CX034_RS00015    3394 ..    3417 +  -6.8  -2.96979   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCTGTTCC  51 16
CX034_RS00020 NONE
CX034_RS00025    5210 ..    5241 +  -3.6  -3.14344   ACGCGGCCAGCGGCG      CTTACCG-CGCCG GCTCGTA CGGCGTCGGGCAG      TTGCTGGCGGCCGTG  45 103
CX034_RS00035    6413 ..    6434 +  -7.3  -4.09685   CTCAGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  67 116
CX034_RS00040 NONE
CX034_RS00045    6668 ..    6680 +  -2.7  -3.65046   GTCATGGGCACCATC                GAATT CTA AGTTC                TTCTTCAAGTCAGAA  53 28
         tuf    7926 ..    7960 + -18.1  -3.72893   AAGGCGCGGTTTTCC    CATGGATAGAGGGGCC GGAT GGCC-CTCTATCCATG     TTTGCTGGAAAAGTA  93 39
CX034_RS00055 NONE
        secE NONE
        nusG    9056 ..    9074 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CX034_RS00075   10300 ..   10321 + -14.5  -2.62184   ATAGAACTTTGGGCC           GCATCCGGA CTTG TCCGGATGC            TGCTGTCAAAGACCG  71 55
CX034_RS00080   11043 ..   11056 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG CGTC CGGAA                TTCGCTGAACGACAA  41 31
CX034_RS00085   11517 ..   11549 + -17.7  -4.35524   AGACCTCGCGTCGAC      GCCCGGGGACAGC GCTCTTA GCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 40
        rpoB NONE
        rpoC   20076 ..   20099 + -16.8   -4.4078   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 83
CX034_RS00105   22150 ..   22174 +  -3.4  -3.02144   AGCCCCAGGCCAGCG          CCGCCTACTT CGTTC GAGCCGGCGG          TGTTGACGCGCGTAA  42 228
CX034_RS00125   27452 ..   27486 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS00160 NONE
CX034_RS00165   34454 ..   34511 + -16.7  -3.53224   ACCTGATGGCGCTGT GCGAACCCGCGCCATGACGCCGGGCCGG CGC CCGGCACGGCCCCGCGGCCCGGGC-CGC TTTGCGGGCCGACTA  86 9
CX034_RS00170 NONE
        glyQ NONE
CX034_RS00185 NONE
CX034_RS00190   40595 ..   40613 +  -2.2  -2.53015   CAACTGCTGCAGGAG             GCCTGATC CAT GGCCTGGC             TGCGTTCGGCGCTGT  37 20
CX034_RS00195 NONE
CX034_RS00200   42211 ..   42236 +  -5.9  -3.74693   CCCTGCCGCAGTTCT         GAGCCCGCGCC GGCT GGCGCGGCCGA          TTTGCTACGATGACG  59 24
        gloA NONE
CX034_RS00210   43600 ..   43610 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  57 407
CX034_RS00220   45098 ..   45110 +  -6.2  -2.71144   GGCCACGCCCGGGGC                CGCC GGCCA GGCG                TAATTGGCCAGGCTG  47 509
CX034_RS00230   46039 ..   46051 +  -6.2  -3.96531   AGTCTCGATTCGTGG                CGGC ATCAA GCCG                TTTATCCATATCTGA  64 315
CX034_RS00240   47473 ..   47511 + -10.9  -3.14132   GGGCCAGGTTGATCT  CCAGCGGCGCGGCGGC GCGGGAAG GCCGCCGCGAC-CGGG   TTGGTGCCCAGCAGC  64 520
CX034_RS00250 NONE
        metW   50078 ..   50088 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 97
CX034_RS00265   51098 ..   51113 +  -3.2  -2.70932   TCACAGCTAGCAGGA              CCGG CGCGCCTA CCGG               TCGTTCCACGGGAGA  40 31
CX034_RS00270   52437 ..   52452 +  -7.5  -3.14527   CGCTACCCGCGCAAG              CCGCC CGCAGT GGCGG               TATTGATAACAATTC  54 71
CX034_RS00375   70070 ..   70080 +  -4.6  -3.07013   CAAGCATGGACGCAT                 GTCG CAA CGGC                 TGTATTGACCCAGTG  45 59
CX034_RS00380   70668 ..   70678 +  -4.6  -3.10464   ATTCAACAAGAACAC                 CGTG CAG CGCG                 TGTTCCAGTTGATGG  47 249
        htpG   73562 ..   73594 +  -6.8  -4.08767   ATGCGCTCGATCAAG      GGGTGGCTGTCCCC GCGCG GGGGGCTGACACCG      TTTTGGCAGGCTGGC  67 43
CX034_RS00420   77804 ..   77838 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS00430   79792 ..   79808 +  -2.1  -4.07568   AGTCTTCCCCGATCA              GCAGTTC TTC GTACAGC              TTTTCCCCGGGCCGC  58 213
        waaC   92972 ..   92998 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ACA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CX034_RS00495   94274 ..   94284 +  -8.2  -3.14132   ATTGGCTGGGATAGC                 CCGC CGT GCGG                 TTCGTCAGGGCCGCA  56 27
CX034_RS00515 NONE
CX034_RS00520   98558 ..   98572 +  -4.2  -5.01732   CATGCCGGCCACCAT               CCCG CTGCGGC CGGG               TTTTTTCCAGCGCTT  81 404
CX034_RS00530 NONE
CX034_RS00535  100410 ..  100423 +  -2.4  -3.51934   TGACCCGGCCCGCGT               TGCA TCACGT TGCA                TGTTTGTAAGCGCAA  48 38
CX034_RS00540 NONE
CX034_RS00545  102743 ..  102768 + -13.2  -3.61178   CTGTAGCGGCCGGCA         GGCGGGCGGC CCTGGC GCCGCCCGCG          TTTCGCGTCCCTCGC  77 35
CX034_RS00550 NONE
        lipB  103778 ..  103800 + -12.7  -3.31792   CTTTTTTGTCTCGAA           CCGGAGCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  71 49
        lipA  104853 ..  104873 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
        metC  110499 ..  110518 + -10.7  -3.89346   CCCATCAACGACAAA            GCCTCCG CATGGA CGGAGGC             TTTGTGGCGTCGGGG  77 53
CX034_RS00610 NONE
CX034_RS00615  114737 ..  114765 +    -6  -3.78419   GTCCGCAGGGGGACT        GGCACCGG CCAAATCCGACCT CCGGTGCC        TTGTATCTTTCCTCC  62 100
CX034_RS00620  116017 ..  116032 +  -5.4  -2.72991   CCATGCTCCATCCGG              GGACAGG CAC CC-GTCC              TCCTTCAGCGTATCC  45 81
CX034_RS00685  128728 ..  128770 +  -5.5   -3.1247   ACGGATCGCCGTCGA TACGGTGGCGGACCAGCTGC CAGG GCTGCTGCTGCGCCAG-GTA TTCGCTGTCGAAGAT  47 466
        rpoN  132587 ..  132602 +  -6.2  -4.30833   CCACGCCGCGGGTCG              TTAGGA CGCC TCCTAA               TTTGTTCCTGATTTC  73 22
CX034_RS00705  132999 ..  133030 + -16.6  -3.96148   GAGCGACGCGGCGCC      TTGCGCCAGCCGGC TCAT GCTGCCTGGCGCAA       TTTATCGTCCCCACA  93 39
CX034_RS00740  142789 ..  142802 +  -5.2  -3.77188   CGGGACGGATCCAGG               GCGC CGCATT GCGC                TATTTATGTTTCAAT  60 70
CX034_RS00745  143562 ..  143582 +  -8.9  -3.96148   GAGCCGGGCGACGAC            CGCCTGCGC GTC GCGTAGGCC            TTTCTCCTCACGACA  70 8
CX034_RS00775  150295 ..  150328 +  -7.4   -3.1505   CGGCCACGCCGGCCA     GCGCGCCGACCTGGT AGACC ACCAGGTCGTAG-GC     TTCCTGCGGGGTGAT  54 510
CX034_RS00800  154063 ..  154084 +  -6.5  -4.28361   GAAGCGCACCAGTTT           C-TCGGCCAC TTC GCGGCCGATG           TTTTCCTGGGATTCC  72 373
        ubiE  160820 ..  160835 + -11.8  -3.53811   AAGGTTTGCCGCGCA              GGCCCC AACC GGGGCC               TTTCCAGCCGCTCCC  72 121
CX034_RS00840  161990 ..  162017 + -19.2  -3.30007   CGGCCGGGCTGCACC        GTGAACCGGCCC GCCA GGGCCGGTTCGC         TTATGGGCCGGTCTT 100 103
CX034_RS00845 NONE
        ubiB  164640 ..  164672 +  -4.8  -3.13403   TCAAGATGAACGCGA     TCACCGAGTGGGCGGC CTT GCCGGCCAC-CGA-GA     TGTTCCTGCGCGACA  47 330
CX034_RS00880 NONE
CX034_RS00885 NONE
CX034_RS00890 NONE
CX034_RS00895  173560 ..  173581 + -17.3   -4.7373   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG 100 48
CX034_RS00905 NONE
CX034_RS00910  175446 ..  175463 +  -6.3  -3.05844   ACAGGTCGTCGGCGA             TCAG-CGC CTC GCGGCTGA             TCTTGCGCTCGGGCG  49 219
CX034_RS00920  176974 ..  176984 +  -6.8  -2.62735   TGGGCCGCCGGTTCC                 CAGG AGT CCTG                 TCATGTCCGCAATCT  47 104
CX034_RS00925  177786 ..  177818 +  -2.6  -3.92324   TGGCGGCGCCGCGTC     CAGCCCC-C-GCGCCG TAG CGCCTTGGCGGGGCTG     TTTACTATTACGCCC  56 9
CX034_RS00930  178707 ..  178751 +  -8.3  -3.92324   GGGTTCGGCCTTCTC GTCGGCGTGGCTGGCGGCCAG CAC CATGCCCTCGGACACGCCGAA TTTCATCTTGCGCGG  70 135
        apbC  182418 ..  182435 +  -3.3  -3.14125   TGGTGGTCCGGCCCG             CCTGACG CATG CGTCGGA              TATTGCGTGTCTGCC  44 21
CX034_RS00950 NONE
CX034_RS00955  188025 ..  188037 +  -7.7  -3.37344   GCGGCGGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  59 49
CX034_RS00960  188816 ..  188837 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC CTC GTCGGGCTGC           TTCATGTAGCGGGAA  52 216
CX034_RS00980  190652 ..  190680 +    -8  -5.24129   GTCCTACAATTCCCC        GAGGTCGGCCCG CTCGT CGGGCCGGTTGC        TTTTTTGTCACCAGC  95 76
CX034_RS00985  193035 ..  193074 + -33.6  -3.65812   GCAGTAAATCCGACG  CGCCGCGCCGCGCCGCCC GAGG GGGCGGCCCGGCGCGGCG   TTGTCTTCGAGGGAG 100 34
CX034_RS00990  194342 ..  194352 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS00995  195369 ..  195394 +  -4.7  -3.72481   TAGCCTGGCGGGCAC        GGCGCATGCGG GCAGGG CCGC--GCGCC         TATTGTTTTGGTAAA  55 38
CX034_RS01000 NONE
CX034_RS01005  197008 ..  197023 +    -6  -3.55444   AACAGGGGCGGATCG              GCGCCC ATCC GGACGC               TTTGCGGCATGGCGC  56 49
        gcvT  198501 ..  198524 +  -7.4  -3.97368   GGCTTCCGCGCGGCC          GTTGGC-CGCC GGA GGCGCGCAAAC          TTTCTCCATTCCCAC  68 47
        gcvH  198958 ..  198978 +  -8.1  -3.90744   CAACGGGCCGGCCCG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAAAAC  68 48
        gcvP  201878 ..  201923 +    -9  -3.75665   GTGCGCGCTCATGGC GCATGACGAGGTGCCTGTCCCC CCAT GGGGACTGGCACCT-G-CAAGA TTTCATGGCGTCTGC  68 44
CX034_RS01030 NONE
CX034_RS01035  205408 ..  205444 +  -6.6  -4.26019   CTTCGGCCTGTGCCT   GTGCGCCGACCTGGTG CTGGCCA CGCCAG--CGGCGCGC   TTTTGCCTGTCGTTC  70 411
CX034_RS01045  206615 ..  206650 +  -3.2  -3.56568   GTGGCCACTTGTGCC    GCAATGCGC-CAGCAGG GAA CTTGCTACGCGCATCGG    TTTGGCAGATCATTG  49 54
CX034_RS01050  207522 ..  207533 +  -7.2  -3.60098   GGGCTTGCCGTTCAT                GCCG ACCA CGGC                 TTTGGCGTAGCCGGT  60 481
CX034_RS01085  212334 ..  212348 +  -4.2  -3.72893   CAGGGTGCGCGTCAG               GCCG ATCAGCC CGGC               TTTGGTCGCCGAATA  55 352
        queC  222889 ..  222902 +  -4.5  -2.82623   GCATCAGGACGGTGT               CGCGCC ATT GGC-CG               TGCTTGTAGCCCACC  44 126
CX034_RS01125  224420 ..  224454 +  -8.4  -2.84298   CCTCCAGGCATCGCC     GCGCGACTGAGCCTGG CGC CCGGCCTGCGTTGCGC     TAGTTGTGAACTGTC  54 16
CX034_RS01140 NONE
CX034_RS01145  227802 ..  227823 + -18.7  -3.41051   ACGACTTTGCTGTGC           CGGGCGCCC CTTG GGGCGCCCG            TTGTCCTACCCGTAG  93 80
CX034_RS01150  229388 ..  229410 +    -4  -4.18018   CCACCGCCTTTTCCT           GCATGCCCTG CTG CAGCGCGTCC           TTTTCGCTGACGCCC  63 123
CX034_RS01160  232169 ..  232188 +  -5.6   -4.7497   GGCCGGCGCAACCGG            GACAGCCT TGCG GGGCTGCC             TTTTTCATGGATGGG  81 64
CX034_RS01165  233273 ..  233283 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 76
CX034_RS01170  234263 ..  234308 + -13.5  -3.14132   CAACCTGGACGAATA CAACCTATTGACAGTTCACAG CTAG CTGTGATGTCTCAATAGGTTG TTCATCCAGGCCGGA  72 1
CX034_RS01175  235490 ..  235524 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS01195  238817 ..  238855 +  -7.3  -3.14229   AGGCGGCGCTCGAAG  GCGCCGACGGCGCCC-TGC AGG GCATGGGCCCGGGCG-CGC  TGTTCATCAACATGT  52 315
CX034_RS01215  243994 ..  244012 + -11.6  -3.04144   ATCATCCATCCCACG             GCGCCGGC GGC GCCGGCCC             TGTTCGCGCTGGCCG  65 367
CX034_RS01225  246015 ..  246062 + -10.4  -3.01712   AAGGCAATCTGCAGC CCTGACCAGGGGAGCCGCTGCCC TCA GCGCAGCGGCTCGA-TGGCCTGG TCTTCCAGCGCGGCC  60 21
CX034_RS01250  250652 ..  250681 + -23.7  -3.18264   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 97
CX034_RS01265  254285 ..  254314 + -23.7  -2.62616   CGACACCCGCGGCAA       GGGTGCCTGTCCC AGCC GGGACAGGCACCC        TGCTGTACGCCATCG 100 72
        fumC  257780 ..  257792 +  -4.7  -2.52464   GCGCGCCGCTAGAGC                GGCGC CGG GCGCG                TCAGTTGGGCGCGCC  42 29
CX034_RS01290  259921 ..  259936 + -11.8   -5.4505   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC 100 54
         ggt  263106 ..  263125 +  -5.6  -4.36914   CGCCAGGAAGATCGG            CCCGGCGCC GGT GG-GCAGGG            TTTTATACGGCGCGA  69 414
CX034_RS01320  266940 ..  266957 + -14.1  -3.84451   GTCGAACCAGGAAAA             CGCCGCC GTCA GGCGGCG              TTTGCGTTTGCGCAA  83 441
CX034_RS01330 NONE
CX034_RS01335 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC  274050 ..  274087 +  -2.7  -2.71041   AGGCCGGCTGCACCG   CGCCGCGCCCATGT GACTGGCCTAA GCATCGGCGC-GCG   GTTATAGTTCGCCTT  40 10
CX034_RS01360  274808 ..  274834 +  -8.7  -2.84812   CCCAATCGGGCAGCA        CGCG-CACCAGG CCTG CCTGATGGCGCG         TGTCATGCTGTCGCT  54 157
CX034_RS01370  276239 ..  276280 +  -7.9  -4.18488   CGGCCGGACACTGTG GGCAGTGCTTCGCGCGCAGC ATG GCTGCGCCAGGCGCA-TGTC TTTCTTGCCATCCGT  74 167
CX034_RS01390 NONE
CX034_RS01395  279171 ..  279183 +  -3.3  -3.34517   TGCATTGTAGTGAAA                CTTCG CGC CGCAG                TCTTTCGGACAGGCT  46 518
        mscL  284440 ..  284452 +  -6.2  -3.63569   CAGGCCCAGCACGCG                CGCC AGCTG GGCG                TTGTTGCCCCATTGC  57 479
CX034_RS01440  286143 ..  286177 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS01470  292514 ..  292540 + -12.3  -2.58544   CAGCACCGCCAGCTC        GGCCGCGGCCAC GGCG GTG-CCGCGGTC         ATTGTGCGGGTGCAC  62 285
CX034_RS01480  294157 ..  294200 +  -8.1  -3.33814   CGGCGCGGCGCGAGC CGCCGG-CCTGAGGCGCCGGCG GGG CGTCG-TGCC-CGGATCCGGCG TATTATCTAGCGTTT  56 15
CX034_RS01485  296255 ..  296281 + -11.5  -2.74488   TGTCCTGATTCACAG        GCCCGCG-CGGC CAGC GCCGGCGCGCGC         TGATTCGCGTCGTTG  62 176
CX034_RS01495  298796 ..  298815 +  -7.8  -3.35679   TGATGCCCAGCTCCA            GCCCGATC AGGT GATAGGGC             TTGTACATGGCCGAA  59 391
CX034_RS01520  303340 ..  303371 + -10.1  -3.05384   TCCACCTTGAGCAGC      GGCAGCCGGCCCAC GTCCA GCGGGTC-GCTGCC      TTCGGTGCGCAGCAG  59 344
CX034_RS01540 NONE
CX034_RS01545 NONE
CX034_RS01550 NONE
CX034_RS01555 NONE
CX034_RS01560  310348 ..  310375 +  -9.1  -4.07568   TCCCGAAGTCTTCCT        TC-CTGCGCCGG CCTGT CCGGCGCAGCGC        TTTTGGGGACGGCAC  75 56
CX034_RS01575 NONE
CX034_RS01580 NONE
CX034_RS01585 NONE
CX034_RS01590 NONE
CX034_RS01595  318579 ..  318597 +  -3.1   -3.4247   ATCTTGGCGTGCGTC            TG-GCGGG CGCG CTCGCTCA             TGTTGTTGACGTTCT  47 336
CX034_RS01620 NONE
CX034_RS01625 NONE
        ruvX NONE
CX034_RS01635 NONE
CX034_RS01640  326571 ..  326585 +  -2.7  -2.82516   CAGCCGCAGCGTGCA               CACGC CGTTC GCGGG               TATGATGCTGCCCGG  41 64
CX034_RS01645  327391 ..  327427 + -16.4  -3.06831   TCGCCGGCGAGCTGT    AGCCGGCCCGGGCGGC GCGTG GCCGCCCGCGGCGGCG    TTCAGTCGCCGTTGG  79 24
CX034_RS01665  331718 ..  331742 +   -15  -3.16492   TCATCCTCCGGTTGC         CGCCGCGCGGG CCGT CCCGC-CGGCG          TGTTGCTGGCTATCC  76 408
CX034_RS01710 NONE
CX034_RS01715 NONE
CX034_RS01720  340860 ..  340882 +    -9  -2.71681   CGCGCAGCAGCCGGT           CGCCGGCGGC ATG GCCGTGGGTG           TCATTGACCGACTTG  52 361
CX034_RS01745  344573 ..  344583 +  -2.4  -2.82519   CCAGCGTGTCGCACC                 AGCG CGC CGCC                 TGATTGATGTCATGC  39 190
CX034_RS01790 NONE
CX034_RS01795 NONE
CX034_RS01800 NONE
CX034_RS01805  355088 ..  355122 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS01825  359296 ..  359320 +  -7.8  -4.96388   CTGAAGCGGCGTCGC          GCCCGGGG TGCGGGTTT TCCCGGGC          TTTTATTTAGTGCTT  86 37
CX034_RS01830 NONE
CX034_RS01835 NONE
CX034_RS01840  362150 ..  362166 +  -3.6  -2.62157   CAAGAAGTAGACGCA              CCCTGG AACGG CCATGG              CTTATCGCATTCATC  40 31
CX034_RS01845  363217 ..  363244 + -15.6  -2.56596   TGCCCGGGGTGCCGG        GGTGCCTGTCCC AGCG GGGACAGGCACA         TGGATTCCTGCGGGG  74 69
CX034_RS01850  364197 ..  364225 + -10.1  -4.11216   GCAACAAGCGGCGGG        GTTTGCCGGCGCG GCT CGCGGCGGCGCGC        TTTTCGGCATGCCGC  78 94
CX034_RS01855  365814 ..  365830 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CX034_RS01870  368061 ..  368090 +  -4.1  -4.29738   ACATAGTTGACGTAG       TTGCCGGCGCCGT GGCC GTGGCGCACGCAG        TTTTCGTGGATATCG  67 144
CX034_RS01885  371438 ..  371467 +  -2.7   -4.8622   AGGAGCTCGTCCCCA       CGGGGACTGGCTCC CGA GGGATCAG-CCCAG       TTTTTCCTTCAGCAG  77 118
CX034_RS01905  376093 ..  376121 +  -4.5  -3.35679   GGCGCGGCCCGCGAA       GCAGCTGCGGGC AGGCAG GCCCG-GGCTGA        TTATCCATGCAACGA  51 79
        mreC NONE
        mreD  377551 ..  377576 +  -3.9  -3.09492   GACGACGTCGAATCT         TCCG-CCGTCTG ATC CGGGCGGGCGCA         TGTTCGAATTCAAGA  45 14
        mrdA NONE
        rodA  381132 ..  381179 +  -4.6  -3.61715   CCCTGCGCATCGATC AGCGCGC-CGTCGGGGGCCGG CTCGCCC CTGGCCGCCAGCACGCGCGCC TTGTTGACCGCGATC  54 496
CX034_RS01955  387255 ..  387293 + -11.9  -4.42788   TGGTGGCCCAGAACT  TCACCA-GCACGACCTTGC CGC GCA-GGTCCTGCATGGTGA  TTTTCTGGCCTTCGA  88 498
        rsmI NONE
CX034_RS01985  391027 ..  391061 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS01995 NONE
CX034_RS02000 NONE
CX034_RS02005  394319 ..  394350 + -15.9  -4.25104   GGCTGAGCGCCGGCC      CGGGTGCCTGTCC CCGCGC GGACAGGCACCGG       TTTTCCTGCGGGGAC  95 35
        trxB  401094 ..  401104 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS02040  402385 ..  402406 +  -8.7  -3.18582   GCGCCACCAGGCCCA           CCGCCTGCGT ATC GCGCAG-CGG           TTGGTAGCTGAGCTG  56 269
CX034_RS02100 NONE
CX034_RS02105  415009 ..  415023 +  -2.7  -2.62184   TGACGCCAGGGAACT               GGCGG GCACG CCGCA               TGGTCTGAGCAGAAG  39 38
CX034_RS02110  416422 ..  416432 +  -5.4  -3.37533   AGAAGAACGCGTGCA                 GGAA GCG TTCC                 TTGATGGTTTTGGGG  49 438
CX034_RS02125  417826 ..  417881 +  -9.8  -3.13403   CCAGCACCAGCCAGA GGC-T--GCGCCGC-GCGTCGGCAAAGCG CGC CGCCTGGCCG-CGCAGCGGCGCGTACGCC TCTTCGTCGGCCGCC  60 53
CX034_RS02140  421085 ..  421095 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 54
CX034_RS02145  422224 ..  422261 + -10.6  -3.53224   GCCGGTCATGGAGCA  GCC--GGCCAGGCGC-ACG CGC CGTTGCGCCCGGCCACGGC  TTTCGCGCAGCGCTA  70 123
        gltS  423521 ..  423532 +  -4.4  -3.16881   GCCGTTCGTGGGAGG                CATG TGAC CATG                 TTCATCCGCTGGCTC  47 19
CX034_RS02155  425465 ..  425479 +  -2.1  -3.14931   GATCACGATGCCCGC              GCC-TC CCTT GATGGC               TTCGTCCAGGCTGGC  43 455
CX034_RS02185  431435 ..  431447 +  -6.9  -3.29144   GAACACCAGGGCCTT                GGGCG CGA TGCCC                TTGTGCAGCAGGTCG  52 187
CX034_RS02210  435009 ..  435022 +  -4.5  -3.53733   AGGCCTGAACAGCGC               CCGGT GATC ACTGG                TGTTTATCACCTCCG  52 33
CX034_RS02215  437224 ..  437239 +  -6.8  -3.03124   CGGTACGCCGAACTG              CTTGCG CGTG CGCAGG               TATTCCGCCGTCAGC  48 408
CX034_RS02255  445647 ..  445705 +  -7.5  -2.70932   GCTGCATGAAGGCCT CCAGCACGCGACGCGGCCTGGGCACGGGG ATCCA CGCCATGCCCAGGC-GCAT-G-G-GCTGG TGCTTGCCGGCCAGG  49 189
CX034_RS02275  450888 ..  450898 +  -2.4  -3.17075   GCGGGACGGCCATGC                 ACGG CGC CCGA                 TTGCGTTGCCCACCA  42 42
CX034_RS02280  451933 ..  451946 +  -3.7  -2.56596   AACCATCGCCAACGT               CGCCG ACAT CAGCG                TCGATTGATCGACAC  40 4
CX034_RS02285  453168 ..  453180 +  -4.7  -4.20696   GGGACAGCCTCCCTG                ACCGG CCG CCGGC                TTTTCCCCTTACTCC  66 202
CX034_RS02295  455901 ..  455915 +  -2.1  -3.17075   CAATAAAGCACCTGG              C-AGGC AAAG GCCTCG               TTGAGTTCCCACAGA  43 267
CX034_RS02310 NONE
CX034_RS02315 NONE
CX034_RS02320 NONE
CX034_RS02325 NONE
CX034_RS02330 NONE
CX034_RS02335  468438 ..  468448 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS02340  469528 ..  469559 + -12.2  -3.03338   TCAGTTCGAAGGTGC      GCAGGCGGGCCAGG CGCG CCTGCTCCTCCTGC       TGTTCGCGGACTTCT  67 101
CX034_RS02350  471477 ..  471503 + -11.5  -3.58231   GACCCCGCCTTCGCG         GCGGGCGTTCG TGCGC CGGGCGTCCGC         TTGTGTCCATTCTTT  72 53
CX034_RS02355  472624 ..  472634 +  -2.4  -3.14344   CGATCTGTGATGCGC                 GGGC GAT GACC                 TTGCTCAAGGACCTG  42 31
        prmC NONE
        grxD NONE
CX034_RS02370  474397 ..  474423 + -22.4  -3.64703   CGCCTGCCTGTACCT         GAAGCCTGCCCC GAT GGGGCAGGCTTC         TTTGCGTACGGCCGC 100 53
CX034_RS02375 NONE
CX034_RS02380 NONE
CX034_RS02385 NONE
CX034_RS02390  480371 ..  480386 +  -3.2  -3.17685   GGGGAGTTTGTCGAT              GGAGTT CACT AACACC               TTCCATGTGTCCTTG  44 14
CX034_RS02395  480893 ..  480941 +  -7.9  -3.14132   CGCGGCGCCTGTAGC CGCGGCC-GCGCCCGCGGGCAG CGTGGT CAGCCCGGATGCGCAGGCTGTG TTGCTGCAGGCGCAG  54 130
CX034_RS02400  481181 ..  481205 +  -7.8  -2.91582   TTCCGATACGCGAGG         CGCCTG-TCCC GCAT GGGAACTGGCG          TCTGTCCGTGCAGTG  52 61
CX034_RS02425  486345 ..  486388 +  -9.5  -3.44222   CGGTAGGGCGGGGTT CGGTGTGGGTGCCAGTCCCC GCAAG GGGGACAGGCA-CCGTGGCG TTACTTGCTGCTTTG  63 35
CX034_RS02470  493806 ..  493836 +  -8.2  -3.53012   CTTATCCCTGATCCC      GGCGCTGGCC-GC CATGGC GCTGGCAGGCGCC       TTTCCCGCGCCGAGC  62 194
CX034_RS02480  496886 ..  496902 + -10.8  -2.73875   GAAGGTCCTGACCGG              CGCGCG GGTGG CGCGCG              TGGTGTTCCAGAACC  60 372
CX034_RS02490  499275 ..  499292 +  -8.3  -3.90112   GACAGGGCAGGGCCG             CGCCGCC GCCA GGCGGCC              TTTCCTTGAAAAACC  70 41
CX034_RS02495 NONE
CX034_RS02500 NONE
        aspS  502286 ..  502318 +  -9.8  -3.64703   GCCAGCGGCCGGAAT     CGGGC-AGGCCGGGC AATG GCGTGGCTTCGCCCG      TTTCGATAACGCGCC  70 81
CX034_RS02510 NONE
        clsB  504491 ..  504503 +  -6.2  -3.14132   CGCCGGCCAGGATGC                GCGG CGTCA CCGC                TTCGTCCAGGAACCA  50 111
CX034_RS02540  509455 ..  509498 +  -8.1  -3.18199   CGAACCGCTGCAGTA AAC-C-G-CGGCGTCCGCCGGC CTC GCCGGCGGACGCTGTCCGCGCC TTGCCTTGCGCCTTA  54 25
CX034_RS02545  510863 ..  510887 + -10.7  -2.71011   ACGCCGCCTGAAGCG         CGGCGGCCGC CAGCCC GCG-CCGCCG          TGCTTCAGCCGGCGT  60 30
CX034_RS02555  512915 ..  512945 + -10.3  -3.43446   GGGGCTGGGGCAGCA       GGCCATGCGCGCG CGCAA CCCGCGCCTGGTC       TATTGTTCGGTATCG  65 374
CX034_RS02565  514654 ..  514672 +  -8.1  -3.47227   CGCGTCGGACAGGCC            GGCGC-CG ATGC CGCGCGCC             TTGTCGTCCTTGCCG  58 209
CX034_RS02625 NONE
CX034_RS02630  527361 ..  527388 +  -7.6  -3.22884   GCCCCCTTACCGGAA        GTC-CGGCGCGCG CTT CTCGCGCAGCGAC        TTGATGCCTTCGTGC  56 114
CX034_RS02640 NONE
CX034_RS02645  529612 ..  529643 + -13.1  -4.20516   CTCGCGGCGCCGCCG      CGTTGCGTCTGGCC TGTCT GGC-AGACGCGACG      TTTCTTCCGTCCCCC  91 149
CX034_RS02655  532496 ..  532527 + -17.2  -3.53012   TGGCCCAACCTATCT      GACCGGCCGGGCCG GCGA CGGCCGGACCGGTC       TTTCGAAGACCACCA  89 24
CX034_RS02660 NONE
CX034_RS02665 NONE
CX034_RS02670 NONE
CX034_RS02675 NONE
CX034_RS02680  538274 ..  538301 + -21.4  -3.62597   TGCACCAAGGGCGTG        GGTGCCTGTCCC CGTG GGGACAGGCACC         TTGTTCCCCCCTCCG 100 56
CX034_RS02760  555420 ..  555444 +    -7  -3.01791   GAACAGGTTGAAGTA          GCTGGCCGCG TCCAT CGCCGCCACC          TGTTCGGCCGGCGAT  51 234
CX034_RS02775 NONE
        folB NONE
        ttcA  561535 ..  561545 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS02795  562675 ..  562694 +  -3.4  -3.30124   CGTTCACATAACCCA            GGTGCGGC GTAA GCAGCACG             TTGTCCAGCGTGCGC  47 151
CX034_RS02825 NONE
CX034_RS02830  569007 ..  569032 +  -6.7   -4.7497   GAAGTGCAGCGCCAA         GCCCGGAACCCG TAA CTGGA-CCGGGC         TTTTTGCTGCATGCC  84 212
CX034_RS02835 NONE
CX034_RS02840 NONE
        trpD NONE
        trpC  573088 ..  573120 + -12.6   -3.8186   CCGGCCTCAGCGGCC     GCTGCCG-CGCGCCG GCGC CGGCGCGCCGCCCGC      TTCTTCCTTGCGATG  81 55
CX034_RS02865  576951 ..  576983 +    -9  -3.04322   GGGCGGTCTGGAACA      TGACGCTGCGCGCC TGCTC GGCGCGCATGGCCA      TCTTGGCCAGTTGCC  57 46
CX034_RS02875  579143 ..  579184 + -10.1  -2.78463   ACAGCACCAGCGATT CGATGTC-GCTGCCCACCTG GGT CAGGTCGGCGGCCGTCATGG TGTGGTCCACGCGCT  56 113
CX034_RS02910  585398 ..  585433 +   -19  -3.14132   GCGTGCTGGCGTATG    ACGGGGTGCCTGTCCC CGCT GGGACAGGCACCCGGA     TTCCTGCGGGAAGAG  90 76
CX034_RS02925 NONE
CX034_RS02930  589843 ..  589861 + -17.4   -5.1971   CACCTGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 202
CX034_RS02955  599107 ..  599126 + -12.8  -5.60993   TTACAGGTAAAAAAA            CCGCTGGC CCTT GCCGGCGG             TTTTTTTATGCGCGG 100 51
CX034_RS02965 NONE
CX034_RS02970  602931 ..  602987 + -16.4  -2.80398   AGGGACGTTGCGCGC CGGCGTCCCG-TCCCGGGTGCGGCGCC TGGC GGCGCCGCACCCCGTATCGAGTTGCCA TGCTTGCATTCATTC  77 49
CX034_RS02975  604341 ..  604390 +  -6.4  -3.73775   GCCGCGCCCGCCCAG CAGGCGCGCGCCGGCGCCGC CCATCTGGACAT GCGGCG-CGGCGT-CGTCGG TTTCGTCGGCGTCGG  59 171
CX034_RS02985  605728 ..  605783 +  -2.5  -4.45175   ATACGTCTACACGAT GAACCGTGTCG-GCAAGATCGTGCCGC CCAA GCGGCA-GATCCTGCGCGACATCTCCC TTTCCTTTTTTCCTG  67 143
CX034_RS03000  608233 ..  608248 + -11.8   -4.7497   CGCCTCAACGAGAAA              CCCGGC TTCG GCCGGG               TTTTTCGTGGCTGCC 100 66
CX034_RS03005  609582 ..  609620 + -20.3  -3.25113   CGGGGACCAAGATTC   AGCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGAG   TATTCAGTTTTGCGG 100 68
CX034_RS03030  615381 ..  615408 +  -9.2  -2.61582   GTATCCGCGCCCGCA        CCG-AGATCAAGC CGC GCTGGATCTTCGG        GTTCTGGGTGGGGTC  54 390
CX034_RS03055  620677 ..  620688 +  -7.2  -3.95456   GCTAGCCAGTTCCCG                GGGC CGCG GCCC                 TTTCCTGTTCCGTTT  66 36
CX034_RS03060  622010 ..  622052 + -14.1  -2.78384   CGGTTTCGAGCAACT GGCGCTCGTCGGGGCCGATG TGGC CGTCGGCCTTGGCC-GCGCC TATCATGGCCACCAG  67 302
CX034_RS03070  623137 ..  623155 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 214
CX034_RS03095  628198 ..  628211 +  -2.3  -3.02166   GCCGACGATCCGGGC               CGGTG ATAA TGCCG                TACTTTCATTCCGGC  41 20
CX034_RS03100  628879 ..  628913 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS03135 NONE
CX034_RS03140  638039 ..  638051 +  -9.1  -3.02511   TGCCACAGCACCACG                TCGCC GTT GGCGA                TATTGAACGCCTCGC  55 368
CX034_RS03175 NONE
CX034_RS03180 NONE
CX034_RS03185 NONE
CX034_RS03190  646630 ..  646683 +  -4.3  -2.94144   GCGCGGGGGGTGCAC TGATGATCCGCCTGCCGCTGCGCCGC GCC GCGCTCCTGCCGCTGGCCG-TCATCG TCCTTTACCTGCCGG  44 23
CX034_RS03195 NONE
CX034_RS03200 NONE
CX034_RS03205 NONE
CX034_RS03210 NONE
CX034_RS03215  651962 ..  651998 +  -7.9  -3.85698   CATCGATGACTTGCG   CGTGCTGCGCGCCGAC GCGCTG GCCGGC-CGCAGCGCC    TTTGTCAGCGGCGCC  66 110
CX034_RS03225  653771 ..  653785 +  -3.4  -3.78934   GATACCCGCAACGAT               CCCCGG CTT TCGCGG               TTGTTCTCCAACCGC  56 202
CX034_RS03235 NONE
CX034_RS03240 NONE
CX034_RS03265 NONE
CX034_RS03270  664357 ..  664384 + -11.4  -4.50976   GTAGCGCCCCGGAAA        GCCCGCATAAACT TCA GGTTT-TGCGGGC        TTTTCTCATCTGGAC 100 63
CX034_RS03275  664909 ..  664928 +    -7  -3.08679   CCGTAGCTGAAGAAC            GCGTCAGC GAAG GCGGGCGC             TATTGCATCGAGCCG  52 35
CX034_RS03290  665985 ..  665995 +  -3.2  -3.41602   GGGTGATGGAATGAA                 TGCC CTG GGTA                 TTGTGATACCATGCA  48 27
CX034_RS03295 NONE
CX034_RS03300  667409 ..  667442 +  -4.6  -4.36411   CCAAGCTGATTACCG    TCCACAACCCGGTTGT CTGA GCA-CCGGGTCG-GGA     TTTTCGTCATTCATG  69 6
CX034_RS03305 NONE
CX034_RS03310 NONE
        ureC  670102 ..  670114 +  -5.5  -3.98159   TTGCCGAGCTGCCCA                TGGCG CAA CGCTA                TTTCCTGTTCTGATC  63 0
        ureE  670784 ..  670811 +  -6.8   -3.1372   GTTGCATCTGTCTTC        GCCGGCGCTGCC GATC GGCGGCTTCAGC         TATTCGTAGGGCCTG  52 62
CX034_RS03325 NONE
        ureG  672175 ..  672215 +  -8.7  -3.58726   GCTTGCCGAAGATTC  CCGCGCACGCGCTTGCTCG GTG CGGGCCGGCGCGCCTGCCG  TTATATATAGAGGAC  62 99
CX034_RS03375  685200 ..  685217 +  -9.1  -3.16564   CAGGGCAGGGCGTTG             TCGCGTC CGAT GACGCGG              TTGGTCGAATAGGCG  56 422
CX034_RS03395  687988 ..  688011 + -16.8  -6.06723   CCTTTGGTGGATTTA          GCCCGAGATC GCAA GATCTCGGGC           TTTTTTTTTCGCCGC 100 465
CX034_RS03400  689457 ..  689467 +  -6.8   -3.1506   CATACAATTCCGTAG                 CCGT CAC ACGG                 TTGATAGGGAGATTT  52 102
        tviB NONE
        tviC  691781 ..  691793 +  -4.8  -3.51232   CCATGCCCTGGTACA                CGCA ATTCC TGCG                TTGATTTGAAAGCCA  52 9
CX034_RS03415 NONE
CX034_RS03420 NONE
        asnB NONE
CX034_RS03430 NONE
CX034_RS03435 NONE
CX034_RS03440  699974 ..  700001 +    -9  -2.60571   GCCAGGATCTCGGCC        TGCTGCGGGTCG GACT CGACCAGCCGCG         CTTCCTTGAGCGCTT  51 325
CX034_RS03455 NONE
CX034_RS03460 NONE
CX034_RS03465  705748 ..  705773 +  -3.1  -3.54543   GGCTGGCGCTGCCGG         CGGGTGGCGCA TGAG TGCACGGCCTG          TTTCCGGCAATGGAT  49 12
CX034_RS03470  707142 ..  707168 +  -5.9  -5.40072   ATTTGACATCGATTT        GACGCCCAA-CA GGTA TGCTTGCGCGTC         TTTTTTTGCAACGAG  95 87
CX034_RS03475  709381 ..  709400 +  -7.1  -3.16564   CGCCCCAGGGCAGGT            CGAGCGGC TGCTT GCCGC-CG            TTGGTCAGCTCCAGC  53 285
CX034_RS03490  713164 ..  713190 + -10.8  -3.18582   GGCCAGCAGCAGGAT         CAGCGCCGCG TTCAGCT CGCGGCTCTG         TTCGTCGCTGAGGTC  64 131
CX034_RS03515 NONE
        lolB  719443 ..  719459 +  -6.5  -2.52896   CGGCGGTCTAGAATA              GGGGC ATCCCCA GCCCC              TCGCTTCCGCCGTGA  45 46
CX034_RS03525 NONE
CX034_RS03530  720466 ..  720508 +  -4.2  -5.79595   CCAATACATAAAAAA GCTGTTGAAC-G-CGCCCGT CAGAC ACTGGCTCCAGTTCAGCAGC TTTTTTGTTTTACGA 100 43
CX034_RS03535  721585 ..  721609 + -12.8  -4.07885   GCGGCGCGCAAAAAC          CACGCAGCGC ATGTC GCGCCGCGTG          TTTTAACCGGCGATC  83 81
CX034_RS03540  722320 ..  722358 + -24.8  -2.91695   CGTGCCCGACGTCCC   CGAAACCCTGCGCATGCG ATT TGCATGCGCAGGGTTTTG   TACTTTACAAATACG 100 79
CX034_RS03545 NONE
CX034_RS03550 NONE
        ychF  724987 ..  725005 +  -6.7  -3.05816   TGGTGGACAGATTGG             CCCGTTG TAAAT CAATGGG             TTGCATAAACAATAC  51 78
CX034_RS03560  726383 ..  726410 + -16.4   -3.4285   GCGAAGTGGGTAGAA        CGGCCTTATCCT TTTC AGGATAGGGCCG         TTGTCCCTTGAGTGC  85 67
CX034_RS03565 NONE
CX034_RS03570 NONE
CX034_RS03575 NONE
CX034_RS03580 NONE
CX034_RS03585  735158 ..  735171 +  -3.1  -2.79183   TGGTGACCTTTTCGG               CGAGAC GGA GTC-CG               TATGATACAGATAGC  40 7
CX034_RS03590 NONE
CX034_RS03595 NONE
CX034_RS03600 NONE
CX034_RS03605  737436 ..  737455 +  -6.4  -2.64243   ATTCCAGCACCCAGA            CGCGCAAT GCCG ATTCCGCG             TCATGTCCGATATGG  46 379
CX034_RS03615 NONE
CX034_RS03620  739314 ..  739328 +  -3.5  -3.72893   CGCGTTGCTCTGTCG               TGGTG ATGGG CACCG               TTTGCTCCCGACCTC  54 436
CX034_RS03650  747446 ..  747473 + -10.5  -3.08679   GCCAAGCGCGGCGCC        GGCG-GCGCGCC GGCCG GGAGCGCTCGCC        TATTGCCTGGCCCCG  62 49
CX034_RS03660  750026 ..  750053 + -13.4  -3.34398   GCGCAGTTCTTCATA        TCGGCTGCTGCC GCGC GGCAGCAGCAGG         TCTTTCCAGGCGGCA  74 237
CX034_RS03690  755221 ..  755239 +  -4.6  -2.78596   CAGAAAATATATATA             CCTACA GAAAACA TGTAGG             TATAATCCGAACATC  43 85
CX034_RS03695 NONE
CX034_RS03700 NONE
CX034_RS03705  758936 ..  758954 +    -3  -3.01001   CCCCTCGCATACAAC             GACAAGGA GAC TCCATGAC             TGTCATTTCCCGCTA  42 163
CX034_RS03710  759970 ..  760010 +  -4.7   -3.2794   AACTAGGCTTGCGGG TGGCTACCGGG-TGCGGGCC GCAA GCCCCGCAGCCCGGC--CCA TTGGTGTCCATGGAC  49 35
        modA  761143 ..  761187 +  -9.2  -2.64616   CCCTGCTCAAGGCCT GGTCGCCGGCGCTGATCC TGCTGAAAT GGATCGGCGGCGCCTACC TCGTCTACCTGGGCA  54 302
CX034_RS03725 NONE
CX034_RS03730 NONE
CX034_RS03735  763257 ..  763285 + -11.6  -3.30771   TCGACATCGGCTCGG        CCGGCCGCGTGG AAGTG CTGCGCGGCCCG        TTCTCGGCCCTGTAC  68 419
CX034_RS03745  765583 ..  765594 +  -7.2  -5.30616   CAGTCCATGAACCAC                CGCC TTCC GGCG                 TTTTTATTTCCCTCG  95 113
CX034_RS03750 NONE
CX034_RS03755  766140 ..  766166 + -13.7  -3.09831   GTCGGTCTCGCCCCA        TGACGGCCGCCC CCCG GGGCGGCCG-CG         TCCTTTTGCGGTACG  73 51
CX034_RS03765  767765 ..  767781 +  -5.7  -4.36914   AGGTCCGCTAAGCGG              GCGGGGC GCG GGCCTGC              TTTTGTGGGCGCGAC  72 30
        modA  768661 ..  768671 +  -2.4  -2.61264   CTGTAACCCCTTGCA                 GGAG TCC CGCC                 CTTGTCGCTGACCAG  38 35
        modB NONE
        modC  770843 ..  770866 +  -5.2  -3.72576   CCCTGCCCTGCGGCT          TG-GGCCCGGC GTA GCTGCGCCGCA          TTTCGTAAAGCCGCA  58 394
CX034_RS03795  774345 ..  774366 +  -6.5  -2.87132   TTTCCCTTGTTCGGC           CTGGCGCAT GCAT ATGCGCCGC            TATATGCGGCAAGGA  48 257
CX034_RS03800  776085 ..  776135 +  -5.1  -2.50034   CGGCTAAGGCCTGAC CCAACCGGACCAT-GCGGCGCGGG CCTG CCCGCGCCGCTGCGCTCCACCGGG CGTTTTCCCTTCATG  44 34
CX034_RS03805  777398 ..  777415 +  -9.1  -3.14132   AGCGCCTGCAAGCGC             GCCTGGCG CAG CGCC-GGC             TTGATGCGCGCCGGA  56 68
CX034_RS03820  781289 ..  781313 +  -8.4   -4.1899   GCGCTGAACACGCCA          ACCCGGGCGG CCCGT CCTCCCGGGG          TTTTCCCTAGGGTCG  76 34
CX034_RS03825 NONE
CX034_RS03830  783977 ..  783992 + -11.8  -5.18357   TGTCCATCCGGAAAA              GGCGGC CGCG GCCGCC               TTTTTTCATGCCTTC 100 50
CX034_RS03835  785221 ..  785255 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 259
CX034_RS03875 NONE
CX034_RS03880  793728 ..  793746 +  -2.2  -3.57263   ACTGAAACGGCGGCC             ATCCCGGG CGT CCAGGGGC             TTTCCGCGTCGGAAT  48 36
CX034_RS03885 NONE
CX034_RS03890 NONE
        xerC  796796 ..  796831 +  -8.9  -2.80816   AGCGGTGCCGGACTT    CGC-CCTCGACGCCGG TGAAC TCGGCGTCGCGCTGCG    TGTACTCGATCAGGC  52 436
CX034_RS03930  803606 ..  803632 +  -3.8  -3.93556   GCTCCGTCCCCTCTT         GAAGATGG AAATTCCGCCC CCATCTTC         TTTCGTTGCATCGAT  59 76
CX034_RS03935  805050 ..  805066 + -10.1  -2.57795   AGCCAGGCGCGAATA              TTCGGGC CGC GCCCGGA              TCGATTCATAGTGGA  57 128
        dksA  805605 ..  805628 + -13.2  -5.07652   CCGAACGCATTACCA          GGGCTATGCT CCAC GGCATAGCCC           TTTTGTTTTCGGACC 100 76
        hslV NONE
        hslU  807579 ..  807604 + -11.9  -3.81027   CGGCAGCCAGGACCT         GGCC-CGCTACG TGC TGTAGCGCGGCC         TTTCCCTTACTTGGA  79 7
CX034_RS03965  808940 ..  808950 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CX034_RS03970  809933 ..  809972 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CX034_RS03975  811342 ..  811359 + -11.3  -2.56596   TTGGCCCTGGCCAGG             CAGCGCA TCGA TGCGCTG              TCGCTTGATGCGCGC  59 364
CX034_RS04010 NONE
        zapA  818524 ..  818538 +  -2.8  -2.95102   CTCGCGCGCAGTATT               CATGCA GTA TTCATG               GTTTGTCCCTGCCGT  42 55
        ssrS  818728 ..  818762 + -12.3  -3.05993   CAGGCGGGGCATCTA    TCC--AGGCAGGCCTGT ATC GCAGGCCTGCCTTCGGA    TGTCTCTCTCCCTCC  67 27
        ilvD NONE
CX034_RS04045 NONE
        msrA  824526 ..  824557 + -10.8  -3.69256   GGATGCCTTCGCCGC      GGTACAGGTCCAGG TATT CCTGGATCTGCCCC       TTCTCTTCGGTGCCT  74 458
CX034_RS04060  826166 ..  826180 +  -4.9  -3.56643   GCGACGAAGCCGGAA               CCGCG AATCA TGCGG               TTTGCAGGATCTCCG  52 289
CX034_RS04065 NONE
CX034_RS04070 NONE
CX034_RS04075  828625 ..  828663 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CX034_RS04080  831888 ..  831898 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf  832073 ..  832107 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CX034_RS04090  833050 ..  833070 +   -14  -4.54727   CGGTTCCGCTCGCAA            CGGCTGGC TTCGT GCCAGCCG            TTTTCGTTTGCAGGC 100 56
CX034_RS04100 NONE
CX034_RS04105  836305 ..  836359 +  -9.9  -3.56862   TCGCGCAGATCCCAG GCGCTCAGCCGTGCCGCG-CGCACC GGCTTGG GGCGCGCCGCGGCG-GGCTTGGCGG TTTCGGCGGGTTTCT  67 285
        rnpB  838433 ..  838453 + -19.7  -2.52464   TGCATTTTCATGACA            GCCGGCCGG AAT CCGGCCGGC            TGGCTTACGGCGCCC  93 41
        mraZ NONE
        rsmH NONE
        ftsL  840494 ..  840515 +  -6.5  -4.16016   AACCAGCCCGCCGGA           GGCGCCCAGT GAG GC-GGGTGCC           TTTCTTCGACAATCC  66 14
CX034_RS04135 NONE
        murF NONE
CX034_RS04145 NONE
CX034_RS04150 NONE
        ftsW NONE
        murG NONE
CX034_RS04165 NONE
CX034_RS04170  852363 ..  852375 +  -3.3  -2.87132   CGGCGCGACAAGATT                GAACG GGA CGCTC                TGTGTGGAACGACGC  41 24
CX034_RS04175 NONE
        ftsA  854531 ..  854542 +  -3.6  -3.55622   CCGTTGCGGACCACG                GTCG GCTT CGGC                 TTTGAGGCGATTCAC  51 127
        ftsZ  855987 ..  855998 +    -3  -3.63968   CCGGTTATGCCGGTG                TCTA TTGG TAGA                 TTTCCGGCTTTCGCA  53 210
CX034_RS04190  856981 ..  857009 + -14.6  -4.57073   CGATATCGGTTTTCG        TCCTATGGCCGC GCTGA GCGGCCATAGGC        TTTTTGGCGGGGATG 100 52
CX034_RS04200  858640 ..  858665 +  -5.4   -3.5394   CACGGCAGGCCGTTG         CGGTCCAGGT GCGTTA AACTGGATCG          TTTCCCGGCGGGTTT  54 77
        secA NONE
CX034_RS04210  862375 ..  862388 +  -5.9  -4.19704   TGCGTGATCCATGGA               TGGCC GGCA GGCCG                TTTTCACTGACCTTA  70 161
CX034_RS04215  863751 ..  863782 +  -8.6  -2.82635   GGCAATGGTGAAGCT      GCCGTGCGGGTCGGC GTA GGCGACGTGC-CGGC      TGTAGTGATCGGGAT  53 368
CX034_RS04225  864884 ..  864906 +  -4.8  -2.57132   GCGCACGCGCGGCGC           GGGCGC TGCGGCATAAT GCGCCC           CTTATCGAAAAGGGC  42 10
CX034_RS04230 NONE
CX034_RS04235  866742 ..  866773 +  -4.3  -2.62396   GGCGTGCGCCGTGAA      CGGGTTTTGCCTG GCGGGG CATGCCAGGCCCG       TCATCTCGCAAGGTA  42 79
CX034_RS04240  867666 ..  867684 +  -6.7  -4.37092   ATGCCCAGGCGGGTA            TCGG-CGC CGAT GCGGCCGA             TTTTCTGGAAACCAT  72 212
CX034_RS04280  875422 ..  875435 +  -5.9  -3.20991   CTGGATCGCAGCGTG               GCCGG CCTG TCGGC                TTGAATTCGGTTGGA  51 8
        aroQ NONE
CX034_RS04290 NONE
        accC  878244 ..  878294 +  -8.8  -2.55668   GTGCCCAGCTGGCAC CGCGACGACCCCGCCGTGCCGGGC CTGGT GCCCGACGCCGCGCG--CGACGCG ATTCATATCGAACTC  52 422
CX034_RS04305 NONE
CX034_RS04310 NONE
CX034_RS04315  881562 ..  881580 + -13.1  -5.40072   CTGCTTCCGGCAAGA             CGCCCGC TTCAT GCGGGCG             TTTTTTTGCGGCGGC 100 48
CX034_RS04320  882078 ..  882115 +  -4.8  -2.78384   CCTGCTGTCCCACCT  GGCCGCGATGGCAAGCGC CGTC GCGCT-GTCGCTG-GGCC   TGTACTGGGGCGCCG  43 44
CX034_RS04325 NONE
CX034_RS04330 NONE
CX034_RS04335  884473 ..  884488 +    -6  -2.56838   AGTCCTATCTGATCC              GCCGGG AGTG CGCGGC               ATGTATTTCGATCTA  46 29
CX034_RS04340  885936 ..  885948 + -10.5  -3.53091   CAGCGATTCCGGCGG                CGGCG TAG CGCCG                TTTCAGACGCCGAAT  67 18
CX034_RS04370  895542 ..  895557 +  -3.3  -3.53012   GTAATCCCTATAATG              CGAAA CAAATA TTTCG               TTTGCGGCGAAAACA  49 155
CX034_RS04375  896197 ..  896211 +  -5.6   -4.6951   GTCGGCAGTCCGGCA               CGCGGC GCT GTCGTG               TTTGTTTTGCGTGGT  77 185
CX034_RS04380  896767 ..  896822 +  -3.3  -3.40522   TTGTCGCCAGCGGCG CGCCAT-TCGGGTA-AGGTGGCGGACTT CCC ACGTC-GCCGCCGCTACCCGCCATGTCG TTGTCGTCCGAAAGT  48 44
CX034_RS04385  898262 ..  898284 + -11.2  -3.01712   TCAGGTGCTGGGCCG           CCAGCTCGGC GGG GGCGGGCTGG           TATTCGCCGCAGAAC  62 283
CX034_RS04395  902175 ..  902209 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS04415  905623 ..  905633 +  -2.4  -3.78934   TCTTTCGCGATCCTC                 TGCG ATC CGCC                 TTATTGTGACCAACA  54 126
        dbpA  907007 ..  907021 +  -4.2  -3.28712   CGGCGGTTCCGCATG               CGCTTC CTG GAAGAG               TTCTGAGCGCGGCGG  47 5
CX034_RS04425  908018 ..  908047 +   -12  -3.16564   CAGACCACGCTGCCG       CCGGCGGCGCGC ACCGCG GCGCACAGCCGG        TTGATGGGCTGCACG  68 521
        pmbA  913834 ..  913859 + -19.1  -3.02096   GCCGGCGCCGGCAGG         GTGCCTGTCCC CGTG GGGACAGGCAC          TGTCTCGTTCATGGC  90 51
CX034_RS04465  915267 ..  915301 + -21.5  -3.53012   GCCGCCGTTTCGGTC    CGGCCAGGGGCCGCCC TTCG GGGCGGCCCCTG-CTG     TTTGGGCGCAACGCC 100 45
CX034_RS04470 NONE
CX034_RS04475  916380 ..  916409 + -20.9  -3.28791   AAGCGCTAATGTCCC       GCAAAAAGGCCGC GAAA GCGGCCTTTTTGC        TTATGGCGCCCCGGT 100 32
CX034_RS04480 NONE
CX034_RS04485  918413 ..  918432 +  -4.2  -2.80074   CTGGAATTTTGAGTC            CTGTCGCG GCTG CGCTATAG             TGATCTTATCCGGGC  41 29
        erpA  918896 ..  918921 + -18.3  -4.54727   CCGGTCCGCGATCGA         GGCCCTTCGGC ATGC GCCGGAGGGCC          TTTTCGTTTGGGCGC 100 53
CX034_RS04510  924028 ..  924038 +  -4.6  -3.30124   GCGTGTTAAGTTGGT                 GGGG TAG CCTC                 TTATCGAGGGTCCCA  49 19
CX034_RS04515  924753 ..  924774 +  -2.9  -4.62069   GGGCTTGCTTGAGCC           TGGCTCATG CCGA CTTGAGGCA            TTTTTGCGGTAGACG  71 52
CX034_RS04520  926228 ..  926249 + -15.9  -5.30155   GCCCGCCGCCGGCAA           GACAGGCCC GCAA GGGCCTGTC            TTTTTTCATTGATGG 100 59
        nrdR  927139 ..  927163 +  -8.6  -2.90194   TGCACGATGGCGTCC         TGCACC-CGGT GCAC GCCGGGGTGCA          TGTGGTTGCGGCCGT  54 330
        ribD  929795 ..  929809 +  -9.2   -2.9006   GCGATCGGAACGCGG               TGCGCG TGG CGCGCG               TCTATCCGATGGGTT  56 98
CX034_RS04560 NONE
CX034_RS04565 NONE
CX034_RS04570  934137 ..  934179 +  -2.5  -3.72576   TTCTCGCGCGAGAAC GCGATGAAGC-GCTGGCCGTC CAG GTCGGCCAGCCGCG-CGCAGC TTTGCTGCGCCAGCG  53 380
CX034_RS04580  936078 ..  936112 +  -6.3  -3.65522   ATGCGCCGGCAATGG    CGCCGGCC-AC-CGCCG GAC CGACGAGCAGGCCGGTG    TTGTTGCCCTGCATG  57 138
CX034_RS04590  938161 ..  938206 + -15.3  -3.05498   GCCTGCGCGAAGGCG CGGCGGCGCTGCGCGGCTGACG CCG CATCGGCCGCGCCG-GCCGGTG TATATATATCGCATG  77 6
CX034_RS04600  939873 ..  939908 +   -19  -2.99319   GTCCCGACCCGTGGC    AAGGGGTGCCTGTCCC GGCG GGGACAGGCACCCCCC     TCTCTCTCCGACATT  90 93
CX034_RS04605  941101 ..  941131 +  -7.4  -2.66969   GCCGCCCGGGAAACC       GCTGCCGCGGATCG CTG CGATCCGCGCTCCC       TCCGTTGTCTTGATA  50 175
