locus-tag class description AVS55_RS00005 PF01134 Glucose inhibited division protein A AVS55_RS00005 PF13932 GidA associated domain AVS55_RS00010 PF02527 rRNA small subunit methyltransferase G AVS55_RS00015 PF13614 AAA domain AVS55_RS00025 PF02195 ParB-like nuclease domain AVS55_RS00025 PF17762 HTH domain found in ParB protein AVS55_RS00030 PF00710 Asparaginase, N-terminal AVS55_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain AVS55_RS00035 PF00710 Asparaginase, N-terminal AVS55_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain AVS55_RS00055 PF03143 Elongation factor Tu C-terminal domain AVS55_RS00055 PF00009 Elongation factor Tu GTP binding domain AVS55_RS00055 PF03144 Elongation factor Tu domain 2 AVS55_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVS55_RS00070 PF00467 KOW motif AVS55_RS00070 PF02357 Transcription termination factor nusG AVS55_RS00075 PF03946 Ribosomal protein L11, N-terminal domain AVS55_RS00075 PF00298 Ribosomal protein L11, RNA binding domain AVS55_RS00080 PF00687 Ribosomal protein L1p/L10e family AVS55_RS00085 PF00466 Ribosomal protein L10 AVS55_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain AVS55_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain AVS55_RS00095 PF04561 RNA polymerase Rpb2, domain 2 AVS55_RS00095 PF04560 RNA polymerase Rpb2, domain 7 AVS55_RS00095 PF00562 RNA polymerase Rpb2, domain 6 AVS55_RS00095 PF10385 RNA polymerase beta subunit external 1 domain AVS55_RS00095 PF04565 RNA polymerase Rpb2, domain 3 AVS55_RS00095 PF04563 RNA polymerase beta subunit AVS55_RS00100 PF04983 RNA polymerase Rpb1, domain 3 AVS55_RS00100 PF04998 RNA polymerase Rpb1, domain 5 AVS55_RS00100 PF04997 RNA polymerase Rpb1, domain 1 AVS55_RS00100 PF00623 RNA polymerase Rpb1, domain 2 AVS55_RS00100 PF05000 RNA polymerase Rpb1, domain 4 AVS55_RS00130 PF00072 Response regulator receiver domain AVS55_RS00130 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS00140 PF02515 CoA-transferase family III AVS55_RS00155 PF01575 MaoC like domain AVS55_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS00160 PF03466 LysR substrate binding domain AVS55_RS00165 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit AVS55_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit AVS55_RS00190 PF05746 DALR anticodon binding domain AVS55_RS00200 PF01553 Acyltransferase AVS55_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS00215 PF01327 Polypeptide deformylase AVS55_RS00250 PF02615 Malate/L-lactate dehydrogenase AVS55_RS00265 PF00561 alpha/beta hydrolase fold AVS55_RS00270 PF00561 alpha/beta hydrolase fold AVS55_RS00270 PF07021 Methionine biosynthesis protein MetW AVS55_RS00285 PF07690 Major Facilitator Superfamily AVS55_RS00295 PF01177 Asp/Glu/Hydantoin racemase AVS55_RS00300 PF00005 ABC transporter AVS55_RS00305 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00310 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00315 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS00350 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS00365 PF00175 Oxidoreductase NAD-binding domain AVS55_RS00365 PF00970 Oxidoreductase FAD-binding domain AVS55_RS00365 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS00370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS00380 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS00410 PF00183 Hsp90 protein AVS55_RS00415 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS00415 PF00043 Glutathione S-transferase, C-terminal domain AVS55_RS00420 PF01510 N-acetylmuramoyl-L-alanine amidase AVS55_RS00430 PF01578 Cytochrome C assembly protein AVS55_RS00435 PF02978 Signal peptide binding domain AVS55_RS00435 PF02881 SRP54-type protein, helical bundle domain AVS55_RS00435 PF00448 SRP54-type protein, GTPase domain AVS55_RS00450 PF02719 Polysaccharide biosynthesis protein AVS55_RS00460 PF10997 Alternate to MurJ AVS55_RS00465 PF00862 Sucrose synthase AVS55_RS00465 PF00534 Glycosyl transferases group 1 AVS55_RS00470 PF02397 Bacterial sugar transferase AVS55_RS00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVS55_RS00485 PF02350 UDP-N-acetylglucosamine 2-epimerase AVS55_RS00490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVS55_RS00495 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS00500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVS55_RS00500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVS55_RS00505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS55_RS00510 PF00534 Glycosyl transferases group 1 AVS55_RS00510 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVS55_RS00520 PF03309 Type III pantothenate kinase AVS55_RS00530 PF02405 Permease MlaE AVS55_RS00535 PF00005 ABC transporter AVS55_RS00555 PF00768 D-alanyl-D-alanine carboxypeptidase AVS55_RS00555 PF07943 Penicillin-binding protein 5, C-terminal domain AVS55_RS00560 PF01063 Amino-transferase class IV AVS55_RS00565 PF04359 Protein of unknown function (DUF493) AVS55_RS00570 PF03099 Biotin/lipoate A/B protein ligase family AVS55_RS00575 PF04055 Radical SAM superfamily AVS55_RS00575 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVS55_RS00580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVS55_RS00585 PF04321 RmlD substrate binding domain AVS55_RS00590 PF16363 GDP-mannose 4,6 dehydratase AVS55_RS00605 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS55_RS00610 PF00085 Thioredoxin AVS55_RS00610 PF01323 DSBA-like thioredoxin domain AVS55_RS00620 PF05746 DALR anticodon binding domain AVS55_RS00620 PF03485 Arginyl tRNA synthetase N terminal domain AVS55_RS00620 PF00750 tRNA synthetases class I (R) AVS55_RS00640 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00645 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00650 PF13416 Bacterial extracellular solute-binding protein AVS55_RS00655 PF00005 ABC transporter AVS55_RS00655 PF17912 MalK OB fold domain AVS55_RS00660 PF00149 Calcineurin-like phosphoesterase AVS55_RS00670 PF00005 ABC transporter AVS55_RS00670 PF12857 TOBE-like domain AVS55_RS00675 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00690 PF00356 Bacterial regulatory proteins, lacI family AVS55_RS00700 PF01425 Amidase AVS55_RS00705 PF00682 HMGL-like AVS55_RS00705 PF08502 LeuA allosteric (dimerisation) domain AVS55_RS00715 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVS55_RS00715 PF04963 Sigma-54 factor, core binding domain AVS55_RS00715 PF04552 Sigma-54, DNA binding domain AVS55_RS00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS00725 PF03466 LysR substrate binding domain AVS55_RS00740 PF13609 Gram-negative porin AVS55_RS00745 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS00745 PF00585 C-terminal regulatory domain of Threonine dehydratase AVS55_RS00760 PF07729 FCD domain AVS55_RS00760 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS00765 PF02515 CoA-transferase family III AVS55_RS00775 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS00785 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS00795 PF03746 LamB/YcsF family AVS55_RS00800 PF02626 Carboxyltransferase domain, subdomain A and B AVS55_RS00805 PF02682 Carboxyltransferase domain, subdomain C and D AVS55_RS00815 PF03466 LysR substrate binding domain AVS55_RS00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS00820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS55_RS00820 PF01842 ACT domain AVS55_RS00820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS00830 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS00830 PF00672 HAMP domain AVS55_RS00835 PF00072 Response regulator receiver domain AVS55_RS00835 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS00840 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS00840 PF00989 PAS fold AVS55_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS00840 PF11808 Phosphate regulon sensor protein PhoR AVS55_RS00845 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS00845 PF00072 Response regulator receiver domain AVS55_RS00850 PF01209 ubiE/COQ5 methyltransferase family AVS55_RS00865 PF03109 ABC1 family AVS55_RS00880 PF00005 ABC transporter AVS55_RS00880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS00885 PF04536 TPM domain AVS55_RS00895 PF00271 Helicase conserved C-terminal domain AVS55_RS00895 PF00270 DEAD/DEAH box helicase AVS55_RS00900 PF01810 LysE type translocator AVS55_RS00905 PF03144 Elongation factor Tu domain 2 AVS55_RS00905 PF16658 Class II release factor RF3, C-terminal domain AVS55_RS00905 PF00009 Elongation factor Tu GTP binding domain AVS55_RS00915 PF00210 Ferritin-like domain AVS55_RS00940 PF17773 UPF0176 acylphosphatase like domain AVS55_RS00940 PF00581 Rhodanese-like domain AVS55_RS00945 PF09334 tRNA synthetases class I (M) AVS55_RS00945 PF01588 Putative tRNA binding domain AVS55_RS00955 PF10609 NUBPL iron-transfer P-loop NTPase AVS55_RS00970 PF00692 dUTPase AVS55_RS00995 PF01276 Orn/Lys/Arg decarboxylase, major domain AVS55_RS00995 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AVS55_RS00995 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AVS55_RS01010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVS55_RS01010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVS55_RS01015 PF02535 ZIP Zinc transporter AVS55_RS01020 PF01571 Aminomethyltransferase folate-binding domain AVS55_RS01020 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVS55_RS01025 PF01597 Glycine cleavage H-protein AVS55_RS01030 PF02347 Glycine cleavage system P-protein AVS55_RS01035 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS01035 PF07729 FCD domain AVS55_RS01040 PF02515 CoA-transferase family III AVS55_RS01050 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS01070 PF12146 Serine aminopeptidase, S33 AVS55_RS01080 PF02426 Muconolactone delta-isomerase AVS55_RS01085 PF01144 Coenzyme A transferase AVS55_RS01090 PF01144 Coenzyme A transferase AVS55_RS01095 PF09339 IclR helix-turn-helix domain AVS55_RS01095 PF01614 Bacterial transcriptional regulator AVS55_RS01105 PF02667 Short chain fatty acid transporter AVS55_RS01110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS01110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS01115 PF00082 Subtilase family AVS55_RS01115 PF03797 Autotransporter beta-domain AVS55_RS01120 PF00311 Phosphoenolpyruvate carboxylase AVS55_RS01125 PF06508 Queuosine biosynthesis protein QueC AVS55_RS01155 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS01155 PF01565 FAD binding domain AVS55_RS01160 PF00171 Aldehyde dehydrogenase family AVS55_RS01165 PF13667 ThiC-associated domain AVS55_RS01165 PF01964 Radical SAM ThiC family AVS55_RS01170 PF02355 Protein export membrane protein AVS55_RS01170 PF07549 SecD/SecF GG Motif AVS55_RS01175 PF09518 HindIII restriction endonuclease AVS55_RS01205 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS01210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS01210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS01215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS01215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS01220 PF07702 UTRA domain AVS55_RS01220 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS01225 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS01230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS01240 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVS55_RS01250 PF01743 Poly A polymerase head domain AVS55_RS01250 PF12626 Polymerase A arginine-rich C-terminus AVS55_RS01250 PF12627 Probable RNA and SrmB- binding site of polymerase A AVS55_RS01260 PF00308 Bacterial dnaA protein AVS55_RS01265 PF00586 AIR synthase related protein, N-terminal domain AVS55_RS01265 PF02769 AIR synthase related protein, C-terminal domain AVS55_RS01275 PF08676 MutL C terminal dimerisation domain AVS55_RS01275 PF01119 DNA mismatch repair protein, C-terminal domain AVS55_RS01280 PF09335 SNARE associated Golgi protein AVS55_RS01285 PF11741 AMIN domain AVS55_RS01285 PF01520 N-acetylmuramoyl-L-alanine amidase AVS55_RS01290 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AVS55_RS01295 PF10415 Fumarase C C-terminus AVS55_RS01295 PF00206 Lyase AVS55_RS01305 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS01310 PF03466 LysR substrate binding domain AVS55_RS01320 PF02515 CoA-transferase family III AVS55_RS01325 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS01330 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS01330 PF18158 Adaptive response protein AidB N-terminal domain AVS55_RS01350 PF01654 Cytochrome bd terminal oxidase subunit I AVS55_RS01355 PF02322 Cytochrome bd terminal oxidase subunit II AVS55_RS01360 PF08173 Membrane bound YbgT-like protein AVS55_RS01365 PF00005 ABC transporter AVS55_RS01365 PF00664 ABC transporter transmembrane region AVS55_RS01370 PF00005 ABC transporter AVS55_RS01370 PF00664 ABC transporter transmembrane region AVS55_RS01375 PF00156 Phosphoribosyl transferase domain AVS55_RS01390 PF13609 Gram-negative porin AVS55_RS01420 PF04386 Stringent starvation protein B AVS55_RS01425 PF00043 Glutathione S-transferase, C-terminal domain AVS55_RS01425 PF02798 Glutathione S-transferase, N-terminal domain AVS55_RS01430 PF02167 Cytochrome C1 family AVS55_RS01435 PF00032 Cytochrome b(C-terminal)/b6/petD AVS55_RS01435 PF00033 Cytochrome b/b6/petB AVS55_RS01440 PF00355 Rieske [2Fe-2S] domain AVS55_RS01440 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVS55_RS01445 PF01741 Large-conductance mechanosensitive channel, MscL AVS55_RS01450 PF01784 NIF3 (NGG1p interacting factor 3) AVS55_RS01455 PF13180 PDZ domain AVS55_RS01465 PF04299 Putative FMN-binding domain AVS55_RS01470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS01475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS01480 PF07859 alpha/beta hydrolase fold AVS55_RS01490 PF00682 HMGL-like AVS55_RS01490 PF08502 LeuA allosteric (dimerisation) domain AVS55_RS01495 PF12833 Helix-turn-helix domain AVS55_RS01500 PF00920 Dehydratase family AVS55_RS01505 PF07690 Major Facilitator Superfamily AVS55_RS01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS01510 PF03466 LysR substrate binding domain AVS55_RS01520 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AVS55_RS01550 PF07859 alpha/beta hydrolase fold AVS55_RS01560 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS01565 PF11862 Domain of unknown function (DUF3382) AVS55_RS01565 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS01570 PF00005 ABC transporter AVS55_RS01570 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS01575 PF00005 ABC transporter AVS55_RS01590 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS01595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS01595 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS01595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS01600 PF00501 AMP-binding enzyme AVS55_RS01600 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS01620 PF00202 Aminotransferase class-III AVS55_RS01625 PF02581 Thiamine monophosphate synthase AVS55_RS01630 PF08543 Phosphomethylpyrimidine kinase AVS55_RS01635 PF00301 Rubredoxin AVS55_RS01640 PF02622 Uncharacterized ACR, COG1678 AVS55_RS01645 PF03652 Holliday junction resolvase AVS55_RS01650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS55_RS01650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS55_RS01655 PF01979 Amidohydrolase family AVS55_RS01660 PF01553 Acyltransferase AVS55_RS01665 PF00149 Calcineurin-like phosphoesterase AVS55_RS01675 PF00912 Transglycosylase AVS55_RS01690 PF00501 AMP-binding enzyme AVS55_RS01690 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS01695 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01710 PF12706 Beta-lactamase superfamily domain AVS55_RS01715 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS01720 PF03466 LysR substrate binding domain AVS55_RS01730 PF11737 Protein of unknown function (DUF3300) AVS55_RS01740 PF03707 Bacterial signalling protein N terminal repeat AVS55_RS01740 PF00563 EAL domain AVS55_RS01740 PF00990 Diguanylate cyclase, GGDEF domain AVS55_RS01745 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVS55_RS01745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVS55_RS01750 PF13532 2OG-Fe(II) oxygenase superfamily AVS55_RS01755 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AVS55_RS01760 PF04463 Protein of unknown function (DUF523) AVS55_RS01765 PF00005 ABC transporter AVS55_RS01770 PF01032 FecCD transport family AVS55_RS01775 PF01497 Periplasmic binding protein AVS55_RS01780 PF05171 Haemin-degrading HemS.ChuX domain AVS55_RS01785 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS01785 PF04886 PT repeat AVS55_RS01785 PF00593 TonB dependent receptor AVS55_RS01790 PF16220 Domain of unknown function (DUF4880) AVS55_RS01790 PF04773 FecR protein AVS55_RS01795 PF04542 Sigma-70 region 2 AVS55_RS01795 PF08281 Sigma-70, region 4 AVS55_RS01820 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVS55_RS01830 PF07729 FCD domain AVS55_RS01830 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS01850 PF00171 Aldehyde dehydrogenase family AVS55_RS01860 PF00175 Oxidoreductase NAD-binding domain AVS55_RS01860 PF00970 Oxidoreductase FAD-binding domain AVS55_RS01860 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS01885 PF03458 UPF0126 domain AVS55_RS01890 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVS55_RS01890 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVS55_RS01895 PF03372 Endonuclease/Exonuclease/phosphatase family AVS55_RS01900 PF00156 Phosphoribosyl transferase domain AVS55_RS01905 PF02637 GatB domain AVS55_RS01905 PF02934 GatB/GatE catalytic domain AVS55_RS01910 PF01425 Amidase AVS55_RS01915 PF02686 Glu-tRNAGln amidotransferase C subunit AVS55_RS01925 PF04085 rod shape-determining protein MreC AVS55_RS01935 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS01935 PF03717 Penicillin-binding Protein dimerisation domain AVS55_RS01940 PF01098 Cell cycle protein AVS55_RS01945 PF02615 Malate/L-lactate dehydrogenase AVS55_RS01950 PF00939 Sodium:sulfate symporter transmembrane region AVS55_RS01955 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS01965 PF00696 Amino acid kinase family AVS55_RS01970 PF03180 NLPA lipoprotein AVS55_RS01975 PF00578 AhpC/TSA family AVS55_RS01980 PF04972 BON domain AVS55_RS01985 PF13580 SIS domain AVS55_RS01995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS55_RS02000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVS55_RS02000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVS55_RS02020 PF02515 CoA-transferase family III AVS55_RS02025 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02030 PF02515 CoA-transferase family III AVS55_RS02045 PF09339 IclR helix-turn-helix domain AVS55_RS02050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS02060 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS02065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS02065 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS02070 PF02515 CoA-transferase family III AVS55_RS02075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS02075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS02075 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS02080 PF03466 LysR substrate binding domain AVS55_RS02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02090 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02100 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02110 PF00892 EamA-like transporter family AVS55_RS02115 PF01810 LysE type translocator AVS55_RS02120 PF12146 Serine aminopeptidase, S33 AVS55_RS02140 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVS55_RS02145 PF00535 Glycosyl transferase family 2 AVS55_RS02165 PF03616 Sodium/glutamate symporter AVS55_RS02175 PF02667 Short chain fatty acid transporter AVS55_RS02190 PF00929 Exonuclease AVS55_RS02195 PF00873 AcrB/AcrD/AcrF family AVS55_RS02220 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02225 PF03466 LysR substrate binding domain AVS55_RS02230 PF01565 FAD binding domain AVS55_RS02230 PF09330 D-lactate dehydrogenase, membrane binding AVS55_RS02235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02235 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS02240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02240 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS02245 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02250 PF07687 Peptidase dimerisation domain AVS55_RS02250 PF01546 Peptidase family M20/M25/M40 AVS55_RS02260 PF01042 Endoribonuclease L-PSP AVS55_RS02270 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS02270 PF00107 Zinc-binding dehydrogenase AVS55_RS02275 PF03466 LysR substrate binding domain AVS55_RS02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02280 PF13380 CoA binding domain AVS55_RS02280 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS02285 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS02295 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02300 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AVS55_RS02305 PF01380 SIS domain AVS55_RS02310 PF01037 Lrp/AsnC ligand binding domain AVS55_RS02315 PF02803 Thiolase, C-terminal domain AVS55_RS02315 PF00108 Thiolase, N-terminal domain AVS55_RS02320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS02320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS02320 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS02325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS02325 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02325 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVS55_RS02330 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02335 PF13380 CoA binding domain AVS55_RS02335 PF00583 Acetyltransferase (GNAT) family AVS55_RS02335 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS02350 PF01568 Molydopterin dinucleotide binding domain AVS55_RS02350 PF00384 Molybdopterin oxidoreductase AVS55_RS02370 PF01488 Shikimate / quinate 5-dehydrogenase AVS55_RS02370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVS55_RS02370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVS55_RS02375 PF00472 RF-1 domain AVS55_RS02375 PF03462 PCRF domain AVS55_RS02380 PF05175 Methyltransferase small domain AVS55_RS02380 PF17827 PrmC N-terminal domain AVS55_RS02385 PF00462 Glutaredoxin AVS55_RS02390 PF02441 Flavoprotein AVS55_RS02395 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02400 PF09084 NMT1/THI5 like AVS55_RS02405 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVS55_RS02405 PF00941 FAD binding domain in molybdopterin dehydrogenase AVS55_RS02410 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVS55_RS02410 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS55_RS02430 PF03330 Lytic transglycolase AVS55_RS02430 PF05036 Sporulation related domain AVS55_RS02435 PF03668 P-loop ATPase protein family AVS55_RS02445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS02445 PF00034 Cytochrome c AVS55_RS02445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS55_RS02450 PF07475 HPr Serine kinase C-terminal domain AVS55_RS02450 PF02603 HPr Serine kinase N terminus AVS55_RS02455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVS55_RS02460 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVS55_RS02465 PF00005 ABC transporter AVS55_RS02485 PF00571 CBS domain AVS55_RS02485 PF01380 SIS domain AVS55_RS02490 PF02222 ATP-grasp domain AVS55_RS02490 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS02495 PF00593 TonB dependent receptor AVS55_RS02495 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS02505 PF00732 GMC oxidoreductase AVS55_RS02505 PF05199 GMC oxidoreductase AVS55_RS02525 PF01336 OB-fold nucleic acid binding domain AVS55_RS02525 PF00152 tRNA synthetases class II (D, K and N) AVS55_RS02525 PF02938 GAD domain AVS55_RS02530 PF03372 Endonuclease/Exonuclease/phosphatase family AVS55_RS02535 PF13091 PLD-like domain AVS55_RS02560 PF13458 Periplasmic binding protein AVS55_RS02565 PF01425 Amidase AVS55_RS02570 PF05995 Cysteine dioxygenase type I AVS55_RS02575 PF09339 IclR helix-turn-helix domain AVS55_RS02575 PF01614 Bacterial transcriptional regulator AVS55_RS02580 PF02515 CoA-transferase family III AVS55_RS02585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS02585 