XA09_RS00210	PWY-5386	methylglyoxal degradation I
XA09_RS00255	PWY-5344	L-homocysteine biosynthesis
XA09_RS00285	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XA09_RS00285	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XA09_RS00475	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
XA09_RS00500	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
XA09_RS00510	PWY-3961	phosphopantothenate biosynthesis II
XA09_RS00545	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XA09_RS00545	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XA09_RS00560	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XA09_RS00560	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
XA09_RS00565	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XA09_RS00565	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
XA09_RS00580	PWY-3221	dTDP-L-rhamnose biosynthesis II
XA09_RS00580	PWY-6808	dTDP-D-forosamine biosynthesis
XA09_RS00580	PWY-6942	dTDP-D-desosamine biosynthesis
XA09_RS00580	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
XA09_RS00580	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
XA09_RS00580	PWY-6974	dTDP-L-olivose biosynthesis
XA09_RS00580	PWY-6976	dTDP-L-mycarose biosynthesis
XA09_RS00580	PWY-7104	dTDP-L-megosamine biosynthesis
XA09_RS00580	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
XA09_RS00580	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
XA09_RS00580	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
XA09_RS00580	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
XA09_RS00580	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
XA09_RS00580	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
XA09_RS00580	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
XA09_RS00580	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
XA09_RS00580	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
XA09_RS00580	PWY-7688	XA09_RS00580
XA09_RS00595	PWY-6936	seleno-amino acid biosynthesis
XA09_RS00690	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS00695	PWY-6871	3-methylbutanol biosynthesis
XA09_RS00840	PWY-5839	menaquinol-7 biosynthesis
XA09_RS00840	PWY-5844	menaquinol-9 biosynthesis
XA09_RS00840	PWY-5849	menaquinol-6 biosynthesis
XA09_RS00840	PWY-5890	menaquinol-10 biosynthesis
XA09_RS00840	PWY-5891	menaquinol-11 biosynthesis
XA09_RS00840	PWY-5892	menaquinol-12 biosynthesis
XA09_RS00840	PWY-5895	menaquinol-13 biosynthesis
XA09_RS00960	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS01000	PWY-6854	ethylene biosynthesis III (microbes)
XA09_RS01055	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XA09_RS01055	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XA09_RS01055	PWY-7717	XA09_RS01055
XA09_RS01055	PWY-7733	XA09_RS01055
XA09_RS01055	PWY-7734	XA09_RS01055
XA09_RS01060	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
XA09_RS01070	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
XA09_RS01100	PWY-1361	benzoyl-CoA degradation I (aerobic)
XA09_RS01100	PWY-5109	2-methylbutanoate biosynthesis
XA09_RS01100	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XA09_RS01100	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XA09_RS01100	PWY-5177	glutaryl-CoA degradation
XA09_RS01100	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS01100	PWY-6435	4-hydroxybenzoate biosynthesis V
XA09_RS01100	PWY-6583	pyruvate fermentation to butanol I
XA09_RS01100	PWY-6863	pyruvate fermentation to hexanol
XA09_RS01100	PWY-6883	pyruvate fermentation to butanol II
XA09_RS01100	PWY-6944	androstenedione degradation
XA09_RS01100	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XA09_RS01100	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XA09_RS01100	PWY-7007	methyl ketone biosynthesis
XA09_RS01100	PWY-7046	4-coumarate degradation (anaerobic)
XA09_RS01100	PWY-7094	fatty acid salvage
XA09_RS01100	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XA09_RS01100	PWY-735	jasmonic acid biosynthesis
XA09_RS01100	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XA09_RS01100	PWY-7606	docosahexaenoate biosynthesis III (mammals)
XA09_RS01100	PWY-7726	XA09_RS01100
XA09_RS01110	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS01110	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XA09_RS01110	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS01110	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS01110	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
XA09_RS01110	PWY-6549	L-glutamine biosynthesis III
XA09_RS01110	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XA09_RS01110	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XA09_RS01110	PWY-7124	ethylene biosynthesis V (engineered)
XA09_RS01115	PWY-6703	preQ<sub>0</sub> biosynthesis
XA09_RS01155	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
XA09_RS01235	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XA09_RS01235	PWY-6148	tetrahydromethanopterin biosynthesis
XA09_RS01235	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XA09_RS01235	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XA09_RS01255	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XA09_RS01255	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XA09_RS01255	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XA09_RS01260	PWY-2781	<i>cis</i>-zeatin biosynthesis
XA09_RS01285	PWY-5392	reductive TCA cycle II
XA09_RS01285	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XA09_RS01285	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS01285	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS01285	PWY-6728	methylaspartate cycle
XA09_RS01285	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS01285	PWY-7254	TCA cycle VII (acetate-producers)
XA09_RS01285	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS01305	PWY-4041	&gamma;-glutamyl cycle
XA09_RS01305	PWY-5826	hypoglycin biosynthesis
XA09_RS01350	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
XA09_RS01365	PWY-6605	adenine and adenosine salvage II
XA09_RS01365	PWY-6610	adenine and adenosine salvage IV
XA09_RS01430	PWY-3781	aerobic respiration I (cytochrome c)
XA09_RS01430	PWY-6692	Fe(II) oxidation
XA09_RS01430	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
XA09_RS01430	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XA09_RS01480	PWY-6871	3-methylbutanol biosynthesis
XA09_RS01490	PWY-5101	L-isoleucine biosynthesis II
XA09_RS01490	PWY-5103	L-isoleucine biosynthesis III
XA09_RS01490	PWY-5104	L-isoleucine biosynthesis IV
XA09_RS01490	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XA09_RS01610	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XA09_RS01615	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XA09_RS01615	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XA09_RS01615	PWY-6897	thiamin salvage II
XA09_RS01615	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XA09_RS01615	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
XA09_RS01615	PWY-7356	thiamin salvage IV (yeast)
XA09_RS01615	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XA09_RS01640	PWY-5686	UMP biosynthesis
XA09_RS01890	PWY-5686	UMP biosynthesis
XA09_RS01900	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS01955	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS01955	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XA09_RS01975	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
XA09_RS01985	PWY-2201	folate transformations I
XA09_RS02220	PWY-6454	vancomycin resistance I
XA09_RS02220	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS02240	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS02270	PWY-5392	reductive TCA cycle II
XA09_RS02270	PWY-5537	pyruvate fermentation to acetate V
XA09_RS02270	PWY-5538	pyruvate fermentation to acetate VI
XA09_RS02270	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS02270	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS02270	PWY-6728	methylaspartate cycle
XA09_RS02270	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS02270	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS02295	PWY-6749	CMP-legionaminate biosynthesis I
XA09_RS02310	PWY-1361	benzoyl-CoA degradation I (aerobic)
XA09_RS02310	PWY-5109	2-methylbutanoate biosynthesis
XA09_RS02310	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XA09_RS02310	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XA09_RS02310	PWY-5177	glutaryl-CoA degradation
XA09_RS02310	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS02310	PWY-6435	4-hydroxybenzoate biosynthesis V
XA09_RS02310	PWY-6583	pyruvate fermentation to butanol I
XA09_RS02310	PWY-6863	pyruvate fermentation to hexanol
XA09_RS02310	PWY-6883	pyruvate fermentation to butanol II
XA09_RS02310	PWY-6944	androstenedione degradation
XA09_RS02310	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XA09_RS02310	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XA09_RS02310	PWY-7007	methyl ketone biosynthesis
XA09_RS02310	PWY-7046	4-coumarate degradation (anaerobic)
XA09_RS02310	PWY-7094	fatty acid salvage
XA09_RS02310	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XA09_RS02310	PWY-735	jasmonic acid biosynthesis
XA09_RS02310	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XA09_RS02310	PWY-7606	docosahexaenoate biosynthesis III (mammals)