CX034_RS04610 NONE
CX034_RS04615  942887 ..  942900 +  -4.5  -3.35813   GAAGCCCGGCCCGGA               GC-GCG AAG CGCAGC               TTGATTGAAATCAAG  51 4
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD  947025 ..  947058 + -28.3  -3.86015   CCGGCCTTGGTTCGC     CGACAACCCCCCGGG CTTG CCCGGGGGGTTGTCG      TTTGTGGCGGGGGTG 100 74
CX034_RS04670 NONE
CX034_RS04675 NONE
CX034_RS04680 NONE
CX034_RS04690  958217 ..  958233 +  -5.7  -3.44229   CTGGGTGCAATCCCG              GGGGTGC CGG GCGCGCC              TTGTCGTCGTAAGCT  53 54
CX034_RS04695  958925 ..  958975 +  -2.3  -2.62184   CCAGGCCGGCCATGA CGTGCCAGCCGACGGGCGGACGCGC CAG GC-CGGC-GCCCATCGCCTGGGCCA TCATGTAGGCGCCGG  38 227
CX034_RS04705 NONE
CX034_RS04710 NONE
CX034_RS04715 NONE
CX034_RS04720  961778 ..  961788 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS04725  963262 ..  963277 +  -2.6  -3.61178   AGTTTTCACGGGGCA              TGGTTA TTCC TAACTA               TTTCAAATGACTCGG  50 495
CX034_RS04735  964198 ..  964209 +  -3.6  -3.48395   CCAGCCTGCCTGCCC                TGCG TCAT CGCG                 TTCTATAGACGGAAT  49 6
        tldD  965729 ..  965746 +  -6.9   -5.9873   CCTGGCCTGGAAAAA             TCGCGTG GTGA CGCGCGG              TTTTTTTTGTGCTAG 100 66
        aroG  967300 ..  967320 +  -9.7  -2.52464   ACAAGGCGTAATCCT            TCATCGTGG CTG CCCCGATGA            TGGATTCGCGCCGGC  55 307
CX034_RS04755  981264 ..  981286 + -19.2  -4.72272   CGCGGTGCCCGGCAA           GCCCACGCGA AGG TCGCGTGGGC           TTTTTCATGCCCGCC 100 57
CX034_RS04760 NONE
        glcE NONE
CX034_RS04770  985632 ..  985667 + -15.4  -3.68619   GGCGGCCGGTATCGA    CGCGCGTCGTGCCC GCCACCCA GGGCTTGACGCGCG     TTTCGATGAATTCCA  88 408
CX034_RS04785  989555 ..  989592 + -20.5   -2.6563   GCGCGCGCCGTTAGG   CGGGCCCCGGCGCGGCGC CAT GCGCCGCACC-GGCCCCG   TGCCTTATTCCACGG  95 27
CX034_RS04815 NONE
        mnmA  996902 ..  996934 + -11.1  -3.73775   GGAGGCGCGCCGGTC      TCGCGGTGGCCGCGG CCG CGGCCGCCACAGCGG      TTTCATAAACCTGGG  73 63
CX034_RS04825  997820 ..  997875 + -24.2  -3.05596   CGGTCGGCGGCCAGG GTGGCCGGCAATGAAAAAGGCGGCTC ATGC GAGCCGCCTTTTTCATTGCACGCCGG TTCGGTCAGGCGGTC 100 62
CX034_RS04835 NONE
CX034_RS04840 1000586 .. 1000601 + -10.4  -5.96521   GCAAGGCAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 62
CX034_RS04855 NONE
CX034_RS04860 1004274 .. 1004308 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS04880 NONE
CX034_RS04885 NONE
CX034_RS04890 NONE
CX034_RS04895 NONE
CX034_RS04900 1010457 .. 1010474 +  -2.6  -2.66869   CGCGCCGGCGCGCCG             GCGCCA AGGAGA TGGCGG              TGAGTTCTTCCATAT  38 49
CX034_RS04905 NONE
CX034_RS04910 NONE
CX034_RS04915 NONE
CX034_RS04920 1013808 .. 1013849 + -14.5  -3.53012   CGGCGCGCCGCGTCC GCGCG-GCGCCGCC-GCTT CAGGAC AGGCCGGCGGCGCGCGTGC TTTCGGCCGACAAGC  81 43
CX034_RS04935 NONE
CX034_RS04940 NONE
CX034_RS04945 NONE
CX034_RS04950 NONE
CX034_RS04960 1021134 .. 1021189 +  -7.2  -3.06696   CGCCGGCCTGGTGAT GGTCGAGGCCACCGCGGTCGAGCCGC GCGG GCGCATCAGCCACGGCTGCCTGGGCC TGTATTCCGACGCGA  51 205
CX034_RS04985 1024733 .. 1024747 +  -3.5  -2.72344   GTCCAACTGCTGGAG              GC-CGC CCAT GCGCGC               TAATTCGAACTCGAA  41 8
CX034_RS04990 NONE
CX034_RS04995 1026476 .. 1026492 + -10.8  -3.31144   GCCTGAAGGTATCGA              GCGCCG GCGAG CGGCGC              TTGTAGCCCTCGGGC  66 35
CX034_RS05010 1029491 .. 1029506 +  -2.5  -3.33696   TACAGATCAACTGAG              CC-GGC CGACC GCCTGG              TTCATTACCCAGGAG  44 27
CX034_RS05015 1030904 .. 1030934 + -21.8  -3.23899   CGCGCCGCGCTGAGC       GGCGCCTGGCCGGC CGT GCCGGCCGGGCGGC       TTGCCTTACTTGAGC 100 28
CX034_RS05025 1032974 .. 1033010 + -23.8  -4.26076   CCCGCCGCTCATCCC   GGCGCGGACGGCTTCCC TCGC GGGAGGCCG-CCGCGCC    TTTTCATGGCGGTGC 100 70
CX034_RS05030 1033866 .. 1033899 +  -8.7  -3.18681   GGCGGGCGTAGTGCT     CGGC-GTTGCCGGCCT GCT GGGCCGGCGTCAGCAG     TTCGTCGGGTTCGCG  56 400
CX034_RS05045 1036984 .. 1037026 + -12.6  -3.16564   GGCCAGGCTGATCAG CGCGGCGAACATGGTGCTGG TGT CCAGCGTGGTCGTCGCCGCG TTGATCAGGTAGCCC  68 140
CX034_RS05080 1042798 .. 1042808 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 178
CX034_RS05085 1043843 .. 1043857 +  -3.5  -2.53382   CGGGCGCCATCAGCC               TGCCT ATCGA GGGCA               TGACTTGCGCCTCGT  40 56
CX034_RS05090 NONE
CX034_RS05095 1047051 .. 1047072 + -12.9   -3.8591   CGTGTCGGTATCCGC           GGGCGCGGG CGTG CCCGCGCCG            TTATTCATTGTAGGA  83 52
CX034_RS05100 1048457 .. 1048482 +  -3.1  -3.15544   CGAAGGCGATCTGCG         GCGTGGCGTAA TAGC TGGCGGCGCGC          TTGGTCAGCATCAGC  43 186
CX034_RS05110 NONE
CX034_RS05115 NONE
CX034_RS05120 NONE
CX034_RS05125 1053338 .. 1053348 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 154
CX034_RS05130 1054815 .. 1054825 +  -8.2  -3.13899   CGAAATCGTACATGC                 CGCC CAG GGCG                 TATTCCTGCACGCTT  56 488
CX034_RS05145 1058073 .. 1058107 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS05160 1060071 .. 1060084 +  -3.8  -3.53224   GGGTGCGCGTTCGCG               GCGA CTTTGA TCGC                TTTGACGGGCAAATG  51 314
CX034_RS05170 1061986 .. 1062001 + -10.4  -2.89881   GCAATGCGCACAGGG              CTGCGG TTCG CCGCAG               TGTGTCGAATGAATA  59 243
CX034_RS05180 1062408 .. 1062423 +  -6.1  -3.31461   GGTCCGGGTGTCTTT              GCGTG GCGAGA CACGC               TTGTCCCAGTGGGTG  53 55
CX034_RS05185 1063650 .. 1063678 + -17.5  -4.11216   GGCTCTAGAAACCAA        GGCCTTGCAACTC GAT GCGTTGCAAGGCC        TTTTAAAAATGGCGG 100 127
CX034_RS05210 1066187 .. 1066197 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 65
CX034_RS05215 1067325 .. 1067381 +  -7.9  -3.63694   AAGAGCACGCTCAGG GCCACCGCGCCGGCGCCGCG-GGCG-GCC AGC GGCCCGACATGCA-CGCCGGCGTCG-GGC TTCTTGAAGCTGCCT  60 149
CX034_RS05235 1071093 .. 1071117 +  -5.6  -3.91897   GGACAGCCTCGTCCT         GGCGCGCCAGC CGTC GC-GGCCCGTC          TTTATCCGTGCAACG  63 51
CX034_RS05290 NONE
CX034_RS05295 NONE
CX034_RS05300 NONE
CX034_RS05305 NONE
CX034_RS05310 NONE
CX034_RS05315 NONE
CX034_RS05320 1086423 .. 1086450 +  -4.7  -4.07568   CGCCCCTGCCACCTC        GGCCATCGCCT GCACGA ACGCGGCGGCC         TTTTCCGCCACGCCG  63 253
CX034_RS05365 NONE
CX034_RS05370 NONE
CX034_RS05375 1098270 .. 1098294 +  -3.4  -3.61517   GCACCATTGCAGCAC          CGCTTCGGCC GTCAG GGCCGGATCC          TTCTTCACGACGAAT  51 154
CX034_RS05385 1101194 .. 1101230 +  -5.1  -3.13403   GAGCGTGCGCGTCAG  CGGC-CGC-GGCAGCAGC CGCA GC-GTCGCCAGCGAGCCG   TCTTCGTGCCGCACC  47 132
CX034_RS05395 1103124 .. 1103150 +  -4.3    -3.445   GGAATCGTGAAGCTG         GCGACCTGAGC CGCGC GCTTAGGACAC         GTTTTTCCTGCATAA  51 17
CX034_RS05400 NONE
        mgtE 1105221 .. 1105231 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 157
CX034_RS05430 NONE
CX034_RS05435 NONE
CX034_RS05440 NONE
CX034_RS05445 1114014 .. 1114030 +  -2.2  -3.13522   GCCCGTGACAGGTAA              GGCGAA ATGAA TTCTCC              TATTGATCCCGCGAT  42 176
CX034_RS05450 1114982 .. 1114995 +  -2.3  -3.09933   TGGCGGGCTATCCCT               TGCCG GGGC CAGCA                TTGCATGGCTTGCCG  42 190
CX034_RS05455 1115421 .. 1115435 +  -7.1  -2.70932   GCGGCCGAGTAACAG               GGCTC AGACA GAGCC               TGGTTGGCAGACCCA  48 29
        priB NONE
        rpsR NONE
CX034_RS05470 1116647 .. 1116663 + -10.8  -5.75342   GCATGCCTGAAAAAA              GCCGGC CTGGT GCCGGC              TTTTTTTTCGAGGGC 100 48
CX034_RS05475 NONE
CX034_RS05480 1119082 .. 1119115 +  -2.9  -4.56597   CTGTCCGGCAAAGAT     CACCTGGGCCATCGG GATA CCGCTGGCCAGGCTC      TTTTTCGAGCCGCAG  71 160
CX034_RS05510 1125158 .. 1125172 +  -2.1  -3.07935   TCAAGGATATGTTCC               GCAAG GACGG TTTGC               TTAAATGAATCCGAT  41 3
CX034_RS05515 NONE
CX034_RS05520 1127910 .. 1127947 + -28.5  -4.26076   CAGGCTGTTTGCAAG   GGCAACCCCCGGCCGCC GCAA GGCGCCCGGGGGTTGCC    TTTTCATGGCCGTCC 100 51
CX034_RS05525 1128382 .. 1128406 + -17.1  -4.36914   GAACCGTGAAAAAAA          GCCCGCCGGCG CGA TGCTGGCGGGC          TTTTCTCGCGCAAGC 100 88
CX034_RS05530 NONE
CX034_RS05535 1130752 .. 1130769 +  -4.1  -2.52464   CAGCCACCGCTGGTA             CG-GGGTC AAA GACCTGCG             TGCCTTCGGGCACCG  40 130
        garL 1135405 .. 1135422 + -11.3   -4.0616   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTTGCCGTA  81 82
CX034_RS05620 1144662 .. 1144683 +  -2.8  -3.25072   TGCTGGCGTTGCGGG           CAGCCGGG GGGCGG CGCGGCGG            TTCGGTTATGATGCG  46 109
CX034_RS05625 NONE
CX034_RS05630 1146810 .. 1146830 + -19.7  -3.75153   CACGTGCGATCGAGA            CGGCCCGGC CCT GCCGGGCCG            TTTGCATTGCAGCCA 100 47
CX034_RS05635 1148302 .. 1148325 +  -6.6  -3.05343   GGCGTCCACGGAATA          GACGGACCAC GTTT GGCGTCCGTC           TGTTGGACATCTGCG  49 25
        pcaF 1149652 .. 1149667 + -10.4   -5.1925   CCGGCATGGCAAAAA              GGAGCC TTAG GGCTCC               TTTTTTGCGTTCTGG 100 54
        clpS 1151132 .. 1151150 +    -8  -4.19704   GACCTGATCCGCATC             GGGCGCGG TCG CCGCGTCG             TTTTGCCTGGCCTTG  74 34
CX034_RS05660 NONE
        pbpC NONE
        clpA 1160941 .. 1160954 +  -4.5  -2.94747   ACTGATCGACTGACC               GTGTG GATC CACGC                TCTCTGATCGCCTGC  45 28
CX034_RS05675 NONE
CX034_RS05680 NONE
CX034_RS05685 1164622 .. 1164650 +  -5.3  -3.16564   GACGCGAAAACAGAA        GGTTAACCTTTTT CGT ATACGGGTTAACC        TTAATACCGTACGCG  49 20
CX034_RS05690 1168872 .. 1168882 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 292
CX034_RS05695 NONE
CX034_RS05700 1171066 .. 1171098 +   -17  -2.71712   TGATCGGCCTGTGCC     GGCGGCGCGG-GCTC CCCG GGGCGCTGCGCCGCC      ATTTGCCGCAGCCGC  80 38
CX034_RS05705 NONE
CX034_RS05710 NONE
CX034_RS05715 NONE
CX034_RS05720 1174740 .. 1174769 +  -3.3   -3.9461   TGGGCGAAGTCGAGG       CCTGAGCCAGTCC GCAC GCACGGGCGCCGG        TTCTTCTTGCGGAAC  58 21
CX034_RS05730 1176823 .. 1176838 + -11.8  -5.86061   CGTTCGATTTTCAAG              CCGCCC CTCG GGGCGG               TTTTTTTTGGTGGGG 100 58
CX034_RS05750 1182842 .. 1182854 +  -6.2  -4.15565   AGACCCATCTGGGCA                GCGG CCTGC CCGC                TTTTGCCATCGTCGG  66 211
CX034_RS05760 1185731 .. 1185764 +  -5.8  -2.64616   ACGATGGCCAGCGCC     GCGCCGGCGATCTG CACCAC CAGCACGTCGCCGC      TCATCTGGCTGGCGC  45 443
        cyoB NONE
        cyoC NONE
        cyoD NONE
CX034_RS05790 1191719 .. 1191751 + -14.1  -3.53012   GCGCCACGAGCTGCG     CGCGCGACGGCGCG GCTGAG CGCGCCGCC-CGCG      TTTGCGCCCGGGCGC  78 7
CX034_RS05795 1192495 .. 1192528 +  -5.1   -4.1899   CATCCGCATCGACGG     CGGCATCACGCGCTCG GTC TGAGCGCG-GCCGCCC     TTTTCAATCCGATCC  69 4
        hutG 1193508 .. 1193542 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS05820 1198281 .. 1198302 +  -7.9  -3.78419   CGCGGGCAGGCACCA           GGCGTCCTG ATGA CGGGGTGCC            TTGTATCTTTCCTCC  66 16
CX034_RS05825 1199646 .. 1199664 + -13.8  -3.21099   CGCCAGACAAGCAAA             CGGCCGCT CGC GGCGGCCG             TTCGTCATGGGGACA  73 173
CX034_RS05840 1202138 .. 1202159 +  -2.8  -2.64616   CCTGCCCTGCGCGGC           GGGCCAGG CATGAA CCAGGGCC            TGCTGTACCTGGCGG  39 13
CX034_RS05845 1203033 .. 1203062 + -23.7  -3.53224   GGTAACTACATACCC       GGGAGCCTGTCCC AGCG GGGACAGGCTCCC        TTTGCCGCGGCAGTC 100 36
CX034_RS05860 1206087 .. 1206104 +  -2.5  -2.57344   ACCGTACCAGGCCGC             GCCGGCC TTCA GCCCGGG              ATTGTGCGCCGCGTA  38 356
        moaC NONE
CX034_RS05880 NONE
CX034_RS05885 NONE
        moaB NONE
CX034_RS05895 1213313 .. 1213340 + -21.4  -2.70932   CCGAGGGACACCGCA        GGTGCCTGTCCC CACG GGGACAGGCACC         TCGTTCACCCCCCGA 100 138
CX034_RS05910 1216724 .. 1216734 +  -5.4  -4.09243   GAGAATATGTTTTCT                 TCTC GTC GAGA                 TTTTCCGCGCCTATG  64 105
CX034_RS05915 1217360 .. 1217377 +  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 54
CX034_RS05925 NONE
CX034_RS05930 NONE
CX034_RS05935 1222603 .. 1222632 +  -7.7  -3.28712   AGCGTGTAGGCGGCC       GGCTGCACCAGCGC GCC GCGC-GCGGCGGCC       TTGTGCGCCAGCGCG  55 297
         ggt NONE
CX034_RS05970 1230039 .. 1230097 + -21.6  -4.65895   GGTGGGGGCGGCGGG CCGCCGCAGCGGCGGCCG-GCTGCCGCG ATCGG CGCGGC-GCGCGGGCGCCGCCGCGCCCG TTTTTCGGTGGCGAC 100 45
CX034_RS05975 1231377 .. 1231424 + -11.9  -2.62184   CCCTGGCGGTGGGGG TGCCGTTCGGACTGGCCGCCGG CTATT TCGGCGGCTGGACCGA-CAGCG TCATCTCGCGCGCCA  61 344
CX034_RS06000 NONE
CX034_RS06005 1236103 .. 1236118 +  -2.4  -4.10657   CAGCACCAGGGCCTT              GTCGGG GATA CCCAGC               TTTTCGAGGATATCG  61 414
CX034_RS06015 1237753 .. 1237788 +   -11  -3.97636   GCCCACGCCGACAAG    CAGGC-GCGCCGCAAGG CGG CCTGACGGCGCCGCCGG    TTTCTCCATTCCAGT  79 2
CX034_RS06020 NONE
        paaI NONE
        paaJ 1239788 .. 1239806 +  -5.9  -3.37796   GGCGTTCGCGGTGGG             CAGCGGC ATCAC GCCGGTG             TTCTCGCTGGTGAAG  55 405
CX034_RS06045 NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF 1245937 .. 1245968 + -18.8  -3.55444   GGCGGGTTCGCAGGG      C-GCAACGCCGGCCG CCA TGGCCGGCGTTGCCG      TTTCAGGGGTAGACG  95 45
CX034_RS06075 1248009 .. 1248043 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS06105 1256419 .. 1256440 + -14.5  -5.55769   TGCGCTCCCTACGAA           CGGCCTTTC GCGA GAAAGGCCG            TTTTTTATTGTCCCG 100 50
CX034_RS06110 1264462 .. 1264496 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS06140 NONE
CX034_RS06145 1270079 .. 1270102 +    -8  -3.27475   CCAGCACGTACCGGT          GCCCGTGCAG GTTG CGGCACTGGC           TGTTGTGGTCGGGGA  55 406
CX034_RS06160 1271330 .. 1271367 +  -6.8  -3.53012   AACCAAGCGCCTGCG   CGGCAGGGTGCGCGAT GACTGA AGCGCGCGCCGGGCTG    TTTGCCCGCCGGCGC  58 4
CX034_RS06165 NONE
CX034_RS06170 1272818 .. 1272829 +  -7.2  -3.72576   CGCACACCGCGTAGC                CGCG CTCG CGCG                 TTTCCTGCAGCAGCA  64 326
CX034_RS06180 NONE
CX034_RS06185 1275921 .. 1275962 + -15.7  -2.52234   GCACGGCGCCGCCCA GCGCAATGCTGCCGGCGGC CAGC GCCGCCGCCATCCATGCGC  GTTCATGACGTTTGT  69 493
CX034_RS06205 NONE
CX034_RS06210 NONE
CX034_RS06215 1281581 .. 1281634 +  -5.2  -3.86897   GCCGTTCTGGTCACG GGCGCGCTGTGGCCCTGTCGT-CCAT CGCC ATGCTGCGCCAGGCCCACGCCG-GCC TTTATGCCGCGTGCC  60 390
CX034_RS06220 1282106 .. 1282157 +  -2.2  -4.59773   TCAGCCGCCAATACG GCGCGACAGCT-CGCGGGCGG-CCT CGACC AGGACCGGC-GCGTAGCCGTCCAGC TTTTTCAGCGTCACC  70 48
CX034_RS06240 1287748 .. 1287764 + -10.8  -3.13403   GGTGCAGGACATCAT              CGCGCC CGACC GGCGCG              TCTTCGTGGGCACCG  64 138
CX034_RS06250 NONE
CX034_RS06255 NONE
CX034_RS06260 1291982 .. 1292001 +  -3.4   -3.5764   CGTGTCGTGGAACAG            CCCGGACA TCAC TGCGCGGG             TTTCCCACTGGCGTT  51 510
CX034_RS06280 1295528 .. 1295542 +  -2.7  -3.14881   CGACAGGCGCGGCGC               GCGCC CGACC GGAGC               TTCGTGACCCGATTC  44 4
CX034_RS06285 NONE
CX034_RS06290 1299339 .. 1299373 + -16.5  -2.53995   CTGCCCCCCGTATGA    CGGG-GTGCCTGTCCC CGCG GGGACAGGCACACCAG     TCAGTTCAGCTGGAT  77 61
CX034_RS06305 1301003 .. 1301022 +  -4.8  -4.57073   GCGTAGAGTTGCTGC            GCGCGCGC ATGG GCGCGGCC             TTTTTCCACCAGATG  72 359
        guaB 1306743 .. 1306780 + -22.2  -4.86731   ATCACGCAATGCATC   GCGCACCGG-CAGAACC GGCCA GGTTCTGGCCGGTGCGC   TTTTATTTCCAACCG 100 58
CX034_RS06330 NONE
CX034_RS06335 1308678 .. 1308694 +  -3.7  -4.12902   AAGTCGGTGGATTGA              TAGCTGA ATT TCAGATA              TTTTACAAATAGTTG  61 39
CX034_RS06340 1308993 .. 1309003 +  -6.8  -3.16564   AGTCCCGCAGGGTCT                 TCCG ACG CGGA                 TTGGTGACATGGGGC  52 8
CX034_RS06345 1310559 .. 1310609 +  -5.2  -3.75332   CTGGTAGGCGAGCAG GTCCATGGCCAGTCTGGCTTCG TTGGTGT CGGCGGCGAGCTGGCCCTGGGC TTTGGCTTGGCGAAT  58 232
CX034_RS06355 1312869 .. 1312891 +   -12  -3.58522   GCAAATCCGGGCTTG           CTGGCCGG GCTGTCG CCGGCCAG           TTTCGGCATCGTCAT  72 314
CX034_RS06365 NONE
CX034_RS06370 NONE
CX034_RS06375 NONE
CX034_RS06380 NONE
CX034_RS06385 NONE
CX034_RS06390 NONE
CX034_RS06395 1321232 .. 1321253 +  -2.8  -2.74999   GGCCAGTCGGCGGCC           GCCGCGCC CGGGAT GACGCGGA            TCCTGTTGCGGGTTG  40 252
CX034_RS06405 1322740 .. 1322750 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS06415 1324169 .. 1324182 +  -3.8  -3.64703   GGGCGCCAGCGAGGC               CAGC AGGGCG GCTG                TTTCGCTGGCCGCGA  54 440
CX034_RS06430 1327667 .. 1327689 + -10.4  -2.81464   AACGCAATAGGACGG           CGGCGCGGGC AGG GGCCGCGCAG           TATCATGGCTGGTCG  59 119
CX034_RS06435 NONE
CX034_RS06440 1328828 .. 1328866 +  -8.6  -2.70932   CTAGGCCGCCGCAAG   GCGGGCGCAAGGCCTCGC GCG GCCAGTCCGTGCGCCACC   TGCTTGCCGGCAACC  52 37
CX034_RS06445 1330106 .. 1330120 +  -3.4  -3.35073   GGGGACGGACCTGGA               GGCGCG CAG CACGTC               TTCCTTGCCCATGAT  47 204
CX034_RS06455 1332244 .. 1332290 + -14.5  -3.36273   CGCTGCGCGCCAGCG CAACGCCGCGGCCGTCGATGGCG GCT TGC-AGC-ACGGCCGCGGAGTTG TTGATCTTCAGGCCG  79 298
CX034_RS06465 1333804 .. 1333832 +  -2.4  -2.57931   CAGGCCGTGGACCAG       GGGCA-G-GCATGC TGA GCGTGCGCGTGGCC       ATTGTCGGCGGTGGC  38 11
CX034_RS06470 NONE
CX034_RS06475 1336012 .. 1336029 +  -5.5  -2.63596   CGACCAAGACTGAGT             CCGCGCGT CTG GC-CGCGG             TCCTGTCCAATCACC  44 28
CX034_RS06480 1337677 .. 1337691 +  -9.2  -3.44146   GATGGCCTCGAGCAG               CGCCGT GCG GCGGCG               TTCGTTGTCGCGGCG  61 408
CX034_RS06490 NONE
CX034_RS06495 NONE
CX034_RS06500 1340848 .. 1340862 +  -4.3   -2.8478   GCGGCCACGCTCGTA               CGATT CGTTA AATCG               ATTTACTAACGTCGT  44 160
CX034_RS06505 1341114 .. 1341126 +  -6.2  -3.31726   AGGGGGGGGGGGCGC                GCCG GTCCG CGGC                TGTTCTATAACGGCC  53 3
CX034_RS06510 NONE
CX034_RS06515 1343690 .. 1343711 +  -2.9  -2.94099   CGAGAAAACCGGCGG           GGCGCGC-TG AAC CATGTGGGCC           TATCTCGTCAGGCGA  41 16
CX034_RS06520 NONE
CX034_RS06525 NONE
CX034_RS06530 1347118 .. 1347138 +    -6  -3.53012   CCGCGCGCGGGAGGC            GGCCGTGG CCTGA CAGCGGCC            TTTGCGGGGGGCGGC  56 13
CX034_RS06535 1348335 .. 1348348 +  -3.7  -3.16647   TGCCCTGGGCAGCCG               GCCCG ATTC CTGGC                ATTTTCATGCCTGGA  45 85
CX034_RS06540 NONE
CX034_RS06545 1349290 .. 1349326 + -18.8  -2.70932   GCCGCCTATGGCCTG   GCG-GGCG-CGCGCTTGC GGG GCGAGCGCGGCGCCGCGC   TCGTTGACGCCGGCC  87 44
CX034_RS06555 1351110 .. 1351124 +  -3.4  -3.57144   CGCGCTCGCGCAGCG               CCGCCG TCA CGCTGG               TTTCGGCCTGGAACC  51 498
CX034_RS06565 1352700 .. 1352710 +  -2.4  -2.80816   CGAGAACACCTCGAC                 CCTG GCG CCGG                 TGTGCTACCTGCAGG  40 310
CX034_RS06575 1353010 .. 1353025 +  -3.2  -4.00066   GCGACGCAATCGGCG              CGCTAT TGTT AAAGCG               TTTGTCAGTTGTCCA  58 98
CX034_RS06580 1354187 .. 1354221 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 439
CX034_RS06590 1355819 .. 1355856 +  -3.9  -3.56594   GGTGCCCATATAGTC   GGCGGCCGCGGCCTGGGG CAG CGGCGGGTTG-GGCCGGC   TTTGGGCGAATTTCA  51 491
CX034_RS06600 1358189 .. 1358202 +  -8.1  -3.28712   CGACCAGGTTGCCCA               GCACG ATGC CGTGC                TTGTGGCCCAGGCCC  55 237
CX034_RS06610 NONE
CX034_RS06615 1360092 .. 1360110 +  -2.4   -2.8655   GAAAGCGATGATGCC             TTTCGCTT GAT AAGGGAGA             TCTACTATGCCTCGC  40 16
CX034_RS06620 1360501 .. 1360531 + -16.2  -4.09685   TACATCGCGGATCGC       TGCAAACGGGGCTG TAA TGGCCCCGTTTGCG       TTTTGAAGGCTCAAA  95 50
CX034_RS06625 NONE
CX034_RS06630 NONE
CX034_RS06635 1364342 .. 1364355 +  -2.3  -3.88137   CCGGACCCCGCCTCT               GCGGA GTGA TACGC                TTTGTCGGCAATTGT  54 17
CX034_RS06640 1364855 .. 1364884 + -15.8  -4.41047   TACGGCAGGCCGCGA       CGCCGCCTGGTTC TTCGC GAACC-GGCGGCG       TTTTCCTTGGGCGCT 100 61
CX034_RS06645 1365076 .. 1365110 +   -26  -3.45027   CCCGACCAGTAGTTC     CAAGGCCGTCAGTGAT CAC ATCACTGACGGCCTTG     TCTTTCGTGGGGACT 100 33
CX034_RS06655 1367192 .. 1367225 + -15.9  -3.14564   AACTGGAGCTGTAGT     CCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGC      TTCCTCGGCCCGTGC  78 27
CX034_RS06665 1368771 .. 1368794 +  -8.8  -2.58892   TGCCGGGGCGGGGCT          GTGCCGCC ATGCGCGA GGCGGCGC           TCAATTGATCTGCCT  52 263
CX034_RS06670 1369131 .. 1369154 + -14.6   -5.0925   CAACCAGATCAAAAA          GGCTTGGCGA TTCA TCGCCAGGCC           TTTTTCGTTTTCGCA 100 35
CX034_RS06675 1369938 .. 1369983 + -12.7  -3.05844   ATGTAGAACTGGATG CGCG-CG-ATACGGCCGCGCA CGTACT TGCGCGGCTGTATGCGGCGGG TCTTGAAGTCCACGA  66 360
CX034_RS06685 1370826 .. 1370856 + -10.4  -4.86621   GCCGCACCGTGCGCA      GCCGCC-TGCCGC GATAGG GCGCCAAGGCGGC       TTTTTCATTGGGCGT 100 59
CX034_RS06690 NONE
CX034_RS06695 1371831 .. 1371847 +  -7.3  -3.20348   TTTGGGGTCGAATAA              TATGCGC ATT GCGTATA              TTCCGTATTCCTCCC  52 89
CX034_RS06700 1373160 .. 1373218 +  -7.9  -4.07568   TTCCGTCTTCCACGG CCTGGACTGA-GCCGTATCGCGTGGCGC GCCA GCGCCACGCGAGCCCGCGTCAGACGCGC TTTTCCCCGCCCAGC  69 16
CX034_RS06710 1374833 .. 1374853 +  -6.8  -3.40403   GCGGGCGGGCTGGTT           TCGC-CGCC CACC GGCGCGCGG            TTGTAGTGAAAGGGC  55 180
CX034_RS06725 NONE
CX034_RS06730 NONE
CX034_RS06735 NONE
CX034_RS06740 NONE
CX034_RS06745 1380972 .. 1380982 +  -3.2  -3.05384   ATTGCCCTGTGGCGC                 TCGA CGG TCGG                 TTGAGTCCGCAGGGG  42 11
CX034_RS06750 NONE
CX034_RS06755 NONE
CX034_RS06760 1384767 .. 1384781 +    -7  -5.15969   CTATGCGGGCTTGCT               GCCCCC CGA GGAGGC               TTTTTTGCCTTGGGG  93 161
        recA NONE
        recX 1390826 .. 1390872 +  -9.3  -3.33815   CGACTGAACGATGCC GCTTCGTGCGGGCGGCGGCGCGC GAT GCGGGC--CCGCCTGCCTGGGGC TTGCTTGCGGCCCGT  61 34
CX034_RS06795 1394405 .. 1394425 +  -6.7  -3.40403   GGTCGGCCCGGGCCG            CGTCGCCGG CAA TCGGCTGCG            TTATACTCCCCAGGA  56 153
CX034_RS06800 NONE
CX034_RS06805 NONE
        sucD 1397188 .. 1397207 + -16.4  -5.78622   CCGCCTGTCCCAGGA            CGGCCCGC GATC GCGGGCCG             TTTTTTTTCGCATGC 100 57
CX034_RS06815 1398149 .. 1398191 + -23.5  -5.07652   GCTGAACTACAATAG CGGGCTGTTCGGGCCCCGCC TTCA GGCGGGG-CTGACCAGCCCG TTTTCTTTTGGCCGC 100 47
CX034_RS06820 1399072 .. 1399105 +  -5.9  -4.03413   GTTCGTGCTGGCCAT     CCTGGGGGTGGTGGC TTCG GTCATCGTCTCCAGC      TTTCTCTGACGCCCT  66 92
CX034_RS06825 NONE
CX034_RS06830 NONE
CX034_RS06835 NONE
CX034_RS06840 1403693 .. 1403710 +  -2.6  -4.23781   TCCGCCGGCCCGGCG             TCCGGC GACAAA GCCTGA              TTTCATTTTCATCAA  62 8
CX034_RS06845 1404303 .. 1404344 + -23.8   -4.2231   GCCTGGGGCGGCCGG CGGCGCGGAAGCGA-CGGC AGGCA GCCGCTCGCATCCGCGCCG TTTTGCGTCATGCTT 100 53
CX034_RS06850 NONE
CX034_RS06855 1405348 .. 1405367 + -12.8  -5.07652   GCCGGCATGATGCAA            GCCCTCGG TCAT CCGGGGGC             TTTTCTTTTGCCGCG 100 50
CX034_RS06860 NONE
CX034_RS06865 1407253 .. 1407291 +   -11  -3.01712   GGGTCGCGGCGTTCA  TGGCGG-CCGCGGCGGCG CCGTC TGCC-CCGCGCACCGCCA  TCTTGGCGCGGCAGG  62 185
CX034_RS06875 NONE
        cpaB NONE
CX034_RS06885 NONE
CX034_RS06890 1413029 .. 1413042 +  -8.1  -3.53012   GCTGATCCGCCGCAT               CGTCG CCAT CGACG                TTTGAGGAGCCGGGC  60 7
CX034_RS06900 NONE
CX034_RS06905 NONE
        folD 1416419 .. 1416433 +  -3.4  -3.75933   CGTGCGATCGGAGAA               ATCGCC GCC GGCGGA               TTTGCTCGCGTCTAT  55 187
CX034_RS06930 NONE
CX034_RS06935 NONE
CX034_RS06940 1424160 .. 1424170 +  -6.8  -3.07816   CGTCGATATCGAACG                 GGAG CGT CTCC                 TTGGATAACTCGCAC  51 7
CX034_RS06945 NONE
        purU NONE
CX034_RS06955 NONE
CX034_RS06960 NONE
CX034_RS06965 1428942 .. 1428963 + -14.5   -5.1287   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 53
CX034_RS06975 1430339 .. 1430361 +  -9.8  -3.40403   CTTACAGGCCCAGTA           CGGCCTGCAT GTC GTACAGGCCG           TTGTCCTGGCGCGCC  65 76
CX034_RS06990 1432276 .. 1432297 + -15.9  -6.10489   GCTCTACCAACCCTG           CCTCCAGGC GCAA GCCTGGAGG            TTTTTTTTTGCGGTT 100 48
        hrcA 1436060 .. 1436077 +  -5.5  -3.54382   GCCTGCGCGCGGGGC             GGCGCCT TGAG AGGTGTC              TTCGTGTTTCTTCGC  54 62
CX034_RS07010 1437194 .. 1437211 +  -8.3  -2.52676   CTGTGGTTGAAGCGG             CGGGCGC GAGC GCGCCGG              TCCATTCCGCGAATG  51 50
CX034_RS07015 1437522 .. 1437547 +  -3.8  -5.52384   GGGCGGCGACGCGCC         GTCCGGCGGC GTCATG GGAGCCGGGC          TTTTTTTCCTGGAAA  90 54
        grpE 1438167 .. 1438211 +  -5.6  -3.05384   GTCCGGCGCTGGTCG TGGTGTCCGCCGGCCAGGGCTG AAG CAGGCATGGCCGCCGC-C-CCA TTCGATCCCGCCGAG  47 3
CX034_RS07025 1438607 .. 1438625 +    -3  -2.78725   AACTCCAGTTACTGG             GGGACTGA GTT TCAAACCC             TGATTCCTACCGTAT  40 55
        dnaK 1440610 .. 1440652 + -18.5  -3.27298   GGCCGAACGATGACG TGCGATACGCCCGGTAGCTG ATTC CAGCTACCGGGCGCG-CGCG TTGATGATTCAGAAC  93 42
        dnaJ 1441895 .. 1441924 + -22.3  -2.88249   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 93
CX034_RS07045 NONE
CX034_RS07050 1446195 .. 1446226 +  -7.9  -3.85864   TGGGCCAGGCGTCGA      GCA-GCCGGCGCAG CCAGA CCGCGCCGGCCTCC      TTGTTGTAGTGCTCG  67 187
CX034_RS07070 NONE
CX034_RS07075 1450065 .. 1450093 + -16.7  -4.38712   CCAGTAAGCGGCGCC        GGGCAAGCCCCCG ATC CGGGGGCTTTTCC        TTTTCTAGCGCTCGG 100 34
CX034_RS07085 1452017 .. 1452041 + -11.4  -5.02074   GCATCAGCCGAGAAA         CCCGC-GCCCC TATG GGGGTAGCGGG          TTTTTTGCCGAATGG 100 60
CX034_RS07090 1453219 .. 1453236 +  -3.3  -2.74864   TGTGGGATTCCGTTT             CGGGTTG AGGC CGGTCCG              GTATTTGCTTCTACA  40 83
CX034_RS07095 1454587 .. 1454597 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS07100 1455969 .. 1455991 +  -7.6  -3.17212   CGCGCAGGCGCGCCA           GCAGTTCGCC GAC GCCGAACGGC           TTGGTCAGGTAGTCG  53 393
CX034_RS07135 NONE
CX034_RS07140 1466998 .. 1467032 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS07170 NONE
        lolA 1473988 .. 1474008 +  -3.3  -3.05596   CCTGCGGGCCAAGGC           CGCCGCAT GGTGTA ATGCG-CG            TTGGATCCGCCCGTG  42 74
CX034_RS07180 NONE
CX034_RS07185 1476812 .. 1476829 + -11.3  -4.98531   CACGTGAACCAGAAA             CGGAACC CGCG GGTTCCG              TTTTTCATTTCGGCG 100 54
CX034_RS07190 1477452 .. 1477469 + -14.1  -4.95957   GTGCCGCAAAAAAAG             GCCGCCC ATCC GGGCGGC              TTTTTCATTGATTTG 100 167
CX034_RS07205 1478860 .. 1478873 +  -9.5  -3.28791   GCCAGGAAGGCTGAC               CGGCC CGCG GGCCG                TTATGCGCCAGCCGT  61 27
CX034_RS07215 1480501 .. 1480522 +  -7.3  -2.78463   GGGAAGAACACCATC           TCGCGCGCCA TGC TGG-GCGTGA           TCTGCTGCAGCGCCT  49 352
CX034_RS07270 1493636 .. 1493684 +  -6.6  -2.70932   CCGCCGCGGACAACG AGGAGCGG-TCCG-GCCCGGGC TGACCGC GCCCGGTCACGGATCCGTGCCA TCATTGCCGGCGGCG  47 3
CX034_RS07275 1494564 .. 1494574 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS07280 NONE
        yaaA 1496379 .. 1496416 +  -3.4  -4.21812   CGCAAGCAGGCCTGA  CAGGACG-CGCG-ATGTC GGCA GGCTTACGCGTCTTCCTG   TTCTTTTCGCTCGGC  63 26
CX034_RS07290 1498100 .. 1498114 +    -7  -3.72576   CGGCGTCGGCGCGCT               CGCCGG TCT CGGGCG               TTTCCTCGCCCGCCG  61 494
CX034_RS07300 NONE
CX034_RS07305 1501658 .. 1501692 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        thrS NONE
CX034_RS07335 1506946 .. 1506982 + -19.3  -3.05463   CAGGCTGATCCCATC    CCCGGCCCGGTTGCCCT CGA GGGGCGTCCGGGCCGGC    TTGCGTGCGGCCCGT 100 33
CX034_RS07340 1508038 .. 1508051 +  -3.1  -2.87243   GCCGGCTGAACTTGC               TGCTA TGAC TGGCA                TCGTTATCGTCGTGC  41 32
CX034_RS07345 NONE
CX034_RS07350 1508842 .. 1508868 + -10.8  -2.62735   AAAACCTCAGGTTCC         GGCAGCCCGC CGTCGGC GCGGGCTGCA         TCGTCTACGCGCTCT  59 42
        ptsP 1510663 .. 1510680 + -10.5  -5.64006   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT 100 47
CX034_RS07370 NONE
CX034_RS07375 1513828 .. 1513846 +   -16  -5.31275   GGGCGCGGCAATGCG             GGCAGGCC TTG GGCCTGCC             TTTTTTGTCGTCAAA 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
CX034_RS07395 1516986 .. 1516996 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS07400 1518240 .. 1518280 +  -5.9  -3.29144   CGGGGCGGCCCTCGG  GATGCCGCGGGAGGTCATC CGT GATGTCGTGCCACGGCGCC  TTGTGGGCGACGTAG  53 265
CX034_RS07435 1524174 .. 1524189 +  -7.5  -2.71011   GCGGAACAGGGACCG              GCGCG CCGTCC CGCGC               TGATTGCGAAGGGAT  51 7
CX034_RS07440 1525440 .. 1525459 +   -15  -5.15634   CGCCCGCATGGAAAA            CCGGACGC GCGA GCGTCCGG             TTTTTTCATGGCCTC 100 72
CX034_RS07450 1527051 .. 1527077 + -17.3  -5.26875   GCCGGCGCCGTCCAG        GCCCGC-CGCCC TTCG GGGCGCGCGGGC         TTTTTTCATTGGAGG 100 46
CX034_RS07455 NONE
CX034_RS07460 NONE
CX034_RS07465 1527986 .. 1528004 +  -4.4  -2.77523   CCGTGCCCTTGCCGC             TGGCGCTC TGA GTCCGCCA             TGATCTTCCTGCGCA  43 15
CX034_RS07470 1528587 .. 1528604 +  -9.1  -3.41836   AAAATAGCCGATTCG             CGGC-CGC CTG GCGGGCCG             TCTTTCCATCCCTAT  63 129
        purE NONE
CX034_RS07480 1530330 .. 1530344 +  -3.4  -2.60075   GCGCTGGGCATGGCC               GCGCCG CTC TGACGC               ATTGATTCCCGCCGC  39 14
CX034_RS07485 1531429 .. 1531445 +  -7.2  -2.62184   AACTCCTGATTGCCG              CGCCTG CCGGC CGGGCG              TAATCTCACGCGGAC  47 56
CX034_RS07490 1532569 .. 1532606 + -10.5  -3.06162   CTAGGGCGAGGGCGG   CGGGGCGGGCAAGATCGC CAA GCGATAC-GCCTGTCCCG   TATTGCGGTACGCTA  60 37
CX034_RS07495 1533510 .. 1533528 +  -5.9  -3.62518   GTATTTGATGGGAGA             GCAAGGG GAATA CCCTAGC             TTTCCGGATCTTTCG  59 50
CX034_RS07500 NONE
CX034_RS07505 NONE
CX034_RS07510 NONE
CX034_RS07515 1536898 .. 1536921 + -19.6  -2.75064   TGGGTTGAGCCCGGC          CTGCCGCGCG CGCC CGCGCGGCAG           TGGTTCCATGGCCGG  93 33
CX034_RS07520 1538608 .. 1538638 +    -9  -3.89956   CCGGCACGCCGGGCG      CGATGCCGC-CGCG CAACA CGCGGGCGGCG-CG      TTTGGTCTATCCTGC  73 55
CX034_RS07525 1539252 .. 1539291 + -12.1  -3.73072   GCACGCGGGGAAGTT  TGCCG-GTGCCAGTCCCC CTTGC GGGGACAGGCACGCGGGG  TTTAGTAGAAGGCTT  77 122
CX034_RS07540 NONE
        xerD NONE
        ybaK 1544852 .. 1544874 +  -9.1  -2.94144   TCGTCGCATGACCAG          GCCGGCGCGT TACG GCG-GCCGGC           TCCTTTCCATGGAGA  56 100
CX034_RS07555 1545448 .. 1545462 +  -5.6  -3.57144   CGCAGTTCCTGGCGG               TGCTGG GCA CCCGCA               TTTCGCACTGACCCC  54 0
CX034_RS07560 1545982 .. 1545992 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS07565 1547456 .. 1547474 +    -3  -4.07885   CGGATAGTTGCGGCC             CAGCGC GTGGGCG GCGCGG             TTTTCCGAGGACATC  58 485
CX034_RS07580 1550166 .. 1550180 +  -9.2  -3.28712   AACTGGGAAAACATC               GCCGCG CTG TGCGGC               TTCTAGGCCGCGCGC  61 187
CX034_RS07585 NONE
CX034_RS07590 1556781 .. 1556839 + -24.1  -2.71731   TGATGGGTCCGGTCG -G-GCCGGGGCTCGCCAGCTACGCATTCT GTT AGAATGCGTAGCTGGCGGGCCCCTTCGCA TGGTTCGGCGGTGAA 100 521
         ffs 1556950 .. 1556985 + -10.7  -2.70932   AGGGGCGCCGTGACC   GGAATGTATCGCGATCC AGGC GGATCGC-AT-CATTCC    TGGTTGCGGCGCCCC  60 54
CX034_RS07600 NONE
CX034_RS07605 1559554 .. 1559588 + -13.5   -2.6927   GCTGCCGTTCTGATA    TCGC-CTTGGCGGCCC AGCC GGGCCGCCGGGCGCGC     TGCTGTCTGCGCGAT  67 28
        recR 1560245 .. 1560255 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS07615 1561448 .. 1561477 +  -2.7  -4.13767   CGCCGTCCTCGAGTA       TGACC-AGGCGGGC GTT GCGCGCATCGGCCA       TTTTCACATCCGACA  61 214
CX034_RS07635 1564496 .. 1564530 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS07675 1572164 .. 1572216 +   -11  -3.28791   CGCGCAGGCATGCTG CGCCGCGCGGCCATCCGGCGGGGCC GCAA GGCGCCGCCGGGCA-CCGCCCGATG TTATCCCCGGCAAAT  66 298
        mutS NONE
CX034_RS07690 1577093 .. 1577114 + -15.9   -4.4078   GGGCAGGCATGCTAA           TGGCCTCCG GTAA CGGAGGCCA            TTTTCATTGCGCGAA 100 520
CX034_RS07695 1577895 .. 1577918 + -18.2  -5.40474   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 50
CX034_RS07715 NONE
        glnH NONE
        glnP NONE
        glnQ 1584373 .. 1584394 +  -8.8  -3.05844   GTGGAAACCGCGTCG           TCGTGCAT CGTGAC ATGCACGA            TATTGGCGTCGGCCG  55 165
CX034_RS07760 1590195 .. 1590206 +  -4.4  -3.35679   GTTCGTGGGACGCGG                CTGA GGTT TCAG                 TTCTCGCTGGCGGCC  51 22
CX034_RS07770 1592953 .. 1592963 +  -3.2  -3.89614   TTACGCTCGGCTTTG                 GTCA GAT TGGC                 TTTGTCGCCCTTGGC  58 441
CX034_RS07795 1595716 .. 1595742 + -12.2  -3.05384   GCGCAGCGCCGCCAC         CTCGGCGTCGCC CGG GGCGGCGTCGAA         TTCGGTGAGGCCGGC  66 492
CX034_RS07805 1597993 .. 1598009 +  -6.5   -4.8083   AACTTGCGGCCGCGC              TGTCGGC CAC GCTGGCA              TTTTTCGTGCTGTTG  82 139
        rdgB 1602136 .. 1602146 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS07825 NONE
CX034_RS07830 1604500 .. 1604522 +  -7.6  -4.16842   CCAGGAGTGCGGGAC           CTGGCACGCA TTT TGCTTGCCTG           TTTATTGCCAGTCGG  74 133
        glnA 1605992 .. 1606044 + -22.1  -3.11634   ACTACAGCCTGTAAT CCGGGAGGCTGTGCGGCG-GCGGGCC TCGC GGCCCGCCCGCCGCGC--CGTCCCGG TTGCCTCCTATGACG 100 27
CX034_RS07840 NONE
        ntrC NONE
CX034_RS07855 1610428 .. 1610450 + -11.9  -4.56597   TGCCGTAAAGTGAGA           CGGGCGCCG CCAGC CGGCGCCCA           TTTTTCCACGGCGCG 100 33
CX034_RS07860 1611592 .. 1611626 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 214
CX034_RS07885 1617235 .. 1617248 +  -9.5  -5.27335   CGCCGCCAGGAAAAG               CCGCC TTCG GGCGG                TTTTTCTTTGGCCGC 100 48
        dkgB 1620729 .. 1620746 +  -2.6  -3.65351   GAGGGGTGGGCGTAT             TGCTGG ACAAGA CCGGCG              TTTCGCTGACGCTGG  51 478
CX034_RS07910 NONE
        recG NONE
CX034_RS07920 1626500 .. 1626526 +  -9.4  -3.14132   GGCCGGCGTGGCGAA        GCCC-GGCCGG AAATGC TCGGCCAGGGC         TTGCTCGACCACGCG  59 58
        mmsA 1629038 .. 1629067 + -18.6  -2.67316   GTTCGGGCTGAGCGC       GCGCCGGCGCGGC CGGGC GCCGCGCCGG-GC       TGCCTTGTTGCGTTC  87 30
CX034_RS07935 1629654 .. 1629675 + -15.9   -5.4505   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 47
CX034_RS07960 NONE
CX034_RS07965 NONE
CX034_RS07970 NONE
CX034_RS07975 NONE
CX034_RS07980 NONE
CX034_RS07985 NONE
        tviB NONE
        tviC 1644978 .. 1645028 +  -2.7  -3.07816   GCCGCCATGCCCTGG TACACGCAATTCCTG-CG-ATGA TCGAGCT TCATTCGTCAGGCATCGCGCGTA TTCCGTACCTGACGG  42 5
CX034_RS08000 1647063 .. 1647081 +  -5.2  -3.13403   GATGAGCCGGAGCAT             GGCATGAG CGC CTCGTTCC             TGTTCCTGCAGGGCG  49 36
CX034_RS08005 1648259 .. 1648269 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 43
CX034_RS08010 NONE
CX034_RS08015 NONE
CX034_RS08020 1651820 .. 1651854 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS08085 NONE
CX034_RS08090 1665208 .. 1665244 + -11.4  -3.01712   TATGCGCCCGATGCC    GTCGTGCGGGCGCTGG ACGCG CCGGCGCTGGCGCGCC    TGTTCGCGGCCAGCG  65 427
CX034_RS08100 NONE
CX034_RS08105 NONE
CX034_RS08110 NONE
CX034_RS08115 NONE
CX034_RS08120 1671857 .. 1671883 + -22.3  -3.05384   GGCAAGTAGGCGCGG         GCGGGCGCGGG CGGGC CCCGCGCCCGC         TTGCGTCGCGCACGC 100 32
CX034_RS08135 1674571 .. 1674618 +  -5.4  -2.73468   ACGGCGATGACCGCG TGCGCGGGCTC-CAGCCGGGT GCTCACG GTCAGGCGGCGCGCTCGCGCA TGCTTGAGGATATTG  43 191
CX034_RS08150 1680386 .. 1680406 +  -8.2  -3.34895   CGATGGCGGCATCTT            GCCTTGGC GAATG GCCACGGC            TTGCTTCAGGCTGGC  59 267
CX034_RS08170 1682512 .. 1682550 + -10.1  -3.65351   GAACCGGTCTGAGCG  CCGGGGCGGCGGCG-CCC GCAT GGACCGCCGCCGTCGCGA   TTTCCATGACGGTGC  67 29
CX034_RS08200 NONE
CX034_RS08205 1689216 .. 1689257 +  -3.7  -2.71791   CTCGACATCAACGGC GG-CGCCGTGATGCTC-TG ACACGC CATGCGCATCGCAGCGGCC ATTTGCACCAAAACT  41 8
CX034_RS08210 1690635 .. 1690649 + -12.8  -4.15044   GTCGCACTGCGCCAG               CCGGGC GTA GCCCGG               TTTCTTCAGGCGCGC  86 383
CX034_RS08220 1692579 .. 1692594 +  -5.4  -3.67597   CAGTCGGTGCCGGCC              GG-CCTG CCG CAGGGCC              TTGTTCCCTGGGAGC  57 286
CX034_RS08230 1694314 .. 1694348 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS08270 NONE
CX034_RS08275 1701877 .. 1701889 +  -4.8  -3.01712   CAGTACGATATCGTG                CTGG CGCGC CCAG                TCTTCCACCCCCGCG  46 363
CX034_RS08285 1702899 .. 1702909 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS08290 1704386 .. 1704441 + -11.7  -4.07568   CCAGCGTATAGCCGT CCGGGGTGGCCTTGGCCAGCGCG-TCG GCGC CGATCGCGCCG-CCGCCGCCGCCGCGG TTTTCCACCACGACC  82 498
CX034_RS08300 1707998 .. 1708011 +  -2.3  -3.01918   CGCAAACCGGGAGTC               CTGCC TGAT GGAAG                TCGTTTATGCCCTGG  41 18
CX034_RS08305 NONE
CX034_RS08310 NONE
CX034_RS08315 NONE
CX034_RS08320 NONE
CX034_RS08325 1711146 .. 1711156 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 117
CX034_RS08330 1712193 .. 1712218 +  -8.2  -2.70932   TATGGTAGAAAGGTC         AGCGGCAGGCC ATGAC GGCC-GCCGCC         TACTTCAAGGAGCGA  52 58
CX034_RS08335 1712811 .. 1712826 +  -4.6  -2.84454   CGCATTCAGGCAAAA              TGTCGG CTGT CCGACC               CTTTAAGTCCTTTAT  44 90
CX034_RS08340 NONE
        tadA NONE
CX034_RS08350 1715191 .. 1715237 +    -7  -4.56597   AGCACACCCACTGAA CGCAGGCCCCGCTACGTGTCCT GCC GGGGCACCCAGGCGGGCTGGCG TTTTTCCAGGAAAGA  77 27
CX034_RS08375 1721803 .. 1721846 + -12.2  -3.28924   GGCATCGAGGCGTAA GCGGGGCGCCCGC-GCGCGGC CTG GCCGCGCCGCCCGCGGCATGC TTATAACGACAGGTA  71 26
CX034_RS08380 1722766 .. 1722789 + -17.4  -2.61695   TCATACCGATACCGT          GTCGCGGGCC CGCC GGCCCGCGGC           CTATTTGCCGATCCC  80 57
CX034_RS08385 NONE
CX034_RS08390 1724592 .. 1724614 + -11.9  -3.15544   AATACGTCTGAACCA           CGCGCGGGC CTGGC GCCCGCGCC           TTCATCGCCATGACC  66 30
CX034_RS08400 1726961 .. 1726989 +  -2.9  -3.59738   GCCTTGGCGCGCATG        GCGTCCTTGACCG AGT CGGACAGGCGGGC        TTTGAGCGTATCGTG  50 464
CX034_RS08410 NONE
CX034_RS08415 1728858 .. 1728895 + -11.4  -2.67021   GTAGGTCCGGCCGCG  CCGG-CGGCGGCC--AACC TTA GGTTATGGCCGCTGTCCGG  ATTGCTATTTGGCGC  61 37
CX034_RS08420 1730477 .. 1730487 +  -8.2  -3.06796   GCATCCAGCAGTTCG                 CGGC GCT GCCG                 TTCGATCAGCTCGGG  55 248
        mltG NONE
CX034_RS08445 1736888 .. 1736907 +  -2.8  -3.16564   GAGCTGGTGGCGCAA            GCGGCATGA GCC TCG-GTCGC            TTCCTGCCCTGGCAG  44 17
        holB 1737950 .. 1737963 +  -9.5  -4.03078   CCTGCCAGTGACGAT               CGGGC CACG GCCCG                TTTCTCCTGTGATCC  75 30
CX034_RS08455 NONE
CX034_RS08460 1739721 .. 1739740 +   -15  -5.52384   CTCCACCTGATCACG            TGCCGCCC ACCG GGGCGGCA             TTTTTTTGCTCGGGG 100 94
CX034_RS08465 1740602 .. 1740619 +  -5.6  -4.67982   GATGTATCCCTGTGG             CCGTAT CCATCC ATACGG              TTTTCTTCACTCCAA  77 39
CX034_RS08470 1741570 .. 1741585 +  -2.5  -3.90744   CATCTACAACCTGTG              CAGCG TATACC TGCTG               TTCTTTCGCGGCACG  56 189
CX034_RS08480 1742916 .. 1742972 +  -7.3  -3.65902   GATACGCGCCGCCTG GCCCA-CATCGT--CG-CGCTGGGGCAGG ACG CCGGCGCCGGCGACGCCGCGGTGCTGGGC TTTGCCTGCGATGCC  61 100
CX034_RS08490 1745311 .. 1745339 + -19.6  -3.04398   CGCATCGGCGTACCA       GGCAGCCGGCCCC GCAA GGGGCCGGC-GCC        GTTTTCAGCGCAGGC 100 68
CX034_RS08570 NONE
CX034_RS08575 1760952 .. 1760968 +  -2.9  -3.71645   TTGTATCCTATGGCT              TGGATGG CAT CGGTCCA              TTTCAATATGACGTT  53 98
CX034_RS08580 1762036 .. 1762060 +  -6.3  -5.24129   GGCCGTCGATTTCGG          GTGAGGGGCCA GCC TGGCCTTGCGC          TTTTTTCTCCAGCGC  93 173
CX034_RS08605 1778057 .. 1778067 +  -3.2  -4.45261   ATGGTCGGCTTGTCA                 CGAG ATT CTTG                 TTTTCCATTTCTTTC  69 85
CX034_RS08610 NONE
CX034_RS08615 1781663 .. 1781694 +    -3   -3.9941   GAGCCAGATATTCGC     TGAC-CGC-CGGGC CGCCGT GCCCGCGCGCGTAA      TTTCCTTCTGCGGGG  58 23
CX034_RS08620 NONE
CX034_RS08625 1784544 .. 1784559 +  -4.6  -2.78384   GCGAGAACGCGGCCG              CGACGC TACA GCGTCA               TGTGCTGCGGCAGCC  43 46
CX034_RS08670 1792773 .. 1792801 + -14.6   -3.6106   AATCCATCATGCATC       GGCGCGCG-CCCGC TGG GCGGGGCGCG-GCC       TTTCCCCCTGTTACG  81 40
CX034_RS08675 1796498 .. 1796555 + -16.2  -2.71712   CGGGCACACCGTCAC GCGC-AAGGCGGGCTGGTCGCGCCGGT CATGC ACCTGCAGGGTCAGCCCGCCATCGCGC ATTTCGAACAAGGCG  77 63
CX034_RS08690 1799670 .. 1799716 +  -8.6  -4.18018   CCACGCCCAGCGCGC CGCGCAC-CGCGTGGTTGCCC ACCACC GAGTAGCCGCGCGCGCGCGTG TTTTCGATCAGGCGG  75 197
CX034_RS08700 1801452 .. 1801469 + -12.7  -4.19735   CTCGAGCGTGAAGAA             GACGCCC GCGA GGGCGTC              TTTGCTTTTGGAGCC  91 53
CX034_RS08710 1803368 .. 1803381 +  -9.5  -2.81966   GGATGCGCGGCCGCG               CGCCG TCAC CGGCG                TGTCATGGCATTTCC  56 85
CX034_RS08715 NONE
CX034_RS08720 1805913 .. 1805938 + -19.1  -4.56597   TACGCCAAATGAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 29
CX034_RS08740 NONE
CX034_RS08745 NONE
CX034_RS08750 1811608 .. 1811618 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS08755 NONE
        tilS 1813775 .. 1813797 +    -9  -3.28924   AAAATACTCAGCTTT           GCCCGCCCAG ACC CTATGCGGGC           TTGTCAGCCAGAGTA  61 83
CX034_RS08765 NONE
CX034_RS08770 1815271 .. 1815292 + -14.5  -5.45802   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 37
CX034_RS08780 NONE
CX034_RS08785 NONE
CX034_RS08790 NONE
CX034_RS08795 NONE
CX034_RS08800 NONE
CX034_RS08805 NONE
CX034_RS08810 NONE
CX034_RS08815 NONE
CX034_RS08820 NONE
CX034_RS08825 1825013 .. 1825023 +  -2.4  -2.66316   TTCATTGAGCGTGGA                 CACC GAC GGGG                 TGATGTCGTGCACCA  38 477
