AC878_RS00005	SM01228	AC878_RS00005
AC878_RS00025	SM00470	ParB-like nuclease domain
AC878_RS00030	SM00870	AC878_RS00030
AC878_RS00070	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AC878_RS00070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AC878_RS00075	SM00649	Ribosomal protein L11/L12
AC878_RS00100	SM00663	RNA polymerase I subunit A N-terminus
AC878_RS00130	SM00448	cheY-homologous receiver domain
AC878_RS00130	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS00200	SM00563	Phosphate acyltransferases
AC878_RS00240	SM00421	helix_turn_helix, Lux Regulon
AC878_RS00290	SM00382	ATPases associated with a variety of cellular activities
AC878_RS00305	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS00400	SM00387	Histidine kinase-like ATPases
AC878_RS00410	SM00644	AC878_RS00410
AC878_RS00425	SM00382	ATPases associated with a variety of cellular activities
AC878_RS00425	SM00962	SRP54-type protein, GTPase domain
AC878_RS00425	SM00963	SRP54-type protein, helical bundle domain
AC878_RS00525	SM00382	ATPases associated with a variety of cellular activities
AC878_RS00545	SM00936	Penicillin-binding protein 5, C-terminal domain 
AC878_RS00565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC878_RS00610	SM00836	DALR anticodon binding domain
AC878_RS00610	SM01016	Arginyl tRNA synthetase N terminal dom
AC878_RS00645	SM00382	ATPases associated with a variety of cellular activities
AC878_RS00660	SM00382	ATPases associated with a variety of cellular activities
AC878_RS00695	SM00917	LeuA allosteric (dimerisation) domain
AC878_RS00750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS00750	SM00895	AC878_RS00750
AC878_RS00780	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS00790	SM00797	Allophanate hydrolase subunit 2
AC878_RS00795	SM00796	Allophanate hydrolase subunit 1
AC878_RS00820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS00820	SM00387	Histidine kinase-like ATPases
AC878_RS00820	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS00825	SM00448	cheY-homologous receiver domain
AC878_RS00825	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS00830	SM00091	PAS domain
AC878_RS00830	SM00387	Histidine kinase-like ATPases
AC878_RS00830	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS00835	SM00448	cheY-homologous receiver domain
AC878_RS00835	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS00845	SM00978	AC878_RS00845
AC878_RS00870	SM00382	ATPases associated with a variety of cellular activities
AC878_RS00885	SM00487	DEAD-like helicases superfamily
AC878_RS00885	SM00490	helicase superfamily c-terminal domain
AC878_RS00930	SM00450	Rhodanese Homology Domain
AC878_RS01025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS01025	SM00895	AC878_RS01025
AC878_RS01075	SM00882	Coenzyme A transferase
AC878_RS01080	SM00882	Coenzyme A transferase
AC878_RS01085	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS01105	SM00869	Autotransporter beta-domain
AC878_RS01140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS01140	SM00895	AC878_RS01140
AC878_RS01210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS01210	SM00895	AC878_RS01210
AC878_RS01250	SM00382	ATPases associated with a variety of cellular activities
AC878_RS01265	SM00853	MutL C terminal dimerisation domain
AC878_RS01265	SM01340	AC878_RS01265
AC878_RS01275	SM00646	AC878_RS01275
AC878_RS01355	SM00382	ATPases associated with a variety of cellular activities
AC878_RS01360	SM00382	ATPases associated with a variety of cellular activities
AC878_RS01445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC878_RS01475	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS01485	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS01535	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC878_RS01560	SM00382	ATPases associated with a variety of cellular activities
AC878_RS01565	SM00382	ATPases associated with a variety of cellular activities
AC878_RS01635	SM00732	Likely ribonuclease with RNase H fold.
AC878_RS01650	SM00563	Phosphate acyltransferases
AC878_RS01700	SM00849	Metallo-beta-lactamase superfamily
AC878_RS01730	SM00267	diguanylate cyclase
AC878_RS01755	SM00382	ATPases associated with a variety of cellular activities
AC878_RS01775	SM00965	Secretin and TonB N terminus short domain
AC878_RS01820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS01820	SM00895	AC878_RS01820
AC878_RS01835	SM01236	AC878_RS01835
AC878_RS01855	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS01880	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC878_RS01895	SM00845	GatB domain
AC878_RS01970	SM00749	bacterial OsmY and nodulation domain
AC878_RS02035	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS02075	SM00450	Rhodanese Homology Domain
AC878_RS02180	SM00479	AC878_RS02180
AC878_RS02210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS02215	SM00838	Elongation factor G C-terminus
AC878_RS02215	SM00889	Elongation factor G, domain IV
AC878_RS02285	SM00357	Cold shock protein domain
AC878_RS02295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS02295	SM00895	AC878_RS02295
AC878_RS02310	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC878_RS02375	SM00363	S4 RNA-binding domain
AC878_RS02380	SM00316	Ribosomal protein S1-like RNA-binding domain
AC878_RS02420	SM00954	Region found in RelA / SpoT proteins
AC878_RS02465	SM00478	endonuclease III
AC878_RS02465	SM00525	AC878_RS02465
AC878_RS02470	SM00382	ATPases associated with a variety of cellular activities
AC878_RS02475	SM00382	ATPases associated with a variety of cellular activities
AC878_RS02505	SM00382	ATPases associated with a variety of cellular activities
AC878_RS02530	SM00382	ATPases associated with a variety of cellular activities
AC878_RS02555	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC878_RS02555	SM00292	breast cancer carboxy-terminal domain
AC878_RS02555	SM00532	Ligase N family
AC878_RS02560	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AC878_RS02565	SM00968	SMC proteins Flexible Hinge Domain
AC878_RS02575	SM00986	Uracil DNA glycosylase superfamily
AC878_RS02575	SM00987	UreE urease accessory protein, C-terminal domain 
AC878_RS02585	SM00448	cheY-homologous receiver domain
AC878_RS02585	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS02600	SM00387	Histidine kinase-like ATPases
AC878_RS02600	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS02615	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS02635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS02635	SM00895	AC878_RS02635
AC878_RS02640	SM01130	AC878_RS02640
AC878_RS02695	SM00387	Histidine kinase-like ATPases
AC878_RS02695	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS02700	SM00448	cheY-homologous receiver domain
AC878_RS02700	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS02725	SM00411	bacterial (prokaryotic) histone like domain
AC878_RS02730	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AC878_RS02740	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AC878_RS02745	SM00316	Ribosomal protein S1-like RNA-binding domain
AC878_RS02745	SM00357	Cold shock protein domain
AC878_RS02745	SM00955	AC878_RS02745
AC878_RS02755	SM01144	AC878_RS02755
AC878_RS02790	SM00155	Phospholipase D. Active site motifs.
