ABC04_RS00005	SM01228	ABC04_RS00005
ABC04_RS00025	SM00470	ParB-like nuclease domain
ABC04_RS00030	SM00870	ABC04_RS00030
ABC04_RS00070	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
ABC04_RS00070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
ABC04_RS00075	SM00649	Ribosomal protein L11/L12
ABC04_RS00100	SM00663	RNA polymerase I subunit A N-terminus
ABC04_RS00130	SM00448	cheY-homologous receiver domain
ABC04_RS00130	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS00200	SM00563	Phosphate acyltransferases
ABC04_RS00240	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS00290	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS00305	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS00400	SM00387	Histidine kinase-like ATPases
ABC04_RS00410	SM00644	ABC04_RS00410
ABC04_RS00425	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS00425	SM00962	SRP54-type protein, GTPase domain
ABC04_RS00425	SM00963	SRP54-type protein, helical bundle domain
ABC04_RS00525	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS00545	SM00936	Penicillin-binding protein 5, C-terminal domain 
ABC04_RS00565	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABC04_RS00610	SM00836	DALR anticodon binding domain
ABC04_RS00610	SM01016	Arginyl tRNA synthetase N terminal dom
ABC04_RS00645	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS00660	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS00695	SM00917	LeuA allosteric (dimerisation) domain
ABC04_RS00750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS00750	SM00895	ABC04_RS00750
ABC04_RS00780	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS00790	SM00797	Allophanate hydrolase subunit 2
ABC04_RS00795	SM00796	Allophanate hydrolase subunit 1
ABC04_RS00820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS00820	SM00387	Histidine kinase-like ATPases
ABC04_RS00820	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS00825	SM00448	cheY-homologous receiver domain
ABC04_RS00825	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS00830	SM00091	PAS domain
ABC04_RS00830	SM00387	Histidine kinase-like ATPases
ABC04_RS00830	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS00835	SM00448	cheY-homologous receiver domain
ABC04_RS00835	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS00845	SM00978	ABC04_RS00845
ABC04_RS00870	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS00885	SM00487	DEAD-like helicases superfamily
ABC04_RS00885	SM00490	helicase superfamily c-terminal domain
ABC04_RS00930	SM00450	Rhodanese Homology Domain
ABC04_RS01025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS01025	SM00895	ABC04_RS01025
ABC04_RS01075	SM00882	Coenzyme A transferase
ABC04_RS01080	SM00882	Coenzyme A transferase
ABC04_RS01085	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS01105	SM00869	Autotransporter beta-domain
ABC04_RS01140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS01140	SM00895	ABC04_RS01140
ABC04_RS01210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS01210	SM00895	ABC04_RS01210
ABC04_RS01250	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS01265	SM00853	MutL C terminal dimerisation domain
ABC04_RS01265	SM01340	ABC04_RS01265
ABC04_RS01275	SM00646	ABC04_RS01275
ABC04_RS01355	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS01360	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS01445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ABC04_RS01475	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS01485	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS01535	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABC04_RS01560	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS01565	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS01635	SM00732	Likely ribonuclease with RNase H fold.
ABC04_RS01650	SM00563	Phosphate acyltransferases
ABC04_RS01700	SM00849	Metallo-beta-lactamase superfamily
ABC04_RS01730	SM00267	diguanylate cyclase
ABC04_RS01755	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS01775	SM00965	Secretin and TonB N terminus short domain
ABC04_RS01820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS01820	SM00895	ABC04_RS01820
ABC04_RS01835	SM01236	ABC04_RS01835
ABC04_RS01855	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS01880	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ABC04_RS01895	SM00845	GatB domain
ABC04_RS01970	SM00749	bacterial OsmY and nodulation domain
ABC04_RS02035	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS02075	SM00450	Rhodanese Homology Domain
ABC04_RS02180	SM00479	ABC04_RS02180
ABC04_RS02210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS02215	SM00838	Elongation factor G C-terminus
ABC04_RS02215	SM00889	Elongation factor G, domain IV
ABC04_RS02285	SM00357	Cold shock protein domain
ABC04_RS02295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS02295	SM00895	ABC04_RS02295
ABC04_RS02310	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABC04_RS02375	SM00363	S4 RNA-binding domain
ABC04_RS02380	SM00316	Ribosomal protein S1-like RNA-binding domain
ABC04_RS02420	SM00954	Region found in RelA / SpoT proteins
ABC04_RS02465	SM00478	endonuclease III
ABC04_RS02465	SM00525	ABC04_RS02465
ABC04_RS02470	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS02475	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS02505	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS02530	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS02555	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ABC04_RS02555	SM00292	breast cancer carboxy-terminal domain
ABC04_RS02555	SM00532	Ligase N family
ABC04_RS02560	SM00771	ZipA, C-terminal domain (FtsZ-binding)
ABC04_RS02565	SM00968	SMC proteins Flexible Hinge Domain
ABC04_RS02575	SM00986	Uracil DNA glycosylase superfamily
ABC04_RS02575	SM00987	UreE urease accessory protein, C-terminal domain 
ABC04_RS02585	SM00448	cheY-homologous receiver domain
ABC04_RS02585	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS02600	SM00387	Histidine kinase-like ATPases
ABC04_RS02600	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS02615	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS02630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS02630	SM00895	ABC04_RS02630
ABC04_RS02635	SM01130	ABC04_RS02635
ABC04_RS02690	SM00387	Histidine kinase-like ATPases
ABC04_RS02690	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS02695	SM00448	cheY-homologous receiver domain
ABC04_RS02695	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS02720	SM00411	bacterial (prokaryotic) histone like domain
ABC04_RS02725	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
ABC04_RS02735	SM00967	RNA 2'-O ribose methyltransferase substrate binding
ABC04_RS02740	SM00316	Ribosomal protein S1-like RNA-binding domain
ABC04_RS02740	SM00357	Cold shock protein domain
ABC04_RS02740	SM00955	ABC04_RS02740
ABC04_RS02750	SM01144	ABC04_RS02750
ABC04_RS02785	SM00155	Phospholipase D. Active site motifs.