CX034_RS08835 1827138 .. 1827180 +  -8.2  -3.25073   CACAGCGGCGGCTAT CCCGCGCGCCAGGCGCTCG AACAGG CG-GCGCCCGGCCGGCCGG TGTTCCTGTTGCGCC  58 408
CX034_RS08845 1829215 .. 1829237 + -10.6  -2.70932   TCGCTGTTCGGTGCG           CCATGAGCGT GCG ACCCTCATGG           TGGTTCGCCGCGGCG  60 20
CX034_RS08850 NONE
CX034_RS08855 1831128 .. 1831144 +  -5.1  -4.12198   TCCCTTACAGGCGGG              CAGGC CGGCGGC GCCTG              TTTTACAACCTTGTA  64 45
CX034_RS08860 1831324 .. 1831351 + -18.6  -5.04385   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC 100 83
CX034_RS08905 NONE
CX034_RS08910 1839984 .. 1840004 +  -4.5  -3.19157   TTGCCGCTGCATGGG            CGGCCCGCT CCA GGCGGCCAG            TTCGTCCGCTTCGTC  47 99
CX034_RS08935 1846320 .. 1846333 +  -9.5  -3.53091   CCTGTATCGCCGCAC               CCGCC GCCG GGCGG                TTTGAAAAGCCGGCT  64 7
CX034_RS08940 1846476 .. 1846500 + -17.2  -4.98531   GCGCCAATATGAAAA          GCCGCCATGC CTTGT GCATGGCGGC          TTTTTGCTTTGGGCG 100 35
CX034_RS08945 1847186 .. 1847205 +    -5  -4.20696   AAAATACTAGGCGAA            TTAAAGCG TCAA CGCTCTAA             TTTTCGGCTTGGTCG  66 43
CX034_RS08950 NONE
CX034_RS08955 1849827 .. 1849852 +  -3.3  -3.61517   TGCGGCTACCGCCGC        TGGC-G-CGCC TGAACC GGCGACGGCCA         TTATTCGCGCGAAAT  49 82
CX034_RS08960 NONE
CX034_RS08965 1852986 .. 1853000 +  -3.4  -3.96051   GCGCGGCATCATCAA               CGAGGC TAC GCCATG               TTTCATCTGTTCTGT  58 131
CX034_RS08970 1854032 .. 1854060 + -15.2  -3.53012   GGGCGCAACCATCCC        GCTTGCCCGGCC CCGGC GGCCGGGCGCGC        TTTCCGGAGCAGGCG  81 41
CX034_RS08975 NONE
CX034_RS08980 1856132 .. 1856180 + -18.2  -2.90075   GGTGCTGGCCGAGGT CGTGC-CCTAGGGTGCCTGTCCC TGCG GGGACAGGCACCCTTGCCGCAGG TGTCGTTCCCCGGGC  86 16
CX034_RS09010 1864860 .. 1864888 + -10.1  -3.06915   CAGAACGTTCAGGCC        GCGGGCGCGCCGC ATG GCGGCGTGGTGGC        TTCGGTCGCCTACCT  60 125
CX034_RS09015 NONE
CX034_RS09020 1866357 .. 1866376 +  -4.2    -3.889   ATACGGGCATCCCGG            GGTATGGCG GCT CGCCG-GCC            TTTGCTATCCTTGCG  57 62
CX034_RS09025 NONE
CX034_RS09030 NONE
CX034_RS09035 NONE
CX034_RS09040 1872768 .. 1872822 + -15.7  -2.71364   GGGGCGGAGAACGAG TAGGCGG-GGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCGTGCCAACCGTCAA TCGTTGACGAAGTCC  75 23
CX034_RS09050 1874421 .. 1874432 +  -7.2  -4.59773   TCTATATCCAGCATG                GCGG CGCT CCGC                 TTTTTCGGGCTCAAG  79 84
CX034_RS09070 NONE
CX034_RS09075 NONE
CX034_RS09080 NONE
CX034_RS09085 1880501 .. 1880517 +    -3  -2.78679   CGGGCGAGGGGGCCT              GAGATG CGCGC CATTTC              CTTTCCGTCCCGGCG  40 24
CX034_RS09090 NONE
        cpaB 1881898 .. 1881912 +  -3.5  -3.01791   GTGCGCGGCGGCGAC               GTGCA GGCAG TGCGC               TATTGACGAACAGCT  44 5
CX034_RS09100 NONE
CX034_RS09105 1884702 .. 1884725 + -12.4  -3.16564   CCGCCATCCATGGAA          TTCGGCGCCG CGGG CGGCGGCGAA           TTCATCGCGTCCGAA  69 58
CX034_RS09115 NONE
CX034_RS09120 NONE
CX034_RS09125 NONE
CX034_RS09135 NONE
CX034_RS09140 1892849 .. 1892885 +  -4.4  -3.04398   CCGAAACGGCCGATG   GCGTGG-CCGATCCG TAACCGGC CGGGTTGGGCCACGG    GTTTTACGAAACCGC  45 9
CX034_RS09145 1893689 .. 1893704 +  -3.2  -3.83318   GTATGGCGGGGCGGG              GCATAG GCGG CTACGC               TTGTATTATTGCCGG  56 74
CX034_RS09150 NONE
CX034_RS09155 1895049 .. 1895075 + -11.5  -3.65351   GGTCCGGCGCCGGTT        CGCCGGCGCCGC GGCC GCGG-GCCGGCA         TTTCCGTCCAGCTCG  75 105
CX034_RS09160 1895661 .. 1895673 +  -2.6  -3.29471   GCTGGGCGAGCCCCC                GGTC CCTTC GGCC                TTCGTATCATGAACG  44 1
CX034_RS09165 1896162 .. 1896181 + -16.4  -3.75629   CCGGGGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG  88 95
CX034_RS09185 1900474 .. 1900486 +  -7.7  -2.71144   GCCCTCCAGGCCCGT                GACGT CGA ACGTC                TCGTTGCCCACGATG  49 311
CX034_RS09200 1906431 .. 1906456 +  -4.7  -3.06696   GCAATGCTCGCCTGG         CGCAGGAC-TGG GGT TCACGTCCTGCA         TGTCTTGAAACGCAA  45 133
CX034_RS09205 1907466 .. 1907500 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 271
CX034_RS09235 NONE
CX034_RS09240 1913631 .. 1913650 +  -9.2  -2.72344   GCGCGCATGAACAGC            GGCCTGGC CTGC GCCACGCC             TGCTTCGAAATCGGC  52 243
CX034_RS09250 1914127 .. 1914145 +  -4.4  -3.66018   GGGTGAACAGGCCAG             CCAGCCGG TGC CCGACTGA             TTCTTCCCATCCTCC  55 7
CX034_RS09255 NONE
CX034_RS09260 1916204 .. 1916250 +  -7.2  -3.55444   ACAAAGGGGAGCCAG GCGGCGG-TC-CGCCTGCCGGT CGGAA ATCGGCGAGCGTGTTCCGTCGC TTTACGGAATCGGAG  58 339
CX034_RS09265 1916962 .. 1916996 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 262
CX034_RS09285 1920827 .. 1920860 + -15.9  -2.70932   GCGCGCGGCCGCGGC     CGACGTGGCCGGCGC CGGC GCGTCCGCCTCGTCG      TCCTTGAAGCGGCGC  75 93
CX034_RS09300 1923438 .. 1923494 +  -7.2  -4.64334   GCAAGGCGCGTGCGG CCCT-GTCCACGCGCGGCGGCCCC-CC GCGCAA GGCGGGGCAGCCGC-CGCCAACCAGGG TTTTGTTGCGGCGTT  79 173
CX034_RS09305 NONE
CX034_RS09310 NONE
CX034_RS09315 1926041 .. 1926079 +  -5.3  -4.07568   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 72
CX034_RS09320 1929304 .. 1929314 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAAATTCAA  61 127
         rrf 1929489 .. 1929523 + -19.5  -4.59773   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGTACGC 100 36
CX034_RS09345 1933419 .. 1933441 +  -4.7  -2.70932   TGAACGGCCGATGCT           GCAGCAGCG GGTGG CGCAGCTCC           TCGTTGGCGCGGCGC  43 296
CX034_RS09390 1941896 .. 1941906 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 180
CX034_RS09395 1942945 .. 1942955 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS09400 1944104 .. 1944143 +  -8.4  -3.60098   AAGCGCCGTGGCAAA  CACAGGAGTCGCCCGCGCG TTG CGCGTGCGCGGC-CATGGG  TTTACGCTAGCGCCT  62 170
CX034_RS09405 1946401 .. 1946414 +  -5.9  -3.82824   GCAGGTCGGCCAGGA               CGGCG TCGA TGCCG                TTCTTGTCGATCGTG  63 408
CX034_RS09430 1950628 .. 1950682 + -11.8  -3.84712   CTATTGACAGTTCAC AGCTAGGATGCCGCCGACCCCGGCGC CAT GCGCCGGGGTCGGCCGTCGCAAATCA TTTCATCTCCAATTG  79 20
CX034_RS09435 1952206 .. 1952218 +  -4.7  -2.71712   GTCGCCGGCCCCGTA                CGCCG GAG CGGCC                CTTTCCCGGGCCGCG  43 145
CX034_RS09440 NONE
CX034_RS09445 1954428 .. 1954447 + -11.4  -4.11692   CGATATGATGGAAGA            CGGTCACC AGTG GGTGGCCG             TTTTCCCAATCGCTC  82 78
CX034_RS09450 1954857 .. 1954872 +    -6  -2.83112   GGCCGCTGAGGCATG              CCGCGG CGAG CGGCGG               TATGATCGATTGCAT  48 32
CX034_RS09455 1956172 .. 1956199 +  -2.5  -3.08679   CTGCGGCGAGGGGGG        GGCGCAGTGGC TACAAT GCCGCGATGCC         TATTCGCTACACCCC  42 87
CX034_RS09460 1957029 .. 1957041 +  -3.3  -3.78793   GGCCGCCGCAAAGCA                GGCTA CCA TCGCC                TTATTCATAATTATG  56 89
CX034_RS09465 1957887 .. 1957914 +    -9  -3.01712   GCCGCCGGCGAAAGC        GCCGGCCTGATC GCCC GGCTGGGCCGGC         TGTTCGAGCGAGACA  57 69
CX034_RS09470 NONE
CX034_RS09475 1960358 .. 1960387 +  -8.5  -2.62983   AGCGCTTCAGGACGG       TGGCGCGCAAGGCC GAC GACCTGGC-CGCCA       TCCTGTACACGTCCG  52 485
CX034_RS09485 1962642 .. 1962665 + -13.8    -4.015   TGAGGGACGAAAGGG          GAGCGGCGCC GGCC GGCGCGGCTC           TTCTTTCATCGCTGG  84 53
CX034_RS09490 1963290 .. 1963309 +  -5.6  -3.32343   GTGAAGTAGGGGTTG            C-GCCGTCC CGC GGCCGGCCG            TTCTAGGGATATCCC  51 32
CX034_RS09495 1964424 .. 1964455 + -20.8  -2.71712   TCAAGTAATCGCGTA      TTCGGCCGGGCGCC GCGC GGCGCCCGGCCGGC       ATTTCCACCGAACAC 100 33
CX034_RS09505 1966443 .. 1966486 + -10.9  -3.14344   GGTTGCGCGCGGACA GGCGCAGGCCG-G-GGCCGGG CAGG CCCAGCAGCACCGCCTGCGCC TTGATCAAGGCGATG  64 257
CX034_RS09515 NONE
CX034_RS09520 NONE
CX034_RS09525 1969651 .. 1969667 +  -2.1  -4.62069   GCGCGCTTTTACCTC              CGTGAGG AAT CCATGCG              TTTTTCGCCTCAGCG  70 266
CX034_RS09530 1970996 .. 1971027 +   -15  -4.26076   GCCAGCAGTCCTAAG      CGGCGCGCGGCGCC CGAC GGCGCCGCGTTCCC       TTTTCGTGAGCATCG  95 27
CX034_RS09535 1974493 .. 1974524 +  -6.5  -3.61398   TGGCGCCGCAGGGCG      C-CACGCCGGCCGA CGAGA TCGGCTGGTGCGAG      TTCTTCCGCGACGCG  56 227
CX034_RS09545 1976530 .. 1976548 + -11.6  -2.56271   GCGGCCACGCCTGAA             GCAGGGCG GGG CGCCCGGC             GTATTATCATCACGA  61 27
CX034_RS09550 NONE
CX034_RS09555 NONE
        uvrC NONE
        pgsA 1980660 .. 1980670 +  -8.2  -3.85698   GTGGCGGGCTGGTTC                 GCGG CCG CCGC                 TTTCTGGAGACCGCG  68 111
        aceA 1984463 .. 1984501 + -13.7  -2.90392   TCAAGGCGGCGTGAT  CGGGC-GGCGCCCGCCCC GCAT GGGGCCGGCGCCAGCAAG   TGTAGTTGCAGGGTG  71 27
CX034_RS09585 NONE
CX034_RS09590 1985925 .. 1985941 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 494
CX034_RS09615 NONE
CX034_RS09620 NONE
CX034_RS09625 NONE
CX034_RS09630 1993037 .. 1993050 +  -2.4  -4.25658   CACGACGGGAACGCC               TCGT ATGACA ACGA                TTATTTTCATCGCCT  62 43
CX034_RS09635 NONE
CX034_RS09640 1994596 .. 1994611 +  -6.1  -3.20382   CGTCGATCGACTCCT              GCGCT TCGGCC AGCGC               TTCGTAGATCTGGAA  50 100
CX034_RS09670 NONE
CX034_RS09675 2004142 .. 2004152 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS09685 2005191 .. 2005201 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS09690 NONE
CX034_RS09695 NONE
CX034_RS09700 2007794 .. 2007812 +  -6.8  -3.28712   ATGCCTAAGCCATAA             GATGTATT ATA GATACATC             TTATAAACCGCAGGA  54 442
CX034_RS09710 NONE
CX034_RS09715 NONE
CX034_RS09720 2009937 .. 2009953 +  -2.1  -3.08046   CCCAAATCTGCGAAA              ATCCGCC GTT GGCCGAA              CTTTTGCAGTGAGAA  42 60
         xth NONE
CX034_RS09730 2012358 .. 2012369 +  -2.2  -2.90571   CCGCTACCAAAACGG                C-CGG AAT CCGTG                TATAGTTGCGGACTT  40 82
CX034_RS09735 2012481 .. 2012508 + -12.8  -5.63517   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC 100 42
CX034_RS09770 2018769 .. 2018796 + -18.4  -2.50443   CAGACGCCTCCCGGC        CAGGCGCGCGCA CGCC TGCGCGCGCCCG         CTTCCTGCCCTCTCC  87 406
CX034_RS09790 2023009 .. 2023027 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 249
CX034_RS09820 2028506 .. 2028516 +  -2.4  -2.71461   AGCAATCGGCATTGC                 CGCC ACG GGCC                 TCGGTTTCCTATTCT  38 101
CX034_RS09825 NONE
CX034_RS09830 NONE
CX034_RS09835 NONE
CX034_RS09840 2033730 .. 2033776 + -17.2  -3.56821   CAGCGGCGCAGGCCC GTCGCCGCC-GGCCGGCGCGG CGTCCC CTTCGCCGGCCTGGCGCCGGC TTTCCAGGATCTCCT  93 418
CX034_RS09855 NONE
CX034_RS09860 NONE
CX034_RS09865 2037320 .. 2037354 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 213
CX034_RS09885 2039754 .. 2039764 +  -2.4  -2.71712   CCGCTTGCCGGGATA                 CTGG GGG CCCG                 CTTTCGCCCGCGAGA  38 75
CX034_RS09890 NONE
CX034_RS09895 2042781 .. 2042812 +  -6.4  -3.23216   CAGACGCGATTGACG      CGCGCC-GCCTCGGG CCC CTGGTGGCCGGTGCG      TTCGTGCTCGTGCGG  50 480
CX034_RS09905 2043979 .. 2044036 + -21.1  -2.83403   GTTTAATAGCAACAT CCTTCGTCCTTCGAACCGCCGCCCGGC CCAT GCCGGGCGGCGGCCCGGGCGATGGCGG CTTTCCTGGCGGCGC 100 102
CX034_RS09910 2044811 .. 2044837 +   -10   -3.5393   CCAACCGCGATCTGG         TGGCCGCCCTGC TCA GTTGAGCGGCCA         TTTGCGCCGGATCAT  67 6
CX034_RS09915 2047059 .. 2047079 +  -5.3  -3.57144   CGATGGGCCCGGGCA            GCAGCCGCT CGA AGCGGATAC            TTTGCGCGTCCAGGC  54 514
CX034_RS09930 2048470 .. 2048521 + -11.6  -3.14931   CGCGCCCGGCTCAGT C-GGCCGGCG-CGCGCCGCACCG-CG GCGT CGACGATGCG-CTCGGCGCCGGCCAG TTGCTGCGCCATCCC  66 41
CX034_RS09940 2049362 .. 2049393 + -24.6  -2.82759   TACGGAAGGATTCGG      CAGGAGCCTGTCCC CGTC GGGACAGGCTCCTG       TGTCATAGGTATCTT 100 121
CX034_RS09950 2051190 .. 2051208 + -10.2  -3.01712   AGGTCGTAGCGCATC             GCCGCCAG GCG CTCGCGGC             TGTTCAGCGGCAGGA  59 358
CX034_RS09960 2053178 .. 2053193 + -10.4  -2.78384   GCCAGCTCGGGGTCG              TCGCGC AGCC GCGCGA               TATAGTCGGCCACCC  56 498
CX034_RS09975 2055744 .. 2055766 + -11.3  -2.70932   TGGCGCTGTAGCTCA           CCAGCAGGC ACTTG GTCTGCTGG           TAATTCGACAGCGCC  59 148
CX034_RS09985 2059518 .. 2059552 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
CX034_RS10030 2067488 .. 2067522 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS10040 2069386 .. 2069413 +  -5.5  -3.66058   CGCCGCGCCCGCCGC        CGC-CGTGGCGC AACCC GCGCCATGAGCA        TTCTCTATCTGCTGT  57 1
        ccoS 2069933 .. 2069956 +  -7.4  -3.28924   TCGTATTACGTGGTG          CAG-CGCACCT GTC AGGCGCGGCTG          TTCTGCGACAAGCTG  56 408
        ccoO NONE
CX034_RS10060 NONE
        ccoP NONE
        ccoG NONE
CX034_RS10075 NONE
CX034_RS10080 2075011 .. 2075028 +  -3.3   -3.6761   GCGGCCAGGACGAGA             CGCCGTT CTGA AGCGCCG              TGTTTGTTGCGACGC  53 15
CX034_RS10085 NONE
CX034_RS10090 NONE
CX034_RS10095 NONE
CX034_RS10100 2078624 .. 2078651 +  -6.2  -3.01712   GGCCCGGATGGTGGC        GGCCGTC-AGCTG CGC CAGCGCGACGCCC        TGTTCGGGCCCGGCG  48 476
CX034_RS10110 NONE
CX034_RS10115 2080403 .. 2080442 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAC CTAG GTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CX034_RS10120 2081809 .. 2081833 +  -4.9  -3.77087   AGAGCCGACTTGTAA          TCGGCCTCG GTGCGTA CGGGGCGGA          TTTCCATGTTCACTC  58 361
CX034_RS10130 2082888 .. 2082905 +  -8.3  -3.67954   GGCGCGGCTGGGGTG             GCGCAGC TTGC GCAGCGC              TTTGGCCTCTATTTG  67 483
CX034_RS10235 2107697 .. 2107715 + -17.4  -3.15544   TCTGAACGCAAGGGC             CCCCCGGC GCG GCCGGGGG             TTCCTGCCCATGGCA  84 36
CX034_RS10250 2110684 .. 2110694 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS10255 2111677 .. 2111716 +  -9.4   -3.5361   CCTGGGCGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CX034_RS10265 NONE
CX034_RS10270 NONE
CX034_RS10275 2114507 .. 2114529 + -11.2  -3.57144   CGACGCGCTGGCCGC           GCTGGCGCGC CGC GCGCCCTAGC           TTTCGCGCTCGCCCG  70 4
CX034_RS10295 2117260 .. 2117279 + -16.4  -3.90112   TCGCGCCAAGACAAA            CGGCCCGC TTGC GCGGGCCG             TTTGCTTGCCGGCAG  93 53
CX034_RS10385 NONE
CX034_RS10390 2138112 .. 2138130 + -17.4  -3.10522   GTACGCCAAAAAAAA             CCCGGGCC AGC GGCCCGGG             TCTGTTGCGTCGCCT  84 135
CX034_RS10445 2149969 .. 2149979 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 86
CX034_RS10450 2151337 .. 2151352 +    -6  -2.50699   CAGGTCGAAATGCTC              GGCGGC AAAC GCCACC               ATATCTTCCTTGAGC  44 379
CX034_RS10510 2161860 .. 2161888 + -19.7  -4.15508   GGCACGGCCGGCATC        GAGAAGCGGAGCC CAT GGCTCCGCTTTTC        TTTTGCGGCTTGCTT 100 45
        lexA 2162669 .. 2162683 + -12.8  -4.74103   CTACGCGGGCTTGCT               GCCCCC CGA GGGGGC               TTTTTGCCTTGGGGC 100 75
CX034_RS10600 2177378 .. 2177402 + -22.9  -4.11692   GATAGCCGAAAAAAA          CCGGGCCCGGA TGA TCCGGGCCCGG          TTTTGCGGGTCGCTG 100 91
CX034_RS10625 2184230 .. 2184255 + -14.7  -5.14563   GGCGCGCAACAAAAA         GCCCCACTGCC GCGA GGCAATGGGGC          TTTTTTCATGCGGCC 100 45
CX034_RS10660 2188759 .. 2188795 +   -21  -4.59773   TTCGCGTGCGCAGTC    GAACTGCCGCCATCCC CACAA GGGATGACGGCAGTTC    TTTTTACGGATGGGG 100 70
        dapD NONE
CX034_RS10680 NONE
CX034_RS10685 2193144 .. 2193154 +  -4.6  -2.64912   GCGAACAATTGAACA                 CGTG ATA CGCG                 CTTCTGGCTTGACCC  42 21
CX034_RS10690 2195119 .. 2195129 +  -2.4  -3.58365   GCGCAGCGTAAAACC                 AGCG AGA CGCA                 TTATCTCCTATACTC  48 74
CX034_RS10695 2198505 .. 2198519 +  -7.1  -3.53012   TGCGGCTTTGCGCCA               GGCTG AGATA CAGCC               TTTCCCGGGCCCGGG  58 488
CX034_RS10710 2202402 .. 2202436 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS10725 NONE
CX034_RS10730 NONE
CX034_RS10735 2209740 .. 2209755 +    -6  -4.08945   CACCACTTTGACAGG              CGGCGC CGCC GCGCCC               TTTTCCCGCCATGCT  66 104
       coaBC 2211140 .. 2211192 +  -9.2  -3.53174   CCTCGATCAGCGAAT GCGACAGCGACAGCCAGGCCAGCGC CAGAAA GCGC-GGCCGGGCT-TC-CAGTTGC TGTTTCTCCGCCTCT  61 191
CX034_RS10750 2212524 .. 2212546 +  -6.8  -2.84298   AGGACGAGCCCGTGG           TCGCCGTGCC CGC GGCGCCGCGC           TAGTTGTGAACTGTC  50 0
CX034_RS10780 2217668 .. 2217684 +  -2.1  -3.61398   AGCAAGGTATGGCCG              GCCAGCC GGC GGATGTC              TTCTTCACCGCGCAA  50 223
        cphA 2223175 .. 2223195 + -15.4  -3.61398   TTCGCCCCTCTTGCC            GCGCCGCC CGAAC GGCGGCGC            TTCTTCGACGACAGG  83 50
        cphA 2225853 .. 2225870 + -14.1  -5.28176   CTCAAATGTAACTTG             GGCCGGC GCAA GCCGGCC              TTTTTTCTCCCTGCG 100 84
CX034_RS10805 NONE
CX034_RS10810 NONE
CX034_RS10815 2226897 .. 2226918 + -15.9  -5.86965   CGCCGTACGTGTACC           GCCTTCGGG TTCG CCCGAAGGC            TTTTTTTTGGTGCCT 100 73
CX034_RS10845 2230431 .. 2230449 +  -5.9  -3.16564   GCTGGCTCAGCCTGC             GGCCGAC TGAGC GTCGCCC             TTGATGGCCTCGGCG  51 16
CX034_RS10855 2233354 .. 2233380 +  -5.1   -2.8352   CGAGCTGGCCACCAT        CCGGC-CCGCCGT CTG ACG-CGGAGCCGC        CTTGTTCAGTTACCG  46 10
        rlmJ 2234627 .. 2234669 +  -8.8  -3.28924   CACCACGCCCAGCGC CGCCCGGCGCAGGCCCGGCG CGA CGTCCGGATAGCGCGCGGCG TTCTCGCCGGCGATG  59 407
        cueR 2237486 .. 2237508 +  -8.3  -3.29144   CGGCCGCCTCGGCAA           GGCGCTCGG CCTCC TCGCGCGCC           TTCTGCCGCGCCTGG  58 72
        plsY 2244837 .. 2244865 +  -2.9  -3.86015   CCACCGCGCGCCGAT        GACCGCGAGTTGG TGC CCAAAGCGAGGAC        TTTGTGGGACAGATA  56 162
CX034_RS10925 2246361 .. 2246388 +  -9.8  -2.52464   GGCGCGGATGGCCTT        GGCCGCCAGC ACCTCGAC GATGGCGGCC         TGCGTTGCCGCCGCC  55 402
CX034_RS10935 2248573 .. 2248603 + -18.3  -3.58343   CGCGCGCCTCGCCCC       GCAAGCAGGCCGC CTCGC GCGGCCTGCCTGC       TTTCGAGGTCGTCAA  90 49
CX034_RS10945 2250413 .. 2250428 +  -4.6  -3.64703   AATTCCAGTTGCGCG              CCGTCG GCGT CGAAGG               TTTCGCTGCGCACGC  54 146
CX034_RS10970 NONE
CX034_RS10975 NONE
CX034_RS10980 NONE
CX034_RS10985 2259546 .. 2259556 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS10990 2260737 .. 2260751 +  -8.5  -3.35813   TGCCTGGAATAAGGG               GCCGC TCGGC GCGGC               TTCGTTAACCTCGAC  59 202
CX034_RS11015 2266165 .. 2266178 +  -8.1  -3.06261   CGACCTGCGCCGCCA               GCTCG GCTT CGAGC                TGTTCCGCGTTCGCG  52 279
CX034_RS11025 NONE
         alr NONE
CX034_RS11040 NONE
CX034_RS11045 2273938 .. 2273953 +    -6  -3.53811   CGCAGCATGCGGTCC              GCGGCG GTCT CGCCGG               TTTCCACCACGTAAC  56 158
CX034_RS11060 2276079 .. 2276112 +  -2.3  -3.60792   GTAGTCCCCATACGT     CGCGTCGTAAGTTTT ACGG AAGACGTTCAGCGCG      TTGTATCTGAATGCT  48 37
CX034_RS11065 2277267 .. 2277277 +  -2.4  -4.07568   CACCACCGCCAGCGT                 GCTG ATG CTGC                 TTTTCCGAACCCGGG  58 448
CX034_RS11175 NONE
        sycN NONE
CX034_RS11185 NONE
CX034_RS11190 NONE
CX034_RS11195 NONE
CX034_RS11200 NONE
CX034_RS11205 NONE
CX034_RS11210 2298879 .. 2298900 + -12.9  -3.01712   TCGCCGCCGACCTAG           ACGCCGCGC GTCA GCGCGGCGA            TATTCGGGGCCGAGG  70 65
CX034_RS11220 2301110 .. 2301122 +  -4.1  -3.55444   AGGCGGTCGCCCGAG                TCGAG GTC TTCGA                TTTCCACGGTCGCGC  51 511
CX034_RS11230 2304161 .. 2304201 +  -3.2  -3.28712   CGTAGCGGTCCAGGT CCT-GTCCG-GTCATGGCGG CGA CCGCCTTCACGTGGCCCAGG TTCTCGGCCACCAGG  47 523
CX034_RS11240 2305448 .. 2305472 + -11.4  -3.14344   TGGCGCAGCGGCTGG         CGGCGCG-CTG AAGC CGGCCGCGCCG          TTGATGGCGCGCATC  66 15
CX034_RS11245 2307047 .. 2307081 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS11280 NONE
CX034_RS11285 2315167 .. 2315183 + -15.1  -3.05384   GGCTGCGCCGAGACG              GCCGGCG TGG CGCCGGC              TTCGGTCGGCAGGCC  74 475
        htpX 2317551 .. 2317570 + -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 52
CX034_RS11315 NONE
CX034_RS11320 NONE
CX034_RS11330 NONE
CX034_RS11335 2325790 .. 2325845 +  -5.5  -2.82623   GGTTGGACGCCACCA CCACATCGAACCAGTCCGGGTGCTGCAC GAA GTGC-GCGCACAGGATG-T-CGATGTGG TACTTGTCCCAGCGC  44 400
CX034_RS11350 NONE
CX034_RS11355 NONE
CX034_RS11360 NONE
CX034_RS11365 2333912 .. 2333946 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        gabT NONE
CX034_RS11380 NONE
CX034_RS11385 NONE
CX034_RS11390 NONE
CX034_RS11395 NONE
CX034_RS11400 2341254 .. 2341310 +  -3.7  -3.53012   GGCGCGTCACCATGC CGGTGAC-CGGCTCGCCGCGCAGGA AGGCGCGGA TCTTG-GCCGCCAGCTGCGCCACCG TTTCGCGGCGCAGGC  49 65
CX034_RS11410 2344137 .. 2344153 +  -2.1  -3.17051   TATCATGCCTATCAG              GCCCGAT TGC ACCGCGC              TGTTGCTGGTGCCGG  43 498
CX034_RS11425 2347527 .. 2347545 + -17.4  -3.55622   AGCGCAATAACCGTC             CGGGCGGC CAT GCCGCCCG             TTTCCCGGCCTTGCC  89 31
        purD NONE
CX034_RS11435 NONE
        nadD 2350475 .. 2350487 + -10.5  -3.93489   TCCGCCACATCGACA                CCCGC GCC GCGGG                TTATATTTATCGTTA  77 60
        rsfS NONE
        rlmH NONE
CX034_RS11455 2352452 .. 2352482 +  -7.5  -2.73364   GATACGGCGCCCGCC      GCGCAGCAACGCGC CCAG GC-CGTGGCTGCGG       TGCTTGGCATCGACC  49 472
CX034_RS11490 NONE
CX034_RS11495 NONE
CX034_RS11500 2363719 .. 2363738 +  -7.8  -3.67597   ATCTAGCGCATCGGG            CCCGGCATG CAG CG-GCCGGG            TTCTTCAATAGCGCC  63 35
CX034_RS11515 2367043 .. 2367063 + -15.4  -2.57132   CAGGCGCTGGCGCTG            GCCGCCCG ACAGG CGGGCGGC            ATTCTGGCCCACCGG  69 298
CX034_RS11525 NONE
CX034_RS11530 NONE
CX034_RS11535 2370708 .. 2370746 + -19.7  -3.01712   AGCTGACATCCGCGG  C-GAGGTGTGCCTGTCCC CACT GGGACAGGCACACCGCAG   TGTTGACGGGCGCCG 100 84
CX034_RS11550 2375045 .. 2375084 +    -2  -3.44527   CTCGCGTAGCGGCGC GGGCAGGCT-GCCCGCGG CAGCCA CCA-GGTCGAGCCAGCCC  TTGTCGTAATCGGTG  47 463
        lpxO 2382924 .. 2382959 + -20.4  -2.53015   TGGCACTCTAACCAC    CCGGGTGCCTGTCCCC GCGG GGGGACTGGCACCCGC     TGACTTGGCGCCTGT  95 30
CX034_RS11590 2388464 .. 2388518 + -13.5  -3.04322   TGGTTTTCATCAAGA AGCTGTAACCAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTAAA-ATGGCC TGTTCGCAACTTACC  70 18
CX034_RS11595 2388845 .. 2388860 + -11.8  -4.90266   TTCGCCTCATCGCAA              CCGGCC GGCA GGCCGG               TTTTTCATTGATGCC 100 53
CX034_RS11600 2390848 .. 2390870 + -12.6  -3.61715   TCTCGATGGCTTCTT           CGCCGCGCGC CAG GCGCTCGGTG           TTCTTGACCCCGGTG  74 122
CX034_RS11625 2396826 .. 2396880 +  -7.2  -3.39327   ATTGAGCGAATCGCC GCCGCGCGCGTAGTACATGTAGAC CACGCCCCC GTC--CATGAACAACGCGCGCCGC TTGTGGGTGTAGCCG  55 480
CX034_RS11675 NONE
CX034_RS11680 2406934 .. 2406944 +  -3.2  -2.63631   TCCCTTCGAGCAACC                 TGGG CTA TCCA                 TCATGTCGCAGTTGA  39 53
CX034_RS11685 2408259 .. 2408269 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS11690 2409293 .. 2409328 + -14.7  -2.70932   TCTAGTGCATCTCAG   CGCGGCGG-GCAGGCGG CCCG CCGCG-GCGCCGCCGCG    TCGTTCCCGCCCACC  72 45
CX034_RS11735 2417614 .. 2417635 + -14.4  -4.07885   CCGGCATTGCCGCCA           CGGGCCCG CGCAGA CGGGCCCG            TTTTGCAGGACCGTC  85 42
CX034_RS11745 NONE
        acnD NONE
        prpF NONE
CX034_RS11760 NONE
CX034_RS11765 2425944 .. 2425957 +  -3.9  -3.53012   TCACGCTGGTTGTCG               TCAAA CCCT TTTGA                TTTCCGCGCCAGCGA  51 12
CX034_RS11770 2427392 .. 2427403 +  -7.2  -3.28712   AAGCGCCGGCCCGCG                CGCC ACGC GGCG                 TTGTAAAAGCGCCGC  54 39
CX034_RS11775 2427845 .. 2427863 +  -7.4  -5.75342   AAGCCCCTTTTAAGA             CCCGCT CTAAACC AGCGGG             TTTTTTTTGGCCGGG 100 96
CX034_RS11785 2429388 .. 2429408 +  -8.3  -3.09492   AATAACCCTTATACG            TCCCCGT TAGGGAT ACGGGGA            TGTTGCAGTTCACGG  56 39
CX034_RS11790 NONE
CX034_RS11795 NONE
        hslO NONE
CX034_RS11805 2433926 .. 2433942 +  -7.9  -2.84325   ACAGGCCGGACTTGT              CCACGCC GAA GGCCTGG              TCGTATTTGCCGGGC  52 449
CX034_RS11825 2437416 .. 2437449 + -27.5  -3.16742   CGGAAGACAGCGGTT     TCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGA      TTACTGACCATTAAC 100 487
CX034_RS11920 2457844 .. 2457890 + -16.5  -5.00884   CGGCATGTAAGCGCG GGCGCGCACGTGGGCGCC-GGCA GGA TACCAGGCGCCCTCGCG-GCGCC TTTTTTCCAGACCGT 100 31
CX034_RS11925 NONE
CX034_RS11930 NONE
CX034_RS11935 2460572 .. 2460590 +  -8.8  -3.45849   GATGCCGTCCAGGCC             CGCGGC CAGCCGC GCCGCG             TTGTCGTGGTCTAGC  61 273
CX034_RS11970 2469164 .. 2469181 + -14.1  -4.41494   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 61
CX034_RS11980 2470833 .. 2470862 +  -8.5  -3.05596   GACAGTTCACAACTA       GCCGTTCA-GGCCG GCC CGGCCCTGCACCGC       TTCGCTGACCACCTG  55 25
CX034_RS12000 NONE
CX034_RS12010 NONE
CX034_RS12015 2478860 .. 2478887 + -18.4  -2.71924   CATGACCTGAGCCGC        GCGGGCGAGGCC TGAC GGACTCGCCCGC         CTTTCCGGGAGGCTG  87 11
CX034_RS12020 2479223 .. 2479242 +  -2.7  -3.63266   ATGCGCAACGTACGG            CCCGGCT GAACAG GGCCCGG             TTTCCGATGGATTTT  53 17
CX034_RS12025 2480065 .. 2480083 + -14.6  -5.78622   CTGCGCAGCGAAAAA             GGCTTGCC AAC GGCAAGCC             TTTTTTTTCGCCTCC 100 50
CX034_RS12030 2481174 .. 2481196 +  -5.5  -3.83026   AGGCGGCCAACCCAT          GACCCGCACC AGCC GG-GCGGATC           TTTCATGTGCCGCGG  60 24
CX034_RS12035 2482287 .. 2482297 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 171
CX034_RS12045 2484497 .. 2484544 +  -7.4  -3.64822   GGTTGGCGATGCCCA CGCCGTGGCCGGCCAGCGCCAG TTGG CAGACGGTGGACGAATACGGCG TTTCGATGGCGGCGT  60 228
         maf NONE
CX034_RS12150 NONE
CX034_RS12155 2503466 .. 2503511 + -13.1  -2.71712   TGACGGAGAAGCACC AGGCCG-CGCGCGACATGGTGC TGC GCGCCCTGCCGCGCGGCGGCGG CTTTCGCGAAGACGA  67 217
CX034_RS12250 2523916 .. 2523972 + -11.5  -3.65812   AGGTCCGGCGCACGC GCCCGGCCTG-AG-GCGGCCGG-ACGCC GCGC GGCTTGCCGCCCGGGCTACTGGCCGGGC TTCTGTTCGGCAGCC  75 15
        mobA NONE
CX034_RS12315 NONE
        mobB 2537549 .. 2537561 +  -3.3  -4.36914   GGCGGCGCATTGCCG                TCGGC CGC GCCCA                TTTTCTGCCACAGCG  67 162
CX034_RS12350 NONE
CX034_RS12355 NONE
CX034_RS12360 NONE
CX034_RS12365 2546787 .. 2546811 + -11.3  -3.57792   ACCACCCGCACGCCG          GCCTGCGCCAG CTC CAGCCGCAGGC          TTTCGCAATACGTCG  70 398
         tal 2553067 .. 2553077 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS12395 2554116 .. 2554126 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS12400 2555400 .. 2555413 +  -4.5  -3.28924   CCAGCGCCGCCTGCA               CCG-GC TGG GCGCGG               TTGTGCACCGAGATG  49 295
        smpB 2562193 .. 2562206 +  -5.9  -2.71364   CGCGATTCCTGATGC               GGTCG CGGC CGGCC                TGCTTGGCCGCGTAC  47 29
CX034_RS12460 2565620 .. 2565641 +  -8.6  -4.56597   GTTGACGTCGGCGTT           GCGCGCGG CGTTGA CCTCGCGC            TTTTTCAGCACGCCG  83 258
CX034_RS12470 2566717 .. 2566737 +   -14  -4.77036   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 52
CX034_RS12480 2570376 .. 2570386 +  -2.4  -3.16492   GCGGCAGCACTGCCT                 CCAG GTC CAGG                 TGTTCGTGGATATGC  43 291
         map 2587264 .. 2587281 +  -5.5  -2.87132   GGCCTTCGTGACACG             GCCGG TCGAAATC CCGGC              TCTCTGACCCCCGCC  46 1
CX034_RS12570 2590310 .. 2590325 +  -7.5  -3.30124   GTTCACGCCCGAGAT              GGCGC AGGCGC GCGCC               TTCTACCCGCTCACC  56 420
CX034_RS12580 2591189 .. 2591245 + -31.9  -2.71364   GGCGTTGCGGCGCAA CGCCTGA-CGGC-C-GCGCGGCCGGCTT GCGC AAGCCGGCCGCGCCGCGCCGGTCAGGCG TCGTTGGCCGCGTAG 100 19
CX034_RS12605 2596216 .. 2596228 +  -3.3  -4.57569   CCTTTACCCGGCCAA                TAGGC GGC GCCAA                TTTTTGACAGAATCG  71 117
CX034_RS12610 NONE
        fliS 2598063 .. 2598088 +  -3.1  -4.82901   CACCCTGCGCCTGCC         GTTCCGGCCTG AAAC CAGGAAGGCAC          TTTTTGTCCAGCCGC  75 14
CX034_RS12620 NONE
CX034_RS12625 NONE
CX034_RS12630 NONE
CX034_RS12635 NONE
CX034_RS12640 2600723 .. 2600772 + -11.4  -3.53444   CGGCCCAGGCGCCAG TTCG-GCCTCGGTG-GCGCCGCCGC TTT GCG-CGGCGCGCACCACGGCGCGCA TTTGCGACAGCATGC  69 276
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 2606537 .. 2606588 +  -4.4  -3.30441   CGCCCTGACGCCTGC GCCGGG-TCC-GGCCGCGCAAGGCGGC CCG GCCGCC--GC-CGGCAAGGGTCCCAGC TTCTCGCAAGTGCTG  49 96
CX034_RS12680 2608901 .. 2608918 + -10.5  -2.52464   TTTCGCCCTGTTTTT             CGCCTGC CAGC GCGGGCG              TGAATTGCGGCAGAA  56 308
        fliL NONE
        fliM NONE
        fliN 2611059 .. 2611073 +  -5.6  -3.14564   ACCGCTTGAACAGTC               GCCGCT AAA AGCCGC               TTCATGACCGAATCC  49 18
        fliO NONE
CX034_RS12710 NONE
CX034_RS12715 2612515 .. 2612530 +  -5.4  -2.78712   TGTCCTGAACGCGCC              TGGCCGC GCC GCG-CCA              TGATTGCGTTCACCA  45 33
        fliR 2613446 .. 2613464 + -17.4   -5.1971   CACCAGTTTTCTCAT             GGCCGCGC CCA GCGCGGCC             TTTTTGCTTTTTCCT 100 153
        flgA 2631715 .. 2631730 +  -5.4  -2.79004   CCCCCATCGGGCCGG              TC-CCGC GCA GCGGAGA              ATATTTTGAAGATCC  45 131
        flgM NONE
CX034_RS12810 2632592 .. 2632608 +  -9.3  -3.01712   CATCAAGGCCGCGGG              CGCCAGC CGC GCGGGCG              TCTTGCGCGCGCCCG  57 91
CX034_RS12830 2639585 .. 2639639 +  -7.7  -5.35365   CTGGGGCGCTGGCAA GTAGAAGTCAGCGGGAGCCAGTCCCC GTTC GGGGACAGGCTCCCGG-GTATATTGC TTTTTCTTATGTTTT 100 102
CX034_RS12835 NONE
CX034_RS12840 NONE
CX034_RS12845 2642092 .. 2642102 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS12850 2643230 .. 2643261 +  -5.7  -3.30214   CCGGGGCCTGGATGC      CGGCGCGGGCCGCC TGCCT GG-GGATGGCGCCG      TTGATGTAGTCGATT  52 149
        leuD NONE
CX034_RS12880 2649929 .. 2649939 +  -8.2  -2.57132   AGCGCCACCAGCGCC                 GGCG CCG CGCC                 CTTGTAGGCCACCGC  51 446
CX034_RS12910 2656912 .. 2656922 +  -2.4  -3.68351   GCCGATATTGAGGAT                 GGCC AGC GGCG                 TTTCGATCATGGCCC  53 513
CX034_RS12925 NONE
CX034_RS12930 2662651 .. 2662683 +  -5.4   -3.4072   GCCGCGTACTCGCCC     TGCAGCCGGGCGCCC AGGC GGGCGGTCAGC-GCG      TTGTCGTCGCGGATG  52 281
CX034_RS12955 NONE
        clsB 2668957 .. 2669003 +  -9.8  -3.19602   ACACCGCCGGCGCCG CCTGGGCGCCTGGCTGGCCGGC ATC GTCGGCCTGGCCGTCGTCGGGG TATTGCTGTACCAGG  62 60
CX034_RS12980 NONE
CX034_RS12985 NONE
CX034_RS12990 2673155 .. 2673177 +  -8.3  -2.87132   CGCCGCTCGTGAGCC           CCGCGGCGC CCGCC GCGCTGCGC           TATGTGGACGACAGC  54 29
        treS NONE
        glgB NONE
        glgX NONE
        treZ 2686542 .. 2686593 + -10.5  -3.04144   ACCGCCGACACCCTG GCGCGCTGGCGCGCCCGGCCTCC CGCCAT GCTGACCGCGCGCGCCGGCGGGA TGTTGCGCGTGCCCG  60 188
        treY 2690433 .. 2690472 + -15.6  -3.14132   AATGATGCGCAGGGC  CGGCCGCAGCGCCCGCGCG GCC TGCGCCAGCGC-GTGGCCG  TTCATGCCGGGCAGC  78 169
        ptsJ 2696439 .. 2696455 +  -4.3  -3.09908   ACATCAACCAGGCGA              CTTCCCA TAA TGGGGCG              GTTATTTTCCGAACG  47 55
CX034_RS13055 2697115 .. 2697125 +  -5.4  -3.03798   CTGCCCATCGGCCGG                 GTGA GCC TCAC                 ATTCTTTCTCGCCCT  47 186
CX034_RS13060 NONE
CX034_RS13065 NONE
CX034_RS13070 2699335 .. 2699356 +  -9.4  -3.01712   CCGCACCGCCGCCTG           GGCCGCGCC ATGGC GGC-CGGCC           TGTTCCACCGACAGG  57 396
CX034_RS13085 2700957 .. 2700979 + -20.6  -5.41746   GCCGCGCCGCGATCG           CAGGGCCGCC TCG GGCGGCCCTG           TTTTTTTGGACGCTT 100 51
CX034_RS13090 2701792 .. 2701814 + -10.5  -3.34398   GTGACCGCGCCCAAT           TCGACGGCG GCGCG CGCCGGCGA           TGTTTCCGCGCCGCG  63 273
CX034_RS13095 NONE
CX034_RS13100 2703297 .. 2703319 +  -3.3  -3.24747   GGCATCGGCCCGCCT           CGCCGGG CCCTGCCCA CCCGGAG           TTCATCATGTCACGC  46 89
CX034_RS13105 2704243 .. 2704293 +  -5.6  -3.42996   ATGGTGGGCTCGATG CCCGCGTCGCGCAGCAT-TTGCAGCA CGT TGC-GCGACGTGCTGCA--ACGCGGG TTGTGGTAGATGGTG  52 403
CX034_RS13130 2709130 .. 2709143 +  -2.3  -2.62184   TCCGGGCGCGCGTCC               GCTCG ACCT CAAGC                TGGTCTGACGCGCAC  38 4
CX034_RS13135 NONE
CX034_RS13140 NONE
CX034_RS13145 NONE
CX034_RS13150 2711291 .. 2711303 +  -2.6  -2.78384   GCGGTGGCCGTGGTC                GTGC AGAGG GCGC                TGTCATGAACCGCAC  38 5
CX034_RS13155 2712060 .. 2712076 +  -4.4  -3.10641   AAAATTCTCCAGCCC             CGAGTGG ACCG CC-CTCG              TTCCCTGATGCCTTC  47 1
CX034_RS13160 2712956 .. 2712994 + -10.4  -3.53012   GCGCCGGCGGCGGGC  GCCGCCGAACAACGCGGC GCAAG GCC-CGTTGTTCG-CGCC  TTTGCCGCGCGCCGG  67 41
CX034_RS13165 2713593 .. 2713605 +  -4.7  -3.02739   TGTCGCCACGGACGC                CGCGC GCG GCCCG                TCTGTATCCGTTCCC  45 82
         psd 2714587 .. 2714643 +  -2.2  -2.74192   TTCGCTTTATCGATA CATGAGGGCTTGCTAGATTGCGGC CTGGCCATC GCCGCCGTTTCTGGAGCTCTCATG TCGTCTTCCGCACTG  38 56
CX034_RS13175 2716221 .. 2716253 +  -5.6  -4.31837   CGGGTCGTTGGGCAC     GGCGATG--GTCGCGC CCT GCGGGATGGCATCGCC     TTTCTTCAGTTTCTT  69 461
CX034_RS13195 2718461 .. 2718518 + -12.5   -3.3514   GCCATGCCCGTCGTG CTGGCGCTGACCGCGT-CGCTGGGCGGG CAG CGCGCCCTGCGCACGCAGTATCCGCTAG TTGTGAACTGTCAAT  73 193
CX034_RS13215 2721808 .. 2721841 +  -4.5  -3.84451   TTGCCGCAGCGGCCA     TGGACGAGTTGCTCGG AGC CC-AGTGTCTCGACCA     TTTCGATTTCGGCGG  60 296
CX034_RS13240 2727052 .. 2727072 +  -5.3  -2.53263   CGCCGGTCGCGCGAG            CTGGCCGAG GAG TTCGGCCGA            TGAGTTCGGCGTCGC  44 2
CX034_RS13245 2727731 .. 2727741 +  -3.2  -3.53811   CAATTCACGGCGTCA                 TGTG TCA CGCA                 TTTCGACGGGGTCCC  49 103
CX034_RS13250 NONE
CX034_RS13255 NONE
CX034_RS13260 2730135 .. 2730171 +   -13  -2.71791   TCAACGTACGCCCAG    GTTTCCGGCTCCGG GTCGCACTA CCGGAGCCGGAGCC    ATTTGGAGCACGAGT  67 72
        livH NONE
        livM NONE
CX034_RS13275 NONE
CX034_RS13280 2734063 .. 2734073 +  -8.2  -3.60098   AGCACCACGGCATCG                 GCGC CGC GCGC                 TTTCAGGTGGGCGAT  63 267
CX034_RS13295 2736190 .. 2736228 +  -4.4  -3.53012   CGGCGCTGCACACCA   GTTGGCCTGCCACGATGT AGA ACATCGTGGTCAGCATGC   TTTCGCCGCGGCCGA  52 338
CX034_RS13305 NONE
        trxA 2744372 .. 2744413 +  -2.1  -4.06864   CCGCGCATTCCCCCC TGATTCCCGC-GCGGGCC CGTCCGT GGCCCGCCGCCCGAACCC TTCTTCTTATCTCCC  58 66
         rho 2745729 .. 2745746 + -14.1  -4.54727   CACGCCCGTCCCGAC             CCCCGGC CCGC GCCGGGG              TTTTGCTTTGCGGGC 100 54
CX034_RS13345 2752321 .. 2752333 +  -4.7  -4.09243   TAACGGTTTTTCCCC                GCTGC AAA GCCGC                TTTTCACGCCATGTC  62 38
CX034_RS13350 2753169 .. 2753181 +  -6.2  -4.11501   ATATTCACCGCCAAC                CCGC CGCGC GCGG                TTTCCTTGTATTTGG  69 191
CX034_RS13360 2756517 .. 2756556 + -11.5  -3.05384   GATACACCACGATGC GCGATGCCTG-GGC-GGGCG CGC CGCCCTGCTGCAGGCG-CGC TTCCATGGCCCGCAC  62 181
CX034_RS13380 2761689 .. 2761722 +  -5.2  -3.14963   CACGGCGCCGGCCAG     GCCCTAGACTGCCA CGCAAT TCGCAGTCCAGCGC      TTCACTCGTTATGCC  49 133
CX034_RS13385 NONE
CX034_RS13390 2762926 .. 2762936 +  -4.6  -4.07568   GAGGCGGCCGGCACG                 TGCG TTA CGCG                 TTTTCGCGCGAAGCG  62 92
CX034_RS13435 2774521 .. 2774544 + -11.7   -4.8622   CAAATCGTTGATCAA          GGCCTGGCA CATCGC TGCCGGGCC           TTTTTCATTGGCGCG 100 39
CX034_RS13445 2777177 .. 2777193 +  -5.7  -2.64472   TGATGCGCAGGATGC              CGCGGTC ATA GGCCGCC              TGGATTTCCGACATC  45 268
CX034_RS13455 2778794 .. 2778804 +  -5.4  -5.69473   TGCACGTCCCCCATT                 TCTC ATC GAGA                 TTTTTTTCTGATATC 100 300
CX034_RS13465 2778968 .. 2778989 + -17.3   -4.8622   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 34
CX034_RS13485 2781921 .. 2781935 +  -4.2  -2.73124   CCGGGCAGTTCGTTA               GACTAG GAG CCAGTC               ATTTCAACCCTAAAC  41 71
        kynB NONE
        kynA 2783600 .. 2783636 +  -3.5  -3.40403   CGTGCGCCGGGCTGC    TTGCCCGGCCTGGCTGG CGA CCCGCTAACCTGGGAAA    TTATCATGAAAGAAG  49 152
CX034_RS13500 2783941 .. 2783956 + -10.4  -5.86061   GAGGCGCACCAGAAA              GCAGCC TGCG GGCTGC               TTTTTTTTCCTCGCG 100 58
CX034_RS13505 NONE
CX034_RS13510 2787285 .. 2787302 +  -6.9   -3.9777   GTGGGCACCGTGATG             CGCGCCG CTCT TGGCGTG              TTTCTCGCTCTTGGC  66 147
CX034_RS13530 2791602 .. 2791618 +  -9.3  -2.73364   TGGCCGCCAGCCTGG              GCACGCC GGC GGCGCGC              TGATTACGGTGACGG  55 6
CX034_RS13535 2792443 .. 2792477 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS13545 2794287 .. 2794319 +   -17  -3.01791   ACTCGGCCAGTTCCA     GCGCCCAGGTGCGGG TGCA CCCG-ACCAGGGCGC      TCTTGGCGGCCGAAT  82 290
        hpnC NONE
        hpnD NONE
CX034_RS13570 2799608 .. 2799620 +  -4.7  -2.93073   GAAGACTCCTCAGGC                CGGCG TCG CGACG                TGGTTCTTGAGCCGG  44 450
CX034_RS13595 2802734 .. 2802744 +  -3.2  -3.45366   TCATCCCGGTCGTGC                 TGGC ACT GCTA                 TTCATTCATTGACCG  48 3
CX034_RS13600 NONE
CX034_RS13605 NONE
CX034_RS13610 NONE
CX034_RS13615 2806683 .. 2806711 +  -6.6  -3.28712   CCGTGGCCGGATCGC       GCACGGCCTGGGC GAAC GCCTGGGCCA-GC        TTGTCGCGCACCGCG  52 184
CX034_RS13630 2810530 .. 2810542 +  -4.7  -2.72344   ATGGACAATCTCCCC                GGCCG CAG CCGCC                TGCTTGCACATCCCG  43 499
CX034_RS13650 2813711 .. 2813735 + -13.6  -3.30771   CCCTACGGCCAGTTC         GGTGCGGC-CG CCAT CGAGCCGCACC          TTGTGCCGGATGTCG  74 251
CX034_RS13680 NONE
CX034_RS13685 2824256 .. 2824287 +  -2.7  -3.14931   CGAACCGCCAGCCCT      GCGGGCGGACCTC TACCTC GTGGCCCGCCGGA       TTCATGCGGGCTGCC  43 364
CX034_RS13720 2827711 .. 2827734 +   -16  -3.21416   TGCCGCCTCGGGATG          GCGC-GCGCGC CAG GCGCGCAGCGC          TTCCTGGTAGCGCTC  80 66
CX034_RS13740 NONE
CX034_RS13745 2831320 .. 2831347 +   -14  -4.56597   CTGAGCGCAACCCGA        TCGGCGGCGGGC CCGC GCCCGCCGCGGC         TTTTTCGACAACCAA 100 37
CX034_RS13750 2832231 .. 2832270 + -11.5   -2.9162   CCTTGGCGCGCCATC CTGCCGCGGCGTGCGCC CCCACCAA GGCGC-CGCCGTG-CAG  TCGTTTCCGGAGTTC  63 69
CX034_RS13755 NONE
CX034_RS13760 NONE
CX034_RS13765 2834459 .. 2834491 +  -5.3   -2.9296   CCGCGGCGCCATGAA      CCGGCGCATGGCGGC GGC GCCGTGGGGCGATGG      TATGGTTGGGCTTTC  46 65
CX034_RS13770 2835742 .. 2835789 + -14.1  -3.61517   GCACCGCGGCCGCCT TGCGC-GGCC-ATGGCGCGCGCG CCCG CGCGTGCGCCGGCGGCCCGTGCG TTATTCGACACAGGT  78 300
CX034_RS13775 2836704 .. 2836718 +    -7  -2.85668   GGATGCCTTGGCAAC               GAGCCG GCG CGGCGC               TATGGTATGCGGATA  50 53
CX034_RS13790 NONE
CX034_RS13795 2839978 .. 2839998 + -10.3   -3.6502   TGCTAGACTTTTCCG            TGGGCGGCG ATC CGCCGCCGG            TTTCCCTAGGAGGTG  70 70
CX034_RS13800 2840507 .. 2840530 +  -7.4  -3.06302   GGCCCACGGCCGGGC          TGCCGCGTTGC GCC GCGG-GCGGCA          TTCCCTGCAGGTCCT  52 162
CX034_RS13830 2846571 .. 2846593 +  -6.8  -3.29144   CGATGCGTTCGCCTT           CGGCCGCGTC GAG GGCCAGGCCG           TTGTAGCGGCGGTCG  52 305
CX034_RS13840 2848585 .. 2848603 + -10.2  -3.44051   GGGGGCCGCAGGCTT             GGCGCCCA TCA TGCGCGCC             TTCTCGTAGTGGAAC  65 297
CX034_RS13870 NONE
CX034_RS13875 NONE
CX034_RS13880 2857090 .. 2857139 +  -8.4   -3.9392   GCTGCGCCTGTACGG CGGGAC-GC-GCGCCGC-CGGGCGC TGA GCGCCAGCGCGGCGCGGCAGGCGGG TTGTTTACACTGGAG  70 1
CX034_RS13885 2857798 .. 2857832 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
        bamD 2868827 .. 2868855 + -21.1  -4.08064   ACTCGCGCAGTCCAA        GGAAAGCCCGGCC CCA GGCCGGGTTTTCC        TTTTGCGCGGCCGTT 100 45
CX034_RS13955 2873491 .. 2873527 + -27.4  -2.71364   AAGCGCTGATCGCAA   CGCAGGCGCCGC-CCCG TCAT CGGGTGCGGCGCCTGCG    TCGTTGCCCCGATCC 100 32
CX034_RS13980 NONE
CX034_RS13985 2878225 .. 2878235 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 91
CX034_RS13990 2879725 .. 2879743 +  -8.9  -3.28924   GGTATCGATCTGGCC             GGAAAGC AGCGC GCTTTCC             TTGTCGGCCACCGTG  59 511
CX034_RS14000 2881335 .. 2881352 +  -2.5  -3.58343   ACACGACCGAGCCGG             CCAGCGC CTGG GCGCGGA              TTTCGCGATGCTCGA  50 376
        mdeB 2893696 .. 2893733 + -20.6  -3.06796   CCTGGCAGTCGTGAC   GGCCGCATCGGCCGGG ACGTGG CCCGGCCGATGCCGTC    TTCGCTGCGGTGCAG 100 27
CX034_RS14040 2896278 .. 2896295 +    -4  -3.04144   GGCTCCATAACTCTT             CTGGCG CCAAGA CGCCCG              TGTTACCCATGCAAA  44 172
CX034_RS14045 2896962 .. 2896972 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS14055 2898314 .. 2898344 +  -6.8  -3.65046   GCGCTTGGTCAGGAA      GCGCATGCGCCGG TCGATT TC-GCGCAGGCGC       TTCTTGCCGTACAGG  57 363
CX034_RS14115 NONE
        recJ 2917897 .. 2917908 +  -7.2  -3.65812   GAGCACGCCGCCTGA                GGGC CGCC GCCC                 TTCTGTTACAAACCG  61 26
CX034_RS14125 NONE
CX034_RS14130 NONE
        lysS NONE
CX034_RS14140 NONE
CX034_RS14185 2933200 .. 2933218 +    -8  -3.53012   GCCAGCATCTGCCGC             GTGACGGC ATC GCCGCCGC             TTTGCAGCAAGGAGG  58 170
CX034_RS14205 2937103 .. 2937123 +  -2.5  -3.31144   GCCCCGGGAGGAACA            TCATGTTGA AAG TCAGCGAGA            TTCTGCGCGTCAAGG  44 60
CX034_RS14210 2937612 .. 2937622 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 74
CX034_RS14215 2938820 .. 2938845 + -16.9  -3.12595   TCACGCGCAGCGGCA         CGCCGCG-CGCA ATC TGCGTCGCGGCG         TATTGCATCATTGCA  80 219
CX034_RS14225 NONE
CX034_RS14230 2941955 .. 2941965 +  -4.6  -3.30124   GCCAGGCGTTCGGCC                 CGCT GAT GGCG                 TTCTGCGCGATAGCG  49 374
