaK 1598724 .. 1598746 +  -9.1  -2.94144   TCGTCGCATGACCAG          GCCGGCGCGT TACG GCG-GCCGGC           TCCTTTCCATGGAGA  56 100
CXD94_RS07860 1599354 .. 1599382 +  -5.2  -2.59564   GCACTGACCCCAATA       CGGGCTGTACGGCC GCC GGCCG-GC-GCGCG       CTTGTCGCCTGCCGG  44 34
CXD94_RS07865 1599854 .. 1599864 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS07870 1601328 .. 1601346 +    -3  -4.07885   CGGATAGTTGCGGCC             CAGCGC GTGGGCG GCGCGG             TTTTCCGAGGACATC  58 485
CXD94_RS07885 1604038 .. 1604052 +  -9.2  -3.28712   AACTGGGAAAACATC               GCCGCG CTG TGCGGC               TTCTAGGCCGCGCGC  61 187
CXD94_RS07890 NONE
CXD94_RS07895 1610653 .. 1610711 + -24.1  -2.71731   TGATGGGTCCGGTCG -G-GCCGGGGCTCGCCAGCTACGCATTCT GTT AGAATGCGTAGCTGGCGGGCCCCTTCGCA TGGTTCGGCGGTGAA 100 521
         ffs 1610822 .. 1610857 + -10.7  -2.70932   AGGGGCGCCGTGACC   GGAATGTATCGCGATCC AGGC GGATCGC-AT-CATTCC    TGGTTGCGGCGCCCC  60 54
CXD94_RS07905 NONE
CXD94_RS07910 1613426 .. 1613460 + -13.5   -2.6927   GCTGCCGTTCTGATA    TCGC-CTTGGCGGCCC AGCC GGGCCGCCGGGCGCGC     TGCTGTCTGCGCGAT  67 28
        recR 1614117 .. 1614127 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS07920 1615166 .. 1615176 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS07925 1616369 .. 1616398 +  -2.7  -4.13767   CGCCGTCCTCGAGTA       TGACC-AGGCGGGC GTT GCGCGCATCGGCCA       TTTTCACATCCGACA  61 214
CXD94_RS07945 1619417 .. 1619451 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS07985 1627085 .. 1627137 +   -11  -3.28791   CGCGCAGGCATGCTG CGCCGCGCGGCCATCCGGCGGGGCC GCAA GGCGCCGCCGGGCA-CCGCCCGATG TTATCCCCGGCAAAT  66 298
        mutS NONE
CXD94_RS08000 1632014 .. 1632035 + -15.9   -4.4078   GGGCAGGCATGCTAA           TGGCCTCCG GTAA CGGAGGCCA            TTTTCATTGCGCGAA 100 520
CXD94_RS08005 1632819 .. 1632842 + -18.2  -5.40474   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 50
CXD94_RS08025 NONE
        glnH NONE
        glnP NONE
        glnQ 1639297 .. 1639318 +  -8.8  -3.05844   GTGGAAACCGCGTCG           TCGTGCAT CGTGAC ATGCACGA            TATTGGCGTCGGCCG  55 165
CXD94_RS08070 1645119 .. 1645130 +  -4.4  -3.35679   GTTCGTGGGACGCGG                CTGA GGTT TCAG                 TTCTCGCTGGCGGCC  51 22
CXD94_RS08080 1647877 .. 1647887 +  -3.2  -3.89614   TTACGCTCGGCTTTG                 GTCA GAT TGGC                 TTTGTCGCCCTTGGC  58 441
CXD94_RS08105 1650640 .. 1650666 + -12.2  -3.05384   GCGCAGCGCCGCCAC         CTCGGCGTCGCC CGG GGCGGCGTCGAA         TTCGGTGAGGCCGGC  66 492
CXD94_RS08115 1652917 .. 1652933 +  -6.5   -4.8083   AACTTGCGGCCGCGC              TGTCGGC CAC GCTGGCA              TTTTTCGTGCTGTTG  82 139
        rdgB 1657060 .. 1657070 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS08135 NONE
CXD94_RS08140 1659424 .. 1659446 +  -7.6  -4.16842   CCAGGAGTGCGGGAC           CTGGCACGCA TTT TGCTTGCCTG           TTTATTGCCAGTCGG  74 133
        glnA 1660916 .. 1660968 + -22.1  -3.11634   ACTACAGCCTGTAAT CCGGGAGGCTGTGCGGCG-GCGGGCC TCGC GGCCCGCCCGCCGCGC--CGTCCCGG TTGCCTCCTATGACG 100 27
CXD94_RS08150 NONE
        ntrC NONE
CXD94_RS08165 1665352 .. 1665374 + -11.9  -4.56597   TGCCGTAAAGTGAGA           CGGGCGCCG CCAGC CGGCGCCCA           TTTTTCCACGGCGCG 100 33
CXD94_RS08170 1666516 .. 1666550 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 214
CXD94_RS08195 1672159 .. 1672172 +  -9.5  -5.27335   CGCCGCCAGGAAAAG               CCGCC TTCG GGCGG                TTTTTCTTTGGCCGC 100 48
        dkgB 1675653 .. 1675670 +  -2.6  -3.65351   GAGGGGTGGGCGTAT             TGCTGG ACAAGA CCGGCG              TTTCGCTGACGCTGG  51 478
CXD94_RS08220 NONE
        recG NONE
CXD94_RS08230 1681424 .. 1681450 +  -9.4  -3.14132   GGCCGGCGTGGCGAA        GCCC-GGCCGG AAATGC TCGGCCAGGGC         TTGCTCGACCACGCG  59 58
        mmsA 1683962 .. 1683991 + -18.6  -2.67316   GTTCGGGCTGAGCGC       GCGCCGGCGCGGC CGGGC GCCGCGCCGG-GC       TGCCTTGTTGCGTTC  87 30
CXD94_RS08245 1684578 .. 1684599 + -15.9   -5.4505   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 47
CXD94_RS08270 NONE
CXD94_RS08275 NONE
CXD94_RS08280 NONE
CXD94_RS08285 NONE
CXD94_RS08290 NONE
CXD94_RS08295 NONE
        tviB NONE
        tviC 1699902 .. 1699952 +  -2.7  -3.07816   GCCGCCATGCCCTGG TACACGCAATTCCTG-CG-ATGA TCGAGCT TCATTCGTCAGGCATCGCGCGTA TTCCGTACCTGACGG  42 5
CXD94_RS08310 1701987 .. 1702005 +  -5.2  -3.13403   GATGAGCCGGAGCAT             GGCATGAG CGC CTCGTTCC             TGTTCCTGCAGGGCG  49 36
CXD94_RS08315 1703183 .. 1703193 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CXD94_RS08320 NONE
CXD94_RS08325 NONE
CXD94_RS08330 1706744 .. 1706778 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS08395 NONE
CXD94_RS08400 1720132 .. 1720168 + -11.4  -3.01712   TATGCGCCCGATGCC    GTCGTGCGGGCGCTGG ACGCG CCGGCGCTGGCGCGCC    TGTTCGCGGCCAGCG  65 427
CXD94_RS08410 NONE
CXD94_RS08415 NONE
CXD94_RS08420 NONE
CXD94_RS08425 NONE
CXD94_RS08430 1726781 .. 1726807 + -22.3  -3.05384   GGCAAGTAGGCGCGG         GCGGGCGCGGG CGGGC CCCGCGCCCGC         TTGCGTCGCGCACGC 100 32
CXD94_RS08445 1729495 .. 1729542 +  -5.4  -2.73468   ACGGCGATGACCGCG TGCGCGGGCTC-CAGCCGGGT GCTCACG GTCAGGCGGCGCGCTCGCGCA TGCTTGAGGATATTG  43 191
CXD94_RS08460 1735310 .. 1735330 +  -8.2  -3.34895   CGATGGCGGCATCTT            GCCTTGGC GAATG GCCACGGC            TTGCTTCAGGCTGGC  59 267
CXD94_RS08480 1737436 .. 1737474 + -10.1  -3.65351   GAACCGGTCTGAGCG  CCGGGGCGGCGGCG-CCC GCAT GGACCGCCGCCGTCGCGA   TTTCCATGACGGTGC  67 29
CXD94_RS08510 NONE
CXD94_RS08515 1744132 .. 1744149 +  -6.3  -2.62184   GCGCCGTGCTCGACA             TCAACGGC GGC GCCG-TGA             TGCTCTGACACGCCA  46 0
CXD94_RS08520 1745559 .. 1745573 + -12.8  -4.15044   GTCGCACTGCGCCAG               CCGGGC GTA GCCCGG               TTTCTTCAGGCGCGC  86 383
CXD94_RS08530 1747503 .. 1747518 +  -5.4  -3.67597   CAGTCGGTGCCGGCC              GG-CCTG CCG CAGGGCC              TTGTTCCCTGGGAGC  57 286
CXD94_RS08540 1749238 .. 1749272 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS08580 NONE
CXD94_RS08585 1756801 .. 1756813 +  -4.8  -3.01712   CAGTACGATATCGTG                CTGG CGCGC CCAG                TCTTCCACCCCCGCG  46 363
CXD94_RS08595 1757823 .. 1757833 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS08600 1759310 .. 1759365 + -11.7  -4.07568   CCAGCGTATAGCCGT CCGGGGTGGCCTTGGCCAGCGCG-TCG GCGC CGATCGCGCCG-CCGCCGCCGCCGCGG TTTTCCACCACGACC  82 498
CXD94_RS08610 1762922 .. 1762935 +  -2.3  -3.01918   CGCAAACCGGGAGTC               CTGCC TGAT GGAAG                TCGTTTATGCCCTGG  41 18
CXD94_RS08615 NONE
CXD94_RS08620 NONE
CXD94_RS08625 NONE
CXD94_RS08630 NONE
CXD94_RS08635 1766070 .. 1766080 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 117
CXD94_RS08640 1767117 .. 1767142 +  -8.2  -2.70932   TATGGTAGAAAGGTC         AGCGGCAGGCC ATGAC GGCC-GCCGCC         TACTTCAAGGAGCGA  52 58
CXD94_RS08645 1767735 .. 1767750 +  -4.6  -2.84454   CGCATTCAGGCAAAA              TGTCGG CTGT CCGACC               CTTTAAGTCCTTTAT  44 90
CXD94_RS08650 NONE
        tadA NONE
CXD94_RS08660 1770115 .. 1770161 +    -7  -4.56597   AGCACACCCACTGAA CGCAGGCCCCGCTACGTGTCCT GCC GGGGCACCCAGGCGGGCTGGCG TTTTTCCAGGAAAGA  77 27
CXD94_RS08685 1776727 .. 1776770 + -12.2  -3.28924   GGCATCGAGGCGTAA GCGGGGCGCCCGC-GCGCGGC CTG GCCGCGCCGCCCGCGGCATGC TTATAACGACAGGTA  71 26
CXD94_RS08690 1777690 .. 1777713 + -17.4  -2.61695   TCATACCGATACCGT          GTCGCGGGCC CGCC GGCCCGCGGC           CTATTTGCCGATCCC  80 57
CXD94_RS08695 NONE
CXD94_RS08700 1779516 .. 1779538 + -11.9  -3.15544   AATACGTCTGAACCA           CGCGCGGGC CTGGC GCCCGCGCC           TTCATCGCCATGACC  66 30
CXD94_RS08710 1781885 .. 1781913 +  -2.9  -3.59738   GCCTTGGCGCGCATG        GCGTCCTTGACCG AGT CGGACAGGCGGGC        TTTGAGCGTATCGTG  50 464
CXD94_RS08720 NONE
CXD94_RS08725 1783782 .. 1783819 + -11.4  -2.67021   GTAGGTCCGGCCGCG  CCGG-CGGCGGCC--AACC TTA GGTTATGGCCGCTGTCCGG  ATTGCTATTTGGCGC  61 37
CXD94_RS08730 1785401 .. 1785411 +  -8.2  -3.06796   GCATCCAGCAGTTCG                 CGGC GCT GCCG                 TTCGATCAGCTCGGG  55 248
        mltG NONE
CXD94_RS08755 1791812 .. 1791831 +  -2.8  -3.16564   GAGCTGGTGGCGCAA            GCGGCATGA GCC TCG-GTCGC            TTCCTGCCCTGGCAG  44 17
        holB 1792874 .. 1792887 +  -9.5  -4.03078   CCTGCCAGTGACGAT               CGGGC CACG GCCCG                TTTCTCCTGTGATCC  75 30
CXD94_RS08765 NONE
CXD94_RS08770 1794645 .. 1794664 +   -15  -5.52384   CTCCACCTGATCACG            TGCCGCCC ACCG GGGCGGCA             TTTTTTTGCTCGGGG 100 94
CXD94_RS08775 1795526 .. 1795543 +  -5.6  -4.67982   GATGTATCCCTGTGG             CCGTAT CCATCC ATACGG              TTTTCTTCACTCCAA  77 39
CXD94_RS08780 1796494 .. 1796509 +  -2.5  -3.90744   CATCTACAACCTGTG              CAGCG TATACC TGCTG               TTCTTTCGCGGCACG  56 189
CXD94_RS08790 1797840 .. 1797896 +  -7.3  -3.65902   GATACGCGCCGCCTG GCCCA-CATCGT--CG-CGCTGGGGCAGG ACG CCGGCGCCGGCGACGCCGCGGTGCTGGGC TTTGCCTGCGATGCC  61 100
CXD94_RS08800 1800235 .. 1800263 + -19.6  -3.04398   CGCATCGGCGTACCA       GGCAGCCGGCCCC GCAA GGGGCCGGC-GCC        GTTTTCAGCGCAGGC 100 68
CXD94_RS08880 NONE
CXD94_RS08885 1815876 .. 1815892 +  -2.9  -3.71645   TTGTATCCTATGGCT              TGGATGG CAT CGGTCCA              TTTCAATATGACGTT  53 98
CXD94_RS08890 1816960 .. 1816984 +  -6.3  -5.24129   GGCCGTCGATTTCGG          GTGAGGGGCCA GCC TGGCCTTGCGC          TTTTTTCTCCAGCGC  93 173
CXD94_RS08905 1832431 .. 1832454 +    -3  -3.40403   GCGGCCTGCCGCCGG          CTCGGCGCAT GGGG ATTCGCAGGG           TTCTCATGCGCCGGC  48 47
CXD94_RS08910 1832982 .. 1832992 +  -3.2  -4.45261   ATGGTCGGCTTGTCA                 CGAG ATT CTTG                 TTTTCCATTTCTTTC  69 85
CXD94_RS08915 NONE
CXD94_RS08920 1836588 .. 1836619 +    -3   -3.9941   GAGCCAGATATTCGC     TGAC-CGC-CGGGC CGCCGT GCCCGCGCGCGTAA      TTTCCTTCTGCGGGG  58 23
CXD94_RS08925 NONE
CXD94_RS08930 1839469 .. 1839484 +  -4.6  -2.78384   GCGAGAACGCGGCCG              CGACGC TACA GCGTCA               TGTGCTGCGGCAGCC  43 46
CXD94_RS08975 1847698 .. 1847726 + -14.6   -3.6106   AATCCATCATGCATC       GGCGCGCG-CCCGC TGG GCGGGGCGCG-GCC       TTTCCCCCTGTTACG  81 40
CXD94_RS08980 1851423 .. 1851480 + -16.2  -2.71712   CGGGCACACCGTCAC GCGC-AAGGCGGGCTGGTCGCGCCGGT CATGC ACCTGCAGGGTCAGCCCGCCATCGCGC ATTTCGAACAAGGCG  77 63
CXD94_RS08995 1854595 .. 1854641 +  -8.6  -4.18018   CCACGCCCAGCGCGC CGCGCAC-CGCGTGGTTGCCC ACCACC GAGTAGCCGCGCGCGCGCGTG TTTTCGATCAGGCGG  75 197
CXD94_RS09005 1856377 .. 1856394 + -12.7  -4.19735   CTCGAGCGTGAAGAA             GACGCCC GCGA GGGCGTC              TTTGCTTTTGGAGCC  91 53
CXD94_RS09015 1858293 .. 1858306 +  -9.5  -2.81966   GGATGCGCGGCCGCG               CGCCG TCAC CGGCG                TGTCATGGCATTTCC  56 85
CXD94_RS09020 NONE
CXD94_RS09025 1860838 .. 1860863 + -19.1  -4.56597   TACGCCAAATGAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 29
CXD94_RS09045 NONE
CXD94_RS09050 NONE
CXD94_RS09055 1866533 .. 1866543 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS09060 NONE
        tilS 1868700 .. 1868722 +    -9  -3.28924   AAAATACTCAGCTTT           GCCCGCCCAG ACC CTATGCGGGC           TTGTCAGCCAGAGTA  61 83
CXD94_RS09070 NONE
CXD94_RS09075 1870196 .. 1870217 + -14.5  -5.45802   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 37
CXD94_RS09085 NONE
CXD94_RS09090 NONE
CXD94_RS09095 NONE
CXD94_RS09100 NONE
CXD94_RS09105 NONE
CXD94_RS09110 NONE
CXD94_RS09115 NONE
CXD94_RS09120 NONE
CXD94_RS09125 NONE
CXD94_RS09130 1879938 .. 1879948 +  -2.4  -2.66316   TTCATTGAGCGTGGA                 CACC GAC GGGG                 TGATGTCGTGCACCA  38 477
CXD94_RS09140 1882063 .. 1882105 +  -8.2  -3.25073   CACAGCGGCGGCTAT CCCGCGCGCCAGGCGCTCG AACAGG CG-GCGCCCGGCCGGCCGG TGTTCCTGTTGCGCC  58 408
CXD94_RS09150 1884140 .. 1884162 + -10.6  -2.70932   TCGCTGTTCGGTGCG           CCATGAGCGT GCG ACCCTCATGG           TGGTTCGCCGCGGCG  60 20
CXD94_RS09155 NONE
CXD94_RS09160 1886053 .. 1886069 +  -5.1  -4.12198   TCCCTTACAGGCGGG              CAGGC CGGCGGC GCCTG              TTTTACAACCTTGTA  64 45
CXD94_RS09165 1886249 .. 1886276 + -18.6  -5.04385   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC 100 83
CXD94_RS09210 NONE
CXD94_RS09215 1894909 .. 1894929 +  -4.5  -3.19157   TTGCCGCTGCATGGG            CGGCCCGCT CCA GGCGGCCAG            TTCGTCCGCTTCGTC  47 99
CXD94_RS09240 1901245 .. 1901258 +  -9.5  -3.53091   CCTGTATCGCCGCAC               CCGCC GCCG GGCGG                TTTGAAAAGCCGGCT  64 7
CXD94_RS09245 1901401 .. 1901425 + -17.2  -4.98531   GCGCCAATATGAAAA          GCCGCCATGC CTTGT GCATGGCGGC          TTTTTGCTTTGGGCG 100 35
CXD94_RS09250 1902111 .. 1902130 +    -5  -4.20696   AAAATACTAGGCGAA            TTAAAGCG TCAA CGCTCTAA             TTTTCGGCTTGGTCG  66 43
CXD94_RS09255 NONE
CXD94_RS09260 1904752 .. 1904777 +  -3.3  -3.61517   TGCGGCTACCGCCGC        TGGC-G-CGCC TGAACC GGCGACGGCCA         TTATTCGCGCGAAAT  49 82
CXD94_RS09265 NONE
CXD94_RS09270 1907911 .. 1907925 +  -3.4  -3.96051   GCGCGGCATCATCAA               CGAGGC TAC GCCATG               TTTCATCTGTTCTGT  58 131
CXD94_RS09275 1908957 .. 1908985 + -15.2  -3.53012   GGGCGCAACCATCCC        GCTTGCCCGGCC CCGGC GGCCGGGCGCGC        TTTCCGGAGCAGGCG  81 41
CXD94_RS09280 NONE
CXD94_RS09285 1911057 .. 1911105 + -18.2  -2.90075   GGTGCTGGCCGAGGT CGTGC-CCTAGGGTGCCTGTCCC TGCG GGGACAGGCACCCTTGCCGCAGG TGTCGTTCCCCGGGC  86 16
CXD94_RS09315 1919785 .. 1919813 + -10.1  -3.06915   CAGAACGTTCAGGCC        GCGGGCGCGCCGC ATG GCGGCGTGGTGGC        TTCGGTCGCCTACCT  60 125
CXD94_RS09320 NONE
CXD94_RS09325 1921282 .. 1921301 +  -4.2    -3.889   ATACGGGCATCCCGG            GGTATGGCG GCT CGCCG-GCC            TTTGCTATCCTTGCG  57 62
CXD94_RS09330 NONE
CXD94_RS09335 NONE
CXD94_RS09340 NONE
CXD94_RS09345 1927693 .. 1927747 + -15.7  -2.71364   GGGGCGGAGAACGAG TAGGCGG-GGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCGTGCCAACCGTCAA TCGTTGACGAAGTCC  75 23
CXD94_RS09355 1929346 .. 1929357 +  -7.2  -4.59773   TCTATATCCAGCATG                GCGG CGCT CCGC                 TTTTTCGGGCTCAAG  79 84
CXD94_RS09375 NONE
CXD94_RS09380 NONE
CXD94_RS09385 NONE
CXD94_RS09390 1935426 .. 1935442 +    -3  -2.78679   CGGGCGAGGGGGCCT              GAGATG CGCGC CATTTC              CTTTCCGTCCCGGCG  40 24
CXD94_RS09395 NONE
        cpaB 1936823 .. 1936837 +  -3.5  -3.01791   GTGCGCGGCGGCGAC               GTGCA GGCAG TGCGC               TATTGACGAACAGCT  44 5
CXD94_RS09405 NONE
CXD94_RS09410 1939627 .. 1939650 + -12.4  -3.16564   CCGCCATCCATGGAA          TTCGGCGCCG CGGG CGGCGGCGAA           TTCATCGCGTCCGAA  69 58
CXD94_RS09420 NONE
CXD94_RS09425 NONE
CXD94_RS09430 NONE
CXD94_RS09440 NONE
CXD94_RS09445 1947774 .. 1947810 +  -4.4  -3.04398   CCGAAACGGCCGATG   GCGTGG-CCGATCCG TAACCGGC CGGGTTGGGCCACGG    GTTTTACGAAACCGC  45 9
CXD94_RS09450 1948614 .. 1948629 +  -3.2  -3.83318   GTATGGCGGGGCGGG              GCATAG GCGG CTACGC               TTGTATTATTGCCGG  56 74
CXD94_RS09455 NONE
CXD94_RS09460 1949974 .. 1950000 + -11.5  -3.65351   GGTCCGGCGCCGGTT        CGCCGGCGCCGC GGCC GCGG-GCCGGCA         TTTCCGTCCAGCTCG  75 105
CXD94_RS09465 1950586 .. 1950598 +  -2.6  -3.29471   GCTGGGCGAGCCCCC                GGTC CCTTC GGCC                TTCGTATCATGAACG  44 1
CXD94_RS09470 1951087 .. 1951106 + -16.4  -3.75629   CCGGGGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG  88 95
CXD94_RS09490 1955399 .. 1955411 +  -7.7  -2.71144   GCCCTCCAGGCCCGT                GACGT CGA ACGTC                TCGTTGCCCACGATG  49 311
CXD94_RS09505 1961356 .. 1961381 +  -4.7  -3.06696   GCAATGCTCGCCTGG         CGCAGGAC-TGG GGT TCACGTCCTGCA         TGTCTTGAAACGCAA  45 133
CXD94_RS09510 1962391 .. 1962425 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 271
CXD94_RS09540 NONE
CXD94_RS09545 1968556 .. 1968575 +  -9.2  -2.72344   GCGCGCATGAACAGC            GGCCTGGC CTGC GCCACGCC             TGCTTCGAAATCGGC  52 243
CXD94_RS09555 1969052 .. 1969070 +  -4.4  -3.66018   GGGTGAACAGGCCAG             CCAGCCGG TGC CCGACTGA             TTCTTCCCATCCTCC  55 7
CXD94_RS09560 NONE
CXD94_RS09565 1971129 .. 1971175 +  -7.2  -3.55444   ACAAAGGGGAGCCAG GCGGCGG-TC-CGCCTGCCGGT CGGAA ATCGGCGAGCGTGTTCCGTCGC TTTACGGAATCGGAG  58 339
CXD94_RS09570 1971887 .. 1971921 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 262
CXD94_RS09590 1975752 .. 1975785 + -15.9  -2.70932   GCGCGCGGCCGCGGC     CGACGTGGCCGGCGC CGGC GCGTCCGCCTCGTCG      TCCTTGAAGCGGCGC  75 93
CXD94_RS09605 1978363 .. 1978419 +  -7.2  -4.64334   GCAAGGCGCGTGCGG CCCT-GTCCACGCGCGGCGGCCCC-CC GCGCAA GGCGGGGCAGCCGC-CGCCAACCAGGG TTTTGTTGCGGCGTT  79 173
CXD94_RS09610 NONE
CXD94_RS09615 NONE
CXD94_RS09620 1980966 .. 1981004 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CXD94_RS09625 1984229 .. 1984239 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf 1984414 .. 1984448 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CXD94_RS09650 1988344 .. 1988366 +  -4.7  -2.70932   TGAACGGCCGATGCT           GCAGCAGCG GGTGG CGCAGCTCC           TCGTTGGCGCGGCGC  43 296
CXD94_RS09695 1996821 .. 1996831 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 180
CXD94_RS09700 1997870 .. 1997880 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS09705 1999029 .. 1999068 +  -8.4  -3.60098   AAGCGCCGTGGCAAA  CACAGGAGTCGCCCGCGCG TTG CGCGTGCGCGGC-CATGGG  TTTACGCTAGCGCCT  62 170
CXD94_RS09710 2001326 .. 2001339 +  -5.9  -3.82824   GCAGGTCGGCCAGGA               CGGCG TCGA TGCCG                TTCTTGTCGATCGTG  63 408
CXD94_RS09735 2005553 .. 2005607 + -11.8  -3.84712   CTATTGACAGTTCAC AGCTAGGATGCCGCCGACCCCGGCGC CAT GCGCCGGGGTCGGCCGTCGCAAATCA TTTCATCTCCAATTG  79 20
CXD94_RS09740 2007131 .. 2007143 +  -4.7  -2.71712   GTCGCCGGCCCCGTA                CGCCG GAG CGGCC                CTTTCCCGGGCCGCG  43 145
CXD94_RS09745 NONE
CXD94_RS09750 2009353 .. 2009372 + -11.4  -4.11692   CGATATGATGGAAGA            CGGTCACC AGTG GGTGGCCG             TTTTCCCAATCGCTC  82 78
CXD94_RS09755 2009782 .. 2009797 +    -6  -2.83112   GGCCGCTGAGGCATG              CCGCGG CGAG CGGCGG               TATGATCGATTGCAT  48 32
CXD94_RS09760 2011097 .. 2011124 +  -2.5  -3.08679   CTGCGGCGAGGGGGG        GGCGCAGTGGC TACAAT GCCGCGATGCC         TATTCGCTACACCCC  42 87
CXD94_RS09765 2011954 .. 2011966 +  -3.3  -3.78793   GGCCGCCGCAAAGCA                GGCTA CCA TCGCC                TTATTCATAATTATG  56 89
CXD94_RS09770 2012812 .. 2012839 +    -9  -3.01712   GCCGCCGGCGAAAGC        GCCGGCCTGATC GCCC GGCTGGGCCGGC         TGTTCGAGCGAGACA  57 69
CXD94_RS09775 NONE
CXD94_RS09780 2015283 .. 2015312 +  -8.5  -2.62983   AGCGCTTCAGGACGG       TGGCGCGCAAGGCC GAC GACCTGGC-CGCCA       TCCTGTACACGTCCG  52 485
CXD94_RS09790 2017567 .. 2017590 + -13.8    -4.015   TGAGGGACGAAAGGG          GAGCGGCGCC GGCC GGCGCGGCTC           TTCTTTCATCGCTGG  84 53
CXD94_RS09795 2018215 .. 2018234 +  -5.6  -3.32343   GTGAAGTAGGGGTTG            C-GCCGTCC CGC GGCCGGCCG            TTCTAGGGATATCCC  51 32
CXD94_RS09800 2019349 .. 2019380 + -20.8  -2.71712   TCAAGTAATCGCGTA      TTCGGCCGGGCGCC GCGC GGCGCCCGGCCGGC       ATTTCCACCGAACAC 100 33
CXD94_RS09810 2021368 .. 2021411 + -10.9  -3.14344   GGTTGCGCGCGGACA GGCGCAGGCCG-G-GGCCGGG CAGG CCCAGCAGCACCGCCTGCGCC TTGATCAAGGCGATG  64 257
CXD94_RS09820 NONE
CXD94_RS09825 NONE
CXD94_RS09830 2024576 .. 2024592 +  -2.1  -4.62069   GCGCGCTTTTACCTC              CGTGAGG AAT CCATGCG              TTTTTCGCCTCAGCG  70 266
CXD94_RS09835 2025921 .. 2025952 +   -15  -4.26076   GCCAGCAGTCCTAAG      CGGCGCGCGGCGCC CGAC GGCGCCGCGTTCCC       TTTTCGTGAGCATCG  95 27
CXD94_RS09840 2029418 .. 2029449 +  -6.5  -3.61398   TGGCGCCGCAGGGCG      C-CACGCCGGCCGA CGAGA TCGGCTGGTGCGAG      TTCTTCCGCGACGCG  56 227
CXD94_RS09850 2031455 .. 2031473 + -11.6  -2.56271   GCGGCCACGCCTGAA             GCAGGGCG GGG CGCCCGGC             GTATTATCATCACGA  61 27
CXD94_RS09855 NONE
CXD94_RS09860 NONE
        uvrC NONE
        pgsA 2035585 .. 2035595 +  -8.2  -3.85698   GTGGCGGGCTGGTTC                 GCGG CCG CCGC                 TTTCTGGAGACCGCG  68 111
        aceA 2039446 .. 2039467 + -11.5  -6.06723   GTTGCAGGGTGGATT           TGGGGCGTC CTCG GACGCCCCC            TTTTTTTTTGCCGCC 100 85
CXD94_RS09890 2040850 .. 2040866 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CXD94_RS09915 NONE
CXD94_RS09920 NONE
CXD94_RS09925 NONE
CXD94_RS09930 2047962 .. 2047975 +  -2.4  -4.25658   CACGACGGGAACGCC               TCGT ATGACA ACGA                TTATTTTCATCGCCT  62 43
CXD94_RS09935 NONE
CXD94_RS09940 2049521 .. 2049536 +  -6.1  -3.20382   CGTCGATCGACTCCT              GCGCT TCGGCC AGCGC               TTCGTAGATCTGGAA  50 100
CXD94_RS09970 NONE
CXD94_RS09975 2059067 .. 2059077 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS09980 NONE
CXD94_RS09985 NONE
CXD94_RS09990 2061670 .. 2061688 +  -6.8  -3.28712   ATGCCTAAGCCATAA             GATGTATT ATA GATACATC             TTATAAACCGCAGGA  54 442
CXD94_RS10000 NONE
CXD94_RS10005 NONE
CXD94_RS10010 2063813 .. 2063829 +  -2.1  -3.08046   CCCAAATCTGCGAAA              ATCCGCC GTT GGCCGAA              CTTTTGCAGTGAGAA  42 60
         xth NONE
CXD94_RS10020 2066234 .. 2066245 +  -2.2  -2.90571   CCGCTACCAAAACGG                C-CGG AAT CCGTG                TATAGTTGCGGACTT  40 82
CXD94_RS10025 2066357 .. 2066384 + -12.8  -5.63517   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC 100 42
CXD94_RS10060 2072645 .. 2072672 + -18.4  -2.50443   CAGACGCCTCCCGGC        CAGGCGCGCGCA CGCC TGCGCGCGCCCG         CTTCCTGCCCTCTCC  87 406
CXD94_RS10080 2076885 .. 2076903 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 249
CXD94_RS10110 2082382 .. 2082392 +  -2.4  -2.71461   AGCAATCGGCATTGC                 CGCC ACG GGCC                 TCGGTTTCCTATTCT  38 101
CXD94_RS10115 NONE
CXD94_RS10120 NONE
CXD94_RS10125 NONE
CXD94_RS10130 2087606 .. 2087652 + -17.2  -3.56821   CAGCGGCGCAGGCCC GTCGCCGCC-GGCCGGCGCGG CGTCCC CTTCGCCGGCCTGGCGCCGGC TTTCCAGGATCTCCT  93 418
CXD94_RS10145 NONE
CXD94_RS10150 NONE
CXD94_RS10155 2091196 .. 2091230 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 213
CXD94_RS10175 2093630 .. 2093640 +  -2.4  -2.71712   CCGCTTGCCGGGATA                 CTGG GGG CCCG                 CTTTCGCCCGCGAGA  38 75
CXD94_RS10180 NONE
CXD94_RS10185 2096657 .. 2096688 +  -6.4  -3.23216   CAGACGCGATTGACG      CGCGCC-GCCTCGGG CCC CTGGTGGCCGGTGCG      TTCGTGCTCGTGCGG  50 480
CXD94_RS10195 2097855 .. 2097912 + -21.1  -2.83403   GTTTAATAGCAACAT CCTTCGTCCTTCGAACCGCCGCCCGGC CCAT GCCGGGCGGCGGCCCGGGCGATGGCGG CTTTCCTGGCGGCGC 100 102
CXD94_RS10200 2098687 .. 2098713 +   -10   -3.5393   CCAACCGCGATCTGG         TGGCCGCCCTGC TCA GTTGAGCGGCCA         TTTGCGCCGGATCAT  67 6
CXD94_RS10205 2100935 .. 2100955 +  -5.3  -3.57144   CGATGGGCCCGGGCA            GCAGCCGCT CGA AGCGGATAC            TTTGCGCGTCCAGGC  54 514
CXD94_RS10220 2102346 .. 2102397 + -11.6  -3.14931   CGCGCCCGGCTCAGT C-GGCCGGCG-CGCGCCGCACCG-CG GCGT CGACGATGCG-CTCGGCGCCGGCCAG TTGCTGCGCCATCCC  66 41
CXD94_RS10230 2103238 .. 2103269 + -24.6  -2.82759   TACGGAAGGATTCGG      CAGGAGCCTGTCCC CGTC GGGACAGGCTCCTG       TGTCATAGGTATCTT 100 121
CXD94_RS10240 2105066 .. 2105084 + -10.2  -3.01712   AGGTCGTAGCGCATC             GCCGCCAG GCG CTCGCGGC             TGTTCAGCGGCAGGA  59 358
CXD94_RS10250 2107054 .. 2107069 + -10.4  -2.78384   GCCAGCTCGGGGTCG              TCGCGC AGCC GCGCGA               TATAGTCGGCCACCC  56 498
CXD94_RS10265 2109620 .. 2109642 + -11.3  -2.70932   TGGCGCTGTAGCTCA           CCAGCAGGC ACTTG GTCTGCTGG           TAATTCGACAGCGCC  59 148
CXD94_RS10275 2113394 .. 2113428 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
CXD94_RS10320 2121364 .. 2121398 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS10330 2123262 .. 2123289 +  -5.5  -3.66058   CGCCGCGCCCGCCGC        CGC-CGTGGCGC AACCC GCGCCATGAGCA        TTCTCTATCTGCTGT  57 1
        ccoS 2123809 .. 2123832 +  -7.4  -3.28924   TCGTATTACGTGGTG          CAG-CGCACCT GTC AGGCGCGGCTG          TTCTGCGACAAGCTG  56 408
        ccoO NONE
CXD94_RS10350 NONE
        ccoP NONE
        ccoG NONE
CXD94_RS10365 2128619 .. 2128668 +  -2.6  -3.11812   TCGAGCGCGTCGCCG CGCCGGC-CGCCGACGCGCGTCGC TGAA GCGGAGC-CGACCATGCGCTGGCG TTCGCTGATGTGGAT  42 0
CXD94_RS10370 2128887 .. 2128904 +  -3.3   -3.6761   GCGGCCAGGACGAGA             CGCCGTT CTGA AGCGCCG              TGTTTGTTGCGACGC  53 15
CXD94_RS10375 NONE
CXD94_RS10380 NONE
CXD94_RS10385 NONE
CXD94_RS10390 2132500 .. 2132527 +  -6.2  -3.01712   GGCCCGGATGGTGGC        GGCCGTC-AGCTG CGC CAGCGCGACGCCC        TGTTCGGGCCCGGCG  48 476
CXD94_RS10400 NONE
CXD94_RS10405 2134279 .. 2134318 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD94_RS10410 2135685 .. 2135709 +  -4.9  -3.77087   AGAGCCGACTTGTAA          TCGGCCTCG GTGCGTA CGGGGCGGA          TTTCCATGTTCACTC  58 361
CXD94_RS10420 2136764 .. 2136781 +  -8.3  -3.67954   GGCGCGGCTGGGGTG             GCGCAGC TTGC GCAGCGC              TTTGGCCTCTATTTG  67 483
CXD94_RS10525 2161573 .. 2161591 + -17.4  -3.15544   TCTGAACGCAAGGGC             CCCCCGGC GCG GCCGGGGG             TTCCTGCCCATGGCA  84 36
CXD94_RS10540 2164560 .. 2164570 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS10545 2165553 .. 2165592 +  -9.4   -3.5361   CCTGGGCGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD94_RS10555 NONE
CXD94_RS10560 NONE
CXD94_RS10565 2168383 .. 2168405 + -11.2  -3.57144   CGACGCGCTGGCCGC           GCTGGCGCGC CGC GCGCCCTAGC           TTTCGCGCTCGCCCG  70 4
CXD94_RS10585 2171136 .. 2171155 + -16.4  -3.90112   TCGCGCCAAGACAAA            CGGCCCGC TTGC GCGGGCCG             TTTGCTTGCCGGCAG  93 53
CXD94_RS10675 NONE
CXD94_RS10680 2191988 .. 2192006 + -17.4  -3.10522   GTACGCCAAAAAAAA             CCCGGGCC AGC GGCCCGGG             TCTGTTGCGTCGCCT  84 135
CXD94_RS10735 2203845 .. 2203855 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 86
CXD94_RS10740 2205213 .. 2205228 +    -6  -2.50699   CAGGTCGAAATGCTC              GGCGGC AAAC GCCACC               ATATCTTCCTTGAGC  44 379
CXD94_RS10800 2215736 .. 2215764 + -19.7  -4.15508   GGCACGGCCGGCATC        GAGAAGCGGAGCC CAT GGCTCCGCTTTTC        TTTTGCGGCTTGCTT 100 45
        lexA 2216545 .. 2216559 + -12.8  -4.74103   CTACGCGGGCTTGCT               GCCCCC CGA GGGGGC               TTTTTGCCTTGGGGC 100 75
CXD94_RS10890 2231254 .. 2231278 + -22.9  -4.11692   GATAGCCGAAAAAAA          CCGGGCCCGGA TGA TCCGGGCCCGG          TTTTGCGGGTCGCTG 100 91
CXD94_RS10915 2238106 .. 2238131 + -14.7  -5.14563   GGCGCGCAACAAAAA         GCCCCACTGCC GCGA GGCAATGGGGC          TTTTTTCATGCGGCC 100 45
CXD94_RS10950 2242635 .. 2242671 +   -21  -4.59773   TTCGCGTGCGCAGTC    GAACTGCCGCCATCCC CACAA GGGATGACGGCAGTTC    TTTTTACGGATGGGG 100 70
        dapD NONE
CXD94_RS10970 NONE
CXD94_RS10975 2247020 .. 2247030 +  -4.6  -2.64912   GCGAACAATTGAACA                 CGTG ATA CGCG                 CTTCTGGCTTGACCC  42 21
CXD94_RS10980 2248995 .. 2249005 +  -2.4  -3.58365   GCGCAGCGTAAAACC                 AGCG AGA CGCA                 TTATCTCCTATACTC  48 74
CXD94_RS10985 2252381 .. 2252395 +  -7.1  -3.53012   TGCGGCTTTGCGCCA               GGCTG AGATA CAGCC               TTTCCCGGGCCCGGG  58 488
CXD94_RS11000 2256278 .. 2256312 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS11015 NONE
CXD94_RS11020 NONE
CXD94_RS11025 2263616 .. 2263631 +    -6  -4.08945   CACCACTTTGACAGG              CGGCGC CGCC GCGCCC               TTTTCCCGCCATGCT  66 104
       coaBC 2265016 .. 2265068 +  -9.2  -3.53174   CCTCGATCAGCGAAT GCGACAGCGACAGCCAGGCCAGCGC CAGAAA GCGC-GGCCGGGCT-TC-CAGTTGC TGTTTCTCCGCCTCT  61 191
CXD94_RS11040 2266591 .. 2266625 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS11070 2271544 .. 2271560 +  -2.1  -3.61398   AGCAAGGTATGGCCG              GCCAGCC GGC GGATGTC              TTCTTCACCGCGCAA  50 223
        cphA 2277051 .. 2277071 + -15.4  -3.61398   TTCGCCCCTCTTGCC            GCGCCGCC CGAAC GGCGGCGC            TTCTTCGACGACAGG  83 50
        cphA 2279729 .. 2279746 + -14.1  -5.28176   CTCAAATGTAACTTG             GGCCGGC GCAA GCCGGCC              TTTTTTCTCCCTGCG 100 84
CXD94_RS11095 NONE
CXD94_RS11100 NONE
CXD94_RS11105 2280773 .. 2280794 + -15.9  -5.86965   CGCCGTACGTGTACC           GCCTTCGGG TTCG CCCGAAGGC            TTTTTTTTGGTGCCT 100 73
CXD94_RS11135 2284307 .. 2284325 +  -5.9  -3.16564   GCTGGCTCAGCCTGC             GGCCGAC TGAGC GTCGCCC             TTGATGGCCTCGGCG  51 16
CXD94_RS11145 2287230 .. 2287256 +  -5.1   -2.8352   CGAGCTGGCCACCAT        CCGGC-CCGCCGT CTG ACG-CGGAGCCGC        CTTGTTCAGTTACCG  46 10
        rlmJ 2288503 .. 2288545 +  -8.8  -3.28924   CACCACGCCCAGCGC CGCCCGGCGCAGGCCCGGCG CGA CGTCCGGATAGCGCGCGGCG TTCTCGCCGGCGATG  59 407
        cueR 2291362 .. 2291384 +  -8.3  -3.29144   CGGCCGCCTCGGCAA           GGCGCTCGG CCTCC TCGCGCGCC           TTCTGCCGCGCCTGG  58 72
        plsY 2298713 .. 2298741 +  -2.9  -3.86015   CCACCGCGCGCCGAT        GACCGCGAGTTGG TGC CCAAAGCGAGGAC        TTTGTGGGACAGATA  56 162
CXD94_RS11215 2300237 .. 2300264 +  -9.8  -2.52464   GGCGCGGATGGCCTT        GGCCGCCAGC ACCTCGAC GATGGCGGCC         TGCGTTGCCGCCGCC  55 402
CXD94_RS11225 2302449 .. 2302479 + -18.3  -3.58343   CGCGCGCCTCGCCCC       GCAAGCAGGCCGC CTCGC GCGGCCTGCCTGC       TTTCGAGGTCGTCAA  90 49
CXD94_RS11235 2304289 .. 2304304 +  -4.6  -3.64703   AATTCCAGTTGCGCG              CCGTCG GCGT CGAAGG               TTTCGCTGCGCACGC  54 146
CXD94_RS11260 NONE
CXD94_RS11265 NONE
CXD94_RS11270 NONE
CXD94_RS11275 2313422 .. 2313432 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS11280 2314613 .. 2314627 +  -8.5  -3.35813   TGCCTGGAATAAGGG               GCCGC TCGGC GCGGC               TTCGTTAACCTCGAC  59 202
CXD94_RS11305 2320041 .. 2320054 +  -8.1  -3.06261   CGACCTGCGCCGCCA               GCTCG GCTT CGAGC                TGTTCCGCGTTCGCG  52 279
CXD94_RS11315 NONE
         alr NONE
CXD94_RS11330 NONE
CXD94_RS11335 2327814 .. 2327829 +    -6  -3.53811   CGCAGCATGCGGTCC              GCGGCG GTCT CGCCGG               TTTCCACCACGTAAC  56 158
CXD94_RS11350 2329955 .. 2329988 +  -2.3  -3.60792   GTAGTCCCCATACGT     CGCGTCGTAAGTTTT ACGG AAGACGTTCAGCGCG      TTGTATCTGAATGCT  48 37
CXD94_RS11355 2331143 .. 2331153 +  -2.4  -4.07568   CACCACCGCCAGCGT                 GCTG ATG CTGC                 TTTTCCGAACCCGGG  58 448
CXD94_RS11465 NONE
        sycN NONE
CXD94_RS11475 NONE
CXD94_RS11480 NONE
CXD94_RS11485 NONE
CXD94_RS11490 NONE
CXD94_RS11495 NONE
CXD94_RS11500 2352755 .. 2352776 + -12.9  -3.01712   TCGCCGCCGACCTAG           ACGCCGCGC GTCA GCGCGGCGA            TATTCGGGGCCGAGG  70 65
CXD94_RS11510 2354986 .. 2354998 +  -4.1  -3.55444   AGGCGGTCGCCCGAG                TCGAG GTC TTCGA                TTTCCACGGTCGCGC  51 511
CXD94_RS11520 2358037 .. 2358077 +  -3.2  -3.28712   CGTAGCGGTCCAGGT CCT-GTCCG-GTCATGGCGG CGA CCGCCTTCACGTGGCCCAGG TTCTCGGCCACCAGG  47 523
CXD94_RS11530 2359324 .. 2359348 + -11.4  -3.14344   TGGCGCAGCGGCTGG         CGGCGCG-CTG AAGC CGGCCGCGCCG          TTGATGGCGCGCATC  66 15
CXD94_RS11535 2360923 .. 2360957 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS11575 NONE
CXD94_RS11580 2370092 .. 2370108 + -15.1  -3.05384   GGCTGCGCCGAGACG              GCCGGCG TGG CGCCGGC              TTCGGTCGGCAGGCC  74 475
        htpX 2372476 .. 2372495 + -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 52
CXD94_RS11610 NONE
CXD94_RS11615 NONE
CXD94_RS11625 NONE
CXD94_RS11630 2380715 .. 2380770 +  -5.5  -2.82623   GGTTGGACGCCACCA CCACATCGAACCAGTCCGGGTGCTGCAC GAA GTGC-GCGCACAGGATG-T-CGATGTGG TACTTGTCCCAGCGC  44 400
CXD94_RS11645 NONE
CXD94_RS11650 NONE
CXD94_RS11655 NONE
CXD94_RS11660 2388837 .. 2388871 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        gabT NONE
CXD94_RS11675 NONE
CXD94_RS11680 NONE
CXD94_RS11685 NONE
CXD94_RS11690 NONE
CXD94_RS11695 2396179 .. 2396235 +  -3.7  -3.53012   GGCGCGTCACCATGC CGGTGAC-CGGCTCGCCGCGCAGGA AGGCGCGGA TCTTG-GCCGCCAGCTGCGCCACCG TTTCGCGGCGCAGGC  49 65
CXD94_RS11705 2399062 .. 2399078 +  -2.1  -3.17051   TATCATGCCTATCAG              GCCCGAT TGC ACCGCGC              TGTTGCTGGTGCCGG  43 498
CXD94_RS11720 2402452 .. 2402470 + -17.4  -3.55622   AGCGCAATAACCGTC             CGGGCGGC CAT GCCGCCCG             TTTCCCGGCCTTGCC  89 31
        purD NONE
CXD94_RS11730 NONE
        nadD 2405400 .. 2405412 + -10.5  -3.93489   TCCGCCACATCGACA                CCCGC GCC GCGGG                TTATATTTATCGTTA  77 60
        rsfS NONE
        rlmH NONE
CXD94_RS11750 2407377 .. 2407407 +  -7.5  -2.73364   GATACGGCGCCCGCC      GCGCAGCAACGCGC CCAG GC-CGTGGCTGCGG       TGCTTGGCATCGACC  49 472
CXD94_RS11785 NONE
CXD94_RS11790 NONE