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS02585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS02590 PF05275 Copper resistance protein B precursor (CopB) AVS55_RS02595 PF00394 Multicopper oxidase AVS55_RS02595 PF07731 Multicopper oxidase AVS55_RS02595 PF07732 Multicopper oxidase AVS55_RS02625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS02625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS02625 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AVS55_RS02630 PF02515 CoA-transferase family III AVS55_RS02635 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS02635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02650 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS02655 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS02660 PF01256 Carbohydrate kinase AVS55_RS02680 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS02685 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS02685 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS55_RS02690 PF00005 ABC transporter AVS55_RS02690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS02700 PF07687 Peptidase dimerisation domain AVS55_RS02700 PF01546 Peptidase family M20/M25/M40 AVS55_RS02710 PF13361 UvrD-like helicase C-terminal domain AVS55_RS02710 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS02715 PF00270 DEAD/DEAH box helicase AVS55_RS02715 PF17764 3′ DNA-binding domain (3′BD) AVS55_RS02715 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVS55_RS02715 PF18074 Primosomal protein N C-terminal domain AVS55_RS02715 PF00271 Helicase conserved C-terminal domain AVS55_RS02720 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVS55_RS02730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVS55_RS02735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS02735 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS55_RS02740 PF00231 ATP synthase AVS55_RS02745 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS55_RS02745 PF00306 ATP synthase alpha/beta chain, C terminal domain AVS55_RS02745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS02750 PF00213 ATP synthase delta (OSCP) subunit AVS55_RS02755 PF00430 ATP synthase B/B' CF(0) AVS55_RS02760 PF00137 ATP synthase subunit C AVS55_RS02765 PF00119 ATP synthase A chain AVS55_RS02790 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS02795 PF13180 PDZ domain AVS55_RS02795 PF17820 PDZ domain AVS55_RS02800 PF13192 Thioredoxin domain AVS55_RS02800 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS02810 PF01171 PP-loop family AVS55_RS02820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS55_RS02820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS02820 PF01842 ACT domain AVS55_RS02825 PF13098 Thioredoxin-like domain AVS55_RS02825 PF10411 Disulfide bond isomerase protein N-terminus AVS55_RS02830 PF01494 FAD binding domain AVS55_RS02835 PF03562 MltA specific insert domain AVS55_RS02835 PF06725 3D domain AVS55_RS02840 PF04379 ApaG domain AVS55_RS02845 PF00834 Ribulose-phosphate 3 epimerase family AVS55_RS02850 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS02855 PF04715 Anthranilate synthase component I, N terminal region AVS55_RS02855 PF00425 chorismate binding enzyme AVS55_RS02860 PF00117 Glutamine amidotransferase class-I AVS55_RS02865 PF00591 Glycosyl transferase family, a/b domain AVS55_RS02865 PF02885 Glycosyl transferase family, helical bundle domain AVS55_RS02870 PF00218 Indole-3-glycerol phosphate synthase AVS55_RS02890 PF18158 Adaptive response protein AidB N-terminal domain AVS55_RS02890 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02895 PF03466 LysR substrate binding domain AVS55_RS02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02900 PF00551 Formyl transferase AVS55_RS02910 PF01613 Flavin reductase like domain AVS55_RS02915 PF01243 Pyridoxamine 5'-phosphate oxidase AVS55_RS02915 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVS55_RS02925 PF07690 Major Facilitator Superfamily AVS55_RS02930 PF00899 ThiF family AVS55_RS02935 PF07702 UTRA domain AVS55_RS02935 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS02940 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS02940 PF00501 AMP-binding enzyme AVS55_RS02945 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02960 PF01063 Amino-transferase class IV AVS55_RS02965 PF04715 Anthranilate synthase component I, N terminal region AVS55_RS02965 PF00425 chorismate binding enzyme AVS55_RS02970 PF17760 UvrA interaction domain AVS55_RS02970 PF17755 UvrA DNA-binding domain AVS55_RS02970 PF00005 ABC transporter AVS55_RS02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02980 PF03466 LysR substrate binding domain AVS55_RS02985 PF00535 Glycosyl transferase family 2 AVS55_RS02990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS02995 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS03010 PF12848 ABC transporter AVS55_RS03010 PF00005 ABC transporter AVS55_RS03030 PF03776 Septum formation topological specificity factor MinE AVS55_RS03035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVS55_RS03040 PF03775 Septum formation inhibitor MinC, C-terminal domain AVS55_RS03040 PF05209 Septum formation inhibitor MinC, N-terminal domain AVS55_RS03045 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AVS55_RS03045 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVS55_RS03050 PF01654 Cytochrome bd terminal oxidase subunit I AVS55_RS03060 PF13493 Domain of unknown function (DUF4118) AVS55_RS03060 PF02702 Osmosensitive K+ channel His kinase sensor domain AVS55_RS03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS03065 PF00072 Response regulator receiver domain AVS55_RS03065 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS03080 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS03085 PF04391 Protein of unknown function (DUF533) AVS55_RS03105 PF01476 LysM domain AVS55_RS03105 PF01464 Transglycosylase SLT domain AVS55_RS03110 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVS55_RS03110 PF00753 Metallo-beta-lactamase superfamily AVS55_RS03115 PF08241 Methyltransferase domain AVS55_RS03120 PF00075 RNase H AVS55_RS03130 PF00732 GMC oxidoreductase AVS55_RS03130 PF05199 GMC oxidoreductase AVS55_RS03170 PF01575 MaoC like domain AVS55_RS03175 PF00108 Thiolase, N-terminal domain AVS55_RS03175 PF02803 Thiolase, C-terminal domain AVS55_RS03185 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS03190 PF00106 short chain dehydrogenase AVS55_RS03200 PF00005 ABC transporter AVS55_RS03200 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS03205 PF00005 ABC transporter AVS55_RS03210 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS03220 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS03220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS03220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS03225 PF08361 MAATS-type transcriptional repressor, C-terminal region AVS55_RS03225 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS03230 PF00501 AMP-binding enzyme AVS55_RS03230 PF14535 AMP-binding enzyme C-terminal domain AVS55_RS03235 PF02515 CoA-transferase family III AVS55_RS03255 PF04285 Protein of unknown function (DUF444) AVS55_RS03260 PF04293 SpoVR like protein AVS55_RS03275 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS03280 PF07476 Methylaspartate ammonia-lyase C-terminus AVS55_RS03280 PF05034 Methylaspartate ammonia-lyase N-terminus AVS55_RS03285 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS03285 PF07702 UTRA domain AVS55_RS03300 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS03305 PF00376 MerR family regulatory protein AVS55_RS03305 PF09278 MerR, DNA binding AVS55_RS03310 PF01774 UreD urease accessory protein AVS55_RS03315 PF00547 Urease, gamma subunit AVS55_RS03320 PF04955 HupE / UreJ protein AVS55_RS03325 PF00699 Urease beta subunit AVS55_RS03330 PF00449 Urease alpha-subunit, N-terminal domain AVS55_RS03330 PF01979 Amidohydrolase family AVS55_RS03335 PF05194 UreE urease accessory protein, C-terminal domain AVS55_RS03335 PF02814 UreE urease accessory protein, N-terminal domain AVS55_RS03340 PF01730 UreF AVS55_RS03345 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS55_RS03355 PF07364 Metallopeptidase family M81 AVS55_RS03355 PF07171 MlrC C-terminus AVS55_RS03365 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS03370 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS03375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS03385 PF00202 Aminotransferase class-III AVS55_RS03390 PF00155 Aminotransferase class I and II AVS55_RS03390 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS03395 PF00186 Dihydrofolate reductase AVS55_RS03400 PF00303 Thymidylate synthase AVS55_RS03410 PF03232 Ubiquinone biosynthesis protein COQ7 AVS55_RS03415 PF00953 Glycosyl transferase family 4 AVS55_RS03420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS55_RS03420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS55_RS03420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS55_RS03425 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS03430 PF03023 Lipid II flippase MurJ AVS55_RS03435 PF13439 Glycosyltransferase Family 4 AVS55_RS03435 PF00534 Glycosyl transferases group 1 AVS55_RS03440 PF13537 Glutamine amidotransferase domain AVS55_RS03440 PF00733 Asparagine synthase AVS55_RS03445 PF00534 Glycosyl transferases group 1 AVS55_RS03445 PF13439 Glycosyltransferase Family 4 AVS55_RS03450 PF13439 Glycosyltransferase Family 4 AVS55_RS03450 PF00534 Glycosyl transferases group 1 AVS55_RS03455 PF00534 Glycosyl transferases group 1 AVS55_RS03455 PF13477 Glycosyl transferase 4-like AVS55_RS03460 PF00342 Phosphoglucose isomerase AVS55_RS03465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS55_RS03465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS55_RS03465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS55_RS03465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS55_RS03475 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS03475 PF01565 FAD binding domain AVS55_RS03480 PF00072 Response regulator receiver domain AVS55_RS03480 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS03485 PF08521 Two-component sensor kinase N-terminal AVS55_RS03485 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS03490 PF00884 Sulfatase AVS55_RS03500 PF04209 homogentisate 1,2-dioxygenase AVS55_RS03505 PF03466 LysR substrate binding domain AVS55_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS03515 PF01494 FAD binding domain AVS55_RS03525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVS55_RS03525 PF06827 Zinc finger found in FPG and IleRS AVS55_RS03525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVS55_RS03535 PF03550 Outer membrane lipoprotein LolB AVS55_RS03540 PF08544 GHMP kinases C terminal AVS55_RS03540 PF00288 GHMP kinases N terminal domain AVS55_RS03550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVS55_RS03550 PF14572 Phosphoribosyl synthetase-associated domain AVS55_RS03555 PF14693 Ribosomal protein TL5, C-terminal domain AVS55_RS03555 PF01386 Ribosomal L25p family AVS55_RS03560 PF01195 Peptidyl-tRNA hydrolase AVS55_RS03570 PF01926 50S ribosome-binding GTPase AVS55_RS03570 PF06071 Protein of unknown function (DUF933) AVS55_RS03575 PF00589 Phage integrase family AVS55_RS03575 PF13356 Arm DNA-binding domain AVS55_RS03595 PF01555 DNA methylase AVS55_RS03600 PF13175 AAA ATPase domain AVS55_RS03635 PF13361 UvrD-like helicase C-terminal domain AVS55_RS03635 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS03655 PF12951 Passenger-associated-transport-repeat AVS55_RS03665 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS03665 PF00072 Response regulator receiver domain AVS55_RS03680 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS03680 PF17938 Tetracyclin repressor-like, C-terminal domain AVS55_RS03710 PF01266 FAD dependent oxidoreductase AVS55_RS03725 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS03735 PF01810 LysE type translocator AVS55_RS03780 PF00561 alpha/beta hydrolase fold AVS55_RS03790 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS03795 PF03459 TOBE domain AVS55_RS03795 PF00005 ABC transporter AVS55_RS03800 PF13091 PLD-like domain AVS55_RS03810 PF03167 Uracil DNA glycosylase superfamily AVS55_RS03815 PF00271 Helicase conserved C-terminal domain AVS55_RS03815 PF00270 DEAD/DEAH box helicase AVS55_RS03825 PF12627 Probable RNA and SrmB- binding site of polymerase A AVS55_RS03825 PF01743 Poly A polymerase head domain AVS55_RS03830 PF01464 Transglycosylase SLT domain AVS55_RS03830 PF14718 Soluble lytic murein transglycosylase L domain AVS55_RS03840 PF00083 Sugar (and other) transporter AVS55_RS03840 PF07690 Major Facilitator Superfamily AVS55_RS03845 PF00850 Histone deacetylase domain AVS55_RS03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS03850 PF03466 LysR substrate binding domain AVS55_RS03860 PF02219 Methylenetetrahydrofolate reductase AVS55_RS03865 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AVS55_RS03870 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVS55_RS03870 PF05221 S-adenosyl-L-homocysteine hydrolase AVS55_RS03875 PF00534 Glycosyl transferases group 1 AVS55_RS03875 PF13439 Glycosyltransferase Family 4 AVS55_RS03885 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVS55_RS03885 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVS55_RS03885 PF02772 S-adenosylmethionine synthetase, central domain AVS55_RS03895 PF03279 Bacterial lipid A biosynthesis acyltransferase AVS55_RS03900 PF01678 Diaminopimelate epimerase AVS55_RS03910 PF00589 Phage integrase family AVS55_RS03910 PF02899 Phage integrase, N-terminal SAM-like domain AVS55_RS03915 PF00593 TonB dependent receptor AVS55_RS03915 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS03920 PF03824 High-affinity nickel-transport protein AVS55_RS03930 PF01297 Zinc-uptake complex component A periplasmic AVS55_RS03935 PF00950 ABC 3 transport family AVS55_RS03940 PF00005 ABC transporter AVS55_RS03950 PF01475 Ferric uptake regulator family AVS55_RS03955 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS55_RS03955 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVS55_RS03960 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVS55_RS03965 PF00227 Proteasome subunit AVS55_RS03970 PF07724 AAA domain (Cdc48 subfamily) AVS55_RS03970 PF10431 C-terminal, D2-small domain, of ClpB protein AVS55_RS03970 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS03980 PF01923 Cobalamin adenosyltransferase AVS55_RS03995 PF02525 Flavodoxin-like fold AVS55_RS04000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS04000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS04010 PF01970 Tripartite tricarboxylate transporter TctA family AVS55_RS04050 PF01790 Prolipoprotein diacylglyceryl transferase AVS55_RS04055 PF00920 Dehydratase family AVS55_RS04060 PF00034 Cytochrome c AVS55_RS04065 PF01625 Peptide methionine sulfoxide reductase AVS55_RS04070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS04075 PF01037 Lrp/AsnC ligand binding domain AVS55_RS04115 PF07687 Peptidase dimerisation domain AVS55_RS04115 PF01546 Peptidase family M20/M25/M40 AVS55_RS04120 PF01979 Amidohydrolase family AVS55_RS04125 PF12848 ABC transporter AVS55_RS04125 PF16326 ABC transporter C-terminal domain AVS55_RS04125 PF00005 ABC transporter AVS55_RS04135 PF02381 MraZ protein, putative antitoxin-like AVS55_RS04140 PF01795 MraW methylase family AVS55_RS04145 PF04999 Cell division protein FtsL AVS55_RS04150 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS04150 PF03717 Penicillin-binding Protein dimerisation domain AVS55_RS04155 PF08245 Mur ligase middle domain AVS55_RS04155 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS04160 PF00953 Glycosyl transferase family 4 AVS55_RS04165 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS04165 PF08245 Mur ligase middle domain AVS55_RS04170 PF01098 Cell cycle protein AVS55_RS04175 PF04101 Glycosyltransferase family 28 C-terminal domain AVS55_RS04175 PF03033 Glycosyltransferase family 28 N-terminal domain AVS55_RS04180 PF08245 Mur ligase middle domain AVS55_RS04180 PF01225 Mur ligase family, catalytic domain AVS55_RS04180 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS04185 PF01820 D-ala D-ala ligase N-terminus AVS55_RS04185 PF07478 D-ala D-ala ligase C-terminus AVS55_RS04190 PF03799 Cell division protein FtsQ AVS55_RS04190 PF08478 POTRA domain, FtsQ-type AVS55_RS04195 PF02491 SHS2 domain inserted in FTSA AVS55_RS04200 PF12327 FtsZ family, C-terminal domain AVS55_RS04200 PF00091 Tubulin/FtsZ family, GTPase domain AVS55_RS04205 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVS55_RS04215 PF01476 LysM domain AVS55_RS04215 PF08525 Opacity-associated protein A N-terminal motif AVS55_RS04215 PF01551 Peptidase family M23 AVS55_RS04220 PF02810 SEC-C motif AVS55_RS04220 PF01043 SecA preprotein cross-linking domain AVS55_RS04220 PF07517 SecA DEAD-like domain AVS55_RS04220 PF07516 SecA Wing and Scaffold domain AVS55_RS04230 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS04240 PF00106 short chain dehydrogenase AVS55_RS04245 PF01266 FAD dependent oxidoreductase AVS55_RS04250 PF01037 Lrp/AsnC ligand binding domain AVS55_RS04260 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AVS55_RS04270 PF08501 Shikimate dehydrogenase substrate binding domain AVS55_RS04270 PF01488 Shikimate / quinate 5-dehydrogenase AVS55_RS04270 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVS55_RS04280 PF00773 RNB domain AVS55_RS04285 PF05728 Uncharacterised protein family (UPF0227) AVS55_RS04290 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS04290 PF08245 Mur ligase middle domain AVS55_RS04290 PF01225 Mur ligase family, catalytic domain AVS55_RS04295 PF08534 Redoxin AVS55_RS04300 PF01220 Dehydroquinase class II AVS55_RS04305 PF00364 Biotin-requiring enzyme AVS55_RS04310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS04310 PF00289 Biotin carboxylase, N-terminal domain AVS55_RS04310 PF02785 Biotin carboxylase C-terminal domain AVS55_RS04325 PF00294 pfkB family carbohydrate kinase AVS55_RS04350 PF03062 MBOAT, membrane-bound O-acyltransferase family AVS55_RS04355 PF00501 AMP-binding enzyme AVS55_RS04355 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS04370 PF00268 Ribonucleotide reductase, small chain AVS55_RS04375 PF02867 Ribonucleotide reductase, barrel domain AVS55_RS04375 PF03477 ATP cone domain AVS55_RS04375 PF00317 Ribonucleotide reductase, all-alpha domain AVS55_RS04390 PF01037 Lrp/AsnC ligand binding domain AVS55_RS04405 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVS55_RS04410 PF13380 CoA binding domain AVS55_RS04410 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS04410 PF00583 Acetyltransferase (GNAT) family AVS55_RS04425 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS04425 PF07729 FCD domain AVS55_RS04435 PF00270 DEAD/DEAH box helicase AVS55_RS04435 PF03880 DbpA RNA binding domain AVS55_RS04435 PF00271 Helicase conserved C-terminal domain AVS55_RS04440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS04445 PF00857 Isochorismatase family AVS55_RS04450 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS04455 PF00005 ABC transporter AVS55_RS04465 PF02230 Phospholipase/Carboxylesterase AVS55_RS04470 PF04751 Protein of unknown function (DUF615) AVS55_RS04475 PF01523 Putative modulator of DNA gyrase AVS55_RS04480 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS04485 PF00572 Ribosomal protein L13 AVS55_RS04490 PF00380 Ribosomal protein S9/S16 AVS55_RS04495 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVS55_RS04495 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVS55_RS04505 PF01521 Iron-sulphur cluster biosynthesis AVS55_RS04510 PF03702 Anhydro-N-acetylmuramic acid kinase AVS55_RS04515 PF01551 Peptidase family M23 AVS55_RS04515 PF08460 Bacterial SH3 domain AVS55_RS04525 PF01479 S4 domain AVS55_RS04525 PF00579 tRNA synthetases class I (W and Y) AVS55_RS04535 PF00464 Serine hydroxymethyltransferase AVS55_RS04540 PF03477 ATP cone domain AVS55_RS04555 PF01872 RibD C-terminal domain AVS55_RS04555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS55_RS04570 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS04570 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS04570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS04570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS04570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS04570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS04580 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS04585 PF03466 LysR substrate binding domain AVS55_RS04590 PF02515 CoA-transferase family III AVS55_RS04610 PF02678 Pirin AVS55_RS04610 PF05726 Pirin C-terminal cupin domain AVS55_RS04625 PF00072 Response regulator receiver domain AVS55_RS04630 PF06481 COX Aromatic Rich Motif AVS55_RS04630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVS55_RS04635 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS55_RS04640 PF00510 Cytochrome c oxidase subunit III AVS55_RS04645 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVS55_RS04650 PF01022 Bacterial regulatory protein, arsR family AVS55_RS04670 PF05114 Protein of unknown function (DUF692) AVS55_RS04685 PF00593 TonB dependent receptor AVS55_RS04685 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS04700 PF01476 LysM domain AVS55_RS04700 PF01551 Peptidase family M23 AVS55_RS04715 PF04461 Protein of unknown function (DUF520) AVS55_RS04725 PF08281 Sigma-70, region 4 AVS55_RS04725 PF04542 Sigma-70 region 2 AVS55_RS04745 PF00795 Carbon-nitrogen hydrolase AVS55_RS04750 PF01523 Putative modulator of DNA gyrase AVS55_RS04755 PF00793 DAHP synthetase I family AVS55_RS04760 PF05860 haemagglutination activity domain AVS55_RS04760 PF13018 Extended Signal Peptide of Type V secretion system AVS55_RS04760 PF05860 haemagglutination activity domain AVS55_RS04760 PF13332 Hemagglutinin repeat AVS55_RS04760 PF05594 Haemagluttinin repeat AVS55_RS04760 PF05594 Haemagluttinin repeat AVS55_RS04760 PF13018 Extended Signal Peptide of Type V secretion system AVS55_RS04760 PF13332 Hemagglutinin repeat AVS55_RS04765 PF01565 FAD binding domain AVS55_RS04765 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS04770 PF01565 FAD binding domain AVS55_RS04770 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS04775 PF01565 FAD binding domain AVS55_RS04780 PF13183 4Fe-4S dicluster domain AVS55_RS04780 PF02754 Cysteine-rich domain AVS55_RS04785 PF00756 Putative esterase AVS55_RS04790 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS04790 PF00593 TonB dependent receptor AVS55_RS04800 PF02233 NAD(P) transhydrogenase beta subunit AVS55_RS04805 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVS55_RS04810 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVS55_RS04815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVS55_RS04815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVS55_RS04825 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS04830 PF03466 LysR substrate binding domain AVS55_RS04830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS04840 PF01925 Sulfite exporter TauE/SafE AVS55_RS04845 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS04845 PF00043 Glutathione S-transferase, C-terminal domain AVS55_RS04850 PF08328 Adenylosuccinate lyase C-terminal AVS55_RS04850 PF00206 Lyase AVS55_RS04855 PF01322 Cytochrome C' AVS55_RS04875 PF01594 AI-2E family transporter AVS55_RS04885 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS04885 PF07729 FCD domain AVS55_RS04895 PF01425 Amidase AVS55_RS04900 PF02515 CoA-transferase family III AVS55_RS04905 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS04925 PF00005 ABC transporter AVS55_RS04940 PF01614 Bacterial transcriptional regulator AVS55_RS04940 PF09339 IclR helix-turn-helix domain AVS55_RS04950 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS04950 PF00501 AMP-binding enzyme AVS55_RS04955 PF01042 Endoribonuclease L-PSP AVS55_RS04960 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS04975 PF00005 ABC transporter AVS55_RS04980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS55_RS04995 PF03466 LysR substrate binding domain AVS55_RS04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS55_RS05010 PF07690 Major Facilitator Superfamily