AVS55_RS00005 PF01134 Glucose inhibited division protein A AVS55_RS00005 PF13932 GidA associated domain 3 AVS55_RS00010 PF02527 rRNA small subunit methyltransferase G AVS55_RS00015 PF13614 AAA domain AVS55_RS00020 PF00583 Acetyltransferase (GNAT) family AVS55_RS00025 PF02195 ParB-like nuclease domain AVS55_RS00030 PF00710 Asparaginase AVS55_RS00055 PF00009 Elongation factor Tu GTP binding domain AVS55_RS00055 PF03143 Elongation factor Tu C-terminal domain AVS55_RS00055 PF03144 Elongation factor Tu domain 2 AVS55_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVS55_RS00070 PF00467 KOW motif AVS55_RS00070 PF02357 Transcription termination factor nusG AVS55_RS00075 PF00298 Ribosomal protein L11, RNA binding domain AVS55_RS00075 PF03946 Ribosomal protein L11, N-terminal domain AVS55_RS00080 PF00687 Ribosomal protein L1p/L10e family AVS55_RS00085 PF00466 Ribosomal protein L10 AVS55_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain AVS55_RS00090 PF16320 AVS55_RS00090 AVS55_RS00095 PF00562 RNA polymerase Rpb2, domain 6 AVS55_RS00095 PF04560 RNA polymerase Rpb2, domain 7 AVS55_RS00095 PF04561 RNA polymerase Rpb2, domain 2 AVS55_RS00095 PF04563 RNA polymerase beta subunit AVS55_RS00095 PF04565 RNA polymerase Rpb2, domain 3 AVS55_RS00095 PF10385 RNA polymerase beta subunit external 1 domain AVS55_RS00100 PF00623 RNA polymerase Rpb1, domain 2 AVS55_RS00100 PF04983 RNA polymerase Rpb1, domain 3 AVS55_RS00100 PF04997 RNA polymerase Rpb1, domain 1 AVS55_RS00100 PF04998 RNA polymerase Rpb1, domain 5 AVS55_RS00100 PF05000 RNA polymerase Rpb1, domain 4 AVS55_RS00120 PF01476 LysM domain AVS55_RS00120 PF04773 FecR protein AVS55_RS00130 PF00072 Response regulator receiver domain AVS55_RS00130 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS00135 PF00665 Integrase core domain AVS55_RS00135 PF13011 AVS55_RS00135 AVS55_RS00140 PF02515 CoA-transferase family III AVS55_RS00145 PF01796 AVS55_RS00145 AVS55_RS00145 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) AVS55_RS00150 PF00108 Thiolase, N-terminal domain AVS55_RS00155 PF01575 MaoC like domain AVS55_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS00160 PF03466 LysR substrate binding domain AVS55_RS00165 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS00170 PF03972 MmgE/PrpD family AVS55_RS00175 PF00665 Integrase core domain AVS55_RS00175 PF13011 AVS55_RS00175 AVS55_RS00180 PF07690 Major Facilitator Superfamily AVS55_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit AVS55_RS00190 PF02092 AVS55_RS00190 AVS55_RS00190 PF05746 DALR anticodon binding domain AVS55_RS00195 PF13242 HAD-hyrolase-like AVS55_RS00200 PF01553 Acyltransferase AVS55_RS00205 PF01863 Protein of unknown function DUF45 AVS55_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS00215 PF01327 Polypeptide deformylase AVS55_RS00220 PF09317 AVS55_RS00220 AVS55_RS00225 PF00665 Integrase core domain AVS55_RS00225 PF13011 AVS55_RS00225 AVS55_RS00240 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS00245 PF03547 AVS55_RS00245 AVS55_RS00250 PF02615 Malate/L-lactate dehydrogenase AVS55_RS00255 PF00665 Integrase core domain AVS55_RS00255 PF13011 AVS55_RS00255 AVS55_RS00265 PF00561 alpha/beta hydrolase fold AVS55_RS00270 PF07021 Methionine biosynthesis protein MetW AVS55_RS00280 PF00665 Integrase core domain AVS55_RS00280 PF13011 AVS55_RS00280 AVS55_RS00285 PF07690 Major Facilitator Superfamily AVS55_RS00295 PF01177 Asp/Glu/Hydantoin racemase AVS55_RS00300 PF00005 ABC transporter AVS55_RS00305 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00310 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00315 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS00320 PF00665 Integrase core domain AVS55_RS00320 PF13011 AVS55_RS00320 AVS55_RS00330 PF07804 HipA-like C-terminal domain AVS55_RS00330 PF07805 HipA-like N-terminal domain AVS55_RS00330 PF13657 HipA N-terminal domain AVS55_RS00335 PF13560 Helix-turn-helix domain AVS55_RS00350 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS00355 PF01965 DJ-1/PfpI family AVS55_RS00360 PF00355 Rieske [2Fe-2S] domain AVS55_RS00365 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS00365 PF00175 Oxidoreductase NAD-binding domain AVS55_RS00365 PF00970 Oxidoreductase FAD-binding domain AVS55_RS00370 PF06808 AVS55_RS00370 AVS55_RS00375 PF04290 AVS55_RS00375 AVS55_RS00380 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS00385 PF00866 Ring hydroxylating beta subunit AVS55_RS00390 PF00665 Integrase core domain AVS55_RS00390 PF13011 AVS55_RS00390 AVS55_RS00395 PF06627 Protein of unknown function (DUF1153) AVS55_RS00400 PF00665 Integrase core domain AVS55_RS00410 PF00183 Hsp90 protein AVS55_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS00415 PF00043 Glutathione S-transferase, C-terminal domain AVS55_RS00415 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS00420 PF01510 N-acetylmuramoyl-L-alanine amidase AVS55_RS00430 PF01578 AVS55_RS00430 AVS55_RS00435 PF00448 SRP54-type protein, GTPase domain AVS55_RS00435 PF02881 SRP54-type protein, helical bundle domain AVS55_RS00435 PF02978 Signal peptide binding domain AVS55_RS00440 PF00665 Integrase core domain AVS55_RS00440 PF13011 AVS55_RS00440 AVS55_RS00445 PF00665 Integrase core domain AVS55_RS00445 PF13011 AVS55_RS00445 AVS55_RS00450 PF02719 Polysaccharide biosynthesis protein AVS55_RS00450 PF13727 CoA-binding domain AVS55_RS00460 PF10997 AVS55_RS00460 AVS55_RS00465 PF00534 Glycosyl transferases group 1 AVS55_RS00465 PF13477 Glycosyl transferase 4-like AVS55_RS00470 PF02397 AVS55_RS00470 AVS55_RS00475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVS55_RS00480 PF13579 Glycosyl transferase 4-like domain AVS55_RS00480 PF13692 Glycosyl transferases group 1 AVS55_RS00485 PF02350 UDP-N-acetylglucosamine 2-epimerase AVS55_RS00490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVS55_RS00495 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS00500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVS55_RS00500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVS55_RS00505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS55_RS00510 PF00534 Glycosyl transferases group 1 AVS55_RS00510 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVS55_RS00520 PF03309 Type III pantothenate kinase AVS55_RS00525 PF02237 Biotin protein ligase C terminal domain AVS55_RS00525 PF03099 Biotin/lipoate A/B protein ligase family AVS55_RS00530 PF02405 AVS55_RS00530 AVS55_RS00535 PF00005 ABC transporter AVS55_RS00540 PF02470 AVS55_RS00540 AVS55_RS00545 PF03886 Protein of unknown function (DUF330) AVS55_RS00555 PF00768 D-alanyl-D-alanine carboxypeptidase AVS55_RS00555 PF07943 Penicillin-binding protein 5, C-terminal domain AVS55_RS00560 PF01063 Aminotransferase class IV AVS55_RS00565 PF04359 Protein of unknown function (DUF493) AVS55_RS00570 PF03099 Biotin/lipoate A/B protein ligase family AVS55_RS00575 PF04055 Radical SAM superfamily AVS55_RS00575 PF16881 AVS55_RS00575 AVS55_RS00580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVS55_RS00585 PF04321 RmlD substrate binding domain AVS55_RS00590 PF16363 AVS55_RS00590 AVS55_RS00595 PF00665 Integrase core domain AVS55_RS00595 PF13011 AVS55_RS00595 AVS55_RS00605 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS55_RS00610 PF00085 Thioredoxin AVS55_RS00610 PF01323 DSBA-like thioredoxin domain AVS55_RS00615 PF05036 Sporulation related domain AVS55_RS00620 PF00750 tRNA synthetases class I (R) AVS55_RS00620 PF03485 Arginyl tRNA synthetase N terminal domain AVS55_RS00620 PF05746 DALR anticodon binding domain AVS55_RS00625 PF08895 AVS55_RS00625 AVS55_RS00635 PF01548 AVS55_RS00635 AVS55_RS00635 PF02371 AVS55_RS00635 AVS55_RS00640 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00645 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00650 PF13416 Bacterial extracellular solute-binding protein AVS55_RS00655 PF00005 ABC transporter AVS55_RS00655 PF08402 TOBE domain AVS55_RS00660 PF00149 Calcineurin-like phosphoesterase AVS55_RS00665 PF00665 Integrase core domain AVS55_RS00665 PF13011 AVS55_RS00665 AVS55_RS00670 PF00005 ABC transporter AVS55_RS00675 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS00685 PF13343 Bacterial extracellular solute-binding protein AVS55_RS00690 PF13377 Periplasmic binding protein-like domain AVS55_RS00695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AVS55_RS00700 PF01425 Amidase AVS55_RS00705 PF00682 HMGL-like AVS55_RS00705 PF08502 LeuA allosteric (dimerisation) domain AVS55_RS00715 PF00309 AVS55_RS00715 AVS55_RS00715 PF04552 Sigma-54, DNA binding domain AVS55_RS00715 PF04963 Sigma-54 factor, core binding domain AVS55_RS00720 PF04324 BFD-like [2Fe-2S] binding domain AVS55_RS00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS00725 PF03466 LysR substrate binding domain AVS55_RS00735 PF00665 Integrase core domain AVS55_RS00735 PF13011 AVS55_RS00735 AVS55_RS00740 PF13609 Gram-negative porin AVS55_RS00745 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS00745 PF00585 C-terminal regulatory domain of Threonine dehydratase AVS55_RS00755 PF01565 FAD binding domain AVS55_RS00755 PF02754 AVS55_RS00755 AVS55_RS00755 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS00755 PF11880 AVS55_RS00755 AVS55_RS00755 PF12447 AVS55_RS00755 AVS55_RS00755 PF13183 4Fe-4S dicluster domain AVS55_RS00760 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS00760 PF07729 FCD domain AVS55_RS00765 PF02515 CoA-transferase family III AVS55_RS00770 PF07859 alpha/beta hydrolase fold AVS55_RS00775 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS00785 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS00790 PF01614 Bacterial transcriptional regulator AVS55_RS00790 PF09339 IclR helix-turn-helix domain AVS55_RS00795 PF03746 LamB/YcsF family AVS55_RS00800 PF02626 Allophanate hydrolase subunit 2 AVS55_RS00805 PF02682 Allophanate hydrolase subunit 1 AVS55_RS00810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS00815 PF03466 LysR substrate binding domain AVS55_RS00820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS55_RS00820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS00825 PF04214 AVS55_RS00825 AVS55_RS00830 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS00830 PF00672 HAMP domain AVS55_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS00835 PF00072 Response regulator receiver domain AVS55_RS00835 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS00840 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS00840 PF11808 AVS55_RS00840 AVS55_RS00845 PF00072 Response regulator receiver domain AVS55_RS00845 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS00850 PF01209 ubiE/COQ5 methyltransferase family AVS55_RS00855 PF04280 Tim44-like domain AVS55_RS00860 PF02036 SCP-2 sterol transfer family AVS55_RS00865 PF03109 AVS55_RS00865 AVS55_RS00875 PF00665 Integrase core domain AVS55_RS00875 PF13011 AVS55_RS00875 AVS55_RS00880 PF00005 ABC transporter AVS55_RS00880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS00885 PF04536 TLP18 AVS55_RS00890 PF04011 LemA family AVS55_RS00895 PF00270 DEAD/DEAH box helicase AVS55_RS00895 PF00271 Helicase conserved C-terminal domain AVS55_RS00900 PF01810 AVS55_RS00900 AVS55_RS00905 PF00009 Elongation factor Tu GTP binding domain AVS55_RS00905 PF03144 Elongation factor Tu domain 2 AVS55_RS00905 PF16658 AVS55_RS00905 AVS55_RS00915 PF00210 Ferritin-like domain AVS55_RS00920 PF00665 Integrase core domain AVS55_RS00920 PF13011 AVS55_RS00920 AVS55_RS00930 PF03724 META domain AVS55_RS00935 PF03724 META domain AVS55_RS00935 PF14302 AVS55_RS00935 AVS55_RS00940 PF00581 Rhodanese-like domain AVS55_RS00945 PF01588 Putative tRNA binding domain AVS55_RS00945 PF09334 tRNA synthetases class I (M) AVS55_RS00955 PF01883 Domain of unknown function DUF59 AVS55_RS00955 PF10609 ParA/MinD ATPase like AVS55_RS00960 PF01103 Surface antigen AVS55_RS00965 PF04357 AVS55_RS00965 AVS55_RS00970 PF00692 dUTPase AVS55_RS00975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS00980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS00985 PF00583 Acetyltransferase (GNAT) family AVS55_RS00995 PF01276 Orn/Lys/Arg decarboxylase, major domain AVS55_RS00995 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AVS55_RS00995 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AVS55_RS01000 PF03486 HI0933-like protein AVS55_RS01005 PF00665 Integrase core domain AVS55_RS01005 PF13011 AVS55_RS01005 AVS55_RS01010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVS55_RS01010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVS55_RS01015 PF02535 AVS55_RS01015 AVS55_RS01020 PF01571 Aminomethyltransferase folate-binding domain AVS55_RS01020 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVS55_RS01025 PF01597 Glycine cleavage H-protein AVS55_RS01030 PF02347 Glycine cleavage system P-protein AVS55_RS01035 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS01035 PF07729 FCD domain AVS55_RS01040 PF02515 CoA-transferase family III AVS55_RS01045 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01050 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS01055 PF00665 Integrase core domain AVS55_RS01055 PF13011 AVS55_RS01055 AVS55_RS01060 PF07769 AVS55_RS01060 AVS55_RS01065 PF04199 Putative cyclase AVS55_RS01070 PF00561 alpha/beta hydrolase fold AVS55_RS01075 PF03795 YCII-related domain AVS55_RS01080 PF02426 Muconolactone delta-isomerase AVS55_RS01085 PF01144 Coenzyme A transferase AVS55_RS01090 PF01144 Coenzyme A transferase AVS55_RS01095 PF01614 Bacterial transcriptional regulator AVS55_RS01095 PF09339 IclR helix-turn-helix domain AVS55_RS01100 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS01105 PF02667 AVS55_RS01105 AVS55_RS01110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS01110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS01115 PF00082 Subtilase family AVS55_RS01115 PF03797 Autotransporter beta-domain AVS55_RS01115 PF12951 AVS55_RS01115 AVS55_RS01120 PF00311 Phosphoenolpyruvate carboxylase AVS55_RS01125 PF06508 Queuosine biosynthesis protein QueC AVS55_RS01130 PF13420 Acetyltransferase (GNAT) domain AVS55_RS01140 PF00665 Integrase core domain AVS55_RS01140 PF13011 AVS55_RS01140 AVS55_RS01150 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS01150 PF07729 FCD domain AVS55_RS01155 PF01565 FAD binding domain AVS55_RS01155 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS01160 PF00171 Aldehyde dehydrogenase family AVS55_RS01165 PF01964 ThiC family AVS55_RS01165 PF13667 ThiC-associated domain AVS55_RS01175 PF09518 HindIII restriction endonuclease AVS55_RS01180 PF00665 Integrase core domain AVS55_RS01180 PF13011 AVS55_RS01180 AVS55_RS01185 PF00665 Integrase core domain AVS55_RS01185 PF13011 AVS55_RS01185 AVS55_RS01190 PF00665 Integrase core domain AVS55_RS01190 PF13011 AVS55_RS01190 AVS55_RS01195 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS01205 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS01210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS01215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS01215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS01220 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS01220 PF07729 FCD domain AVS55_RS01225 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS01230 PF04290 AVS55_RS01230 AVS55_RS01230 PF06808 AVS55_RS01230 AVS55_RS01240 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVS55_RS01250 PF01743 Poly A polymerase head domain AVS55_RS01250 PF12626 Polymerase A arginine-rich C-terminus AVS55_RS01250 PF12627 Probable RNA and SrmB- binding site of polymerase A AVS55_RS01255 PF12710 haloacid dehalogenase-like hydrolase AVS55_RS01260 PF00308 Bacterial dnaA protein AVS55_RS01265 PF00586 AIR synthase related protein, N-terminal domain AVS55_RS01265 PF02769 AIR synthase related protein, C-terminal domain AVS55_RS01270 PF01715 IPP transferase AVS55_RS01275 PF01119 DNA mismatch repair protein, C-terminal domain AVS55_RS01275 PF08676 MutL C terminal dimerisation domain AVS55_RS01275 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS01280 PF09335 AVS55_RS01280 AVS55_RS01285 PF01520 N-acetylmuramoyl-L-alanine amidase AVS55_RS01285 PF11741 AMIN domain AVS55_RS01290 PF02367 Uncharacterised P-loop hydrolase UPF0079 AVS55_RS01295 PF00206 Lyase AVS55_RS01295 PF10415 Fumarase C C-terminus AVS55_RS01300 PF03547 AVS55_RS01300 AVS55_RS01305 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS01310 PF03466 LysR substrate binding domain AVS55_RS01315 PF01019 Gamma-glutamyltranspeptidase AVS55_RS01320 PF02515 CoA-transferase family III AVS55_RS01325 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS01335 PF00665 Integrase core domain AVS55_RS01335 PF13011 AVS55_RS01335 AVS55_RS01340 PF00593 TonB dependent receptor AVS55_RS01345 PF12802 MarR family AVS55_RS01350 PF01654 AVS55_RS01350 AVS55_RS01355 PF02322 AVS55_RS01355 AVS55_RS01360 PF08173 AVS55_RS01360 AVS55_RS01365 PF00005 ABC transporter AVS55_RS01365 PF00664 ABC transporter transmembrane region AVS55_RS01370 PF00005 ABC transporter AVS55_RS01370 PF00664 ABC transporter transmembrane region AVS55_RS01375 PF00156 Phosphoribosyl transferase domain AVS55_RS01385 PF13663 AVS55_RS01385 AVS55_RS01390 PF13609 Gram-negative porin AVS55_RS01395 PF00665 Integrase core domain AVS55_RS01395 PF13011 AVS55_RS01395 AVS55_RS01405 PF13986 AVS55_RS01405 AVS55_RS01420 PF04386 Stringent starvation protein B AVS55_RS01425 PF13410 Glutathione S-transferase, C-terminal domain AVS55_RS01425 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS01430 PF02167 Cytochrome C1 family AVS55_RS01435 PF00032 Cytochrome b(C-terminal)/b6/petD AVS55_RS01435 PF00033 Cytochrome b(N-terminal)/b6/petB AVS55_RS01440 PF00355 Rieske [2Fe-2S] domain AVS55_RS01445 PF01741 Large-conductance mechanosensitive channel, MscL AVS55_RS01450 PF01784 NIF3 (NGG1p interacting factor 3) AVS55_RS01455 PF13180 PDZ domain AVS55_RS01455 PF13365 Trypsin-like peptidase domain AVS55_RS01460 PF00665 Integrase core domain AVS55_RS01460 PF13011 AVS55_RS01460 AVS55_RS01465 PF04299 Putative FMN-binding domain AVS55_RS01470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS01475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS01480 PF07859 alpha/beta hydrolase fold AVS55_RS01485 PF02311 AraC-like ligand binding domain AVS55_RS01485 PF12833 Helix-turn-helix domain AVS55_RS01490 PF00682 HMGL-like AVS55_RS01495 PF02311 AraC-like ligand binding domain AVS55_RS01495 PF12833 Helix-turn-helix domain AVS55_RS01500 PF00920 Dehydratase family AVS55_RS01505 PF07690 Major Facilitator Superfamily AVS55_RS01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS01510 PF03466 LysR substrate binding domain AVS55_RS01520 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AVS55_RS01525 PF00665 Integrase core domain AVS55_RS01525 PF13011 AVS55_RS01525 AVS55_RS01535 PF00665 Integrase core domain AVS55_RS01535 PF13011 AVS55_RS01535 AVS55_RS01545 PF01047 MarR family AVS55_RS01550 PF07859 alpha/beta hydrolase fold AVS55_RS01555 PF13458 Periplasmic binding protein AVS55_RS01560 PF02653 AVS55_RS01560 AVS55_RS01565 PF02653 AVS55_RS01565 AVS55_RS01570 PF00005 ABC transporter AVS55_RS01570 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS01575 PF00005 ABC transporter AVS55_RS01590 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS01595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS01595 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS01595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS01600 PF00501 AMP-binding enzyme AVS55_RS01600 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS01605 PF13279 Thioesterase-like superfamily AVS55_RS01610 PF01042 Endoribonuclease L-PSP AVS55_RS01615 PF03961 AVS55_RS01615 AVS55_RS01620 PF00202 Aminotransferase class-III AVS55_RS01625 PF02581 Thiamine monophosphate synthase/TENI AVS55_RS01630 PF08543 Phosphomethylpyrimidine kinase AVS55_RS01635 PF00301 Rubredoxin AVS55_RS01640 PF02622 Uncharacterized ACR, COG1678 AVS55_RS01645 PF03652 Uncharacterised protein family (UPF0081) AVS55_RS01650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS55_RS01650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS55_RS01655 PF01979 Amidohydrolase family AVS55_RS01660 PF01553 Acyltransferase AVS55_RS01665 PF00149 Calcineurin-like phosphoesterase AVS55_RS01670 PF03739 AVS55_RS01670 AVS55_RS01675 PF00912 Transglycosylase AVS55_RS01680 PF00665 Integrase core domain AVS55_RS01680 PF13011 AVS55_RS01680 AVS55_RS01690 PF00501 AMP-binding enzyme AVS55_RS01690 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS01695 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01700 PF01796 AVS55_RS01700 AVS55_RS01700 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) AVS55_RS01710 PF12706 Beta-lactamase superfamily domain AVS55_RS01715 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS01725 PF03466 LysR substrate binding domain AVS55_RS01730 PF11737 AVS55_RS01730 AVS55_RS01735 PF11453 AVS55_RS01735 AVS55_RS01740 PF00990 GGDEF domain AVS55_RS01745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVS55_RS01750 PF13532 2OG-Fe(II) oxygenase superfamily AVS55_RS01755 PF09859 AVS55_RS01755 AVS55_RS01760 PF04463 AVS55_RS01760 AVS55_RS01765 PF00005 ABC transporter AVS55_RS01770 PF01032 FecCD transport family AVS55_RS01775 PF01497 Periplasmic binding protein AVS55_RS01780 PF05171 Haemin-degrading HemS AVS55_RS01785 PF00593 TonB dependent receptor AVS55_RS01785 PF07660 Secretin and TonB N terminus short domain AVS55_RS01785 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS01790 PF04773 FecR protein AVS55_RS01790 PF16220 AVS55_RS01790 AVS55_RS01795 PF04542 Sigma-70 region 2 AVS55_RS01795 PF08281 Sigma-70, region 4 AVS55_RS01805 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS01815 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS01820 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVS55_RS01825 PF00665 Integrase core domain AVS55_RS01825 PF13011 AVS55_RS01825 AVS55_RS01830 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS01830 PF07729 FCD domain AVS55_RS01835 PF01925 AVS55_RS01835 AVS55_RS01845 PF14518 Iron-containing redox enzyme AVS55_RS01850 PF00171 Aldehyde dehydrogenase family AVS55_RS01855 PF03928 Domain of unknown function (DUF336) AVS55_RS01860 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS01860 PF00175 Oxidoreductase NAD-binding domain AVS55_RS01860 PF00970 Oxidoreductase FAD-binding domain AVS55_RS01865 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS01870 PF10282 Lactonase, 7-bladed beta-propeller AVS55_RS01875 PF00665 Integrase core domain AVS55_RS01875 PF13011 AVS55_RS01875 AVS55_RS01880 PF00582 Universal stress protein family AVS55_RS01885 PF03458 AVS55_RS01885 AVS55_RS01890 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVS55_RS01890 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVS55_RS01895 PF03372 Endonuclease/Exonuclease/phosphatase family AVS55_RS01900 PF00156 Phosphoribosyl transferase domain AVS55_RS01905 PF02637 GatB domain AVS55_RS01905 PF02934 GatB/GatE catalytic domain AVS55_RS01910 PF01425 Amidase AVS55_RS01915 PF02686 Glu-tRNAGln amidotransferase C subunit AVS55_RS01920 PF06723 MreB/Mbl protein AVS55_RS01925 PF04085 rod shape-determining protein MreC AVS55_RS01930 PF04093 AVS55_RS01930 AVS55_RS01935 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS01935 PF03717 Penicillin-binding Protein dimerisation domain AVS55_RS01940 PF01098 AVS55_RS01940 AVS55_RS01945 PF02615 Malate/L-lactate dehydrogenase AVS55_RS01950 PF00939 Sodium:sulfate symporter transmembrane region AVS55_RS01955 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS01960 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS01965 PF00696 Amino acid kinase family AVS55_RS01970 PF03180 NLPA lipoprotein AVS55_RS01975 PF08534 Redoxin AVS55_RS01980 PF04972 BON domain AVS55_RS01985 PF13580 SIS domain AVS55_RS01995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS55_RS02000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVS55_RS02005 PF00665 Integrase core domain AVS55_RS02005 PF13011 AVS55_RS02005 AVS55_RS02015 PF00462 Glutaredoxin AVS55_RS02020 PF02515 CoA-transferase family III AVS55_RS02025 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02030 PF02515 CoA-transferase family III AVS55_RS02045 PF01614 Bacterial transcriptional regulator AVS55_RS02045 PF09339 IclR helix-turn-helix domain AVS55_RS02050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS02055 PF00665 Integrase core domain AVS55_RS02055 PF13011 AVS55_RS02055 AVS55_RS02060 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02065 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS02070 PF02515 CoA-transferase family III AVS55_RS02075 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS02075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS02075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02080 PF03466 LysR substrate binding domain AVS55_RS02085 PF00581 Rhodanese-like domain AVS55_RS02090 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02100 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02105 PF00665 Integrase core domain AVS55_RS02105 PF13011 AVS55_RS02105 AVS55_RS02110 PF00892 EamA-like transporter family AVS55_RS02115 PF01810 AVS55_RS02115 AVS55_RS02120 PF12146 Putative lysophospholipase AVS55_RS02125 PF05232 AVS55_RS02125 AVS55_RS02130 PF04794 YdjC-like protein AVS55_RS02135 PF04138 AVS55_RS02135 AVS55_RS02140 PF13231 AVS55_RS02140 AVS55_RS02145 PF00535 Glycosyl transferase family 2 AVS55_RS02150 PF00583 Acetyltransferase (GNAT) family AVS55_RS02160 PF00665 Integrase core domain AVS55_RS02160 PF13011 AVS55_RS02160 AVS55_RS02165 PF03616 AVS55_RS02165 AVS55_RS02170 PF16868 AVS55_RS02170 AVS55_RS02175 PF02667 AVS55_RS02175 AVS55_RS02190 PF00929 Exonuclease AVS55_RS02195 PF00873 AcrB/AcrD/AcrF family AVS55_RS02200 PF00665 Integrase core domain AVS55_RS02200 PF13011 AVS55_RS02200 AVS55_RS02205 PF01989 Protein of unknown function DUF126 AVS55_RS02210 PF04412 AVS55_RS02210 AVS55_RS02215 PF04412 AVS55_RS02215 AVS55_RS02220 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02225 PF03466 LysR substrate binding domain AVS55_RS02230 PF01565 FAD binding domain AVS55_RS02230 PF09330 D-lactate dehydrogenase, membrane binding AVS55_RS02235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02235 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS02240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02240 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS02245 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02250 PF01546 Peptidase family M20/M25/M40 AVS55_RS02250 PF07687 Peptidase dimerisation domain AVS55_RS02255 PF06267 Family of unknown function (DUF1028) AVS55_RS02260 PF01042 Endoribonuclease L-PSP AVS55_RS02265 PF13738 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS02270 PF00107 Zinc-binding dehydrogenase AVS55_RS02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02275 PF03466 LysR substrate binding domain AVS55_RS02280 PF13380 CoA binding domain AVS55_RS02280 PF13549 ATP-grasp domain AVS55_RS02280 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS02285 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS02290 PF09084 NMT1/THI5 like AVS55_RS02295 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02300 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS02305 PF01380 SIS domain AVS55_RS02305 PF13522 Glutamine amidotransferase domain AVS55_RS02310 PF01037 AsnC family AVS55_RS02310 PF13412 Winged helix-turn-helix DNA-binding AVS55_RS02315 PF00108 Thiolase, N-terminal domain AVS55_RS02315 PF02803 Thiolase, C-terminal domain AVS55_RS02320 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS02320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS02320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS02325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02325 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02330 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02335 PF13380 CoA binding domain AVS55_RS02335 PF13549 ATP-grasp domain AVS55_RS02335 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS02340 PF00285 Citrate synthase AVS55_RS02345 PF01614 Bacterial transcriptional regulator AVS55_RS02345 PF09339 IclR helix-turn-helix domain AVS55_RS02350 PF00384 Molybdopterin oxidoreductase AVS55_RS02350 PF01568 Molydopterin dinucleotide binding domain AVS55_RS02355 PF00665 Integrase core domain AVS55_RS02355 PF13011 AVS55_RS02355 AVS55_RS02360 PF00665 Integrase core domain AVS55_RS02360 PF13011 AVS55_RS02360 AVS55_RS02370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVS55_RS02370 PF01488 Shikimate / quinate 5-dehydrogenase AVS55_RS02370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVS55_RS02375 PF00472 RF-1 domain AVS55_RS02375 PF03462 PCRF domain AVS55_RS02380 PF05175 Methyltransferase small domain AVS55_RS02385 PF00462 Glutaredoxin AVS55_RS02390 PF02441 Flavoprotein AVS55_RS02395 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02400 PF09084 NMT1/THI5 like AVS55_RS02405 PF00941 FAD binding domain in molybdopterin dehydrogenase AVS55_RS02405 PF01799 [2Fe-2S] binding domain AVS55_RS02405 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVS55_RS02410 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVS55_RS02410 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS55_RS02415 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) AVS55_RS02425 PF00665 Integrase core domain AVS55_RS02425 PF13011 AVS55_RS02425 AVS55_RS02430 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AVS55_RS02430 PF05036 Sporulation related domain AVS55_RS02435 PF03668 AVS55_RS02435 AVS55_RS02445 PF00034 Cytochrome c AVS55_RS02445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS02450 PF02603 HPr Serine kinase N terminus AVS55_RS02450 PF07475 HPr Serine kinase C-terminal domain AVS55_RS02455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVS55_RS02460 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVS55_RS02465 PF00005 ABC transporter AVS55_RS02465 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS02470 PF03968 OstA-like protein AVS55_RS02475 PF06835 Lipopolysaccharide-assembly, LptC-related AVS55_RS02480 PF08282 haloacid dehalogenase-like hydrolase AVS55_RS02485 PF00571 CBS domain AVS55_RS02485 PF01380 SIS domain AVS55_RS02490 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS02490 PF02222 ATP-grasp domain AVS55_RS02495 PF00593 TonB dependent