CXD94_RS11795 2418644 .. 2418663 +  -7.8  -3.67597   ATCTAGCGCATCGGG            CCCGGCATG CAG CG-GCCGGG            TTCTTCAATAGCGCC  63 35
CXD94_RS11810 2421968 .. 2421988 + -15.4  -2.57132   CAGGCGCTGGCGCTG            GCCGCCCG ACAGG CGGGCGGC            ATTCTGGCCCACCGG  69 298
CXD94_RS11820 NONE
CXD94_RS11825 NONE
CXD94_RS11830 2425633 .. 2425671 + -19.7  -3.01712   AGCTGACATCCGCGG  C-GAGGTGTGCCTGTCCC CACT GGGACAGGCACACCGCAG   TGTTGACGGGCGCCG 100 84
CXD94_RS11845 2429970 .. 2430009 +    -2  -3.44527   CTCGCGTAGCGGCGC GGGCAGGCT-GCCCGCGG CAGCCA CCA-GGTCGAGCCAGCCC  TTGTCGTAATCGGTG  47 463
        lpxO 2437849 .. 2437884 + -20.4  -2.53015   TGGCACTCTAACCAC    CCGGGTGCCTGTCCCC GCGG GGGGACTGGCACCCGC     TGACTTGGCGCCTGT  95 30
CXD94_RS11885 2443389 .. 2443443 + -13.5  -3.04322   TGGTTTTCATCAAGA AGCTGTAACCAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTAAA-ATGGCC TGTTCGCAACTTACC  70 18
CXD94_RS11890 2443770 .. 2443785 + -11.8  -4.90266   TTCGCCTCATCGCAA              CCGGCC GGCA GGCCGG               TTTTTCATTGATGCC 100 53
CXD94_RS11895 2445773 .. 2445795 + -12.6  -3.61715   TCTCGATGGCTTCTT           CGCCGCGCGC CAG GCGCTCGGTG           TTCTTGACCCCGGTG  74 122
CXD94_RS11920 2451751 .. 2451805 +  -7.2  -3.39327   ATTGAGCGAATCGCC GCCGCGCGCGTAGTACATGTAGAC CACGCCCCC GTC--CATGAACAACGCGCGCCGC TTGTGGGTGTAGCCG  55 480
CXD94_RS11970 NONE
CXD94_RS11975 2461859 .. 2461869 +  -3.2  -2.63631   TCCCTTCGAGCAACC                 TGGG CTA TCCA                 TCATGTCGCAGTTGA  39 53
CXD94_RS11980 2463184 .. 2463194 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS11985 2464218 .. 2464253 + -14.7  -2.70932   TCTAGTGCATCTCAG   CGCGGCGG-GCAGGCGG CCCG CCGCG-GCGCCGCCGCG    TCGTTCCCGCCCACC  72 45
CXD94_RS12030 2472539 .. 2472560 + -14.4  -4.07885   CCGGCATTGCCGCCA           CGGGCCCG CGCAGA CGGGCCCG            TTTTGCAGGACCGTC  85 42
CXD94_RS12040 NONE
        acnD NONE
        prpF NONE
CXD94_RS12055 NONE
CXD94_RS12060 2480869 .. 2480882 +  -3.9  -3.53012   TCACGCTGGTTGTCG               TCAAA CCCT TTTGA                TTTCCGCGCCAGCGA  51 12
CXD94_RS12065 2482317 .. 2482328 +  -7.2  -3.28712   AAGCGCCGGCCCGCG                CGCC ACGC GGCG                 TTGTAAAAGCGCCGC  54 39
CXD94_RS12070 2482770 .. 2482788 +  -7.4  -5.75342   AAGCCCCTTTTAAGA             CCCGCT CTAAACC AGCGGG             TTTTTTTTGGCCGGG 100 96
CXD94_RS12080 2484313 .. 2484333 +  -8.3  -3.09492   AATAACCCTTATACG            TCCCCGT TAGGGAT ACGGGGA            TGTTGCAGTTCACGG  56 39
CXD94_RS12085 NONE
CXD94_RS12090 NONE
        hslO NONE
CXD94_RS12100 2488851 .. 2488867 +  -7.9  -2.84325   ACAGGCCGGACTTGT              CCACGCC GAA GGCCTGG              TCGTATTTGCCGGGC  52 449
CXD94_RS12120 2492341 .. 2492374 + -27.5  -3.16742   CGGAAGACAGCGGTT     TCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGA      TTACTGACCATTAAC 100 487
CXD94_RS12215 2512769 .. 2512815 + -16.5  -5.00884   CGGCATGTAAGCGCG GGCGCGCACGTGGGCGCC-GGCA GGA TACCAGGCGCCCTCGCG-GCGCC TTTTTTCCAGACCGT 100 31
CXD94_RS12220 NONE
CXD94_RS12225 NONE
CXD94_RS12230 2515497 .. 2515515 +  -8.8  -3.45849   GATGCCGTCCAGGCC             CGCGGC CAGCCGC GCCGCG             TTGTCGTGGTCTAGC  61 273
CXD94_RS12265 2524089 .. 2524106 + -14.1  -4.41494   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 61
CXD94_RS12275 2525758 .. 2525787 +  -8.5  -3.05596   GACAGTTCACAACTA       GCCGTTCA-GGCCG GCC CGGCCCTGCACCGC       TTCGCTGACCACCTG  55 25
CXD94_RS12295 NONE
CXD94_RS12305 NONE
CXD94_RS12310 2533785 .. 2533812 + -18.4  -2.71924   CATGACCTGAGCCGC        GCGGGCGAGGCC TGAC GGACTCGCCCGC         CTTTCCGGGAGGCTG  87 11
CXD94_RS12315 2534148 .. 2534167 +  -2.7  -3.63266   ATGCGCAACGTACGG            CCCGGCT GAACAG GGCCCGG             TTTCCGATGGATTTT  53 17
CXD94_RS12320 2534990 .. 2535008 + -14.6  -5.78622   CTGCGCAGCGAAAAA             GGCTTGCC AAC GGCAAGCC             TTTTTTTTCGCCTCC 100 50
CXD94_RS12325 2536099 .. 2536121 +  -5.5  -3.83026   AGGCGGCCAACCCAT          GACCCGCACC AGCC GG-GCGGATC           TTTCATGTGCCGCGG  60 24
CXD94_RS12330 2537212 .. 2537222 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 171
CXD94_RS12340 2539422 .. 2539469 +  -7.4  -3.64822   GGTTGGCGATGCCCA CGCCGTGGCCGGCCAGCGCCAG TTGG CAGACGGTGGACGAATACGGCG TTTCGATGGCGGCGT  60 228
         maf NONE
CXD94_RS12445 NONE
CXD94_RS12450 2558391 .. 2558436 + -13.1  -2.71712   TGACGGAGAAGCACC AGGCCG-CGCGCGACATGGTGC TGC GCGCCCTGCCGCGCGGCGGCGG CTTTCGCGAAGACGA  67 217
CXD94_RS12485 2565555 .. 2565574 + -13.6   -5.5112   CGCCAGACATTGCAA            GCCCCTGA TCCG TCAGGGGC             TTTTTTCTTGGTCCC 100 36
CXD94_RS12490 NONE
CXD94_RS12495 NONE
CXD94_RS12500 NONE
CXD94_RS12505 NONE
CXD94_RS12510 NONE
CXD94_RS12515 2572936 .. 2572954 + -13.8  -2.61264   TCATCATGGAAGGCC             GCTGCCCG CTC CGGGCGGC             CTTGTCCATGGAGCC  69 111
CXD94_RS12520 2574191 .. 2574208 +  -7.7  -4.18197   GCCAAGGTCCAGGCA             CGCTGAA CATC TTCGGCG              TTTTCCATACGCACT  74 20
CXD94_RS12525 2576593 .. 2576618 +  -4.7  -5.29846   AAATACCCAGGAAAC         CCCTGTAGA ACCGAGCG TCTGCGGGG          TTTTTCTTTCGGGTT  93 107
CXD94_RS12530 2577525 .. 2577536 +  -3.6  -3.12668   CAGGCGCCGACGCCG                GCGT AAAT GCGC                 TTGGGTCTCCAGATG  45 85
CXD94_RS12540 2578778 .. 2578815 +  -9.8  -3.05384   CTGGCGCATAACGGC   CCGCGGGCCGGTCAGCC TTCCT GGCTGA-TGACCGGCGG   TTCGATCCAGAAAAA  60 30
CXD94_RS12550 2579687 .. 2579724 + -10.5  -2.59742   AAATTTGCCGCAACG   CAGCAAACGCCGGC-GTC CCG GACTGCGGGCGGTTGCGG   ATTGTCGCCATTGCG  57 153
CXD94_RS12555 2580177 .. 2580196 + -10.6  -5.40072   GCAAATCAATGAAAA            AGCCGCCC GGAT GGGCGGCC             TTTTTTTGCGGCACG 100 53
        trxB NONE
CXD94_RS12590 NONE
CXD94_RS12595 2588755 .. 2588765 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 77
CXD94_RS12600 2589748 .. 2589787 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD94_RS12605 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 2598511 .. 2598531 +  -6.7   -2.8655   CCTGGCGCTGGACCG            CCTGCGCTG AAG CGGCGCGCG            TATAGTATGCGTGCC  50 16
        kdpE 2602215 .. 2602249 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 203
CXD94_RS12670 2607710 .. 2607738 +  -5.8  -3.33261   TCTTGCGCACGTTGG        CCGTGGCCGCGC TGCCC GCGGCGCCACGC        TTGTAGGCCTTGAGC  52 186
CXD94_RS12685 2609498 .. 2609511 +  -9.5  -2.75183   TCCTTATCATGCCTC               GGCGC TGTC GCGCC                TCATTGACTGCCACT  55 87
CXD94_RS12690 NONE
CXD94_RS12695 2611733 .. 2611758 +  -7.5  -3.16881   GCACGAACCCCAGCT         TGCGGTGCAGCG CGA CGCTGC-CGGCG         TTGGTGGCGTCGATC  53 148
CXD94_RS12710 2615723 .. 2615752 + -22.3  -2.62616   GACATCCGCGACAGA       GTGTGCCTGTCCC CGCT GGGACAGGCACAC        TGCTCTACGCCATGA 100 97
CXD94_RS12750 NONE
        recN 2625747 .. 2625787 +  -2.3  -4.75776   ATTTACGAAAAATGT  CAAGGATCTTCAGGCGGGG AAA CGTCGCCTTCAGGCCCATG  TTTTTCAGTTCGCTT  76 453
        bamE NONE
CXD94_RS12770 2627560 .. 2627572 +  -4.7  -3.29144   TTGATCGATCAGCCA                GCCGG CGG CCAGC                TTGTAGCGGCCATCG  49 263
CXD94_RS12780 2628684 .. 2628705 + -14.5  -5.63236   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTTTTGCAT 100 37
CXD94_RS12825 2639276 .. 2639291 +  -3.2  -3.40403   CGCGACGCTATTCTC              GACTTC CCAC GAAGCC               TTGTCCTGCGAAGGG  48 53
CXD94_RS12830 NONE
CXD94_RS12835 2641785 .. 2641800 +    -4  -3.90588   CGCGCAGCGATACCC              CTTC-GG ATT CCAGAAG              TTTCATTACCCCATA  58 426
CXD94_RS12960 2666909 .. 2666941 +  -8.9  -4.07568   CCCGCCAGGAAGCGG      GCCTGCCGCGCGTAC GCG GCGCGGTCGGCGGGC      TTTTCGCCAAAGCGC  72 179
CXD94_RS12975 2669499 .. 2669549 +  -7.2   -4.0162   CCGAGTTTCGCGCCG CCGCAGCGCTCGCTGCTGGGCGAG ATC CTCGACTGGATGCTGGCGCCGCTG TTTCTCCTGTGGCCC  66 105
CXD94_RS12980 2670929 .. 2670944 +    -4  -3.71917   CCGGGCTGGTACGCG              CGATAG TTAC CTATTG               TTTCAAATTTAAGAT  54 61
CXD94_RS12985 2672777 .. 2672805 + -10.9  -4.60041   TGATAACCATCCCCC        GCCGGGTTGGACC GCT GCGCCAATCCGGC        TTTTTCAAGCTCCCT 100 38
CXD94_RS13030 2681593 .. 2681606 +  -9.5  -2.70932   CGAAGCCCTCTCCTA               GGCCC GCGC GGGCC                TGATTGCACAAGAAG  55 25
CXD94_RS13035 2683135 .. 2683157 + -19.2  -5.53288   TGCGTGCCCCGTACG           GGCCCGACAC GAT GTGTCGGGCC           TTTTTTTGCCTTGCG 100 243
        rdgC 2684847 .. 2684872 +  -6.7  -4.68724   GTAAATGACGTCCGC         GCCCGCCAGGCC CTC GGCCAG-CGTGC         TTTTCTGTTCGATCA  82 434
CXD94_RS13070 2687895 .. 2687942 + -21.2  -4.15788   CGATCCAGCGCCAGT GCGGCTGAGCATGCCGGCGGGC GCCT GCCGGCCGCCTTGCTCAGCCCC TTTCTTGAGCACGTT 100 18
CXD94_RS13090 2690410 .. 2690468 +  -2.2  -4.33153   CTGTCCACGCGCGCA C-GG-GCCGAGGAAGCGTGCCGGACTGCC CACG GGCAGCCCGGCGCGGA-CTACAGCTCCAG TTTGTTGATCTTGGC  65 78
CXD94_RS13100 2692424 .. 2692434 +  -6.8  -3.03159   AGCCCAATCAATGAC                 CGCT CGC AGCG                 TCTTGGGCGCGTTCG  51 121
CXD94_RS13145 2699839 .. 2699873 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS13155 2702223 .. 2702235 +  -3.4   -4.2349   CTGGACAAGTCCTTG                TTCC AGCGA GGAA                TTTTCGATCTGCGCG  63 69
CXD94_RS13165 2703626 .. 2703660 +  -2.1     -3.94   ATTGACAGTTCACAC    CTAG-CGTCC-ATGCCA GCT TGGCGTAGGACGTCCCG    TTGTTTACGGCTTGC  56 22
CXD94_RS13190 2707179 .. 2707213 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS13260 NONE
CXD94_RS13285 2725847 .. 2725891 +    -7  -3.67792   ACTGCTGGGCGCGCG CCACGCGCTCGGCATTCAGCC ACTT GG-TGACGGTCGTGCCCGTGG TTTCCCTGAATCTAC  64 358
CXD94_RS13295 2727897 .. 2727944 +  -8.4  -2.55544   AGGTCATCAGCAGCG CCATCGGCGTCACC-GTGACCTG GCC CAGCGCATAGTTGAAGCCGATGG TCACTTCCGTGATGA  51 224
        sulP 2733626 .. 2733641 +  -3.9  -3.54424   GCTGGCGAGCGGCCC              CGGCC CGGTCA GGCTG               TTTCCGGCGCTCACC  51 379
CXD94_RS13385 2746183 .. 2746196 +  -4.5  -3.54459   CGGTGGCAGGCCGTC               GCCAGG ATT CC-GGC               TTTGCGACGACTTGG  52 57
CXD94_RS13415 2752205 .. 2752226 +  -2.9  -2.65264   AGGCGGTAGGTGGCG           GCGAGCCAGT ACG AC-GGCATGC           TGCTGTGCGTGGTCG  39 47
CXD94_RS13460 2763052 .. 2763069 +  -4.1  -4.31943   TCCCGCCGCCCGCCA             TGAACCG GGGA CGCTTCA              TCTTTTTTCTGTACC  68 42
CXD94_RS13465 2763848 .. 2763871 + -16.7   -3.0806   CCGGGCCCGCGCGCC          GGCGGCGCG GATCGG CGCGCCGCC           TCTTGCGGATTTCGC  81 48
CXD94_RS13470 2765158 .. 2765168 +  -2.4   -4.4078   CATACGCGATGGTCT                 GGCC CTG GGGC                 TTTTCGTTGGCCAGC  68 83
CXD94_RS13500 2772036 .. 2772059 +  -2.2  -4.07568   CGGCAGGCGCCGCCG          CGGCCTGAGC GCCT GCCCAGCCCC           TTTTCCCGCCCCGAA  58 18
CXD94_RS13505 NONE
CXD94_RS13510 2774752 .. 2774777 + -13.3  -2.57132   CCTGGCGATCCTGCA         CGATGTGCCGC GTCA GCGGCGTATCG          ATTATCCCGGGCGCC  66 269
CXD94_RS13540 NONE
CXD94_RS13545 2781142 .. 2781179 +  -2.5  -4.58395   CGGCACGAGGCCGCG   GCCG-TCAATTCGCGCGG ATC CCGCGCTCGTCGATCAGC   TTTTTCCAGCGTGCG  70 112
CXD94_RS13560 2784319 .. 2784361 +  -3.9  -3.84406   GGCCGAATTAGCGCG CG-CCCGCCAGCCTGCCTGG CCGG CCAGCCAGGGGCGCGGATCG TTGTTGTCATAGCGG  58 339
        queE 2786417 .. 2786439 +  -4.8  -3.64703   CCATGACTGTCCGTC           CCATCGCG GGAGATG CGCGATGA           TTTCCGTCACCCGCC  55 35
        queD 2787120 .. 2787144 +  -7.8  -3.31792   CTTGGCGCCCTGCCC         CA-CCAGGCGC TTGA GCGCCGGGATG          TTGTGGGCGTCGTAC  55 266
CXD94_RS13600 NONE
CXD94_RS13605 2790383 .. 2790400 + -11.3   -4.1822   GCGCTCCAAGGCGGT             GTACCGC CTGG GCGGTAC              TTTCTTCGGCTCGGC  89 192
CXD94_RS13620 2792709 .. 2792736 +  -5.5  -2.53263   TGCACGCGGCCCTGC        CCGGCGGTCGAC ACCAG GTCGG-CGCCGA        TCAATTGCGCATCGC  42 428
CXD94_RS13635 NONE
CXD94_RS13640 NONE
CXD94_RS13645 NONE
CXD94_RS13650 NONE
CXD94_RS13655 2808862 .. 2808876 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 128
CXD94_RS13665 2810648 .. 2810694 + -12.1  -3.35679   GCAACGCCGGCCATG GCGGCCGGCGTTGCGCCCTGCG AACC CGCCGCGATCAGCG-CGGCCGC TTGTCGATGACGCGC  73 45
        paaX 2821385 .. 2821410 +  -4.6  -3.62597   GCGCCTGCAGCAGCG         TGGCCGCCAC CAGCGC GTCGCCGCCA          TTGTTGCCCGGTCCG  54 497
CXD94_RS13740 NONE
        rsgA 2824390 .. 2824414 +  -4.3  -3.78419   GTCCCCACGAGGACA         GGCACCTGCCG ACTCC CGG--GGTGCC         TTGTATCTTTCCTCC  58 56
CXD94_RS13775 2830882 .. 2830934 +  -7.4  -3.36054   GGGCAAGACCACCGC GTGCGGCCTGCTGGCGCAGGCC GACCCGCAG GGCCTGCACCTGCCGTCCGACC TGTTCTATGGCTTTC  59 151
CXD94_RS13795 2834719 .. 2834746 + -11.2  -3.77119   CGCGCGCGGCGTGAT        GCGGGGCCCGGGC GGG GCCTG-GCGCCGC        TTGTATTCGTTGATG  74 501
        argH 2839222 .. 2839239 +  -9.8  -4.65895   CGCTCCATGTAAAAA             CCCGGC CTGCGC GCCGGG              TTTTTACATGCCGCG  93 49
CXD94_RS13830 2842131 .. 2842141 +  -8.2  -2.80622   CCGCGATTTCCGGCC                 GCGC GCC GCGC                 TATGATCGACTATCT  52 10
        moaA 2843601 .. 2843611 +  -4.6  -3.05384   TCCTCGCGGCTGTCC                 TGGC GTG GCCG                 TTCGGTGCGCAGCGG  46 372
CXD94_RS13865 NONE
CXD94_RS13870 2850823 .. 2850841 + -13.8  -3.05463   TCGGCCAGCACGGCC             TGGCGGCG TAG CGCCGCCG             TTCAGTCGGCGGGCT  72 15
CXD94_RS13880 2852012 .. 2852027 +  -4.6  -3.14404   CGCCGCCACCATGCT              GGCCCA GGCC TGAGCC               TTACGTAGTTGCTGT  47 13
CXD94_RS13885 2853534 .. 2853569 + -13.2  -3.00298   AGCGACTGCCGCGGC    AAAGGGAGCCTGTCCC CGCT GGGACAGGCTCCCGGG     TATGTAGTTACCACG  70 57
CXD94_RS13900 NONE
CXD94_RS13905 2857182 .. 2857200 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 297
        cadR 2861197 .. 2861207 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS13925 2862190 .. 2862229 +  -9.4   -3.5361   CCTGGACAAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD94_RS13930 2863364 .. 2863378 +  -2.7  -3.57144   CTTGCTCGGTCATGT               AGGCC GACAG GGCCA               TTTCCAGCTGCAGGG  50 129
CXD94_RS13970 2871455 .. 2871489 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS13990 2875565 .. 2875575 +  -6.8  -3.40878   CGCGCTGTCGGGCAC                 GCTC ACC GAGC                 TCTTGTTCGCCTCGT  56 335
CXD94_RS14010 2881911 .. 2881931 +  -8.1  -2.62263   GATCGTGCAGCATCT            CGCGGGCCG GGC CGGACAGCG            TGATCTCGCCCGACT  48 139
CXD94_RS14085 2906330 .. 2906350 + -15.4  -5.13343   GTCGTTATTATTTGA            GGCGGGGC TGCAT GCCCCGCC            TTTTATTTTGCATTG 100 92
CXD94_RS14090 2906932 .. 2906947 + -10.4  -4.62069   CCAGAACGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTGCCATGCCGG  93 81
CXD94_RS14120 NONE
CXD94_RS14125 NONE
CXD94_RS14130 2915331 .. 2915357 +   -15  -3.60865   ACCCTGACCCGGCCG         CGCCGGCGCCGC CCC GCGCAGCCGGCG         TTCTGCTTTAGAATC  81 34
CXD94_RS14135 NONE
CXD94_RS14140 2916423 .. 2916439 +  -2.1  -2.64099   AAACAAACCCATCAG              GAGCCCC CAT GCGTCTC              ATTCTGCTCGGACCG  38 108
CXD94_RS14145 2917093 .. 2917151 + -13.8  -3.39895   GCAGAGCTAAACCGC GCCGCG-AGGCCGCCGCGCCGCCCGCGCA GGGG TGCGCGGCCG-CGCG-CGCCCTGCCCGCC TTCATTGCTAGCCAA  77 31
CXD94_RS14150 2917948 .. 2917976 + -18.2  -2.84602   AGTAATCCCTCCCCC        CGACGTGCCGGC TCGAT GCCGGCACGTTG        CTTTGGTACCCTGGC  86 36
        murJ 2919604 .. 2919636 +   -12  -4.20516   AATAGTGAAAATCAC      AACAAAGACCGGCC CTTAC GGCCGGTCTTTGCA      TTTATTGGATCGACA  91 65
CXD94_RS14160 2920818 .. 2920841 +  -6.8  -3.58037   GGGCTTGCAATCCCC          GTCGGAC-TTG ATA CAATGTCTGAC          TTTGCCGAATTCATA  58 74
CXD94_RS14165 2921177 .. 2921194 + -11.3  -5.45802   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC 100 69
CXD94_RS14185 2923885 .. 2923895 +  -2.4   -3.7941   AGCCGATATTGCCGT                 TGGC GCC GCCC                 TTGTTCTCCACGATG  54 342
CXD94_RS14230 NONE
CXD94_RS14235 2933735 .. 2933747 +  -3.3  -3.07233   AAGCCGCCAAGAGCA                TCGGC TAA GCCTA                TATTGCCCATTGTCA  42 18
CXD94_RS14240 2935520 .. 2935539 + -13.6  -5.40072   CCACCCATGCCGGAA            GAAGGCCC TGCG GGGCCTTC             TTTTTTTGCCCGGCG 100 44
        pdxA NONE
CXD94_RS14250 2938065 .. 2938095 + -11.1  -3.06183   CCAGCTGCCCGCACT      G-GCGCGCCAGGCGC CGC GCG-CGGGCGCGCAC      TTCCATCGAGCTGAG  62 459
CXD94_RS14310 2947960 .. 2947978 +  -5.8  -3.14931   CCTTGCCCGGGCCCG             GCGCTGCC ATC GGCCACGC             TTGCTAACGCCTCGA  49 98
CXD94_RS14315 NONE
CXD94_RS14320 2950533 .. 2950567 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
CXD94_RS14345 2955897 .. 2955915 +   -11  -3.55444   ATTTCGCCCATGCGG             CGCTCGAT CAG GTCGAGCG             TTTCCAGCGTGAAGG  71 424
CXD94_RS14355 2958627 .. 2958661 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS14380 2964965 .. 2965006 + -26.8  -3.54903   GGCGCGTTCCCTTCC GACCCGATGCGTCGCCGGC CCGTT GCCGGC-ACGCATCGGGTC TTATCCATTTTATAT 100 62
CXD94_RS14385 NONE
CXD94_RS14390 2966790 .. 2966805 +  -3.3  -4.28548   GCATGTCGCACCGCT              GAATC CCGCAC GATTC               TTTTCATCACTCCGT  63 24
CXD94_RS14395 2967679 .. 2967704 + -20.5  -4.56597   CCGGGCCTGCATCCC         GCCAAGCCGCC CTCG GGCGGCTTGGC          TTTTTCACCCGGCCG 100 68
CXD94_RS14400 2967874 .. 2967919 +   -28  -5.84381   AGGCCAGCAACAAGG CCAGCAAGAAAAAAGCCGCT CATGGA AGCGGCTTTTTTCTTGCTGG TTTTTTTCTTGCTGG 100 58
CXD94_RS14405 2969111 .. 2969123 +  -3.3  -4.11216   ACCTATTGACAGTTC                ACAGC TAA GCTGG                TTTTCCGAGTCGCGC  59 18
CXD94_RS14410 2970324 .. 2970341 +  -5.5  -3.29144   CTGGCCGACGCCACG             CGACTCT ACGA AGAGGCG              TTCTGACGCCGCTGG  51 2
CXD94_RS14450 NONE
CXD94_RS14455 NONE
CXD94_RS14460 NONE
CXD94_RS14465 NONE
CXD94_RS14470 NONE
CXD94_RS14475 2980302 .. 2980341 +  -6.5  -3.17075   GATGCGCAAGGCGCA GG-CGTGCGATGGCCTGTA TTCG TAC-GGCCATGTCACGGCC  TTGCCTTACGAGCCG  51 275
CXD94_RS14485 2982349 .. 2982359 +  -5.4  -3.25823   CGTTTTCCGAGCTGG                 CTTC CAT GAAG                 TTCATATAGACAGGC  51 6
CXD94_RS14490 NONE
CXD94_RS14495 2984452 .. 2984478 + -10.9  -4.52857   GGCCGCGACGGCTGG        CGCGCCAGGACG AGGC TGTCCTGGC-CG         TTTTCTATGACACGT  95 46
        soxR NONE
CXD94_RS14510 2986131 .. 2986156 +  -5.4  -3.34398   CGTAAGGCAGTATTG         CCGGCTGTATC CCGAT GGTGC-GCCGG         TCTTTGCGCCCGCGC  51 57
CXD94_RS14515 2988518 .. 2988552 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS14530 2990982 .. 2990998 +  -4.3  -3.14132   GACAGGCAGCAATCG              CCGGGCT GTT AGCTCAG              TTGGTAGAGCAGCGG  47 140
CXD94_RS14535 2991070 .. 2991099 + -17.3   -5.0925   CACCATGATTTGTAA       GGCCGTTAGTGAT AGTA GTCACTAACGGCC        TTTTTGCTTTTCGGC 100 36
CXD94_RS14580 NONE
CXD94_RS14585 2997953 .. 2997969 +  -5.8  -3.05596   GAATACGTGATCAGC             GGCGCGG CCGG CC-CGCC              TTCGCTCAGGGCATG  48 332
        panB 2999742 .. 2999757 +  -3.2  -4.07568   TCCTGCAAACCCGCT              CCC-GCG CGC CGTAGGG              TTTTCGCCACAGGCA  59 253
CXD94_RS14600 3001367 .. 3001401 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 256
CXD94_RS14630 3007283 .. 3007302 +   -10  -3.33261   GCACGCTGGCGATGG            CGTCGGCGG CCA CCGCC-ACG            TTGTCGCGGTTCAGG  63 72
CXD94_RS14660 NONE
CXD94_RS14665 NONE
CXD94_RS14670 3016030 .. 3016050 +  -8.9  -3.46602   TTGTACCGAGTAACC            TTGCGCGGG CCG CCTGCGCCA            TTGTGATGTCCACGG  60 84
CXD94_RS14680 NONE
CXD94_RS14685 3018956 .. 3018978 +  -6.9  -3.35679   AGGCATCGACCAGCA           GGCCCTGGT AACGC GCCACGGCC           TTGTGCGTCACGCCG  52 304
CXD94_RS14695 NONE
CXD94_RS14700 3022133 .. 3022155 +  -5.4   -3.7941   ACGAGCTGACGTCGT           GCAGGTCGGC GAT GCGGATCAGC           TTCTTGTAGACCGTG  58 115
CXD94_RS14715 3025016 .. 3025046 +  -6.8  -3.39784   TGGCGCACCAGGCTG      GGGCCGAGCGTGC CGGGAT GC-TGCTCGGCCA       TGTTCTTCAGGCTCC  55 431
        gcvA 3029523 .. 3029565 + -10.5  -3.56092   GGCAGCGTGAGCGCC GCGGCGGCCTGCGCGATGGT CATG GCCACCAT-CAGGTCGCCGC TTTGCGCGATGCTCC  67 412
CXD94_RS14755 3032623 .. 3032661 +  -9.6  -3.14132   CGGATCGGCGATGCC G-CCGACCGCGCGCACCGG CATG CCGGTGCG-GCGG-CGCAC  TTGCTCGGCCAGGCC  59 213
CXD94_RS14765 NONE
CXD94_RS14810 3041873 .. 3041905 +  -3.4  -2.78463   CCACTTCGGCCGGCT     CCATCAGCCGGTC GAACGGCA GGCCG-CTGAGGG      TCTCCTGCCAGCGGT  40 172
CXD94_RS14860 NONE
CXD94_RS14865 3050431 .. 3050441 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 64
CXD94_RS14870 3051583 .. 3051603 +  -2.4  -2.59267   GCCCAGCGTCGAGAT            CAGCACGA CGTAA TCGGGCAG            CTTGGTGTCCTTGCC  38 163
CXD94_RS14885 NONE
CXD94_RS14890 3054949 .. 3054964 + -10.4  -5.86332   ACGAACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTGCCTTGC 100 58
CXD94_RS14905 3057693 .. 3057712 +   -15   -4.8622   GCGTGCAATGAAAAA            GGCGGCTC GCAT GAGCCGCC             TTTTTCATTGCCGGC 100 49
CXD94_RS14925 NONE
CXD94_RS14930 3062880 .. 3062908 + -14.6  -5.40072   GCCCGCCATGCAGCC       GCCCCGTTGGACG ACCA CG-CCAGCGGGGC        TTTTTTTCGCCGGCC 100 78
CXD94_RS14935 3064406 .. 3064434 +  -5.2  -3.36569   GCGCACCATGGGCGT       CGTCG-CCGTCGC CCTG GCGGCGGTCAATG        TATTTGGCGGCTTCC  53 231
CXD94_RS14945 3066262 .. 3066274 +  -4.7  -3.55622   TCCAGGCTCCAGGCA                TCGGC CTC GCCGC                TTTCCAGCAGTTCCC  54 334
CXD94_RS14955 3069380 .. 3069390 +  -6.8  -3.31144   CCTATTACGCCACGG                 CGAC GGT GTCG                 TTCTGACCATGGCGA  54 9
CXD94_RS14960 3070774 .. 3070790 +    -5  -3.15544   ACTCCTTCACCATGG              CGCCGC AACCC GAGGCG              TTCATGACGATGGCC  47 489
CXD94_RS14985 3089008 .. 3089045 + -16.4  -3.61398   GCGAGGCGGCCTTGA   TGGCATCGACGGCGAT CTTCAC ATTGCCGTCGGTGCCG    TTCTTGAAACCGACA  85 523
CXD94_RS15005 3092683 .. 3092704 + -18.7  -5.06414   TTCGTCCCGGAATGC           CGGCGCGCC TCAA GGCGCGCCG            TTTTTATTGCGCCAC 100 49
CXD94_RS15035 3096922 .. 3096938 +  -5.7   -3.4277   GCTGGTACATGAACC              CGTGGTC CTT GGCCTCG              TTGTAGGTCTTGCCT  55 128
        chrA 3099735 .. 3099756 +  -3.6  -4.11216   CGGATCGTCGTAGAC           GACGC-GCC ATACC GGCAGCGGC           TTTTCCACGTGGCCC  63 280
CXD94_RS15070 NONE
CXD94_RS15075 NONE
CXD94_RS15080 NONE
CXD94_RS15085 3106767 .. 3106786 +  -2.8  -3.23216   TTCAGCGTCGTCGAC            GCCAT-GCC CGA GGCTATGCC            TTGCTCGTGGTGCGC  46 280
CXD94_RS15095 3108498 .. 3108519 + -18.7  -3.28712   CGCCACAAACGACAA           CCCCCCGGG CAAG CCCGGGGGG            TTGTCGGCGAACCAA  93 70
CXD94_RS15150 3119866 .. 3119877 +  -5.8  -3.01712   GGGTACGGAAGCGGC                TGGC GATG GCCA                 TCTTGGCGCGCGGCC  48 303
CXD94_RS15160 3122174 .. 3122184 +  -4.6   -4.0371   AGGTCCACCATGGCC                 GGCG CCG TGCC                 TTTGTATGGAACATG  63 455
CXD94_RS15190 3125798 .. 3125826 +  -5.3  -3.87373   GCACATTTGGACAAT       TCATTGCGCCCG CCATGA TGGGCGC-ATGG        TTTATCCGCGCTGTC  60 141
CXD94_RS15200 3128044 .. 3128058 +  -3.5  -3.72576   GCGCGCAGGGCCGCT               TCGAC CTGAT GTCGG               TTTGCTCGGGCGCGC  54 348
CXD94_RS15230 3134001 .. 3134015 +  -3.5  -3.94746   GAATGTGCCGGAGGG              CGC-GC ACGC GCAGCG               TTTGCTTGAATCTCA  59 63
CXD94_RS15235 NONE
CXD94_RS15240 3136853 .. 3136867 +  -4.2  -3.14931   GTCGAGCACGGTGTC               GTCGTC GTT GACCAC               TTCATCGAACGTGAA  45 266
CXD94_RS15280 NONE
CXD94_RS15285 3144562 .. 3144573 +  -5.8  -3.78022   CTTCAGTAGCGGTCC                CAGG CCTT CCTG                 TTTCATCCCTCTACC  60 183
CXD94_RS15295 NONE
CXD94_RS15300 NONE
CXD94_RS15305 3148158 .. 3148173 +  -8.2  -3.53444   AGCCGCCGCGCCTCG              GCGTGG ATAT CCGCGC               TTTCGAACGCGGTGA  61 167
CXD94_RS15325 NONE
CXD94_RS15330 NONE
CXD94_RS15335 3153646 .. 3153682 +  -5.1  -3.02144   CGTCATCAGTGTCAG    CATCGGCCGGTTGGT CGACAGC ACCAGCCCGTCTATG    TATTCCAGCCCCTGC  46 127
CXD94_RS15345 3157743 .. 3157771 +  -4.4   -3.2614   AGGCCACCGCGGTGC       CGCG-CGCGGCCG GCAC CATCTGCGTCGCG        TTGGTCTGCAAGGTG  47 226
CXD94_RS15370 3163611 .. 3163646 +   -24  -3.73224   ATTCAGAGCGATCAC    TTCGGCGGGCGCGCCT TGCA GGGCGCGCCCGCCGCA     TTTGGTAACAACTAA 100 47
CXD94_RS15375 NONE
CXD94_RS15380 3168156 .. 3168207 + -18.2  -2.83677   AGGCCGCCTATCGGC GCCATTTGAAATGGCTCGCGCCGAC GAG GTTG-CGGGGGCCATATCAAATGGC TGTGCTGAATTCATT  86 141
CXD94_RS15385 3168917 .. 3168939 + -20.6  -4.65895   TTAGCAGCACCTTAA           GCCGCCTGGC TCC GCCAGGCGGC           TTTTTCCGTCCCGCG 100 57
CXD94_RS15390 3169864 .. 3169901 + -12.5  -2.64155   GCAGCACGGCGCAGG   CGCCGCCCGCCACGCCC GGCA GGGCATGCAGGGCCGCG    TCGATTTCCGCCAGC  62 290
         mpl NONE
CXD94_RS15465 3182763 .. 3182778 +  -2.4  -2.64354   GGGGCGCTCCTGACG              CCGCCG CGCC CGATGG               ATTCTCACTATGTAC  38 72
CXD94_RS15470 3184707 .. 3184726 +  -2.7  -2.76468   CGCCCTAAAATGCAC            GGGTGCG ACGCTC CGCTTCC             TCCTCTTCGATCCTG  40 61
CXD94_RS15475 NONE
CXD94_RS15480 3186503 .. 3186513 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS15485 NONE
CXD94_RS15490 3188423 .. 3188446 +  -5.2  -3.28712   CAGCATCCGCCACGG          TCCAGGCC GAACACCA GGCCCGGA           TTGTCGGGCGAGCCG  49 374
CXD94_RS15515 3192439 .. 3192460 +  -9.3   -4.1891   GTCGCTCAGGCGCTT           GTCGCCGGC CACC GCCAGCGGC            TTTATCTTGCCGGCC  75 332
CXD94_RS15540 3198766 .. 3198794 +  -8.7  -3.51032   GCGGCTTGCCCAGCA        GATACAGGTCGCC GAT GGCGTCCAGGATC        TTGTGCTTCACGAAT  61 307
CXD94_RS15625 3219921 .. 3219931 +  -4.6  -3.30771   CGCCGCCCGTGAAAA                 TCGC ATT GCGG                 TTGTAGAGCATGTGC  49 481
CXD94_RS15640 3222220 .. 3222232 +  -7.7  -2.54523   GATCGGGCCAAAGGG                CGTAC GGC GTACG                TCCCTTCCCGTCTCA  50 43
        hppD 3231411 .. 3231431 +   -14  -3.60151   GCCTGGCGCGAGTAA            GGCCCACC CTCGC GGTGGGCC            TTGTCATTTCGGGCG  78 46
CXD94_RS15700 3235313 .. 3235325 +  -9.1  -3.18681   GAGCACGACCTCGCC                CTGGC CGC GCCAG                TTGATGACCTTGCCC  59 384
CXD94_RS15710 3237037 .. 3237050 +  -5.2  -3.21099   TGCATGAATACTGCG               CGCG AGTTAC CGCG                TTGATGCTAGAGCAG  49 450
CXD94_RS15735 3238990 .. 3239029 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD94_RS15740 3240255 .. 3240270 +  -6.1  -5.24129   TACAGAAAACCAAAC              GGCAC CACCAA GTGCC               TTTTTTGTGCCCGCC  90 220
CXD94_RS15745 3240819 .. 3240833 +  -4.2  -2.94411   GCATGAACTAAGGAG               ACCATG AAT CATGGA               ATTGTTTGACAACCT  44 30
CXD94_RS15750 3242372 .. 3242389 + -14.1  -6.11644   GCCGGCCGGCGCGAA             CCGGGCC CTCG GGCCCGG              TTTTTTTTTGCCTCG 100 63
CXD94_RS15755 NONE
CXD94_RS15760 3245160 .. 3245199 + -26.5  -3.05384   CTGCGCGACTGAGGC  CGCGGCGCCGGCCGCTCG CAGCC CGGGCGGCCGGCGCC-CG  TTCGATCAGGCCGCC 100 29
CXD94_RS15790 3249207 .. 3249229 +  -6.8  -2.53911   GAATGCCAGTTCGGC           CAGCCGGCGG ATG CCGTCGTCGG           TGAATTCCAGCTTCA  44 243
CXD94_RS15820 NONE
CXD94_RS15825 NONE
CXD94_RS15830 3256414 .. 3256470 +  -7.8  -2.91264   AACTCGCCGCCGCCT TGCGGCCCTG-AC-GGCGCTGGGCGCGC TGT GGGCGGCCGGCGCCGGTGCGCATCCGCA TATGTGGATCGACGC  52 15
CXD94_RS15835 NONE
CXD94_RS15840 3258043 .. 3258055 +  -4.7  -3.23637   GACGAATTTTGCACG                CCCGG GTG CCGGA                TTCAATTGATATGTT  49 56
CXD94_RS15845 3260539 .. 3260562 +    -3  -3.85698   GGCGCCGGCGGCAGC          CAGTTGCGGG CGCG CCTGCAACCA           TTTGTCCAGCGCGGC  56 362
CXD94_RS15875 3266094 .. 3266112 + -17.4   -4.4078   TCCCGTGTCGCGAAA             CGCCCCGC CTG GCGGGGCG             TTTTGCTTGGCCGCG 100 48
CXD94_RS15880 3266435 .. 3266449 +    -7  -3.08371   GCAACAACTACTGAG               GGGCGC ACG GCGGCC               TGTCTTGGCCATGTC  52 27
CXD94_RS15885 3267751 .. 3267784 +    -6  -3.34005   ATGAAGCGGGAAAGG     CGAGTACGCGCCGTG CGGAT CATGGTGC-TACGCG     TTGTCCGGCTTCATT  53 223
CXD94_RS15890 NONE
CXD94_RS15895 NONE
        metF 3270534 .. 3270544 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS15905 3271664 .. 3271676 +  -6.2  -3.01924   GAAGCGCTCGAACGC                GGCC AGAAA GGCC                TGTTCGGCGGCGCTC  48 141
CXD94_RS15930 NONE
CXD94_RS15935 3279299 .. 3279319 +    -4  -3.57561   CAAGGGTTCGGGCAT           GTCGC-GGCC CAC GGCCAGC-AC           TTTGAACAGTTCGCC  51 94
CXD94_RS15955 3284580 .. 3284619 + -15.6  -2.64099   TATCCGGGCCGCCCG  CGCGCGGGCGGCC-GCGCT GCT GGCGCTGGCCGGCTGCGCC  ATTCTGCTGGGAGCC  74 277
CXD94_RS15960 3286098 .. 3286111 +  -3.7  -2.62263   GCTGTTCTCGCTGCT               GCCGC TCGA GCCGC                TGCTGTAGGCGCGCT  40 4
CXD94_RS15985 3290722 .. 3290764 + -11.9  -3.18681   CCAGTTCGGCCTGGA CCTGC-GCACGGGTGGC-GGC GTC GCCGGCCGGCCGGGCCGCGGG TTCCTGCGCTTCGCC  64 354
CXD94_RS16060 NONE
CXD94_RS16065 3303575 .. 3303589 +  -3.4  -3.96327   GCAGAAATTCATGGC               GGCCTG CGC CCGGTC               TTTCTCCTCGACCGT  58 202
CXD94_RS16075 NONE
CXD94_RS16080 3306955 .. 3306989 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 280
CXD94_RS16100 3312943 .. 3312980 +  -7.6  -3.03124   GTGGCTGAACCGGAA   CGGCGAGGTTG-CGGCC GGCTG GGCGGGCAACCAAGCCG   TGTTCAAGAATCAGC  53 33
CXD94_RS16105 3315592 .. 3315628 + -12.9  -2.72144   TTTGATGCCCAAGGG    CTGGCGCAGTCCGCCAG GCG CTGGCGGACGGTCCTGG    GTTTCGAAAGAATCG  67 73
CXD94_RS16115 3317061 .. 3317075 +  -4.9  -2.88249   ACACCGCTGCCTGGC               GTGGC CGAGT GCCGC               TATGTGACCAATATC  44 173
CXD94_RS16220 NONE
CXD94_RS16225 3341555 .. 3341565 +  -8.2  -3.53012   CGCATCGATGGGCCC                 GGCC GGC GGCC                 TTTGCGCCGGCCGCG  62 50
CXD94_RS16230 NONE
CXD94_RS16235 3343696 .. 3343706 +  -6.8  -3.85817   AAATGCGGGGCGGCG                 CTGG CCG CCAG                 TTTCTGCGGCACCGT  63 189
CXD94_RS16245 3345998 .. 3346008 +  -2.4  -4.19238   CGCCGTTGGGCATTG                 CGGC CCG GCCA                 TTTTCCGATTCAAAA  62 92
        fahA 3347436 .. 3347463 + -21.4   -4.8622   CTCCGGCTTGCCGAA        GGTGCCTGTCCC AACC GGGACAGGCACC         TTTTTCCTTGCGGGC 100 108
CXD94_RS16280 NONE
CXD94_RS16285 3357399 .. 3357429 +  -3.9  -2.57132   CGCGCTGGCGCAGCA       GGCGCGCGG CCTCGACGAATTC CCGCACGCC       CTTGTCGCGCAGCAG  40 506
CXD94_RS16340 NONE
CXD94_RS16345 NONE
CXD94_RS16350 3372170 .. 3372188 +  -4.4  -2.62184   CCCTCGCGGATGACC             TGGTGCAC CAC GCGCTCCA             TGATCTCGGGCGAGG  40 362
CXD94_RS16360 3375232 .. 3375265 +  -5.1  -3.21099   GATGGTGCCGTGCTG     GATGTTCCCGGTGGC GCTG GCCTGCGGCAACACC      TTCGTGCTCAAGCCG  49 495
CXD94_RS16370 3378126 .. 3378146 +  -3.8  -3.11459   AGGGCGGGCCTGGCC            CGCCCGCG CAACC CGAGGGAG            TTCCATGCTGGTATT  45 46
CXD94_RS16375 NONE
CXD94_RS16380 3380248 .. 3380301 + -15.3  -3.01712   TGGGCGAGGACATCG TCACGGCCA-GCGCGCGGCG-GCGG CGCGAA CTGCGCGCCACGCGCATGGCCATGG TGTTCCAGGAGCCCA  77 291
CXD94_RS16390 3383080 .. 3383090 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS16395 3384324 .. 3384340 +  -2.1  -4.62783   CTTTTAGCCAGTTTC              CGGATGA ATT TCCGCCG              TTTTTCGGCTACGTC  70 255
CXD94_RS16445 3391526 .. 3391566 +   -14  -2.80816   ACCTTGCTGGACCGC GCCTGGGGGCTGGAGGCGC ATTC GCGCCTG-AGCTGCCAGGC  TATCGTGGCTGGCGA  71 268
CXD94_RS16470 NONE
CXD94_RS16475 NONE
CXD94_RS16480 NONE
CXD94_RS16485 3398380 .. 3398407 +  -8.2  -3.78775   ATGACCTTGTCGGCG        TCCTCGCCCGCC AGCG GGCGGCCGCGGC         TTTGCTGGTGGCGCA  67 131
CXD94_RS16560 NONE
CXD94_RS16565 NONE
CXD94_RS16570 3415918 .. 3415932 +  -7.8  -3.30771   GGCCTGGCCATGGCG               CAGGTC GAC GGCCTG               TTCTGCGCCATGTCC  56 163
CXD94_RS16580 NONE
CXD94_RS16585 3419073 .. 3419107 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS16600 3423385 .. 3423407 +  -4.8  -4.67982   GGCCTTATCCGTCTG           GCAGGTCATG GGG TATGGCCTGG           TTTTCTTCGGTGGCA  75 224
CXD94_RS16610 3425477 .. 3425500 + -13.8  -2.54702   TGGGTGCGCACCGGC          GCGCGCTGGC GGTG GCCAGCGAGC           TGCCTTCGCGTCTGT  69 511
CXD94_RS16640 3429189 .. 3429199 +  -8.2  -3.53012   GTGTGGATGGTGACG                 CGGC ACG GCCG                 TTTCAGCGCCCGCAG  61 275
        gloB NONE
CXD94_RS16660 3432496 .. 3432521 +  -3.3  -2.71712   GCGCCCGTCCGCCAA         GCCGCTA AAATTCCTACAA TAGCGGC          CTTTCCGCAAGGCAA  40 64
        fabI 3433369 .. 3433397 +    -6  -3.78419   CCCCGTAGGGGGACT        GGCACCGG CCAAATTCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 57
CXD94_RS16670 3434624 .. 3434653 + -17.9  -2.62616   CTGTCCCCGCAGGGA       GGGTGCCTGTCCC CGCC GGGACAGGCACAC        TGCTGTACGCCATCG  85 56
CXD94_RS16680 3436346 .. 3436379 +  -8.9  -3.53091   CCTCGATACGGCACG     TGCTGCAACCAGGC GCCGCTG GCCTGGC-GCAGCA     TTTCGCCGGCCAGGT  61 460