AC878_RS02835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC878_RS02840	SM00267	diguanylate cyclase
AC878_RS02895	SM00883	Chaperonin 10 Kd subunit
AC878_RS02905	SM00869	Autotransporter beta-domain
AC878_RS02925	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AC878_RS02965	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS03005	SM00880	AC878_RS03005
AC878_RS03010	SM00382	ATPases associated with a variety of cellular activities
AC878_RS03010	SM00962	SRP54-type protein, GTPase domain
AC878_RS03010	SM00963	SRP54-type protein, helical bundle domain
AC878_RS03045	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC878_RS03075	SM00382	ATPases associated with a variety of cellular activities
AC878_RS03095	SM00919	Malic enzyme, NAD binding domain
AC878_RS03095	SM01274	AC878_RS03095
AC878_RS03115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS03115	SM00895	AC878_RS03115
AC878_RS03195	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS03200	SM00852	Probable molybdopterin binding domain
AC878_RS03220	SM00487	DEAD-like helicases superfamily
AC878_RS03220	SM00490	helicase superfamily c-terminal domain
AC878_RS03295	SM01011	Aminopeptidase P, N-terminal domain
AC878_RS03320	SM00798	AICARFT/IMPCHase bienzyme
AC878_RS03320	SM00851	MGS-like domain
AC878_RS03330	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC878_RS03345	SM00382	ATPases associated with a variety of cellular activities
AC878_RS03350	SM00341	Helicase and RNase D C-terminal
AC878_RS03350	SM00487	DEAD-like helicases superfamily
AC878_RS03350	SM00490	helicase superfamily c-terminal domain
AC878_RS03350	SM00956	AC878_RS03350
AC878_RS03365	SM00947	Carbonic anhydrase
AC878_RS03390	SM00382	ATPases associated with a variety of cellular activities
AC878_RS03395	SM00382	ATPases associated with a variety of cellular activities
AC878_RS03635	SM00448	cheY-homologous receiver domain
AC878_RS03635	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS03690	SM00382	ATPases associated with a variety of cellular activities
AC878_RS03740	SM00650	Ribosomal RNA adenine dimethylases
AC878_RS03805	SM00382	ATPases associated with a variety of cellular activities
AC878_RS03825	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS03855	SM00867	YceI-like domain 
AC878_RS03860	SM00965	Secretin and TonB N terminus short domain
AC878_RS03885	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS03895	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS03900	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS03905	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AC878_RS03985	SM00382	ATPases associated with a variety of cellular activities
AC878_RS04005	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS04020	SM00382	ATPases associated with a variety of cellular activities
AC878_RS04050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS04050	SM00895	AC878_RS04050
AC878_RS04055	SM00869	Autotransporter beta-domain
AC878_RS04060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS04060	SM00895	AC878_RS04060
AC878_RS04065	SM00829	Enoylreductase
AC878_RS04085	SM00382	ATPases associated with a variety of cellular activities
AC878_RS04145	SM00487	DEAD-like helicases superfamily
AC878_RS04145	SM00490	helicase superfamily c-terminal domain
AC878_RS04145	SM00982	AC878_RS04145
AC878_RS04145	SM01058	CarD-like/TRCF domain
AC878_RS04230	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AC878_RS04235	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AC878_RS04295	SM00014	Acid phosphatase homologues
AC878_RS04355	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS04380	SM00450	Rhodanese Homology Domain
AC878_RS04440	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS04465	SM00829	Enoylreductase
AC878_RS04495	SM00316	Ribosomal protein S1-like RNA-binding domain
AC878_RS04495	SM00322	K homology RNA-binding domain
AC878_RS04500	SM01387	AC878_RS04500
AC878_RS04545	SM00382	ATPases associated with a variety of cellular activities
AC878_RS04625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS04625	SM00866	AC878_RS04625
AC878_RS04630	SM00878	Biotin carboxylase C-terminal domain
AC878_RS04680	SM00382	ATPases associated with a variety of cellular activities
AC878_RS04790	SM00434	DNA Topoisomerase IV
AC878_RS04800	SM00830	Chorismate mutase type II
AC878_RS04820	SM00316	Ribosomal protein S1-like RNA-binding domain
AC878_RS04825	SM00411	bacterial (prokaryotic) histone like domain
AC878_RS04875	SM00893	Electron transfer flavoprotein domain
AC878_RS04880	SM00893	Electron transfer flavoprotein domain
AC878_RS04915	SM00382	ATPases associated with a variety of cellular activities
AC878_RS04930	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC878_RS04980	SM00363	S4 RNA-binding domain
AC878_RS05025	SM00421	helix_turn_helix, Lux Regulon
AC878_RS05025	SM00448	cheY-homologous receiver domain
AC878_RS05030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC878_RS05030	SM00091	PAS domain