XA09_RS02310	PWY-7726	XA09_RS02310
XA09_RS02325	PWY-5392	reductive TCA cycle II
XA09_RS02325	PWY-5537	pyruvate fermentation to acetate V
XA09_RS02325	PWY-5538	pyruvate fermentation to acetate VI
XA09_RS02325	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS02325	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS02325	PWY-6728	methylaspartate cycle
XA09_RS02325	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS02325	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS02360	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XA09_RS02470	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XA09_RS02470	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XA09_RS02495	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
XA09_RS02495	PWY-7494	choline degradation IV
XA09_RS02555	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS02560	PWY-5331	taurine biosynthesis
XA09_RS02615	PWY-1361	benzoyl-CoA degradation I (aerobic)
XA09_RS02615	PWY-5109	2-methylbutanoate biosynthesis
XA09_RS02615	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XA09_RS02615	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XA09_RS02615	PWY-5177	glutaryl-CoA degradation
XA09_RS02615	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS02615	PWY-6435	4-hydroxybenzoate biosynthesis V
XA09_RS02615	PWY-6583	pyruvate fermentation to butanol I
XA09_RS02615	PWY-6863	pyruvate fermentation to hexanol
XA09_RS02615	PWY-6883	pyruvate fermentation to butanol II
XA09_RS02615	PWY-6944	androstenedione degradation
XA09_RS02615	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XA09_RS02615	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XA09_RS02615	PWY-7007	methyl ketone biosynthesis
XA09_RS02615	PWY-7046	4-coumarate degradation (anaerobic)
XA09_RS02615	PWY-7094	fatty acid salvage
XA09_RS02615	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XA09_RS02615	PWY-735	jasmonic acid biosynthesis
XA09_RS02615	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XA09_RS02615	PWY-7606	docosahexaenoate biosynthesis III (mammals)
XA09_RS02615	PWY-7726	XA09_RS02615
XA09_RS02635	PWY-723	alkylnitronates degradation
XA09_RS02710	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
XA09_RS02710	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
XA09_RS02725	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS02735	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS02795	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XA09_RS02795	PWY-6148	tetrahydromethanopterin biosynthesis
XA09_RS02795	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XA09_RS02795	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XA09_RS02835	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XA09_RS02835	PWY-5723	Rubisco shunt
XA09_RS02840	PWY-181	photorespiration
XA09_RS02845	PWY-5958	acridone alkaloid biosynthesis
XA09_RS02845	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XA09_RS02845	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XA09_RS02850	PWY-5958	acridone alkaloid biosynthesis
XA09_RS02850	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XA09_RS02850	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XA09_RS02890	PWY-2201	folate transformations I
XA09_RS02890	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS02905	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XA09_RS02905	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XA09_RS02955	PWY-5958	acridone alkaloid biosynthesis
XA09_RS02955	PWY-6543	4-aminobenzoate biosynthesis
XA09_RS02955	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XA09_RS02955	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XA09_RS03035	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XA09_RS03090	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XA09_RS03090	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XA09_RS03090	PWY-5989	stearate biosynthesis II (bacteria and plants)
XA09_RS03090	PWY-6113	superpathway of mycolate biosynthesis
XA09_RS03090	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XA09_RS03090	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XA09_RS03090	PWY-7663	gondoate biosynthesis (anaerobic)
XA09_RS03090	PWY-7664	oleate biosynthesis IV (anaerobic)
XA09_RS03090	PWYG-321	mycolate biosynthesis
XA09_RS03100	PWY-5386	methylglyoxal degradation I
XA09_RS03270	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS03270	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS03270	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XA09_RS03270	PWY-5087	L-glutamate degradation VI (to pyruvate)
XA09_RS03270	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS03270	PWY-5723	Rubisco shunt
XA09_RS03270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS03270	PWY-6728	methylaspartate cycle
XA09_RS03270	PWY-6886	1-butanol autotrophic biosynthesis
XA09_RS03270	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS03270	PWY-7003	glycerol degradation to butanol
XA09_RS03270	PWY-7124	ethylene biosynthesis V (engineered)
XA09_RS03270	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XA09_RS03285	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XA09_RS03305	PWY-5704	urea degradation II
XA09_RS03315	PWY-5704	urea degradation II
XA09_RS03320	PWY-5704	urea degradation II
XA09_RS03385	PWY-3841	folate transformations II
XA09_RS03385	PWY-6614	tetrahydrofolate biosynthesis
XA09_RS03390	PWY-3841	folate transformations II
XA09_RS03390	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS03390	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS03390	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XA09_RS03390	PWY-7199	pyrimidine deoxyribonucleosides salvage
XA09_RS03390	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XA09_RS03405	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XA09_RS03405	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XA09_RS03405	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XA09_RS03450	PWY-3801	sucrose degradation II (sucrose synthase)
XA09_RS03450	PWY-5054	sorbitol biosynthesis I
XA09_RS03450	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
XA09_RS03450	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XA09_RS03450	PWY-5659	GDP-mannose biosynthesis
XA09_RS03450	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS03450	PWY-621	sucrose degradation III (sucrose invertase)
XA09_RS03450	PWY-622	starch biosynthesis
XA09_RS03450	PWY-6981	chitin biosynthesis
XA09_RS03450	PWY-6992	1,5-anhydrofructose degradation
XA09_RS03450	PWY-7238	sucrose biosynthesis II
XA09_RS03450	PWY-7347	sucrose biosynthesis III
XA09_RS03450	PWY-7385	1,3-propanediol biosynthesis (engineered)
XA09_RS03455	PWY-6749	CMP-legionaminate biosynthesis I
XA09_RS03530	PWY-7560	methylerythritol phosphate pathway II
XA09_RS03550	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
XA09_RS03705	PWY-5692	allantoin degradation to glyoxylate II
XA09_RS03705	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
XA09_RS03710	PWY-4041	&gamma;-glutamyl cycle
XA09_RS03710	PWY-5826	hypoglycin biosynthesis
XA09_RS03850	PWY-2201	folate transformations I
XA09_RS03850	PWY-3841	folate transformations II
XA09_RS03860	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XA09_RS03875	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XA09_RS03875	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
XA09_RS03890	PWY-2941	L-lysine biosynthesis II
XA09_RS03890	PWY-5097	L-lysine biosynthesis VI
XA09_RS03970	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XA09_RS03970	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XA09_RS03970	PWY-6268	adenosylcobalamin salvage from cobalamin
XA09_RS03970	PWY-6269	adenosylcobalamin salvage from cobinamide II
XA09_RS03995	PWY-4041	&gamma;-glutamyl cycle
XA09_RS03995	PWY-5826	hypoglycin biosynthesis
XA09_RS04045	PWY-5101	L-isoleucine biosynthesis II
XA09_RS04045	PWY-5103	L-isoleucine biosynthesis III
XA09_RS04045	PWY-5104	L-isoleucine biosynthesis IV
XA09_RS04045	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XA09_RS04110	PWY-5686	UMP biosynthesis
XA09_RS04130	PWY-2201	folate transformations I
XA09_RS04145	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XA09_RS04145	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XA09_RS04150	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XA09_RS04150	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XA09_RS04150	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XA09_RS04155	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XA09_RS04155	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XA09_RS04165	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XA09_RS04165	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XA09_RS04165	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XA09_RS04165	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XA09_RS04170	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XA09_RS04170	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XA09_RS04175	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XA09_RS04175	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XA09_RS04195	PWY-2201	folate transformations I