CXD94_RS16700 3440117 .. 3440127 +  -4.6  -4.12188   AGACCGTGTGGGGCA                 TCGG CTA CCGG                 TTTTCGCCCTGATGA  62 3
CXD94_RS16705 3441566 .. 3441618 + -14.1  -3.33696   TGCGAAGGCTTGACC CGCCGGCCG-CGCCG-TC-AGGCGCC CGGC GGCGGCAAGAGCGGCACCGGCCGGCG TTCCTTGCCGAACAC  75 28
CXD94_RS16720 3445912 .. 3445949 + -16.9  -3.18274   CCCGACAATCCGCTG   TCGCCGGCCGCC-CTCCG CTT CGGGCCGGCGGCCGGCGC   TTCCATTCCAATCCA  84 85
        minC 3446904 .. 3446922 +  -2.4  -3.86346   GCCTTCATACGCTTT             TTGCTTTA CGA TAACGCGA             TTTGTACGCACATAA  54 87
        minD NONE
        minE 3448191 .. 3448209 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 191
CXD94_RS16785 3458523 .. 3458542 + -10.6  -5.50499   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTACCTGTAA 100 49
        uvrA NONE
CXD94_RS16800 NONE
CXD94_RS16805 3466598 .. 3466640 + -14.1  -3.07935   AGGTGCAATACCACT GACT-CCGGTGCCTGTCCCC GCAG GGGGACTGGCACCGGCAAAC TTCCGTGCCTGCCGT  72 24
CXD94_RS16810 3468299 .. 3468314 +  -2.4  -3.01712   CCGGGCTTGCCCAGC              GCGGCG CGGC TGCCGA               TATTGACGACCCGCC  41 437
CXD94_RS16825 3471392 .. 3471426 +  -5.4  -3.53811   GCCTTGCTCGCCGCC     GCGCCTGCCGCCTGAC CAT GTCCGCCGCCCGGCTC     TTTGCCCGCAGTCCC  54 11
CXD94_RS16830 3472645 .. 3472669 +  -9.1  -3.01712   GCTTCGGACAGGTCG          CCGGCGCGCAG CGC CAGCGGGTCGG          TCTTGCCGCCGGCGC  55 524
CXD94_RS16840 NONE
CXD94_RS16845 3475346 .. 3475363 +  -2.6  -3.05463   CGCGGGCGCGGCGTT             GGCGGT ACACTG ACAGCC              TTCCATCCAGCCGGT  41 52
        pdxH NONE
CXD94_RS16855 NONE
CXD94_RS16860 NONE
        purU 3478632 .. 3478646 +  -5.6  -3.05384   CGAAATGGCGCAAGG               CCGCCT GCA AGGCCG               TTGCCTGCAGGGACG  46 65
CXD94_RS16890 3484480 .. 3484504 + -12.8  -3.65902   GCAAGTGCAGTTTCG          CGCCACGCGC ATCCG GCGCGTCGCG          TTTCACTGGCATCGC  77 90
        apaG 3490752 .. 3490782 + -10.3  -4.13945   CATGCCGCGTACACT       GCACTGAGCCGGG CTCCT CCCGGCACGGTGA       TTTTCCGATCCGCAT  78 19
CXD94_RS16930 NONE
CXD94_RS16935 3493240 .. 3493264 +  -3.4  -3.08032   GGCAACTCATCGAAG         GGGCCTCGCGC AATT GAGCG-GGCCG          TCGTTTTCAGGAGCA  44 9
CXD94_RS16940 NONE
CXD94_RS16945 3495269 .. 3495303 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 207
CXD94_RS16965 3498771 .. 3498785 + -11.4  -3.57144   CACGGTGGCCAGCGC               CAGGGC CTC GCCCTG               TTTGCGCGTGCGCAC  71 267
CXD94_RS16975 3501170 .. 3501189 + -16.4  -3.75153   CCGCCCGATTGCCGA            CGCCGCGC GCAT GCGCGGCG             TTTCCATTGGCGCGC  88 81
CXD94_RS16995 3504551 .. 3504563 +  -3.3  -3.04792   ATTGATGCTGCGCAA                GCGCT CGT AGCGA                TATTAACCATCGTGA  42 16
CXD94_RS17000 3505529 .. 3505549 + -14.7  -2.52676   ATCCCAAATTTTCGG            CGTCCGCCA TGG TGGCGGGCG            TCCGTTAGCAAGATC  71 40
CXD94_RS17005 NONE
CXD94_RS17010 NONE
CXD94_RS17015 NONE
CXD94_RS17020 3508651 .. 3508689 + -12.2  -3.53012   GTGCCGCCCATCCTA   CGGTAGGGCGGGGACAGC CCG GCTGAACCCGCCAAGCCG   TTTCAACAGGAAAGC  74 67
CXD94_RS17025 NONE
        atpD NONE
CXD94_RS17035 3511521 .. 3511548 + -18.6  -2.91924   CCGCCGCGTCAGGCA        GACAAAGGCGAC TTCG GTCGCCTTTGTC         GTTTCTGGCGCATCC  89 58
CXD94_RS17040 3512604 .. 3512633 +  -2.2  -3.09581   CCAGGGCAGTAAAAT       CACGGCT-TCC GATCACCAA GGATAGTCGTG       TCTGTTGCCCCTTTG  42 74
CXD94_RS17045 3513899 .. 3513916 +  -4.1  -3.60048   GGCACGACCCTGAAA             GCTCACA CCCT TGTTAGC              GTTTTTTCCCCAAAG  51 217
CXD94_RS17050 3516118 .. 3516144 +  -5.7  -2.62184   CGCTGGAGATCTGAG        CGGGGCCG-GCG CCGG CGCTCGAACCCG         TACTCTGACCGAACA  44 27
CXD94_RS17055 3518263 .. 3518273 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS17060 3519341 .. 3519382 +  -8.5  -3.14132   GGCGTTGCGGAGGGG GGAACAAGGTGCCTGTCCC CACG GGGACAGGCACCCACGCCC  TTGGTGCAGGGACAG  56 89
CXD94_RS17110 3530491 .. 3530503 +  -9.1  -3.33696   GGCGCGGTCGGCCTG                GCGCA GCA TGCGC                TTGCTTACGCGCAGC  59 219
CXD94_RS17125 3532886 .. 3532900 +  -2.7  -4.21607   CGCATCTGACGCCGC               GCGGG CCCAT CCCAC               TTTATATTCCCTCGA  63 32
CXD94_RS17130 3534068 .. 3534082 +  -3.4  -3.78934   CCCTCAAGGCGTACG               CGTAGC GCA GCCGCG               TTGTTGTGCGCGCCG  56 21
CXD94_RS17145 3537505 .. 3537518 +  -2.3  -3.07935   GGTACAATGTCGCCT               CTTCG CGCC CGTAG                TTCAATGGATAGAAT  41 184
CXD94_RS17150 3537569 .. 3537584 +  -4.6  -3.53224   ATACAGGTTCGATTC              CTGTCG GGCG CGCCAG               TTTCCCAAGGCCCTA  52 11
CXD94_RS17155 3538672 .. 3538682 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS17160 3539829 .. 3539851 +  -5.5  -3.15579   CTGCCCATGCGCCGT          GGCG-GCGTC GGCC GGCGTGCGCC           TTGCTCCCCGGTTGC  49 168
CXD94_RS17165 NONE
CXD94_RS17170 NONE
CXD94_RS17175 3543364 .. 3543400 + -10.9  -3.15544   CGGGCCACTGCGCCT   GGGCGGCGCAGTCGCGC ACGAA GC-CGA-TGCGCCGCGC   TTCGTCGGCGTCGAA  64 217
CXD94_RS17195 3546748 .. 3546800 + -27.1  -3.02144   CTGGGCCGCGCCCAA CGCCGGCTGAAGCACGGCGG-CGC GGGCTG GCGGCCGCCGCGCTTCAGGCGGCG TCTTCGAGCGCCTGG 100 16
CXD94_RS17210 NONE
CXD94_RS17215 3551330 .. 3551359 + -11.3  -2.62263   CGGACCTGTTTCCCG       ACGCCGGCCAGCG GGTG CGCTGGATGGCGC        TGGTGTCGGCGACGT  59 509
CXD94_RS17225 3553625 .. 3553677 +  -9.2  -3.04501   GCGGTATTCGGGCTT GCC-C-TGCAGTAGCAGCCGCACGCG CACGC CGCGCGCGGCGGC--CTGCATGAGGC TCTTGCGGAATTGAT  55 403
CXD94_RS17280 NONE
CXD94_RS17285 NONE
        lptC NONE
        lptA NONE
        lptB 3569091 .. 3569106 +  -3.2  -3.66288   TCAAACGTACACAAT              CTTGCG CTAG CGCAAC               TTGTATTGGCCAATA  53 108
CXD94_RS17310 NONE
CXD94_RS17315 3571362 .. 3571374 +  -4.7  -2.71144   CACGTCCAGCGGCGT                GACCG CGC CGGCC                TGGTTGCCCCAGCTG  43 127
        rapZ NONE
CXD94_RS17335 3575385 .. 3575395 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS17340 3576815 .. 3576849 +   -10  -3.41229   CCGGTTGCGCCGGGT    CCTGCTGCGCCTCGC CGCTGA GCGA-GCGCGCCAGG     TTCTGCTCGAACTAT  65 441
CXD94_RS17400 3587814 .. 3587835 +  -7.3  -4.61873   CCACCAAGAATTCGA           TGCCCAG CCCTTGCA CTGGGCA            TTTTCATTTGTGCGC  79 35
CXD94_RS17450 NONE
CXD94_RS17455 3603296 .. 3603351 +  -7.4  -4.18197   CGTCCAGCGTGATTT CCACGATGGCCGTCAGCGTGCTGCCCA CCT TGGCCGGCGCGACGATGGCCACC-TGC TTTTCGATCACGCCT  73 304
        glmS 3605814 .. 3605852 +  -8.1  -2.56715   GCAGGCGGGCGATAT  CCATCGG-CGCG-CGCTGC ACG GCCTTGTCGCGCCCGATGG  TGCATTCGTCCAGGT  48 330
CXD94_RS17485 NONE
CXD94_RS17490 3612052 .. 3612106 + -20.2  -2.50779   TGACAGTAGGCGGCC CAGGCTGGCGCGCATGCGTCGCGGCAA GGCC TTGCCGCGACGC--GC-CGCCGGCATG CTGTTGGCTTGTCAT  95 38
CXD94_RS17495 3613555 .. 3613566 +  -7.2  -3.51934   ACCACATCGACCGCC                GCGC TCCA GCGC                 TCTTTCTGCAGGGGC  58 449
CXD94_RS17510 NONE
CXD94_RS17515 NONE
        argE 3618195 .. 3618244 +    -2  -3.50133   GGTAGTGGTGATGTA CCCCCCCGTCACGAACGCCGGGCT TTCG GGTCCGG--TCCATGACGGTGGCG CTTTTTCTACAACTA  48 74
CXD94_RS17525 3619305 .. 3619329 +   -20   -3.3514   ATCGACTGATCGCGG          CGGGCGCCCG CGGCC CGGGCGCCCG          TTGTGCCGTGTCGGT 100 32
CXD94_RS17530 3620646 .. 3620663 +  -5.5  -2.71712   CAGAAGAACATCATT             TCCAAGG CCAT CCTGGGA              CTTTGAGCGAGAGGC  45 2
CXD94_RS17535 3621955 .. 3621974 +  -3.4  -3.65812   TCAGTTCGGGCTTGG            CGTCGTAC AGGT GGCCGACG             TTGTGTTCGGCGGGG  51 167
CXD94_RS17550 3625888 .. 3625898 +  -8.2  -3.35813   TCGGCAACTTCTTCG                 GCGC CGA GCGC                 TTCGTTCCCATCACC  60 176
CXD94_RS17560 NONE
CXD94_RS17565 3627594 .. 3627628 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS17580 3630997 .. 3631031 +  -8.5  -2.71364   CCGCGTAGAGCTCGC    GGCTGATCACGCC-CC GGGT GGCGGCGTGCTCGGCG     TACTTGGCGCCCTGC  52 504
CXD94_RS17630 NONE
CXD94_RS17635 NONE
CXD94_RS17640 3642755 .. 3642771 + -15.1  -5.75945   TTCCGTTTTCCTCCT              GCCGCGC TCT GCGCGGC              TTTTTTTTGGGGCGT 100 55
CXD94_RS17645 NONE
CXD94_RS17650 NONE
CXD94_RS17655 NONE
CXD94_RS17660 NONE
CXD94_RS17665 NONE
CXD94_RS17670 3649643 .. 3649679 +  -9.9  -3.69395   GGGCAGCGGCCGCCG    CAGCACGGTGGCCGGCG CGG CGCTGGCCAACGCGGCG    TTGTTCCATGGTCGA  70 303
CXD94_RS17680 NONE
CXD94_RS17685 NONE
CXD94_RS17690 NONE
CXD94_RS17695 NONE
        lpdA NONE
CXD94_RS17705 3657773 .. 3657794 +  -4.3   -2.5474   GGCCTGCGCCAGCAG           CC-GTTCGGC GTT GCCGTGCAGG           ATCTTCTCCATCGCG  42 103
CXD94_RS17725 3662401 .. 3662434 +  -7.3  -3.65902   GTCAGCGGGTGCCTG     TCCCCCGTGCGGG GACAGGCA CCCGGGTGGGGGG      TTTACATGCGCTCGA  61 50
CXD94_RS17735 NONE
CXD94_RS17740 3664727 .. 3664765 +   -11  -3.20723   TGCCCGCTGCCGATG  ATGC-CCACCAGCGGCG CGAACA CGCCGGTGGTGGCGCAG   TTGAGTTCCTCGACA  64 224
CXD94_RS17765 NONE
        grxC NONE
        secB NONE
CXD94_RS17780 NONE
CXD94_RS17785 3672950 .. 3672987 + -13.3  -2.79183   CGCGAAGATGCGCGG   CGCAGCCGC-GCCGGTGG CCG CCAGCGCCTGCGGCAGCG   TGTCGTGCACCTGCA  67 293
CXD94_RS17800 3675139 .. 3675151 +  -9.1  -4.09685   GGTGTCCTGGACGCC                CTGGC CGC GCCAG                TTTTGCGCCATGGAC  72 173
CXD94_RS17855 NONE
CXD94_RS17860 NONE
CXD94_RS17865 NONE
CXD94_RS17870 3690992 .. 3691042 +  -8.1  -4.32857   GAGGACGGGCTCCCA GGGTTCGGCAGGTGCCTGTCTCC CGTGC GGGGACAGGCACCTGAGTGTCAC TTTGTCTTTGCCAGC  77 49
CXD94_RS17905 3697406 .. 3697433 +  -6.2  -3.17714   GCGGCTGTACTGATT        GTTGGCGTCGAC CAGC GTCGACAGCAGC         TTCATGAAGATTTCG  50 69
CXD94_RS17945 3706858 .. 3706870 +  -7.7  -3.61398   CAGCGCGATCGTGCC                CGTCA GGT TGACG                TTCTTGGGAAACCGG  60 299
CXD94_RS17955 NONE
CXD94_RS17960 NONE
CXD94_RS17965 3709508 .. 3709518 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS17975 NONE
CXD94_RS17985 NONE
CXD94_RS17990 3712774 .. 3712816 + -14.2  -3.33696   CATGAAGCACTGATG CGGTACG--GGGCGG-CGGCC CGCA GGCCGTCCGCCCCGCGCACCG TTCATTCCAGGCGGA  75 28
CXD94_RS18005 3716145 .. 3716169 + -14.9  -2.90075   CGCCGGTATCGATTT          CGCTGGCGGCC TGA GGCCGCCGGCA          TATGGTTCGAACGCC  73 12
CXD94_RS18010 3717727 .. 3717741 +  -2.7  -3.72576   AGGCCTGGCCGGACA               GCGGC AACGG GCCGA               TTTCCTGCAGCAAGG  53 464
        kynU NONE
CXD94_RS18040 NONE
CXD94_RS18045 NONE
CXD94_RS18050 3723736 .. 3723763 +  -3.2  -3.54424   CCCGTTCTTGATGTC        CGCGGC-GCGCGC GCC GCGCCCTGACCCG        TTTCCGACCGTCCCA  49 49
CXD94_RS18055 3724984 .. 3724998 +    -7  -2.62983   CGAAGCGCGCCAGCA               GCGCCG GTT CGACGC               TGATCTCGGCCTGCC  48 293
CXD94_RS18080 3727993 .. 3728020 + -19.2  -3.02324   GCGCCGTGTTGATTC        GGTGCCTGTCCC GACA GGGACGGGCACC         TGTGCTTTCGATCAG 100 57
CXD94_RS18095 3731167 .. 3731208 +  -6.5  -3.11634   CCGGCCGAATCGCTG TCGGTGCCGGTG-AGCGATC TGT GATCGGTGCGCCTGCACGGG TTCCGTCATCTGGGG  51 2
CXD94_RS18100 3732354 .. 3732404 + -18.9   -3.6579   GAGCGATCGACAGGG CGGCGGCGCCTGGCCGATGGCAGC CGGC GCCGCCGCCGGCCAGGCGG-GCTG TTGTTAGAATCCCTT  95 39
CXD94_RS18105 3733265 .. 3733299 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS18120 NONE
        rocF 3736445 .. 3736455 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 80
CXD94_RS18130 3737614 .. 3737628 +    -7  -3.41693   GCCCGATTTGGCGTA               GCCGGC CAC GCCCGC               TTCGTTCATGGTGGG  58 180
CXD94_RS18195 3753385 .. 3753411 +  -2.1  -3.61178   CCCTGGCTGCAGGCG         TTCCGGCCTGC CGTCC GCTGACCCGAA         TTTCCGATCCATCCG  48 5
CXD94_RS18200 3754623 .. 3754637 +  -2.7  -4.07568   GCAATACGCTATGCT               CGACG CGCGC CGCCG               TTTTCGCCGGCGCAG  59 70
CXD94_RS18205 3755078 .. 3755102 +   -15  -4.57073   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG 100 49
CXD94_RS18220 3757565 .. 3757575 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 71
CXD94_RS18225 NONE
CXD94_RS18230 3759253 .. 3759269 + -10.8  -5.10497   GGCCGTAGTTCAACA              GCCCGC CTCGA GCGGGC              TTTTTTGCGTCGGTT 100 47
CXD94_RS18235 3759675 .. 3759685 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS18245 3760678 .. 3760723 +    -6  -2.89564   TACAACCTATTGACA GTTCACACCTAACCCCCACC CGCCCC GGTAGGGGCTAGGAGATAAC TGTGTCCGATACCAA  48 14
CXD94_RS18250 3761281 .. 3761291 +  -2.4  -3.39895   GTGCAGGTAATGGCC                 CAGC TCG GCGG                 TTCGTTCATGAAGCA  46 114
CXD94_RS18260 NONE
CXD94_RS18265 NONE
CXD94_RS18270 NONE
CXD94_RS18275 3763624 .. 3763638 + -12.8  -3.02511   CCGCCTGATCTCCCT               GGGCGG CGC CCGCCC               TATTACCCACGTAGC  67 33
CXD94_RS18280 NONE
CXD94_RS18285 NONE
CXD94_RS18290 NONE
CXD94_RS18295 NONE
CXD94_RS18300 3766468 .. 3766478 +  -8.2  -3.54424   CAGCAGCTCGCCTGA                 CCGC ATG GCGG                 TTTCGAGGGATAGCA  63 406
CXD94_RS18320 3771474 .. 3771502 +  -4.4  -3.44622   ACTTCGACCGATTCC        CCGCGCTGGTTG GTCAG CGGCCAGCGCAC        TTCGTTCTGCGGGTC  49 329
CXD94_RS18335 3773704 .. 3773723 + -16.4    -3.767   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC  91 219
        dnaA NONE
CXD94_RS18365 3779334 .. 3779347 +  -2.3  -5.03145   CGCGCGCGAACGGTG               TGGCC GTGA GGCTG                TTTTTTAAGGCGTTA  79 81
        gyrB 3781854 .. 3781875 + -13.7   -4.4078   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG 100 53
CXD94_RS18380 NONE
CXD94_RS18385 3785637 .. 3785691 +  -6.3  -3.76759   CCTGCAGGCGTGCGC GAGGGGCGGCGTAT-ACTGGCTCTCGC CGC GCGAAGGCCGGCCAT-CGCCGTGCCGC TTTCCTGACCTTCAT  62 369
CXD94_RS18395 3786929 .. 3786979 +  -6.3  -3.44848   GCAAAATCTGCAAAG CGGG-CTT-GGCTACATTGCGTTC ACTGGA GATCGCA-TGAAGCCCAAGACCCG TCTTTACTACGCCGA  55 79
CXD94_RS18400 3787823 .. 3787836 +  -9.5  -3.26471   GCGTTGCAGGCCCGC               CCGGG CCGG CCCGG                TTACTATGGCCGTAG  61 40
CXD94_RS18410 3790294 .. 3790333 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CXD94_RS18415 3791826 .. 3791855 +  -8.7  -3.09681   ATGATGCAGTGCAAA       TATTACGTTTACG TAAA CGTAAACGTAAAG        TTGAGTCGGGTTTTC  56 487
CXD94_RS18430 3793619 .. 3793653 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 218
CXD94_RS18450 3798543 .. 3798556 +  -3.1  -2.79796   CATCAACGCCCCACG               GGTAT GCCC ATGCC                TATCATCGAATCCCG  40 117
CXD94_RS18455 NONE
CXD94_RS18460 3802223 .. 3802261 +  -6.7  -3.14931   CGCTGATCGAAGTGA  AG-TGA-ATGACGCCGGGC GCG GCCCGGCGTCGGGTCAGCC  TTGCTCCGGCGTGAC  52 21
CXD94_RS18475 3805029 .. 3805066 +    -9  -2.70932   TGCCCAGCGCCGGCG   CGGGCGCGCCG-GGCTC CACCC GCGCCACGCCGTGCTCG   TCGTTGGCGGCGAGA  52 188
CXD94_RS18485 3807247 .. 3807259 +  -6.2  -2.64155   CGTCCCGACTCCAAT                GCGC CAATC GCGC                TGCCTTTCCGCCAGG  46 70
CXD94_RS18490 3809384 .. 3809413 + -20.9  -3.29144   CGGGCGCCGACGCAA       TGCACAACCCACC GCAA GGTGGGTTGTGCA        TTCTGGACGCGGTCG 100 59
CXD94_RS18495 3811852 .. 3811871 +  -3.4  -4.07568   GAAAACGTGAAGACC            GCGCGCAG CGCA CTGCCCCC             TTTTACAGAGCCGCG  59 87
CXD94_RS18500 3812541 .. 3812576 + -16.8  -2.70525   GATGCGGCCGCGCCA    GACATGGCGCGCCGGC CCGT GCTGGCGCGCCATCGC     ATTGATTTCCGGAAC  80 39
CXD94_RS18515 3818844 .. 3818866 +  -5.4  -3.50853   GCACCGCGCGGTCCA           CGCGACCGAC GCG GCCAGTTGCG           TTATCGTTGCCGCAA  54 102
CXD94_RS18520 3819968 .. 3819978 +  -8.2  -2.82635   GCGATTCGTGCGCAA                 GGCC CGG GGCC                 TGTGATGATCGAGCT  54 10
CXD94_RS18525 NONE
CXD94_RS18530 NONE
CXD94_RS18535 3822395 .. 3822416 +  -3.5  -3.64822   AGTTCTGAGCTTGCC           CGACCCGCG AGGC TGCGCGCCG            TTTCCCTGCAGGACT  54 33
CXD94_RS18540 NONE
CXD94_RS18545 3825122 .. 3825169 +  -2.7  -3.02511   TGGCGGTGGACAACT CC-TGGATGTTCATCAGCACCGA CGCG TCGCCGCTGACGCACA-CCACGG TCTTGCCGGGATGCG  41 467
CXD94_RS18555 3827268 .. 3827284 +  -5.7  -3.28712   GATCGCGCGCCAGCG              CGGCCAG CGG CAGGTCG              TTCTCGGCCAGGCCG  52 137
CXD94_RS18565 3828974 .. 3829004 +  -8.9  -3.21063   TGTGCCGGCACTTTC      CCGC-CAGACGGGC GCTC GCGCGCCTGCGCGG       TATTGCGTTTGGCTG  56 299
CXD94_RS18570 3830011 .. 3830021 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 270
CXD94_RS18580 3831062 .. 3831110 +  -9.7  -3.03159   CGGCGCACGTCCTCT TCGGCG-CGGCC-GCTGCGCGCCAC GTA GTCG-GC-CAGCTGGTCGGCGCCGA TGTTGCCCACGTTGA  59 62
CXD94_RS18590 NONE
CXD94_RS18595 3837933 .. 3837955 +  -8.4  -4.05714   CGCGGCTGAGCCCGC          GC-CGCCGG CCAGCC CCGGCGTGC           TTTATCATTGGCCCT  72 32
CXD94_RS18600 NONE
        thiD 3839717 .. 3839727 +  -3.2  -4.21462   GTTGACTCCCCTATA                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  63 67
CXD94_RS18610 NONE
CXD94_RS18615 NONE
CXD94_RS18620 3841961 .. 3842001 +  -6.8  -3.05268   CGTGAAAAGAAGTCA CCGCGTCGACGCAGC CCAGGGCCGCCA GCAGCG-CGGCGCGG  TCTTGCACCTGATTG  48 246
CXD94_RS18630 3843619 .. 3843632 +  -3.7  -2.87132   GCGCCCTGCGACCCG               GGCGC GCCC GCGCA                TCTGTAACAGGGACG  43 97
CXD94_RS18635 NONE
CXD94_RS18640 3845760 .. 3845791 +  -4.4  -3.72576   CAGGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  55 92
CXD94_RS18645 3847171 .. 3847205 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CXD94_RS18660 NONE
CXD94_RS18665 NONE
        fusA NONE
         tuf 3853124 .. 3853149 + -11.1  -4.62203   AGCAGTACCCAACCA         GTGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CXD94_RS18680 3853521 .. 3853560 + -20.2  -3.53091   TGTGGCGCAGCTCGT  GAAAAATGGCCGCATTCC CCCG GGAGTGCGGCCATTTTGC   TTTGGCGCGACAGCT 100 63
CXD94_RS18685 NONE
CXD94_RS18690 NONE
CXD94_RS18695 NONE
CXD94_RS18700 NONE
CXD94_RS18705 NONE
CXD94_RS18710 NONE
CXD94_RS18715 NONE
CXD94_RS18720 NONE
CXD94_RS18725 NONE
CXD94_RS18730 3858644 .. 3858666 + -17.8  -5.84381   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG 100 70
CXD94_RS18750 NONE
CXD94_RS18755 3862741 .. 3862752 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAGTT  44 31
CXD94_RS18760 NONE
CXD94_RS18765 NONE
CXD94_RS18770 NONE
CXD94_RS18775 NONE
CXD94_RS18780 NONE
CXD94_RS18785 NONE
CXD94_RS18790 NONE
CXD94_RS18795 NONE
        secY NONE
CXD94_RS18805 NONE
CXD94_RS18810 3867837 .. 3867856 +  -2.8  -3.08812   GCGTCAAGGCTAACC            CAGTTAGCG GTA CGC-AACGG            ATTTATTCAAGGAAC  44 28
CXD94_RS18815 NONE
CXD94_RS18820 3868636 .. 3868651 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  44 3
CXD94_RS18825 3869366 .. 3869395 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  78 98
CXD94_RS18830 3870504 .. 3870532 + -21.7  -2.84218   CCGTAAGCAGTCAAG        CGCGGTGGGCGCG CCA TGCGCCCGCCGCG        ATGTTTTCATGCATC 100 35
CXD94_RS18835 3871069 .. 3871098 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCGCGCG 100 46
CXD94_RS18845 NONE
        dsbD 3873931 .. 3873984 +  -3.1  -3.04144   GCTCCTGACGTTGCT TCGTATC-GCCTCGGGCGCGC-CCG AGGCGA TGGCGTGGGCGAGAGGCTGGTACGA TGTTGCCCATACCAG  42 33
CXD94_RS18855 3875183 .. 3875193 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGGCGC  52 207
CXD94_RS18870 3877646 .. 3877672 +  -6.4  -5.14563   CCGTTGTCTATGAGG         GGGGGGAAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAACGC  90 112
CXD94_RS18875 NONE
        ccsB 3881136 .. 3881165 + -22.3  -3.54459   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 44
        cyaY 3883508 .. 3883561 + -17.3  -2.80816   CGACGTCGCTGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCACGCAGCA TATCGTCCATGACGA  78 513
CXD94_RS18905 NONE
CXD94_RS18910 NONE
CXD94_RS18915 3888592 .. 3888647 + -14.6  -5.14965   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCCGGCGGA TTTTTTCGTCCGCGT 100 120
CXD94_RS18930 3893701 .. 3893719 +   -16  -3.44848   GCTTCACCCAGTATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  82 142
         ssb 3894349 .. 3894364 + -10.4  -5.78622   CGCTGGATGCGAAAG              CCCTGC CCAG GCAGGG               TTTTTTTTCGCCTGG 100 57
CXD94_RS18940 NONE
CXD94_RS18945 3897190 .. 3897202 +  -4.8  -3.32844   GGGCTGGGCCGGGCC                GCGA TCGAT TCGC                TTATCCGCTGACCGC  49 2
CXD94_RS18950 NONE
CXD94_RS18955 NONE
CXD94_RS18960 NONE
CXD94_RS18965 3900072 .. 3900114 +  -7.4  -2.79796   GCCAGCATATGGGGC ACCTGCACCGCCACGTCGCG CGT CACGCCCAGGCGTTGCAGGG TGTCCTGCAATACGC  49 284
CXD94_RS18975 NONE
CXD94_RS18980 3903658 .. 3903688 +  -3.2  -2.63301   GGATCTTTCCTGCCA       GCAGTGTGTCTATG TAC TACATTCACACTGC       TACTCTCAGAATGTC  39 137
CXD94_RS18985 NONE
CXD94_RS18990 3905703 .. 3905726 + -17.4  -3.28712   GCCCCGCAGCGGGGC          GCGGCTGGCC GCAA GGCCGGCCGC           TTGTCGCCCGCACGC  86 59
CXD94_RS18995 NONE
CXD94_RS19000 3907845 .. 3907868 + -17.4  -3.97331   GACACGATTGTCCTG          CCGGCGGGCG AGGC TGCCCGCCGG           TTCTTTGCCTGGATT  95 44
CXD94_RS19005 NONE
CXD94_RS19010 NONE
CXD94_RS19015 3911042 .. 3911059 +  -9.9  -3.72576   TCATGATTTCCTCTT             TTCGCAC GGAC GTGCGAA              TTTAATCGAAAAAAA  71 284
CXD94_RS19060 3919610 .. 3919625 +  -4.6  -2.53382   CCGCCGATTGACAAG              CCTGGC CGGC GCTGGG               TAGATTGCGCCTACT  42 30
CXD94_RS19065 3920734 .. 3920772 + -10.9  -3.73224   AGCGGGCGCATACCT  CGCTTGAAGGCGGCGGCC GCAT GGCCGCCGTCG-CAGGGG   TTTCGTACCCCATCG  73 39
CXD94_RS19100 3925676 .. 3925695 +  -4.8  -3.35679   CCTGGCCGAAGGAGC            GGCCTGAG GCGC CGCCGGCC             TTCTCCATCCACGAA  51 19
CXD94_RS19110 NONE
CXD94_RS19115 3928835 .. 3928874 + -13.5  -2.78715   ACTGAGGCTGCGCGA TCGCCC-GC-CCGCCGCGC GTGC GCGCGGCGCCGCTGGGCGC  TATAATGCGCAACTT  67 36
CXD94_RS19120 3929448 .. 3929475 +  -8.4  -3.06831   AGACCTCCTCGAGTG        GCGCCG-TGGTGT CGA ACGCCATCCGCGC        TTGCGTGAACGTTGA  55 477
CXD94_RS19135 3931448 .. 3931479 +   -13  -2.89668   CATCCCCGACCAGCT      GACCGACTGAGCGC CGGC GCGCTCAGTCCATC       TGTATCCCGCTCTTG  69 16
CXD94_RS19190 3943143 .. 3943155 +  -5.5  -3.55622   ACCTCGCGGTGCACC                GCGTC CTC GATGC                TTTCGCCGACTTCGA  54 315
CXD94_RS19215 3948043 .. 3948055 +  -6.9   -3.7456   GCCCGAGAACGTGGC                CGGCG GCT TGCCG                TATTTCTTGGTGTAG  61 272
CXD94_RS19260 3957418 .. 3957433 + -10.4  -2.57132   TCGCCGGCAGCAAAC              TGCCGC TGGC GCGGCA               ATTCTAGGCGGCGGG  57 3
CXD94_RS19265 3958482 .. 3958492 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS19270 3959676 .. 3959695 +  -5.6  -3.90112   CACGGCGCACAGGAC            GCCGCGGCC GTC GGCCA-GGC            TTTCCTTCAGGCCGC  60 205
CXD94_RS19305 3966932 .. 3966955 +  -9.4   -3.1372   AGGCCTTGATGTCGT          GCGCCAGCGC TTCG GCGCCGGCGG           TATTGGTGGCCAGTA  59 220
CXD94_RS19335 3971183 .. 3971200 + -12.7  -3.21218   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  69 86
CXD94_RS19365 3976638 .. 3976680 +   -14  -3.23853   CGCCGGCGCCGAATC CTCCGAGGCCGTGCTGGCGG CGG CCGCCGCCGCGGCTTGCGAG TATTGCTTCCACACC  75 147
CXD94_RS19375 3980525 .. 3980572 +  -6.1  -4.63218   GCGGTCTGTCTTGCA TGCGCGG-GCGCCG-CGTACGGC GTCA GGCGGGGGTCAGCGCACCGCGCA TTTTCTTCAGCGCCG  78 397
CXD94_RS19400 3985261 .. 3985290 +   -15  -4.25104   CGGGGCGTTGCATGC       TGCCCACCCGGC CCCTGT GCCGCGTGGGCA        TTTTGCTGCGCCCGC  95 55
CXD94_RS19405 NONE
CXD94_RS19410 3991866 .. 3991878 +  -9.1  -3.18264   GCCTGTCCCCGCGGG                GACGG ATA CCGTC                TTAGTACGTACGGCA  59 101
CXD94_RS19415 3992700 .. 3992714 +  -7.8  -3.28712   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTGAGGCGCCCGC  56 5
CXD94_RS19420 NONE
CXD94_RS19425 NONE
        mlaE NONE
        mlaD NONE
CXD94_RS19440 3996988 .. 3997006 +  -5.2  -4.72386   GGCCACCGCCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  81 45
CXD94_RS19445 3997785 .. 3997796 +  -5.8  -4.07568   AGCCGCGCCGGCGCG                GCTG GAAG CAGC                 TTTTCGGCCAGCCGG  64 185
CXD94_RS19455 NONE
CXD94_RS19460 NONE
        murA NONE
CXD94_RS19470 4001548 .. 4001569 + -18.7  -2.61274   CATCGCCTGAACCCC           GCCGCCCGC GCCG GCGGGCGGC            CTTCCTTGCAGTACC  87 31
        hisD NONE
CXD94_RS19480 NONE
        hisB 4004558 .. 4004572 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCG  42 3
        hisH 4005303 .. 4005315 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  57 39
CXD94_RS19495 NONE
        hisF NONE
        hisI NONE
CXD94_RS19510 NONE
CXD94_RS19515 4008009 .. 4008024 +  -2.4  -2.90496   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAATTTCGGAGAACC  40 7
        tatA 4008281 .. 4008306 + -12.6    -3.889   CCTAGTCCCGGCCCG         GGACCGGC-CC ATGAC GGCGCCGGTCC         TTTCCTATCGTTCCA  81 36
        tatB NONE
        tatC 4009623 .. 4009648 +  -5.3  -2.52676   AAGTAGACGGTTTCA         CGCTTGCCGCGG CCG CC-CGGCATGCC         TACATTGCCGGCATG  44 65
CXD94_RS19535 4010164 .. 4010178 +  -4.2  -2.82327   TTCGCATACCAAATC               CTTGCC GGC GCCAAG               ATTTCAGTATGAGAA  43 43
CXD94_RS19540 4011387 .. 4011430 + -11.6  -2.52516   CCGTCCGGCCGGCAC CATCCCGCATACGTGTTGGC AACC GCCAACGCGCATGCGTGCAG ATTCGTCGTACAAAA  61 67
CXD94_RS19545 NONE
CXD94_RS19550 NONE
CXD94_RS19555 NONE
CXD94_RS19560 4013970 .. 4013980 +  -3.2  -3.63968   ATATTGCGAATGAAC                 CCTT CCG GAGG                 TTTCGACGTTTCCGC  53 28
CXD94_RS19565 4014729 .. 4014747 +    -3  -3.09785   CGGCAGCGTCGATAT             GTTGAGCC GCC GGCTCGGA             TCTGTTCGCCTGTCC  44 21
CXD94_RS19570 NONE
CXD94_RS19575 NONE
CXD94_RS19580 NONE
CXD94_RS19585 NONE
CXD94_RS19590 NONE
CXD94_RS19595 NONE
       virB9 NONE
CXD94_RS19605 NONE
      virB11 4023112 .. 4023122 +  -2.4  -4.29396   ACGCCTGCCGCCTGC                 ACGC ATT GCGA                 TTTTCGTGCATAATT  62 40
CXD94_RS19615 4023241 .. 4023262 + -15.9   -4.7497   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC 100 37
CXD94_RS19625 NONE
CXD94_RS19630 NONE
CXD94_RS19635 NONE
CXD94_RS19640 4028632 .. 4028664 +  -5.4  -3.02043   ATGTGCCTGCTTGCT      TTGCGCACCGGCGT CCATC GCGCCGCGCCGCAA      TCTTCCCACCGCCTT  47 209
CXD94_RS19645 NONE
CXD94_RS19650 NONE
CXD94_RS19655 4032423 .. 4032456 +  -5.2  -3.71873   CGCATCGAATTCCCG    AGCCGGCG-CGG-CAC GCTG GTGGCCGTCGACGGCG     TTTCGCTGTCGCTGG  57 75
        argJ NONE
CXD94_RS19675 NONE
CXD94_RS19680 4037127 .. 4037146 +    -2  -2.89475   GGATCCGCGGGCTGC            TCTGACGC AACG GCGCTAGG             TGTGATGTCTCAATA  40 21
CXD94_RS19685 4038217 .. 4038227 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS19690 4039266 .. 4039276 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CXD94_RS19700 4040454 .. 4040475 +  -3.7  -2.70932   CGCCACGCTCAGGTA           GT-CGATCAG CCC CTGCTCGTAC           TGGTTGCGCGCCAGG  40 199
CXD94_RS19740 NONE
CXD94_RS19765 NONE
        glpK 4058335 .. 4058371 +  -2.2  -3.53811   CACGCCGGCGCGCCG   GCCGCGGGGCTG-GCC AGCTGGC GGCGCAGCACCA-GGC   TTTGCGCGCCATGCA  50 138
CXD94_RS19805 4065053 .. 4065069 +  -2.2  -2.70932   CACGACACGCACGGA              GGCC AAGCATGAA GGCC              TGGTTGCGACAACAC  38 14
CXD94_RS19810 4065960 .. 4065973 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4067083 .. 4067128 +  -6.2  -3.18264   CGGCGTGCTCCAGGT TGCCGCGGTTCAGCTTGGGC AGGATCGC GCCCA-GCTGC-TCGCGGTA TTGCTCGATCAGCGC  51 280
        mutY 4071826 .. 4071836 +  -3.2  -3.28924   CCAGCCTGAAGGTGA                 TCTG CTG CAGG                 TTCTGCCGCCCGCTG  47 95
CXD94_RS19835 4073558 .. 4073568 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 144
CXD94_RS19840 NONE
CXD94_RS19845 NONE
CXD94_RS19850 NONE
CXD94_RS19855 NONE
CXD94_RS19860 NONE
CXD94_RS19865 NONE
CXD94_RS19870 4080686 .. 4080705 + -16.4  -6.06723   GGCCGAGCGTGCACG            CCGCCCCG CAAC CGGGGCGG             TTTTTTTTTCGCGCG 100 57
CXD94_RS19880 NONE
CXD94_RS19885 4083406 .. 4083431 +  -5.9  -3.61652   GACGGAAAGGCGATG         CCGGCGTCCGG CTGG CCCGCCGCCGA          TTGATTGTTTACGCA  56 53
CXD94_RS19890 4084882 .. 4084902 +  -2.4  -2.78712   AGACCAAGCCCTATC            CCAGCGAG CCATT CACGCTGA            TCGTTCCGTTCGGCG  38 209
CXD94_RS19905 4087865 .. 4087884 +  -2.8  -4.07568   GCACCGTCACGCGCT            CCAGCGTGT CGA ACAC-CAGG            TTTTCCACAGCCAGG  58 124
        mnmE 4100299 .. 4100317 +  -6.7  -2.62184   CCGCGCCGGCGATGC            GGCC-CAC GATC GTGCGGCC             TGCTATCGCGCAGCC  47 398
CXD94_RS19970 4102407 .. 4102420 +  -2.3  -3.29947   AAACCCGCCATCGCA               CGCTG AAGA CGGTG                TTGCTGTGGTGGCTG  44 49
CXD94_RS19975 4103882 .. 4103896 +  -5.7  -3.06183   TCATCCGTTGGCCTG               CGATC TGCGC GATCG               TTCCATGGCCATCCA  47 74
CXD94_RS19980 4104965 .. 4104997 + -18.4  -3.02144   AAGAAGTAAACCGAT     CGCGCGGCCGGCGGC ATGC GCCGCCG-CCGCGCA      TCTTCCCAACGGTGC  90 32
CXD94_RS19985 NONE
CXD94_RS19990 4107041 .. 4107062 + -15.9  -5.06414   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 46
CXD94_RS20000 4108871 .. 4108882 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CXD94_RS19995 4107041 .. 4107062 - -15.9  -4.65895   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 59
CXD94_RS19965 4099579 .. 4099593 -  -5.7  -4.15788   AACGTCTTCAACAAA               GTCGA TCTGC TCGAC               GCGGCGTTCCAGGGC  69 303
CXD94_RS19955 NONE
CXD94_RS19950 NONE
CXD94_RS19945 NONE
CXD94_RS19940 NONE
CXD94_RS19935 4092906 .. 4092918 - -10.5  -2.78384   GTTTCTTTTAGCACA                GCGCG CGG CGCGC                TCAGGCCTGCTGCGC  57 26
CXD94_RS19930 4091537 .. 4091557 -    -9  -3.12999   GCATGGGACATGGAA            CCGCTCCT TGTTC AGGAGCGA            TCCATTATGAAAACG  59 130
CXD94_RS19925 4090616 .. 4090626 -  -8.2  -2.57344   GACGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTGCG  52 8
CXD94_RS19920 4089508 .. 4089521 -  -2.4  -2.86676   CCGAGGAATCGAAAC               GATG CGCGCC CATC                TCAGCTTCCCTGCGC  40 26
CXD94_RS19915 NONE
CXD94_RS19910 4087789 .. 4087818 - -22.9  -3.48593   GACGCCGCGACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       GGCGGCATTCAGCGC 100 34
CXD94_RS19900 4085003 .. 4085035 - -10.6  -4.17762   GATCGTGGAAAACAA     GGCTG-GCGCCAATG GCAT CATCGGCGCGCAGCA      TGCGAAGAAGGCGAC  89 235
CXD94_RS19875 4080302 .. 4080314 -  -9.1  -3.01791   ACGGCGTCCTGAACA                TCGCC CGC GGCGA                CCGGGTCCGGATGAA  55 446
CXD94_RS19830 4071383 .. 4071413 -  -5.2  -2.52896   CCATCCCCGAACGCA       GCACGGCCATGCTG GTG CTGCACGGCCCCGA       CGGCATCCTGCTGCA  42 379
CXD94_RS19800 4062954 .. 4062971 -  -2.5     -2.97   AAATCAATCTACAGA             GTCGGAC GTTC GGCCGGC              GCGGACGCGCCGGCC  41 112
CXD94_RS19795 NONE
CXD94_RS19790 NONE
CXD94_RS19785 4059809 .. 4059843 -  -2.7  -3.53811   GCGATCCGCCGGAAA    GCCCGGCGCCAGCG CCGTTTCC CGCCGCC-CCGGCC     CGCCGCCTCAGTGCA  49 33
CXD94_RS19780 NONE
CXD94_RS19775 4057895 .. 4057908 -  -8.1  -3.14132   GCTGTCGTGCATGAA               TGCCG ACAG CGGCA                TCCCGCTGTCCGAGC  53 358
CXD94_RS19760 4054922 .. 4054949 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  43 42
CXD94_RS19755 NONE
CXD94_RS19750 4053130 .. 4053145 -  -7.6  -2.57132   GCCTGCGCCGAGAAG              CTGTCA AATT TGACAG               GATCTGCCGCGGCCG  50 45
CXD94_RS19745 4052447 .. 4052497 -   -11  -2.50935   ACGCCACCCAGGAAC GCCCGCCCCGCGTGCTGCTGCT CGACGGC AGCGGCAACATGCGCGCCGAGC TGGTCATGACCGCCA  58 248
CXD94_RS19735 NONE
CXD94_RS19730 NONE
        zapD 4049241 .. 4049255 -  -5.6  -3.55071   CCAGACCGGCCCAAA               CTGGCA GTT TGCCGG               GCGCTGCTGAAATAG  54 137
        mdtA 4047922 .. 4047951 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  52 10
        mdtB 4044858 .. 4044880 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  42 16
CXD94_RS19710 NONE
CXD94_RS19705 4040077 .. 4040111 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS19665 4032620 .. 4032649 -  -9.9  -3.16191   CGACACCTTGAGCAA       CGCCGAGCAGCGCA AGG TGCGCGGC-CGCCG       CATCGGCATGATCTT  62 140
CXD94_RS19620 4023241 .. 4023262 - -15.9  -3.91144   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC  91 66
CXD94_RS19395 NONE
        fghA 3982308 .. 3982339 -  -4.3  -4.08706   CGCCCAGTATATAAA      GCGGCCCGGGC CCGGCCTGTT ACCCCAGCCGC       TCGACGTGAAACCGG  62 13
CXD94_RS19385 3981530 .. 3981549 -    -2  -3.53012   CTGCGCCGCGCCAAA            GTTCCGGA ATTT CCCAGTAC             GCAGGATATTTTTCT  48 54
        rpoH 3980498 .. 3980517 - -13.6  -5.40474   AGGCCCCCAAAAAAA            CAGACCGC CGTA GCGGTCTG             TCTTGCATGCGCGGG 100 55
CXD94_RS19370 3976203 .. 3976218 -  -8.2  -3.66666   GCGAAAACCTGGAAA              CCGCGC TGGT GCGCGA               ATGCGGCGAAGAAGC  63 427
        coxB 3974242 .. 3974274 - -13.4  -3.22858   CCAACTACAGGAACA     GCAGCGG-GGCGCGC TTCA GCGCGCCTCCACCAC      GTCCTTGGGTTGGAC  73 8