receptor AVS55_RS02495 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS02500 PF00665 Integrase core domain AVS55_RS02500 PF13011 AVS55_RS02500 AVS55_RS02505 PF00732 GMC oxidoreductase AVS55_RS02505 PF05199 GMC oxidoreductase AVS55_RS02510 PF07399 AVS55_RS02510 AVS55_RS02515 PF09723 AVS55_RS02515 AVS55_RS02520 PF04367 AVS55_RS02520 AVS55_RS02525 PF00152 tRNA synthetases class II (D, K and N) AVS55_RS02525 PF01336 OB-fold nucleic acid binding domain AVS55_RS02525 PF02938 GAD domain AVS55_RS02530 PF03372 Endonuclease/Exonuclease/phosphatase family AVS55_RS02535 PF13091 PLD-like domain AVS55_RS02540 PF00892 EamA-like transporter family AVS55_RS02550 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) AVS55_RS02555 PF00665 Integrase core domain AVS55_RS02555 PF13011 AVS55_RS02555 AVS55_RS02560 PF13458 Periplasmic binding protein AVS55_RS02565 PF01425 Amidase AVS55_RS02570 PF05995 Cysteine dioxygenase type I AVS55_RS02575 PF01614 Bacterial transcriptional regulator AVS55_RS02575 PF09339 IclR helix-turn-helix domain AVS55_RS02580 PF02515 CoA-transferase family III AVS55_RS02585 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS02590 PF05275 AVS55_RS02590 AVS55_RS02595 PF00394 Multicopper oxidase AVS55_RS02595 PF07731 Multicopper oxidase AVS55_RS02595 PF07732 Multicopper oxidase AVS55_RS02600 PF00127 Copper binding proteins, plastocyanin/azurin family AVS55_RS02605 PF00665 Integrase core domain AVS55_RS02605 PF13011 AVS55_RS02605 AVS55_RS02610 PF00665 Integrase core domain AVS55_RS02610 PF13011 AVS55_RS02610 AVS55_RS02620 PF00665 Integrase core domain AVS55_RS02620 PF13011 AVS55_RS02620 AVS55_RS02625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS02625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS02630 PF02515 CoA-transferase family III AVS55_RS02635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02635 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS02640 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS02645 PF03060 Nitronate monooxygenase AVS55_RS02650 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS02655 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS02660 PF01256 Carbohydrate kinase AVS55_RS02675 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS55_RS02680 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS02685 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS02690 PF00005 ABC transporter AVS55_RS02690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS02700 PF01546 Peptidase family M20/M25/M40 AVS55_RS02700 PF07687 Peptidase dimerisation domain AVS55_RS02705 PF00665 Integrase core domain AVS55_RS02705 PF13011 AVS55_RS02705 AVS55_RS02710 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS02710 PF13361 UvrD-like helicase C-terminal domain AVS55_RS02715 PF00270 DEAD/DEAH box helicase AVS55_RS02715 PF00271 Helicase conserved C-terminal domain AVS55_RS02720 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVS55_RS02725 PF02954 Bacterial regulatory protein, Fis family AVS55_RS02730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVS55_RS02735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS02735 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS55_RS02740 PF00231 ATP synthase AVS55_RS02745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS02745 PF00306 ATP synthase alpha/beta chain, C terminal domain AVS55_RS02745 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS55_RS02750 PF00213 ATP synthase delta (OSCP) subunit AVS55_RS02755 PF00430 ATP synthase B/B' CF(0) AVS55_RS02760 PF00137 ATP synthase subunit C AVS55_RS02765 PF00119 ATP synthase A chain AVS55_RS02770 PF03899 AVS55_RS02770 AVS55_RS02775 PF06742 Protein of unknown function (DUF1214) AVS55_RS02780 PF00665 Integrase core domain AVS55_RS02780 PF13011 AVS55_RS02780 AVS55_RS02785 PF06863 Protein of unknown function (DUF1254) AVS55_RS02790 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS02795 PF05299 M61 glycyl aminopeptidase AVS55_RS02795 PF13180 PDZ domain AVS55_RS02800 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS02805 PF02152 Dihydroneopterin aldolase AVS55_RS02810 PF01171 PP-loop family AVS55_RS02815 PF00665 Integrase core domain AVS55_RS02815 PF13011 AVS55_RS02815 AVS55_RS02820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS55_RS02820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS02825 PF10411 Disulfide bond isomerase protein N-terminus AVS55_RS02825 PF13098 Thioredoxin-like domain AVS55_RS02830 PF01494 FAD binding domain AVS55_RS02835 PF03562 MltA specific insert domain AVS55_RS02835 PF06725 3D domain AVS55_RS02840 PF04379 Protein of unknown function (DUF525) AVS55_RS02845 PF00834 Ribulose-phosphate 3 epimerase family AVS55_RS02850 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS02855 PF00425 chorismate binding enzyme AVS55_RS02855 PF04715 Anthranilate synthase component I, N terminal region AVS55_RS02860 PF00117 Glutamine amidotransferase class-I AVS55_RS02865 PF00591 Glycosyl transferase family, a/b domain AVS55_RS02865 PF02885 Glycosyl transferase family, helical bundle domain AVS55_RS02870 PF00218 Indole-3-glycerol phosphate synthase AVS55_RS02875 PF00665 Integrase core domain AVS55_RS02875 PF13011 AVS55_RS02875 AVS55_RS02885 PF00665 Integrase core domain AVS55_RS02885 PF13011 AVS55_RS02885 AVS55_RS02890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS02890 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02895 PF03466 LysR substrate binding domain AVS55_RS02900 PF00551 Formyl transferase AVS55_RS02900 PF01842 ACT domain AVS55_RS02905 PF01266 FAD dependent oxidoreductase AVS55_RS02910 PF01613 Flavin reductase like domain AVS55_RS02915 PF01243 Pyridoxamine 5'-phosphate oxidase AVS55_RS02915 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVS55_RS02920 PF04752 AVS55_RS02920 AVS55_RS02925 PF07690 Major Facilitator Superfamily AVS55_RS02930 PF00899 ThiF family AVS55_RS02935 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS02935 PF07702 UTRA domain AVS55_RS02940 PF00501 AMP-binding enzyme AVS55_RS02940 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS02945 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS02950 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS02955 PF01548 AVS55_RS02955 AVS55_RS02955 PF02371 AVS55_RS02955 AVS55_RS02960 PF01063 Aminotransferase class IV AVS55_RS02965 PF00425 chorismate binding enzyme AVS55_RS02970 PF00005 ABC transporter AVS55_RS02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS02980 PF03466 LysR substrate binding domain AVS55_RS02985 PF00535 Glycosyl transferase family 2 AVS55_RS02990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS02995 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS03005 PF00892 EamA-like transporter family AVS55_RS03010 PF00005 ABC transporter AVS55_RS03015 PF00857 Isochorismatase family AVS55_RS03020 PF05433 AVS55_RS03020 AVS55_RS03025 PF01548 AVS55_RS03025 AVS55_RS03025 PF02371 AVS55_RS03025 AVS55_RS03030 PF03776 Septum formation topological specificity factor MinE AVS55_RS03035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVS55_RS03040 PF03775 Septum formation inhibitor MinC, C-terminal domain AVS55_RS03040 PF05209 Septum formation inhibitor MinC, N-terminal domain AVS55_RS03045 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVS55_RS03045 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AVS55_RS03050 PF01654 AVS55_RS03050 AVS55_RS03055 PF02322 AVS55_RS03055 AVS55_RS03060 PF00672 HAMP domain AVS55_RS03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS03065 PF00072 Response regulator receiver domain AVS55_RS03065 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS03075 PF00665 Integrase core domain AVS55_RS03075 PF13011 AVS55_RS03075 AVS55_RS03080 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS03085 PF04391 AVS55_RS03085 AVS55_RS03090 PF02566 OsmC-like protein AVS55_RS03095 PF01548 AVS55_RS03095 AVS55_RS03095 PF02371 AVS55_RS03095 AVS55_RS03100 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS03105 PF01464 Transglycosylase SLT domain AVS55_RS03105 PF01476 LysM domain AVS55_RS03110 PF00753 Metallo-beta-lactamase superfamily AVS55_RS03110 PF16123 AVS55_RS03110 AVS55_RS03115 PF08241 Methyltransferase domain AVS55_RS03120 PF00075 RNase H AVS55_RS03125 PF00665 Integrase core domain AVS55_RS03125 PF13011 AVS55_RS03125 AVS55_RS03130 PF00732 GMC oxidoreductase AVS55_RS03140 PF00487 AVS55_RS03140 AVS55_RS03160 PF00665 Integrase core domain AVS55_RS03160 PF13011 AVS55_RS03160 AVS55_RS03165 PF13460 NADH(P)-binding AVS55_RS03170 PF01575 MaoC like domain AVS55_RS03170 PF13452 N-terminal half of MaoC dehydratase AVS55_RS03175 PF02803 Thiolase, C-terminal domain AVS55_RS03180 PF01796 AVS55_RS03180 AVS55_RS03180 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) AVS55_RS03185 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS03190 PF00106 short chain dehydrogenase AVS55_RS03195 PF13458 Periplasmic binding protein AVS55_RS03200 PF00005 ABC transporter AVS55_RS03200 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS03205 PF00005 ABC transporter AVS55_RS03210 PF02653 AVS55_RS03210 AVS55_RS03215 PF02653 AVS55_RS03215 AVS55_RS03220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS03220 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS03220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS03225 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS03230 PF00501 AMP-binding enzyme AVS55_RS03230 PF14535 AMP-binding enzyme C-terminal domain AVS55_RS03235 PF02515 CoA-transferase family III AVS55_RS03240 PF00106 short chain dehydrogenase AVS55_RS03245 PF00665 Integrase core domain AVS55_RS03245 PF13011 AVS55_RS03245 AVS55_RS03255 PF04285 AVS55_RS03255 AVS55_RS03260 PF04293 AVS55_RS03260 AVS55_RS03265 PF07690 Major Facilitator Superfamily AVS55_RS03270 PF03972 MmgE/PrpD family AVS55_RS03275 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS03280 PF05034 Methylaspartate ammonia-lyase N-terminus AVS55_RS03280 PF07476 Methylaspartate ammonia-lyase C-terminus AVS55_RS03285 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS03285 PF07702 UTRA domain AVS55_RS03295 PF04828 Glutathione-dependent formaldehyde-activating enzyme AVS55_RS03300 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS03305 PF00376 MerR family regulatory protein AVS55_RS03305 PF09278 MerR, DNA binding AVS55_RS03310 PF01774 UreD urease accessory protein AVS55_RS03315 PF00547 Urease, gamma subunit AVS55_RS03320 PF04955 AVS55_RS03320 AVS55_RS03325 PF00699 Urease beta subunit AVS55_RS03330 PF00449 Urease alpha-subunit, N-terminal domain AVS55_RS03330 PF01979 Amidohydrolase family AVS55_RS03335 PF02814 UreE urease accessory protein, N-terminal domain AVS55_RS03335 PF05194 UreE urease accessory protein, C-terminal domain AVS55_RS03340 PF01730 UreF AVS55_RS03345 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS55_RS03350 PF00665 Integrase core domain AVS55_RS03350 PF13011 AVS55_RS03350 AVS55_RS03355 PF07171 MlrC C-terminus AVS55_RS03355 PF07364 Protein of unknown function (DUF1485) AVS55_RS03365 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS03370 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS03375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS03385 PF00202 Aminotransferase class-III AVS55_RS03390 PF00155 Aminotransferase class I and II AVS55_RS03390 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS03395 PF00186 Dihydrofolate reductase AVS55_RS03400 PF00303 Thymidylate synthase AVS55_RS03405 PF02566 OsmC-like protein AVS55_RS03410 PF03232 AVS55_RS03410 AVS55_RS03415 PF00953 Glycosyl transferase family 4 AVS55_RS03420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS55_RS03420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS55_RS03420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS55_RS03425 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS03430 PF03023 AVS55_RS03430 AVS55_RS03435 PF00534 Glycosyl transferases group 1 AVS55_RS03435 PF13439 Glycosyltransferase Family 4 AVS55_RS03440 PF00733 Asparagine synthase AVS55_RS03440 PF13537 Glutamine amidotransferase domain AVS55_RS03445 PF00534 Glycosyl transferases group 1 AVS55_RS03445 PF13579 Glycosyl transferase 4-like domain AVS55_RS03450 PF13439 Glycosyltransferase Family 4 AVS55_RS03450 PF13692 Glycosyl transferases group 1 AVS55_RS03455 PF00534 Glycosyl transferases group 1 AVS55_RS03455 PF13477 Glycosyl transferase 4-like AVS55_RS03460 PF00342 Phosphoglucose isomerase AVS55_RS03465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS55_RS03465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS55_RS03465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS55_RS03465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS55_RS03470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS03475 PF01565 FAD binding domain AVS55_RS03475 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS03480 PF00072 Response regulator receiver domain AVS55_RS03480 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS03485 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS03485 PF00672 HAMP domain AVS55_RS03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS03490 PF00884 Sulfatase AVS55_RS03495 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS55_RS03495 PF09298 Fumarylacetoacetase N-terminal AVS55_RS03500 PF04209 homogentisate 1,2-dioxygenase AVS55_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS03505 PF03466 LysR substrate binding domain AVS55_RS03510 PF10932 AVS55_RS03510 AVS55_RS03515 PF01494 FAD binding domain AVS55_RS03520 PF00753 Metallo-beta-lactamase superfamily AVS55_RS03525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVS55_RS03525 PF06827 Zinc finger found in FPG and IleRS AVS55_RS03525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVS55_RS03530 PF13432 Tetratricopeptide repeat AVS55_RS03530 PF14559 Tetratricopeptide repeat AVS55_RS03535 PF03550 Outer membrane lipoprotein LolB AVS55_RS03540 PF00288 GHMP kinases N terminal domain AVS55_RS03540 PF08544 GHMP kinases C terminal AVS55_RS03550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVS55_RS03550 PF14572 Phosphoribosyl synthetase-associated domain AVS55_RS03555 PF01386 Ribosomal L25p family AVS55_RS03555 PF14693 Ribosomal protein TL5, C-terminal domain AVS55_RS03560 PF01195 Peptidyl-tRNA hydrolase AVS55_RS03565 PF02517 CAAX protease self-immunity AVS55_RS03570 PF01926 50S ribosome-binding GTPase AVS55_RS03570 PF06071 Protein of unknown function (DUF933) AVS55_RS03575 PF00589 Phage integrase family AVS55_RS03575 PF13356 Domain of unknown function (DUF4102) AVS55_RS03575 PF14659 Phage integrase, N-terminal SAM-like domain AVS55_RS03580 PF02661 Fic/DOC family AVS55_RS03590 PF04851 Type III restriction enzyme, res subunit AVS55_RS03595 PF01555 DNA methylase AVS55_RS03600 PF13304 AAA domain AVS55_RS03610 PF00665 Integrase core domain AVS55_RS03610 PF13011 AVS55_RS03610 AVS55_RS03615 PF14103 AVS55_RS03615 AVS55_RS03630 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS03635 PF13361 UvrD-like helicase C-terminal domain AVS55_RS03640 PF12835 Integrase AVS55_RS03645 PF00665 Integrase core domain AVS55_RS03645 PF13011 AVS55_RS03645 AVS55_RS03655 PF03797 Autotransporter beta-domain AVS55_RS03655 PF12951 AVS55_RS03655 AVS55_RS03660 PF12951 AVS55_RS03660 AVS55_RS03660 PF13018 AVS55_RS03660 AVS55_RS03665 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS03675 PF00665 Integrase core domain AVS55_RS03675 PF13011 AVS55_RS03675 AVS55_RS03680 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS03695 PF00665 Integrase core domain AVS55_RS03695 PF13011 AVS55_RS03695 AVS55_RS03705 PF07883 Cupin domain AVS55_RS03705 PF13411 MerR HTH family regulatory protein AVS55_RS03705 PF13560 Helix-turn-helix domain AVS55_RS03710 PF01266 FAD dependent oxidoreductase AVS55_RS03715 PF05899 Protein of unknown function (DUF861) AVS55_RS03720 PF01019 Gamma-glutamyltranspeptidase AVS55_RS03725 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS03730 PF13531 Bacterial extracellular solute-binding protein AVS55_RS03735 PF01810 AVS55_RS03735 AVS55_RS03745 PF00665 Integrase core domain AVS55_RS03745 PF13011 AVS55_RS03745 AVS55_RS03750 PF01037 AsnC family AVS55_RS03750 PF13404 AsnC-type helix-turn-helix domain AVS55_RS03765 PF13663 AVS55_RS03765 AVS55_RS03775 PF07336 Protein of unknown function (DUF1470) AVS55_RS03775 PF11706 CGNR zinc finger AVS55_RS03780 PF00561 alpha/beta hydrolase fold AVS55_RS03785 PF13531 Bacterial extracellular solute-binding protein AVS55_RS03790 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS03795 PF00005 ABC transporter AVS55_RS03795 PF03459 TOBE domain AVS55_RS03800 PF13091 PLD-like domain AVS55_RS03805 PF00665 Integrase core domain AVS55_RS03805 PF13011 AVS55_RS03805 AVS55_RS03810 PF03167 Uracil DNA glycosylase superfamily AVS55_RS03815 PF00270 DEAD/DEAH box helicase AVS55_RS03815 PF00271 Helicase conserved C-terminal domain AVS55_RS03815 PF08017 AVS55_RS03815 AVS55_RS03820 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase AVS55_RS03825 PF01743 Poly A polymerase head domain AVS55_RS03825 PF12627 Probable RNA and SrmB- binding site of polymerase A AVS55_RS03830 PF01464 Transglycosylase SLT domain AVS55_RS03830 PF14718 Soluble lytic murein transglycosylase L domain AVS55_RS03835 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVS55_RS03840 PF00083 Sugar (and other) transporter AVS55_RS03845 PF00850 Histone deacetylase domain AVS55_RS03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS03850 PF03466 LysR substrate binding domain AVS55_RS03855 PF00665 Integrase core domain AVS55_RS03855 PF13011 AVS55_RS03855 AVS55_RS03860 PF02219 Methylenetetrahydrofolate reductase AVS55_RS03865 PF04020 AVS55_RS03865 AVS55_RS03870 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVS55_RS03870 PF05221 S-adenosyl-L-homocysteine hydrolase AVS55_RS03875 PF13439 Glycosyltransferase Family 4 AVS55_RS03875 PF13692 Glycosyl transferases group 1 AVS55_RS03880 PF06945 AVS55_RS03880 AVS55_RS03885 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVS55_RS03885 PF02772 S-adenosylmethionine synthetase, central domain AVS55_RS03885 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVS55_RS03890 PF03279 AVS55_RS03890 AVS55_RS03895 PF03279 AVS55_RS03895 AVS55_RS03900 PF01678 Diaminopimelate epimerase AVS55_RS03905 PF04340 Protein of unknown function, DUF484 AVS55_RS03910 PF00589 Phage integrase family AVS55_RS03910 PF02899 Phage integrase, N-terminal SAM-like domain AVS55_RS03915 PF00593 TonB dependent receptor AVS55_RS03915 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS03920 PF03824 AVS55_RS03920 AVS55_RS03925 PF06226 AVS55_RS03925 AVS55_RS03930 PF01297 Periplasmic solute binding protein family AVS55_RS03935 PF00950 AVS55_RS03935 AVS55_RS03940 PF00005 ABC transporter AVS55_RS03950 PF01475 Ferric uptake regulator family AVS55_RS03955 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS55_RS03955 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVS55_RS03960 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVS55_RS03965 PF00227 Proteasome subunit AVS55_RS03970 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS03970 PF07724 AAA domain (Cdc48 subfamily) AVS55_RS03970 PF10431 C-terminal, D2-small domain, of ClpB protein AVS55_RS03975 PF11604 Copper binding periplasmic protein CusF AVS55_RS03980 PF01923 Cobalamin adenosyltransferase AVS55_RS03985 PF00665 Integrase core domain AVS55_RS03985 PF13011 AVS55_RS03985 AVS55_RS03990 PF00665 Integrase core domain AVS55_RS03990 PF13011 AVS55_RS03990 AVS55_RS03995 PF02525 Flavodoxin-like fold AVS55_RS04000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS04000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS04005 PF01019 Gamma-glutamyltranspeptidase AVS55_RS04010 PF01970 AVS55_RS04010 AVS55_RS04015 PF07331 AVS55_RS04015 AVS55_RS04020 PF00665 Integrase core domain AVS55_RS04020 PF13011 AVS55_RS04020 AVS55_RS04030 PF05164 Cell division protein ZapA AVS55_RS04040 PF00665 Integrase core domain AVS55_RS04040 PF13011 AVS55_RS04040 AVS55_RS04045 PF04402 Protein of unknown function (DUF541) AVS55_RS04050 PF01790 AVS55_RS04050 AVS55_RS04055 PF00920 Dehydratase family AVS55_RS04060 PF00034 Cytochrome c AVS55_RS04065 PF01625 Peptide methionine sulfoxide reductase AVS55_RS04070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS04070 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AVS55_RS04075 PF01037 AsnC family AVS55_RS04075 PF13412 Winged helix-turn-helix DNA-binding AVS55_RS04110 PF02201 SWIB/MDM2 domain AVS55_RS04115 PF01546 Peptidase family M20/M25/M40 AVS55_RS04115 PF07687 Peptidase dimerisation domain AVS55_RS04120 PF01979 Amidohydrolase family AVS55_RS04125 PF00005 ABC transporter AVS55_RS04125 PF12848 ABC transporter AVS55_RS04125 PF16326 AVS55_RS04125 AVS55_RS04135 PF02381 MraZ protein AVS55_RS04140 PF01795 MraW methylase family AVS55_RS04145 PF04999 AVS55_RS04145 AVS55_RS04150 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS04150 PF03717 Penicillin-binding Protein dimerisation domain AVS55_RS04155 PF01225 Mur ligase family, catalytic domain AVS55_RS04155 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS04155 PF08245 Mur ligase middle domain AVS55_RS04160 PF00953 Glycosyl transferase family 4 AVS55_RS04165 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS04165 PF08245 Mur ligase middle domain AVS55_RS04170 PF01098 AVS55_RS04170 AVS55_RS04175 PF03033 Glycosyltransferase family 28 N-terminal domain AVS55_RS04175 PF04101 Glycosyltransferase family 28 C-terminal domain AVS55_RS04180 PF01225 Mur ligase family, catalytic domain AVS55_RS04180 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS04180 PF08245 Mur ligase middle domain AVS55_RS04185 PF01820 D-ala D-ala ligase N-terminus AVS55_RS04185 PF07478 D-ala D-ala ligase C-terminus AVS55_RS04190 PF03799 Cell division protein FtsQ AVS55_RS04190 PF08478 POTRA domain, FtsQ-type AVS55_RS04195 PF02491 SHS2 domain inserted in FTSA AVS55_RS04195 PF14450 Cell division protein FtsA AVS55_RS04200 PF00091 Tubulin/FtsZ family, GTPase domain AVS55_RS04200 PF12327 FtsZ family, C-terminal domain AVS55_RS04205 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVS55_RS04210 PF02120 Flagellar hook-length control protein FliK AVS55_RS04215 PF01551 Peptidase family M23 AVS55_RS04220 PF01043 SecA preprotein cross-linking domain AVS55_RS04220 PF02810 SEC-C motif AVS55_RS04220 PF07516 SecA Wing and Scaffold domain AVS55_RS04220 PF07517 SecA DEAD-like domain AVS55_RS04225 PF13468 Glyoxalase-like domain AVS55_RS04230 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS04235 PF05995 Cysteine dioxygenase type I AVS55_RS04240 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS04245 PF01266 FAD dependent oxidoreductase AVS55_RS04250 PF01037 AsnC family AVS55_RS04250 PF13412 Winged helix-turn-helix DNA-binding AVS55_RS04255 PF04752 AVS55_RS04255 AVS55_RS04260 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AVS55_RS04265 PF00665 Integrase core domain AVS55_RS04265 PF13011 AVS55_RS04265 AVS55_RS04270 PF01488 Shikimate / quinate 5-dehydrogenase AVS55_RS04270 PF08501 Shikimate dehydrogenase substrate binding domain AVS55_RS04275 PF03544 Gram-negative bacterial TonB protein C-terminal AVS55_RS04280 PF00773 RNB domain AVS55_RS04285 PF05728 Uncharacterised protein family (UPF0227) AVS55_RS04290 PF01225 Mur ligase family, catalytic domain AVS55_RS04290 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS04290 PF08245 Mur ligase middle domain AVS55_RS04295 PF00578 AhpC/TSA family AVS55_RS04300 PF01220 Dehydroquinase class II AVS55_RS04305 PF00364 Biotin-requiring enzyme AVS55_RS04310 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AVS55_RS04310 PF02785 Biotin carboxylase C-terminal domain AVS55_RS04310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS04315 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AVS55_RS04320 PF11906 AVS55_RS04320 AVS55_RS04320 PF13719 AVS55_RS04320 AVS55_RS04325 PF00294 pfkB family carbohydrate kinase AVS55_RS04330 PF05433 AVS55_RS04330 AVS55_RS04335 PF00550 Phosphopantetheine attachment site AVS55_RS04340 PF04914 DltD C-terminal region AVS55_RS04350 PF03062 AVS55_RS04350 AVS55_RS04355 PF00501 AMP-binding enzyme AVS55_RS04360 PF02325 AVS55_RS04360 AVS55_RS04365 PF07382 AVS55_RS04365 AVS55_RS04370 PF00268 Ribonucleotide reductase, small chain AVS55_RS04375 PF00317 Ribonucleotide reductase, all-alpha domain AVS55_RS04375 PF02867 Ribonucleotide reductase, barrel domain AVS55_RS04375 PF03477 ATP cone domain AVS55_RS04380 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AVS55_RS04380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS04390 PF01037 AsnC family AVS55_RS04390 PF13404 AsnC-type helix-turn-helix domain AVS55_RS04400 PF07690 Major Facilitator Superfamily AVS55_RS04405 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVS55_RS04410 PF00583 Acetyltransferase (GNAT) family AVS55_RS04410 PF13549 ATP-grasp domain AVS55_RS04410 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS04415 PF00665 Integrase core domain AVS55_RS04415 PF13011 AVS55_RS04415 AVS55_RS04425 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS04425 PF07729 FCD domain AVS55_RS04435 PF00270 DEAD/DEAH box helicase AVS55_RS04435 PF00271 Helicase conserved C-terminal domain AVS55_RS04435 PF03880 DbpA RNA binding domain AVS55_RS04440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS04445 PF00857 Isochorismatase family AVS55_RS04450 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS04455 PF00005 ABC transporter AVS55_RS04465 PF02230 Phospholipase/Carboxylesterase AVS55_RS04470 PF04751 Protein of unknown function (DUF615) AVS55_RS04475 PF01523 Putative modulator of DNA gyrase AVS55_RS04480 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS04485 PF00572 Ribosomal protein L13 AVS55_RS04490 PF00380 Ribosomal protein S9/S16 AVS55_RS04495 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVS55_RS04495 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVS55_RS04505 PF01521 Iron-sulphur cluster biosynthesis AVS55_RS04510 PF03702 Uncharacterised protein family (UPF0075) AVS55_RS04515 PF01551 Peptidase family M23 AVS55_RS04520 PF00665 Integrase core domain AVS55_RS04520 PF13011 AVS55_RS04520 AVS55_RS04525 PF00579 tRNA synthetases class I (W and Y) AVS55_RS04525 PF01479 S4 domain AVS55_RS04530 PF01161 Phosphatidylethanolamine-binding protein AVS55_RS04535 PF00464 Serine hydroxymethyltransferase AVS55_RS04540 PF03477 ATP cone domain AVS55_RS04545 PF01965 DJ-1/PfpI family AVS55_RS04550 PF00857 Isochorismatase family AVS55_RS04555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS55_RS04555 PF01872 RibD C-terminal domain AVS55_RS04560 PF00665 Integrase core domain AVS55_RS04560 PF13011 AVS55_RS04560 AVS55_RS04570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS04575 PF13452 N-terminal half of MaoC dehydratase AVS55_RS04580 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS04585 PF03466 LysR substrate binding domain AVS55_RS04590 PF02515 CoA-transferase family III AVS55_RS04595 PF07690 Major Facilitator Superfamily AVS55_RS04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS04600 PF03466 LysR substrate binding domain AVS55_RS04610 PF02678 Pirin AVS55_RS04610 PF05726 Pirin C-terminal cupin domain AVS55_RS04615 PF13847 Methyltransferase domain AVS55_RS04620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS04625 PF00072 Response regulator receiver domain AVS55_RS04625 PF02954 Bacterial regulatory protein, Fis family AVS55_RS04630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVS55_RS04630 PF06481 COX Aromatic Rich Motif AVS55_RS04635 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS55_RS04640 PF00510 Cytochrome c oxidase subunit III AVS55_RS04645 PF03626 AVS55_RS04645 AVS55_RS04650 PF12840 Helix-turn-helix domain AVS55_RS04660 PF07681 AVS55_RS04660 AVS55_RS04665 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) AVS55_RS04670 PF05114 Protein of unknown function (DUF692) AVS55_RS04675 PF10048 AVS55_RS04675 AVS55_RS04680 PF11162 AVS55_RS04680 AVS55_RS04685 PF00593 TonB dependent receptor AVS55_RS04685 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS04690 PF03929 AVS55_RS04690 AVS55_RS04695 PF02417 AVS55_RS04695 AVS55_RS04700 PF01476 LysM domain AVS55_RS04700 PF01551 Peptidase family M23 AVS55_RS04710 PF05425 AVS55_RS04710 AVS55_RS04715 PF04461 Protein of unknown function (DUF520) AVS55_RS04720 PF03640 AVS55_RS04720 AVS55_RS04725 PF04542 Sigma-70 region 2 AVS55_RS04725 PF08281 Sigma-70, region 4 AVS55_RS04735 PF00665 Integrase core domain AVS55_RS04735 PF13011 AVS55_RS04735 AVS55_RS04740 PF00816 H-NS histone family AVS55_RS04745 PF00795 Carbon-nitrogen hydrolase AVS55_RS04750 PF01523 Putative modulator of DNA gyrase AVS55_RS04755 PF00793 DAHP synthetase I family AVS55_RS04760 PF05860 haemagglutination activity domain AVS55_RS04760 PF11713 Peptidase C80 family AVS55_RS04760 PF13332 AVS55_RS04760 AVS55_RS04765 PF01565 FAD binding domain AVS55_RS04765 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS04770 PF01565 FAD binding domain AVS55_RS04770 PF02913 FAD linked oxidases, C-terminal domain AVS55_RS04775 PF01565 FAD binding domain AVS55_RS04780 PF02754 AVS55_RS04780 AVS55_RS04780 PF13183 4Fe-4S dicluster domain AVS55_RS04785 PF00756 Putative esterase AVS55_RS04790 PF00593 TonB dependent receptor AVS55_RS04790 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS04795 PF12833 Helix-turn-helix domain AVS55_RS04800 PF02233 NAD(P) transhydrogenase beta subunit AVS55_RS04805 PF12769 Domain of unknown function (DUF3814) AVS55_RS04810 PF12769 Domain of unknown function (DUF3814) AVS55_RS04815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVS55_RS04815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVS55_RS04820 PF05013 N-formylglutamate amidohydrolase AVS55_RS04825 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS04830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS04830 PF03466 LysR substrate binding domain AVS55_RS04835 PF03054 tRNA methyl transferase AVS55_RS04840 PF01925 AVS55_RS04840 AVS55_RS04845 PF13410 Glutathione S-transferase, C-terminal domain AVS55_RS04845 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS04850 PF00206 Lyase AVS55_RS04850 PF08328 Adenylosuccinate lyase C-terminal AVS55_RS04855 PF01322 Cytochrome C' AVS55_RS04860 PF01292 Prokaryotic cytochrome b561 AVS55_RS04870 PF11254 AVS55_RS04870 AVS55_RS04875 PF01594 AVS55_RS04875 