ABC04_RS02830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABC04_RS02835	SM00267	diguanylate cyclase
ABC04_RS02890	SM00883	Chaperonin 10 Kd subunit
ABC04_RS02900	SM00869	Autotransporter beta-domain
ABC04_RS02920	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
ABC04_RS02960	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS03000	SM00880	ABC04_RS03000
ABC04_RS03005	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS03005	SM00962	SRP54-type protein, GTPase domain
ABC04_RS03005	SM00963	SRP54-type protein, helical bundle domain
ABC04_RS03040	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ABC04_RS03070	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS03090	SM00919	Malic enzyme, NAD binding domain
ABC04_RS03090	SM01274	ABC04_RS03090
ABC04_RS03110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS03110	SM00895	ABC04_RS03110
ABC04_RS03195	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS03200	SM00852	Probable molybdopterin binding domain
ABC04_RS03220	SM00487	DEAD-like helicases superfamily
ABC04_RS03220	SM00490	helicase superfamily c-terminal domain
ABC04_RS03295	SM01011	Aminopeptidase P, N-terminal domain
ABC04_RS03320	SM00798	AICARFT/IMPCHase bienzyme
ABC04_RS03320	SM00851	MGS-like domain
ABC04_RS03330	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ABC04_RS03345	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS03350	SM00341	Helicase and RNase D C-terminal
ABC04_RS03350	SM00487	DEAD-like helicases superfamily
ABC04_RS03350	SM00490	helicase superfamily c-terminal domain
ABC04_RS03350	SM00956	ABC04_RS03350
ABC04_RS03365	SM00947	Carbonic anhydrase
ABC04_RS03390	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS03395	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS03635	SM00448	cheY-homologous receiver domain
ABC04_RS03635	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS03690	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS03740	SM00650	Ribosomal RNA adenine dimethylases
ABC04_RS03805	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS03825	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS03855	SM00867	YceI-like domain 
ABC04_RS03860	SM00965	Secretin and TonB N terminus short domain
ABC04_RS03885	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS03895	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS03900	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS03905	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
ABC04_RS03985	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS04005	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS04020	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS04050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS04050	SM00895	ABC04_RS04050
ABC04_RS04055	SM00869	Autotransporter beta-domain
ABC04_RS04060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS04060	SM00895	ABC04_RS04060
ABC04_RS04065	SM00829	Enoylreductase
ABC04_RS04085	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS04145	SM00487	DEAD-like helicases superfamily
ABC04_RS04145	SM00490	helicase superfamily c-terminal domain
ABC04_RS04145	SM00982	ABC04_RS04145
ABC04_RS04145	SM01058	CarD-like/TRCF domain
ABC04_RS04230	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
ABC04_RS04235	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
ABC04_RS04295	SM00014	Acid phosphatase homologues
ABC04_RS04355	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS04380	SM00450	Rhodanese Homology Domain
ABC04_RS04440	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS04465	SM00829	Enoylreductase
ABC04_RS04495	SM00316	Ribosomal protein S1-like RNA-binding domain
ABC04_RS04495	SM00322	K homology RNA-binding domain
ABC04_RS04500	SM01387	ABC04_RS04500
ABC04_RS04545	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS04625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS04625	SM00866	ABC04_RS04625
ABC04_RS04630	SM00878	Biotin carboxylase C-terminal domain
ABC04_RS04680	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS04790	SM00434	DNA Topoisomerase IV
ABC04_RS04800	SM00830	Chorismate mutase type II
ABC04_RS04820	SM00316	Ribosomal protein S1-like RNA-binding domain
ABC04_RS04825	SM00411	bacterial (prokaryotic) histone like domain