        ctaD NONE
CXD94_RS19350 NONE
CXD94_RS19345 NONE
CXD94_RS19340 3971183 .. 3971200 - -12.7  -3.33696   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  71 57
CXD94_RS19330 NONE
CXD94_RS19325 NONE
CXD94_RS19320 NONE
CXD94_RS19315 NONE
CXD94_RS19310 3966771 .. 3966797 -  -8.7  -2.87132   TTGGGCGTCCACAGA         TATCGGCCCCC CATGC GGGGACAGATA         CCGTCTTGGCAGTCA  54 137
CXD94_RS19300 3965643 .. 3965658 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CXD94_RS19295 3964786 .. 3964815 -  -2.6  -3.31322   GCGAAGGTTCGATAA       GCGCGACGATTC CAGGGC GTGCCGGCGCGC        TACGGCTTGTCCGCC  44 25
        glmU NONE
CXD94_RS19285 3961892 .. 3961923 - -10.8  -3.04322   TGCAACCTCGCAATA      CGCGGCGTCAGCGGA CCA TCCGCCG-CACTGCG      GGCATTATAGAAGTA  62 87
CXD94_RS19280 NONE
CXD94_RS19275 3959293 .. 3959327 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS19255 3955708 .. 3955718 -  -8.2  -5.15634   CACTCTAGGAAAAAA                 GCGC GGC GCGC                 GAAAATAATTAAAAC  95 203
CXD94_RS19250 3954267 .. 3954298 -  -8.6  -2.56596   TGGGTGACGAAGGGA      TGCGAGGGCCG-CCG TGG CGGCCGGCCCTCATT      CGGAGGTGGCGGTGC  52 21
CXD94_RS19245 NONE
CXD94_RS19240 NONE
CXD94_RS19235 NONE
CXD94_RS19230 NONE
CXD94_RS19225 NONE
CXD94_RS19220 3947432 .. 3947446 - -11.4  -3.90112   TGGCGGCCAAGGAAA               CGCTGG CCA CCAGCG               ACCTCAACACCGAGC  77 391
CXD94_RS19210 NONE
CXD94_RS19205 NONE
CXD94_RS19200 3943645 .. 3943656 -  -2.2  -3.18389   GGAAGATGAAAATCA                CGAA ACAC CTCG                 TTCATGCAGGCCCGG  42 95
CXD94_RS19195 3942762 .. 3942807 - -14.5  -3.70902   CGCGCGAGACCGAAA GCCCGGGTTTCCGGCAGCGCG TCGC CACGCAGCTGGCCACCCAGGC CACCCAGGCCATCCA  88 96
CXD94_RS19185 NONE
CXD94_RS19180 NONE
CXD94_RS19175 NONE
CXD94_RS19170 3937492 .. 3937505 -  -5.2  -3.10611   TTTACCCGAAGAAAC               GGGC CAGCAC GCCC                TGCCGCGGATGTCGG  49 382
CXD94_RS19165 NONE
CXD94_RS19160 NONE
CXD94_RS19155 NONE
CXD94_RS19150 3933731 .. 3933741 -  -8.2  -2.70932   CTCTGTCTGCAATGA                 GGGG GCG CCCC                 GGGTTCAGCGCCCGT  52 30
CXD94_RS19145 3932490 .. 3932505 -    -6  -2.55606   CTATATAGGATGAAT              GGGGTG CCTG CCCCCC               TGGGGACAGATACCG  46 163
CXD94_RS19140 3931324 .. 3931340 - -10.8  -3.19602   CGGGCTACACCAAGA              CGCCGC CCTAC GCGGCG              GGCATCGCCCTGCAG  64 155
CXD94_RS19130 3929053 .. 3929065 -  -3.3  -3.60475   AAGTGTGATCCGAAA                GCGGA CCG CCCAC                TTTGGTTGGGTCGGT  49 498
        trmB NONE
         pip NONE
        thiS NONE
        lysM NONE
CXD94_RS19075 3921616 .. 3921629 -  -5.9  -2.87931   GCCAGGTGCGACAGA               CCGGC GCGG GCCAG                GACGCGGCTGACGGT  48 330
CXD94_RS19055 3917733 .. 3917752 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TTGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CXD94_RS19050 3916670 .. 3916684 -  -2.8  -3.01924   GATTCGCCCGCAAGA               TCCC ACCAATG GGGA               GTTGGGAACGCGTCT  42 101
CXD94_RS19045 3916251 .. 3916283 - -18.5  -5.81412   CGGAGGCAAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTACGGCTGCG 100 63
CXD94_RS19040 3914531 .. 3914559 -  -7.4  -3.53012   GCGCGCTGCTCGAAA       GCGAATCGGC-CC GGCT GGCGGCGATCCGC        GGCACGGACGCCGAC  60 434
CXD94_RS19030 3911753 .. 3911776 -   -21  -2.71364   GCAGCCCGGCAAGCA          GGCGCCCGCC GGCA GGCGGGCGCC           TGGCGGCGTCAGCGC 100 34
CXD94_RS19025 3911075 .. 3911091 - -15.1  -5.53288   TTTAATCGAAAAAAA              CCGGCGC CCG GCGCCGG              ACCATGACTGCGTTC 100 39
CXD94_RS19020 3910792 .. 3910829 - -16.9  -2.65174   AAAATAAGTAATCTA   CCCGGGAGCCTGTCCCC GCAT GGGGACTGGCTCCCGCC    AACTTCAGCCGTCAG  80 104
CXD94_RS18970 3899404 .. 3899430 -  -9.2  -2.52516   CGCGGCACGACGAAG         CCGCCGCCACGC TAG GCCAGGCGCCGG         GGGCGCAGCTGTATC  51 513
        uvrA 3889349 .. 3889383 -  -2.8  -3.01712   GGCCTGGCGGCAAGA    TAGGGGGG--CGGGCG GTTCG CGTCCGTGCCGCCCTA    GTCTAGCGCCGTTTG  42 28
CXD94_RS18920 3888490 .. 3888513 -  -8.9  -3.53012   GGCGGCTGTTCGAAA          TGGGCTGAGG GGCTG CCTC-GCCCA          TGCGGCCTACCCCAA  62 183
CXD94_RS18900 3882746 .. 3882771 -  -2.4  -3.70149   TCGACAGTATCGAAA         GCCAGGCGGAC GATTG GGCCGCA-GGC         CTGGATGTCGATATC  53 331
CXD94_RS18890 NONE
        lysA 3881136 .. 3881165 - -22.3  -3.53012   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 48
CXD94_RS18865 NONE
        hemB NONE
CXD94_RS18840 3870503 .. 3870533 - -15.3  -3.13164   CCCGTAAGCAGTCAA       GCGCGGTGGGCGC GCCAT GCGCCCGCCGCGA       TGTTTTCATGCATCG  78 453
CXD94_RS18740 3859671 .. 3859691 - -15.4  -4.72272   GCCGGCCATGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCCTGAGCCCGG 100 50
CXD94_RS18735 3858644 .. 3858666 - -17.8  -3.72576   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG  93 125
CXD94_RS18650 3846981 .. 3847002 - -15.1  -3.14132   TCTGTTCTTCACCAA           GGCCACGCC TTCG GGCGCGGCC            TAGCTGTGAACTGTC  76 25
CXD94_RS18625 3841398 .. 3841429 -  -2.2  -4.68103   CCAACTGGAACAAAA     GGC-CCGCCACGAC TTCGAG GACGC-GCGGCGCC      AGGCCGTGCAATCGG  76 357
CXD94_RS18585 3830822 .. 3830856 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS18560 3827119 .. 3827168 -  -7.9  -3.91084   GCAGCCTGAAGGAAA CCCGGCTGCCGC-TCACGCC-GCC GCCCG AGCAGGCATGACGCCGC-GCCAGG CCGTTCAGGTCAGCA  68 30
        ilvB 3824628 .. 3824667 -  -4.9  -3.76224   TGGCCAGCGACGAAA CCGCC-TTCATCACC-GGC GCCT GCCTGGAGGTGGATGGCGG  CCGCTGCGTGTAGGC  58 94
CXD94_RS18510 3813037 .. 3813090 -  -9.4  -3.25823   CTGGGGCCACAGCAA CAGGACGT-GGCGGCCGCGGTCGGCG ATTT CGCCCTGCGCCGC-GCCGACGGCCTG TGGGCCTACCAATTG  61 390
CXD94_RS18480 3804536 .. 3804563 -  -8.4  -3.25823   CCTGCCGCACATCAA        GACCGGCAA-GGC CGT GCCGCTGGCGGTC        ACCACCGCCGGCCGG  59 351
CXD94_RS18470 3802487 .. 3802508 -  -4.3  -3.05596   GACGCCGGGACGGAA           GTCCTGCAT CGCC ATGCCGGCC            CCGTCCTTACTTGCG  45 32
CXD94_RS18465 3802229 .. 3802253 - -17.1  -3.20991   TCGAAGTGAAGTGAA          TGACGCCGGGC GCG GCCCGGCGTCG          GGTCAGCCTTGCTCC  84 28
CXD94_RS18435 3793375 .. 3793419 -    -2  -3.17723   GTATTTCGAAGGCAA GCTCAAGCGCCGCACCGATGCC GAC GGCATCG-TGCGTTTCCAG-GC GGCGTAGCGGGCGCG  42 56
CXD94_RS18425 3791828 .. 3791853 - -13.5  -3.38522   GATGCAGTGCAAATA         TTACGTTTACG TAAA CGTAAACGTAA          AGTTGAGTCGGGTTT  75 91
CXD94_RS18375 3781854 .. 3781875 - -11.5  -3.57144   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG  72 95
        rpmH 3776222 .. 3776238 -  -2.1  -2.78384   TCCGCCTGGATTAGA              CGGCCAG ACG CTTGCGG              CCCTTGGCGCGGCGG  38 4
CXD94_RS18350 3775721 .. 3775765 -  -2.8  -4.12902   GAAGTACCGGTAAAA CCGGATCGGGGCGATAAGCAG TCTC CTGATCATCGCGCT-ATCCGT GTGAAGTGAGCATCT  59 10
        yidD NONE
        yidC 3773704 .. 3773723 - -16.4  -5.55664   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC 100 43
CXD94_RS18325 3771142 .. 3771187 - -14.8  -2.78384   CGGCGCCGCAGGACA CGGCCG-AGGTCGCCGGCCGCAA GGC CTGAGGCCGGC--CCTACGGCCG GGCCGTGTCGCTCTG  72 17
CXD94_RS18315 3768491 .. 3768517 -  -7.1  -2.82516   CCCTGTACGACCAGA         GCGCGCCGGCC GACGA GGCCGAGGCGT         TCCGGCGCAGCGGCT  50 68
CXD94_RS18305 3765684 .. 3765716 -  -3.3  -3.28791   ATGTGCGGCCCACAA     GTACGGCGGGATTG AGGCCG CCA-CCCGCCGCGC      CATCGTCCGTGCCGC  47 393
CXD94_RS18215 3756064 .. 3756079 -  -8.2  -3.09273   GCGCGCCAATAGATA              GGCCAC CACA GCGGCC               CCCACCAGGATCAGG  56 199
CXD94_RS18210 3755078 .. 3755102 -   -15   -4.2828   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG  95 52
CXD94_RS18185 3751474 .. 3751489 -    -6  -3.15579   CCAACGCCCCAGCAA              GCGGCG TGCC CGACGC               TCGCGGAAGATCCGC  51 71
CXD94_RS18180 NONE
CXD94_RS18175 3751020 .. 3751036 -  -3.5  -5.00616   TTGCGTTTGAAAAAA              TCGCCTG CGC CCGGCGC              GATGCCGGACAGCGT  81 127
CXD94_RS18170 3743749 .. 3743785 - -11.3  -3.09785   GCATACGCCAATATA    GCCGCAATGCCGGCCGC CGA GCGGCCGGCCCGGCCCC    CGGTCAATACGCCAC  64 29
CXD94_RS18165 3743048 .. 3743063 - -11.8  -5.10461   CGCACGCAAGAAAAA              CGGCCC GCAA GGGCCG               TCTCAAAACGTGGGC 100 118
CXD94_RS18160 NONE
CXD94_RS18155 NONE
CXD94_RS18150 NONE
CXD94_RS18145 NONE
CXD94_RS18140 NONE
CXD94_RS18135 3736934 .. 3736950 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD94_RS18115 NONE
CXD94_RS18110 3732993 .. 3733011 - -10.3  -3.07222   AGGAGCACCTGAAGA             TCCTCGC GGCCT GCGAGGA             AGGCAATGCCGCGCG  59 110
CXD94_RS18090 NONE
        rimO 3727604 .. 3727623 - -11.4  -3.28712   TTGGCTGCGCTACAA            GCGCCACG CCTT CATGGCGC             GCGGCTTGAGCGCCG  66 434
CXD94_RS18075 NONE
CXD94_RS18070 NONE
CXD94_RS18065 NONE
CXD94_RS18060 3724662 .. 3724682 - -11.8  -3.36492   GCTGGAATTGCAGAA            GGCCGGCG GCAAG CGCCAGCC            GGTGGACGTCTTCGT  66 82
CXD94_RS18030 NONE
        dprA NONE
CXD94_RS18020 3717808 .. 3717836 -  -4.3  -3.20723   TGTTCATGAATGGAA        CGGGCGATGCGGC GAG GCCGCGTAGCATG        AGGAGGGCGTATGGG  47 131
CXD94_RS18015 3717075 .. 3717111 -  -2.2  -4.28254   GCTCAAGAGCGAAAA   CCCCAACGT-GCGCCGCA TCC TG-GGCGTGACGCCGGGC   GCCGGCGCCAACCTG  65 237
CXD94_RS17995 3712528 .. 3712553 - -10.3  -3.35679   CGTCGTCACCGAGAA         CGGCGTGGCGC AGAT GCGCCAGGTCG          ACGGCGTGGCCGTGC  63 290
CXD94_RS17980 3710320 .. 3710354 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS17950 3706518 .. 3706532 -  -8.5  -3.14132   CCTGCGCTGGATCAA               CCGCC TGTGC GGCGG               CATGCTGGTCGTGCT  56 123
        rsmB NONE
CXD94_RS17935 NONE
CXD94_RS17930 NONE
CXD94_RS17925 NONE
        trkA NONE
CXD94_RS17915 3697956 .. 3697982 - -11.4  -2.70232   CTGAATAGTACACCA         CCGCGCGGGCAG CGG CCGCGCGCGCCG         CTATTTGCGCCAGAA  62 26
CXD94_RS17910 3696955 .. 3696997 -  -3.2  -3.14344   GACCCGCGCGAGGAA TTCCATGCAGCCTGGCATGC GCC GCACGCCACGCTGGTCGCCA CCATGCCGGACGACA  45 398
CXD94_RS17900 3695457 .. 3695492 -  -2.3  -3.54424   CGGGACGCGCCGAAA    CCCTTGCCATGCGGG ACTTTA CGCGCCCGGCCAGCG     ACCCGCGGCAGTCCG  48 167
CXD94_RS17895 NONE
CXD94_RS17890 3693287 .. 3693333 -  -8.6  -3.53224   CAGCGCGCGCGCAAA CGCCAGCAGGTCCTCGGCCTG CACATC CAGGCCATAGTCCAGCTG-CG GCCCCGACTGCGACA  62 262
CXD94_RS17880 NONE
CXD94_RS17875 3690775 .. 3690786 -  -7.2  -3.68351   GCGTCACCAGCGAAA                CGCC AGAC GGCG                 AGATCGCCGCATCCA  64 278
CXD94_RS17850 NONE
CXD94_RS17845 NONE
CXD94_RS17840 NONE
CXD94_RS17835 NONE
CXD94_RS17830 NONE
CXD94_RS17825 NONE
CXD94_RS17820 NONE
CXD94_RS17815 NONE
CXD94_RS17810 3676566 .. 3676585 - -13.6  -4.52589   TTCCCTTAGATAAAA            CGGGCGTT ACCA AACGCCCG             GCAGGTAACCACTAT 100 37
CXD94_RS17805 3674893 .. 3674907 - -11.4  -3.09635   AGCCTGAGCATCGAA               GTGGCC TAC GGCCAC               GCCTGGCGGGCGCCG  62 125
CXD94_RS17795 NONE
CXD94_RS17790 3672282 .. 3672303 - -10.1  -3.05384   GCTTTCCGCAGGTAA           TCACCGCCA TCAT CGGCGGCGA            CGTGCACGCCGGTTT  59 423
CXD94_RS17760 NONE
CXD94_RS17755 NONE
CXD94_RS17750 NONE
CXD94_RS17745 3664325 .. 3664359 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS17730 3662390 .. 3662426 - -23.8  -2.71693   GAGGAAGGAAAGTCA    GCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGG    GTGGGGGGTTTACAT 100 35
CXD94_RS17715 NONE
CXD94_RS17710 3657698 .. 3657729 -   -15  -2.60075   GCGGGTCGAATGAAG      GCAGCCGCGCCGCC CGAG GGCGGCGCGTTCGC       ATGAGGACGAGGCCC  71 45
CXD94_RS17625 NONE
CXD94_RS17620 NONE
CXD94_RS17615 NONE
CXD94_RS17610 NONE
CXD94_RS17605 NONE
CXD94_RS17600 NONE
CXD94_RS17595 NONE
CXD94_RS17590 NONE
CXD94_RS17585 3630313 .. 3630341 -  -3.7  -3.31726   GGTCGCCACAGAATA       CCTGCGCGCTGG TCCAGG CCGGCGC-CGGG        GTGGCGCTGGTGGAC  47 199
CXD94_RS17575 3628429 .. 3628439 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS17570 3627251 .. 3627263 -  -6.9  -3.29144   CGACCTGCTGCACAA                GGGCA TCG CGCCC                AAGGCCCTGGTGTTC  52 187
CXD94_RS17545 3623676 .. 3623689 -  -4.5  -3.53733   CGGAGGTGATAAACA               CCAGT GATC ACCGG                GCGCTGTTCAGGCCT  52 33
CXD94_RS17540 3621459 .. 3621474 -  -6.8  -3.03124   GCTGACGGCGGAATA              CCTGCG CACG CGCAAG               CAGTTCGGCGTACCG  48 408
CXD94_RS17500 3612993 .. 3613051 -  -7.5  -2.70932   CCTGGCCGGCAAGCA CCAGC-C-C-ATGC-GCCTGGGCATGGCG TGGAT CCCCGTGCCCAGGCCGCGTCGCGTGCTGG AGGCCTTCATGCAGC  49 189
CXD94_RS17480 3607800 .. 3607810 -  -2.4  -3.17075   TGGTGGGCAACGCAA                 TCGG GCG CCGT                 GCATGGCCGTCCCGC  42 42
CXD94_RS17475 3606752 .. 3606765 -  -3.7  -2.56596   GTGTCGATCAATCGA               CGCTG ATGT CGGCG                ACGTTGGCGATGGTT  40 4
CXD94_RS17470 3605518 .. 3605530 -  -4.7  -4.20696   GGAGTAAGGGGAAAA                GCCGG CGG CCGGT                CAGGGAGGCTGTCCC  66 202
CXD94_RS17460 3602783 .. 3602797 -  -2.1  -3.17075   TCTGTGGGAACTCAA              CGAGGC CTTT GCCT-G               CCAGGTGCTTTATTG  43 267
CXD94_RS17445 NONE
CXD94_RS17440 NONE
CXD94_RS17435 NONE
CXD94_RS17430 NONE
CXD94_RS17425 NONE
CXD94_RS17420 3590250 .. 3590260 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS17410 3589228 .. 3589267 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD94_RS17405 3588090 .. 3588121 - -12.2  -3.03338   AGAAGTCCGCGAACA      GCAGGAGGAGCAGG CGCG CCTGGCCCGCCTGC       GCACCTTCGAACTGA  67 101
CXD94_RS17395 3586146 .. 3586172 - -11.5  -3.58231   AAAGAATGGACACAA         GCGGACGCCCG GCGCA CGAACGCCCGC         CGCGAAGGCGGGGTC  72 53
CXD94_RS17390 3585015 .. 3585025 -  -2.4  -3.14344   CAGGTCCTTGAGCAA                 GGTC ATC GCCC                 GCGCATCACAGATCG  42 31
        prmC NONE
        grxD NONE
CXD94_RS17375 3583226 .. 3583252 - -22.4  -3.64703   GCGGCCGTACGCAAA         GAAGCCTGCCCC ATC GGGGCAGGCTTC         AGGTACAGGCAGGCG 100 53
CXD94_RS17370 NONE
CXD94_RS17365 NONE
CXD94_RS17360 NONE
CXD94_RS17355 3577263 .. 3577278 -  -3.2  -3.17685   CAAGGACACATGGAA              GGTGTT AGTG AACTCC               ATCGACAAACTCCCC  44 14
CXD94_RS17350 3576708 .. 3576756 -  -7.9  -3.14132   CTGCGCCTGCAGCAA CACAGCCTGCGCATCCGGGCTG ACCACG CTGCCCGCGGGCGC-GGCCGCG GCTACAGGCGCCGCG  54 130
CXD94_RS17345 3576444 .. 3576468 -  -7.8  -2.91582   CACTGCACGGACAGA         CGCCAGTTCCC ATGC GGGA-CAGGCG          CCTCGCGTATCGGAA  52 61
CXD94_RS17320 3571261 .. 3571304 -  -9.5  -3.44222   CAAAGCAGCAAGTAA CGCCACGG-TGCCTGTCCCC CTTGC GGGGACTGGCACCCACACCG AACCCCGCCCTACCG  63 35
CXD94_RS17275 3563813 .. 3563843 -  -8.2  -3.53012   GCTCGGCGCGGGAAA      GGCGCCTGCCAGC GCCATG GC-GGCCAGCGCC       GGGATCAGGGATAAG  62 194
CXD94_RS17265 3560747 .. 3560763 - -10.8  -2.73875   GGTTCTGGAACACCA              CGCGCG CCACC CGCGCG              CCGGTCAGGACCTTC  60 372
CXD94_RS17255 3558357 .. 3558374 -  -8.3  -3.90112   GGTTTTTCAAGGAAA             GGCCGCC TGGC GGCGGCG              CGGCCCTGCCCTGTC  70 41
CXD94_RS17250 NONE
CXD94_RS17245 NONE
        aspS 3555331 .. 3555363 -  -9.8  -3.64703   GGCGCGTTATCGAAA     CGGGCGAAGCCACGC CATT GCCCGGCCT-GCCCG      ATTCCGGCCGCTGGC  70 81
CXD94_RS17235 NONE
        clsB 3553146 .. 3553158 -  -6.2  -3.14132   TGGTTCCTGGACGAA                GCGG TGACG CCGC                GCATCCTGGCCGGCG  50 111
CXD94_RS17205 3548151 .. 3548194 -  -8.1  -3.18199   TAAGGCGCAAGGCAA GGCGCGGACAGCGTCCGCCGGC GAG GCCGGCGGACGCCG-C-G-GTT TACTGCAGCGGTTCG  54 25
CXD94_RS17200 3546762 .. 3546786 - -10.7  -2.71011   ACGCCGGCTGAAGCA         CGGCGG-CGC GGGCTG GCGGCCGCCG          CGCTTCAGGCGGCGT  60 30
CXD94_RS17190 3544704 .. 3544734 - -10.3  -3.43446   CGATACCGAACAATA       GACCAGGCGCGGG TTGCG CGCGCGCATGGCC       TGCTGCCCCAGCCCC  65 374
CXD94_RS17180 3542977 .. 3542995 -  -8.1  -3.47227   CGGCAAGGACGACAA            GGCGCGCG GCAT CG-GCGCC             GGCCTGTCCGACGCG  58 209
CXD94_RS17120 NONE
CXD94_RS17115 3530261 .. 3530288 -  -7.6  -3.22884   GCACGAAGGCATCAA        GTCGCTGCGCGAG AAG CGCGCGCCG-GAC        TTCCGGTAAGGGGGC  56 114
CXD94_RS17105 NONE
CXD94_RS17100 3528006 .. 3528037 - -13.1  -4.20516   GGGGGACGGAAGAAA      CGTCGCGTCT-GCC AGACA GGCCAGACGCAACG      CGGCGGCGCCGCGAG  91 149
CXD94_RS17090 3525122 .. 3525153 - -17.2  -3.53012   TGGTGGTCTTCGAAA      GACCGGTCCGGCCG TCGC CGGCCCGGCCGGTC       AGATAGGTTGGGCCA  89 24
CXD94_RS17085 NONE
CXD94_RS17080 NONE
CXD94_RS17075 NONE
CXD94_RS17070 NONE
CXD94_RS17065 3519348 .. 3519375 - -21.4  -3.62597   CGGAGGGGGGAACAA        GGTGCCTGTCCC CACG GGGACAGGCACC         CACGCCCTTGGTGCA 100 56
CXD94_RS16985 3502205 .. 3502229 -    -7  -3.01791   ATCGCCGGCCGAACA          GGTGGCGGCG ATGGA CGCGGCCAGC          TACTTCAACCTGTTC  51 234
CXD94_RS16970 NONE
        folB NONE
        ttcA 3496104 .. 3496114 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS16950 3494955 .. 3494974 -  -3.4  -3.30124   GCGCACGCTGGACAA            CGTGCTGC TTAC GCCGCACC             TGGGTTATGTGAACG  47 151
CXD94_RS16920 NONE
CXD94_RS16915 3488617 .. 3488642 -  -6.7   -4.7497   GGCATGCAGCAAAAA         GCCCGG-TCCAG TTA CGGGTTCCGGGC         TTGGCGCTGCACTTC  84 212
CXD94_RS16910 NONE
CXD94_RS16905 NONE
        trpD NONE
        trpC 3484529 .. 3484561 - -12.6   -3.8186   CATCGCAAGGAAGAA     GCGGGCGGCGCGCCG GCGC CGGCGCG-CGGCAGC      GGCCGCTGAGGCCGG  81 55
CXD94_RS16880 3480666 .. 3480698 -    -9  -3.04322   GGCAACTGGCCAAGA      TGGCCATGCGCGCC GAGCA GGCGCGCAGCGTCA      TGTTCCAGACCGCCC  57 46
CXD94_RS16870 3478465 .. 3478506 - -10.1  -2.78463   AGCGCGTGGACCACA CCATGACGGCCGCCGACCTG ACC CAGGTGGGCAGC-GACATCG AATCGCTGGTGCTGT  56 113
CXD94_RS16835 3472216 .. 3472251 -   -19  -3.14132   CTCTTCCCGCAGGAA    TCCGGGTGCCTGTCCC AGCG GGGACAGGCACCCCGT     CATACGCCAGCACGC  90 76
CXD94_RS16820 NONE
CXD94_RS16815 3467788 .. 3467806 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 202
CXD94_RS16790 3458523 .. 3458542 - -12.8  -5.60993   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTACCTGTAA 100 51
CXD94_RS16780 NONE
CXD94_RS16775 3454662 .. 3454718 - -16.4  -2.80398   GAATGAATGCAAGCA TGGCAACTCGATACGGGGTGCGGCGCC GCCA GGCGCCGCACCCGGGA-CGGGACGCCG GCGCGCAACGTCCCT  77 49
CXD94_RS16770 3453259 .. 3453308 -  -6.4  -3.73775   CCGACGCCGACGAAA CCGACG-ACGCCG-CGCCGC ATGTCCAGATGG GCGGCGCCGGCGCGCGCCTG CTGGGCGGGCGCGGC  59 171
CXD94_RS16760 3451866 .. 3451921 -  -2.5  -4.45175   CAGGAAAAAAGGAAA GGGAGATGTCGCGCAGGATC-TGCCGC TTGG GCGGCACGATCTTGC-CGACACGGTTC ATCGTGTAGACGTAT  67 143
CXD94_RS16745 3449401 .. 3449416 - -11.8   -4.7497   GGCAGCCACGAAAAA              CCCGGC CGAA GCCGGG               TTTCTCGTTGAGGCG 100 66
CXD94_RS16740 3448029 .. 3448067 - -20.3  -3.25113   CCGCAAAACTGAATA   CTCGGGTGCCTGTCCCC GCACG GGGGACAGGCACCCGCT   GAATCTTGGTCCCCG 100 68
CXD94_RS16715 3442241 .. 3442268 -  -9.2  -2.61582   GACCCCACCCAGAAC        CCGAAGATCCAGC GCG GCTTGATCT-CGG        TGCGGGCGCGGATAC  54 390
CXD94_RS16690 3436961 .. 3436972 -  -7.2  -3.95456   AAACGGAACAGGAAA                GGGC CGCG GCCC                 CGGGAACTGGCTAGC  66 36
CXD94_RS16685 3435597 .. 3435639 - -14.1  -2.78384   CTGGTGGCCATGATA GGCGC-GGCCAAGGCCGACG GCCA CATCGGCCCCGACGAGCGCC AGTTGCTCGAAACCG  67 302
CXD94_RS16675 3434494 .. 3434512 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 214
CXD94_RS16650 3429438 .. 3429451 -  -2.3  -3.02166   GCCGGAATGAAAGTA               CGGCA TTAT CACCG                GCCCGGATCGTCGGC  41 20
CXD94_RS16645 3428736 .. 3428770 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS16625 NONE
CXD94_RS16620 3425841 .. 3425860 -  -5.6   -3.1552   CGGCATCCACGAATA            CGCCAAGC TGGT GCATGACG             GCTGGGTCGATCCGC  49 121
CXD94_RS16595 NONE
CXD94_RS16590 3418549 .. 3418561 -  -9.1  -3.02511   GCGAGGCGTTCAATA                TCGCC AAC GGCGA                CGTGGTGCTGTGGCA  55 368
CXD94_RS16555 NONE
CXD94_RS16550 NONE
CXD94_RS16545 NONE
CXD94_RS16540 3409917 .. 3409970 -  -4.3  -2.94144   CCGGCAGGTAAAGGA CGATGA-CGGCCAGCGGCAGGAGCGC GGC GCGGCGCAGCGGCAGGCGGATCATCA GTGCACCCCCCGCGC  44 23
CXD94_RS16535 NONE
CXD94_RS16530 NONE
CXD94_RS16525 NONE
CXD94_RS16520 NONE
CXD94_RS16515 3404602 .. 3404638 -  -7.9  -3.85698   GGCGCCGCTGACAAA   GGCGCTGCG-GCCGGC CAGCGC GTCGGCGCGCAGCACG    CGCAAGTCATCGATG  66 110
CXD94_RS16505 3402815 .. 3402829 -  -3.4  -3.78934   GCGGTTGGAGAACAA               CCGCGA AAG CCGGGG               ATCGTTGCGGGTATC  56 202
CXD94_RS16495 NONE
CXD94_RS16490 NONE
CXD94_RS16465 NONE
CXD94_RS16460 3392216 .. 3392243 - -11.4  -4.50976   GTCCAGATGAGAAAA        GCCCGCA-AAACC TGA AGTTTATGCGGGC        TTTCCGGGGCGCTAC 100 63
CXD94_RS16455 3391672 .. 3391691 -    -7  -3.08679   CGGCTCGATGCAATA            GCGCCCGC CTTC GCTGACGC             GTTCTTCAGCTACGG  52 35
CXD94_RS16440 3390605 .. 3390615 -  -3.2  -3.41602   TGCATGGTATCACAA                 TACC CAG GGCA                 TTCATTCCATCACCC  48 27
CXD94_RS16435 NONE
CXD94_RS16430 3389158 .. 3389191 -  -4.6  -4.36411   CATGAATGACGAAAA    TCC-CGACCCGG-TGC TCAG ACAACCGGGTTGTGGA     CGGTAATCAGCTTGG  69 6
CXD94_RS16425 NONE
CXD94_RS16420 NONE
        ureC NONE
        ureE 3385789 .. 3385816 -  -6.8   -3.1372   CAGGCCCTACGAATA        GCTGAAGCCGCC GATC GGCAGCGCCGGC         GAAGACAGATGCAAC  52 62
CXD94_RS16405 NONE
        ureG 3384385 .. 3384425 -  -8.7  -3.58726   GTCCTCTATATATAA  CGGCAGGCGCGCCGGCCCG CAC CGAGCAAGCGCGTGCGCGG  GAATCTTCGGCAAGC  62 99
CXD94_RS16355 3371383 .. 3371400 -  -9.1  -3.16564   CGCCTATTCGACCAA             CCGCGTC ATCG GACGCGA              CAACGCCCTGCCCTG  56 422
CXD94_RS16335 3368589 .. 3368612 - -16.8  -6.06723   GCGGCGAAAAAAAAA          GCCCGAGATC TTGC GATCTCGGGC           TAAATCCACCAAAGG 100 465
CXD94_RS16330 3367133 .. 3367143 -  -6.8   -3.1506   AAATCTCCCTATCAA                 CCGT GTG ACGG                 CTACGGAATTGTATG  52 102
        tviB NONE
        tviC 3364807 .. 3364819 -  -4.8  -3.51232   TGGCTTTCAAATCAA                CGCA GGAAT TGCG                TGTACCAGGGCATGG  52 9
CXD94_RS16315 NONE
CXD94_RS16310 NONE
        asnB NONE
CXD94_RS16300 NONE
CXD94_RS16295 NONE
CXD94_RS16290 3356599 .. 3356626 -    -9  -2.60571   AAGCGCTCAAGGAAG        CGCGGCTGGTCG AGTC CGACCCGCAGCA         GGCCGAGATCCTGGC  51 325
CXD94_RS16275 NONE
CXD94_RS16270 NONE
CXD94_RS16265 3350827 .. 3350852 -  -3.1  -3.54543   ATCCATTGCCGGAAA         CAGGCCGTGCA CTCA TGCGCCACCCG          CCGGCAGCGCCAGCC  49 12
CXD94_RS16260 3349432 .. 3349458 -  -5.9  -5.40072   CTCGTTGCAAAAAAA        GACGCGCAAGCA TACC TG-TTGGGCGTC         AAATCGATGTCAAAT  95 87
CXD94_RS16255 3347200 .. 3347219 -  -7.1  -3.16564   GCTGGAGCTGACCAA            CG-GCGGC AAGCA GCCGCTCG            ACCTGCCCTGGGGCG  53 285
CXD94_RS16240 3343410 .. 3343436 - -10.8  -3.18582   GACCTCAGCGACGAA         CAGAGCCGCG AGCTGAA CGCGGCGCTG         ATCCTGCTGCTGGCC  64 131
CXD94_RS16215 NONE
        lolB 3337141 .. 3337157 -  -6.5  -2.52896   TCACGGCGGAAGCGA              GGGGC TGGGGAT GCCCC              TATTCTAGACCGCCG  45 46
CXD94_RS16205 NONE
CXD94_RS16200 3336092 .. 3336134 -  -4.2  -5.79595   TCGTAAAACAAAAAA GCTGCTGAACTGGAGCCAGT GTCTG ACGGGCG-C-GTTCAACAGC TTTTTTATGTATTGG 100 43
CXD94_RS16195 3334991 .. 3335015 - -12.8  -4.07885   GATCGCCGGTTAAAA          CACGCGGCGC GACAT GCGCTGCGTG          GTTTTTGCGCGCCGC  83 81
CXD94_RS16190 3334242 .. 3334280 - -24.8  -2.91695   CGTATTTGTAAAGTA   CAAAACCCTGCGCATGCA AAT CGCATGCGCAGGGTTTCG   GGGACGTCGGGCACG 100 79
CXD94_RS16185 NONE
CXD94_RS16180 NONE
        ychF 3331595 .. 3331613 -  -6.7  -3.05816   GTATTGTTTATGCAA             CCCATTG ATTTA CAACGGG             CCAATCTGTCCACCA  51 78
CXD94_RS16170 3330190 .. 3330217 - -16.4   -3.4285   GCACTCAAGGGACAA        CGGCCCTATCCT GAAA AGGATAAGGCCG         TTCTACCCACTTCGC  85 67
CXD94_RS16165 NONE
CXD94_RS16160 NONE
CXD94_RS16155 NONE
CXD94_RS16150 NONE
CXD94_RS16145 3321429 .. 3321442 -  -3.1  -2.79183   GCTATCTGTATCATA               CG-GAC TCC GTCTCG               CCGAAAAGGTCACCA  40 7
CXD94_RS16140 NONE
CXD94_RS16135 NONE
CXD94_RS16130 3319553 .. 3319564 -  -5.8  -2.89475   GATCGACATAGCAGA                GCAG CAGA CTGC                 CAGCGGTCTTATGGA  46 240
CXD94_RS16095 3309127 .. 3309154 - -10.5  -3.08679   CGGGGCCAGGCAATA        GGCGAGCGCTCC CGGCC GGCGCGC-CGCC        GGCGCCGCGCTTGGC  62 49
CXD94_RS16085 3306547 .. 3306574 - -13.4  -3.34398   TGCCGCCTGGAAAGA        CCTGCTGCTGCC GCGC GGCAGCAGCCGA         TATGAAGAACTGCGC  74 237
CXD94_RS16055 3301361 .. 3301379 -  -4.6  -2.78596   GATGTTCGGATTATA             CCTACA TGTTTTC TGTAGG             TATATATATTTTCTG  43 85
CXD94_RS16050 NONE
CXD94_RS16045 NONE
CXD94_RS16040 3297646 .. 3297664 -    -3  -3.01001   TAGCGGGAAATGACA             GTCATGGA GTC TCCTTGTC             GTTGTATGCGAGGGG  42 163
CXD94_RS16035 3296590 .. 3296630 -  -4.7   -3.2794   GTCCATGGACACCAA TGG--GCCGGGCTGCGGGGC TTGC GGCCCGCA-CCCGGTAGCCA CCCGCAAGCCTAGTT  49 35
        modA 3295413 .. 3295457 -  -9.2  -2.64616   TGCCCAGGTAGACGA GGTAGGCGCCGCCGATCC ATTTCAGCA GGATCAGCGCCGGCGACC AGGCCTTGAGCAGGG  54 302
CXD94_RS16020 NONE
CXD94_RS16015 NONE
CXD94_RS16010 3293315 .. 3293343 - -11.6  -3.30771   GTACAGGGCCGAGAA        CGGGCCGCGCAG CACTT CCACGCGGCCGG        CCGAGCCGATGTCGA  68 419
CXD94_RS16000 3291006 .. 3291017 -  -7.2  -5.30616   CGAGGGAAATAAAAA                CGCC GGAA GGCG                 GTGGTTCATGGACTG  95 113
CXD94_RS15995 NONE
CXD94_RS15990 3290434 .. 3290460 - -13.7  -3.09831   CGTACCGCAAAAGGA        CG-CGGCCGCCC CGGG GGGCGGCCGTCA         TGGGGCGAGACCGAC  73 51
CXD94_RS15980 3288819 .. 3288835 -  -5.7  -4.36914   GTCGCGCCCACAAAA              GCAGGCC CGC GCCCCGC              CCGCTTAGCGGACCT  72 30
        modA 3287929 .. 3287939 -  -2.4  -2.61264   CTGGTCAGCGACAAG                 GGCG GGA CTCC                 TGCAAGGGGTTACAG  38 35
        modB NONE
        modC 3285734 .. 3285757 -  -5.2  -3.72576   TGCGGCTTTACGAAA          TGCGGCGCAGC TAC GCCGGGCC-CA          AGCCGCAGGGCAGGG  58 394
CXD94_RS15950 3282234 .. 3282255 -  -6.5  -2.87132   TCCTTGCCGCATATA           GCGGCGCAT ATGC ATGCGCCAG            GCCGAACAAGGGAAA  48 257
CXD94_RS15945 3280465 .. 3280515 -  -5.1  -2.50034   CATGAAGGGAAAACG CCCGGTGGAGCGCAGCGGCGCGGG CAGG CCCGCGCCGC-ATGGTCCGGTTGG GTCAGGCCTTAGCCG  44 34
CXD94_RS15940 3279185 .. 3279202 -  -9.1  -3.14132   TCCGGCGCGCATCAA             GCC-GGCG CTG CGCCAGGC             GCGCTTGCAGGCGCT  56 68
CXD94_RS15925 3275287 .. 3275311 -  -8.4   -4.1899   CGACCCTAGGGAAAA          CCCCGGGAGG ACGGG CCGCCCGGGT          TGGCGTGTTCAGCGC  76 34
CXD94_RS15920 NONE
CXD94_RS15915 3272608 .. 3272623 - -11.8  -5.18357   GAAGGCATGAAAAAA              GGCGGC CGCG GCCGCC               TTTTCCGGATGGACA 100 50
CXD94_RS15910 3271345 .. 3271379 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 259
CXD94_RS15870 NONE
CXD94_RS15865 3262854 .. 3262872 -  -2.2  -3.57263   ATTCCGACGCGGAAA             GCCCCTGG ACG CCCGGGAT             GGCCGCCGTTTCAGT  48 36
CXD94_RS15860 NONE
CXD94_RS15855 NONE
        xerC 3259769 .. 3259804 -  -8.9  -2.80816   GCCTGATCGAGTACA    CGCAGCGCGACGCCGA GTTCA CCGGCGTCGAGG-GCG    AAGTCCGGCACCGCT  52 436
CXD94_RS15815 3252968 .. 3252994 -  -3.8  -3.93556   ATCGATGCAACGAAA         GAAGATGG GGGCGGAATTT CCATCTTC         AAGAGGGGACGGAGC  59 76
CXD94_RS15810 3251534 .. 3251550 - -10.1  -2.57795   TCCACTATGAATCGA              TCCGGGC GCG GCCCGAA              TATTCGCGCCTGGCT  57 128
        dksA 3250972 .. 3250995 - -13.2  -5.07652   GGTCCGAAAACAAAA          GGGCTATGCC GTGG AGCATAGCCC           TGGTAATGCGTTCGG 100 76
        hslV NONE
        hslU 3248996 .. 3249021 - -11.9  -3.81027   TCCAAGTAAGGGAAA         GGCCGCGCTACA GCA CGTAGCG-GGCC         AGGTCCTGGCTGCCG  79 7
CXD94_RS15780 3247650 .. 3247660 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD94_RS15775 3246628 .. 3246667 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAC CTAG GTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD94_RS15770 3245241 .. 3245258 - -11.3  -2.56596   GCGCGCATCAAGCGA             CAGCGCA TCGA TGCGCTG              CCTGGCCAGGGCCAA  59 364
CXD94_RS15730 NONE
CXD94_RS15725 NONE
        zapA 3237013 .. 3237027 -  -2.8  -2.95102   ACGGCAGGGACAAAC               CATGAA TAC TGCATG               AATACTGCGCGCGAG  42 55
        ssrS 3236789 .. 3236823 - -12.3  -3.05993   GGAGGGAGAGAGACA    TCCGAAGGCAGGCCTGC GAT ACAGGCCTGCCT--GGA    TAGATGCCCCGCCTG  67 27
        ilvD NONE
CXD94_RS15690 NONE
        msrA 3230994 .. 3231025 - -10.8  -3.69256   AGGCACCGAAGAGAA      GGGGCAGATCCAGG AATA CCTGGACCTGTACC       GCGGCGAAGGCATCC  74 458
CXD94_RS15675 3229371 .. 3229385 -  -4.9  -3.56643   CGGAGATCCTGCAAA               CCGCA TGATT CGCGG               TTCCGGCTTCGTCGC  52 289
CXD94_RS15670 NONE
CXD94_RS15665 NONE
CXD94_RS15660 3226888 .. 3226926 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD94_RS15655 3223653 .. 3223663 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 3223444 .. 3223478 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD94_RS15645 3222481 .. 3222501 -   -14  -4.54727   GCCTGCAAACGAAAA            CGGCTGGC ACGAA GCCAGCCG            TTGCGAGCGGAACCG 100 56
CXD94_RS15635 NONE
CXD94_RS15630 3219191 .. 3219245 -  -9.9  -3.56862   AGAAACCCGCCGAAA CCGCCAAGCC-CGCCGCGGCGCGCC CCAAGCC GGTGCG-CGCGGCACGGCTGAGCGC CTGGGATCTGCGCGA  67 285
        rnpB 3217097 .. 3217117 - -19.7  -2.52464   GGGCGCCGTAAGCCA            GCCGGCCGG ATT CCGGCCGGC            TGTCATGAAAATGCA  93 41
        mraZ NONE
        rsmH NONE
        ftsL 3215035 .. 3215056 -  -6.5  -4.16016   GGATTGTCGAAGAAA           GGCACCC-GC CTC ACTGGGCGCC           TCCGGCGGGCTGGTT  66 14
CXD94_RS15600 NONE
        murF NONE
CXD94_RS15590 NONE
CXD94_RS15585 NONE
        ftsW NONE
        murG NONE
CXD94_RS15570 NONE
CXD94_RS15565 3203175 .. 3203187 -  -3.3  -2.87132   GCGTCGTTCCACACA                GAGCG TCC CGTTC                AATCTTGTCGCGCCG  41 24
CXD94_RS15560 NONE
        ftsA 3201008 .. 3201019 -  -3.6  -3.55622   GTGAATCGCCTCAAA                GCCG AAGC CGAC                 CGTGGTCCGCAACGG  51 127
        ftsZ 3199552 .. 3199563 -    -3  -3.63968   TGCGAAAGCCGGAAA                TCTA CCAA TAGA                 CACCGGCATAACCGG  53 210
CXD94_RS15545 3198541 .. 3198569 - -14.6  -4.57073   CATCCCCGCCAAAAA        GCCTATGGCCGC TCAGC GCGGCCATAGGA        CGAAAACCGATATCG 100 52
CXD94_RS15535 3196885 .. 3196910 -  -5.4   -3.5394   AAACCCGCCGGGAAA         CGATCCAGTT TAACGC ACCTGGACCG          CAACGGCCTGCCGTG  54 77
        secA NONE
CXD94_RS15525 3193162 .. 3193175 -  -5.9  -4.19704   TAAGGTCAGTGAAAA               CGGCC TGCC GGCCA                TCCATGGATCACGCA  70 161
CXD94_RS15520 3191768 .. 3191799 -  -8.6  -2.82635   ATCCCGATCACTACA      GCCG-GCACGTCGCC TAC GCCGACCCGCACGGC      AGCTTCACCATTGCC  53 368
CXD94_RS15510 3190644 .. 3190666 -  -4.8  -2.57132   GCCCTTTTCGATAAG           GGGCGC ATTATGCCGCA GCGCCC           GCGCCGCGCGTGCGC  42 10
CXD94_RS15505 NONE
CXD94_RS15500 3188777 .. 3188808 -  -4.3  -2.62396   TACCTTGCGAGATGA      CGGGCCTGGCATG CCCCGC CAGGCAAAACCCG       TTCACGGCGCACGCC  42 79
CXD94_RS15495 3187866 .. 3187884 -  -6.7  -4.37092   ATGGTTTCCAGAAAA            TCGGCCGC ATCG GCG-CCGA             TACCCGCCTGGGCAT  72 212
CXD94_RS15455 3180115 .. 3180128 -  -5.9  -3.20991   TCCAACCGAATTCAA               GCCGA CAGG CCGGC                CACGCTGCGATCCAG  51 8
        aroQ NONE
CXD94_RS15445 NONE
        accC 3177256 .. 3177306 -  -8.8  -2.55668   GAGTTCGATATGAAT CGCGTCG--CGCGCGGCGTCGGGC ACCAG GCCCGGCACGGCGGGGTCGTCGCG GTGCCAGCTGGGCAC  52 422
CXD94_RS15430 NONE
CXD94_RS15425 NONE
CXD94_RS15420 3173970 .. 3173988 - -13.1  -5.40072   GCCGCCGCAAAAAAA             CGCCCGC ATGAA GCGGGCG             TCTTGCCGGAAGCAG 100 48
CXD94_RS15415 3173435 .. 3173472 -  -4.8  -2.78384   CGGCGCCCCAGTACA  GGCC-CAGCGAC-AGCGC GACG GCGCTTGCCATCGCGGCC   AGGTGGGACAGCAGG  43 44
CXD94_RS15410 NONE
CXD94_RS15405 NONE
CXD94_RS15400 3171062 .. 3171077 -    -6  -2.56838   TAGATCGAAATACAT              GCCGCG CACT CCCGGC               GGATCAGATAGGACT  46 29
CXD94_RS15395 3169602 .. 3169614 - -10.5  -3.53091   ATTCGGCGTCTGAAA                CGGCG CTA CGCCG                CCGCCGGAATCGCTG  67 18
CXD94_RS15365 3159993 .. 3160008 -  -3.3  -3.53012   TGTTTTCGCCGCAAA              CGAAA TATTTG TTTCG               CATTATAGGGATTAC  49 155
CXD94_RS15360 3159339 .. 3159353 -  -5.6   -4.6951   ACCACGCAAAACAAA               CACGAC AGC GCCGCG               TGCCGGACTGCCGAC  77 185
CXD94_RS15355 3158728 .. 3158783 -  -3.3  -3.40522   ACTTTCGGACGACAA CGACATGGCGGGTAGCGGCGGC-GACGT GGG AAGTCCGCCACCT-TACCCGA-ATGGCG CGCCGCTGGCGACAA  48 44