AVS55_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05015 PF03466 LysR substrate binding domain AVS55_RS05030 PF01425 Amidase AVS55_RS05035 PF00677 Lumazine binding domain AVS55_RS05040 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05045 PF13404 AsnC-type helix-turn-helix domain AVS55_RS05045 PF01037 Lrp/AsnC ligand binding domain AVS55_RS05055 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS05055 PF00501 AMP-binding enzyme AVS55_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05070 PF00005 ABC transporter AVS55_RS05085 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS05085 PF00107 Zinc-binding dehydrogenase AVS55_RS05105 PF00403 Heavy-metal-associated domain AVS55_RS05110 PF01966 HD domain AVS55_RS05115 PF00155 Aminotransferase class I and II AVS55_RS05120 PF03466 LysR substrate binding domain AVS55_RS05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05130 PF00083 Sugar (and other) transporter AVS55_RS05150 PF13609 Gram-negative porin AVS55_RS05155 PF02548 Ketopantoate hydroxymethyltransferase AVS55_RS05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05160 PF03466 LysR substrate binding domain AVS55_RS05225 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS05235 PF05170 AsmA family AVS55_RS05240 PF03352 Methyladenine glycosylase AVS55_RS05245 PF09278 MerR, DNA binding AVS55_RS05245 PF00376 MerR family regulatory protein AVS55_RS05260 PF01547 Bacterial extracellular solute-binding protein AVS55_RS05270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS05270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS05275 PF00005 ABC transporter AVS55_RS05275 PF08402 TOBE domain AVS55_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05285 PF14785 Maltose transport system permease protein MalF P2 domain AVS55_RS05285 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05305 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05310 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS05310 PF07729 FCD domain AVS55_RS05340 PF00465 Iron-containing alcohol dehydrogenase AVS55_RS05355 PF03180 NLPA lipoprotein AVS55_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05365 PF09383 NIL domain AVS55_RS05365 PF00005 ABC transporter AVS55_RS05370 PF13802 Galactose mutarotase-like AVS55_RS05370 PF01055 Glycosyl hydrolases family 31 AVS55_RS05380 PF00459 Inositol monophosphatase family AVS55_RS05395 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS05395 PF00501 AMP-binding enzyme AVS55_RS05400 PF07687 Peptidase dimerisation domain AVS55_RS05400 PF01546 Peptidase family M20/M25/M40 AVS55_RS05405 PF03466 LysR substrate binding domain AVS55_RS05405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05410 PF03601 Conserved hypothetical protein 698 AVS55_RS05415 PF03061 Thioesterase superfamily AVS55_RS05420 PF00571 CBS domain AVS55_RS05420 PF03448 MgtE intracellular N domain AVS55_RS05420 PF01769 Divalent cation transporter AVS55_RS05440 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05450 PF02609 Exonuclease VII small subunit AVS55_RS05455 PF00348 Polyprenyl synthetase AVS55_RS05460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVS55_RS05460 PF02780 Transketolase, C-terminal domain AVS55_RS05460 PF02779 Transketolase, pyrimidine binding domain AVS55_RS05465 PF02649 Type I GTP cyclohydrolase folE2 AVS55_RS05470 PF01250 Ribosomal protein S6 AVS55_RS05480 PF01084 Ribosomal protein S18 AVS55_RS05485 PF01281 Ribosomal protein L9, N-terminal domain AVS55_RS05485 PF03948 Ribosomal protein L9, C-terminal domain AVS55_RS05495 PF00772 DnaB-like helicase N terminal domain AVS55_RS05495 PF03796 DnaB-like helicase C terminal domain AVS55_RS05500 PF13593 SBF-like CPA transporter family (DUF4137) AVS55_RS05505 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVS55_RS05510 PF13638 PIN domain AVS55_RS05510 PF02562 PhoH-like protein AVS55_RS05515 PF00578 AhpC/TSA family AVS55_RS05520 PF04430 Protein of unknown function (DUF498/DUF598) AVS55_RS05525 PF00155 Aminotransferase class I and II AVS55_RS05530 PF03447 Homoserine dehydrogenase, NAD binding domain AVS55_RS05530 PF00742 Homoserine dehydrogenase AVS55_RS05530 PF01842 ACT domain AVS55_RS05535 PF14821 Threonine synthase N terminus AVS55_RS05535 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS05550 PF02615 Malate/L-lactate dehydrogenase AVS55_RS05560 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05575 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS55_RS05580 PF01649 Ribosomal protein S20 AVS55_RS05590 PF03023 Lipid II flippase MurJ AVS55_RS05595 PF00106 short chain dehydrogenase AVS55_RS05600 PF05191 Adenylate kinase, active site lid AVS55_RS05605 PF02348 Cytidylyltransferase AVS55_RS05610 PF03966 Trm112p-like protein AVS55_RS05615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVS55_RS05620 PF02472 Biopolymer transport protein ExbD/TolR AVS55_RS05625 PF01618 MotA/TolQ/ExbB proton channel family AVS55_RS05635 PF02601 Exonuclease VII, large subunit AVS55_RS05635 PF13742 OB-fold nucleic acid binding domain AVS55_RS05640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVS55_RS05640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVS55_RS05645 PF00654 Voltage gated chloride channel AVS55_RS05650 PF02803 Thiolase, C-terminal domain AVS55_RS05650 PF00108 Thiolase, N-terminal domain AVS55_RS05660 PF00313 'Cold-shock' DNA-binding domain AVS55_RS05665 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVS55_RS05670 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AVS55_RS05670 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AVS55_RS05670 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AVS55_RS05670 PF01835 MG2 domain AVS55_RS05670 PF00207 Alpha-2-macroglobulin family AVS55_RS05670 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AVS55_RS05670 PF07703 Alpha-2-macroglobulin bait region domain AVS55_RS05670 PF17962 Bacterial macroglobulin domain 6 AVS55_RS05675 PF06832 Penicillin-Binding Protein C-terminus Family AVS55_RS05675 PF00912 Transglycosylase AVS55_RS05675 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS05680 PF17871 AAA lid domain AVS55_RS05680 PF02861 Clp amino terminal domain, pathogenicity island component AVS55_RS05680 PF10431 C-terminal, D2-small domain, of ClpB protein AVS55_RS05680 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS05680 PF07724 AAA domain (Cdc48 subfamily) AVS55_RS05685 PF04403 Paraquat-inducible protein A AVS55_RS05690 PF02470 MlaD protein AVS55_RS05700 PF00171 Aldehyde dehydrogenase family AVS55_RS05700 PF01619 Proline dehydrogenase AVS55_RS05700 PF14850 DNA-binding domain of Proline dehydrogenase AVS55_RS05700 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVS55_RS05710 PF13458 Periplasmic binding protein AVS55_RS05715 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS05720 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS05720 PF11862 Domain of unknown function (DUF3382) AVS55_RS05725 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS05725 PF00005 ABC transporter AVS55_RS05730 PF00005 ABC transporter AVS55_RS05735 PF07690 Major Facilitator Superfamily AVS55_RS05740 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS05750 PF03797 Autotransporter beta-domain AVS55_RS05750 PF03212 Pertactin AVS55_RS05760 PF00543 Nitrogen regulatory protein P-II AVS55_RS05765 PF04380 Membrane fusogenic activity AVS55_RS05780 PF00083 Sugar (and other) transporter AVS55_RS05780 PF07690 Major Facilitator Superfamily AVS55_RS05790 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS55_RS05795 PF00510 Cytochrome c oxidase subunit III AVS55_RS05800 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVS55_RS05805 PF02104 SURF1 family AVS55_RS05830 PF13411 MerR HTH family regulatory protein AVS55_RS05835 PF00403 Heavy-metal-associated domain AVS55_RS05855 PF06968 Biotin and Thiamin Synthesis associated domain AVS55_RS05855 PF04055 Radical SAM superfamily AVS55_RS05870 PF08534 Redoxin AVS55_RS05880 PF01738 Dienelactone hydrolase family AVS55_RS05890 PF01967 MoaC family AVS55_RS05900 PF02391 MoaE protein AVS55_RS05905 PF00994 Probable molybdopterin binding domain AVS55_RS05910 PF03453 MoeA N-terminal region (domain I and II) AVS55_RS05910 PF03454 MoeA C-terminal region (domain IV) AVS55_RS05910 PF00994 Probable molybdopterin binding domain AVS55_RS05915 PF04055 Radical SAM superfamily AVS55_RS05915 PF06463 Molybdenum Cofactor Synthesis C AVS55_RS05935 PF14698 Argininosuccinate lyase C-terminal AVS55_RS05935 PF00206 Lyase AVS55_RS05940 PF00924 Mechanosensitive ion channel AVS55_RS05945 PF02540 NAD synthase AVS55_RS05945 PF00795 Carbon-nitrogen hydrolase AVS55_RS05950 PF00543 Nitrogen regulatory protein P-II AVS55_RS05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05975 PF03466 LysR substrate binding domain AVS55_RS05985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS05990 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05995 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05995 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS55_RS06000 PF03193 RsgA GTPase AVS55_RS06005 PF01435 Peptidase family M48 AVS55_RS06010 PF00929 Exonuclease AVS55_RS06015 PF03853 YjeF-related protein N-terminus AVS55_RS06020 PF08223 PaaX-like protein C-terminal domain AVS55_RS06020 PF07848 PaaX-like protein AVS55_RS06025 PF05138 Phenylacetic acid catabolic protein AVS55_RS06030 PF06243 Phenylacetic acid degradation B AVS55_RS06035 PF05138 Phenylacetic acid catabolic protein AVS55_RS06040 PF01883 Iron-sulfur cluster assembly protein AVS55_RS06045 PF00970 Oxidoreductase FAD-binding domain AVS55_RS06045 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS06045 PF00175 Oxidoreductase NAD-binding domain AVS55_RS06055 PF00171 Aldehyde dehydrogenase family AVS55_RS06060 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS06065 PF03061 Thioesterase superfamily AVS55_RS06070 PF14535 AMP-binding enzyme C-terminal domain AVS55_RS06070 PF00501 AMP-binding enzyme AVS55_RS06075 PF16970 Type-1 fimbrial protein, A AVS55_RS06095 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS06100 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS55_RS06100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS06105 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS55_RS06110 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AVS55_RS06110 PF02769 AIR synthase related protein, C-terminal domain AVS55_RS06110 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVS55_RS06115 PF05860 haemagglutination activity domain AVS55_RS06115 PF13332 Hemagglutinin repeat AVS55_RS06115 PF05594 Haemagluttinin repeat AVS55_RS06115 PF13018 Extended Signal Peptide of Type V secretion system AVS55_RS06140 PF00596 Class II Aldolase and Adducin N-terminal domain AVS55_RS06145 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS06150 PF01242 6-pyruvoyl tetrahydropterin synthase AVS55_RS06160 PF00472 RF-1 domain AVS55_RS06180 PF00701 Dihydrodipicolinate synthetase family AVS55_RS06185 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06210 PF00890 FAD binding domain AVS55_RS06210 PF14537 Cytochrome c3 AVS55_RS06215 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06230 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVS55_RS06230 PF01266 FAD dependent oxidoreductase AVS55_RS06235 PF00455 DeoR C terminal sensor domain AVS55_RS06235 PF08220 DeoR-like helix-turn-helix domain AVS55_RS06240 PF17912 MalK OB fold domain AVS55_RS06240 PF00005 ABC transporter AVS55_RS06245 PF00005 ABC transporter AVS55_RS06245 PF17912 MalK OB fold domain AVS55_RS06255 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06280 PF01037 Lrp/AsnC ligand binding domain AVS55_RS06285 PF01266 FAD dependent oxidoreductase AVS55_RS06290 PF12320 Type 5 capsule protein repressor C-terminal domain AVS55_RS06290 PF00149 Calcineurin-like phosphoesterase AVS55_RS06330 PF00478 IMP dehydrogenase / GMP reductase domain AVS55_RS06330 PF00571 CBS domain AVS55_RS06335 PF00958 GMP synthase C terminal domain AVS55_RS06335 PF02540 NAD synthase AVS55_RS06335 PF00117 Glutamine amidotransferase class-I AVS55_RS06350 PF07804 HipA-like C-terminal domain AVS55_RS06350 PF13657 HipA N-terminal domain AVS55_RS06360 PF07690 Major Facilitator Superfamily AVS55_RS06375 PF01979 Amidohydrolase family AVS55_RS06385 PF00005 ABC transporter AVS55_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06415 PF01965 DJ-1/PfpI family AVS55_RS06425 PF01740 STAS domain AVS55_RS06425 PF00916 Sulfate permease family AVS55_RS06430 PF00753 Metallo-beta-lactamase superfamily AVS55_RS06430 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVS55_RS06430 PF10996 Beta-Casp domain AVS55_RS06450 PF12706 Beta-lactamase superfamily domain AVS55_RS06455 PF01965 DJ-1/PfpI family AVS55_RS06455 PF12833 Helix-turn-helix domain AVS55_RS06460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS06460 PF03466 LysR substrate binding domain AVS55_RS06475 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS06475 PF00107 Zinc-binding dehydrogenase AVS55_RS06480 PF07690 Major Facilitator Superfamily AVS55_RS06485 PF00155 Aminotransferase class I and II AVS55_RS06485 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS06495 PF01810 LysE type translocator AVS55_RS06505 PF07687 Peptidase dimerisation domain AVS55_RS06505 PF01546 Peptidase family M20/M25/M40 AVS55_RS06510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06520 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06520 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS55_RS06525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS06525 PF00005 ABC transporter AVS55_RS06530 PF00356 Bacterial regulatory proteins, lacI family AVS55_RS06560 PF09335 SNARE associated Golgi protein AVS55_RS06575 PF13847 Methyltransferase domain AVS55_RS06590 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS06590 PF00155 Aminotransferase class I and II AVS55_RS06600 PF00692 dUTPase AVS55_RS06615 PF01632 Ribosomal protein L35 AVS55_RS06620 PF00453 Ribosomal protein L20 AVS55_RS06625 PF01409 tRNA synthetases class II core domain (F) AVS55_RS06625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVS55_RS06630 PF03483 B3/4 domain AVS55_RS06630 PF03484 tRNA synthetase B5 domain AVS55_RS06630 PF03147 Ferredoxin-fold anticodon binding domain AVS55_RS06630 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVS55_RS06630 PF01588 Putative tRNA binding domain AVS55_RS06635 PF00216 Bacterial DNA-binding protein AVS55_RS06685 PF04231 Endonuclease I AVS55_RS06705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS55_RS06705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS55_RS06710 PF04381 Putative exonuclease, RdgC AVS55_RS06720 PF02515 CoA-transferase family III AVS55_RS06725 PF03466 LysR substrate binding domain AVS55_RS06725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS06745 PF00106 short chain dehydrogenase AVS55_RS06755 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06760 PF08402 TOBE domain AVS55_RS06760 PF00005 ABC transporter AVS55_RS06765 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS06765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS06765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS06770 PF08946 Osmosensory transporter coiled coil AVS55_RS06770 PF00083 Sugar (and other) transporter AVS55_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS06775 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS06780 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS06780 PF00072 Response regulator receiver domain AVS55_RS06785 PF00154 recA bacterial DNA recombination protein AVS55_RS06790 PF02631 RecX family AVS55_RS06795 PF03466 LysR substrate binding domain AVS55_RS06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS06800 PF08267 Cobalamin-independent synthase, N-terminal domain AVS55_RS06800 PF01717 Cobalamin-independent synthase, Catalytic domain AVS55_RS06810 PF08442 ATP-grasp domain AVS55_RS06810 PF00549 CoA-ligase AVS55_RS06815 PF00549 CoA-ligase AVS55_RS06815 PF02629 CoA binding domain AVS55_RS06820 PF03741 Integral membrane protein TerC family AVS55_RS06825 PF03741 Integral membrane protein TerC family AVS55_RS06830 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVS55_RS06830 PF03900 Porphobilinogen deaminase, C-terminal domain AVS55_RS06850 PF00719 Inorganic pyrophosphatase AVS55_RS06855 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS55_RS06890 PF04972 BON domain AVS55_RS06890 PF00263 Bacterial type II and III secretion system protein AVS55_RS06890 PF13629 Pilus formation protein N terminal region AVS55_RS06895 PF00437 Type II/IV secretion system protein AVS55_RS06915 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVS55_RS06920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVS55_RS06925 PF02615 Malate/L-lactate dehydrogenase AVS55_RS06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS06930 PF03466 LysR substrate binding domain AVS55_RS06940 PF01266 FAD dependent oxidoreductase AVS55_RS06945 PF04267 Sarcosine oxidase, delta subunit family AVS55_RS06950 PF01571 Aminomethyltransferase folate-binding domain AVS55_RS06950 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVS55_RS06950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS06950 PF17806 Sarcosine oxidase A3 domain AVS55_RS06960 PF00551 Formyl transferase AVS55_RS06965 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06975 PF00561 alpha/beta hydrolase fold AVS55_RS06985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVS55_RS06985 PF01565 FAD binding domain AVS55_RS06990 PF01113 Dihydrodipicolinate reductase, N-terminus AVS55_RS06990 PF05173 Dihydrodipicolinate reductase, C-terminus AVS55_RS06995 PF04355 SmpA / OmlA family AVS55_RS07000 PF01475 Ferric uptake regulator family AVS55_RS07005 PF02463 RecF/RecN/SMC N terminal domain AVS55_RS07010 PF01513 ATP-NAD kinase AVS55_RS07015 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AVS55_RS07015 PF01628 HrcA protein C terminal domain AVS55_RS07020 PF00762 Ferrochelatase AVS55_RS07030 PF01025 GrpE AVS55_RS07040 PF00012 Hsp70 protein AVS55_RS07045 PF01556 DnaJ C terminal domain AVS55_RS07045 PF00684 DnaJ central domain AVS55_RS07045 PF00226 DnaJ domain AVS55_RS07050 PF05193 Peptidase M16 inactive domain AVS55_RS07050 PF00675 Insulinase (Peptidase family M16) AVS55_RS07070 PF01434 Peptidase family M41 AVS55_RS07070 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS07070 PF17862 AAA+ lid domain AVS55_RS07080 PF00034 Cytochrome c AVS55_RS07095 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS55_RS07115 PF00072 Response regulator receiver domain AVS55_RS07115 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS07125 PF02669 K+-transporting ATPase, c chain AVS55_RS07135 PF03814 Potassium-transporting ATPase A subunit AVS55_RS07150 PF00474 Sodium:solute symporter family AVS55_RS07165 PF00893 Small Multidrug Resistance protein AVS55_RS07170 PF01713 Smr domain AVS55_RS07170 PF00488 MutS domain V AVS55_RS07175 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS07180 PF01580 FtsK/SpoIIIE family AVS55_RS07180 PF09397 Ftsk gamma domain AVS55_RS07180 PF17854 FtsK alpha domain AVS55_RS07180 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVS55_RS07185 PF03548 Outer membrane lipoprotein carrier protein LolA AVS55_RS07190 PF12002 MgsA AAA+ ATPase C terminal AVS55_RS07190 PF16193 AAA C-terminal domain AVS55_RS07190 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS07195 PF02403 Seryl-tRNA synthetase N-terminal domain AVS55_RS07195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS55_RS07220 PF17151 Periplasmic sensor domain AVS55_RS07220 PF00990 Diguanylate cyclase, GGDEF domain AVS55_RS07235 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS07235 PF07660 Secretin and TonB N terminus short domain AVS55_RS07235 PF00593 TonB dependent receptor AVS55_RS07240 PF07690 Major Facilitator Superfamily AVS55_RS07260 PF04183 IucA / IucC family AVS55_RS07260 PF06276 Ferric iron reductase FhuF-like transporter AVS55_RS07270 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AVS55_RS07280 PF02254 TrkA-N domain AVS55_RS07280 PF00999 Sodium/hydrogen exchanger family AVS55_RS07285 PF00106 short chain dehydrogenase AVS55_RS07295 PF03883 Peroxide stress protein YaaA AVS55_RS07305 PF12805 FUSC-like inner membrane protein yccS AVS55_RS07310 PF01510 N-acetylmuramoyl-L-alanine amidase AVS55_RS07320 PF02545 Maf-like protein AVS55_RS07325 PF02620 Large ribosomal RNA subunit accumulation protein YceD AVS55_RS07330 PF01783 Ribosomal L32p protein family AVS55_RS07335 PF02504 Fatty acid synthesis protein AVS55_RS07340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVS55_RS07340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVS55_RS07345 PF00698 Acyl transferase domain AVS55_RS07355 PF00550 Phosphopantetheine attachment site AVS55_RS07360 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS55_RS07360 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS55_RS07370 PF08281 Sigma-70, region 4 AVS55_RS07370 PF04542 Sigma-70 region 2 AVS55_RS07385 PF13180 PDZ domain AVS55_RS07390 PF06421 GTP-binding protein LepA C-terminus AVS55_RS07390 PF03144 Elongation factor Tu domain 2 AVS55_RS07390 PF00009 Elongation factor Tu GTP binding domain AVS55_RS07390 PF00679 Elongation factor G C-terminus AVS55_RS07395 PF10502 Signal peptidase, peptidase S26 AVS55_RS07400 PF00035 Double-stranded RNA binding motif AVS55_RS07400 PF14622 Ribonuclease-III-like AVS55_RS07405 PF01926 50S ribosome-binding GTPase AVS55_RS07405 PF07650 KH domain AVS55_RS07410 PF02565 Recombination protein O C terminal AVS55_RS07410 PF11967 Recombination protein O N terminal AVS55_RS07420 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS07430 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS07435 PF01027 Inhibitor of apoptosis-promoting Bax1 AVS55_RS07445 PF04364 DNA polymerase III chi subunit, HolC AVS55_RS07450 PF00883 Cytosol aminopeptidase family, catalytic domain AVS55_RS07450 PF02789 Cytosol aminopeptidase family, N-terminal domain AVS55_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS07460 PF03466 LysR substrate binding domain AVS55_RS07470 PF00171 Aldehyde dehydrogenase family AVS55_RS07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS07475 PF03466 LysR substrate binding domain AVS55_RS07490 PF00877 NlpC/P60 family AVS55_RS07495 PF00501 AMP-binding enzyme AVS55_RS07495 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS55_RS07495 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS07500 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS07500 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS55_RS07500 PF00501 AMP-binding enzyme AVS55_RS07505 PF03928 Haem-degrading AVS55_RS07515 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS07515 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS55_RS07515 PF00501 AMP-binding enzyme AVS55_RS07520 PF00892 EamA-like transporter family AVS55_RS07525 PF01212 Beta-eliminating lyase AVS55_RS07540 PF16363 GDP-mannose 4,6 dehydratase AVS55_RS07560 PF01144 Coenzyme A transferase AVS55_RS07570 PF01112 Asparaginase AVS55_RS07575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS07575 PF00005 ABC transporter AVS55_RS07580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS07585 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS07590 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS55_RS07595 PF03576 Peptidase family S58 AVS55_RS07605 PF00557 Metallopeptidase family M24 AVS55_RS07605 PF01321 Creatinase/Prolidase N-terminal domain AVS55_RS07615 PF00117 Glutamine amidotransferase class-I AVS55_RS07615 PF06418 CTP synthase N-terminus AVS55_RS07620 PF00793 DAHP synthetase I family AVS55_RS07630 PF00113 Enolase, C-terminal TIM barrel domain AVS55_RS07630 PF03952 Enolase, N-terminal domain AVS55_RS07635 PF04977 Septum formation initiator AVS55_RS07640 PF00211 Adenylate and Guanylate cyclase catalytic domain AVS55_RS07665 PF01430 Hsp33 protein AVS55_RS07675 PF00501 AMP-binding enzyme AVS55_RS07675 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS55_RS07675 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS07695 PF02926 THUMP domain AVS55_RS07695 PF01170 Putative RNA methylase family UPF0020 AVS55_RS07700 PF03653 Uncharacterised protein family (UPF0093) AVS55_RS07705 