ABC04_RS04875	SM00893	Electron transfer flavoprotein domain
ABC04_RS04880	SM00893	Electron transfer flavoprotein domain
ABC04_RS04915	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS04930	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABC04_RS04980	SM00363	S4 RNA-binding domain
ABC04_RS05025	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS05025	SM00448	cheY-homologous receiver domain
ABC04_RS05030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ABC04_RS05030	SM00091	PAS domain
ABC04_RS05030	SM00387	Histidine kinase-like ATPases
ABC04_RS05030	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS05065	SM00861	Transketolase, pyrimidine binding domain
ABC04_RS05070	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
ABC04_RS05125	SM00271	DnaJ molecular chaperone homology domain
ABC04_RS05145	SM00852	Probable molybdopterin binding domain
ABC04_RS05165	SM00316	Ribosomal protein S1-like RNA-binding domain
ABC04_RS05200	SM00448	cheY-homologous receiver domain
ABC04_RS05205	SM00073	Histidine Phosphotransfer domain
ABC04_RS05205	SM00260	Two component signalling adaptor domain
ABC04_RS05205	SM00387	Histidine kinase-like ATPases
ABC04_RS05205	SM01231	ABC04_RS05205
ABC04_RS05210	SM00260	Two component signalling adaptor domain
ABC04_RS05215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABC04_RS05215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS05225	SM00448	cheY-homologous receiver domain
ABC04_RS05230	SM00448	cheY-homologous receiver domain
ABC04_RS05270	SM01091	Transporter associated domain
ABC04_RS05285	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABC04_RS05310	SM01323	ABC04_RS05310
ABC04_RS05340	SM00869	Autotransporter beta-domain
ABC04_RS05390	SM00919	Malic enzyme, NAD binding domain
ABC04_RS05390	SM01274	ABC04_RS05390
ABC04_RS05415	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS05460	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS05470	SM01103	ABC04_RS05470
ABC04_RS05510	SM00116	Domain in cystathionine beta-synthase and other proteins.
ABC04_RS05530	SM00448	cheY-homologous receiver domain
ABC04_RS05530	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS05535	SM00052	Putative diguanylate phosphodiesterase
ABC04_RS05535	SM00267	diguanylate cyclase
ABC04_RS05535	SM00387	Histidine kinase-like ATPases
ABC04_RS05535	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS05545	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS05565	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS05590	SM00822	ABC04_RS05590
ABC04_RS05615	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS05625	SM00869	Autotransporter beta-domain
ABC04_RS05650	SM00849	Metallo-beta-lactamase superfamily
ABC04_RS05660	SM00481	DNA polymerase alpha chain like domain
ABC04_RS05680	SM00919	Malic enzyme, NAD binding domain
ABC04_RS05680	SM01274	ABC04_RS05680
ABC04_RS05690	SM00344	helix_turn_helix ASNC type
ABC04_RS05700	SM00861	Transketolase, pyrimidine binding domain
ABC04_RS05765	SM00316	Ribosomal protein S1-like RNA-binding domain
ABC04_RS05765	SM00732	Likely ribonuclease with RNase H fold.
ABC04_RS05770	SM00491	ABC04_RS05770
ABC04_RS05780	SM00363	S4 RNA-binding domain
ABC04_RS05795	SM00822	ABC04_RS05795
ABC04_RS05850	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABC04_RS05860	SM00822	ABC04_RS05860
ABC04_RS05885	SM01007	Class II Aldolase and Adducin N-terminal domain
ABC04_RS05965	SM01211	ABC04_RS05965
ABC04_RS05970	SM00912	haemagglutination activity domain
ABC04_RS05985	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABC04_RS05990	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS05995	SM01007	Class II Aldolase and Adducin N-terminal domain
ABC04_RS06030	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS06035	SM01130	ABC04_RS06035
ABC04_RS06080	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS06090	SM00420	helix_turn_helix, Deoxyribose operon repressor
ABC04_RS06090	SM01134	ABC04_RS06090
ABC04_RS06095	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS06100	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS06135	SM00344	helix_turn_helix ASNC type
ABC04_RS06175	SM00869	Autotransporter beta-domain
ABC04_RS06185	SM00116	Domain in cystathionine beta-synthase and other proteins.