XA09_RS04195	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS04225	PWY-5331	taurine biosynthesis
XA09_RS04260	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XA09_RS04290	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XA09_RS04290	PWY-6416	quinate degradation II
XA09_RS04290	PWY-6707	gallate biosynthesis
XA09_RS04360	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XA09_RS04360	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS04360	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XA09_RS04360	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XA09_RS04360	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS04360	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS04360	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS04360	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XA09_RS04365	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XA09_RS04365	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS04365	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XA09_RS04365	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XA09_RS04365	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS04365	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS04365	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS04365	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XA09_RS04395	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XA09_RS04400	PWY-5392	reductive TCA cycle II
XA09_RS04400	PWY-5537	pyruvate fermentation to acetate V
XA09_RS04400	PWY-5538	pyruvate fermentation to acetate VI
XA09_RS04400	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS04400	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS04400	PWY-6728	methylaspartate cycle
XA09_RS04400	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS04400	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS04485	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS04485	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XA09_RS04525	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS04525	PWY-181	photorespiration
XA09_RS04525	PWY-2161	folate polyglutamylation
XA09_RS04525	PWY-2201	folate transformations I
XA09_RS04525	PWY-3661	glycine betaine degradation I
XA09_RS04525	PWY-3661-1	glycine betaine degradation II (mammalian)
XA09_RS04525	PWY-3841	folate transformations II
XA09_RS04525	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS04545	PWY-5525	D-glucuronate degradation I
XA09_RS04625	PWY-3781	aerobic respiration I (cytochrome c)
XA09_RS04625	PWY-4521	arsenite oxidation I (respiratory)
XA09_RS04625	PWY-6692	Fe(II) oxidation
XA09_RS04625	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XA09_RS04625	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
XA09_RS04745	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XA09_RS04745	PWY-6164	3-dehydroquinate biosynthesis I
XA09_RS04745	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XA09_RS04840	PWY-6123	inosine-5'-phosphate biosynthesis I
XA09_RS04840	PWY-6124	inosine-5'-phosphate biosynthesis II
XA09_RS04840	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS04840	PWY-7234	inosine-5'-phosphate biosynthesis III
XA09_RS04885	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS05020	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS05025	PWY-6167	flavin biosynthesis II (archaea)
XA09_RS05025	PWY-6168	flavin biosynthesis III (fungi)
XA09_RS05025	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS05040	PWY-5331	taurine biosynthesis
XA09_RS05085	PWY-5692	allantoin degradation to glyoxylate II
XA09_RS05085	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
XA09_RS05105	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS05105	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
XA09_RS05105	PWY-6638	sulfolactate degradation III
XA09_RS05105	PWY-6642	(<i>R</i>)-cysteate degradation
XA09_RS05105	PWY-6643	coenzyme M biosynthesis II
XA09_RS05105	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XA09_RS05105	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XA09_RS05105	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS05145	PWY-6654	phosphopantothenate biosynthesis III
XA09_RS05370	PWY-2301	<i>myo</i>-inositol biosynthesis
XA09_RS05370	PWY-4702	phytate degradation I
XA09_RS05370	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
XA09_RS05450	PWY-6891	thiazole biosynthesis II (Bacillus)
XA09_RS05450	PWY-6892	thiazole biosynthesis I (E. coli)
XA09_RS05450	PWY-7560	methylerythritol phosphate pathway II
XA09_RS05455	PWY-5663	tetrahydrobiopterin biosynthesis I
XA09_RS05455	PWY-5664	tetrahydrobiopterin biosynthesis II
XA09_RS05455	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XA09_RS05455	PWY-6703	preQ<sub>0</sub> biosynthesis
XA09_RS05455	PWY-6983	tetrahydrobiopterin biosynthesis III
XA09_RS05455	PWY-7442	drosopterin and aurodrosopterin biosynthesis
XA09_RS05495	PWY-7294	xylose degradation IV
XA09_RS05495	PWY-7295	L-arabinose degradation IV
XA09_RS05590	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS05595	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XA09_RS05630	PWY-6854	ethylene biosynthesis III (microbes)
XA09_RS05640	PWY-1361	benzoyl-CoA degradation I (aerobic)
XA09_RS05640	PWY-2361	3-oxoadipate degradation
XA09_RS05640	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
XA09_RS05690	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
XA09_RS05690	PWY-6853	ethylene biosynthesis II (microbes)
XA09_RS05690	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XA09_RS05780	PWY-3781	aerobic respiration I (cytochrome c)
XA09_RS05780	PWY-4521	arsenite oxidation I (respiratory)
XA09_RS05780	PWY-6692	Fe(II) oxidation
XA09_RS05780	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XA09_RS05780	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
XA09_RS05845	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
XA09_RS05890	PWY-6823	molybdenum cofactor biosynthesis
XA09_RS05900	PWY-6823	molybdenum cofactor biosynthesis
XA09_RS05905	PWY-6823	molybdenum cofactor biosynthesis
XA09_RS05925	PWY-4983	L-citrulline-nitric oxide cycle
XA09_RS05925	PWY-4984	urea cycle
XA09_RS05925	PWY-5	canavanine biosynthesis
XA09_RS05925	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS05925	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XA09_RS05935	PWY-5381	pyridine nucleotide cycling (plants)
XA09_RS05935	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XA09_RS05970	PWY-4041	&gamma;-glutamyl cycle
XA09_RS05970	PWY-5826	hypoglycin biosynthesis
XA09_RS06005	PWY-6938	NADH repair
XA09_RS06015	PWY-5176	coumarin biosynthesis (via 2-coumarate)
XA09_RS06060	PWY-1341	phenylacetate degradation II (anaerobic)
XA09_RS06060	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
XA09_RS06060	PWY-7716	XA09_RS06060
XA09_RS06100	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XA09_RS06100	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XA09_RS06100	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XA09_RS06145	PWY-6703	preQ<sub>0</sub> biosynthesis
XA09_RS06220	PWY-4261	glycerol degradation I
XA09_RS06220	PWY-6118	glycerol-3-phosphate shuttle
XA09_RS06220	PWY-6952	glycerophosphodiester degradation
XA09_RS06330	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XA09_RS06330	PWY-6596	adenosine nucleotides degradation I
XA09_RS06330	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS06335	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS06605	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XA09_RS06605	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS06605	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS06605	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
XA09_RS06710	PWY-5686	UMP biosynthesis
XA09_RS06805	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XA09_RS06805	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
XA09_RS06805	PWY-6936	seleno-amino acid biosynthesis
XA09_RS06805	PWY-702	L-methionine biosynthesis II
XA09_RS06815	PWY-5392	reductive TCA cycle II
XA09_RS06815	PWY-5537	pyruvate fermentation to acetate V
XA09_RS06815	PWY-5538	pyruvate fermentation to acetate VI
XA09_RS06815	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS06815	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS06815	PWY-6728	methylaspartate cycle
XA09_RS06815	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS06815	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS06820	PWY-5392	reductive TCA cycle II
XA09_RS06820	PWY-5537	pyruvate fermentation to acetate V
XA09_RS06820	PWY-5538	pyruvate fermentation to acetate VI
XA09_RS06820	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS06820	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS06820	PWY-6728	methylaspartate cycle
XA09_RS06820	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS06820	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS06835	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XA09_RS06835	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XA09_RS06840	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XA09_RS06840	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XA09_RS06925	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
XA09_RS06925	PWY-2201	folate transformations I