CXD94_RS15350 3157266 .. 3157288 - -11.2  -3.01712   GTTCTGCGGCGAATA           CCAGCCCGCC CCC GCCGAGCTGG           CGGCCCAGCACCTGA  62 283
CXD94_RS15340 3153341 .. 3153375 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS15320 3149917 .. 3149927 -  -2.4  -3.78934   TGTTGGTCACAATAA                 GGCG GAT CGCA                 GAGGATCGCGAAAGA  54 126
        dbpA 3148529 .. 3148543 -  -4.2  -3.28712   CCGCCGCGCTCAGAA               CTCTTC CAG GAAGCG               CATGCGGAACCGCCG  47 5
CXD94_RS15310 3147503 .. 3147532 -   -12  -3.16564   CGTGCAGCCCATCAA       CCGGCTGTGCGC CGCGGT GCGCGCCGCCGG        CGGCAGCGTGGTCTG  68 521
        pmbA 3141691 .. 3141716 - -19.1  -3.02096   GCCATGAACGAGACA         GTGCCTGTCCC CACG GGGACAGGCAC          CCTGCCGGCGCCGGC  90 51
CXD94_RS15270 3140249 .. 3140283 - -21.5  -3.53012   GGCGTTGCGCCCAAA    CAG-CAGGGGCCGCCC CGAA GGGCGGCCCCTGGCCG     GACCGAAACGGCGGC 100 45
CXD94_RS15265 NONE
CXD94_RS15260 3139141 .. 3139170 - -20.9  -3.28791   ACCGGGGCGCCATAA       GCAAAAAGGCCGC TTTC GCGGCCTTTTTGC        GGGACATTAGCGCTT 100 32
CXD94_RS15255 NONE
CXD94_RS15250 3137118 .. 3137137 -  -4.2  -2.80074   GCCCGGATAAGATCA            CTATAGCG CAGC CGCGACAG             GACTCAAAATTCCAG  41 29
        erpA 3136629 .. 3136654 - -18.3  -4.54727   GCGCCCAAACGAAAA         GGCCCTCCGGC GCAT GCCGAAGGGCC          TCGATCGCGGACCGG 100 53
CXD94_RS15225 3131512 .. 3131522 -  -4.6  -3.30124   TGGGACCCTCGATAA                 GAGG CTA CCCC                 ACCAACTTAACACGC  49 19
CXD94_RS15220 3130776 .. 3130797 -  -2.9  -4.62069   CGTCTACCGCAAAAA           TGCCTCAAG TCGG CATGAGCCA            GGCTCAAGCAAGCCC  71 52
CXD94_RS15215 3129301 .. 3129322 - -15.9  -5.30155   CCATCAATGAAAAAA           GACAGGCCC TTGC GGGCCTGTC            TTGCCGGCGGCGGGC 100 59
        nrdR 3128387 .. 3128411 -  -8.6  -2.90194   ACGGCCGCAACCACA         TGCACCCCGGC GTGC ACCG-GGTGCA          GGACGCCATCGTGCA  54 330
        ribD 3125741 .. 3125755 -  -9.2   -2.9006   AACCCATCGGATAGA               CGCGCG CCA CGCGCA               CCGCGTTCCGATCGC  56 98
CXD94_RS15175 NONE
CXD94_RS15170 NONE
CXD94_RS15165 3121371 .. 3121413 -  -2.5  -3.72576   CGCTGGCGCAGCAAA GCTGCG-CGCGGCTGGCCGAC CTG GACGGCCAGC-GCTTCATCGC GTTCTCGCGCGAGAA  53 380
CXD94_RS15155 3119438 .. 3119472 -  -6.3  -3.65522   CATGCAGGGCAACAA    CACCGGCCTGCTCGTCG GTC CGGCG-GT-GGCCGGCG    CCATTGCCGGCGCAT  57 138
CXD94_RS15145 3117344 .. 3117389 - -15.3  -3.05498   CATGCGATATATATA CACCGGC-CGGCGCGGCCGATG CGG CGTCAGCCGCGCAGCGCCGCCG CGCCTTCGCGCAGGC  77 6
CXD94_RS15135 3115642 .. 3115677 -   -19  -2.99319   AATGTCGGAGAGAGA    GGGGGGTGCCTGTCCC CGCC GGGACAGGCACCCCTT     GCCACGGGTCGGGAC  90 93
CXD94_RS15130 3114419 .. 3114449 -  -7.4  -2.66969   TATCAAGACAACGGA       GGGAGCGCGGATCG CAG CGATCCGCGGCAGC       GGTTTCCCGGGCGGC  50 175
CXD94_RS15125 NONE
CXD94_RS15120 3112650 .. 3112663 -  -4.5  -3.35813   CTTGATTTCAATCAA               GCTGCG CTT CGC-GC               TCCGGGCCGGGCTTC  51 4
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD 3108492 .. 3108525 - -28.3  -3.86015   CACCCCCGCCACAAA     CGACAACCCCCCGGG CAAG CCCGGGGGGTTGTCG      GCGAACCAAGGCCGG 100 74
CXD94_RS15065 NONE
CXD94_RS15060 NONE
CXD94_RS15055 NONE
CXD94_RS15045 3097317 .. 3097333 -  -5.7  -3.44229   AGCTTACGACGACAA              GGCGCGC CCG GCACCCC              CGGGATTGCACCCAG  53 54
CXD94_RS15040 3096575 .. 3096625 -  -2.3  -2.62184   CCGGCGCCTACATGA TGGCCCAGGCGATGGGC-GCCG-GC CTG GCGCGTCCGCCCGTCGGCTGGCACG TCATGGCCGGCCTGG  38 227
CXD94_RS15030 NONE
CXD94_RS15025 NONE
CXD94_RS15020 NONE
CXD94_RS15015 3093762 .. 3093772 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS15010 3092273 .. 3092288 -  -2.6  -3.61178   CCGAGTCATTTGAAA              TAGTTA GGAA TAACCA               TGCCCCGTGAAAACT  50 495
CXD94_RS15000 3091341 .. 3091352 -  -3.6  -3.48395   ATTCCGTCTATAGAA                CGCG ATGA CGCA                 GGGCAGGCAGGCTGG  49 6
        tldD 3089804 .. 3089821 -  -6.9   -5.9873   CTAGCACAAAAAAAA             CCGCGCG TCAC CACGCGA              TTTTTCCAGGCCAGG 100 66
        aroG 3088230 .. 3088250 -  -9.7  -2.52464   GCCGGCGCGAATCCA            TCATCGGGG CAG CCACGATGA            AGGATTACGCCTTGT  55 307
CXD94_RS14980 3074264 .. 3074286 - -19.2  -4.72272   GGCGGGCATGAAAAA           GCCCACGCGA CCT TCGCGTGGGC           TTGCCGGGCACCGCG 100 57
CXD94_RS14975 NONE
        glcE NONE
CXD94_RS14965 3069883 .. 3069918 - -15.4  -3.68619   TGGAATTCATCGAAA    CGCGCGTCAAGCCC TGGGTGGC GGGCACGACGCGCG     TCGATACCGGCCGCC  88 408
CXD94_RS14950 3065958 .. 3065995 - -20.5   -2.6563   CCGTGGAATAAGGCA   CGGGGCC-GGTGCGGCGC ATG GCGCCGCGCCGGGGCCCG   CCTAACGGCGCGCGC  95 27
CXD94_RS14920 NONE
        mnmA 3058616 .. 3058648 - -11.1  -3.73775   CCCAGGTTTATGAAA      CCGCTGTGGCGGCCG CGG CCGCGGCCACCGCGA      GACCGGCGCGCCTCC  73 63
CXD94_RS14910 3057675 .. 3057730 - -24.2  -3.05596   GACCGCCTGACCGAA CCGGCGTGCAATGAAAAAGGCGGCTC GCAT GAGCCGCCTTTTTCATTGCCGGCCAC CCTGGCCGCCGACCG 100 62
CXD94_RS14900 NONE
CXD94_RS14895 3054949 .. 3054964 - -10.4  -5.96521   ACGAACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTGCCTTGC 100 62
CXD94_RS14880 NONE
CXD94_RS14875 3051242 .. 3051276 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS14855 NONE
CXD94_RS14850 NONE
CXD94_RS14845 NONE
CXD94_RS14840 NONE
CXD94_RS14835 3045076 .. 3045093 -  -2.6  -2.66869   ATATGGAAGAACTCA             CCGCCA TCTCCT TGGCGC              CGGCGCGCCGGCGCG  38 49
CXD94_RS14830 NONE
CXD94_RS14825 NONE
CXD94_RS14820 NONE
CXD94_RS14815 3041701 .. 3041742 - -14.5  -3.53012   GCTTGTCGGCCGAAA GCACGCGCGCCGCCGGCCT GTCCTG AAGC-GGCGGCGC-CGCGC GGACGCGGCGCGCCG  81 43
CXD94_RS14800 NONE
CXD94_RS14795 NONE
CXD94_RS14790 NONE
CXD94_RS14785 NONE
CXD94_RS14775 3034361 .. 3034416 -  -7.2  -3.06696   TCGCGTCGGAATACA GGCCCAGGCAGCCGTGGCTGATGCGC CCGC GCGGCTCGACCGCGGTGGCCTCGACC ATCACCAGGCCGGCG  51 205
CXD94_RS14750 3030803 .. 3030817 -  -3.5  -2.72344   TTCGAGTTCGAATTA              GCGCGC ATGG GCG-GC               CTCCAGCAGTTGGAC  41 8
CXD94_RS14745 NONE
CXD94_RS14740 3029058 .. 3029074 - -10.8  -3.31144   GCCCGAGGGCTACAA              GCGCCG CTCGC CGGCGC              TCGATACCTTCAGGC  66 35
CXD94_RS14725 3026044 .. 3026059 -  -2.5  -3.33696   CTCCTGGGTAATGAA              CCAGGC GGTCG GCC-GG              CTCAGTTGATCTGTA  44 27
CXD94_RS14720 3024616 .. 3024646 - -21.8  -3.23899   GCTCAAGTAAGGCAA       GCCGCCCGGCCGGC ACG GCCGGCCAGGCGCC       GCTCAGCGCGGCGCG 100 28
CXD94_RS14710 3022540 .. 3022576 - -23.8  -4.26076   GCACCGCCATGAAAA   GGCGCGG-CGGCCTCCC GCGA GGGAAGCCGTCCGCGCC    GGGATGAGCGGCGGG 100 70
CXD94_RS14705 3021651 .. 3021684 -  -8.7  -3.18681   CGCGAACCCGACGAA     CTGCTGACGCCGGCCC AGC AGGCCGGCAAC-GCCG     AGCACTACGCCCGCC  56 400
CXD94_RS14690 3018524 .. 3018566 - -12.6  -3.16564   GGGCTACCTGATCAA CGCGGCGACGACCACGCTGG ACA CCAGCACCATGTTCGCCGCG CTGATCAGCCTGGCC  68 140
CXD94_RS14655 3012742 .. 3012752 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 178
CXD94_RS14650 3011693 .. 3011707 -  -3.5  -2.53382   ACGAGGCGCAAGTCA               TGCCC TCGAT AGGCA               GGCTGATGGCGCCCG  40 56
CXD94_RS14645 NONE
CXD94_RS14640 3008478 .. 3008499 - -12.9   -3.8591   TCCTACAATGAATAA           CGGCGCGGG CACG CCCGCGCCC            GCGGATACCGACACG  83 52
CXD94_RS14635 3007068 .. 3007093 -  -3.1  -3.15544   GCTGATGCTGACCAA         GCGCGCCGCCA GCTA TTACGCCACGC          CGCAGATCGCCTTCG  43 186
CXD94_RS14625 NONE
CXD94_RS14620 NONE
CXD94_RS14615 NONE
CXD94_RS14610 3002202 .. 3002212 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 154
CXD94_RS14605 3000725 .. 3000735 -  -8.2  -3.13899   AAGCGTGCAGGAATA                 CGCC CTG GGCG                 GCATGTACGATTTCG  56 488
CXD94_RS14590 2997443 .. 2997477 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS14575 2995466 .. 2995479 -  -3.8  -3.53224   CATTTGCCCGTCAAA               GCGA TCAAAG TCGC                CGCGAACGCGCACCC  51 314
CXD94_RS14565 2993549 .. 2993564 - -10.4  -2.89881   TATTCATTCGACACA              CTGCGG CGAA CCGCAG               CCCTGTGCGCATTGC  59 243
CXD94_RS14555 2993127 .. 2993142 -  -6.1  -3.31461   CACCCACTGGGACAA              GCGTG TCTCGC CACGC               AAAGACACCCGGACC  53 55
CXD94_RS14550 2991872 .. 2991900 - -17.5  -4.11216   CCGCCATTTTTAAAA        GGCCTTGCAACGC ATC GAGTTGCAAGGCC        TTGGTTTCTAGAGCC 100 127
CXD94_RS14525 2989353 .. 2989363 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 65
CXD94_RS14520 2988169 .. 2988225 -  -7.9  -3.63694   AGGCAGCTTCAAGAA GCC-CGACGCCGGCG-TGCATGTCGGGCC GCT GGC-CGCC-CGCGGCGCCGGCGCGGTGGC CCTGAGCGTGCTCTT  60 149
CXD94_RS14500 2984433 .. 2984457 -  -5.6  -3.91897   CGTTGCACGGATAAA         GACGGGCC-GC GACG GCTGGCGCGCC          AGGACGAGGCTGTCC  63 51
CXD94_RS14445 NONE
CXD94_RS14440 NONE
CXD94_RS14435 NONE
CXD94_RS14430 NONE
CXD94_RS14425 NONE
CXD94_RS14420 NONE
CXD94_RS14415 2970149 .. 2970176 -  -4.7  -4.07568   CGGCGTGGCGGAAAA        GGCCGCCGCGT TCGTGC AGGCGATGGCC         GAGGTGGCAGGGGCG  63 253
CXD94_RS14370 NONE
CXD94_RS14365 NONE
CXD94_RS14360 2958305 .. 2958329 -  -3.4  -3.61517   ATTCGTCGTGAAGAA          GGATCCGGCC CTGAC GGCCGAAGCG          GTGCTGCAATGGTGC  51 154
CXD94_RS14350 2955369 .. 2955405 -  -5.1  -3.13403   GGTGCGGCACGAAGA  CGGCTCGCTGGCGAC-GC TGCG GCTGCTGCC-GCG-GCCG   CTGACGCGCACGCTC  47 132
CXD94_RS14340 2953449 .. 2953475 -  -4.3    -3.445   TTATGCAGGAAAAAC         GTGTCCTAAGC GCGCG GCTCAGGTCGC         CAGCTTCACGATTCC  51 17
CXD94_RS14335 NONE
        mgtE 2951368 .. 2951378 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 157
CXD94_RS14305 NONE
CXD94_RS14300 NONE
CXD94_RS14295 NONE
CXD94_RS14290 2942569 .. 2942585 -  -2.2  -3.13522   ATCGCGGGATCAATA              GGAGAA TTCAT TTCGCC              TTACCTGTCACGGGC  42 176
CXD94_RS14285 2941604 .. 2941617 -  -2.3  -3.09933   CGGCAAGCCATGCAA               TGCTG GCCC CGGCA                AGGGATAGCCCGCCA  42 190
CXD94_RS14280 2941164 .. 2941178 -  -7.1  -2.70932   TGGGTCTGCCAACCA               GGCTC TGTCT GAGCC               CTGTTACTCGGCCGC  48 29
        priB NONE
        rpsR NONE
CXD94_RS14265 2939936 .. 2939952 - -10.8  -5.75342   GCCCTCGAAAAAAAA              GCCGGC ACCAG GCCGGC              TTTTTTCAGGCATGC 100 48
CXD94_RS14260 NONE
CXD94_RS14255 2937484 .. 2937517 -  -2.9  -4.56597   CTGCGGCTCGAAAAA     GAGCCTGGCCAGCGG TATC CCGATGGCCCAGGTG      ATCTTTGCCGGACAG  71 160
CXD94_RS14225 2931427 .. 2931441 -  -2.1  -3.07935   ATCGGATTCATTTAA               GCAAA CCGTC CTTGC               GGAACATATCCTTGA  41 3
CXD94_RS14220 NONE
CXD94_RS14215 2928652 .. 2928689 - -28.5  -4.26076   GGACGGCCATGAAAA   GGCAACCCCCGGGCGCC TTGC GGCGGCCGGGGGTTGCC    CTTGCAAACAGCCTG 100 51
CXD94_RS14210 2928193 .. 2928217 - -17.1  -4.36914   GCTTGCGCGAGAAAA          GCCCGCCAGCA TCG CGCCGGCGGGC          TTTTTTTCACGGTTC 100 88
CXD94_RS14205 NONE
CXD94_RS14200 2925830 .. 2925847 -  -4.1  -2.52464   CGGTGCCCGAAGGCA             CGCAGGTC TTT GACCC-CG             TACCAGCGGTGGCTG  40 130
        garL 2921177 .. 2921194 - -11.3   -4.0616   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC  81 82
CXD94_RS14115 2911916 .. 2911937 -  -2.8  -3.25072   CGCATCATAACCGAA           CCGCCGCG CCGCCC CCCGGCTG            CCCGCAACGCCAGCA  46 109
CXD94_RS14110 NONE
CXD94_RS14105 2909769 .. 2909789 - -19.7  -3.75153   TGGCTGCAATGCAAA            CGGCCCGGC AGG GCCGGGCCG            TCTCGATCGCACGTG 100 47
CXD94_RS14100 2908274 .. 2908297 -  -6.6  -3.05343   CGCAGATGTCCAACA          GACGGACGCC AAAC GTGGTCCGTC           TATTCCGTGGACGCC  49 25
        pcaF 2906932 .. 2906947 - -10.4   -5.1925   CCAGAACGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTGCCATGCCGG 100 54
        clpS 2905449 .. 2905467 -    -8  -4.19704   CAAGGCCAGGCAAAA             CGACGCGG CGA CCGCGCCC             GATGCGGATCAGGTC  74 34
CXD94_RS14075 NONE
        pbpC NONE
        clpA 2895645 .. 2895658 -  -4.5  -2.94747   GCAGGCGATCAGAGA               GCGTG GATC CACAC                GGTCAGTCGATCAGT  45 28
CXD94_RS14060 NONE
CXD94_RS14055 NONE
CXD94_RS14050 2891949 .. 2891977 -  -5.3  -3.16564   CGCGTACGGTATTAA        GGTTAACCCGTAT ACG AAAAAGGTTAACC        TTCTGTTTTCGCGTC  49 20
CXD94_RS14045 2887717 .. 2887727 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 292
CXD94_RS14040 NONE
CXD94_RS14035 2885501 .. 2885533 -   -17  -2.71712   GCGGCTGCGGCAAAT     GGCGGCGCAGCGCCC CGGG GAGC-CCGCGCCGCC      GGCACAGGCCGATCA  80 38
CXD94_RS14030 NONE
CXD94_RS14025 NONE
CXD94_RS14020 NONE
CXD94_RS14015 2881830 .. 2881859 -  -3.3   -3.9461   GTTCCGCAAGAAGAA       CCGGCGCCCGTGC GTGC GGACTGGCTCAGG        CCTCGACTTCGCCCA  58 21
CXD94_RS14005 2879761 .. 2879776 - -11.8  -5.86061   CCCCACCAAAAAAAA              CCGCCC CGAG GGGCGG               CTTGAAAATCGAACG 100 58
CXD94_RS13985 2873745 .. 2873757 -  -6.2  -4.15565   CCGACGATGGCAAAA                GCGG GCAGG CCGC                TGCCCAGATGGGTCT  66 211
CXD94_RS13975 2870835 .. 2870868 -  -5.8  -2.64616   GCGCCAGCCAGATGA     GCGGCGACGTGCTG GTGGTG CAGATCGCCGGCGC      GGCGCTGGCCATCGT  45 443
        cyoB NONE
        cyoC NONE
        cyoD NONE
CXD94_RS13945 2864848 .. 2864880 - -14.1  -3.53012   GCGCCCGGGCGCAAA     CGCG-GGCGGCGCG CTCAGC CGCGCCGTCGCGCG      CGCAGCTCGTGGCGC  78 7
CXD94_RS13940 2864071 .. 2864104 -  -5.1   -4.1899   GGATCGGATTGAAAA     GGGCGGC-CGCGCTCA GAC CGAGCGCGTGATGCCG     CCGTCGATGCGGATG  69 4
        hutG 2863057 .. 2863091 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS13915 2858297 .. 2858318 -  -7.9  -3.78419   GGAGGAAAGATACAA           GGCACCCCG TCAT CAGGACGCC            TGGTGCCTGCCCGCG  66 16
CXD94_RS13910 2856935 .. 2856953 - -13.8  -3.21099   TGTCCCCATGACGAA             CGGCCGCC GCG AGCGGCCG             TTTGCTTGTCTGGCG  73 173
CXD94_RS13895 2854440 .. 2854461 -  -2.8  -2.64616   CCGCCAGGTACAGCA           GGCCCTGG TTCATG CCTGGCCC            GCCGCGCAGGGCAGG  39 13
CXD94_RS13890 2853537 .. 2853566 - -23.7  -3.53224   GACTGCCGCGGCAAA       GGGAGCCTGTCCC CGCT GGGACAGGCTCCC        GGGTATGTAGTTACC 100 36
CXD94_RS13875 2850495 .. 2850512 -  -2.5  -2.57344   TACGCGGCGCACAAT             CCCGGGC TGAA GGCCGGC              GCGGCCTGGTACGGT  38 356
        moaC NONE
CXD94_RS13855 NONE
CXD94_RS13850 NONE
        moaB NONE
CXD94_RS13840 2843259 .. 2843286 - -21.4  -2.70932   TCGGGGGGTGAACGA        GGTGCCTGTCCC CGTG GGGACAGGCACC         TGCGGTGTCCCTCGG 100 138
CXD94_RS13825 2839865 .. 2839875 -  -5.4  -4.09243   CATAGGCGCGGAAAA                 TCTC GAC GAGA                 AGAAAACATATTCTC  64 105
CXD94_RS13820 2839222 .. 2839239 -  -9.8  -4.65895   CGCTCCATGTAAAAA             CCCGGC CTGCGC GCCGGG              TTTTTACATGCCGCG  93 54
CXD94_RS13810 NONE
CXD94_RS13805 NONE
CXD94_RS13800 2833967 .. 2833996 -  -7.7  -3.28712   CGCGCTGGCGCACAA       GGCCGCCGC-GCGC GGC GCGCTGGTGCAGCC       GGCCGCCTACACGCT  55 297
         ggt NONE
CXD94_RS13765 2826502 .. 2826560 - -21.6  -4.65895   GTCGCCACCGAAAAA CGGGCGCGGCGGCGCCCGCGC-GCCGCG CCGAT CGCGGCAGC-CGGCCGCCGCTGCGGCGG CCCGCCGCCCCCACC 100 45
CXD94_RS13760 2825175 .. 2825222 - -11.9  -2.62184   TGGCGCGCGAGATGA CGCTG-TCGGTCCAGCCGCCGA AATAG CCGGCGGCCAGTCCGAACGGCA CCCCCACCGCCAGGG  61 344
CXD94_RS13735 NONE
CXD94_RS13730 2820481 .. 2820496 -  -2.4  -4.10657   CGATATCCTCGAAAA              GCTGGG TATC CCCGAC               AAGGCCCTGGTGCTG  61 414
CXD94_RS13720 2818811 .. 2818846 -   -11  -3.97636   ACTGGAATGGAGAAA    CCGGCGGCGCCGTCAGG CCG CCTTGCGGCGC-GCCTG    CTTGTCGGCGTGGGC  79 2
CXD94_RS13715 NONE
        paaI NONE
        paaJ 2816793 .. 2816811 -  -5.9  -3.37796   CTTCACCAGCGAGAA             CACCGGC GTGAT GCCGCTG             CCCACCGCGAACGCC  55 405
CXD94_RS13690 NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF 2810631 .. 2810662 - -18.8  -3.55444   CGTCTACCCCTGAAA      CGGCAACGCCGGCCA TGG CGGCCGGCGTTGC-G      CCCTGCGAACCCGCC  95 45
CXD94_RS13660 2808556 .. 2808590 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS13630 2800159 .. 2800180 - -14.5  -5.55769   CGGGACAATAAAAAA           CGGCCTTTC TCGC GAAAGGCCG            TTCGTAGGGAGCGCA 100 50
CXD94_RS13625 2792103 .. 2792137 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS13595 NONE
CXD94_RS13590 2786497 .. 2786520 -    -8  -3.27475   TCCCCGACCACAACA          GCCAGTGCCG CAAC CTGCACGGGC           ACCGGTACGTGCTGG  55 406
CXD94_RS13575 2785232 .. 2785269 -  -6.8  -3.53012   GCGCCGGCGGGCAAA   CAGCCCGGCGCGCGCT TCAGTC ATCGCGCACCCTGCCG    CGCAGGCGCTTGGTT  58 4
CXD94_RS13570 NONE
CXD94_RS13565 2783770 .. 2783781 -  -7.2  -3.72576   TGCTGCTGCAGGAAA                CGCG CGAG CGCG                 GCTACGCGGTGTGCG  64 326
CXD94_RS13555 NONE
CXD94_RS13550 2780637 .. 2780678 - -15.7  -2.52234   ACAAACGTCATGAAC GCGCATGGATGGCGGCGGC GCTG GCCGCCGGCAGCATTGCGC  TGGGCGGCGCCGTGC  69 493
CXD94_RS13530 NONE
CXD94_RS13525 NONE
CXD94_RS13520 2774965 .. 2775018 -  -5.2  -3.86897   GGCACGCGGCATAAA GGC-CGGCGTGGGCCTGGCGCAGCAT GGCG ATGG-ACGACAGGGCCACAGCGCGCC CGTGACCAGAACGGC  60 390
CXD94_RS13515 2774442 .. 2774493 -  -2.2  -4.59773   GGTGACGCTGAAAAA GCTGGACGGCTACGC-GCCGGTCCT GGTCG AGG-CCGCCCGCG-AGCTGTCGCGC CGTATTGGCGGCTGA  70 48
CXD94_RS13495 2768835 .. 2768851 - -10.8  -3.13403   CGGTGCCCACGAAGA              CGCGCC GGTCG GGCGCG              ATGATGTCCTGCACC  64 138
CXD94_RS13485 NONE
CXD94_RS13480 NONE
CXD94_RS13475 2764598 .. 2764617 -  -3.4   -3.5764   AACGCCAGTGGGAAA            CCCGCGCA GTGA TGTCCGGG             CTGTTCCACGACACG  51 510
CXD94_RS13455 2761057 .. 2761071 -  -2.7  -3.14881   GAATCGGGTCACGAA               GCTCC GGTCG GGCGC               GCGCCGCGCCTGTCG  44 4
CXD94_RS13450 NONE
CXD94_RS13445 2757226 .. 2757260 - -16.5  -2.53995   ATCCAGCTGAACTGA    CTGGTGTGCCTGTCCC CGCG GGGACAGGCAC-CCCG     TCATACGGGGGGCAG  77 61
CXD94_RS13430 2755577 .. 2755596 -  -4.8  -4.57073   CATCTGGTGGAAAAA            GGCCGCGC CCAT GCGCGCGC             GCAGCAACTCTACGC  72 359
        guaB 2749819 .. 2749856 - -22.2  -4.86731   CGGTTGGAAATAAAA   GCGCACCGGCCAGAACC TGGCC GGTTCTG-CCGGTGCGC   GATGCATTGCGTGAT 100 58
CXD94_RS13405 NONE
CXD94_RS13400 2747905 .. 2747921 -  -3.7  -4.12902   CAACTATTTGTAAAA              TATCTGA AAT TCAGCTA              TCAATCCACCGACTT  61 39
CXD94_RS13395 2747596 .. 2747606 -  -6.8  -3.16564   GCCCCATGTCACCAA                 TCCG CGT CGGA                 AGACCCTGCGGGACT  52 8
CXD94_RS13390 2745990 .. 2746040 -  -5.2  -3.75332   ATTCGCCAAGCCAAA GCCCAGGGCCAGCTCGCCGCCG ACACCAA CGAAGCCAGACTGGCCATGGAC CTGCTCGCCTACCAG  58 232
CXD94_RS13380 2743708 .. 2743730 -   -12  -3.58522   ATGACGATGCCGAAA           CTGGCCGG CGACAGC CCGGCCAG           CAAGCCCGGATTTGC  72 314
CXD94_RS13370 NONE
CXD94_RS13365 NONE
CXD94_RS13360 NONE
CXD94_RS13355 NONE
CXD94_RS13350 NONE
CXD94_RS13345 NONE
CXD94_RS13340 2735346 .. 2735367 -  -2.8  -2.74999   CAACCCGCAACAGGA           TCCGCGTC ATCCCG GGCGCGGC            GGCCGCCGACTGGCC  40 252
CXD94_RS13330 2733466 .. 2733479 -  -3.8  -3.64703   TCGCGGCCAGCGAAA               CAGC CGCCCT GCTG                GCCTCGCTGGCGCCC  54 440
CXD94_RS13315 2729959 .. 2729981 - -10.4  -2.81464   CGACCAGCCATGATA           CTGCGCGGCC CCT GCCCGCGCCG           CCGTCCTATTGCGTT  59 119
CXD94_RS13310 NONE
CXD94_RS13305 2728782 .. 2728820 -  -8.6  -2.70932   GGTTGCCGGCAAGCA   GGTGGCGCACGGACTGGC CGC GCGAGGCCTTGCGCCCGC   CTTGCGGCGGCCTAG  52 37
CXD94_RS13300 2727528 .. 2727542 -  -3.4  -3.35073   ATCATGGGCAAGGAA               GACGTG CTG CGCGCC               TCCAGGTCCGTCCCC  47 204
CXD94_RS13290 2725358 .. 2725404 - -14.5  -3.36273   CGGCCTGAAGATCAA CAACTCCGCGGCCGT-GCT-GCA AGC CGCCATCGACGGCCGCGGCGTTG CGCTGGCGCGCAGCG  79 298
CXD94_RS13280 2723816 .. 2723844 -  -2.4  -2.57931   GCCACCGCCGACAAT       GGCCACGCGCACGC TCA GCATGC-C-TGCCC       CTGGTCCACGGCCTG  38 11
CXD94_RS13275 NONE
CXD94_RS13270 2721619 .. 2721636 -  -5.5  -2.63596   GGTGATTGGACAGGA             CCGCG-GC CAG ACGCGCGG             ACTCAGTCTTGGTCG  44 28
CXD94_RS13265 2719957 .. 2719971 -  -9.2  -3.44146   CGCCGCGACAACGAA               CGCCGC CGC ACGGCG               CTGCTCGAGGCCATC  61 408
CXD94_RS13255 NONE
CXD94_RS13250 NONE
CXD94_RS13245 2716521 .. 2716533 -  -6.2  -3.31726   GGCCGTTATAGAACA                GCCG CGGAC CGGC                GCGCCCCCCCCCCCC  53 427
CXD94_RS13240 NONE
CXD94_RS13235 2713936 .. 2713957 -  -2.9  -2.94099   TCGCCTGACGAGATA           GGCCCACATG GTT CA-GCGCGCC           CCGCCGGTTTTCTCG  41 16
CXD94_RS13230 NONE
CXD94_RS13225 NONE
CXD94_RS13220 2710509 .. 2710529 -    -6  -3.53012   GCCGCCCCCCGCAAA            GGCCGCTG TCAGG CCACGGCC            GCCTCCCGCGCGCGG  56 13
CXD94_RS13215 2709299 .. 2709312 -  -3.7  -3.16647   TCCAGGCATGAAAAT               GCCAG GAAT CGGGC                CGGCTGCCCAGGGCA  45 85
CXD94_RS13210 NONE
CXD94_RS13205 2708321 .. 2708357 - -18.8  -2.70932   GGCCGGCGTCAACGA   GCGCGGCGCCGCGCTCGC CCC GCAAGCGCG-CGCC-CGC   CAGGCCATAGGCGGC  87 44
CXD94_RS13195 2706523 .. 2706537 -  -3.4  -3.57144   GGTTCCAGGCCGAAA               CCAGCG TGA CGGCGG               CGCTGCGCGAGCGCG  51 498
CXD94_RS13185 2704937 .. 2704947 -  -2.4  -2.80816   CCTGCAGGTAGCACA                 CCGG CGC CAGG                 GTCGAGGTGTTCTCG  40 310
CXD94_RS13175 2704622 .. 2704637 -  -3.2  -4.00066   TGGACAACTGACAAA              CGCTTT AACA ATAGCG               CGCCGATTGCGTCGC  58 98
CXD94_RS13170 2703426 .. 2703460 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 439
CXD94_RS13160 2701791 .. 2701828 -  -3.9  -3.56594   TGAAATTCGCCCAAA   GCCGGCC-CAACCCGCCG CTG CCCCAGGCCGCGGCCGCC   GACTATATGGGCACC  51 491
CXD94_RS13150 2699445 .. 2699458 -  -8.1  -3.28712   GGGCCTGGGCCACAA               GCACG GCAT CGTGC                TGGGCAACCTGGTCG  55 237
CXD94_RS13140 NONE
CXD94_RS13135 2697537 .. 2697555 -  -2.4   -2.8655   GCGAGGCATAGTAGA             TCTCCCTT ATC AAGCGAAA             GGCATCATCGCTTTC  40 16
CXD94_RS13130 2697116 .. 2697146 - -16.2  -4.09685   TTTGAGCCTTCAAAA       CGCAAACGGGGCCA TTA CAGCCCCGTTTGCA       GCGATCCGCGATGTA  95 50
CXD94_RS13125 NONE
CXD94_RS13120 NONE
CXD94_RS13115 2693292 .. 2693305 -  -2.3  -3.88137   ACAATTGCCGACAAA               GCGTA TCAC TCCGC                AGAGGCGGGGTCCGG  54 17
CXD94_RS13110 2692763 .. 2692792 - -15.8  -4.41047   AGCGCCCAAGGAAAA       CGCCGCC-GGTTC GCGAA GAACCAGGCGGCG       TCGCGGCCTGCCGTA 100 61
CXD94_RS13105 2692537 .. 2692571 -   -26  -3.45027   AGTCCCCACGAAAGA     CAAGGCCGTCAGTGAT GTG ATCACTGACGGCCTTG     GAACTACTGGTCGGG 100 33
CXD94_RS13095 2690422 .. 2690455 - -15.9  -3.14564   GCACGGGCCGAGGAA     GCGTGCCGGACTGCC CACG GGCAGCCCGGCGCGG      ACTACAGCTCCAGTT  78 27
CXD94_RS13085 2688853 .. 2688876 -  -8.8  -2.58892   AGGCAGATCAATTGA          GCGCCGCC TCGCGCAT GGCGGCAC           AGCCCCGCCCCGGCA  52 263
CXD94_RS13080 2688493 .. 2688516 - -14.6   -5.0925   TGCGAAAACGAAAAA          GGCCTGGCGA TGAA TCGCCAAGCC           TTTTTGATCTGGTTG 100 35
CXD94_RS13075 2687664 .. 2687709 - -12.7  -3.05844   TCGTGGACTTCAAGA CCCGCCGCATACAGCCGCGCA AGTACG TGCGCGGCCGTAT-CG-CGCG CATCCAGTTCTACAT  66 360
CXD94_RS13065 2686791 .. 2686821 - -10.4  -4.86621   ACGCCCAATGAAAAA      GCCGCCTTGGCGC CCTATC GCGGCA-GGCGGC       TGCGCACGGTGCGGC 100 59
CXD94_RS13060 NONE
CXD94_RS13055 2685800 .. 2685816 -  -7.3  -3.20348   GGGAGGAATACGGAA              TATACGC AAT GCGCATA              TTATTCGACCCCAAA  52 89
CXD94_RS13050 2684429 .. 2684487 -  -7.9  -4.07568   GCTGGGCGGGGAAAA GCGCGTCTGACGCGGGCTCGCGTGGCGC TGGC GCGCCACGCGATACGGC-TCAGTCCAGG CCGTGGAAGACGGAA  69 16
CXD94_RS13040 2682794 .. 2682814 -  -6.8  -3.40403   GCCCTTTCACTACAA           CCGCGCGCC GGTG GGCG-GCGA            AACCAGCCCGCCCGC  55 180
CXD94_RS13025 NONE
CXD94_RS13020 NONE
CXD94_RS13015 NONE
CXD94_RS13010 NONE
CXD94_RS13005 2676665 .. 2676675 -  -3.2  -3.05384   CCCCTGCGGACTCAA                 CCGA CCG TCGA                 GCGCCACAGGGCAAT  42 11
CXD94_RS13000 NONE
CXD94_RS12995 NONE
CXD94_RS12990 2672866 .. 2672880 -    -7  -5.15969   CCCCAAGGCAAAAAA               GCCTCC TCG GGGGGC               AGCAAGCCCGCATAG  93 161
        recA NONE
        recX 2666775 .. 2666821 -  -9.3  -3.33815   ACGGGCCGCAAGCAA GCCCCAGGCAGGCGG--GCCCGC ATC GCGCGCCGCCGCCCGCACGAAGC GGCATCGTTCAGTCG  61 34
CXD94_RS12955 2663222 .. 2663242 -  -6.7  -3.40403   TCCTGGGGAGTATAA            CGCAGCCGA TTG CCGGCGACG            CGGCCCGGGCCGACC  56 153
CXD94_RS12950 NONE
CXD94_RS12945 NONE
        sucD 2660440 .. 2660459 - -16.4  -5.78622   GCATGCGAAAAAAAA            CGGCCCGC GATC GCGGGCCG             TCCTGGGACAGGCGG 100 57
CXD94_RS12935 2659456 .. 2659498 - -23.5  -5.07652   GCGGCCAAAAGAAAA CGGGCTGGTCAG-CCCCGCC TGAA GGCGGGGCCCGAACAGCCCG CTATTGTAGTTCAGC 100 47
CXD94_RS12930 2658542 .. 2658575 -  -5.9  -4.03413   AGGGCGTCAGAGAAA     GCTGGAGACGATGAC CGAA GCCACCACCCCCAGG      ATGGCCAGCACGAAC  66 92
CXD94_RS12925 NONE
CXD94_RS12920 NONE
CXD94_RS12915 NONE
CXD94_RS12910 2653937 .. 2653954 -  -2.6  -4.23781   TTGATGAAAATGAAA             TCAGGC TTTGTC GCCGGA              CGCCGGGCCGGCGGA  62 8
CXD94_RS12905 2653303 .. 2653344 - -23.8   -4.2231   AAGCATGACGCAAAA CGGCGCGGATGCGAGCGGC TGCCT GCCG-TCGCTTCCGCGCCG CCGGCCGCCCCAGGC 100 53
CXD94_RS12900 NONE
CXD94_RS12895 2652280 .. 2652299 - -12.8  -5.07652   CGCGGCAAAAGAAAA            GCCCCCGG ATGA CCGAGGGC             TTGCATCATGCCGGC 100 50
CXD94_RS12890 NONE
CXD94_RS12885 2650356 .. 2650394 -   -11  -3.01712   CCTGCCGCGCCAAGA  TGGCGGTGCGCGG-GGCA GACGG CGCCGCCGCGG-CCGCCA  TGAACGCCGCGACCC  62 185
CXD94_RS12875 NONE
        cpaB NONE
CXD94_RS12865 NONE
CXD94_RS12860 2644605 .. 2644618 -  -8.1  -3.53012   GCCCGGCTCCTCAAA               CGTCG ATGG CGACG                ATGCGGCGGATCAGC  60 7
CXD94_RS12850 NONE
CXD94_RS12845 NONE
        folD 2641214 .. 2641228 -  -3.4  -3.75933   ATAGACGCGAGCAAA               TCCGCC GGC GGCGAT               TTCTCCGATCGCACG  55 187
CXD94_RS12820 NONE
CXD94_RS12815 NONE
CXD94_RS12810 2633477 .. 2633487 -  -6.8  -3.07816   GTGCGAGTTATCCAA                 GGAG ACG CTCC                 CGTTCGATATCGACG  51 7
CXD94_RS12805 NONE
        purU NONE
CXD94_RS12795 NONE
CXD94_RS12790 NONE
CXD94_RS12785 2628684 .. 2628705 - -14.5   -5.1287   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTTTTGCAT 100 53
CXD94_RS12775 2627286 .. 2627308 -  -9.8  -3.40403   GGCGCGCCAGGACAA           CGGCCTGTAC GAC ATGCAGGCCG           TACTGGGCCTGTAAG  65 76
CXD94_RS12760 2625350 .. 2625371 - -15.9  -6.10489   AACCGCAAAAAAAAA           CCTCCAGGC TTGC GCCTGGAGG            CAGGGTTGGTAGAGC 100 48
        hrcA 2621570 .. 2621587 -  -5.5  -3.54382   GCGAAGAAACACGAA             GACACCT CTCA AGGCGCC              GCCCCGCGCGCAGGC  54 62
CXD94_RS12740 2620436 .. 2620453 -  -8.3  -2.52676   CATTCGCGGAATGGA             CCGGCGC GCTC GCGCCCG              CCGCTTCAACCACAG  51 50
CXD94_RS12735 2620100 .. 2620125 -  -3.8  -5.52384   TTTCCAGGAAAAAAA         GCCCGGCTCC CATGAC GCCGCCGGAC          GGCGCGTCGCCGCCC  90 54
        grpE 2619436 .. 2619480 -  -5.6  -3.05384   CTCGGCGGGATCGAA TGG-G-GCGGCGGCCATGCCTG CTT CAGCCCTGGCCGGCGGACACCA CGACCAGCGCCGGAC  47 3
CXD94_RS12725 2619022 .. 2619040 -    -3  -2.78725   ATACGGTAGGAATCA             GGGTTTGA AAC TCAGTCCC             CCAGTAACTGGAGTT  40 55
        dnaK 2616995 .. 2617037 - -18.5  -3.27298   GTTCTGAATCATCAA CGCG-CGCGCCCGGTAGCTG GAAT CAGCTACCGGGCGTATCGCA CGTCATCGTTCGGCC  93 42
        dnaJ 2615723 .. 2615752 - -22.3  -2.88249   GACATCCGCGACAGA       GTGTGCCTGTCCC CGCT GGGACAGGCACAC        TGCTCTACGCCATGA 100 93
CXD94_RS12705 NONE
CXD94_RS12700 2611421 .. 2611452 -  -7.9  -3.85864   CGAGCACTACAACAA      GGAGGCCGGCGCGG TCTGG CTGCGCCGGC-TGC      TCGACGCCTGGCCCA  67 187
CXD94_RS12680 NONE
CXD94_RS12675 2607554 .. 2607582 - -16.7  -4.38712   CCGAGCGCTAGAAAA        GGAAAAGCCCCCG GAT CGGGGGCTTGCCC        GGCGCCGCTTACTGG 100 34
CXD94_RS12665 2605606 .. 2605630 - -11.4  -5.02074   CCATTCGGCAAAAAA         CCCGCTACCCC CATA GGGGC-GCGGG          TTTCTCGGCTGATGC 100 60
CXD94_RS12660 2604411 .. 2604428 -  -3.3  -2.74864   TGTAGAAGCAAATAC             CGGACCG GCCT CAACCCG              AAACGGAATCCCACA  40 83
CXD94_RS12655 2603050 .. 2603060 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS12650 2601656 .. 2601678 -  -7.6  -3.17212   CGACTACCTGACCAA           GCCGTTCGGC GTC GGCGAACTGC           TGGCGCGCCTGCGCG  53 393
CXD94_RS12615 NONE
CXD94_RS12610 2590615 .. 2590649 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS12580 NONE
        lolA 2583639 .. 2583659 -  -3.3  -3.05596   CACGGGCGGATCCAA           CG-CGCAT TACACC ATGCGGCG            GCCTTGGCCCGCAGG  42 74
CXD94_RS12570 NONE
CXD94_RS12565 2580818 .. 2580835 - -11.3  -4.98531   CGCCGAAATGAAAAA             CGGAACC CGCG GGTTCCG              TTTCTGGTTCACGTG 100 54
CXD94_RS12560 2580178 .. 2580195 - -14.1  -4.95957   CAAATCAATGAAAAA             GCCGCCC GGAT GGGCGGC              CTTTTTTTGCGGCAC 100 167
CXD94_RS12545 2578774 .. 2578787 -  -9.5  -3.28791   ACGGCTGGCGCATAA               CGGCC CGCG GGCCG                GTCAGCCTTCCTGGC  61 27
CXD94_RS12535 2577125 .. 2577146 -  -7.3  -2.78463   AGGCGCTGCAGCAGA           TCACGC-CCA GCA TGGCGCGCGA           GATGGTGTTCTTCCC  49 352
CXD94_RS12480 2563963 .. 2564011 -  -6.6  -2.70932   CGCCGCCGGCAATGA TGGCACGGATCCGTGACCGGGC GCGGTCA GCCCGGGC-CGGA-CCGCTCCT CGTTGTCCGCGGCGG  47 3
CXD94_RS12475 2563073 .. 2563083 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS12470 NONE
        yaaA 2561231 .. 2561268 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
CXD94_RS12460 2559533 .. 2559547 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  61 494
CXD94_RS12435 2555326 .. 2555353 -  -7.6  -3.88291   GATGACTCCTAGAAA        CGGGCCGCATTG TACG CGATCCGACCCG         AGTTGATCTCAATCC  66 34
CXD94_RS12430 NONE
        plsX 2554017 .. 2554033 -  -4.4  -3.14211   AGCTTTTTCCATCAA             GCGG-TG TCCC CAGCCGC              GCCGGGCGCGACGGC  47 5
CXD94_RS12420 2552980 .. 2553027 - -11.9  -2.50816   TCGGTATGGAGGAAT GGCGG-CGTGCGCGGT-CGCGCA CAGG CGCGCGCAGCGCGCCCTTCCGCC TACATGCGGGCCAGC  61 25
        fabD NONE
        fabG 2551215 .. 2551248 - -12.3  -4.03234   GCGTTTCCACAGAAA     CGCGCGGCTGGGC TTGGATGG GCCGCGCCGCGCG      CTTCTCACTATTGCA  83 33
CXD94_RS12405 2550767 .. 2550787 -  -4.5  -3.55563   ACGGCATTCCTGAAA            CCGCCCCGA TTC CCGGCGCCG            CCCCGAAGTGTTCGA  52 72
        fabF 2549397 .. 2549431 -  -6.5  -3.69216   CGGTTATCGAAAATA    CCGC-CGTCCGGGTTCA ACT CAAACCCG-ACGAACGG    CCATCGAACCGTTGG  59 9
CXD94_RS12395 NONE
        rpoE NONE
CXD94_RS12385 2547796 .. 2547809 -  -2.3  -3.54408   GCGCATGTAAAGCAA               CGGTG TCAT CAACG                TCCTGCTCCGGCGTC  48 20
CXD94_RS12380 NONE
CXD94_RS12375 2545160 .. 2545184 - -22.9  -4.65895   CGGGCGAGCCAAAAA          CGAGGGGGCGC CAT GCGCCCCCTCG          TTGCGGCAACCAGCC 100 62
CXD94_RS12370 NONE
        lepB 2542399 .. 2542412 -  -3.7  -3.17392   TAGCGGTCAATGGAA               GCGGC CAAT GCGGC                TCAAATCGCTGAAGT  45 3
CXD94_RS12360 NONE
CXD94_RS12355 NONE
        recO NONE
CXD94_RS12345 2539058 .. 2539084 - -15.9  -3.14344   GATGTCGCGGACGAA        CAG-GCCGCGCG GGCC CGCGCGGCGCTG         GGCGCGCTGGGCATC  80 157
        lptF 2530381 .. 2530406 -  -6.1  -3.01791   ACGTGCTGCCCAACA         GCCAGGTGGTGC TGC GCAGCACC-AGC         GTCATCGCCCAGTAC  48 280
CXD94_RS12290 2528275 .. 2528288 -  -2.3  -3.14132   CTTGCCGCCGATCAA               TAGCG ACTT CGCTC                ATTTCTCTGCTCCTC  42 124
        mmsA 2526712 .. 2526735 -  -8.2  -3.15544   CTGCAGGTTCATGAA          TTGGCCCCTGT TAG AC-GGAGCCAA          TTATAAGTAATATAG  56 98
CXD94_RS12280 2525555 .. 2525589 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS12270 2524089 .. 2524106 - -14.1  -4.41895   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 77
CXD94_RS12255 2520551 .. 2520597 - -21.5  -2.62184   TGCTGGTGTAGAGCA GCCGGCGCTTGCCGGCGCGCGC ATCG GCGCGCG-CGCCCAGCGTCGGC ATGGTCAGCATGATG 100 294
         acs 2517234 .. 2517264 - -14.7  -4.17089   TGCAAAGCCGGAAAA      GGCACGGGCCGGTC ATGC GACCGGCCCG-GCT       GGCTACAGACTGACG  95 101
CXD94_RS12240 NONE
CXD94_RS12235 2515253 .. 2515278 -   -14  -3.28712   GCGGGCGGCTGAGAA         CGC-GCCGCGC TCAGC GCGCGGCCGCG         CAATGCCCGCGTACC  75 10
CXD94_RS12210 2510105 .. 2510144 - -14.2  -3.62597   GGTACGCGTGAAGAA  GGCCGGAATGCCG-GCGCC GCC GGCGCGCAGCTTCTCGGCC  AGCGTGCCCTGCGGC  80 439
CXD94_RS12200 2509048 .. 2509065 - -14.1  -5.75945   ATGGGCGAAAAAAAA             CGCCGGC TAAC GCCGGCG              CCTTACATACAAAAA 100 51
CXD94_RS12195 NONE
CXD94_RS12190 NONE