ABC04_RS06185	SM01240	ABC04_RS06185
ABC04_RS06200	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS06225	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS06240	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS06285	SM00849	Metallo-beta-lactamase superfamily
ABC04_RS06285	SM01027	Beta-Casp domain
ABC04_RS06310	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS06330	SM00829	Enoylreductase
ABC04_RS06340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS06380	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS06385	SM00354	helix_turn _helix lactose operon repressor
ABC04_RS06445	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS06485	SM00873	B3/4 domain
ABC04_RS06485	SM00874	tRNA synthetase B5 domain
ABC04_RS06485	SM00896	Ferredoxin-fold anticodon binding domain
ABC04_RS06490	SM00411	bacterial (prokaryotic) histone like domain
ABC04_RS06495	SM00422	helix_turn_helix, mercury resistance
ABC04_RS06600	SM00822	ABC04_RS06600
ABC04_RS06615	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS06630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS06630	SM00387	Histidine kinase-like ATPases
ABC04_RS06630	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS06635	SM00448	cheY-homologous receiver domain
ABC04_RS06635	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS06640	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS06670	SM00881	CoA binding domain
ABC04_RS06740	SM00858	ABC04_RS06740
ABC04_RS06750	SM00240	Forkhead associated domain
ABC04_RS06750	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS06900	SM00271	DnaJ molecular chaperone homology domain
ABC04_RS06925	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS06950	SM01329	ABC04_RS06950
ABC04_RS06970	SM00448	cheY-homologous receiver domain
ABC04_RS06970	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS07025	SM00463	Small MutS-related domain
ABC04_RS07035	SM00843	ABC04_RS07035
ABC04_RS07045	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07075	SM00267	diguanylate cyclase
ABC04_RS07100	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS07120	SM01006	Siderophore biosynthesis protein domain
ABC04_RS07170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
ABC04_RS07170	SM00267	diguanylate cyclase
ABC04_RS07190	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS07190	SM00448	cheY-homologous receiver domain
ABC04_RS07195	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ABC04_RS07245	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS07260	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07280	SM00834	Putative regulatory protein
ABC04_RS07295	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS07325	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS07340	SM01001	AIR carboxylase
ABC04_RS07355	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS07360	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS07370	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS07370	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ABC04_RS07380	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07470	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07480	SM00493	ABC04_RS07480
ABC04_RS07555	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
ABC04_RS07555	SM00534	ATPase domain of DNA mismatch repair MUTS family
ABC04_RS07560	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
ABC04_RS07575	SM01130	ABC04_RS07575
ABC04_RS07595	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS07595	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ABC04_RS07605	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABC04_RS07610	SM00954	Region found in RelA / SpoT proteins
ABC04_RS07615	SM01409	ABC04_RS07615
ABC04_RS07620	SM00072	Guanylate kinase homologues.
ABC04_RS07635	SM00822	ABC04_RS07635
ABC04_RS07650	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS07685	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABC04_RS07685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS07690	SM00052	Putative diguanylate phosphodiesterase
ABC04_RS07690	SM00267	diguanylate cyclase
ABC04_RS07705	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABC04_RS07710	SM01230	ABC04_RS07710
ABC04_RS07715	SM00091	PAS domain
ABC04_RS07715	SM00387	Histidine kinase-like ATPases
ABC04_RS07715	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS07720	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07720	SM00448	cheY-homologous receiver domain
ABC04_RS07745	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07790	SM00487	DEAD-like helicases superfamily
ABC04_RS07790	SM00490	helicase superfamily c-terminal domain
ABC04_RS07840	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07865	SM00984	UDP binding domain
ABC04_RS07915	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07920	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS07975	SM00327	von Willebrand factor (vWF) type A domain
ABC04_RS07980	SM00028	Tetratricopeptide repeats
ABC04_RS07980	SM00327	von Willebrand factor (vWF) type A domain
ABC04_RS08020	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS08020	SM00448	cheY-homologous receiver domain
ABC04_RS08025	SM00869	Autotransporter beta-domain
ABC04_RS08030	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS08135	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ABC04_RS08150	SM00822	ABC04_RS08150
ABC04_RS08250	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS08255	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS08335	SM00248	ankyrin repeats
ABC04_RS08340	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS08345	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS08345	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
ABC04_RS08355	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS08365	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ABC04_RS08405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS08405	SM00895	ABC04_RS08405
ABC04_RS08450	SM00052	Putative diguanylate phosphodiesterase
ABC04_RS08455	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS08455	SM00073	Histidine Phosphotransfer domain
ABC04_RS08455	SM00091	PAS domain
ABC04_RS08455	SM00387	Histidine kinase-like ATPases
ABC04_RS08455	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS08455	SM00448	cheY-homologous receiver domain
ABC04_RS08460	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS08460	SM00448	cheY-homologous receiver domain
ABC04_RS08465	SM00912	haemagglutination activity domain
ABC04_RS08560	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS08580	SM01091	Transporter associated domain
ABC04_RS08600	SM00028	Tetratricopeptide repeats
ABC04_RS08605	SM00840	ABC04_RS08605
ABC04_RS08610	SM00478	endonuclease III
ABC04_RS08725	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS08740	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS08745	SM00881	CoA binding domain
ABC04_RS08775	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ABC04_RS08800	SM00028	Tetratricopeptide repeats
ABC04_RS08815	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABC04_RS08820	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS08825	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS08870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS08890	SM00318	Staphylococcal nuclease homologues
ABC04_RS08910	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS08915	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABC04_RS08960	SM00858	ABC04_RS08960
ABC04_RS08990	SM00028	Tetratricopeptide repeats
ABC04_RS09005	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS09035	SM00841	Elongation factor P, C-terminal
ABC04_RS09035	SM01185	ABC04_RS09035
ABC04_RS09095	SM00479	ABC04_RS09095