XA09_RS06925	PWY-3841	folate transformations II
XA09_RS06925	PWY-5030	L-histidine degradation III
XA09_RS06925	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS06925	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XA09_RS06940	PWY-7533	gliotoxin biosynthesis
XA09_RS06950	PWY-3661	glycine betaine degradation I
XA09_RS06950	PWY-4722	creatinine degradation II
XA09_RS06955	PWY-3661	glycine betaine degradation I
XA09_RS06955	PWY-4722	creatinine degradation II
XA09_RS06960	PWY-3661	glycine betaine degradation I
XA09_RS06960	PWY-4722	creatinine degradation II
XA09_RS06965	PWY-3661	glycine betaine degradation I
XA09_RS06965	PWY-4722	creatinine degradation II
XA09_RS06970	PWY-2201	folate transformations I
XA09_RS06970	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS06995	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XA09_RS06995	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XA09_RS07000	PWY-2941	L-lysine biosynthesis II
XA09_RS07000	PWY-2942	L-lysine biosynthesis III
XA09_RS07000	PWY-5097	L-lysine biosynthesis VI
XA09_RS07020	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
XA09_RS07020	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XA09_RS07020	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
XA09_RS07105	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS07105	PWY-6549	L-glutamine biosynthesis III
XA09_RS07105	PWY-6728	methylaspartate cycle
XA09_RS07105	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS07105	PWY-7124	ethylene biosynthesis V (engineered)
XA09_RS07105	PWY-7254	TCA cycle VII (acetate-producers)
XA09_RS07105	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XA09_RS07205	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
XA09_RS07425	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XA09_RS07430	PWY-1881	formate oxidation to CO<sub>2</sub>
XA09_RS07430	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS07430	PWY-6696	oxalate degradation III
XA09_RS07460	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS07460	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XA09_RS07460	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS07460	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS07460	PWY-7385	1,3-propanediol biosynthesis (engineered)
XA09_RS07465	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XA09_RS07470	PWY-6123	inosine-5'-phosphate biosynthesis I
XA09_RS07470	PWY-6124	inosine-5'-phosphate biosynthesis II
XA09_RS07470	PWY-7234	inosine-5'-phosphate biosynthesis III
XA09_RS07495	PWY-6123	inosine-5'-phosphate biosynthesis I
XA09_RS07495	PWY-7234	inosine-5'-phosphate biosynthesis III
XA09_RS07730	PWY-2941	L-lysine biosynthesis II
XA09_RS07730	PWY-2942	L-lysine biosynthesis III
XA09_RS07730	PWY-5097	L-lysine biosynthesis VI
XA09_RS07775	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS07800	PWY-6617	adenosine nucleotides degradation III
XA09_RS07850	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
XA09_RS07865	PWY-381	nitrate reduction II (assimilatory)
XA09_RS07865	PWY-5675	nitrate reduction V (assimilatory)
XA09_RS07865	PWY-6549	L-glutamine biosynthesis III
XA09_RS07865	PWY-6963	ammonia assimilation cycle I
XA09_RS07865	PWY-6964	ammonia assimilation cycle II
XA09_RS07960	PWY-5642	2,4-dinitrotoluene degradation
XA09_RS07960	PWY-6373	acrylate degradation
XA09_RS08475	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XA09_RS08475	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS08475	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS08475	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
XA09_RS08475	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XA09_RS08475	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XA09_RS08595	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS08725	PWY-6004	glycine betaine biosynthesis V (from glycine)
XA09_RS08730	PWY-2301	<i>myo</i>-inositol biosynthesis
XA09_RS08730	PWY-4702	phytate degradation I
XA09_RS08730	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
XA09_RS08740	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
XA09_RS08770	PWY-4381	fatty acid biosynthesis initiation I
XA09_RS08770	PWY-5743	3-hydroxypropanoate cycle
XA09_RS08770	PWY-5744	glyoxylate assimilation
XA09_RS08770	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS08770	PWY-6679	jadomycin biosynthesis
XA09_RS08770	PWY-6722	candicidin biosynthesis
XA09_RS08770	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XA09_RS08785	PWY-2941	L-lysine biosynthesis II
XA09_RS08785	PWY-2942	L-lysine biosynthesis III
XA09_RS08785	PWY-5097	L-lysine biosynthesis VI
XA09_RS08785	PWY-6559	spermidine biosynthesis II
XA09_RS08785	PWY-6562	norspermidine biosynthesis
XA09_RS08785	PWY-7153	grixazone biosynthesis
XA09_RS08810	PWY-1361	benzoyl-CoA degradation I (aerobic)
XA09_RS08810	PWY-5109	2-methylbutanoate biosynthesis
XA09_RS08810	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XA09_RS08810	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XA09_RS08810	PWY-5177	glutaryl-CoA degradation
XA09_RS08810	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS08810	PWY-6435	4-hydroxybenzoate biosynthesis V
XA09_RS08810	PWY-6583	pyruvate fermentation to butanol I
XA09_RS08810	PWY-6863	pyruvate fermentation to hexanol
XA09_RS08810	PWY-6883	pyruvate fermentation to butanol II
XA09_RS08810	PWY-6944	androstenedione degradation
XA09_RS08810	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XA09_RS08810	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XA09_RS08810	PWY-7007	methyl ketone biosynthesis
XA09_RS08810	PWY-7046	4-coumarate degradation (anaerobic)
XA09_RS08810	PWY-7094	fatty acid salvage
XA09_RS08810	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XA09_RS08810	PWY-735	jasmonic acid biosynthesis
XA09_RS08810	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XA09_RS08810	PWY-7606	docosahexaenoate biosynthesis III (mammals)
XA09_RS08810	PWY-7726	XA09_RS08810
XA09_RS08900	PWY-5392	reductive TCA cycle II
XA09_RS08900	PWY-5537	pyruvate fermentation to acetate V
XA09_RS08900	PWY-5538	pyruvate fermentation to acetate VI
XA09_RS08900	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS08900	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS08900	PWY-6728	methylaspartate cycle
XA09_RS08900	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS08900	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS08985	PWY-6749	CMP-legionaminate biosynthesis I
XA09_RS08990	PWY-3801	sucrose degradation II (sucrose synthase)
XA09_RS08990	PWY-5054	sorbitol biosynthesis I
XA09_RS08990	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
XA09_RS08990	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XA09_RS08990	PWY-5659	GDP-mannose biosynthesis
XA09_RS08990	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS08990	PWY-621	sucrose degradation III (sucrose invertase)
XA09_RS08990	PWY-622	starch biosynthesis
XA09_RS08990	PWY-6981	chitin biosynthesis
XA09_RS08990	PWY-6992	1,5-anhydrofructose degradation
XA09_RS08990	PWY-7238	sucrose biosynthesis II
XA09_RS08990	PWY-7347	sucrose biosynthesis III
XA09_RS08990	PWY-7385	1,3-propanediol biosynthesis (engineered)
XA09_RS09225	PWY-7425	2-chloroacrylate degradation I
XA09_RS09245	PWY-5747	2-methylcitrate cycle II
XA09_RS09355	PWY-1361	benzoyl-CoA degradation I (aerobic)
XA09_RS09355	PWY-5109	2-methylbutanoate biosynthesis
XA09_RS09355	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XA09_RS09355	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XA09_RS09355	PWY-5177	glutaryl-CoA degradation
XA09_RS09355	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS09355	PWY-6435	4-hydroxybenzoate biosynthesis V
XA09_RS09355	PWY-6583	pyruvate fermentation to butanol I
XA09_RS09355	PWY-6863	pyruvate fermentation to hexanol
XA09_RS09355	PWY-6883	pyruvate fermentation to butanol II
XA09_RS09355	PWY-6944	androstenedione degradation
XA09_RS09355	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XA09_RS09355	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XA09_RS09355	PWY-7007	methyl ketone biosynthesis
XA09_RS09355	PWY-7046	4-coumarate degradation (anaerobic)
XA09_RS09355	PWY-7094	fatty acid salvage
XA09_RS09355	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XA09_RS09355	PWY-735	jasmonic acid biosynthesis
XA09_RS09355	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XA09_RS09355	PWY-7606	docosahexaenoate biosynthesis III (mammals)
XA09_RS09355	PWY-7726	XA09_RS09355
XA09_RS09360	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS09370	PWY-3341	L-proline biosynthesis III
XA09_RS09370	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XA09_RS09505	PWY-6854	ethylene biosynthesis III (microbes)
XA09_RS09565	PWY-6012	acyl carrier protein metabolism I
XA09_RS09565	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
XA09_RS09570	PWY-6902	chitin degradation II
XA09_RS09580	PWY-5269	cardiolipin biosynthesis II
XA09_RS09580	PWY-5668	cardiolipin biosynthesis I
XA09_RS09595	PWY-6700	queuosine biosynthesis
XA09_RS09600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS09675	PWY-4381	fatty acid biosynthesis initiation I