AVS55_RS04880 PF00665 Integrase core domain AVS55_RS04880 PF13011 AVS55_RS04880 AVS55_RS04885 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS04885 PF07729 FCD domain AVS55_RS04895 PF01425 Amidase AVS55_RS04900 PF02515 CoA-transferase family III AVS55_RS04905 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS04915 PF09084 NMT1/THI5 like AVS55_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS04925 PF00005 ABC transporter AVS55_RS04930 PF01522 Polysaccharide deacetylase AVS55_RS04935 PF00106 short chain dehydrogenase AVS55_RS04940 PF01614 Bacterial transcriptional regulator AVS55_RS04940 PF09339 IclR helix-turn-helix domain AVS55_RS04950 PF00501 AMP-binding enzyme AVS55_RS04950 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS04955 PF01042 Endoribonuclease L-PSP AVS55_RS04960 PF02653 AVS55_RS04960 AVS55_RS04965 PF02653 AVS55_RS04965 AVS55_RS04975 PF00005 ABC transporter AVS55_RS04980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS55_RS04985 PF00665 Integrase core domain AVS55_RS04985 PF13011 AVS55_RS04985 AVS55_RS04990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS55_RS04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS04995 PF03466 LysR substrate binding domain AVS55_RS05000 PF12796 Ankyrin repeats (3 copies) AVS55_RS05005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS55_RS05010 PF07690 Major Facilitator Superfamily AVS55_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05015 PF03466 LysR substrate binding domain AVS55_RS05025 PF00665 Integrase core domain AVS55_RS05025 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05025 PF13011 AVS55_RS05025 AVS55_RS05030 PF01425 Amidase AVS55_RS05035 PF00677 Lumazine binding domain AVS55_RS05040 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05045 PF01037 AsnC family AVS55_RS05045 PF13412 Winged helix-turn-helix DNA-binding AVS55_RS05050 PF05995 Cysteine dioxygenase type I AVS55_RS05055 PF00501 AMP-binding enzyme AVS55_RS05055 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS05060 PF10994 Protein of unknown function (DUF2817) AVS55_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05070 PF00005 ABC transporter AVS55_RS05080 PF03061 Thioesterase superfamily AVS55_RS05085 PF00107 Zinc-binding dehydrogenase AVS55_RS05085 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS05090 PF13468 Glyoxalase-like domain AVS55_RS05095 PF05899 Protein of unknown function (DUF861) AVS55_RS05100 PF00665 Integrase core domain AVS55_RS05100 PF13011 AVS55_RS05100 AVS55_RS05105 PF00122 E1-E2 ATPase AVS55_RS05105 PF00403 Heavy-metal-associated domain AVS55_RS05105 PF00702 haloacid dehalogenase-like hydrolase AVS55_RS05110 PF01966 HD domain AVS55_RS05115 PF00155 Aminotransferase class I and II AVS55_RS05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05120 PF03466 LysR substrate binding domain AVS55_RS05125 PF12697 Alpha/beta hydrolase family AVS55_RS05130 PF07690 Major Facilitator Superfamily AVS55_RS05135 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS05140 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS05145 PF00665 Integrase core domain AVS55_RS05145 PF13011 AVS55_RS05145 AVS55_RS05150 PF13609 Gram-negative porin AVS55_RS05155 PF02548 Ketopantoate hydroxymethyltransferase AVS55_RS05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05160 PF03466 LysR substrate binding domain AVS55_RS05165 PF00665 Integrase core domain AVS55_RS05165 PF13011 AVS55_RS05165 AVS55_RS05185 PF00665 Integrase core domain AVS55_RS05185 PF13011 AVS55_RS05185 AVS55_RS05200 PF13683 AVS55_RS05200 AVS55_RS05220 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS05225 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS05230 PF00665 Integrase core domain AVS55_RS05230 PF13011 AVS55_RS05230 AVS55_RS05235 PF05170 AVS55_RS05235 AVS55_RS05240 PF03352 Methyladenine glycosylase AVS55_RS05245 PF00376 MerR family regulatory protein AVS55_RS05245 PF09278 MerR, DNA binding AVS55_RS05260 PF13416 Bacterial extracellular solute-binding protein AVS55_RS05265 PF00665 Integrase core domain AVS55_RS05265 PF12831 FAD dependent oxidoreductase AVS55_RS05265 PF13011 AVS55_RS05265 AVS55_RS05270 PF12831 FAD dependent oxidoreductase AVS55_RS05275 PF00005 ABC transporter AVS55_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05285 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05300 PF00665 Integrase core domain AVS55_RS05300 PF13011 AVS55_RS05300 AVS55_RS05305 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05310 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS05310 PF07729 FCD domain AVS55_RS05315 PF04412 AVS55_RS05315 AVS55_RS05320 PF01989 Protein of unknown function DUF126 AVS55_RS05325 PF03992 Antibiotic biosynthesis monooxygenase AVS55_RS05335 PF00665 Integrase core domain AVS55_RS05335 PF13011 AVS55_RS05335 AVS55_RS05340 PF00465 Iron-containing alcohol dehydrogenase AVS55_RS05345 PF00665 Integrase core domain AVS55_RS05345 PF13011 AVS55_RS05345 AVS55_RS05355 PF03180 NLPA lipoprotein AVS55_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05365 PF00005 ABC transporter AVS55_RS05365 PF09383 NIL domain AVS55_RS05370 PF01055 Glycosyl hydrolases family 31 AVS55_RS05380 PF00459 Inositol monophosphatase family AVS55_RS05390 PF00665 Integrase core domain AVS55_RS05390 PF13011 AVS55_RS05390 AVS55_RS05395 PF00501 AMP-binding enzyme AVS55_RS05395 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS05400 PF01546 Peptidase family M20/M25/M40 AVS55_RS05400 PF07687 Peptidase dimerisation domain AVS55_RS05405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05405 PF03466 LysR substrate binding domain AVS55_RS05410 PF03601 AVS55_RS05410 AVS55_RS05415 PF03061 Thioesterase superfamily AVS55_RS05420 PF00571 CBS domain AVS55_RS05420 PF01769 Divalent cation transporter AVS55_RS05420 PF03448 MgtE intracellular N domain AVS55_RS05425 PF00665 Integrase core domain AVS55_RS05425 PF13011 AVS55_RS05425 AVS55_RS05430 PF00355 Rieske [2Fe-2S] domain AVS55_RS05430 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS55_RS05435 PF01757 AVS55_RS05435 AVS55_RS05440 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05445 PF01614 Bacterial transcriptional regulator AVS55_RS05445 PF09339 IclR helix-turn-helix domain AVS55_RS05450 PF02609 Exonuclease VII small subunit AVS55_RS05455 PF00348 Polyprenyl synthetase AVS55_RS05460 PF02779 Transketolase, pyrimidine binding domain AVS55_RS05460 PF02780 Transketolase, C-terminal domain AVS55_RS05460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVS55_RS05465 PF02649 Type I GTP cyclohydrolase folE2 AVS55_RS05470 PF01250 Ribosomal protein S6 AVS55_RS05480 PF01084 Ribosomal protein S18 AVS55_RS05485 PF01281 Ribosomal protein L9, N-terminal domain AVS55_RS05485 PF03948 Ribosomal protein L9, C-terminal domain AVS55_RS05495 PF00772 DnaB-like helicase N terminal domain AVS55_RS05495 PF03796 DnaB-like helicase C terminal domain AVS55_RS05500 PF13593 SBF-like CPA transporter family (DUF4137) AVS55_RS05505 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVS55_RS05510 PF02562 PhoH-like protein AVS55_RS05510 PF13638 PIN domain AVS55_RS05515 PF00578 AhpC/TSA family AVS55_RS05520 PF04430 Protein of unknown function (DUF498/DUF598) AVS55_RS05525 PF00155 Aminotransferase class I and II AVS55_RS05530 PF00742 Homoserine dehydrogenase AVS55_RS05530 PF01842 ACT domain AVS55_RS05530 PF03447 Homoserine dehydrogenase, NAD binding domain AVS55_RS05535 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS05535 PF14821 Threonine synthase N terminus AVS55_RS05540 PF06004 Bacterial protein of unknown function (DUF903) AVS55_RS05545 PF00665 Integrase core domain AVS55_RS05545 PF13011 AVS55_RS05545 AVS55_RS05550 PF02615 Malate/L-lactate dehydrogenase AVS55_RS05560 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS05565 PF00665 Integrase core domain AVS55_RS05565 PF13011 AVS55_RS05565 AVS55_RS05575 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS55_RS05580 PF01649 Ribosomal protein S20 AVS55_RS05585 PF04773 FecR protein AVS55_RS05585 PF16220 AVS55_RS05585 AVS55_RS05590 PF03023 AVS55_RS05590 AVS55_RS05595 PF00106 short chain dehydrogenase AVS55_RS05600 PF00406 Adenylate kinase AVS55_RS05600 PF05191 Adenylate kinase, active site lid AVS55_RS05605 PF02348 Cytidylyltransferase AVS55_RS05610 PF03966 Trm112p-like protein AVS55_RS05615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVS55_RS05620 PF02472 Biopolymer transport protein ExbD/TolR AVS55_RS05625 PF01618 AVS55_RS05625 AVS55_RS05630 PF00665 Integrase core domain AVS55_RS05630 PF13011 AVS55_RS05630 AVS55_RS05635 PF02601 AVS55_RS05635 AVS55_RS05635 PF13742 AVS55_RS05635 AVS55_RS05640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVS55_RS05640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVS55_RS05645 PF00654 Voltage gated chloride channel AVS55_RS05650 PF00108 Thiolase, N-terminal domain AVS55_RS05650 PF02803 Thiolase, C-terminal domain AVS55_RS05655 PF02643 Uncharacterized ACR, COG1430 AVS55_RS05660 PF00313 'Cold-shock' DNA-binding domain AVS55_RS05665 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVS55_RS05670 PF00207 Alpha-2-macroglobulin family AVS55_RS05670 PF01835 MG2 domain AVS55_RS05670 PF07678 A-macroglobulin complement component AVS55_RS05670 PF07703 Alpha-2-macroglobulin family N-terminal region AVS55_RS05670 PF10569 Alpha-macro-globulin thiol-ester bond-forming region AVS55_RS05670 PF11974 Alpha-2-macroglobulin MG1 domain AVS55_RS05675 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS05675 PF00912 Transglycosylase AVS55_RS05675 PF06832 AVS55_RS05675 AVS55_RS05680 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS05680 PF02861 Clp amino terminal domain AVS55_RS05680 PF07724 AAA domain (Cdc48 subfamily) AVS55_RS05680 PF10431 C-terminal, D2-small domain, of ClpB protein AVS55_RS05685 PF04403 AVS55_RS05685 AVS55_RS05690 PF02470 AVS55_RS05690 AVS55_RS05695 PF03886 Protein of unknown function (DUF330) AVS55_RS05700 PF00171 Aldehyde dehydrogenase family AVS55_RS05700 PF01619 Proline dehydrogenase AVS55_RS05700 PF14850 DNA-binding domain of Proline dehydrogenase AVS55_RS05705 PF00665 Integrase core domain AVS55_RS05705 PF13011 AVS55_RS05705 AVS55_RS05710 PF13458 Periplasmic binding protein AVS55_RS05715 PF02653 AVS55_RS05715 AVS55_RS05720 PF02653 AVS55_RS05720 AVS55_RS05725 PF00005 ABC transporter AVS55_RS05725 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS05730 PF00005 ABC transporter AVS55_RS05735 PF07690 Major Facilitator Superfamily AVS55_RS05740 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS05750 PF03212 Pertactin AVS55_RS05750 PF03797 Autotransporter beta-domain AVS55_RS05760 PF00543 Nitrogen regulatory protein P-II AVS55_RS05765 PF04380 AVS55_RS05765 AVS55_RS05775 PF00665 Integrase core domain AVS55_RS05775 PF13011 AVS55_RS05775 AVS55_RS05780 PF00083 Sugar (and other) transporter AVS55_RS05790 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS55_RS05795 PF00510 Cytochrome c oxidase subunit III AVS55_RS05800 PF03626 AVS55_RS05800 AVS55_RS05805 PF02104 AVS55_RS05805 AVS55_RS05810 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS05815 PF05013 N-formylglutamate amidohydrolase AVS55_RS05820 PF00665 Integrase core domain AVS55_RS05820 PF13011 AVS55_RS05820 AVS55_RS05825 PF00665 Integrase core domain AVS55_RS05825 PF13011 AVS55_RS05825 AVS55_RS05830 PF13411 MerR HTH family regulatory protein AVS55_RS05835 PF00122 E1-E2 ATPase AVS55_RS05835 PF00702 haloacid dehalogenase-like hydrolase AVS55_RS05840 PF01548 AVS55_RS05840 AVS55_RS05840 PF02371 AVS55_RS05840 AVS55_RS05845 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS05845 PF16925 AVS55_RS05845 AVS55_RS05850 PF13663 AVS55_RS05850 AVS55_RS05855 PF04055 Radical SAM superfamily AVS55_RS05855 PF06968 Biotin and Thiamin Synthesis associated domain AVS55_RS05865 PF07690 Major Facilitator Superfamily AVS55_RS05870 PF08534 Redoxin AVS55_RS05880 PF01738 Dienelactone hydrolase family AVS55_RS05885 PF05359 AVS55_RS05885 AVS55_RS05890 PF01967 MoaC family AVS55_RS05895 PF02597 ThiS family AVS55_RS05900 PF02391 MoaE protein AVS55_RS05905 PF00994 Probable molybdopterin binding domain AVS55_RS05910 PF00994 Probable molybdopterin binding domain AVS55_RS05910 PF03453 MoeA N-terminal region (domain I and II) AVS55_RS05910 PF03454 MoeA C-terminal region (domain IV) AVS55_RS05915 PF04055 Radical SAM superfamily AVS55_RS05915 PF06463 Molybdenum Cofactor Synthesis C AVS55_RS05915 PF13394 4Fe-4S single cluster domain AVS55_RS05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05920 PF12727 PBP superfamily domain AVS55_RS05925 PF00665 Integrase core domain AVS55_RS05925 PF13011 AVS55_RS05925 AVS55_RS05930 PF00881 Nitroreductase family AVS55_RS05935 PF00206 Lyase AVS55_RS05935 PF14698 Argininosuccinate lyase C-terminal AVS55_RS05940 PF00924 Mechanosensitive ion channel AVS55_RS05945 PF00795 Carbon-nitrogen hydrolase AVS55_RS05945 PF02540 NAD synthase AVS55_RS05950 PF00543 Nitrogen regulatory protein P-II AVS55_RS05955 PF03013 Pyrimidine dimer DNA glycosylase AVS55_RS05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS05975 PF03466 LysR substrate binding domain AVS55_RS05980 PF01019 Gamma-glutamyltranspeptidase AVS55_RS05985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS05990 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05995 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS05995 PF12911 AVS55_RS05995 AVS55_RS06000 PF03193 Protein of unknown function, DUF258 AVS55_RS06005 PF01435 Peptidase family M48 AVS55_RS06005 PF16491 AVS55_RS06005 AVS55_RS06010 PF00929 Exonuclease AVS55_RS06015 PF03853 YjeF-related protein N-terminus AVS55_RS06020 PF07848 PaaX-like protein AVS55_RS06020 PF08223 PaaX-like protein C-terminal domain AVS55_RS06025 PF05138 Phenylacetic acid catabolic protein AVS55_RS06030 PF06243 Phenylacetic acid degradation B AVS55_RS06035 PF05138 Phenylacetic acid catabolic protein AVS55_RS06040 PF01883 Domain of unknown function DUF59 AVS55_RS06045 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS06045 PF00175 Oxidoreductase NAD-binding domain AVS55_RS06045 PF00970 Oxidoreductase FAD-binding domain AVS55_RS06050 PF00665 Integrase core domain AVS55_RS06050 PF13011 AVS55_RS06050 AVS55_RS06055 PF00171 Aldehyde dehydrogenase family AVS55_RS06060 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS06065 PF03061 Thioesterase superfamily AVS55_RS06070 PF00501 AMP-binding enzyme AVS55_RS06070 PF14535 AMP-binding enzyme C-terminal domain AVS55_RS06075 PF16970 AVS55_RS06075 AVS55_RS06080 PF00665 Integrase core domain AVS55_RS06080 PF13011 AVS55_RS06080 AVS55_RS06085 PF00665 Integrase core domain AVS55_RS06085 PF13011 AVS55_RS06085 AVS55_RS06095 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS06100 PF06808 AVS55_RS06100 AVS55_RS06105 PF04290 AVS55_RS06105 AVS55_RS06110 PF02769 AIR synthase related protein, C-terminal domain AVS55_RS06110 PF13507 CobB/CobQ-like glutamine amidotransferase domain AVS55_RS06115 PF05860 haemagglutination activity domain AVS55_RS06115 PF13332 AVS55_RS06115 AVS55_RS06120 PF00665 Integrase core domain AVS55_RS06120 PF13011 AVS55_RS06120 AVS55_RS06125 PF04632 AVS55_RS06125 AVS55_RS06130 PF12802 MarR family AVS55_RS06135 PF01381 Helix-turn-helix AVS55_RS06135 PF07883 Cupin domain AVS55_RS06140 PF00596 Class II Aldolase and Adducin N-terminal domain AVS55_RS06145 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS06150 PF01242 6-pyruvoyl tetrahydropterin synthase AVS55_RS06160 PF00472 RF-1 domain AVS55_RS06165 PF09997 AVS55_RS06165 AVS55_RS06170 PF01124 MAPEG family AVS55_RS06175 PF01614 Bacterial transcriptional regulator AVS55_RS06175 PF09339 IclR helix-turn-helix domain AVS55_RS06180 PF00701 Dihydrodipicolinate synthetase family AVS55_RS06185 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06195 PF05742 AVS55_RS06195 AVS55_RS06200 PF01965 DJ-1/PfpI family AVS55_RS06205 PF04909 Amidohydrolase AVS55_RS06210 PF00890 FAD binding domain AVS55_RS06215 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06220 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS06225 PF01614 Bacterial transcriptional regulator AVS55_RS06225 PF09339 IclR helix-turn-helix domain AVS55_RS06230 PF01266 FAD dependent oxidoreductase AVS55_RS06230 PF16901 AVS55_RS06230 AVS55_RS06235 PF00455 AVS55_RS06235 AVS55_RS06235 PF08220 DeoR-like helix-turn-helix domain AVS55_RS06240 PF00005 ABC transporter AVS55_RS06240 PF08402 TOBE domain AVS55_RS06245 PF00005 ABC transporter AVS55_RS06255 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06260 PF09928 AVS55_RS06260 AVS55_RS06265 PF13416 Bacterial extracellular solute-binding protein AVS55_RS06275 PF04367 AVS55_RS06275 AVS55_RS06280 PF01037 AsnC family AVS55_RS06280 PF13412 Winged helix-turn-helix DNA-binding AVS55_RS06285 PF01266 FAD dependent oxidoreductase AVS55_RS06290 PF00149 Calcineurin-like phosphoesterase AVS55_RS06295 PF13476 AAA domain AVS55_RS06300 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06305 PF00665 Integrase core domain AVS55_RS06305 PF13011 AVS55_RS06305 AVS55_RS06320 PF03797 Autotransporter beta-domain AVS55_RS06325 PF09998 AVS55_RS06325 AVS55_RS06330 PF00478 IMP dehydrogenase / GMP reductase domain AVS55_RS06330 PF00571 CBS domain AVS55_RS06335 PF00117 Glutamine amidotransferase class-I AVS55_RS06335 PF00958 GMP synthase C terminal domain AVS55_RS06335 PF02540 NAD synthase AVS55_RS06345 PF01381 Helix-turn-helix AVS55_RS06350 PF07804 HipA-like C-terminal domain AVS55_RS06350 PF07805 HipA-like N-terminal domain AVS55_RS06350 PF13657 HipA N-terminal domain AVS55_RS06355 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS06360 PF07690 Major Facilitator Superfamily AVS55_RS06370 PF01614 Bacterial transcriptional regulator AVS55_RS06370 PF09339 IclR helix-turn-helix domain AVS55_RS06375 PF07969 Amidohydrolase family AVS55_RS06380 PF09084 NMT1/THI5 like AVS55_RS06385 PF00005 ABC transporter AVS55_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06395 PF04412 AVS55_RS06395 AVS55_RS06400 PF01989 Protein of unknown function DUF126 AVS55_RS06410 PF00665 Integrase core domain AVS55_RS06410 PF13011 AVS55_RS06410 AVS55_RS06415 PF01965 DJ-1/PfpI family AVS55_RS06425 PF00916 AVS55_RS06425 AVS55_RS06425 PF01740 STAS domain AVS55_RS06430 PF00753 Metallo-beta-lactamase superfamily AVS55_RS06430 PF07521 RNA-metabolising metallo-beta-lactamase AVS55_RS06430 PF10996 Beta-Casp domain AVS55_RS06440 PF00665 Integrase core domain AVS55_RS06440 PF13011 AVS55_RS06440 AVS55_RS06445 PF13515 AVS55_RS06445 AVS55_RS06450 PF12706 Beta-lactamase superfamily domain AVS55_RS06455 PF01965 DJ-1/PfpI family AVS55_RS06455 PF12833 Helix-turn-helix domain AVS55_RS06460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS06460 PF03466 LysR substrate binding domain AVS55_RS06465 PF12973 ChrR Cupin-like domain AVS55_RS06470 PF01593 Flavin containing amine oxidoreductase AVS55_RS06470 PF13450 NAD(P)-binding Rossmann-like domain AVS55_RS06475 PF00107 Zinc-binding dehydrogenase AVS55_RS06475 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS06480 PF07690 Major Facilitator Superfamily AVS55_RS06485 PF00155 Aminotransferase class I and II AVS55_RS06485 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS06490 PF04299 Putative FMN-binding domain AVS55_RS06495 PF01810 AVS55_RS06495 AVS55_RS06500 PF08818 Domain of unknown function (DU1801) AVS55_RS06505 PF01546 Peptidase family M20/M25/M40 AVS55_RS06505 PF07687 Peptidase dimerisation domain AVS55_RS06510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06520 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06525 PF00005 ABC transporter AVS55_RS06525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS06530 PF00356 Bacterial regulatory proteins, lacI family AVS55_RS06530 PF13377 Periplasmic binding protein-like domain AVS55_RS06545 PF09278 MerR, DNA binding AVS55_RS06550 PF00665 Integrase core domain AVS55_RS06550 PF13011 AVS55_RS06550 AVS55_RS06555 PF04307 AVS55_RS06555 AVS55_RS06560 PF09335 AVS55_RS06560 AVS55_RS06570 PF00583 Acetyltransferase (GNAT) family AVS55_RS06575 PF13649 Methyltransferase domain AVS55_RS06580 PF00665 Integrase core domain AVS55_RS06580 PF13011 AVS55_RS06580 AVS55_RS06590 PF00155 Aminotransferase class I and II AVS55_RS06590 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS06595 PF00665 Integrase core domain AVS55_RS06595 PF13011 AVS55_RS06595 AVS55_RS06600 PF00692 dUTPase AVS55_RS06610 PF00665 Integrase core domain AVS55_RS06610 PF13011 AVS55_RS06610 AVS55_RS06615 PF01632 Ribosomal protein L35 AVS55_RS06620 PF00453 Ribosomal protein L20 AVS55_RS06625 PF01409 tRNA synthetases class II core domain (F) AVS55_RS06625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVS55_RS06630 PF01588 Putative tRNA binding domain AVS55_RS06630 PF03147 Ferredoxin-fold anticodon binding domain AVS55_RS06630 PF03483 B3/4 domain AVS55_RS06630 PF03484 tRNA synthetase B5 domain AVS55_RS06635 PF00216 Bacterial DNA-binding protein AVS55_RS06640 PF13411 MerR HTH family regulatory protein AVS55_RS06655 PF04366 AVS55_RS06655 AVS55_RS06665 PF00665 Integrase core domain AVS55_RS06665 PF13011 AVS55_RS06665 AVS55_RS06685 PF04231 Endonuclease I AVS55_RS06690 PF08085 AVS55_RS06690 AVS55_RS06705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS55_RS06705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS55_RS06710 PF04381 Putative exonuclease, RdgC AVS55_RS06720 PF02515 CoA-transferase family III AVS55_RS06725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS06725 PF03466 LysR substrate binding domain AVS55_RS06735 PF01796 AVS55_RS06735 AVS55_RS06735 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) AVS55_RS06740 PF01575 MaoC like domain AVS55_RS06745 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS06750 PF13343 Bacterial extracellular solute-binding protein AVS55_RS06755 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS06760 PF00005 ABC transporter AVS55_RS06760 PF08402 TOBE domain AVS55_RS06765 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS06770 PF00083 Sugar (and other) transporter AVS55_RS06775 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS06775 PF00672 HAMP domain AVS55_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS06775 PF08521 AVS55_RS06775 AVS55_RS06780 PF00072 Response regulator receiver domain AVS55_RS06780 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS06785 PF00154 recA bacterial DNA recombination protein AVS55_RS06790 PF02631 RecX family AVS55_RS06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS06795 PF03466 LysR substrate binding domain AVS55_RS06800 PF01717 Cobalamin-independent synthase, Catalytic domain AVS55_RS06800 PF08267 Cobalamin-independent synthase, N-terminal domain AVS55_RS06805 PF11136 AVS55_RS06805 AVS55_RS06810 PF00549 CoA-ligase AVS55_RS06810 PF08442 ATP-grasp domain AVS55_RS06815 PF00549 CoA-ligase AVS55_RS06815 PF02629 CoA binding domain AVS55_RS06820 PF03741 AVS55_RS06820 AVS55_RS06825 PF03741 AVS55_RS06825 AVS55_RS06830 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVS55_RS06830 PF03900 Porphobilinogen deaminase, C-terminal domain AVS55_RS06835 PF02602 Uroporphyrinogen-III synthase HemD AVS55_RS06840 PF04375 AVS55_RS06840 AVS55_RS06845 PF07219 AVS55_RS06845 AVS55_RS06850 PF00719 Inorganic pyrophosphatase AVS55_RS06855 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS55_RS06860 PF08085 AVS55_RS06860 AVS55_RS06885 PF08666 SAF domain AVS55_RS06885 PF16976 AVS55_RS06885 AVS55_RS06890 PF00263 AVS55_RS06890 AVS55_RS06890 PF13629 AVS55_RS06890 AVS55_RS06895 PF00437 Type II/IV secretion system protein AVS55_RS06895 PF00498 FHA domain AVS55_RS06900 PF00482 Type II secretion system (T2SS), protein F AVS55_RS06910 PF00665 Integrase core domain AVS55_RS06910 PF13011 AVS55_RS06910 AVS55_RS06915 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVS55_RS06920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVS55_RS06925 PF02615 Malate/L-lactate dehydrogenase AVS55_RS06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS06930 PF03466 LysR substrate binding domain AVS55_RS06935 PF01244 Membrane dipeptidase (Peptidase family M19) AVS55_RS06940 PF01266 FAD dependent oxidoreductase AVS55_RS06945 PF04267 Sarcosine oxidase, delta subunit family AVS55_RS06950 PF01571 Aminomethyltransferase folate-binding domain AVS55_RS06950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS06950 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVS55_RS06950 PF13510 2Fe-2S iron-sulfur cluster binding domain AVS55_RS06955 PF04268 Sarcosine oxidase, gamma subunit family AVS55_RS06960 PF00551 Formyl transferase AVS55_RS06965 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS06970 PF03972 MmgE/PrpD family AVS55_RS06975 PF00561 alpha/beta hydrolase fold AVS55_RS06985 PF01565 FAD binding domain AVS55_RS06985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVS55_RS06990 PF01113 Dihydrodipicolinate reductase, N-terminus AVS55_RS06990 PF05173 Dihydrodipicolinate reductase, C-terminus AVS55_RS06995 PF04355 SmpA / OmlA family AVS55_RS07000 PF01475 Ferric uptake regulator family AVS55_RS07005 PF02463 RecF/RecN/SMC N terminal domain AVS55_RS07010 PF01513 ATP-NAD kinase AVS55_RS07015 PF01628 HrcA protein C terminal domain AVS55_RS07015 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AVS55_RS07020 PF00762 Ferrochelatase AVS55_RS07030 PF01025 GrpE AVS55_RS07040 PF00012 Hsp70 protein AVS55_RS07045 PF00226 DnaJ domain AVS55_RS07045 PF00684 DnaJ central domain AVS55_RS07045 PF01556 DnaJ C terminal domain AVS55_RS07050 PF00675 Insulinase (Peptidase family M16) AVS55_RS07050 PF05193 Peptidase M16 inactive domain AVS55_RS07060 PF13420 Acetyltransferase (GNAT) domain AVS55_RS07065 PF05762 VWA domain containing CoxE-like protein AVS55_RS07070 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS07075 PF00665 Integrase core domain AVS55_RS07075 PF13011 AVS55_RS07075 AVS55_RS07080 PF00034 Cytochrome c AVS55_RS07085 PF00034 Cytochrome c AVS55_RS07090 PF08897 AVS55_RS07090 AVS55_RS07095 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS55_RS07100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS55_RS07105 PF04932 AVS55_RS07105 AVS55_RS07110 PF00665 Integrase core domain AVS55_RS07110 PF13011 AVS55_RS07110 AVS55_RS07115 PF00072 Response regulator receiver domain AVS55_RS07115 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS07125 PF02669 AVS55_RS07125 AVS55_RS07130 PF00122 E1-E2 ATPase AVS55_RS07130 PF00702 haloacid dehalogenase-like hydrolase AVS55_RS07135 PF03814 AVS55_RS07135 AVS55_RS07140 PF09604 AVS55_RS07140 AVS55_RS07145 PF13937 AVS55_RS07145 AVS55_RS07150 PF00474 Sodium:solute symporter family AVS55_RS07155 PF00665 Integrase core domain AVS55_RS07155 PF13011 AVS55_RS07155 AVS55_RS07160 PF00665 Integrase core domain AVS55_RS07160 PF13011 AVS55_RS07160 AVS55_RS07165 PF00893 Small Multidrug Resistance protein AVS55_RS07170 PF01713 Smr domain AVS55_RS07175 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS07180 PF01580 FtsK/SpoIIIE family AVS55_RS07180 PF09397 Ftsk gamma domain AVS55_RS07180 PF13491 AVS55_RS07180 AVS55_RS07185 PF03548 Outer membrane lipoprotein carrier protein LolA AVS55_RS07190 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS07190 PF12002 MgsA AAA+ ATPase C terminal AVS55_RS07190 PF16193 AVS55_RS07190 AVS55_RS07195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS55_RS07195 PF02403 Seryl-tRNA synthetase N-terminal domain AVS55_RS07220 PF00990 GGDEF domain AVS55_RS07230 PF01914 AVS55_RS07230 AVS55_RS07235 PF00593 TonB dependent receptor AVS55_RS07235 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS07240 PF07690 Major Facilitator Superfamily AVS55_RS07245 PF12833 Helix-turn-helix domain AVS55_RS07250 PF00355 Rieske [2Fe-2S] domain AVS55_RS07250 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS55_RS07255 PF11575 AVS55_RS07255 AVS55_RS07260 PF04183 IucA / IucC family AVS55_RS07260 PF06276 Ferric iron reductase FhuF-like transporter AVS55_RS07265 PF13523 Acetyltransferase (GNAT) domain AVS55_RS07270 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AVS55_RS07280 PF00999 Sodium/hydrogen exchanger family AVS55_RS07285 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS07290 PF00665 Integrase core domain AVS55_RS07290 PF13011 AVS55_RS07290 AVS55_RS07295 PF03883 AVS55_RS07295 AVS55_RS07300 PF07690 Major Facilitator Superfamily AVS55_RS07305 PF12805 AVS55_RS07305 AVS55_RS07305 PF13515 AVS55_RS07305 AVS55_RS07310 PF01471 Putative peptidoglycan binding domain AVS55_RS07310 PF01510 N-acetylmuramoyl-L-alanine amidase AVS55_RS07315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS55_RS07320 PF02545 Maf-like protein AVS55_RS07325 PF02620 AVS55_RS07325 AVS55_RS07330 PF01783 Ribosomal L32p protein family AVS55_RS07335 PF02504 Fatty acid synthesis protein AVS55_RS07340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVS55_RS07340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVS55_RS07345 PF00698 Acyl transferase domain AVS55_RS07350 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS07355 PF00550 Phosphopantetheine attachment site AVS55_RS07360 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS55_RS07360 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS55_RS07370 PF04542 Sigma-70 region 2 AVS55_RS07370 PF08281 Sigma-70, region 4 AVS55_RS07375 PF03872 Anti sigma-E protein RseA, N-terminal domain AVS55_RS07380 PF03888 MucB/RseB family AVS55_RS07380 PF17188 AVS55_RS07380 AVS55_RS07385 PF13180 PDZ domain AVS55_RS07385 PF13365 Trypsin-like peptidase domain AVS55_RS07390 PF00009 Elongation factor Tu GTP binding domain AVS55_RS07390 PF00679 Elongation factor G C-terminus AVS55_RS07390 PF03144 Elongation factor Tu domain 2 AVS55_RS07390 PF06421 GTP-binding protein LepA C-terminus AVS55_RS07395 PF00717 Peptidase S24-like AVS55_RS07395 PF10502 Signal peptidase, peptidase S26 AVS55_RS07400 PF00035 Double-stranded RNA binding motif AVS55_RS07400 PF14622 Ribonuclease-III-like AVS55_RS07405 PF01926 50S ribosome-binding GTPase AVS55_RS07405 PF07650 KH domain AVS55_RS07410 PF02565 Recombination protein O C terminal AVS55_RS07410 PF11967 Recombination protein O N terminal AVS55_RS07415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS07415 PF03466 LysR substrate binding domain AVS55_RS07420 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS07420 PF00665 Integrase core domain AVS55_RS07420 PF13011 AVS55_RS07420 AVS55_RS07425 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS55_RS07430 