CX034_RS14255 2944792 .. 2944807 +  -4.6  -2.57132   CAACTTGTAACGGTT              GGCTGG CCAT CCACCC               CTTATCCAGCGGCGC  42 53
CX034_RS14260 2946885 .. 2946901 +  -2.2   -2.8372   TACGGCGGCCGCGGT              CTGAGC CTGCT GCTAAG              GTTTCATGGCAAATA  40 22
        folP NONE
CX034_RS14270 2949127 .. 2949146 + -16.4  -5.06414   CCGGACCTGCCCGAA            GGCCCGCC TGAT GGCGGGCC             TTTTTGTTGCGCGGG 100 48
CX034_RS14275 2950248 .. 2950275 + -21.4  -3.48276   CCGACGGGGTGCTGG        GGTGCCTGTCCC CGCG GGGACAGGCACC         TTGTATCGGGGCAGG 100 154
        ppk1 2954178 .. 2954197 +   -15  -5.09259   CGGCCCGCTGCCGCC            TGGCCGCC CGCG GGCGGCCA             TTTTATTTTGAAATA 100 43
        pstS 2955438 .. 2955459 + -10.1  -2.52464   CCTGGCCGGACCAGT           GAACGGCGA GCGA TCGCCGTCC            TGACTTCGCGGGGCG  56 68
        pstC NONE
        pstA NONE
        pstB 2958230 .. 2958264 +  -7.7  -3.49858   CGGAAGACTACATCA    CCGGCCGCTTCGGCTG AGGC CGGCCGGCG-GGCCGA     TTCTGGTATAGTTGC  60 9
CX034_RS14310 2958457 .. 2958497 + -11.2  -3.86346   TAGCCGCTCCATGCA TGTCAAAGCCCCGATACGG ATTT CCG-GTCGGGGCTTTCGCG  TTTCTGCGGGCGTGC  77 119
CX034_RS14315 2959643 .. 2959681 +  -3.8  -3.32844   TCGGGGTCGGGGTGC  CGCCCGGCGTGCTCG ATGACATAGG CGAACAC-CCGGCCG   TTCTCGCGTGCGAAC  47 104
CX034_RS14340 2966047 .. 2966057 +  -8.2  -3.53091   CATCAGCCCTTGCGC                 GCCC ACC GGGC                 TTTCGGCAAACGGGT  61 336
CX034_RS14355 NONE
        cobA 2972085 .. 2972125 + -14.7  -3.32498   TGCCCAGGCCCAGTT CGGCG-CGCGTGCCGCGC AGTTCG GTGCGGTGCGCGATGCCG  TTGGTGTGTACCGTA  79 220
        queA NONE
CX034_RS14410 2980921 .. 2980947 + -12.3  -2.70932   GCGCGGGGTCGACTA        GGGCCG-GCC-CC CCC GGCGGCGCGGCCC        TCGTTGCGCCGCGCC  65 25
        yajC 2981421 .. 2981439 + -17.4  -3.65046   TGTAAGGTCACACAA             GGCCCCGC GTG GCGGGGCC             TTGTTCCGCTCACCC  91 36
        secD 2983386 .. 2983411 +  -2.5     -3.37   CCCTGCCGCCCGCCG         TCC-TGATACGC AAG GCGAAACATGGA         ATTTTTCCGGATTCA  46 54
        secF 2984365 .. 2984394 + -22.2  -5.81412   CCCGGTAGTAAAAAA       CCCTGCCCGGCC AAATGC GGCCGGGCAGGG        TTTTTTTTACATGCA 100 48
CX034_RS14430 2986069 .. 2986092 +    -8  -3.61398   CGTCGTCAAGCAGCA          CTTCGGGGCG CGCG CGCCACGACG           TTCTTGAGCACCCAG  60 403
        miaB NONE
CX034_RS14445 NONE
        ybeY 2989556 .. 2989591 +  -5.3  -3.31905   GCGCCGCGCAGATTG    GC-GCCAATGCGCCCC AAATC GGGGAACAATGGCCGC    TGTTGTATGCAAAAT  51 43
CX034_RS14455 NONE
CX034_RS14460 2992621 .. 2992660 +    -5  -3.53444   TAGACGATGACGCCG GTGTCGTGG-CTTGC-GC ACCAGG GCAGCAGGTCCGCGGCGC  TTTCGCGGCGGATGG  52 440
CX034_RS14470 NONE
CX034_RS14475 2993722 .. 2993735 +  -8.1  -2.80398   GGTGTAGAAGTTACG               CCGCT GCGG AGCGG                TAGTTCAGTTGGTTA  51 54
CX034_RS14480 2993820 .. 2993841 + -14.5   -5.7946   AAAAAATTCCGAAAA           GCCAGTTGC GTAA GCAACTGGC            TTTTTTTCTTCCCGG 100 40
CX034_RS14485 2995267 .. 2995286 +  -4.8  -3.28712   GCGAATTGGCTTCGT            CGCGGCGC TCCT GCGGCACG             TTGTCCAGCAGCACC  49 235
CX034_RS14550 3007445 .. 3007479 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 493
CX034_RS14560 3008718 .. 3008730 +  -4.7  -2.90496   GCCCAGCCGTCCGCC                GCAGC ACC GCCGC                TGATTTCCCGCGGGC  44 10
CX034_RS14565 3009133 .. 3009160 + -11.2  -2.75074   GCCCCGATGAAGATG        GCCGGATCGACG CGCG CGTCGTTCAGGC         TGATGTTCCAGTGCA  59 70
CX034_RS14605 NONE
CX034_RS14610 3016373 .. 3016383 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 238
CX034_RS14615 3017589 .. 3017606 +    -4  -3.60805   CCGCGCGCCACGCCG             GCGGGC AGGACG GCCCGG              TTTGCGCTACGCTGT  51 44
CX034_RS14620 3018338 .. 3018359 +  -8.1  -3.64599   GGCGCCCCGGTCACA           CGAATGTTGC ACC GCAACA-TCG           TTTGCGGTGTAATAG  63 48
CX034_RS14625 NONE
CX034_RS14630 NONE
CX034_RS14635 NONE
        fabI 3024184 .. 3024195 +  -7.2  -3.33483   GGAATCGGCACCTCG                GCGC CGCG GCGC                 TTCATGATTTCGATC  55 470
CX034_RS14660 3029114 .. 3029124 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS14665 3030135 .. 3030148 +  -3.1   -4.2074   CACAACTAGCTGCCC               GGTTT GAAG AAGCC                TTTCTCTCTTGGGAG  63 32
CX034_RS14670 3031400 .. 3031426 +   -13  -4.65895   CCATGGCAGTACGTA        CGCCCGGCCGC CTCACC GCG-CCGGGCG         TTTTTGCGTCCGGCG 100 79
CX034_RS14690 NONE
CX034_RS14695 NONE
        folD NONE
CX034_RS14705 3043463 .. 3043498 +   -19  -2.59431   TGCAAGCCTGACCTC    TCAGGTGCCTGTCCCC GCAG GGGGACTGGCACCTGC     TGACTTCTGGACGCC  87 30
CX034_RS14710 3044266 .. 3044283 + -14.1    -3.965   ACCCAATGATCCGGA             CCGCGCC CCAG GGCGCGG              TTGTTGCTTTTGCGC  84 32
CX034_RS14715 3044675 .. 3044705 + -25.6  -4.07568   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 44
CX034_RS14735 3051166 .. 3051195 +  -4.3   -4.1822   CACCACCCGCAGCCC       CACCAG-TTCGC ACATGCG GCGAATCTGGCG       TTTCTTGCCCTCGCG  63 182
CX034_RS14745 3052408 .. 3052436 + -10.2  -4.07885   CGCTGGCGCGCGCGC       CCGTCGCGCCGCG CTGA CGCCGC-CGGCGG        TTTTGACGCAGAATC  78 9
CX034_RS14755 3055158 .. 3055174 +  -2.2  -4.42238   CGTCCGACAGGGTGA              CCTCGA CGCTC TCGATG              TTTTCCTTCAACTGC  68 234
CX034_RS14765 3057601 .. 3057612 +  -7.2  -3.78953   CTTCCACTTGCTGCA                CCGG CAGG CCGG                 TTTCCTCCTGGGCCT  64 435
CX034_RS14780 3060194 .. 3060214 +  -8.1  -3.01712   CCTGGTGTTGAAGCC            GGCGGGCCC CGA GGCCCCGGC            TCTTCGCGGACCACG  53 438
        mltB 3075836 .. 3075848 +  -4.7  -3.57144   AGATCTTCGGCATGT                AGGCC TCG GGCCA                TTTGCGGATGCCCGG  54 322
CX034_RS14935 3093085 .. 3093105 + -18.3   -5.4505   GCCGCTACAATGAGG            GGGCCTCGC ATA GCGAGGCCC            TTTTTTCTTGCCGCG 100 52
        ubiG NONE
CX034_RS14945 3094617 .. 3094639 +  -2.7  -2.77899   GCGGGCCCCATGCCC          GT-GCCGG CGCCACAC CCGGCCAC           TGATTGCTCCACCCA  40 59
CX034_RS14950 NONE
        ssrA 3096441 .. 3096463 + -13.6  -5.85178   CAAGTATTTACCTAA           TAGCCAACTT CAA AAGTTGGCTA           TTTTTTTTGGCTGTT 100 57
CX034_RS14960 3096708 .. 3096736 +  -6.9  -3.02471   GCGGGGCAAAATAGT        TTGTTAATGTGTA CTA TACACATTAAAAG        TGTGTATAGTACACA  51 19
CX034_RS14965 3096939 .. 3096965 +  -7.9  -2.84298   GGTTTGAAGTGAGAC         ACAAGCCCCGA AGCAA TCGGGGCCTGC         TAGTTGTGAACTGTC  52 29
CX034_RS14975 3098467 .. 3098504 + -11.3   -3.6682   TCCGACGCACCCAGC   AGAGAGCCCCGA-CTGGA CAA TCCGTATCGGGGCTCTCG   TTTGCGTGGGTAGCA  73 55
CX034_RS14985 3100890 .. 3100924 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS15000 3103449 .. 3103482 + -13.1   -3.0497   GACGGCACTCCGTAC     ACGAC-CGCTTCGCGC ATG GCGCGCAGCGCGTCGG     TATTCCAGATACTCT  70 111
CX034_RS15010 3105986 .. 3105996 +  -2.4  -3.02381   CGGAAACCAATTCCC                 CCAG ATG CCGG                 TCTATGGTGTTCTGC  41 119
CX034_RS15015 NONE
CX034_RS15025 NONE
CX034_RS15030 3111007 .. 3111038 +  -5.6  -3.14132   TCAGGCGCAGGGCCA      GCGCCGCCACCGCG TCCT CCAGGTGGCGCGGC       TTGCTCGCCCCCACG  47 102
CX034_RS15045 3114756 .. 3114775 +  -2.8  -3.53761   TTGACAAGCGCCCCC            GCGACGC CCAAGAT GCG-CGC            TTTCGCCGCCCCTTG  49 37
CX034_RS15050 3115348 .. 3115382 +  -7.8  -2.58999   GCGTAAGTCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS15150 3135862 .. 3135873 +  -5.8  -3.53811   TATCGCGCCGCTGCA                CCCT GGTC AGGG                 TTTCGGGCAGATCGA  57 414
CX034_RS15160 3137361 .. 3137408 +  -4.1  -2.71712   GATCGCCTCCTTGGG CGCTGCGC-GGCCG-ATGCGC-CG GCG CGCGCCCGTACGTCCAGTGTAGCG ATTTCGGCGCCGCGC  41 220
CX034_RS15180 3140750 .. 3140784 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS15195 3144388 .. 3144403 +  -3.2  -2.87132   GGCTGACCGAGATGC              TGCTCG GTTC CGAGGA               TCTGTAAGGAGGCCA  41 3
        ilvN 3144911 .. 3144938 +  -8.2  -2.55074   GGATACTGAAAATCT        GACCGGCGCGCC TGGC GGCGCGCCACCC         TGCATTAGCATTCAC  52 24
        ilvC 3146051 .. 3146068 + -14.1  -5.79595   GCAGGCTGGTCCAGA             CGCGCCC CACG GGGCGCG              TTTTTTCTTTTCCGC 100 75
        pssA 3147122 .. 3147135 +  -8.1  -3.27022   CCTGGCGCACGCTGG               GCAGG CCGA CCTGC                TTGATCTCGGCTGGC  56 199
CX034_RS15220 3147702 .. 3147725 +  -4.5  -3.63367   GGCAACAGCGTAACA          GGGCGCCCGG TTGTC TCGGG-GCTC          GTTTTTCTTGAAACC  55 28
CX034_RS15225 3148086 .. 3148121 + -16.8  -5.04601   CTCCCCATGACGCAA    CCGTGGTCGGGGCGAC GCAT GTCGCAACGGCCACGG     TTTTTCATTTGTAAG 100 54
         pnp 3150332 .. 3150349 + -14.1  -4.66163   TTCCTGACGCAAGAA             CGGCGCC CGCG GGCGCCG              TTTTTGCGTCCGCAT 100 50
CX034_RS15235 3151313 .. 3151347 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS15245 3153763 .. 3153786 +  -3.7  -3.73775   TCACATGGAAATCCT          TGGGGTCGC TGTAGC GCAGCCCCG           TTTCGTAAGGCTGCG  55 336
CX034_RS15260 3155681 .. 3155713 +   -14  -4.66318   TAGCGCCAGCCGGAC      GGCGGGCGCGCCGG ATCGC CCGGTGCGCCCGGA      TTTTCTTGCCCTGGT 100 38
CX034_RS15265 3156561 .. 3156573 +  -5.5  -3.02074   CGCCGCAGCTTAAGT                TTCCG TTC CGGAG                TCTGTAATGTCTTTG  47 28
        secG 3157036 .. 3157065 +    -3  -4.09685   TGCTAGAATGCCCGA      CTTT--CCAGGATC TTCG GATCCTGGTCGAAG       TTTTGCAGGATGCCG  59 35
CX034_RS15275 3157222 .. 3157247 + -13.3  -4.91109   AAAGCCAGCAAAAAA         GCCCATATGCG TCAG CGCCTATGGGC          TTTTTGTCGTCCAGG 100 86
CX034_RS15280 3160143 .. 3160168 +  -2.4  -3.58343   CAGGGCCCCGGCCTC         CCGGACCAGC AGTTGC GCCAGTTCGG          TTTCCCGATGCTCCG  50 123
CX034_RS15290 3162368 .. 3162406 + -12.4  -3.87994   TCCTATCGGACGCGC  CTGTCCGCGGCGTAGCG TCCGTC CGC-ACGGCGCGGGCGG   TTTGTCGGCATCACT  81 11
CX034_RS15295 NONE
CX034_RS15300 3165370 .. 3165380 +  -2.4  -3.35679   GTCGGTGCTGGCCCT                 GCGC GAA GCGA                 TTCTCGATCGGGCCG  46 494
CX034_RS15310 3167549 .. 3167577 +  -2.9  -3.86015   CCACCGCACGCCGAT        GACCGCGAGTTGG TGC CCAAAGCGAGGAC        TTTGTGGGACAGATA  56 91
CX034_RS15315 3169045 .. 3169059 +  -5.6  -3.53091   GCTGCTGTTCCTCGC               GCAGCG CTT CGATGC               TTTGGCCGCACGCCT  52 374
        metC NONE
CX034_RS15335 3173116 .. 3173174 + -18.7  -4.56597   TTCCGATTCGAGCAG GTCCG-GCGCCGCGGGCG-GCGCCGGTGG TTG CGTTCGGCCCGCGCCCGCGGCGCGTGGCC TTTTTCAACGAAGAA 100 66
CX034_RS15340 NONE
CX034_RS15345 3176260 .. 3176272 +  -3.3  -3.63627   CAAGGTCCGGTCCGA                CCCCA CCG TGGCG                TTTCGCATCTGAACG  53 1
CX034_RS15370 3183658 .. 3183682 +  -5.6  -4.00042   TTGCAGCATGGGTTG         CGCGGCATGGC GCGG GCCG-GCCGCA          TTGTTTGATGGCGCG  63 63
         azu 3184372 .. 3184393 + -11.5  -2.62184   ATGTGCTCGGCCCGC           TCGACCCGC GCCT GCGGGCCGA            TGATCTCGCGAAACA  59 142
CX034_RS15405 NONE
CX034_RS15410 NONE
CX034_RS15415 3195474 .. 3195487 +  -3.7  -4.35461   ACGCGGCGGCCTGAG               CGGGC GCGA GCCCC                TTTTCATCGTCTTGA  68 59
CX034_RS15420 3196393 .. 3196415 +  -3.3  -3.38046   TGGCCAGCGGCTGGA           GGCGGCATG ATGCG CGTGCTGCA           TATTTCGGATACCCA  48 16
CX034_RS15425 3197223 .. 3197237 +  -9.2  -3.14795   CGGATGACGCGCGCC               GCGGCG CGA TGCCGC               TGTTCGTGAACCTTT  59 34
CX034_RS15430 3198216 .. 3198231 +    -6  -2.66326   CTTGCCGTCGCTGAA              CCGCTC CAGG GTGCGG               TCGATTTCCCGTTCA  45 207
CX034_RS15460 3201938 .. 3201973 + -26.4  -4.24326   GGGCCTCGTGCCCGC    GCGAAAAAAGCCGCCC TTCG GGGCGGCTTTTTTCGC     TTTTGAATCATGTTT 100 86
CX034_RS15465 NONE
CX034_RS15470 3202944 .. 3202960 +    -5  -3.05384   TGCGCGCTGAACCAC              CGGCGC GGGCG GCGCGG              TTCGATCGCGCCGCC  45 31
CX034_RS15475 NONE
CX034_RS15480 NONE
        nuoE NONE
        nuoF NONE
CX034_RS15495 NONE
        nuoH NONE
        nuoI NONE
CX034_RS15510 NONE
        nuoK NONE
CX034_RS15520 NONE
CX034_RS15525 NONE
        nuoN NONE
CX034_RS15535 3217090 .. 3217106 + -13.7  -5.78622   GCCGCTTCAGCGATA              CCGCCTC CAT GAGGCGG              TTTTTTTTCGCCTAC 100 50
CX034_RS15540 3219624 .. 3219644 + -11.8  -4.98531   ACCCCGCCGTTCCGA            CGGCCTCC CGCAA GGGGGCCG            TTTTTCATTTCCGGC 100 52
CX034_RS15545 3222103 .. 3222119 + -15.1  -6.09133   GCGCAGCAGGGAAAA              CCGGCGC ATT GCGCCGG              TTTTTTTTTGGCATG 100 49
CX034_RS15550 3222951 .. 3222980 + -10.6  -2.65808   GAATTCGGCCACTTC       GCCGGCGGCCTG CCGGGT CAGGCCGACGAC        TGCGTTCTTGGCGGT  55 266
CX034_RS15570 3227467 .. 3227496 + -23.7  -3.03006   CCGTCAAGTGTTCAT       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TATGTGTGGCTTACT 100 114
CX034_RS15585 NONE
CX034_RS15590 3233091 .. 3233101 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS15600 3234119 .. 3234150 +  -8.7  -3.61398   AGCTGGCGTGCGCTT      CGGCGTGGTAGCGC CCCAC GCGCT-CCACCTCG      TTCTTCGAACCCAGG  62 39
CX034_RS15615 3238678 .. 3238688 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS15620 3239727 .. 3239748 + -10.1  -3.01712   CTCTACAATCGGCAG           CGCCCGG ACGTCGAG CCGGGCG            TATTGCCGGCCGCGC  60 60
CX034_RS15625 3240870 .. 3240889 +  -4.4  -3.45571   GCCGATATCCATTGA            TGTATATA GTCA TGTATACA             TTGATATTTCCCCAC  51 162
CX034_RS15630 NONE
CX034_RS15635 NONE
CX034_RS15640 NONE
CX034_RS15645 NONE
CX034_RS15650 NONE
CX034_RS15655 NONE
CX034_RS15660 NONE
CX034_RS15665 3250141 .. 3250181 +  -3.6  -3.65046   TCGAGCGGCGGGCCG  CGCGGCGCCCGCCGCCGG CCCGT CCGGCGCCCGGCCAGGAG  TTATTACAATGACAA  54 44
CX034_RS15670 3251050 .. 3251063 +  -5.9  -2.78935   CGAACCCGTGTGCTC               GCGGT TGCC GCCGC                TATACTGGCCGATAT  46 86
CX034_RS15685 NONE
CX034_RS15690 3255650 .. 3255661 +  -5.8  -3.01712   ACGGCGGCTTCTACA                TGCC CTGA GGCA                 TGTTCAAGCCAACAC  47 18
CX034_RS15695 NONE
CX034_RS15700 3257810 .. 3257821 +  -5.8  -3.93695   TTGCGCCAGCGGATT                GACC CGCA GGTC                 TTTCTCGCTGGTGAA  63 522
CX034_RS15760 3273646 .. 3273665 +  -4.3  -2.71144   TTGATCTGCATGTAC            TCG-GCCA GGCCA TGGCGCGA            TCCTTCGCGGCCGTA  40 84
CX034_RS15795 3283725 .. 3283750 +  -8.9  -3.70902   CGCGAACGCAAAAAA         GCCGACACCAC GTTT GCGGTATCGGC          TTTCGCTATGCGCCC  65 63
        rplU NONE
CX034_RS15820 3287242 .. 3287263 + -17.3  -5.45802   TCCCCGGAACGGCGA           GCCCTGCCG CACG CGGCAGGGC            TTTTTGTTTTCAGGC 100 53
        obgE NONE
CX034_RS15830 3289741 .. 3289763 +  -4.1  -3.13073   ACCAACCAACATGCC           GGACAAGCC CCTCC GATTTGTCC           TGTATTCCTGACCGT  45 62
CX034_RS15840 3291455 .. 3291489 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 310
CX034_RS15855 3292797 .. 3292820 + -10.2  -4.41348   TGGAATAATGCCCCT          GCCGCGC-CCC ACC GGGCGCGCGCC          TTTATTTCAGCGAGA  88 56
CX034_RS15860 3295192 .. 3295202 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 183
CX034_RS15865 3296224 .. 3296268 + -10.6   -2.8294   ATCGGCGCCGTGTTC CCACGCGCGCAGCGGGAGCGGC AGT GCCG-TAGCGC-GCGCGTGAGG TGCTTGTGCACCATA  57 43
CX034_RS15875 3297903 .. 3297933 +  -6.2  -4.27584   GGCCGTTCCGTCTTA       GAGATTGGTAGTGG TAA TTACTTTCAATCTC       TTTTCGGTTAAACAT  70 135
CX034_RS15880 3300549 .. 3300562 +  -3.7  -3.36803   CGTTCCGGCGCGCCT               GCAGG ACCA CCGGC                TTGTCGATGCCCTTG  47 217
CX034_RS15905 NONE
CX034_RS15910 3307146 .. 3307169 +    -3  -4.17556   GATGGTGACGGCGTA          GCCGGACACG CGCG CCTGTTCGAC           TTTCTTGCGGATCTC  61 285
CX034_RS15920 3309631 .. 3309641 +  -6.8  -3.09516   ATCCACAAGGGGCGG                 CCGA TGT TCGG                 TTACATCCTGCGGCG  52 101
CX034_RS15925 NONE
CX034_RS15930 NONE
CX034_RS15935 NONE
CX034_RS15940 3314546 .. 3314556 +  -2.4  -4.41348   CGTCCCGGTGGACCC                 CGTG TAA CCCG                 TTTATTTCCCAGCCC  65 19
CX034_RS15945 3316145 .. 3316184 +  -5.7  -3.54408   GACCGCGGCTTCCAG GAGTTCGG-CGTCGCTGTC GGCC GACAGCG-CGACCGAGCAG  TTCATTTCGCTGGGA  57 197
CX034_RS15955 3317540 .. 3317550 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 121
CX034_RS15960 3318589 .. 3318610 + -10.1  -3.01712   CTCTACAATCGGCAG           CGCCCGG ACGTCGAG CCGGGCG            TATTGCCGGCCGCGC  60 60
CX034_RS15970 3319801 .. 3319828 +  -6.2  -2.79188   CGCCAGCGGATCGGG        CGTGAGCGTGCCG CGG CGGC-CGTTGGCG        TAGTTGCCTTCGATG  46 163
        lptD NONE
CX034_RS15995 NONE
        rsmA 3327377 .. 3327415 + -10.3  -3.01712   GCGCCACCACCGGCA  CGCCGG-CGGCGCTGGC GATGCGG GCCA-CGCCGGCCGGGG  TCTTGCCGCGCAGCG  59 254
         pyk 3330301 .. 3330334 +  -5.2  -3.61398   GTTGAAGCCGTCCTT     GGCGCCGG-CGATGA AGGTC TCGTAGACCGGCACC     TTCTTCCAGGCGCCC  54 454
CX034_RS16100 NONE
CX034_RS16105 3346531 .. 3346568 +  -6.1  -2.66787   GCTGAGCGTTCGCGC   GCATCGT-CGCGCACGCC GCT GGTGGGCCCGGGCGCTGC   TCATCTCGCTGTTGC  46 36
CX034_RS16115 3347816 .. 3347831 +  -6.2  -5.00616   CTATGCTCGCATACA              CTGTAT GTCC ATACAG               TTTTTTGGGCCACAA  86 294
CX034_RS16130 3348631 .. 3348653 +  -7.6  -3.63991   CGAGCGCCAACAGCA           TTAGCGGCCG CAG CGGCGGCCAA           TTCTTGAGCGTCATC  60 278
CX034_RS16250 3365221 .. 3365240 +  -4.2  -2.91274   GATCGGACCGAAGCC            GC-CGGCGA CCT TCACCGAGC            TATGCTTCAGCTGAG  43 161
CX034_RS16295 NONE
CX034_RS16300 NONE
CX034_RS16305 3373623 .. 3373640 +  -3.3  -3.54424   ATCGAGGAAGAAGCG             GCG-GCGC TGC GCGAACGC             TTTCAGGGCGTCAAC  49 52
CX034_RS16310 3374709 .. 3374724 +  -4.6  -3.01712   CAGCGCAAAACCAAC              AGTGCC CTGG GGCACG               TGTTGCAGAGACCCC  45 47
CX034_RS16315 3375107 .. 3375122 +  -3.2  -3.94438   CACCCGACATCCGAA              GAAAGC ATAT GCTTGC               TATTTTGTTAGCATG  58 167
CX034_RS16330 3378312 .. 3378335 +   -21  -2.60496   GGTAAGCAAGCGCGC          GGCCGCCGCG CTGG CGCGGCGGCC           CTGTTTCAGGCCGCC 100 36
CX034_RS16365 3384680 .. 3384720 + -12.4  -2.73875   GCTGAGCGCGGGTGT CGCAGTGGCCGGCGCGCGC CCGG GCGCGCGCC-GCTTCAGGG  TCGTATTCCGAGGAA  65 36
CX034_RS16370 3386165 .. 3386194 + -15.7  -3.01712   TGGCCTGACGCACGC       GGAGGCGGCGCGCC TCA GGC-CGCCGCGTCC       TCTTCCAGCCAGGGG  77 33
CX034_RS16385 NONE
        recQ 3390619 .. 3390646 + -16.2  -3.14344   GGCGGTTGGCGATAC        GCGGCGTGCCGC GCGA GCGGCGCGCCAC         TTCGTGCGCGCCGTC  80 410
CX034_RS16400 3392468 .. 3392486 +  -6.6  -3.40403   AATGATGCTACAGGG             GGCTGCGC GAT GCGTATCC             TTGTCATCGGCGGAA  55 90
CX034_RS16405 3393591 .. 3393621 +  -6.6  -3.39784   TCCGCGCCCAGCTTG       CCGCGCATCTCCAG CAG CAGGCGCTCCGCGG       TCTTCTTGCCGATGC  55 228
CX034_RS16440 3399393 .. 3399446 +  -6.5  -3.18264   CTATTCGCGCATCAG GGCTTCGATCTCGCGCGCCTGCACCG GCA CGCCGCGGGTGA-TGAGTTCGCAGCC TTCCTCGGTCACCAG  51 50
CX034_RS16450 3402265 .. 3402289 + -14.3  -2.87132   CAGAGCACCCATCTG          CCGCATCCTGT CAT GCAGGGTGCGG          TATGTCCGACGCGCA  71 218
CX034_RS16455 3403003 .. 3403017 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 215
CX034_RS16465 3405062 .. 3405073 +  -2.2  -3.53566   TGCGGGTTTTGGCAT                CGGA CCAG TCTG                 CTTTTCTTCTTGGCT  48 224
CX034_RS16470 3406284 .. 3406322 + -18.8  -2.79831   GCGCGTCGTCAACTA   CAATCAGGCGGCGAGGCG TCG CGCCTCGCCACCTGCTGG   CTGTTTTCGGATGAC  87 58
CX034_RS16475 3407227 .. 3407259 +   -10  -3.53012   TGAGCGCGGCTTCGA     TACC-CGGCCTTATT CCGG AATCAGGCCGTGGTA      TTTGCGGCCCAGGGC  67 38
CX034_RS16485 3409696 .. 3409715 + -11.4  -3.21354   TGGATGCCGGCAGCG            TTGCGCGG CCAG CCGCGCGA             TTGCTGGCTGTATGC  66 53
CX034_RS16510 NONE
CX034_RS16515 3413814 .. 3413828 + -12.8  -4.27316   CTGCGCCAGCTTGCT               GCCCCC CAG GGGGGC               TTTTGCCTTGGGGCG  91 69
CX034_RS16520 3415575 .. 3415593 +   -11  -3.13403   CGCCTGCACCAGCAG             CGTCGGGA AGT TCTCGACG             TCTTCCTCGCCCAGC  64 190
CX034_RS16530 3416702 .. 3416712 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS16535 3417727 .. 3417752 +  -9.7  -5.00616   TCTAGCGCATTGCCC         TGCACGCCCCCC CGG GGGGGGCCT-CA         TTTTTTCCGGAAACC  95 36
CX034_RS16540 3418698 .. 3418726 + -12.3  -2.87132   TGCTCCTTGTTGCGG        TGCCGCATCGGCG CCG CCCCGGGGCGGCA        TCTATCCGCAACCAC  66 139
CX034_RS16545 3419749 .. 3419761 +  -9.1  -3.71917   AGCCTGACTAACAGG                CGACC TGG GGTCG                TTTCCGGTTTCCGGT  68 183
CX034_RS16550 3424218 .. 3424276 + -22.6   -2.5474   CGGCGGGCGCGCAGG CCTCG-CCCGATCGGCCGGCCGGGCCGCGC GAT GCGCGGCCCGGCCG-C--ATTGGGACGCGG CCTTTATTGCTTTTC 100 57
CX034_RS16560 3426292 .. 3426312 +    -9  -5.40072   GCAGAGCTGGAATTC           G-GGCCACC TTCG GGTGGCCTC            TTTTTTTGCCCAAGG 100 95
CX034_RS16590 3431128 .. 3431150 + -16.2  -3.34715   GACACCATGAGGGGC           GGCCGGCCCG GTT CGGGCCAGCC           TGTTTCCAGCACGTC  82 158
CX034_RS16650 3442190 .. 3442238 + -13.8  -3.35679   CGCCGCAGGTCGTTG CGGCCCGGCGTGCCCGGTCCGC GCCGACA GCGG-CCGGGC-CGATGGCCCG TTCTCACTGGAAGGG  77 207
CX034_RS16655 NONE
CX034_RS16660 NONE
CX034_RS16665 3445881 .. 3445930 +  -9.7  -5.07011   ACCGCATCGGCGGCG CGTATTAGGGCTGGCGGGCGTCC GTCG GGACGCCGCCCGGCCCGGGATCG TTTTTCCTTTATCTG  95 18
CX034_RS16675 3449203 .. 3449254 +  -3.6  -3.14132   TTGCACCCTTCACAG CGCGCCCGA-GCCGCGCCCGGC GGCCAGCCAG GCCGGGT-CGGCGTAGGAGGCG TTGATGCGCGAGGCC  45 125
CX034_RS16685 3451071 .. 3451087 + -13.7  -5.60993   GCGGCCCACGAAAAA              GCCCTCC AGC GGAGGGC              TTTTTTTCTGAGGCG 100 47
CX034_RS16700 NONE
CX034_RS16705 NONE
        ftsY 3459144 .. 3459169 + -20.5  -2.90496   GTTCGCGCCTGCCCG         CAACGCCGCCC GTCC GGGCGGCGTTG          TCATTTCCAGAACGG 100 46
CX034_RS16780 NONE
CX034_RS16785 NONE
        nusB 3469598 .. 3469630 + -11.1  -3.72695   GCGGCGCTGACCTTC      CGCGGGCGCGCCCGC GCG GCGCGTCCGTTCGCG      TTTGCTGGCAGGAGT  73 31
        thiL NONE
CX034_RS16800 NONE
CX034_RS16805 3471844 .. 3471887 + -14.4  -3.28745   CAGGCACCCTGAGAA GTCAGCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGGGGGG TTACGTTCTTACCGC  75 119
CX034_RS16830 3478817 .. 3478840 + -19.6  -6.06723   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTTGGGAAG 100 44
CX034_RS16880 3489554 .. 3489564 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 192
CX034_RS16890 NONE
CX034_RS16895 3491517 .. 3491531 +  -3.4   -4.2828   ACTTCGCCGCCATCG               GGCAGC ACG GTCGCC               TTTTCCTGGATGCGG  67 245
CX034_RS16910 3494286 .. 3494312 +  -2.8  -5.06103   CGGGAGCAGCGCGGC         TTGTCCGGCTGC CCA GCGGTCTGGCTA         TTTTTTGCAAATTGT  79 442
CX034_RS16920 NONE
CX034_RS16925 3495052 .. 3495095 + -22.8  -2.72471   TGTCCTTCATCGCGC ACAAAACAAAATGCCCGCAA GCGA TTGCGGGCATTTTGTTTTGA ATTCTCTGGTGGCGC 100 80
CX034_RS16945 NONE
CX034_RS16950 3499927 .. 3499940 +  -5.9  -3.30474   GCCTGTTCGAGCGCT               GGCTG TAGC CGGCC                TTGCTAGTTGTGAAC  53 18
CX034_RS16975 3505645 .. 3505667 + -12.7  -4.57569   GGCGCAAAGAAAAAA          CCCCGG-CGC TTGC GCGACCGGGG           TTTTTGGGCACATCA 100 57
CX034_RS16985 3506585 .. 3506613 + -15.4  -3.72576   CGCGGCAAAGAGAAA       GCCCCGG-CAATC ATGC GATTGACCGGGGC        TTTCATGAAGGCAGG  85 46
         rnr 3509601 .. 3509626 +  -6.7  -4.08064   ATTGCACCGTAGACC         GGGCCGCAGGGC CCG GCCC-GCCGCCG         TTTTCCGGCGGCGTT  67 80
        rlmB 3510420 .. 3510442 + -12.6  -3.03124   GTAAACTCTTGCAGC           GGCGCGCCGT CGC GCCGCGCGCC           TCTTCGAACGTCCGA  67 37
CX034_RS17005 NONE
CX034_RS17010 3512507 .. 3512521 +  -3.4  -4.66537   AAGCTAGTATTGGCG               CGGCTC AGG GCGCTG               TTTTCTCTTGACAGC  71 105
CX034_RS17015 3513037 .. 3513049 +  -9.1  -3.64703   GGACGCAAAGGCAAA                TCGGC GCT GCCGA                TTTGCCTAACAAAAC  68 42
CX034_RS17020 3513271 .. 3513304 + -12.4   -5.4505   AAGCAGGCGCAATAA    CCCCG-GCGAGGGCGC ATCG GCGCAC-CGCACGGGG     TTTTTTGTTGCGCGC 100 92
CX034_RS17025 NONE
CX034_RS17030 NONE
CX034_RS17035 NONE
CX034_RS17040 NONE
CX034_RS17045 NONE
CX034_RS17050 3519674 .. 3519686 +  -4.7  -3.69068   GGACAGGCACCCTCG                CGCGG TTG CCGCC                TATTTCTTGCCGTCC  55 98
CX034_RS17070 3524154 .. 3524212 +  -4.3  -3.15544   GTGGCGCATTCCCAG --GGCAGCGCGCGGCCGGTCTGTGGGCTG GCG TAGCCCACCGTCCAGTGGCCCGCCGCCAA TTCGTCCGGGTGCCC  45 331
CX034_RS17100 NONE
CX034_RS17105 3530037 .. 3530047 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS17110 3531051 .. 3531063 +  -4.7  -3.57144   GACAGTTCACAGCTA                GCGGC CGG GGCGC                TTTGCGGCTCGGGCC  54 25
CX034_RS17120 3533435 .. 3533463 + -13.1  -3.14564   GCTCGAAGCGCTTCT        TGTCCACGCCGCC ATG GGTGGCGTAGGCA        TTCATGCGCAGCTGC  68 275
CX034_RS17150 NONE
CX034_RS17155 3538887 .. 3538913 +  -6.4  -3.87373   AAGCGGCCCTCAGTG         GGCCGAGTCGAG GGC CTTGCCGTGGCC         TTTCTGGCCGATCTG  62 50
         smc 3543997 .. 3544018 +  -2.9  -3.28447   AACCCATATTCGGAT           TTGCGCTGCC TTA GGC-GCGGGA           TATTCTCATGAGTGA  46 41
CX034_RS17170 NONE
        ligA 3547208 .. 3547237 + -19.5  -3.15663   CCCGGCAGCCGAAAA       CAAAATTGCCCGC GAAA GCGGGCAATTTTG        TTGATGGCGATGGCT 100 59
CX034_RS17200 NONE
CX034_RS17205 NONE
CX034_RS17210 3551366 .. 3551382 +  -4.3  -3.05471   CCGGATTAGGGTTGA              TCCCGGT GGG GTCGGGG              TGGTTATTTGATACT  45 131
CX034_RS17215 3552732 .. 3552755 + -19.6  -2.62735   TCTCCTGCTTCACCT          CGCACCGGCC TGAG GGCCGGTGCG           TCGTATGCGCCGTGT  93 101
CX034_RS17220 NONE
CX034_RS17225 3556012 .. 3556031 +  -7.8  -3.29461   CCGCGACATGGCCCG            CGCCGTCG AGCA TGATGGCG             TTGTCGAAGCCCTTG  55 392
        pncB 3567822 .. 3567839 + -14.1  -4.17048   GGTGTTCCAGCTTCC             GCCGGCC TGAG GGCCGGC              TTGTTTTCGCCAACC  91 16
CX034_RS17295 3568322 .. 3568361 +   -18  -4.08945   CGCGCCTCGGGACGG  TACAGGCATTGCGGCATC GGCC GATGCCGCAATGCCTTCA   TTTTGCCGGGATGGT 100 114
CX034_RS17310 3572067 .. 3572081 +  -4.2  -4.09685   CGGGGGCGGCCGCGT               GCCCTA CAC TAGGTC               TTTTGCACGCTCCGG  61 64
        argE NONE
        trpB NONE
CX034_RS17325 NONE
CX034_RS17330 3576362 .. 3576393 + -10.8  -4.67353   CCCGCCGGCAGTGCC      TGCGAACGCCCGGC CCAG GCCGGGCGTTGTTA       TTTTTCCATGCATGC 100 46
CX034_RS17340 3578346 .. 3578399 + -13.7  -3.68359   CCCTTGCCGCAGCGG GGACAATTGGCGGGTGCCAGTCCCC CTGC GGGGACAGGCACCCGAGGAGTGGTC TTATGATTTTCCGGC  80 86
CX034_RS17345 3579510 .. 3579536 + -23.8  -3.92869   GCACAGCAGGAAAAA         GCGGGTTGCGGC GCT GCCGCAACCCGC         TTTGTGCGTCAGTGA 100 66
CX034_RS17355 3584144 .. 3584156 +  -4.1  -3.42809   CAACTGGAGACGGCC                TGACC ATG GGTTA                TTCGTTGGTGGTATT  49 23
CX034_RS17360 3584870 .. 3584927 + -15.6  -3.27408   CTGTCTTACCTGGAT CGGCGCCATGCG-CGCGCTG--CCGTCGC CCG GCGACGGAATAGCGCGGCGCACGCCACCG TCTATTTGGGTAAGA  80 75
        msrP 3585913 .. 3585929 +  -2.1  -3.16564   AGCCTCTACCAGGGC              CTGGACC TGC GGGCCAA              TTACTGAGGTCCCCA  42 2
        msrQ 3586772 .. 3586806 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS17385 3588980 .. 3589011 +  -5.1  -4.03234   TCAGGTCGCGCACCA      GCTG-CGCCAGC CTGGCGGCC GCGGGCGTCAGC      TTTCTATGCCGCAAC  63 77
CX034_RS17395 NONE
CX034_RS17400 3591920 .. 3591969 + -13.5  -3.96148   GCCAGGCCACCGACG TGGC-CGCCC-GCGCCGCGGGCG AAAAGC TGGCCGCGGCGCTGGGCCAGCCG TTTATCGTGGAAAAC  84 219
CX034_RS17410 3593031 .. 3593048 +  -2.7  -3.14132   GCCGGCCAGGCCCGC             GGCAA GATAGGCA TTGCC              TTCGTCCAGCAGCAG  43 303
CX034_RS17420 3594366 .. 3594411 + -10.4  -3.05384   CTCATTCTTATATAA TGCGTCACGCGCTACTATTC GCCCAA GTTAAGTAGCGCGTCACGCA TTACATGGGCAAGGG  60 117
CX034_RS17425 3597816 .. 3597826 +  -3.2  -3.59979   AATCCTATTCTTGCC                 TTCC TCA GGAG                 TTTGCCATGCCCAAC  49 39
CX034_RS17430 NONE
        pruA NONE
CX034_RS17440 3602037 .. 3602050 +  -5.9  -3.34947   TCGCCGCATGCGTGC               CTGGC TGAT GCCGG                TTGTGGGCCTTGTTG  52 384
CX034_RS17450 3602879 .. 3602913 + -22.3  -3.53012   CTAGGCGCGCTGCCC    G-CAAAGGCCGCCCGG CATG CCGGGCGGCCTTTGTC     TTTGGCGCAACGCAG 100 42
CX034_RS17455 3603978 .. 3603988 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS17465 3604971 .. 3605010 +  -9.4   -3.5361   CCTGGACAAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  64 4
CX034_RS17470 3606222 .. 3606235 +  -5.3  -2.83403   CCGGCGGCATGGCGA               GAAGA CCTT TCTTC                ATTTCCTGCCGCGCG  46 206
CX034_RS17495 3612810 .. 3612840 + -12.5  -3.29144   TTGCACGACGCCCCC       GGCCACGTCGGCC AGCGC GGCCGACGTACCC       TTGTACGGCACGTGG  70 423
CX034_RS17520 3617404 .. 3617414 +  -6.8  -3.51825   CCATCGACGCCGCCA                 TGCG GAA CGCA                 TTCTCGTTCGAGTCC  58 378
CX034_RS17530 3620304 .. 3620316 +  -6.2  -3.60792   ACTTTCCACAGATCC                CGCC TGTCC GGCG                TTTCACCATTCGAGG  56 89
CX034_RS17535 3620705 .. 3620725 +  -2.5  -3.13906   GTCAAGGGCGGGTCT           CCC-CCGG GGTGCG TCGGCGGG            TGGTTTTCCGTTAGC  42 46
CX034_RS17540 3621269 .. 3621294 + -18.3  -5.42862   CCCGGCGCCGTACAC         GCCCCGCCGGCC GCA GGCCG-CGGGGC         TTTTTTTCGGCCTGT 100 51
CX034_RS17545 3622116 .. 3622144 + -10.3  -3.55444   TAGAGTGACACCAAT       GC-GCCGGCACGG CAAGC CCG-GCCGGCCGC       TTTCCCCCATCCAGA  67 89
CX034_RS17560 3625756 .. 3625790 +  -8.5  -2.71364   CCGCGTAGAGCTCGC    GGCTGATCACGCC-CC GGGT GGCGGCGTGCTCGGCG     TACTTGGCGCCCTGC  52 504
CX034_RS17610 NONE
CX034_RS17615 NONE
CX034_RS17620 3637514 .. 3637530 + -15.1  -5.75945   TTCCGTTTTCCTCCT              GCCGCGC TCT GCGCGGC              TTTTTTTTGGGGCGT 100 55
CX034_RS17625 NONE
CX034_RS17630 NONE
CX034_RS17635 NONE
CX034_RS17640 NONE
CX034_RS17645 NONE
CX034_RS17650 3644402 .. 3644438 +  -9.9  -3.69395   GGGCAGCGGCCGCCG    CAGCACGGTGGCCGGCG CGG CGCTGGCCAACGCGGCG    TTGTTCCATGGTCGA  70 303
CX034_RS17660 NONE
CX034_RS17665 NONE
CX034_RS17670 NONE
CX034_RS17675 NONE
        lpdA NONE
CX034_RS17685 3652532 .. 3652553 +  -4.3   -2.5474   GGCCTGCGCCAGCAG           CC-GTTCGGC GTT GCCGTGCAGG           ATCTTCTCCATCGCG  42 103
CX034_RS17705 3657160 .. 3657193 +  -7.3  -3.65902   GTCAGCGGGTGCCTG     TCCCCCGTGCGGG GACAGGCA CCCGGGTGGGGGG      TTTACATGCGCTCGA  61 50
CX034_RS17715 NONE
CX034_RS17720 3659486 .. 3659524 +   -11  -3.20723   TGCCCGCTGCCGATG  ATGC-CCACCAGCGGCG CGAACA CGCCGGTGGTGGCGCAG   TTGAGTTCCTCGACA  64 224
CX034_RS17745 NONE
        grxC NONE
        secB NONE
CX034_RS17760 NONE
CX034_RS17765 3667709 .. 3667746 + -13.3  -2.79183   CGCGAAGATGCGCGG   CGCAGCCGC-GCCGGTGG CCG CCAGCGCCTGCGGCAGCG   TGTCGTGCACCTGCA  67 293
CX034_RS17780 3669898 .. 3669910 +  -9.1  -4.09685   GGTGTCCTGGACGCC                CTGGC CGC GCCAG                TTTTGCGCCATGGAC  72 173
CX034_RS17835 NONE
CX034_RS17840 NONE
CX034_RS17845 NONE
CX034_RS17850 3685751 .. 3685801 +  -8.1  -4.32857   GAGGACGGGCTCCCA GGGTTCGGCAGGTGCCTGTCTCC CGTGC GGGGACAGGCACCTGAGTGTCAC TTTGTCTTTGCCAGC  77 49
CX034_RS17930 3702666 .. 3702678 +  -7.7  -3.61398   CAGCGCGATCGTGCC                CGTCA GGT TGACG                TTCTTGGGAAACCGG  60 299
CX034_RS17940 NONE
CX034_RS17945 NONE
CX034_RS17950 3705316 .. 3705326 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS17960 NONE
CX034_RS17970 NONE
CX034_RS17975 3708582 .. 3708624 + -14.2  -3.33696   CATGAAGCACTGATG CGGTACG--GGGCGG-CGGCC CGCA GGCCGTCCGCCCCGCGCACCG TTCATTCCAGGCGGA  75 28
CX034_RS17990 3711953 .. 3711977 + -14.9  -2.90075   CGCCGGTATCGATTT          CGCTGGCGGCC TGA GGCCGCCGGCA          TATGGTTCGAACGCC  73 12
CX034_RS17995 3713535 .. 3713549 +  -2.7  -3.72576   AGGCCTGGCCGGACA               GCGGC AACGG GCCGA               TTTCCTGCAGCAAGG  53 464
        kynU NONE
CX034_RS18025 NONE
CX034_RS18030 NONE
CX034_RS18035 3719544 .. 3719571 +  -3.2  -3.54424   CCCGTTCTTGATGTC        CGCGGC-GCGCGC GCC GCGCCCTGACCCG        TTTCCGACCGTCCCA  49 49
CX034_RS18040 3720792 .. 3720806 +    -7  -2.62983   CGAAGCGCGCCAGCA               GCGCCG GTT CGACGC               TGATCTCGGCCTGCC  48 293
CX034_RS18065 3723801 .. 3723828 + -19.2  -3.02324   GCGCCGTGTTGATTC        GGTGCCTGTCCC GACA GGGACGGGCACC         TGTGCTTTCGATCAG 100 57
CX034_RS18080 3726975 .. 3727016 +  -6.5  -3.11634   CCGGCCGAATCGCTG TCGGTGCCGGTG-AGCGATC TGT GATCGGTGCGCCTGCACGGG TTCCGTCATCTGGGG  51 2
CX034_RS18085 3728162 .. 3728212 + -18.9   -3.6579   GAGCGATCGACAGGG CGGCGGCGCCTGGCCGATGGCAGC CGGC GCCGCCGCCGGCCAGGCGG-GCTG TTGTTAGAATCCCTT  95 39
CX034_RS18090 3729073 .. 3729107 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS18105 NONE
        rocF 3732253 .. 3732263 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 80
CX034_RS18115 3733422 .. 3733436 +    -7  -3.41693   GCCCGATTTGGCGTA               GCCGGC CAC GCCCGC               TTCGTTCATGGTGGG  58 180
CX034_RS18180 3749193 .. 3749219 +  -2.1  -3.61178   CCCTGGCTGCAGGCG         TTCCGGCCTGC CGTCC GCTGACCCGAA         TTTCCGATCCATCCG  48 5
CX034_RS18185 3750431 .. 3750445 +  -2.7  -4.07568   GCAATACGCTATGCT               CGACG CGCGC CGCCG               TTTTCGCCGGCGCAG  59 70
CX034_RS18190 3750886 .. 3750910 +   -15  -4.57073   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG 100 49
CX034_RS18205 3753373 .. 3753383 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 71
CX034_RS18210 NONE
CX034_RS18215 3755061 .. 3755077 + -10.8  -5.10497   GGCCGTAGTTCAACA              GCCCGC CTCGA GCGGGC              TTTTTTGCGTCGGTT 100 47
CX034_RS18220 3755483 .. 3755493 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS18230 3756486 .. 3756531 +    -6  -2.89564   TACAACCTATTGACA GTTCACACCTAACCCCCACC CGCCCC GGTAGGGGCTAGGAGATAAC TGTGTCCGATACCAA  48 14
CX034_RS18235 3757089 .. 3757099 +  -2.4  -3.39895   GTGCAGGTAATGGCC                 CAGC TCG GCGG                 TTCGTTCATGAAGCA  46 114
CX034_RS18245 NONE
CX034_RS18250 NONE
CX034_RS18255 NONE
CX034_RS18260 3759432 .. 3759446 + -12.8  -3.02511   CCGCCTGATCTCCCT               GGGCGG CGC CCGCCC               TATTACCCACGTAGC  67 33
CX034_RS18265 NONE
CX034_RS18270 NONE
CX034_RS18275 NONE
CX034_RS18280 NONE
CX034_RS18285 3762276 .. 3762286 +  -8.2  -3.54424   CAGCAGCTCGCCTGA                 CCGC ATG GCGG                 TTTCGAGGGATAGCA  63 406
CX034_RS18305 3767282 .. 3767310 +  -4.4  -3.44622   ACTTCGACCGATTCC        CCGCGCTGGTTG GTCAG CGGCCAGCGCAC        TTCGTTCTGCGGGTC  49 329
CX034_RS18320 3769512 .. 3769531 + -16.4    -3.767   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC  91 219
        dnaA NONE
CX034_RS18350 3775142 .. 3775155 +  -2.3  -5.03145   CGCGCGCGAACGGTG               TGGCC GTGA GGCTG                TTTTTTAAGGCGTTA  79 81
        gyrB 3777662 .. 3777683 + -13.7   -4.4078   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG 100 53
CX034_RS18365 NONE
CX034_RS18370 3781445 .. 3781499 +  -6.3  -3.76759   CCTGCAGGCGTGCGC GAGGGGCGGCGTAT-ACTGGCTCTCGC CGC GCGAAGGCCGGCCAT-CGCCGTGCCGC TTTCCTGACCTTCAT  62 369
CX034_RS18380 3782737 .. 3782787 +  -6.3  -3.44848   GCAAAATCTGCAAAG CGGG-CTT-GGCTACATTGCGTTC ACTGGA GATCGCA-TGAAGCCCAAGACCCG TCTTTACTACGCCGA  55 79
CX034_RS18385 3783631 .. 3783644 +  -9.5  -3.26471   GCGTTGCAGGCCCGC               CCGGG CCGG CCCGG                TTACTATGGCCGTAG  61 40
CX034_RS18395 3786585 .. 3786614 +  -8.7  -3.09681   ATGATGCAGTGCAAA       TATTACGTTTACG TAAA CGTAAACGTAAAG        TTGAGTCGGGTTTTC  56 487
CX034_RS18410 3788378 .. 3788412 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 218
CX034_RS18430 3793302 .. 3793315 +  -3.1  -2.79796   CATCAACGCCCCACG               GGTAT GCCC ATGCC                TATCATCGAATCCCG  40 117
CX034_RS18435 NONE
CX034_RS18440 3796982 .. 3797020 +  -6.7  -3.14931   CGCTGATCGAAGTGA  AG-TGA-ATGACGCCGGGC GCG GCCCGGCGTCGGGTCAGCC  TTGCTCCGGCGTGAC  52 21
CX034_RS18455 3799788 .. 3799825 +    -9  -2.70932   TGCCCAGCGCCGGCG   CGGGCGCGCCG-GGCTC CACCC GCGCCACGCCGTGCTCG   TCGTTGGCGGCGAGA  52 188
CX034_RS18465 3802006 .. 3802018 +  -6.2  -2.64155   CGTCCCGACTCCAAT                GCGC CAATC GCGC                TGCCTTTCCGCCAGG  46 70
CX034_RS18470 3804143 .. 3804172 + -20.9  -3.29144   CGGGCGCCGACGCAA       TGCACAACCCACC GCAA GGTGGGTTGTGCA        TTCTGGACGCGGTCG 100 59
CX034_RS18475 3806611 .. 3806630 +  -3.4  -4.07568   GAAAACGTGAAGACC            GCGCGCAG CGCA CTGCCCCC             TTTTACAGAGCCGCG  59 87
CX034_RS18480 3807300 .. 3807335 + -16.8  -2.70525   GATGCGGCCGCGCCA    GACATGGCGCGCCGGC CCGT GCTGGCGCGCCATCGC     ATTGATTTCCGGAAC  80 39
CX034_RS18495 3813603 .. 3813625 +  -5.4  -3.50853   GCACCGCGCGGTCCA           CGCGACCGAC GCG GCCAGTTGCG           TTATCGTTGCCGCAA  54 102
CX034_RS18500 3814727 .. 3814737 +  -8.2  -2.82635   GCGATTCGTGCGCAA                 GGCC CGG GGCC                 TGTGATGATCGAGCT  54 10
CX034_RS18505 NONE
CX034_RS18510 NONE
CX034_RS18515 3817154 .. 3817175 +  -3.5  -3.64822   AGTTCTGAGCTTGCC           CGACCCGCG AGGC TGCGCGCCG            TTTCCCTGCAGGACT  54 33
CX034_RS18520 NONE
CX034_RS18525 3819881 .. 3819928 +  -2.7  -3.02511   TGGCGGTGGACAACT CC-TGGATGTTCATCAGCACCGA CGCG TCGCCGCTGACGCACA-CCACGG TCTTGCCGGGATGCG  41 467
CX034_RS18535 3822027 .. 3822043 +  -5.7  -3.28712   GATCGCGCGCCAGCG              CGGCCAG CGG CAGGTCG              TTCTCGGCCAGGCCG  52 137
CX034_RS18545 3823733 .. 3823763 +  -8.9  -3.21063   TGTGCCGGCACTTTC      CCGC-CAGACGGGC GCTC GCGCGCCTGCGCGG       TATTGCGTTTGGCTG  56 299
CX034_RS18550 3824770 .. 3824780 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 270
CX034_RS18560 3825821 .. 3825869 +  -9.7  -3.03159   CGGCGCACGTCCTCT TCGGCG-CGGCC-GCTGCGCGCCAC GTA GTCG-GC-CAGCTGGTCGGCGCCGA TGTTGCCCACGTTGA  59 62
CX034_RS18570 NONE
CX034_RS18575 3832692 .. 3832714 +  -8.4  -4.05714   CGCGGCTGAGCCCGC          GC-CGCCGG CCAGCC CCGGCGTGC           TTTATCATTGGCCCT  72 32
CX034_RS18580 NONE
        thiD 3834476 .. 3834486 +  -3.2  -4.21462   GTTGACTCCCCTATA                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  63 67
CX034_RS18590 NONE
CX034_RS18595 NONE
CX034_RS18600 3836720 .. 3836760 +  -6.8  -3.05268   CGTGAAAAGAAGTCA CCGCGTCGACGCAGC CCAGGGCCGCCA GCAGCG-CGGCGCGG  TCTTGCACCTGATTG  48 246
CX034_RS18610 3838378 .. 3838391 +  -3.7  -2.87132   GCGCCCTGCGACCCG               GGCGC GCCC GCGCA                TCTGTAACAGGGACG  43 97
CX034_RS18615 NONE
CX034_RS18620 3840519 .. 3840550 +  -4.4  -3.72576   CAGGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  55 92
CX034_RS18625 3841930 .. 3841964 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  48 191
CX034_RS18640 NONE
CX034_RS18645 NONE
        fusA NONE
         tuf 3847883 .. 3847908 + -11.1  -4.62203   AGCAGTACCCAACCA         GTGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CX034_RS18660 3848280 .. 3848319 + -20.2  -3.53091   TGTGGCGCAGCTCGT  GAAAAATGGCCGCATTCC CCCG GGAGTGCGGCCATTTTGC   TTTGGCGCGACAGCT 100 63
CX034_RS18665 NONE
CX034_RS18670 NONE
CX034_RS18675 NONE
CX034_RS18680 NONE
CX034_RS18685 NONE
CX034_RS18690 NONE
CX034_RS18695 NONE
CX034_RS18700 NONE
CX034_RS18705 NONE
CX034_RS18710 3853403 .. 3853425 + -17.8  -5.84381   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG 100 70
CX034_RS18730 NONE
CX034_RS18735 3857500 .. 3857511 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAGTT  44 31
CX034_RS18740 NONE
CX034_RS18745 NONE
CX034_RS18750 NONE
CX034_RS18755 NONE
CX034_RS18760 NONE
CX034_RS18765 NONE
CX034_RS18770 NONE
CX034_RS18775 NONE
        secY NONE
CX034_RS18785 NONE
CX034_RS18790 3862596 .. 3862615 +  -2.8  -3.08812   GCGTCAAGGCTAACC            CAGTTAGCG GTA CGC-AACGG            ATTTATTCAAGGAAC  44 28
CX034_RS18795 NONE
CX034_RS18800 3863395 .. 3863410 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  44 3
CX034_RS18805 3864125 .. 3864154 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  78 98
CX034_RS18810 3865263 .. 3865291 + -21.7  -2.84218   CCGTAAGCAGTCAAG        CGCGGTGGGCGCG CCA TGCGCCCGCCGCG        ATGTTTTCATGCATC 100 35
CX034_RS18815 3865828 .. 3865857 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCGCGCG 100 46
CX034_RS18825 NONE
        dsbD 3868690 .. 3868743 +  -3.1  -3.04144   GCTCCTGACGTTGCT TCGTATC-GCCTCGGGCGCGC-CCG AGGCGA TGGCGTGGGCGAGAGGCTGGTACGA TGTTGCCCATACCAG  42 33
CX034_RS18835 3869942 .. 3869952 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGGCGC  52 207
CX034_RS18850 3872405 .. 3872431 +  -6.4  -5.14563   CCGTTGTCTATGAGG         GGGGGGAAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAACGC  90 112
CX034_RS18855 NONE
        ccsB 3875895 .. 3875924 + -22.3  -3.54459   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 44
        cyaY 3878267 .. 3878320 + -17.3  -2.80816   CGACGTCGCTGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCACGCAGCA TATCGTCCATGACGA  78 513
CX034_RS18885 NONE
CX034_RS18890 NONE
CX034_RS18895 3883351 .. 3883406 + -14.6  -5.14965   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCCGGCGGA TTTTTTCGTCCGCGT 100 120
CX034_RS18910 3888460 .. 3888478 +   -16  -3.44848   GCTTCACCCAGTATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  82 142
         ssb 3889108 .. 3889123 + -10.4  -5.78622   CGCTGGATGCGAAAG              CCCTGC CCAG GCAGGG               TTTTTTTTCGCCTGG 100 57
CX034_RS18920 NONE
CX034_RS18925 3891949 .. 3891961 +  -4.8  -3.32844   GGGCTGGGCCGGGCC                GCGA TCGAT TCGC                TTATCCGCTGACCGC  49 2