XA09_RS09815	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XA09_RS09815	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XA09_RS09870	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XA09_RS10010	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
XA09_RS10020	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XA09_RS10020	PWY-6578	8-amino-7-oxononanoate biosynthesis III
XA09_RS10020	PWY-7147	8-amino-7-oxononanoate biosynthesis II
XA09_RS10165	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS10230	PWY-2201	folate transformations I
XA09_RS10235	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XA09_RS10235	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
XA09_RS10235	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS10235	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS10235	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
XA09_RS10235	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XA09_RS10235	PWY-7205	CMP phosphorylation
XA09_RS10235	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XA09_RS10235	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS10235	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS10235	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XA09_RS10235	PWY-7224	purine deoxyribonucleosides salvage
XA09_RS10235	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XA09_RS10235	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XA09_RS10280	PWY-6829	tRNA methylation (yeast)
XA09_RS10280	PWY-7285	methylwyosine biosynthesis
XA09_RS10280	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
XA09_RS10350	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS10410	PWY-5155	&beta;-alanine biosynthesis III
XA09_RS10425	PWY-7294	xylose degradation IV
XA09_RS10425	PWY-7295	L-arabinose degradation IV
XA09_RS10490	PWY-6823	molybdenum cofactor biosynthesis
XA09_RS10490	PWY-6891	thiazole biosynthesis II (Bacillus)
XA09_RS10490	PWY-6892	thiazole biosynthesis I (E. coli)
XA09_RS10490	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
XA09_RS10510	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS10510	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
XA09_RS10510	PWY-6638	sulfolactate degradation III
XA09_RS10510	PWY-6642	(<i>R</i>)-cysteate degradation
XA09_RS10510	PWY-6643	coenzyme M biosynthesis II
XA09_RS10510	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XA09_RS10510	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XA09_RS10510	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS10725	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XA09_RS10725	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XA09_RS10725	PWY-6825	phosphatidylcholine biosynthesis V
XA09_RS10730	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
XA09_RS10730	PWY-6167	flavin biosynthesis II (archaea)
XA09_RS10730	PWY-6168	flavin biosynthesis III (fungi)
XA09_RS10800	PWY-7052	cyanophycin metabolism
XA09_RS10805	PWY-7052	cyanophycin metabolism
XA09_RS10910	PWY-5381	pyridine nucleotide cycling (plants)
XA09_RS10910	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XA09_RS10910	PWY-6596	adenosine nucleotides degradation I
XA09_RS10910	PWY-6606	guanosine nucleotides degradation II
XA09_RS10910	PWY-6607	guanosine nucleotides degradation I
XA09_RS10910	PWY-6608	guanosine nucleotides degradation III
XA09_RS10910	PWY-7185	UTP and CTP dephosphorylation I
XA09_RS10925	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
XA09_RS10925	PWY-5368	dimorphecolate biosynthesis
XA09_RS10925	PWY-5995	linoleate biosynthesis I (plants)
XA09_RS10925	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
XA09_RS10925	PWY-6803	phosphatidylcholine acyl editing
XA09_RS10925	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
XA09_RS10925	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
XA09_RS10925	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
XA09_RS10925	PWY-7470	phosphatidylcholine biosynthesis VII
XA09_RS10925	PWY-7618	ricinoleate biosynthesis
XA09_RS11020	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS11105	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS11420	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XA09_RS11420	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XA09_RS11420	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XA09_RS11425	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
XA09_RS11425	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
XA09_RS11430	PWY-5381	pyridine nucleotide cycling (plants)
XA09_RS11430	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XA09_RS11440	PWY-6825	phosphatidylcholine biosynthesis V
XA09_RS11495	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
XA09_RS11580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS11600	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XA09_RS11600	PWY-5723	Rubisco shunt
XA09_RS11650	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
XA09_RS11650	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
XA09_RS11705	PWY-3781	aerobic respiration I (cytochrome c)
XA09_RS11705	PWY-4302	aerobic respiration III (alternative oxidase pathway)
XA09_RS11705	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XA09_RS11705	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS11705	PWY-6728	methylaspartate cycle
XA09_RS11705	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS11705	PWY-7254	TCA cycle VII (acetate-producers)
XA09_RS11705	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XA09_RS11710	PWY-3781	aerobic respiration I (cytochrome c)
XA09_RS11710	PWY-4302	aerobic respiration III (alternative oxidase pathway)
XA09_RS11710	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XA09_RS11710	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS11710	PWY-6728	methylaspartate cycle
XA09_RS11710	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS11710	PWY-7254	TCA cycle VII (acetate-producers)
XA09_RS11710	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XA09_RS11730	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS11730	PWY-5392	reductive TCA cycle II
XA09_RS11730	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XA09_RS11730	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS11730	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS11730	PWY-6728	methylaspartate cycle
XA09_RS11730	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS11730	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XA09_RS11730	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS11765	PWY-6825	phosphatidylcholine biosynthesis V
XA09_RS11830	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS11830	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS11830	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XA09_RS11830	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS11830	PWY-5723	Rubisco shunt
XA09_RS11830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS11830	PWY-6886	1-butanol autotrophic biosynthesis
XA09_RS11830	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS11830	PWY-7003	glycerol degradation to butanol
XA09_RS11830	PWY-7124	ethylene biosynthesis V (engineered)
XA09_RS11830	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XA09_RS11840	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XA09_RS11840	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XA09_RS11845	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
XA09_RS11845	PWY-7177	UTP and CTP dephosphorylation II
XA09_RS11845	PWY-7185	UTP and CTP dephosphorylation I
XA09_RS11865	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS11945	PWY-6672	<i>cis</i>-genanyl-CoA degradation
XA09_RS11945	PWY-7118	chitin degradation to ethanol
XA09_RS11960	PWY-3941	&beta;-alanine biosynthesis II
XA09_RS11960	PWY-5104	L-isoleucine biosynthesis IV
XA09_RS11960	PWY-5747	2-methylcitrate cycle II
XA09_RS11965	PWY-6672	<i>cis</i>-genanyl-CoA degradation
XA09_RS11965	PWY-7118	chitin degradation to ethanol
XA09_RS11990	PWY-5642	2,4-dinitrotoluene degradation
XA09_RS11990	PWY-6373	acrylate degradation
XA09_RS12110	PWY-5367	petroselinate biosynthesis
XA09_RS12110	PWY-5515	L-arabinose degradation II
XA09_RS12110	PWY-5525	D-glucuronate degradation I
XA09_RS12110	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XA09_RS12110	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XA09_RS12110	PWY-5989	stearate biosynthesis II (bacteria and plants)
XA09_RS12110	PWY-5994	palmitate biosynthesis I (animals and fungi)
XA09_RS12110	PWY-6113	superpathway of mycolate biosynthesis
XA09_RS12110	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XA09_RS12110	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XA09_RS12110	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XA09_RS12110	PWY-7663	gondoate biosynthesis (anaerobic)
XA09_RS12110	PWY-7664	oleate biosynthesis IV (anaerobic)
XA09_RS12110	PWYG-321	mycolate biosynthesis
XA09_RS12115	PWY-4381	fatty acid biosynthesis initiation I
XA09_RS12115	PWY-6799	fatty acid biosynthesis (plant mitochondria)
XA09_RS12115	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XA09_RS12120	PWY-4381	fatty acid biosynthesis initiation I
XA09_RS12145	PWY-2201	folate transformations I
XA09_RS12195	PWY-2941	L-lysine biosynthesis II