PF03972 MmgE/PrpD family AVS55_RS07710 PF04303 PrpF protein AVS55_RS07715 PF00330 Aconitase family (aconitate hydratase) AVS55_RS07715 PF00694 Aconitase C-terminal domain AVS55_RS07720 PF00285 Citrate synthase, C-terminal domain AVS55_RS07730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVS55_RS07730 PF00056 lactate/malate dehydrogenase, NAD binding domain AVS55_RS07735 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS07735 PF07702 UTRA domain AVS55_RS07740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVS55_RS07745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVS55_RS07750 PF00890 FAD binding domain AVS55_RS07750 PF02910 Fumarate reductase flavoprotein C-term AVS55_RS07755 PF13085 2Fe-2S iron-sulfur cluster binding domain AVS55_RS07760 PF03937 Flavinator of succinate dehydrogenase AVS55_RS07765 PF00285 Citrate synthase, C-terminal domain AVS55_RS07785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS07785 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS55_RS07795 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS07815 PF13416 Bacterial extracellular solute-binding protein AVS55_RS07820 PF08402 TOBE domain AVS55_RS07820 PF00005 ABC transporter AVS55_RS07825 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS07830 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS07840 PF02245 Methylpurine-DNA glycosylase (MPG) AVS55_RS07850 PF02646 RmuC family AVS55_RS07855 PF18158 Adaptive response protein AidB N-terminal domain AVS55_RS07855 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS07855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS07860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVS55_RS07865 PF01895 PhoU domain AVS55_RS07870 PF04185 Phosphoesterase family AVS55_RS07870 PF05506 Domain of unknown function (DUF756) AVS55_RS07875 PF04362 Bacterial Fe(2+) trafficking AVS55_RS07880 PF00696 Amino acid kinase family AVS55_RS07880 PF00583 Acetyltransferase (GNAT) family AVS55_RS07885 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AVS55_RS07885 PF00270 DEAD/DEAH box helicase AVS55_RS07885 PF11898 Domain of unknown function (DUF3418) AVS55_RS07885 PF00271 Helicase conserved C-terminal domain AVS55_RS07885 PF04408 Helicase associated domain (HA2) AVS55_RS07895 PF01336 OB-fold nucleic acid binding domain AVS55_RS07895 PF02811 PHP domain AVS55_RS07895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVS55_RS07895 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVS55_RS07895 PF14579 Helix-hairpin-helix motif AVS55_RS07900 PF13439 Glycosyltransferase Family 4 AVS55_RS07900 PF00534 Glycosyl transferases group 1 AVS55_RS07905 PF01522 Polysaccharide deacetylase AVS55_RS07910 PF00535 Glycosyl transferase family 2 AVS55_RS07915 PF00534 Glycosyl transferases group 1 AVS55_RS07915 PF13439 Glycosyltransferase Family 4 AVS55_RS07920 PF00884 Sulfatase AVS55_RS07935 PF03692 Putative zinc- or iron-chelating domain AVS55_RS07945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS55_RS07950 PF00664 ABC transporter transmembrane region AVS55_RS07950 PF00005 ABC transporter AVS55_RS07955 PF07690 Major Facilitator Superfamily AVS55_RS07965 PF01842 ACT domain AVS55_RS07965 PF00800 Prephenate dehydratase AVS55_RS07970 PF10150 Ribonuclease E/G family AVS55_RS07970 PF00575 S1 RNA binding domain AVS55_RS08010 PF03212 Pertactin AVS55_RS08010 PF03797 Autotransporter beta-domain AVS55_RS08015 PF02545 Maf-like protein AVS55_RS08020 PF02590 Predicted SPOUT methyltransferase AVS55_RS08030 PF01467 Cytidylyltransferase-like AVS55_RS08035 PF01218 Coproporphyrinogen III oxidase AVS55_RS08040 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVS55_RS08040 PF02844 Phosphoribosylglycinamide synthetase, N domain AVS55_RS08040 PF02843 Phosphoribosylglycinamide synthetase, C domain AVS55_RS08045 PF01709 Transcriptional regulator AVS55_RS08050 PF05872 Bacterial protein of unknown function (DUF853) AVS55_RS08055 PF01235 Sodium:alanine symporter family AVS55_RS08060 PF00202 Aminotransferase class-III AVS55_RS08065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS08070 PF00171 Aldehyde dehydrogenase family AVS55_RS08080 PF07687 Peptidase dimerisation domain AVS55_RS08080 PF01546 Peptidase family M20/M25/M40 AVS55_RS08085 PF00850 Histone deacetylase domain AVS55_RS08090 PF07883 Cupin domain AVS55_RS08095 PF00202 Aminotransferase class-III AVS55_RS08105 PF00005 ABC transporter AVS55_RS08105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS08110 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS08110 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS55_RS08115 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS08120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS08125 PF00155 Aminotransferase class I and II AVS55_RS08125 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS08130 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS55_RS08135 PF07690 Major Facilitator Superfamily AVS55_RS08140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS55_RS08140 PF00529 HlyD membrane-fusion protein of T1SS AVS55_RS08150 PF01047 MarR family AVS55_RS08160 PF00892 EamA-like transporter family AVS55_RS08165 PF00107 Zinc-binding dehydrogenase AVS55_RS08165 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS08170 PF01435 Peptidase family M48 AVS55_RS08180 PF00581 Rhodanese-like domain AVS55_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS08190 PF03466 LysR substrate binding domain AVS55_RS08195 PF08402 TOBE domain AVS55_RS08195 PF00005 ABC transporter AVS55_RS08200 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS08205 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS08215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS08235 PF00860 Permease family AVS55_RS08240 PF02203 Tar ligand binding domain homologue AVS55_RS08240 PF00672 HAMP domain AVS55_RS08240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS08245 PF01272 Transcription elongation factor, GreA/GreB, C-term AVS55_RS08245 PF03449 Transcription elongation factor, N-terminal AVS55_RS08275 PF00771 FHIPEP family AVS55_RS08340 PF01514 Secretory protein of YscJ/FliF family AVS55_RS08350 PF02108 Flagellar assembly protein FliH AVS55_RS08355 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS55_RS08355 PF18269 T3SS EscN ATPase C-terminal domain AVS55_RS08355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS08370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS55_RS08375 PF00813 FliP family AVS55_RS08380 PF01313 Bacterial export proteins, family 3 AVS55_RS08385 PF01311 Bacterial export proteins, family 1 AVS55_RS08390 PF01312 FlhB HrpN YscU SpaS Family AVS55_RS08400 PF03958 Bacterial type II/III secretion system short domain AVS55_RS08400 PF00263 Bacterial type II and III secretion system protein AVS55_RS08405 PF08281 Sigma-70, region 4 AVS55_RS08405 PF04542 Sigma-70 region 2 AVS55_RS08430 PF00672 HAMP domain AVS55_RS08430 PF07228 Stage II sporulation protein E (SpoIIE) AVS55_RS08440 PF01168 Alanine racemase, N-terminal domain AVS55_RS08440 PF00842 Alanine racemase, C-terminal domain AVS55_RS08445 PF13581 Histidine kinase-like ATPase domain AVS55_RS08450 PF01740 STAS domain AVS55_RS08455 PF13091 PLD-like domain AVS55_RS08455 PF13396 Phospholipase_D-nuclease N-terminal AVS55_RS08465 PF03797 Autotransporter beta-domain AVS55_RS08485 PF16868 NMT1-like family AVS55_RS08490 PF00202 Aminotransferase class-III AVS55_RS08500 PF12802 MarR family AVS55_RS08505 PF00583 Acetyltransferase (GNAT) family AVS55_RS08515 PF01205 Uncharacterized protein family UPF0029 AVS55_RS08520 PF00085 Thioredoxin AVS55_RS08530 PF00860 Permease family AVS55_RS08535 PF00814 Glycoprotease family AVS55_RS08545 PF02660 Glycerol-3-phosphate acyltransferase AVS55_RS08550 PF01975 Survival protein SurE AVS55_RS08560 PF01551 Peptidase family M23 AVS55_RS08560 PF01476 LysM domain AVS55_RS08580 PF05958 tRNA (Uracil-5-)-methyltransferase AVS55_RS08585 PF09278 MerR, DNA binding AVS55_RS08585 PF00376 MerR family regulatory protein AVS55_RS08595 PF00462 Glutaredoxin AVS55_RS08595 PF08534 Redoxin AVS55_RS08600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS08600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS08605 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AVS55_RS08610 PF03009 Glycerophosphoryl diester phosphodiesterase family AVS55_RS08615 PF13145 PPIC-type PPIASE domain AVS55_RS08620 PF13472 GDSL-like Lipase/Acylhydrolase family AVS55_RS08625 PF00005 ABC transporter AVS55_RS08640 PF04972 BON domain AVS55_RS08650 PF05532 CsbD-like AVS55_RS08655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS08655 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS08655 PF08245 Mur ligase middle domain AVS55_RS08660 PF08443 RimK-like ATP-grasp domain AVS55_RS08660 PF08245 Mur ligase middle domain AVS55_RS08660 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS08680 PF04305 Protein of unknown function (DUF455) AVS55_RS08685 PF13406 Transglycosylase SLT domain AVS55_RS08705 PF01037 Lrp/AsnC ligand binding domain AVS55_RS08715 PF02441 Flavoprotein AVS55_RS08715 PF04127 DNA / pantothenate metabolism flavoprotein AVS55_RS08720 PF01252 Signal peptidase (SPase) II AVS55_RS08725 PF06827 Zinc finger found in FPG and IleRS AVS55_RS08725 PF00133 tRNA synthetases class I (I, L, M and V) AVS55_RS08725 PF08264 Anticodon-binding domain of tRNA AVS55_RS08730 PF01687 Riboflavin kinase AVS55_RS08730 PF06574 FAD synthetase AVS55_RS08735 PF00551 Formyl transferase AVS55_RS08755 PF13361 UvrD-like helicase C-terminal domain AVS55_RS08755 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS08760 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS08765 PF12848 ABC transporter AVS55_RS08765 PF00005 ABC transporter AVS55_RS08770 PF05175 Methyltransferase small domain AVS55_RS08775 PF07687 Peptidase dimerisation domain AVS55_RS08775 PF01546 Peptidase family M20/M25/M40 AVS55_RS08780 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVS55_RS08780 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS08780 PF14602 Hexapeptide repeat of succinyl-transferase AVS55_RS08815 PF00313 'Cold-shock' DNA-binding domain AVS55_RS08830 PF03350 Uncharacterized protein family, UPF0114 AVS55_RS08835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVS55_RS08835 PF05698 Bacterial trigger factor protein (TF) C-terminus AVS55_RS08835 PF05697 Bacterial trigger factor protein (TF) AVS55_RS08840 PF00574 Clp protease AVS55_RS08845 PF07724 AAA domain (Cdc48 subfamily) AVS55_RS08845 PF10431 C-terminal, D2-small domain, of ClpB protein AVS55_RS08845 PF06689 ClpX C4-type zinc finger AVS55_RS08850 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVS55_RS08850 PF05362 Lon protease (S16) C-terminal proteolytic domain AVS55_RS08850 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS08855 PF03466 LysR substrate binding domain AVS55_RS08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS08860 PF02515 CoA-transferase family III AVS55_RS08865 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS08870 PF01575 MaoC like domain AVS55_RS08875 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS08885 PF02803 Thiolase, C-terminal domain AVS55_RS08885 PF00108 Thiolase, N-terminal domain AVS55_RS08895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS08895 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS08895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS08905 PF01144 Coenzyme A transferase AVS55_RS08910 PF01144 Coenzyme A transferase AVS55_RS08915 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS08940 PF03797 Autotransporter beta-domain AVS55_RS08940 PF03212 Pertactin AVS55_RS08945 PF01726 LexA DNA binding domain AVS55_RS08945 PF00717 Peptidase S24-like AVS55_RS08950 PF00155 Aminotransferase class I and II AVS55_RS08955 PF04851 Type III restriction enzyme, res subunit AVS55_RS08955 PF00271 Helicase conserved C-terminal domain AVS55_RS08955 PF12344 Ultra-violet resistance protein B AVS55_RS08955 PF02151 UvrB/uvrC motif AVS55_RS08955 PF17757 UvrB interaction domain AVS55_RS08960 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVS55_RS08965 PF02082 Transcriptional regulator AVS55_RS08970 PF00266 Aminotransferase class-V AVS55_RS08975 PF01592 NifU-like N terminal domain AVS55_RS08980 PF01521 Iron-sulphur cluster biosynthesis AVS55_RS08985 PF07743 HSCB C-terminal oligomerisation domain AVS55_RS08990 PF00012 Hsp70 protein AVS55_RS08995 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS09000 PF04384 Iron-sulphur cluster assembly AVS55_RS09005 PF02142 MGS-like domain AVS55_RS09015 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS09025 PF03812 2-keto-3-deoxygluconate permease AVS55_RS09030 PF07005 Sugar-binding N-terminal domain AVS55_RS09030 PF17042 Nucleotide-binding C-terminal domain AVS55_RS09035 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVS55_RS09050 PF02261 Aspartate decarboxylase AVS55_RS09055 PF00970 Oxidoreductase FAD-binding domain AVS55_RS09055 PF00175 Oxidoreductase NAD-binding domain AVS55_RS09055 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS09060 PF01266 FAD dependent oxidoreductase AVS55_RS09065 PF13416 Bacterial extracellular solute-binding protein AVS55_RS09070 PF03466 LysR substrate binding domain AVS55_RS09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS09085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS09090 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS09095 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS09100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS09100 PF00005 ABC transporter AVS55_RS09105 PF01425 Amidase AVS55_RS09150 PF01411 tRNA synthetases class II (A) AVS55_RS09150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVS55_RS09150 PF02272 DHHA1 domain AVS55_RS09155 PF01206 Sulfurtransferase TusA AVS55_RS09165 PF00886 Ribosomal protein S16 AVS55_RS09170 PF01782 RimM N-terminal domain AVS55_RS09175 PF01746 tRNA (Guanine-1)-methyltransferase AVS55_RS09180 PF00266 Aminotransferase class-V AVS55_RS09200 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS09200 PF08521 Two-component sensor kinase N-terminal AVS55_RS09205 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS09205 PF00072 Response regulator receiver domain AVS55_RS09215 PF08264 Anticodon-binding domain of tRNA AVS55_RS09215 PF00133 tRNA synthetases class I (I, L, M and V) AVS55_RS09215 PF10458 Valyl tRNA synthetase tRNA binding arm AVS55_RS09220 PF00334 Nucleoside diphosphate kinase AVS55_RS09225 PF04055 Radical SAM superfamily AVS55_RS09235 PF04551 GcpE protein AVS55_RS09240 PF03129 Anticodon binding domain AVS55_RS09240 PF13393 Histidyl-tRNA synthetase AVS55_RS09245 PF09976 Tetratricopeptide repeat-like domain AVS55_RS09250 PF13360 PQQ-like domain AVS55_RS09255 PF01926 50S ribosome-binding GTPase AVS55_RS09255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVS55_RS09260 PF00155 Aminotransferase class I and II AVS55_RS09265 PF17209 Hfq protein AVS55_RS09270 PF13167 GTP-binding GTPase N-terminal AVS55_RS09270 PF01926 50S ribosome-binding GTPase AVS55_RS09270 PF16360 GTP-binding GTPase Middle Region AVS55_RS09275 PF12221 Bacterial membrane protein N terminal AVS55_RS09275 PF01145 SPFH domain / Band 7 family AVS55_RS09280 PF01145 SPFH domain / Band 7 family AVS55_RS09285 PF13393 Histidyl-tRNA synthetase AVS55_RS09290 PF00709 Adenylosuccinate synthetase AVS55_RS09295 PF00156 Phosphoribosyl transferase domain AVS55_RS09300 PF01165 Ribosomal protein S21 AVS55_RS09305 PF08275 DNA primase catalytic core, N-terminal domain AVS55_RS09305 PF08278 DNA primase DnaG DnaB-binding AVS55_RS09305 PF10410 DnaB-helicase binding domain of primase AVS55_RS09305 PF01807 CHC2 zinc finger AVS55_RS09310 PF04546 Sigma-70, non-essential region AVS55_RS09310 PF04542 Sigma-70 region 2 AVS55_RS09310 PF00140 Sigma-70 factor, region 1.2 AVS55_RS09310 PF04539 Sigma-70 region 3 AVS55_RS09310 PF04545 Sigma-70, region 4 AVS55_RS09310 PF03979 Sigma-70 factor, region 1.1 AVS55_RS09345 PF01594 AI-2E family transporter AVS55_RS09350 PF01061 ABC-2 type transporter AVS55_RS09355 PF00005 ABC transporter AVS55_RS09380 PF13746 4Fe-4S dicluster domain AVS55_RS09380 PF12801 4Fe-4S binding domain AVS55_RS09380 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVS55_RS09385 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVS55_RS09385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS09420 PF00202 Aminotransferase class-III AVS55_RS09425 PF00155 Aminotransferase class I and II AVS55_RS09435 PF13649 Methyltransferase domain AVS55_RS09440 PF03788 LrgA family AVS55_RS09455 PF00158 Sigma-54 interaction domain AVS55_RS09455 PF02954 Bacterial regulatory protein, Fis family AVS55_RS09455 PF01590 GAF domain AVS55_RS09460 PF00171 Aldehyde dehydrogenase family AVS55_RS09475 PF04286 Protein of unknown function (DUF445) AVS55_RS09480 PF03466 LysR substrate binding domain AVS55_RS09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS09485 PF02567 Phenazine biosynthesis-like protein AVS55_RS09490 PF07237 Protein of unknown function (DUF1428) AVS55_RS09495 PF12833 Helix-turn-helix domain AVS55_RS09495 PF02805 Metal binding domain of Ada AVS55_RS09505 PF03625 Domain of unknown function DUF302 AVS55_RS09505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVS55_RS09525 PF00916 Sulfate permease family AVS55_RS09525 PF01740 STAS domain AVS55_RS09540 PF02535 ZIP Zinc transporter AVS55_RS09550 PF00664 ABC transporter transmembrane region AVS55_RS09550 PF00005 ABC transporter AVS55_RS09560 PF00583 Acetyltransferase (GNAT) family AVS55_RS09575 PF07690 Major Facilitator Superfamily AVS55_RS09595 PF12833 Helix-turn-helix domain AVS55_RS09595 PF06719 AraC-type transcriptional regulator N-terminus AVS55_RS09605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS55_RS09610 PF01799 [2Fe-2S] binding domain AVS55_RS09610 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS09620 PF03466 LysR substrate binding domain AVS55_RS09645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS09645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS09675 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS09680 PF01522 Polysaccharide deacetylase AVS55_RS09690 PF01425 Amidase AVS55_RS09695 PF01425 Amidase AVS55_RS09730 PF01152 Bacterial-like globin AVS55_RS09755 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS09775 PF02803 Thiolase, C-terminal domain AVS55_RS09775 PF00108 Thiolase, N-terminal domain AVS55_RS09780 PF00501 AMP-binding enzyme AVS55_RS09780 PF14535 AMP-binding enzyme C-terminal domain AVS55_RS09785 PF07859 alpha/beta hydrolase fold AVS55_RS09790 PF02515 CoA-transferase family III AVS55_RS09795 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS09805 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS09810 PF00866 Ring hydroxylating beta subunit AVS55_RS09815 PF00355 Rieske [2Fe-2S] domain AVS55_RS09815 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS55_RS09820 PF13458 Periplasmic binding protein AVS55_RS09825 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS09830 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS09830 PF11862 Domain of unknown function (DUF3382) AVS55_RS09845 PF00463 Isocitrate lyase family AVS55_RS09850 PF14489 QueF-like protein AVS55_RS09850 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AVS55_RS09865 PF01066 CDP-alcohol phosphatidyltransferase AVS55_RS09870 PF01541 GIY-YIG catalytic domain AVS55_RS09870 PF08459 UvrC Helix-hairpin-helix N-terminal AVS55_RS09870 PF02151 UvrB/uvrC motif AVS55_RS09875 PF00933 Glycosyl hydrolase family 3 N terminal domain AVS55_RS09880 PF01648 4'-phosphopantetheinyl transferase superfamily AVS55_RS09885 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVS55_RS09890 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AVS55_RS09890 PF02321 Outer membrane efflux protein AVS55_RS09895 PF00873 AcrB/AcrD/AcrF family AVS55_RS09900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS55_RS09900 PF00529 HlyD membrane-fusion protein of T1SS AVS55_RS09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS09920 PF03459 TOBE domain AVS55_RS09925 PF00005 ABC transporter AVS55_RS09940 PF00080 Copper/zinc superoxide dismutase (SODC) AVS55_RS09945 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS09955 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS09965 PF07729 FCD domain AVS55_RS09965 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS09975 PF02803 Thiolase, C-terminal domain AVS55_RS09975 PF00108 Thiolase, N-terminal domain AVS55_RS09980 PF01361 Tautomerase enzyme AVS55_RS09985 PF00571 CBS domain AVS55_RS09985 PF00005 ABC transporter AVS55_RS09990 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10010 PF07690 Major Facilitator Superfamily AVS55_RS10015 PF00830 Ribosomal L28 family AVS55_RS10020 PF00471 Ribosomal protein L33 AVS55_RS10025 PF01740 STAS domain AVS55_RS10025 PF00916 Sulfate permease family AVS55_RS10045 PF01047 MarR family AVS55_RS10050 PF07690 Major Facilitator Superfamily AVS55_RS10055 PF00133 tRNA synthetases class I (I, L, M and V) AVS55_RS10055 PF08264 Anticodon-binding domain of tRNA AVS55_RS10055 PF13603 Leucyl-tRNA synthetase, Domain 2 AVS55_RS10055 PF09334 tRNA synthetases class I (M) AVS55_RS10070 PF00171 Aldehyde dehydrogenase family AVS55_RS10080 PF01425 Amidase AVS55_RS10085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS10085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS10130 PF03466 LysR substrate binding domain AVS55_RS10140 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVS55_RS10140 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVS55_RS10145 PF03466 LysR substrate binding domain AVS55_RS10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS10165 PF01925 Sulfite exporter TauE/SafE AVS55_RS10170 PF00892 EamA-like transporter family AVS55_RS10195 PF06434 Aconitate hydratase 2 N-terminus AVS55_RS10195 PF11791 Aconitate B N-terminal domain AVS55_RS10195 PF00330 Aconitase family (aconitate hydratase) AVS55_RS10205 PF00691 OmpA family AVS55_RS10220 PF00593 TonB dependent receptor AVS55_RS10220 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS10230 PF00694 Aconitase C-terminal domain AVS55_RS10230 PF00330 Aconitase family (aconitate hydratase) AVS55_RS10235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVS55_RS10250 PF09285 Elongation factor P, C-terminal AVS55_RS10250 PF08207 Elongation factor P (EF-P) KOW-like domain AVS55_RS10250 PF01132 Elongation factor P (EF-P) OB domain AVS55_RS10255 PF00034 Cytochrome c AVS55_RS10265 PF04542 Sigma-70 region 2 AVS55_RS10265 PF08281 Sigma-70, region 4 AVS55_RS10280 PF00158 Sigma-54 interaction domain AVS55_RS10280 PF00072 Response regulator receiver domain AVS55_RS10280 PF02954 Bacterial regulatory protein, Fis family AVS55_RS10310 PF00437 Type II/IV secretion system protein AVS55_RS10320 PF04972 BON domain AVS55_RS10320 PF00263 Bacterial type II and III secretion system protein AVS55_RS10320 PF13629 Pilus formation protein N terminal region AVS55_RS10350 PF00563 EAL domain AVS55_RS10350 PF00990 Diguanylate cyclase, GGDEF domain AVS55_RS10350 PF03707 Bacterial signalling protein N terminal repeat AVS55_RS10355 PF08479 POTRA domain, ShlB-type AVS55_RS10355 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AVS55_RS10370 PF01047 MarR family AVS55_RS10375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS10375 PF00005 ABC transporter AVS55_RS10380 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS55_RS10380 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10385 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS10400 PF01544 CorA-like Mg2+ transporter protein AVS55_RS10405 PF13361 UvrD-like helicase C-terminal domain AVS55_RS10405 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS10415 PF00155 Aminotransferase class I and II AVS55_RS10415 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS10420 PF00202 Aminotransferase class-III AVS55_RS10425 PF00171 Aldehyde dehydrogenase family AVS55_RS10430 PF00459 Inositol monophosphatase family AVS55_RS10435 PF02146 Sir2 family AVS55_RS10445 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS10450 PF00342 Phosphoglucose isomerase