CX034_RS18930 NONE
CX034_RS18935 NONE
CX034_RS18940 NONE
CX034_RS18945 3894831 .. 3894873 +  -7.4  -2.79796   GCCAGCATATGGGGC ACCTGCACCGCCACGTCGCG CGT CACGCCCAGGCGTTGCAGGG TGTCCTGCAATACGC  49 284
CX034_RS18955 NONE
CX034_RS18960 3898417 .. 3898447 +  -3.2  -2.63301   GGATCTTTCCTGCCA       GCAGTGTGTCTATG TAC TACATTCACACTGC       TACTCTCAGAATGTC  39 137
CX034_RS18965 NONE
CX034_RS18970 3900462 .. 3900485 + -17.4  -3.28712   GCCCCGCAGCGGGGC          GCGGCTGGCC GCAA GGCCGGCCGC           TTGTCGCCCGCACGC  86 59
CX034_RS18975 NONE
CX034_RS18980 3902604 .. 3902627 + -17.4  -3.97331   GACACGATTGTCCTG          CCGGCGGGCG AGGC TGCCCGCCGG           TTCTTTGCCTGGATT  95 44
CX034_RS18985 NONE
CX034_RS18990 NONE
CX034_RS18995 3905801 .. 3905818 +  -9.9  -3.72576   TCATGATTTCCTCTT             TTCGCAC GGAC GTGCGAA              TTTAATCGAAAAAAA  71 284
CX034_RS19040 3914369 .. 3914384 +  -4.6  -2.53382   CCGCCGATTGACAAG              CCTGGC CGGC GCTGGG               TAGATTGCGCCTACT  42 30
CX034_RS19045 3915493 .. 3915531 + -10.9  -3.73224   AGCGGGCGCATACCT  CGCTTGAAGGCGGCGGCC GCAT GGCCGCCGTCG-CAGGGG   TTTCGTACCCCATCG  73 39
CX034_RS19080 3920435 .. 3920454 +  -4.8  -3.35679   CCTGGCCGAAGGAGC            GGCCTGAG GCGC CGCCGGCC             TTCTCCATCCACGAA  51 19
CX034_RS19090 NONE
CX034_RS19095 3923594 .. 3923633 + -13.5  -2.78715   ACTGAGGCTGCGCGA TCGCCC-GC-CCGCCGCGC GTGC GCGCGGCGCCGCTGGGCGC  TATAATGCGCAACTT  67 36
CX034_RS19100 3924207 .. 3924234 +  -8.4  -3.06831   AGACCTCCTCGAGTG        GCGCCG-TGGTGT CGA ACGCCATCCGCGC        TTGCGTGAACGTTGA  55 477
CX034_RS19115 3926207 .. 3926238 +   -13  -2.89668   CATCCCCGACCAGCT      GACCGACTGAGCGC CGGC GCGCTCAGTCCATC       TGTATCCCGCTCTTG  69 16
CX034_RS19170 3937902 .. 3937914 +  -5.5  -3.55622   ACCTCGCGGTGCACC                GCGTC CTC GATGC                TTTCGCCGACTTCGA  54 315
CX034_RS19195 3942802 .. 3942814 +  -6.9   -3.7456   GCCCGAGAACGTGGC                CGGCG GCT TGCCG                TATTTCTTGGTGTAG  61 272
CX034_RS19240 3952177 .. 3952192 + -10.4  -2.57132   TCGCCGGCAGCAAAC              TGCCGC TGGC GCGGCA               ATTCTAGGCGGCGGG  57 3
CX034_RS19245 3953241 .. 3953251 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS19250 3954435 .. 3954454 +  -5.6  -3.90112   CACGGCGCACAGGAC            GCCGCGGCC GTC GGCCA-GGC            TTTCCTTCAGGCCGC  60 205
CX034_RS19285 3961691 .. 3961714 +  -9.4   -3.1372   AGGCCTTGATGTCGT          GCGCCAGCGC TTCG GCGCCGGCGG           TATTGGTGGCCAGTA  59 220
CX034_RS19315 3965942 .. 3965959 + -12.7  -3.21218   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  69 86
CX034_RS19345 3971397 .. 3971439 +   -14  -3.23853   CGCCGGCGCCGAATC CTCCGAGGCCGTGCTGGCGG CGG CCGCCGCCGCGGCTTGCGAG TATTGCTTCCACACC  75 147
CX034_RS19355 3975284 .. 3975331 +  -6.1  -4.63218   GCGGTCTGTCTTGCA TGCGCGG-GCGCCG-CGTACGGC GTCA GGCGGGGGTCAGCGCACCGCGCA TTTTCTTCAGCGCCG  78 397
CX034_RS19380 3980020 .. 3980049 +   -15  -4.25104   CGGGGCGTTGCATGC       TGCCCACCCGGC CCCTGT GCCGCGTGGGCA        TTTTGCTGCGCCCGC  95 55
CX034_RS19385 NONE
CX034_RS19390 3986625 .. 3986637 +  -9.1  -3.18264   GCCTGTCCCCGCGGG                GACGG ATA CCGTC                TTAGTACGTACGGCA  59 101
CX034_RS19395 3987459 .. 3987473 +  -7.8  -3.28712   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTGAGGCGCCCGC  56 5
CX034_RS19400 NONE
CX034_RS19405 NONE
        mlaE NONE
        mlaD NONE
CX034_RS19420 3991747 .. 3991765 +  -5.2  -4.72386   GGCCACCGCCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  81 45
CX034_RS19425 3992544 .. 3992555 +  -5.8  -4.07568   AGCCGCGCCGGCGCG                GCTG GAAG CAGC                 TTTTCGGCCAGCCGG  64 185
CX034_RS19435 NONE
CX034_RS19440 NONE
        murA NONE
CX034_RS19450 3996307 .. 3996328 + -18.7  -2.61274   CATCGCCTGAACCCC           GCCGCCCGC GCCG GCGGGCGGC            CTTCCTTGCAGTACC  87 31
        hisD NONE
CX034_RS19460 NONE
        hisB 3999317 .. 3999331 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCG  42 3
        hisH 4000062 .. 4000074 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  57 39
CX034_RS19475 NONE
        hisF NONE
        hisI NONE
CX034_RS19490 NONE
CX034_RS19495 4002768 .. 4002783 +  -2.4  -2.90496   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAATTTCGGAGAACC  40 7
        tatA 4003040 .. 4003065 + -12.6    -3.889   CCTAGTCCCGGCCCG         GGACCGGC-CC ATGAC GGCGCCGGTCC         TTTCCTATCGTTCCA  81 36
        tatB NONE
        tatC 4004382 .. 4004407 +  -5.3  -2.52676   AAGTAGACGGTTTCA         CGCTTGCCGCGG CCG CC-CGGCATGCC         TACATTGCCGGCATG  44 65
CX034_RS19515 4004923 .. 4004937 +  -4.2  -2.82327   TTCGCATACCAAATC               CTTGCC GGC GCCAAG               ATTTCAGTATGAGAA  43 43
CX034_RS19520 4006146 .. 4006189 + -11.6  -2.52516   CCGTCCGGCCGGCAC CATCCCGCATACGTGTTGGC AACC GCCAACGCGCATGCGTGCAG ATTCGTCGTACAAAA  61 67
CX034_RS19525 NONE
CX034_RS19530 NONE
CX034_RS19535 NONE
CX034_RS19540 4008729 .. 4008739 +  -3.2  -3.63968   ATATTGCGAATGAAC                 CCTT CCG GAGG                 TTTCGACGTTTCCGC  53 28
CX034_RS19545 4009488 .. 4009506 +    -3  -3.09785   CGGCAGCGTCGATAT             GTTGAGCC GCC GGCTCGGA             TCTGTTCGCCTGTCC  44 21
CX034_RS19550 NONE
CX034_RS19555 NONE
CX034_RS19560 NONE
CX034_RS19565 NONE
CX034_RS19570 NONE
CX034_RS19575 NONE
       virB9 NONE
CX034_RS19585 NONE
      virB11 4017871 .. 4017881 +  -2.4  -4.29396   ACGCCTGCCGCCTGC                 ACGC ATT GCGA                 TTTTCGTGCATAATT  62 40
CX034_RS19595 4018000 .. 4018021 + -15.9   -4.7497   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC 100 37
CX034_RS19605 NONE
CX034_RS19610 NONE
CX034_RS19615 NONE
CX034_RS19620 4023391 .. 4023423 +  -5.4  -3.02043   ATGTGCCTGCTTGCT      TTGCGCACCGGCGT CCATC GCGCCGCGCCGCAA      TCTTCCCACCGCCTT  47 209
CX034_RS19625 NONE
CX034_RS19630 NONE
CX034_RS19635 4027182 .. 4027215 +  -5.2  -3.71873   CGCATCGAATTCCCG    AGCCGGCG-CGG-CAC GCTG GTGGCCGTCGACGGCG     TTTCGCTGTCGCTGG  57 75
        argJ NONE
CX034_RS19655 NONE
CX034_RS19660 4031886 .. 4031905 +    -2  -2.89475   GGATCCGCGGGCTGC            TCTGACGC AACG GCGCTAGG             TGTGATGTCTCAATA  40 21
CX034_RS19665 4032976 .. 4032986 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS19670 4034025 .. 4034035 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 60
CX034_RS19680 4035213 .. 4035234 +  -3.7  -2.70932   CGCCACGCTCAGGTA           GT-CGATCAG CCC CTGCTCGTAC           TGGTTGCGCGCCAGG  40 199
CX034_RS19720 NONE
CX034_RS19745 NONE
        glpK 4053094 .. 4053130 +  -2.2  -3.53811   CACGCCGGCGCGCCG   GCCGCGGGGCTG-GCC AGCTGGC GGCGCAGCACCA-GGC   TTTGCGCGCCATGCA  50 138
CX034_RS19785 4059812 .. 4059828 +  -2.2  -2.70932   CACGACACGCACGGA              GGCC AAGCATGAA GGCC              TGGTTGCGACAACAC  38 14
CX034_RS19790 4060719 .. 4060732 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4061842 .. 4061887 +  -6.2  -3.18264   CGGCGTGCTCCAGGT TGCCGCGGTTCAGCTTGGGC AGGATCGC GCCCA-GCTGC-TCGCGGTA TTGCTCGATCAGCGC  51 280
        mutY 4066585 .. 4066595 +  -3.2  -3.28924   CCAGCCTGAAGGTGA                 TCTG CTG CAGG                 TTCTGCCGCCCGCTG  47 95
CX034_RS19815 4068317 .. 4068327 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  58 144
CX034_RS19820 NONE
CX034_RS19825 NONE
CX034_RS19830 NONE
CX034_RS19835 NONE
CX034_RS19840 NONE
CX034_RS19845 NONE
CX034_RS19850 4075445 .. 4075464 + -16.4  -6.06723   GGCCGAGCGTGCACG            CCGCCCCG CAAC CGGGGCGG             TTTTTTTTTCGCGCG 100 57
CX034_RS19860 NONE
CX034_RS19865 4078165 .. 4078190 +  -5.9  -3.61652   GACGGAAAGGCGATG         CCGGCGTCCGG CTGG CCCGCCGCCGA          TTGATTGTTTACGCA  56 53
CX034_RS19870 4079641 .. 4079661 +  -2.4  -2.78712   AGACCAAGCCCTATC            CCAGCGAG CCATT CACGCTGA            TCGTTCCGTTCGGCG  38 209
CX034_RS19885 4082624 .. 4082643 +  -2.8  -4.07568   GCACCGTCACGCGCT            CCAGCGTGT CGA ACAC-CAGG            TTTTCCACAGCCAGG  58 124
        mnmE 4095058 .. 4095076 +  -6.7  -2.62184   CCGCGCCGGCGATGC            GGCC-CAC GATC GTGCGGCC             TGCTATCGCGCAGCC  47 398
CX034_RS19950 4097166 .. 4097179 +  -2.3  -3.29947   AAACCCGCCATCGCA               CGCTG AAGA CGGTG                TTGCTGTGGTGGCTG  44 49
CX034_RS19955 4098641 .. 4098655 +  -5.7  -3.06183   TCATCCGTTGGCCTG               CGATC TGCGC GATCG               TTCCATGGCCATCCA  47 74
CX034_RS19960 4099724 .. 4099756 + -18.4  -3.02144   AAGAAGTAAACCGAT     CGCGCGGCCGGCGGC ATGC GCCGCCG-CCGCGCA      TCTTCCCAACGGTGC  90 32
CX034_RS19965 NONE
CX034_RS19970 4101800 .. 4101821 + -15.9  -5.06414   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 46
CX034_RS19980 4103630 .. 4103641 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CX034_RS19975 4101800 .. 4101821 - -15.9  -4.65895   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 59
CX034_RS19945 4094338 .. 4094352 -  -5.7  -4.15788   AACGTCTTCAACAAA               GTCGA TCTGC TCGAC               GCGGCGTTCCAGGGC  69 303
CX034_RS19935 NONE
CX034_RS19930 NONE
CX034_RS19925 NONE
CX034_RS19920 NONE
CX034_RS19915 4087665 .. 4087677 - -10.5  -2.78384   GTTTCTTTTAGCACA                GCGCG CGG CGCGC                TCAGGCCTGCTGCGC  57 26
CX034_RS19910 4086296 .. 4086316 -    -9  -3.12999   GCATGGGACATGGAA            CCGCTCCT TGTTC AGGAGCGA            TCCATTATGAAAACG  59 130
CX034_RS19905 4085375 .. 4085385 -  -8.2  -2.57344   GACGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTGCG  52 8
CX034_RS19900 4084267 .. 4084280 -  -2.4  -2.86676   CCGAGGAATCGAAAC               GATG CGCGCC CATC                TCAGCTTCCCTGCGC  40 26
CX034_RS19895 NONE
CX034_RS19890 4082548 .. 4082577 - -22.9  -3.48593   GACGCCGCGACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       GGCGGCATTCAGCGC 100 34
CX034_RS19880 4079762 .. 4079794 - -10.6  -4.17762   GATCGTGGAAAACAA     GGCTG-GCGCCAATG GCAT CATCGGCGCGCAGCA      TGCGAAGAAGGCGAC  89 235
CX034_RS19855 4075061 .. 4075073 -  -9.1  -3.01791   ACGGCGTCCTGAACA                TCGCC CGC GGCGA                CCGGGTCCGGATGAA  55 446
CX034_RS19810 4066142 .. 4066172 -  -5.2  -2.52896   CCATCCCCGAACGCA       GCACGGCCATGCTG GTG CTGCACGGCCCCGA       CGGCATCCTGCTGCA  42 379
CX034_RS19780 4057713 .. 4057730 -  -2.5     -2.97   AAATCAATCTACAGA             GTCGGAC GTTC GGCCGGC              GCGGACGCGCCGGCC  41 112
CX034_RS19775 NONE
CX034_RS19770 NONE
CX034_RS19765 4054568 .. 4054602 -  -2.7  -3.53811   GCGATCCGCCGGAAA    GCCCGGCGCCAGCG CCGTTTCC CGCCGCC-CCGGCC     CGCCGCCTCAGTGCA  49 33
CX034_RS19760 NONE
CX034_RS19755 4052654 .. 4052667 -  -8.1  -3.14132   GCTGTCGTGCATGAA               TGCCG ACAG CGGCA                TCCCGCTGTCCGAGC  53 358
CX034_RS19740 4049681 .. 4049708 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  43 42
CX034_RS19735 NONE
CX034_RS19730 4047889 .. 4047904 -  -7.6  -2.57132   GCCTGCGCCGAGAAG              CTGTCA AATT TGACAG               GATCTGCCGCGGCCG  50 45
CX034_RS19725 4047206 .. 4047256 -   -11  -2.50935   ACGCCACCCAGGAAC GCCCGCCCCGCGTGCTGCTGCT CGACGGC AGCGGCAACATGCGCGCCGAGC TGGTCATGACCGCCA  58 248
CX034_RS19715 NONE
CX034_RS19710 NONE
        zapD 4044000 .. 4044014 -  -5.6  -3.55071   CCAGACCGGCCCAAA               CTGGCA GTT TGCCGG               GCGCTGCTGAAATAG  54 137
        mdtA 4042681 .. 4042710 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  52 10
        mdtB 4039617 .. 4039639 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  42 16
CX034_RS19690 NONE
CX034_RS19685 4034836 .. 4034870 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS19645 4027379 .. 4027408 -  -9.9  -3.16191   CGACACCTTGAGCAA       CGCCGAGCAGCGCA AGG TGCGCGGC-CGCCG       CATCGGCATGATCTT  62 140
CX034_RS19600 4018000 .. 4018021 - -15.9  -3.91144   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC  91 66
CX034_RS19375 NONE
        fghA 3977067 .. 3977098 -  -4.3  -4.08706   CGCCCAGTATATAAA      GCGGCCCGGGC CCGGCCTGTT ACCCCAGCCGC       TCGACGTGAAACCGG  62 13
CX034_RS19365 3976289 .. 3976308 -    -2  -3.53012   CTGCGCCGCGCCAAA            GTTCCGGA ATTT CCCAGTAC             GCAGGATATTTTTCT  48 54
        rpoH 3975257 .. 3975276 - -13.6  -5.40474   AGGCCCCCAAAAAAA            CAGACCGC CGTA GCGGTCTG             TCTTGCATGCGCGGG 100 55
CX034_RS19350 3970962 .. 3970977 -  -8.2  -3.66666   GCGAAAACCTGGAAA              CCGCGC TGGT GCGCGA               ATGCGGCGAAGAAGC  63 427
        coxB 3969001 .. 3969033 - -13.4  -3.22858   CCAACTACAGGAACA     GCAGCGG-GGCGCGC TTCA GCGCGCCTCCACCAC      GTCCTTGGGTTGGAC  73 8
        ctaD NONE
CX034_RS19330 NONE
CX034_RS19325 NONE
CX034_RS19320 3965942 .. 3965959 - -12.7  -3.33696   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  71 57
CX034_RS19310 NONE
CX034_RS19305 NONE
CX034_RS19300 NONE
CX034_RS19295 NONE
CX034_RS19290 3961530 .. 3961556 -  -8.7  -2.87132   TTGGGCGTCCACAGA         TATCGGCCCCC CATGC GGGGACAGATA         CCGTCTTGGCAGTCA  54 137
CX034_RS19280 3960402 .. 3960417 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CX034_RS19275 3959545 .. 3959574 -  -2.6  -3.31322   GCGAAGGTTCGATAA       GCGCGACGATTC CAGGGC GTGCCGGCGCGC        TACGGCTTGTCCGCC  44 25
        glmU NONE
CX034_RS19265 3956651 .. 3956682 - -10.8  -3.04322   TGCAACCTCGCAATA      CGCGGCGTCAGCGGA CCA TCCGCCG-CACTGCG      GGCATTATAGAAGTA  62 87
CX034_RS19260 NONE
CX034_RS19255 3954052 .. 3954086 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS19235 3950467 .. 3950477 -  -8.2  -5.15634   CACTCTAGGAAAAAA                 GCGC GGC GCGC                 GAAAATAATTAAAAC  95 203
CX034_RS19230 3949026 .. 3949057 -  -8.6  -2.56596   TGGGTGACGAAGGGA      TGCGAGGGCCG-CCG TGG CGGCCGGCCCTCATT      CGGAGGTGGCGGTGC  52 21
CX034_RS19225 NONE
CX034_RS19220 NONE
CX034_RS19215 NONE
CX034_RS19210 NONE
CX034_RS19205 NONE
CX034_RS19200 3942191 .. 3942205 - -11.4  -3.90112   TGGCGGCCAAGGAAA               CGCTGG CCA CCAGCG               ACCTCAACACCGAGC  77 391
CX034_RS19190 NONE
CX034_RS19185 NONE
CX034_RS19180 3938404 .. 3938415 -  -2.2  -3.18389   GGAAGATGAAAATCA                CGAA ACAC CTCG                 TTCATGCAGGCCCGG  42 95
CX034_RS19175 3937521 .. 3937566 - -14.5  -3.70902   CGCGCGAGACCGAAA GCCCGGGTTTCCGGCAGCGCG TCGC CACGCAGCTGGCCACCCAGGC CACCCAGGCCATCCA  88 96
CX034_RS19165 NONE
CX034_RS19160 NONE
CX034_RS19155 NONE
CX034_RS19150 3932251 .. 3932264 -  -5.2  -3.10611   TTTACCCGAAGAAAC               GGGC CAGCAC GCCC                TGCCGCGGATGTCGG  49 382
CX034_RS19145 NONE
CX034_RS19140 NONE
CX034_RS19135 NONE
CX034_RS19130 3928490 .. 3928500 -  -8.2  -2.70932   CTCTGTCTGCAATGA                 GGGG GCG CCCC                 GGGTTCAGCGCCCGT  52 30
CX034_RS19125 3927249 .. 3927264 -    -6  -2.55606   CTATATAGGATGAAT              GGGGTG CCTG CCCCCC               TGGGGACAGATACCG  46 163
CX034_RS19120 3926083 .. 3926099 - -10.8  -3.19602   CGGGCTACACCAAGA              CGCCGC CCTAC GCGGCG              GGCATCGCCCTGCAG  64 155
CX034_RS19110 3923812 .. 3923824 -  -3.3  -3.60475   AAGTGTGATCCGAAA                GCGGA CCG CCCAC                TTTGGTTGGGTCGGT  49 498
        trmB NONE
         pip NONE
        thiS NONE
        lysM NONE
CX034_RS19055 3916375 .. 3916388 -  -5.9  -2.87931   GCCAGGTGCGACAGA               CCGGC GCGG GCCAG                GACGCGGCTGACGGT  48 330
CX034_RS19035 3912492 .. 3912511 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TTGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CX034_RS19030 3911429 .. 3911443 -  -2.8  -3.01924   GATTCGCCCGCAAGA               TCCC ACCAATG GGGA               GTTGGGAACGCGTCT  42 101
CX034_RS19025 3911010 .. 3911042 - -18.5  -5.81412   CGGAGGCAAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTACGGCTGCG 100 63
CX034_RS19020 3909290 .. 3909318 -  -7.4  -3.53012   GCGCGCTGCTCGAAA       GCGAATCGGC-CC GGCT GGCGGCGATCCGC        GGCACGGACGCCGAC  60 434
CX034_RS19010 3906512 .. 3906535 -   -21  -2.71364   GCAGCCCGGCAAGCA          GGCGCCCGCC GGCA GGCGGGCGCC           TGGCGGCGTCAGCGC 100 34
CX034_RS19005 3905834 .. 3905850 - -15.1  -5.53288   TTTAATCGAAAAAAA              CCGGCGC CCG GCGCCGG              ACCATGACTGCGTTC 100 39
CX034_RS19000 3905551 .. 3905588 - -16.9  -2.65174   AAAATAAGTAATCTA   CCCGGGAGCCTGTCCCC GCAT GGGGACTGGCTCCCGCC    AACTTCAGCCGTCAG  80 104
CX034_RS18950 3894163 .. 3894189 -  -9.2  -2.52516   CGCGGCACGACGAAG         CCGCCGCCACGC TAG GCCAGGCGCCGG         GGGCGCAGCTGTATC  51 513
        uvrA 3884108 .. 3884142 -  -2.8  -3.01712   GGCCTGGCGGCAAGA    TAGGGGGG--CGGGCG GTTCG CGTCCGTGCCGCCCTA    GTCTAGCGCCGTTTG  42 28
CX034_RS18900 3883249 .. 3883272 -  -8.9  -3.53012   GGCGGCTGTTCGAAA          TGGGCTGAGG GGCTG CCTC-GCCCA          TGCGGCCTACCCCAA  62 183
CX034_RS18880 3877505 .. 3877530 -  -2.4  -3.70149   TCGACAGTATCGAAA         GCCAGGCGGAC GATTG GGCCGCA-GGC         CTGGATGTCGATATC  53 331
CX034_RS18870 NONE
        lysA 3875895 .. 3875924 - -22.3  -3.53012   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 48
CX034_RS18845 NONE
        hemB NONE
CX034_RS18820 3865262 .. 3865292 - -15.3  -3.13164   CCCGTAAGCAGTCAA       GCGCGGTGGGCGC GCCAT GCGCCCGCCGCGA       TGTTTTCATGCATCG  78 453
CX034_RS18720 3854430 .. 3854450 - -15.4  -4.72272   GCCGGCCATGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCCTGAGCCCGG 100 50
CX034_RS18715 3853403 .. 3853425 - -17.8  -3.72576   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTGTTCATCG  93 125
CX034_RS18630 3841740 .. 3841761 - -15.1  -3.14132   TCTGTTCTTCACCAA           GGCCACGCC TTCG GGCGCGGCC            TAGCTGTGAACTGTC  76 25
CX034_RS18605 3836157 .. 3836188 -  -2.2  -4.68103   CCAACTGGAACAAAA     GGC-CCGCCACGAC TTCGAG GACGC-GCGGCGCC      AGGCCGTGCAATCGG  76 357
CX034_RS18565 3825581 .. 3825615 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS18540 3821878 .. 3821927 -  -7.9  -3.91084   GCAGCCTGAAGGAAA CCCGGCTGCCGC-TCACGCC-GCC GCCCG AGCAGGCATGACGCCGC-GCCAGG CCGTTCAGGTCAGCA  68 30
        ilvB 3819387 .. 3819426 -  -4.9  -3.76224   TGGCCAGCGACGAAA CCGCC-TTCATCACC-GGC GCCT GCCTGGAGGTGGATGGCGG  CCGCTGCGTGTAGGC  58 94
CX034_RS18490 3807796 .. 3807849 -  -9.4  -3.25823   CTGGGGCCACAGCAA CAGGACGT-GGCGGCCGCGGTCGGCG ATTT CGCCCTGCGCCGC-GCCGACGGCCTG TGGGCCTACCAATTG  61 390
CX034_RS18460 3799295 .. 3799322 -  -8.4  -3.25823   CCTGCCGCACATCAA        GACCGGCAA-GGC CGT GCCGCTGGCGGTC        ACCACCGCCGGCCGG  59 351
CX034_RS18450 3797246 .. 3797267 -  -4.3  -3.05596   GACGCCGGGACGGAA           GTCCTGCAT CGCC ATGCCGGCC            CCGTCCTTACTTGCG  45 32
CX034_RS18445 3796988 .. 3797012 - -17.1  -3.20991   TCGAAGTGAAGTGAA          TGACGCCGGGC GCG GCCCGGCGTCG          GGTCAGCCTTGCTCC  84 28
CX034_RS18415 3788134 .. 3788178 -    -2  -3.17723   GTATTTCGAAGGCAA GCTCAAGCGCCGCACCGATGCC GAC GGCATCG-TGCGTTTCCAG-GC GGCGTAGCGGGCGCG  42 56
CX034_RS18405 3786587 .. 3786612 - -13.5  -3.38522   GATGCAGTGCAAATA         TTACGTTTACG TAAA CGTAAACGTAA          AGTTGAGTCGGGTTT  75 91
CX034_RS18360 3777662 .. 3777683 - -11.5  -3.57144   CGTCGTATGCCGAAA           GGGGCTGCC GTGA GGCAGCCTC            TTTTGCTTGGGGGCG  72 95
        rpmH 3772030 .. 3772046 -  -2.1  -2.78384   TCCGCCTGGATTAGA              CGGCCAG ACG CTTGCGG              CCCTTGGCGCGGCGG  38 4
CX034_RS18335 3771529 .. 3771573 -  -2.8  -4.12902   GAAGTACCGGTAAAA CCGGATCGGGGCGATAAGCAG TCTC CTGATCATCGCGCT-ATCCGT GTGAAGTGAGCATCT  59 10
        yidD NONE
        yidC 3769512 .. 3769531 - -16.4  -5.55664   CCAGGACGAAAAAAA            CGGCGCCC CGCA GGGCGCCG             TTTCGTGGCTGGCTC 100 43
CX034_RS18310 3766950 .. 3766995 - -14.8  -2.78384   CGGCGCCGCAGGACA CGGCCG-AGGTCGCCGGCCGCAA GGC CTGAGGCCGGC--CCTACGGCCG GGCCGTGTCGCTCTG  72 17
CX034_RS18300 3764299 .. 3764325 -  -7.1  -2.82516   CCCTGTACGACCAGA         GCGCGCCGGCC GACGA GGCCGAGGCGT         TCCGGCGCAGCGGCT  50 68
CX034_RS18290 3761492 .. 3761524 -  -3.3  -3.28791   ATGTGCGGCCCACAA     GTACGGCGGGATTG AGGCCG CCA-CCCGCCGCGC      CATCGTCCGTGCCGC  47 393
CX034_RS18200 3751872 .. 3751887 -  -8.2  -3.09273   GCGCGCCAATAGATA              GGCCAC CACA GCGGCC               CCCACCAGGATCAGG  56 199
CX034_RS18195 3750886 .. 3750910 -   -15   -4.2828   GTCCACCCATGAAAA         CCCCGCCAGGC CTGC GCC-GGCGGGG          TTTTTCACAAGGGTG  95 52
CX034_RS18170 3747282 .. 3747297 -    -6  -3.15579   CCAACGCCCCAGCAA              GCGGCG TGCC CGACGC               TCGCGGAAGATCCGC  51 71
CX034_RS18165 NONE
CX034_RS18160 3746828 .. 3746844 -  -3.5  -5.00616   TTGCGTTTGAAAAAA              TCGCCTG CGC CCGGCGC              GATGCCGGACAGCGT  81 127
CX034_RS18155 3739557 .. 3739593 - -11.3  -3.09785   GCATACGCCAATATA    GCCGCAATGCCGGCCGC CGA GCGGCCGGCCCGGCCCC    CGGTCAATACGCCAC  64 29
CX034_RS18150 3738856 .. 3738871 - -11.8  -5.10461   CGCACGCAAGAAAAA              CGGCCC GCAA GGGCCG               TCTCAAAACGTGGGC 100 118
CX034_RS18145 NONE
CX034_RS18140 NONE
CX034_RS18135 NONE
CX034_RS18130 NONE
CX034_RS18125 NONE
CX034_RS18120 3732742 .. 3732758 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CX034_RS18100 NONE
CX034_RS18095 3728801 .. 3728819 - -10.3  -3.07222   AGGAGCACCTGAAGA             TCCTCGC GGCCT GCGAGGA             AGGCAATGCCGCGCG  59 110
CX034_RS18075 NONE
        rimO 3723412 .. 3723431 - -11.4  -3.28712   TTGGCTGCGCTACAA            GCGCCACG CCTT CATGGCGC             GCGGCTTGAGCGCCG  66 434
CX034_RS18060 NONE
CX034_RS18055 NONE
CX034_RS18050 NONE
CX034_RS18045 3720470 .. 3720490 - -11.8  -3.36492   GCTGGAATTGCAGAA            GGCCGGCG GCAAG CGCCAGCC            GGTGGACGTCTTCGT  66 82
CX034_RS18015 NONE
        dprA NONE
CX034_RS18005 3713616 .. 3713644 -  -4.3  -3.20723   TGTTCATGAATGGAA        CGGGCGATGCGGC GAG GCCGCGTAGCATG        AGGAGGGCGTATGGG  47 131
CX034_RS18000 3712883 .. 3712919 -  -2.2  -4.28254   GCTCAAGAGCGAAAA   CCCCAACGT-GCGCCGCA TCC TG-GGCGTGACGCCGGGC   GCCGGCGCCAACCTG  65 237
CX034_RS17980 3708336 .. 3708361 - -10.3  -3.35679   CGTCGTCACCGAGAA         CGGCGTGGCGC AGAT GCGCCAGGTCG          ACGGCGTGGCCGTGC  63 290
CX034_RS17965 3706128 .. 3706162 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS17935 3702326 .. 3702340 -  -8.5  -3.14132   CCTGCGCTGGATCAA               CCGCC TGTGC GGCGG               CATGCTGGTCGTGCT  56 123
        rsmB NONE
CX034_RS17920 NONE
CX034_RS17915 NONE
CX034_RS17910 NONE
        trkA NONE
CX034_RS17900 3693764 .. 3693790 - -11.4  -2.70232   CTGAATAGTACACCA         CCGCGCGGGCAG CGG CCGCGCGCGCCG         CTATTTGCGCCAGAA  62 26
CX034_RS17895 3692851 .. 3692865 -  -5.6  -2.57244   GCACCGACGAACGCA               CCGCCA TCG TGGCGC               TGACCCACGATCCCA  44 338
CX034_RS17885 NONE
CX034_RS17880 3690216 .. 3690251 -  -2.3  -3.54424   CGGGACGCGCCGAAA    CCCTTGCCATGCGGG ACTTTA CGCGCCCGGCCAGCG     ACCCGCGGCAGTCCG  48 167
CX034_RS17875 NONE
CX034_RS17870 3688046 .. 3688092 -  -8.6  -3.53224   CAGCGCGCGCGCAAA CGCCAGCAGGTCCTCGGCCTG CACATC CAGGCCATAGTCCAGCTG-CG GCCCCGACTGCGACA  62 262
CX034_RS17860 NONE
CX034_RS17855 3685534 .. 3685545 -  -7.2  -3.68351   GCGTCACCAGCGAAA                CGCC AGAC GGCG                 AGATCGCCGCATCCA  64 278
CX034_RS17830 NONE
CX034_RS17825 NONE
CX034_RS17820 NONE
CX034_RS17815 NONE
CX034_RS17810 NONE
CX034_RS17805 NONE
CX034_RS17800 NONE
CX034_RS17795 NONE
CX034_RS17790 3671325 .. 3671344 - -13.6  -4.52589   TTCCCTTAGATAAAA            CGGGCGTT ACCA AACGCCCG             GCAGGTAACCACTAT 100 37
CX034_RS17785 3669652 .. 3669666 - -11.4  -3.09635   AGCCTGAGCATCGAA               GTGGCC TAC GGCCAC               GCCTGGCGGGCGCCG  62 125
CX034_RS17775 NONE
CX034_RS17770 3667041 .. 3667062 - -10.1  -3.05384   GCTTTCCGCAGGTAA           TCACCGCCA TCAT CGGCGGCGA            CGTGCACGCCGGTTT  59 423
CX034_RS17740 NONE
CX034_RS17735 NONE
CX034_RS17730 NONE
CX034_RS17725 3659084 .. 3659118 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS17710 3657149 .. 3657185 - -23.8  -2.71693   GAGGAAGGAAAGTCA    GCGGGTGCCTGTCCCC CGTGC GGGGACAGGCACCCGG    GTGGGGGGTTTACAT 100 35
CX034_RS17695 NONE
CX034_RS17690 3652457 .. 3652488 -   -15  -2.60075   GCGGGTCGAATGAAG      GCAGCCGCGCCGCC CGAG GGCGGCGCGTTCGC       ATGAGGACGAGGCCC  71 45
CX034_RS17605 NONE
CX034_RS17600 NONE
CX034_RS17595 NONE
CX034_RS17590 NONE
CX034_RS17585 NONE
CX034_RS17580 NONE
CX034_RS17575 NONE
CX034_RS17570 NONE
CX034_RS17565 3625072 .. 3625100 -  -3.7  -3.31726   GGTCGCCACAGAATA       CCTGCGCGCTGG TCCAGG CCGGCGC-CGGG        GTGGCGCTGGTGGAC  47 199
CX034_RS17555 3623188 .. 3623198 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS17550 3622116 .. 3622144 - -10.3  -2.57026   TAGAGTGACACCAAT       GC-GCCGGCACGG CAAGC CCG-GCCGGCCGC       TTTCCCCCATCCAGA  57 65
CX034_RS17515 3615636 .. 3615680 -    -4  -2.87132   GGGTCGGCCGATACA TCGCAGGTA-TTGCCGCCGCG CGGC CGCGGCGTCATCCGCCGGCGG CCCCCGCGCCACGCC  43 12
CX034_RS17510 NONE
CX034_RS17505 NONE
CX034_RS17500 3612298 .. 3612343 -  -8.9  -3.32769   GGCCGAAACCATCAA GGTCGGCATCGCCCTGGCCGTG CAT CCCGAC-AACGCCACGCCGACC ACCGCCAACTTCGTC  59 105
CX034_RS17490 NONE
CX034_RS17485 3609049 .. 3609071 - -10.4  -4.69622   AGACAAGGGGAAAAA           TCGCTGCGCC GGC GGCGCGGCGT           GCGGACGACGCTAGG  93 36
CX034_RS17480 3607600 .. 3607615 -  -2.6  -4.08216   GTATTGCGTGGAAAA              CATG-AG CTA CTACATG              GTGTCGCGCTTCCTG  58 233
CX034_RS17445 3601655 .. 3601670 -    -6   -3.5774   ATCGAATCGTGGAAA              CCGCTG TTCG CCGCGG               CGCTTTGAGCGGTAA  56 63
CX034_RS17415 3592335 .. 3592356 -  -5.7  -3.30771   GCACATTCCGTACAA           GGGCAGCGC CGCG GCGCTTACC            GATGTCCTGAGCGGG  51 409
CX034_RS17390 3588869 .. 3588898 -  -7.7  -3.14132   GCCGGGGTGTACGAA       GAGCTGCTGGGCG TGTG CGGCGAGCGGCTC        GCGGCGCTCAGGCAG  54 33
CX034_RS17380 NONE
CX034_RS17375 3586511 .. 3586531 -  -3.1  -2.77192   AAGGCCGGCAAGAAC            GATCTGCAG CAG CCGCTGCTC            TATGGCTCGGTGCTG  39 97
CX034_RS17350 3579510 .. 3579536 - -23.8  -4.79223   GCACAGCAGGAAAAA         GCGGGTTGCGGC GCT GCCGCAACCCGC         TTTGTGCGTCAGTGA 100 34
CX034_RS17305 NONE
CX034_RS17300 3567939 .. 3567976 -  -8.3  -3.28924   CATGGCTGTCTACAA   CGGCGTGGCCTACCTGG CCGG CCAGGTACCCGACGACG    CCTCGCTGGACATGG  59 441
CX034_RS17285 NONE
CX034_RS17280 3565283 .. 3565326 -  -3.1  -4.58685   AAATGTTGTGAAAAA GCGA-CCCCCTCATGGC-GGA TTCC CCCTGCCATAGGGGGGATTAC CAGTAGTTTTCGACC  71 22
        phaZ 3563913 .. 3563928 - -11.8   -4.2687   CGTAAAAAGCAGAAA              CGGGCC AGGC GGCCCG               TTGCAGGGAGCGCGC  91 48
        rsxB NONE
         nth 3562525 .. 3562539 -  -3.4  -3.88985   AAAACGCTTCAGAAA               CCAGGG TTT CCACGG               TGTTTCCCACGATGT  56 108
CX034_RS17260 NONE
CX034_RS17255 NONE
CX034_RS17250 3559586 .. 3559596 -  -8.2  -2.52516   TGCCGGATGAGCAAG                 GCCG TGT CGGC                 TTCCTTCAGGAGGTT  51 39
CX034_RS17245 NONE
CX034_RS17240 NONE
CX034_RS17235 NONE
CX034_RS17230 3555647 .. 3555681 - -30.1  -3.09516   GCGCCCAGGACTGAA     CGCTGGCGGCGCGGC CTGGC GCCGCGCCGCCAGCG     TGCGCGCGGGTCAGC 100 36
        msrB NONE
CX034_RS17190 NONE
CX034_RS17185 NONE
CX034_RS17180 3547208 .. 3547237 - -19.5  -4.13767   CCCGGCAGCCGAAAA       CAAAATTGCCCGC GAAA GCGGGCAATTTTG        TTGATGGCGATGGCT 100 47
        lplT 3538600 .. 3538628 -  -6.5  -3.74747   CCAAGCCCGAGGAAA        TCGCCGCCTGCAG TCC CTACCTGCGGCGC        CAGATTGCCCTGCTG  61 278
        ompR NONE
CX034_RS17140 NONE
CX034_RS17135 3534415 .. 3534425 -  -4.6  -3.10677   AATTAAGGCAGGCAA                 GGCC TCA AGCC                 CTAAATTCTACGCTA  47 38
CX034_RS17130 3533802 .. 3533818 - -10.8  -3.95584   TCTGGAGCAATGAAA              GCCCGG ACGAG CCGGGC              CGGGGAAATTACAGC  79 34
CX034_RS17125 3533186 .. 3533238 - -15.5  -2.79188   GAGGGAAGGGAATGA GTGCCGG-C-CCCGCGCAGG-GGCCG GCTG CGGCCGCCGGCGGGGGAGGCCGGCGC ACCGCGGGGGGCGCT  75 40
CX034_RS17115 3530526 .. 3530542 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CX034_RS17095 NONE
CX034_RS17090 3526774 .. 3526800 -  -8.7  -3.53012   CTGCGGTGCGCCAAA        GCGCGC-CGC AGGCCGGG GCGGGCGCGC         CTATTCGAGCTGGAT  62 26
CX034_RS17085 3525693 .. 3525729 -   -16   -4.2558   GATTGTCCAGGAAAA   CGCGCCAATTCCCGC TTGATTGG GCGGGA-TTGGCGCG    CAATGGGCAGGCGCC  95 41
CX034_RS17080 3524804 .. 3524814 -  -2.4  -3.01497   GCAGCCGAAAGCATA                 GCCG TTC CCGC                 TCCGGCCGCCTTACT  41 84
CX034_RS17075 3523370 .. 3523402 -  -3.2  -4.72272   GTTCTCCACGAAAAA     GGGGGCG-GAACCGG AGGG CCGGCGCGCGCCGGC      GGCGTGCGCCGGCCG  75 476
CX034_RS17065 NONE
        argF 3521065 .. 3521087 -  -6.3  -2.58714   TTTGACAGCAACGGA           CCGTCAAAC AAGAA GTCTAACGG           GGCATTTTAGCGCTT  46 112
        argG 3519641 .. 3519670 - -23.7  -4.08394   ACACCTGCGGCAAAA       GGGTGCCTGTCCC GGCA GGGACAGGCACCC        TCGCGCGGTTGCCGC 100 41
CX034_RS16990 3506581 .. 3506617 - -20.4  -3.34398   GCGGCGCGGCAAAGA   GAAAGCCCCGG-CAATC ATGC GATTGACCGGGGCTTTC    ATGAAGGCAGGCCAT 100 60
CX034_RS16980 3505645 .. 3505667 - -12.7  -5.63517   GGCGCAAAGAAAAAA          CCCCGG-CGC TTGC GCGACCGGGG           TTTTTGGGCACATCA 100 65
CX034_RS16970 NONE
CX034_RS16965 3502692 .. 3502702 -  -4.6  -2.92371   ATGGAGGCAACCATA                 CCAG ATG CCGG                 TTTACGGCTGGCTGG  44 53
CX034_RS16960 3500948 .. 3500958 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS16955 3499693 .. 3499725 -  -3.2  -3.05844   TGTTGCACGCCAAGA      CGGCGGTGGTCGAC GGCGT GTGGTCCACGGTCG      GGTCGAGCAACATGG  43 244
        egtD 3496256 .. 3496270 -    -7  -2.71011   ACGGGCGGGTAAGCA               GGCCGC GCT GCGGAC               GTGGGTGGCGGGCGC  48 366
CX034_RS16930 3495058 .. 3495089 - -20.4  -4.37886   TCATCGCGCACAAAA      CAAAATGCCCGCAA GCGA TTGCGGGCATTTTG       TTTTGAATTCTCTGG 100 38
CX034_RS16915 3493567 .. 3493607 -  -5.8  -3.58536   AAATTGACGGCCAAA  GCCGCCTCAGTCCCCGCG AATGG CGCGCCGGCCGCGGCGGT  AGACTGGCGCAGCCT  57 309
CX034_RS16905 3492798 .. 3492853 - -13.9  -4.11216   CCGTTACGGTTAAAA GTCGCCCTGCGCGGCCCTGGCGCCGA ATATG TCCACGATAGGG-CGCGCAGGGCATC AATAGGCAAGACTGG  85 77
CX034_RS16900 3491302 .. 3491312 -  -8.2  -3.14132   CCGGCCGCTGACGAA                 GCGC GCC GCGC                 TAGTGCTGGCCGGAC  56 25
CX034_RS16875 3486448 .. 3486467 -  -8.6  -3.68222   TGCGAATCTGAATAA            TGCGAAGC ACGC GCTTCACA             ATATGCATATAGGCA  65 139
CX034_RS16870 3486111 .. 3486132 -  -3.6  -3.86015   TATTGGGCGGATAAA           GGGCCAGCC CGGAT GGC-GGCCG           CCGGACCGCCGGGAT  57 65
CX034_RS16865 3484954 .. 3484968 -  -2.7  -2.69151   TGGCTTCAGATACTA               CGGGG CTCAT CGCCG               CACTCCTGGCAGGAA  40 82
CX034_RS16860 NONE
CX034_RS16855 NONE
CX034_RS16850 NONE
CX034_RS16845 3481070 .. 3481085 -  -7.5  -2.87132   CCCCCCTCGCAGATA              CGGCG CCTTGC CGCCG               GGGCGGCGAGACCGG  52 139
CX034_RS16840 NONE
        groL 3478817 .. 3478840 - -19.6  -4.86621   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTTGGGAAG 100 87
CX034_RS16825 NONE
CX034_RS16820 3474072 .. 3474085 -  -9.5  -3.53012   CGGCGCGCTTGGAAA               CGGCG GCGC CGCCG                CTCAGTCCAGGACGA  64 27
CX034_RS16815 NONE
        pyrF 3471848 .. 3471883 - -20.4  -2.59748   CACCCTGAGAAGTCA    GCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGG     GGGGTTACGTTCTTA  95 30
CX034_RS16775 NONE
CX034_RS16770 NONE
        phnD 3464205 .. 3464242 - -11.3  -3.02511   TGTACTCCTGGAACA   CCATGCCGATGCGCCG GCGCGCG CGGCGCAGCGAC-TGG   CCGCGCACGCGGGCC  62 261
CX034_RS16755 3463028 .. 3463059 -  -6.7  -3.78329   GTCGAGCAATTGAAA      GGCGCGTTCGAT GTCGGCCGG ATCGAA-GCGCC      GCATCCAGGTATTGA  64 101
        phnE NONE
        phnE 3460791 .. 3460811 -  -3.9  -3.59979   CCCGCCGAGCCGAAA            GCCTAGGAT AGT ACCCAAAGC            TAACCCGGAAATTGA  51 165
        rsmD NONE
CX034_RS16720 NONE
CX034_RS16715 3456430 .. 3456454 - -15.7   -3.9941   TGGCCGACAACGAAA          GCGCGCCGG TGACAGG CCGGCGCGC          CGCGAGGGGGGGAGG  91 59
        benE 3455245 .. 3455271 - -12.2  -3.57144   TGCCGGATCCTGAAA         GTGCACCCCGAC ATG GCCGAGGTGCGC         TGGCCGTCGTAGGCC  74 45
CX034_RS16695 NONE
CX034_RS16690 3451071 .. 3451087 - -13.7  -4.72272   GCGGCCCACGAAAAA              GCCCTCC AGC GGAGGGC              TTTTTTTCTGAGGCG 100 49
CX034_RS16680 3448676 .. 3448718 -  -3.3  -3.66874   TCAACCGCATCGAAA CCGACTATGCGCG-GCGC TATCAGGC GCGCGCGCGCGTGCTCAG GCTGACCGACGGCGA  51 504
CX034_RS16645 3438446 .. 3438460 -    -7  -3.41636   AAGCAAGGCAAGGAA               CGCGAC GAG GGCGCG               CCCGGAACGTCGGCG  56 172
CX034_RS16640 NONE
CX034_RS16635 3436328 .. 3436371 - -10.9  -2.57344   CAGTCTTGCGACAAT CGGCACGGCAGTGGGGGCGGC CGGG GCCGCCCGC-CGGGC-TGCCG TCAGTTGAGGTTGAT  59 26
CX034_RS16630 NONE
CX034_RS16625 3433759 .. 3433769 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 110
CX034_RS16620 3432563 .. 3432576 -  -3.7  -2.71791   AGGTCTTGTTGAAAC               GCCGG CCGG CCCGC                TGCAGGAAGGGCCTG  41 204
CX034_RS16610 3432262 .. 3432290 -  -3.8  -5.55769   GGCTACAAGAAAAAA       GGAAGCACGGCAG GTAA CCGCTA-GCTTCC        CTTTTTGGTGTTTGG  95 38
CX034_RS16605 3432139 .. 3432158 -  -6.3  -3.94877   ATCCTGGAACAAGAA            GGCTCGC GACGCG GCGGGCC             TTGAAGTGTTTGGAG  64 35
CX034_RS16600 3431654 .. 3431673 -  -7.1  -3.14468   CGCCATTATAGGCAA            GCGCGCGC GCCGG GC-CGCGC            TACGGCCGGATCACG  52 25
CX034_RS16595 NONE
CX034_RS16585 NONE
CX034_RS16580 3428952 .. 3428964 -  -4.7  -3.54424   TTCGACCGGGGGAAA                CGGCG TGT CGGCG                GCCAGCCAGGGCAGT  52 50
CX034_RS16570 3427417 .. 3427454 -  -3.2  -3.00923   GTGGAAGAGGATAGA   CATGGGGCGGAATTGT AGATCG ACTTTGCCGCCCCGCG    CGTGCTCAGGGCGGC  42 31
CX034_RS16565 3426334 .. 3426346 -  -6.2  -4.74103   TGCCCAAGGCAAAAA                GCCC TCTTG GGGC                CCATGCCCGCTCGGG  82 49
CX034_RS16555 3424203 .. 3424238 -  -8.8  -3.54424   TCGCATTCCGCGAAA    CGG-CGGGCGCGCAGGC CTC GCCCGATCGGCCGGCCG    GGCCGCGCGATGCGC  62 67
CX034_RS16525 3415348 .. 3415365 - -10.5  -3.21218   ACGCCCGAGCAGGAA             GGGCGCA GCAA CGCGCCC              AAGCGCCAACTGGCA  60 82
CX034_RS16505 NONE
CX034_RS16500 NONE
CX034_RS16495 3410866 .. 3410878 -  -2.6  -3.07816   TCTGGAGGCAGCCAA                CGAG ATCCA CCCG                CCCTTAGTGGAGACG  41 29
CX034_RS16490 3409459 .. 3409477 -  -6.7  -3.77832   GCGCAAAGCGAAGAA            CGCACCGG CCAC CCGGTG-G             ATGCGCGCCGCAACA  61 313
        galU 3406944 .. 3406962 -  -4.4  -2.71924   CATGGCGCCGCAAAT             GGTGGCCG GCG CGGTCATC             GCCTTTACCGAGCGC  40 299
CX034_RS16460 3402753 .. 3402779 -  -9.5  -2.62184   CCCGGCGGTACAGCA        GCTGCGCTTCGGC GCC GCCG-AGC-CAGC        CGGCGCGCGCGCCTG  55 143
CX034_RS16445 3398868 .. 3398882 -  -2.8  -4.09685   CGCCAGCCCCTAAAA               TGCC CCTGTCC GGCA               CGCGCCGCTTTTCCG  59 521
CX034_RS16435 NONE
        dusB NONE
CX034_RS16425 NONE
        purH NONE
        ruvC NONE
        ruvA 3393301 .. 3393349 - -10.8  -3.30124   GCTCACGCGCGACAA CGTGGCCAGCGGCGCCGCGCCCTC GGG GTTGGC-C-GCGCCGCCCGCCGCG CTGGAGGCGGTCGCG  66 83
        ruvB 3389958 .. 3389992 - -14.9  -4.84359   CGAGGCCGAGAAAAA    GCCGCGCAGCTCGCGC GCGG GCGCCCGC-GCGCGGC     CCGACCCCATCGACC 100 272
CX034_RS16380 NONE
CX034_RS16375 3385833 .. 3385868 -  -9.1  -3.03124   GGCCATGCGTGAACA   TGC--CCAGGCGCGC GCGCAATG GCGCGCCTGGATGCA    GGACTACGATGCGTT  55 336
CX034_RS16360 NONE
CX034_RS16355 NONE
CX034_RS16350 NONE
CX034_RS16345 3380767 .. 3380810 -   -21  -3.53091   AGCCTGGCGGGCAAA GTCAGCGGGTGCCTGTCCCC CTGC GGGGACAGGCACCCGGGGAT CAGTCTATCTTGTAG 100 25
CX034_RS16340 NONE
CX034_RS16335 3378202 .. 3378215 -  -2.4  -4.10144   TGAAGACAACAAGAA               CGAT CCGCGC ATCG                CGCGCTTTATCAAGG  58 151
CX034_RS16325 3376221 .. 3376231 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS16320 3374704 .. 3374730 -  -5.9  -4.14243   CACTCCAGCGCAAAA        CCAACA-GTGCC CTGG GGCACGTGTTGC         AGAGACCCCACTCTA  66 512
CX034_RS16290 3370925 .. 3370938 -  -5.9  -6.06723   GGGGCGAAAAAAAAA               CCGCC CGAA AGCGG                TTGATCAATCCTGTG 100 468
CX034_RS16285 NONE
CX034_RS16280 NONE
CX034_RS16275 3367512 .. 3367546 -  -2.6  -2.74012   TCAGCAGCGCAATGA     TCCGGCGCACCACCCC GTT GCTGTAGCGCACCAGG     TCGATGGCGTGCCGA  38 50
CX034_RS16270 NONE
CX034_RS16265 3366163 .. 3366187 - -15.7  -4.67038   GCCCCAAAAGCAAAA          GCCCCACTGGC TCG GCCAGCAGGGC          TTAGAAAGAAGAAGG 100 77
CX034_RS16260 3365335 .. 3365353 -  -3.9  -3.28924   GATGGCTTGGTAGAA            CGA-TTCC TGGA GGAAGTCG             CCTTCGAAGCCGGCC  47 186
CX034_RS16245 NONE
CX034_RS16240 3363174 .. 3363191 - -10.5  -3.65351   GCAGGCTGACGGAAA             CCCCCGC GTGA GCAGGGG              CAACCGTCAATCGGC  70 43
CX034_RS16235 NONE
CX034_RS16230 NONE
CX034_RS16225 NONE
CX034_RS16220 NONE
CX034_RS16215 NONE
CX034_RS16210 3360688 .. 3360701 -  -9.5  -5.46657   GAGGGCAATAAAAAA               CCGCC ATGT GGCGG                GTTCCAGTTGCGCCC 100 69
CX034_RS16205 NONE
CX034_RS16200 NONE
CX034_RS16195 NONE
CX034_RS16190 NONE
CX034_RS16185 3356290 .. 3356310 -  -3.1  -5.32944   CGGATAATGAAAAAA            TGCCGCGAC GAG ATCCCGGCG            TTCGGGATTACTCAT  89 33
CX034_RS16180 NONE
CX034_RS16175 NONE
CX034_RS16170 NONE
CX034_RS16165 NONE
CX034_RS16160 3350766 .. 3350778 -  -6.2  -5.80817   CTCAACACAAAAAAA                GCCC CCTAT GGGC                CCGTTCATTCATTGG 100 30
CX034_RS16155 NONE
CX034_RS16150 NONE
CX034_RS16145 NONE
CX034_RS16140 NONE
CX034_RS16135 3347975 .. 3347995 -  -9.7  -3.54741   GAGCAGCTGGTGAAA            GCCAGCC GCTTTCA GGCTGGC            GACCGCGTGCTGTTC  64 405
CX034_RS16120 3347334 .. 3347344 -  -8.2  -2.78216   CATCGTCACGAACGA                 CGCC CTG GGCG                 GCATGGTCGACGTGC  52 235
CX034_RS16095 3343444 .. 3343462 -    -3  -2.65264   TCACGATCGATAGGA             GCCCTG TGGCTGC CGGGGC             GGGCTGGCGCCCGCC  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB 3339510 .. 3339529 -  -2.8  -2.54325   CCTTTGCAAAGAGAG            TCACACGT GTTA ACGGGTAA             AAGGGCCCCACGTTG  39 15
         pal 3338930 .. 3338959 - -21.5  -4.54727   GGTCTGAAACGAAAA       CGTCGGGACGGCC GGAT GACCGTCCCGACG        CGTGGTGGGGCTGCT 100 56
        ybgF NONE
CX034_RS16055 NONE
CX034_RS16050 3336252 .. 3336279 - -10.5  -4.15453   GAAGTCAGCGGAAAA        CGCGCCGCGGCC GGGCT GGCGGCGG-GCG        AGGTGCTCATCCTAT  78 120
CX034_RS16045 NONE
CX034_RS16040 3334871 .. 3334882 -  -2.2  -3.21099   GGGCGTGACCAGGAA                GC-CG TGG CGCGC                GTAGTGCAGGGCCGG  42 465
CX034_RS16030 NONE
CX034_RS16025 3332713 .. 3332767 -  -2.5  -2.70932   CCTGTTCTGGAAGCA TCTGGGCCACG-CCGGCGCCAACACC TTGC GGGCCTGGGGCCGGGCCTGGACCGGC GGGCTGCTGGCGCGC  38 500
CX034_RS16015 3329589 .. 3329603 -  -4.2  -3.64703   TCGCGCTGACCGAAA               GCGG GCACACG CCGC               TGATCATGTCGCGCA  51 297
CX034_RS16005 3327093 .. 3327105 -  -9.1  -2.52464   GCGTGGCGCAATTCA                TCGGC CTG GCCGA                CGCCTTGCTGGCGGC  51 100
CX034_RS15985 NONE
CX034_RS15980 3320408 .. 3320424 -  -2.2  -3.53012   TGTCTTCGGGCCAAA              GTGGTA GAGGA TACCGC              GTTGCAGCCTCCTTG  48 94
CX034_RS15975 3319266 .. 3319285 - -16.4  -3.15147   GTCAAGCAATAGACA            GGGCGGCG CGTC CGCCGCCC             ATGCCGGCTGGCGGA  81 388
CX034_RS15950 3315777 .. 3315791 -  -3.4  -4.07687   ACCGGGCGGCGAAAA               CGCCGG TTT CCGAGG               CCGACGCCAAGCGCG  60 247
CX034_RS15915 3306535 .. 3306549 -  -2.1  -3.84406   CGCCTACCAGAAGAA               GATCG GCCCG CAATC               GTCGCTGCGCGAGCG  56 430
        nspC 3303605 .. 3303624 -  -4.2  -3.18366   GCTTCAATCAACAGA            GCCAGTTCC TCA GGA-CAGGC            TGTCTACGTAATCCT  45 15
CX034_RS15895 3302211 .. 3302221 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 119
CX034_RS15890 3301076 .. 3301102 - -10.1  -3.06133   GAATGTTCGATTGAA         GCGGTAGCCGT ACGAA ACGGCCACAGC         GTTGCGCTGCCGGCA  60 130
CX034_RS15885 3300352 .. 3300395 -  -2.8  -3.91897   CGGGTCACGTACAAA TGGTAGGGAACGCGGCCGGC GTCA GCGCGCCGCTTCCGCGACCG CCTCGATGGTGATGC  58 3
CX034_RS15870 3295681 .. 3295697 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CX034_RS15850 NONE
CX034_RS15845 3290988 .. 3291016 -  -7.9  -3.07113   TACTACCTGATGGAA        CCGGGCAGTGGCG AAG CGCCGCCGCGCGC        GCTGCCGCCGTGGCC  52 295
CX034_RS15835 3289360 .. 3289394 -  -8.5  -3.06183   TGCATCGGCACGGAA     TTGCGCGCGGTCC TGCCGGTAT GGTCGGCGCGCAA     GCAATGGCTGGCCGA  55 501
CX034_RS15810 3284940 .. 3284960 -  -8.2  -3.12999   GTATCCGACAGGTAA            GGGAGCCG GCCGG CGGCTCGC            ACACTCATACCCGGC  56 101
CX034_RS15805 NONE
CX034_RS15800 3283725 .. 3283750 - -13.3  -5.15969   CGCGAACGCAAAAAA         GCCGACACCAC GTTT GCGGTATCGGC          TTTCGCTATGCGCCC 100 108
CX034_RS15790 NONE
CX034_RS15785 NONE
CX034_RS15780 3277094 .. 3277128 - -13.5  -2.99947   GAATCTTCACAGATA    GCC-GGCCTCGCCGGC CGGC GCCGCCGATGCCAGGC     GTGCGGCGCCCAATG  70 152
CX034_RS15770 NONE
CX034_RS15765 3273551 .. 3273566 -  -7.5  -3.14211   ACTGCGCGCGAGCAA              CGGCG GATACG CGCCG               CGAGGCCGGGGCACC  54 62
CX034_RS15755 3272581 .. 3272602 -  -2.1  -3.07291   AAGTAGTCGATTGAA           CGGATTCGC ACCG ACGCAACCG            GTGTGTAGCGCTCAG  41 161