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS07435 PF01027 Inhibitor of apoptosis-promoting Bax1 AVS55_RS07445 PF04364 DNA polymerase III chi subunit, HolC AVS55_RS07450 PF00883 Cytosol aminopeptidase family, catalytic domain AVS55_RS07450 PF02789 Cytosol aminopeptidase family, N-terminal domain AVS55_RS07455 PF03739 AVS55_RS07455 AVS55_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS07460 PF03466 LysR substrate binding domain AVS55_RS07465 PF13458 Periplasmic binding protein AVS55_RS07470 PF00171 Aldehyde dehydrogenase family AVS55_RS07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS07475 PF03466 LysR substrate binding domain AVS55_RS07480 PF00665 Integrase core domain AVS55_RS07480 PF13011 AVS55_RS07480 AVS55_RS07485 PF10087 AVS55_RS07485 AVS55_RS07490 PF00877 NlpC/P60 family AVS55_RS07495 PF00501 AMP-binding enzyme AVS55_RS07495 PF16177 AVS55_RS07495 AVS55_RS07500 PF00501 AMP-binding enzyme AVS55_RS07500 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS07505 PF03928 Domain of unknown function (DUF336) AVS55_RS07510 PF11700 AVS55_RS07510 AVS55_RS07515 PF00501 AMP-binding enzyme AVS55_RS07515 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS07515 PF16177 AVS55_RS07515 AVS55_RS07520 PF00892 EamA-like transporter family AVS55_RS07525 PF01212 Beta-eliminating lyase AVS55_RS07530 PF03992 Antibiotic biosynthesis monooxygenase AVS55_RS07540 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS07545 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AVS55_RS07545 PF13450 NAD(P)-binding Rossmann-like domain AVS55_RS07550 PF13279 Thioesterase-like superfamily AVS55_RS07560 PF01144 Coenzyme A transferase AVS55_RS07565 PF01380 SIS domain AVS55_RS07565 PF01418 Helix-turn-helix domain, rpiR family AVS55_RS07570 PF01112 Asparaginase AVS55_RS07575 PF00005 ABC transporter AVS55_RS07575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS07580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS07585 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS07590 PF12911 AVS55_RS07590 AVS55_RS07595 PF03576 Peptidase family S58 AVS55_RS07600 PF04951 D-aminopeptidase AVS55_RS07605 PF00557 Metallopeptidase family M24 AVS55_RS07605 PF01321 Creatinase/Prolidase N-terminal domain AVS55_RS07605 PF16188 AVS55_RS07605 AVS55_RS07605 PF16189 AVS55_RS07605 AVS55_RS07610 PF00665 Integrase core domain AVS55_RS07610 PF13011 AVS55_RS07610 AVS55_RS07615 PF00117 Glutamine amidotransferase class-I AVS55_RS07615 PF06418 CTP synthase N-terminus AVS55_RS07620 PF00793 DAHP synthetase I family AVS55_RS07625 PF07045 Protein of unknown function (DUF1330) AVS55_RS07630 PF00113 Enolase, C-terminal TIM barrel domain AVS55_RS07630 PF03952 Enolase, N-terminal domain AVS55_RS07635 PF04977 Septum formation initiator AVS55_RS07640 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS07645 PF13460 NADH(P)-binding AVS55_RS07650 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS07655 PF07883 Cupin domain AVS55_RS07665 PF01430 Hsp33 protein AVS55_RS07670 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS07675 PF00501 AMP-binding enzyme AVS55_RS07675 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS07680 PF00149 Calcineurin-like phosphoesterase AVS55_RS07685 PF06271 AVS55_RS07685 AVS55_RS07695 PF01170 Putative RNA methylase family UPF0020 AVS55_RS07695 PF02926 THUMP domain AVS55_RS07700 PF03653 AVS55_RS07700 AVS55_RS07705 PF03972 MmgE/PrpD family AVS55_RS07710 PF04303 PrpF protein AVS55_RS07715 PF00330 Aconitase family (aconitate hydratase) AVS55_RS07715 PF00694 Aconitase C-terminal domain AVS55_RS07720 PF00285 Citrate synthase AVS55_RS07730 PF00056 lactate/malate dehydrogenase, NAD binding domain AVS55_RS07730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVS55_RS07735 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS07735 PF07702 UTRA domain AVS55_RS07740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVS55_RS07745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVS55_RS07750 PF00890 FAD binding domain AVS55_RS07750 PF02910 Fumarate reductase flavoprotein C-term AVS55_RS07755 PF13085 2Fe-2S iron-sulfur cluster binding domain AVS55_RS07755 PF13534 4Fe-4S dicluster domain AVS55_RS07760 PF03937 Flavinator of succinate dehydrogenase AVS55_RS07765 PF00285 Citrate synthase AVS55_RS07780 PF00665 Integrase core domain AVS55_RS07780 PF13011 AVS55_RS07780 AVS55_RS07785 PF06808 AVS55_RS07785 AVS55_RS07790 PF04290 AVS55_RS07790 AVS55_RS07795 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS07800 PF02687 AVS55_RS07800 AVS55_RS07805 PF01152 Bacterial-like globin AVS55_RS07810 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family AVS55_RS07815 PF13416 Bacterial extracellular solute-binding protein AVS55_RS07820 PF00005 ABC transporter AVS55_RS07820 PF08402 TOBE domain AVS55_RS07825 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS07830 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS07835 PF03960 ArsC family AVS55_RS07840 PF02245 Methylpurine-DNA glycosylase (MPG) AVS55_RS07845 PF10707 AVS55_RS07845 AVS55_RS07850 PF02646 AVS55_RS07850 AVS55_RS07855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS07855 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS07860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVS55_RS07865 PF01895 PhoU domain AVS55_RS07870 PF04185 Phosphoesterase family AVS55_RS07870 PF05506 AVS55_RS07870 AVS55_RS07875 PF04362 Bacterial Fe(2+) trafficking AVS55_RS07880 PF00583 Acetyltransferase (GNAT) family AVS55_RS07880 PF00696 Amino acid kinase family AVS55_RS07885 PF00271 Helicase conserved C-terminal domain AVS55_RS07885 PF04408 Helicase associated domain (HA2) AVS55_RS07885 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AVS55_RS07885 PF11898 AVS55_RS07885 AVS55_RS07890 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AVS55_RS07895 PF01336 OB-fold nucleic acid binding domain AVS55_RS07895 PF02811 PHP domain AVS55_RS07895 PF07733 Bacterial DNA polymerase III alpha subunit AVS55_RS07895 PF14579 Helix-hairpin-helix motif AVS55_RS07900 PF00534 Glycosyl transferases group 1 AVS55_RS07900 PF13439 Glycosyltransferase Family 4 AVS55_RS07905 PF01522 Polysaccharide deacetylase AVS55_RS07910 PF00535 Glycosyl transferase family 2 AVS55_RS07915 PF00534 Glycosyl transferases group 1 AVS55_RS07915 PF13439 Glycosyltransferase Family 4 AVS55_RS07920 PF00884 Sulfatase AVS55_RS07925 PF01522 Polysaccharide deacetylase AVS55_RS07930 PF13439 Glycosyltransferase Family 4 AVS55_RS07930 PF13692 Glycosyl transferases group 1 AVS55_RS07935 PF03692 AVS55_RS07935 AVS55_RS07940 PF02698 DUF218 domain AVS55_RS07945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS55_RS07950 PF00005 ABC transporter AVS55_RS07950 PF00664 ABC transporter transmembrane region AVS55_RS07955 PF07690 Major Facilitator Superfamily AVS55_RS07960 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS07965 PF00800 Prephenate dehydratase AVS55_RS07970 PF10150 Ribonuclease E/G family AVS55_RS07975 PF00665 Integrase core domain AVS55_RS07975 PF13011 AVS55_RS07975 AVS55_RS08010 PF03212 Pertactin AVS55_RS08010 PF03797 Autotransporter beta-domain AVS55_RS08015 PF02545 Maf-like protein AVS55_RS08020 PF02590 Predicted SPOUT methyltransferase AVS55_RS08025 PF02410 Oligomerisation domain AVS55_RS08030 PF01467 Cytidylyltransferase AVS55_RS08035 PF01218 Coproporphyrinogen III oxidase AVS55_RS08040 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVS55_RS08040 PF02843 Phosphoribosylglycinamide synthetase, C domain AVS55_RS08040 PF02844 Phosphoribosylglycinamide synthetase, N domain AVS55_RS08045 PF01709 Transcriptional regulator AVS55_RS08050 PF05872 AVS55_RS08050 AVS55_RS08055 PF01235 AVS55_RS08055 AVS55_RS08060 PF00202 Aminotransferase class-III AVS55_RS08065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS08070 PF00171 Aldehyde dehydrogenase family AVS55_RS08075 PF00892 EamA-like transporter family AVS55_RS08080 PF01546 Peptidase family M20/M25/M40 AVS55_RS08080 PF07687 Peptidase dimerisation domain AVS55_RS08085 PF00850 Histone deacetylase domain AVS55_RS08090 PF07883 Cupin domain AVS55_RS08095 PF00202 Aminotransferase class-III AVS55_RS08100 PF00665 Integrase core domain AVS55_RS08100 PF13011 AVS55_RS08100 AVS55_RS08105 PF00005 ABC transporter AVS55_RS08105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS08110 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS08110 PF12911 AVS55_RS08110 AVS55_RS08115 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS08120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS08125 PF00155 Aminotransferase class I and II AVS55_RS08125 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS08130 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS55_RS08135 PF07690 Major Facilitator Superfamily AVS55_RS08140 PF13437 HlyD family secretion protein AVS55_RS08140 PF13533 Biotin-lipoyl like AVS55_RS08150 PF01047 MarR family AVS55_RS08155 PF00892 EamA-like transporter family AVS55_RS08160 PF00892 EamA-like transporter family AVS55_RS08165 PF00107 Zinc-binding dehydrogenase AVS55_RS08165 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS08170 PF01435 Peptidase family M48 AVS55_RS08180 PF00581 Rhodanese-like domain AVS55_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS08190 PF03466 LysR substrate binding domain AVS55_RS08195 PF00005 ABC transporter AVS55_RS08200 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS08205 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS08210 PF13343 Bacterial extracellular solute-binding protein AVS55_RS08215 PF01266 FAD dependent oxidoreductase AVS55_RS08220 PF00665 Integrase core domain AVS55_RS08220 PF13011 AVS55_RS08220 AVS55_RS08225 PF13343 Bacterial extracellular solute-binding protein AVS55_RS08235 PF00860 Permease family AVS55_RS08240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS08240 PF00672 HAMP domain AVS55_RS08240 PF02203 Tar ligand binding domain homologue AVS55_RS08245 PF01272 Transcription elongation factor, GreA/GreB, C-term AVS55_RS08245 PF03449 Transcription elongation factor, N-terminal AVS55_RS08250 PF00665 Integrase core domain AVS55_RS08250 PF13011 AVS55_RS08250 AVS55_RS08255 PF05932 Tir chaperone protein (CesT) family AVS55_RS08260 PF09392 Type III secretion needle MxiH like AVS55_RS08275 PF00771 FHIPEP family AVS55_RS08285 PF09474 AVS55_RS08285 AVS55_RS08295 PF07201 HrpJ-like domain AVS55_RS08295 PF09059 TyeA AVS55_RS08320 PF04888 AVS55_RS08320 AVS55_RS08335 PF17001 AVS55_RS08335 AVS55_RS08340 PF01514 Secretory protein of YscJ/FliF family AVS55_RS08345 PF06578 AVS55_RS08345 AVS55_RS08350 PF06635 AVS55_RS08350 AVS55_RS08355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS08355 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS55_RS08360 PF07321 Type III secretion protein YscO AVS55_RS08370 PF01052 Surface presentation of antigens (SPOA) AVS55_RS08375 PF00813 AVS55_RS08375 AVS55_RS08380 PF01313 AVS55_RS08380 AVS55_RS08385 PF01311 AVS55_RS08385 AVS55_RS08390 PF01312 FlhB HrpN YscU SpaS Family AVS55_RS08395 PF05932 Tir chaperone protein (CesT) family AVS55_RS08400 PF00263 AVS55_RS08400 AVS55_RS08400 PF03958 Bacterial type II/III secretion system short domain AVS55_RS08405 PF04542 Sigma-70 region 2 AVS55_RS08405 PF08281 Sigma-70, region 4 AVS55_RS08425 PF04392 ABC transporter substrate binding protein AVS55_RS08430 PF00672 HAMP domain AVS55_RS08430 PF07228 Stage II sporulation protein E (SpoIIE) AVS55_RS08430 PF08269 Cache domain AVS55_RS08435 PF07690 Major Facilitator Superfamily AVS55_RS08440 PF00842 Alanine racemase, C-terminal domain AVS55_RS08440 PF01168 Alanine racemase, N-terminal domain AVS55_RS08445 PF13581 Histidine kinase-like ATPase domain AVS55_RS08450 PF01740 STAS domain AVS55_RS08455 PF13091 PLD-like domain AVS55_RS08455 PF13396 AVS55_RS08455 AVS55_RS08465 PF03212 Pertactin AVS55_RS08465 PF03797 Autotransporter beta-domain AVS55_RS08465 PF12951 AVS55_RS08465 AVS55_RS08475 PF00665 Integrase core domain AVS55_RS08475 PF13011 AVS55_RS08475 AVS55_RS08480 PF06808 AVS55_RS08480 AVS55_RS08480 PF11874 AVS55_RS08480 AVS55_RS08485 PF16868 AVS55_RS08485 AVS55_RS08490 PF00202 Aminotransferase class-III AVS55_RS08495 PF01380 SIS domain AVS55_RS08495 PF01418 Helix-turn-helix domain, rpiR family AVS55_RS08500 PF01047 MarR family AVS55_RS08505 PF00583 Acetyltransferase (GNAT) family AVS55_RS08510 PF00665 Integrase core domain AVS55_RS08510 PF13011 AVS55_RS08510 AVS55_RS08515 PF01205 Uncharacterized protein family UPF0029 AVS55_RS08515 PF09186 Domain of unknown function (DUF1949) AVS55_RS08520 PF00085 Thioredoxin AVS55_RS08530 PF00860 Permease family AVS55_RS08535 PF00814 Glycoprotease family AVS55_RS08540 PF01548 AVS55_RS08540 AVS55_RS08540 PF02371 AVS55_RS08540 AVS55_RS08545 PF02660 AVS55_RS08545 AVS55_RS08550 PF01975 Survival protein SurE AVS55_RS08555 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AVS55_RS08560 PF01476 LysM domain AVS55_RS08560 PF01551 Peptidase family M23 AVS55_RS08565 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB AVS55_RS08575 PF09694 AVS55_RS08575 AVS55_RS08580 PF05958 tRNA (Uracil-5-)-methyltransferase AVS55_RS08585 PF00376 MerR family regulatory protein AVS55_RS08585 PF09278 MerR, DNA binding AVS55_RS08590 PF00403 Heavy-metal-associated domain AVS55_RS08595 PF00462 Glutaredoxin AVS55_RS08595 PF08534 Redoxin AVS55_RS08600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS08600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS08605 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ AVS55_RS08610 PF03009 Glycerophosphoryl diester phosphodiesterase family AVS55_RS08615 PF13145 PPIC-type PPIASE domain AVS55_RS08615 PF13624 SurA N-terminal domain AVS55_RS08620 PF13472 GDSL-like Lipase/Acylhydrolase family AVS55_RS08625 PF00005 ABC transporter AVS55_RS08630 PF00665 Integrase core domain AVS55_RS08630 PF13011 AVS55_RS08630 AVS55_RS08635 PF00665 Integrase core domain AVS55_RS08635 PF13011 AVS55_RS08635 AVS55_RS08640 PF04972 BON domain AVS55_RS08645 PF07043 AVS55_RS08645 AVS55_RS08650 PF05532 CsbD-like AVS55_RS08655 PF02222 ATP-grasp domain AVS55_RS08655 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS08655 PF08245 Mur ligase middle domain AVS55_RS08655 PF08443 RimK-like ATP-grasp domain AVS55_RS08660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS08660 PF02875 Mur ligase family, glutamate ligase domain AVS55_RS08660 PF08245 Mur ligase middle domain AVS55_RS08670 PF08909 AVS55_RS08670 AVS55_RS08675 PF04339 AVS55_RS08675 AVS55_RS08680 PF04305 AVS55_RS08680 AVS55_RS08685 PF01471 Putative peptidoglycan binding domain AVS55_RS08685 PF13406 Transglycosylase SLT domain AVS55_RS08690 PF06078 Bacterial protein of unknown function (DUF937) AVS55_RS08700 PF00665 Integrase core domain AVS55_RS08700 PF13011 AVS55_RS08700 AVS55_RS08705 PF01037 AsnC family AVS55_RS08705 PF13412 Winged helix-turn-helix DNA-binding AVS55_RS08715 PF02441 Flavoprotein AVS55_RS08715 PF04127 DNA / pantothenate metabolism flavoprotein AVS55_RS08720 PF01252 AVS55_RS08720 AVS55_RS08725 PF00133 tRNA synthetases class I (I, L, M and V) AVS55_RS08725 PF06827 Zinc finger found in FPG and IleRS AVS55_RS08725 PF08264 Anticodon-binding domain of tRNA AVS55_RS08730 PF01687 Riboflavin kinase AVS55_RS08730 PF06574 FAD synthetase AVS55_RS08735 PF00551 Formyl transferase AVS55_RS08735 PF01189 NOL1/NOP2/sun family AVS55_RS08740 PF00665 Integrase core domain AVS55_RS08740 PF13011 AVS55_RS08740 AVS55_RS08750 PF00487 AVS55_RS08750 AVS55_RS08750 PF01610 AVS55_RS08750 AVS55_RS08755 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS08755 PF13361 UvrD-like helicase C-terminal domain AVS55_RS08760 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS08765 PF00005 ABC transporter AVS55_RS08765 PF12848 ABC transporter AVS55_RS08770 PF05175 Methyltransferase small domain AVS55_RS08775 PF01546 Peptidase family M20/M25/M40 AVS55_RS08775 PF07687 Peptidase dimerisation domain AVS55_RS08780 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS08780 PF14602 Hexapeptide repeat of succinyl-transferase AVS55_RS08780 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVS55_RS08795 PF13663 AVS55_RS08795 AVS55_RS08800 PF03797 Autotransporter beta-domain AVS55_RS08815 PF00313 'Cold-shock' DNA-binding domain AVS55_RS08820 PF06041 Bacterial protein of unknown function (DUF924) AVS55_RS08830 PF03350 AVS55_RS08830 AVS55_RS08835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVS55_RS08835 PF05697 Bacterial trigger factor protein (TF) AVS55_RS08835 PF05698 Bacterial trigger factor protein (TF) C-terminus AVS55_RS08840 PF00574 Clp protease AVS55_RS08845 PF06689 ClpX C4-type zinc finger AVS55_RS08845 PF07724 AAA domain (Cdc48 subfamily) AVS55_RS08845 PF10431 C-terminal, D2-small domain, of ClpB protein AVS55_RS08850 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS08850 PF02190 ATP-dependent protease La (LON) domain AVS55_RS08850 PF05362 Lon protease (S16) C-terminal proteolytic domain AVS55_RS08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS08855 PF03466 LysR substrate binding domain AVS55_RS08860 PF02515 CoA-transferase family III AVS55_RS08865 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS08870 PF01575 MaoC like domain AVS55_RS08875 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS08880 PF01796 AVS55_RS08880 AVS55_RS08880 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) AVS55_RS08885 PF02803 Thiolase, C-terminal domain AVS55_RS08890 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS08895 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS08895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS08905 PF01144 Coenzyme A transferase AVS55_RS08910 PF01144 Coenzyme A transferase AVS55_RS08915 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS08920 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS08930 PF00665 Integrase core domain AVS55_RS08930 PF13011 AVS55_RS08930 AVS55_RS08940 PF03797 Autotransporter beta-domain AVS55_RS08945 PF00717 Peptidase S24-like AVS55_RS08945 PF01726 LexA DNA binding domain AVS55_RS08950 PF00155 Aminotransferase class I and II AVS55_RS08955 PF00271 Helicase conserved C-terminal domain AVS55_RS08955 PF02151 UvrB/uvrC motif AVS55_RS08955 PF04851 Type III restriction enzyme, res subunit AVS55_RS08955 PF12344 Ultra-violet resistance protein B AVS55_RS08960 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVS55_RS08965 PF02082 Transcriptional regulator AVS55_RS08970 PF00266 Aminotransferase class-V AVS55_RS08975 PF01592 NifU-like N terminal domain AVS55_RS08980 PF01521 Iron-sulphur cluster biosynthesis AVS55_RS08985 PF07743 HSCB C-terminal oligomerisation domain AVS55_RS08990 PF00012 Hsp70 protein AVS55_RS08995 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS09000 PF04384 Iron-sulphur cluster assembly AVS55_RS09010 PF00665 Integrase core domain AVS55_RS09010 PF13011 AVS55_RS09010 AVS55_RS09015 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS09020 PF00665 Integrase core domain AVS55_RS09020 PF13011 AVS55_RS09020 AVS55_RS09025 PF03812 AVS55_RS09025 AVS55_RS09030 PF07005 Protein of unknown function, DUF1537 AVS55_RS09030 PF17042 AVS55_RS09030 AVS55_RS09035 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVS55_RS09040 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS09040 PF07702 UTRA domain AVS55_RS09045 PF03473 MOSC domain AVS55_RS09045 PF03476 MOSC N-terminal beta barrel domain AVS55_RS09050 PF02261 Aspartate decarboxylase AVS55_RS09055 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS09055 PF00175 Oxidoreductase NAD-binding domain AVS55_RS09055 PF00970 Oxidoreductase FAD-binding domain AVS55_RS09060 PF01266 FAD dependent oxidoreductase AVS55_RS09065 PF13416 Bacterial extracellular solute-binding protein AVS55_RS09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS09070 PF03466 LysR substrate binding domain AVS55_RS09075 PF07287 AVS55_RS09075 AVS55_RS09085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS09090 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS09095 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS09095 PF12911 AVS55_RS09095 AVS55_RS09100 PF00005 ABC transporter AVS55_RS09100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS09105 PF01425 Amidase AVS55_RS09120 PF06864 AVS55_RS09120 AVS55_RS09130 PF00437 Type II/IV secretion system protein AVS55_RS09140 PF08805 PilS N terminal AVS55_RS09150 PF01411 tRNA synthetases class II (A) AVS55_RS09150 PF02272 DHHA1 domain AVS55_RS09150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVS55_RS09155 PF01206 Sulfurtransferase TusA AVS55_RS09165 PF00886 Ribosomal protein S16 AVS55_RS09170 PF01782 RimM N-terminal domain AVS55_RS09175 PF01746 tRNA (Guanine-1)-methyltransferase AVS55_RS09180 PF00266 Aminotransferase class-V AVS55_RS09185 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AVS55_RS09190 PF00665 Integrase core domain AVS55_RS09190 PF13011 AVS55_RS09190 AVS55_RS09195 PF00665 Integrase core domain AVS55_RS09195 PF13011 AVS55_RS09195 AVS55_RS09200 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS09205 PF00072 Response regulator receiver domain AVS55_RS09210 PF06629 AVS55_RS09210 AVS55_RS09215 PF00133 tRNA synthetases class I (I, L, M and V) AVS55_RS09215 PF08264 Anticodon-binding domain of tRNA AVS55_RS09215 PF10458 Valyl tRNA synthetase tRNA binding arm AVS55_RS09220 PF00334 Nucleoside diphosphate kinase AVS55_RS09225 PF04055 Radical SAM superfamily AVS55_RS09230 PF13413 Helix-turn-helix domain AVS55_RS09235 PF04551 GcpE protein AVS55_RS09240 PF03129 Anticodon binding domain AVS55_RS09240 PF13393 Histidyl-tRNA synthetase AVS55_RS09245 PF09976 Tetratricopeptide repeat AVS55_RS09250 PF13360 PQQ-like domain AVS55_RS09255 PF01926 50S ribosome-binding GTPase AVS55_RS09255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVS55_RS09260 PF00155 Aminotransferase class I and II AVS55_RS09270 PF01926 50S ribosome-binding GTPase AVS55_RS09270 PF13167 AVS55_RS09270 AVS55_RS09270 PF16360 AVS55_RS09270 AVS55_RS09275 PF01145 SPFH domain / Band 7 family AVS55_RS09275 PF12221 AVS55_RS09275 AVS55_RS09280 PF01145 SPFH domain / Band 7 family AVS55_RS09285 PF13393 Histidyl-tRNA synthetase AVS55_RS09290 PF00709 Adenylosuccinate synthetase AVS55_RS09295 PF00156 Phosphoribosyl transferase domain AVS55_RS09300 PF01165 Ribosomal protein S21 AVS55_RS09305 PF01807 CHC2 zinc finger AVS55_RS09305 PF08275 DNA primase catalytic core, N-terminal domain AVS55_RS09305 PF08278 DNA primase DnaG DnaB-binding AVS55_RS09305 PF10410 DnaB-helicase binding domain of primase AVS55_RS09305 PF13662 Toprim domain AVS55_RS09310 PF00140 Sigma-70 factor, region 1 AVS55_RS09310 PF03979 Sigma-70 factor, region 1 AVS55_RS09310 PF04539 Sigma-70 region 3 AVS55_RS09310 PF04542 Sigma-70 region 2 AVS55_RS09310 PF04545 Sigma-70, region 4 AVS55_RS09310 PF04546 Sigma-70, non-essential region AVS55_RS09330 PF00665 Integrase core domain AVS55_RS09330 PF13011 AVS55_RS09330 AVS55_RS09335 PF00665 Integrase core domain AVS55_RS09335 PF13011 AVS55_RS09335 AVS55_RS09345 PF01594 AVS55_RS09345 AVS55_RS09350 PF01061 AVS55_RS09350 AVS55_RS09355 PF00005 ABC transporter AVS55_RS09360 PF13527 Acetyltransferase (GNAT) domain AVS55_RS09365 PF01925 AVS55_RS09365 AVS55_RS09380 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVS55_RS09380 PF12801 AVS55_RS09380 AVS55_RS09380 PF13746 4Fe-4S dicluster domain AVS55_RS09385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS09385 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVS55_RS09395 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO AVS55_RS09405 PF03597 AVS55_RS09405 AVS55_RS09410 PF00122 E1-E2 ATPase AVS55_RS09415 PF00665 Integrase core domain AVS55_RS09415 PF13011 AVS55_RS09415 AVS55_RS09420 PF00202 Aminotransferase class-III AVS55_RS09425 PF00155 Aminotransferase class I and II AVS55_RS09435 PF13500 AAA domain AVS55_RS09435 PF13649 Methyltransferase domain AVS55_RS09440 PF03788 AVS55_RS09440 AVS55_RS09450 PF00665 Integrase core domain AVS55_RS09450 PF13011 AVS55_RS09450 AVS55_RS09455 PF00158 Sigma-54 interaction domain AVS55_RS09455 PF01590 GAF domain AVS55_RS09455 PF02954 Bacterial regulatory protein, Fis family AVS55_RS09460 PF00171 Aldehyde dehydrogenase family AVS55_RS09465 PF02525 Flavodoxin-like fold AVS55_RS09475 PF04286 AVS55_RS09475 AVS55_RS09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS09480 PF03466 LysR substrate binding domain AVS55_RS09485 PF02567 Phenazine biosynthesis-like protein AVS55_RS09490 PF07237 Protein of unknown function (DUF1428) AVS55_RS09495 PF01965 DJ-1/PfpI family AVS55_RS09495 PF12833 Helix-turn-helix domain AVS55_RS09500 PF11450 AVS55_RS09500 AVS55_RS09505 PF03625 Domain of unknown function DUF302 AVS55_RS09510 PF12697 Alpha/beta hydrolase family AVS55_RS09515 PF12840 Helix-turn-helix domain AVS55_RS09520 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AVS55_RS09525 PF00916 AVS55_RS09525 AVS55_RS09525 PF01740 STAS domain AVS55_RS09530 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS09530 PF07729 FCD domain AVS55_RS09540 PF02535 AVS55_RS09540 AVS55_RS09550 PF00005 ABC transporter AVS55_RS09550 PF00664 ABC transporter transmembrane region AVS55_RS09555 PF00665 Integrase core domain AVS55_RS09555 PF13011 AVS55_RS09555 AVS55_RS09560 PF00583 Acetyltransferase (GNAT) family AVS55_RS09565 PF00665 Integrase core domain AVS55_RS09565 PF13011 AVS55_RS09565 AVS55_RS09570 PF04828 Glutathione-dependent formaldehyde-activating enzyme AVS55_RS09575 PF07690 Major Facilitator Superfamily AVS55_RS09580 PF06983 3-demethylubiquinone-9 3-methyltransferase AVS55_RS09585 PF02190 ATP-dependent protease La (LON) domain AVS55_RS09595 PF06719 AVS55_RS09595 AVS55_RS09595 PF12833 Helix-turn-helix domain AVS55_RS09600 PF02625 XdhC and CoxI family AVS55_RS09600 PF13478 XdhC Rossmann domain AVS55_RS09605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS55_RS09610 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS09610 PF01799 [2Fe-2S] binding domain AVS55_RS09615 PF11720 Peptidase inhibitor I78 family AVS55_RS09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS09620 PF03466 LysR substrate binding domain AVS55_RS09625 PF01243 Pyridoxamine 5'-phosphate oxidase AVS55_RS09640 PF01548 AVS55_RS09640 AVS55_RS09640 PF02371 AVS55_RS09640 AVS55_RS09645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS09645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS09655 PF00665 Integrase core domain AVS55_RS09655 PF13011 AVS55_RS09655 AVS55_RS09660 PF00665 Integrase core domain AVS55_RS09660 PF13011 AVS55_RS09660 AVS55_RS09665 PF13545 Crp-like helix-turn-helix domain AVS55_RS09675 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS09680 PF01522 Polysaccharide deacetylase AVS55_RS09685 PF00561 alpha/beta hydrolase fold AVS55_RS09690 PF01425 Amidase AVS55_RS09695 PF01425 Amidase AVS55_RS09700 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS09710 PF07171 MlrC C-terminus AVS55_RS09710 PF07364 Protein of unknown function (DUF1485) AVS55_RS09715 PF03372 Endonuclease/Exonuclease/phosphatase family AVS55_RS09725 PF05940 AVS55_RS09725 AVS55_RS09730 PF01152 Bacterial-like globin AVS55_RS09735 PF10262 Rdx family AVS55_RS09740 PF00665 Integrase core domain AVS55_RS09740 PF13011 AVS55_RS09740 AVS55_RS09750 PF00665 Integrase core domain AVS55_RS09750 PF13011 AVS55_RS09750 AVS55_RS09755 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS09770 PF01796 AVS55_RS09770 AVS55_RS09770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVS55_RS09775 PF00108 Thiolase, N-terminal domain AVS55_RS09775 PF02803 Thiolase, C-terminal domain AVS55_RS09780 PF00501 AMP-binding enzyme AVS55_RS09780 PF14535 AMP-binding enzyme C-terminal domain AVS55_RS09785 PF07859 alpha/beta hydrolase fold AVS55_RS09790 PF02515 CoA-transferase family III AVS55_RS09795 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS09800 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS09805 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS09810 PF00866 Ring hydroxylating beta subunit AVS55_RS09815 PF00355 Rieske [2Fe-2S] domain AVS55_RS09815 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS55_RS09820 PF13458 Periplasmic binding protein AVS55_RS09825 PF02653 AVS55_RS09825 AVS55_RS09830 PF02653 AVS55_RS09830 AVS55_RS09835 PF00665 Integrase core domain AVS55_RS09835 PF13011 AVS55_RS09835 AVS55_RS09845 PF00463 Isocitrate lyase family AVS55_RS09850 PF14489 QueF-like protein AVS55_RS09850 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AVS55_RS09860 PF07690 Major Facilitator Superfamily AVS55_RS09865 PF01066 CDP-alcohol phosphatidyltransferase AVS55_RS09870 PF01541 GIY-YIG catalytic domain AVS55_RS09870 PF02151 UvrB/uvrC motif AVS55_RS09870 PF08459 UvrC Helix-hairpin-helix N-terminal AVS55_RS09870 PF14520 Helix-hairpin-helix domain AVS55_RS09875 PF00933 Glycosyl hydrolase family 3 N terminal domain AVS55_RS09880 PF01648 4'-phosphopantetheinyl transferase superfamily AVS55_RS09885 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVS55_RS09890 PF02321 Outer membrane efflux protein AVS55_RS09895 PF00873 AcrB/AcrD/AcrF family AVS55_RS09900 PF16576 AVS55_RS09900 AVS55_RS09905 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS09910 PF01734 Patatin-like phospholipase AVS55_RS09910 PF12536 AVS55_RS09910 AVS55_RS09915 PF13590 Domain of unknown function (DUF4136) AVS55_RS09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS09920 PF03459 TOBE domain AVS55_RS09925 PF00005 ABC transporter AVS55_RS09935 PF04392 ABC transporter substrate binding protein AVS55_RS09940 PF00080 Copper/zinc superoxide dismutase (SODC) AVS55_RS09945 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS09955 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS09960 PF05292 Malonyl-CoA decarboxylase (MCD) AVS55_RS09965 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS09965 PF07729 FCD domain AVS55_RS09975 PF00108 Thiolase, N-terminal domain AVS55_RS09975 PF02803 Thiolase, C-terminal domain AVS55_RS09980 PF01361 Tautomerase enzyme AVS55_RS09985 PF00005 ABC transporter AVS55_RS09990 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS09995 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AVS55_RS10000 PF00665 Integrase core domain AVS55_RS10000 PF13011 AVS55_RS10000 AVS55_RS10005 PF02353 Mycolic acid cyclopropane synthetase AVS55_RS10010 PF07690 Major Facilitator Superfamily AVS55_RS10015 PF00830 Ribosomal L28 family AVS55_RS10020 PF00471 Ribosomal protein L33 AVS55_RS10025 PF00916 AVS55_RS10025 AVS55_RS10025 PF01740 