AVS55_RS10455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS55_RS10455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS55_RS10455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS55_RS10455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS55_RS10465 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS10465 PF00072 Response regulator receiver domain AVS55_RS10470 PF12802 MarR family AVS55_RS10490 PF01522 Polysaccharide deacetylase AVS55_RS10490 PF14883 Hypothetical glycosyl hydrolase family 13 AVS55_RS10495 PF00535 Glycosyl transferase family 2 AVS55_RS10505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS55_RS10530 PF01042 Endoribonuclease L-PSP AVS55_RS10535 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS10540 PF13380 CoA binding domain AVS55_RS10545 PF09339 IclR helix-turn-helix domain AVS55_RS10545 PF01614 Bacterial transcriptional regulator AVS55_RS10550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS55_RS10550 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS10560 PF08402 TOBE domain AVS55_RS10560 PF00005 ABC transporter AVS55_RS10565 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10570 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10590 PF03466 LysR substrate binding domain AVS55_RS10590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS10605 PF01958 Domain of unknown function DUF108 AVS55_RS10605 PF03447 Homoserine dehydrogenase, NAD binding domain AVS55_RS10610 PF00561 alpha/beta hydrolase fold AVS55_RS10615 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS10620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS10625 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS55_RS10625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS10630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS10630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS10655 PF01842 ACT domain AVS55_RS10655 PF13840 ACT domain AVS55_RS10655 PF00696 Amino acid kinase family AVS55_RS10660 PF09179 TilS substrate binding domain AVS55_RS10660 PF01171 PP-loop family AVS55_RS10670 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVS55_RS10675 PF02805 Metal binding domain of Ada AVS55_RS10675 PF06029 AlkA N-terminal domain AVS55_RS10675 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS55_RS10675 PF12833 Helix-turn-helix domain AVS55_RS10680 PF01406 tRNA synthetases class I (C) catalytic domain AVS55_RS10680 PF09190 DALR domain AVS55_RS10690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVS55_RS10695 PF00149 Calcineurin-like phosphoesterase AVS55_RS10700 PF02673 Bacitracin resistance protein BacA AVS55_RS10705 PF03741 Integral membrane protein TerC family AVS55_RS10705 PF03471 Transporter associated domain AVS55_RS10710 PF00459 Inositol monophosphatase family AVS55_RS10715 PF00588 SpoU rRNA Methylase family AVS55_RS10720 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS10730 PF05552 Conserved TM helix AVS55_RS10730 PF00924 Mechanosensitive ion channel AVS55_RS10745 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS55_RS10745 PF01968 Hydantoinase/oxoprolinase AVS55_RS10755 PF03466 LysR substrate binding domain AVS55_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS10780 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS10795 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AVS55_RS10795 PF17287 POTRA domain AVS55_RS10795 PF08479 POTRA domain, ShlB-type AVS55_RS10800 PF00419 Fimbrial protein AVS55_RS10805 PF13953 PapC C-terminal domain AVS55_RS10805 PF13954 PapC N-terminal domain AVS55_RS10805 PF00577 Outer membrane usher protein AVS55_RS10810 PF02753 Pili assembly chaperone PapD, C-terminal domain AVS55_RS10810 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AVS55_RS10815 PF16970 Type-1 fimbrial protein, A AVS55_RS10825 PF13018 Extended Signal Peptide of Type V secretion system AVS55_RS10825 PF13332 Hemagglutinin repeat AVS55_RS10825 PF05860 haemagglutination activity domain AVS55_RS10825 PF05594 Haemagluttinin repeat AVS55_RS10830 PF00072 Response regulator receiver domain AVS55_RS10830 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS10835 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS10835 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS10835 PF01627 Hpt domain AVS55_RS10835 PF00072 Response regulator receiver domain AVS55_RS10835 PF00989 PAS fold AVS55_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS10845 PF07286 Protein of unknown function (DUF1445) AVS55_RS10850 PF01425 Amidase AVS55_RS10870 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS10875 PF04343 Protein of unknown function, DUF488 AVS55_RS10885 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS10885 PF07729 FCD domain AVS55_RS10890 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS10890 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS55_RS10900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS10900 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS55_RS10910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS10910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS10910 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS10915 PF07687 Peptidase dimerisation domain AVS55_RS10915 PF01546 Peptidase family M20/M25/M40 AVS55_RS10920 PF00171 Aldehyde dehydrogenase family AVS55_RS10925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVS55_RS10925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVS55_RS10930 PF00491 Arginase family AVS55_RS10935 PF00005 ABC transporter AVS55_RS10945 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS10960 PF01026 TatD related DNase AVS55_RS10965 PF12169 DNA polymerase III subunits gamma and tau domain III AVS55_RS10970 PF02223 Thymidylate kinase AVS55_RS10975 PF02618 YceG-like family AVS55_RS10980 PF01571 Aminomethyltransferase folate-binding domain AVS55_RS10990 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVS55_RS10990 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVS55_RS10990 PF14579 Helix-hairpin-helix motif AVS55_RS10990 PF02811 PHP domain AVS55_RS10995 PF02811 PHP domain AVS55_RS10995 PF14579 Helix-hairpin-helix motif AVS55_RS10995 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVS55_RS10995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVS55_RS11000 PF01266 FAD dependent oxidoreductase AVS55_RS11005 PF02082 Transcriptional regulator AVS55_RS11010 PF00970 Oxidoreductase FAD-binding domain AVS55_RS11010 PF00042 Globin AVS55_RS11010 PF00175 Oxidoreductase NAD-binding domain AVS55_RS11040 PF00005 ABC transporter AVS55_RS11045 PF12848 ABC transporter AVS55_RS11045 PF00005 ABC transporter AVS55_RS11050 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS11060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS11065 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS11070 PF02016 LD-carboxypeptidase N-terminal domain AVS55_RS11070 PF17676 LD-carboxypeptidase C-terminal domain AVS55_RS11075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS55_RS11100 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AVS55_RS11105 PF01899 Na+/H+ ion antiporter subunit AVS55_RS11110 PF00361 Proton-conducting membrane transporter AVS55_RS11115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVS55_RS11120 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AVS55_RS11120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVS55_RS11120 PF00361 Proton-conducting membrane transporter AVS55_RS11120 PF13244 Domain of unknown function (DUF4040) AVS55_RS11125 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11140 PF03466 LysR substrate binding domain AVS55_RS11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11150 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11155 PF07969 Amidohydrolase family AVS55_RS11175 PF03358 NADPH-dependent FMN reductase AVS55_RS11200 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11205 PF03466 LysR substrate binding domain AVS55_RS11210 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11225 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS55_RS11230 PF01070 FMN-dependent dehydrogenase AVS55_RS11240 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11245 PF03466 LysR substrate binding domain AVS55_RS11250 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS55_RS11255 PF02798 Glutathione S-transferase, N-terminal domain AVS55_RS11255 PF00043 Glutathione S-transferase, C-terminal domain AVS55_RS11260 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AVS55_RS11265 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AVS55_RS11270 PF00082 Subtilase family AVS55_RS11270 PF03797 Autotransporter beta-domain AVS55_RS11270 PF12951 Passenger-associated-transport-repeat AVS55_RS11275 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS11275 PF00072 Response regulator receiver domain AVS55_RS11300 PF00884 Sulfatase AVS55_RS11335 PF17863 AAA lid domain AVS55_RS11335 PF07726 ATPase family associated with various cellular activities (AAA) AVS55_RS11350 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11360 PF03741 Integral membrane protein TerC family AVS55_RS11370 PF11862 Domain of unknown function (DUF3382) AVS55_RS11370 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS11375 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS11375 PF00005 ABC transporter AVS55_RS11380 PF00005 ABC transporter AVS55_RS11390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS11390 PF14759 Reductase C-terminal AVS55_RS11405 PF00106 short chain dehydrogenase AVS55_RS11415 PF05159 Capsule polysaccharide biosynthesis protein AVS55_RS11420 PF05159 Capsule polysaccharide biosynthesis protein AVS55_RS11425 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS11430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS55_RS11430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS55_RS11430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS55_RS11435 PF02563 Polysaccharide biosynthesis/export protein AVS55_RS11445 PF00534 Glycosyl transferases group 1 AVS55_RS11455 PF00005 ABC transporter AVS55_RS11465 PF00535 Glycosyl transferase family 2 AVS55_RS11480 PF00210 Ferritin-like domain AVS55_RS11485 PF00171 Aldehyde dehydrogenase family AVS55_RS11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11490 PF03466 LysR substrate binding domain AVS55_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11495 PF03466 LysR substrate binding domain AVS55_RS11500 PF00271 Helicase conserved C-terminal domain AVS55_RS11500 PF17191 RecG wedge domain AVS55_RS11500 PF00270 DEAD/DEAH box helicase AVS55_RS11505 PF01042 Endoribonuclease L-PSP AVS55_RS11515 PF00248 Aldo/keto reductase family AVS55_RS11525 PF03466 LysR substrate binding domain AVS55_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11530 PF00970 Oxidoreductase FAD-binding domain AVS55_RS11530 PF00175 Oxidoreductase NAD-binding domain AVS55_RS11540 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS11545 PF00005 ABC transporter AVS55_RS11545 PF08402 TOBE domain AVS55_RS11555 PF05726 Pirin C-terminal cupin domain AVS55_RS11555 PF02678 Pirin AVS55_RS11560 PF17954 Quercetinase C-terminal cupin domain AVS55_RS11560 PF02678 Pirin AVS55_RS11565 PF03466 LysR substrate binding domain AVS55_RS11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11570 PF02954 Bacterial regulatory protein, Fis family AVS55_RS11570 PF00072 Response regulator receiver domain AVS55_RS11570 PF00158 Sigma-54 interaction domain AVS55_RS11575 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS11575 PF00989 PAS fold AVS55_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS11580 PF00120 Glutamine synthetase, catalytic domain AVS55_RS11580 PF03951 Glutamine synthetase, beta-Grasp domain AVS55_RS11585 PF04055 Radical SAM superfamily AVS55_RS11585 PF06969 HemN C-terminal domain AVS55_RS11595 PF01725 Ham1 family AVS55_RS11600 PF17154 Gammaproteobacterial periplasmic sensor domain AVS55_RS11600 PF00990 Diguanylate cyclase, GGDEF domain AVS55_RS11600 PF00563 EAL domain AVS55_RS11600 PF00672 HAMP domain AVS55_RS11605 PF00672 HAMP domain AVS55_RS11605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS11605 PF02203 Tar ligand binding domain homologue AVS55_RS11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11610 PF03466 LysR substrate binding domain AVS55_RS11620 PF01138 3' exoribonuclease family, domain 1 AVS55_RS11620 PF03725 3' exoribonuclease family, domain 2 AVS55_RS11625 PF03755 YicC-like family, N-terminal region AVS55_RS11625 PF08340 Domain of unknown function (DUF1732) AVS55_RS11645 PF01048 Phosphorylase superfamily AVS55_RS11645 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AVS55_RS11650 PF00877 NlpC/P60 family AVS55_RS11660 PF00034 Cytochrome c AVS55_RS11665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS11670 PF00625 Guanylate kinase AVS55_RS11675 PF01192 RNA polymerase Rpb6 AVS55_RS11680 PF13291 ACT domain AVS55_RS11680 PF04607 Region found in RelA / SpoT proteins AVS55_RS11680 PF02824 TGS domain AVS55_RS11685 PF00005 ABC transporter AVS55_RS11690 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS11695 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS11710 PF02163 Peptidase family M50 AVS55_RS11710 PF17820 PDZ domain AVS55_RS11715 PF00701 Dihydrodipicolinate synthetase family AVS55_RS11720 PF06804 NlpB/DapX lipoprotein AVS55_RS11725 PF16970 Type-1 fimbrial protein, A AVS55_RS11730 PF08007 Cupin superfamily protein AVS55_RS11735 PF05188 MutS domain II AVS55_RS11735 PF01624 MutS domain I AVS55_RS11735 PF00488 MutS domain V AVS55_RS11735 PF05190 MutS family domain IV AVS55_RS11735 PF05192 MutS domain III AVS55_RS11740 PF07311 Dodecin AVS55_RS11745 PF03358 NADPH-dependent FMN reductase AVS55_RS11790 PF01300 Telomere recombination AVS55_RS11795 PF04228 Putative neutral zinc metallopeptidase AVS55_RS11815 PF02132 RecR protein AVS55_RS11815 PF13662 Toprim domain AVS55_RS11820 PF02575 YbaB/EbfC DNA-binding family AVS55_RS11825 PF12169 DNA polymerase III subunits gamma and tau domain III AVS55_RS11825 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AVS55_RS11825 PF12170 DNA polymerase III tau subunit V interacting with alpha AVS55_RS11840 PF13361 UvrD-like helicase C-terminal domain AVS55_RS11840 PF12705 PD-(D/E)XK nuclease superfamily AVS55_RS11840 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS11850 PF07690 Major Facilitator Superfamily AVS55_RS11860 PF00768 D-alanyl-D-alanine carboxypeptidase AVS55_RS11875 PF01174 SNO glutamine amidotransferase family AVS55_RS11880 PF04073 Aminoacyl-tRNA editing domain AVS55_RS11885 PF02899 Phage integrase, N-terminal SAM-like domain AVS55_RS11885 PF00589 Phage integrase family AVS55_RS11890 PF03466 LysR substrate binding domain AVS55_RS11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS11895 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS11895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS11900 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS11900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS11900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS11910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS11910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS11915 PF00005 ABC transporter AVS55_RS11920 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS11925 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS11930 PF00491 Arginase family AVS55_RS11935 PF01614 Bacterial transcriptional regulator AVS55_RS11935 PF09339 IclR helix-turn-helix domain AVS55_RS11940 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS11945 PF01300 Telomere recombination AVS55_RS11945 PF03481 Putative GTP-binding controlling metal-binding AVS55_RS11950 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVS55_RS11950 PF02222 ATP-grasp domain AVS55_RS11955 PF00731 AIR carboxylase AVS55_RS11960 PF02600 Disulfide bond formation protein DsbB AVS55_RS11970 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AVS55_RS11975 PF15723 Motility quorum-sensing regulator, toxin of MqsA AVS55_RS11980 PF01259 SAICAR synthetase AVS55_RS11990 PF01116 Fructose-bisphosphate aldolase class-II AVS55_RS12005 PF03069 Acetamidase/Formamidase family AVS55_RS12010 PF02293 AmiS/UreI family transporter AVS55_RS12020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS55_RS12020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS12035 PF00005 ABC transporter AVS55_RS12040 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12045 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12050 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS12060 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVS55_RS12065 PF02566 OsmC-like protein AVS55_RS12075 PF05524 PEP-utilising enzyme, N-terminal AVS55_RS12075 PF00391 PEP-utilising enzyme, mobile domain AVS55_RS12075 PF02896 PEP-utilising enzyme, TIM barrel domain AVS55_RS12080 PF00381 PTS HPr component phosphorylation site AVS55_RS12090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVS55_RS12090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVS55_RS12095 PF00707 Translation initiation factor IF-3, C-terminal domain AVS55_RS12095 PF05198 Translation initiation factor IF-3, N-terminal domain AVS55_RS12100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS55_RS12100 PF03129 Anticodon binding domain AVS55_RS12100 PF02824 TGS domain AVS55_RS12100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVS55_RS12105 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS12115 PF06969 HemN C-terminal domain AVS55_RS12115 PF04055 Radical SAM superfamily AVS55_RS12125 PF00990 Diguanylate cyclase, GGDEF domain AVS55_RS12135 PF12805 FUSC-like inner membrane protein yccS AVS55_RS12145 PF03883 Peroxide stress protein YaaA AVS55_RS12160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVS55_RS12165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS12175 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS12180 PF01416 tRNA pseudouridine synthase AVS55_RS12190 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVS55_RS12190 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVS55_RS12195 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS55_RS12200 PF00694 Aconitase C-terminal domain AVS55_RS12205 PF00330 Aconitase family (aconitate hydratase) AVS55_RS12210 PF12849 PBP superfamily domain AVS55_RS12215 PF00005 ABC transporter AVS55_RS12220 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12245 PF13247 4Fe-4S dicluster domain AVS55_RS12250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVS55_RS12250 PF01568 Molydopterin dinucleotide binding domain AVS55_RS12250 PF00384 Molybdopterin oxidoreductase AVS55_RS12280 PF10609 NUBPL iron-transfer P-loop NTPase AVS55_RS12285 PF12804 MobA-like NTP transferase domain AVS55_RS12290 PF03454 MoeA C-terminal region (domain IV) AVS55_RS12290 PF03453 MoeA N-terminal region (domain I and II) AVS55_RS12290 PF00994 Probable molybdopterin binding domain AVS55_RS12295 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AVS55_RS12300 PF01435 Peptidase family M48 AVS55_RS12305 PF01264 Chorismate synthase AVS55_RS12310 PF08448 PAS fold AVS55_RS12310 PF00990 Diguanylate cyclase, GGDEF domain AVS55_RS12310 PF08447 PAS fold AVS55_RS12310 PF00563 EAL domain AVS55_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12330 PF08402 TOBE domain AVS55_RS12330 PF00005 ABC transporter AVS55_RS12335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS12335 PF03466 LysR substrate binding domain AVS55_RS12340 PF00300 Histidine phosphatase superfamily (branch 1) AVS55_RS12350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVS55_RS12350 PF02142 MGS-like domain AVS55_RS12350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS12355 PF00117 Glutamine amidotransferase class-I AVS55_RS12355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVS55_RS12360 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVS55_RS12385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS12385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS12390 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS12395 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS12395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS12395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS12400 PF03658 RnfH family Ubiquitin AVS55_RS12405 PF03364 Polyketide cyclase / dehydrase and lipid transport AVS55_RS12415 PF01668 SmpB protein AVS55_RS12420 PF00990 Diguanylate cyclase, GGDEF domain AVS55_RS12420 PF08448 PAS fold AVS55_RS12425 PF01145 SPFH domain / Band 7 family AVS55_RS12425 PF16200 C-terminal region of band_7 AVS55_RS12440 PF00958 GMP synthase C terminal domain AVS55_RS12440 PF00117 Glutamine amidotransferase class-I AVS55_RS12445 PF00391 PEP-utilising enzyme, mobile domain AVS55_RS12445 PF02896 PEP-utilising enzyme, TIM barrel domain AVS55_RS12445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVS55_RS12450 PF03618 Kinase/pyrophosphorylase AVS55_RS12455 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVS55_RS12455 PF00588 SpoU rRNA Methylase family AVS55_RS12460 PF01351 Ribonuclease HII AVS55_RS12465 PF02684 Lipid-A-disaccharide synthetase AVS55_RS12470 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVS55_RS12470 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS12475 PF07977 FabA-like domain AVS55_RS12480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVS55_RS12480 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS12485 PF03938 Outer membrane protein (OmpH-like) AVS55_RS12490 PF07244 Surface antigen variable number repeat AVS55_RS12490 PF01103 Surface antigen AVS55_RS12495 PF17820 PDZ domain AVS55_RS12495 PF02163 Peptidase family M50 AVS55_RS12500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVS55_RS12500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVS55_RS12500 PF13288 DXP reductoisomerase C-terminal domain AVS55_RS12510 PF01255 Putative undecaprenyl diphosphate synthase AVS55_RS12515 PF01765 Ribosome recycling factor AVS55_RS12520 PF00696 Amino acid kinase family AVS55_RS12525 PF00889 Elongation factor TS AVS55_RS12530 PF00318 Ribosomal protein S2 AVS55_RS12535 PF00557 Metallopeptidase family M24 AVS55_RS12540 PF01909 Nucleotidyltransferase domain AVS55_RS12540 PF01966 HD domain AVS55_RS12540 PF08335 GlnD PII-uridylyltransferase AVS55_RS12555 PF00156 Phosphoribosyl transferase domain AVS55_RS12570 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS12570 PF08245 Mur ligase middle domain AVS55_RS12580 PF07196 Flagellin hook IN motif AVS55_RS12580 PF07195 Flagellar hook-associated protein 2 C-terminus AVS55_RS12580 PF02465 Flagellar hook-associated protein 2 N-terminus AVS55_RS12585 PF02561 Flagellar protein FliS AVS55_RS12605 PF01312 FlhB HrpN YscU SpaS Family AVS55_RS12615 PF02049 Flagellar hook-basal body complex protein FliE AVS55_RS12620 PF01514 Secretory protein of YscJ/FliF family AVS55_RS12620 PF08345 Flagellar M-ring protein C-terminal AVS55_RS12625 PF14842 FliG N-terminal domain AVS55_RS12625 PF01706 FliG C-terminal domain AVS55_RS12625 PF14841 FliG middle domain AVS55_RS12630 PF02108 Flagellar assembly protein FliH AVS55_RS12635 PF18269 T3SS EscN ATPase C-terminal domain AVS55_RS12635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS12660 PF03748 Flagellar basal body-associated protein FliL AVS55_RS12665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS55_RS12665 PF02154 Flagellar motor switch protein FliM AVS55_RS12670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS55_RS12670 PF16973 Flagellar motor switch protein FliN N-terminal AVS55_RS12675 PF04347 Flagellar biosynthesis protein, FliO AVS55_RS12680 PF00813 FliP family AVS55_RS12685 PF01313 Bacterial export proteins, family 3 AVS55_RS12690 PF01311 Bacterial export proteins, family 1 AVS55_RS12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS12700 PF08447 PAS fold AVS55_RS12705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS12705 PF02203 Tar ligand binding domain homologue AVS55_RS12705 PF00672 HAMP domain AVS55_RS12710 PF00672 HAMP domain AVS55_RS12710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS12710 PF02203 Tar ligand binding domain homologue AVS55_RS12715 PF00669 Bacterial flagellin N-terminal helical region AVS55_RS12720 PF00460 Flagella basal body rod protein AVS55_RS12720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVS55_RS12725 PF10135 Rod binding protein AVS55_RS12730 PF02119 Flagellar P-ring protein AVS55_RS12735 PF02107 