CXD94_RS12185 2505035 .. 2505058 -  -2.3  -4.71426   GGTTGAGGAAGAAAA          TGCGGCAGGC GCCAA GCC-ACCGCG          TTCAATACGCGCCGC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 2501487 .. 2501544 - -13.4  -3.48276   CGGCCCTGGAGATAA CAGGGC-CGCCGCGCGGGC-GGC-CCG ACCGGCG CGGCGCCTGCATGCGCCGCGCGCCCTG CCCTACTTGCGGTCT  75 28
CXD94_RS12165 2500387 .. 2500399 - -10.5  -3.38291   GGGAGAATGTCAGAA                GGCCG TCT CGGCC                AGCCACTGGCGCCAC  65 7
CXD94_RS12155 2497563 .. 2497573 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 194
CXD94_RS12150 NONE
CXD94_RS12145 NONE
CXD94_RS12140 NONE
CXD94_RS12135 NONE
CXD94_RS12130 2492335 .. 2492381 - -14.3  -3.09581   CAAACGCGGAAGACA GCGGT-TTCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGATTACTGA CCATTAACGCAGGTT  73 29
        ftsB 2491907 .. 2491922 - -10.4  -5.86332   CCAAGGCAAAAAAAA              CTCCCC TGGC GGGGAG               TGTTGGCGCGTCCGG 100 50
CXD94_RS12115 2489354 .. 2489374 -  -4.5  -3.04792   TGATCAGGCGCAAGA            GCGGCGTCA TTG CGGCGCCGG            GGAGCGACTGAGCCA  45 11
CXD94_RS12110 NONE
CXD94_RS12105 2488109 .. 2488136 -  -6.2  -3.39784   CCAGGCCGAACAACA        CGCGCAGCGCCTG GCC CAGG-GCTGGCCG        GGCGGAGCCGGGCCG  55 294
CXD94_RS12025 NONE
        sdhC NONE
        sdhD NONE
CXD94_RS12010 NONE
CXD94_RS12005 2467038 .. 2467048 -  -6.8  -3.01906   CCAATAAACACTAGA                 CCGT ACG ACGG                 ACCATCAGTTCCTTG  51 10
CXD94_RS12000 NONE
CXD94_RS11995 2465374 .. 2465387 -  -9.5   -5.4505   GCCGGCAAGAAAAAA               CCGCC CGAA GGCGG                TTCTTTCAGTGGACG 100 54
CXD94_RS11965 NONE
CXD94_RS11960 NONE
CXD94_RS11955 NONE
CXD94_RS11950 NONE
        potA NONE
CXD94_RS11940 NONE
CXD94_RS11935 NONE
CXD94_RS11930 NONE
CXD94_RS11925 2450980 .. 2450998 -  -5.2  -4.36914   TGCTGGCCGAGAAAA             TCACCGAC GCG GCCGGCAA             CATGGCGCCGACGGT  69 331
        rmuC 2449045 .. 2449084 -  -5.5  -3.90744   TTGGCGGCGAAAGAA  TTGGGCGGACCGCCCGCC CCGCC GG-GGGCTCTCCGCCCCC  GCGCCTGCTCCTCAG  63 37
CXD94_RS11910 2447368 .. 2447382 -    -7  -2.96984   GAAATTTAGCAGATA               CCGGGC CAG GCGCGG               GCCAGAATCGGGGCC  51 1
        rpiA 2446515 .. 2446543 -  -5.2  -4.07885   TAGTGCCCCTGAAAA       CGCGGTTGCGCAG AGGG CTGCCCGACC-CG        CAAGGTTATGACCCG  64 106
        phoU 2445494 .. 2445549 -  -8.1  -3.05596   CAGGCGCGGATTGAA TCGGCCTA-TGGCGAGGCGCCCG-CGC TGCT GCGGCTGGCGCCGGGCGAGCAGGCCGC CTGGCCATATGAACC  52 166
        hrpA 2437927 .. 2437967 - -17.6  -3.57263   ACTGGCACCCGCAAA CTCTCGGGGTGCCTGTCCC CGCA GGGACAGGCA-CCCGTGGG  ACAGCCCCCTACCGC  90 34
CXD94_RS11870 NONE
CXD94_RS11865 NONE
CXD94_RS11860 NONE
CXD94_RS11855 NONE
CXD94_RS11850 2429255 .. 2429286 - -13.6  -3.04144   TGTTCATCTGGAACA      GTCCCGCCGCGCCG GCCC CGGCACGGCGCGAA       TACGACGCGCCCTAT  69 250
CXD94_RS11840 2426822 .. 2426839 -    -4  -3.76641   AGCGCAATACGCAAA             CGTCGC TTATCC GCGGCG              GCGCCTGTCTTCATA  57 14
CXD94_RS11835 2425258 .. 2425286 -  -2.3  -3.27743   CATCATCAAGGAATA       CGC-CGGCCTGT TCGTCT ACTGGCTGCGCG        GCTGGGTGTAACGGC  44 438
        msbA 2421529 .. 2421545 -  -6.5  -3.53012   TGGCCGCCGCCGAAA              CCATGGC GCC GCAATGG              GCGCAACAGGTGTTG  55 148
CXD94_RS11805 NONE
CXD94_RS11800 2418262 .. 2418275 -  -3.7  -4.74103   GGCCGAACTGAAAAA               GGCGC TCTC GCGCG                ACCGCACGCGCATGA  77 418
CXD94_RS11780 NONE
CXD94_RS11775 NONE
CXD94_RS11770 2413488 .. 2413526 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CXD94_RS11765 2410253 .. 2410263 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 2410044 .. 2410078 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CXD94_RS11755 2406890 .. 2406943 -  -6.6  -3.76224   TGCCCATCTACGAAA CCGCCGCCCTGCTGCGCAGCGC-CGGC ATC GCCGTACCCTGAGC-G-ACGCCGGCGG CGCGCGGTCACCAGC  62 33
CXD94_RS11715 2400008 .. 2400040 -  -4.6   -4.1899   CCAGTGTATGCAAAA      CGCGGCGGCCGTCA CAATC TGCCGCCTGCCGCT      CAGCGTCGCCGCGAC  66 25
CXD94_RS11710 2398520 .. 2398542 -    -9  -3.03441   CATCACCGCCGAACA           GGTGCGCGAC ATG GTCGCGCGCT           TTGCCCGCACCCTGG  55 107
CXD94_RS11700 2395721 .. 2395779 - -15.8   -3.6106   TGGAATATGTCGAAA GCGGCCGGCGCGAAGGCGCGCGGCTGC GCATGG GCGG-CGAGCGCGTGCGCGCCGACAGC GGCGGCTACTACATA  85 396
CXD94_RS11665 2388232 .. 2388261 - -18.5  -3.09492   TCGCCAACGGCAAGA       CGCGCGCCCAGGC CGAA GCCCGCGCGCGCG        AACTGCTGACCCTGG  85 432
CXD94_RS11640 2381497 .. 2381545 -    -8  -3.67296   CATTATCGATCCAAA CGGCGCGCGCGGCCAAGCGCGGGC CCA GCCGGCG-TCAGGCGC-CGCTCCA GGCCTCGGCGTTCAG  63 11
CXD94_RS11635 2380297 .. 2380335 -  -8.7  -3.03159   CCAAGTCCGCCAAGA  GCGCGGGCGGCGGCGCGGC CGA GGCG-GCGGCCGGC-GCGC  ACTGAGCGCCAGGCC  55 49
CXD94_RS11605 NONE
CXD94_RS11600 2372476 .. 2372495 - -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 54
CXD94_RS11585 2369192 .. 2369206 -    -7  -3.01924   GACGCTGGCCGAACA               GGGCGG CGC CGGCCC               GCACCTGATTACCGC  52 478
CXD94_RS11570 NONE
CXD94_RS11565 NONE
CXD94_RS11560 NONE
CXD94_RS11555 2363241 .. 2363272 -   -10  -4.07568   CTGCTTCCGGGAAAA      TGGGCGGGCCGCCGC CGT GCGG-AGCCCGCCGC      CGATGCGGGATTACT  78 36
CXD94_RS11545 2361785 .. 2361824 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD94_RS11540 2360538 .. 2360582 - -15.6  -3.17075   CGCCGGGCAAGGCAA GGCGGCC-GAGCTGCTGGCGC AGGC GCGCCAGCTGGCCTGGACGCC GCTGGTCGACGCCGA  77 197
CXD94_RS11525 2357377 .. 2357398 - -15.1  -3.01712   CGCGCTGGTCGAACA           GGCCGCGGC GGCG GCCACGGCC            ATGGAAGAACAGGCC  74 197
        greA 2354569 .. 2354589 -  -9.6  -3.07104   CGACAACGATACAGA            CGCCCGGC GCACG GCCCGGCG            TTCAGGAATTCGGAT  57 238
CXD94_RS11505 2352536 .. 2352573 -  -7.5  -3.16742   CTGAACGCTCACGAA   CGCGACCTGCGCAGCCGC CTG GAGGC-GCTCAGCGCGCG   CGGAGACGGCGCGGT  53 203
CXD94_RS11460 NONE
CXD94_RS11455 NONE
CXD94_RS11450 2344870 .. 2344883 -  -3.1  -3.17444   GGAGAAACAGACATA               TCGAA CCTC CTCGA                ATTGAAATCTTGACG  44 58
CXD94_RS11445 NONE
CXD94_RS11440 NONE
CXD94_RS11435 NONE
CXD94_RS11430 NONE
CXD94_RS11425 NONE
CXD94_RS11420 NONE
CXD94_RS11415 NONE
CXD94_RS11410 NONE
CXD94_RS11405 NONE
CXD94_RS11400 NONE
CXD94_RS11395 NONE
CXD94_RS11390 NONE
CXD94_RS11385 NONE
CXD94_RS11380 NONE
CXD94_RS11375 NONE
CXD94_RS11370 NONE
CXD94_RS11365 NONE
CXD94_RS11360 2330700 .. 2330722 - -14.2  -2.70932   GCGCTGCGCGAACGA           GGCTACGACA GCG TGCCGTAGCC           CCCCTGCCCGGGCCA  69 44
CXD94_RS11345 2328505 .. 2328519 -  -5.6  -3.59262   GCCGAGATCGCGAAA               CGGCCT TGC AGGCAG               GCGATGCAGCAGGTC  54 514
CXD94_RS11325 2321561 .. 2321577 -  -5.1  -2.78463   ACCTTGCGCAGCACA              TTGTGCG CGA CGCAGAA              CCTGCCTGCCGGCGC  43 398
CXD94_RS11310 2319636 .. 2319686 -  -5.5   -3.7108   AGCTGGACACCGAAA TCTACG-ATCG-TGAGCTGGCCG GCTGGAT CGGGCAGCGCATCGACGCGCAGA TCCGCCACGCGCGGC  58 123
CXD94_RS11300 2318052 .. 2318074 -  -4.1   -5.4505   CCGCCCAAGAAAAAA          GCACCC-GGC TTGC GCCTAAGTGC           CTGTTTTCAAACGAA  90 47
CXD94_RS11290 2314884 .. 2314924 -   -11  -3.53012   GGGTCCCGGGCCAAA  GCGCGCAGATCCCGGCCG TTACC CGGCAAAAGCCTGCGCGC  AGGCCGCGCGCCCGT  70 65
CXD94_RS11285 2314233 .. 2314267 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS11255 NONE
        ectA 2305815 .. 2305825 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS11245 2304775 .. 2304797 -  -6.2  -2.78463   AGCGTGTGCATCATA           CGGCGCCA TTGTACG TGGCGGCG           CGCCGGATGCCCCCT  47 39
CXD94_RS11240 2304162 .. 2304207 - -11.7  -3.04144   CGGCGAGGGCGAACA GGCCTGAGGCCGCGCGGGCCTG GCT CAGGCCTGCACGTCC-CAGTCG CCGCGCCCGCGGGTG  65 4
        tsaD 2299761 .. 2299779 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 204
CXD94_RS11205 NONE
CXD94_RS11200 NONE
CXD94_RS11195 NONE
CXD94_RS11190 NONE
CXD94_RS11185 2293848 .. 2293875 - -15.5  -3.75153   GCGCGCCAACGCAAA        CGTCCCGGGGC GTTGCA GCCCCGGGGCG         TCATTCCTGCGGATC  85 49
CXD94_RS11180 2292802 .. 2292855 - -14.8  -3.55444   GGGCCATGCCGGAAA CGGCTGTCCGAGCGGACGCCCCGTCC CCCACC GGACGGGACGTCC-C-CGG-CAG-CG CCTCAGAAGGTCCGC  81 28
        rlmD 2291300 .. 2291331 -   -18  -3.25169   CGAAGAACTGAGCAA      CACCGGGCGGCG CTGAACGC CGCCGCCCGGCG       GGCCGCCTCAGGCAG  89 33
CXD94_RS11165 2290465 .. 2290518 -  -4.3  -3.52877   ATGAAGAGATGATAA TTGTTAGCTATCAATTAATAAAATTT AAT AAATCTAATTAATTGATAG-TCTCAA GCAATCGATCGCTAA  52 48
CXD94_RS11160 2289644 .. 2289667 -   -21  -4.32201   CGAAGGAAGGGAAAA          GCCGGCGGCG GCAG CGCCGCCGGC           CAGGCATCAGGCCAG 100 32
CXD94_RS11155 2287960 .. 2287980 -  -8.1  -3.53811   CTGACCGTGCGCAAA            CCCGCCGCC GAC GGCTTCGGG            CTGCACGGCAGCGGC  60 170
CXD94_RS11140 2284161 .. 2284207 - -20.3  -4.87626   GCCGAACAGGAAAAA GCCCGGCTGGTGCCG-TTCCTC ATGG AAGGAATCGCCACCAACCGGGC CATGTTCCAGGCCGA 100 116
CXD94_RS11130 2282927 .. 2282937 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS11120 2281905 .. 2281944 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD94_RS11110 2280590 .. 2280631 -  -7.9  -3.89354   GGTCGAAACGAACAA TGGCGTGGTGACGCTGACCG GCA CGGTCGGCACCGCCAC-CGA GGCGGATCAAGCAGC  67 268
CXD94_RS11075 2271378 .. 2271413 -   -19  -3.14132   CTGTCCCCGCAGGAA    TCCTGGTGCCTGTCCC CGCT GGGACAGGCACCCGGG     CACTCGGGCACCCGG  90 50
CXD94_RS11065 2269309 .. 2269330 -  -2.1  -2.87132   GGCCGCCCGCAGACA           TGCCCGCGC CGTT ACGCCTGCA            ACAAGGCCCGCAGTT  40 15
CXD94_RS11060 2268011 .. 2268039 - -10.1  -2.77994   CAGAAATTGCAACCA        TTTCCGCGCCGCC CTC GGCGGCGCGCCGA        ACCCGGCCGGCGCTA  57 38
CXD94_RS11055 NONE
CXD94_RS11050 NONE
CXD94_RS11045 2265942 .. 2265957 -  -6.2  -4.83722   AACAGCAGAATAAAA              TTGCAT AACC ATGCAA               CTTGATGCCATAGAC  86 490
CXD94_RS11035 2264519 .. 2264534 -  -8.2   -3.4247   AGAAGCTGAAGAAGA              CCACCG AAGG CGGCGG               CGCGCCGGCGCTGGA  61 343
CXD94_RS11010 2257113 .. 2257123 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS11005 2255692 .. 2255702 -  -2.4  -4.06419   TTTTGCTACAAAGAA                 CCGG CTA CCTG                 TATGCTGACACCCTG  58 432
CXD94_RS10995 NONE
CXD94_RS10990 2251923 .. 2251977 - -15.8  -2.61383   ACCGCTATTGAGAAT GGCCC-TGC--CGCGTCTTGCGCCAGC CGAT GCGGGCGCAAGACGCGAAGCTCAGGCC GTGATGATGTCCAGC  74 19
CXD94_RS10955 2242525 .. 2242544 -  -7.1  -3.42354   CAGGTCAAGGCAGAA            CTGGCCC AGGCCA AGGCCAG             CGGCCAATACACCTT  58 290
CXD94_RS10945 2240581 .. 2240602 - -14.4   -2.6155   CCTGGGAAGACCAAC           GGGCCGCC ATTATA GGCGGCCC            CGCGGCGCGGCCCGG  69 45
CXD94_RS10940 2240244 .. 2240270 -  -7.9  -5.06816   ATTGTCCAAGAAAAA        GCCG-GCGCGCC CGAT GGCGCGCTCAGT         GCGTCAGATGGCGCC  88 21
CXD94_RS10935 2239672 .. 2239683 -  -2.2  -4.05004   GCAGTAGAACAATAA                CGCGG ACG CCG-G                AGAAGGCACGGCACT  58 246
CXD94_RS10930 2239356 .. 2239371 - -11.8  -4.93547   CCAAGCAATGAAAAA              GCCCCC TGGC GGGGGC               TTTTATGGACGCGCT 100 48
CXD94_RS10925 2238498 .. 2238508 -  -3.2  -3.77808   GCGACCAGAACACAA                 GACA CCG CGTC                 GCTTGAAGATCTCGC  56 261
CXD94_RS10920 2238106 .. 2238131 - -16.9  -5.06414   GGCGCGCAACAAAAA         GCCCCACTGCC GCGA GGCAATGGGGC          TTTTTTCATGCGGCC 100 92
CXD94_RS10910 NONE
CXD94_RS10905 2235284 .. 2235310 - -14.4  -3.01924   TATCTCTGGTGAAGA         CGCGCCAGCC GGATGAG GGCCGGCGCG         ATCAACGCTTATCGA  72 78
        clpX 2233899 .. 2233933 - -19.6  -3.05819   CAGATAGCGGGAAGA     TGCAAAAAAACCCGTT ACA AACGGGTTTTCTTGCA     ATGGCGGCCGGGATC 100 46
CXD94_RS10895 2231254 .. 2231278 - -22.9  -5.45726   GATAGCCGAAAAAAA          CCGGGCCCGGA TGA TCCGGGCCCGG          TTTTGCGGGTCGCTG 100 59
CXD94_RS10885 2228758 .. 2228774 -  -7.2  -4.21827   TGAAACACGGGAAAA              CCGCCG GATCG CGGCGA              TGGCGCGCGGGCTCA  72 38
CXD94_RS10880 2227754 .. 2227774 -  -2.4  -3.16564   TTTTCATGGCATCAA            TCCGCCCG TACGC CGAGCGAC            TTGGCCAACGGCACC  42 1
CXD94_RS10875 2227293 .. 2227306 -  -2.3   -2.6563   GCGCTCAATAACGCA               GTTGC ATCA GCCAC                TCGGCCACCATCGCC  38 1
CXD94_RS10870 NONE
CXD94_RS10865 NONE
CXD94_RS10860 NONE
CXD94_RS10855 2223958 .. 2223985 - -11.3   -3.1876   AAGCCCATCCACGAA       CGCGCGC-GCCGG TCGG CCGGCAGCG-GCG        GCAATTCGGCCTTGA  64 125
CXD94_RS10840 NONE
CXD94_RS10835 NONE
CXD94_RS10830 NONE
CXD94_RS10825 2219536 .. 2219552 - -13.7  -3.65812   GGTGGGGCAATACAA              CGTGGCC GCC GGCCACG              CCGCGCTGAAGGCTC  80 47
CXD94_RS10815 2217657 .. 2217686 -    -2  -3.64703   TGCGGGGCATGTAAA       TCCCA-GCGCCGG GGTTG CCGGCGGGCGGCA       GCGGCTGCGCGTGCG  51 392
        uvrB 2212364 .. 2212378 -  -3.5  -2.70932   GCCTGTTTGTAACGA               GCGAA TTTTC TCCGC               TAATTTCCGTCTTTC  41 47
CXD94_RS10790 2211570 .. 2211585 - -11.8  -5.00616   CTCGGTCGGAAAAAA              CCGCGC AGTC GCGCGG               TTTTCTCATTTTGGG 100 96
        iscR NONE
CXD94_RS10780 NONE
        iscU NONE
        iscA NONE
        hscB 2208335 .. 2208355 -  -2.4  -3.32844   CGCGGCACCGCACAA            GCGGGTCA TCGGT TGCCGCGC            ATCGGGCCGGCCGCC  44 81
        hscA NONE
         fdx NONE
        iscX 2205817 .. 2205851 - -24.4  -3.53012   CGCGCGGCCCCGAAA     CGACAAGGGCCCCGTC CAT GACGGGGCCCTTGTCC     GGGCGGCGCGCCGGC 100 48
CXD94_RS10745 2204656 .. 2204690 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS10730 2201764 .. 2201783 - -12.1  -5.60993   CGGGCCATAAAAAAA            CCCCGCG GGGGTT CGCGGGG             CTCAAGCCAAACGCA 100 66
CXD94_RS10720 2198971 .. 2198994 -  -9.4  -3.15249   GATACCGTCGATCAA          GCCGTCGCGC GCCA GCGCGCAGGC           CGTGGTGACGTAGCG  59 364
CXD94_RS10710 2197321 .. 2197345 -  -7.2   -3.4072   GACCTGGCAGGAGAA          GGCGTCAA GAATAGCAG TTGACGCC          GGCCGGCACGAAATG  56 54
CXD94_RS10705 2196436 .. 2196449 -  -2.3  -2.70354   GGGGCTAGAAATCCA               GTTCG ATCT CGACC                GCGTCGCCCACGCGC  38 1
CXD94_RS10700 2195890 .. 2195917 - -10.5  -2.55253   ACGAATCGGAAGTGA        CCGCG-GCGCCC TTGCC GGGCGCGCGCGC        AACGGCCGTCAGGCC  57 34
CXD94_RS10695 2194756 .. 2194798 -  -7.7  -5.59357   ATGACATTAAAAAAA GGGCGGTATCCATTTGCACGC GCC GCGTGTGA--GGATGCCGCCC CGGGTTCCCGCGCCG 100 49
CXD94_RS10690 NONE
CXD94_RS10685 2191988 .. 2192006 - -17.4  -5.78622   GTACGCCAAAAAAAA             CCCGGGCC AGC GGCCCGGG             TCTGTTGCGTCGCCT 100 47
CXD94_RS10670 NONE
CXD94_RS10665 2189084 .. 2189096 -  -6.2  -3.30124   GTTGAGTTGTTATAA                GCGG ACTGA CCGC                TTTCAGCCGGGCGAA  53 28
CXD94_RS10660 2187430 .. 2187487 -  -3.1   -4.2679   GAATTTGCACGAAAA CGATCTCCTACGT-GCTGCGCGGCGCCA TGG CGGCGCCGCGCGGCGACTCAGTTCTTGG ATATTCCCCAGAATA  63 15
CXD94_RS10655 NONE
CXD94_RS10650 NONE
CXD94_RS10645 NONE
CXD94_RS10640 2182618 .. 2182636 - -17.4    -5.252   CATGGCCATAAAAAA             GGCCGGCC AGC GGCCGGCC             CGCAGCGCGTCGCGC 100 42
CXD94_RS10630 NONE
CXD94_RS10625 2178871 .. 2178891 -  -3.2  -2.62616   TCAGGGCCGATACCA           GCGCTGGCA GGAA TGCCC-CGC            TAGGAACGGGAAGTC  39 25
CXD94_RS10620 2178030 .. 2178046 -  -7.9  -3.63991   CACCATGTCGAAGAA              CAGCGCC TGC AGCGCCG              TGCGCCGTTGCGCGG  63 398
CXD94_RS10610 2175557 .. 2175582 -    -6  -4.15044   TCCTGCGTGAAGAAA         CGCCTGCCGA GGCTTA TTGGCTGGCG          TAGAAACTGACCAAT  66 13
CXD94_RS10605 NONE
CXD94_RS10600 2174081 .. 2174112 -  -8.7  -2.94218   ATTTTTGATTATAGA     GGGTCGGCAG-GCCG ATGC CAGCGCCGCCG-CCC      TACTCCTTGCCCGGA  54 25
        alaS NONE
CXD94_RS10590 2171132 .. 2171159 - -21.4  -3.01791   ACGCTCGCGCCAAGA        CAAACGGCCCGC TTGC GCGGGCCGTTTG         CTTGCCGGCAGGCGC 100 41
CXD94_RS10580 2169831 .. 2169849 - -10.2  -4.55295   TTGCGGACAAAGAAA             GCGCTGGC ATA GGCAGCGC             TTTCAAGAAATGCAG  89 139
        rimM NONE
        trmD 2168014 .. 2168026 -  -9.1  -4.08216   CGAGTCGGCCGAAAA                CAGCG TGG CGCTG                CGCTGCGGACTGGCC  72 400
CXD94_RS10530 2161569 .. 2161595 -   -15  -3.17075   GGCGTCTGAACGCAA         GGGCCCCCCGGC GCG GCCGGGGGTTCC         TGCCCATGGCAAGCG  76 85
CXD94_RS10520 NONE
        rlmN NONE
CXD94_RS10510 NONE
CXD94_RS10505 NONE
CXD94_RS10500 NONE
CXD94_RS10495 NONE
        bamB NONE
         der NONE
CXD94_RS10480 2149240 .. 2149254 -  -9.2  -2.52464   GTTTGTTTTAAGTGA               CGGCAC AGT GCGCCG               AAATCAGTACTCTAC  54 118
CXD94_RS10475 2148915 .. 2148944 - -17.2  -4.36595   GAGCCAAAGCGAAAA       TGCCCGCCGGCGC TGGCC GCGC-GGCGGGCA       ATCAAGGGTAATGCT 100 53
        hflX NONE
        hflK NONE
        hflC 2145464 .. 2145493 - -19.3  -4.98531   TGCCCAAACGAAAAA       CGGCTGAGAGGGC GTAA GCCCGCTCAGCCG        TATGCGGAATGTTTT 100 122
CXD94_RS10455 2144188 .. 2144198 -  -6.8  -2.55896   TTTACGAATCAATAT                 CGAG TTT CTCG                 GGAAATCCGGAAATC  47 76
CXD94_RS10450 2142839 .. 2142872 - -18.1   -3.9461   CCTGGCGAATAATAA     CCG-AGGCCGCGCCAC AAC GGGGCGCGGCCCGCGG     CGCCCTACCCCTTGA 100 30
CXD94_RS10445 2142044 .. 2142054 -  -3.2  -3.23452   ATGGCGACAAGCTAA                 GACA ACT TGCC                 GCATCAGTAGCACAG  46 195
CXD94_RS10440 2141700 .. 2141729 -  -6.5  -3.16055   CAAATCCTGGATGAA       TGATTCTGGAATC AATA GATTCGGGAATCA        GGCATCAATACAGGC  51 30
CXD94_RS10435 2139424 .. 2139449 -  -6.1  -4.24002   CCGCAAACCGCAAAA         GGCCATGCGCCG GCC CGGCACATG-CA         TGCCGCCACCCGCCA  70 260
        rpoD NONE
CXD94_RS10425 2136592 .. 2136617 - -16.9  -5.14626   ACCACCAAAACAAAA         CGGGCCTCGGA TTGC TCCGAGACCCG          CATGTTTACTTGGTA 100 36
CXD94_RS10415 2134824 .. 2134840 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CXD94_RS10395 2132045 .. 2132086 -  -6.3  -3.02511   GCTACCGCCTCAAGA CCTGAACGGCGCGCGCCGGC TCA GCCGGCCGGCGAC-TGCTGG CGCACCCACTGCATG  49 4
CXD94_RS10325 2121146 .. 2121158 -  -3.3  -2.52516   TTGCCGAGGACGAAT                TGCAG GCG CTGCT                GGAGGCGGTGCGGCA  39 62
        bioF NONE
CXD94_RS10310 NONE
        bioD NONE
CXD94_RS10300 2115766 .. 2115776 -  -8.2  -3.53444   CCAGGGTTTCGGAAA                 GGCC CAT GGCC                 ACGGGCGCGGTGACC  62 446
CXD94_RS10285 2114256 .. 2114295 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD94_RS10270 2109594 .. 2109608 -  -5.6  -3.78934   CCCGGGTTAGAAGAA               GCCCAG GGC CTTGGC               GCTGTAGCTCACCAG  60 2
CXD94_RS10255 2106338 .. 2106348 -  -8.2  -3.33162   CAGCGTATTCGAGAA                 CGGC AAT GCCG                 ACGCCACGTTGACCA  59 280
CXD94_RS10245 2104340 .. 2104356 -  -9.3  -2.75481   TGCCAATTCCAACCA              GGGGGCC GCG GGGCCCC              TGCCACCCAGGAGCA  55 392
CXD94_RS10235 2102991 .. 2103017 - -13.6   -3.7795   CCAAAGCCCAGCAAA         TGGCCGCCGGCG CGG CGCTCGCGGCCA         AGCGCGGCGAATCCA  82 280
CXD94_RS10225 2101978 .. 2102005 - -17.8  -3.02144   TTACCGTCGCCAACA        TCGCGGT-GGCGC TGC GCGCCTACCGCGA        AACCACGCTGCGCGA  82 361
CXD94_RS10215 NONE
CXD94_RS10210 2100266 .. 2100279 -  -4.5  -3.02144   GCAGGCGCTCGAAGA               GGTCA TCAC CGACC                TGCAGCGCCGCGGCG  46 208
CXD94_RS10190 2095901 .. 2095911 -  -3.2  -2.78816   CCAGCCCCTACGACA                 GCAC GGT GTAC                 GACCCGCCCAGCTAC  40 329
CXD94_RS10160 2090917 .. 2090932 -  -3.2  -2.52516   GCGTCGACCAGCAAG              GCCG GGCGATGG CGGC               GATCAATATCCGCTG  39 120
CXD94_RS10140 NONE
CXD94_RS10135 2086985 .. 2087013 - -10.2  -3.52073   GCTGCAATACCAGAA        GCAGCTGCGCCT GCACG AGGCGCACCGGC        TGATGGTGGCCGAAA  65 177
CXD94_RS10105 2080852 .. 2080876 -  -2.7  -4.07568   GGCGCCGGCGCAAAA          CAGTGTTGCAG CCG CCGCAATGCCG          TGCCCGCTGGTACGG  59 49
CXD94_RS10100 2079555 .. 2079601 -  -9.6  -3.68222   CGCCAATTCGAACAA GTCGCACGCGCGCCAGGTCG-ACG TGG CGCGCGACCTGGC-C-CG-GCAAC TGGCCGGCGGCGACC  68 224
CXD94_RS10085 2076662 .. 2076703 - -14.3  -3.19513   AGAACGGCAACCTAA CCCCCGGGTGCCTGTCCCC ACAG GGGGACTGGCACCCGCCAA  TTGCTTGCCTGTCCC  73 126
CXD94_RS10075 2074793 .. 2074803 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS10065 2072352 .. 2072380 -  -8.1  -4.10552   TTCCACTAAAGCAAA        TCCGACATGGC ACAGGCG GCCAAGCCGGA        CAACGGCACGCCGGC  69 395
CXD94_RS10055 NONE
CXD94_RS10050 NONE
CXD94_RS10045 NONE
CXD94_RS10040 2068507 .. 2068534 -   -14  -3.02144   GCAGGCCGCCGAACA        CGCCCGTCGGCC GCCA GGCCGCCGCGCG         CGCCAGCGCCGCGTC  72 225
CXD94_RS10030 2066357 .. 2066384 - -10.6   -4.2535   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC  89 104
CXD94_RS09995 2061050 .. 2061084 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS09960 NONE
CXD94_RS09955 2051705 .. 2051754 -  -5.6  -3.29144   GGATGGTGTTGATAA TTGTGCGCGGCCC--CCGCGGGCCG GCG CGGCCCGGTGTCAAGCCGCGC-CGA GTATTGTGATCGAAC  51 12
CXD94_RS09950 NONE
CXD94_RS09945 2049384 .. 2049400 -  -3.6  -3.14344   GAGGTGCTGCACGAA              TGGGGC CTGGC GCCCGA              GCGCGTGGCCGGCGC  45 102
CXD94_RS09910 NONE
CXD94_RS09905 2042093 .. 2042105 -  -3.3  -3.65046   GCCGGAGGGGAAGAA                CAGCG GGG CGATG                GCGATCAGCGCGGCC  53 82
CXD94_RS09895 2040035 .. 2040089 - -12.1  -3.01712   GGCTGGCGGGCAACA GCCACGTGTCGGCCGCGGCCTTGATGG GCG CCACCACGGCGGCGGCC-ATGC-TGGC CGGCGGCCCGGCTTT  66 277
        queF 2036888 .. 2036914 -  -7.9  -2.52464   TGCTGGCGCAATGGA         TCGCGATGCAG GCGCG CCGCACCGCGC         TGAACGCGGCTATTG  49 35
CXD94_RS09815 2020761 .. 2020800 - -11.3  -3.28712   CCTGGGGCTGGAGAA  CCGCCTGGCCGACCGCA TCGGCC TGCTGTCGGGCGGGCAG   CGCCAGGCGGTCAGC  66 387
CXD94_RS09725 2001724 .. 2001743 -  -3.4  -2.82595   TTGAACCACCGAAAC            GCGTGCGG CAAG CCGTAAGC             CACCTCAGGACCTGT  41 175
CXD94_RS09720 NONE
        rpmG 2000993 .. 2001014 - -18.7  -4.86731   CCTTGCCAAATAAAA           CGGCCCCGC CCTG GCGGGGCCG            TTCACCATGGCGCGC 100 68
CXD94_RS09690 1996117 .. 1996147 - -22.6  -3.85698   TCGCCGCCGCATAAA       CGAAGAGCCCGCCG GTG CGGCGGGCTCTGCG       GTTTGACCTGAGACG 100 49
CXD94_RS09685 NONE
CXD94_RS09680 1994277 .. 1994317 -  -2.4  -5.00884   ACTCGTGCGAAAAAA TAGGTAACGGACCGCGCCC GGCA GGGCGCGGGCGGTCAAA-A  CCATCGATTATAGGA  79 45
CXD94_RS09675 NONE
CXD94_RS09670 NONE
CXD94_RS09665 NONE
CXD94_RS09660 NONE
CXD94_RS09655 1988007 .. 1988017 -  -2.4  -3.01712   GCGTTTCCGGGAAGA                 CCTG TGC CTGG                 CGGCGGGCGCCGATA  41 104
CXD94_RS09645 NONE
CXD94_RS09640 NONE
CXD94_RS09635 1984419 .. 1984443 - -13.6  -4.09685   TTTTATTGCTCAAAA         CCCCGC-AGCC TCAC GGCTCGCGGGG          TTTTGTTTTTGGGGG  85 355
CXD94_RS09600 1976638 .. 1976656 -  -8.1  -3.20348   GCGAGTAATAGGCAA             GCGCTGC GAACA GCAGCAC             CCAGATGGCGAAGGT  54 285
CXD94_RS09585 NONE
CXD94_RS09580 NONE
CXD94_RS09575 1971393 .. 1971407 -   -10  -3.33696   GGCTTTTCCAAGCAA               TTCGCC AGC GGCGAA               ACCAGCGGCTACGCC  63 336
CXD94_RS09550 1968065 .. 1968085 -  -4.7  -3.62046   CCATTCGCCCAAGAA           CCTGGCCA TGGCGC TGGCC-GG            CGAGGCCGGCGAGCT  54 285
        acnB 1964496 .. 1964515 - -16.4  -4.91852   CGCAGCAAAAAGAAA            GGCCCGCC TTGC GGCGGGCC             TTTGTCATGGCCGAA 100 48
CXD94_RS09530 NONE
CXD94_RS09525 1963226 .. 1963236 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD94_RS09520 1962088 .. 1962100 -  -4.8  -4.07568   GGGGGCGCCTGAAAA                CTGG GACTA CCAG                GCTGGCAGCCTGACC  63 147
CXD94_RS09500 1958062 .. 1958082 -  -3.8  -4.09864   ATCGATGCGTCAAAA            GTTCCCGC GCGAG GCGGGCGC            CGGGCCGACGTGCTC  61 108
        acnA 1955165 .. 1955188 - -19.6  -5.26875   CGTCCAACGAAAAAA          CCCTCCGGCC AGCA GGCCGGAGGG           TTCGGGTCGCGCAGG 100 59
CXD94_RS09485 1952939 .. 1952959 -    -4  -3.79687   ACGCGGCAGAAAATA           TCGGCG-CGC ATG GCGGCGC-GA           TCCGGTCAGTGGAAC  57 31
        earP 1951786 .. 1951802 -  -2.2  -2.64274   AGGCTGTCAAAGTGA              GGCC TTGAGCACC GGCC              GATCCGGGCAAAGCA  38 60
         efp 1951087 .. 1951106 - -16.4  -5.75342   CCGGGGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG 100 56
CXD94_RS09370 1930925 .. 1930937 -  -5.5   -3.2614   GATGCCCCATACCAA                GCACA AAC CGTGC                CAGCTTTTTTCAAGA  51 256
CXD94_RS09350 1927692 .. 1927745 -  -8.8  -2.82623   CGGGGCGGAGAACGA GTAGGCGGGGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCG--TGCCAACCGTC AATCGTTGACGAAGT  54 24
CXD94_RS09310 1916425 .. 1916467 - -10.5  -3.40403   GGGGCTGGACGACAA GCAGGTGATGCAGGCCGCCC ATGC GCGCGGCGTGC-TCACGCGC GCTGTCGCGCTACTA  65 171
CXD94_RS09300 1913654 .. 1913697 -   -34  -3.06815   ATCCTCCTCAATACA GACGCGGGATGGTGGCGCCC ATGG GGGCGCCCCCATCCCGCGTC GAACGATCCAAACAA 100 41
CXD94_RS09295 1912119 .. 1912142 -   -21  -5.47399   GCAAGGCGAAAAAAA          GGCCGGCGCC CGAA GGCGCCGGCC           TTGCTTGCCCGCGGG 100 47
CXD94_RS09290 1911023 .. 1911053 -  -5.4  -2.71712   TGCTCGCCCTGAAAG      TCAGCCGGC-CCT GCGACG AGGTGCTGGCCGA       GGTCGTGCCCTAGGG  45 107
        pgaA NONE
        pgaB NONE
        pgaC NONE
CXD94_RS09220 1894671 .. 1894685 -  -5.6   -4.1891   CTGGCCGAACAGAAA               CTGTCC AGC GGGCAG               GCCGACCTGGTGGCG  66 180
CXD94_RS09205 NONE
CXD94_RS09200 NONE
CXD94_RS09195 1891878 .. 1891888 -  -2.4  -2.54523   GCAGACTGGAATGCA                 TGGG TTA CCCC                 TGGAGGTGGGTTTTC  38 19
CXD94_RS09190 NONE
CXD94_RS09185 NONE
CXD94_RS09180 NONE
CXD94_RS09175 NONE
CXD94_RS09170 1886249 .. 1886276 - -18.6  -3.11687   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC  90 189
CXD94_RS09135 1879303 .. 1879318 -  -3.2  -4.07568   CCGCGCGGTCGAAAA              GGGC GAGTTGCG GCCC               GATACCCCGGTGGAA  60 198
CXD94_RS09080 1870196 .. 1870217 - -14.5  -4.93696   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 209
CXD94_RS09040 NONE
CXD94_RS09035 1861819 .. 1861829 -  -2.4  -3.06796   CGCCAGCTTATTCAA                 GGAC TTC GGCC                 TTTTCGATGATCACG  41 7
CXD94_RS09030 1860838 .. 1860863 - -19.1  -4.55798   TACGCCAAATGAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 204
CXD94_RS09010 1856476 .. 1856505 - -22.3  -2.62616   CGATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACAC        TGGCCGCCGGAGTGG 100 87
CXD94_RS09000 1854252 .. 1854268 -  -5.7  -3.09803   CAAGGCCAGCGAATA              CCGCGAC AAC GGCACGG              TGGTCAATGTGCGCG  48 194
CXD94_RS08985 1851208 .. 1851240 -  -8.5  -3.61715   CATCCTGTCGAACAA    CCG-CCGCCATGCGCC GTTC GGC-C-TGGCGGGCGG     CGAGGCCGGGGCGAT  63 184
CXD94_RS08965 NONE
CXD94_RS08960 NONE
CXD94_RS08955 1843707 .. 1843718 -  -7.2  -3.27923   GGTGAACAGCAGCAA                GGCC ACCA GGCC                 GCTGGCCACCAGCGC  54 111
CXD94_RS08945 NONE
CXD94_RS08940 1840440 .. 1840459 -  -2.7  -3.58343   CCGACGAGCCGGAAA            CCGCGGC GAAGAT GGCGCAG             CCGATGACGTTGGTG  49 332
CXD94_RS08900 NONE
CXD94_RS08895 1816445 .. 1816462 -  -3.4  -3.73775   CCTATGGCCAGCAAA             GCCTGCA TAGCC TGC-GGC             GGCTGCACCGGGCCG  55 419
CXD94_RS08845 1809403 .. 1809415 -  -3.3  -3.13371   CAGGCCACTAATATA                CCGAA GCG CCCGG                CGAATAAAAATAGCG  44 76
CXD94_RS08840 1808507 .. 1808522 -  -7.5  -3.39895   GTCGGGAGGAACGAA              GCCGG AAACCG CCGGC               GCAAGCGGGCCCAGG  59 133
CXD94_RS08835 NONE
CXD94_RS08830 NONE
CXD94_RS08825 NONE
CXD94_RS08820 NONE
CXD94_RS08815 NONE
CXD94_RS08810 1801806 .. 1801826 - -10.4  -2.70932   GGGCGGGGTGAATCA           GCGCGGCGC GTTG GCGC-GCGC            CACCATGGCGTCGAG  57 2
CXD94_RS08745 1788923 .. 1788933 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS08740 NONE
CXD94_RS08715 1781457 .. 1781487 -  -5.2  -3.14602   TCTAGTCGACCAAGA       CCGGACGCGCTCCC TAG GGGAGCAGGCGCGC       CTTGACCTGCTGCGA  49 8
CXD94_RS08680 1773526 .. 1773536 -  -8.2  -3.21747   GGATGGGAGGAGTAA                 CGCG CTG CGCG                 GGCGCGTCGCGACGC  58 106
CXD94_RS08675 NONE
CXD94_RS08670 1770941 .. 1770955 -  -2.7  -3.75169   GACGACTCCATGAAA               CGGGG ACCGG CCACG               CGGGGCAGGGATTCT  53 39
CXD94_RS08665 1770053 .. 1770087 - -14.9  -3.63515   GCCCATCGGCAAGAA     GGTGGGCCTGGCCAC CGAAC GCGGCATGGCCCACC     TCGTCATCGACGAGC  83 64
CXD94_RS08590 1756267 .. 1756288 -  -3.6  -3.53012   CCCTGGCCGCCGAAA           CCCGCGAC CAGGGC ATCGCGGC            CAACGCGGTGCTGCC  49 205
CXD94_RS08570 NONE
CXD94_RS08565 1751313 .. 1751331 -  -6.7  -3.21416   CATGGCGACGATCAA            CGACCGCA GCGT TGCGG-CG             TCGGGCGGCGTCTTC  52 168
        arsH 1750073 .. 1750083 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 255
CXD94_RS08545 1748607 .. 1748641 - -17.1  -2.66316   CGTCCTACGACATGA    CGCCGCC-GGCCGCCA AGGA CGGCGGCCAGGAGGCG     CCGTGAGCGACGCCC  80 453
CXD94_RS08525 1745202 .. 1745219 -  -4.8  -3.16742   CTCAAGCCGGAGTAA             GGCCGCC GCTCA GGCG-CC             GGGAAACCGCATGGG  47 17
CXD94_RS08505 1741484 .. 1741495 -  -5.8  -2.62184   TGCCCGCTCAGACGA                TGCG CGTG CGCA                 AGGTGCCGATCTGCG  44 6
CXD94_RS08500 NONE
CXD94_RS08495 1739435 .. 1739445 -  -6.8  -2.94912   CCTTGAAGTTATAGA                 GCAG GTT CTGC                 CTGGATGCGCGGCGC  51 59
CXD94_RS08490 NONE
CXD94_RS08485 1737171 .. 1737182 -  -7.2  -3.14132   CCTGGTGCGCACCAA                CCCG CGCA CGGG                 CCGGCGCTCGCTCTA  53 253
CXD94_RS08475 1735594 .. 1735612 - -10.4  -3.68073   CAGTTCATGGAAGAA             TATACGTC ATT GACGTATA             TTTCAATCGCCAGCA  70 109
CXD94_RS08465 1735037 .. 1735062 - -13.3  -2.79831   GCAACCGCCAGCACA         CCGCCAGCG TGGTGCTG CGCTGGCGG          TTCTGAATCGCAGCT  67 45
CXD94_RS08455 NONE
CXD94_RS08450 NONE
CXD94_RS08440 1726865 .. 1726913 -  -7.3  -2.84192   GACATGAGCAGTACA CCCTTGCGGGCCGGGCGCGCGGCG GCGC CGCCGCGCG-CCGAAGCGC--GGC CGCTGGCCGGACTGT  50 439
CXD94_RS08385 1715255 .. 1715268 -  -9.5   -2.5092   GAATATTTTATGAAT               GCGCG CGGC CGCGC                GGCGCGGCCTGGAAG  54 61
CXD94_RS08380 NONE
CXD94_RS08375 1713212 .. 1713237 -  -9.7  -3.24232   CTCCCTTGAAAGACA         CGCTCCTGCCGA TTC TAGGCAGG-GCG         GCGGGCGGATCGGCC  61 120
CXD94_RS08370 1712360 .. 1712370 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS08365 1711329 .. 1711340 -  -5.8  -3.01712   GGCTCGCGCCGAAGA                TCGC GCCG GCGA                 CCGAGCCGACGCCGC  47 41
CXD94_RS08355 NONE
CXD94_RS08350 1709457 .. 1709467 -  -3.2  -4.09685   TCGTACGGGCCAAAA                 CACC TCC GATG                 ACGCGAGTGCCGCGA  59 252
CXD94_RS08345 1708528 .. 1708549 -  -8.7  -3.30771   CGAGAGCGTGCAGAA           CGCCATCGAC CAG GCCGA-GGCG           GTGGCCGACGATATG  58 328
CXD94_RS08335 1706238 .. 1706256 - -12.4  -3.57144   CGCTGCATTGGGAAA             GCGTCGAC GCG GCCGACGC             CGCGGCGGTGCTGGA  74 344
CXD94_RS08265 NONE
CXD94_RS08260 1686899 .. 1686934 -    -9  -4.70266   AACAGCAGGGAAAAA   GA-GGC-CCCGCGCCG TGCCCG CCGCGCGGGCGCCGTC    GTGCTGGACGGGCTT  86 94
CXD94_RS08255 1684578 .. 1684599 - -15.9  -4.77165   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 306
CXD94_RS08235 1681135 .. 1681153 - -10.2  -2.62184   CCTCGCTGGAGACCA             TCCGCCAC ATG GTGGCGGC             CGGGATCGGGGTGAC  55 278
CXD94_RS08200 1672137 .. 1672195 - -12.3  -4.06419   TTCGTGGACAAATAA GGCCGTGCGCCGCCA-GGAAAAGCCGCC TTCG GGCGGTTTTTCTTTGGCCGCGCGCCGGC GCCGTTCATGCGTCG  83 31
CXD94_RS08190 1669880 .. 1669907 - -15.6  -4.59773   TGCTACGGGGAAAAA        TGCAAAGCGGCC GGAT GGCCGCTTTGCC         GACAAACAAGGCAGT 100 107
CXD94_RS08185 NONE
CXD94_RS08180 1667351 .. 1667361 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS08175 1666028 .. 1666039 -  -2.2  -3.21099   CCGCCCGAGCACGAA                GAGCG CGC CGC-C                TACCTGGTCGAGGGG  43 333
CXD94_RS08160 1663220 .. 1663273 - -19.6  -3.01712   CCGGGCGGTCGAACA CCAGCAGGCGGCGGCC-CGGCAGGCCG AAC CGG-CTGCCGCGGCTGCCG-CGGCCGG GACGGCGCCGGCCCC  87 294
CXD94_RS08125 1654347 .. 1654375 - -11.6  -2.65298   GCCACGCAGGAGAAT        GCCGCCATGGCC GAGCA GACCGCGGCGGC        GGCGGCCTCGCTGGA  61 105
CXD94_RS08110 1650176 .. 1650211 - -20.4  -2.84602   GGCACTGCAGTAAAC    CCGCGTGCCTGTCCCC GCAC GGGGACTGGCACGCGC     TGAATCCGGGGTGCC 100 154
CXD94_RS08100 1648150 .. 1648165 -  -6.2  -3.07355   TTGAAACAACAACGA              CTGAAA AGGA TTTCAG               GGGCACCGGTCTATG  49 230
CXD94_RS08095 NONE
CXD94_RS08090 NONE
CXD94_RS08085 1647290 .. 1647302 -  -9.1  -3.28712   GTGCGTGTCCGACAA                GCCGT TGC ACGGC                GAGCTCAAATTGCCC  59 243