XA09_RS12195	PWY-2942	L-lysine biosynthesis III
XA09_RS12195	PWY-5097	L-lysine biosynthesis VI
XA09_RS12195	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS12195	PWY-6559	spermidine biosynthesis II
XA09_RS12195	PWY-6562	norspermidine biosynthesis
XA09_RS12195	PWY-7153	grixazone biosynthesis
XA09_RS12195	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XA09_RS12200	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XA09_RS12290	PWY-5964	guanylyl molybdenum cofactor biosynthesis
XA09_RS12290	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
XA09_RS12295	PWY-6823	molybdenum cofactor biosynthesis
XA09_RS12310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XA09_RS12355	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS12355	PWY-5686	UMP biosynthesis
XA09_RS12355	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XA09_RS12360	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS12360	PWY-5686	UMP biosynthesis
XA09_RS12360	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XA09_RS12365	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XA09_RS12365	PWY-5723	Rubisco shunt
XA09_RS12450	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS12470	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XA09_RS12470	PWY-622	starch biosynthesis
XA09_RS12480	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XA09_RS12480	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XA09_RS12480	PWY-5989	stearate biosynthesis II (bacteria and plants)
XA09_RS12480	PWY-5994	palmitate biosynthesis I (animals and fungi)
XA09_RS12480	PWY-6113	superpathway of mycolate biosynthesis
XA09_RS12480	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XA09_RS12480	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XA09_RS12480	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XA09_RS12480	PWY-7663	gondoate biosynthesis (anaerobic)
XA09_RS12480	PWY-7664	oleate biosynthesis IV (anaerobic)
XA09_RS12480	PWYG-321	mycolate biosynthesis
XA09_RS12505	PWY-7294	xylose degradation IV
XA09_RS12505	PWY-7295	L-arabinose degradation IV
XA09_RS12505	PWY-7560	methylerythritol phosphate pathway II
XA09_RS12510	PWY-5667	CDP-diacylglycerol biosynthesis I
XA09_RS12510	PWY-5981	CDP-diacylglycerol biosynthesis III
XA09_RS12560	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XA09_RS12560	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XA09_RS12560	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XA09_RS12560	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XA09_RS12575	PWY-2161	folate polyglutamylation
XA09_RS12640	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS12830	PWY-6654	phosphopantothenate biosynthesis III
XA09_RS12835	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS12835	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS12835	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XA09_RS12835	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS12835	PWY-5723	Rubisco shunt
XA09_RS12835	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS12835	PWY-6886	1-butanol autotrophic biosynthesis
XA09_RS12835	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS12835	PWY-7003	glycerol degradation to butanol
XA09_RS12835	PWY-7124	ethylene biosynthesis V (engineered)
XA09_RS12835	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XA09_RS12880	PWY-5392	reductive TCA cycle II
XA09_RS12880	PWY-5537	pyruvate fermentation to acetate V
XA09_RS12880	PWY-5538	pyruvate fermentation to acetate VI
XA09_RS12880	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS12880	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS12880	PWY-6728	methylaspartate cycle
XA09_RS12880	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS12880	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS12985	PWY-2622	trehalose biosynthesis IV
XA09_RS12990	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XA09_RS12990	PWY-622	starch biosynthesis
XA09_RS13000	PWY-2661	trehalose biosynthesis V
XA09_RS13000	PWY-6902	chitin degradation II
XA09_RS13010	PWY-2661	trehalose biosynthesis V
XA09_RS13020	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XA09_RS13020	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XA09_RS13025	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS13090	PWY-4202	arsenate detoxification I (glutaredoxin)
XA09_RS13090	PWY-4621	arsenate detoxification II (glutaredoxin)
XA09_RS13145	PWY-5669	phosphatidylethanolamine biosynthesis I
XA09_RS13215	PWY-3341	L-proline biosynthesis III
XA09_RS13215	PWY-4981	L-proline biosynthesis II (from arginine)
XA09_RS13215	PWY-6344	L-ornithine degradation II (Stickland reaction)
XA09_RS13255	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XA09_RS13255	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XA09_RS13305	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XA09_RS13460	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XA09_RS13460	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XA09_RS13460	PWY-7717	XA09_RS13460
XA09_RS13460	PWY-7733	XA09_RS13460
XA09_RS13460	PWY-7734	XA09_RS13460
XA09_RS13525	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS13835	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS13835	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS13835	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XA09_RS13835	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS13835	PWY-5723	Rubisco shunt
XA09_RS13835	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS13835	PWY-6886	1-butanol autotrophic biosynthesis
XA09_RS13835	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS13835	PWY-7003	glycerol degradation to butanol
XA09_RS13835	PWY-7124	ethylene biosynthesis V (engineered)
XA09_RS13835	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XA09_RS13890	PWY-5676	acetyl-CoA fermentation to butanoate II
XA09_RS13890	PWY-5741	ethylmalonyl-CoA pathway
XA09_RS13890	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XA09_RS13975	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XA09_RS13975	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XA09_RS13980	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XA09_RS13985	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XA09_RS14000	PWY-6891	thiazole biosynthesis II (Bacillus)
XA09_RS14000	PWY-6892	thiazole biosynthesis I (E. coli)
XA09_RS14000	PWY-7560	methylerythritol phosphate pathway II
XA09_RS14005	PWY-1281	sulfoacetaldehyde degradation I
XA09_RS14005	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XA09_RS14005	PWY-5482	pyruvate fermentation to acetate II
XA09_RS14005	PWY-5485	pyruvate fermentation to acetate IV
XA09_RS14005	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS14005	PWY-6637	sulfolactate degradation II
XA09_RS14005	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XA09_RS14190	PWY-702	L-methionine biosynthesis II
XA09_RS14230	PWY-6614	tetrahydrofolate biosynthesis
XA09_RS14235	PWY-6749	CMP-legionaminate biosynthesis I
XA09_RS14295	PWY-1281	sulfoacetaldehyde degradation I
XA09_RS14295	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XA09_RS14295	PWY-5482	pyruvate fermentation to acetate II
XA09_RS14295	PWY-5485	pyruvate fermentation to acetate IV
XA09_RS14295	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS14295	PWY-6637	sulfolactate degradation II
XA09_RS14295	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XA09_RS14315	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
XA09_RS14315	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
XA09_RS14315	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
XA09_RS14315	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
XA09_RS14315	PWY-6978	plastoquinol-9 biosynthesis II
XA09_RS14340	PWY-5194	siroheme biosynthesis
XA09_RS14340	PWY-5441	S-methyl-L-methionine cycle
XA09_RS14340	PWY-702	L-methionine biosynthesis II
XA09_RS14340	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
XA09_RS14355	PWY-7183	pyrimidine nucleobases salvage I
XA09_RS14360	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XA09_RS14360	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XA09_RS14365	PWY-6700	queuosine biosynthesis
XA09_RS14370	PWY-6700	queuosine biosynthesis
XA09_RS14595	PWY-1281	sulfoacetaldehyde degradation I
XA09_RS14595	PWY-5482	pyruvate fermentation to acetate II
XA09_RS14595	PWY-5485	pyruvate fermentation to acetate IV
XA09_RS14595	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS14595	PWY-6637	sulfolactate degradation II
XA09_RS14600	PWY-5482	pyruvate fermentation to acetate II
XA09_RS14600	PWY-5485	pyruvate fermentation to acetate IV
XA09_RS14600	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS14605	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XA09_RS14605	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XA09_RS14605	PWY-5989	stearate biosynthesis II (bacteria and plants)
XA09_RS14605	PWY-6113	superpathway of mycolate biosynthesis
XA09_RS14605	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XA09_RS14605	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XA09_RS14605	PWY-7663	gondoate biosynthesis (anaerobic)
XA09_RS14605	PWY-7664	oleate biosynthesis IV (anaerobic)
XA09_RS14605	PWYG-321	mycolate biosynthesis