AC878_RS05030	SM00387	Histidine kinase-like ATPases
AC878_RS05030	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS05065	SM00861	Transketolase, pyrimidine binding domain
AC878_RS05070	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC878_RS05125	SM00271	DnaJ molecular chaperone homology domain
AC878_RS05145	SM00852	Probable molybdopterin binding domain
AC878_RS05165	SM00316	Ribosomal protein S1-like RNA-binding domain
AC878_RS05200	SM00448	cheY-homologous receiver domain
AC878_RS05205	SM00073	Histidine Phosphotransfer domain
AC878_RS05205	SM00260	Two component signalling adaptor domain
AC878_RS05205	SM00387	Histidine kinase-like ATPases
AC878_RS05205	SM01231	AC878_RS05205
AC878_RS05210	SM00260	Two component signalling adaptor domain
AC878_RS05215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC878_RS05215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS05225	SM00448	cheY-homologous receiver domain
AC878_RS05230	SM00448	cheY-homologous receiver domain
AC878_RS05270	SM01091	Transporter associated domain
AC878_RS05285	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC878_RS05310	SM01323	AC878_RS05310
AC878_RS05340	SM00869	Autotransporter beta-domain
AC878_RS05390	SM00919	Malic enzyme, NAD binding domain
AC878_RS05390	SM01274	AC878_RS05390
AC878_RS05415	SM00382	ATPases associated with a variety of cellular activities
AC878_RS05460	SM00382	ATPases associated with a variety of cellular activities
AC878_RS05470	SM01103	AC878_RS05470
AC878_RS05510	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC878_RS05530	SM00448	cheY-homologous receiver domain
AC878_RS05530	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS05535	SM00052	Putative diguanylate phosphodiesterase
AC878_RS05535	SM00267	diguanylate cyclase
AC878_RS05535	SM00387	Histidine kinase-like ATPases
AC878_RS05535	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS05545	SM00382	ATPases associated with a variety of cellular activities
AC878_RS05565	SM00382	ATPases associated with a variety of cellular activities
AC878_RS05590	SM00822	AC878_RS05590
AC878_RS05615	SM00382	ATPases associated with a variety of cellular activities
AC878_RS05625	SM00869	Autotransporter beta-domain
AC878_RS05650	SM00849	Metallo-beta-lactamase superfamily
AC878_RS05660	SM00481	DNA polymerase alpha chain like domain
AC878_RS05685	SM00919	Malic enzyme, NAD binding domain
AC878_RS05685	SM01274	AC878_RS05685
AC878_RS05695	SM00344	helix_turn_helix ASNC type
AC878_RS05705	SM00861	Transketolase, pyrimidine binding domain
AC878_RS05770	SM00316	Ribosomal protein S1-like RNA-binding domain
AC878_RS05770	SM00732	Likely ribonuclease with RNase H fold.
AC878_RS05775	SM00491	AC878_RS05775
AC878_RS05785	SM00363	S4 RNA-binding domain
AC878_RS05800	SM00822	AC878_RS05800
AC878_RS05855	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC878_RS05865	SM00822	AC878_RS05865
AC878_RS05890	SM01007	Class II Aldolase and Adducin N-terminal domain
AC878_RS05950	SM00382	ATPases associated with a variety of cellular activities
AC878_RS05965	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS06035	SM00100	Cyclic nucleotide-monophosphate binding domain
AC878_RS06035	SM00419	helix_turn_helix, cAMP Regulatory protein
AC878_RS06040	SM00382	ATPases associated with a variety of cellular activities
AC878_RS06040	SM01086	C-terminal, D2-small domain, of ClpB protein
AC878_RS06055	SM00869	Autotransporter beta-domain
AC878_RS06060	SM00869	Autotransporter beta-domain
AC878_RS06125	SM00382	ATPases associated with a variety of cellular activities
AC878_RS06160	SM01005	Alanine racemase, C-terminal domain
AC878_RS06185	SM00327	von Willebrand factor (vWF) type A domain
AC878_RS06190	SM00382	ATPases associated with a variety of cellular activities
AC878_RS06265	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AC878_RS06290	SM00363	S4 RNA-binding domain
AC878_RS06300	SM00316	Ribosomal protein S1-like RNA-binding domain
AC878_RS06340	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AC878_RS06340	SM00474	3'-5' exonuclease
AC878_RS06340	SM00475	5'-3' exonuclease
AC878_RS06340	SM00482	DNA polymerase A domain
AC878_RS06380	SM00357	Cold shock protein domain
AC878_RS06380	SM00382	ATPases associated with a variety of cellular activities
AC878_RS06380	SM00959	Rho termination factor, N-terminal domain
AC878_RS06390	SM00387	Histidine kinase-like ATPases
AC878_RS06390	SM00433	TopoisomeraseII
AC878_RS06400	SM00434	DNA Topoisomerase IV
AC878_RS06485	SM00382	ATPases associated with a variety of cellular activities
AC878_RS06520	SM00953	AC878_RS06520
AC878_RS06650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS06670	SM00642	Alpha-amylase domain
AC878_RS06680	SM00642	Alpha-amylase domain
AC878_RS06685	SM00642	Alpha-amylase domain
AC878_RS06690	SM00642	Alpha-amylase domain
AC878_RS06695	SM00642	Alpha-amylase domain
AC878_RS06700	SM00642	Alpha-amylase domain
AC878_RS06745	SM00155	Phospholipase D. Active site motifs.