CXD94_RS08075 1644630 .. 1644651 -  -7.9  -3.61398   TGTGCTGTTCAACAA           TGCCGGGCGC GGC GCGCC-GGCC           GTGCCCATCGAGGAG  60 501
CXD94_RS08065 NONE
CXD94_RS08060 1642457 .. 1642467 -  -8.2  -4.09685   CCCGAGGGCGGAAAA                 GCCC CCG GGGC                 CAGCAAGCCCTCGCG  72 45
CXD94_RS08055 NONE
CXD94_RS08050 NONE
CXD94_RS08045 1638861 .. 1638887 - -13.6  -3.14132   TCGGGTGGCCAGCAA         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCCATCAAGCCCAAG  72 308
CXD94_RS08015 NONE
        bamC 1632819 .. 1632842 - -18.2  -5.78622   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 66
CXD94_RS07990 1627232 .. 1627260 - -20.3  -3.61398   CTGCGTGTGCAACAA        CTGCGCAACGCGC GCC GCGCGCCGCGCAG        GCCGGCATCAGTCGT 100 33
CXD94_RS07980 NONE
CXD94_RS07975 NONE
CXD94_RS07970 1622465 .. 1622479 -  -4.2  -3.14931   GCGATTCGGTATCAA               TCCATG CAG CATGGC               CAAACACTCCAAACG  45 52
CXD94_RS07965 NONE
CXD94_RS07960 NONE
CXD94_RS07955 NONE
CXD94_RS07950 1618765 .. 1618790 -  -8.2  -3.40403   GCCGCTGGACGACAA         GGCGGCCGCCG ATGCG CTGCGGC-GCC         TGCGCGGCCTGGACG  61 483
CXD94_RS07940 1617658 .. 1617689 - -14.6  -3.02829   CAGAGGCGGGTAAGA      TCGAATGGCTGTAT GGGC ATACAGCCATTCGC       GCGCCTGGGGCGCAG  74 50
CXD94_RS07935 NONE
CXD94_RS07930 1615977 .. 1616011 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 264
CXD94_RS07880 1602269 .. 1602301 -   -20  -2.64616   CGGGGACGGAGACGA     CGGTGTGCCTGTCCC AGCG GGGACAGGCAC-CCG      CACGGGCAGGCGCCT  95 77
CXD94_RS07875 1600665 .. 1600699 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 201
CXD94_RS07840 1594393 .. 1594434 -  -2.1  -4.01411   TACGAAAAACTCAAA TCCGGATCGTGGATATGCGG GCG CGGCATCGCCGCG-TCCGCA CGCTTACTGTGCCTT  56 29
CXD94_RS07835 1592961 .. 1592983 -  -9.8  -3.28712   CTGGGTGGTGGACAA           CCAGCACGGC GAA ACCGTGCTCG           AACTCGACGCCACCA  63 207
CXD94_RS07750 1579266 .. 1579296 - -19.6  -3.14344   CAGGTGGTGCAGTAA       GGCGGCGACCGGCG CGG CGCCCGGCGCCGCC       CGCCCGCATGGAAAA 100 79
CXD94_RS07735 1576062 .. 1576105 -  -9.4   -3.0127   CGAGGGAATTACAGA TCGCCTGAGCGAGGCAGCGG CGCT CCCCTGCCTGGGTGAGGCGC GCGTCCCCGGTTTCA  57 38
CXD94_RS07730 1574659 .. 1574707 -  -3.5  -3.39449   TCCGAGCAACATGAA GGGCTC-CTTCGCGCGCGCCGC GGCAAG GCCGCGCGCGCGCCGTGCGTCG TGCGCCTCAGCTGGT  49 32
CXD94_RS07725 NONE
CXD94_RS07720 NONE
CXD94_RS07715 1572513 .. 1572533 -  -3.3  -3.35046   GCAGTCTCGGAAAGA            CGGATAT TCCCAAT ATACCCG            TTGCCCGGCGGTCCG  46 59
CXD94_RS07710 1571669 .. 1571703 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 411
CXD94_RS07665 1564535 .. 1564552 -  -8.3  -4.13767   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT  72 151
CXD94_RS07630 NONE
CXD94_RS07625 1556365 .. 1556375 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 383
CXD94_RS07615 1555247 .. 1555281 - -12.9  -2.61582   CAGGGCATTCAGAAG    CG-CGGACCTGGCCTT GTAC AAGGCCAAGGCCGACG     GGCGCAATCGTGTCC  62 105
CXD94_RS07510 1532627 .. 1532683 - -11.5  -3.65812   GGCTGCCGAACAGAA GCCCGGCCAGTAGCCCGGGCGGCAAGCC GCGC GGCGT-CCGGCCGC-CT-CAGGCCGGGC GCGTGCGCCGGACCT  75 15
        mobA NONE
CXD94_RS07445 NONE
        mobB 1519038 .. 1519050 -  -3.3  -4.36914   CGCTGTGGCAGAAAA                TGGGC GCG GCCGA                CGGCAATGCGCCGCC  67 162
CXD94_RS07410 NONE
CXD94_RS07405 NONE
CXD94_RS07400 NONE
CXD94_RS07395 1509788 .. 1509812 - -11.3  -3.57792   CGACGTATTGCGAAA          GCCTGCGGCTG GAG CTGGCGCAGGC          CGGCGTGCGGGTGGT  70 398
         tal 1503522 .. 1503532 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS07370 1502473 .. 1502483 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS07360 1501186 .. 1501199 -  -4.5  -3.28924   CATCTCGGTGCACAA               CCGCGC CCA GC-CGG               TGCAGGCGGCGCTGG  49 295
        smpB 1494393 .. 1494406 -  -5.9  -2.71364   GTACGCGGCCAAGCA               GGCCG GCCG CGACC                GCATCAGGAATCGCG  47 29
CXD94_RS07300 1490958 .. 1490979 -  -8.6  -4.56597   CGGCGTGCTGAAAAA           GCGCGAGG TCAACG CCGCGCGC            AACGCCGACGTCAAC  83 258
CXD94_RS07290 1489862 .. 1489882 -   -14  -4.77036   CGGCAGCAGGAAAAA            GCCTCGCC CTTGC GGCGAGGC            TTTTTTTCGCCGGGC 100 52
CXD94_RS07280 1486213 .. 1486223 -  -2.4  -3.16492   GCATATCCACGAACA                 CCTG GAC CTGG                 AGGCAGTGCTGCCGC  43 291
         map 1469318 .. 1469335 -  -5.5  -2.87132   GGCGGGGGTCAGAGA             GCCGG GATTTCGA CCGGC              CGTGTCACGAAGGCC  46 1
CXD94_RS07190 1466274 .. 1466289 -  -7.5  -3.30124   GGTGAGCGGGTAGAA              GGCGC GCGCCT GCGCC               ATCTCGGGCGTGAAC  56 420
CXD94_RS07180 1465354 .. 1465410 - -31.9  -2.71364   CTACGCGGCCAACGA CGCCTGACCGGCGCGGCGCGGCCGGCTT GCGC AAGCCGGCCGCGC-G-GCCG-TCAGGCG TTGCGCCGCAACGCC 100 19
CXD94_RS07155 1460371 .. 1460383 -  -3.3  -4.57569   CGATTCTGTCAAAAA                TTGGC GCC GCCTA                TTGGCCGGGTAAAGG  71 117
CXD94_RS07150 NONE
        fliS 1458511 .. 1458536 -  -3.1  -4.82901   GCGGCTGGACAAAAA         GTGCCTTCCTG GTTT CAGGCCGGAAC          GGCAGGCGCAGGGTG  75 14
CXD94_RS07140 NONE
CXD94_RS07135 NONE
CXD94_RS07130 NONE
CXD94_RS07125 NONE
CXD94_RS07120 1455827 .. 1455876 - -11.4  -3.53444   GCATGCTGTCGCAAA TGCGCGCCGTGGTGCGCGCCG-CGC AAA GCGGCGGCGC-CACCGAGGC-CGAA CTGGCGCCTGGGCCG  69 276
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1450011 .. 1450062 -  -4.4  -3.30441   CAGCACTTGCGAGAA GCTGGGACCCTTGCCG-GC--GGCGGC CGG GCCGCCTTGCGCGGCC-GGA-CCCGGC GCAGGCGTCAGGGCG  49 96
CXD94_RS07080 1447681 .. 1447698 - -10.5  -2.52464   TTCTGCCGCAATTCA             CGCCCGC GCTG GCAGGCG              AAAAACAGGGCGAAA  56 308
        fliL NONE
        fliM NONE
        fliN 1445526 .. 1445540 -  -5.6  -3.14564   GGATTCGGTCATGAA               GCGGCT TTT AGCGGC               GACTGTTCAAGCGGT  49 18
        fliO NONE
CXD94_RS07050 1444391 .. 1444403 -  -3.3  -2.58544   CGCTATTGGTAGAAG                CTCTG GGC CAGCG                AGCCGAGCAGCAGGT  39 0
CXD94_RS07045 1444069 .. 1444084 -  -5.4  -2.78712   TGGTGAACGCAATCA              TGG-CGC GGC GCGGCCA              GGCGCGTTCAGGACA  45 33
        fliR 1443135 .. 1443153 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 153
        flgA 1424869 .. 1424884 -  -5.4  -2.79004   GGATCTTCAAAATAT              TCTCCGC TGC GCGG-GA              CCGGCCCGATGGGGG  45 131
        flgM NONE
CXD94_RS06950 1423991 .. 1424007 -  -9.3  -3.01712   CGGGCGCGCGCAAGA              CGCCCGC GCG GCTGGCG              CCCGCGGCCTTGATG  57 91
CXD94_RS06930 1416960 .. 1417014 -  -7.7  -5.35365   AAAACATAAGAAAAA GCAATATAC-CCGGGAGCCTGTCCCC GAAC GGGGACTGGCTCCCGCTGACTTCTAC TTGCCAGCGCCCCAG 100 102
CXD94_RS06925 NONE
CXD94_RS06920 NONE
CXD94_RS06915 1414497 .. 1414507 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS06910 1413338 .. 1413369 -  -5.7  -3.30214   AATCGACTACATCAA      CGGCGCCATCC-CC AGGCA GGCGGCCCGCGCCG      GCATCCAGGCCCCGG  52 149
        leuD NONE
CXD94_RS06880 1406660 .. 1406670 -  -8.2  -2.57132   GCGGTGGCCTACAAG                 GGCG CGG CGCC                 GGCGCTGGTGGCGCT  51 446
CXD94_RS06850 1399677 .. 1399687 -  -2.4  -3.68351   GGGCCATGATCGAAA                 CGCC GCT GGCC                 ATCCTCAATATCGGC  53 513
CXD94_RS06835 NONE
CXD94_RS06830 1393916 .. 1393948 -  -5.4   -3.4072   CATCCGCGACGACAA     CGC-GCTGACCGCCC GCCT GGGCGCCCGGCTGCA      GGGCGAGTACGCGGC  52 281
CXD94_RS06805 NONE
        clsB 1387596 .. 1387642 -  -9.8  -3.19602   CCTGGTACAGCAATA CCCCGACGACGGCCAGGCCGAC GAT GCCGGCCAGCCAGGCGCCCAGG CGGCGCCGGCGGTGT  62 60
CXD94_RS06780 NONE
CXD94_RS06775 NONE
CXD94_RS06770 1383422 .. 1383444 -  -8.3  -2.87132   GCTGTCGTCCACATA           GCGCAGCGC GGCGG GCGCCGCGG           GGCTCACGAGCGGCG  54 29
        treS NONE
        glgB NONE
        glgX NONE
        treZ 1370006 .. 1370057 - -10.5  -3.04144   CGGGCACGCGCAACA TCCCGCCGGCGCGCGCGGTCAGC ATGGCG GGAGGCCGGGCGCGCCAGCGCGC CAGGGTGTCGGCGGT  60 188
        treY 1366127 .. 1366166 - -15.6  -3.14132   GCTGCCCGGCATGAA  CGGCCAC-GCGCTGGCGCA GGC CGCGCGGGCGCTGCGGCCG  GCCCTGCGCATCATT  78 169
        ptsJ 1360144 .. 1360160 -  -4.3  -3.09908   CGTTCGGAAAATAAC              CGCCCCA TTA TGGGAAG              TCGCCTGGTTGATGT  47 55
CXD94_RS06705 1359474 .. 1359484 -  -5.4  -3.03798   AGGGCGAGAAAGAAT                 GTGA GGC TCAC                 CCGGCCGATGGGCAG  47 186
CXD94_RS06700 NONE
CXD94_RS06695 NONE
CXD94_RS06690 1357243 .. 1357264 -  -9.4  -3.01712   CCTGTCGGTGGAACA           GGCCG-GCC GCCAT GGCGCGGCC           CAGGCGGCGGTGCGG  57 396
CXD94_RS06675 1355620 .. 1355642 - -20.6  -5.41746   AAGCGTCCAAAAAAA           CAGGGCCGCC CGA GGCGGCCCTG           CGATCGCGGCGCGGC 100 51
CXD94_RS06670 1354785 .. 1354807 - -10.5  -3.34398   CGCGGCGCGGAAACA           TCGCCGGCG CGCGC CGCCGTCGA           ATTGGGCGCGGTCAC  63 273
CXD94_RS06665 NONE
CXD94_RS06660 1353280 .. 1353302 -  -3.3  -3.24747   GCGTGACATGATGAA           CTCCGGG TGGGCAGGG CCCGGCG           AGGCGGGCCGATGCC  46 89
CXD94_RS06655 1352306 .. 1352356 -  -5.6  -3.42996   CACCATCTACCACAA CCCGCGT--TGCAGCACGTCGC-GCA ACG TGCTGCAA-ATGCTGCGCGACGCGGG CATCGAGCCCACCAT  52 403
CXD94_RS06630 1347456 .. 1347469 -  -2.3  -2.62184   GTGCGCGTCAGACCA               GCTTG AGGT CGAGC                GGACGCGCGCCCGGA  38 4
CXD94_RS06625 NONE
CXD94_RS06620 NONE
CXD94_RS06615 NONE
CXD94_RS06610 1345296 .. 1345308 -  -2.6  -2.78384   GTGCGGTTCATGACA                GCGC CCTCT GCAC                GACCACGGCCACCGC  38 5
CXD94_RS06605 1344523 .. 1344539 -  -4.4  -3.10641   GAAGGCATCAGGGAA             CGAG-GG CGGT CCACTCG              GGGCTGGAGAATTTT  47 1
CXD94_RS06600 1343605 .. 1343643 - -10.4  -3.53012   CCGGCGCGCGGCAAA  GGCG-CGAACAACG-GGC CTTGC GCCGCGTTGTTCGGCGGC  GCCCGCCGCCGGCGC  67 41
CXD94_RS06595 1342994 .. 1343006 -  -4.7  -3.02739   GGGAACGGATACAGA                CGGGC CGC GCGCG                GCGTCCGTGGCGACA  45 82
         psd 1341956 .. 1342012 -  -2.2  -2.74192   CAGTGCGGAAGACGA CATGAGAGCTCCAGAAACGGCGGC GATGGCCAG GCCGCAATCTAGCAAGCCCTCATG TATCGATAAAGCGAA  38 56
CXD94_RS06585 1340346 .. 1340378 -  -5.6  -4.31837   AAGAAACTGAAGAAA     GGCGATGCCATCCCGC AGG GCGCGAC--CATCGCC     GTGCCCAACGACCCG  69 461
CXD94_RS06565 1338081 .. 1338138 - -12.5   -3.3514   ATTGACAGTTCACAA CTAGCGGATACTGCGTGCGCAGGGCGCG CTG CCCGCCCAGCG-ACGCGGTCAGCGCCAG CACGACGGGCATGGC  73 193
CXD94_RS06545 1334758 .. 1334791 -  -4.5  -3.84451   CCGCCGAAATCGAAA     TGGTCGAGACACT-GG GCT CCGAGCAACTCGTCCA     TGGCCGCTGCGGCAA  60 296
CXD94_RS06520 1329527 .. 1329547 -  -5.3  -2.53263   GCGACGCCGAACTCA            TCGGCCGAA CTC CTCGGCCAG            CTCGCGCGACCGGCG  44 2
CXD94_RS06515 1328858 .. 1328868 -  -3.2  -3.53811   GGGACCCCGTCGAAA                 TGCG TGA CACA                 TGACGCCGTGAATTG  49 103
CXD94_RS06510 NONE
CXD94_RS06505 NONE
CXD94_RS06500 1326428 .. 1326464 -   -13  -2.71791   ACTCGTGCTCCAAAT    GGCTCCGGCTCCGG TAGTGCGAC CCGGAGCCGGAAAC    CTGGGCGTACGTTGA  67 72
        livH NONE
        livM NONE
CXD94_RS06485 NONE
CXD94_RS06480 1322526 .. 1322536 -  -8.2  -3.60098   ATCGCCCACCTGAAA                 GCGC GCG GCGC                 CGATGCCGTGGTGCT  63 267
CXD94_RS06465 1320371 .. 1320409 -  -4.4  -3.53012   TCGGCCGCGGCGAAA   GCATGCTGACCACGATGT TCT ACATCGTGGCAGGCCAAC   TGGTGTGCAGCGCCG  52 338
CXD94_RS06455 NONE
        trxA 1312186 .. 1312227 -  -2.1  -4.06864   GGGAGATAAGAAGAA GGGTTCGGGCGGCGGGCC ACGGACG GGCCCGC-GCGGGAATCA GGGGGGAATGCGCGG  58 66
         rho 1310853 .. 1310870 - -14.1  -4.54727   GCCCGCAAAGCAAAA             CCCCGGC GCGG GCCGGGG              GTCGGGACGGGCGTG 100 54
CXD94_RS06415 1304275 .. 1304287 -  -4.7  -4.09243   GACATGGCGTGAAAA                GCGGC TTT GCAGC                GGGGAAAAACCGTTA  62 38
CXD94_RS06410 1303427 .. 1303439 -  -6.2  -4.11501   CCAAATACAAGGAAA                CCGC GCGCG GCGG                GTTGGCGGTGAATAT  69 191
CXD94_RS06400 1300052 .. 1300091 - -11.5  -3.05384   GTGCGGGCCATGGAA GCG-CGCCTGCAGCAGGGCG GCG CGCCC-GCC-CAGGCATCGC GCATCGTGGTGTATC  62 181
CXD94_RS06380 1294886 .. 1294919 -  -5.2  -3.14963   GGCATAACGAGTGAA     GCGCTGGACTGCGA ATTGCG TGGCAGTCTAGGGC      CTGGCCGGCGCCGTG  49 133
CXD94_RS06375 NONE
CXD94_RS06370 1293672 .. 1293682 -  -4.6  -4.07568   CGCTTCGCGCGAAAA                 CGCG TAA CGCA                 CGTGCCGGCCGCCTC  62 92
CXD94_RS06325 1282064 .. 1282087 - -11.7   -4.8622   CGCGCCAATGAAAAA          GGCCCGGCA GCGATG TGCCAGGCC           TTGATCAACGATTTG 100 39
CXD94_RS06315 1279415 .. 1279431 -  -5.7  -2.64472   GATGTCGGAAATCCA              GGCGGCC TAT GACCGCG              GCATCCTGCGCATCA  45 268
CXD94_RS06305 1277804 .. 1277814 -  -5.4  -5.69473   GATATCAGAAAAAAA                 TCTC GAT GAGA                 AATGGGGGACGTGCA 100 300
CXD94_RS06295 1277619 .. 1277640 - -17.3   -4.8622   GCGCCCAAGCAAAAA           GGGCAGCCC GGAT GGGCTGCCC            TTTTTTTCTGGTGCC 100 34
CXD94_RS06275 1274673 .. 1274687 -  -4.2  -2.73124   GTTTAGGGTTGAAAT               GACTGG CTC CTAGTC               TAACGAACTGCCCGG  41 71
        kynB NONE
        kynA 1272972 .. 1273008 -  -3.5  -3.40403   CTTCTTTCATGATAA    TTTCCCAGGTTAGCGGG TCG CCAGCCAGGCCGGGCAA    GCAGCCCGGCGCACG  49 152
CXD94_RS06260 1272652 .. 1272667 - -10.4  -5.86061   CGCGAGGAAAAAAAA              GCAGCC CGCA GGCTGC               TTTCTGGTGCGCCTC 100 58
CXD94_RS06255 NONE
CXD94_RS06250 1269306 .. 1269323 -  -6.9   -3.9777   GCCAAGAGCGAGAAA             CACGCCA AGAG CGGCGCG              CATCACGGTGCCCAC  66 147
CXD94_RS06230 1264990 .. 1265006 -  -9.3  -2.73364   CCGTCACCGTAATCA              GCGCGCC GCC GGCGTGC              CCAGGCTGGCGGCCA  55 6
CXD94_RS06225 1264131 .. 1264165 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS06215 1262289 .. 1262321 -   -17  -3.01791   ATTCGGCCGCCAAGA     GCGCCCTGGT-CGGG TGCA CCCGCACCTGGGCGC      TGGAACTGGCCGAGT  82 290
        hpnC NONE
        hpnD NONE
CXD94_RS06190 1256988 .. 1257000 -  -4.7  -2.93073   CCGGCTCAAGAACCA                CGTCG CGA CGCCG                GCCTGAGGAGTCTTC  44 450
CXD94_RS06165 1253864 .. 1253874 -  -3.2  -3.45366   CGGTCAATGAATGAA                 TAGC AGT GCCA                 GCACGACCGGGATGA  48 3
CXD94_RS06160 NONE
CXD94_RS06155 NONE
CXD94_RS06150 NONE
CXD94_RS06145 1249897 .. 1249925 -  -6.6  -3.28712   CGCGGTGCGCGACAA       GC-TGGCCCAGGC GTTC GCCCAGGCCGTGC        GCGATCCGGCCACGG  52 184
CXD94_RS06130 1246066 .. 1246078 -  -4.7  -2.72344   CGGGATGTGCAAGCA                GGCGG CTG CGGCC                GGGGAGATTGTCCAT  43 499
CXD94_RS06110 1242873 .. 1242897 - -13.6  -3.30771   CGACATCCGGCACAA         GGTGCGGCTCG ATGG CG-GCCGCACC          GAACTGGCCGTAGGG  74 251
CXD94_RS06080 NONE
CXD94_RS06075 1232321 .. 1232352 -  -2.7  -3.14931   GGCAGCCCGCATGAA      TCCGGCGGGCCAC GAGGTA GAGGTCCGCCCGC       AGGGCTGGCGGTTCG  43 364
CXD94_RS06040 1228874 .. 1228897 -   -16  -3.21416   GAGCGCTACCAGGAA          GCGCTGCGCGC CTG GCGCGC-GCGC          CATCCCGAGGCGGCA  80 66
CXD94_RS06020 NONE
CXD94_RS06015 1225261 .. 1225288 -   -14  -4.56597   TTGGTTGTCGAAAAA        GCCGCGGCGGGC GCGG GCCCGCCGCCGA         TCGGGTTGCGCTCAG 100 37
CXD94_RS06010 1224338 .. 1224377 - -11.5   -2.9162   GAACTCCGGAAACGA CTG-CACGGCG-GCGCC TTGGTGGG GGCGCACGCCGCGGCAG  GATGGCGCGCCAAGG  63 69
CXD94_RS06005 NONE
CXD94_RS06000 NONE
CXD94_RS05995 1222117 .. 1222149 -  -5.3   -2.9296   GAAAGCCCAACCATA      CCATCGCCCCACGGC GCC GCCGCCATGCGCCGG      TTCATGGCGCCGCGG  46 65
CXD94_RS05990 1220819 .. 1220866 - -14.1  -3.61517   ACCTGTGTCGAATAA CGCACGGGCCGCCGGCGCACGCG CGGG CGCGCGCGCCAT-GGCC-GCGCA AGGCGGCCGCGGTGC  78 300
CXD94_RS05985 1219890 .. 1219904 -    -7  -2.85668   TATCCGCATACCATA               GCGCCG CGC CGGCTC               GTTGCCAAGGCATCC  50 53
CXD94_RS05975 NONE
CXD94_RS05970 1217659 .. 1217679 - -10.3   -3.6502   CACCTCCTAGGGAAA            CCGGCGGCG GAT CGCCGCCCA            CGGAAAAGTCTAGCA  70 70
CXD94_RS05965 1217127 .. 1217150 -  -7.4  -3.06302   AGGACCTGCAGGGAA          TGCCGC-CCGC GGC GCAACGCGGCA          GCCCGGCCGTGGGCC  52 162
CXD94_RS05935 1211064 .. 1211086 -  -6.8  -3.29144   CGACCGCCGCTACAA           CGGCCTGGCC CTC GACGCGGCCG           AAGGCGAACGCATCG  52 305
CXD94_RS05925 1209054 .. 1209072 - -10.2  -3.44051   GTTCCACTACGAGAA             GGCGCGCA TGA TGGGCGCC             AAGCCTGCGGCCCCC  65 297
CXD94_RS05895 NONE
CXD94_RS05890 NONE
CXD94_RS05885 1200518 .. 1200567 -  -8.4   -3.9392   CTCCAGTGTAAACAA CCCGCCTGCCGCGCCGCGCTGGCGC TCA GCGCCCG-GCGGCGC-GC-GTCCCG CCGTACAGGCGCAGC  70 1
CXD94_RS05880 1199825 .. 1199859 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
        bamD 1188802 .. 1188830 - -21.1  -4.08064   AACGGCCGCGCAAAA        GGAAAACCCGGCC TGG GGCCGGGCTTTCC        TTGGACTGCGCGAGT 100 45
CXD94_RS05810 1184130 .. 1184166 - -27.4  -2.71364   GGATCGGGGCAACGA   CGCAGGCGCCGCACCCG ATGA CGGG-GCGGCGCCTGCG    TTGCGATCAGCGCTT 100 32
CXD94_RS05785 NONE
CXD94_RS05780 1179422 .. 1179432 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 91
CXD94_RS05775 1177914 .. 1177932 -  -8.9  -3.28924   CACGGTGGCCGACAA             GGAAAGC GCGCT GCTTTCC             GGCCAGATCGATACC  59 511
CXD94_RS05765 1176305 .. 1176322 -  -2.5  -3.58343   TCGAGCATCGCGAAA             TCCGCGC CCAG GCGCTGG              CCGGCTCGGTCGTGT  50 376
        mdeB 1163924 .. 1163961 - -20.6  -3.06796   CTGCACCGCAGCGAA   GACGGCATCGGCCGGG CCACGT CCCGGCCGATGCGGCC    GTCACGACTGCCAGG 100 27
CXD94_RS05725 1161361 .. 1161378 -    -4  -3.04144   TTTGCATGGGTAACA             CGGGCG TCTTGG CGCCAG              AAGAGTTATGGAGCC  44 173
CXD94_RS05720 1160684 .. 1160694 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS05710 1159312 .. 1159342 -  -6.8  -3.65046   CCTGTACGGCAAGAA      GCGCCTGCGC-GA AATCGA CCGGCGCATGCGC       TTCCTGACCAAGCGC  57 363
CXD94_RS05650 NONE
        recJ 1139748 .. 1139759 -  -7.2  -3.65812   CGGTTTGTAACAGAA                GGGC GGCG GCCC                 TCAGGCGGCGTGCTC  61 26
CXD94_RS05640 NONE
CXD94_RS05635 NONE
        lysS NONE
CXD94_RS05625 NONE
CXD94_RS05580 1124438 .. 1124456 -    -8  -3.53012   CCTCCTTGCTGCAAA             GCGGCGGC GAT GCCGTCAC             GCGGCAGATGCTGGC  58 170
CXD94_RS05560 1120533 .. 1120553 -  -2.5  -3.31144   CCTTGACGCGCAGAA            TCTCGCTGA CTT TCAACATGA            TGTTCCTCCCGGGGC  44 60
CXD94_RS05555 1120034 .. 1120044 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 74
CXD94_RS05550 1118811 .. 1118836 - -16.9  -3.12595   TGCAATGATGCAATA         CGCCGCGACGCA GAT TGCG-CGCGGCG         TGCCGCTGCGCGTGA  80 219
CXD94_RS05540 NONE
CXD94_RS05535 1115691 .. 1115701 -  -4.6  -3.30124   CGCTATCGCGCAGAA                 CGCC ATC AGCG                 GGCCGAACGCCTGGC  49 374
CXD94_RS05510 1112849 .. 1112864 -  -4.6  -2.57132   GCGCCGCTGGATAAG              GGGTGG ATGG CCAGCC               AACCGTTACAAGTTG  42 53
CXD94_RS05505 1110755 .. 1110771 -  -2.2   -2.8372   TATTTGCCATGAAAC              CTTAGC AGCAG GCTCAG              ACCGCGGCCGCCGTA  40 22
        folP NONE
CXD94_RS05495 1108510 .. 1108529 - -16.4  -5.06414   CCCGCGCAACAAAAA            GGCCCGCC ATCA GGCGGGCC             TTCGGGCAGGTCCGG 100 48
CXD94_RS05490 1107381 .. 1107408 - -21.4  -3.48276   CCTGCCCCGATACAA        GGTGCCTGTCCC CGCG GGGACAGGCACC         CCAGCACCCCGTCGG 100 154
        ppk1 1103459 .. 1103478 -   -15  -5.09259   TATTTCAAAATAAAA            TGGCCGCC CGCG GGCGGCCA             GGCGGCAGCGGGCCG 100 43
        pstS 1102197 .. 1102218 - -10.1  -2.52464   CGCCCCGCGAAGTCA           GGACGGCGA TCGC TCGCCGTTC            ACTGGTCCGGCCAGG  56 68
        pstC NONE
        pstA NONE
        pstB 1099392 .. 1099426 -  -7.7  -3.49858   GCAACTATACCAGAA    TCGGCC-CGCCGGCCG GCCT CAGCCGAAGCGGCCGG     TGATGTAGTCTTCCG  60 9
CXD94_RS05455 1099159 .. 1099199 - -11.2  -3.86346   GCACGCCCGCAGAAA CGCGAAAGCCCCGAC-CGG AAAT CCGTATCGGGGCTTTGACA  TGCATGGAGCGGCTA  77 119
CXD94_RS05450 1097975 .. 1098013 -  -3.8  -3.32844   GTTCGCACGCGAGAA  CGGCCGG-GTGTTCG CCTATGTCAT CGAGCACGCCGGGCG   GCACCCCGACCCCGA  47 104
CXD94_RS05425 1091599 .. 1091609 -  -8.2  -3.53091   ACCCGTTTGCCGAAA                 GCCC GGT GGGC                 GCGCAAGGGCTGATG  61 336
CXD94_RS05410 NONE
        cobA 1085531 .. 1085571 - -14.7  -3.32498   TACGGTACACACCAA CGGCATCGCGCACCGCAC CGAACT GCGCGGCACGCG-CGCCG  AACTGGGCCTGGGCA  78 220
CXD94_RS05375 1083408 .. 1083432 -  -7.9  -3.35679   GGGGCTGAGCGACAA         GCTGGTCGTC ATGCAG GACG-CCAGC          GGCCAGCACAGGCTG  59 104
        queA NONE
CXD94_RS05345 1075660 .. 1075686 - -12.3  -2.70932   GGCGCGGCGCAACGA        GGGCCGCGCCGCC GGG GG-GGC-CGGCCC        TAGTCGACCCCGCGC  65 25
        yajC 1075168 .. 1075186 - -17.4  -3.65046   GGGTGAGCGGAACAA             GGCCCCGC CAC GCGGGGCC             TTGTGTGACCTTACA  91 36
        secD 1073196 .. 1073221 -  -2.5     -3.37   TGAATCCGGAAAAAT         TCCATGTTTCGC CTT GCGTATCA-GGA         CGGCGGGCGGCAGGG  46 54
        secF 1072213 .. 1072242 - -22.2  -5.81412   TGCATGTAAAAAAAA       CCCTGCCCGGCC GCATTT GGCCGGGCAGGG        TTTTTTACTACCGGG 100 48
CXD94_RS05325 1070515 .. 1070538 -    -8  -3.61398   CTGGGTGCTCAAGAA          CGTCGTGGCG CGCG CGCCCCGAAG           TGCTGCTTGACGACG  60 403
        miaB NONE
CXD94_RS05310 NONE
        ybeY 1067016 .. 1067051 -  -5.3  -3.31905   ATTTTGCATACAACA    GCGGCCATTGTTCCCC GATTT GGGGCGCATTGGC-GC    CAATCTGCGCGGCGC  51 43
CXD94_RS05300 NONE
CXD94_RS05295 1063947 .. 1063986 -    -5  -3.53444   CCATCCGCCGCGAAA GCGCCGCGGACCTGCTGC CCTGGT GC-GCAAG-CCACGACAC  CGGCGTCATCGTCTA  52 440
CXD94_RS05285 NONE
CXD94_RS05280 1062872 .. 1062885 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CGTAACTTCTACACC  51 54
CXD94_RS05275 1062766 .. 1062787 - -14.5   -5.7946   CCGGGAAGAAAAAAA           GCCAGTTGC TTAC GCAACTGGC            TTTTCGGAATTTTTT 100 40
CXD94_RS05270 1061321 .. 1061340 -  -4.8  -3.28712   GGTGCTGCTGGACAA            CGTGCCGC AGGA GCGCCGCG             ACGAAGCCAATTCGC  49 235
CXD94_RS05205 1049128 .. 1049162 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 493
CXD94_RS05195 1047877 .. 1047889 -  -4.7  -2.90496   GCCCGCGGGAAATCA                GCGGC GGT GCTGC                GGCGGACGGCTGGGC  44 10
CXD94_RS05190 1047447 .. 1047474 - -11.2  -2.75074   TGCACTGGAACATCA        GCCTGAACGACG CGCG CGTCGATCCGGC         CATCTTCATCGGGGC  59 70
CXD94_RS05150 NONE
CXD94_RS05145 1040224 .. 1040234 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 238
CXD94_RS05140 1039001 .. 1039018 -    -4  -3.60805   ACAGCGTAGCGCAAA             CCGGGC CGTCCT GCCCGC              CGGCGTGGCGCGCGG  51 44
CXD94_RS05135 1038248 .. 1038269 -  -8.1  -3.64599   CTATTACACCGCAAA           CGA-TGTTGC GGT GCAACATTCG           TGTGACCGGGGCGCC  63 48
CXD94_RS05130 NONE
CXD94_RS05125 NONE
CXD94_RS05120 NONE
        fabI 1032412 .. 1032423 -  -7.2  -3.33483   GATCGAAATCATGAA                GCGC CGCG GCGC                 CGAGGTGCCGATTCC  55 470
CXD94_RS05095 1027483 .. 1027493 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS05090 1026461 .. 1026500 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CXD94_RS05085 1025410 .. 1025423 -  -3.1   -4.2074   CTCCCAAGAGAGAAA               GGCTT CTTC AAACC                GGGCAGCTAGTTGTG  63 32
CXD94_RS05080 1024132 .. 1024158 -   -13  -4.65895   CGCCGGACGCAAAAA        CGCCCGG-CGC GGTGAG GCGGCCGGGCG         TACGTACTGCCATGG 100 79
CXD94_RS05060 NONE
CXD94_RS05055 NONE
        folD NONE
CXD94_RS05045 1012060 .. 1012095 -   -19  -2.59431   GGCGTCCAGAAGTCA    GCAGGTGCCAGTCCCC CTGC GGGGACAGGCACCTGA     GAGGTCAGGCTTGCA  87 30
CXD94_RS05040 1011275 .. 1011292 - -14.1    -3.965   GCGCAAAAGCAACAA             CCGCGCC CTGG GGCGCGG              TCCGGATCATTGGGT  84 32
CXD94_RS05035 1010853 .. 1010883 - -25.6  -4.07568   CGCGGCCGTCCAAAA       CAGACAGGCCGGCA AGA TGCCGGCCTGTCTG       TTTGCGCAGTGGCGA 100 44
CXD94_RS05015 1004363 .. 1004392 -  -4.3   -4.1822   CGCGAGGGCAAGAAA       CGCCAGATTCGC CGCATGT GCGAA-CTGGTG       GGGCTGCGGGTGGTG  63 182
CXD94_RS05005 1003122 .. 1003150 - -10.2  -4.07885   GATTCTGCGTCAAAA       CCGCCG-GCGGCG TCAG CGCGGCGCGACGG        GCGCGCGCGCCAGCG  78 9
CXD94_RS04995 1000384 .. 1000400 -  -2.2  -4.42238   GCAGTTGAAGGAAAA              CATCGA GAGCG TCGAGG              TCACCCTGTCGGACG  68 234
CXD94_RS04970  995345 ..  995365 -  -8.1  -3.01712   CGTGGTCCGCGAAGA            GCCGGGGCC TCG GGGCCCGCC            GGCTTCAACACCAGG  53 438
        mltB  979711 ..  979723 -  -4.7  -3.57144   CCGGGCATCCGCAAA                TGGCC CGA GGCCT                ACATGCCGAAGATCT  54 322
CXD94_RS04815  962454 ..  962474 - -18.3   -5.4505   CGCGGCAAGAAAAAA            GGGCCTCGC TAT GCGAGGCCC            CCTCATTGTAGCGGC 100 52
        ubiG NONE
CXD94_RS04805  960920 ..  960942 -  -2.7  -2.77899   TGGGTGGAGCAATCA          GTGGCCGG GTGTGGCG CCGGC-AC           GGGCATGGGGCCCGC  40 59
CXD94_RS04800 NONE
        ssrA  959096 ..  959118 - -13.6  -5.85178   AACAGCCAAAAAAAA           TAGCCAACTT TTG AAGTTGGCTA           TTAGGTAAATACTTG 100 57
CXD94_RS04790  958823 ..  958851 -  -6.9  -3.02471   TGTGTACTATACACA        CTTTTAATGTGTA TAG TACACATTAACAA        ACTATTTTGCCCCGC  51 19
CXD94_RS04785  958594 ..  958620 -  -7.9  -2.84298   GACAGTTCACAACTA         GCAGGCCCCGA TTGCT TCGGGGCTTGT         GTCTCACTTCAAACC  52 29
CXD94_RS04775  957055 ..  957092 - -11.3   -3.6682   TGCTACCCACGCAAA   CGAGAGCCCCGATACGGA TTG TCCAG-TCGGGGCTCTCT   GCTGGGTGCGTCGGA  73 55
CXD94_RS04765  954635 ..  954669 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS04750  952077 ..  952110 - -13.1   -3.0497   AGAGTATCTGGAATA     CCGACGCGCTGCGCGC CAT GCGCGAAGCG-GTCGT     GTACGGAGTGCCGTC  70 111
CXD94_RS04740  949563 ..  949573 -  -2.4  -3.02381   GCAGAACACCATAGA                 CCGG CAT CTGG                 GGGAATTGGTTTCCG  41 119
CXD94_RS04735 NONE
CXD94_RS04725 NONE
CXD94_RS04720  944521 ..  944552 -  -5.6  -3.14132   CGTGGGGGCGAGCAA      GCCGCGCCACCTGG AGGA CGCGGTGGCGGCGC       TGGCCCTGCGCCTGA  47 102
CXD94_RS04705  940784 ..  940803 -  -2.8  -3.53761   CAAGGGGCGGCGAAA            GCG-CGC ATCTTGG GCGTCGC            GGGGGCGCTTGTCAA  49 37
CXD94_RS04700  940177 ..  940211 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGACTTACGC  48 191
CXD94_RS04600  919686 ..  919697 -  -5.8  -3.53811   TCGATCTGCCCGAAA                CCCT GACC AGGG                 TGCAGCGGCGCGATA  57 414
CXD94_RS04590  918151 ..  918198 -  -4.1  -2.71712   GCGCGGCGCCGAAAT CGCTACACTGGACGTACGGGCGCG CGC CG-GCGCAT-CGGCC-GCGCAGCG CCCAAGGAGGCGATC  41 220
CXD94_RS04570  914775 ..  914809 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS04555  911156 ..  911171 -  -3.2  -2.87132   TGGCCTCCTTACAGA              TCCTCG GAAC CGAGCA               GCATCTCGGTCAGCC  41 3
        ilvN  910621 ..  910648 -  -8.2  -2.55074   GTGAATGCTAATGCA        GGGTGGCGCGCC GCCA GGCGCGCCGGTC         AGATTTTCAGTATCC  52 24
        ilvC  909491 ..  909508 - -14.1  -5.79595   GCGGAAAAGAAAAAA             CGCGCCC CGTG GGGCGCG              TCTGGACCAGCCTGC 100 75
        pssA  908424 ..  908437 -  -8.1  -3.27022   GCCAGCCGAGATCAA               GCAGG TCGG CCTGC                CCAGCGTGCGCCAGG  56 199
CXD94_RS04530  907834 ..  907857 -  -4.5  -3.63367   GGTTTCAAGAAAAAC          GAGC-CCCGA GACAA CCGGGCGCCC          TGTTACGCTGTTGCC  55 28
CXD94_RS04525  907438 ..  907473 - -16.8  -5.04601   CTTACAAATGAAAAA    CCGTGGCCGTTGCGAC ATGC GTCGCCCCGACCACGG     TTGCGTCATGGGGAG 100 54
         pnp  905210 ..  905227 - -14.1  -4.66163   ATGCGGACGCAAAAA             CGGCGCC CGCG GGCGCCG              TTCTTGCGTCAGGAA 100 50
CXD94_RS04515  904212 ..  904246 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS04505  901773 ..  901796 -  -3.7  -3.73775   CGCAGCCTTACGAAA          CGGGGCTGC GCTACA GCGACCCCA           AGGATTTCCATGTGA  55 336
CXD94_RS04490  899846 ..  899878 -   -14  -4.66318   ACCAGGGCAAGAAAA      TCCGGGCGCACCGG GCGAT CCGGCGCGCCCGCC      GTCCGGCTGGCGCTA 100 38
CXD94_RS04485  898986 ..  898998 -  -5.5  -3.02074   CAAAGACATTACAGA                CTCCG GAA CGGAA                ACTTAAGCTGCGGCG  47 28
        secG  898494 ..  898523 -    -3  -4.09685   CGGCATCCTGCAAAA      CTTCGACCAGGATC CGAA GATCCTGG--AAAG       TCGGGCATTCTAGCA  59 35
CXD94_RS04475  898312 ..  898337 - -13.3  -4.91109   CCTGGACGACAAAAA         GCCCATAGGCG CTGA CGCATATGGGC          TTTTTTGCTGGCTTT 100 86
CXD94_RS04470  895391 ..  895416 -  -2.4  -3.58343   CGGAGCATCGGGAAA         CCGAACTGGC GCAACT GCTGGTCCGG          GAGGCCGGGGCCCTG  50 123
CXD94_RS04460  893153 ..  893191 - -12.4  -3.87994   AGTGATGCCGACAAA  CCGCCCGCGCCGT-GCG GACGGA CGCTACGCCGCGGACAG   GCGCGTCCGATAGGA  81 11
CXD94_RS04455 NONE
CXD94_RS04450  890179 ..  890189 -  -2.4  -3.35679   CGGCCCGATCGAGAA                 TCGC TTC GCGC                 AGGGCCAGCACCGAC  46 494
CXD94_RS04440  887982 ..  888010 -  -2.9  -3.86015   TATCTGTCCCACAAA        GTCCTCGCTTTGG GCA CCAACTCGCGGTC        ATCGGCGTGCGGTGG  56 91
CXD94_RS04435  886500 ..  886514 -  -5.6  -3.53091   AGGCGTGCGGCCAAA               GCATCG AAG CGCTGC               GCGAGGAACAGCAGC  52 374
        metC NONE
CXD94_RS04415  882385 ..  882443 - -18.7  -4.56597   TTCTTCGTTGAAAAA GGCCACGCGCCGCGGGCGCGGGCCGAACG CAA CCACCGGCGC-CGCCCGCGGCGC-CGGAC CTGCTCGAATCGGAA 100 66
CXD94_RS04410 NONE
CXD94_RS04405  879287 ..  879299 -  -3.3  -3.63627   CGTTCAGATGCGAAA                CGCCA CGG TGGGG                TCGGACCGGACCTTG  53 1
CXD94_RS04380  871877 ..  871901 -  -5.6  -4.00042   CGCGCCATCAAACAA         TGCGGC-CGGC CCGC GCCATGCCGCG          CAACCCATGCTGCAA  63 63
         azu  871166 ..  871187 - -11.5  -2.62184   TGTTTCGCGAGATCA           TCGGCCCGC AGGC GCGGGTCGA            GCGGGCCGAGCACAT  59 142
CXD94_RS04345 NONE
CXD94_RS04340 NONE
CXD94_RS04335  860072 ..  860085 -  -3.7  -4.35461   TCAAGACGATGAAAA               GGGGC TCGC GCCCG                CTCAGGCCGCCGCGT  68 59
CXD94_RS04330  859144 ..  859166 -  -3.3  -3.38046   TGGGTATCCGAAATA           TGCAGCACG CGCAT CATGCCGCC           TCCAGCCGCTGGCCA  48 16
CXD94_RS04325  858322 ..  858336 -  -9.2  -3.14795   AAAGGTTCACGAACA               GCGGCA TCG CGCCGC               GGCGCGCGTCATCCG  59 34
CXD94_RS04320  857328 ..  857343 -    -6  -2.66326   TGAACGGGAAATCGA              CCGCAC CCTG GAGCGG               TTCAGCGACGGCAAG  45 207
CXD94_RS04290  853586 ..  853621 - -26.4  -4.24326   AAACATGATTCAAAA    GCGAAAAAAGCCGCCC CGAA GGGCGGCTTTTTTCGC     GCGGGCACGAGGCCC 100 86
CXD94_RS04285 NONE
CXD94_RS04280  852599 ..  852615 -    -5  -3.05384   GGCGGCGCGATCGAA              CCGCGC CGCCC GCGCCG              GTGGTTCAGCGCGCA  45 31
CXD94_RS04275 NONE
CXD94_RS04270 NONE
        nuoE NONE
        nuoF NONE
CXD94_RS04255 NONE
        nuoH NONE
        nuoI NONE
CXD94_RS04240 NONE
        nuoK NONE
CXD94_RS04230 NONE
CXD94_RS04225 NONE
        nuoN NONE
CXD94_RS04215  838453 ..  838469 - -13.7  -5.78622   GTAGGCGAAAAAAAA              CCGCCTC ATG GAGGCGG              TATCGCTGAAGCGGC 100 50
CXD94_RS04210  835915 ..  835935 - -11.8  -4.98531   GCCGGAAATGAAAAA            CGGCCCCC TTGCG GGAGGCCG            TCGGAACGGCGGGGT 100 52
CXD94_RS04205  833440 ..  833456 - -15.1  -6.09133   CATGCCAAAAAAAAA              CCGGCGC AAT GCGCCGG              TTTTCCCTGCTGCGC 100 49
CXD94_RS04200  832579 ..  832608 - -10.6  -2.65808   ACCGCCAAGAACGCA       GTCGTCGGCCTG ACCCGG CAGGCCGCCGGC        GAAGTGGCCGAATTC  55 266
CXD94_RS04180  828063 ..  828092 - -23.7  -3.03006   AGTAAGCCACACATA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        ATGAACACTTGACGG 100 114
CXD94_RS04165 NONE
CXD94_RS04160  822458 ..  822468 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS04150  821409 ..  821440 -  -8.7  -3.61398   CCTGGGTTCGAAGAA      CGAGGTGG-AGCGC GTGGG GCGCTACCACGCCG      AAGCGCACGCCAGCT  62 39
CXD94_RS04135  816871 ..  816881 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS04130  815811 ..  815832 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CXD94_RS04125  814670 ..  814689 -  -4.4  -3.45571   GTGGGGAAATATCAA            TGTATACA TGAC TATATACA             TCAATGGATATCGGC  51 162
CXD94_RS04120 NONE
CXD94_RS04115 NONE
CXD94_RS04110 NONE
CXD94_RS04105 NONE
CXD94_RS04100 NONE
CXD94_RS04095 NONE
CXD94_RS04090 NONE
CXD94_RS04085  805378 ..  805418 -  -3.6  -3.65046   TTGTCATTGTAATAA  CTCCTGGCCGGGCGCCGG ACGGG CCGGCGGCGGGCGCCGCG  CGGCCCGCCGCTCGA  54 44
CXD94_RS04080  804496 ..  804509 -  -5.9  -2.78935   ATATCGGCCAGTATA               GCGGC GGCA ACCGC                GAGCACACGGGTTCG  46 86
CXD94_RS04065 NONE
CXD94_RS04060  799898 ..  799909 -  -5.8  -3.01712   GTGTTGGCTTGAACA                TGCC TCAG GGCA                 TGTAGAAGCCGCCGT  47 18