ABC04_RS09240	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABC04_RS09245	SM00411	bacterial (prokaryotic) histone like domain
ABC04_RS09300	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS09320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS09320	SM00895	ABC04_RS09320
ABC04_RS09365	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS09385	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS09420	SM00278	Helix-hairpin-helix DNA-binding motif class 1
ABC04_RS09420	SM00465	GIY-YIG type nucleases (URI domain)
ABC04_RS09595	SM00822	ABC04_RS09595
ABC04_RS09685	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
ABC04_RS09695	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS09705	SM00464	Found in ATP-dependent protease La (LON)
ABC04_RS09740	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS09760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS09760	SM00895	ABC04_RS09760
ABC04_RS09775	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ABC04_RS09795	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS09835	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS09935	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS09985	SM00400	zinc finger
ABC04_RS09985	SM00493	ABC04_RS09985
ABC04_RS09985	SM00766	DNA primase DnaG DnaB-binding
ABC04_RS10000	SM00788	Adenylosuccinate synthetase
ABC04_RS10010	SM00244	prohibitin homologues
ABC04_RS10015	SM00244	prohibitin homologues
ABC04_RS10035	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS10040	SM00564	beta-propeller repeat
ABC04_RS10070	SM00562	ABC04_RS10070
ABC04_RS10085	SM00448	cheY-homologous receiver domain
ABC04_RS10090	SM00387	Histidine kinase-like ATPases
ABC04_RS10090	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS10140	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
ABC04_RS10190	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS10255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS10255	SM00866	ABC04_RS10255
ABC04_RS10310	SM00271	DnaJ molecular chaperone homology domain
ABC04_RS10335	SM00226	Low molecular weight phosphatase family
ABC04_RS10340	SM00487	DEAD-like helicases superfamily
ABC04_RS10340	SM00490	helicase superfamily c-terminal domain
ABC04_RS10355	SM00869	Autotransporter beta-domain
ABC04_RS10385	SM00882	Coenzyme A transferase
ABC04_RS10390	SM00882	Coenzyme A transferase
ABC04_RS10445	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS10445	SM00464	Found in ATP-dependent protease La (LON)
ABC04_RS10450	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS10450	SM00994	ClpX C4-type zinc finger
ABC04_RS10450	SM01086	C-terminal, D2-small domain, of ClpB protein
ABC04_RS10480	SM00357	Cold shock protein domain
ABC04_RS10495	SM00869	Autotransporter beta-domain
ABC04_RS10530	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS10535	SM00965	Secretin and TonB N terminus short domain
ABC04_RS10565	SM00904	Riboflavin kinase
ABC04_RS10590	SM00344	helix_turn_helix ASNC type
ABC04_RS10655	SM00749	bacterial OsmY and nodulation domain
ABC04_RS10705	SM00422	helix_turn_helix, mercury resistance
ABC04_RS10730	SM00257	Lysin motif
ABC04_RS10745	SM01207	ABC04_RS10745
ABC04_RS10790	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABC04_RS10830	SM00869	Autotransporter beta-domain
ABC04_RS10840	SM00155	Phospholipase D. Active site motifs.
ABC04_RS10855	SM01005	Alanine racemase, C-terminal domain
ABC04_RS10865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS10865	SM00331	Sigma factor PP2C-like phosphatases
ABC04_RS10865	SM01049	ABC04_RS10865
ABC04_RS10940	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS11055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABC04_RS11055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS11100	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS11115	SM00450	Rhodanese Homology Domain
ABC04_RS11130	SM00829	Enoylreductase
ABC04_RS11145	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABC04_RS11165	SM01329	ABC04_RS11165
ABC04_RS11170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS11190	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS11255	SM01209	ABC04_RS11255
ABC04_RS11255	SM01210	ABC04_RS11255
ABC04_RS11285	SM00869	Autotransporter beta-domain
ABC04_RS11325	SM00316	Ribosomal protein S1-like RNA-binding domain
ABC04_RS11345	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS11400	SM00481	DNA polymerase alpha chain like domain
ABC04_RS11410	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS11410	SM00487	DEAD-like helicases superfamily
ABC04_RS11410	SM00490	helicase superfamily c-terminal domain
ABC04_RS11410	SM00847	Helicase associated domain (HA2)  Add an annotation
ABC04_RS11475	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS11560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS11560	SM00866	ABC04_RS11560
ABC04_RS11600	SM00981	ABC04_RS11600
ABC04_RS11655	SM00028	Tetratricopeptide repeats
ABC04_RS11655	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS11665	SM01192	ABC04_RS11665
ABC04_RS11665	SM01193	ABC04_RS11665
ABC04_RS11720	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS11735	SM00882	Coenzyme A transferase
ABC04_RS11895	SM00358	Double-stranded RNA binding motif
ABC04_RS11895	SM00535	Ribonuclease III family
ABC04_RS11905	SM00838	Elongation factor G C-terminus
ABC04_RS11910	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ABC04_RS11935	SM00825	Beta-ketoacyl synthase
ABC04_RS11945	SM00822	ABC04_RS11945
ABC04_RS11950	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
ABC04_RS11985	SM00644	ABC04_RS11985
ABC04_RS12045	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ABC04_RS12050	SM01329	ABC04_RS12050
ABC04_RS12070	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS12105	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
ABC04_RS12145	SM00852	Probable molybdopterin binding domain
ABC04_RS12165	SM00052	Putative diguanylate phosphodiesterase
ABC04_RS12185	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS12195	SM00855	Phosphoglycerate mutase family
ABC04_RS12205	SM00851	MGS-like domain
ABC04_RS12205	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ABC04_RS12210	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
ABC04_RS12275	SM00267	diguanylate cyclase
ABC04_RS12280	SM00244	prohibitin homologues
ABC04_RS12340	SM00935	Outer membrane protein (OmpH-like)
ABC04_RS12350	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ABC04_RS12395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABC04_RS12490	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS12555	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
ABC04_RS12555	SM00091	PAS domain
ABC04_RS12555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABC04_RS12555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS12560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABC04_RS12560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS12565	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
ABC04_RS12565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS12580	SM00047	Lysozyme subfamily 2
ABC04_RS12625	SM00858	ABC04_RS12625
ABC04_RS12640	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS12640	SM00962	SRP54-type protein, GTPase domain
ABC04_RS12660	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS12670	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS12685	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
ABC04_RS12705	SM00354	helix_turn _helix lactose operon repressor
ABC04_RS12730	SM00881	CoA binding domain
ABC04_RS12735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS12735	SM00895	ABC04_RS12735
ABC04_RS12760	SM00869	Autotransporter beta-domain
ABC04_RS12785	SM00155	Phospholipase D. Active site motifs.
