locus-tag class description AVS56_RS00005 PF13932 GidA associated domain AVS56_RS00005 PF01134 Glucose inhibited division protein A AVS56_RS00010 PF02527 rRNA small subunit methyltransferase G AVS56_RS00015 PF13614 AAA domain AVS56_RS00025 PF02195 ParB-like nuclease domain AVS56_RS00025 PF17762 HTH domain found in ParB protein AVS56_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain AVS56_RS00030 PF00710 Asparaginase, N-terminal AVS56_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain AVS56_RS00035 PF00710 Asparaginase, N-terminal AVS56_RS00055 PF03144 Elongation factor Tu domain 2 AVS56_RS00055 PF03143 Elongation factor Tu C-terminal domain AVS56_RS00055 PF00009 Elongation factor Tu GTP binding domain AVS56_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVS56_RS00070 PF00467 KOW motif AVS56_RS00070 PF02357 Transcription termination factor nusG AVS56_RS00075 PF03946 Ribosomal protein L11, N-terminal domain AVS56_RS00075 PF00298 Ribosomal protein L11, RNA binding domain AVS56_RS00080 PF00687 Ribosomal protein L1p/L10e family AVS56_RS00085 PF00466 Ribosomal protein L10 AVS56_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain AVS56_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain AVS56_RS00095 PF04561 RNA polymerase Rpb2, domain 2 AVS56_RS00095 PF04565 RNA polymerase Rpb2, domain 3 AVS56_RS00095 PF04563 RNA polymerase beta subunit AVS56_RS00095 PF04560 RNA polymerase Rpb2, domain 7 AVS56_RS00095 PF00562 RNA polymerase Rpb2, domain 6 AVS56_RS00095 PF10385 RNA polymerase beta subunit external 1 domain AVS56_RS00100 PF04998 RNA polymerase Rpb1, domain 5 AVS56_RS00100 PF04983 RNA polymerase Rpb1, domain 3 AVS56_RS00100 PF00623 RNA polymerase Rpb1, domain 2 AVS56_RS00100 PF04997 RNA polymerase Rpb1, domain 1 AVS56_RS00100 PF05000 RNA polymerase Rpb1, domain 4 AVS56_RS00130 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS00130 PF00072 Response regulator receiver domain AVS56_RS00140 PF02515 CoA-transferase family III AVS56_RS00155 PF01575 MaoC like domain AVS56_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS00160 PF03466 LysR substrate binding domain AVS56_RS00165 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit AVS56_RS00190 PF05746 DALR anticodon binding domain AVS56_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit AVS56_RS00200 PF01553 Acyltransferase AVS56_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS56_RS00215 PF01327 Polypeptide deformylase AVS56_RS00250 PF02615 Malate/L-lactate dehydrogenase AVS56_RS00255 PF00561 alpha/beta hydrolase fold AVS56_RS00260 PF00561 alpha/beta hydrolase fold AVS56_RS00260 PF07021 Methionine biosynthesis protein MetW AVS56_RS00275 PF07690 Major Facilitator Superfamily AVS56_RS00285 PF01177 Asp/Glu/Hydantoin racemase AVS56_RS00290 PF00005 ABC transporter AVS56_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS00340 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS00355 PF00970 Oxidoreductase FAD-binding domain AVS56_RS00355 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS00355 PF00175 Oxidoreductase NAD-binding domain AVS56_RS00360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS00370 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS00400 PF00183 Hsp90 protein AVS56_RS00405 PF00043 Glutathione S-transferase, C-terminal domain AVS56_RS00405 PF13417 Glutathione S-transferase, N-terminal domain AVS56_RS00410 PF01510 N-acetylmuramoyl-L-alanine amidase AVS56_RS00420 PF01578 Cytochrome C assembly protein AVS56_RS00425 PF02978 Signal peptide binding domain AVS56_RS00425 PF02881 SRP54-type protein, helical bundle domain AVS56_RS00425 PF00448 SRP54-type protein, GTPase domain AVS56_RS00440 PF02719 Polysaccharide biosynthesis protein AVS56_RS00450 PF10997 Alternate to MurJ AVS56_RS00455 PF00862 Sucrose synthase AVS56_RS00455 PF00534 Glycosyl transferases group 1 AVS56_RS00460 PF02397 Bacterial sugar transferase AVS56_RS00465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVS56_RS00475 PF02350 UDP-N-acetylglucosamine 2-epimerase AVS56_RS00480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVS56_RS00485 PF00132 Bacterial transferase hexapeptide (six repeats) AVS56_RS00490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVS56_RS00490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVS56_RS00495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS56_RS00500 PF00534 Glycosyl transferases group 1 AVS56_RS00500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVS56_RS00510 PF03309 Type III pantothenate kinase AVS56_RS00520 PF02405 Permease MlaE AVS56_RS00525 PF00005 ABC transporter AVS56_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase AVS56_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain AVS56_RS00550 PF01063 Amino-transferase class IV AVS56_RS00555 PF04359 Protein of unknown function (DUF493) AVS56_RS00560 PF03099 Biotin/lipoate A/B protein ligase family AVS56_RS00565 PF04055 Radical SAM superfamily AVS56_RS00565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVS56_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVS56_RS00575 