CX034_RS15750 3267388 .. 3267416 -   -11  -3.31779   AAGAACGCAAAGAGA       CGGCGCCGCCGCGC GAG GCA-GGCGG-GCCG       TGATTCACGGCGCTT  66 40
CX034_RS15745 NONE
CX034_RS15740 NONE
CX034_RS15735 3262444 .. 3262468 -  -2.7  -3.59979   GCCGGTTATGCGAAA          TCTGCATAACG CGG CGATTTGCAGG          GTTACTCCTTAGGCG  49 27
CX034_RS15730 NONE
CX034_RS15725 3260372 .. 3260388 -  -6.5  -3.54424   CGCCATCCGGGGAAA              GGGCG AACAGCA CGCCC              CAGTTCCATTGATAT  56 129
CX034_RS15715 NONE
CX034_RS15710 3258179 .. 3258195 -  -7.9    -3.273   GTAGAAAAGGGAAGA              CATGCGG CTA CCGCCTG              AGTATTGGATAACGG  56 41
CX034_RS15705 3256836 .. 3256849 -  -2.3  -3.44848   GGGCTTCACCAAACA               GGACG TCCA CGTCT                TCTACGTCAACAGCG  47 497
CX034_RS15680 3252199 .. 3252218 -   -15  -3.14564   CCATGGCGGGAGCAA            CAGGCGGC CGGC GCCGCCTG             GGGCTTGCTCGCCGG  76 151
CX034_RS15675 3250830 .. 3250848 - -10.2  -3.04461   GACCCAGGCCGAACA             CGCCGCGA TCC TCGCCGCG             CTGCGCGCCGGCGAC  59 182
        pepN 3235127 .. 3235139 -  -3.3  -2.74192   TACGTTTCAAGAGTA                GCTCC TAA GCAGC                CAGATCCAAGGCTTT  40 17
CX034_RS15605 3233902 .. 3233936 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS15580 NONE
        serB 3227379 .. 3227401 -  -6.1  -3.16039   AAGCAGCCGGAGTAA           GGCGCGCGG GCCGG CCGGGCGGC           GGGAGGCCGTCGCGA  51 131
CX034_RS15565 NONE
CX034_RS15560 NONE
CX034_RS15555 3222220 .. 3222236 -    -3  -4.11484   GGCAAGTGCTGAAAA             CAG-ACC GGCT GGTGCTG              GAGCCGCAATCGATG  61 509
CX034_RS15455 NONE
CX034_RS15450 NONE
CX034_RS15445 NONE
CX034_RS15440 NONE
CX034_RS15435 3198005 .. 3198021 -  -2.1  -3.05384   GTGGCCGTCACCGAA              TGGGCGC TGC GCGTCAA              CGCGCGAGCATGAGC  41 22
CX034_RS15400 3190715 .. 3190748 -  -6.9  -3.09516   CTTTTCATGACGCAA     CCTAATTATCAAAGA ATAT TCTTGGATAATTAGT      CAAAGCGAGATTACC  52 108
CX034_RS15395 NONE
        mexI NONE
CX034_RS15385 NONE
CX034_RS15380 3184075 .. 3184085 -  -3.2  -3.28712   CGCGGGCCTGGACAA                 CCAG TAC CTGA                 AGGCCGGCGATACGC  47 239
CX034_RS15365 NONE
CX034_RS15360 NONE
CX034_RS15355 NONE
CX034_RS15350 3176093 .. 3176144 - -12.9  -2.53876   GCCTACCTGAAGGGA GGCACCGCGGCGC-TGGGCGCGGA CCGGC TGCGCGGCGACGCGCCGCAGTTCC TGACCGAGGCGATCG  62 232
        lrhA NONE
CX034_RS15320 3168597 .. 3168615 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 303
CX034_RS15285 3159586 .. 3159623 -   -12  -3.05816   GGAGCGCTCATGGAA   GCAGCGCCTCGAACAGC TGCAC GC-GTTCGCGTCGCTGC   GGCAGGCTACCCAGT  66 470
CX034_RS15255 3154101 .. 3154111 -  -4.6  -4.07568   CGGGCCTGGGGAAAA                 CAGC GGT GCCG                 TTTGATGGTGCACCC  62 31
CX034_RS15250 3152998 .. 3153037 -  -2.8  -3.90291   AGCTGGTCAACGAAA  GCGATATCGAGCATG-CCA TCG TGGTCCTGCTGGAAATCGA  GAAGACCGTGGTCGA  56 434
CX034_RS15240 3150904 .. 3150914 -  -4.6  -3.36327   CCAGCGCATCTACAA                 CGCG GCG CGCA                 ATGTCGAGGCGGCCG  49 255
CX034_RS15215 3146458 .. 3146472 -  -2.1  -2.50816   TGGTCATCTACGAAT              GGATCC TGCA GGA-CC               TCGGCCGCTGGGGCT  37 520
CX034_RS15185 3140098 .. 3140109 -  -7.2  -2.52623   GCTGGCCGAGAACAT                CGCC TACG GGCG                 GCCCGGGGCCACGCA  48 497
CX034_RS15175 3137677 .. 3137693 - -11.5  -2.77013   GATGTCGGTAACAAG              GCGCAGC ATC GCCGCGC              TCAGCCCAGGCGTTC  62 26
CX034_RS15170 NONE
CX034_RS15165 3137167 .. 3137186 -  -4.2  -4.00042   GTGCGCAGCAAATAA            GGCCGCGCG GTT CA-ACGGCC            GGTATCGGGGTAGTC  59 17
CX034_RS15155 3135134 .. 3135148 -  -7.1  -2.70932   GCCGGCGCTGAACTA               CCGCT TCGAC AGCGG               CAGCACGCTGACCTT  49 365
CX034_RS15140 3132225 .. 3132253 - -16.9  -5.53288   CCGAAGCGAAAAAAA        TCCCATGCAAATC AGT GATCTGCATGGGA        TTTCCGGTCTGGCCG 100 59
CX034_RS15135 3129057 .. 3129115 - -29.8  -3.25072   GGGAGGAGAACGGAA TG-GGCGCGGCCATCCGGCCGCCCGCGGC TTGC GCCGCGG-CGGCCGGATGGCCG-GCTTCA GGACAGGGGATGAAA 100 49
CX034_RS15130 NONE
        accB NONE
CX034_RS15120 3125552 .. 3125572 -  -3.9  -2.93853   CCGTGGCAACGAAAC            CGGGACC GGTTCAG GGTCGCG            TGAACGAAATGTGTT  43 15
CX034_RS15115 NONE
CX034_RS15110 NONE
CX034_RS15105 NONE
CX034_RS15100 NONE
        accC NONE
CX034_RS15085 NONE
CX034_RS15080 3118479 .. 3118497 -  -6.7  -4.11216   CCGTTACTTGCAAAA            CGCG-TGC GGCT GCAACGCG             CGACGTCGGCGGGTG  67 137
CX034_RS15075 3118142 .. 3118157 -  -3.2  -3.10775   ACGCGCATGCAAAAG              GCGC TCCAGGTG GCGC               AACCGCGACGATAAC  44 105
CX034_RS15070 3116919 .. 3116931 -  -6.3  -2.88544   GTCCACTCCTACACA                TTTGG TAG CCAAA                TTGTAAAGGATTTCG  48 93
CX034_RS15065 3116654 .. 3116675 - -17.3  -3.84451   CGGGCGAAATGCAAA           CGGGCAGCC TGCC GGCTGCCCG            TCGCGCGCCCCTCAA  95 37
CX034_RS15060 3116184 .. 3116194 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CX034_RS15055 3115086 .. 3115122 - -15.7  -3.14132   CGGCCCGTGCAGGAA    CGGCCGCCTGACGGCCT TGC AGGTCGACGAGCGGCCG    GATGCCGGTGGCATG  77 82
CX034_RS15040 NONE
CX034_RS15035 3110936 .. 3110948 -  -9.1  -3.17075   CGGCGGCTAAGCGAA                TCCGG CCA CCGGA                TGCGGCGCATAGGCC  59 4
CX034_RS15020 3108379 .. 3108412 -  -5.8  -3.62046   CGACTTCCTGAACAA     CATGCGCCCCAGCG ACGGCG CGCCCGCGCGCGTG      CAGCAGCCCGGGCAG  57 255
CX034_RS14995 3101725 .. 3101735 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS14990 3100403 .. 3100454 -  -9.2  -3.21099   GCCGCTGATCAGGAA CGGCGACCTGCGCGCGCTGGCCG TCACGAG CCGCAAGCGCTCGCCGG-CGCTG CCCGACGTTCCGGCC  56 292
CX034_RS14980 3098470 .. 3098501 - -11.6  -2.81133   GACGCACCCAGCAGA      GAGCCCCGAC-TGGA CAA TCCGTATCGGGGCTC      TCGTTTGCGTGGGTA  63 238
CX034_RS14970 3096674 .. 3096699 - -18.3  -4.55798   GAGGGGAAATGAAAA         GCCCCGCGCAA CACC TCGCGCGGGGC          AAAATAGTTTGTTAA 100 291
        gyrA NONE
        serC NONE
        pheA 3087141 .. 3087192 -  -4.5  -4.84761   ATACCTGCAGAAAAA CAATATGGCAG-CGCCG-GACGGA CACACGC TCCGTCACGGCGGCCGCC-TGGTG TGCGTCAACCACGCC  82 47
CX034_RS14915 NONE
        aroA 3084884 .. 3084897 -  -3.1   -3.6692   GCGGATGCGAAAATA               GCCATG GGG CA-GGC               GCCGTTCAGTCCCGC  53 31
CX034_RS14905 3084205 .. 3084215 -  -6.8  -3.91984   ATACTGCCGAAACAA                 CACG CGC CGTG                 GCTAGGCGCACCAGA  66 27
CX034_RS14900 NONE
CX034_RS14895 3081882 .. 3081911 - -16.6  -5.00616   GCCGGCCCGAAAAAA       CAAAGCCCCTTG AACAAG CAAGGGGCTTTG        CCGGTAGAACACCAA 100 67
CX034_RS14890 3081399 .. 3081413 -  -3.4  -3.56092   CCACCAGGGTTCAAA               GTCCAC AGC GCGGGC               TCTCGGTAGGAAGTA  49 59
        lapB NONE
       rfaE1 NONE
        rfaD 3078229 .. 3078253 -  -4.2  -3.40597   CGGTGCACGCAAACA         TCCACCCGGGC AATT ACCCGGG-GCA          AATCCGCTACTTCAG  49 32
CX034_RS14870 3077596 .. 3077606 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS14865 3076526 .. 3076548 - -14.1  -3.78934   TGCCGCCGATAATAA           CCGCCCCGG ATCGG CCGAGGCGG           TTTAGCCGCGCTGGC  83 69
        cysM 3075215 .. 3075264 -   -17  -3.01712   CTTCCTGGTCGAACA TGGCTGGCAGCGCGGCCTGC-CG GTGTT CGCGCCGGTCGCGCTGCCGGCCG ATCCGGCGCCGCTGG  82 361
CX034_RS14850 3073417 .. 3073432 -  -7.5  -3.08006   AAATAACAATAATTA              CCCGG CGAAAC CCGGG               ACCGCATTGCACAAT  54 53
CX034_RS14845 NONE
CX034_RS14840 3071664 .. 3071683 - -16.4  -5.75945   ATGGCCGAAAAAAAA            CCGCGGGC GACA GCCCGCGG             CTTTCTCTCTGCGTG 100 52
CX034_RS14835 NONE
CX034_RS14830 3068880 .. 3068895 - -11.8  -5.86332   CCAAGGCAAAAAAAA              CGCCCC TTGC GGGGCG               TTCTCGCCGAAGCGG 100 46
CX034_RS14825 3067606 .. 3067622 - -11.5   -3.5944   ATCGAGATGCCGAAA              CCCGGCA ATA CGCCGGG              GCGCTGGCGCCGCGC  72 95
        cysA 3064519 .. 3064552 -  -5.1  -2.71712   GTCGGGCCGGTAAAC     CGTGATGG-CGCGCCC GTA GCGCGTGGCCACCGCG     TCCAGCACGCCGAGG  45 264
        cysD 3062769 .. 3062780 -  -3.6  -3.90048   GGGTGTCGAAAAATA                GCGG TAGG CCAC                 ATCGATGGTGATGCC  59 330
CX034_RS14790 3060248 .. 3060268 -  -4.5   -3.6215   CGAATGCATGTCAAA            CCACTGCCG CGA CGGGCGCGG            CCCCCTACCACTGGC  52 80
CX034_RS14785 3059713 .. 3059728 -  -4.6  -4.62069   CTGCTACGGGAAAAA              GTAGGC ATAG GCCGAC               TGGCTGGCTGCCTGG  75 86
CX034_RS14775 3058116 .. 3058167 - -22.6  -2.87132   GCTTTCTTCCAGATA TCTTTTCGCAATAAAAGGACACCC TTGC GGGTGCCCTTTTATTGCGGAAAGC CGTGCCAGACACAAA 100 81
CX034_RS14770 3057235 .. 3057252 - -14.1  -5.14563   GCCGGGATGAAAAAA             GGCGCGC CACG GCGCGCC              GTACTGATCGGGAAT 100 60
CX034_RS14760 3054850 .. 3054868 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 244
CX034_RS14740 3050985 .. 3051017 -  -3.4  -3.80733   GGCAGGCCAGAATAA      CCCGGCGTTT TTAAATTTGCGTT AATCGCCGGG      CCGGCGGCGGCCGCT  56 69
CX034_RS14725 NONE
CX034_RS14720 3044675 .. 3044705 - -25.6  -3.55444   TCGCCACTGCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTGGACGGCCGCG 100 46
        aceE NONE
        aceF NONE
        lpdA 3031525 .. 3031548 - -18.2  -2.52464   CGCCGCGCCAACGCA          CAAGGGCCCC GCGA GGGGCCCTTG           TGCTGCCATGCCGCG  85 45
         tkt NONE
         gap 3025012 .. 3025054 - -21.4  -4.07568   GCCTGCCTGCGAAAA GGGCCAGATCCGTTTCCCCG TGA CGGGAAAACCAACCTGGCCC TTGCGCCCTGTTCAG 100 51
         pgk 3023552 .. 3023567 -    -6  -3.01712   CCGGGCCGCTCAAGA              CCCGCG CCGC CTCGGG               CATCACCGGCTTCGA  48 227
CX034_RS14600 NONE
CX034_RS14595 3013613 .. 3013629 -  -2.1  -3.01712   CCGGGCGCGTCAATA              GGCTTGC TGC GCATGGC              ATGGGTAGCAAGAGA  41 68
CX034_RS14590 3012217 .. 3012251 -  -6.3  -3.64487   CGACACGGCCAAGAA    GGTCGCGCGGCTGGAA GGCC TGCCGG-CGCGCGAGC     GCGCCGACTTGCAGC  59 456
CX034_RS14580 3010326 .. 3010351 -  -3.9   -4.7416   TGAAAATCTGAAAAA         CGGCGCGC-CCA CTA TAGCGCACGCCC         TATTGCCGGGCGGCG  77 25
CX034_RS14575 NONE
CX034_RS14570 3008856 .. 3008866 -  -8.2  -3.02511   CCGACCGGCTGAACA                 GCGC CCG GCGC                 GCGTTCGGCCTCGGC  55 264
CX034_RS14555 3006841 .. 3006865 -  -7.8  -3.93369   TGAACCTCAAGGAAA          TCGGCGCCGT GCTCA ACGTCACCGA          GGCGCGCGTGTGCCA  67 436
        flhD NONE
        flhC 3004807 .. 3004847 -  -4.6   -2.7386   AACCGACGCCAATGA TCCCCCCTGACCCGTCG GGCAAAAA CG-CGGGTTATGGGGGG  TTTTCTGGTGCTTTT  43 64
        motA NONE
        motB NONE
CX034_RS14525 NONE
        cheA NONE
        cheW 2999901 .. 2999923 - -12.7  -3.90856   AAGCGTTGAACGAAA          CGACGGGCGG CGCA CCGCCCG-CG           GACTGACCGCCGTCA  82 38
CX034_RS14510 2997805 .. 2997840 -  -7.5  -2.82516   CGGCGCAGCACCACA    CCGATACCGGCCCGCC GCGCT GGCGCGC-GAAATCGG    CCAGGATGGGAAAGT  52 341
CX034_RS14500 2996207 .. 2996246 -  -2.1  -4.43909   ACTCCAAGAAAATAA TGTCCGGACGC-CCGCTCC GTTG GGACCGGGGCGTC-AAACG  CGATGCCCGCGGTCG  67 19
        cheY NONE
        cheZ 2994958 .. 2994976 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 206
CX034_RS14465 2991974 .. 2991997 -  -6.6  -3.68351   TGCGCACCATGGAAA          CGGCGCGCCCC ATG GTGGC-CGCCA          CCAACACCGGCATCA  61 231
        dacB NONE
CX034_RS14395 2976341 .. 2976355 - -11.4  -6.34424   GCGGCAAAAAAAAAA               CCGCCT GCA AGGCGG               TTTTCCTGTGGGCGG 100 59
CX034_RS14390 2974961 .. 2974985 -  -3.4  -3.34398   GTCGTGCGCGAAACA         CGCG-CCGGTC CTGT GCCCGGTCCCG          CCCCGCAGGCCAGGG  46 77
CX034_RS14385 2971926 .. 2971940 -  -2.7   -4.2679   CAAGCTCCAGGAAAA               CCTCC TCCGC GGGGG               ATAGACCCTCCTCGC  63 42
CX034_RS14375 2969449 .. 2969492 -  -8.6  -2.66316   GCGTTCATCATACCA GCCGCGCCCCGCGCCACGCA CCCC CGCGTGCTACGGGGTGCTAC TTCAATTGCGTAATC  52 22
CX034_RS14370 2969042 .. 2969094 -  -7.4  -3.66999   ACCGATCTACGCAAA CCCATTGTGCATGCCGGGGCGGAC GCGCG GCCCGCCCCGCCGTGATCAGCGGC GGCTGATCAGCAGGC  63 18
CX034_RS14365 NONE
CX034_RS14360 2968130 .. 2968151 -    -5   -3.7282   GGACGCCACCAACAA           GTGGCCGG GCGAAA CCAGCCGC            GAATGGGGCACGCCC  58 146
CX034_RS14350 2965354 .. 2965374 -  -3.1   -4.4017   CCAAGGTCGAGAAAA            TGGCCGCCA GCC TGGCGATCT            GCGCGCCCACGCTGG  68 422
CX034_RS14335 2963587 .. 2963603 -  -4.4  -3.27704   AGCTGCGAAAGTGAA             CGATGCG GCAG CGCA-CG              CCGGAAAGATGCTAC  49 89
CX034_RS14330 2960990 .. 2961004 -  -3.4  -2.62184   CGGCCCGGTACACCA               TGCCGG TCT CCAGCG               AGGCCCACAGCCGCC  39 283
CX034_RS14320 2959361 .. 2959395 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 221
         ppx 2950305 .. 2950339 - -21.4  -2.52464   GCTCCCCGGAAGTCA     GCGGGAGCCAGTCCCC TTC GGGGACAGGCTCCCGG     AGATCGGGTTTCAGG 100 36
CX034_RS14250 2943477 .. 2943502 - -10.3  -3.53012   GCGGCCCGCCTGAAA         CCGGCGGGCCC GTCC AGGCCGGCCAG          ATCAAGTACTATCGC  67 34
CX034_RS14245 2942001 .. 2942015 -  -5.6  -3.02144   CCAGGCCGCGCAACA               TGGGCC CCA GGCTCA               TGCCCTGCGCGTCGG  47 419
        dusA 2938423 .. 2938457 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS14200 NONE
CX034_RS14195 2933919 .. 2933929 -  -3.2   -3.7614   AATCAGGACGAACAA                 CTGA CTT CCAG                 CCCAGCTGCCCAGTC  56 2
CX034_RS14190 2932857 .. 2932888 -  -9.4  -3.03243   ACGGATCTTCGAAGA      GCATTAC-CGGCGGG CCG CCCACCGCGAAACGC      CCGGCAGCGGACTGG  55 174
CX034_RS14180 NONE
CX034_RS14175 2928040 .. 2928062 -  -5.5  -3.72324   CACCTCCAGGAAGAA          CAGGGCGTCC ATCA GGCCGCC-TG           CGCCGCCAGCCGGCG  57 14
CX034_RS14170 2926940 .. 2926959 -  -6.4  -3.73775   CCCAGGCCCATGAAA            GCC-GCCTG CCC CAGGCTGAC            CAGCCCGGTATAGCC  59 239
CX034_RS14160 NONE
CX034_RS14155 2924338 .. 2924352 -  -3.5  -2.78384   GCGCGCGTCATGACA              GCCAGC GCTT GC-GGC               GCTTGTAGTGCTTGA  41 3
CX034_RS14150 2922422 .. 2922443 -  -2.9  -3.12351   GCGCTGGATACGCAA           CGCCGGACCG CGC CGGTACG-CA           CCGCCACCTGCCTGC  44 50
CX034_RS14145 2921241 .. 2921278 -  -7.6  -2.73364   GGTCGAGGCCAAGGA   CGCCGGCGACGAAGAA GCCATG TACTTCGACGCCGACT    ACATCCGCGCGCTCG  49 504
CX034_RS14110 NONE
        lolD NONE
CX034_RS14100 2912370 .. 2912401 -  -4.2  -3.78775   GCGGGCAGGAGGAAA      CAGGGGCCCGG-CGC CGG ACGGCCGGGCGTCAG      GGCGTCGCCGCCCTG  57 22
CX034_RS14095 2908778 .. 2908802 - -12.8  -6.34424   GCGGCAAAAAAAAAA          CCGCCAGTCG ATACA CGACAGGCGG          CCAACAACGGGCGGA 100 109
CX034_RS14090 2908261 .. 2908279 -  -3.8  -3.60762   GAGTGGCCAAAAAAG             GCGAAGTC GCT GACTTGAC             GAGGATTTCGCCTAC  51 187
CX034_RS14085 2904185 .. 2904213 -  -9.4  -2.87132   CCTGCTCGCCAGACA        GTGGGAGGCGCC CCATC GGCGCCCCCCGT        CTTACGGCGCTTAGT  56 36
CX034_RS14075 NONE
CX034_RS14070 2899518 .. 2899532 -  -2.7  -3.02263   AGAGGTCCTGCAAGA               CCTCG GGTAG CGCGG               CTTCGCCGCGCTCCG  42 53
CX034_RS14065 2898604 .. 2898627 -    -8  -3.09015   TGCATAGGGATTCAA          GGGCAGCCGG GGCG CCAACGGCCC           GGCGCGAAAGGCGCG  54 43
        greB 2897773 .. 2897807 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 241
CX034_RS14030 2890375 .. 2890393 -  -5.2  -4.42081   AACATAAAGGGAAAA             CCCGCAAT TTT ACTGCGGC             CCGCTTCCCTGCCTG  72 16
CX034_RS14020 NONE
        odhB 2883754 .. 2883810 - -12.9  -3.74693   CCGGATTCGACGAAA CCGGCAGGGCCGCC--GGGC-GGGCCGC GATG GCGGCCCGGCCCTTGGCGGCAGCGACAG AAGAAGGCATTCTTC  79 58
        lpdA NONE
        zapE 2880892 .. 2880908 -  -3.5  -3.14132   GGCCTGCCGGAGGAA              GTCGCCG CCA CGGTGGC              CTTCCTGGCTTCCGA  45 114
CX034_RS13995 2879036 .. 2879070 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS13960 2873495 .. 2873523 - -19.6  -2.53876   GCTGATCGCAACGCA       GGCGCCGC-CCCG TCAT CGGGTGCGGCGCC        TGCGTCGTTGCCCCG  93 67
CX034_RS13950 2868832 .. 2868850 - -11.6  -3.91911   CGCAGTCCAAGGAAA             GCCCGGCC CCA GGCCGGGT             TTTCCTTTTGCGCGG  81 44
CX034_RS13940 NONE
        pgeF NONE
        phaC 2864428 .. 2864447 -  -4.8  -3.61894   AACGCCCGCCAAGAA            TGCCGGCC TTGC GGCCCGCG             CGCGTACTCAAACCG  52 33
        phbB 2863603 .. 2863631 -  -9.6  -3.04263   ATTTTACGTGTAATA       CCGGGCGTCCG CTTCCCCC CGGAC-CCCGG        CCCCCTCCGAATGCG  57 44
        phaR 2862926 .. 2862945 - -16.4  -4.24204   GACTCATACGGAAAA            GGGGCGCC CGTG GGCGCCCC             TTTTCCTTCAGCCAG 100 52
CX034_RS13915 NONE
CX034_RS13910 NONE
CX034_RS13905 NONE
CX034_RS13900 2859617 .. 2859631 -    -7  -2.79183   GGGACCGCCACCATA               CCGCGC CGC GCGTGG               CCGCGCTACCAGATG  48 31
CX034_RS13895 2858633 .. 2858643 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS13890 2857517 .. 2857539 - -11.9  -2.50816   GCGGCAGCGACGAAG           GCGCGCCGG GACCG CGGGCGCGC           TATGGGCCGGGCTAC  58 115
CX034_RS13865 NONE
CX034_RS13860 2852198 .. 2852216 -    -3  -3.58396   CGTGAAATTAAAAAT             CCCACTCG TGC CCAGTGCG             TATGGCAATGCCTGC  49 56
CX034_RS13855 2850514 .. 2850530 -  -6.5  -3.39895   CGGTGTAGCAATGAA              CCGGC TTTGTGG GCCGG              CATGTTGGTTCCGCG  55 167
CX034_RS13850 NONE
CX034_RS13845 NONE
CX034_RS13835 2845847 .. 2845859 -  -3.3  -3.35679   GCTGCCCATCGACAA                CCCCA ATC TGGTG                GTCGAGCCGTTCGCC  47 465
CX034_RS13825 NONE
CX034_RS13820 NONE
CX034_RS13815 2842698 .. 2842733 -    -9  -3.14132   GCGCTGGCCGACGAA   CTG-GCTGGCCCGGCG TAGGCG CGCCGG-CCGGCTCAG    CGCTGGCCGTCGTGC  59 22
CX034_RS13805 2840370 .. 2840387 -  -5.5  -3.34398   CGGCGCGGCCAAATA             GCCGC AACGGTCG GCGGC              TTACAGGCAGCGTCT  51 86
CX034_RS13785 2837773 .. 2837812 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGCCCAGG  64 4
CX034_RS13780 2836706 .. 2836746 - -16.2  -2.71011   ATGCCTTGGCAACGA  GCCGGCGCGGCGCTAT GGTATGCGG ATAGCGCCGCGCTAGC  TGTGAACTGTCAATA  77 21
CX034_RS13735 2828817 .. 2828863 -  -5.1  -2.97188   GGACAGGACGAGACA TGGCGCGCCACGCAGGCTCGA GGCCGGT CCG-GCCCGCGCATC-CGCCA GGGATGCGCGCGAGC  47 111
CX034_RS13730 2827881 .. 2827927 -  -5.1  -3.29461   GAAGTCTTTGCATAA CCCTAGGATACGCCATGCGCCGC GGC GCTATGCCTG-CGCATCC-AGGG CGGCCGCGCCGATCC  51 6
CX034_RS13725 2827589 .. 2827630 -  -4.3  -4.08216   CCAGGTCGGCGAAAA CCGGCTGACCATGATGTCGC AAG ACGGCACCCTGCCCAG-CGG CCCGTTGGCCGAGCA  60 73
CX034_RS13715 NONE
CX034_RS13710 2825544 .. 2825584 -  -6.6  -2.78596   TACCTCGTGACGATA CGGTG-CGCCGGGCGGCCG ATGG CGGCCGCCGGATGGCTGCG  CCTATGGTAGCCCGG  47 111
CX034_RS13705 NONE
CX034_RS13700 2824921 .. 2824944 -    -3  -4.07568   CGGCCGCGCGGAAAA          GAGCCAGC TTACCATC GCCGGCGC           GGCGCAGAAGGTCAG  59 37
CX034_RS13695 NONE
CX034_RS13690 2823670 .. 2823699 -  -7.7  -3.21395   AGCTGCTGGACAAGA       GCTGCGGCGCCGAG GCG CAAGGCGCCAC-GC       GGCTGGCGCGGGGGC  53 277
        clpB 2819036 .. 2819059 - -13.2  -5.48063   AGCGAACAGAAAAAA          CCCCTGG-TCC ATT GGATCCAGGGG          TTGAGAGACGCGGCG 100 69
CX034_RS13665 2817269 .. 2817298 -  -4.9  -3.05384   TCCGGCGCCAGCCAA       CTGCCGAGGTCCTG CTG CAGGATCCC-GCTG       ATCACGCGATCGCCG  45 123
CX034_RS13655 2813186 .. 2813219 -   -11  -2.68942   AGCGCCGGACAGAAC     CCCGATACGCCGCGC CTGGT GCGCGG-GCATCGCG     TCGACACCCTCAAGC  59 388
CX034_RS13645 NONE
CX034_RS13640 NONE
CX034_RS13635 2810010 .. 2810042 -  -9.7  -3.05463   ATGTGCGGCAGGCAA      CCCTGCCGGCGGG CTGCCGC CCCGCCGGCCGCA      ACAGCCGCGCCTGAC  57 47
CX034_RS13625 2807537 .. 2807558 -  -8.6  -5.47218   GCGTAGGGAAAAAAA           GCAGGCGC GCTCAG GCGCCGGC            GCGCAGCACCTGGCC 100 14
CX034_RS13620 2806173 .. 2806188 -  -7.5  -3.14132   GCGCGCCCTCATCAA              GGCGC GCCGCA GCGCC               GGCCACGGGCGCAAC  53 377
CX034_RS13590 NONE
CX034_RS13585 2800188 .. 2800199 -  -7.2  -4.15565   TTGAGTACCGTAAAA                CCGC CCAG GCGG                 GCCCACGAAACATGT  67 77
CX034_RS13580 NONE
        crcB 2799186 .. 2799228 - -13.2   -3.6502   CACGCCGGACTGAAA CCTGGCGCCCGCCGCCGGGC TCA GCGCAACAGCAGGCGCACGG TCGCCAGCCCCAGCC  79 3
         alr 2794867 .. 2794890 -    -8  -2.56596   TTGCGTAGCAATTCA          TGCCAGCAGG CCGG CCCGCCGGCG           ATCCGCACAATGCTC  50 39
CX034_RS13550 2793824 .. 2793846 -  -5.5  -4.45399   ACAGCAACAGGAAAA          TCTGGCGGCG TCAG CGC-GCCAGC           GTGACGATCCGGCCT  72 215
CX034_RS13540 2792040 .. 2792086 - -12.9  -2.73875   CGCCGCCGAACACGA GCAGCCCGAGGCGCGGCTA TCCGAGTTC CAGCAGCGCCGCCGGCTGC AACTGGCCATCGAGC  63 213
        radA 2788399 .. 2788409 -  -4.6  -3.13299   CCAGCAGACTCAAGA                 CAGG CTC CCCG                 GACGTGCCATCAACG  47 35
CX034_RS13520 2787509 .. 2787529 -  -6.7  -3.58905   AGCCCGCACATACAA            GGCGCGGCA AAA TGCCGCGTG            ACCTATAATTCGTTG  58 119
CX034_RS13515 2786946 .. 2786967 -  -2.1  -3.53012   CGCTGGTGCTGCAAA           CCG-TGGCGC TGG GCGGCGTCGG           CCTGCTGGGAGGATG  47 295
CX034_RS13480 NONE
CX034_RS13475 NONE
        maiA 2778968 .. 2778989 - -17.3  -5.67063   GGCACCAGAAAAAAA           GGGCAGCCC ATCC GGGCTGCCC            TTTTTGCTTGGGCGC 100 45
CX034_RS13460 2778563 .. 2778584 - -12.3  -5.09762   AGCGCAATACAAAAA           GCCGCTCAC TTGC GTGAACGGC            CCTTTTGTGTCGACG 100 77
CX034_RS13450 2776559 .. 2776579 -  -6.7  -4.14392   CGGCAACCTGGAAAA            GACACTGGC CGC GCCCGTGAC            CGTGATCGTCGCCCA  69 417
CX034_RS13440 2775220 .. 2775246 - -12.2  -3.85698   GGCCGCCCGGACAAA         CCGGTTTGGCGT CGC ACGCCAGGCCGG         CTGTAATGTCTTGAT  81 92
        scpB NONE
CX034_RS13425 2771042 .. 2771061 -  -9.3     -6.13   ACACTCAAAAAAAAA            TGGGCTG CACGCC CAGCCCA             CCGTATTGCCTGGCC 100 453
        rimP NONE
        nusA NONE
CX034_RS13410 NONE
        rbfA 2765532 .. 2765561 -    -5  -2.60341   AAGGAGAAAAAGCAG       CGACGA-CAGCCC GGTCA GGACTGGTCTTCG       GGCTCGTCGGGAACA  42 10
        truB NONE
        typA 2762863 .. 2762889 - -22.4  -4.65895   GGCTGCATGTAAAAA         GGGTTGTGGCCG CCA CGGCCACAACCC         TTGCGCTGGCACCGC 100 66
        polA 2758153 .. 2758178 - -17.5  -2.69151   GGCTGTCAGACAGTA         TCCGGCCGGCG CGGA CGCCGGCCGGG          GCCGCATCAGTGCGC  80 32
CX034_RS13370 NONE
CX034_RS13365 2756362 .. 2756387 - -21.9  -2.52676   GACGCGGGCAACTGA         GGGCCTGCCCG AGCA CGGGCAGGCCC          CGGCCCGCTACAGGT 100 33
CX034_RS13355 2752998 .. 2753049 -  -7.2   -4.8048   GGGGTAGAGGAAAAA CTCTAACCC-CGGGTGCCTGTCCCC GCA GGGGACTGGCACCCGCAAACTCCAA CCCCGGCGTGCCTGT  84 117
CX034_RS13325 NONE
CX034_RS13320 NONE
        parC 2738818 .. 2738833 -  -8.2  -3.22475   TTCACGCTCAGAACA              CCGGCG ACAG CACCGG               CTGCCTGGGACGCAC  58 2
CX034_RS13310 2737393 .. 2737427 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS13285 2733743 .. 2733771 -  -8.7  -3.29144   CTACGTGCTGGAGAA        CGGCCGGGTGGTG CTG CACGACACGGGCG        CCAACCTGCTGGTCA  59 157
        ugpB 2724568 .. 2724598 - -21.1  -3.18118   CCAGGTGAGAATACA       GGCGGCCGGCCGG TAATG CCGGCCGGCCGCT       ACAGGCACAGGCCAA 100 145
        ugpA NONE
        ugpE NONE
CX034_RS13220 2721538 .. 2721571 - -17.3  -3.44325   ACGTCGTACAAGTAA     GGCGCATGCGCGCGG CTCG CCGCGCACGGGCGCC      TGTCCCCGCTGCGGC  87 102
CX034_RS13210 2719519 .. 2719529 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS13205 2718309 .. 2718349 -  -3.1  -3.06261   TCGCAACCGCGAACA CGCG-CGC-CGCCTCGCCG CTGGT CGGCATCGCCTGCGTCGCG GTGGGCATCTTCTGT  42 191
CX034_RS13190 NONE
CX034_RS13185 2716638 .. 2716696 -  -2.9  -4.56597   GCCTTGCGCCAAAAA TCCCATTGTGCCGCAC-GGGCCGCGCGGC CGG GCCG-GTAGCCCTGCGCCCGGCAAGGGGA TCAGGCTGCCGCGGG  69 76
CX034_RS13180 2715724 .. 2715756 -  -9.7  -3.06671   AGATCGACCGCAACA      TGGCCATGCTGGGCG TGA CGCGCTGCACCGCCA      TGGCGCCCGGGCTGC  59 67
CX034_RS13120 2705987 .. 2706015 - -10.1   -2.9348   TGTAAATTTTACATA        GGGTGTGGCGCGG TCG CCGCGCCCTAGCC        GCCGTGCTGCGCGTC  59 20
CX034_RS13115 NONE
        arsC 2703896 .. 2703927 - -24.5  -3.90112   CGGCCGTCAACGAAA      GCGGCCTGGCGCG TCTTGC CGCGCCAGGCCGC       AATCACTCGCCCTCA 100 70
CX034_RS13075 2698655 .. 2698686 -   -10  -2.81547   CCTGCAGATCAACTA      TGCGCTGGACGACC GCCA GGCCGCGCAGCGCC       TGTTGCCGCTGGCCC  56 306
CX034_RS13045 NONE
CX034_RS13040 2693076 .. 2693119 -  -8.3  -2.51133   GAGTCATCCACGAAC GCGATCGAGGTGAGCAGCTCCA CGC TGGA-CTGCG--CCTCGACCGC CTGCATCACGTGCAG  51 258
CX034_RS12995 2673119 .. 2673176 -  -7.7  -3.07113   GATCAGTCCAGCCAA CGCAACCGGGGCCAGGGCGC-GCGCCGCT CGTG AGCCCCGCGGCGCCC-G-CCGCG-CTGCG CTATGTGGACGACAG  53 66
CX034_RS12970 2668762 .. 2668785 -  -8.8  -3.53012   GCCCGGCGCCGCAAA          GC-GATGGCGC AGG GCGCCAGCTGC          GGCGGCTGTTCGCCG  61 350
CX034_RS12945 2665688 .. 2665720 - -12.7  -2.73875   CCTCGGCGAACACCA     GGCC-GTCCGGCCC CAGTTC GGGCAGGACCGGCC      GCGCCGCGCCAGGCG  65 244
CX034_RS12935 2662091 .. 2662123 - -10.5  -3.05963   ACGTGCAGGTCAATA     CCCTGCGCGCCGCC CTGCCC GACGGCGCGC-GCG      TGGGCACGGTCGACA  59 285
CX034_RS12920 NONE
CX034_RS12915 2656157 .. 2656172 -  -4.6  -3.41051   CTACTTCGACGAGAA              CCGGCG CTTC CACCAG               GCCATTGCCGATCTC  52 291
CX034_RS12905 NONE
CX034_RS12900 NONE
CX034_RS12895 2651672 .. 2651684 -  -3.3  -2.64243   GGATATGCGACAGCA                GCTTC ATG GACGC                GGCTCCTGCGGGGCT  39 16
CX034_RS12890 NONE
CX034_RS12885 2649100 .. 2649124 - -13.5  -3.21416   CAGCGCCATGAGCAA          GGCCGGGCTGG ACG CCAGCCTGACC          GCCGTCGGCCCGCCG  72 427
CX034_RS12865 NONE
CX034_RS12860 NONE
CX034_RS12855 2643117 .. 2643153 -  -9.4  -3.02511   GGTAGCCGGCCAAGA   CGGACGGTATCTGTCCC CGCA GGGACAGCCAGCG-CCG    GCGACGGGCTACTTC  57 34
        flhB 2636819 .. 2636858 -  -3.5  -3.67296   CAGCACCGAGGGAAA  CGCGGCGAAATCCA-GCG GCTTG CGCGTGAACATCGCCACC  AGCAGGATCATCACC  54 199
        flgB NONE
        flgC NONE
        flgD NONE
CX034_RS12780 NONE
CX034_RS12775 2626799 .. 2626829 -  -2.2  -4.32034   GCATCATGATGAAAA       CTCCTGGCGCGGCG CTT CGGCGCGCGCGTTG       ATAATCAGCTGGCCG  65 30
        flgG NONE
CX034_RS12765 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 2619801 .. 2619826 -   -14  -3.05384   CCGCTTTCCATCGAA         CACGCGCTCC TCGAGG GGAGCGCGCG          CCATTTCCCGACTAC  72 57
CX034_RS12740 2617924 .. 2617935 -  -2.2  -3.68853   GCAAAAACCGCCAAA                CAGA ACTA TCCG                 GCCGCCATTTCGCCC  51 49
CX034_RS12735 2616117 .. 2616152 - -22.6  -4.56597   CGCTGCCTGTAAAAA    GACGATCCGGCGCGGC GCTG GCCGCGGCGGATCGCC     GCTTTCCCGTCCTGG 100 92
CX034_RS12730 2614561 .. 2614576 -  -4.6  -3.78419   GGAGGAAAGATACAA              GGCACC CAGC GGCACC               CGACGGCACCCGACG  58 47
CX034_RS12725 2613319 .. 2613345 -  -2.9  -3.90744   CTGGCGGGCAAATAA        CCCCTTCGGG TGCCTGTC CCCGC-GGGG         ACAGATACCGTCTTG  58 45
        fliE 2599972 .. 2599993 -  -7.2  -2.88544   CTGGATGCCCATATA           CCGCCGCA ACTCTA CACGGCGG            TGGCCGAGCTGCTGG  50 518
CX034_RS12600 NONE
CX034_RS12595 2593281 .. 2593297 -  -3.5  -3.31415   GACGACGAAATCGAA              GCCGGTC ACT GTGCGGC              GATGAAACCGTTGTC  47 14
CX034_RS12590 NONE
CX034_RS12585 NONE
        rpsB NONE
CX034_RS12555 2583880 .. 2583914 - -13.5  -3.83144   GTAAGACAAGAAATA    GGCCGGC-AGTTCGGG AAGC CCCGCCCTGGCCGGCC     CCTACGATGACGCGT  83 40
CX034_RS12550 NONE
CX034_RS12545 2582488 .. 2582539 - -10.8  -3.10344   CGCGTACGGAACAGA TTCCGATATCGACACCGGAGCCGT CGAT ACGGCCCCGATACCTCAACCGGAA TTATACGGTCATGAT  64 26
        uppS NONE
CX034_RS12535 NONE
CX034_RS12530 2579522 .. 2579550 - -10.1  -3.59979   CGGGTGGACGCGAAA        GGCGGCCCGGCGC GTC ACGCCAGGCCGAG        ATTGCCGGCGAATGA  67 11
        rseP NONE
        bamA 2575700 .. 2575733 -  -2.9  -3.72893   TATTGTGCCACTAAA     CTGCGGGACGGCCGG GCAA CCGGCCATTTCCCAT      GTTTTCATGCGTAAC  53 65
CX034_RS12515 2575070 .. 2575080 -  -2.4  -2.64218   AGGGTCCAGCAGAAC                 CGGC ATG GGCG                 TGCTTATCGGCCCAG  38 29
        lpxD NONE
        fabZ NONE
CX034_RS12500 NONE
CX034_RS12495 NONE
CX034_RS12490 NONE
CX034_RS12485 NONE
CX034_RS12475 2566717 .. 2566737 -   -14  -5.40072   GCCCGGCGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTTTCCTGCTGCCG 100 46
CX034_RS12465 2565392 .. 2565411 - -10.6  -3.09015   TTCACAGCTAGTGAA            GCCTGCCG TCGC CGGCGGGC             AAGGTCATGGTTACG  64 36
CX034_RS12455 2563359 .. 2563382 - -17.4  -3.59979   GGCGCGGACGCGAAA          GGACGCGCCG CGGC CGGCGCGCCC           GGGTCGAACCTCACG  89 36
CX034_RS12450 2562145 .. 2562165 -  -9.7  -3.67622   CAGCGCGAAAAGGAA            CGTGTCCTG AAG CACGACACG            CGCGTCAACCAGCGC  68 30
CX034_RS12440 NONE
CX034_RS12435 NONE
CX034_RS12430 2559716 .. 2559729 -  -2.4  -2.62616   GGACGCTCGACATGA               CGTT AACGTA AACG                TAAGTCGTTGGCGAG  38 129
CX034_RS12425 NONE
CX034_RS12420 NONE
        mmsB 2556331 .. 2556347 -  -4.3  -3.08464   GTATCAGGCATGCAA              GCCTCTC GCG GAATGGC              CCTGGCCGCCCGGCC  47 50
CX034_RS12410 2555875 .. 2555902 -  -6.8  -2.90075   GGCGCGCCAAGTATA        GGCCGCCGCGCC GTTC AACGCGGCGTCA         CCCGCACCGCGGTCA  50 12
CX034_RS12405 2554927 .. 2554961 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 204
CX034_RS12380 NONE
CX034_RS12375 2547387 .. 2547414 - -14.2  -6.15828   GGCACCAAAAAAAAA        CCCATCC-CGGCA TGG CGCCGTGGATGGG        GCGGACGTTCGAGGC 100 47
CX034_RS12345 2540766 .. 2540776 -  -4.6  -3.07113   CACCAGGTCATCCAA                 GCCC ACT GAGC                 CCCCTATTCGCGAGT  45 156
CX034_RS12340 2540455 .. 2540465 -  -2.6  -3.57144   CGCGCCACCTGGAAA                 TAAT CGG ATTA                 CATCTGCAAGCGCTG  48 23
CX034_RS12335 2539374 .. 2539393 -   -10  -4.07568   GGCTTCGCGCGAAAA            CGGGGTTA CGGT CAACCCCG             ATTATGACACTGCCG  78 27
CX034_RS12330 NONE
CX034_RS12325 2537375 .. 2537423 -  -8.6  -2.62184   GGCCGCTGGACACCA CGATCGCGCGC-CTGGCCGCGCC CGTC AGCCCGGCCTGAACGCGCGGCCT ATTTGGCGGCCTGGC  52 24
        apbC NONE
CX034_RS12300 NONE
CX034_RS12295 NONE
CX034_RS12290 NONE
CX034_RS12285 2529660 .. 2529677 -  -8.4  -3.29829   TATAGCTTCCGACAA             CCGCAC GCCATG GTGCGG              TGCCCGCATGCAGCA  58 88
CX034_RS12280 2529364 .. 2529378 -  -5.6  -3.13403   TCTTGGTCAGCAACA               TGCCGG GCT CCGGTA               TCAAACGAGGGTGGT  49 26
CX034_RS12275 2525876 .. 2525898 -  -3.2  -3.01712   CGCGGGTGCGGAAGA           TGTCGGCCAC CAC GTCGCCGTCG           CCGGCCAGCAGCGCC  42 522
CX034_RS12265 NONE
CX034_RS12260 NONE
CX034_RS12255 2523902 .. 2523952 - -10.2  -3.61398   TTTCGCGCGCAAGAA GGTCCGGCGCAC-GCGCCCGGCC TGAGGC GGCCGGACGCCGCGCGGCTTGCC GCCCGGGCTACTGGC  67 33
CX034_RS12240 NONE
CX034_RS12235 2520276 .. 2520296 - -16.9  -4.07687   ACGCCCCGTGCAAAA            GGCCACGAG TGT CTCGTGGCC            TTTGGATTTCGTGCT 100 121
        leuC NONE
        leuD 2517991 .. 2518027 - -18.6  -3.37556   GGGAAAACAAGGCAA    GGGCCCGCCGCGCGCG ATCAA CGCGGACGGCGGGCCG    GCAGGCAACGCGTCA  93 38
        leuB 2516818 .. 2516834 - -10.1  -4.58685   AAATTGTGCGAAAAA              GCCGCAA AAA TCGCGGC              CCTTGCGCACAGTGG  93 73
         asd 2515498 .. 2515554 - -11.8  -4.07568   CCTTGCCGTCGAAAA CGGCGCGCCT-GC-G-A--CAAGGGCGCC CGCG GGCGCCCTTGTATCCTGCCATGCGCGCCG GCGCCGCGCGTCAGG  82 36
CX034_RS12210 NONE
        truA 2512878 .. 2512890 -  -4.7  -3.61398   CTGGGTGTGGAAGAA                TGCGC TGA GCGCG                GACCGTTTGCGTAAA  52 130
CX034_RS12200 2511751 .. 2511767 -  -6.5  -3.53012   CGCGTCGCGTCGAAA              CGGGG TTATTTG CCCCG              CGCCACCGTCGCCAT  56 14
CX034_RS12195 NONE
CX034_RS12190 NONE
CX034_RS12185 NONE
CX034_RS12180 2508406 .. 2508426 - -15.5   -5.1101   CGATCAGGCAAAAAA            CGCCAAGTC AGC GACTTGGCG            TTTTCCGTTTCGATA 100 62
CX034_RS12175 NONE
        yaaA 2506306 .. 2506343 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
CX034_RS12165 2504608 .. 2504622 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  61 494
CX034_RS12140 2500401 .. 2500428 -  -7.6  -3.88291   GATGACTCCTAGAAA        CGGGCCGCATTG TACG CGATCCGACCCG         AGTTGATCTCAATCC  66 34
CX034_RS12135 NONE
        plsX 2499092 .. 2499108 -  -4.4  -3.14211   AGCTTTTTCCATCAA             GCGG-TG TCCC CAGCCGC              GCCGGGCGCGACGGC  47 5
CX034_RS12125 2498055 .. 2498102 - -11.9  -2.50816   TCGGTATGGAGGAAT GGCGG-CGTGCGCGGT-CGCGCA CAGG CGCGCGCAGCGCGCCCTTCCGCC TACATGCGGGCCAGC  61 25
        fabD NONE
        fabG 2496290 .. 2496323 - -12.3  -4.03234   GCGTTTCCACAGAAA     CGCGCGGCTGGGC TTGGATGG GCCGCGCCGCGCG      CTTCTCACTATTGCA  83 33
CX034_RS12110 2495842 .. 2495862 -  -4.5  -3.55563   ACGGCATTCCTGAAA            CCGCCCCGA TTC CCGGCGCCG            CCCCGAAGTGTTCGA  52 72
        fabF 2494472 .. 2494506 -  -6.5  -3.69216   CGGTTATCGAAAATA    CCGC-CGTCCGGGTTCA ACT CAAACCCG-ACGAACGG    CCATCGAACCGTTGG  59 9
CX034_RS12100 NONE
        rpoE NONE
CX034_RS12090 2492871 .. 2492884 -  -2.3  -3.54408   GCGCATGTAAAGCAA               CGGTG TCAT CAACG                TCCTGCTCCGGCGTC  48 20
CX034_RS12085 NONE
CX034_RS12080 2490235 .. 2490259 - -22.9  -4.65895   CGGGCGAGCCAAAAA          CGAGGGGGCGC CAT GCGCCCCCTCG          TTGCGGCAACCAGCC 100 62
CX034_RS12075 NONE
        lepB 2487474 .. 2487487 -  -3.7  -3.17392   TAGCGGTCAATGGAA               GCGGC CAAT GCGGC                TCAAATCGCTGAAGT  45 3
CX034_RS12065 NONE
CX034_RS12060 NONE
        recO NONE
CX034_RS12050 2484133 .. 2484159 - -15.9  -3.14344   GATGTCGCGGACGAA        CAG-GCCGCGCG GGCC CGCGCGGCGCTG         GGCGCGCTGGGCATC  80 157
        lptF 2475456 .. 2475481 -  -6.1  -3.01791   ACGTGCTGCCCAACA         GCCAGGTGGTGC TGC GCAGCACC-AGC         GTCATCGCCCAGTAC  48 280
CX034_RS11995 2473350 .. 2473363 -  -2.3  -3.14132   CTTGCCGCCGATCAA               TAGCG ACTT CGCTC                ATTTCTCTGCTCCTC  42 124
        mmsA 2471787 .. 2471810 -  -8.2  -3.15544   CTGCAGGTTCATGAA          TTGGCCCCTGT TAG AC-GGAGCCAA          TTATAAGTAATATAG  56 98
CX034_RS11985 2470630 .. 2470664 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS11975 2469164 .. 2469181 - -14.1  -4.41895   AAGGCCCAAGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTTGGGCCTC 100 77
CX034_RS11960 2465626 .. 2465672 - -21.5  -2.62184   TGCTGGTGTAGAGCA GCCGGCGCTTGCCGGCGCGCGC ATCG GCGCGCG-CGCCCAGCGTCGGC ATGGTCAGCATGATG 100 294
         acs 2462309 .. 2462339 - -14.7  -4.17089   TGCAAAGCCGGAAAA      GGCACGGGCCGGTC ATGC GACCGGCCCG-GCT       GGCTACAGACTGACG  95 101
CX034_RS11945 NONE
CX034_RS11940 2460328 .. 2460353 -   -14  -3.28712   GCGGGCGGCTGAGAA         CGC-GCCGCGC TCAGC GCGCGGCCGCG         CAATGCCCGCGTACC  75 10
CX034_RS11915 2455180 .. 2455219 - -14.2  -3.62597   GGTACGCGTGAAGAA  GGCCGGAATGCCG-GCGCC GCC GGCGCGCAGCTTCTCGGCC  AGCGTGCCCTGCGGC  80 439
CX034_RS11905 2454123 .. 2454140 - -14.1  -5.75945   ATGGGCGAAAAAAAA             CGCCGGC TAAC GCCGGCG              CCTTACATACAAAAA 100 51
CX034_RS11900 NONE
CX034_RS11895 NONE
CX034_RS11890 2450110 .. 2450133 -  -2.3  -4.71426   GGTTGAGGAAGAAAA          TGCGGCAGGC GCCAA GCC-ACCGCG          TTCAATACGCGCCGC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 2446562 .. 2446619 - -13.4  -3.48276   CGGCCCTGGAGATAA CAGGGC-CGCCGCGCGGGC-GGC-CCG ACCGGCG CGGCGCCTGCATGCGCCGCGCGCCCTG CCCTACTTGCGGTCT  75 28
CX034_RS11870 2445462 .. 2445474 - -10.5  -3.38291   GGGAGAATGTCAGAA                GGCCG TCT CGGCC                AGCCACTGGCGCCAC  65 7
CX034_RS11860 2442638 .. 2442648 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 194
CX034_RS11855 NONE
CX034_RS11850 NONE
CX034_RS11845 NONE
CX034_RS11840 NONE
CX034_RS11835 2437410 .. 2437456 - -14.3  -3.09581   CAAACGCGGAAGACA GCGGT-TTCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGATTACTGA CCATTAACGCAGGTT  73 29
        ftsB 2436982 .. 2436997 - -10.4  -5.86332   CCAAGGCAAAAAAAA              CTCCCC TGGC GGGGAG               TGTTGGCGCGTCCGG 100 50
CX034_RS11820 2434429 .. 2434449 -  -4.5  -3.04792   TGATCAGGCGCAAGA            GCGGCGTCA TTG CGGCGCCGG            GGAGCGACTGAGCCA  45 11
CX034_RS11815 NONE
CX034_RS11810 2433184 .. 2433211 -  -6.2  -3.39784   CCAGGCCGAACAACA        CGCGCAGCGCCTG GCC CAGG-GCTGGCCG        GGCGGAGCCGGGCCG  55 294
CX034_RS11730 NONE
        sdhC NONE
        sdhD NONE
CX034_RS11715 NONE
CX034_RS11710 2412113 .. 2412123 -  -6.8  -3.01906   CCAATAAACACTAGA                 CCGT ACG ACGG                 ACCATCAGTTCCTTG  51 10
CX034_RS11705 NONE
CX034_RS11700 2410449 .. 2410462 -  -9.5   -5.4505   GCCGGCAAGAAAAAA               CCGCC CGAA GGCGG                TTCTTTCAGTGGACG 100 54
CX034_RS11670 NONE
CX034_RS11665 NONE
CX034_RS11660 NONE
CX034_RS11655 NONE
        potA NONE
CX034_RS11645 NONE
CX034_RS11640 NONE
CX034_RS11635 NONE
CX034_RS11630 2396055 .. 2396073 -  -5.2  -4.36914   TGCTGGCCGAGAAAA             TCACCGAC GCG GCCGGCAA             CATGGCGCCGACGGT  69 331
        rmuC 2394120 .. 2394159 -  -5.5  -3.90744   TTGGCGGCGAAAGAA  TTGGGCGGACCGCCCGCC CCGCC GG-GGGCTCTCCGCCCCC  GCGCCTGCTCCTCAG  63 37
CX034_RS11615 2392443 .. 2392457 -    -7  -2.96984   GAAATTTAGCAGATA               CCGGGC CAG GCGCGG               GCCAGAATCGGGGCC  51 1
        rpiA 2391590 .. 2391618 -  -5.2  -4.07885   TAGTGCCCCTGAAAA       CGCGGTTGCGCAG AGGG CTGCCCGACC-CG        CAAGGTTATGACCCG  64 106
        phoU 2390569 .. 2390624 -  -8.1  -3.05596   CAGGCGCGGATTGAA TCGGCCTA-TGGCGAGGCGCCCG-CGC TGCT GCGGCTGGCGCCGGGCGAGCAGGCCGC CTGGCCATATGAACC  52 166
        hrpA 2383002 .. 2383042 - -17.6  -3.57263   ACTGGCACCCGCAAA CTCTCGGGGTGCCTGTCCC CGCA GGGACAGGCA-CCCGTGGG  ACAGCCCCCTACCGC  90 34
CX034_RS11575 NONE
CX034_RS11570 NONE
CX034_RS11565 NONE
CX034_RS11560 NONE
CX034_RS11555 2374330 .. 2374361 - -13.6  -3.04144   TGTTCATCTGGAACA      GTCCCGCCGCGCCG GCCC CGGCACGGCGCGAA       TACGACGCGCCCTAT  69 250
CX034_RS11545 2371897 .. 2371914 -    -4  -3.76641   AGCGCAATACGCAAA             CGTCGC TTATCC GCGGCG              GCGCCTGTCTTCATA  57 14
CX034_RS11540 2370333 .. 2370361 -  -2.3  -3.27743   CATCATCAAGGAATA       CGC-CGGCCTGT TCGTCT ACTGGCTGCGCG        GCTGGGTGTAACGGC  44 438
        msbA 2366604 .. 2366620 -  -6.5  -3.53012   TGGCCGCCGCCGAAA              CCATGGC GCC GCAATGG              GCGCAACAGGTGTTG  55 148
CX034_RS11510 NONE
CX034_RS11505 2363337 .. 2363350 -  -3.7  -4.74103   GGCCGAACTGAAAAA               GGCGC TCTC GCGCG                ACCGCACGCGCATGA  77 418
CX034_RS11485 NONE
CX034_RS11480 NONE
CX034_RS11475 2358563 .. 2358601 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  64 72
CX034_RS11470 2355328 .. 2355338 -  -6.8  -3.65314   TTGAATTTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 2355119 .. 2355153 - -19.5  -4.59773   GCGTACCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CX034_RS11460 2351965 .. 2352018 -  -6.6  -3.76224   TGCCCATCTACGAAA CCGCCGCCCTGCTGCGCAGCGC-CGGC ATC GCCGTACCCTGAGC-G-ACGCCGGCGG CGCGCGGTCACCAGC  62 33
CX034_RS11420 2345083 .. 2345115 -  -4.6   -4.1899   CCAGTGTATGCAAAA      CGCGGCGGCCGTCA CAATC TGCCGCCTGCCGCT      CAGCGTCGCCGCGAC  66 25
CX034_RS11415 2343595 .. 2343617 -    -9  -3.03441   CATCACCGCCGAACA           GGTGCGCGAC ATG GTCGCGCGCT           TTGCCCGCACCCTGG  55 107
CX034_RS11405 2340796 .. 2340854 - -15.8   -3.6106   TGGAATATGTCGAAA GCGGCCGGCGCGAAGGCGCGCGGCTGC GCATGG GCGG-CGAGCGCGTGCGCGCCGACAGC GGCGGCTACTACATA  85 396
CX034_RS11370 2333307 .. 2333336 - -18.5  -3.09492   TCGCCAACGGCAAGA       CGCGCGCCCAGGC CGAA GCCCGCGCGCGCG        AACTGCTGACCCTGG  85 432
CX034_RS11345 2326572 .. 2326620 -    -8  -3.67296   CATTATCGATCCAAA CGGCGCGCGCGGCCAAGCGCGGGC CCA GCCGGCG-TCAGGCGC-CGCTCCA GGCCTCGGCGTTCAG  63 11
CX034_RS11340 2325372 .. 2325410 -  -8.7  -3.03159   CCAAGTCCGCCAAGA  GCGCGGGCGGCGGCGCGGC CGA GGCG-GCGGCCGGC-GCGC  ACTGAGCGCCAGGCC  55 49
CX034_RS11310 NONE
CX034_RS11305 2317551 .. 2317570 - -16.4  -4.18018   GTCCGCCAGCGAAAA            CGCGCCCC GCAA GGGGCGCG             TTTTGCATGAGCCAA 100 54
CX034_RS11290 2314267 .. 2314281 -    -7  -3.01924   GACGCTGGCCGAACA               GGGCGG CGC CGGCCC               GCACCTGATTACCGC  52 478
CX034_RS11275 NONE
CX034_RS11270 NONE
CX034_RS11265 NONE
CX034_RS11260 2308316 .. 2308347 -   -10  -4.07568   CTGCTTCCGGGAAAA      TGGGCGGGCCGCCGC CGT GCGG-AGCCCGCCGC      CGATGCGGGATTACT  78 36
CX034_RS11250 2306662 .. 2306706 - -15.6  -3.17075   CGCCGGGCAAGGCAA GGCGGCC-GAGCTGCTGGCGC AGGC GCGCCAGCTGGCCTGGACGCC GCTGGTCGACGCCGA  77 197
CX034_RS11235 2303501 .. 2303522 - -15.1  -3.01712   CGCGCTGGTCGAACA           GGCCGCGGC GGCG GCCACGGCC            ATGGAAGAACAGGCC  74 197
        greA 2300693 .. 2300713 -  -9.6  -3.07104   CGACAACGATACAGA            CGCCCGGC GCACG GCCCGGCG            TTCAGGAATTCGGAT  57 238
CX034_RS11215 2298660 .. 2298697 -  -7.5  -3.16742   CTGAACGCTCACGAA   CGCGACCTGCGCAGCCGC CTG GAGGC-GCTCAGCGCGCG   CGGAGACGGCGCGGT  53 203
CX034_RS11170 NONE
CX034_RS11165 NONE
CX034_RS11160 2290994 .. 2291007 -  -3.1  -3.17444   GGAGAAACAGACATA               TCGAA CCTC CTCGA                ATTGAAATCTTGACG  44 58
CX034_RS11155 NONE
CX034_RS11150 NONE
CX034_RS11145 NONE
CX034_RS11140 NONE
CX034_RS11135 NONE
CX034_RS11130 NONE
CX034_RS11125 NONE
CX034_RS11120 NONE
CX034_RS11115 NONE
CX034_RS11110 NONE
CX034_RS11105 NONE
CX034_RS11100 NONE
CX034_RS11095 NONE
CX034_RS11090 NONE
CX034_RS11085 NONE