Flagellar L-ring protein AVS55_RS12740 PF00460 Flagella basal body rod protein AVS55_RS12740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12745 PF00460 Flagella basal body rod protein AVS55_RS12750 PF00460 Flagella basal body rod protein AVS55_RS12750 PF07559 Flagellar basal body protein FlaE AVS55_RS12750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12755 PF03963 Flagellar hook capping protein - N-terminal region AVS55_RS12755 PF13860 FlgD Ig-like domain AVS55_RS12755 PF13861 FlgD Tudor-like domain AVS55_RS12760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12760 PF00460 Flagella basal body rod protein AVS55_RS12765 PF00460 Flagella basal body rod protein AVS55_RS12775 PF04316 Anti-sigma-28 factor, FlgM AVS55_RS12785 PF00448 SRP54-type protein, GTPase domain AVS55_RS12795 PF01312 FlhB HrpN YscU SpaS Family AVS55_RS12805 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS12810 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12815 PF00005 ABC transporter AVS55_RS12825 PF08546 Ketopantoate reductase PanE/ApbA C terminal AVS55_RS12825 PF02558 Ketopantoate reductase PanE/ApbA AVS55_RS12830 PF13378 Enolase C-terminal domain-like AVS55_RS12835 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS12845 PF00694 Aconitase C-terminal domain AVS55_RS12850 PF00356 Bacterial regulatory proteins, lacI family AVS55_RS12855 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS12860 PF02515 CoA-transferase family III AVS55_RS12870 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS12875 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS12875 PF13380 CoA binding domain AVS55_RS12880 PF07729 FCD domain AVS55_RS12880 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS12885 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS55_RS12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS12895 PF03466 LysR substrate binding domain AVS55_RS12905 PF12951 Passenger-associated-transport-repeat AVS55_RS12915 PF03551 Transcriptional regulator PadR-like family AVS55_RS12925 PF03372 Endonuclease/Exonuclease/phosphatase family AVS55_RS12930 PF13091 PLD-like domain AVS55_RS12945 PF03706 Lysylphosphatidylglycerol synthase TM region AVS55_RS12975 PF11896 Domain of unknown function (DUF3416) AVS55_RS12975 PF00128 Alpha amylase, catalytic domain AVS55_RS12980 PF00128 Alpha amylase, catalytic domain AVS55_RS12980 PF16657 Maltogenic Amylase, C-terminal domain AVS55_RS12985 PF02806 Alpha amylase, C-terminal all-beta domain AVS55_RS12985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS55_RS12985 PF00128 Alpha amylase, catalytic domain AVS55_RS12990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS55_RS12990 PF00128 Alpha amylase, catalytic domain AVS55_RS12995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS55_RS12995 PF11941 Domain of unknown function (DUF3459) AVS55_RS12995 PF00128 Alpha amylase, catalytic domain AVS55_RS13005 PF00128 Alpha amylase, catalytic domain AVS55_RS13015 PF08543 Phosphomethylpyrimidine kinase AVS55_RS13020 PF01168 Alanine racemase, N-terminal domain AVS55_RS13025 PF00155 Aminotransferase class I and II AVS55_RS13025 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS13040 PF00582 Universal stress protein family AVS55_RS13045 PF00248 Aldo/keto reductase family AVS55_RS13055 PF16485 Protealysin propeptide AVS55_RS13055 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVS55_RS13055 PF01447 Thermolysin metallopeptidase, catalytic domain AVS55_RS13060 PF07681 DoxX AVS55_RS13080 PF00578 AhpC/TSA family AVS55_RS13085 PF03960 ArsC family AVS55_RS13090 PF02515 CoA-transferase family III AVS55_RS13110 PF00255 Glutathione peroxidase AVS55_RS13115 PF02798 Glutathione S-transferase, N-terminal domain AVS55_RS13115 PF00043 Glutathione S-transferase, C-terminal domain AVS55_RS13140 PF02666 Phosphatidylserine decarboxylase AVS55_RS13145 PF01070 FMN-dependent dehydrogenase AVS55_RS13150 PF03180 NLPA lipoprotein AVS55_RS13155 PF08808 RES domain AVS55_RS13165 PF04241 Protein of unknown function (DUF423) AVS55_RS13185 PF13458 Periplasmic binding protein AVS55_RS13190 PF00005 ABC transporter AVS55_RS13190 PF17912 MalK OB fold domain AVS55_RS13195 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS13200 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS13205 PF13416 Bacterial extracellular solute-binding protein AVS55_RS13210 PF03807 NADP oxidoreductase coenzyme F420-dependent AVS55_RS13210 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVS55_RS13215 PF02592 Putative vitamin uptake transporter AVS55_RS13225 PF13458 Periplasmic binding protein AVS55_RS13230 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS13235 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS13235 PF11862 Domain of unknown function (DUF3382) AVS55_RS13240 PF00005 ABC transporter AVS55_RS13240 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS13245 PF00005 ABC transporter AVS55_RS13250 PF01177 Asp/Glu/Hydantoin racemase AVS55_RS13265 PF00892 EamA-like transporter family AVS55_RS13275 PF04235 Protein of unknown function (DUF418) AVS55_RS13280 PF00521 DNA gyrase/topoisomerase IV, subunit A AVS55_RS13290 PF00204 DNA gyrase B AVS55_RS13290 PF00986 DNA gyrase B subunit, carboxyl terminus AVS55_RS13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS13290 PF01751 Toprim domain AVS55_RS13295 PF00085 Thioredoxin AVS55_RS13300 PF07497 Rho termination factor, RNA-binding domain AVS55_RS13300 PF07498 Rho termination factor, N-terminal domain AVS55_RS13300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS13310 PF08335 GlnD PII-uridylyltransferase AVS55_RS13310 PF03710 Glutamate-ammonia ligase adenylyltransferase AVS55_RS13315 PF02677 Epoxyqueuosine reductase QueH AVS55_RS13320 PF03313 Serine dehydratase alpha chain AVS55_RS13320 PF03315 Serine dehydratase beta chain AVS55_RS13325 PF02690 Na+/Pi-cotransporter AVS55_RS13330 PF01738 Dienelactone hydrolase family AVS55_RS13340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVS55_RS13340 PF01367 5'-3' exonuclease, C-terminal SAM fold AVS55_RS13340 PF00476 DNA polymerase family A AVS55_RS13340 PF01612 3'-5' exonuclease AVS55_RS13345 PF03641 Possible lysine decarboxylase AVS55_RS13360 PF00679 Elongation factor G C-terminus AVS55_RS13360 PF03144 Elongation factor Tu domain 2 AVS55_RS13360 PF00009 Elongation factor Tu GTP binding domain AVS55_RS13365 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVS55_RS13365 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVS55_RS13370 PF02033 Ribosome-binding factor A AVS55_RS13375 PF11987 Translation-initiation factor 2 AVS55_RS13375 PF08364 Bacterial translation initiation factor IF-2 associated region AVS55_RS13375 PF04760 Translation initiation factor IF-2, N-terminal region AVS55_RS13375 PF00009 Elongation factor Tu GTP binding domain AVS55_RS13380 PF13184 NusA-like KH domain AVS55_RS13380 PF08529 NusA N-terminal domain AVS55_RS13385 PF17384 RimP C-terminal SH3 domain AVS55_RS13385 PF02576 RimP N-terminal domain AVS55_RS13390 PF00849 RNA pseudouridylate synthase AVS55_RS13390 PF01479 S4 domain AVS55_RS13395 PF04079 Segregation and condensation complex subunit ScpB AVS55_RS13405 PF03466 LysR substrate binding domain AVS55_RS13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13410 PF00881 Nitroreductase family AVS55_RS13415 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS55_RS13415 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVS55_RS13435 PF14497 Glutathione S-transferase, C-terminal domain AVS55_RS13435 PF02798 Glutathione S-transferase, N-terminal domain AVS55_RS13440 PF02401 LytB protein AVS55_RS13445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVS55_RS13450 PF04002 RadC-like JAB domain AVS55_RS13455 PF04199 Putative cyclase AVS55_RS13460 PF03301 Tryptophan 2,3-dioxygenase AVS55_RS13465 PF01197 Ribosomal protein L31 AVS55_RS13475 PF01554 MatE AVS55_RS13490 PF18073 Rubredoxin metal binding domain AVS55_RS13495 PF12034 Domain of unknown function (DUF3520) AVS55_RS13495 PF00092 von Willebrand factor type A domain AVS55_RS13495 PF12450 von Willebrand factor AVS55_RS13500 PF04542 Sigma-70 region 2 AVS55_RS13500 PF04545 Sigma-70, region 4 AVS55_RS13520 PF00842 Alanine racemase, C-terminal domain AVS55_RS13520 PF01168 Alanine racemase, N-terminal domain AVS55_RS13535 PF01593 Flavin containing amine oxidoreductase AVS55_RS13535 PF01593 Flavin containing amine oxidoreductase AVS55_RS13540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVS55_RS13550 PF01061 ABC-2 type transporter AVS55_RS13555 PF00005 ABC transporter AVS55_RS13575 PF02424 ApbE family AVS55_RS13580 PF00667 FAD binding domain AVS55_RS13580 PF00175 Oxidoreductase NAD-binding domain AVS55_RS13580 PF00258 Flavodoxin AVS55_RS13590 PF07969 Amidohydrolase family AVS55_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13595 PF03466 LysR substrate binding domain AVS55_RS13605 PF09370 Phosphoenolpyruvate hydrolase-like AVS55_RS13620 PF03212 Pertactin AVS55_RS13620 PF03797 Autotransporter beta-domain AVS55_RS13625 PF03797 Autotransporter beta-domain AVS55_RS13625 PF03212 Pertactin AVS55_RS13640 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS13640 PF07724 AAA domain (Cdc48 subfamily) AVS55_RS13640 PF17871 AAA lid domain AVS55_RS13640 PF02861 Clp amino terminal domain, pathogenicity island component AVS55_RS13640 PF10431 C-terminal, D2-small domain, of ClpB protein AVS55_RS13645 PF00027 Cyclic nucleotide-binding domain AVS55_RS13645 PF13545 Crp-like helix-turn-helix domain AVS55_RS13660 PF00293 NUDIX domain AVS55_RS13665 PF12843 Putative quorum-sensing-regulated virulence factor AVS55_RS13675 PF04542 Sigma-70 region 2 AVS55_RS13675 PF08281 Sigma-70, region 4 AVS55_RS13675 PF12680 SnoaL-like domain AVS55_RS13680 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS13710 PF00155 Aminotransferase class I and II AVS55_RS13715 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS13725 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS13730 PF00005 ABC transporter AVS55_RS13755 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS55_RS13780 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS13785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS13785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13790 PF03466 LysR substrate binding domain AVS55_RS13800 PF17676 LD-carboxypeptidase C-terminal domain AVS55_RS13800 PF02016 LD-carboxypeptidase N-terminal domain AVS55_RS13815 PF07690 Major Facilitator Superfamily AVS55_RS13825 PF03466 LysR substrate binding domain AVS55_RS13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVS55_RS13830 PF13378 Enolase C-terminal domain-like AVS55_RS13835 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS13855 PF02567 Phenazine biosynthesis-like protein AVS55_RS13865 PF03239 Iron permease FTR1 family AVS55_RS13875 PF10634 Fe2+ transport protein AVS55_RS13880 PF05233 PHB accumulation regulatory domain AVS55_RS13880 PF07879 PHB/PHA accumulation regulator DNA-binding domain AVS55_RS13885 PF00106 short chain dehydrogenase AVS55_RS13890 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AVS55_RS13895 PF02578 Multi-copper polyphenol oxidoreductase laccase AVS55_RS13900 PF00849 RNA pseudouridylate synthase AVS55_RS13900 PF01479 S4 domain AVS55_RS13905 PF13525 Outer membrane lipoprotein AVS55_RS13910 PF13307 Helicase C-terminal domain AVS55_RS13910 PF04851 Type III restriction enzyme, res subunit AVS55_RS13915 PF09371 Tex-like protein N-terminal domain AVS55_RS13915 PF00575 S1 RNA binding domain AVS55_RS13915 PF17674 HHH domain AVS55_RS13915 PF16921 Tex protein YqgF-like domain AVS55_RS13920 PF00579 tRNA synthetases class I (W and Y) AVS55_RS13945 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS13955 PF03466 LysR substrate binding domain AVS55_RS13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13965 PF03969 AFG1-like ATPase AVS55_RS13970 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS13970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS13975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS55_RS13975 PF00364 Biotin-requiring enzyme AVS55_RS13975 PF02817 e3 binding domain AVS55_RS13980 PF00676 Dehydrogenase E1 component AVS55_RS13980 PF16078 2-oxoglutarate dehydrogenase N-terminus AVS55_RS13980 PF16870 2-oxoglutarate dehydrogenase C-terminal AVS55_RS13980 PF02779 Transketolase, pyrimidine binding domain AVS55_RS13990 PF01037 Lrp/AsnC ligand binding domain AVS55_RS13995 PF17831 Pyruvate dehydrogenase E1 component middle domain AVS55_RS13995 PF00456 Transketolase, thiamine diphosphate binding domain AVS55_RS14000 PF01515 Phosphate acetyl/butaryl transferase AVS55_RS14000 PF00390 Malic enzyme, N-terminal domain AVS55_RS14000 PF03949 Malic enzyme, NAD binding domain AVS55_RS14005 PF16970 Type-1 fimbrial protein, A AVS55_RS14015 PF03449 Transcription elongation factor, N-terminal AVS55_RS14015 PF01272 Transcription elongation factor, GreA/GreB, C-term AVS55_RS14020 PF02811 PHP domain AVS55_RS14030 PF03772 Competence protein AVS55_RS14030 PF13567 Domain of unknown function (DUF4131) AVS55_RS14030 PF00753 Metallo-beta-lactamase superfamily AVS55_RS14060 PF01026 TatD related DNase AVS55_RS14065 PF00005 ABC transporter AVS55_RS14070 PF12704 MacB-like periplasmic core domain AVS55_RS14070 PF02687 FtsX-like permease family AVS55_RS14080 PF01368 DHH family AVS55_RS14080 PF02272 DHHA1 domain AVS55_RS14080 PF17768 RecJ OB domain AVS55_RS14090 PF00106 short chain dehydrogenase AVS55_RS14095 PF01336 OB-fold nucleic acid binding domain AVS55_RS14095 PF00152 tRNA synthetases class II (D, K and N) AVS55_RS14105 PF17932 Tetracyclin repressor-like, C-terminal domain AVS55_RS14105 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS14110 PF00501 AMP-binding enzyme AVS55_RS14115 PF00005 ABC transporter AVS55_RS14125 PF11862 Domain of unknown function (DUF3382) AVS55_RS14125 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS14135 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS14135 PF00005 ABC transporter AVS55_RS14145 PF07689 KaiB domain AVS55_RS14145 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS14150 PF00072 Response regulator receiver domain AVS55_RS14150 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS14155 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVS55_RS14165 PF03631 Virulence factor BrkB AVS55_RS14180 PF01207 Dihydrouridine synthase (Dus) AVS55_RS14185 PF01636 Phosphotransferase enzyme family AVS55_RS14210 PF01985 CRS1 / YhbY (CRM) domain AVS55_RS14215 PF01728 FtsJ-like methyltransferase AVS55_RS14220 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS14220 PF06480 FtsH Extracellular AVS55_RS14220 PF01434 Peptidase family M41 AVS55_RS14220 PF17862 AAA+ lid domain AVS55_RS14225 PF00809 Pterin binding enzyme AVS55_RS14230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS55_RS14230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS55_RS14230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS55_RS14230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS55_RS14240 PF02541 Ppx/GppA phosphatase family AVS55_RS14245 PF13089 Polyphosphate kinase N-terminal domain AVS55_RS14245 PF17941 Polyphosphate kinase C-terminal domain 1 AVS55_RS14245 PF13090 Polyphosphate kinase C-terminal domain 2 AVS55_RS14245 PF02503 Polyphosphate kinase middle domain AVS55_RS14250 PF12849 PBP superfamily domain AVS55_RS14255 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS14260 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS14265 PF00005 ABC transporter AVS55_RS14280 PF01337 Barstar (barnase inhibitor) AVS55_RS14290 PF03949 Malic enzyme, NAD binding domain AVS55_RS14290 PF01515 Phosphate acetyl/butaryl transferase AVS55_RS14290 PF00390 Malic enzyme, N-terminal domain AVS55_RS14300 PF00155 Aminotransferase class I and II AVS55_RS14305 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AVS55_RS14305 PF01464 Transglycosylase SLT domain AVS55_RS14310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVS55_RS14335 PF14824 Sirohaem biosynthesis protein central AVS55_RS14335 PF10414 Sirohaem synthase dimerisation region AVS55_RS14335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS55_RS14340 PF03797 Autotransporter beta-domain AVS55_RS14340 PF03212 Pertactin AVS55_RS14355 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AVS55_RS14360 PF02547 Queuosine biosynthesis protein AVS55_RS14365 PF01702 Queuine tRNA-ribosyltransferase AVS55_RS14370 PF02699 Preprotein translocase subunit AVS55_RS14375 PF02355 Protein export membrane protein AVS55_RS14375 PF13721 SecD export protein N-terminal TM region AVS55_RS14375 PF07549 SecD/SecF GG Motif AVS55_RS14380 PF02355 Protein export membrane protein AVS55_RS14380 PF07549 SecD/SecF GG Motif AVS55_RS14395 PF00919 Uncharacterized protein family UPF0004 AVS55_RS14395 PF01938 TRAM domain AVS55_RS14395 PF04055 Radical SAM superfamily AVS55_RS14400 PF02562 PhoH-like protein AVS55_RS14405 PF02130 Uncharacterized protein family UPF0054 AVS55_RS14410 PF03471 Transporter associated domain AVS55_RS14410 PF00571 CBS domain AVS55_RS14415 PF00795 Carbon-nitrogen hydrolase AVS55_RS14420 PF00248 Aldo/keto reductase family AVS55_RS14445 PF04344 Chemotaxis phosphatase, CheZ AVS55_RS14450 PF00072 Response regulator receiver domain AVS55_RS14455 PF00072 Response regulator receiver domain AVS55_RS14455 PF01339 CheB methylesterase AVS55_RS14465 PF02203 Tar ligand binding domain homologue AVS55_RS14465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS14465 PF00672 HAMP domain AVS55_RS14470 PF01584 CheW-like domain AVS55_RS14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS14475 PF02895 Signal transducing histidine kinase, homodimeric domain AVS55_RS14475 PF09078 CheY binding AVS55_RS14475 PF01627 Hpt domain AVS55_RS14475 PF01584 CheW-like domain AVS55_RS14480 PF00072 Response regulator receiver domain AVS55_RS14485 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVS55_RS14485 PF00691 OmpA family AVS55_RS14490 PF01618 MotA/TolQ/ExbB proton channel family AVS55_RS14495 PF05280 Flagellar transcriptional activator (FlhC) AVS55_RS14500 PF05247 Flagellar transcriptional activator (FlhD) AVS55_RS14505 PF04542 Sigma-70 region 2 AVS55_RS14505 PF04539 Sigma-70 region 3 AVS55_RS14505 PF04545 Sigma-70, region 4 AVS55_RS14515 PF01176 Translation initiation factor 1A / IF-1 AVS55_RS14525 PF01476 LysM domain AVS55_RS14525 PF08525 Opacity-associated protein A N-terminal motif AVS55_RS14525 PF01551 Peptidase family M23 AVS55_RS14535 PF00994 Probable molybdopterin binding domain AVS55_RS14545 PF03591 AzlC protein AVS55_RS14555 PF01556 DnaJ C terminal domain AVS55_RS14555 PF00226 DnaJ domain AVS55_RS14580 PF02798 Glutathione S-transferase, N-terminal domain AVS55_RS14580 PF14834 Glutathione S-transferase, C-terminal domain AVS55_RS14585 PF11339 Protein of unknown function (DUF3141) AVS55_RS14590 PF01515 Phosphate acetyl/butaryl transferase AVS55_RS14595 PF00871 Acetokinase family AVS55_RS14605 PF00162 Phosphoglycerate kinase AVS55_RS14610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVS55_RS14610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVS55_RS14615 PF02779 Transketolase, pyrimidine binding domain AVS55_RS14615 PF02780 Transketolase, C-terminal domain AVS55_RS14615 PF00456 Transketolase, thiamine diphosphate binding domain AVS55_RS14620 PF04452 RNA methyltransferase AVS55_RS14630 PF00700 Bacterial flagellin C-terminal helical region AVS55_RS14630 PF00669 Bacterial flagellin N-terminal helical region AVS55_RS14635 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS14635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS14640 PF00364 Biotin-requiring enzyme AVS55_RS14640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS55_RS14640 PF02817 e3 binding domain AVS55_RS14645 PF00456 Transketolase, thiamine diphosphate binding domain AVS55_RS14645 PF17831 Pyruvate dehydrogenase E1 component middle domain AVS55_RS14650 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS14650 PF00989 PAS fold AVS55_RS14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS14655 PF00072 Response regulator receiver domain AVS55_RS14655 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS14660 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVS55_RS14660 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVS55_RS14665 PF01432 Peptidase family M3 AVS55_RS14670 PF02630 SCO1/SenC AVS55_RS14680 PF02321 Outer membrane efflux protein AVS55_RS14685 PF00873 AcrB/AcrD/AcrF family AVS55_RS14690 PF00529 HlyD membrane-fusion protein of T1SS AVS55_RS14690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS55_RS14695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS14695 PF03466 LysR substrate binding domain AVS55_RS14700 PF00849 RNA pseudouridylate synthase AVS55_RS14700 PF01479 S4 domain AVS55_RS14705 PF04345 Chorismate lyase AVS55_RS14710 PF07690 Major Facilitator Superfamily AVS55_RS14720 PF00248 Aldo/keto reductase family AVS55_RS14730 PF00293 NUDIX domain AVS55_RS14735 PF01245 Ribosomal protein L19 AVS55_RS14750 PF04055 Radical SAM superfamily AVS55_RS14760 PF01507 Phosphoadenosine phosphosulfate reductase family AVS55_RS14765 PF12857 TOBE-like domain AVS55_RS14765 PF17850 CysA C-terminal regulatory domain AVS55_RS14765 PF00005 ABC transporter AVS55_RS14770 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS14775 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS14790 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVS55_RS14790 PF00578 AhpC/TSA family AVS55_RS14795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS14795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS14795 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVS55_RS14795 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS14800 PF01012 Electron transfer flavoprotein domain AVS55_RS14800 PF00766 Electron transfer flavoprotein FAD-binding domain AVS55_RS14805 PF01012 Electron transfer flavoprotein domain AVS55_RS14810 PF00850 Histone deacetylase domain AVS55_RS14815 PF13406 Transglycosylase SLT domain AVS55_RS14820 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS14830 PF10531 SLBB domain AVS55_RS14835 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS14840 PF00294 pfkB family carbohydrate kinase AVS55_RS14845 PF18073 Rubredoxin metal binding domain AVS55_RS14855 PF00216 Bacterial DNA-binding protein AVS55_RS14860 PF00575 S1 RNA binding domain AVS55_RS14865 PF02224 Cytidylate kinase AVS55_RS14870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVS55_RS14875 PF02153 Prephenate dehydrogenase AVS55_RS14880 PF00800 Prephenate dehydratase AVS55_RS14880 PF01842 ACT domain AVS55_RS14880 PF01817 Chorismate mutase type II AVS55_RS14885 PF00266 Aminotransferase class-V AVS55_RS14890 PF00521 DNA gyrase/topoisomerase IV, subunit A AVS55_RS14890 PF03989 DNA gyrase C-terminal domain, beta-propeller AVS55_RS14895 PF00691 OmpA family AVS55_RS14905 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS14910 PF07690 Major Facilitator Superfamily AVS55_RS14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS14935 PF03466 LysR substrate binding domain AVS55_RS14940 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS14950 PF00817 impB/mucB/samB family AVS55_RS14950 PF11798 IMS family HHH motif AVS55_RS14950 PF11799 impB/mucB/samB family C-terminal domain AVS55_RS14965 PF00326 Prolyl oligopeptidase family AVS55_RS14970 PF17092 Penicillin-binding protein OB-like domain AVS55_RS14970 PF00912 Transglycosylase AVS55_RS14970 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS14975 PF00149 Calcineurin-like phosphoesterase AVS55_RS14990 PF00248 Aldo/keto reductase family AVS55_RS14995 PF00248 Aldo/keto reductase family AVS55_RS15000 PF00664 ABC transporter transmembrane region AVS55_RS15000 PF00005 ABC transporter AVS55_RS15045 PF01039 Carboxyl transferase domain AVS55_RS15050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS15050 PF00289 Biotin carboxylase, N-terminal domain AVS55_RS15050 PF02785 Biotin carboxylase C-terminal domain AVS55_RS15055 PF07702 UTRA domain AVS55_RS15055 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS15075 PF00364 Biotin-requiring enzyme AVS55_RS15075 PF00682 HMGL-like AVS55_RS15075 PF02436 Conserved carboxylase domain AVS55_RS15080 PF00364 Biotin-requiring enzyme AVS55_RS15090 