AC878_RS06770	SM00869	Autotransporter beta-domain
AC878_RS06795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS06795	SM00895	AC878_RS06795
AC878_RS06800	SM00881	CoA binding domain
AC878_RS06825	SM00354	helix_turn _helix lactose operon repressor
AC878_RS06845	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC878_RS06860	SM00382	ATPases associated with a variety of cellular activities
AC878_RS06870	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS06895	SM00382	ATPases associated with a variety of cellular activities
AC878_RS06895	SM00962	SRP54-type protein, GTPase domain
AC878_RS06910	SM00858	AC878_RS06910
AC878_RS06955	SM00047	Lysozyme subfamily 2
AC878_RS06970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC878_RS06970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS06975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC878_RS06975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS06980	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC878_RS06980	SM00091	PAS domain
AC878_RS06980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC878_RS06980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS07045	SM00382	ATPases associated with a variety of cellular activities
AC878_RS07140	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC878_RS07185	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC878_RS07195	SM00935	Outer membrane protein (OmpH-like)
AC878_RS07255	SM00244	prohibitin homologues
AC878_RS07260	SM00267	diguanylate cyclase
AC878_RS07325	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AC878_RS07330	SM00851	MGS-like domain
AC878_RS07330	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AC878_RS07340	SM00855	Phosphoglycerate mutase family
AC878_RS07350	SM00382	ATPases associated with a variety of cellular activities
AC878_RS07370	SM00052	Putative diguanylate phosphodiesterase
AC878_RS07390	SM00852	Probable molybdopterin binding domain
AC878_RS07430	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC878_RS07465	SM00382	ATPases associated with a variety of cellular activities
AC878_RS07485	SM01329	AC878_RS07485
AC878_RS07490	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC878_RS07555	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC878_RS07555	SM00267	diguanylate cyclase
AC878_RS07575	SM00421	helix_turn_helix, Lux Regulon
AC878_RS07575	SM00448	cheY-homologous receiver domain
AC878_RS07580	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC878_RS07630	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS07645	SM00382	ATPases associated with a variety of cellular activities
AC878_RS07665	SM00834	Putative regulatory protein
AC878_RS07680	SM00421	helix_turn_helix, Lux Regulon
AC878_RS07710	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS07725	SM01001	AIR carboxylase
AC878_RS07740	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS07745	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS07755	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS07755	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC878_RS07765	SM00382	ATPases associated with a variety of cellular activities
AC878_RS07855	SM00382	ATPases associated with a variety of cellular activities
AC878_RS07865	SM00493	AC878_RS07865
AC878_RS07940	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AC878_RS07940	SM00534	ATPase domain of DNA mismatch repair MUTS family
AC878_RS07945	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AC878_RS07960	SM01130	AC878_RS07960
AC878_RS07980	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS07980	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC878_RS07990	SM00382	ATPases associated with a variety of cellular activities
AC878_RS07995	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC878_RS07995	SM00954	Region found in RelA / SpoT proteins
AC878_RS08000	SM01409	AC878_RS08000
AC878_RS08005	SM00072	Guanylate kinase homologues.
AC878_RS08020	SM00822	AC878_RS08020
AC878_RS08035	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS08070	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC878_RS08070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS08075	SM00052	Putative diguanylate phosphodiesterase
AC878_RS08075	SM00267	diguanylate cyclase
AC878_RS08090	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC878_RS08095	SM01230	AC878_RS08095
AC878_RS08100	SM00091	PAS domain
AC878_RS08100	SM00387	Histidine kinase-like ATPases
AC878_RS08100	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS08105	SM00382	ATPases associated with a variety of cellular activities
AC878_RS08105	SM00448	cheY-homologous receiver domain
AC878_RS08130	SM00382	ATPases associated with a variety of cellular activities
AC878_RS08175	SM00487	DEAD-like helicases superfamily
AC878_RS08175	SM00490	helicase superfamily c-terminal domain
AC878_RS08225	SM00382	ATPases associated with a variety of cellular activities
AC878_RS08250	SM00984	UDP binding domain
AC878_RS08300	SM00382	ATPases associated with a variety of cellular activities
AC878_RS08305	SM00382	ATPases associated with a variety of cellular activities
AC878_RS08360	SM00327	von Willebrand factor (vWF) type A domain
AC878_RS08365	SM00028	Tetratricopeptide repeats
AC878_RS08365	SM00327	von Willebrand factor (vWF) type A domain
AC878_RS08405	SM00421	helix_turn_helix, Lux Regulon
AC878_RS08405	SM00448	cheY-homologous receiver domain
AC878_RS08410	SM00869	Autotransporter beta-domain
AC878_RS08415	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS08520	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC878_RS08535	SM00822	AC878_RS08535
AC878_RS08635	SM00382	ATPases associated with a variety of cellular activities
AC878_RS08640	SM00382	ATPases associated with a variety of cellular activities
AC878_RS08720	SM00248	ankyrin repeats
AC878_RS08725	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS08730	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS08730	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC878_RS08740	SM00382	ATPases associated with a variety of cellular activities