CX034_RS11080 NONE
CX034_RS11075 NONE
CX034_RS11070 2276824 .. 2276846 - -14.2  -2.70932   GCGCTGCGCGAACGA           GGCTACGACA GCG TGCCGTAGCC           CCCCTGCCCGGGCCA  69 44
CX034_RS11055 2274629 .. 2274643 -  -5.6  -3.59262   GCCGAGATCGCGAAA               CGGCCT TGC AGGCAG               GCGATGCAGCAGGTC  54 514
CX034_RS11035 2267685 .. 2267701 -  -5.1  -2.78463   ACCTTGCGCAGCACA              TTGTGCG CGA CGCAGAA              CCTGCCTGCCGGCGC  43 398
CX034_RS11020 2265760 .. 2265810 -  -5.5   -3.7108   AGCTGGACACCGAAA TCTACG-ATCG-TGAGCTGGCCG GCTGGAT CGGGCAGCGCATCGACGCGCAGA TCCGCCACGCGCGGC  58 123
CX034_RS11010 2264176 .. 2264198 -  -4.1   -5.4505   CCGCCCAAGAAAAAA          GCACCC-GGC TTGC GCCTAAGTGC           CTGTTTTCAAACGAA  90 47
CX034_RS11000 2261008 .. 2261048 -   -11  -3.53012   GGGTCCCGGGCCAAA  GCGCGCAGATCCCGGCCG TTACC CGGCAAAAGCCTGCGCGC  AGGCCGCGCGCCCGT  70 65
CX034_RS10995 2260357 .. 2260391 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS10965 NONE
        ectA 2251939 .. 2251949 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS10955 2250899 .. 2250921 -  -6.2  -2.78463   AGCGTGTGCATCATA           CGGCGCCA TTGTACG TGGCGGCG           CGCCGGATGCCCCCT  47 39
CX034_RS10950 2250286 .. 2250331 - -11.7  -3.04144   CGGCGAGGGCGAACA GGCCTGAGGCCGCGCGGGCCTG GCT CAGGCCTGCACGTCC-CAGTCG CCGCGCCCGCGGGTG  65 4
        tsaD 2245885 .. 2245903 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 204
CX034_RS10915 NONE
CX034_RS10910 NONE
CX034_RS10905 NONE
CX034_RS10900 NONE
CX034_RS10895 2239972 .. 2239999 - -15.5  -3.75153   GCGCGCCAACGCAAA        CGTCCCGGGGC GTTGCA GCCCCGGGGCG         TCATTCCTGCGGATC  85 49
CX034_RS10890 2238926 .. 2238979 - -14.8  -3.55444   GGGCCATGCCGGAAA CGGCTGTCCGAGCGGACGCCCCGTCC CCCACC GGACGGGACGTCC-C-CGG-CAG-CG CCTCAGAAGGTCCGC  81 28
        rlmD 2237424 .. 2237455 -   -18  -3.25169   CGAAGAACTGAGCAA      CACCGGGCGGCG CTGAACGC CGCCGCCCGGCG       GGCCGCCTCAGGCAG  89 33
CX034_RS10875 2236589 .. 2236642 -  -4.3  -3.52877   ATGAAGAGATGATAA TTGTTAGCTATCAATTAATAAAATTT AAT AAATCTAATTAATTGATAG-TCTCAA GCAATCGATCGCTAA  52 48
CX034_RS10870 2235768 .. 2235791 -   -21  -4.32201   CGAAGGAAGGGAAAA          GCCGGCGGCG GCAG CGCCGCCGGC           CAGGCATCAGGCCAG 100 32
CX034_RS10865 2234084 .. 2234104 -  -8.1  -3.53811   CTGACCGTGCGCAAA            CCCGCCGCC GAC GGCTTCGGG            CTGCACGGCAGCGGC  60 170
CX034_RS10850 2230285 .. 2230331 - -20.3  -4.87626   GCCGAACAGGAAAAA GCCCGGCTGGTGCCG-TTCCTC ATGG AAGGAATCGCCACCAACCGGGC CATGTTCCAGGCCGA 100 116
CX034_RS10840 2229051 .. 2229061 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS10830 2228029 .. 2228068 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CX034_RS10820 2226714 .. 2226755 -  -7.9  -3.89354   GGTCGAAACGAACAA TGGCGTGGTGACGCTGACCG GCA CGGTCGGCACCGCCAC-CGA GGCGGATCAAGCAGC  67 268
CX034_RS10785 2217502 .. 2217537 -   -19  -3.14132   CTGTCCCCGCAGGAA    TCCTGGTGCCTGTCCC CGCT GGGACAGGCACCCGGG     CACTCGGGCACCCGG  90 50
CX034_RS10775 2215433 .. 2215454 -  -2.1  -2.87132   GGCCGCCCGCAGACA           TGCCCGCGC CGTT ACGCCTGCA            ACAAGGCCCGCAGTT  40 15
CX034_RS10770 2214135 .. 2214163 - -10.1  -2.77994   CAGAAATTGCAACCA        TTTCCGCGCCGCC CTC GGCGGCGCGCCGA        ACCCGGCCGGCGCTA  57 38
CX034_RS10765 NONE
CX034_RS10760 NONE
CX034_RS10755 2212066 .. 2212081 -  -6.2  -4.83722   AACAGCAGAATAAAA              TTGCAT AACC ATGCAA               CTTGATGCCATAGAC  86 490
CX034_RS10745 2210643 .. 2210658 -  -8.2   -3.4247   AGAAGCTGAAGAAGA              CCACCG AAGG CGGCGG               CGCGCCGGCGCTGGA  61 343
CX034_RS10720 2203237 .. 2203247 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS10715 2201816 .. 2201826 -  -2.4  -4.06419   TTTTGCTACAAAGAA                 CCGG CTA CCTG                 TATGCTGACACCCTG  58 432
CX034_RS10705 NONE
CX034_RS10700 2198047 .. 2198101 - -15.8  -2.61383   ACCGCTATTGAGAAT GGCCC-TGC--CGCGTCTTGCGCCAGC CGAT GCGGGCGCAAGACGCGAAGCTCAGGCC GTGATGATGTCCAGC  74 19
CX034_RS10665 2188649 .. 2188668 -  -7.1  -3.42354   CAGGTCAAGGCAGAA            CTGGCCC AGGCCA AGGCCAG             CGGCCAATACACCTT  58 290
CX034_RS10655 2186705 .. 2186726 - -14.4   -2.6155   CCTGGGAAGACCAAC           GGGCCGCC ATTATA GGCGGCCC            CGCGGCGCGGCCCGG  69 45
CX034_RS10650 2186368 .. 2186394 -  -7.9  -5.06816   ATTGTCCAAGAAAAA        GCCG-GCGCGCC CGAT GGCGCGCTCAGT         GCGTCAGATGGCGCC  88 21
CX034_RS10645 2185796 .. 2185807 -  -2.2  -4.05004   GCAGTAGAACAATAA                CGCGG ACG CCG-G                AGAAGGCACGGCACT  58 246
CX034_RS10640 2185480 .. 2185495 - -11.8  -4.93547   CCAAGCAATGAAAAA              GCCCCC TGGC GGGGGC               TTTTATGGACGCGCT 100 48
CX034_RS10635 2184622 .. 2184632 -  -3.2  -3.77808   GCGACCAGAACACAA                 GACA CCG CGTC                 GCTTGAAGATCTCGC  56 261
CX034_RS10630 2184230 .. 2184255 - -16.9  -5.06414   GGCGCGCAACAAAAA         GCCCCACTGCC GCGA GGCAATGGGGC          TTTTTTCATGCGGCC 100 92
CX034_RS10620 NONE
CX034_RS10615 2181408 .. 2181434 - -14.4  -3.01924   TATCTCTGGTGAAGA         CGCGCCAGCC GGATGAG GGCCGGCGCG         ATCAACGCTTATCGA  72 78
        clpX 2180023 .. 2180057 - -19.6  -3.05819   CAGATAGCGGGAAGA     TGCAAAAAAACCCGTT ACA AACGGGTTTTCTTGCA     ATGGCGGCCGGGATC 100 46
CX034_RS10605 2177378 .. 2177402 - -22.9  -5.45726   GATAGCCGAAAAAAA          CCGGGCCCGGA TGA TCCGGGCCCGG          TTTTGCGGGTCGCTG 100 59
CX034_RS10595 2174882 .. 2174898 -  -7.2  -4.21827   TGAAACACGGGAAAA              CCGCCG GATCG CGGCGA              TGGCGCGCGGGCTCA  72 38
CX034_RS10590 2173878 .. 2173898 -  -2.4  -3.16564   TTTTCATGGCATCAA            TCCGCCCG TACGC CGAGCGAC            TTGGCCAACGGCACC  42 1
CX034_RS10585 2173417 .. 2173430 -  -2.3   -2.6563   GCGCTCAATAACGCA               GTTGC ATCA GCCAC                TCGGCCACCATCGCC  38 1
CX034_RS10580 NONE
CX034_RS10575 NONE
CX034_RS10570 NONE
CX034_RS10565 2170082 .. 2170109 - -11.3   -3.1876   AAGCCCATCCACGAA       CGCGCGC-GCCGG TCGG CCGGCAGCG-GCG        GCAATTCGGCCTTGA  64 125
CX034_RS10550 NONE
CX034_RS10545 NONE
CX034_RS10540 NONE
CX034_RS10535 2165660 .. 2165676 - -13.7  -3.65812   GGTGGGGCAATACAA              CGTGGCC GCC GGCCACG              CCGCGCTGAAGGCTC  80 47
CX034_RS10525 2163781 .. 2163810 -    -2  -3.64703   TGCGGGGCATGTAAA       TCCCA-GCGCCGG GGTTG CCGGCGGGCGGCA       GCGGCTGCGCGTGCG  51 392
        uvrB 2158488 .. 2158502 -  -3.5  -2.70932   GCCTGTTTGTAACGA               GCGAA TTTTC TCCGC               TAATTTCCGTCTTTC  41 47
CX034_RS10500 2157694 .. 2157709 - -11.8  -5.00616   CTCGGTCGGAAAAAA              CCGCGC AGTC GCGCGG               TTTTCTCATTTTGGG 100 96
        iscR NONE
CX034_RS10490 NONE
        iscU NONE
        iscA NONE
        hscB 2154459 .. 2154479 -  -2.4  -3.32844   CGCGGCACCGCACAA            GCGGGTCA TCGGT TGCCGCGC            ATCGGGCCGGCCGCC  44 81
        hscA NONE
         fdx NONE
        iscX 2151941 .. 2151975 - -24.4  -3.53012   CGCGCGGCCCCGAAA     CGACAAGGGCCCCGTC CAT GACGGGGCCCTTGTCC     GGGCGGCGCGCCGGC 100 48
CX034_RS10455 2150780 .. 2150814 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS10440 2147888 .. 2147907 - -12.1  -5.60993   CGGGCCATAAAAAAA            CCCCGCG GGGGTT CGCGGGG             CTCAAGCCAAACGCA 100 66
CX034_RS10430 2145095 .. 2145118 -  -9.4  -3.15249   GATACCGTCGATCAA          GCCGTCGCGC GCCA GCGCGCAGGC           CGTGGTGACGTAGCG  59 364
CX034_RS10420 2143445 .. 2143469 -  -7.2   -3.4072   GACCTGGCAGGAGAA          GGCGTCAA GAATAGCAG TTGACGCC          GGCCGGCACGAAATG  56 54
CX034_RS10415 2142560 .. 2142573 -  -2.3  -2.70354   GGGGCTAGAAATCCA               GTTCG ATCT CGACC                GCGTCGCCCACGCGC  38 1
CX034_RS10410 2142014 .. 2142041 - -10.5  -2.55253   ACGAATCGGAAGTGA        CCGCG-GCGCCC TTGCC GGGCGCGCGCGC        AACGGCCGTCAGGCC  57 34
CX034_RS10405 2140880 .. 2140922 -  -7.7  -5.59357   ATGACATTAAAAAAA GGGCGGTATCCATTTGCACGC GCC GCGTGTGA--GGATGCCGCCC CGGGTTCCCGCGCCG 100 49
CX034_RS10400 NONE
CX034_RS10395 2138112 .. 2138130 - -17.4  -5.78622   GTACGCCAAAAAAAA             CCCGGGCC AGC GGCCCGGG             TCTGTTGCGTCGCCT 100 47
CX034_RS10380 NONE
CX034_RS10375 2135208 .. 2135220 -  -6.2  -3.30124   GTTGAGTTGTTATAA                GCGG ACTGA CCGC                TTTCAGCCGGGCGAA  53 28
CX034_RS10370 2133554 .. 2133611 -  -3.1   -4.2679   GAATTTGCACGAAAA CGATCTCCTACGT-GCTGCGCGGCGCCA TGG CGGCGCCGCGCGGCGACTCAGTTCTTGG ATATTCCCCAGAATA  63 15
CX034_RS10365 NONE
CX034_RS10360 NONE
CX034_RS10355 NONE
CX034_RS10350 2128742 .. 2128760 - -17.4    -5.252   CATGGCCATAAAAAA             GGCCGGCC AGC GGCCGGCC             CGCAGCGCGTCGCGC 100 42
CX034_RS10340 NONE
CX034_RS10335 2124995 .. 2125015 -  -3.2  -2.62616   TCAGGGCCGATACCA           GCGCTGGCA GGAA TGCCC-CGC            TAGGAACGGGAAGTC  39 25
CX034_RS10330 2124154 .. 2124170 -  -7.9  -3.63991   CACCATGTCGAAGAA              CAGCGCC TGC AGCGCCG              TGCGCCGTTGCGCGG  63 398
CX034_RS10320 2121681 .. 2121706 -    -6  -4.15044   TCCTGCGTGAAGAAA         CGCCTGCCGA GGCTTA TTGGCTGGCG          TAGAAACTGACCAAT  66 13
CX034_RS10315 NONE
CX034_RS10310 2120205 .. 2120236 -  -8.7  -2.94218   ATTTTTGATTATAGA     GGGTCGGCAG-GCCG ATGC CAGCGCCGCCG-CCC      TACTCCTTGCCCGGA  54 25
        alaS NONE
CX034_RS10300 2117256 .. 2117283 - -21.4  -3.01791   ACGCTCGCGCCAAGA        CAAACGGCCCGC TTGC GCGGGCCGTTTG         CTTGCCGGCAGGCGC 100 41
CX034_RS10290 2115955 .. 2115973 - -10.2  -4.55295   TTGCGGACAAAGAAA             GCGCTGGC ATA GGCAGCGC             TTTCAAGAAATGCAG  89 139
        rimM NONE
        trmD 2114138 .. 2114150 -  -9.1  -4.08216   CGAGTCGGCCGAAAA                CAGCG TGG CGCTG                CGCTGCGGACTGGCC  72 400
CX034_RS10240 2107693 .. 2107719 -   -15  -3.17075   GGCGTCTGAACGCAA         GGGCCCCCCGGC GCG GCCGGGGGTTCC         TGCCCATGGCAAGCG  76 85
CX034_RS10230 NONE
        rlmN NONE
CX034_RS10220 NONE
CX034_RS10215 NONE
CX034_RS10210 NONE
CX034_RS10205 NONE
        bamB NONE
         der NONE
CX034_RS10190 2095364 .. 2095378 -  -9.2  -2.52464   GTTTGTTTTAAGTGA               CGGCAC AGT GCGCCG               AAATCAGTACTCTAC  54 118
CX034_RS10185 2095039 .. 2095068 - -17.2  -4.36595   GAGCCAAAGCGAAAA       TGCCCGCCGGCGC TGGCC GCGC-GGCGGGCA       ATCAAGGGTAATGCT 100 53
        hflX NONE
        hflK NONE
        hflC 2091588 .. 2091617 - -19.3  -4.98531   TGCCCAAACGAAAAA       CGGCTGAGAGGGC GTAA GCCCGCTCAGCCG        TATGCGGAATGTTTT 100 122
CX034_RS10165 2090312 .. 2090322 -  -6.8  -2.55896   TTTACGAATCAATAT                 CGAG TTT CTCG                 GGAAATCCGGAAATC  47 76
CX034_RS10160 2088963 .. 2088996 - -18.1   -3.9461   CCTGGCGAATAATAA     CCG-AGGCCGCGCCAC AAC GGGGCGCGGCCCGCGG     CGCCCTACCCCTTGA 100 30
CX034_RS10155 2088168 .. 2088178 -  -3.2  -3.23452   ATGGCGACAAGCTAA                 GACA ACT TGCC                 GCATCAGTAGCACAG  46 195
CX034_RS10150 2087824 .. 2087853 -  -6.5  -3.16055   CAAATCCTGGATGAA       TGATTCTGGAATC AATA GATTCGGGAATCA        GGCATCAATACAGGC  51 30
CX034_RS10145 2085548 .. 2085573 -  -6.1  -4.24002   CCGCAAACCGCAAAA         GGCCATGCGCCG GCC CGGCACATG-CA         TGCCGCCACCCGCCA  70 260
        rpoD NONE
CX034_RS10135 2082716 .. 2082741 - -16.9  -5.14626   ACCACCAAAACAAAA         CGGGCCTCGGA TTGC TCCGAGACCCG          CATGTTTACTTGGTA 100 36
CX034_RS10125 2080948 .. 2080964 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
CX034_RS10105 2078169 .. 2078210 -  -6.3  -3.02511   GCTACCGCCTCAAGA CCTGAACGGCGCGCGCCGGC TCA GCCGGCCGGCGAC-TGCTGG CGCACCCACTGCATG  49 4
CX034_RS10035 2067270 .. 2067282 -  -3.3  -2.52516   TTGCCGAGGACGAAT                TGCAG GCG CTGCT                GGAGGCGGTGCGGCA  39 62
        bioF NONE
CX034_RS10020 NONE
        bioD NONE
CX034_RS10010 2061890 .. 2061900 -  -8.2  -3.53444   CCAGGGTTTCGGAAA                 GGCC CAT GGCC                 ACGGGCGCGGTGACC  62 446
CX034_RS09995 2060380 .. 2060419 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CX034_RS09980 2055718 .. 2055732 -  -5.6  -3.78934   CCCGGGTTAGAAGAA               GCCCAG GGC CTTGGC               GCTGTAGCTCACCAG  60 2
CX034_RS09965 2052462 .. 2052472 -  -8.2  -3.33162   CAGCGTATTCGAGAA                 CGGC AAT GCCG                 ACGCCACGTTGACCA  59 280
CX034_RS09955 2050464 .. 2050480 -  -9.3  -2.75481   TGCCAATTCCAACCA              GGGGGCC GCG GGGCCCC              TGCCACCCAGGAGCA  55 392
CX034_RS09945 2049115 .. 2049141 - -13.6   -3.7795   CCAAAGCCCAGCAAA         TGGCCGCCGGCG CGG CGCTCGCGGCCA         AGCGCGGCGAATCCA  82 280
CX034_RS09935 2048102 .. 2048129 - -17.8  -3.02144   TTACCGTCGCCAACA        TCGCGGT-GGCGC TGC GCGCCTACCGCGA        AACCACGCTGCGCGA  82 361
CX034_RS09925 NONE
CX034_RS09920 2046390 .. 2046403 -  -4.5  -3.02144   GCAGGCGCTCGAAGA               GGTCA TCAC CGACC                TGCAGCGCCGCGGCG  46 208
CX034_RS09900 2042025 .. 2042035 -  -3.2  -2.78816   CCAGCCCCTACGACA                 GCAC GGT GTAC                 GACCCGCCCAGCTAC  40 329
CX034_RS09870 2037041 .. 2037056 -  -3.2  -2.52516   GCGTCGACCAGCAAG              GCCG GGCGATGG CGGC               GATCAATATCCGCTG  39 120
CX034_RS09850 NONE
CX034_RS09845 2033109 .. 2033137 - -10.2  -3.52073   GCTGCAATACCAGAA        GCAGCTGCGCCT GCACG AGGCGCACCGGC        TGATGGTGGCCGAAA  65 177
CX034_RS09815 2026976 .. 2027000 -  -2.7  -4.07568   GGCGCCGGCGCAAAA          CAGTGTTGCAG CCG CCGCAATGCCG          TGCCCGCTGGTACGG  59 49
CX034_RS09810 2025679 .. 2025725 -  -9.6  -3.68222   CGCCAATTCGAACAA GTCGCACGCGCGCCAGGTCG-ACG TGG CGCGCGACCTGGC-C-CG-GCAAC TGGCCGGCGGCGACC  68 224
CX034_RS09795 2022786 .. 2022827 - -14.3  -3.19513   AGAACGGCAACCTAA CCCCCGGGTGCCTGTCCCC ACAG GGGGACTGGCACCCGCCAA  TTGCTTGCCTGTCCC  73 126
CX034_RS09785 2020917 .. 2020927 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS09775 2018476 .. 2018504 -  -8.1  -4.10552   TTCCACTAAAGCAAA        TCCGACATGGC ACAGGCG GCCAAGCCGGA        CAACGGCACGCCGGC  69 395
CX034_RS09765 NONE
CX034_RS09760 NONE
CX034_RS09755 NONE
CX034_RS09750 2014631 .. 2014658 -   -14  -3.02144   GCAGGCCGCCGAACA        CGCCCGTCGGCC GCCA GGCCGCCGCGCG         CGCCAGCGCCGCGTC  72 225
CX034_RS09740 2012481 .. 2012508 - -10.6   -4.2535   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC  89 104
CX034_RS09705 2007174 .. 2007208 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS09660 NONE
CX034_RS09655 1996780 .. 1996829 -  -5.6  -3.29144   GGATGGTGTTGATAA TTGTGCGCGGCCC--CCGCGGGCCG GCG CGGCCCGGTGTCAAGCCGCGC-CGA GTATTGTGATCGAAC  51 12
CX034_RS09650 NONE
CX034_RS09645 1994459 .. 1994475 -  -3.6  -3.14344   GAGGTGCTGCACGAA              TGGGGC CTGGC GCCCGA              GCGCGTGGCCGGCGC  45 102
CX034_RS09610 NONE
CX034_RS09605 1987168 .. 1987180 -  -3.3  -3.65046   GCCGGAGGGGAAGAA                CAGCG GGG CGATG                GCGATCAGCGCGGCC  53 82
CX034_RS09595 1985110 .. 1985164 - -12.1  -3.01712   GGCTGGCGGGCAACA GCCACGTGTCGGCCGCGGCCTTGATGG GCG CCACCACGGCGGCGGCC-ATGC-TGGC CGGCGGCCCGGCTTT  67 277
        queF 1981963 .. 1981989 -  -7.9  -2.52464   TGCTGGCGCAATGGA         TCGCGATGCAG GCGCG CCGCACCGCGC         TGAACGCGGCTATTG  49 35
CX034_RS09510 1965836 .. 1965875 - -11.3  -3.28712   CCTGGGGCTGGAGAA  CCGCCTGGCCGACCGCA TCGGCC TGCTGTCGGGCGGGCAG   CGCCAGGCGGTCAGC  66 387
CX034_RS09420 1946799 .. 1946818 -  -3.4  -2.82595   TTGAACCACCGAAAC            GCGTGCGG CAAG CCGTAAGC             CACCTCAGGACCTGT  41 175
CX034_RS09415 NONE
        rpmG 1946068 .. 1946089 - -18.7  -4.86731   CCTTGCCAAATAAAA           CGGCCCCGC CCTG GCGGGGCCG            TTCACCATGGCGCGC 100 68
CX034_RS09385 1941192 .. 1941222 - -22.6  -3.85698   TCGCCGCCGCATAAA       CGAAGAGCCCGCCG GTG CGGCGGGCTCTGCG       GTTTGACCTGAGACG 100 49
CX034_RS09380 NONE
CX034_RS09375 1939352 .. 1939392 -  -2.4  -5.00884   ACTCGTGCGAAAAAA TAGGTAACGGACCGCGCCC GGCA GGGCGCGGGCGGTCAAA-A  CCATCGATTATAGGA  79 45
CX034_RS09370 NONE
CX034_RS09365 NONE
CX034_RS09360 NONE
CX034_RS09355 NONE
CX034_RS09350 1933082 .. 1933092 -  -2.4  -3.01712   GCGTTTCCGGGAAGA                 CCTG TGC CTGG                 CGGCGGGCGCCGATA  41 104
CX034_RS09340 NONE
CX034_RS09335 NONE
CX034_RS09330 1929494 .. 1929518 - -13.6  -4.09685   TTTTATTGCTCAAAA         CCCCGC-AGCC TCAC GGCTCGCGGGG          TTTTGTTTTTGGGGG  85 355
CX034_RS09295 1921713 .. 1921731 -  -8.1  -3.20348   GCGAGTAATAGGCAA             GCGCTGC GAACA GCAGCAC             CCAGATGGCGAAGGT  54 285
CX034_RS09280 NONE
CX034_RS09275 NONE
CX034_RS09270 1916468 .. 1916482 -   -10  -3.33696   GGCTTTTCCAAGCAA               TTCGCC AGC GGCGAA               ACCAGCGGCTACGCC  63 336
CX034_RS09245 1913140 .. 1913160 -  -4.7  -3.62046   CCATTCGCCCAAGAA           CCTGGCCA TGGCGC TGGCC-GG            CGAGGCCGGCGAGCT  54 285
        acnB 1909571 .. 1909590 - -16.4  -4.91852   CGCAGCAAAAAGAAA            GGCCCGCC TTGC GGCGGGCC             TTTGTCATGGCCGAA 100 48
CX034_RS09225 NONE
CX034_RS09220 1908301 .. 1908311 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CX034_RS09215 1907163 .. 1907175 -  -4.8  -4.07568   GGGGGCGCCTGAAAA                CTGG GACTA CCAG                GCTGGCAGCCTGACC  63 147
CX034_RS09195 1903137 .. 1903157 -  -3.8  -4.09864   ATCGATGCGTCAAAA            GTTCCCGC GCGAG GCGGGCGC            CGGGCCGACGTGCTC  61 108
        acnA 1900240 .. 1900263 - -19.6  -5.26875   CGTCCAACGAAAAAA          CCCTCCGGCC AGCA GGCCGGAGGG           TTCGGGTCGCGCAGG 100 59
CX034_RS09180 1898014 .. 1898034 -    -4  -3.79687   ACGCGGCAGAAAATA           TCGGCG-CGC ATG GCGGCGC-GA           TCCGGTCAGTGGAAC  57 31
        earP 1896861 .. 1896877 -  -2.2  -2.64274   AGGCTGTCAAAGTGA              GGCC TTGAGCACC GGCC              GATCCGGGCAAAGCA  38 60
         efp 1896162 .. 1896181 - -16.4  -5.75342   CCGGGGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG 100 56
CX034_RS09065 1876000 .. 1876012 -  -5.5   -3.2614   GATGCCCCATACCAA                GCACA AAC CGTGC                CAGCTTTTTTCAAGA  51 256
CX034_RS09045 1872767 .. 1872820 -  -8.8  -2.82623   CGGGGCGGAGAACGA GTAGGCGGGGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCG--TGCCAACCGTC AATCGTTGACGAAGT  54 24
CX034_RS09005 1861500 .. 1861542 - -10.5  -3.40403   GGGGCTGGACGACAA GCAGGTGATGCAGGCCGCCC ATGC GCGCGGCGTGC-TCACGCGC GCTGTCGCGCTACTA  65 171
CX034_RS08995 1858729 .. 1858772 -   -34  -3.06815   ATCCTCCTCAATACA GACGCGGGATGGTGGCGCCC ATGG GGGCGCCCCCATCCCGCGTC GAACGATCCAAACAA 100 41
CX034_RS08990 1857194 .. 1857217 -   -21  -5.47399   GCAAGGCGAAAAAAA          GGCCGGCGCC CGAA GGCGCCGGCC           TTGCTTGCCCGCGGG 100 47
CX034_RS08985 1856098 .. 1856128 -  -5.4  -2.71712   TGCTCGCCCTGAAAG      TCAGCCGGC-CCT GCGACG AGGTGCTGGCCGA       GGTCGTGCCCTAGGG  45 107
        pgaA NONE
        pgaB NONE
        pgaC NONE
CX034_RS08915 1839746 .. 1839760 -  -5.6   -4.1891   CTGGCCGAACAGAAA               CTGTCC AGC GGGCAG               GCCGACCTGGTGGCG  66 180
CX034_RS08900 NONE
CX034_RS08895 NONE
CX034_RS08890 1836953 .. 1836963 -  -2.4  -2.54523   GCAGACTGGAATGCA                 TGGG TTA CCCC                 TGGAGGTGGGTTTTC  38 19
CX034_RS08885 NONE
CX034_RS08880 NONE
CX034_RS08875 NONE
CX034_RS08870 NONE
CX034_RS08865 1831324 .. 1831351 - -18.6  -3.11687   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC  90 189
CX034_RS08830 1824378 .. 1824393 -  -3.2  -4.07568   CCGCGCGGTCGAAAA              GGGC GAGTTGCG GCCC               GATACCCCGGTGGAA  60 198
CX034_RS08775 1815271 .. 1815292 - -14.5  -4.93696   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 209
CX034_RS08735 NONE
CX034_RS08730 1806894 .. 1806904 -  -2.4  -3.06796   CGCCAGCTTATTCAA                 GGAC TTC GGCC                 TTTTCGATGATCACG  41 7
CX034_RS08725 1805913 .. 1805938 - -19.1  -4.55798   TACGCCAAATGAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 204
CX034_RS08705 1801551 .. 1801580 - -22.3  -2.62616   CGATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACAC        TGGCCGCCGGAGTGG 100 87
CX034_RS08695 1799327 .. 1799343 -  -5.7  -3.09803   CAAGGCCAGCGAATA              CCGCGAC AAC GGCACGG              TGGTCAATGTGCGCG  48 194
CX034_RS08680 1796283 .. 1796315 -  -8.5  -3.61715   CATCCTGTCGAACAA    CCG-CCGCCATGCGCC GTTC GGC-C-TGGCGGGCGG     CGAGGCCGGGGCGAT  63 184
CX034_RS08660 NONE
CX034_RS08655 NONE
CX034_RS08650 1788782 .. 1788793 -  -7.2  -3.27923   GGTGAACAGCAGCAA                GGCC ACCA GGCC                 GCTGGCCACCAGCGC  54 111
CX034_RS08640 NONE
CX034_RS08635 1785515 .. 1785534 -  -2.7  -3.58343   CCGACGAGCCGGAAA            CCGCGGC GAAGAT GGCGCAG             CCGATGACGTTGGTG  49 332
CX034_RS08590 NONE
CX034_RS08585 1761521 .. 1761538 -  -3.4  -3.73775   CCTATGGCCAGCAAA             GCCTGCA TAGCC TGC-GGC             GGCTGCACCGGGCCG  55 419
CX034_RS08535 1754479 .. 1754491 -  -3.3  -3.13371   CAGGCCACTAATATA                CCGAA GCG CCCGG                CGAATAAAAATAGCG  44 76
CX034_RS08530 1753583 .. 1753598 -  -7.5  -3.39895   GTCGGGAGGAACGAA              GCCGG AAACCG CCGGC               GCAAGCGGGCCCAGG  59 133
CX034_RS08525 NONE
CX034_RS08520 NONE
CX034_RS08515 NONE
CX034_RS08510 NONE
CX034_RS08505 NONE
CX034_RS08500 1746882 .. 1746902 - -10.4  -2.70932   GGGCGGGGTGAATCA           GCGCGGCGC GTTG GCGC-GCGC            CACCATGGCGTCGAG  57 2
CX034_RS08435 1733999 .. 1734009 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS08430 NONE
CX034_RS08405 1726533 .. 1726563 -  -5.2  -3.14602   TCTAGTCGACCAAGA       CCGGACGCGCTCCC TAG GGGAGCAGGCGCGC       CTTGACCTGCTGCGA  49 8
CX034_RS08370 1718602 .. 1718612 -  -8.2  -3.21747   GGATGGGAGGAGTAA                 CGCG CTG CGCG                 GGCGCGTCGCGACGC  58 106
CX034_RS08365 NONE
CX034_RS08360 1716017 .. 1716031 -  -2.7  -3.75169   GACGACTCCATGAAA               CGGGG ACCGG CCACG               CGGGGCAGGGATTCT  53 39
CX034_RS08355 1715129 .. 1715163 - -14.9  -3.63515   GCCCATCGGCAAGAA     GGTGGGCCTGGCCAC CGAAC GCGGCATGGCCCACC     TCGTCATCGACGAGC  83 64
CX034_RS08280 1701343 .. 1701364 -  -3.6  -3.53012   CCCTGGCCGCCGAAA           CCCGCGAC CAGGGC ATCGCGGC            CAACGCGGTGCTGCC  49 205
CX034_RS08260 NONE
CX034_RS08255 1696389 .. 1696407 -  -6.7  -3.21416   CATGGCGACGATCAA            CGACCGCA GCGT TGCGG-CG             TCGGGCGGCGTCTTC  52 168
        arsH 1695149 .. 1695159 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 255
CX034_RS08235 1693683 .. 1693717 - -17.1  -2.66316   CGTCCTACGACATGA    CGCCGCC-GGCCGCCA AGGA CGGCGGCCAGGAGGCG     CCGTGAGCGACGCCC  80 453
CX034_RS08215 1690278 .. 1690295 -  -4.8  -3.16742   CTCAAGCCGGAGTAA             GGCCGCC GCTCA GGCG-CC             GGGAAACCGCATGGG  47 17
CX034_RS08195 1686560 .. 1686571 -  -5.8  -2.62184   TGCCCGCTCAGACGA                TGCG CGTG CGCA                 AGGTGCCGATCTGCG  44 6
CX034_RS08190 NONE
CX034_RS08185 1684511 .. 1684521 -  -6.8  -2.94912   CCTTGAAGTTATAGA                 GCAG GTT CTGC                 CTGGATGCGCGGCGC  51 59
CX034_RS08180 NONE
CX034_RS08175 1682247 .. 1682258 -  -7.2  -3.14132   CCTGGTGCGCACCAA                CCCG CGCA CGGG                 CCGGCGCTCGCTCTA  53 253
CX034_RS08165 1680670 .. 1680688 - -10.4  -3.68073   CAGTTCATGGAAGAA             TATACGTC ATT GACGTATA             TTTCAATCGCCAGCA  70 109
CX034_RS08155 1680113 .. 1680138 - -13.3  -2.79831   GCAACCGCCAGCACA         CCGCCAGCG TGGTGCTG CGCTGGCGG          TTCTGAATCGCAGCT  67 45
CX034_RS08145 NONE
CX034_RS08140 NONE
CX034_RS08130 1671941 .. 1671989 -  -7.3  -2.84192   GACATGAGCAGTACA CCCTTGCGGGCCGGGCGCGCGGCG GCGC CGCCGCGCG-CCGAAGCGC--GGC CGCTGGCCGGACTGT  50 439
CX034_RS08075 1660331 .. 1660344 -  -9.5   -2.5092   GAATATTTTATGAAT               GCGCG CGGC CGCGC                GGCGCGGCCTGGAAG  54 61
CX034_RS08070 NONE
CX034_RS08065 1658288 .. 1658313 -  -9.7  -3.24232   CTCCCTTGAAAGACA         CGCTCCTGCCGA TTC TAGGCAGG-GCG         GCGGGCGGATCGGCC  61 120
CX034_RS08060 1657436 .. 1657446 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS08055 1656405 .. 1656416 -  -5.8  -3.01712   GGCTCGCGCCGAAGA                TCGC GCCG GCGA                 CCGAGCCGACGCCGC  47 41
CX034_RS08045 NONE
CX034_RS08040 1654533 .. 1654543 -  -3.2  -4.09685   TCGTACGGGCCAAAA                 CACC TCC GATG                 ACGCGAGTGCCGCGA  59 252
CX034_RS08035 1653604 .. 1653625 -  -8.7  -3.30771   CGAGAGCGTGCAGAA           CGCCATCGAC CAG GCCGA-GGCG           GTGGCCGACGATATG  58 328
CX034_RS08025 1651314 .. 1651332 - -12.4  -3.57144   CGCTGCATTGGGAAA             GCGTCGAC GCG GCCGACGC             CGCGGCGGTGCTGGA  74 344
CX034_RS07955 NONE
CX034_RS07950 1631975 .. 1632010 -    -9  -4.70266   AACAGCAGGGAAAAA   GA-GGC-CCCGCGCCG TGCCCG CCGCGCGGGCGCCGTC    GTGCTGGACGGGCTT  86 94
CX034_RS07945 1629654 .. 1629675 - -15.9  -4.77165   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 306
CX034_RS07925 1626211 .. 1626229 - -10.2  -2.62184   CCTCGCTGGAGACCA             TCCGCCAC ATG GTGGCGGC             CGGGATCGGGGTGAC  55 278
CX034_RS07890 1617213 .. 1617271 - -12.3  -4.06419   TTCGTGGACAAATAA GGCCGTGCGCCGCCA-GGAAAAGCCGCC TTCG GGCGGTTTTTCTTTGGCCGCGCGCCGGC GCCGTTCATGCGTCG  83 31
CX034_RS07880 1614956 .. 1614983 - -15.6  -4.59773   TGCTACGGGGAAAAA        TGCAAAGCGGCC GGAT GGCCGCTTTGCC         GACAAACAAGGCAGT 100 107
CX034_RS07875 NONE
CX034_RS07870 1612427 .. 1612437 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS07865 1611104 .. 1611115 -  -2.2  -3.21099   CCGCCCGAGCACGAA                GAGCG CGC CGC-C                TACCTGGTCGAGGGG  43 333
CX034_RS07850 1608296 .. 1608349 - -19.6  -3.01712   CCGGGCGGTCGAACA CCAGCAGGCGGCGGCC-CGGCAGGCCG AAC CGG-CTGCCGCGGCTGCCG-CGGCCGG GACGGCGCCGGCCCC  87 294
CX034_RS07815 1599423 .. 1599451 - -11.6  -2.65298   GCCACGCAGGAGAAT        GCCGCCATGGCC GAGCA GACCGCGGCGGC        GGCGGCCTCGCTGGA  61 105
CX034_RS07800 1595252 .. 1595287 - -20.4  -2.84602   GGCACTGCAGTAAAC    CCGCGTGCCTGTCCCC GCAC GGGGACTGGCACGCGC     TGAATCCGGGGTGCC 100 154
CX034_RS07790 1593226 .. 1593241 -  -6.2  -3.07355   TTGAAACAACAACGA              CTGAAA AGGA TTTCAG               GGGCACCGGTCTATG  49 230
CX034_RS07785 NONE
CX034_RS07780 NONE
CX034_RS07775 1592366 .. 1592378 -  -9.1  -3.28712   GTGCGTGTCCGACAA                GCCGT TGC ACGGC                GAGCTCAAATTGCCC  59 243
CX034_RS07765 1589706 .. 1589727 -  -7.9  -3.61398   TGTGCTGTTCAACAA           TGCCGGGCGC GGC GCGCC-GGCC           GTGCCCATCGAGGAG  60 501
CX034_RS07755 NONE
CX034_RS07750 1587533 .. 1587543 -  -8.2  -4.09685   CCCGAGGGCGGAAAA                 GCCC CCG GGGC                 CAGCAAGCCCTCGCG  72 45
CX034_RS07745 NONE
CX034_RS07740 NONE
CX034_RS07735 1583937 .. 1583963 - -13.6  -3.14132   TCGGGTGGCCAGCAA         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCCATCAAGCCCAAG  72 308
CX034_RS07705 NONE
        bamC 1577895 .. 1577918 - -18.2  -5.78622   CCAGGCCAAAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTGCGCCGCT 100 66
CX034_RS07680 1572311 .. 1572339 - -20.3  -3.61398   CTGCGTGTGCAACAA        CTGCGCAACGCGC GCC GCGCGCCGCGCAG        GCCGGCATCAGTCGT 100 33
CX034_RS07670 NONE
CX034_RS07665 NONE
CX034_RS07660 1567544 .. 1567558 -  -4.2  -3.14931   GCGATTCGGTATCAA               TCCATG CAG CATGGC               CAAACACTCCAAACG  45 52
CX034_RS07655 NONE
CX034_RS07650 NONE
CX034_RS07645 NONE
CX034_RS07640 1563844 .. 1563869 -  -8.2  -3.40403   GCCGCTGGACGACAA         GGCGGCCGCCG ATGCG CTGCGGC-GCC         TGCGCGGCCTGGACG  61 483
CX034_RS07630 1562737 .. 1562768 - -14.6  -3.02829   CAGAGGCGGGTAAGA      TCGAATGGCTGTAT GGGC ATACAGCCATTCGC       GCGCCTGGGGCGCAG  74 50
CX034_RS07625 NONE
CX034_RS07620 1561056 .. 1561090 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 264
CX034_RS07575 1548397 .. 1548429 -   -20  -2.64616   CGGGGACGGAGACGA     CGGTGTGCCTGTCCC AGCG GGGACAGGCAC-CCG      CACGGGCAGGCGCCT  95 77
CX034_RS07570 1546793 .. 1546827 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 201
CX034_RS07535 1540521 .. 1540562 -  -2.1  -4.01411   TACGAAAAACTCAAA TCCGGATCGTGGATATGCGG GCG CGGCATCGCCGCG-TCCGCA CGCTTACTGTGCCTT  56 29
CX034_RS07530 1539089 .. 1539111 -  -9.8  -3.28712   CTGGGTGGTGGACAA           CCAGCACGGC GAA ACCGTGCTCG           AACTCGACGCCACCA  63 207
CX034_RS07445 1525394 .. 1525424 - -19.6  -3.14344   CAGGTGGTGCAGTAA       GGCGGCGACCGGCG CGG CGCCCGGCGCCGCC       CGCCCGCATGGAAAA 100 79
CX034_RS07430 1522190 .. 1522233 -  -9.4   -3.0127   CGAGGGAATTACAGA TCGCCTGAGCGAGGCAGCGG CGCT CCCCTGCCTGGGTGAGGCGC GCGTCCCCGGTTTCA  57 38
CX034_RS07425 1520787 .. 1520835 -  -3.5  -3.39449   TCCGAGCAACATGAA GGGCTC-CTTCGCGCGCGCCGC GGCAAG GCCGCGCGCGCGCCGTGCGTCG TGCGCCTCAGCTGGT  49 32
CX034_RS07420 NONE
CX034_RS07415 NONE
CX034_RS07410 1518641 .. 1518661 -  -3.3  -3.35046   GCAGTCTCGGAAAGA            CGGATAT TCCCAAT ATACCCG            TTGCCCGGCGGTCCG  46 59
CX034_RS07405 1517797 .. 1517831 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 411
CX034_RS07360 1510663 .. 1510680 -  -8.3  -4.13767   GGTGGCACGGCAAAA             CGGTGCC TTGC GGCGCCG              TTTTTTTCGTTGCAT  72 151
CX034_RS07325 NONE
CX034_RS07320 1502493 .. 1502503 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 383
CX034_RS07310 1501375 .. 1501409 - -12.9  -2.61582   CAGGGCATTCAGAAG    CG-CGGACCTGGCCTT GTAC AAGGCCAAGGCCGACG     GGCGCAATCGTGTCC  62 105
CX034_RS07265 1492073 .. 1492092 - -13.6   -5.5112   GGGACCAAGAAAAAA            GCCCCTGA CGGA TCAGGGGC             TTGCAATGTCTGGCG 100 36
CX034_RS07260 NONE
CX034_RS07255 NONE
CX034_RS07250 NONE
CX034_RS07245 NONE
CX034_RS07240 NONE
CX034_RS07235 1484693 .. 1484711 - -13.8  -2.61264   GGCTCCATGGACAAG             GCCGCCCG GAG CGGGCAGC             GGCCTTCCATGATGA  69 111
CX034_RS07230 1483439 .. 1483456 -  -7.7  -4.18197   AGTGCGTATGGAAAA             CGCCGAA GATG TTCAGCG              TGCCTGGACCTTGGC  74 20
CX034_RS07225 1481029 .. 1481054 -  -4.7  -5.29846   AACCCGAAAGAAAAA         CCCCGCAGA CGCTCGGT TCTACAGGG          GTTTCCTGGGTATTT  93 107
CX034_RS07220 1480111 .. 1480122 -  -3.6  -3.12668   CATCTGGAGACCCAA                GCGC ATTT ACGC                 CGGCGTCGGCGCCTG  45 85
CX034_RS07210 1478832 .. 1478869 -  -9.8  -3.05384   TTTTTCTGGATCGAA   CCGCCGGTCA-TCAGCC AGGAA GGCTGACCGGCCCGCGG   GCCGTTATGCGCCAG  60 30
CX034_RS07200 1477923 .. 1477960 - -10.5  -2.59742   CGCAATGGCGACAAT   CCGCAACCGCCCGCAGTC CGG GAC-GCCGGCGTTTGCTG   CGTTGCGGCAAATTT  57 153
CX034_RS07195 1477451 .. 1477470 - -10.6  -5.40072   CGTGCCGCAAAAAAA            GGCCGCCC ATCC GGGCGGCT             TTTTCATTGATTTGC 100 53
        trxB NONE
CX034_RS07160 NONE
CX034_RS07155 1468882 .. 1468892 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 77
CX034_RS07150 1467860 .. 1467899 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAG CTAG CTGTGAACTGTCAATAGG   TTGTATTCGTCCAGG  64 4
CX034_RS07145 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 1459116 .. 1459136 -  -6.7   -2.8655   GGCACGCATACTATA            CGCGCGCCG CTT CAGCGCAGG            CGGTCCAGCGCCAGG  50 16
        kdpE 1455398 .. 1455432 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 203
CX034_RS07080 1449909 .. 1449937 -  -5.8  -3.33261   GCTCAAGGCCTACAA        GCGTGGCGCCGC GGGCA GCGCGGCCACGG        CCAACGTGCGCAAGA  52 186
CX034_RS07065 1448136 .. 1448149 -  -9.5  -2.75183   AGTGGCAGTCAATGA               GGCGC GACA GCGCC                GAGGCATGATAAGGA  55 87
CX034_RS07060 NONE
CX034_RS07055 1445889 .. 1445914 -  -7.5  -3.16881   GATCGACGCCACCAA         CGCCG-GCAGCG TCG CGCTGCACCGCA         AGCTGGGGTTCGTGC  53 148
CX034_RS07040 1441895 .. 1441924 - -22.3  -2.62616   TCATGGCGTAGAGCA       GTGTGCCTGTCCC AGCG GGGACAGGCACAC        TCTGTCGCGGATGTC 100 97
CX034_RS07000 NONE
        recN 1431860 .. 1431900 -  -2.3  -4.75776   AAGCGAACTGAAAAA  CATGGGCCTGAAGGCGACG TTT CCCCGCCTGAAGATCCTTG  ACATTTTTCGTAAAT  76 453
        bamE NONE
CX034_RS06980 1430075 .. 1430087 -  -4.7  -3.29144   CGATGGCCGCTACAA                GCTGG CCG CCGGC                TGGCTGATCGATCAA  49 263
CX034_RS06970 1428942 .. 1428963 - -14.5  -5.63236   ATGCAAAAACAAAAA           GGCCCAAAC CGAA GTTTGGGCC            TTTTTTGAATCTGGA 100 37
CX034_RS06925 1418356 .. 1418371 -  -3.2  -3.40403   CCCTTCGCAGGACAA              GGCTTC GTGG GAAGTC               GAGAATAGCGTCGCG  48 53
CX034_RS06920 NONE
CX034_RS06915 1415847 .. 1415862 -    -4  -3.90588   TATGGGGTAATGAAA              CTTCTGG AAT CC-GAAG              GGGTATCGCTGCGCG  58 426
CX034_RS06790 1390706 .. 1390738 -  -8.9  -4.07568   GCGCTTTGGCGAAAA      GCCCGCCGACCGCGC CGC GTACGCGCGGCAGGC      CCGCTTCCTGGCGGG  72 179
CX034_RS06775 1388098 .. 1388148 -  -7.2   -4.0162   GGGCCACAGGAGAAA CAGCGGCGCCAGCATCCAGTCGAG GAT CTCGCCCAGCAGCGAGCGCTGCGG CGGCGCGAAACTCGG  66 105
CX034_RS06770 1386703 .. 1386718 -    -4  -3.71917   ATCTTAAATTTGAAA              CAATAG GTAA CTATCG               CGCGTACCAGCCCGG  54 61
CX034_RS06765 1384842 .. 1384870 - -10.9  -4.60041   AGGGAGCTTGAAAAA        GCCGGATTGGCGC AGC GGTCCAACCCGGC        GGGGGATGGTTATCA 100 38
CX034_RS06720 1376041 .. 1376054 -  -9.5  -2.70932   CTTCTTGTGCAATCA               GGCCC GCGC GGGCC                TAGGAGAGGGCTTCG  55 25
CX034_RS06715 1374490 .. 1374512 - -19.2  -5.53288   CGCAAGGCAAAAAAA           GGCCCGACAC ATC GTGTCGGGCC           CGTACGGGGCACGCA 100 243
        rdgC 1372775 .. 1372800 -  -6.7  -4.68724   TGATCGAACAGAAAA         GCACG-CTGGCC GAG GGCCTGGCGGGC         GCGGACGTCATTTAC  82 434
CX034_RS06680 1369705 .. 1369752 - -21.2  -4.15788   AACGTGCTCAAGAAA GGGGCTGAGCAAGGCGGCCGGC AGGC GCCCGCCGGCATGCTCAGCCGC ACTGGCGCTGGATCG 100 18
CX034_RS06660 1367179 .. 1367237 -  -2.2  -4.33153   GCCAAGATCAACAAA CTGGAGCTGTAG-TCCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGCTTCCTCGGC-CC-G TGCGCGCGTGGACAG  65 78
CX034_RS06650 1365213 .. 1365223 -  -6.8  -3.03159   CGAACGCGCCCAAGA                 CGCT GCG AGCG                 GTCATTGATTGGGCT  51 121
CX034_RS06605 1357774 .. 1357808 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS06595 1355412 .. 1355424 -  -3.4   -4.2349   CGCGCAGATCGAAAA                TTCC TCGCT GGAA                CAAGGACTTGTCCAG  63 69
CX034_RS06585 1353987 .. 1354021 -  -2.1     -3.94   GCAAGCCGTAAACAA    CGGGACGTCCTACGCCA AGC TGGCAT-GGACG-CTAG    GTGTGAACTGTCAAT  56 22
CX034_RS06560 1350434 .. 1350468 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS06485 NONE
CX034_RS06460 1331757 .. 1331801 -    -7  -3.67792   GTAGATTCAGGGAAA CCACGGGCACGACCGTCA-CC AAGT GGCTGAATGCCGAGCGCGTGG CGCGCGCCCAGCAGT  64 358
CX034_RS06450 1329704 .. 1329751 -  -8.4  -2.55544   TCATCACGGAAGTGA CCATCGGCTTCAACTATGCGCTG GGC CAGGTCAC-GGTGACGCCGATGG CGCTGCTGATGACCT  51 224
        sulP 1324007 .. 1324022 -  -3.9  -3.54424   GGTGAGCGCCGGAAA              CAGCC TGACCG GGCCG               GGGCCGCTCGCCAGC  51 379
CX034_RS06350 1310403 .. 1310416 -  -4.5  -3.54459   CCAAGTCGTCGCAAA               GCC-GG AAT CCTGGC               GACGGCCTGCCACCG  52 57
CX034_RS06320 1304373 .. 1304394 -  -2.9  -2.65264   CGACCACGCACAGCA           GCATGCC-GT CGT ACTGGCTCGC           CGCCACCTACCGCCT  39 47
CX034_RS06275 1293530 .. 1293547 -  -4.1  -4.31943   GGTACAGAAAAAAGA             TGAAGCG TCCC CGGTTCA              TGGCGGGCGGCGGGA  68 42
CX034_RS06270 1292728 .. 1292751 - -16.7   -3.0806   GCGAAATCCGCAAGA          GGCGGCGCG CCGATC CGCGCCGCC           GGCGCGCGGGCCCGG  81 48
CX034_RS06265 1291431 .. 1291441 -  -2.4   -4.4078   GCTGGCCAACGAAAA                 GCCC CAG GGCC                 AGACCATCGCGTATG  68 83
CX034_RS06235 1284540 .. 1284563 -  -2.2  -4.07568   TTCGGGGCGGGAAAA          GGGGCTGGGC AGGC GCTCAGGCCG           CGGCGGCGCCTGCCG  58 18
CX034_RS06230 NONE
CX034_RS06225 1281822 .. 1281847 - -13.3  -2.57132   GGCGCCCGGGATAAT         CGATACGCCGC TGAC GCGGCACATCG          TGCAGGATCGCCAGG  66 269
CX034_RS06195 NONE
CX034_RS06190 1275420 .. 1275457 -  -2.5  -4.58395   CGCACGCTGGAAAAA   GCTGATCGACGAGCGCGG GAT CCGCGCGAATTGA-CGGC   CGCGGCCTCGTGCCG  70 112
CX034_RS06175 1272238 .. 1272280 -  -3.9  -3.84406   CCGCTATGACAACAA CGATCCGCGCCCCTGGCTGG CCGG CCAGGCAGGCTGGCGGG-CG CGCGCTAATTCGGCC  58 339
        queE 1270160 .. 1270182 -  -4.8  -3.64703   GGCGGGTGACGGAAA           TCATCGCG CATCTCC CGCGATGG           GACGGACAGTCATGG  55 35
        queD 1269455 .. 1269479 -  -7.8  -3.31792   GTACGACGCCCACAA         CATCCCGGCGC TCAA GCGCCTGG-TG          GGGCAGGGCGCCAAG  55 266
CX034_RS06135 NONE
CX034_RS06130 1266199 .. 1266216 - -11.3   -4.1822   GCCGAGCCGAAGAAA             GTACCGC CCAG GCGGTAC              ACCGCCTTGGAGCGC  89 192
CX034_RS06115 1263863 .. 1263890 -  -5.5  -2.53263   GCGATGCGCAATTGA        TCGGCG-CCGAC CTGGT GTCGACCGCCGG        GCAGGGCCGCGTGCA  42 428
CX034_RS06100 NONE
CX034_RS06095 NONE
CX034_RS06090 NONE
CX034_RS06085 NONE
CX034_RS06080 1247723 .. 1247737 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
CX034_RS06070 1245905 .. 1245951 - -12.1  -3.35679   GCGCGTCATCGACAA GCGGCCG-CGCTGATCGCGGCG GGTT CGCAGGGCGCAACGCCGGCCGC CATGGCCGGCGTTGC  73 45
        paaX 1235189 .. 1235214 -  -4.6  -3.62597   CGGACCGGGCAACAA         TGGCGGCGAC GCGCTG GTGGCGGCCA          CGCTGCTGCAGGCGC  54 497
CX034_RS05995 NONE
        rsgA 1232185 .. 1232209 -  -4.3  -3.78419   GGAGGAAAGATACAA         GGCACC--CCG GGAGT CGGCAGGTGCC         TGTCCTCGTGGGGAC  58 56
CX034_RS05960 1225665 .. 1225717 -  -7.4  -3.36054   GAAAGCCATAGAACA GGTCGGACGGCAGGTGCAGGCC CTGCGGGTC GGCCTGCGCCAGCAGGCCGCAC GCGGTGGTCTTGCCC  59 151
CX034_RS05940 1221853 .. 1221880 - -11.2  -3.77119   CATCAACGAATACAA        GCGGCGC-CAGGC CCC GCCCGGGCCCCGC        ATCACGCCGCGCGCG  74 501
        argH 1217360 .. 1217377 -  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 49
CX034_RS05905 1214458 .. 1214468 -  -8.2  -2.80622   AGATAGTCGATCATA                 GCGC GGC GCGC                 GGCCGGAAATCGCGG  52 10
        moaA 1212988 .. 1212998 -  -4.6  -3.05384   CCGCTGCGCACCGAA                 CGGC CAC GCCA                 GGACAGCCGCGAGGA  46 372
CX034_RS05870 NONE
CX034_RS05865 1205758 .. 1205776 - -13.8  -3.05463   AGCCCGCCGACTGAA             CGGCGGCG CTA CGCCGCCA             GGCCGTGCTGGCCGA  72 15
CX034_RS05855 1204572 .. 1204587 -  -4.6  -3.14404   ACAGCAACTACGTAA              GGCTCA GGCC TGGGCC               AGCATGGTGGCGGCG  47 13
CX034_RS05850 1203030 .. 1203065 - -13.2  -3.00298   CGTGGTAACTACATA    CCCGGGAGCCTGTCCC AGCG GGGACAGGCTCCCTTT     GCCGCGGCAGTCGCT  70 57
CX034_RS05835 NONE
CX034_RS05830 1199399 .. 1199417 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 297
        cadR 1195392 .. 1195402 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS05810 1194370 .. 1194409 -  -9.4   -3.5361   GAACCATGCATACAA  CCTATTGAATCTTCACAC CTAG GTGTGAACTGTCAATAGG   TTGTATTTGTCCAGG  64 4
CX034_RS05805 1193221 .. 1193235 -  -2.7  -3.57144   CCCTGCAGCTGGAAA               TGGCC CTGTC GGCCT               ACATGACCGAGCAAG  50 129
CX034_RS05765 1185110 .. 1185144 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS05745 1181024 .. 1181034 -  -6.8  -3.40878   ACGAGGCGAACAAGA                 GCTC GGT GAGC                 GTGCCCGACAGCGCG  56 335
CX034_RS05725 1174668 .. 1174688 -  -8.1  -2.62263   AGTCGGGCGAGATCA            CGCTGTCCG GCC CGGCCCGCG            AGATGCTGCACGATC  48 139
CX034_RS05650 1150249 .. 1150269 - -15.4  -5.13343   CAATGCAAAATAAAA            GGCGGGGC ATGCA GCCCCGCC            TCAAATAATAACGAC 100 92
CX034_RS05645 1149652 .. 1149667 - -10.4  -4.62069   CCGGCATGGCAAAAA              GGAGCC TTAG GGCTCC               TTTTTTGCGTTCTGG  93 81
CX034_RS05615 NONE
CX034_RS05610 NONE
CX034_RS05605 1141242 .. 1141268 -   -15  -3.60865   GATTCTAAAGCAGAA         CGCCGGCTGCGC GGG GCGGCGCCGGCG         CGGCCGGGTCAGGGT  81 34
CX034_RS05600 NONE
CX034_RS05595 1140160 .. 1140176 -  -2.1  -2.64099   CGGTCCGAGCAGAAT              GAGACGC ATG GGGGCTC              CTGATGGGTTTGTTT  38 108
CX034_RS05590 1139448 .. 1139506 - -13.8  -3.39895   TTGGCTAGCAATGAA GGCGGGCAGGGCG-CGCG-CGGCCGCGCA CCCC TGCGCGGGCGGCGCGGCGGCCT-CGCGGC GCGGTTTAGCTCTGC  77 31
CX034_RS05585 1138623 .. 1138651 - -18.2  -2.84602   GCCAGGGTACCAAAG        CAACGTGCCGGC ATCGA GCCGGCACGTCG        GGGGGAGGGATTACT  86 36
        murJ 1136963 .. 1136995 -   -12  -4.20516   TGTCGATCCAATAAA      TGCAAAGACCGGCC GTAAG GGCCGGTCTTTGTT      GTGATTTTCACTATT  91 65
CX034_RS05575 1135758 .. 1135781 -  -6.8  -3.58037   TATGAATTCGGCAAA          GTCAGACATTG TAT CAA-GTCCGAC          GGGGATTGCAAGCCC  58 74
CX034_RS05570 1135405 .. 1135422 - -11.3  -5.45802   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTTGCCGTA 100 69
CX034_RS05550 1132704 .. 1132714 -  -2.4   -3.7941   CATCGTGGAGAACAA                 GGGC GGC GCCA                 ACGGCAATATCGGCT  54 342
CX034_RS05505 NONE
CX034_RS05500 1122852 .. 1122864 -  -3.3  -3.07233   TGACAATGGGCAATA                TAGGC TTA GCCGA                TGCTCTTGGCGGCTT  42 18
CX034_RS05495 1121060 .. 1121079 - -13.6  -5.40072   CGCCGGGCAAAAAAA            GAAGGCCC CGCA GGGCCTTC             TTCCGGCATGGGTGG 100 44
        pdxA NONE
CX034_RS05485 1118504 .. 1118534 - -11.1  -3.06183   CTCAGCTCGATGGAA      GTGCGCGCCCG-CGC GCG GCGCCTGGCGCGC-C      AGTGCGGGCAGCTGG  62 459
CX034_RS05425 1108621 .. 1108639 -  -5.8  -3.14931   TCGAGGCGTTAGCAA             GCGTGGCC GAT GGCAGCGC             CGGGCCCGGGCAAGG  49 98
CX034_RS05420 NONE