XA09_RS14610	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS14610	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS14610	PWY-6886	1-butanol autotrophic biosynthesis
XA09_RS14610	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS14610	PWY-7003	glycerol degradation to butanol
XA09_RS14615	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS14615	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS14615	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS14615	PWY-7003	glycerol degradation to butanol
XA09_RS14620	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XA09_RS14620	PWY-5723	Rubisco shunt
XA09_RS14620	PWY-6891	thiazole biosynthesis II (Bacillus)
XA09_RS14620	PWY-6892	thiazole biosynthesis I (E. coli)
XA09_RS14620	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS14620	PWY-7560	methylerythritol phosphate pathway II
XA09_RS14625	PWY-2201	folate transformations I
XA09_RS14640	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XA09_RS14640	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XA09_RS14650	PWY-6891	thiazole biosynthesis II (Bacillus)
XA09_RS14650	PWY-6892	thiazole biosynthesis I (E. coli)
XA09_RS14650	PWY-7560	methylerythritol phosphate pathway II
XA09_RS14665	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
XA09_RS14665	PWY-2201	folate transformations I
XA09_RS14665	PWY-3841	folate transformations II
XA09_RS14665	PWY-5030	L-histidine degradation III
XA09_RS14665	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS14665	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XA09_RS14710	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
XA09_RS14710	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
XA09_RS14710	PWY-6148	tetrahydromethanopterin biosynthesis
XA09_RS14765	PWY-5278	sulfite oxidation III
XA09_RS14765	PWY-5340	sulfate activation for sulfonation
XA09_RS14765	PWY-6683	sulfate reduction III (assimilatory)
XA09_RS14765	PWY-6932	selenate reduction
XA09_RS14825	PWY-6936	seleno-amino acid biosynthesis
XA09_RS14870	PWY-7205	CMP phosphorylation
XA09_RS14875	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XA09_RS14880	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
XA09_RS14885	PWY-3461	L-tyrosine biosynthesis II
XA09_RS14885	PWY-3462	L-phenylalanine biosynthesis II
XA09_RS14885	PWY-6120	L-tyrosine biosynthesis III
XA09_RS14885	PWY-6627	salinosporamide A biosynthesis
XA09_RS14885	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
XA09_RS14885	PWY-7626	bacilysin biosynthesis
XA09_RS14905	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
XA09_RS14905	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
XA09_RS14905	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
XA09_RS14905	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
XA09_RS14905	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
XA09_RS14905	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
XA09_RS14905	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
XA09_RS14905	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
XA09_RS14905	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
XA09_RS14905	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
XA09_RS14910	PWY-181	photorespiration
XA09_RS15050	PWY-4381	fatty acid biosynthesis initiation I
XA09_RS15050	PWY-5743	3-hydroxypropanoate cycle
XA09_RS15050	PWY-5744	glyoxylate assimilation
XA09_RS15050	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS15050	PWY-6679	jadomycin biosynthesis
XA09_RS15050	PWY-6722	candicidin biosynthesis
XA09_RS15050	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XA09_RS15110	PWY-6803	phosphatidylcholine acyl editing
XA09_RS15110	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
XA09_RS15110	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
XA09_RS15110	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
XA09_RS15155	PWY-5101	L-isoleucine biosynthesis II
XA09_RS15155	PWY-5103	L-isoleucine biosynthesis III
XA09_RS15155	PWY-5104	L-isoleucine biosynthesis IV
XA09_RS15155	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
XA09_RS15155	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
XA09_RS15155	PWY-6389	(<i>S</i>)-acetoin biosynthesis
XA09_RS15155	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XA09_RS15160	PWY-5101	L-isoleucine biosynthesis II
XA09_RS15160	PWY-5103	L-isoleucine biosynthesis III
XA09_RS15160	PWY-5104	L-isoleucine biosynthesis IV
XA09_RS15160	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
XA09_RS15160	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
XA09_RS15160	PWY-6389	(<i>S</i>)-acetoin biosynthesis
XA09_RS15160	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XA09_RS15165	PWY-5103	L-isoleucine biosynthesis III
XA09_RS15165	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XA09_RS15170	PWY-5669	phosphatidylethanolamine biosynthesis I
XA09_RS15225	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS15225	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS15225	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS15225	PWY-7003	glycerol degradation to butanol
XA09_RS15250	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS15250	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS15250	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XA09_RS15250	PWY-5087	L-glutamate degradation VI (to pyruvate)
XA09_RS15250	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS15250	PWY-5723	Rubisco shunt
XA09_RS15250	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS15250	PWY-6728	methylaspartate cycle
XA09_RS15250	PWY-6886	1-butanol autotrophic biosynthesis
XA09_RS15250	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS15250	PWY-7003	glycerol degradation to butanol
XA09_RS15250	PWY-7124	ethylene biosynthesis V (engineered)
XA09_RS15250	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XA09_RS15290	PWY-6936	seleno-amino acid biosynthesis
XA09_RS15545	PWY-7560	methylerythritol phosphate pathway II
XA09_RS15550	PWY-7560	methylerythritol phosphate pathway II
XA09_RS15560	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS15780	PWY-3341	L-proline biosynthesis III
XA09_RS15780	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XA09_RS15850	PWY-6562	norspermidine biosynthesis
XA09_RS15890	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS15920	PWY-7158	L-phenylalanine degradation V
XA09_RS15960	PWY-1042	glycolysis IV (plant cytosol)
XA09_RS15960	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XA09_RS15960	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS15960	PWY-5723	Rubisco shunt
XA09_RS15960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS15960	PWY-6886	1-butanol autotrophic biosynthesis
XA09_RS15960	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS15960	PWY-7003	glycerol degradation to butanol
XA09_RS15960	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XA09_RS15960	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS15985	PWY-4041	&gamma;-glutamyl cycle
XA09_RS15985	PWY-5826	hypoglycin biosynthesis
XA09_RS16290	PWY-6683	sulfate reduction III (assimilatory)
XA09_RS16320	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS16325	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XA09_RS16325	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XA09_RS16325	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XA09_RS16325	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XA09_RS16370	PWY-6123	inosine-5'-phosphate biosynthesis I
XA09_RS16370	PWY-6124	inosine-5'-phosphate biosynthesis II
XA09_RS16370	PWY-7234	inosine-5'-phosphate biosynthesis III
XA09_RS16430	PWY-3801	sucrose degradation II (sucrose synthase)
XA09_RS16430	PWY-6527	stachyose degradation
XA09_RS16430	PWY-7238	sucrose biosynthesis II
XA09_RS16430	PWY-7343	UDP-glucose biosynthesis
XA09_RS16455	PWY-5057	L-valine degradation II
XA09_RS16455	PWY-5076	L-leucine degradation III
XA09_RS16455	PWY-5078	L-isoleucine degradation II
XA09_RS16455	PWY-5101	L-isoleucine biosynthesis II
XA09_RS16455	PWY-5103	L-isoleucine biosynthesis III
XA09_RS16455	PWY-5104	L-isoleucine biosynthesis IV
XA09_RS16455	PWY-5108	L-isoleucine biosynthesis V
XA09_RS16515	PWY-5686	UMP biosynthesis
XA09_RS16595	PWY-1281	sulfoacetaldehyde degradation I
XA09_RS16595	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XA09_RS16595	PWY-5482	pyruvate fermentation to acetate II
XA09_RS16595	PWY-5485	pyruvate fermentation to acetate IV
XA09_RS16595	PWY-5497	purine nucleobases degradation II (anaerobic)
XA09_RS16595	PWY-6637	sulfolactate degradation II
XA09_RS16595	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XA09_RS16675	PWY-6825	phosphatidylcholine biosynthesis V
XA09_RS16730	PWY-6167	flavin biosynthesis II (archaea)
XA09_RS16730	PWY-6168	flavin biosynthesis III (fungi)
XA09_RS16730	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XA09_RS16735	PWY-6167	flavin biosynthesis II (archaea)
XA09_RS16735	PWY-6168	flavin biosynthesis III (fungi)
XA09_RS16745	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XA09_RS16745	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XA09_RS16745	PWY-6896	thiamin salvage I
XA09_RS16745	PWY-6897	thiamin salvage II
XA09_RS16750	PWY-5269	cardiolipin biosynthesis II