AC878_RS08750	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC878_RS08790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS08790	SM00895	AC878_RS08790
AC878_RS08835	SM00052	Putative diguanylate phosphodiesterase
AC878_RS08840	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS08840	SM00073	Histidine Phosphotransfer domain
AC878_RS08840	SM00091	PAS domain
AC878_RS08840	SM00387	Histidine kinase-like ATPases
AC878_RS08840	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS08840	SM00448	cheY-homologous receiver domain
AC878_RS08845	SM00421	helix_turn_helix, Lux Regulon
AC878_RS08845	SM00448	cheY-homologous receiver domain
AC878_RS08850	SM00912	haemagglutination activity domain
AC878_RS08945	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS08965	SM01091	Transporter associated domain
AC878_RS08985	SM00028	Tetratricopeptide repeats
AC878_RS08990	SM00840	AC878_RS08990
AC878_RS08995	SM00478	endonuclease III
AC878_RS09110	SM00382	ATPases associated with a variety of cellular activities
AC878_RS09125	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS09130	SM00881	CoA binding domain
AC878_RS09160	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC878_RS09185	SM00028	Tetratricopeptide repeats
AC878_RS09200	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC878_RS09205	SM00421	helix_turn_helix, Lux Regulon
AC878_RS09210	SM00421	helix_turn_helix, Lux Regulon
AC878_RS09255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS09275	SM00318	Staphylococcal nuclease homologues
AC878_RS09295	SM00382	ATPases associated with a variety of cellular activities
AC878_RS09300	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC878_RS09345	SM00858	AC878_RS09345
AC878_RS09375	SM00028	Tetratricopeptide repeats
AC878_RS09390	SM00382	ATPases associated with a variety of cellular activities
AC878_RS09420	SM00841	Elongation factor P, C-terminal
AC878_RS09420	SM01185	AC878_RS09420
AC878_RS09480	SM00479	AC878_RS09480
AC878_RS09575	SM00869	Autotransporter beta-domain
AC878_RS09605	SM01209	AC878_RS09605
AC878_RS09605	SM01210	AC878_RS09605
AC878_RS09670	SM00382	ATPases associated with a variety of cellular activities
AC878_RS09690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS09695	SM01329	AC878_RS09695
AC878_RS09715	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC878_RS09730	SM00829	Enoylreductase
AC878_RS09745	SM00450	Rhodanese Homology Domain
AC878_RS09760	SM00382	ATPases associated with a variety of cellular activities
AC878_RS09805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC878_RS09805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS09920	SM00382	ATPases associated with a variety of cellular activities
AC878_RS09990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS09990	SM00331	Sigma factor PP2C-like phosphatases
AC878_RS09990	SM01049	AC878_RS09990
AC878_RS10000	SM01005	Alanine racemase, C-terminal domain
AC878_RS10015	SM00155	Phospholipase D. Active site motifs.
AC878_RS10025	SM00869	Autotransporter beta-domain
AC878_RS10060	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC878_RS10105	SM01207	AC878_RS10105
AC878_RS10120	SM00257	Lysin motif
AC878_RS10145	SM00422	helix_turn_helix, mercury resistance
AC878_RS10195	SM00749	bacterial OsmY and nodulation domain
AC878_RS10260	SM00344	helix_turn_helix ASNC type
AC878_RS10285	SM00904	Riboflavin kinase
AC878_RS10315	SM00965	Secretin and TonB N terminus short domain
AC878_RS10320	SM00382	ATPases associated with a variety of cellular activities
AC878_RS10355	SM00869	Autotransporter beta-domain
AC878_RS10370	SM00357	Cold shock protein domain
AC878_RS10400	SM00382	ATPases associated with a variety of cellular activities
AC878_RS10400	SM00994	ClpX C4-type zinc finger
AC878_RS10400	SM01086	C-terminal, D2-small domain, of ClpB protein
AC878_RS10405	SM00382	ATPases associated with a variety of cellular activities
AC878_RS10405	SM00464	Found in ATP-dependent protease La (LON)
AC878_RS10460	SM00882	Coenzyme A transferase
AC878_RS10465	SM00882	Coenzyme A transferase
AC878_RS10495	SM00869	Autotransporter beta-domain
AC878_RS10510	SM00487	DEAD-like helicases superfamily
AC878_RS10510	SM00490	helicase superfamily c-terminal domain
AC878_RS10515	SM00226	Low molecular weight phosphatase family
AC878_RS10540	SM00271	DnaJ molecular chaperone homology domain
AC878_RS10595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS10595	SM00866	AC878_RS10595
AC878_RS10655	SM00382	ATPases associated with a variety of cellular activities
AC878_RS10705	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC878_RS10755	SM00387	Histidine kinase-like ATPases
AC878_RS10755	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS10760	SM00448	cheY-homologous receiver domain
AC878_RS10775	SM00562	AC878_RS10775
AC878_RS10805	SM00564	beta-propeller repeat
AC878_RS10810	SM00382	ATPases associated with a variety of cellular activities
AC878_RS10830	SM00244	prohibitin homologues
AC878_RS10835	SM00244	prohibitin homologues
AC878_RS10845	SM00788	Adenylosuccinate synthetase
AC878_RS10860	SM00400	zinc finger
AC878_RS10860	SM00493	AC878_RS10860
AC878_RS10860	SM00766	DNA primase DnaG DnaB-binding
AC878_RS10910	SM00382	ATPases associated with a variety of cellular activities
AC878_RS11015	SM00382	ATPases associated with a variety of cellular activities
AC878_RS11055	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS11075	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC878_RS11090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS11090	SM00895	AC878_RS11090
AC878_RS11110	SM00382	ATPases associated with a variety of cellular activities
AC878_RS11145	SM00464	Found in ATP-dependent protease La (LON)
AC878_RS11155	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS11165	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC878_RS11260	SM00822	AC878_RS11260
AC878_RS11430	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC878_RS11430	SM00465	GIY-YIG type nucleases (URI domain)
AC878_RS11465	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS11485	SM00382	ATPases associated with a variety of cellular activities