STAS domain AVS55_RS10030 PF00665 Integrase core domain AVS55_RS10030 PF13011 AVS55_RS10030 AVS55_RS10035 PF00665 Integrase core domain AVS55_RS10035 PF13011 AVS55_RS10035 AVS55_RS10040 PF00216 Bacterial DNA-binding protein AVS55_RS10045 PF01047 MarR family AVS55_RS10050 PF07690 Major Facilitator Superfamily AVS55_RS10055 PF00133 tRNA synthetases class I (I, L, M and V) AVS55_RS10055 PF08264 Anticodon-binding domain of tRNA AVS55_RS10055 PF09334 tRNA synthetases class I (M) AVS55_RS10055 PF13603 Leucyl-tRNA synthetase, Domain 2 AVS55_RS10060 PF04390 Lipopolysaccharide-assembly AVS55_RS10065 PF06144 DNA polymerase III, delta subunit AVS55_RS10070 PF00171 Aldehyde dehydrogenase family AVS55_RS10080 PF01425 Amidase AVS55_RS10085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS10085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS10090 PF14542 GCN5-related N-acetyl-transferase AVS55_RS10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS10130 PF03466 LysR substrate binding domain AVS55_RS10140 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVS55_RS10140 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVS55_RS10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS10145 PF03466 LysR substrate binding domain AVS55_RS10155 PF00665 Integrase core domain AVS55_RS10155 PF13011 AVS55_RS10155 AVS55_RS10165 PF01925 AVS55_RS10165 AVS55_RS10170 PF00892 EamA-like transporter family AVS55_RS10175 PF03795 YCII-related domain AVS55_RS10180 PF03992 Antibiotic biosynthesis monooxygenase AVS55_RS10185 PF12643 AVS55_RS10185 AVS55_RS10190 PF00929 Exonuclease AVS55_RS10195 PF00330 Aconitase family (aconitate hydratase) AVS55_RS10195 PF06434 Aconitate hydratase 2 N-terminus AVS55_RS10195 PF11791 Aconitate B N-terminal domain AVS55_RS10205 PF00691 OmpA family AVS55_RS10210 PF00665 Integrase core domain AVS55_RS10210 PF13011 AVS55_RS10210 AVS55_RS10215 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS10220 PF00593 TonB dependent receptor AVS55_RS10220 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS10230 PF00330 Aconitase family (aconitate hydratase) AVS55_RS10230 PF00694 Aconitase C-terminal domain AVS55_RS10235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVS55_RS10240 PF11062 AVS55_RS10240 AVS55_RS10245 PF10093 AVS55_RS10245 AVS55_RS10250 PF01132 Elongation factor P (EF-P) OB domain AVS55_RS10250 PF08207 Elongation factor P (EF-P) KOW-like domain AVS55_RS10250 PF09285 Elongation factor P, C-terminal AVS55_RS10255 PF00034 Cytochrome c AVS55_RS10260 PF13668 Ferritin-like domain AVS55_RS10265 PF04542 Sigma-70 region 2 AVS55_RS10265 PF08281 Sigma-70, region 4 AVS55_RS10270 PF06676 AVS55_RS10270 AVS55_RS10275 PF11180 AVS55_RS10275 AVS55_RS10280 PF00158 Sigma-54 interaction domain AVS55_RS10280 PF02954 Bacterial regulatory protein, Fis family AVS55_RS10285 PF09977 AVS55_RS10285 AVS55_RS10295 PF13432 Tetratricopeptide repeat AVS55_RS10300 PF00482 Type II secretion system (T2SS), protein F AVS55_RS10305 PF00482 Type II secretion system (T2SS), protein F AVS55_RS10310 PF00437 Type II/IV secretion system protein AVS55_RS10320 PF00263 AVS55_RS10320 AVS55_RS10320 PF13629 AVS55_RS10320 AVS55_RS10325 PF08666 SAF domain AVS55_RS10325 PF16976 AVS55_RS10325 AVS55_RS10330 PF07811 AVS55_RS10330 AVS55_RS10335 PF07811 AVS55_RS10335 AVS55_RS10340 PF01478 Type IV leader peptidase family AVS55_RS10345 PF04964 AVS55_RS10345 AVS55_RS10350 PF03707 AVS55_RS10350 AVS55_RS10355 PF08479 POTRA domain, ShlB-type AVS55_RS10365 PF00665 Integrase core domain AVS55_RS10365 PF13011 AVS55_RS10365 AVS55_RS10370 PF12802 MarR family AVS55_RS10375 PF00005 ABC transporter AVS55_RS10375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS10380 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10385 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS10395 PF00565 Staphylococcal nuclease homologue AVS55_RS10400 PF01544 CorA-like Mg2+ transporter protein AVS55_RS10405 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS10405 PF13361 UvrD-like helicase C-terminal domain AVS55_RS10410 PF01904 Protein of unknown function DUF72 AVS55_RS10415 PF00155 Aminotransferase class I and II AVS55_RS10415 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS10420 PF00202 Aminotransferase class-III AVS55_RS10425 PF00171 Aldehyde dehydrogenase family AVS55_RS10430 PF00459 Inositol monophosphatase family AVS55_RS10435 PF02146 Sir2 family AVS55_RS10440 PF07690 Major Facilitator Superfamily AVS55_RS10445 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS10450 PF00342 Phosphoglucose isomerase AVS55_RS10455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS55_RS10455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS55_RS10455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS55_RS10455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS55_RS10460 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS10465 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS10465 PF00665 Integrase core domain AVS55_RS10465 PF13011 AVS55_RS10465 AVS55_RS10470 PF13463 Winged helix DNA-binding domain AVS55_RS10485 PF13432 Tetratricopeptide repeat AVS55_RS10485 PF14559 Tetratricopeptide repeat AVS55_RS10490 PF01522 Polysaccharide deacetylase AVS55_RS10490 PF14883 Hypothetical glycosyl hydrolase family 13 AVS55_RS10495 PF13641 Glycosyltransferase like family 2 AVS55_RS10505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS55_RS10510 PF12840 Helix-turn-helix domain AVS55_RS10520 PF01575 MaoC like domain AVS55_RS10525 PF01575 MaoC like domain AVS55_RS10530 PF01042 Endoribonuclease L-PSP AVS55_RS10535 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS10540 PF13380 CoA binding domain AVS55_RS10540 PF13549 ATP-grasp domain AVS55_RS10540 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS10545 PF01614 Bacterial transcriptional regulator AVS55_RS10545 PF09339 IclR helix-turn-helix domain AVS55_RS10550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS55_RS10560 PF00005 ABC transporter AVS55_RS10560 PF08402 TOBE domain AVS55_RS10565 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10570 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS10575 PF07969 Amidohydrolase family AVS55_RS10580 PF07969 Amidohydrolase family AVS55_RS10585 PF13416 Bacterial extracellular solute-binding protein AVS55_RS10590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS10590 PF03466 LysR substrate binding domain AVS55_RS10595 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS10600 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS10605 PF01958 Domain of unknown function DUF108 AVS55_RS10605 PF03447 Homoserine dehydrogenase, NAD binding domain AVS55_RS10610 PF00561 alpha/beta hydrolase fold AVS55_RS10615 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS10620 PF06808 AVS55_RS10620 AVS55_RS10625 PF04290 AVS55_RS10625 AVS55_RS10630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS55_RS10630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS55_RS10635 PF07978 NIPSNAP AVS55_RS10640 PF07883 Cupin domain AVS55_RS10645 PF01548 AVS55_RS10645 AVS55_RS10645 PF02371 AVS55_RS10645 AVS55_RS10655 PF00696 Amino acid kinase family AVS55_RS10655 PF01842 ACT domain AVS55_RS10655 PF13840 ACT domain AVS55_RS10660 PF01171 PP-loop family AVS55_RS10660 PF09179 TilS substrate binding domain AVS55_RS10665 PF00665 Integrase core domain AVS55_RS10665 PF13011 AVS55_RS10665 AVS55_RS10670 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVS55_RS10675 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS55_RS10680 PF01406 tRNA synthetases class I (C) catalytic domain AVS55_RS10680 PF09190 DALR domain AVS55_RS10685 PF14559 Tetratricopeptide repeat AVS55_RS10690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVS55_RS10695 PF00149 Calcineurin-like phosphoesterase AVS55_RS10700 PF02673 AVS55_RS10700 AVS55_RS10705 PF00571 CBS domain AVS55_RS10705 PF03471 Transporter associated domain AVS55_RS10705 PF03741 AVS55_RS10705 AVS55_RS10710 PF00459 Inositol monophosphatase family AVS55_RS10715 PF00588 SpoU rRNA Methylase family AVS55_RS10720 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS10725 PF01614 Bacterial transcriptional regulator AVS55_RS10725 PF09339 IclR helix-turn-helix domain AVS55_RS10730 PF00924 Mechanosensitive ion channel AVS55_RS10740 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase AVS55_RS10745 PF01968 Hydantoinase/oxoprolinase AVS55_RS10745 PF02538 AVS55_RS10745 AVS55_RS10745 PF05378 AVS55_RS10745 AVS55_RS10750 PF13463 Winged helix DNA-binding domain AVS55_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS10755 PF03466 LysR substrate binding domain AVS55_RS10765 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS10770 PF04290 AVS55_RS10770 AVS55_RS10780 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS10785 PF04290 AVS55_RS10785 AVS55_RS10795 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AVS55_RS10795 PF08479 POTRA domain, ShlB-type AVS55_RS10805 PF00577 Outer membrane usher protein AVS55_RS10805 PF13953 PapC C-terminal domain AVS55_RS10805 PF13954 PapC N-terminal domain AVS55_RS10810 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AVS55_RS10810 PF02753 Pili assembly chaperone PapD, C-terminal domain AVS55_RS10815 PF16970 AVS55_RS10815 AVS55_RS10825 PF13018 AVS55_RS10825 AVS55_RS10830 PF00072 Response regulator receiver domain AVS55_RS10830 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS10835 PF00072 Response regulator receiver domain AVS55_RS10835 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS10835 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS10835 PF00989 PAS fold AVS55_RS10835 PF01627 Hpt domain AVS55_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS10840 PF00563 EAL domain AVS55_RS10845 PF07286 Protein of unknown function (DUF1445) AVS55_RS10850 PF01425 Amidase AVS55_RS10865 PF00665 Integrase core domain AVS55_RS10870 PF00034 Cytochrome c AVS55_RS10875 PF04343 AVS55_RS10875 AVS55_RS10880 PF00665 Integrase core domain AVS55_RS10880 PF13011 AVS55_RS10880 AVS55_RS10885 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS10885 PF07729 FCD domain AVS55_RS10890 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS10895 PF04290 AVS55_RS10895 AVS55_RS10900 PF06808 AVS55_RS10900 AVS55_RS10905 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS55_RS10910 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS10910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS10910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS10915 PF01546 Peptidase family M20/M25/M40 AVS55_RS10915 PF07687 Peptidase dimerisation domain AVS55_RS10920 PF00171 Aldehyde dehydrogenase family AVS55_RS10925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVS55_RS10925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVS55_RS10935 PF00005 ABC transporter AVS55_RS10945 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS10950 PF01614 Bacterial transcriptional regulator AVS55_RS10950 PF09339 IclR helix-turn-helix domain AVS55_RS10955 PF12796 Ankyrin repeats (3 copies) AVS55_RS10960 PF01026 TatD related DNase AVS55_RS10965 PF13177 DNA polymerase III, delta subunit AVS55_RS10970 PF02223 Thymidylate kinase AVS55_RS10975 PF02618 YceG-like family AVS55_RS10985 PF00665 Integrase core domain AVS55_RS10985 PF13011 AVS55_RS10985 AVS55_RS10990 PF07733 Bacterial DNA polymerase III alpha subunit AVS55_RS10995 PF14579 Helix-hairpin-helix motif AVS55_RS11000 PF01266 FAD dependent oxidoreductase AVS55_RS11005 PF02082 Transcriptional regulator AVS55_RS11010 PF00042 Globin AVS55_RS11010 PF00175 Oxidoreductase NAD-binding domain AVS55_RS11010 PF00970 Oxidoreductase FAD-binding domain AVS55_RS11015 PF09424 Yqey-like protein AVS55_RS11020 PF00665 Integrase core domain AVS55_RS11020 PF13011 AVS55_RS11020 AVS55_RS11025 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS11030 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS11035 PF09084 NMT1/THI5 like AVS55_RS11040 PF00005 ABC transporter AVS55_RS11045 PF00005 ABC transporter AVS55_RS11045 PF12848 ABC transporter AVS55_RS11050 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS11055 PF04290 AVS55_RS11055 AVS55_RS11060 PF06808 AVS55_RS11060 AVS55_RS11065 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS11070 PF02016 LD-carboxypeptidase AVS55_RS11075 PF14437 AVS55_RS11075 AVS55_RS11080 PF12710 haloacid dehalogenase-like hydrolase AVS55_RS11090 PF00665 Integrase core domain AVS55_RS11090 PF13011 AVS55_RS11090 AVS55_RS11095 PF03334 AVS55_RS11095 AVS55_RS11100 PF04066 AVS55_RS11100 AVS55_RS11105 PF01899 AVS55_RS11105 AVS55_RS11110 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AVS55_RS11115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVS55_RS11120 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AVS55_RS11120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVS55_RS11120 PF04039 AVS55_RS11120 AVS55_RS11120 PF13244 AVS55_RS11120 AVS55_RS11125 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11130 PF00665 Integrase core domain AVS55_RS11130 PF13011 AVS55_RS11130 AVS55_RS11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11140 PF03466 LysR substrate binding domain AVS55_RS11145 PF00106 short chain dehydrogenase AVS55_RS11150 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11155 PF07969 Amidohydrolase family AVS55_RS11160 PF12840 Helix-turn-helix domain AVS55_RS11165 PF07690 Major Facilitator Superfamily AVS55_RS11175 PF03358 NADPH-dependent FMN reductase AVS55_RS11185 PF00665 Integrase core domain AVS55_RS11185 PF13011 AVS55_RS11185 AVS55_RS11200 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11205 PF03466 LysR substrate binding domain AVS55_RS11210 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11215 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS11220 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS11225 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS55_RS11230 PF01070 FMN-dependent dehydrogenase AVS55_RS11235 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS11240 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11245 PF03466 LysR substrate binding domain AVS55_RS11250 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS55_RS11255 PF02798 Glutathione S-transferase, N-terminal domain AVS55_RS11255 PF14497 Glutathione S-transferase, C-terminal domain AVS55_RS11260 PF06296 AVS55_RS11260 AVS55_RS11265 PF01381 Helix-turn-helix AVS55_RS11270 PF03797 Autotransporter beta-domain AVS55_RS11270 PF12951 AVS55_RS11270 AVS55_RS11275 PF00072 Response regulator receiver domain AVS55_RS11275 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS11280 PF07695 AVS55_RS11280 AVS55_RS11290 PF00665 Integrase core domain AVS55_RS11290 PF13011 AVS55_RS11290 AVS55_RS11300 PF00884 Sulfatase AVS55_RS11305 PF12710 haloacid dehalogenase-like hydrolase AVS55_RS11310 PF13584 AVS55_RS11310 AVS55_RS11315 PF00092 von Willebrand factor type A domain AVS55_RS11315 PF07719 Tetratricopeptide repeat AVS55_RS11320 PF00092 von Willebrand factor type A domain AVS55_RS11325 PF14316 AVS55_RS11325 AVS55_RS11330 PF01882 AVS55_RS11330 AVS55_RS11335 PF07726 ATPase family associated with various cellular activities (AAA) AVS55_RS11345 PF13557 AVS55_RS11345 AVS55_RS11350 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS11355 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS11360 PF03741 AVS55_RS11360 AVS55_RS11365 PF00665 Integrase core domain AVS55_RS11365 PF13011 AVS55_RS11365 AVS55_RS11375 PF00005 ABC transporter AVS55_RS11375 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS11380 PF00005 ABC transporter AVS55_RS11385 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS11390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS11390 PF14759 Reductase C-terminal AVS55_RS11395 PF00665 Integrase core domain AVS55_RS11395 PF13011 AVS55_RS11395 AVS55_RS11400 PF00884 Sulfatase AVS55_RS11405 PF00106 short chain dehydrogenase AVS55_RS11410 PF00665 Integrase core domain AVS55_RS11410 PF13011 AVS55_RS11410 AVS55_RS11415 PF05159 AVS55_RS11415 AVS55_RS11420 PF05159 AVS55_RS11420 AVS55_RS11425 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS11430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS55_RS11430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS55_RS11430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS55_RS11435 PF02563 Polysaccharide biosynthesis/export protein AVS55_RS11435 PF10531 SLBB domain AVS55_RS11445 PF00534 Glycosyl transferases group 1 AVS55_RS11445 PF13439 Glycosyltransferase Family 4 AVS55_RS11450 PF02706 Chain length determinant protein AVS55_RS11455 PF00005 ABC transporter AVS55_RS11460 PF01061 AVS55_RS11460 AVS55_RS11465 PF00535 Glycosyl transferase family 2 AVS55_RS11480 PF00210 Ferritin-like domain AVS55_RS11485 PF00171 Aldehyde dehydrogenase family AVS55_RS11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11490 PF03466 LysR substrate binding domain AVS55_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11495 PF03466 LysR substrate binding domain AVS55_RS11500 PF00270 DEAD/DEAH box helicase AVS55_RS11500 PF00271 Helicase conserved C-terminal domain AVS55_RS11500 PF17191 AVS55_RS11500 AVS55_RS11505 PF01042 Endoribonuclease L-PSP AVS55_RS11515 PF00248 Aldo/keto reductase family AVS55_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11525 PF03466 LysR substrate binding domain AVS55_RS11530 PF00175 Oxidoreductase NAD-binding domain AVS55_RS11530 PF00970 Oxidoreductase FAD-binding domain AVS55_RS11535 PF13343 Bacterial extracellular solute-binding protein AVS55_RS11540 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS11545 PF00005 ABC transporter AVS55_RS11550 PF00665 Integrase core domain AVS55_RS11550 PF13011 AVS55_RS11550 AVS55_RS11555 PF02678 Pirin AVS55_RS11555 PF05726 Pirin C-terminal cupin domain AVS55_RS11560 PF02678 Pirin AVS55_RS11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11565 PF03466 LysR substrate binding domain AVS55_RS11570 PF00072 Response regulator receiver domain AVS55_RS11570 PF00158 Sigma-54 interaction domain AVS55_RS11570 PF02954 Bacterial regulatory protein, Fis family AVS55_RS11575 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS11575 PF08448 PAS fold AVS55_RS11580 PF00120 Glutamine synthetase, catalytic domain AVS55_RS11580 PF03951 Glutamine synthetase, beta-Grasp domain AVS55_RS11585 PF04055 Radical SAM superfamily AVS55_RS11585 PF06969 HemN C-terminal domain AVS55_RS11590 PF00665 Integrase core domain AVS55_RS11590 PF13011 AVS55_RS11590 AVS55_RS11595 PF01725 Ham1 family AVS55_RS11600 PF00563 EAL domain AVS55_RS11600 PF00990 GGDEF domain AVS55_RS11605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS11605 PF00672 HAMP domain AVS55_RS11605 PF02203 Tar ligand binding domain homologue AVS55_RS11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11610 PF03466 LysR substrate binding domain AVS55_RS11615 PF03972 MmgE/PrpD family AVS55_RS11620 PF01138 3' exoribonuclease family, domain 1 AVS55_RS11620 PF03725 3' exoribonuclease family, domain 2 AVS55_RS11625 PF03755 AVS55_RS11625 AVS55_RS11625 PF08340 AVS55_RS11625 AVS55_RS11640 PF01381 Helix-turn-helix AVS55_RS11645 PF01048 Phosphorylase superfamily AVS55_RS11645 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AVS55_RS11650 PF00877 NlpC/P60 family AVS55_RS11655 PF00106 short chain dehydrogenase AVS55_RS11660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS11665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS11670 PF00625 Guanylate kinase AVS55_RS11675 PF01192 RNA polymerase Rpb6 AVS55_RS11680 PF02824 TGS domain AVS55_RS11680 PF04607 Region found in RelA / SpoT proteins AVS55_RS11680 PF13291 ACT domain AVS55_RS11680 PF13328 HD domain AVS55_RS11685 PF00005 ABC transporter AVS55_RS11690 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS11695 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS11700 PF00665 Integrase core domain AVS55_RS11700 PF13011 AVS55_RS11700 AVS55_RS11710 PF02163 Peptidase family M50 AVS55_RS11715 PF00701 Dihydrodipicolinate synthetase family AVS55_RS11720 PF06804 NlpB/DapX lipoprotein AVS55_RS11725 PF16970 AVS55_RS11725 AVS55_RS11730 PF08007 Cupin superfamily protein AVS55_RS11735 PF00488 MutS domain V AVS55_RS11735 PF01624 MutS domain I AVS55_RS11735 PF05188 MutS domain II AVS55_RS11735 PF05190 MutS family domain IV AVS55_RS11735 PF05192 MutS domain III AVS55_RS11740 PF07311 Dodecin AVS55_RS11745 PF03358 NADPH-dependent FMN reductase AVS55_RS11755 PF09375 Imelysin AVS55_RS11760 PF00665 Integrase core domain AVS55_RS11760 PF13011 AVS55_RS11760 AVS55_RS11765 PF06537 AVS55_RS11765 AVS55_RS11770 PF09375 Imelysin AVS55_RS11775 PF07433 AVS55_RS11775 AVS55_RS11785 PF00665 Integrase core domain AVS55_RS11785 PF13011 AVS55_RS11785 AVS55_RS11790 PF01300 Telomere recombination AVS55_RS11795 PF04228 AVS55_RS11795 AVS55_RS11810 PF00665 Integrase core domain AVS55_RS11810 PF13011 AVS55_RS11810 AVS55_RS11815 PF02132 RecR protein AVS55_RS11815 PF13662 Toprim domain AVS55_RS11820 PF02575 YbaB/EbfC DNA-binding family AVS55_RS11825 PF12169 DNA polymerase III subunits gamma and tau domain III AVS55_RS11825 PF13177 DNA polymerase III, delta subunit AVS55_RS11840 PF00580 UvrD/REP helicase N-terminal domain AVS55_RS11840 PF12705 PD-(D/E)XK nuclease superfamily AVS55_RS11840 PF13361 UvrD-like helicase C-terminal domain AVS55_RS11845 PF12705 PD-(D/E)XK nuclease superfamily AVS55_RS11850 PF07690 Major Facilitator Superfamily AVS55_RS11860 PF00768 D-alanyl-D-alanine carboxypeptidase AVS55_RS11865 PF00665 Integrase core domain AVS55_RS11865 PF13011 AVS55_RS11865 AVS55_RS11870 PF13467 Ribbon-helix-helix domain AVS55_RS11875 PF01965 DJ-1/PfpI family AVS55_RS11880 PF04073 Aminoacyl-tRNA editing domain AVS55_RS11885 PF00589 Phage integrase family AVS55_RS11885 PF02899 Phage integrase, N-terminal SAM-like domain AVS55_RS11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS11890 PF03466 LysR substrate binding domain AVS55_RS11895 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS11895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS11895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS11900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS11900 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS11900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS11905 PF01575 MaoC like domain AVS55_RS11910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS11910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS11915 PF00005 ABC transporter AVS55_RS11920 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS11925 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS11930 PF00491 Arginase family AVS55_RS11935 PF01614 Bacterial transcriptional regulator AVS55_RS11935 PF09339 IclR helix-turn-helix domain AVS55_RS11940 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS11945 PF01300 Telomere recombination AVS55_RS11945 PF03481 Putative GTP-binding controlling metal-binding AVS55_RS11950 PF02222 ATP-grasp domain AVS55_RS11955 PF00731 AIR carboxylase AVS55_RS11960 PF02600 Disulfide bond formation protein DsbB AVS55_RS11970 PF15731 AVS55_RS11970 AVS55_RS11975 PF15723 AVS55_RS11975 AVS55_RS11980 PF01259 SAICAR synthetase AVS55_RS11985 PF04828 Glutathione-dependent formaldehyde-activating enzyme AVS55_RS11990 PF01116 Fructose-bisphosphate aldolase class-II AVS55_RS12000 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS12005 PF03069 Acetamidase/Formamidase family AVS55_RS12010 PF02293 AmiS/UreI family transporter AVS55_RS12015 PF09723 AVS55_RS12015 AVS55_RS12020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS55_RS12020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS12025 PF04828 Glutathione-dependent formaldehyde-activating enzyme AVS55_RS12030 PF00665 Integrase core domain AVS55_RS12030 PF13011 AVS55_RS12030 AVS55_RS12035 PF00005 ABC transporter AVS55_RS12040 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12045 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12050 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS12055 PF13458 Periplasmic binding protein AVS55_RS12060 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVS55_RS12065 PF02566 OsmC-like protein AVS55_RS12075 PF00391 PEP-utilising enzyme, mobile domain AVS55_RS12075 PF02896 PEP-utilising enzyme, TIM barrel domain AVS55_RS12075 PF05524 PEP-utilising enzyme, N-terminal AVS55_RS12080 PF00381 PTS HPr component phosphorylation site AVS55_RS12085 PF03610 PTS system fructose IIA component AVS55_RS12090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVS55_RS12090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVS55_RS12095 PF00707 Translation initiation factor IF-3, C-terminal domain AVS55_RS12095 PF05198 Translation initiation factor IF-3, N-terminal domain AVS55_RS12100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS55_RS12100 PF02824 TGS domain AVS55_RS12100 PF03129 Anticodon binding domain AVS55_RS12100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVS55_RS12105 PF00072 Response regulator receiver domain AVS55_RS12105 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS12115 PF06969 HemN C-terminal domain AVS55_RS12120 PF00665 Integrase core domain AVS55_RS12120 PF13011 AVS55_RS12120 AVS55_RS12125 PF00990 GGDEF domain AVS55_RS12125 PF13185 GAF domain AVS55_RS12130 PF00665 Integrase core domain AVS55_RS12130 PF13011 AVS55_RS12130 AVS55_RS12135 PF12805 AVS55_RS12135 AVS55_RS12135 PF13515 AVS55_RS12135 AVS55_RS12140 PF07690 Major Facilitator Superfamily AVS55_RS12145 PF03883 AVS55_RS12145 AVS55_RS12150 PF00665 Integrase core domain AVS55_RS12150 PF13011 AVS55_RS12150 AVS55_RS12160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVS55_RS12165 PF06808 AVS55_RS12165 AVS55_RS12170 PF04290 AVS55_RS12170 AVS55_RS12175 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS12180 PF01416 tRNA pseudouridine synthase AVS55_RS12190 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVS55_RS12190 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVS55_RS12195 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS55_RS12200 PF00694 Aconitase C-terminal domain AVS55_RS12205 PF00330 Aconitase family (aconitate hydratase) AVS55_RS12210 PF12849 PBP superfamily domain AVS55_RS12215 PF00005 ABC transporter AVS55_RS12220 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS12225 PF12727 PBP superfamily domain AVS55_RS12235 PF01292 Prokaryotic cytochrome b561 AVS55_RS12250 PF00384 Molybdopterin oxidoreductase AVS55_RS12250 PF01568 Molydopterin dinucleotide binding domain AVS55_RS12250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVS55_RS12260 PF02613 Nitrate reductase delta subunit AVS55_RS12265 PF00037 4Fe-4S binding domain AVS55_RS12265 PF13187 4Fe-4S dicluster domain AVS55_RS12270 PF11748 AVS55_RS12270 AVS55_RS12275 PF11749 AVS55_RS12275 AVS55_RS12280 PF01883 Domain of unknown function DUF59 AVS55_RS12280 PF10609 ParA/MinD ATPase like AVS55_RS12285 PF12804 MobA-like NTP transferase domain AVS55_RS12290 PF00994 Probable molybdopterin binding domain AVS55_RS12290 PF03453 MoeA N-terminal region (domain I and II) AVS55_RS12290 PF03454 MoeA C-terminal region (domain IV) AVS55_RS12295 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AVS55_RS12300 PF01435 Peptidase family M48 AVS55_RS12305 PF01264 Chorismate synthase AVS55_RS12310 PF00563 EAL domain AVS55_RS12320 PF00665 Integrase core domain AVS55_RS12320 PF13011 AVS55_RS12320 AVS55_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12330 PF00005 ABC transporter AVS55_RS12330 PF08402 TOBE domain AVS55_RS12335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS12335 PF03466 LysR substrate binding domain AVS55_RS12340 PF00300 Histidine phosphatase superfamily (branch 1) AVS55_RS12350 PF02142 MGS-like domain AVS55_RS12350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS12350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVS55_RS12355 PF00117 Glutamine amidotransferase class-I AVS55_RS12355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVS55_RS12360 PF00923 Transaldolase AVS55_RS12365 PF00665 Integrase core domain AVS55_RS12365 PF13011 AVS55_RS12365 AVS55_RS12370 PF00665 Integrase core domain AVS55_RS12370 PF13011 AVS55_RS12370 AVS55_RS12375 PF01988 AVS55_RS12375 AVS55_RS12380 PF03061 Thioesterase superfamily AVS55_RS12385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS12385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS12390 PF16113 AVS55_RS12390 AVS55_RS12395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS12395 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS12395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS12400 PF03658 RnfH family Ubiquitin AVS55_RS12405 PF03364 Polyketide cyclase / dehydrase and lipid transport AVS55_RS12410 PF00665 Integrase core domain AVS55_RS12410 PF13011 AVS55_RS12410 AVS55_RS12415 PF01668 SmpB protein AVS55_RS12420 PF00990 GGDEF domain AVS55_RS12425 PF01145 SPFH domain / Band 7 family AVS55_RS12425 PF16200 AVS55_RS12425 AVS55_RS12430 PF00665 Integrase core domain AVS55_RS12430 PF13011 AVS55_RS12430 AVS55_RS12440 PF00117 Glutamine amidotransferase class-I AVS55_RS12445 PF00391 PEP-utilising enzyme, mobile domain AVS55_RS12445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVS55_RS12445 PF02896 PEP-utilising enzyme, TIM barrel domain AVS55_RS12450 PF03618 AVS55_RS12450 AVS55_RS12455 PF00588 SpoU rRNA Methylase family AVS55_RS12460 PF01351 Ribonuclease HII AVS55_RS12465 PF02684 AVS55_RS12465 AVS55_RS12470 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS12470 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVS55_RS12475 PF07977 FabA-like domain AVS55_RS12480 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS12480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVS55_RS12480 PF14602 Hexapeptide repeat of succinyl-transferase AVS55_RS12485 PF03938 Outer membrane protein (OmpH-like) AVS55_RS12490 PF01103 Surface antigen AVS55_RS12490 PF07244 Surface antigen variable number repeat AVS55_RS12495 PF02163 Peptidase family M50 AVS55_RS12500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVS55_RS12500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AVS55_RS12500 PF13288 DXP reductoisomerase C-terminal domain AVS55_RS12505 PF01148 Cytidylyltransferase family AVS55_RS12510 PF01255 Putative undecaprenyl diphosphate synthase AVS55_RS12515 PF01765 Ribosome recycling factor AVS55_RS12520 PF00696 Amino acid kinase family AVS55_RS12525 PF00889 Elongation factor TS AVS55_RS12530 PF00318 Ribosomal