XA09_RS16750	PWY-5668	cardiolipin biosynthesis I
XA09_RS16760	PWY-5686	UMP biosynthesis
XA09_RS16770	PWY-7039	phosphatidate metabolism, as a signaling molecule
XA09_RS16880	PWY-7255	ergothioneine biosynthesis I (bacteria)
XA09_RS17000	PWY-4983	L-citrulline-nitric oxide cycle
XA09_RS17000	PWY-4984	urea cycle
XA09_RS17000	PWY-5	canavanine biosynthesis
XA09_RS17000	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS17000	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XA09_RS17005	PWY-4981	L-proline biosynthesis II (from arginine)
XA09_RS17005	PWY-4984	urea cycle
XA09_RS17005	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XA09_RS17095	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
XA09_RS17095	PWY-5368	dimorphecolate biosynthesis
XA09_RS17095	PWY-5995	linoleate biosynthesis I (plants)
XA09_RS17095	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
XA09_RS17095	PWY-6803	phosphatidylcholine acyl editing
XA09_RS17095	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
XA09_RS17095	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
XA09_RS17095	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
XA09_RS17095	PWY-7470	phosphatidylcholine biosynthesis VII
XA09_RS17095	PWY-7618	ricinoleate biosynthesis
XA09_RS17235	PWY-5381	pyridine nucleotide cycling (plants)
XA09_RS17260	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS17275	PWY-4381	fatty acid biosynthesis initiation I
XA09_RS17275	PWY-5743	3-hydroxypropanoate cycle
XA09_RS17275	PWY-5744	glyoxylate assimilation
XA09_RS17275	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS17275	PWY-6679	jadomycin biosynthesis
XA09_RS17275	PWY-6722	candicidin biosynthesis
XA09_RS17275	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XA09_RS17375	PWY-6853	ethylene biosynthesis II (microbes)
XA09_RS17550	PWY-5392	reductive TCA cycle II
XA09_RS17550	PWY-5537	pyruvate fermentation to acetate V
XA09_RS17550	PWY-5538	pyruvate fermentation to acetate VI
XA09_RS17550	PWY-5690	TCA cycle II (plants and fungi)
XA09_RS17550	PWY-5913	TCA cycle VI (obligate autotrophs)
XA09_RS17550	PWY-6728	methylaspartate cycle
XA09_RS17550	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS17550	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XA09_RS17615	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XA09_RS17615	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XA09_RS17670	PWY-1622	formaldehyde assimilation I (serine pathway)
XA09_RS17670	PWY-5484	glycolysis II (from fructose 6-phosphate)
XA09_RS17690	PWY-5667	CDP-diacylglycerol biosynthesis I
XA09_RS17690	PWY-5981	CDP-diacylglycerol biosynthesis III
XA09_RS17700	PWY-6004	glycine betaine biosynthesis V (from glycine)
XA09_RS17710	PWY-2201	folate transformations I
XA09_RS17710	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XA09_RS17715	PWY-6840	homoglutathione biosynthesis
XA09_RS17715	PWY-7255	ergothioneine biosynthesis I (bacteria)
XA09_RS17800	PWY-5033	nicotinate degradation II
XA09_RS17800	PWY-6993	nicotine degradation II (pyrrolidine pathway)
XA09_RS17800	PWY-7128	nicotine degradation III (VPP pathway)
XA09_RS17800	PWY-722	nicotinate degradation I
XA09_RS17850	PWY-6825	phosphatidylcholine biosynthesis V
XA09_RS17935	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XA09_RS17935	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XA09_RS17960	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XA09_RS17960	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XA09_RS18015	PWY-3341	L-proline biosynthesis III
XA09_RS18015	PWY-4981	L-proline biosynthesis II (from arginine)
XA09_RS18015	PWY-6344	L-ornithine degradation II (Stickland reaction)
XA09_RS18015	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XA09_RS18020	PWY-31	canavanine degradation
XA09_RS18020	PWY-4984	urea cycle
XA09_RS18020	PWY-6305	putrescine biosynthesis IV
XA09_RS18020	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XA09_RS18060	PWY-5694	allantoin degradation to glyoxylate I
XA09_RS18060	PWY-5705	allantoin degradation to glyoxylate III
XA09_RS18095	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS18270	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS18340	PWY-4381	fatty acid biosynthesis initiation I
XA09_RS18340	PWY-5743	3-hydroxypropanoate cycle
XA09_RS18340	PWY-5744	glyoxylate assimilation
XA09_RS18340	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XA09_RS18340	PWY-6679	jadomycin biosynthesis
XA09_RS18340	PWY-6722	candicidin biosynthesis
XA09_RS18340	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XA09_RS18365	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XA09_RS18435	PWY-5101	L-isoleucine biosynthesis II
XA09_RS18435	PWY-5103	L-isoleucine biosynthesis III
XA09_RS18435	PWY-5104	L-isoleucine biosynthesis IV
XA09_RS18435	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
XA09_RS18435	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
XA09_RS18435	PWY-6389	(<i>S</i>)-acetoin biosynthesis
XA09_RS18435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XA09_RS18455	PWY-6167	flavin biosynthesis II (archaea)
XA09_RS18455	PWY-6168	flavin biosynthesis III (fungi)
XA09_RS18470	PWY-2201	folate transformations I
XA09_RS18470	PWY-3841	folate transformations II
XA09_RS18485	PWY-6891	thiazole biosynthesis II (Bacillus)
XA09_RS18485	PWY-6892	thiazole biosynthesis I (E. coli)
XA09_RS18490	PWY-6910	hydroxymethylpyrimidine salvage
XA09_RS18490	PWY-7356	thiamin salvage IV (yeast)
XA09_RS18490	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XA09_RS18740	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XA09_RS18740	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XA09_RS18765	PWY-2941	L-lysine biosynthesis II
XA09_RS18765	PWY-2942	L-lysine biosynthesis III
XA09_RS18765	PWY-5097	L-lysine biosynthesis VI
XA09_RS18785	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XA09_RS18790	PWY-6164	3-dehydroquinate biosynthesis I
XA09_RS18910	PWY-6728	methylaspartate cycle
XA09_RS18910	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XA09_RS18910	PWY-7118	chitin degradation to ethanol
XA09_RS18910	PWY-7294	xylose degradation IV
XA09_RS18910	PWY-7295	L-arabinose degradation IV
XA09_RS18945	PWY-2941	L-lysine biosynthesis II
XA09_RS18945	PWY-2942	L-lysine biosynthesis III
XA09_RS18945	PWY-5097	L-lysine biosynthesis VI
XA09_RS19075	PWY-5381	pyridine nucleotide cycling (plants)
XA09_RS19085	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XA09_RS19145	PWY-5316	nicotine biosynthesis
XA09_RS19145	PWY-5381	pyridine nucleotide cycling (plants)
XA09_RS19145	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XA09_RS19145	PWY-7342	superpathway of nicotine biosynthesis
XA09_RS19160	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
XA09_RS19170	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XA09_RS19170	PWY-5667	CDP-diacylglycerol biosynthesis I
XA09_RS19170	PWY-6453	stigma estolide biosynthesis
XA09_RS19170	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
XA09_RS19170	PWY-7587	oleate biosynthesis III (cyanobacteria)
XA09_RS19235	PWY-3781	aerobic respiration I (cytochrome c)
XA09_RS19235	PWY-4521	arsenite oxidation I (respiratory)
XA09_RS19235	PWY-6692	Fe(II) oxidation
XA09_RS19235	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XA09_RS19270	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XA09_RS19275	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XA09_RS19275	PWY-3162	L-tryptophan degradation V (side chain pathway)
XA09_RS19275	PWY-5057	L-valine degradation II
XA09_RS19275	PWY-5076	L-leucine degradation III
XA09_RS19275	PWY-5078	L-isoleucine degradation II
XA09_RS19275	PWY-5079	L-phenylalanine degradation III
XA09_RS19275	PWY-5082	L-methionine degradation III
XA09_RS19275	PWY-5480	pyruvate fermentation to ethanol I
XA09_RS19275	PWY-5486	pyruvate fermentation to ethanol II
XA09_RS19275	PWY-5751	phenylethanol biosynthesis
XA09_RS19275	PWY-6313	serotonin degradation
XA09_RS19275	PWY-6333	acetaldehyde biosynthesis I
XA09_RS19275	PWY-6342	noradrenaline and adrenaline degradation
XA09_RS19275	PWY-6454	vancomycin resistance I
XA09_RS19275	PWY-6587	pyruvate fermentation to ethanol III
XA09_RS19275	PWY-6802	salidroside biosynthesis
XA09_RS19275	PWY-6871	3-methylbutanol biosynthesis
XA09_RS19275	PWY-6901	superpathway of glucose and xylose degradation
XA09_RS19275	PWY-7013	L-1,2-propanediol degradation
XA09_RS19275	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XA09_RS19275	PWY-7118	chitin degradation to ethanol
XA09_RS19275	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XA09_RS19345	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XA09_RS19345	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XA09_RS19550	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XA09_RS19560	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XA09_RS19560	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XA09_RS19560	PWY-6897	thiamin salvage II
XA09_RS19560	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XA09_RS19560	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
XA09_RS19560	PWY-7356	thiamin salvage IV (yeast)
XA09_RS19560	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XA09_RS19645	PWY-4261	glycerol degradation I