ABC04_RS12830	SM00642	Alpha-amylase domain
ABC04_RS12835	SM00642	Alpha-amylase domain
ABC04_RS12840	SM00642	Alpha-amylase domain
ABC04_RS12845	SM00642	Alpha-amylase domain
ABC04_RS12850	SM00642	Alpha-amylase domain
ABC04_RS12860	SM00642	Alpha-amylase domain
ABC04_RS12880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS13010	SM00953	ABC04_RS13010
ABC04_RS13045	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13095	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13100	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13135	SM00434	DNA Topoisomerase IV
ABC04_RS13145	SM00387	Histidine kinase-like ATPases
ABC04_RS13145	SM00433	TopoisomeraseII
ABC04_RS13155	SM00357	Cold shock protein domain
ABC04_RS13155	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13155	SM00959	Rho termination factor, N-terminal domain
ABC04_RS13195	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
ABC04_RS13195	SM00474	3'-5' exonuclease
ABC04_RS13195	SM00475	5'-3' exonuclease
ABC04_RS13195	SM00482	DNA polymerase A domain
ABC04_RS13235	SM00316	Ribosomal protein S1-like RNA-binding domain
ABC04_RS13245	SM00363	S4 RNA-binding domain
ABC04_RS13270	SM00833	Cobalamin synthesis protein cobW C-terminal domain
ABC04_RS13345	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13350	SM00327	von Willebrand factor (vWF) type A domain
ABC04_RS13375	SM01005	Alanine racemase, C-terminal domain
ABC04_RS13410	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13475	SM00869	Autotransporter beta-domain
ABC04_RS13480	SM00869	Autotransporter beta-domain
ABC04_RS13495	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13495	SM01086	C-terminal, D2-small domain, of ClpB protein
ABC04_RS13500	SM00100	Cyclic nucleotide-monophosphate binding domain
ABC04_RS13500	SM00419	helix_turn_helix, cAMP Regulatory protein
ABC04_RS13570	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS13585	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13675	SM00479	ABC04_RS13675
ABC04_RS13735	SM00938	Nitrogen regulatory protein P-II
ABC04_RS13770	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABC04_RS13775	SM00852	Probable molybdopterin binding domain
ABC04_RS13780	SM00852	Probable molybdopterin binding domain
ABC04_RS13830	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABC04_RS13830	SM00876	Biotin and Thiamin Synthesis associated domain
ABC04_RS13855	SM00422	helix_turn_helix, mercury resistance
ABC04_RS13920	SM00938	Nitrogen regulatory protein P-II
ABC04_RS13930	SM00869	Autotransporter beta-domain
ABC04_RS13950	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS13955	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS14000	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS14000	SM01086	C-terminal, D2-small domain, of ClpB protein
ABC04_RS14010	SM01359	ABC04_RS14010
ABC04_RS14010	SM01360	ABC04_RS14010
ABC04_RS14020	SM00357	Cold shock protein domain
ABC04_RS14085	SM00822	ABC04_RS14085
ABC04_RS14170	SM00670	Large family of predicted nucleotide-binding domains
ABC04_RS14185	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS14220	SM00861	Transketolase, pyrimidine binding domain
ABC04_RS14235	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS14260	SM00116	Domain in cystathionine beta-synthase and other proteins.