protein S2 AVS55_RS12535 PF00557 Metallopeptidase family M24 AVS55_RS12540 PF01909 Nucleotidyltransferase domain AVS55_RS12540 PF01966 HD domain AVS55_RS12540 PF08335 GlnD PII-uridylyltransferase AVS55_RS12545 PF01914 AVS55_RS12545 AVS55_RS12550 PF02600 Disulfide bond formation protein DsbB AVS55_RS12555 PF00156 Phosphoribosyl transferase domain AVS55_RS12555 PF13522 Glutamine amidotransferase domain AVS55_RS12560 PF02674 AVS55_RS12560 AVS55_RS12565 PF05036 Sporulation related domain AVS55_RS12570 PF08245 Mur ligase middle domain AVS55_RS12575 PF03646 FlaG protein AVS55_RS12580 PF02465 AVS55_RS12580 AVS55_RS12580 PF07195 AVS55_RS12580 AVS55_RS12580 PF07196 Flagellin hook IN motif AVS55_RS12585 PF02561 Flagellar protein FliS AVS55_RS12590 PF05400 Flagellar protein FliT AVS55_RS12600 PF02120 Flagellar hook-length control protein FliK AVS55_RS12605 PF01312 FlhB HrpN YscU SpaS Family AVS55_RS12615 PF02049 AVS55_RS12615 AVS55_RS12620 PF01514 Secretory protein of YscJ/FliF family AVS55_RS12620 PF08345 AVS55_RS12620 AVS55_RS12625 PF01706 FliG C-terminal domain AVS55_RS12625 PF14841 FliG middle domain AVS55_RS12625 PF14842 FliG N-terminal domain AVS55_RS12630 PF02108 AVS55_RS12630 AVS55_RS12635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS12640 PF02050 Flagellar FliJ protein AVS55_RS12645 PF02120 Flagellar hook-length control protein FliK AVS55_RS12650 PF00665 Integrase core domain AVS55_RS12650 PF13011 AVS55_RS12650 AVS55_RS12660 PF03748 AVS55_RS12660 AVS55_RS12665 PF01052 Surface presentation of antigens (SPOA) AVS55_RS12665 PF02154 Flagellar motor switch protein FliM AVS55_RS12670 PF01052 Surface presentation of antigens (SPOA) AVS55_RS12675 PF04347 AVS55_RS12675 AVS55_RS12680 PF00813 AVS55_RS12680 AVS55_RS12685 PF01313 AVS55_RS12685 AVS55_RS12690 PF01311 AVS55_RS12690 AVS55_RS12695 PF01548 AVS55_RS12695 AVS55_RS12695 PF02371 AVS55_RS12695 AVS55_RS12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS12700 PF00672 HAMP domain AVS55_RS12700 PF08447 PAS fold AVS55_RS12705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS12705 PF00672 HAMP domain AVS55_RS12705 PF02203 Tar ligand binding domain homologue AVS55_RS12710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS12710 PF00672 HAMP domain AVS55_RS12710 PF02203 Tar ligand binding domain homologue AVS55_RS12715 PF00669 Bacterial flagellin N-terminal helical region AVS55_RS12720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVS55_RS12725 PF10135 AVS55_RS12725 AVS55_RS12730 PF02119 AVS55_RS12730 AVS55_RS12735 PF02107 AVS55_RS12735 AVS55_RS12740 PF00460 Flagella basal body rod protein AVS55_RS12740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12745 PF00460 Flagella basal body rod protein AVS55_RS12745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12750 PF00460 Flagella basal body rod protein AVS55_RS12750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12750 PF07559 Flagellar basal body protein FlaE AVS55_RS12755 PF03963 AVS55_RS12755 AVS55_RS12755 PF13860 FlgD Ig-like domain AVS55_RS12755 PF13861 FlgD Tudor-like domain AVS55_RS12760 PF00460 Flagella basal body rod protein AVS55_RS12760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS55_RS12765 PF00460 Flagella basal body rod protein AVS55_RS12770 PF13144 SAF-like AVS55_RS12775 PF04316 Anti-sigma-28 factor, FlgM AVS55_RS12780 PF05130 FlgN protein AVS55_RS12785 PF00448 SRP54-type protein, GTPase domain AVS55_RS12795 PF01312 FlhB HrpN YscU SpaS Family AVS55_RS12800 PF01548 AVS55_RS12800 AVS55_RS12800 PF02371 AVS55_RS12800 AVS55_RS12805 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS12810 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS12815 PF00005 ABC transporter AVS55_RS12820 PF00665 Integrase core domain AVS55_RS12820 PF13011 AVS55_RS12820 AVS55_RS12825 PF02558 Ketopantoate reductase PanE/ApbA AVS55_RS12825 PF08546 Ketopantoate reductase PanE/ApbA C terminal AVS55_RS12830 PF13378 Enolase C-terminal domain-like AVS55_RS12835 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS12845 PF00694 Aconitase C-terminal domain AVS55_RS12850 PF00356 Bacterial regulatory proteins, lacI family AVS55_RS12850 PF13377 Periplasmic binding protein-like domain AVS55_RS12855 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS12860 PF02515 CoA-transferase family III AVS55_RS12865 PF00285 Citrate synthase AVS55_RS12870 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS12875 PF13380 CoA binding domain AVS55_RS12875 PF13549 ATP-grasp domain AVS55_RS12875 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS12880 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS12880 PF07729 FCD domain AVS55_RS12885 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS55_RS12890 PF03358 NADPH-dependent FMN reductase AVS55_RS12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS12895 PF03466 LysR substrate binding domain AVS55_RS12900 PF13087 AAA domain AVS55_RS12900 PF13482 RNase_H superfamily AVS55_RS12900 PF13604 AAA domain AVS55_RS12905 PF03797 Autotransporter beta-domain AVS55_RS12915 PF03551 Transcriptional regulator PadR-like family AVS55_RS12925 PF03372 Endonuclease/Exonuclease/phosphatase family AVS55_RS12930 PF13091 PLD-like domain AVS55_RS12940 PF00665 Integrase core domain AVS55_RS12940 PF13011 AVS55_RS12940 AVS55_RS12945 PF03706 AVS55_RS12945 AVS55_RS12950 PF11379 AVS55_RS12950 AVS55_RS12955 PF00326 Prolyl oligopeptidase family AVS55_RS12965 PF00665 Integrase core domain AVS55_RS12965 PF13011 AVS55_RS12965 AVS55_RS12970 PF11896 Domain of unknown function (DUF3416) AVS55_RS12975 PF00128 Alpha amylase, catalytic domain AVS55_RS12980 PF00128 Alpha amylase, catalytic domain AVS55_RS12980 PF16657 AVS55_RS12980 AVS55_RS12985 PF00128 Alpha amylase, catalytic domain AVS55_RS12985 PF02806 Alpha amylase, C-terminal all-beta domain AVS55_RS12985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS55_RS12990 PF00128 Alpha amylase, catalytic domain AVS55_RS12990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS55_RS12995 PF00128 Alpha amylase, catalytic domain AVS55_RS12995 PF11941 Domain of unknown function (DUF3459) AVS55_RS13005 PF00128 Alpha amylase, catalytic domain AVS55_RS13015 PF08543 Phosphomethylpyrimidine kinase AVS55_RS13020 PF01168 Alanine racemase, N-terminal domain AVS55_RS13025 PF00155 Aminotransferase class I and II AVS55_RS13025 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS13040 PF00582 Universal stress protein family AVS55_RS13045 PF00248 Aldo/keto reductase family AVS55_RS13055 PF01447 Thermolysin metallopeptidase, catalytic domain AVS55_RS13055 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVS55_RS13060 PF07681 AVS55_RS13060 AVS55_RS13065 PF12779 AVS55_RS13065 AVS55_RS13075 PF00665 Integrase core domain AVS55_RS13075 PF13011 AVS55_RS13075 AVS55_RS13080 PF00578 AhpC/TSA family AVS55_RS13085 PF03960 ArsC family AVS55_RS13090 PF02515 CoA-transferase family III AVS55_RS13095 PF13428 Tetratricopeptide repeat AVS55_RS13100 PF08811 AVS55_RS13100 AVS55_RS13105 PF07394 AVS55_RS13105 AVS55_RS13110 PF00255 Glutathione peroxidase AVS55_RS13115 PF00043 Glutathione S-transferase, C-terminal domain AVS55_RS13115 PF02798 Glutathione S-transferase, N-terminal domain AVS55_RS13120 PF00583 Acetyltransferase (GNAT) family AVS55_RS13130 PF11738 Protein of unknown function (DUF3298) AVS55_RS13140 PF02666 AVS55_RS13140 AVS55_RS13145 PF01070 FMN-dependent dehydrogenase AVS55_RS13150 PF03180 NLPA lipoprotein AVS55_RS13155 PF08808 AVS55_RS13155 AVS55_RS13160 PF09722 AVS55_RS13160 AVS55_RS13165 PF04241 AVS55_RS13165 AVS55_RS13175 PF00665 Integrase core domain AVS55_RS13175 PF13011 AVS55_RS13175 AVS55_RS13180 PF06821 Serine hydrolase AVS55_RS13185 PF13458 Periplasmic binding protein AVS55_RS13190 PF00005 ABC transporter AVS55_RS13190 PF08402 TOBE domain AVS55_RS13195 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS13200 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS13205 PF13416 Bacterial extracellular solute-binding protein AVS55_RS13210 PF03807 NADP oxidoreductase coenzyme F420-dependent AVS55_RS13210 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVS55_RS13215 PF02592 AVS55_RS13215 AVS55_RS13220 PF00665 Integrase core domain AVS55_RS13220 PF13011 AVS55_RS13220 AVS55_RS13225 PF13458 Periplasmic binding protein AVS55_RS13230 PF02653 AVS55_RS13230 AVS55_RS13235 PF02653 AVS55_RS13235 AVS55_RS13235 PF11862 AVS55_RS13235 AVS55_RS13240 PF00005 ABC transporter AVS55_RS13240 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS13245 PF00005 ABC transporter AVS55_RS13250 PF01177 Asp/Glu/Hydantoin racemase AVS55_RS13260 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS13265 PF00892 EamA-like transporter family AVS55_RS13270 PF00665 Integrase core domain AVS55_RS13270 PF13011 AVS55_RS13270 AVS55_RS13275 PF04235 AVS55_RS13275 AVS55_RS13280 PF00521 DNA gyrase/topoisomerase IV, subunit A AVS55_RS13280 PF03989 DNA gyrase C-terminal domain, beta-propeller AVS55_RS13285 PF14317 AVS55_RS13285 AVS55_RS13290 PF00204 DNA gyrase B AVS55_RS13290 PF00986 DNA gyrase B subunit, carboxyl terminus AVS55_RS13290 PF01751 Toprim domain AVS55_RS13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS13295 PF00085 Thioredoxin AVS55_RS13300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS55_RS13300 PF07497 Rho termination factor, RNA-binding domain AVS55_RS13300 PF07498 Rho termination factor, N-terminal domain AVS55_RS13310 PF03710 Glutamate-ammonia ligase adenylyltransferase AVS55_RS13310 PF08335 GlnD PII-uridylyltransferase AVS55_RS13315 PF02677 AVS55_RS13315 AVS55_RS13320 PF03313 AVS55_RS13320 AVS55_RS13320 PF03315 Serine dehydratase beta chain AVS55_RS13325 PF02690 AVS55_RS13325 AVS55_RS13330 PF01738 Dienelactone hydrolase family AVS55_RS13335 PF02535 AVS55_RS13335 AVS55_RS13340 PF00476 DNA polymerase family A AVS55_RS13340 PF01367 5'-3' exonuclease, C-terminal SAM fold AVS55_RS13340 PF01612 3'-5' exonuclease AVS55_RS13340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVS55_RS13345 PF03641 Possible lysine decarboxylase AVS55_RS13355 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS55_RS13355 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS55_RS13360 PF00009 Elongation factor Tu GTP binding domain AVS55_RS13360 PF00679 Elongation factor G C-terminus AVS55_RS13360 PF03144 Elongation factor Tu domain 2 AVS55_RS13365 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVS55_RS13365 PF16198 AVS55_RS13365 AVS55_RS13370 PF02033 Ribosome-binding factor A AVS55_RS13375 PF00009 Elongation factor Tu GTP binding domain AVS55_RS13375 PF04760 Translation initiation factor IF-2, N-terminal region AVS55_RS13375 PF08364 AVS55_RS13375 AVS55_RS13375 PF11987 Translation-initiation factor 2 AVS55_RS13380 PF00575 S1 RNA binding domain AVS55_RS13380 PF08529 NusA N-terminal domain AVS55_RS13380 PF13184 NusA-like KH domain AVS55_RS13380 PF14520 Helix-hairpin-helix domain AVS55_RS13385 PF02576 Uncharacterised BCR, YhbC family COG0779 AVS55_RS13390 PF00849 RNA pseudouridylate synthase AVS55_RS13390 PF01479 S4 domain AVS55_RS13395 PF04079 Putative transcriptional regulators (Ypuh-like) AVS55_RS13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13405 PF03466 LysR substrate binding domain AVS55_RS13410 PF00881 Nitroreductase family AVS55_RS13415 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS55_RS13415 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVS55_RS13435 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS13435 PF14497 Glutathione S-transferase, C-terminal domain AVS55_RS13440 PF02401 LytB protein AVS55_RS13445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVS55_RS13450 PF04002 RadC-like JAB domain AVS55_RS13455 PF04199 Putative cyclase AVS55_RS13460 PF03301 Tryptophan 2,3-dioxygenase AVS55_RS13465 PF01197 Ribosomal protein L31 AVS55_RS13475 PF01554 MatE AVS55_RS13485 PF01925 AVS55_RS13485 AVS55_RS13490 PF13481 AAA domain AVS55_RS13495 PF00092 von Willebrand factor type A domain AVS55_RS13495 PF12034 AVS55_RS13495 AVS55_RS13495 PF12450 AVS55_RS13495 AVS55_RS13500 PF04542 Sigma-70 region 2 AVS55_RS13500 PF08281 Sigma-70, region 4 AVS55_RS13505 PF00665 Integrase core domain AVS55_RS13505 PF13011 AVS55_RS13505 AVS55_RS13515 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS13520 PF00842 Alanine racemase, C-terminal domain AVS55_RS13520 PF01168 Alanine racemase, N-terminal domain AVS55_RS13525 PF00494 Squalene/phytoene synthase AVS55_RS13530 PF00494 Squalene/phytoene synthase AVS55_RS13535 PF01593 Flavin containing amine oxidoreductase AVS55_RS13540 PF02537 AVS55_RS13540 AVS55_RS13545 PF03729 AVS55_RS13545 AVS55_RS13550 PF01061 AVS55_RS13550 AVS55_RS13555 PF00005 ABC transporter AVS55_RS13560 PF16357 AVS55_RS13560 AVS55_RS13565 PF10029 AVS55_RS13565 AVS55_RS13570 PF10670 AVS55_RS13570 AVS55_RS13575 PF02424 ApbE family AVS55_RS13580 PF00175 Oxidoreductase NAD-binding domain AVS55_RS13580 PF00258 Flavodoxin AVS55_RS13585 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS13590 PF07969 Amidohydrolase family AVS55_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13595 PF03466 LysR substrate binding domain AVS55_RS13600 PF10604 Polyketide cyclase / dehydrase and lipid transport AVS55_RS13605 PF09370 TIM-barrel signal transduction protein AVS55_RS13610 PF06792 Uncharacterised protein family (UPF0261) AVS55_RS13615 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS13620 PF03797 Autotransporter beta-domain AVS55_RS13625 PF03797 Autotransporter beta-domain AVS55_RS13630 PF00665 Integrase core domain AVS55_RS13630 PF13011 AVS55_RS13630 AVS55_RS13640 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS13640 PF02861 Clp amino terminal domain AVS55_RS13640 PF07724 AAA domain (Cdc48 subfamily) AVS55_RS13640 PF10431 C-terminal, D2-small domain, of ClpB protein AVS55_RS13645 PF00027 Cyclic nucleotide-binding domain AVS55_RS13645 PF13545 Crp-like helix-turn-helix domain AVS55_RS13655 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS13660 PF00293 NUDIX domain AVS55_RS13665 PF12843 AVS55_RS13665 AVS55_RS13675 PF04542 Sigma-70 region 2 AVS55_RS13675 PF08281 Sigma-70, region 4 AVS55_RS13675 PF12680 SnoaL-like domain AVS55_RS13680 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS13685 PF04170 NlpE N-terminal domain AVS55_RS13690 PF09791 AVS55_RS13690 AVS55_RS13705 PF03737 Demethylmenaquinone methyltransferase AVS55_RS13710 PF00155 Aminotransferase class I and II AVS55_RS13715 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS13725 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS13730 PF00005 ABC transporter AVS55_RS13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13735 PF03466 LysR substrate binding domain AVS55_RS13740 PF00892 EamA-like transporter family AVS55_RS13745 PF00665 Integrase core domain AVS55_RS13745 PF13011 AVS55_RS13745 AVS55_RS13750 PF00665 Integrase core domain AVS55_RS13750 PF13011 AVS55_RS13750 AVS55_RS13755 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS55_RS13760 PF04076 Bacterial OB fold (BOF) protein AVS55_RS13775 PF06684 Amino acid synthesis AVS55_RS13780 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS13785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS13785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS55_RS13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13790 PF03466 LysR substrate binding domain AVS55_RS13795 PF00596 Class II Aldolase and Adducin N-terminal domain AVS55_RS13800 PF02016 LD-carboxypeptidase AVS55_RS13810 PF00474 Sodium:solute symporter family AVS55_RS13815 PF07690 Major Facilitator Superfamily AVS55_RS13820 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13825 PF03466 LysR substrate binding domain AVS55_RS13830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVS55_RS13830 PF13378 Enolase C-terminal domain-like AVS55_RS13835 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS13840 PF04909 Amidohydrolase AVS55_RS13845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS55_RS13850 PF00665 Integrase core domain AVS55_RS13850 PF13011 AVS55_RS13850 AVS55_RS13855 PF02567 Phenazine biosynthesis-like protein AVS55_RS13860 PF12801 AVS55_RS13860 AVS55_RS13865 PF03239 AVS55_RS13865 AVS55_RS13870 PF13473 Cupredoxin-like domain AVS55_RS13875 PF10634 Fe2+ transport protein AVS55_RS13880 PF05233 AVS55_RS13880 AVS55_RS13880 PF07879 AVS55_RS13880 AVS55_RS13885 PF00106 short chain dehydrogenase AVS55_RS13890 PF07167 AVS55_RS13890 AVS55_RS13895 PF02578 Multi-copper polyphenol oxidoreductase laccase AVS55_RS13900 PF00849 RNA pseudouridylate synthase AVS55_RS13900 PF01479 S4 domain AVS55_RS13905 PF13525 Outer membrane lipoprotein AVS55_RS13910 PF06733 DEAD_2 AVS55_RS13910 PF13307 Helicase C-terminal domain AVS55_RS13915 PF00575 S1 RNA binding domain AVS55_RS13915 PF09371 Tex-like protein N-terminal domain AVS55_RS13915 PF12836 Helix-hairpin-helix motif AVS55_RS13915 PF16921 AVS55_RS13915 AVS55_RS13920 PF00579 tRNA synthetases class I (W and Y) AVS55_RS13925 PF13011 AVS55_RS13925 AVS55_RS13930 PF13011 AVS55_RS13930 AVS55_RS13935 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS55_RS13940 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS13945 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS13950 PF00665 Integrase core domain AVS55_RS13950 PF13011 AVS55_RS13950 AVS55_RS13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS13955 PF03466 LysR substrate binding domain AVS55_RS13960 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS13965 PF03969 AFG1-like ATPase AVS55_RS13970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS13970 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS13975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS55_RS13975 PF00364 Biotin-requiring enzyme AVS55_RS13975 PF02817 e3 binding domain AVS55_RS13980 PF00676 Dehydrogenase E1 component AVS55_RS13980 PF02779 Transketolase, pyrimidine binding domain AVS55_RS13980 PF16078 AVS55_RS13980 AVS55_RS13980 PF16870 AVS55_RS13980 AVS55_RS13990 PF01037 AsnC family AVS55_RS13990 PF13412 Winged helix-turn-helix DNA-binding AVS55_RS13995 PF00456 Transketolase, thiamine diphosphate binding domain AVS55_RS14000 PF00390 Malic enzyme, N-terminal domain AVS55_RS14000 PF01515 Phosphate acetyl/butaryl transferase AVS55_RS14000 PF03949 Malic enzyme, NAD binding domain AVS55_RS14005 PF16970 AVS55_RS14005 AVS55_RS14010 PF00665 Integrase core domain AVS55_RS14010 PF13011 AVS55_RS14010 AVS55_RS14015 PF01272 Transcription elongation factor, GreA/GreB, C-term AVS55_RS14015 PF03449 Transcription elongation factor, N-terminal AVS55_RS14020 PF02811 PHP domain AVS55_RS14025 PF12697 Alpha/beta hydrolase family AVS55_RS14030 PF12706 Beta-lactamase superfamily domain AVS55_RS14035 PF00665 Integrase core domain AVS55_RS14035 PF13011 AVS55_RS14035 AVS55_RS14040 PF03772 AVS55_RS14040 AVS55_RS14040 PF13567 AVS55_RS14040 AVS55_RS14045 PF11924 Protein of unknown function (DUF3442) AVS55_RS14045 PF13018 AVS55_RS14045 AVS55_RS14055 PF03797 Autotransporter beta-domain AVS55_RS14060 PF01026 TatD related DNase AVS55_RS14065 PF00005 ABC transporter AVS55_RS14070 PF02687 AVS55_RS14070 AVS55_RS14070 PF12704 MacB-like periplasmic core domain AVS55_RS14080 PF01368 DHH family AVS55_RS14080 PF02272 DHHA1 domain AVS55_RS14090 PF00106 short chain dehydrogenase AVS55_RS14095 PF00152 tRNA synthetases class II (D, K and N) AVS55_RS14095 PF01336 OB-fold nucleic acid binding domain AVS55_RS14105 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS14110 PF00501 AMP-binding enzyme AVS55_RS14115 PF00005 ABC transporter AVS55_RS14120 PF13458 Periplasmic binding protein AVS55_RS14125 PF02653 AVS55_RS14125 AVS55_RS14130 PF02653 AVS55_RS14130 AVS55_RS14135 PF00005 ABC transporter AVS55_RS14135 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS14140 PF00665 Integrase core domain AVS55_RS14140 PF13011 AVS55_RS14140 AVS55_RS14145 PF00563 EAL domain AVS55_RS14145 PF00990 GGDEF domain AVS55_RS14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS14150 PF00072 Response regulator receiver domain AVS55_RS14150 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS14155 PF02696 AVS55_RS14155 AVS55_RS14160 PF09842 AVS55_RS14160 AVS55_RS14165 PF03631 AVS55_RS14165 AVS55_RS14170 PF00571 CBS domain AVS55_RS14175 PF00665 Integrase core domain AVS55_RS14175 PF13011 AVS55_RS14175 AVS55_RS14180 PF01207 Dihydrouridine synthase (Dus) AVS55_RS14185 PF01636 Phosphotransferase enzyme family AVS55_RS14195 PF02643 Uncharacterized ACR, COG1430 AVS55_RS14200 PF00482 Type II secretion system (T2SS), protein F AVS55_RS14205 PF00665 Integrase core domain AVS55_RS14205 PF13011 AVS55_RS14205 AVS55_RS14210 PF01985 CRS1 / YhbY (CRM) domain AVS55_RS14215 PF01728 FtsJ-like methyltransferase AVS55_RS14220 PF00004 ATPase family associated with various cellular activities (AAA) AVS55_RS14220 PF01434 Peptidase family M41 AVS55_RS14220 PF06480 FtsH Extracellular AVS55_RS14225 PF00809 Pterin binding enzyme AVS55_RS14230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS55_RS14230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS55_RS14230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS55_RS14230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS55_RS14235 PF13444 Acetyltransferase (GNAT) domain AVS55_RS14240 PF02541 Ppx/GppA phosphatase family AVS55_RS14245 PF02503 Polyphosphate kinase middle domain AVS55_RS14245 PF13089 Polyphosphate kinase N-terminal domain AVS55_RS14245 PF13090 Polyphosphate kinase C-terminal domain AVS55_RS14250 PF12849 PBP superfamily domain AVS55_RS14255 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS14260 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS14265 PF00005 ABC transporter AVS55_RS14275 PF00665 Integrase core domain AVS55_RS14275 PF13011 AVS55_RS14275 AVS55_RS14280 PF01337 Barstar (barnase inhibitor) AVS55_RS14290 PF00390 Malic enzyme, N-terminal domain AVS55_RS14290 PF01515 Phosphate acetyl/butaryl transferase AVS55_RS14290 PF03949 Malic enzyme, NAD binding domain AVS55_RS14300 PF00155 Aminotransferase class I and II AVS55_RS14305 PF01464 Transglycosylase SLT domain AVS55_RS14310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVS55_RS14320 PF07332 AVS55_RS14320 AVS55_RS14325 PF05957 AVS55_RS14325 AVS55_RS14335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS55_RS14335 PF10414 Sirohaem synthase dimerisation region AVS55_RS14335 PF13241 Putative NAD(P)-binding AVS55_RS14335 PF14824 Sirohaem biosynthesis protein central AVS55_RS14340 PF03212 Pertactin AVS55_RS14340 PF03797 Autotransporter beta-domain AVS55_RS14345 PF01548 AVS55_RS14345 AVS55_RS14345 PF02371 AVS55_RS14345 AVS55_RS14350 PF14681 Uracil phosphoribosyltransferase AVS55_RS14355 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AVS55_RS14360 PF02547 Queuosine biosynthesis protein AVS55_RS14365 PF01702 Queuine tRNA-ribosyltransferase AVS55_RS14370 PF02699 Preprotein translocase subunit AVS55_RS14375 PF02355 Protein export membrane protein AVS55_RS14375 PF07549 SecD/SecF GG Motif AVS55_RS14375 PF13721 SecD export protein N-terminal TM region AVS55_RS14380 PF02355 Protein export membrane protein AVS55_RS14380 PF07549 SecD/SecF GG Motif AVS55_RS14385 PF01548 AVS55_RS14385 AVS55_RS14385 PF02371 AVS55_RS14385 AVS55_RS14395 PF00919 Uncharacterized protein family UPF0004 AVS55_RS14395 PF01938 TRAM domain AVS55_RS14395 PF04055 Radical SAM superfamily AVS55_RS14400 PF02562 PhoH-like protein AVS55_RS14405 PF02130 Uncharacterized protein family UPF0054 AVS55_RS14410 PF00571 CBS domain AVS55_RS14410 PF03471 Transporter associated domain AVS55_RS14415 PF00795 Carbon-nitrogen hydrolase AVS55_RS14420 PF00248 Aldo/keto reductase family AVS55_RS14440 PF01548 AVS55_RS14440 AVS55_RS14440 PF02371 AVS55_RS14440 AVS55_RS14445 PF04344 Chemotaxis phosphatase, CheZ AVS55_RS14450 PF00072 Response regulator receiver domain AVS55_RS14455 PF00072 Response regulator receiver domain AVS55_RS14455 PF01339 CheB methylesterase AVS55_RS14465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS55_RS14465 PF00672 HAMP domain AVS55_RS14465 PF02203 Tar ligand binding domain homologue AVS55_RS14470 PF01584 CheW-like domain AVS55_RS14475 PF01584 CheW-like domain AVS55_RS14475 PF01627 Hpt domain AVS55_RS14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS14475 PF02895 Signal transducing histidine kinase, homodimeric domain AVS55_RS14475 PF09078 CheY binding AVS55_RS14480 PF00072 Response regulator receiver domain AVS55_RS14485 PF00691 OmpA family AVS55_RS14485 PF13677 AVS55_RS14485 AVS55_RS14490 PF01618 AVS55_RS14490 AVS55_RS14495 PF05280 Flagellar transcriptional activator (FlhC) AVS55_RS14500 PF05247 Flagellar transcriptional activator (FlhD) AVS55_RS14505 PF04539 Sigma-70 region 3 AVS55_RS14505 PF04542 Sigma-70 region 2 AVS55_RS14505 PF04545 Sigma-70, region 4 AVS55_RS14510 PF00665 Integrase core domain AVS55_RS14510 PF13011 AVS55_RS14510 AVS55_RS14515 PF01176 Translation initiation factor 1A / IF-1 AVS55_RS14525 PF01551 Peptidase family M23 AVS55_RS14535 PF00994 Probable molybdopterin binding domain AVS55_RS14545 PF03591 AVS55_RS14545 AVS55_RS14545 PF05437 AVS55_RS14545 AVS55_RS14550 PF13591 MerR HTH family regulatory protein AVS55_RS14555 PF00226 DnaJ domain AVS55_RS14555 PF01556 DnaJ C terminal domain AVS55_RS14560 PF00583 Acetyltransferase (GNAT) family AVS55_RS14565 PF05163 DinB family AVS55_RS14575 PF00665 Integrase core domain AVS55_RS14575 PF13011 AVS55_RS14575 AVS55_RS14580 PF02798 Glutathione S-transferase, N-terminal domain AVS55_RS14580 PF14834 Glutathione S-transferase, C-terminal domain AVS55_RS14585 PF11339 AVS55_RS14585 AVS55_RS14590 PF01515 Phosphate acetyl/butaryl transferase AVS55_RS14595 PF00871 Acetokinase family AVS55_RS14600 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS14605 PF00162 Phosphoglycerate kinase AVS55_RS14610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVS55_RS14610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVS55_RS14615 PF00456 Transketolase, thiamine diphosphate binding domain AVS55_RS14615 PF02779 Transketolase, pyrimidine binding domain AVS55_RS14615 PF02780 Transketolase, C-terminal domain AVS55_RS14620 PF04452 RNA methyltransferase AVS55_RS14625 PF00665 Integrase core domain AVS55_RS14625 PF13011 AVS55_RS14625 AVS55_RS14630 PF00669 Bacterial flagellin N-terminal helical region AVS55_RS14630 PF00700 Bacterial flagellin C-terminal helical region AVS55_RS14635 PF00364 Biotin-requiring enzyme AVS55_RS14635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS14635 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS14640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS55_RS14640 PF00364 Biotin-requiring enzyme AVS55_RS14640 PF02817 e3 binding domain AVS55_RS14645 PF00456 Transketolase, thiamine diphosphate binding domain AVS55_RS14650 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS14650 PF08448 PAS fold AVS55_RS14650 PF13188 PAS domain AVS55_RS14655 PF00072 Response regulator receiver domain AVS55_RS14655 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS14660 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVS55_RS14660 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVS55_RS14665 PF01432 Peptidase family M3 AVS55_RS14670 PF02630 SCO1/SenC AVS55_RS14675 PF04226 AVS55_RS14675 AVS55_RS14680 PF02321 Outer membrane efflux protein AVS55_RS14685 PF00873 AcrB/AcrD/AcrF family AVS55_RS14690 PF13533 Biotin-lipoyl like AVS55_RS14695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS14695 PF03466 LysR substrate binding domain AVS55_RS14700 PF00849 RNA pseudouridylate synthase AVS55_RS14700 PF01479 S4 domain AVS55_RS14705 PF04345 Chorismate lyase AVS55_RS14710 PF07690 Major Facilitator Superfamily AVS55_RS14715 PF01548 AVS55_RS14715 AVS55_RS14715 PF02371 AVS55_RS14715 AVS55_RS14720 PF00248 Aldo/keto reductase family AVS55_RS14725 PF00665 Integrase core domain AVS55_RS14725 PF13011 AVS55_RS14725 AVS55_RS14730 PF00293 NUDIX domain AVS55_RS14735 PF01245 Ribosomal protein L19 AVS55_RS14740 PF00892 EamA-like transporter family AVS55_RS14750 PF04055 Radical SAM superfamily AVS55_RS14760 PF01507 Phosphoadenosine phosphosulfate reductase family AVS55_RS14765 PF00005 ABC transporter AVS55_RS14765 PF12857 AVS55_RS14765 AVS55_RS14770 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS14775 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS14785 PF13531 Bacterial extracellular solute-binding protein AVS55_RS14790 PF00578 AhpC/TSA family AVS55_RS14790 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVS55_RS14795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS14795 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS14795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS14795 PF12418 AVS55_RS14795 AVS55_RS14795 PF12806 AVS55_RS14795 AVS55_RS14800 PF00766 Electron transfer flavoprotein FAD-binding domain AVS55_RS14800 PF01012 Electron transfer flavoprotein domain AVS55_RS14805 PF01012 Electron transfer flavoprotein domain AVS55_RS14810 PF00850 Histone deacetylase domain AVS55_RS14815 PF13406 Transglycosylase SLT domain AVS55_RS14820 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS14825 PF00665 Integrase core domain AVS55_RS14825 PF13011 AVS55_RS14825 AVS55_RS14830 PF12836 Helix-hairpin-helix motif AVS55_RS14835 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS14840 PF00294 pfkB family carbohydrate kinase AVS55_RS14850 PF06305 AVS55_RS14850 AVS55_RS14855 PF00216 Bacterial DNA-binding protein AVS55_RS14860 PF00575 S1 RNA binding domain AVS55_RS14865 PF02224 Cytidylate kinase AVS55_RS14870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVS55_RS14875 PF02153 Prephenate dehydrogenase AVS55_RS14880 PF00800 Prephenate dehydratase AVS55_RS14880 PF01817 Chorismate mutase type II AVS55_RS14880 PF01842 ACT domain AVS55_RS14885 PF00266 Aminotransferase class-V AVS55_RS14890 PF00521 DNA gyrase/topoisomerase IV, subunit A AVS55_RS14890 PF03989 DNA gyrase C-terminal domain, beta-propeller AVS55_RS14895 PF00691 OmpA family AVS55_RS14900 PF13489 Methyltransferase domain AVS55_RS14905 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS14910 PF07690 Major Facilitator Superfamily AVS55_RS14920 PF07927 YcfA-like protein AVS55_RS14925 PF00665 Integrase core domain AVS55_RS14925 PF13011 AVS55_RS14925 AVS55_RS14930 PF15919 AVS55_RS14930 AVS55_RS14935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS14935 PF03466 LysR substrate binding domain AVS55_RS14940 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS14945 PF00665 Integrase core domain