AC878_RS11525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS11525	SM00895	AC878_RS11525
AC878_RS11545	SM00382	ATPases associated with a variety of cellular activities
AC878_RS11600	SM00411	bacterial (prokaryotic) histone like domain
AC878_RS11605	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC878_RS11695	SM00316	Ribosomal protein S1-like RNA-binding domain
AC878_RS11715	SM00382	ATPases associated with a variety of cellular activities
AC878_RS11780	SM00481	DNA polymerase alpha chain like domain
AC878_RS11790	SM00382	ATPases associated with a variety of cellular activities
AC878_RS11790	SM00487	DEAD-like helicases superfamily
AC878_RS11790	SM00490	helicase superfamily c-terminal domain
AC878_RS11790	SM00847	Helicase associated domain (HA2)  Add an annotation
AC878_RS11855	SM00382	ATPases associated with a variety of cellular activities
AC878_RS11940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS11940	SM00866	AC878_RS11940
AC878_RS11980	SM00981	AC878_RS11980
AC878_RS12035	SM00028	Tetratricopeptide repeats
AC878_RS12035	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS12045	SM01192	AC878_RS12045
AC878_RS12045	SM01193	AC878_RS12045
AC878_RS12100	SM00382	ATPases associated with a variety of cellular activities
AC878_RS12115	SM00882	Coenzyme A transferase
AC878_RS12275	SM00358	Double-stranded RNA binding motif
AC878_RS12275	SM00535	Ribonuclease III family
AC878_RS12285	SM00838	Elongation factor G C-terminus
AC878_RS12290	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC878_RS12315	SM00825	Beta-ketoacyl synthase
AC878_RS12325	SM00822	AC878_RS12325
AC878_RS12330	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AC878_RS12365	SM00644	AC878_RS12365
AC878_RS12410	SM01006	Siderophore biosynthesis protein domain
AC878_RS12430	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS12455	SM00267	diguanylate cyclase
AC878_RS12485	SM00382	ATPases associated with a variety of cellular activities
AC878_RS12495	SM00843	AC878_RS12495
AC878_RS12505	SM00463	Small MutS-related domain
AC878_RS12560	SM00448	cheY-homologous receiver domain
AC878_RS12560	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS12580	SM01329	AC878_RS12580
AC878_RS12605	SM00382	ATPases associated with a variety of cellular activities
AC878_RS12630	SM00271	DnaJ molecular chaperone homology domain
AC878_RS12780	SM00240	Forkhead associated domain
AC878_RS12780	SM00382	ATPases associated with a variety of cellular activities
AC878_RS12790	SM00858	AC878_RS12790
AC878_RS12860	SM00881	CoA binding domain
AC878_RS12890	SM00382	ATPases associated with a variety of cellular activities
AC878_RS12895	SM00448	cheY-homologous receiver domain
AC878_RS12895	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS12900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS12900	SM00387	Histidine kinase-like ATPases
AC878_RS12900	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS12915	SM00382	ATPases associated with a variety of cellular activities
AC878_RS12930	SM00822	AC878_RS12930
AC878_RS13040	SM00422	helix_turn_helix, mercury resistance
AC878_RS13045	SM00411	bacterial (prokaryotic) histone like domain
AC878_RS13050	SM00873	B3/4 domain
AC878_RS13050	SM00874	tRNA synthetase B5 domain
AC878_RS13050	SM00896	Ferredoxin-fold anticodon binding domain
AC878_RS13090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS13150	SM00354	helix_turn _helix lactose operon repressor
AC878_RS13155	SM00382	ATPases associated with a variety of cellular activities
AC878_RS13195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS13205	SM00829	Enoylreductase
AC878_RS13225	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS13245	SM00849	Metallo-beta-lactamase superfamily
AC878_RS13245	SM01027	Beta-Casp domain
AC878_RS13290	SM00382	ATPases associated with a variety of cellular activities
AC878_RS13305	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS13330	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS13345	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC878_RS13345	SM01240	AC878_RS13345
AC878_RS13355	SM00869	Autotransporter beta-domain
AC878_RS13395	SM00344	helix_turn_helix ASNC type
AC878_RS13430	SM00382	ATPases associated with a variety of cellular activities
AC878_RS13435	SM00382	ATPases associated with a variety of cellular activities
AC878_RS13440	SM00420	helix_turn_helix, Deoxyribose operon repressor
AC878_RS13440	SM01134	AC878_RS13440
AC878_RS13450	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS13495	SM01130	AC878_RS13495
AC878_RS13500	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS13535	SM01007	Class II Aldolase and Adducin N-terminal domain
AC878_RS13540	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS13545	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC878_RS13565	SM01211	AC878_RS13565
AC878_RS13665	SM00479	AC878_RS13665
AC878_RS13725	SM00938	Nitrogen regulatory protein P-II
AC878_RS13760	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC878_RS13765	SM00852	Probable molybdopterin binding domain
AC878_RS13770	SM00852	Probable molybdopterin binding domain
AC878_RS13820	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC878_RS13820	SM00876	Biotin and Thiamin Synthesis associated domain
AC878_RS13845	SM00422	helix_turn_helix, mercury resistance
AC878_RS13915	SM00938	Nitrogen regulatory protein P-II
AC878_RS13925	SM00869	Autotransporter beta-domain
AC878_RS13945	SM00382	ATPases associated with a variety of cellular activities
AC878_RS13950	SM00382	ATPases associated with a variety of cellular activities
AC878_RS13995	SM00382	ATPases associated with a variety of cellular activities
AC878_RS13995	SM01086	C-terminal, D2-small domain, of ClpB protein
AC878_RS14005	SM01359	AC878_RS14005
AC878_RS14005	SM01360	AC878_RS14005
AC878_RS14015	SM00357	Cold shock protein domain
AC878_RS14080	SM00822	AC878_RS14080
AC878_RS14165	SM00670	Large family of predicted nucleotide-binding domains
AC878_RS14180	SM00382	ATPases associated with a variety of cellular activities