ABC04_RS14260	SM00924	MgtE intracellular N domain
ABC04_RS14315	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS14315	SM00930	ABC04_RS14315
ABC04_RS14370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS14370	SM00895	ABC04_RS14370
ABC04_RS14405	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS14435	SM00422	helix_turn_helix, mercury resistance
ABC04_RS14460	SM00822	ABC04_RS14460
ABC04_RS14545	SM00822	ABC04_RS14545
ABC04_RS14570	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABC04_RS14595	SM00829	Enoylreductase
ABC04_RS14610	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS14635	SM00344	helix_turn_helix ASNC type
ABC04_RS14680	SM00248	ankyrin repeats
ABC04_RS14705	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS14740	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS14755	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS14795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS14795	SM00895	ABC04_RS14795
ABC04_RS14865	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
ABC04_RS14865	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
ABC04_RS14885	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS14920	SM00912	haemagglutination activity domain
ABC04_RS14940	SM00528	Domain in histone-like proteins of HNS family
ABC04_RS14980	SM00257	Lysin motif
ABC04_RS15030	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
ABC04_RS15055	SM00448	cheY-homologous receiver domain
ABC04_RS15060	SM00387	Histidine kinase-like ATPases
ABC04_RS15155	SM00363	S4 RNA-binding domain
ABC04_RS15185	SM00859	Semialdehyde dehydrogenase, NAD binding domain
ABC04_RS15225	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS15245	SM00487	DEAD-like helicases superfamily
ABC04_RS15245	SM00490	helicase superfamily c-terminal domain
ABC04_RS15255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS15255	SM00895	ABC04_RS15255
ABC04_RS15290	SM00344	helix_turn_helix ASNC type
ABC04_RS15370	SM00878	Biotin carboxylase C-terminal domain
ABC04_RS15400	SM00955	ABC04_RS15400
ABC04_RS15430	SM00344	helix_turn_helix ASNC type
ABC04_RS15460	SM00957	SecA DEAD-like domain
ABC04_RS15460	SM00958	SecA preprotein cross-linking domain
ABC04_RS15480	SM00864	Tubulin/FtsZ family, GTPase domain
ABC04_RS15480	SM00865	Tubulin/FtsZ family, C-terminal domain
ABC04_RS15485	SM00842	Cell division protein FtsA
ABC04_RS15555	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS15570	SM00151	SWI complex, BAF60b domains
ABC04_RS15605	SM00344	helix_turn_helix ASNC type
ABC04_RS15715	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS15715	SM01086	C-terminal, D2-small domain, of ClpB protein
ABC04_RS15730	SM00833	Cobalamin synthesis protein cobW C-terminal domain
ABC04_RS15745	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS15815	SM00996	S-adenosyl-L-homocysteine hydrolase
ABC04_RS15815	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
ABC04_RS15875	SM00986	Uracil DNA glycosylase superfamily
ABC04_RS15875	SM00987	UreE urease accessory protein, C-terminal domain 
ABC04_RS15895	SM00155	Phospholipase D. Active site motifs.
ABC04_RS15900	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS15945	SM00344	helix_turn_helix ASNC type
ABC04_RS15945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS15990	SM00422	helix_turn_helix, mercury resistance
ABC04_RS15990	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS16035	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS16045	SM00869	Autotransporter beta-domain
ABC04_RS16150	SM01400	ABC04_RS16150
ABC04_RS16170	SM00028	Tetratricopeptide repeats
ABC04_RS16175	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
ABC04_RS16175	SM01232	ABC04_RS16175
ABC04_RS16180	SM00849	Metallo-beta-lactamase superfamily
ABC04_RS16215	SM00387	Histidine kinase-like ATPases
ABC04_RS16215	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS16220	SM00448	cheY-homologous receiver domain
ABC04_RS16220	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS16280	SM00984	UDP binding domain
ABC04_RS16310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS16365	SM00988	UreE urease accessory protein, N-terminal domain
ABC04_RS16395	SM00422	helix_turn_helix, mercury resistance
ABC04_RS16415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS16415	SM00866	ABC04_RS16415
ABC04_RS16495	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS16500	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS16510	SM00822	ABC04_RS16510
ABC04_RS16595	SM00849	Metallo-beta-lactamase superfamily
ABC04_RS16600	SM00257	Lysin motif
ABC04_RS16640	SM00448	cheY-homologous receiver domain
ABC04_RS16640	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS16645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS16645	SM00387	Histidine kinase-like ATPases
ABC04_RS16735	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS16770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS16770	SM00866	ABC04_RS16770
ABC04_RS16795	SM00903	Flavin reductase like domain
ABC04_RS16870	SM00925	MltA specific insert domain
ABC04_RS16900	SM00905	Dihydroneopterin aldolase
ABC04_RS16910	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ABC04_RS16970	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS16990	SM00487	DEAD-like helicases superfamily
ABC04_RS16990	SM00490	helicase superfamily c-terminal domain
ABC04_RS17015	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS17130	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS17170	SM00155	Phospholipase D. Active site motifs.
ABC04_RS17190	SM00834	Putative regulatory protein
ABC04_RS17220	SM00116	Domain in cystathionine beta-synthase and other proteins.