AVS55_RS14945 PF13011 AVS55_RS14945 AVS55_RS14950 PF00817 impB/mucB/samB family AVS55_RS14950 PF11798 IMS family HHH motif AVS55_RS14950 PF11799 impB/mucB/samB family C-terminal domain AVS55_RS14955 PF03061 Thioesterase superfamily AVS55_RS14965 PF00326 Prolyl oligopeptidase family AVS55_RS14970 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS14970 PF00912 Transglycosylase AVS55_RS14970 PF17092 AVS55_RS14970 AVS55_RS14975 PF00149 Calcineurin-like phosphoesterase AVS55_RS14980 PF03929 AVS55_RS14980 AVS55_RS14990 PF00248 Aldo/keto reductase family AVS55_RS14995 PF00248 Aldo/keto reductase family AVS55_RS15000 PF00005 ABC transporter AVS55_RS15000 PF00664 ABC transporter transmembrane region AVS55_RS15005 PF00355 Rieske [2Fe-2S] domain AVS55_RS15010 PF00665 Integrase core domain AVS55_RS15010 PF13011 AVS55_RS15010 AVS55_RS15025 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) AVS55_RS15040 PF00665 Integrase core domain AVS55_RS15040 PF13011 AVS55_RS15040 AVS55_RS15045 PF01039 Carboxyl transferase domain AVS55_RS15050 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AVS55_RS15050 PF02785 Biotin carboxylase C-terminal domain AVS55_RS15050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS15055 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS15055 PF07702 UTRA domain AVS55_RS15060 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS15065 PF04909 Amidohydrolase AVS55_RS15075 PF00682 HMGL-like AVS55_RS15075 PF02436 Conserved carboxylase domain AVS55_RS15080 PF00364 Biotin-requiring enzyme AVS55_RS15085 PF03972 MmgE/PrpD family AVS55_RS15090 PF13487 HD domain AVS55_RS15105 PF02253 Phospholipase A1 AVS55_RS15110 PF07238 PilZ domain AVS55_RS15110 PF07317 Flagellar regulator YcgR AVS55_RS15115 PF11769 AVS55_RS15115 AVS55_RS15130 PF05724 Thiopurine S-methyltransferase (TPMT) AVS55_RS15135 PF00005 ABC transporter AVS55_RS15135 PF00664 ABC transporter transmembrane region AVS55_RS15140 PF00665 Integrase core domain AVS55_RS15140 PF13011 AVS55_RS15140 AVS55_RS15145 PF12805 AVS55_RS15145 AVS55_RS15150 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS15150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS15150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS15155 PF10369 Small subunit of acetolactate synthase AVS55_RS15155 PF13710 ACT domain AVS55_RS15160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVS55_RS15160 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AVS55_RS15165 PF01066 CDP-alcohol phosphatidyltransferase AVS55_RS15180 PF00312 Ribosomal protein S15 AVS55_RS15185 PF00013 KH domain AVS55_RS15185 PF00575 S1 RNA binding domain AVS55_RS15185 PF01138 3' exoribonuclease family, domain 1 AVS55_RS15185 PF03725 3' exoribonuclease family, domain 2 AVS55_RS15185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVS55_RS15195 PF00665 Integrase core domain AVS55_RS15195 PF13011 AVS55_RS15195 AVS55_RS15200 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS15205 PF13470 AVS55_RS15205 AVS55_RS15215 PF00107 Zinc-binding dehydrogenase AVS55_RS15215 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS15220 PF00121 Triosephosphate isomerase AVS55_RS15225 PF03840 Preprotein translocase SecG subunit AVS55_RS15235 PF02028 BCCT family transporter AVS55_RS15240 PF01614 Bacterial transcriptional regulator AVS55_RS15240 PF09339 IclR helix-turn-helix domain AVS55_RS15245 PF05034 Methylaspartate ammonia-lyase N-terminus AVS55_RS15245 PF07476 Methylaspartate ammonia-lyase C-terminus AVS55_RS15250 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15255 PF03972 MmgE/PrpD family AVS55_RS15265 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15270 PF01548 AVS55_RS15270 AVS55_RS15270 PF02371 AVS55_RS15270 AVS55_RS15275 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15280 PF03466 LysR substrate binding domain AVS55_RS15285 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS55_RS15290 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS55_RS15295 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15300 PF00581 Rhodanese-like domain AVS55_RS15305 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15310 PF01266 FAD dependent oxidoreductase AVS55_RS15315 PF02538 AVS55_RS15315 AVS55_RS15320 PF01968 Hydantoinase/oxoprolinase AVS55_RS15320 PF05378 AVS55_RS15320 AVS55_RS15325 PF09339 IclR helix-turn-helix domain AVS55_RS15330 PF00127 Copper binding proteins, plastocyanin/azurin family AVS55_RS15335 PF03551 Transcriptional regulator PadR-like family AVS55_RS15340 PF02321 Outer membrane efflux protein AVS55_RS15345 PF00873 AcrB/AcrD/AcrF family AVS55_RS15350 PF16576 AVS55_RS15350 AVS55_RS15355 PF01638 HxlR-like helix-turn-helix AVS55_RS15355 PF14864 Alkyl sulfatase C-terminal AVS55_RS15360 PF00665 Integrase core domain AVS55_RS15360 PF13011 AVS55_RS15360 AVS55_RS15365 PF02028 BCCT family transporter AVS55_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15370 PF03466 LysR substrate binding domain AVS55_RS15375 PF00781 Diacylglycerol kinase catalytic domain AVS55_RS15380 PF00149 Calcineurin-like phosphoesterase AVS55_RS15385 PF01569 PAP2 superfamily AVS55_RS15390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS55_RS15395 PF03061 Thioesterase superfamily AVS55_RS15400 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS15405 PF00665 Integrase core domain AVS55_RS15405 PF13011 AVS55_RS15405 AVS55_RS15415 PF13609 Gram-negative porin AVS55_RS15420 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVS55_RS15425 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVS55_RS15430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVS55_RS15435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVS55_RS15440 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AVS55_RS15445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVS55_RS15445 PF10531 SLBB domain AVS55_RS15445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVS55_RS15450 PF00384 Molybdopterin oxidoreductase AVS55_RS15450 PF01568 Molydopterin dinucleotide binding domain AVS55_RS15450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVS55_RS15450 PF13510 2Fe-2S iron-sulfur cluster binding domain AVS55_RS15455 PF00146 NADH dehydrogenase AVS55_RS15460 PF12838 4Fe-4S dicluster domain AVS55_RS15465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVS55_RS15470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVS55_RS15475 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AVS55_RS15475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVS55_RS15480 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AVS55_RS15485 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AVS55_RS15490 PF10993 AVS55_RS15490 AVS55_RS15495 PF00593 TonB dependent receptor AVS55_RS15495 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS15500 PF00593 TonB dependent receptor AVS55_RS15500 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS15505 PF13302 Acetyltransferase (GNAT) domain AVS55_RS15510 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS15515 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS15515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS15515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS15520 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15525 PF03466 LysR substrate binding domain AVS55_RS15530 PF12710 haloacid dehalogenase-like hydrolase AVS55_RS15530 PF13284 AVS55_RS15530 AVS55_RS15535 PF00270 DEAD/DEAH box helicase AVS55_RS15535 PF00271 Helicase conserved C-terminal domain AVS55_RS15535 PF02559 CarD-like/TRCF domain AVS55_RS15535 PF03461 TRCF domain AVS55_RS15540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVS55_RS15545 PF02542 YgbB family AVS55_RS15550 PF00665 Integrase core domain AVS55_RS15550 PF13011 AVS55_RS15550 AVS55_RS15555 PF00316 Fructose-1-6-bisphosphatase AVS55_RS15560 PF01433 Peptidase family M1 AVS55_RS15560 PF11940 Domain of unknown function (DUF3458) AVS55_RS15565 PF13590 Domain of unknown function (DUF4136) AVS55_RS15570 PF00665 Integrase core domain AVS55_RS15570 PF13011 AVS55_RS15570 AVS55_RS15575 PF00924 Mechanosensitive ion channel AVS55_RS15580 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS15580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS15580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS15585 PF13468 Glyoxalase-like domain AVS55_RS15590 PF09084 NMT1/THI5 like AVS55_RS15595 PF00005 ABC transporter AVS55_RS15600 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15605 PF10994 Protein of unknown function (DUF2817) AVS55_RS15610 PF00501 AMP-binding enzyme AVS55_RS15610 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS15615 PF00107 Zinc-binding dehydrogenase AVS55_RS15615 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS15620 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS15620 PF07729 FCD domain AVS55_RS15625 PF03797 Autotransporter beta-domain AVS55_RS15630 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS15630 PF07729 FCD domain AVS55_RS15635 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS15635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS15635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS15640 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS15645 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15655 PF01063 Aminotransferase class IV AVS55_RS15660 PF00005 ABC transporter AVS55_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15670 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15675 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15680 PF03466 LysR substrate binding domain AVS55_RS15685 PF02321 Outer membrane efflux protein AVS55_RS15690 PF13437 HlyD family secretion protein AVS55_RS15690 PF13533 Biotin-lipoyl like AVS55_RS15695 PF00005 ABC transporter AVS55_RS15695 PF00664 ABC transporter transmembrane region AVS55_RS15695 PF03412 Peptidase C39 family AVS55_RS15700 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AVS55_RS15700 PF02382 AVS55_RS15700 AVS55_RS15700 PF03497 Anthrax toxin LF subunit AVS55_RS15710 PF02794 AVS55_RS15710 AVS55_RS15715 PF00171 Aldehyde dehydrogenase family AVS55_RS15720 PF00665 Integrase core domain AVS55_RS15720 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15720 PF13011 AVS55_RS15720 AVS55_RS15725 PF01266 FAD dependent oxidoreductase AVS55_RS15730 PF02538 AVS55_RS15730 AVS55_RS15735 PF01968 Hydantoinase/oxoprolinase AVS55_RS15735 PF05378 AVS55_RS15735 AVS55_RS15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS15740 PF03466 LysR substrate binding domain AVS55_RS15750 PF00348 Polyprenyl synthetase AVS55_RS15755 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS55_RS15760 PF00829 Ribosomal prokaryotic L21 protein AVS55_RS15765 PF01016 Ribosomal L27 protein AVS55_RS15770 PF01018 GTP1/OBG AVS55_RS15770 PF01926 50S ribosome-binding GTPase AVS55_RS15775 PF00696 Amino acid kinase family AVS55_RS15775 PF01472 PUA domain AVS55_RS15785 PF01381 Helix-turn-helix AVS55_RS15790 PF00665 Integrase core domain AVS55_RS15790 PF13011 AVS55_RS15790 AVS55_RS15800 PF01381 Helix-turn-helix AVS55_RS15805 PF06634 AVS55_RS15805 AVS55_RS15810 PF00665 Integrase core domain AVS55_RS15810 PF13011 AVS55_RS15810 AVS55_RS15815 PF04542 Sigma-70 region 2 AVS55_RS15815 PF08281 Sigma-70, region 4 AVS55_RS15820 PF04773 FecR protein AVS55_RS15820 PF16220 AVS55_RS15820 AVS55_RS15825 PF00593 TonB dependent receptor AVS55_RS15825 PF07660 Secretin and TonB N terminus short domain AVS55_RS15825 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS15830 PF04264 YceI-like domain AVS55_RS15835 PF00665 Integrase core domain AVS55_RS15835 PF13011 AVS55_RS15835 AVS55_RS15840 PF03435 Saccharopine dehydrogenase AVS55_RS15840 PF16653 AVS55_RS15840 AVS55_RS15845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVS55_RS15850 PF00665 Integrase core domain AVS55_RS15850 PF13011 AVS55_RS15850 AVS55_RS15860 PF01614 Bacterial transcriptional regulator AVS55_RS15860 PF09339 IclR helix-turn-helix domain AVS55_RS15865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15875 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS15880 PF00005 ABC transporter AVS55_RS15880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS15885 PF01425 Amidase AVS55_RS15890 PF00202 Aminotransferase class-III AVS55_RS15895 PF06348 AVS55_RS15895 AVS55_RS15900 PF13714 Phosphoenolpyruvate phosphomutase AVS55_RS15905 PF00665 Integrase core domain AVS55_RS15905 PF13011 AVS55_RS15905 AVS55_RS15910 PF00691 OmpA family AVS55_RS15915 PF01329 Pterin 4 alpha carbinolamine dehydratase AVS55_RS15925 PF00483 Nucleotidyl transferase AVS55_RS15930 PF01636 Phosphotransferase enzyme family AVS55_RS15935 PF04453 Organic solvent tolerance protein AVS55_RS15940 PF00639 PPIC-type PPIASE domain AVS55_RS15940 PF09312 SurA N-terminal domain AVS55_RS15940 PF13616 PPIC-type PPIASE domain AVS55_RS15945 PF00398 Ribosomal RNA adenine dimethylase AVS55_RS15950 PF02595 Glycerate kinase family AVS55_RS15955 PF00224 Pyruvate kinase, barrel domain AVS55_RS15955 PF02887 Pyruvate kinase, alpha/beta domain AVS55_RS15960 PF07670 Nucleoside recognition AVS55_RS15965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS15965 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS15965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS15965 PF09317 AVS55_RS15965 AVS55_RS15970 PF00665 Integrase core domain AVS55_RS15970 PF13011 AVS55_RS15970 AVS55_RS15980 PF01019 Gamma-glutamyltranspeptidase AVS55_RS15985 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15990 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS15995 PF00005 ABC transporter AVS55_RS16000 PF01032 FecCD transport family AVS55_RS16005 PF13174 Tetratricopeptide repeat AVS55_RS16005 PF13432 Tetratricopeptide repeat AVS55_RS16010 PF00691 OmpA family AVS55_RS16015 PF04052 TolB amino-terminal domain AVS55_RS16015 PF07676 WD40-like Beta Propeller Repeat AVS55_RS16020 PF13103 TonB C terminal AVS55_RS16025 PF02472 Biopolymer transport protein ExbD/TolR AVS55_RS16030 PF01618 AVS55_RS16030 AVS55_RS16035 PF03061 Thioesterase superfamily AVS55_RS16040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS55_RS16040 PF03129 Anticodon binding domain AVS55_RS16040 PF04073 Aminoacyl-tRNA editing domain AVS55_RS16045 PF00293 NUDIX domain AVS55_RS16050 PF00072 Response regulator receiver domain AVS55_RS16050 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS16055 PF08521 AVS55_RS16055 AVS55_RS16060 PF02586 Uncharacterised ACR, COG2135 AVS55_RS16080 PF10721 AVS55_RS16080 AVS55_RS16090 PF16082 AVS55_RS16090 AVS55_RS16110 PF09327 AVS55_RS16110 AVS55_RS16110 PF13550 AVS55_RS16110 AVS55_RS16115 PF00877 NlpC/P60 family AVS55_RS16120 PF08875 AVS55_RS16120 AVS55_RS16130 PF06791 AVS55_RS16130 AVS55_RS16130 PF09718 AVS55_RS16130 AVS55_RS16135 PF08809 AVS55_RS16135 AVS55_RS16140 PF08748 AVS55_RS16140 AVS55_RS16145 PF08813 AVS55_RS16145 AVS55_RS16150 PF13392 HNH endonuclease AVS55_RS16155 PF13554 Bacteriophage related domain of unknown function AVS55_RS16190 PF00665 Integrase core domain AVS55_RS16190 PF13011 AVS55_RS16190 AVS55_RS16210 PF04233 AVS55_RS16210 AVS55_RS16215 PF13264 AVS55_RS16215 AVS55_RS16220 PF03237 Terminase-like family AVS55_RS16235 PF00665 Integrase core domain AVS55_RS16235 PF13011 AVS55_RS16235 AVS55_RS16265 PF00665 Integrase core domain AVS55_RS16265 PF13011 AVS55_RS16265 AVS55_RS16275 PF03180 NLPA lipoprotein AVS55_RS16280 PF06073 AVS55_RS16280 AVS55_RS16285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVS55_RS16285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVS55_RS16290 PF00005 ABC transporter AVS55_RS16295 PF00005 ABC transporter AVS55_RS16295 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS16300 PF02653 AVS55_RS16300 AVS55_RS16305 PF02653 AVS55_RS16305 AVS55_RS16310 PF13458 Periplasmic binding protein AVS55_RS16315 PF01425 Amidase AVS55_RS16320 PF00484 Carbonic anhydrase AVS55_RS16330 PF00665 Integrase core domain AVS55_RS16330 PF13011 AVS55_RS16330 AVS55_RS16335 PF00270 DEAD/DEAH box helicase AVS55_RS16335 PF00271 Helicase conserved C-terminal domain AVS55_RS16335 PF00570 HRDC domain AVS55_RS16335 PF09382 RQC domain AVS55_RS16335 PF16124 AVS55_RS16335 AVS55_RS16340 PF05491 Holliday junction DNA helicase ruvB C-terminus AVS55_RS16340 PF05496 Holliday junction DNA helicase ruvB N-terminus AVS55_RS16345 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS16350 PF01370 NAD dependent epimerase/dehydratase family AVS55_RS16355 PF01330 RuvA N terminal domain AVS55_RS16355 PF07499 RuvA, C-terminal domain AVS55_RS16355 PF14520 Helix-hairpin-helix domain AVS55_RS16360 PF02075 Crossover junction endodeoxyribonuclease RuvC AVS55_RS16365 PF01808 AICARFT/IMPCHase bienzyme AVS55_RS16365 PF02142 MGS-like domain AVS55_RS16370 PF02954 Bacterial regulatory protein, Fis family AVS55_RS16375 PF01207 Dihydrouridine synthase (Dus) AVS55_RS16380 PF01494 FAD binding domain AVS55_RS16390 PF00557 Metallopeptidase family M24 AVS55_RS16390 PF05195 Aminopeptidase P, N-terminal domain AVS55_RS16395 PF01699 Sodium/calcium exchanger protein AVS55_RS16405 PF00665 Integrase core domain AVS55_RS16405 PF13011 AVS55_RS16405 AVS55_RS16410 PF00665 Integrase core domain AVS55_RS16410 PF13011 AVS55_RS16410 AVS55_RS16415 PF13609 Gram-negative porin AVS55_RS16420 PF09678 AVS55_RS16420 AVS55_RS16425 PF00483 Nucleotidyl transferase AVS55_RS16430 PF01435 Peptidase family M48 AVS55_RS16435 PF12146 Putative lysophospholipase AVS55_RS16440 PF13474 SnoaL-like domain AVS55_RS16445 PF10276 Zinc-finger domain AVS55_RS16450 PF01063 Aminotransferase class IV AVS55_RS16455 PF03591 AVS55_RS16455 AVS55_RS16460 PF05437 AVS55_RS16460 AVS55_RS16465 PF00270 DEAD/DEAH box helicase AVS55_RS16465 PF00271 Helicase conserved C-terminal domain AVS55_RS16470 PF00085 Thioredoxin AVS55_RS16475 PF07264 Etoposide-induced protein 2 AVS55_RS16480 PF00665 Integrase core domain AVS55_RS16480 PF13011 AVS55_RS16480 AVS55_RS16485 PF00994 Probable molybdopterin binding domain AVS55_RS16490 PF01614 Bacterial transcriptional regulator AVS55_RS16490 PF09339 IclR helix-turn-helix domain AVS55_RS16495 PF05785 Rho-activating domain of cytotoxic necrotizing factor AVS55_RS16500 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS16505 PF09361 AVS55_RS16505 AVS55_RS16510 PF01180 Dihydroorotate dehydrogenase AVS55_RS16515 PF04376 AVS55_RS16515 AVS55_RS16515 PF04377 AVS55_RS16515 AVS55_RS16520 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVS55_RS16525 PF00293 NUDIX domain AVS55_RS16525 PF14803 Nudix N-terminal AVS55_RS16530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS16530 PF03466 LysR substrate binding domain AVS55_RS16535 PF07681 AVS55_RS16535 AVS55_RS16540 PF11161 AVS55_RS16540 AVS55_RS16560 PF01810 AVS55_RS16560 AVS55_RS16565 PF00665 Integrase core domain AVS55_RS16565 PF13011 AVS55_RS16565 AVS55_RS16570 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS16570 PF07729 FCD domain AVS55_RS16575 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS16575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS16575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS16580 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS16585 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS55_RS16590 PF00390 Malic enzyme, N-terminal domain AVS55_RS16590 PF01515 Phosphate acetyl/butaryl transferase AVS55_RS16590 PF03949 Malic enzyme, NAD binding domain AVS55_RS16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS16595 PF03466 LysR substrate binding domain AVS55_RS16600 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS16605 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS16610 PF00005 ABC transporter AVS55_RS16610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS16620 PF07171 MlrC C-terminus AVS55_RS16620 PF07364 Protein of unknown function (DUF1485) AVS55_RS16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS16625 PF03466 LysR substrate binding domain AVS55_RS16635 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AVS55_RS16640 PF12840 Helix-turn-helix domain AVS55_RS16645 PF05170 AVS55_RS16645 AVS55_RS16650 PF03476 MOSC N-terminal beta barrel domain AVS55_RS16655 PF03594 AVS55_RS16655 AVS55_RS16660 PF00037 4Fe-4S binding domain AVS55_RS16665 PF01467 Cytidylyltransferase AVS55_RS16670 PF03602 Conserved hypothetical protein 95 AVS55_RS16675 PF00448 SRP54-type protein, GTPase domain AVS55_RS16675 PF02881 SRP54-type protein, helical bundle domain AVS55_RS16685 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS16690 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS16695 PF00005 ABC transporter AVS55_RS16700 PF00665 Integrase core domain AVS55_RS16700 PF13011 AVS55_RS16700 AVS55_RS16705 PF00005 ABC transporter AVS55_RS16710 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein AVS55_RS16715 PF01614 Bacterial transcriptional regulator AVS55_RS16715 PF09339 IclR helix-turn-helix domain AVS55_RS16720 PF08282 haloacid dehalogenase-like hydrolase AVS55_RS16725 PF00925 GTP cyclohydrolase II AVS55_RS16725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVS55_RS16730 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVS55_RS16735 PF01029 NusB family AVS55_RS16740 PF00586 AIR synthase related protein, N-terminal domain AVS55_RS16740 PF02769 AIR synthase related protein, C-terminal domain AVS55_RS16745 PF04608 Phosphatidylglycerophosphatase A AVS55_RS16750 PF02464 Competence-damaged protein AVS55_RS16755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVS55_RS16760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS16765 PF01219 Prokaryotic diacylglycerol kinase AVS55_RS16770 PF03631 AVS55_RS16770 AVS55_RS16775 PF03212 Pertactin AVS55_RS16775 PF03797 Autotransporter beta-domain AVS55_RS16780 PF00118 TCP-1/cpn60 chaperonin family AVS55_RS16785 PF00166 Chaperonin 10 Kd subunit AVS55_RS16805 PF00890 FAD binding domain AVS55_RS16810 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS16815 PF03466 LysR substrate binding domain AVS55_RS16820 PF00890 FAD binding domain AVS55_RS16825 PF00665 Integrase core domain AVS55_RS16825 PF13011 AVS55_RS16825 AVS55_RS16830 PF00665 Integrase core domain AVS55_RS16830 PF13011 AVS55_RS16830 AVS55_RS16835 PF00857 Isochorismatase family AVS55_RS16840 PF00990 GGDEF domain AVS55_RS16840 PF11563 Protoglobin AVS55_RS16845 PF01966 HD domain AVS55_RS16875 PF03781 Sulfatase-modifying factor enzyme 1 AVS55_RS16875 PF12867 DinB superfamily AVS55_RS16880 PF10017 AVS55_RS16880 AVS55_RS16890 PF13091 PLD-like domain AVS55_RS16895 PF00665 Integrase core domain AVS55_RS16895 PF13011 AVS55_RS16895 AVS55_RS16900 PF01645 Conserved region in glutamate synthase AVS55_RS16905 PF04143 AVS55_RS16905 AVS55_RS16910 PF03547 AVS55_RS16910 AVS55_RS16915 PF13673 Acetyltransferase (GNAT) domain AVS55_RS16925 PF03942 AVS55_RS16925 AVS55_RS16935 PF00575 S1 RNA binding domain AVS55_RS16935 PF00773 RNB domain AVS55_RS16935 PF08206 Ribonuclease B OB domain AVS55_RS16940 PF00588 SpoU rRNA Methylase family AVS55_RS16940 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVS55_RS16945 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS55_RS16950 PF13640 2OG-Fe(II) oxygenase superfamily AVS55_RS16955 PF00216 Bacterial DNA-binding protein AVS55_RS16965 PF03544 Gram-negative bacterial TonB protein C-terminal AVS55_RS16970 PF01618 AVS55_RS16970 AVS55_RS16975 PF02472 Biopolymer transport protein ExbD/TolR AVS55_RS16980 PF00072 Response regulator receiver domain AVS55_RS16980 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS16985 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS16990 PF02705 AVS55_RS16990 AVS55_RS16995 PF00764 Arginosuccinate synthase AVS55_RS17000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS55_RS17000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS55_RS17005 PF00202 Aminotransferase class-III AVS55_RS17010 PF12112 Protein of unknown function (DUF3579) AVS55_RS17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17015 PF03466 LysR substrate binding domain AVS55_RS17020 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS17025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS55_RS17025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS55_RS17030 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17045 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS17045 PF07729 FCD domain AVS55_RS17050 PF00665 Integrase core domain AVS55_RS17050 PF13011 AVS55_RS17050 AVS55_RS17055 PF07690 Major Facilitator Superfamily AVS55_RS17060 PF02311 AraC-like ligand binding domain AVS55_RS17060 PF12833 Helix-turn-helix domain AVS55_RS17065 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS17070 PF00578 AhpC/TSA family AVS55_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS17080 PF00672 HAMP domain AVS55_RS17080 PF16524 AVS55_RS17080 AVS55_RS17085 PF00072 Response regulator receiver domain AVS55_RS17085 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS17090 PF00814 Glycoprotease family AVS55_RS17090 PF13673 Acetyltransferase (GNAT) domain AVS55_RS17095 PF03167 Uracil DNA glycosylase superfamily AVS55_RS17100 PF07690 Major Facilitator Superfamily AVS55_RS17105 PF02463 RecF/RecN/SMC N terminal domain AVS55_RS17105 PF06470 SMC proteins Flexible Hinge Domain AVS55_RS17110 PF04354 ZipA, C-terminal FtsZ-binding domain AVS55_RS17115 PF00533 BRCA1 C Terminus (BRCT) domain AVS55_RS17115 PF01653 NAD-dependent DNA ligase adenylation domain AVS55_RS17115 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVS55_RS17115 PF03120 NAD-dependent DNA ligase OB-fold domain AVS55_RS17115 PF12826 Helix-hairpin-helix motif AVS55_RS17115 PF14520 Helix-hairpin-helix domain AVS55_RS17120 PF13616 PPIC-type PPIASE domain AVS55_RS17120 PF13624 SurA N-terminal domain AVS55_RS17125 PF01722 BolA-like protein AVS55_RS17130 PF04279 AVS55_RS17130 AVS55_RS17135 PF01641 SelR domain AVS55_RS17140 PF00005 ABC transporter AVS55_RS17145 PF02361 Cobalt transport protein AVS55_RS17150 PF02632 BioY family AVS55_RS17155 PF13458 Periplasmic binding protein AVS55_RS17160 PF02653 AVS55_RS17160 AVS55_RS17165 PF00005 ABC transporter AVS55_RS17165 PF02653 AVS55_RS17165 AVS55_RS17170 PF01063 Aminotransferase class IV AVS55_RS17175 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AVS55_RS17180 PF02653 AVS55_RS17180 AVS55_RS17185 PF02653 AVS55_RS17185 AVS55_RS17190 PF13458 Periplasmic binding protein AVS55_RS17195 PF00005 ABC transporter AVS55_RS17200 PF00005 ABC transporter AVS55_RS17200 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS17205 PF00633 Helix-hairpin-helix motif AVS55_RS17205 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS55_RS17205 PF10576 Iron-sulfur binding domain of endonuclease III AVS55_RS17210 PF04060 Putative Fe-S cluster AVS55_RS17210 PF14697 4Fe-4S dicluster domain AVS55_RS17215 PF06850 AVS55_RS17215 AVS55_RS17220 PF00175 Oxidoreductase NAD-binding domain AVS55_RS17225 PF00037 4Fe-4S binding domain AVS55_RS17225 PF11953 Domain of unknown function (DUF3470) AVS55_RS17230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVS55_RS17235 PF01042 Endoribonuclease L-PSP AVS55_RS17240 PF03358 NADPH-dependent FMN reductase AVS55_RS17245 PF06167 Glucose-regulated metallo-peptidase M90 AVS55_RS17250 PF02824 TGS domain AVS55_RS17250 PF04607 Region found in RelA / SpoT proteins AVS55_RS17250 PF13291 ACT domain AVS55_RS17250 PF13328 HD domain AVS55_RS17255 PF01546 Peptidase family M20/M25/M40 AVS55_RS17255 PF07687 Peptidase dimerisation domain AVS55_RS17260 PF00291 Pyridoxal-phosphate dependent enzyme AVS55_RS17265 PF00290 Tryptophan synthase alpha chain AVS55_RS17270 PF01039 Carboxyl transferase domain AVS55_RS17280 PF00665 Integrase core domain AVS55_RS17280 PF13011 AVS55_RS17280 AVS55_RS17285 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AVS55_RS17290 PF00575 S1 RNA binding domain AVS55_RS17290 PF10150 Ribonuclease E/G family AVS55_RS17295 PF00849 RNA pseudouridylate synthase AVS55_RS17295 PF01479 S4 domain AVS55_RS17300 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS17305 PF00174 Oxidoreductase molybdopterin binding domain AVS55_RS17310 PF01794 AVS55_RS17310 AVS55_RS17315 PF00665 Integrase core domain AVS55_RS17315 PF13011 AVS55_RS17315 AVS55_RS17320 PF02515 CoA-transferase family III AVS55_RS17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17325 PF03466 LysR substrate binding domain AVS55_RS17330 PF01575 MaoC like domain AVS55_RS17335 PF02515 CoA-transferase family III AVS55_RS17340 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17345 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17350 PF03466 LysR substrate binding domain AVS55_RS17355 PF01042 Endoribonuclease L-PSP AVS55_RS17360 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS17360 PF00175 Oxidoreductase NAD-binding domain AVS55_RS17360 PF00384 Molybdopterin oxidoreductase AVS55_RS17360 PF00970 Oxidoreductase FAD-binding domain AVS55_RS17360 PF01568 Molydopterin dinucleotide binding domain AVS55_RS17360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVS55_RS17365 PF02667 AVS55_RS17365 AVS55_RS17370 PF00171 Aldehyde dehydrogenase family AVS55_RS17375 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS17375 PF07729 FCD domain AVS55_RS17385 PF00313 'Cold-shock' DNA-binding domain AVS55_RS17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17390 PF03466 LysR substrate binding domain AVS55_RS17395 PF00665 Integrase core domain AVS55_RS17395 PF13011 AVS55_RS17395 AVS55_RS17400 PF00665 Integrase core domain AVS55_RS17400 PF13011 AVS55_RS17400 AVS55_RS17410 PF00108 Thiolase, N-terminal domain AVS55_RS17410 PF02803 Thiolase, C-terminal domain AVS55_RS17415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS17420 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS17420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS17425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17425 PF03466 LysR substrate binding domain AVS55_RS17430 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17435 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS17440 PF02515 CoA-transferase family III AVS55_RS17445 PF03741 AVS55_RS17445 AVS55_RS17450 PF02308 AVS55_RS17450 AVS55_RS17455 PF00009 Elongation factor Tu GTP binding domain AVS55_RS17455 PF00679 Elongation factor G C-terminus AVS55_RS17455 PF03144 Elongation factor Tu domain 2 AVS55_RS17455 PF03764 Elongation factor G, domain IV AVS55_RS17455 PF14492 Elongation Factor G, domain II AVS55_RS17460 PF00155 Aminotransferase class I and II AVS55_RS17460 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS17465 