CXD94_RS04055 NONE
CXD94_RS04050  797738 ..  797749 -  -5.8  -3.93695   TTCACCAGCGAGAAA                GACC TGCG GGTC                 AATCCGCTGGCGCAA  63 522
CXD94_RS03990  781894 ..  781913 -  -4.3  -2.71144   TACGGCCGCGAAGGA            TCGCGCCA TGGCC TGGC-CGA            GTACATGCAGATCAA  40 84
CXD94_RS03955  771809 ..  771834 -  -8.9  -3.70902   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG  65 63
        rplU NONE
CXD94_RS03930  768296 ..  768317 - -17.3  -5.45802   GCCTGAAAACAAAAA           GCCCTGCCG CGTG CGGCAGGGC            TCGCCGTTCCGGGGA 100 53
        obgE NONE
CXD94_RS03920  765796 ..  765818 -  -4.1  -3.13073   ACGGTCAGGAATACA           GGACAAATC GGAGG GGCTTGTCC           GGCATGTTGGTTGGT  45 62
CXD94_RS03910  764070 ..  764104 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 310
CXD94_RS03895  762739 ..  762762 - -10.2  -4.41348   TCTCGCTGAAATAAA          GGCGCGCGCCC GGT GGG-GCGCGGC          AGGGGCATTATTCCA  88 56
CXD94_RS03890  760357 ..  760367 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 183
CXD94_RS03885  759291 ..  759335 - -10.6   -2.8294   TATGGTGCACAAGCA CCTCACGCGC-GCGCTA-CGGC ACT GCCGCTCCCGCTGCGCGCGTGG GAACACGGCGCCGAT  57 43
CXD94_RS03875  757626 ..  757656 -  -6.2  -4.27584   ATGTTTAACCGAAAA       GAGATTGAAAGTAA TTA CCACTACCAATCTC       TAAGACGGAACGGCC  70 135
CXD94_RS03870  754997 ..  755010 -  -3.7  -3.36803   CAAGGGCATCGACAA               GCCGG TGGT CCTGC                AGGCGCGCCGGAACG  47 217
CXD94_RS03845 NONE
CXD94_RS03840  748390 ..  748413 -    -3  -4.17556   GAGATCCGCAAGAAA          GTCGAACAGG CGCG CGTGTCCGGC           TACGCCGTCACCATC  61 285
CXD94_RS03830  745918 ..  745928 -  -6.8  -3.09516   CGCCGCAGGATGTAA                 CCGA ACA TCGG                 CCGCCCCTTGTGGAT  52 101
CXD94_RS03825 NONE
CXD94_RS03820 NONE
CXD94_RS03815 NONE
CXD94_RS03810  741003 ..  741013 -  -2.4  -4.41348   GGGCTGGGAAATAAA                 CGGG TTA CACG                 GGGTCCACCGGGACG  65 19
CXD94_RS03805  739375 ..  739414 -  -5.7  -3.54408   TCCCAGCGAAATGAA CTGCTCGGTCG-CGCTGTC GGCC GACAGCGACG-CCGAACTC  CTGGAAGCCGCGGTC  57 197
CXD94_RS03795  738009 ..  738019 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 121
CXD94_RS03790  736949 ..  736970 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CXD94_RS03780  735731 ..  735758 -  -6.2  -2.79188   CATCGAAGGCAACTA        CGCCAACG-GCCG CCG CGGCACGCTCACG        CCCGATCCGCTGGCG  46 163
        lptD NONE
CXD94_RS03755 NONE
        rsmA  728144 ..  728182 - -10.3  -3.01712   CGCTGCGCGGCAAGA  CCCCGGCCGGCG-TGGC CCGCATC GCCAGCGCCG-CCGGCG  TGCCGGTGGTGGCGC  59 254
         pyk  725225 ..  725258 -  -5.2  -3.61398   GGGCGCCTGGAAGAA     GGTGCCGGTCTACGA GACCT TCATCG-CCGGCGCC     AAGGACGGCTTCAAC  54 454
CXD94_RS03650 NONE
CXD94_RS03645  708991 ..  709028 -  -6.1  -2.66787   GCAACAGCGAGATGA   GCAGCGCCCGGGCCCACC AGC GGCGTGCGCG-ACGATGC   GCGCGAACGCTCAGC  46 36
CXD94_RS03635  707728 ..  707743 -  -6.2  -5.00616   TTGTGGCCCAAAAAA              CTGTAT GGAC ATACAG               TGTATGCGAGCATAG  86 294
CXD94_RS03620  706906 ..  706928 -  -7.6  -3.63991   GATGACGCTCAAGAA           TTGGCCGCCG CTG CGGCCGCTAA           TGCTGTTGGCGCTCG  60 278
CXD94_RS03500  690319 ..  690338 -  -4.2  -2.91274   CTCAGCTGAAGCATA            GCTCGGTGA AGG TCGCCG-GC            GGCTTCGGTCCGATC  43 161
CXD94_RS03455 NONE
CXD94_RS03450 NONE
CXD94_RS03445  681919 ..  681936 -  -3.3  -3.54424   GTTGACGCCCTGAAA             GCGTTCGC GCA GCGC-CGC             CGCTTCTTCCTCGAT  49 52
CXD94_RS03440  680835 ..  680850 -  -4.6  -3.01712   GGGGTCTCTGCAACA              CGTGCC CCAG GGCACT               GTTGGTTTTGCGCTG  45 47
CXD94_RS03435  680437 ..  680452 -  -3.2  -3.94438   CATGCTAACAAAATA              GCAAGC ATAT GCTTTC               TTCGGATGTCGGGTG  58 167
CXD94_RS03420  677224 ..  677247 -   -21  -2.60496   GGCGGCCTGAAACAG          GGCCGCCGCG CCAG CGCGGCGGCC           GCGCGCTTGCTTACC 100 36
CXD94_RS03385  670839 ..  670879 - -12.4  -2.73875   TTCCTCGGAATACGA CCCTGAAGC-GGCGCGCGC CCGG GCGCGCGCCGGCCACTGCG  ACACCCGCGCTCAGC  65 36
CXD94_RS03380  669365 ..  669394 - -15.7  -3.01712   CCCCTGGCTGGAAGA       GGACGCGGCG-GCC TGA GGCGCGCCGCCTCC       GCGTGCGTCAGGCCA  77 33
CXD94_RS03365 NONE
        recQ  664913 ..  664940 - -16.2  -3.14344   GACGGCGCGCACGAA        GTGGCGCGCCGC TCGC GCGGCACGCCGC         GTATCGCCAACCGCC  80 410
CXD94_RS03350  663073 ..  663091 -  -6.6  -3.40403   TTCCGCCGATGACAA             GGATACGC ATC GCGCAGCC             CCCTGTAGCATCATT  55 90
CXD94_RS03345  661938 ..  661968 -  -6.6  -3.39784   GCATCGGCAAGAAGA       CCGCGGAGCGCCTG CTG CTGGAGATGCGCGG       CAAGCTGGGCGCGGA  55 228
CXD94_RS03310  656113 ..  656166 -  -6.5  -3.18264   CTGGTGACCGAGGAA GGCTGCGAACTCA-TCACCCGCGGCG TGC CGGTGCAGGCGCGCGAGATCGAAGCC CTGATGCGCGAATAG  51 50
CXD94_RS03300  653270 ..  653294 - -14.3  -2.87132   TGCGCGTCGGACATA          CCGCACCCTGC ATG ACAGGATGCGG          CAGATGGGTGCTCTG  71 218
CXD94_RS03295  652542 ..  652556 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 215
CXD94_RS03285  650486 ..  650497 -  -2.2  -3.53566   AGCCAAGAAGAAAAG                CAGA CTGG TCCG                 ATGCCAAAACCCGCA  48 224
CXD94_RS03280  649237 ..  649275 - -18.8  -2.79831   GTCATCCGAAAACAG   CCAGCAGGTGGCGAGGCG CGA CGCCTCGCCGCCTGATTG   TAGTTGACGACGCGC  87 58
CXD94_RS03275  648300 ..  648332 -   -10  -3.53012   GCCCTGGGCCGCAAA     TACCACGGCCTGATT CCGG AATAAGGCCG-GGTA      TCGAAGCCGCGCTCA  67 38
CXD94_RS03265  645844 ..  645863 - -11.4  -3.21354   GCATACAGCCAGCAA            TCGCGCGG CTGG CCGCGCAA             CGCTGCCGGCATCCA  66 53
CXD94_RS03240 NONE
CXD94_RS03235  641731 ..  641745 - -12.8  -4.27316   CGCCCCAAGGCAAAA               GCCCCC CTG GGGGGC               AGCAAGCTGGCGCAG  91 69
CXD94_RS03230  639966 ..  639984 -   -11  -3.13403   GCTGGGCGAGGAAGA             CGTCGAGA ACT TCCCGACG             CTGCTGGTGCAGGCG  64 190
CXD94_RS03220  638847 ..  638857 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS03215  637807 ..  637832 -  -9.7  -5.00616   GGTTTCCGGAAAAAA         TG-AGGCCCCCC CCG GGGGGGCGTGCA         GGGCAATGCGCTAGA  95 36
CXD94_RS03210  636833 ..  636861 - -12.3  -2.87132   GTGGTTGCGGATAGA        TGCCGCCCCGGGG CGG CGCCGATGCGGCA        CCGCAACAAGGAGCA  66 139
CXD94_RS03205  635798 ..  635810 -  -9.1  -3.71917   ACCGGAAACCGGAAA                CGACC CCA GGTCG                CCTGTTAGTCAGGCT  68 183
CXD94_RS03200  631283 ..  631341 - -22.6   -2.5474   GAAAAGCAATAAAGG CCGCGTCCCAAT--G-CGGCCGGGCCGCGC ATC GCGCGGCCCGGCCGGCCGATCGGG-CGAGG CCTGCGCGCCCGCCG 100 57
CXD94_RS03190  629247 ..  629267 -    -9  -5.40072   CCTTGGGCAAAAAAA           GAGGCCACC CGAA GGTGGCC-C            GAATTCCAGCTCTGC 100 95
CXD94_RS03160  624409 ..  624431 - -16.2  -3.34715   GACGTGCTGGAAACA           GGCTGGCCCG AAC CGGGCCGGCC           GCCCCTCATGGTGTC  82 158
CXD94_RS03100  613321 ..  613369 - -13.8  -3.35679   CCCTTCCAGTGAGAA CGGGCCATCG-GCCCGG-CCGC TGTCGGC GCGGACCGGGCACGCCGGGCCG CAACGACCTGCGGCG  77 207
CXD94_RS03095 NONE
CXD94_RS03090 NONE
CXD94_RS03085  609629 ..  609678 -  -9.7  -5.07011   CAGATAAAGGAAAAA CGATCCCGGGCCGGGCGGCGTCC CGAC GGACGCCCGCCAGCCCTAATACG CGCCGCCGATGCGGT  95 18
CXD94_RS03075  606305 ..  606356 -  -3.6  -3.14132   GGCCTCGCGCATCAA CGCCTCCTACGCCG-ACCCGGC CTGGCTGGCC GCCGGGCGCGGC-TCGGGCGCG CTGTGAAGGGTGCAA  45 125
CXD94_RS03065  604472 ..  604488 - -13.7  -5.60993   CGCCTCAGAAAAAAA              GCCCTCC GCT GGAGGGC              TTTTTCGTGGGCCGC 100 47
CXD94_RS03050 NONE
CXD94_RS03045 NONE
        ftsY  596390 ..  596415 - -20.5  -2.90496   CCGTTCTGGAAATGA         CAACGCCGCCC GGAC GGGCGGCGTTG          CGGGCAGGCGCGAAC 100 46
CXD94_RS02965 NONE
CXD94_RS02960 NONE
        nusB  585927 ..  585959 - -11.1  -3.72695   ACTCCTGCCAGCAAA      CGCGAACGGACGCGC CGC GCGGGCGCGCCCGCG      GAAGGTCAGCGCCGC  73 31
        thiL NONE
CXD94_RS02945 NONE
CXD94_RS02940  583670 ..  583713 - -14.4  -3.28745   GCGGTAAGAACGTAA CCCCCCGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCGCTGAC TTCTCAGGGTGCCTG  75 119
CXD94_RS02915  576717 ..  576740 - -19.6  -6.06723   CTTCCCAAAAAAAAA          CCCCGCCAGG TTCG CCTGGCGGGG           TTTTTCATTGGAGCT 100 44
CXD94_RS02865  565993 ..  566003 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 192
CXD94_RS02855  564944 ..  564954 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS02850 NONE
CXD94_RS02845  562977 ..  562991 -  -3.4   -4.2828   CCGCATCCAGGAAAA               GGCGAC CGT GCTGCC               CGATGGCGGCGAAGT  67 245
CXD94_RS02830  560196 ..  560222 -  -2.8  -5.06103   ACAATTTGCAAAAAA         TAGCCAGACCGC TGG GCAGCCGGACAA         GCCGCGCTGCTCCCG  79 442
CXD94_RS02820 NONE
CXD94_RS02815  559413 ..  559456 - -22.8  -2.72471   GCGCCACCAGAGAAT TCAAAACAAAATGCCCGCAA TCGC TTGCGGGCATTTTGTTTTGT GCGCGATGAAGGACA 100 80
CXD94_RS02795 NONE
CXD94_RS02790  554568 ..  554581 -  -5.9  -3.30474   GTTCACAACTAGCAA               GGCCG GCTA CAGCC                AGCGCTCGAACAGGC  53 18
CXD94_RS02765  548841 ..  548863 - -12.7  -4.57569   TGATGTGCCCAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGCC 100 57
CXD94_RS02755  547895 ..  547923 - -15.4  -3.72576   CCTGCCTTCATGAAA       GCCCCGGTCAATC GCAT GATTG-CCGGGGC        TTTCTCTTTGCCGCG  85 46
         rnr  544882 ..  544907 -  -6.7  -4.08064   AACGCCGCCGGAAAA         CGGCGGC-GGGC CGG GCCCTGCGGCCC         GGTCTACGGTGCAAT  67 80
        rlmB  544066 ..  544088 - -12.6  -3.03124   TCGGACGTTCGAAGA           GGCGCGCGGC GCG ACGGCGCGCC           GCTGCAAGAGTTTAC  67 37
CXD94_RS02735 NONE
CXD94_RS02730  541987 ..  542001 -  -3.4  -4.66537   GCTGTCAAGAGAAAA               CAGCGC CCT GAGCCG               CGCCAATACTAGCTT  71 105
CXD94_RS02725  541459 ..  541471 -  -9.1  -3.64703   GTTTTGTTAGGCAAA                TCGGC AGC GCCGA                TTTGCCTTTGCGTCC  68 42
CXD94_RS02720  541204 ..  541237 - -12.4   -5.4505   GCGCGCAACAAAAAA    CCCCGTGCG-GTGCGC CGAT GCGCCCTCGC-CGGGG     TTATTGCGCCTGCTT 100 92
CXD94_RS02715 NONE
CXD94_RS02710 NONE
CXD94_RS02705 NONE
CXD94_RS02700 NONE
CXD94_RS02695 NONE
CXD94_RS02690  534822 ..  534834 -  -4.7  -3.69068   GGACGGCAAGAAATA                GGCGG CAA CCGCG                CGAGGGTGCCTGTCC  55 98
CXD94_RS02670  530296 ..  530354 -  -4.3  -3.15544   GGGCACCCGGACGAA TTGGCGGCGGGCCACTGGACGGTGGGCTA CGC CAGCCCACAGACCGGCCGCGCGCTGCC-- CTGGGAATGCGCCAC  45 331
CXD94_RS02640 NONE
CXD94_RS02635  524461 ..  524471 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS02630  523445 ..  523457 -  -4.7  -3.57144   GGCCCGAGCCGCAAA                GCGCC CCG GCCGC                TAGCTGTGAACTGTC  54 25
CXD94_RS02620  521045 ..  521073 - -13.1  -3.14564   GCAGCTGCGCATGAA        TGCCTACGCCACC CAT GGCGGCGTGGACA        AGAAGCGCTTCGAGC  68 275
CXD94_RS02590 NONE
CXD94_RS02585  515595 ..  515621 -  -6.4  -3.87373   CAGATCGGCCAGAAA         GGCCACGGCAAG GCC CTCGACTCGGCC         CACTGAGGGCCGCTT  62 50
         smc  510490 ..  510511 -  -2.9  -3.28447   TCACTCATGAGAATA           TCCCGC-GCC TAA GGCAGCGCAA           ATCCGAATATGGGTT  46 41
CXD94_RS02570 NONE
        ligA  507271 ..  507300 - -19.5  -3.15663   AGCCATCGCCATCAA       CAAAATTGCCCGC TTTC GCGGGCAATTTTG        TTTTCGGCTGCCGGG 100 59
CXD94_RS02540 NONE
CXD94_RS02535 NONE
CXD94_RS02530  503126 ..  503142 -  -4.3  -3.05471   AGTATCAAATAACCA              CCCCGAC CCC ACCGGGA              TCAACCCTAATCCGG  45 131
CXD94_RS02525  501753 ..  501776 - -19.6  -2.62735   ACACGGCGCATACGA          CGCACCGGCC CTCA GGCCGGTGCG           AGGTGAAGCAGGAGA  93 101
CXD94_RS02520 NONE
CXD94_RS02515  498477 ..  498496 -  -7.8  -3.29461   CAAGGGCTTCGACAA            CGCCATCA TGCT CGACGGCG             CGGGCCATGTCGCGG  55 392
        pncB  486669 ..  486686 - -14.1  -4.17048   GGTTGGCGAAAACAA             GCCGGCC CTCA GGCCGGC              GGAAGCTGGAACACC  91 16
CXD94_RS02445  486147 ..  486186 -   -18  -4.08945   ACCATCCCGGCAAAA  TGAAGGCATTGCGGCATC GGCC GATGCCGCAATGCCTGTA   CCGTCCCGAGGCGCG 100 114
CXD94_RS02430  482427 ..  482441 -  -4.2  -4.09685   CCGGAGCGTGCAAAA               GACCTA GTG TAGGGC               ACGCGGCCGCCCCCG  61 64
        argE NONE
        trpB NONE
CXD94_RS02415 NONE
CXD94_RS02410  478115 ..  478146 - -10.8  -4.67353   GCATGCATGGAAAAA      TAACAACGCCCGGC CTGG GCCGGGCGTTCGCA       GGCACTGCCGGCGGG 100 46
CXD94_RS02400  476109 ..  476162 - -13.7  -3.68359   GCCGGAAAATCATAA GACCACTCCTCGGGTGCCTGTCCCC GCAG GGGGACTGGCACCCGCCAATTGTCC CCGCTGCGGCAAGGG  80 86
CXD94_RS02395  474972 ..  474998 - -23.8  -3.92869   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 66
CXD94_RS02385  470352 ..  470364 -  -4.1  -3.42809   AATACCACCAACGAA                TAACC CAT GGTCA                GGCCGTCTCCAGTTG  49 23
CXD94_RS02380  469581 ..  469638 - -15.6  -3.27408   TCTTACCCAAATAGA CGGTGGCGTGCGCCGCGCTATTCCGTCGC CGG GCGACGG--CAGCGCG-CGCATGGCGCCG ATCCAGGTAAGACAG  80 75
        msrP  468579 ..  468595 -  -2.1  -3.16564   TGGGGACCTCAGTAA              TTGGCCC GCA GGTCCAG              GCCCTGGTAGAGGCT  42 2
        msrQ  467702 ..  467736 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS02355  465497 ..  465528 -  -5.1  -4.03234   GTTGCGGCATAGAAA      GCTGACGCCCGC GGCCGCCAG GCTGGCG-CAGC      TGGTGCGCGACCTGA  63 77
CXD94_RS02345 NONE
CXD94_RS02340  462539 ..  462588 - -13.5  -3.96148   GTTTTCCACGATAAA CGGCTGGCCCAGCGCCGCGGCCA GCTTTT CGCCCGCGGCGC-GGGCG-GCCA CGTCGGTGGCCTGGC  84 219
CXD94_RS02330  461460 ..  461477 -  -2.7  -3.14132   CTGCTGCTGGACGAA             GGCAA TGCCTATC TTGCC              GCGGGCCTGGCCGGC  43 303
CXD94_RS02320  460097 ..  460142 - -10.4  -3.05384   CCCTTGCCCATGTAA TGCGTGACGCGCTACTTAAC TTGGGC GAATAGTAGCGCGTGACGCA TTATATAAGAATGAG  60 117
CXD94_RS02315  456682 ..  456692 -  -3.2  -3.59979   GTTGGGCATGGCAAA                 CTCC TGA GGAA                 GGCAAGAATAGGATT  49 39
CXD94_RS02310 NONE
        pruA NONE
CXD94_RS02300  452458 ..  452471 -  -5.9  -3.34947   CAACAAGGCCCACAA               CCGGC ATCA GCCAG                GCACGCATGCGGCGA  52 384
CXD94_RS02290  451595 ..  451629 - -22.3  -3.53012   CTGCGTTGCGCCAAA    GACAAAGGCCGCCCGG CATG CCGGGCGGCCTTTG-C     GGGCAGCGCGCCTAG 100 42
CXD94_RS02285  450520 ..  450530 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS02280  449498 ..  449537 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTTGTCCAGG  64 4
CXD94_RS02275  448273 ..  448286 -  -5.3  -2.83403   CGCGCGGCAGGAAAT               GAAGA AAGG TCTTC                TCGCCATGCCGCCGG  46 206
CXD94_RS02250  441668 ..  441698 - -12.5  -3.29144   CCACGTGCCGTACAA       GGGTACGTCGGCC GCGCT GGCCGACGTGGCC       GGGGGCGTCGTGCAA  70 423
CXD94_RS02225  437094 ..  437104 -  -6.8  -3.51825   GGACTCGAACGAGAA                 TGCG TTC CGCA                 TGGCGGCGTCGATGG  58 378
CXD94_RS02215  434192 ..  434204 -  -6.2  -3.60792   CCTCGAATGGTGAAA                CGCC GGACA GGCG                GGATCTGTGGAAAGT  56 89
CXD94_RS02210  433783 ..  433803 -  -2.5  -3.13906   GCTAACGGAAAACCA           CCCGCCGA CGCACC CCGG-GGG            AGACCCGCCCTTGAC  42 46
CXD94_RS02205  433214 ..  433239 - -18.3  -5.42862   ACAGGCCGAAAAAAA         GCCCCG-CGGCC TGC GGCCGGCGGGGC         GTGTACGGCGCCGGG 100 51
CXD94_RS02200  432364 ..  432392 - -10.3  -3.55444   TCTGGATGGGGGAAA       GCGGCCGGC-CGG GCTTG CCGTGCCGGC-GC       ATTGGTGTCACTCTA  67 89
CXD94_RS02185  428130 ..  428147 -  -3.3  -3.08464   CTACCACTGAGCTAA             CCACCCC GAAA GAGGCGA              AATTCTAGCACGAAA  44 73
CXD94_RS02180  428018 ..  428052 - -19.5  -3.54489   GGAAGCGGAAATGAA    GAAGGGCCGGT-GCTT TTGC AAGCGACCGGCCCTTC     TGGGATGCTGGTGGG 100 34
CXD94_RS02175  427504 ..  427530 - -11.5  -2.78384   CGTTGTTCGACGATA         GCCCAGGCCTG GCGCA CAGGCCCGGGG         ATGCGCACAGACAGC  62 101
CXD94_RS02170  426054 ..  426099 -  -7.4  -3.86822   GAAGCCTTCGAGAAA CTGGGCGCGCCGCC--CCTGCC CGAG GGCAGGTAGGCGGCTGGCGCCG GGCTAGAAGAAGCTC  66 28
CXD94_RS02145 NONE
CXD94_RS02140 NONE
CXD94_RS02130 NONE
CXD94_RS02125  416967 ..  417004 - -14.7  -3.15699   ACGCATCTATGAAGA   TGCCGTGGCCGACTTCG TACG CGACGCCGGCCGCGGCT    ATGCCGGCCGCCAGG  77 87
CXD94_RS02100  413395 ..  413422 -  -3.9  -2.78996   CATCCTGATCGAAAT        GGGCAGGCCCG TCTGCG CGCGCCGTCCC         GCGAACCGCCGCTGC  41 41
CXD94_RS02095  412316 ..  412354 -   -13  -3.52093   ATATTGGAACCATAA   TCCGCGGCACCCGGCCCA TAT TGCATCCGGCGCCGCGGA   TTGCGGGCGGGCCAT  77 53
CXD94_RS02090 NONE
CXD94_RS02085 NONE
CXD94_RS02080  408609 ..  408619 -  -5.4  -2.94924   CCTGGATGGAGAAAG                 CTCT ACC AGAG                 GCTCATTCCTTGTAC  47 28
CXD94_RS02075 NONE
CXD94_RS02070  405920 ..  405948 - -11.7  -3.81755   ACGCGTGAAACAGAA        GCAGGGTGTTCAC GAT GTGAACACCCAGG        GACGGGCGCCGGCTT  79 59
CXD94_RS02065 NONE
CXD94_RS02060 NONE
CXD94_RS02055  402634 ..  402650 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  60 494
CXD94_RS02040  399697 ..  399721 -  -9.2  -3.64822   ACCGGTGTAGCCAAA         GCGGGCCAGCG TCTG CGC-GGCCAGC          CGCGCGCGCGGGTCG  68 347
CXD94_RS02030 NONE
CXD94_RS02025 NONE
CXD94_RS02020  395165 ..  395221 -  -6.6  -3.14051   TTATTTCCAGGAACA CCCG--CATCCCACCGAAGGCACGAT ACGCACG ACCGCGCCGCCGGTCGAATGGTCGGG CACGCCCGGCGGGTA  50 237
CXD94_RS02000  391773 ..  391783 -  -3.2  -2.78816   TCATCGGCCATGACA                 CATC GCT GACG                 GGGTTTGGCGGCGGG  40 151
CXD94_RS01985 NONE
CXD94_RS01980 NONE
CXD94_RS01975 NONE
CXD94_RS01970  387551 ..  387563 -  -3.3   -3.6968   CGAGAACCCCAAGAA                GCTGA AGT TCCGC                GAACTGGAAGCCGCC  55 436
        argB NONE
CXD94_RS01955  385128 ..  385160 - -11.9  -3.09635   AGGTGGAGTAGGGAA      CCCGTCGTCAGCCGC GCA GCGGGCGACGACGCA      ACAGCAAATCACTGA  66 0
        slmA NONE
CXD94_RS01945 NONE
CXD94_RS01940 NONE
        gatC NONE
        gatA NONE
        gatB  372158 ..  372176 - -10.2  -2.62515   AATCGGTCGAGATCA             TCCGCGCC GCC GGCGCCGA             GCCCGCCGCGGTGCT  55 359
         xth  370497 ..  370508 -  -7.2  -4.25104   TTCGTCGGACGAAAA                GCCG GAAT CGGC                 CGCAAAACCAGTGCT  72 313
CXD94_RS01885  368713 ..  368742 -   -18  -3.93262   CCCAACAAATGGAAA       TGCCGCTGACCA TCGTGC TGGTCAGCGGCA        TGATCACCGGGTGCG 100 313
CXD94_RS01870  366054 ..  366097 - -11.6  -3.15544   GGTCAGGCGCATCAA GACCGGCG-CCGGCGCGCA TGCGTTC CGCGCGCAGGGCGACGGCC GCCATCTGTTCGTCA  64 284
CXD94_RS01830 NONE
CXD94_RS01825  356974 ..  356984 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CXD94_RS01820  355753 ..  355797 -    -4  -2.78463   AGTGGCGCGAGCAGA CGCTGTCCGAAGCGGGCGAC CTGGT GCTGGCCGCGCCGGATACCG GCCTGGACGCCAAAG  40 198
CXD94_RS01795  353459 ..  353493 -    -4   -4.9792   CATTTTAGATAAAAA     CCGCGCGCATGCAACC GGT GCCTGCCGGCGCGCCA     GCGCCGACGGCCCGC  79 115
CXD94_RS01790 NONE
CXD94_RS01785  351839 ..  351852 -  -2.3  -2.64616   TTCCCATCGAGAGCA               GGCAC GAGC GTGCT                TGTGCTGTCGATGAC  38 120
CXD94_RS01780 NONE
CXD94_RS01775 NONE
CXD94_RS01770  347167 ..  347219 - -16.2  -3.05844   TCGGCCAGCGGAATA TGCACCGCGCCGCTGGCGGCGG CGAGAATGC CCACCGCCAGCAGGGCAGCGCC CAGCGCCAGCAGCAG  79 60
CXD94_RS01765 NONE
CXD94_RS01760  345449 ..  345474 - -11.9  -3.57144   TGCGCCACCTCGAAA         CCGGCGC-CTGA GGT TCAGCGCGCCAG         CACCAGCAGGCGGCC  72 14
CXD94_RS01750 NONE
        alkB  343433 ..  343449 -  -9.3  -2.52464   TTGCGGCCGAATTCA              GGCGCCG GCG CGGCGCA              GCGTGAAGTTGATGC  54 6
CXD94_RS01740  342818 ..  342828 -  -8.2  -3.53012   TGCCGGCGTTGCAAA                 CGGC TCA GCCG                 GCCTCGCGCAACAGC  62 19
CXD94_RS01735  341247 ..  341264 - -12.7  -3.06915   AGGGACGCTACGCAA             GCCGGCT GGTC AGCCGGC              CCGAGCATCGCGACG  66 346
CXD94_RS01710 NONE
CXD94_RS01705  337112 ..  337126 -  -8.5  -2.56596   GTCGGGAGCAATCTA               CGCGG GTCGG CCGCG               CGCTGTCTGTTTACT  52 64
CXD94_RS01700 NONE
CXD94_RS01695 NONE
CXD94_RS01690 NONE
CXD94_RS01685 NONE
CXD94_RS01680  332183 ..  332217 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS01670 NONE
        lptG NONE
CXD94_RS01660  327983 ..  327995 -  -4.7  -3.01712   CGTTCGTGGCCAAGA                GCGAG ATC CGCGC                CTGGCCGGTCATCGG  46 510
CXD94_RS01625 NONE
CXD94_RS01620 NONE
CXD94_RS01615  321220 ..  321258 - -10.2  -5.80951   ATCCAAAACAAAAAA   GTGAAGCCCATCGGATCG TAA CAATCCGATGGGCCGGGC   CCTGCCCGTCGCGGC 100 45
CXD94_RS01610  318910 ..  318922 -  -2.7  -2.80074   GTTTTTACAAGAGGA                TCCAT GAC ATGAA                AATTCTGCAACCGCC  39 516
CXD94_RS01545 NONE
CXD94_RS01540  305078 ..  305094 -  -9.3   -2.7185   ATCATGGTGGAATTA              TGCGCCG GGC CGGCGCC              GGCGTGGCCGGCCTG  55 41
CXD94_RS01535  303869 ..  303903 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CXD94_RS01525  302714 ..  302729 - -11.8   -5.4505   TTGGCCAACAAAAAA              GCCGCC CGGA GGCGGC               TGGAAGGTCGGCTTC 100 42
CXD94_RS01520 NONE
CXD94_RS01515  300767 ..  300790 -  -3.1  -3.51934   CCTGGCTGAGAAACA          TCG-AGCCGA ACTTG CCGGCCCCGA          TCAACGCCACCCGCA  49 219
CXD94_RS01500 NONE
CXD94_RS01485  293181 ..  293211 -  -8.8  -2.66316   GCGGCGAGCAGATCA       CCGCCGTGGCGCTG GAC CTGGGCTACGGCAG       CCCGGGCGCCTTCAC  51 151
CXD94_RS01475 NONE
CXD94_RS01470 NONE
CXD94_RS01465 NONE
CXD94_RS01460  288029 ..  288039 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS01455  286674 ..  286702 -    -6  -3.08679   CCGCGTGATGGAAGA       CATCGTGCGCACGG GCG CCGTGCGG-CG-TG       GCTGGTTCGGCATCG  48 348
CXD94_RS01445  284947 ..  284973 -  -7.9  -3.23853   CCGCCGCAAGGAAGA        GGCCGCGCCGGA AGCG CCCGCCGC-GCC         GCCGGAAGATGTCAC  53 114
        petA NONE
CXD94_RS01430 NONE
CXD94_RS01425  281348 ..  281379 - -18.8  -3.94846   GTATGAAAAGCGAAA      GGCCAGCGCC-GCCA AAT TAGCAGGCGCTGGCC      CCGATTGCCAGGCGG 100 123
CXD94_RS01420 NONE
CXD94_RS01415  280176 ..  280200 - -17.2  -3.16191   CTACACCGGCATGAA          CGCAAGCGGC GCATG GCCGCTTGCG          AGGGACTGCATTGTA  84 73
CXD94_RS01410  280056 ..  280076 - -13.3  -5.07011   TACATAAACGAAAAA            GCCGTCTCC AGA GGAAACGGC            CTAGATCGTTGATTT 100 44
CXD94_RS01395 NONE
CXD94_RS01390  277806 ..  277845 -  -8.6  -3.02144   TCAGCGCCGCCAACA  CCATGCGCCTGG-ACAACA TGG TGCTGTACCAGACGCCCAG  CCTGGATGGTTTCAA  55 372
CXD94_RS01320 NONE
CXD94_RS01315  263596 ..  263611 -    -6  -4.07618   GCCGCAACAAGGAAA              CCGAGC TCGA GCGCGG               CACGGCGCTGGAAGC  66 190
CXD94_RS01305  260972 ..  260987 - -11.8  -3.57144   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC  72 46
CXD94_RS01295  258815 ..  258837 - -12.7  -3.24747   GGGCGACATGACCAA          CGCGCGCCGC TAGA GCGGCGC-CG           GGCGCGTCAGTTGGG  71 32
CXD94_RS01285 NONE
CXD94_RS01280  255293 ..  255330 -    -9  -3.35679   CGCGGGCAGTGAGAA   GCGGGCGCCCGTCCCC GTTGGG GAGGAGCGACACCCGC    GGCAAGGGTGCCTGT  63 127
        mutL NONE
        miaA  251703 ..  251732 - -23.7  -2.78816   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 30
CXD94_RS01255 NONE
CXD94_RS01250 NONE
        pcnB NONE
CXD94_RS01240  246912 ..  246925 -  -4.5  -3.38326   CAGAAGCTGAACGAA               GCGTCG GCG CG-CGC               GCTGAACACGCCGGC  49 189
CXD94_RS01220  241339 ..  241370 - -15.9  -3.76413   TTGCAAAATGGGAAA      GGCATCCGGTGCG TGCGAG CGCACCGGACACC       ATTGGACGGCCTGCG  90 42
CXD94_RS01215  240358 ..  240368 -  -2.4  -3.29144   CGACCTGGCGCACAA                 GGAC CTG GGCC                 TGGCGCTCGAACTGG  44 257
CXD94_RS01195  237376 ..  237386 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS01190  236255 ..  236269 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
        thiC  230322 ..  230336 -  -8.5  -3.02263   ACACCTCGGTCAAGA               CCGCC TACAC GGCGG               CCTGACCCGCATGGC  55 72
CXD94_RS01145 NONE
CXD94_RS01140  225085 ..  225134 -  -9.8  -2.82015   GCCATAGGCAGCATA TCGGCGACGGCGGCGCC--GCGGA TTTT CCCGCTTGGCGCGGCCGACGCGGC GCCGGTAGGCATCGC  56 396
CXD94_RS01130  223523 ..  223535 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTACCCGGACTGCCG  50 368
CXD94_RS01120  219866 ..  219894 -  -2.3  -4.92756   ATGATCAAAAACAAA        TCATCCTGGGACG CAG CGCCTCAAAATGT        TGGGAGGCTTCCGGG  76 237
CXD94_RS01115  216602 ..  216631 - -23.7  -2.78816   TCATGGCGCATGACA       GAGCGCCTGTCCC CGTG GGGACAGGCGCTC        TTGCCGCTGGTGTCG 100 111
CXD94_RS01110 NONE
CXD94_RS01105  213854 ..  213867 -  -3.7  -3.33696   GGGCTCCGTAAGGAA               GGCGC GGCG GCGTC                AGTGGGTCAGGTAAC  47 24
CXD94_RS01100  213040 ..  213073 - -12.4  -2.82519   CGAGCACATCAACCA    GGCGCTGCGGCGCCGC TGAG GCGGCGC-GC-GCGCG     ATGCGCGAGCAGGCG  66 61
CXD94_RS01090 NONE
CXD94_RS01085  210715 ..  210735 - -19.7  -4.11216   CTTCGATCGGTAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGGCGTTCAG 100 37
        catC NONE
CXD94_RS01075 NONE
        pcaD NONE
CXD94_RS01065  207925 ..  207937 -  -4.7  -3.73068   GGCCGAATGCAACAA                GTCGG CAA CCGGC                AAGACCGGCGACGAG  58 310
CXD94_RS01035  202853 ..  202863 -  -8.2  -3.28712   GGCGCGGGTGGACAA                 CGCC TAT GGCG                 ACCGCAACCTGGTGT  59 217
CXD94_RS00985 NONE
CXD94_RS00980 NONE
CXD94_RS00975  189325 ..  189337 -  -4.8  -3.41051   GCAGTTCGACGAGAA                GTCG TTCGT CGAC                TTCAAGGGCGATGTC  52 372
CXD94_RS00950  181960 ..  181989 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGT GCCACGGCGGCGCT       GCAGGGGCCGGCGGG  91 50
CXD94_RS00945  179651 ..  179677 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GTG GCGGGCCGGCGG         CGGCGCGCTCAGCGC 100 34
         bfr  174611 ..  174632 - -17.3  -3.75629   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG  91 63
CXD94_RS00885 NONE
CXD94_RS00880  167979 ..  168034 -  -6.7  -3.15544   CGCTATCCGCACGAA TTCTCCGGCGGCCAGCGCCAGCGC-AT CTGC ATCGCGCGCGCGCTGGCCACCCG-GCC GCGCTTCCTGATCTG  52 330
CXD94_RS00870  165586 ..  165643 -  -2.7  -4.11484   CTGAACTCTTCAAAA CCATGGAAGCGGTGCGCTGGAATAT-GG CGT CCGATATCCCATGGGACGACTTCGACGG CAGCAAGCTGTCGGA  59 327
        phoB NONE
        phoR NONE
CXD94_RS00830 NONE
CXD94_RS00825  156674 ..  156701 -  -2.7  -2.66316   CGGCCGACGATAGCA       GGGCG--GGACTG ACCT CAGTCTGTCGCCC        GGATTACGCGTTTGT  39 12
CXD94_RS00820  156038 ..  156050 -  -7.7  -3.78934   TTGCCTGTACAACAA                GGGTT GAA AACCC                CCCCCCCATTGTGGA  66 96
CXD94_RS00815  154545 ..  154560 -  -3.2  -3.73775   TCGAGCTCGACGAAA              TCGACG CCAT CGCCAA               CCTGGTGCGCCACGG  55 282
CXD94_RS00805 NONE
        pxpB NONE
CXD94_RS00795  151135 ..  151157 -    -9  -3.01712   TCCGGTCGGCGAAGA           CTTCCTGCGC CGC GCGCAGGCCG           ATGGCGCGGGCAGCG  57 495
CXD94_RS00780  148889 ..  148901 -  -5.5  -3.01712   GCGGCGCCGCCAATA                CCGCA TCC TGCGA                TGATGACTCGCATAG  47 112
CXD94_RS00770 NONE
CXD94_RS00765 NONE
CXD94_RS00760  144575 ..  144616 -  -9.2  -3.72027   AGCGCCTACGAACAA TGGGCGGGCGACGC-CGGC GACGA GCCGGGCGACGACCGCCTG CGCGTCGCGTAGGCC  68 125
        ilvA  137211 ..  137221 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 380
CXD94_RS00730 NONE
CXD94_RS00720  133783 ..  133823 -  -8.8  -3.05715   AATGCCGTTACCGAA CGCCAAGTCCGCGCCTGCG TGGA CGCGGGCGCGG-CTACGCT  GGGCGATCTCCAGTT  55 264
CXD94_RS00705  131505 ..  131524 - -16.4  -3.85165   CAGCGCAAATGTAAA            CGGCGCGC CAGG GCGCGCCG             TCAGGCCGGTCCGGG  91 55
        leuA  129069 ..  129097 - -16.7   -3.1372   GACCGCCGAGCAATA        CCTGGCCCACCTG GCG CAGGCGGGGCAGG        CGCGCGCGAAAGTGG  80 355
CXD94_RS00685 NONE
CXD94_RS00680  125744 ..  125788 - -17.8  -3.19653   CCAGAAGGCCAGGAA CAGCGCCGCGGCCGGC-GCAG CGAA CAACAGCCATCCGCGGCGCTG CATATCAATTCACCT  86 30
CXD94_RS00670 NONE
CXD94_RS00665  123176 ..  123186 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CXD94_RS00660  122098 ..  122126 -  -2.9  -3.30701   TTCCAGGAAATTCAA        TGGGCCGCCAGCA CCA CGCTGACGGACTG        GCCGGTCTGATAGGT  46 71
CXD94_RS00655  121222 ..  121243 - -10.8  -2.84325   GCGGTGCAAACATGA           CGCCGCCA TGTCAG CGGCGGCG            CTTGTTTCACTCGTC  61 32
CXD94_RS00650  120112 ..  120126 - -12.8  -3.48276   CGGTGGTTCACAGAA               CCGCCG CGT CGGCGG               CGAAGAAATGCTGTC  73 3
CXD94_RS00645 NONE
CXD94_RS00640 NONE
CXD94_RS00635  116911 ..  116929 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 182
CXD94_RS00615 NONE
CXD94_RS00610  112261 ..  112275 -    -7  -2.90714   TTAAAGCGTTACAGA               CTGCGG ATG CCGCGG               GGAAGTTCCATGGCG  50 43
CXD94_RS00605  111548 ..  111567 - -11.4  -4.08144   CCCATCAACGACAAA            GCCTCCGC ATGG ACGGAGGC             TTTGTGGCGTCGGGG  82 60
CXD94_RS00590 NONE
        rfbB NONE
        rfbD NONE
        rfbC  105870 ..  105905 - -16.1  -3.14878   GGCGTCAACTGAAGA    CGCGCGGGCCGCTAC GCATAG GTATCGGCCCGCGCC     AGCGCCACGCCCTGG  81 1
CXD94_RS00520 NONE
CXD94_RS00515 NONE
CXD94_RS00510   95126 ..   95159 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATT GCGGCGGGGGCGGCG      CTGCGTGCGCCCGAC  52 204
CXD94_RS00495 NONE
CXD94_RS00490 NONE
CXD94_RS00485 NONE
CXD94_RS00480 NONE
CXD94_RS00475   87784 ..   87799 -  -7.5  -2.62515   AATTCTCGCAGATTA              GCGCG AGGCTG CGCGC               CGTGGCGTGACAGAT  50 7
CXD94_RS00470 NONE
CXD94_RS00465   85836 ..   85859 -  -9.4  -3.53012   GCGTTGGTGCGCAAA          GGCGCGACAC TGCC GGGGCGCGCC           ATTGAGTGCGAGTCA  64 107
CXD94_RS00460 NONE
CXD94_RS00455   83803 ..   83824 -  -7.9  -4.62302   GAAGAGCCGGAAAAA           CCCAGTGCG ACGG CGCACAAGG            CCAGTGGCGTGGATA  81 73
CXD94_RS00445   80530 ..   80544 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 131
CXD94_RS00435   78375 ..   78401 -  -8.7  -4.07568   CTCGCTGCTGGAAAA         GCTGCCCGC GCAGCTCCA GCAGGCAGC         CGGCCAGCTGCAGGG  72 308
CXD94_RS00425 NONE
CXD94_RS00420 NONE
        ampD NONE
CXD94_RS00410   74431 ..   74462 - -10.1  -3.25823   GGTGCTGGAGATCAA      CCCGGACCACGCGC TGGTC GCGCG-GATCCGCG      ATGCCAGCGATGCGG  63 318
CXD94_RS00400   72248 ..   72270 - -12.6  -2.82742   ACGCTTTTATAACGA           CCGGCGCCCG CAT CAGGCGCTGG           GCATGAAGACTCCGG  66 195
CXD94_RS00375   68040 ..   68050 -  -8.2  -2.54655   AAAAGGCCCAACCCA                 GGGG TAC CCCC                 AAATTGATGATCCAT  52 507
CXD94_RS00365 NONE
CXD94_RS00360   65549 ..   65562 -  -5.3   -3.5323   AACTTCAAACAAAAC               TATCG CACT CGATA                TCAAGCGCATCGATC  54 1
CXD94_RS00355 NONE
CXD94_RS00350   64333 ..   64359 -  -4.3  -2.78384   GCGCGGCCCATGATA        TCCGTGCCC-CC ACCG GGTGGGAACGGT         ACGACCAGTGTAATA  43 189
CXD94_RS00345   63110 ..   63132 -  -8.4  -4.09685   GGTGATGGCGTAAAA           GGGCATAGCG ATC CGCTATATCC           AGCCTGGCAAGCCAA  72 385
CXD94_RS00335   62036 ..   62047 -    -3  -5.30348   ACTTAACAATAAAAA                TTCA AATA TGAA                 TGTTTAATTTAGTTA  89 105
CXD94_RS00330 NONE
CXD94_RS00325   59949 ..   59979 -  -5.3  -3.73068   GGTCGAAGCCAACAA       CCCCACCACCAGC ATCCA GCTGGTCGTGGCC       GGCATAGGGCTGGGT  57 344
CXD94_RS00315 NONE
CXD94_RS00310 NONE
CXD94_RS00305 NONE
CXD94_RS00300 NONE
CXD94_RS00295 NONE
CXD94_RS00290   54428 ..   54450 -  -4.8  -3.76482   CGACACCAGCAAGAA           CCTGGTCG AGGAAGG CGACAAGG           GCAAGCGCTACGCGC  58 247
CXD94_RS00245   46286 ..   46321 -  -2.4  -4.16842   TTCATGCTCAAGAAA    CGCGTGCGGATCCTG TGGCAGG CCGGCTGCGC-CGCG    CTGCTGCTGGCCGCC  61 474
CXD94_RS00225   44315 ..   44355 - -20.6  -3.53012   GTCTTGGCCGTCAAA CCG-CAGTGTGCCTGTCCC AGCG GGGACAGGCACACTGGCCG  CAGTTGGGACAGGCA 100 66
CXD94_RS00185   36625 ..   36643 - -13.1  -2.84298   GACAGTTCACAACTA             GCGCGGC GCCTG GCCGCGC             GGCAGCCAGTGCCAG  69 4
CXD94_RS00165   32037 ..   32050 -  -3.7  -2.70932   TCTCGCCGCGAATCA               TCGCC TGGC GGCGG                ATCCGGCCAGCATGG  41 94
CXD94_RS00160 NONE
CXD94_RS00155 NONE
CXD94_RS00150 NONE
CXD94_RS00145   29336 ..   29346 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CXD94_RS00140   27908 ..   27924 -  -5.8  -3.53012   TGCGCTGCCTGCAAA             GC-GGCG CGGA CGCCTGC              GTGCCCCTGCCGGCC  55 433
CXD94_RS00125   25093 ..   25117 -  -7.7  -2.97021   TCGGCAAAGATGATA          TCCAGGCCCAC TGC GCGGGCCTCGC          CCAGCTTGTCCAGCA  53 310
CXD94_RS00110   21737 ..   21791 - -13.2  -3.07344   GGACGCTGCAACAGA CGCGCAGGCCGAATCCGAGGCCGCCG CGA CGCCGGCACCGGCCGCTGCCCGCGTG ACGGTACGCATCAAC  69 178
CXD94_RS00100   20076 ..   20099 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 53