PF01966 HD domain AVS55_RS15110 PF07238 PilZ domain AVS55_RS15110 PF07317 Flagellar regulator YcgR AVS55_RS15130 PF05724 Thiopurine S-methyltransferase (TPMT) AVS55_RS15135 PF00005 ABC transporter AVS55_RS15135 PF00664 ABC transporter transmembrane region AVS55_RS15150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS15150 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS15150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS15155 PF10369 Small subunit of acetolactate synthase AVS55_RS15160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVS55_RS15160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVS55_RS15165 PF01066 CDP-alcohol phosphatidyltransferase AVS55_RS15180 PF00312 Ribosomal protein S15 AVS55_RS15185 PF00013 KH domain AVS55_RS15185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVS55_RS15185 PF03725 3' exoribonuclease family, domain 2 AVS55_RS15185 PF01138 3' exoribonuclease family, domain 1 AVS55_RS15185 PF00575 S1 RNA binding domain AVS55_RS15200 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS15200 PF13291 ACT domain AVS55_RS15215 PF00698 Acyl transferase domain AVS55_RS15215 PF16197 Ketoacyl-synthetase C-terminal extension AVS55_RS15215 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS55_RS15215 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS55_RS15215 PF08659 KR domain AVS55_RS15215 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS15215 PF14765 Polyketide synthase dehydratase AVS55_RS15215 PF00550 Phosphopantetheine attachment site AVS55_RS15215 PF08990 Erythronolide synthase docking AVS55_RS15220 PF00121 Triosephosphate isomerase AVS55_RS15225 PF03840 Preprotein translocase SecG subunit AVS55_RS15235 PF02028 BCCT, betaine/carnitine/choline family transporter AVS55_RS15245 PF07476 Methylaspartate ammonia-lyase C-terminus AVS55_RS15245 PF05034 Methylaspartate ammonia-lyase N-terminus AVS55_RS15250 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15265 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15280 PF03466 LysR substrate binding domain AVS55_RS15285 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS55_RS15290 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS55_RS15305 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15310 PF01266 FAD dependent oxidoreductase AVS55_RS15320 PF01968 Hydantoinase/oxoprolinase AVS55_RS15320 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS55_RS15330 PF00127 Copper binding proteins, plastocyanin/azurin family AVS55_RS15340 PF02321 Outer membrane efflux protein AVS55_RS15345 PF00873 AcrB/AcrD/AcrF family AVS55_RS15350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS55_RS15355 PF01638 HxlR-like helix-turn-helix AVS55_RS15365 PF02028 BCCT, betaine/carnitine/choline family transporter AVS55_RS15370 PF03466 LysR substrate binding domain AVS55_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15375 PF00781 Diacylglycerol kinase catalytic domain AVS55_RS15385 PF01569 PAP2 superfamily AVS55_RS15415 PF13609 Gram-negative porin AVS55_RS15420 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVS55_RS15425 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVS55_RS15430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVS55_RS15435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVS55_RS15445 PF10531 SLBB domain AVS55_RS15445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVS55_RS15445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVS55_RS15450 PF00384 Molybdopterin oxidoreductase AVS55_RS15450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVS55_RS15450 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVS55_RS15455 PF00146 NADH dehydrogenase AVS55_RS15460 PF12838 4Fe-4S dicluster domain AVS55_RS15465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVS55_RS15470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVS55_RS15475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVS55_RS15475 PF00361 Proton-conducting membrane transporter AVS55_RS15480 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVS55_RS15480 PF00361 Proton-conducting membrane transporter AVS55_RS15485 PF00361 Proton-conducting membrane transporter AVS55_RS15495 PF00593 TonB dependent receptor AVS55_RS15495 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS15500 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS15500 PF00593 TonB dependent receptor AVS55_RS15515 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS15515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS15515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS15520 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15525 PF03466 LysR substrate binding domain AVS55_RS15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15535 PF03461 TRCF domain AVS55_RS15535 PF02559 CarD-like/TRCF domain AVS55_RS15535 PF00270 DEAD/DEAH box helicase AVS55_RS15535 PF00271 Helicase conserved C-terminal domain AVS55_RS15535 PF17757 UvrB interaction domain AVS55_RS15540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVS55_RS15545 PF02542 YgbB family AVS55_RS15555 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AVS55_RS15560 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVS55_RS15560 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVS55_RS15560 PF01433 Peptidase family M1 domain AVS55_RS15580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS15580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS15580 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS15590 PF09084 NMT1/THI5 like AVS55_RS15595 PF00005 ABC transporter AVS55_RS15600 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15610 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS15610 PF00501 AMP-binding enzyme AVS55_RS15615 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS15615 PF00107 Zinc-binding dehydrogenase AVS55_RS15620 PF07729 FCD domain AVS55_RS15620 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS15630 PF07729 FCD domain AVS55_RS15630 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS15635 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS15635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS15635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS15655 PF01063 Amino-transferase class IV AVS55_RS15660 PF00005 ABC transporter AVS55_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15670 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15675 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15680 PF03466 LysR substrate binding domain AVS55_RS15685 PF02321 Outer membrane efflux protein AVS55_RS15690 PF13533 Biotin-lipoyl like AVS55_RS15695 PF00664 ABC transporter transmembrane region AVS55_RS15695 PF00005 ABC transporter AVS55_RS15695 PF03412 Peptidase C39 family AVS55_RS15700 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AVS55_RS15700 PF02382 N-terminal domain in RTX protein AVS55_RS15700 PF03497 Anthrax toxin LF subunit AVS55_RS15710 PF02794 RTX toxin acyltransferase family AVS55_RS15715 PF00171 Aldehyde dehydrogenase family AVS55_RS15720 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15725 PF01266 FAD dependent oxidoreductase AVS55_RS15730 PF02538 Hydantoinase B/oxoprolinase AVS55_RS15735 PF01968 Hydantoinase/oxoprolinase AVS55_RS15735 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS55_RS15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15740 PF03466 LysR substrate binding domain AVS55_RS15750 PF00348 Polyprenyl synthetase AVS55_RS15760 PF00829 Ribosomal prokaryotic L21 protein AVS55_RS15765 PF01016 Ribosomal L27 protein AVS55_RS15770 PF01018 GTP1/OBG AVS55_RS15770 PF01926 50S ribosome-binding GTPase AVS55_RS15775 PF01472 PUA domain AVS55_RS15775 PF00696 Amino acid kinase family AVS55_RS15820 PF04773 FecR protein AVS55_RS15820 PF16220 Domain of unknown function (DUF4880) AVS55_RS15825 PF00593 TonB dependent receptor AVS55_RS15825 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS15830 PF04264 YceI-like domain AVS55_RS15840 PF16653 Saccharopine dehydrogenase C-terminal domain AVS55_RS15840 PF03435 Saccharopine dehydrogenase NADP binding domain AVS55_RS15845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVS55_RS15865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15875 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS15880 PF00005 ABC transporter AVS55_RS15885 PF01425 Amidase AVS55_RS15890 PF00202 Aminotransferase class-III AVS55_RS15910 PF00691 OmpA family AVS55_RS15910 PF04972 BON domain AVS55_RS15915 PF01329 Pterin 4 alpha carbinolamine dehydratase AVS55_RS15925 PF00483 Nucleotidyl transferase AVS55_RS15930 PF01636 Phosphotransferase enzyme family AVS55_RS15935 PF04453 LPS transport system D AVS55_RS15940 PF00639 PPIC-type PPIASE domain AVS55_RS15940 PF09312 SurA N-terminal domain AVS55_RS15945 PF00398 Ribosomal RNA adenine dimethylase AVS55_RS15950 PF02595 Glycerate kinase family AVS55_RS15955 PF02887 Pyruvate kinase, alpha/beta domain AVS55_RS15955 PF00224 Pyruvate kinase, barrel domain AVS55_RS15960 PF07670 Nucleoside recognition AVS55_RS15965 PF09317 Domain of unknown function (DUF1974) AVS55_RS15965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS15965 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS15965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS15985 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15990 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15995 PF00005 ABC transporter AVS55_RS16000 PF01032 FecCD transport family AVS55_RS16010 PF00691 OmpA family AVS55_RS16015 PF07676 WD40-like Beta Propeller Repeat AVS55_RS16015 PF04052 TolB amino-terminal domain AVS55_RS16025 PF02472 Biopolymer transport protein ExbD/TolR AVS55_RS16030 PF01618 MotA/TolQ/ExbB proton channel family AVS55_RS16035 PF03061 Thioesterase superfamily AVS55_RS16040 PF03129 Anticodon binding domain AVS55_RS16040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS55_RS16040 PF04073 Aminoacyl-tRNA editing domain AVS55_RS16045 PF00293 NUDIX domain AVS55_RS16050 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS16050 PF00072 Response regulator receiver domain AVS55_RS16060 PF02586 SOS response associated peptidase (SRAP) AVS55_RS16130 PF06791 Prophage tail length tape measure protein AVS55_RS16275 PF03180 NLPA lipoprotein AVS55_RS16285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVS55_RS16285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVS55_RS16290 PF00005 ABC transporter AVS55_RS16295 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS16295 PF00005 ABC transporter AVS55_RS16300 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS16305 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS16310 PF13458 Periplasmic binding protein AVS55_RS16315 PF01425 Amidase AVS55_RS16320 PF00484 Carbonic anhydrase AVS55_RS16335 PF00570 HRDC domain AVS55_RS16335 PF16124 RecQ zinc-binding AVS55_RS16335 PF00271 Helicase conserved C-terminal domain AVS55_RS16335 PF00270 DEAD/DEAH box helicase AVS55_RS16335 PF09382 RQC domain AVS55_RS16340 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVS55_RS16340 PF05491 RuvB C-terminal winged helix domain AVS55_RS16340 PF17864 RuvB AAA lid domain AVS55_RS16345 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS16350 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS16355 PF07499 RuvA, C-terminal domain AVS55_RS16355 PF01330 RuvA N terminal domain AVS55_RS16360 PF02075 Crossover junction endodeoxyribonuclease RuvC AVS55_RS16365 PF01808 AICARFT/IMPCHase bienzyme AVS55_RS16365 PF02142 MGS-like domain AVS55_RS16370 PF02954 Bacterial regulatory protein, Fis family AVS55_RS16375 PF01207 Dihydrouridine synthase (Dus) AVS55_RS16380 PF01494 FAD binding domain AVS55_RS16390 PF00557 Metallopeptidase family M24 AVS55_RS16390 PF05195 Aminopeptidase P, N-terminal domain AVS55_RS16415 PF13609 Gram-negative porin AVS55_RS16425 PF00483 Nucleotidyl transferase AVS55_RS16430 PF01435 Peptidase family M48 AVS55_RS16430 PF13181 Tetratricopeptide repeat AVS55_RS16435 PF00561 alpha/beta hydrolase fold AVS55_RS16450 PF01063 Amino-transferase class IV AVS55_RS16465 PF00270 DEAD/DEAH box helicase AVS55_RS16465 PF00271 Helicase conserved C-terminal domain AVS55_RS16485 PF00994 Probable molybdopterin binding domain AVS55_RS16485 PF18146 Damage-inducible protein CinA KH domain AVS55_RS16485 PF02464 Competence-damaged protein AVS55_RS16490 PF09339 IclR helix-turn-helix domain AVS55_RS16490 PF01614 Bacterial transcriptional regulator AVS55_RS16495 PF05785 Rho-activating domain of cytotoxic necrotizing factor AVS55_RS16495 PF18807 Tripartite Tc toxins repeat AVS55_RS16500 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS16510 PF01180 Dihydroorotate dehydrogenase AVS55_RS16515 PF04377 Arginine-tRNA-protein transferase, C terminus AVS55_RS16515 PF04376 Arginine-tRNA-protein transferase, N terminus AVS55_RS16520 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVS55_RS16530 PF03466 LysR substrate binding domain AVS55_RS16530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS16570 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS16570 PF07729 FCD domain AVS55_RS16575 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS16575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS16575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS16580 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS16585 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS55_RS16590 PF03949 Malic enzyme, NAD binding domain AVS55_RS16590 PF01515 Phosphate acetyl/butaryl transferase AVS55_RS16590 PF00390 Malic enzyme, N-terminal domain AVS55_RS16600 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS16605 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS16610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS16610 PF00005 ABC transporter AVS55_RS16625 PF03466 LysR substrate binding domain AVS55_RS16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS16640 PF01022 Bacterial regulatory protein, arsR family AVS55_RS16655 PF03594 Benzoate membrane transport protein AVS55_RS16660 PF00037 4Fe-4S binding domain AVS55_RS16665 PF01467 Cytidylyltransferase-like AVS55_RS16675 PF00448 SRP54-type protein, GTPase domain AVS55_RS16675 PF02881 SRP54-type protein, helical bundle domain AVS55_RS16685 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS16690 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS16695 PF00005 ABC transporter AVS55_RS16705 PF00005 ABC transporter AVS55_RS16725 PF00925 GTP cyclohydrolase II AVS55_RS16725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVS55_RS16730 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVS55_RS16735 PF01029 NusB family AVS55_RS16740 PF00586 AIR synthase related protein, N-terminal domain AVS55_RS16740 PF02769 AIR synthase related protein, C-terminal domain AVS55_RS16745 PF04608 Phosphatidylglycerophosphatase A AVS55_RS16750 PF18146 Damage-inducible protein CinA KH domain AVS55_RS16750 PF00994 Probable molybdopterin binding domain AVS55_RS16750 PF02464 Competence-damaged protein AVS55_RS16755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVS55_RS16760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS16765 PF01219 Prokaryotic diacylglycerol kinase AVS55_RS16770 PF03631 Virulence factor BrkB AVS55_RS16775 PF03797 Autotransporter beta-domain AVS55_RS16775 PF03212 Pertactin AVS55_RS16780 PF00118 TCP-1/cpn60 chaperonin family AVS55_RS16785 PF00166 Chaperonin 10 Kd subunit AVS55_RS16805 PF00890 FAD binding domain AVS55_RS16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS16815 PF03466 LysR substrate binding domain AVS55_RS16820 PF00890 FAD binding domain AVS55_RS16840 PF00990 Diguanylate cyclase, GGDEF domain AVS55_RS16845 PF00072 Response regulator receiver domain AVS55_RS16875 PF03781 Sulfatase-modifying factor enzyme 1 AVS55_RS16875 PF12867 DinB superfamily AVS55_RS16880 PF10017 Histidine-specific methyltransferase, SAM-dependent AVS55_RS16890 PF13091 PLD-like domain AVS55_RS16890 PF13396 Phospholipase_D-nuclease N-terminal AVS55_RS16900 PF01645 Conserved region in glutamate synthase AVS55_RS16905 PF04143 Sulphur transport AVS55_RS16910 PF03547 Membrane transport protein AVS55_RS16915 PF13673 Acetyltransferase (GNAT) domain AVS55_RS16935 PF08206 Ribonuclease B OB domain AVS55_RS16935 PF17876 Cold shock domain AVS55_RS16935 PF00575 S1 RNA binding domain AVS55_RS16935 PF00773 RNB domain AVS55_RS16935 PF08461 Ribonuclease R winged-helix domain AVS55_RS16940 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVS55_RS16940 PF00588 SpoU rRNA Methylase family AVS55_RS16945 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS55_RS16950 PF13640 2OG-Fe(II) oxygenase superfamily AVS55_RS16950 PF18331 PKHD-type hydroxylase C-terminal domain AVS55_RS16955 PF00216 Bacterial DNA-binding protein AVS55_RS16970 PF01618 MotA/TolQ/ExbB proton channel family AVS55_RS16975 PF02472 Biopolymer transport protein ExbD/TolR AVS55_RS16980 PF00072 Response regulator receiver domain AVS55_RS16980 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS16985 PF08521 Two-component sensor kinase N-terminal AVS55_RS16985 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS16990 PF02705 K+ potassium transporter AVS55_RS16995 PF00764 Arginosuccinate synthase AVS55_RS17000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS55_RS17000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS55_RS17005 PF00202 Aminotransferase class-III AVS55_RS17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17015 PF03466 LysR substrate binding domain AVS55_RS17025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS17025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS55_RS17030 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17045 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS17045 PF07729 FCD domain AVS55_RS17055 PF07690 Major Facilitator Superfamily AVS55_RS17065 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS17070 PF00578 AhpC/TSA family AVS55_RS17075 PF00672 HAMP domain AVS55_RS17075 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS17085 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS17085 PF00072 Response regulator receiver domain AVS55_RS17090 PF00814 Glycoprotease family AVS55_RS17095 PF03167 Uracil DNA glycosylase superfamily AVS55_RS17100 PF07690 Major Facilitator Superfamily AVS55_RS17105 PF02463 RecF/RecN/SMC N terminal domain AVS55_RS17105 PF06470 SMC proteins Flexible Hinge Domain AVS55_RS17115 PF03120 NAD-dependent DNA ligase OB-fold domain AVS55_RS17115 PF12826 Helix-hairpin-helix motif AVS55_RS17115 PF01653 NAD-dependent DNA ligase adenylation domain AVS55_RS17115 PF00533 BRCA1 C Terminus (BRCT) domain AVS55_RS17115 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVS55_RS17130 PF04279 Intracellular septation protein A AVS55_RS17135 PF01641 SelR domain AVS55_RS17140 PF00005 ABC transporter AVS55_RS17145 PF02361 Cobalt transport protein AVS55_RS17150 PF02632 BioY family AVS55_RS17165 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS17165 PF00005 ABC transporter AVS55_RS17170 PF01063 Amino-transferase class IV AVS55_RS17185 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS17195 PF00005 ABC transporter AVS55_RS17200 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS17200 PF00005 ABC transporter AVS55_RS17205 PF00633 Helix-hairpin-helix motif AVS55_RS17205 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS55_RS17205 PF10576 Iron-sulfur binding domain of endonuclease III AVS55_RS17210 PF04060 Putative Fe-S cluster AVS55_RS17220 PF00175 Oxidoreductase NAD-binding domain AVS55_RS17220 PF00970 Oxidoreductase FAD-binding domain AVS55_RS17225 PF11953 Domain of unknown function (DUF3470) AVS55_RS17225 PF00037 4Fe-4S binding domain AVS55_RS17230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AVS55_RS17230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVS55_RS17235 PF01042 Endoribonuclease L-PSP AVS55_RS17245 PF06167 Glucose-regulated metallo-peptidase M90 AVS55_RS17250 PF02824 TGS domain AVS55_RS17250 PF13291 ACT domain AVS55_RS17250 PF04607 Region found in RelA / SpoT proteins AVS55_RS17255 PF01546 Peptidase family M20/M25/M40 AVS55_RS17255 PF07687 Peptidase dimerisation domain AVS55_RS17260 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS17265 PF00290 Tryptophan synthase alpha chain AVS55_RS17270 PF01039 Carboxyl transferase domain AVS55_RS17270 PF17848 Acetyl-coA carboxylase zinc finger domain AVS55_RS17275 PF09411 Lipid A 3-O-deacylase (PagL) AVS55_RS17290 PF00575 S1 RNA binding domain AVS55_RS17290 PF12111 Polyribonucleotide phosphorylase C terminal AVS55_RS17290 PF10150 Ribonuclease E/G family AVS55_RS17295 PF01479 S4 domain AVS55_RS17295 PF00849 RNA pseudouridylate synthase AVS55_RS17300 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS17305 PF00174 Oxidoreductase molybdopterin binding domain AVS55_RS17310 PF01794 Ferric reductase like transmembrane component AVS55_RS17320 PF02515 CoA-transferase family III AVS55_RS17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17325 PF03466 LysR substrate binding domain AVS55_RS17335 PF02515 CoA-transferase family III AVS55_RS17340 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17350 PF03466 LysR substrate binding domain AVS55_RS17355 PF01042 Endoribonuclease L-PSP AVS55_RS17360 PF00970 Oxidoreductase FAD-binding domain AVS55_RS17360 PF00175 Oxidoreductase NAD-binding domain AVS55_RS17360 PF00042 Globin AVS55_RS17365 PF02667 Short chain fatty acid transporter AVS55_RS17370 PF00171 Aldehyde dehydrogenase family AVS55_RS17375 PF07729 FCD domain AVS55_RS17375 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS17385 PF00313 'Cold-shock' DNA-binding domain AVS55_RS17390 PF03466 LysR substrate binding domain AVS55_RS17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17410 PF00108 Thiolase, N-terminal domain AVS55_RS17410 PF02803 Thiolase, C-terminal domain AVS55_RS17420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS17420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS17420 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS17425 PF03466 LysR substrate binding domain AVS55_RS17425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17430 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17435 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS17440 PF02515 CoA-transferase family III AVS55_RS17445 PF03471 Transporter associated domain AVS55_RS17445 PF03741 Integral membrane protein TerC family AVS55_RS17450 PF02308 MgtC family AVS55_RS17455 PF14492 Elongation Factor G, domain II AVS55_RS17455 PF03144 Elongation factor Tu domain 2 AVS55_RS17455 PF00009 Elongation factor Tu GTP binding domain AVS55_RS17455 PF03764 Elongation factor G, domain IV AVS55_RS17455 PF00679 Elongation factor G C-terminus AVS55_RS17460 PF00155 Aminotransferase class I and II AVS55_RS17460 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS17470 PF00582 Universal stress protein family AVS55_RS17475 PF00679 Elongation factor G C-terminus AVS55_RS17475 PF03144 Elongation factor Tu domain 2 AVS55_RS17475 PF03764 Elongation factor G, domain IV AVS55_RS17475 PF00009 Elongation factor Tu GTP binding domain AVS55_RS17475 PF14492 Elongation Factor G, domain II AVS55_RS17485 PF00701 Dihydrodipicolinate synthetase family AVS55_RS17490 PF03466 LysR substrate binding domain AVS55_RS17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17495 PF02515 CoA-transferase family III AVS55_RS17500 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17505 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS17505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS17505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS17510 PF01575 MaoC like domain AVS55_RS17525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVS55_RS17525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVS55_RS17530 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS17535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS17535 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS17535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS17540 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17545 PF13380 CoA binding domain AVS55_RS17545 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS17555 PF00676 Dehydrogenase E1 component AVS55_RS17560 PF02780 Transketolase, C-terminal