PF04273 Putative phosphatase (DUF442) AVS55_RS17470 PF00582 Universal stress protein family AVS55_RS17475 PF00009 Elongation factor Tu GTP binding domain AVS55_RS17480 PF00665 Integrase core domain AVS55_RS17480 PF13011 AVS55_RS17480 AVS55_RS17485 PF00701 Dihydrodipicolinate synthetase family AVS55_RS17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17490 PF03466 LysR substrate binding domain AVS55_RS17495 PF02515 CoA-transferase family III AVS55_RS17500 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS17505 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS17505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS17510 PF01575 MaoC like domain AVS55_RS17520 PF01796 AVS55_RS17520 AVS55_RS17520 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) AVS55_RS17525 PF00108 Thiolase, N-terminal domain AVS55_RS17530 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS17535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS17535 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS17535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS17540 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17545 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS17545 PF13380 CoA binding domain AVS55_RS17545 PF13549 ATP-grasp domain AVS55_RS17545 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS55_RS17550 PF01614 Bacterial transcriptional regulator AVS55_RS17550 PF09339 IclR helix-turn-helix domain AVS55_RS17555 PF00676 Dehydrogenase E1 component AVS55_RS17560 PF02779 Transketolase, pyrimidine binding domain AVS55_RS17560 PF02780 Transketolase, C-terminal domain AVS55_RS17565 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS17570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS55_RS17570 PF00364 Biotin-requiring enzyme AVS55_RS17575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS17575 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS17575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS17580 PF00501 AMP-binding enzyme AVS55_RS17580 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS17590 PF13458 Periplasmic binding protein AVS55_RS17595 PF02653 AVS55_RS17595 AVS55_RS17600 PF00005 ABC transporter AVS55_RS17600 PF02653 AVS55_RS17600 AVS55_RS17605 PF00005 ABC transporter AVS55_RS17610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS55_RS17610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS17615 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS17620 PF04909 Amidohydrolase AVS55_RS17625 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17635 PF01614 Bacterial transcriptional regulator AVS55_RS17635 PF09339 IclR helix-turn-helix domain AVS55_RS17640 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17645 PF00665 Integrase core domain AVS55_RS17645 PF13011 AVS55_RS17645 AVS55_RS17650 PF00899 ThiF family AVS55_RS17655 PF00595 PDZ domain (Also known as DHR or GLGF) AVS55_RS17655 PF03572 Peptidase family S41 AVS55_RS17660 PF01551 Peptidase family M23 AVS55_RS17665 PF00300 Histidine phosphatase superfamily (branch 1) AVS55_RS17670 PF00581 Rhodanese-like domain AVS55_RS17675 PF00462 Glutaredoxin AVS55_RS17680 PF02556 Preprotein translocase subunit SecB AVS55_RS17685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVS55_RS17685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVS55_RS17690 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17695 PF00588 SpoU rRNA Methylase family AVS55_RS17700 PF00156 Phosphoribosyl transferase domain AVS55_RS17705 PF08241 Methyltransferase domain AVS55_RS17710 PF04107 Glutamate-cysteine ligase family 2(GCS2) AVS55_RS17715 PF06808 AVS55_RS17715 AVS55_RS17720 PF04290 AVS55_RS17720 AVS55_RS17725 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS17730 PF00005 ABC transporter AVS55_RS17735 PF09084 NMT1/THI5 like AVS55_RS17740 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS17740 PF01799 [2Fe-2S] binding domain AVS55_RS17740 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) AVS55_RS17745 PF00941 FAD binding domain in molybdopterin dehydrogenase AVS55_RS17750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVS55_RS17750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS55_RS17755 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS55_RS17760 PF00355 Rieske [2Fe-2S] domain AVS55_RS17765 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS17765 PF14759 Reductase C-terminal AVS55_RS17770 PF00355 Rieske [2Fe-2S] domain AVS55_RS17770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS55_RS17775 PF00866 Ring hydroxylating beta subunit AVS55_RS17780 PF00857 Isochorismatase family AVS55_RS17790 PF00561 alpha/beta hydrolase fold AVS55_RS17800 PF04909 Amidohydrolase AVS55_RS17805 PF12804 MobA-like NTP transferase domain AVS55_RS17810 PF02625 XdhC and CoxI family AVS55_RS17810 PF13478 XdhC Rossmann domain AVS55_RS17815 PF01047 MarR family AVS55_RS17820 PF02386 Cation transport protein AVS55_RS17825 PF02080 TrkA-C domain AVS55_RS17825 PF02254 TrkA-N domain AVS55_RS17830 PF00072 Response regulator receiver domain AVS55_RS17835 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS17835 PF00672 HAMP domain AVS55_RS17835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS17835 PF08448 PAS fold AVS55_RS17840 PF14334 AVS55_RS17840 AVS55_RS17845 PF01189 NOL1/NOP2/sun family AVS55_RS17850 PF01810 AVS55_RS17850 AVS55_RS17855 PF01958 Domain of unknown function DUF108 AVS55_RS17855 PF03447 Homoserine dehydrogenase, NAD binding domain AVS55_RS17860 PF13468 Glyoxalase-like domain AVS55_RS17870 PF00665 Integrase core domain AVS55_RS17870 PF13011 AVS55_RS17870 AVS55_RS17875 PF00665 Integrase core domain AVS55_RS17875 PF13011 AVS55_RS17875 AVS55_RS17880 PF01810 AVS55_RS17880 AVS55_RS17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS17885 PF03466 LysR substrate binding domain AVS55_RS17890 PF04314 Protein of unknown function (DUF461) AVS55_RS17895 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS17905 PF00155 Aminotransferase class I and II AVS55_RS17910 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS17920 PF00682 HMGL-like AVS55_RS17925 PF02481 DNA recombination-mediator protein A AVS55_RS17930 PF01037 AsnC family AVS55_RS17930 PF13412 Winged helix-turn-helix DNA-binding AVS55_RS17935 PF00266 Aminotransferase class-V AVS55_RS17940 PF01327 Polypeptide deformylase AVS55_RS17950 PF00665 Integrase core domain AVS55_RS17950 PF13011 AVS55_RS17950 AVS55_RS17955 PF00551 Formyl transferase AVS55_RS17955 PF02911 Formyl transferase, C-terminal domain AVS55_RS17960 PF01243 Pyridoxamine 5'-phosphate oxidase AVS55_RS17965 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS17975 PF03641 Possible lysine decarboxylase AVS55_RS17980 PF00210 Ferritin-like domain AVS55_RS17985 PF00919 Uncharacterized protein family UPF0004 AVS55_RS17985 PF04055 Radical SAM superfamily AVS55_RS17990 PF01361 Tautomerase enzyme AVS55_RS17995 PF01266 FAD dependent oxidoreductase AVS55_RS18000 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18005 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS18005 PF07729 FCD domain AVS55_RS18010 PF00665 Integrase core domain AVS55_RS18010 PF13011 AVS55_RS18010 AVS55_RS18020 PF00202 Aminotransferase class-III AVS55_RS18025 PF00491 Arginase family AVS55_RS18030 PF00665 Integrase core domain AVS55_RS18030 PF13011 AVS55_RS18030 AVS55_RS18035 PF00665 Integrase core domain AVS55_RS18035 PF13011 AVS55_RS18035 AVS55_RS18040 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18045 PF02627 Carboxymuconolactone decarboxylase family AVS55_RS18050 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS18055 PF01614 Bacterial transcriptional regulator AVS55_RS18055 PF09339 IclR helix-turn-helix domain AVS55_RS18060 PF00501 AMP-binding enzyme AVS55_RS18060 PF13193 AMP-binding enzyme C-terminal domain AVS55_RS18065 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18070 PF04115 Ureidoglycolate hydrolase AVS55_RS18075 PF03797 Autotransporter beta-domain AVS55_RS18075 PF12951 AVS55_RS18075 AVS55_RS18080 PF08085 AVS55_RS18080 AVS55_RS18090 PF12167 AVS55_RS18090 AVS55_RS18095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18095 PF03466 LysR substrate binding domain AVS55_RS18100 PF13419 Haloacid dehalogenase-like hydrolase AVS55_RS18105 PF01168 Alanine racemase, N-terminal domain AVS55_RS18105 PF14031 Putative serine dehydratase domain AVS55_RS18110 PF07411 Domain of unknown function (DUF1508) AVS55_RS18115 PF01145 SPFH domain / Band 7 family AVS55_RS18120 PF14497 Glutathione S-transferase, C-terminal domain AVS55_RS18125 PF01042 Endoribonuclease L-PSP AVS55_RS18130 PF00665 Integrase core domain AVS55_RS18130 PF13011 AVS55_RS18130 AVS55_RS18155 PF03837 AVS55_RS18155 AVS55_RS18160 PF09588 YqaJ-like viral recombinase domain AVS55_RS18185 PF12728 Helix-turn-helix domain AVS55_RS18190 PF00589 Phage integrase family AVS55_RS18195 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS18195 PF08521 AVS55_RS18195 AVS55_RS18200 PF11516 Protein of unknown function (DUF3120) AVS55_RS18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18210 PF03466 LysR substrate binding domain AVS55_RS18215 PF02525 Flavodoxin-like fold AVS55_RS18220 PF00665 Integrase core domain AVS55_RS18220 PF13011 AVS55_RS18220 AVS55_RS18225 PF02096 60Kd inner membrane protein AVS55_RS18225 PF14849 YidC periplasmic domain AVS55_RS18230 PF01809 AVS55_RS18230 AVS55_RS18235 PF00825 Ribonuclease P AVS55_RS18240 PF00468 Ribosomal protein L34 AVS55_RS18245 PF00308 Bacterial dnaA protein AVS55_RS18245 PF08299 Bacterial dnaA protein helix-turn-helix AVS55_RS18245 PF11638 DnaA N-terminal domain AVS55_RS18250 PF00712 DNA polymerase III beta subunit, N-terminal domain AVS55_RS18250 PF02767 DNA polymerase III beta subunit, central domain AVS55_RS18250 PF02768 DNA polymerase III beta subunit, C-terminal domain AVS55_RS18255 PF00204 DNA gyrase B AVS55_RS18255 PF00986 DNA gyrase B subunit, carboxyl terminus AVS55_RS18255 PF01751 Toprim domain AVS55_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS18260 PF01614 Bacterial transcriptional regulator AVS55_RS18260 PF09339 IclR helix-turn-helix domain AVS55_RS18265 PF01425 Amidase AVS55_RS18270 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18275 PF00708 Acylphosphatase AVS55_RS18280 PF01070 FMN-dependent dehydrogenase AVS55_RS18285 PF06445 GyrI-like small molecule binding domain AVS55_RS18285 PF12833 Helix-turn-helix domain AVS55_RS18295 PF00665 Integrase core domain AVS55_RS18295 PF13011 AVS55_RS18295 AVS55_RS18300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS55_RS18305 PF13411 MerR HTH family regulatory protein AVS55_RS18310 PF00753 Metallo-beta-lactamase superfamily AVS55_RS18315 PF00665 Integrase core domain AVS55_RS18315 PF13011 AVS55_RS18315 AVS55_RS18320 PF00665 Integrase core domain AVS55_RS18320 PF13011 AVS55_RS18320 AVS55_RS18325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS55_RS18325 PF02770 Acyl-CoA dehydrogenase, middle domain AVS55_RS18340 PF01039 Carboxyl transferase domain AVS55_RS18345 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AVS55_RS18345 PF00364 Biotin-requiring enzyme AVS55_RS18345 PF02785 Biotin carboxylase C-terminal domain AVS55_RS18345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS55_RS18350 PF07866 Protein of unknown function (DUF1653) AVS55_RS18355 PF00202 Aminotransferase class-III AVS55_RS18360 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18365 PF01168 Alanine racemase, N-terminal domain AVS55_RS18365 PF14031 Putative serine dehydratase domain AVS55_RS18370 PF16868 AVS55_RS18370 AVS55_RS18375 PF06808 AVS55_RS18375 AVS55_RS18380 PF00593 TonB dependent receptor AVS55_RS18380 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS18385 PF04361 AVS55_RS18385 AVS55_RS18395 PF09925 AVS55_RS18395 AVS55_RS18395 PF14345 AVS55_RS18395 AVS55_RS18395 PF14351 AVS55_RS18395 AVS55_RS18400 PF01131 DNA topoisomerase AVS55_RS18400 PF01751 Toprim domain AVS55_RS18400 PF13342 AVS55_RS18400 AVS55_RS18405 PF09084 NMT1/THI5 like AVS55_RS18410 PF00005 ABC transporter AVS55_RS18415 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS18420 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS18425 PF00171 Aldehyde dehydrogenase family AVS55_RS18430 PF13561 Enoyl-(Acyl carrier protein) reductase AVS55_RS18435 PF00205 Thiamine pyrophosphate enzyme, central domain AVS55_RS18435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS18435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS55_RS18440 PF01037 AsnC family AVS55_RS18440 PF13404 AsnC-type helix-turn-helix domain AVS55_RS18445 PF01062 AVS55_RS18445 AVS55_RS18450 PF00856 SET domain AVS55_RS18455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVS55_RS18465 PF00665 Integrase core domain AVS55_RS18465 PF13011 AVS55_RS18465 AVS55_RS18470 PF00809 Pterin binding enzyme AVS55_RS18470 PF02310 B12 binding domain AVS55_RS18470 PF02574 Homocysteine S-methyltransferase AVS55_RS18470 PF02607 B12 binding domain AVS55_RS18470 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVS55_RS18475 PF00593 TonB dependent receptor AVS55_RS18475 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS18480 PF01497 Periplasmic binding protein AVS55_RS18485 PF05690 Thiazole biosynthesis protein ThiG AVS55_RS18490 PF08543 Phosphomethylpyrimidine kinase AVS55_RS18495 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AVS55_RS18500 PF02321 Outer membrane efflux protein AVS55_RS18505 PF02321 Outer membrane efflux protein AVS55_RS18510 PF01467 Cytidylyltransferase AVS55_RS18515 PF01548 AVS55_RS18515 AVS55_RS18515 PF02371 AVS55_RS18515 AVS55_RS18520 PF01594 AVS55_RS18520 AVS55_RS18525 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AVS55_RS18530 PF02254 TrkA-N domain AVS55_RS18530 PF07885 Ion channel AVS55_RS18535 PF00665 Integrase core domain AVS55_RS18535 PF13011 AVS55_RS18535 AVS55_RS18540 PF00164 Ribosomal protein S12/S23 AVS55_RS18545 PF00177 Ribosomal protein S7p/S5e AVS55_RS18550 PF00009 Elongation factor Tu GTP binding domain AVS55_RS18550 PF00679 Elongation factor G C-terminus AVS55_RS18550 PF03144 Elongation factor Tu domain 2 AVS55_RS18550 PF03764 Elongation factor G, domain IV AVS55_RS18550 PF14492 Elongation Factor G, domain II AVS55_RS18555 PF00009 Elongation factor Tu GTP binding domain AVS55_RS18555 PF03143 Elongation factor Tu C-terminal domain AVS55_RS18555 PF03144 Elongation factor Tu domain 2 AVS55_RS18560 PF00338 Ribosomal protein S10p/S20e AVS55_RS18565 PF00297 Ribosomal protein L3 AVS55_RS18570 PF00573 Ribosomal protein L4/L1 family AVS55_RS18575 PF00276 Ribosomal protein L23 AVS55_RS18580 PF00181 Ribosomal Proteins L2, RNA binding domain AVS55_RS18580 PF03947 Ribosomal Proteins L2, C-terminal domain AVS55_RS18585 PF00203 Ribosomal protein S19 AVS55_RS18590 PF00237 Ribosomal protein L22p/L17e AVS55_RS18595 PF00189 Ribosomal protein S3, C-terminal domain AVS55_RS18595 PF07650 KH domain AVS55_RS18600 PF00252 Ribosomal protein L16p/L10e AVS55_RS18605 PF00831 Ribosomal L29 protein AVS55_RS18610 PF00366 Ribosomal protein S17 AVS55_RS18615 PF00561 alpha/beta hydrolase fold AVS55_RS18620 PF00171 Aldehyde dehydrogenase family AVS55_RS18630 PF00238 Ribosomal protein L14p/L23e AVS55_RS18635 PF17136 AVS55_RS18635 AVS55_RS18640 PF00281 Ribosomal protein L5 AVS55_RS18640 PF00673 ribosomal L5P family C-terminus AVS55_RS18645 PF00253 Ribosomal protein S14p/S29e AVS55_RS18650 PF00410 Ribosomal protein S8 AVS55_RS18655 PF00347 Ribosomal protein L6 AVS55_RS18660 PF00861 Ribosomal L18p/L5e family AVS55_RS18665 PF00333 Ribosomal protein S5, N-terminal domain AVS55_RS18665 PF03719 Ribosomal protein S5, C-terminal domain AVS55_RS18670 PF00327 Ribosomal protein L30p/L7e AVS55_RS18675 PF00828 Ribosomal protein L18e/L15 AVS55_RS18680 PF00344 SecY translocase AVS55_RS18685 PF01176 Translation initiation factor 1A / IF-1 AVS55_RS18690 PF00444 Ribosomal protein L36 AVS55_RS18695 PF00416 Ribosomal protein S13/S18 AVS55_RS18700 PF00411 Ribosomal protein S11 AVS55_RS18705 PF00163 Ribosomal protein S4/S9 N-terminal domain AVS55_RS18705 PF01479 S4 domain AVS55_RS18710 PF01000 RNA polymerase Rpb3/RpoA insert domain AVS55_RS18710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVS55_RS18710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVS55_RS18715 PF01196 Ribosomal protein L17 AVS55_RS18720 PF01230 HIT domain AVS55_RS18725 PF03091 CutA1 divalent ion tolerance protein AVS55_RS18730 PF02683 AVS55_RS18730 AVS55_RS18730 PF11412 Disulphide bond corrector protein DsbC AVS55_RS18730 PF13899 Thioredoxin-like AVS55_RS18735 PF00892 EamA-like transporter family AVS55_RS18740 PF00490 Delta-aminolevulinic acid dehydratase AVS55_RS18745 PF01926 50S ribosome-binding GTPase AVS55_RS18750 PF00034 Cytochrome c AVS55_RS18755 PF05140 AVS55_RS18755 AVS55_RS18760 PF01578 AVS55_RS18760 AVS55_RS18765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVS55_RS18765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVS55_RS18770 PF13627 AVS55_RS18770 AVS55_RS18775 PF01491 Frataxin-like domain AVS55_RS18780 PF00905 Penicillin binding protein transpeptidase domain AVS55_RS18780 PF00912 Transglycosylase AVS55_RS18780 PF17092 AVS55_RS18780 AVS55_RS18785 PF01202 Shikimate kinase AVS55_RS18790 PF01761 3-dehydroquinate synthase AVS55_RS18795 PF01966 HD domain AVS55_RS18795 PF13286 Phosphohydrolase-associated domain AVS55_RS18800 PF13410 Glutathione S-transferase, C-terminal domain AVS55_RS18800 PF13417 Glutathione S-transferase, N-terminal domain AVS55_RS18810 PF07690 Major Facilitator Superfamily AVS55_RS18815 PF00436 Single-strand binding protein family AVS55_RS18820 PF00593 TonB dependent receptor AVS55_RS18820 PF07715 TonB-dependent Receptor Plug Domain AVS55_RS18825 PF12973 ChrR Cupin-like domain AVS55_RS18830 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS55_RS18835 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS55_RS18840 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18845 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS18845 PF07702 UTRA domain AVS55_RS18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18850 PF03466 LysR substrate binding domain AVS55_RS18855 PF01979 Amidohydrolase family AVS55_RS18860 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS18865 PF00534 Glycosyl transferases group 1 AVS55_RS18865 PF13439 Glycosyltransferase Family 4 AVS55_RS18870 PF10707 AVS55_RS18870 AVS55_RS18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18875 PF03466 LysR substrate binding domain AVS55_RS18880 PF09084 NMT1/THI5 like AVS55_RS18885 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS18890 PF00005 ABC transporter AVS55_RS18895 PF01266 FAD dependent oxidoreductase AVS55_RS18905 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS18910 PF01274 Malate synthase AVS55_RS18915 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS18915 PF07729 FCD domain AVS55_RS18920 PF03435 Saccharopine dehydrogenase AVS55_RS18920 PF16653 AVS55_RS18920 AVS55_RS18925 PF13663 AVS55_RS18925 AVS55_RS18930 PF01040 UbiA prenyltransferase family AVS55_RS18935 PF00155 Aminotransferase class I and II AVS55_RS18940 PF13185 GAF domain AVS55_RS18945 PF00701 Dihydrodipicolinate synthetase family AVS55_RS18950 PF00665 Integrase core domain AVS55_RS18950 PF13011 AVS55_RS18950 AVS55_RS18960 PF01476 LysM domain AVS55_RS18960 PF04972 BON domain AVS55_RS18965 PF02597 ThiS family AVS55_RS18970 PF00561 alpha/beta hydrolase fold AVS55_RS18975 PF02390 Putative methyltransferase AVS55_RS18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS18980 PF03466 LysR substrate binding domain AVS55_RS18990 PF00682 HMGL-like AVS55_RS18995 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19005 PF07080 Protein of unknown function (DUF1348) AVS55_RS19010 PF00665 Integrase core domain AVS55_RS19010 PF13011 AVS55_RS19010 AVS55_RS19015 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS19020 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19025 PF09084 NMT1/THI5 like AVS55_RS19030 PF00392 Bacterial regulatory proteins, gntR family AVS55_RS19030 PF07702 UTRA domain AVS55_RS19035 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19040 PF09084 NMT1/THI5 like AVS55_RS19045 PF00005 ABC transporter AVS55_RS19050 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS19055 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19060 PF00107 Zinc-binding dehydrogenase AVS55_RS19060 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS19065 PF02515 CoA-transferase family III AVS55_RS19070 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS19075 PF00293 NUDIX domain AVS55_RS19075 PF09297 NADH pyrophosphatase zinc ribbon domain AVS55_RS19080 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS55_RS19080 PF00175 Oxidoreductase NAD-binding domain AVS55_RS19080 PF00970 Oxidoreductase FAD-binding domain AVS55_RS19085 PF01425 Amidase AVS55_RS19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS55_RS19095 PF03466 LysR substrate binding domain AVS55_RS19100 PF13458 Periplasmic binding protein AVS55_RS19105 PF06545 Protein of unknown function (DUF1116) AVS55_RS19110 PF00005 ABC transporter AVS55_RS19110 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS55_RS19115 PF02653 AVS55_RS19115 AVS55_RS19120 PF02653 AVS55_RS19120 AVS55_RS19130 PF00355 Rieske [2Fe-2S] domain AVS55_RS19145 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVS55_RS19145 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVS55_RS19150 PF00665 Integrase core domain AVS55_RS19150 PF13011 AVS55_RS19150 AVS55_RS19155 PF00534 Glycosyl transferases group 1 AVS55_RS19155 PF13439 Glycosyltransferase Family 4 AVS55_RS19160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS55_RS19160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS55_RS19160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS55_RS19165 PF07690 Major Facilitator Superfamily AVS55_RS19170 PF00132 Bacterial transferase hexapeptide (six repeats) AVS55_RS19170 PF12804 MobA-like NTP transferase domain AVS55_RS19180 PF05433 AVS55_RS19180 AVS55_RS19185 PF12512 AVS55_RS19185 AVS55_RS19190 PF02630 SCO1/SenC AVS55_RS19195 PF01040 UbiA prenyltransferase family AVS55_RS19200 PF02628 AVS55_RS19200 AVS55_RS19210 PF02104 AVS55_RS19210 AVS55_RS19215 PF11137 AVS55_RS19215 AVS55_RS19220 PF00510 Cytochrome c oxidase subunit III AVS55_RS19225 PF11174 AVS55_RS19225 AVS55_RS19235 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS55_RS19240 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVS55_RS19240 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVS55_RS19240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS55_RS19245 PF00293 NUDIX domain AVS55_RS19250 PF00027 Cyclic nucleotide-binding domain AVS55_RS19250 PF00999 Sodium/hydrogen exchanger family AVS55_RS19255 PF00149 Calcineurin-like phosphoesterase AVS55_RS19260 PF00140 Sigma-70 factor, region 1 AVS55_RS19260 PF04542 Sigma-70 region 2 AVS55_RS19260 PF04545 Sigma-70, region 4 AVS55_RS19270 PF00756 Putative esterase AVS55_RS19275 PF00107 Zinc-binding dehydrogenase AVS55_RS19275 PF08240 Alcohol dehydrogenase GroES-like domain AVS55_RS19285 PF00310 Glutamine amidotransferases class-II AVS55_RS19285 PF01493 GXGXG motif AVS55_RS19285 PF01645 Conserved region in glutamate synthase AVS55_RS19285 PF04898 Glutamate synthase central domain AVS55_RS19290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS55_RS19290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVS55_RS19295 PF03922 OmpW family AVS55_RS19300 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19305 PF00005 ABC transporter AVS55_RS19310 PF02405 AVS55_RS19310 AVS55_RS19315 PF02470 AVS55_RS19315 AVS55_RS19320 PF04333 AVS55_RS19320 AVS55_RS19325 PF05494 Toluene tolerance, Ttg2 AVS55_RS19330 PF00005 ABC transporter AVS55_RS19335 PF01061 AVS55_RS19335 AVS55_RS19340 PF01722 BolA-like protein AVS55_RS19345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVS55_RS19350 PF01634 ATP phosphoribosyltransferase AVS55_RS19355 PF00815 Histidinol dehydrogenase AVS55_RS19360 PF00155 Aminotransferase class I and II AVS55_RS19365 PF00475 Imidazoleglycerol-phosphate dehydratase AVS55_RS19370 PF00117 Glutamine amidotransferase class-I AVS55_RS19375 PF00977 Histidine biosynthesis protein AVS55_RS19380 PF00977 Histidine biosynthesis protein AVS55_RS19385 PF01502 Phosphoribosyl-AMP cyclohydrolase AVS55_RS19390 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVS55_RS19395 PF01230 HIT domain AVS55_RS19400 PF02416 mttA/Hcf106 family AVS55_RS19405 PF02416 mttA/Hcf106 family AVS55_RS19410 PF00902 Sec-independent protein translocase protein (TatC) AVS55_RS19415 PF13560 Helix-turn-helix domain AVS55_RS19415 PF13683 AVS55_RS19415 AVS55_RS19420 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19425 PF02917 Pertussis toxin, subunit 1 AVS55_RS19430 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS55_RS19430 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS55_RS19435 PF09275 Pertussis toxin S4 subunit AVS55_RS19440 PF09276 Pertussis toxin S5 subunit AVS55_RS19445 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS55_RS19445 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS55_RS19450 PF04956 AVS55_RS19450 AVS55_RS19455 PF05101 AVS55_RS19455 AVS55_RS19460 PF03135 AVS55_RS19460 AVS55_RS19465 PF04610 AVS55_RS19465 AVS55_RS19475 PF04335 VirB8 protein AVS55_RS19480 PF03524 Conjugal transfer protein AVS55_RS19485 PF03743 Bacterial conjugation TrbI-like protein AVS55_RS19490 PF00437 Type II/IV secretion system protein AVS55_RS19500 PF00892 EamA-like transporter family AVS55_RS19505 PF12833 Helix-turn-helix domain AVS55_RS19510 PF06803 AVS55_RS19510 AVS55_RS19515 PF11067 AVS55_RS19515 AVS55_RS19520 PF01926 50S ribosome-binding GTPase AVS55_RS19520 PF11981 AVS55_RS19520 AVS55_RS19525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS19530 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19535 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19535 PF12911 AVS55_RS19535 AVS55_RS19540 PF00005 ABC transporter AVS55_RS19545 PF00665 Integrase core domain AVS55_RS19545 PF13011 AVS55_RS19545 AVS55_RS19550 PF01960 ArgJ family AVS55_RS19555 PF05673 Protein of unknown function (DUF815) AVS55_RS19560 PF00293 NUDIX domain AVS55_RS19560 PF02581 Thiamine monophosphate synthase/TENI AVS55_RS19565 PF00665 Integrase core domain AVS55_RS19565 PF13011 AVS55_RS19565 AVS55_RS19570 PF00665 Integrase core domain AVS55_RS19570 PF13011 AVS55_RS19570 AVS55_RS19575 PF00665 Integrase core domain AVS55_RS19575 PF13011 AVS55_RS19575 AVS55_RS19580 PF02321 Outer membrane efflux protein AVS55_RS19585 PF00873 AcrB/AcrD/AcrF family AVS55_RS19590 PF00873 AcrB/AcrD/AcrF family AVS55_RS19595 PF13437 HlyD family secretion protein AVS55_RS19595 PF13533 Biotin-lipoyl like AVS55_RS19600 PF07072 Protein of unknown function (DUF1342) AVS55_RS19605 PF01121 Dephospho-CoA kinase AVS55_RS19610 PF01478 Type IV leader peptidase family AVS55_RS19610 PF06750 AVS55_RS19610 AVS55_RS19615 PF04170 NlpE N-terminal domain AVS55_RS19620 PF00196 Bacterial regulatory proteins, luxR family AVS55_RS19625 PF02569 Pantoate-beta-alanine ligase AVS55_RS19630 PF02616 ScpA/B protein AVS55_RS19635 PF11943 AVS55_RS19635 AVS55_RS19640 PF07690 Major Facilitator Superfamily AVS55_RS19645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVS55_RS19645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVS55_RS19650 PF03653 AVS55_RS19650 AVS55_RS19655 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19660 PF00005 ABC transporter AVS55_RS19665 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19670 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19675 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS55_RS19680 PF00005 ABC transporter AVS55_RS19685 PF02687 AVS55_RS19685 AVS55_RS19690 PF03975 CheD chemotactic sensory transduction AVS55_RS19695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS55_RS19700 PF00633 Helix-hairpin-helix motif AVS55_RS19700 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS55_RS19700 PF14815 NUDIX domain AVS55_RS19705 PF13560 Helix-turn-helix domain AVS55_RS19710 PF08241 Methyltransferase domain AVS55_RS19715 PF00665 Integrase core domain AVS55_RS19715 PF13011 AVS55_RS19715 AVS55_RS19720 PF02515 CoA-transferase family III AVS55_RS19725 PF02515 CoA-transferase family III AVS55_RS19730 PF03972 MmgE/PrpD family AVS55_RS19735 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19740 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS19745 PF00881 Nitroreductase family AVS55_RS19750 PF00440 Bacterial regulatory proteins, tetR family AVS55_RS19755 PF00682 HMGL-like AVS55_RS19760 PF00378 Enoyl-CoA hydratase/isomerase family AVS55_RS19765 PF02515 CoA-transferase family III AVS55_RS19770 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19775 PF00665 Integrase core domain AVS55_RS19775 PF13011 AVS55_RS19775 AVS55_RS19780 PF00199 Catalase AVS55_RS19780 PF06628 Catalase-related immune-responsive AVS55_RS19785 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19790 PF00005 ABC transporter AVS55_RS19795 PF13379 NMT1-like family AVS55_RS19800 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS55_RS19805 PF01546 Peptidase family M20/M25/M40 AVS55_RS19805 PF07687 Peptidase dimerisation domain AVS55_RS19810 PF00005 ABC transporter AVS55_RS19810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS19815 PF00005 ABC transporter AVS55_RS19815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS55_RS19820 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19820 PF12911 AVS55_RS19820 AVS55_RS19825 PF00528 Binding-protein-dependent transport system inner membrane component AVS55_RS19830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS55_RS19835 PF01926 50S ribosome-binding GTPase AVS55_RS19835 PF10396 GTP-binding protein TrmE N-terminus AVS55_RS19835 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AVS55_RS19840 PF07690 Major Facilitator Superfamily AVS55_RS19845 PF00072 Response regulator receiver domain AVS55_RS19845 PF00486 Transcriptional regulatory protein, C terminal AVS55_RS19850 PF00512 His Kinase A (phospho-acceptor) domain AVS55_RS19850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS55_RS19850 PF08521 AVS55_RS19850 AVS55_RS19855 PF03401 Tripartite tricarboxylate transporter family receptor AVS55_RS19860 PF07331 AVS55_RS19860 AVS55_RS19865 PF01970 AVS55_RS19865 AVS55_RS19870 PF00155 Aminotransferase class I and II AVS55_RS19875 PF00313 'Cold-shock' DNA-binding domain