AC878_RS14215	SM00861	Transketolase, pyrimidine binding domain
AC878_RS14230	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS14255	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC878_RS14255	SM00924	MgtE intracellular N domain
AC878_RS14310	SM00382	ATPases associated with a variety of cellular activities
AC878_RS14310	SM00930	AC878_RS14310
AC878_RS14365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS14365	SM00895	AC878_RS14365
AC878_RS14400	SM00382	ATPases associated with a variety of cellular activities
AC878_RS14430	SM00422	helix_turn_helix, mercury resistance
AC878_RS14455	SM00822	AC878_RS14455
AC878_RS14540	SM00822	AC878_RS14540
AC878_RS14565	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC878_RS14590	SM00829	Enoylreductase
AC878_RS14605	SM00382	ATPases associated with a variety of cellular activities
AC878_RS14630	SM00344	helix_turn_helix ASNC type
AC878_RS14675	SM00248	ankyrin repeats
AC878_RS14700	SM00382	ATPases associated with a variety of cellular activities
AC878_RS14735	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS14750	SM00382	ATPases associated with a variety of cellular activities
AC878_RS14790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS14790	SM00895	AC878_RS14790
AC878_RS14860	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AC878_RS14860	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AC878_RS14880	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS14915	SM00912	haemagglutination activity domain
AC878_RS14935	SM00528	Domain in histone-like proteins of HNS family
AC878_RS14975	SM00257	Lysin motif
AC878_RS15025	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC878_RS15050	SM00448	cheY-homologous receiver domain
AC878_RS15055	SM00387	Histidine kinase-like ATPases
AC878_RS15150	SM00363	S4 RNA-binding domain
AC878_RS15180	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC878_RS15220	SM00382	ATPases associated with a variety of cellular activities
AC878_RS15240	SM00487	DEAD-like helicases superfamily
AC878_RS15240	SM00490	helicase superfamily c-terminal domain
AC878_RS15250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS15250	SM00895	AC878_RS15250
AC878_RS15285	SM00344	helix_turn_helix ASNC type
AC878_RS15365	SM00878	Biotin carboxylase C-terminal domain
AC878_RS15395	SM00955	AC878_RS15395
AC878_RS15425	SM00344	helix_turn_helix ASNC type
AC878_RS15455	SM00957	SecA DEAD-like domain
AC878_RS15455	SM00958	SecA preprotein cross-linking domain
AC878_RS15475	SM00864	Tubulin/FtsZ family, GTPase domain
AC878_RS15475	SM00865	Tubulin/FtsZ family, C-terminal domain
AC878_RS15480	SM00842	Cell division protein FtsA
AC878_RS15550	SM00382	ATPases associated with a variety of cellular activities
AC878_RS15565	SM00151	SWI complex, BAF60b domains
AC878_RS15600	SM00344	helix_turn_helix ASNC type
AC878_RS15710	SM00382	ATPases associated with a variety of cellular activities
AC878_RS15710	SM01086	C-terminal, D2-small domain, of ClpB protein
AC878_RS15725	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AC878_RS15740	SM00382	ATPases associated with a variety of cellular activities
AC878_RS15810	SM00996	S-adenosyl-L-homocysteine hydrolase
AC878_RS15810	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AC878_RS15865	SM00487	DEAD-like helicases superfamily
AC878_RS15865	SM00490	helicase superfamily c-terminal domain
AC878_RS15870	SM00986	Uracil DNA glycosylase superfamily
AC878_RS15870	SM00987	UreE urease accessory protein, C-terminal domain 
AC878_RS15885	SM00155	Phospholipase D. Active site motifs.
AC878_RS15890	SM00382	ATPases associated with a variety of cellular activities
AC878_RS15935	SM00344	helix_turn_helix ASNC type
AC878_RS15935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS15980	SM00422	helix_turn_helix, mercury resistance
AC878_RS15980	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS16025	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS16035	SM00869	Autotransporter beta-domain
AC878_RS16140	SM01400	AC878_RS16140
AC878_RS16160	SM00028	Tetratricopeptide repeats
AC878_RS16165	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AC878_RS16165	SM01232	AC878_RS16165
AC878_RS16170	SM00849	Metallo-beta-lactamase superfamily
AC878_RS16205	SM00387	Histidine kinase-like ATPases
AC878_RS16205	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS16210	SM00448	cheY-homologous receiver domain
AC878_RS16210	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS16270	SM00984	UDP binding domain
AC878_RS16300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS16355	SM00988	UreE urease accessory protein, N-terminal domain
AC878_RS16385	SM00422	helix_turn_helix, mercury resistance
AC878_RS16405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS16405	SM00866	AC878_RS16405
AC878_RS16485	SM00382	ATPases associated with a variety of cellular activities
AC878_RS16490	SM00382	ATPases associated with a variety of cellular activities
AC878_RS16500	SM00822	AC878_RS16500
AC878_RS16585	SM00849	Metallo-beta-lactamase superfamily
AC878_RS16590	SM00257	Lysin motif
AC878_RS16630	SM00448	cheY-homologous receiver domain
AC878_RS16630	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS16635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS16635	SM00387	Histidine kinase-like ATPases
AC878_RS16725	SM00382	ATPases associated with a variety of cellular activities
AC878_RS16760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS16760	SM00866	AC878_RS16760
AC878_RS16785	SM00903	Flavin reductase like domain
AC878_RS16860	SM00925	MltA specific insert domain
AC878_RS16890	SM00905	Dihydroneopterin aldolase
AC878_RS16900	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC878_RS16960	SM00382	ATPases associated with a variety of cellular activities
AC878_RS16980	SM00487	DEAD-like helicases superfamily
AC878_RS16980	SM00490	helicase superfamily c-terminal domain
AC878_RS17005	SM00382	ATPases associated with a variety of cellular activities
AC878_RS17120	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS17160	SM00155	Phospholipase D. Active site motifs.