domain AVS55_RS17560 PF02779 Transketolase, pyrimidine binding domain AVS55_RS17565 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS17570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS55_RS17570 PF00364 Biotin-requiring enzyme AVS55_RS17570 PF02817 e3 binding domain AVS55_RS17575 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS17575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS17575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS17580 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS17580 PF00501 AMP-binding enzyme AVS55_RS17590 PF13458 Periplasmic binding protein AVS55_RS17595 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS17600 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS17600 PF00005 ABC transporter AVS55_RS17605 PF00005 ABC transporter AVS55_RS17610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS17610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS17625 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17640 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17650 PF00899 ThiF family AVS55_RS17655 PF13180 PDZ domain AVS55_RS17655 PF03572 Peptidase family S41 AVS55_RS17660 PF01551 Peptidase family M23 AVS55_RS17665 PF00300 Histidine phosphatase superfamily (branch 1) AVS55_RS17670 PF00581 Rhodanese-like domain AVS55_RS17670 PF12368 Rhodanase C-terminal AVS55_RS17670 PF17773 UPF0176 acylphosphatase like domain AVS55_RS17675 PF00462 Glutaredoxin AVS55_RS17680 PF02556 Preprotein translocase subunit SecB AVS55_RS17685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVS55_RS17685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVS55_RS17690 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17695 PF00588 SpoU rRNA Methylase family AVS55_RS17705 PF08241 Methyltransferase domain AVS55_RS17710 PF04107 Glutamate-cysteine ligase family 2(GCS2) AVS55_RS17715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS55_RS17725 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS17730 PF00005 ABC transporter AVS55_RS17740 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS17740 PF01799 [2Fe-2S] binding domain AVS55_RS17745 PF00941 FAD binding domain in molybdopterin dehydrogenase AVS55_RS17745 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVS55_RS17750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVS55_RS17750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS55_RS17755 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS17760 PF00355 Rieske [2Fe-2S] domain AVS55_RS17765 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS17765 PF14759 Reductase C-terminal AVS55_RS17770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS55_RS17770 PF00355 Rieske [2Fe-2S] domain AVS55_RS17780 PF00857 Isochorismatase family AVS55_RS17790 PF00561 alpha/beta hydrolase fold AVS55_RS17795 PF17645 Arylmalonate decarboxylase AVS55_RS17805 PF12804 MobA-like NTP transferase domain AVS55_RS17815 PF01047 MarR family AVS55_RS17820 PF02386 Cation transport protein AVS55_RS17825 PF02254 TrkA-N domain AVS55_RS17825 PF02080 TrkA-C domain AVS55_RS17830 PF00158 Sigma-54 interaction domain AVS55_RS17830 PF00072 Response regulator receiver domain AVS55_RS17830 PF02954 Bacterial regulatory protein, Fis family AVS55_RS17835 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS17835 PF00672 HAMP domain AVS55_RS17835 PF00989 PAS fold AVS55_RS17835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS17845 PF01029 NusB family AVS55_RS17845 PF01189 16S rRNA methyltransferase RsmB/F AVS55_RS17855 PF01958 Domain of unknown function DUF108 AVS55_RS17855 PF03447 Homoserine dehydrogenase, NAD binding domain AVS55_RS17880 PF01810 LysE type translocator AVS55_RS17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17885 PF03466 LysR substrate binding domain AVS55_RS17895 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17900 PF01168 Alanine racemase, N-terminal domain AVS55_RS17905 PF00155 Aminotransferase class I and II AVS55_RS17910 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS17920 PF00682 HMGL-like AVS55_RS17925 PF17782 DprA winged helix domain AVS55_RS17925 PF02481 DNA recombination-mediator protein A AVS55_RS17930 PF01037 Lrp/AsnC ligand binding domain AVS55_RS17935 PF00266 Aminotransferase class-V AVS55_RS17940 PF01327 Polypeptide deformylase AVS55_RS17955 PF00551 Formyl transferase AVS55_RS17955 PF02911 Formyl transferase, C-terminal domain AVS55_RS17965 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS17975 PF03641 Possible lysine decarboxylase AVS55_RS17985 PF18693 TRAM domain AVS55_RS17985 PF04055 Radical SAM superfamily AVS55_RS17985 PF00919 Uncharacterized protein family UPF0004 AVS55_RS17990 PF01361 Tautomerase enzyme AVS55_RS17995 PF01266 FAD dependent oxidoreductase AVS55_RS18000 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18005 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS18005 PF07729 FCD domain AVS55_RS18020 PF00202 Aminotransferase class-III AVS55_RS18025 PF00491 Arginase family AVS55_RS18040 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18045 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS18050 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS18055 PF09339 IclR helix-turn-helix domain AVS55_RS18055 PF01614 Bacterial transcriptional regulator AVS55_RS18060 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS18060 PF00501 AMP-binding enzyme AVS55_RS18065 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18075 PF12951 Passenger-associated-transport-repeat AVS55_RS18075 PF12951 Passenger-associated-transport-repeat AVS55_RS18095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18095 PF03466 LysR substrate binding domain AVS55_RS18105 PF14031 Putative serine dehydratase domain AVS55_RS18105 PF01168 Alanine racemase, N-terminal domain AVS55_RS18110 PF07411 Domain of unknown function (DUF1508) AVS55_RS18115 PF01145 SPFH domain / Band 7 family AVS55_RS18125 PF01042 Endoribonuclease L-PSP AVS55_RS18155 PF03837 RecT family AVS55_RS18190 PF00589 Phage integrase family AVS55_RS18195 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS18210 PF03466 LysR substrate binding domain AVS55_RS18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18215 PF02525 Flavodoxin-like fold AVS55_RS18225 PF14849 YidC periplasmic domain AVS55_RS18225 PF02096 60Kd inner membrane protein AVS55_RS18230 PF01809 Putative membrane protein insertion efficiency factor AVS55_RS18235 PF00825 Ribonuclease P AVS55_RS18240 PF00468 Ribosomal protein L34 AVS55_RS18245 PF08299 Bacterial dnaA protein helix-turn-helix AVS55_RS18245 PF00308 Bacterial dnaA protein AVS55_RS18245 PF11638 DnaA N-terminal domain AVS55_RS18250 PF02767 DNA polymerase III beta subunit, central domain AVS55_RS18250 PF00712 DNA polymerase III beta subunit, N-terminal domain AVS55_RS18250 PF02768 DNA polymerase III beta subunit, C-terminal domain AVS55_RS18255 PF18053 DNA gyrase B subunit insert domain AVS55_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS18255 PF00986 DNA gyrase B subunit, carboxyl terminus AVS55_RS18255 PF00204 DNA gyrase B AVS55_RS18255 PF01751 Toprim domain AVS55_RS18260 PF09339 IclR helix-turn-helix domain AVS55_RS18260 PF01614 Bacterial transcriptional regulator AVS55_RS18265 PF01425 Amidase AVS55_RS18270 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18275 PF00708 Acylphosphatase AVS55_RS18280 PF01070 FMN-dependent dehydrogenase AVS55_RS18300 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS18300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS18300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS18305 PF09278 MerR, DNA binding AVS55_RS18305 PF00376 MerR family regulatory protein AVS55_RS18325 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS18325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS18325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS18340 PF01039 Carboxyl transferase domain AVS55_RS18345 PF00364 Biotin-requiring enzyme AVS55_RS18345 PF00289 Biotin carboxylase, N-terminal domain AVS55_RS18345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS18345 PF02785 Biotin carboxylase C-terminal domain AVS55_RS18355 PF00202 Aminotransferase class-III AVS55_RS18360 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18365 PF01168 Alanine racemase, N-terminal domain AVS55_RS18365 PF14031 Putative serine dehydratase domain AVS55_RS18370 PF16868 NMT1-like family AVS55_RS18380 PF00593 TonB dependent receptor AVS55_RS18380 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS18385 PF04361 Protein of unknown function (DUF494) AVS55_RS18400 PF01751 Toprim domain AVS55_RS18400 PF01131 DNA topoisomerase AVS55_RS18410 PF00005 ABC transporter AVS55_RS18415 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS18425 PF00171 Aldehyde dehydrogenase family AVS55_RS18435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS18435 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS18435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS18440 PF01037 Lrp/AsnC ligand binding domain AVS55_RS18445 PF01062 Bestrophin, RFP-TM, chloride channel AVS55_RS18455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVS55_RS18470 PF02574 Homocysteine S-methyltransferase AVS55_RS18470 PF02310 B12 binding domain AVS55_RS18470 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVS55_RS18470 PF00809 Pterin binding enzyme AVS55_RS18470 PF02607 B12 binding domain AVS55_RS18475 PF00593 TonB dependent receptor AVS55_RS18475 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS18480 PF01497 Periplasmic binding protein AVS55_RS18485 PF05690 Thiazole biosynthesis protein ThiG AVS55_RS18490 PF08543 Phosphomethylpyrimidine kinase AVS55_RS18505 PF02321 Outer membrane efflux protein AVS55_RS18510 PF01467 Cytidylyltransferase-like AVS55_RS18520 PF01594 AI-2E family transporter AVS55_RS18530 PF07885 Ion channel AVS55_RS18530 PF02254 TrkA-N domain AVS55_RS18540 PF00164 Ribosomal protein S12/S23 AVS55_RS18545 PF00177 Ribosomal protein S7p/S5e AVS55_RS18550 PF03764 Elongation factor G, domain IV AVS55_RS18550 PF00009 Elongation factor Tu GTP binding domain AVS55_RS18550 PF00679 Elongation factor G C-terminus AVS55_RS18550 PF14492 Elongation Factor G, domain II AVS55_RS18550 PF03144 Elongation factor Tu domain 2 AVS55_RS18555 PF00009 Elongation factor Tu GTP binding domain AVS55_RS18555 PF03144 Elongation factor Tu domain 2 AVS55_RS18555 PF03143 Elongation factor Tu C-terminal domain AVS55_RS18560 PF00338 Ribosomal protein S10p/S20e AVS55_RS18565 PF00297 Ribosomal protein L3 AVS55_RS18570 PF00573 Ribosomal protein L4/L1 family AVS55_RS18575 PF00276 Ribosomal protein L23 AVS55_RS18580 PF03947 Ribosomal Proteins L2, C-terminal domain AVS55_RS18580 PF00181 Ribosomal Proteins L2, RNA binding domain AVS55_RS18585 PF00203 Ribosomal protein S19 AVS55_RS18590 PF00237 Ribosomal protein L22p/L17e AVS55_RS18595 PF00189 Ribosomal protein S3, C-terminal domain AVS55_RS18595 PF07650 KH domain AVS55_RS18600 PF00252 Ribosomal protein L16p/L10e AVS55_RS18605 PF00831 Ribosomal L29 protein AVS55_RS18610 PF00366 Ribosomal protein S17 AVS55_RS18620 PF00171 Aldehyde dehydrogenase family AVS55_RS18630 PF00238 Ribosomal protein L14p/L23e AVS55_RS18635 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVS55_RS18640 PF00673 ribosomal L5P family C-terminus AVS55_RS18640 PF00281 Ribosomal protein L5 AVS55_RS18645 PF00253 Ribosomal protein S14p/S29e AVS55_RS18650 PF00410 Ribosomal protein S8 AVS55_RS18655 PF00347 Ribosomal protein L6 AVS55_RS18660 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVS55_RS18665 PF00333 Ribosomal protein S5, N-terminal domain AVS55_RS18665 PF03719 Ribosomal protein S5, C-terminal domain AVS55_RS18670 PF00327 Ribosomal protein L30p/L7e AVS55_RS18675 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVS55_RS18680 PF00344 SecY translocase AVS55_RS18685 PF01176 Translation initiation factor 1A / IF-1 AVS55_RS18690 PF00444 Ribosomal protein L36 AVS55_RS18695 PF00416 Ribosomal protein S13/S18 AVS55_RS18700 PF00411 Ribosomal protein S11 AVS55_RS18705 PF00163 Ribosomal protein S4/S9 N-terminal domain AVS55_RS18705 PF01479 S4 domain AVS55_RS18710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVS55_RS18710 PF01000 RNA polymerase Rpb3/RpoA insert domain AVS55_RS18710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVS55_RS18715 PF01196 Ribosomal protein L17 AVS55_RS18720 PF01230 HIT domain AVS55_RS18725 PF03091 CutA1 divalent ion tolerance protein AVS55_RS18730 PF02683 Cytochrome C biogenesis protein transmembrane region AVS55_RS18730 PF11412 Disulphide bond corrector protein DsbC AVS55_RS18735 PF00892 EamA-like transporter family AVS55_RS18740 PF00490 Delta-aminolevulinic acid dehydratase AVS55_RS18745 PF01926 50S ribosome-binding GTPase AVS55_RS18750 PF00034 Cytochrome c AVS55_RS18755 PF05140 ResB-like family AVS55_RS18760 PF01578 Cytochrome C assembly protein AVS55_RS18765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVS55_RS18765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVS55_RS18770 PF13627 Prokaryotic lipoprotein-attachment site AVS55_RS18775 PF01491 Frataxin-like domain AVS55_RS18780 PF17092 Penicillin-binding protein OB-like domain AVS55_RS18780 PF00912 Transglycosylase AVS55_RS18780 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS18785 PF01202 Shikimate kinase AVS55_RS18790 PF01761 3-dehydroquinate synthase AVS55_RS18795 PF01966 HD domain AVS55_RS18795 PF13286 Phosphohydrolase-associated domain AVS55_RS18800 PF00043 Glutathione S-transferase, C-terminal domain AVS55_RS18800 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS18805 PF17760 UvrA interaction domain AVS55_RS18805 PF17755 UvrA DNA-binding domain AVS55_RS18810 PF07690 Major Facilitator Superfamily AVS55_RS18815 PF00436 Single-strand binding protein family AVS55_RS18820 PF00593 TonB dependent receptor AVS55_RS18820 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS18830 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS55_RS18840 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18850 PF03466 LysR substrate binding domain AVS55_RS18855 PF01979 Amidohydrolase family AVS55_RS18860 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18865 PF13439 Glycosyltransferase Family 4 AVS55_RS18865 PF00534 Glycosyl transferases group 1 AVS55_RS18875 PF03466 LysR substrate binding domain AVS55_RS18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18885 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS18890 PF00005 ABC transporter AVS55_RS18910 PF01274 Malate synthase AVS55_RS18915 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS18915 PF07729 FCD domain AVS55_RS18930 PF01040 UbiA prenyltransferase family AVS55_RS18935 PF00155 Aminotransferase class I and II AVS55_RS18940 PF13185 GAF domain AVS55_RS18945 PF00701 Dihydrodipicolinate synthetase family AVS55_RS18960 PF04972 BON domain AVS55_RS18960 PF01476 LysM domain AVS55_RS18965 PF02597 ThiS family AVS55_RS18965 PF05690 Thiazole biosynthesis protein ThiG AVS55_RS18970 PF00561 alpha/beta hydrolase fold AVS55_RS18975 PF02390 Putative methyltransferase AVS55_RS18990 PF00682 HMGL-like AVS55_RS18995 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19015 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS19015 PF07702 UTRA domain AVS55_RS19020 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19030 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS19030 PF07702 UTRA domain AVS55_RS19035 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19045 PF00005 ABC transporter AVS55_RS19050 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS19055 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19060 PF08990 Erythronolide synthase docking AVS55_RS19060 PF14765 Polyketide synthase dehydratase AVS55_RS19060 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS55_RS19060 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS55_RS19060 PF08659 KR domain AVS55_RS19060 PF00550 Phosphopantetheine attachment site AVS55_RS19060 PF16197 Ketoacyl-synthetase C-terminal extension AVS55_RS19060 PF00698 Acyl transferase domain AVS55_RS19060 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS19065 PF02515 CoA-transferase family III AVS55_RS19070 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS19075 PF00293 NUDIX domain AVS55_RS19075 PF09297 NADH pyrophosphatase zinc ribbon domain AVS55_RS19080 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS19080 PF00970 Oxidoreductase FAD-binding domain AVS55_RS19080 PF00175 Oxidoreductase NAD-binding domain AVS55_RS19085 PF01425 Amidase AVS55_RS19095 PF03466 LysR substrate binding domain AVS55_RS19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS19100 PF13458 Periplasmic binding protein AVS55_RS19110 PF00005 ABC transporter AVS55_RS19120 PF02653 Branched-chain amino acid transport system / permease component AVS55_RS19130 PF00355 Rieske [2Fe-2S] domain AVS55_RS19145 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVS55_RS19145 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVS55_RS19160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS55_RS19160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS55_RS19160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS55_RS19165 PF07690 Major Facilitator Superfamily AVS55_RS19170 PF14602 Hexapeptide repeat of succinyl-transferase AVS55_RS19170 PF12804 MobA-like NTP transferase domain AVS55_RS19170 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS19190 PF02630 SCO1/SenC AVS55_RS19195 PF01040 UbiA prenyltransferase family AVS55_RS19200 PF02628 Cytochrome oxidase assembly protein AVS55_RS19220 PF00510 Cytochrome c oxidase subunit III AVS55_RS19235 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS55_RS19240 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVS55_RS19240 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVS55_RS19250 PF00999 Sodium/hydrogen exchanger family AVS55_RS19255 PF00149 Calcineurin-like phosphoesterase AVS55_RS19260 PF00140 Sigma-70 factor, region 1.2 AVS55_RS19260 PF04542 Sigma-70 region 2 AVS55_RS19260 PF04545 Sigma-70, region 4 AVS55_RS19270 PF00756 Putative esterase AVS55_RS19275 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS19275 PF00107 Zinc-binding dehydrogenase AVS55_RS19285 PF04898 Glutamate synthase central domain AVS55_RS19285 PF01493 GXGXG motif AVS55_RS19285 PF01645 Conserved region in glutamate synthase AVS55_RS19285 PF00310 Glutamine amidotransferases class-II AVS55_RS19290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS19290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVS55_RS19295 PF03922 OmpW family AVS55_RS19300 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19305 PF00005 ABC transporter AVS55_RS19310 PF02405 Permease MlaE AVS55_RS19315 PF02470 MlaD protein AVS55_RS19320 PF04333 MlaA lipoprotein AVS55_RS19330 PF00005 ABC transporter AVS55_RS19335 PF01061 ABC-2 type transporter AVS55_RS19345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVS55_RS19350 PF01634 ATP phosphoribosyltransferase AVS55_RS19355 PF00815 Histidinol dehydrogenase AVS55_RS19360 PF00155 Aminotransferase class I and II AVS55_RS19365 PF00475 Imidazoleglycerol-phosphate dehydratase AVS55_RS19370 PF00117 Glutamine amidotransferase class-I AVS55_RS19375 PF00977 Histidine biosynthesis protein AVS55_RS19380 PF00977 Histidine biosynthesis protein AVS55_RS19385 PF01502 Phosphoribosyl-AMP cyclohydrolase AVS55_RS19390 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVS55_RS19395 PF01230 HIT domain AVS55_RS19400 PF02416 mttA/Hcf106 family AVS55_RS19405 PF02416 mttA/Hcf106 family AVS55_RS19410 PF00902 Sec-independent protein translocase protein (TatC) AVS55_RS19420 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19425 PF02917 Pertussis toxin, subunit 1 AVS55_RS19430 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS55_RS19430 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS55_RS19435 PF09275 Pertussis toxin S4 subunit AVS55_RS19440 PF09276 Pertussis toxin S5 subunit AVS55_RS19445 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS55_RS19445 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS55_RS19450 PF04956 TrbC/VIRB2 family AVS55_RS19455 PF05101 Type IV secretory pathway, VirB3-like protein AVS55_RS19460 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVS55_RS19465 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVS55_RS19475 PF04335 VirB8 protein AVS55_RS19480 PF03524 Conjugal transfer protein AVS55_RS19485 PF03743 Bacterial conjugation TrbI-like protein AVS55_RS19490 PF00437 Type II/IV secretion system protein AVS55_RS19500 PF00892 EamA-like transporter family AVS55_RS19520 PF12631 MnmE helical domain AVS55_RS19520 PF01926 50S ribosome-binding GTPase AVS55_RS19520 PF10396 GTP-binding protein TrmE N-terminus AVS55_RS19525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS19530 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19535 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19535 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS55_RS19540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS19540 PF00005 ABC transporter AVS55_RS19550 PF01960 ArgJ family AVS55_RS19560 PF00293 NUDIX domain AVS55_RS19580 PF02321 Outer membrane efflux protein AVS55_RS19585 PF00873 AcrB/AcrD/AcrF family AVS55_RS19590 PF00873 AcrB/AcrD/AcrF family AVS55_RS19595 PF13533 Biotin-lipoyl like AVS55_RS19600 PF07072 Cell division protein AVS55_RS19605 PF01121 Dephospho-CoA kinase AVS55_RS19610 PF06750 Bacterial Peptidase A24 N-terminal domain AVS55_RS19610 PF01478 Type IV leader peptidase family AVS55_RS19625 PF02569 Pantoate-beta-alanine ligase AVS55_RS19630 PF02616 Segregation and condensation protein ScpA AVS55_RS19640 PF07690 Major Facilitator Superfamily AVS55_RS19645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVS55_RS19645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVS55_RS19655 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19660 PF00005 ABC transporter AVS55_RS19665 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19670 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19675 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS19680 PF00005 ABC transporter AVS55_RS19685 PF18075 FtsX extracellular domain AVS55_RS19690 PF03975 CheD chemotactic sensory transduction AVS55_RS19700 PF14815 NUDIX domain AVS55_RS19700 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS55_RS19700 PF10576 Iron-sulfur binding domain of endonuclease III AVS55_RS19700 PF00633 Helix-hairpin-helix motif AVS55_RS19710 PF08241 Methyltransferase domain AVS55_RS19720 PF02515 CoA-transferase family III AVS55_RS19725 PF02515 CoA-transferase family III AVS55_RS19735 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19740 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS19745 PF00881 Nitroreductase family AVS55_RS19755 PF00682 HMGL-like AVS55_RS19760 PF00378 Enoyl-CoA hydratase/isomerase AVS55_RS19765 PF02515 CoA-transferase family III AVS55_RS19770 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19780 PF00199 Catalase AVS55_RS19780 PF06628 Catalase-related immune-responsive AVS55_RS19785 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19790 PF00005 ABC transporter AVS55_RS19800 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS55_RS19805 PF01546 Peptidase family M20/M25/M40 AVS55_RS19805 PF07687 Peptidase dimerisation domain AVS55_RS19810 PF00005 ABC transporter AVS55_RS19810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS19815 PF00005 ABC transporter AVS55_RS19815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS19820 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19820 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS55_RS19825 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS19835 PF12631 MnmE helical domain AVS55_RS19835 PF10396 GTP-binding protein TrmE N-terminus AVS55_RS19835 PF01926 50S ribosome-binding GTPase AVS55_RS19845 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS19845 PF00072 Response regulator receiver domain AVS55_RS19850 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS19850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS19865 PF01970 Tripartite tricarboxylate transporter TctA family AVS55_RS19870 PF00155 Aminotransferase class I and II AVS55_RS19875 PF00313 'Cold-shock' DNA-binding domain