CX034_RS05415 1106032 .. 1106066 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
CX034_RS05390 1100684 .. 1100702 -   -11  -3.55444   CCTTCACGCTGGAAA             CGCTCGAC CTG ATCGAGCG             CCGCATGGGCGAAAT  71 424
CX034_RS05380 1097938 .. 1097972 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS05355 1091593 .. 1091634 - -26.8  -3.54903   ATATAAAATGGATAA GACCCGATGCGT-GCCGGC AACGG GCCGGCGACGCATCGGGTC GGAAGGGAACGCGCC 100 62
CX034_RS05350 NONE
CX034_RS05345 1089794 .. 1089809 -  -3.3  -4.28548   ACGGAGTGATGAAAA              GAATC GTGCGG GATTC               AGCGGTGCGACATGC  63 24
CX034_RS05340 1088895 .. 1088920 - -20.5  -4.56597   CGGCCGGGTGAAAAA         GCCAAGCCGCC CGAG GGCGGCTTGGC          GGGATGCAGGCCCGG 100 68
CX034_RS05335 1088680 .. 1088725 -   -28  -5.84381   CCAGCAAGAAAAAAA CCAGCAAGAAAAAAGCCGCT TCCATG AGCGGCTTTTTTCTTGCTGG CCTTGTTGCTGGCCT 100 58
CX034_RS05330 1087476 .. 1087488 -  -3.3  -4.11216   GCGCGACTCGGAAAA                CCAGC TTA GCTGT                GAACTGTCAATAGGT  59 18
CX034_RS05325 1086258 .. 1086275 -  -5.5  -3.29144   CCAGCGGCGTCAGAA             CGCCTCT TCGT AGAGTCG              CGTGGCGTCGGCCAG  51 2
CX034_RS05285 1080075 .. 1080103 -    -3  -3.30441   GAGTATTGGGGACAA       CGCGGCACGGCAC AATT GTGC-GCGGCGAG        AGTTTCGCAGTTTCT  46 101
CX034_RS05280 1079201 .. 1079218 -  -5.5  -3.15544   GTCCAGCCCCAGCAA             CCGGCCGG CCA CCAGC-GG             CAACTCGATCTAATG  49 490
CX034_RS05270 NONE
CX034_RS05265 NONE
CX034_RS05260 1075209 .. 1075248 -  -6.5  -3.17075   CGGCTCGTAAGGCAA GGCCGTGACATGGCC-GTA CGAA TACAGGCCATCGCACG-CC  TGCGCCTTGCGCATC  51 275
CX034_RS05250 1073191 .. 1073201 -  -5.4  -3.25823   GCCTGTCTATATGAA                 CTTC ATG GAAG                 CCAGCTCGGAAAACG  51 6
CX034_RS05245 NONE
CX034_RS05240 1071072 .. 1071098 - -10.9  -4.52857   ACGTGTCATAGAAAA        CG-GCCAGGACA GCCT CGTCCTGGCGCG         CCAGCCGTCGCGGCC  95 46
        soxR NONE
CX034_RS05225 1069394 .. 1069419 -  -5.4  -3.34398   GCGCGGGCGCAAAGA         CCGGC-GCACC ATCGG GATACAGCCGG         CAATACTGCCTTACG  51 57
CX034_RS05220 1066998 .. 1067032 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS05205 1064552 .. 1064568 -  -4.3  -3.14132   CCGCTGCTCTACCAA              CTGAGCT AAC AGCCCGG              CGATTGCTGCCTGTC  47 140
CX034_RS05200 1064451 .. 1064480 - -17.3   -5.0925   GCCGAAAAGCAAAAA       GGCCGTTAGTGAC TACT ATCACTAACGGCC        TTACAAATCATGGTG 100 36
CX034_RS05155 NONE
CX034_RS05150 1057581 .. 1057597 -  -5.8  -3.05596   CATGCCCTGAGCGAA             GGCG-GG CCGG CCGCGCC              GCTGATCACGTATTC  48 332
        panB 1055793 .. 1055808 -  -3.2  -4.07568   TGCCTGTGGCGAAAA              CCCTACG GCG CGC-GGG              AGCGGGTTTGCAGGA  59 253
CX034_RS05135 1054149 .. 1054183 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 256
CX034_RS05105 1048248 .. 1048267 -   -10  -3.33261   CCTGAACCGCGACAA            CGT-GGCGG TGG CCGCCGACG            CCATCGCCAGCGTGC  63 72
CX034_RS05075 NONE
CX034_RS05070 NONE
CX034_RS05065 1039500 .. 1039520 -  -8.9  -3.46602   CCGTGGACATCACAA            TGGCGCAGG CGG CCCGCGCAA            GGTTACTCGGTACAA  60 84
CX034_RS05055 NONE
CX034_RS05050 1036572 .. 1036594 -  -6.9  -3.35679   CGGCGTGACGCACAA           GGCCGTGGC GCGTT ACCAGGGCC           TGCTGGTCGATGCCT  52 304
CX034_RS05040 NONE
CX034_RS05035 1033395 .. 1033417 -  -5.4   -3.7941   CACGGTCTACAAGAA           GCTGATCCGC ATC GCCGACCTGC           ACGACGTCAGCTCGT  58 115
CX034_RS05020 1030504 .. 1030534 -  -6.8  -3.39784   GGAGCCTGAAGAACA      TGGCCGAGCA-GC ATCCCG GCACGCTCGGCCC       CAGCCTGGTGCGCCA  55 431
        gcvA 1025985 .. 1026027 - -10.5  -3.56092   GGAGCATCGCGCAAA GCGGCGACCTG-ATGGTGGC CATG ACCATCGCGCAGGCCGCCGC GGCGCTCACGCTGCC  67 412
CX034_RS04980 1022889 .. 1022927 -  -9.6  -3.14132   GGCCTGGCCGAGCAA GTGCG-CCGC-CGCACCGG CATG CCGGTGCGCGCGGTCGG-C  GGCATCGCCGATCCG  59 213
CX034_RS04970 NONE
CX034_RS04925 1013645 .. 1013677 -  -3.4  -2.78463   ACCGCTGGCAGGAGA     CCCTCAG-CGGCC TGCCGTTC GACCGGCTGATGG      AGCCGGCCGAAGTGG  40 172
CX034_RS04875 NONE
CX034_RS04870 1005109 .. 1005119 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 64
CX034_RS04865 1003947 .. 1003967 -  -2.4  -2.59267   GGCAAGGACACCAAG            CTGCCCGA TTACG TCGTGCTG            ATCTCGACGCTGGGC  38 163
CX034_RS04850 NONE
CX034_RS04845 1000586 .. 1000601 - -10.4  -5.86332   GCAAGGCAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 58
CX034_RS04830  997838 ..  997857 -   -15   -4.8622   GCCGGCAATGAAAAA            GGCGGCTC ATGC GAGCCGCC             TTTTTCATTGCACGC 100 49
CX034_RS04810 NONE
CX034_RS04805  992642 ..  992670 - -14.6  -5.40072   GGCCGGCGAAAAAAA       GCCCCGCTGG-CG TGGT CGTCCAACGGGGC        GGCTGCATGGCGGGC 100 78
CX034_RS04800  991116 ..  991144 -  -5.2  -3.36569   GGAAGCCGCCAAATA       CATTGACCGCCGC CAGG GCGACGG-CGACG        ACGCCCATGGTGCGC  53 231
CX034_RS04790  989276 ..  989288 -  -4.7  -3.55622   GGGAACTGCTGGAAA                GCGGC GAG GCCGA                TGCCTGGAGCCTGGA  54 334
CX034_RS04780  986160 ..  986170 -  -6.8  -3.31144   TCGCCATGGTCAGAA                 CGAC ACC GTCG                 CCGTGGCGTAATAGG  54 9
CX034_RS04775  984760 ..  984776 -    -5  -3.15544   GGCCATCGTCATGAA              CGCCTC GGGTT GCGGCG              CCATGGTGAAGGAGT  47 489
CX034_RS04750  966505 ..  966542 - -16.4  -3.61398   TGTCGGTTTCAAGAA   CGGCACCGACGGCAAT GTGAAG ATCGCCGTCGATGCCA    TCAAGGCCGCCTCGC  85 523
CX034_RS04730  962846 ..  962867 - -18.7  -5.06414   GTGGCGCAATAAAAA           CGGCGCGCC TTGA GGCGCGCCG            GCATTCCGGGACGAA 100 49
CX034_RS04700  958612 ..  958628 -  -5.7   -3.4277   AGGCAAGACCTACAA              CGAGGCC AAG GACCACG              GGTTCATGTACCAGC  55 128
        chrA  955794 ..  955815 -  -3.6  -4.11216   GGGCCACGTGGAAAA           GCCGCTGCC GGTAT GGC-GCGTC           GTCTACGACGATCCG  63 280
CX034_RS04665 NONE
CX034_RS04660 NONE
CX034_RS04655 NONE
CX034_RS04650  948764 ..  948783 -  -2.8  -3.23216   GCGCACCACGAGCAA            GGCATAGCC TCG GGC-ATGGC            GTCGACGACGCTGAA  46 280
CX034_RS04640  947031 ..  947052 - -18.7  -3.28712   TTGGTTCGCCGACAA           CCCCCCGGG CTTG CCCGGGGGG            TTGTCGTTTGTGGCG  93 70
CX034_RS04585  935673 ..  935684 -  -5.8  -3.01712   GGCCGCGCGCCAAGA                TGGC CATC GCCA                 GCCGCTTCCGTACCC  48 303
CX034_RS04575  933366 ..  933376 -  -4.6   -4.0371   CATGTTCCATACAAA                 GGCA CGG CGCC                 GGCCATGGTGGACCT  63 455
CX034_RS04545  929724 ..  929752 -  -5.3  -3.87373   GACAGCGCGGATAAA       CCAT-GCGCCCA TCATGG CGGGCGCAATGA        ATTGTCCAAATGTGC  60 141
CX034_RS04535  927492 ..  927506 -  -3.5  -3.72576   GCGCGCCCGAGCAAA               CCGAC ATCAG GTCGA               AGCGGCCCTGCGCGC  54 348
CX034_RS04505  921535 ..  921549 -  -3.5  -3.94746   TGAGATTCAAGCAAA              CGCTGC GCGT GC-GCG               CCCTCCGGCACATTC  59 63
CX034_RS04500 NONE
CX034_RS04495  918683 ..  918697 -  -4.2  -3.14931   TTCACGTTCGATGAA               GTGGTC AAC GACGAC               GACACCGTGCTCGAC  45 266
CX034_RS04455 NONE
CX034_RS04450  910977 ..  910988 -  -5.8  -3.78022   GGTAGAGGGATGAAA                CAGG AAGG CCTG                 GGACCGCTACTGAAG  60 183
CX034_RS04440 NONE
CX034_RS04435 NONE
CX034_RS04430  907377 ..  907392 -  -8.2  -3.53444   TCACCGCGTTCGAAA              GCGCGG ATAT CCACGC               CGAGGCGCGGCGGCT  61 167
CX034_RS04410 NONE
CX034_RS04405 NONE
CX034_RS04400  901868 ..  901904 -  -5.1  -3.02144   GCAGGGGCTGGAATA    CATAGACGGGCTGGT GCTGTCG ACCAACCGGCCGATG    CTGACACTGATGACG  46 127
CX034_RS04390  897779 ..  897807 -  -4.4   -3.2614   CACCTTGCAGACCAA       CGCGACGCAGATG GTGC CGGCCGCG-CGCG        GCACCGCGGTGGCCT  47 226
CX034_RS04365  891904 ..  891939 -   -24  -3.73224   TTAGTTGTTACCAAA    TGCGGCGGGCGCGCCC TGCA AGGCGCGCCCGCCGAA     GTGATCGCTCTGAAT 100 47
CX034_RS04360 NONE
CX034_RS04355  887343 ..  887394 - -18.2  -2.83677   AATGAATTCAGCACA GCCATTTGATATGGCCCCCG-CAAC CTC GTCGGCGCGAGCCATTTCAAATGGC GCCGATAGGCGGCCT  86 141
CX034_RS04350  886611 ..  886633 - -20.6  -4.65895   CGCGGGACGGAAAAA           GCCGCCTGGC GGA GCCAGGCGGC           TTAAGGTGCTGCTAA 100 57
CX034_RS04345  885649 ..  885686 - -12.5  -2.64155   GCTGGCGGAAATCGA   CGCGGCCCTGCATGCCC TGCC GGGCGTGGCGGGCGGCG    CCTGCGCCGTGCTGC  62 290
         mpl NONE
CX034_RS04270  872772 ..  872787 -  -2.4  -2.64354   GTACATAGTGAGAAT              CCATCG GGCG CGGCGG               CGTCAGGAGCGCCCC  38 72
CX034_RS04265  870824 ..  870843 -  -2.7  -2.76468   CAGGATCGAAGAGGA            GGAAGCG GAGCGT CGCACCC             GTGCATTTTAGGGCG  40 61
CX034_RS04260 NONE
CX034_RS04255  869037 ..  869047 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS04250 NONE
CX034_RS04245  867104 ..  867127 -  -5.2  -3.28712   CGGCTCGCCCGACAA          TCCGGGCC TGGTGTTC GGCCTGGA           CCGTGGCGGATGCTG  49 374
CX034_RS04220  863090 ..  863111 -  -9.3   -4.1891   GGCCGGCAAGATAAA           GCCGCTGGC GGTG GCCGGCGAC            AAGCGCCTGAGCGAC  75 332
CX034_RS04195  856756 ..  856784 -  -8.7  -3.51032   ATTCGTGAAGCACAA        GATCCTGGACGCC ATC GGCGACCTGTATC        TGCTGGGCAAGCCGC  61 307
CX034_RS04110  835619 ..  835629 -  -4.6  -3.30771   GCACATGCTCTACAA                 CCGC AAT GCGA                 TTTTCACGGGCGGCG  49 481
CX034_RS04095  833318 ..  833330 -  -7.7  -2.54523   TGAGACGGGAAGGGA                CGTAC GCC GTACG                CCCTTTGGCCCGATC  50 43
        hppD  824120 ..  824140 -   -14  -3.60151   CGCCCGAAATGACAA            GGCCCACC GCGAG GGTGGGCC            TTACTCGCGCCAGGC  78 46
CX034_RS04035  820226 ..  820238 -  -9.1  -3.18681   GGGCAAGGTCATCAA                CTGGC GCG GCCAG                GGCGAGGTCGTGCTC  59 384
CX034_RS04025  818501 ..  818514 -  -5.2  -3.21099   CTGCTCTAGCATCAA               CGCG GTAACT CGCG                CGCAGTATTCATGCA  49 450
CX034_RS04005  816330 ..  816345 -  -6.1  -5.24129   GGCGGGCACAAAAAA              GGCAC TTGGTG GTGCC               GTTTGGTTTTCTGTA  90 220
CX034_RS04000  815767 ..  815781 -  -4.2  -2.94411   AGGTTGTCAAACAAT               TCCATG ATT CATGGT               CTCCTTAGTTCATGC  44 30
CX034_RS03995  814211 ..  814228 - -14.1  -6.11644   CGAGGCAAAAAAAAA             CCGGGCC CGAG GGCCCGG              TTCGCGCCGGCCGGC 100 63
CX034_RS03990 NONE
CX034_RS03985  811401 ..  811440 - -26.5  -3.05384   GGCGGCCTGATCGAA  CG-GGCGCCGGCCGCCCG GGCTG CGAGCGGCCGGCGCCGCG  GCCTCAGTCGCGCAG 100 29
CX034_RS03955  807371 ..  807393 -  -6.8  -2.53911   TGAAGCTGGAATTCA           CCGACGACGG CAT CCGCCGGCTG           GCCGAACTGGCATTC  44 243
CX034_RS03925 NONE
CX034_RS03920 NONE
CX034_RS03915  800130 ..  800186 -  -7.8  -2.91264   GCGTCGATCCACATA TGCGGATGCGCACCGGCGCCGGCCGCCC ACA GCGCGCCCAGCGCC-GT-CAGGGCCGCA AGGCGGCGGCGAGTT  52 15
CX034_RS03910 NONE
CX034_RS03905  798545 ..  798557 -  -4.7  -3.23637   AACATATCAATTGAA                TCCGG CAC CCGGG                CGTGCAAAATTCGTC  49 56
CX034_RS03900  796038 ..  796061 -    -3  -3.85698   GCCGCGCTGGACAAA          TGGTTGCAGG CGCG CCCGCAACTG           GCTGCCGCCGGCGCC  56 362
CX034_RS03870  790488 ..  790506 - -17.4   -4.4078   CGCGGCCAAGCAAAA             CGCCCCGC CAG GCGGGGCG             TTTCGCGACACGGGA 100 48
CX034_RS03865  790151 ..  790165 -    -7  -3.08371   GACATGGCCAAGACA               GGCCGC CGT GCGCCC               CTCAGTAGTTGTTGC  52 27
CX034_RS03860  788816 ..  788849 -    -6  -3.34005   AATGAAGCCGGACAA     CGCGTA-GCACCATG ATCCG CACGGCGCGTACTCG     CCTTTCCCGCTTCAT  53 223
CX034_RS03855 NONE
CX034_RS03850 NONE
        metF  786056 ..  786066 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS03840  784924 ..  784936 -  -6.2  -3.01924   GAGCGCCGCCGAACA                GGCC TTTCT GGCC                GCGTTCGAGCGCTTC  48 141
CX034_RS03815 NONE
CX034_RS03810  777281 ..  777301 -    -4  -3.57561   GGCGAACTGTTCAAA           GT-GCTGGCC GTG GGCC-GCGAC           ATGCCCGAACCCTTG  51 94
CX034_RS03790  771981 ..  772020 - -15.6  -2.64099   GGCTCCCAGCAGAAT  GGCGCAGCCGGCCAGCGCC AGC AGCGC-GGCCGCCCGCGCG  CGGGCGGCCCGGATA  74 277
CX034_RS03785  770489 ..  770502 -  -3.7  -2.62263   AGCGCGCCTACAGCA               GCGGC TCGA GCGGC                AGCAGCGAGAACAGC  40 4
CX034_RS03760  765836 ..  765878 - -11.9  -3.18681   GGCGAAGCGCAGGAA CCCGCGGCCCGGCCGGCCGGC GAC GCC-GCCACCCGTGC-GCAGG TCCAGGCCGAACTGG  64 354
CX034_RS03685 NONE
CX034_RS03680  753011 ..  753025 -  -3.4  -3.96327   ACGGTCGAGGAGAAA               GACCGG GCG CAGGCC               GCCATGAATTTCTGC  58 202
CX034_RS03670 NONE
CX034_RS03665  749611 ..  749645 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 280
CX034_RS03645  743620 ..  743657 -  -7.6  -3.03124   GCTGATTCTTGAACA   CGGCTTGGTTGCCCGCC CAGCC GGCCG-CAACCTCGCCG   TTCCGGTTCAGCCAC  53 33
CX034_RS03640  740972 ..  741008 - -12.9  -2.72144   CGATTCTTTCGAAAC    CCAGGACCGTCCGCCAG CGC CTGGCGGACTGCGCCAG    CCCTTGGGCATCAAA  67 73
CX034_RS03630  739525 ..  739539 -  -4.9  -2.88249   GATATTGGTCACATA               GCGGC ACTCG GCCAC               GCCAGGCAGCGGTGT  44 173
CX034_RS03610  736890 ..  736902 -  -2.6  -4.71426   CGGCGATGAACAAAA                GGCC GCCAA GACC                ACCGCCTTCGACTTG  76 434
CX034_RS03510 NONE
CX034_RS03505  715035 ..  715045 -  -8.2  -3.53012   CGCGGCCGGCGCAAA                 GGCC GCC GGCC                 GGGCCCATCGATGCG  62 50
CX034_RS03500 NONE
CX034_RS03495  712894 ..  712904 -  -6.8  -3.85817   ACGGTGCCGCAGAAA                 CTGG CGG CCAG                 CGCCGCCCCGCATTT  63 189
CX034_RS03485  710592 ..  710602 -  -2.4  -4.19238   TTTTGAATCGGAAAA                 TGGC CGG GCCG                 CAATGCCCAACGGCG  62 92
        fahA  709137 ..  709164 - -21.4   -4.8622   GCCCGCAAGGAAAAA        GGTGCCTGTCCC GGTT GGGACAGGCACC         TTCGGCAAGCCGGAG 100 108
CX034_RS03450 NONE
CX034_RS03445  699171 ..  699201 -  -3.9  -2.57132   CTGCTGCGCGACAAG       GGCGTGCGG GAATTCGTCGAGG CCGCGCGCC       TGCTGCGCCAGCGCG  40 506
CX034_RS03390 NONE
CX034_RS03385 NONE
CX034_RS03380  684412 ..  684430 -  -4.4  -2.62184   CCTCGCCCGAGATCA             TGGAGCGC GTG GTGCACCA             GGTCATCCGCGAGGG  40 362
CX034_RS03370  681335 ..  681368 -  -5.1  -3.21099   CGGCTTGAGCACGAA     GGTGTTGCCGCAGGC CAGC GCCACCGGGAACATC      CAGCACGGCACCATC  49 495
CX034_RS03360  678454 ..  678474 -  -3.8  -3.11459   AATACCAGCATGGAA            CTCCCTCG GGTTG CGCGGGCG            GGCCAGGCCCGCCCT  45 46
CX034_RS03355 NONE
CX034_RS03350  676299 ..  676352 - -15.3  -3.01712   TGGGCTCCTGGAACA CCATGGCCATGCGCGTGGCGCGCAG TTCGCG CCGC-CGCCGCGCGC-TGGCCGTGA CGATGTCCTCGCCCA  77 291
CX034_RS03340  673510 ..  673520 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS03335  672260 ..  672276 -  -2.1  -4.62783   GACGTAGCCGAAAAA              CGGCGGA AAT TCATCCG              GAAACTGGCTAAAAG  70 255
CX034_RS03285  665034 ..  665074 -   -14  -2.80816   TCGCCAGCCACGATA GCCTGGCAGCT-CAGGCGC GAAT GCGCCTCCAGCCCCCAGGC  GCGGTCCAGCAAGGT  71 268
CX034_RS03260 NONE
CX034_RS03255 NONE
CX034_RS03250 NONE
CX034_RS03245  658193 ..  658220 -  -8.2  -3.78775   TGCGCCACCAGCAAA        GCCGCGGCCGCC CGCT GGCGGGCGAGGA         CGCCGACAAGGTCAT  67 131
CX034_RS03170 NONE
CX034_RS03165 NONE
CX034_RS03160  640668 ..  640682 -  -7.8  -3.30771   GGACATGGCGCAGAA               CAGGCC GTC GACCTG               CGCCATGGCCAGGCC  56 163
CX034_RS03150 NONE
CX034_RS03145  637493 ..  637527 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS03130  633193 ..  633215 -  -4.8  -4.67982   TGCCACCGAAGAAAA           CCAGGCCATA CCC CATGACCTGC           CAGACGGATAAGGCC  75 224
CX034_RS03120  631100 ..  631123 - -13.8  -2.54702   ACAGACGCGAAGGCA          GCTCGCTGGC CACC GCCAGCGCGC           GCCGGTGCGCACCCA  69 511
CX034_RS03105  628450 ..  628460 -  -8.2  -3.53012   CTGCGGGCGCTGAAA                 CGGC CGT GCCG                 CGTCACCATCCACAC  61 275
        gloB NONE
CX034_RS03085  625128 ..  625153 -  -3.3  -2.71712   TTGCCTTGCGGAAAG         GCCGCTA TTGTAGGAATTT TAGCGGC          TTGGCGGACGGGCGC  40 64
        fabI  624252 ..  624280 -    -6  -3.78419   GGAGGAAAGATACAA        GGCACCGG AGGTCGAATTTGG CCGGTGCC        AGTCCCCCTACGGGG  62 57
CX034_RS03075  622996 ..  623025 - -17.9  -2.62616   CGATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACCC        TCCCTGCGGGGACAG  85 56
CX034_RS03065  621270 ..  621303 -  -8.9  -3.53091   ACCTGGCCGGCGAAA     TGCTGC-GCCAGGC CAGCGGC GCCTGGTTGCAGCA     CGTGCCGTATCGAGG  61 460
CX034_RS03045  617522 ..  617532 -  -4.6  -4.12188   TCATCAGGGCGAAAA                 CCGG TAG CCGA                 TGCCCCACACGGTCT  62 3
CX034_RS03040  616031 ..  616083 - -14.1  -3.33696   GTGTTCGGCAAGGAA CGCCGGCCGGTGCCGCTCTTGCCGCC GCCG GGCGCCT-GA-CGGCG-CGGCCGGCG GGTCAAGCCTTCGCA  75 28
CX034_RS03025  611700 ..  611737 - -16.9  -3.18274   TGGATTGGAATGGAA   GCGCCGGCCGCCGGCCCG AAG CGGAG-GGCGGCCGGCGA   CAGCGGATTGTCGGG  84 85
        minC  610727 ..  610745 -  -2.4  -3.86346   TTATGTGCGTACAAA             TCGCGTTA TCG TAAAGCAA             AAAGCGTATGAAGGC  54 87
        minD NONE
        minE  609440 ..  609458 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACTGGTG 100 191
CX034_RS02960  599107 ..  599126 - -10.6  -5.50499   TTACAGGTAAAAAAA            CCGCTGGC CCTT GCCGGCGG             TTTTTTTATGCGCGG 100 49
        uvrA NONE
CX034_RS02945 NONE
CX034_RS02940  591009 ..  591051 - -14.1  -3.07935   ACGGCAGGCACGGAA GTTTGCCGGTGCCAGTCCCC CTGC GGGGACAGGCACCGG-AGTC AGTGGTATTGCACCT  72 24
CX034_RS02935  589335 ..  589350 -  -2.4  -3.01712   GGCGGGTCGTCAATA              TCGGCA GCCG CGCCGC               GCTGGGCAAGCCCGG  41 437
CX034_RS02920  586223 ..  586257 -  -5.4  -3.53811   GGGACTGCGGGCAAA     GAGCCGGGCGGCGGAC ATG GTCAGGCGGCAGGCGC     GGCGGCGAGCAAGGC  54 11
CX034_RS02915  584980 ..  585004 -  -9.1  -3.01712   GCGCCGGCGGCAAGA          CCGACCCGCTG GCG CTGCGCGCCGG          CGACCTGTCCGAAGC  55 524
CX034_RS02905 NONE
CX034_RS02900  582286 ..  582303 -  -2.6  -3.05463   ACCGGCTGGATGGAA             GGCTGT CAGTGT ACCGCC              AACGCCGCGCCCGCG  41 52
        pdxH NONE
CX034_RS02890 NONE
CX034_RS02885 NONE
        purU  579003 ..  579017 -  -5.6  -3.05384   CGTCCCTGCAGGCAA               CGGCCT TGC AGGCGG               CCTTGCGCCATTTCG  46 65
CX034_RS02855  573145 ..  573169 - -12.8  -3.65902   GCGATGCCAGTGAAA          CGCGACGCGC CGGAT GCGCGTGGCG          CGAAACTGCACTTGC  77 90
        apaG  566867 ..  566897 - -10.3  -4.13945   ATGCGGATCGGAAAA       TCACCGTGCCGGG AGGAG CCCGGCTCAGTGC       AGTGTACGCGGCATG  78 19
CX034_RS02815 NONE
CX034_RS02810  564385 ..  564409 -  -3.4  -3.08032   TGCTCCTGAAAACGA         CGGCC-CGCTC AATT GCGCGAGGCCC          CTTCGATGAGTTGCC  44 9
CX034_RS02805 NONE
CX034_RS02800  562346 ..  562380 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 207
CX034_RS02780  558864 ..  558878 - -11.4  -3.57144   GTGCGCACGCGCAAA               CAGGGC GAG GCCCTG               GCGCTGGCCACCGTG  71 267
CX034_RS02770  556460 ..  556479 - -16.4  -3.75153   GCGCGCCAATGGAAA            CGCCGCGC ATGC GCGCGGCG             TCGGCAATCGGGCGG  88 81
CX034_RS02750  553086 ..  553098 -  -3.3  -3.04792   TCACGATGGTTAATA                TCGCT ACG AGCGC                TTGCGCAGCATCAAT  42 16
CX034_RS02745  552100 ..  552120 - -14.7  -2.52676   GATCTTGCTAACGGA            CGCCCGCCA CCA TGGCGGACG            CCGAAAATTTGGGAT  71 40
CX034_RS02740 NONE
CX034_RS02735 NONE
CX034_RS02730 NONE
CX034_RS02725  548960 ..  548998 - -12.2  -3.53012   GCTTTCCTGTTGAAA   CGGCTTGGCGGGTTCAGC CGG GCTGTCCCCGCCCTACCG   TAGGATGGGCGGCAC  74 67
CX034_RS02720 NONE
        atpD NONE
CX034_RS02710  546101 ..  546128 - -18.6  -2.91924   GGATGCGCCAGAAAC        GACAAAGGCGAC CGAA GTCGCCTTTGTC         TGCCTGACGCGGCGG  89 58
CX034_RS02705  545016 ..  545045 -  -2.2  -3.09581   CAAAGGGGCAACAGA       CACGACTATCC TTGGTGATC GGA-AGCCGTG       ATTTTACTGCCCTGG  42 74
CX034_RS02700  543733 ..  543750 -  -4.1  -3.60048   CTTTGGGGAAAAAAC             GCTAACA AGGG TGTGAGC              TTTCAGGGTCGTGCC  51 217
CX034_RS02695  541505 ..  541531 -  -5.7  -2.62184   TGTTCGGTCAGAGTA        CGGGTTCGAGCG CCGG CGC-CGGCCCCG         CTCAGATCTCCAGCG  44 27
CX034_RS02690  539376 ..  539386 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS02685  538267 ..  538308 -  -8.5  -3.14132   CTGTCCCTGCACCAA GGGCGTGGGTGCCTGTCCC CGTG GGGACAGGCACCTTGTTCC  CCCCTCCGCAACGCC  56 89
CX034_RS02635  527146 ..  527158 -  -9.1  -3.33696   GCTGCGCGTAAGCAA                GCGCA TGC TGCGC                CAGGCCGACCGCGCC  59 219
CX034_RS02620  524749 ..  524763 -  -2.7  -4.21607   TCGAGGGAATATAAA               GTGGG ATGGG CCCGC               GCGGCGTCAGATGCG  63 32
CX034_RS02615  523567 ..  523581 -  -3.4  -3.78934   CGGCGCGCACAACAA               CGCGGC TGC GCTACG               CGTACGCCTTGAGGG  56 21
CX034_RS02600  520131 ..  520144 -  -2.3  -3.07935   ATTCTATCCATTGAA               CTACG GGCG CGAAG                AGGCGACATTGTACC  41 184
CX034_RS02595  520065 ..  520080 -  -4.6  -3.53224   TAGGGCCTTGGGAAA              CTGGCG CGCC CGACAG               GAATCGAACCTGTAT  52 11
CX034_RS02590  518967 ..  518977 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS02585  517798 ..  517820 -  -5.5  -3.15579   GCAACCGGGGAGCAA          GGCGCACGCC GGCC GACGC-CGCC           ACGGCGCATGGGCAG  49 168
CX034_RS02580 NONE
CX034_RS02575 NONE
CX034_RS02570  514249 ..  514285 - -10.9  -3.15544   TTCGACGCCGACGAA   GCGCGGCGCA-TCG-GC TTCGT GCGCGACTGCGCCGCCC   AGGCGCAGTGGCCCG  64 217
CX034_RS02550  510849 ..  510901 - -27.1  -3.02144   CCAGGCGCTCGAAGA CGCCGCCTGAAGCGCGGCGGCCGC CAGCCC GCG-CCGCCGTGCTTCAGCCGGCG TTGGGCGCGGCCCAG 100 16
CX034_RS02535 NONE
CX034_RS02530  506290 ..  506319 - -11.3  -2.62263   ACGTCGCCGACACCA       GCGCCATCCAGCG CACC CGCTGGCCGGCGT        CGGGAAACAGGTCCG  59 509
CX034_RS02520  503972 ..  504024 -  -9.2  -3.04501   ATCAATTCCGCAAGA GCCTCATGCAG--GCCGCCGCGCGCG GCGTG CGCGTGCGGCTGCTACTGCA-G-GGC AAGCCCGAATACCGC  55 403
CX034_RS02465 NONE
CX034_RS02460 NONE
        lptC NONE
        lptA NONE
        lptB  488543 ..  488558 -  -3.2  -3.66288   TATTGGCCAATACAA              GTTGCG CTAG CGCAAG               ATTGTGTACGTTTGA  53 108
CX034_RS02435 NONE
CX034_RS02430  486275 ..  486287 -  -4.7  -2.71144   CAGCTGGGGCAACCA                GGCCG GCG CGGTC                ACGCCGCTGGACGTG  43 127
        rapZ NONE
CX034_RS02410  482254 ..  482264 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS02405  480800 ..  480834 -   -10  -3.41229   ATAGTTCGAGCAGAA    CCTGGCGCGC-TCGC TCAGCG GCGAGGCGCAGCAGG     ACCCGGCGCAACCGG  65 441
CX034_RS02345  469814 ..  469835 -  -7.3  -4.61873   GCGCACAAATGAAAA           TGCCCAG TGCAAGGG CTGGGCA            TCGAATTCTTGGTGG  79 35
CX034_RS02305 NONE
CX034_RS02300  455347 ..  455402 -  -7.4  -4.18197   AGGCGTGATCGAAAA GCA-GGTGGCCATCGTCGCGCCGGCCA AGG TGGGCAGCACGCTGACGGCCATCGTGG AAATCACGCTGGACG  73 304
        glmS  452846 ..  452884 -  -8.1  -2.56715   ACCTGGACGAATGCA  CCATCGGGCGCGACAAGGC CGT GCAGCG-CGCG-CCGATGG  ATATCGCCCGCCTGC  48 330
CX034_RS02270 NONE
CX034_RS02265  446592 ..  446646 - -20.2  -2.50779   ATGACAAGCCAACAG CATGCCGGCG-GC--GCGTCGCGGCAA GGCC TTGCCGCGACGCATGCGCGCCAGCCTG GGCCGCCTACTGTCA  95 38
CX034_RS02260  445132 ..  445143 -  -7.2  -3.51934   GCCCCTGCAGAAAGA                GCGC TGGA GCGC                 GGCGGTCGATGTGGT  58 449
CX034_RS02250 NONE
CX034_RS02245 NONE
CX034_RS02240 NONE
        argE  440454 ..  440503 -    -2  -3.50133   TAGTTGTAGAAAAAG CGCCACCGTCATGGA--CCGGACC CGAA AGCCCGGCGTTCGTGACGGGGGGG TACATCACCACTACC  48 74
CX034_RS02230  439369 ..  439393 -   -20   -3.3514   ACCGACACGGCACAA          CGGGCGCCCG GGCCG CGGGCGCCCG          CCGCGATCAGTCGAT 100 32
CX034_RS02225  438035 ..  438052 -  -5.5  -2.71712   GCCTCTCGCTCAAAG             TCCCAGG ATGG CCTTGGA              AATGATGTTCTTCTG  45 2
CX034_RS02220  436724 ..  436743 -  -3.4  -3.65812   CCCCGCCGAACACAA            CGTCGGCC ACCT GTACGACG             CCAAGCCCGAACTGA  51 167
CX034_RS02205  432800 ..  432810 -  -8.2  -3.35813   GGTGATGGGAACGAA                 GCGC TCG GCGC                 CGAAGAAGTTGCCGA  60 176
CX034_RS02195 NONE
CX034_RS02190  431070 ..  431104 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS02175  427079 ..  427096 -  -3.3  -3.08464   CTACCACTGAGCTAA             CCACCCC GAAA GAGGCGA              AATTCTAGCACGAAA  44 73
CX034_RS02170  426967 ..  427001 - -19.5  -3.54489   GGAAGCGGAAATGAA    GAAGGGCCGGT-GCTT TTGC AAGCGACCGGCCCTTC     TGGGATGCTGGTGGG 100 34
CX034_RS02165  426453 ..  426479 - -11.5  -2.78384   CGTTGTTCGACGATA         GCCCAGGCCTG GCGCA CAGGCCCGGGG         ATGCGCACAGACAGC  62 101
CX034_RS02160  425003 ..  425048 -  -7.4  -3.86822   GAAGCCTTCGAGAAA CTGGGCGCGCCGCC--CCTGCC CGAG GGCAGGTAGGCGGCTGGCGCCG GGCTAGAAGAAGCTC  66 28
CX034_RS02135 NONE
CX034_RS02130 NONE
CX034_RS02120 NONE
CX034_RS02115  415916 ..  415953 - -14.7  -3.15699   ACGCATCTATGAAGA   TGCCGTGGCCGACTTCG TACG CGACGCCGGCCGCGGCT    ATGCCGGCCGCCAGG  77 87
CX034_RS02090  412344 ..  412371 -  -3.9  -2.78996   CATCCTGATCGAAAT        GGGCAGGCCCG TCTGCG CGCGCCGTCCC         GCGAACCGCCGCTGC  41 41
CX034_RS02085  411265 ..  411303 -   -13  -3.52093   ATATTGGAACCATAA   TCCGCGGCACCCGGCCCA TAT TGCATCCGGCGCCGCGGA   TTGCGGGCGGGCCAT  77 53
CX034_RS02080 NONE
CX034_RS02075 NONE
CX034_RS02070  407558 ..  407568 -  -5.4  -2.94924   CCTGGATGGAGAAAG                 CTCT ACC AGAG                 GCTCATTCCTTGTAC  47 28
CX034_RS02065 NONE
CX034_RS02060  404869 ..  404897 - -11.7  -3.81755   ACGCGTGAAACAGAA        GCAGGGTGTTCAC GAT GTGAACACCCAGG        GACGGGCGCCGGCTT  79 59
CX034_RS02055 NONE
CX034_RS02050 NONE
CX034_RS02045  401583 ..  401599 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  60 494
CX034_RS02030  398646 ..  398670 -  -9.2  -3.64822   ACCGGTGTAGCCAAA         GCGGGCCAGCG TCTG CGC-GGCCAGC          CGCGCGCGCGGGTCG  68 347
CX034_RS02020 NONE
CX034_RS02015 NONE
CX034_RS02010  394114 ..  394170 -  -6.6  -3.14051   TTATTTCCAGGAACA CCCG--CATCCCACCGAAGGCACGAT ACGCACG ACCGCGCCGCCGGTCGAATGGTCGGG CACGCCCGGCGGGTA  50 237
CX034_RS01990  390722 ..  390732 -  -3.2  -2.78816   TCATCGGCCATGACA                 CATC GCT GACG                 GGGTTTGGCGGCGGG  40 151
CX034_RS01975 NONE
CX034_RS01970 NONE
CX034_RS01965 NONE
CX034_RS01960  386500 ..  386512 -  -3.3   -3.6968   CGAGAACCCCAAGAA                GCTGA AGT TCCGC                GAACTGGAAGCCGCC  55 436
        argB NONE
CX034_RS01945 NONE
        slmA NONE
CX034_RS01935 NONE
CX034_RS01930 NONE
        gatC NONE
        gatA NONE
        gatB  371107 ..  371125 - -10.2  -2.62515   AATCGGTCGAGATCA             TCCGCGCC GCC GGCGCCGA             GCCCGCCGCGGTGCT  55 359
         xth  369446 ..  369457 -  -7.2  -4.25104   TTCGTCGGACGAAAA                GCCG GAAT CGGC                 CGCAAAACCAGTGCT  72 313
CX034_RS01875  367662 ..  367691 -   -18  -3.93262   CCCAACAAATGGAAA       TGCCGCTGACCA TCGTGC TGGTCAGCGGCA        TGATCACCGGGTGCG 100 313
CX034_RS01860  365003 ..  365046 - -11.6  -3.15544   GGTCAGGCGCATCAA GACCGGCG-CCGGCGCGCA TGCGTTC CGCGCGCAGGGCGACGGCC GCCATCTGTTCGTCA  64 284
CX034_RS01820 NONE
CX034_RS01815  355923 ..  355933 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 73
CX034_RS01810  354702 ..  354746 -    -4  -2.78463   AGTGGCGCGAGCAGA CGCTGTCCGAAGCGGGCGAC CTGGT GCTGGCCGCGCCGGATACCG GCCTGGACGCCAAAG  40 198
CX034_RS01785  352408 ..  352442 -    -4   -4.9792   CATTTTAGATAAAAA     CCGCGCGCATGCAACC GGT GCCTGCCGGCGCGCCA     GCGCCGACGGCCCGC  79 115
CX034_RS01780 NONE
CX034_RS01775  350788 ..  350801 -  -2.3  -2.64616   TTCCCATCGAGAGCA               GGCAC GAGC GTGCT                TGTGCTGTCGATGAC  38 120
CX034_RS01770 NONE
CX034_RS01765 NONE
CX034_RS01760  346116 ..  346168 - -16.2  -3.05844   TCGGCCAGCGGAATA TGCACCGCGCCGCTGGCGGCGG CGAGAATGC CCACCGCCAGCAGGGCAGCGCC CAGCGCCAGCAGCAG  79 60
CX034_RS01755 NONE
CX034_RS01750  344398 ..  344423 - -11.9  -3.57144   TGCGCCACCTCGAAA         CCGGCGC-CTGA GGT TCAGCGCGCCAG         CACCAGCAGGCGGCC  72 14
CX034_RS01740 NONE
        alkB  342382 ..  342398 -  -9.3  -2.52464   TTGCGGCCGAATTCA              GGCGCCG GCG CGGCGCA              GCGTGAAGTTGATGC  54 6
CX034_RS01730  341767 ..  341777 -  -8.2  -3.53012   TGCCGGCGTTGCAAA                 CGGC TCA GCCG                 GCCTCGCGCAACAGC  62 19
CX034_RS01725  340196 ..  340213 - -12.7  -3.06915   AGGGACGCTACGCAA             GCCGGCT GGTC AGCCGGC              CCGAGCATCGCGACG  66 346
CX034_RS01700 NONE
CX034_RS01695  336061 ..  336075 -  -8.5  -2.56596   GTCGGGAGCAATCTA               CGCGG GTCGG CCGCG               CGCTGTCTGTTTACT  52 64
CX034_RS01690 NONE
CX034_RS01685 NONE
CX034_RS01680 NONE
CX034_RS01675 NONE
CX034_RS01670  331132 ..  331166 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS01660 NONE
        lptG NONE
CX034_RS01650  326932 ..  326944 -  -4.7  -3.01712   CGTTCGTGGCCAAGA                GCGAG ATC CGCGC                CTGGCCGGTCATCGG  46 510
CX034_RS01615 NONE
CX034_RS01610 NONE
CX034_RS01605  320169 ..  320207 - -10.2  -5.80951   ATCCAAAACAAAAAA   GTGAAGCCCATCGGATCG TAA CAATCCGATGGGCCGGGC   CCTGCCCGTCGCGGC 100 45
CX034_RS01600  317859 ..  317871 -  -2.7  -2.80074   GTTTTTACAAGAGGA                TCCAT GAC ATGAA                AATTCTGCAACCGCC  39 516
CX034_RS01535 NONE
CX034_RS01530  304027 ..  304043 -  -9.3   -2.7185   ATCATGGTGGAATTA              TGCGCCG GGC CGGCGCC              GGCGTGGCCGGCCTG  55 41
CX034_RS01525  302818 ..  302852 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  48 191
CX034_RS01515  301663 ..  301678 - -11.8   -5.4505   TTGGCCAACAAAAAA              GCCGCC CGGA GGCGGC               TGGAAGGTCGGCTTC 100 42
CX034_RS01510 NONE
CX034_RS01505  299716 ..  299739 -  -3.1  -3.51934   CCTGGCTGAGAAACA          TCG-AGCCGA ACTTG CCGGCCCCGA          TCAACGCCACCCGCA  49 219
CX034_RS01490 NONE
CX034_RS01475  292130 ..  292160 -  -8.8  -2.66316   GCGGCGAGCAGATCA       CCGCCGTGGCGCTG GAC CTGGGCTACGGCAG       CCCGGGCGCCTTCAC  51 151
CX034_RS01465 NONE
CX034_RS01460 NONE
CX034_RS01455 NONE
CX034_RS01450  286978 ..  286988 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS01445  285623 ..  285651 -    -6  -3.08679   CCGCGTGATGGAAGA       CATCGTGCGCACGG GCG CCGTGCGG-CG-TG       GCTGGTTCGGCATCG  48 348
CX034_RS01435  283896 ..  283922 -  -7.9  -3.23853   CCGCCGCAAGGAAGA        GGCCGCGCCGGA AGCG CCCGCCGC-GCC         GCCGGAAGATGTCAC  53 114
        petA NONE
CX034_RS01420 NONE
CX034_RS01415  280297 ..  280328 - -18.8  -3.94846   GTATGAAAAGCGAAA      GGCCAGCGCC-GCCA AAT TAGCAGGCGCTGGCC      CCGATTGCCAGGCGG 100 123
CX034_RS01410 NONE
CX034_RS01405  279125 ..  279149 - -17.2  -3.16191   CTACACCGGCATGAA          CGCAAGCGGC GCATG GCCGCTTGCG          AGGGACTGCATTGTA  84 73
CX034_RS01400  279005 ..  279025 - -13.3  -5.07011   TACATAAACGAAAAA            GCCGTCTCC AGA GGAAACGGC            CTAGATCGTTGATTT 100 44
CX034_RS01385 NONE
CX034_RS01380  276755 ..  276794 -  -8.6  -3.02144   TCAGCGCCGCCAACA  CCATGCGCCTGG-ACAACA TGG TGCTGTACCAGACGCCCAG  CCTGGATGGTTTCAA  55 372
CX034_RS01310 NONE
CX034_RS01305  262642 ..  262692 - -13.4  -2.53876   TCCCAGCGGAATCCA GGGCATCGTGATCGG-GCCGCACGGC CTG GCCG-GCGGCGCCGATC-CG-CGCCG CGAAGGCCTGGCGCT  67 58
CX034_RS01295  259921 ..  259936 - -11.8  -3.57144   CCGTGCACGCCGAAA              GCGCCC CGCG GGGCGC               TTTTTTCTTGCGCGC  72 46
CX034_RS01285  257764 ..  257786 - -12.7  -3.24747   GGGCGACATGACCAA          CGCGCGCCGC TAGA GCGGCGC-CG           GGCGCGTCAGTTGGG  71 32
CX034_RS01275 NONE
CX034_RS01270  254242 ..  254279 -    -9  -3.35679   CGCGGGCAGTGAGAA   GCGGGCGCCCGTCCCC GTTGGG GAGGAGCGACACCCGC    GGCAAGGGTGCCTGT  63 127
        mutL NONE
        miaA  250652 ..  250681 - -23.7  -2.78816   TCATGGCGTATGACA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TTGCTCAGTCGGGCA 100 30
CX034_RS01245 NONE
CX034_RS01240 NONE
        pcnB NONE
CX034_RS01230  245861 ..  245874 -  -4.5  -3.38326   CAGAAGCTGAACGAA               GCGTCG GCG CG-CGC               GCTGAACACGCCGGC  49 189
CX034_RS01210  240288 ..  240319 - -15.9  -3.76413   TTGCAAAATGGGAAA      GGCATCCGGTGCG TGCGAG CGCACCGGACACC       ATTGGACGGCCTGCG  90 42
CX034_RS01205  239307 ..  239317 -  -2.4  -3.29144   CGACCTGGCGCACAA                 GGAC CTG GGCC                 TGGCGCTCGAACTGG  44 257
CX034_RS01185  236325 ..  236335 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS01180  235204 ..  235218 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
        thiC  229271 ..  229285 -  -8.5  -3.02263   ACACCTCGGTCAAGA               CCGCC TACAC GGCGG               CCTGACCCGCATGGC  55 72
CX034_RS01135 NONE
CX034_RS01130  224034 ..  224083 -  -9.8  -2.82015   GCCATAGGCAGCATA TCGGCGACGGCGGCGCC--GCGGA TTTT CCCGCTTGGCGCGGCCGACGCGGC GCCGGTAGGCATCGC  56 396
CX034_RS01120  222472 ..  222484 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTACCCGGACTGCCG  50 368
CX034_RS01110  218815 ..  218843 -  -2.3  -4.92756   ATGATCAAAAACAAA        TCATCCTGGGACG CAG CGCCTCAAAATGT        TGGGAGGCTTCCGGG  76 237
CX034_RS01105  215551 ..  215580 - -23.7  -2.78816   TCATGGCGCATGACA       GAGCGCCTGTCCC CGTG GGGACAGGCGCTC        TTGCCGCTGGTGTCG 100 111
CX034_RS01100 NONE
CX034_RS01095  212803 ..  212816 -  -3.7  -3.33696   GGGCTCCGTAAGGAA               GGCGC GGCG GCGTC                AGTGGGTCAGGTAAC  47 24
CX034_RS01090  211989 ..  212022 - -12.4  -2.82519   CGAGCACATCAACCA    GGCGCTGCGGCGCCGC TGAG GCGGCGC-GC-GCGCG     ATGCGCGAGCAGGCG  66 61
CX034_RS01080 NONE
CX034_RS01075  209664 ..  209684 - -19.7  -4.11216   CTTCGATCGGTAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGGCGTTCAG 100 37
        catC NONE
CX034_RS01065 NONE
        pcaD NONE
CX034_RS01055  206874 ..  206886 -  -4.7  -3.73068   GGCCGAATGCAACAA                GTCGG CAA CCGGC                AAGACCGGCGACGAG  58 310
CX034_RS01025  201802 ..  201812 -  -8.2  -3.28712   GGCGCGGGTGGACAA                 CGCC TAT GGCG                 ACCGCAACCTGGTGT  59 217
CX034_RS00975 NONE
CX034_RS00970 NONE
CX034_RS00965  188274 ..  188286 -  -4.8  -3.41051   GCAGTTCGACGAGAA                GTCG TTCGT CGAC                TTCAAGGGCGATGTC  52 372
CX034_RS00940  180909 ..  180938 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGT GCCACGGCGGCGCT       GCAGGGGCCGGCGGG  91 50
CX034_RS00935  178600 ..  178626 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GTG GCGGGCCGGCGG         CGGCGCGCTCAGCGC 100 34
         bfr  173560 ..  173581 - -17.3  -3.75629   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG  91 63
CX034_RS00875 NONE
CX034_RS00870  166928 ..  166983 -  -6.7  -3.15544   CGCTATCCGCACGAA TTCTCCGGCGGCCAGCGCCAGCGC-AT CTGC ATCGCGCGCGCGCTGGCCACCCG-GCC GCGCTTCCTGATCTG  52 330
CX034_RS00860  164535 ..  164592 -  -2.7  -4.11484   CTGAACTCTTCAAAA CCATGGAAGCGGTGCGCTGGAATAT-GG CGT CCGATATCCCATGGGACGACTTCGACGG CAGCAAGCTGTCGGA  59 327
        phoB NONE
        phoR NONE
CX034_RS00820 NONE
CX034_RS00815  155623 ..  155650 -  -2.7  -2.66316   CGGCCGACGATAGCA       GGGCG--GGACTG ACCT CAGTCTGTCGCCC        GGATTACGCGTTTGT  39 12
CX034_RS00810  154987 ..  154999 -  -7.7  -3.78934   TTGCCTGTACAACAA                GGGTT GAA AACCC                CCCCCCCATTGTGGA  66 96
CX034_RS00805  153495 ..  153510 -  -3.2  -3.73775   TCGAGCTCGACGAAA              TCGACG CCAT CGCCAA               CCTGGTGCGCCACGG  55 281
CX034_RS00795 NONE
        pxpB NONE
CX034_RS00785  150085 ..  150107 -    -9  -3.01712   TCCGGTCGGCGAAGA           CTTCCTGCGC CGC GCGCAGGCCG           ATGGCGCGGGCAGCG  57 495
CX034_RS00770  147840 ..  147852 -  -5.5  -3.01712   GCGGCGCCGCCAATA                CCGCA TCC TGCGA                TGATGACTCGCATAG  47 111
CX034_RS00760 NONE
CX034_RS00755 NONE
CX034_RS00750  143526 ..  143567 -  -9.2  -3.72027   AGCGCCTACGAACAA TGGGCGGGCGACGC-CGGC GACGA GCCGGGCGACGACCGCCTG CGCGTCGCGTAGGCC  68 125
        ilvA  136162 ..  136172 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 380
CX034_RS00720 NONE
CX034_RS00710  132734 ..  132774 -  -8.8  -3.05715   AATGCCGTTACCGAA CGCCAAGTCCGCGCCTGCG TGGA CGCGGGCGCGG-CTACGCT  GGGCGATCTCCAGTT  55 264
CX034_RS00695  130456 ..  130475 - -16.4  -3.85165   CAGCGCAAATGTAAA            CGGCGCGC CAGG GCGCGCCG             TCAGGCCGGTCCGGG  91 55
        leuA  128020 ..  128048 - -16.7   -3.1372   GACCGCCGAGCAATA        CCTGGCCCACCTG GCG CAGGCGGGGCAGG        CGCGCGCGAAAGTGG  80 355
CX034_RS00675 NONE
CX034_RS00670  124695 ..  124739 - -17.8  -3.19653   CCAGAAGGCCAGGAA CAGCGCCGCGGCCGGC-GCAG CGAA CAACAGCCATCCGCGGCGCTG CATATCAATTCACCT  86 30
CX034_RS00660 NONE
CX034_RS00655  122127 ..  122137 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 60
CX034_RS00650  121049 ..  121077 -  -2.9  -3.30701   TTCCAGGAAATTCAA        TGGGCCGCCAGCA CCA CGCTGACGGACTG        GCCGGTCTGATAGGT  46 71
CX034_RS00645  120173 ..  120194 - -10.8  -2.84325   GCGGTGCAAACATGA           CGCCGCCA TGTCAG CGGCGGCG            CTTGTTTCACTCGTC  61 32
CX034_RS00640  119063 ..  119077 - -12.8  -3.48276   CGGTGGTTCACAGAA               CCGCCG CGT CGGCGG               CGAAGAAATGCTGTC  73 3
CX034_RS00635 NONE
CX034_RS00630 NONE
CX034_RS00625  115862 ..  115880 - -17.4   -5.1971   AGGAAAAAGCAAAAA             GGCCGCGC TGG GCGCGGCC             ATGAGAAAACAGGTG 100 182
CX034_RS00605 NONE
CX034_RS00600  111212 ..  111226 -    -7  -2.90714   TTAAAGCGTTACAGA               CTGCGG ATG CCGCGG               GGAAGTTCCATGGCG  50 43
CX034_RS00595  110499 ..  110518 - -11.4  -4.08144   CCCATCAACGACAAA            GCCTCCGC ATGG ACGGAGGC             TTTGTGGCGTCGGGG  82 60
CX034_RS00580 NONE
        rfbB NONE
        rfbD NONE
        rfbC  104821 ..  104856 - -16.1  -3.14878   GGCGTCAACTGAAGA    CGCGCGGGCCGCTAC GCATAG GTATCGGCCCGCGCC     AGCGCCACGCCCTGG  81 1
CX034_RS00510 NONE
CX034_RS00505 NONE
CX034_RS00500   94077 ..   94110 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATT GCGGCGGGGGCGGCG      CTGCGTGCGCCCGAC  52 204
CX034_RS00485 NONE
CX034_RS00480 NONE
CX034_RS00475 NONE
CX034_RS00470 NONE
CX034_RS00465   86735 ..   86750 -  -7.5  -2.62515   AATTCTCGCAGATTA              GCGCG AGGCTG CGCGC               CGTGGCGTGACAGAT  50 7
CX034_RS00460 NONE
CX034_RS00455   84787 ..   84810 -  -9.4  -3.53012   GCGTTGGTGCGCAAA          GGCGCGACAC TGCC GGGGCGCGCC           ATTGAGTGCGAGTCA  64 107
CX034_RS00450 NONE
CX034_RS00445   82754 ..   82775 -  -7.9  -4.62302   GAAGAGCCGGAAAAA           CCCAGTGCG ACGG CGCACAAGG            CCAGTGGCGTGGATA  81 73
CX034_RS00435   79481 ..   79495 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 131
CX034_RS00425   77326 ..   77352 -  -8.7  -4.07568   CTCGCTGCTGGAAAA         GCTGCCCGC GCAGCTCCA GCAGGCAGC         CGGCCAGCTGCAGGG  72 308
CX034_RS00415 NONE
CX034_RS00410 NONE
        ampD NONE
CX034_RS00400   73382 ..   73413 - -10.1  -3.25823   GGTGCTGGAGATCAA      CCCGGACCACGCGC TGGTC GCGCG-GATCCGCG      ATGCCAGCGATGCGG  63 318
CX034_RS00390   71199 ..   71221 - -12.6  -2.82742   ACGCTTTTATAACGA           CCGGCGCCCG CAT CAGGCGCTGG           GCATGAAGACTCCGG  66 195
CX034_RS00365   66991 ..   67001 -  -8.2  -2.54655   AAAAGGCCCAACCCA                 GGGG TAC CCCC                 AAATTGATGATCCAT  52 507
CX034_RS00355 NONE
CX034_RS00350   64500 ..   64513 -  -5.3   -3.5323   AACTTCAAACAAAAC               TATCG CACT CGATA                TCAAGCGCATCGATC  54 1
CX034_RS00345 NONE
CX034_RS00340   63284 ..   63310 -  -4.3  -2.78384   GCGCGGCCCATGATA        TCCGTGCCC-CC ACCG GGTGGGAACGGT         ACGACCAGTGTAATA  43 189
CX034_RS00335   62061 ..   62083 -  -8.4  -4.09685   GGTGATGGCGTAAAA           GGGCATAGCG ATC CGCTATATCC           AGCCTGGCAAGCCAA  72 385
CX034_RS00325   60987 ..   60998 -    -3  -5.30348   ACTTAACAATAAAAA                TTCA AATA TGAA                 TGTTTAATTTAGTTA  89 105
CX034_RS00320 NONE
CX034_RS00315   58900 ..   58930 -  -5.3  -3.73068   GGTCGAAGCCAACAA       CCCCACCACCAGC ATCCA GCTGGTCGTGGCC       GGCATAGGGCTGGGT  57 344
CX034_RS00305 NONE
CX034_RS00300 NONE
CX034_RS00295 NONE
CX034_RS00290 NONE
CX034_RS00285 NONE
CX034_RS00280   53379 ..   53401 -  -4.8  -3.76482   CGACACCAGCAAGAA           CCTGGTCG AGGAAGG CGACAAGG           GCAAGCGCTACGCGC  58 247
CX034_RS00235   45237 ..   45272 -  -2.4  -4.16842   TTCATGCTCAAGAAA    CGCGTGCGGATCCTG TGGCAGG CCGGCTGCGC-CGCG    CTGCTGCTGGCCGCC  61 474
CX034_RS00215   43266 ..   43306 - -20.6  -3.53012   GTCTTGGCCGTCAAA CCG-CAGTGTGCCTGTCCC AGCG GGGACAGGCACACTGGCCG  CAGTTGGGACAGGCA 100 66
CX034_RS00175   35576 ..   35594 - -13.1  -2.84298   GACAGTTCACAACTA             GCGCGGC GCCTG GCCGCGC             GGCAGCCAGTGCCAG  69 4
CX034_RS00155   30988 ..   31001 -  -3.7  -2.70932   TCTCGCCGCGAATCA               TCGCC TGGC GGCGG                ATCCGGCCAGCATGG  41 94
CX034_RS00150 NONE
CX034_RS00145 NONE
CX034_RS00140 NONE
CX034_RS00135   28287 ..   28297 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  58 43
CX034_RS00130   26859 ..   26875 -  -5.8  -3.53012   TGCGCTGCCTGCAAA             GC-GGCG CGGA CGCCTGC              GTGCCCCTGCCGGCC  55 433
CX034_RS00115   24044 ..   24068 -  -7.7  -2.97021   TCGGCAAAGATGATA          TCCAGGCCCAC TGC GCGGGCCTCGC          CCAGCTTGTCCAGCA  53 310
CX034_RS00100   20076 ..   20099 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCGG 100 53