AC878_RS17180	SM00834	Putative regulatory protein
AC878_RS17210	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC878_RS17230	SM00382	ATPases associated with a variety of cellular activities
AC878_RS17285	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC878_RS17290	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AC878_RS17320	SM00937	AC878_RS17320
AC878_RS17355	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS17365	SM00881	CoA binding domain
AC878_RS17390	SM00344	helix_turn_helix ASNC type
AC878_RS17420	SM00881	CoA binding domain
AC878_RS17430	SM00829	Enoylreductase
AC878_RS17505	SM01130	AC878_RS17505
AC878_RS17565	SM00881	CoA binding domain
AC878_RS17570	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS17580	SM00861	Transketolase, pyrimidine binding domain
AC878_RS17620	SM00382	ATPases associated with a variety of cellular activities
AC878_RS17625	SM00382	ATPases associated with a variety of cellular activities
AC878_RS17655	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS17680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC878_RS17680	SM00245	tail specific protease
AC878_RS17690	SM00855	Phosphoglycerate mutase family
AC878_RS17695	SM00450	Rhodanese Homology Domain
AC878_RS17755	SM00382	ATPases associated with a variety of cellular activities
AC878_RS17775	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC878_RS17840	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC878_RS17855	SM00448	cheY-homologous receiver domain
AC878_RS17860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC878_RS17860	SM00387	Histidine kinase-like ATPases
AC878_RS17860	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS17935	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS17955	SM00344	helix_turn_helix ASNC type
AC878_RS18010	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC878_RS18030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS18030	SM00895	AC878_RS18030
AC878_RS18075	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS18095	SM00869	Autotransporter beta-domain
AC878_RS18125	SM01119	AC878_RS18125
AC878_RS18135	SM00244	prohibitin homologues
AC878_RS18230	SM00387	Histidine kinase-like ATPases
AC878_RS18230	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS18265	SM01234	AC878_RS18265
AC878_RS18280	SM00382	ATPases associated with a variety of cellular activities
AC878_RS18280	SM00760	Bacterial dnaA protein helix-turn-helix domain
AC878_RS18285	SM00480	DNA polymerase III beta subunit
AC878_RS18290	SM00387	Histidine kinase-like ATPases
AC878_RS18290	SM00433	TopoisomeraseII
AC878_RS18295	SM00346	helix_turn_helix isocitrate lyase regulation
AC878_RS18320	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS18320	SM00871	Bacterial transcription activator, effector binding domain
AC878_RS18340	SM00422	helix_turn_helix, mercury resistance
AC878_RS18345	SM00849	Metallo-beta-lactamase superfamily
AC878_RS18375	SM00878	Biotin carboxylase C-terminal domain
AC878_RS18375	SM01209	AC878_RS18375
AC878_RS18395	SM01119	AC878_RS18395
AC878_RS18430	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AC878_RS18430	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AC878_RS18430	SM00493	AC878_RS18430
AC878_RS18440	SM00382	ATPases associated with a variety of cellular activities
AC878_RS18470	SM00344	helix_turn_helix ASNC type
AC878_RS18480	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
AC878_RS18500	SM01018	B12 binding domain
AC878_RS18580	SM00838	Elongation factor G C-terminus
AC878_RS18580	SM00889	Elongation factor G, domain IV
AC878_RS18590	SM01403	AC878_RS18590
AC878_RS18610	SM01382	AC878_RS18610
AC878_RS18610	SM01383	AC878_RS18610
AC878_RS18625	SM00322	K homology RNA-binding domain
AC878_RS18660	SM01374	AC878_RS18660
AC878_RS18735	SM00363	S4 RNA-binding domain
AC878_RS18735	SM01390	AC878_RS18735
AC878_RS18740	SM00662	RNA polymerases D
AC878_RS18770	SM01004	Delta-aminolevulinic acid dehydratase
AC878_RS18805	SM01219	AC878_RS18805
AC878_RS18825	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC878_RS18875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS18875	SM00866	AC878_RS18875
AC878_RS18920	SM00382	ATPases associated with a variety of cellular activities
AC878_RS18945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS18945	SM00895	AC878_RS18945
AC878_RS18975	SM01130	AC878_RS18975
AC878_RS18990	SM00257	Lysin motif
AC878_RS19045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS19055	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS19060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC878_RS19075	SM00382	ATPases associated with a variety of cellular activities
AC878_RS19090	SM00829	Enoylreductase
AC878_RS19140	SM00382	ATPases associated with a variety of cellular activities
AC878_RS19190	SM00984	UDP binding domain
AC878_RS19280	SM00100	Cyclic nucleotide-monophosphate binding domain
AC878_RS19305	SM00829	Enoylreductase
AC878_RS19335	SM00382	ATPases associated with a variety of cellular activities
AC878_RS19445	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS19535	SM00342	helix_turn_helix, arabinose operon control protein
AC878_RS19650	SM00421	helix_turn_helix, Lux Regulon
AC878_RS19690	SM00382	ATPases associated with a variety of cellular activities
AC878_RS19705	SM00062	Bacterial periplasmic substrate-binding proteins
AC878_RS19710	SM00382	ATPases associated with a variety of cellular activities
AC878_RS19730	SM00478	endonuclease III
AC878_RS19735	SM00530	Helix-turn-helix XRE-family like proteins 
AC878_RS19810	SM01060	AC878_RS19810
AC878_RS19820	SM00382	ATPases associated with a variety of cellular activities
AC878_RS19840	SM00382	ATPases associated with a variety of cellular activities
AC878_RS19845	SM00382	ATPases associated with a variety of cellular activities
AC878_RS19875	SM00448	cheY-homologous receiver domain
AC878_RS19875	SM00862	Transcriptional regulatory protein, C terminal
AC878_RS19880	SM00387	Histidine kinase-like ATPases
AC878_RS19880	SM00388	His Kinase A (phosphoacceptor) domain
AC878_RS19905	SM00357	Cold shock protein domain