ABC04_RS17240	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS17295	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
ABC04_RS17300	SM01092	CO dehydrogenase flavoprotein C-terminal domain
ABC04_RS17330	SM00937	ABC04_RS17330
ABC04_RS17365	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS17375	SM00881	CoA binding domain
ABC04_RS17400	SM00344	helix_turn_helix ASNC type
ABC04_RS17430	SM00881	CoA binding domain
ABC04_RS17440	SM00829	Enoylreductase
ABC04_RS17515	SM01130	ABC04_RS17515
ABC04_RS17575	SM00881	CoA binding domain
ABC04_RS17580	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS17590	SM00861	Transketolase, pyrimidine binding domain
ABC04_RS17630	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS17635	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS17665	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS17690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
ABC04_RS17690	SM00245	tail specific protease
ABC04_RS17700	SM00855	Phosphoglycerate mutase family
ABC04_RS17705	SM00450	Rhodanese Homology Domain
ABC04_RS17765	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS17785	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
ABC04_RS17850	SM00347	helix_turn_helix multiple antibiotic resistance protein
ABC04_RS17865	SM00448	cheY-homologous receiver domain
ABC04_RS17870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
ABC04_RS17870	SM00387	Histidine kinase-like ATPases
ABC04_RS17870	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS17945	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS17965	SM00344	helix_turn_helix ASNC type
ABC04_RS18020	SM00729	Elongator protein 3, MiaB family, Radical SAM
ABC04_RS18040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS18040	SM00895	ABC04_RS18040
ABC04_RS18085	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS18105	SM00869	Autotransporter beta-domain
ABC04_RS18135	SM01119	ABC04_RS18135
ABC04_RS18145	SM00244	prohibitin homologues
ABC04_RS18240	SM00387	Histidine kinase-like ATPases
ABC04_RS18240	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS18275	SM01234	ABC04_RS18275
ABC04_RS18290	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS18290	SM00760	Bacterial dnaA protein helix-turn-helix domain
ABC04_RS18295	SM00480	DNA polymerase III beta subunit
ABC04_RS18300	SM00387	Histidine kinase-like ATPases
ABC04_RS18300	SM00433	TopoisomeraseII
ABC04_RS18305	SM00346	helix_turn_helix isocitrate lyase regulation
ABC04_RS18330	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS18330	SM00871	Bacterial transcription activator, effector binding domain
ABC04_RS18350	SM00422	helix_turn_helix, mercury resistance
ABC04_RS18355	SM00849	Metallo-beta-lactamase superfamily
ABC04_RS18385	SM00878	Biotin carboxylase C-terminal domain
ABC04_RS18385	SM01209	ABC04_RS18385
ABC04_RS18405	SM01119	ABC04_RS18405
ABC04_RS18440	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
ABC04_RS18440	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
ABC04_RS18440	SM00493	ABC04_RS18440
ABC04_RS18450	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS18480	SM00344	helix_turn_helix ASNC type
ABC04_RS18490	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
ABC04_RS18510	SM01018	B12 binding domain
ABC04_RS18590	SM00838	Elongation factor G C-terminus
ABC04_RS18590	SM00889	Elongation factor G, domain IV
ABC04_RS18600	SM01403	ABC04_RS18600
ABC04_RS18620	SM01382	ABC04_RS18620
ABC04_RS18620	SM01383	ABC04_RS18620
ABC04_RS18635	SM00322	K homology RNA-binding domain
ABC04_RS18670	SM01374	ABC04_RS18670
ABC04_RS18745	SM00363	S4 RNA-binding domain
ABC04_RS18745	SM01390	ABC04_RS18745
ABC04_RS18750	SM00662	RNA polymerases D
ABC04_RS18780	SM01004	Delta-aminolevulinic acid dehydratase
ABC04_RS18815	SM01219	ABC04_RS18815
ABC04_RS18835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
ABC04_RS18885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS18885	SM00866	ABC04_RS18885
ABC04_RS18930	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS18955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS18955	SM00895	ABC04_RS18955
ABC04_RS18985	SM01130	ABC04_RS18985
ABC04_RS19000	SM00257	Lysin motif
ABC04_RS19055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS19065	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS19070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
ABC04_RS19085	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS19100	SM00829	Enoylreductase
ABC04_RS19150	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS19200	SM00984	UDP binding domain
ABC04_RS19290	SM00100	Cyclic nucleotide-monophosphate binding domain
ABC04_RS19315	SM00829	Enoylreductase
ABC04_RS19345	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS19455	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS19545	SM00342	helix_turn_helix, arabinose operon control protein
ABC04_RS19660	SM00421	helix_turn_helix, Lux Regulon
ABC04_RS19700	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS19715	SM00062	Bacterial periplasmic substrate-binding proteins
ABC04_RS19720	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS19740	SM00478	endonuclease III
ABC04_RS19745	SM00530	Helix-turn-helix XRE-family like proteins 
ABC04_RS19820	SM01060	ABC04_RS19820
ABC04_RS19830	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS19850	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS19855	SM00382	ATPases associated with a variety of cellular activities
ABC04_RS19885	SM00448	cheY-homologous receiver domain
ABC04_RS19885	SM00862	Transcriptional regulatory protein, C terminal
ABC04_RS19890	SM00387	Histidine kinase-like ATPases
ABC04_RS19890	SM00388	His Kinase A (phosphoacceptor) domain
ABC04_RS19915	SM00357	Cold shock protein domain