PF04321 RmlD substrate binding domain AVS56_RS00580 PF16363 GDP-mannose 4,6 dehydratase AVS56_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS56_RS00600 PF00085 Thioredoxin AVS56_RS00600 PF01323 DSBA-like thioredoxin domain AVS56_RS00610 PF05746 DALR anticodon binding domain AVS56_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain AVS56_RS00610 PF00750 tRNA synthetases class I (R) AVS56_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS00640 PF13416 Bacterial extracellular solute-binding protein AVS56_RS00645 PF17912 MalK OB fold domain AVS56_RS00645 PF00005 ABC transporter AVS56_RS00650 PF00149 Calcineurin-like phosphoesterase AVS56_RS00660 PF00005 ABC transporter AVS56_RS00660 PF12857 TOBE-like domain AVS56_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS00680 PF00356 Bacterial regulatory proteins, lacI family AVS56_RS00690 PF01425 Amidase AVS56_RS00695 PF08502 LeuA allosteric (dimerisation) domain AVS56_RS00695 PF00682 HMGL-like AVS56_RS00705 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVS56_RS00705 PF04963 Sigma-54 factor, core binding domain AVS56_RS00705 PF04552 Sigma-54, DNA binding domain AVS56_RS00715 PF03466 LysR substrate binding domain AVS56_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS00730 PF13609 Gram-negative porin AVS56_RS00735 PF00585 C-terminal regulatory domain of Threonine dehydratase AVS56_RS00735 PF00291 Pyridoxal-phosphate dependent enzyme AVS56_RS00750 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS00750 PF07729 FCD domain AVS56_RS00755 PF02515 CoA-transferase family III AVS56_RS00765 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS00775 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS00785 PF03746 LamB/YcsF family AVS56_RS00790 PF02626 Carboxyltransferase domain, subdomain A and B AVS56_RS00795 PF02682 Carboxyltransferase domain, subdomain C and D AVS56_RS00805 PF03466 LysR substrate binding domain AVS56_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS00810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS56_RS00810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS56_RS00810 PF01842 ACT domain AVS56_RS00820 PF00672 HAMP domain AVS56_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS00820 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS00825 PF00072 Response regulator receiver domain AVS56_RS00825 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS00830 PF00989 PAS fold AVS56_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS00830 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS00830 PF11808 Phosphate regulon sensor protein PhoR AVS56_RS00835 PF00072 Response regulator receiver domain AVS56_RS00835 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS00840 PF01209 ubiE/COQ5 methyltransferase family AVS56_RS00855 PF03109 ABC1 family AVS56_RS00870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS00870 PF00005 ABC transporter AVS56_RS00875 PF04536 TPM domain AVS56_RS00885 PF00271 Helicase conserved C-terminal domain AVS56_RS00885 PF00270 DEAD/DEAH box helicase AVS56_RS00890 PF01810 LysE type translocator AVS56_RS00895 PF16658 Class II release factor RF3, C-terminal domain AVS56_RS00895 PF00009 Elongation factor Tu GTP binding domain AVS56_RS00895 PF03144 Elongation factor Tu domain 2 AVS56_RS00905 PF00210 Ferritin-like domain AVS56_RS00930 PF17773 UPF0176 acylphosphatase like domain AVS56_RS00930 PF00581 Rhodanese-like domain AVS56_RS00935 PF01588 Putative tRNA binding domain AVS56_RS00935 PF09334 tRNA synthetases class I (M) AVS56_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase AVS56_RS00960 PF00692 dUTPase AVS56_RS00985 PF01276 Orn/Lys/Arg decarboxylase, major domain AVS56_RS00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AVS56_RS00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AVS56_RS01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVS56_RS01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVS56_RS01005 PF02535 ZIP Zinc transporter AVS56_RS01010 PF01571 Aminomethyltransferase folate-binding domain AVS56_RS01010 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVS56_RS01015 PF01597 Glycine cleavage H-protein AVS56_RS01020 PF02347 Glycine cleavage system P-protein AVS56_RS01025 PF07729 FCD domain AVS56_RS01025 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS01030 PF02515 CoA-transferase family III AVS56_RS01040 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS01060 PF12146 Serine aminopeptidase, S33 AVS56_RS01070 PF02426 Muconolactone delta-isomerase AVS56_RS01075 PF01144 Coenzyme A transferase AVS56_RS01080 PF01144 Coenzyme A transferase AVS56_RS01085 PF01614 Bacterial transcriptional regulator AVS56_RS01085 PF09339 IclR helix-turn-helix domain AVS56_RS01095 PF02667 Short chain fatty acid transporter AVS56_RS01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS56_RS01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS56_RS01105 PF00082 Subtilase family AVS56_RS01105 PF03797 Autotransporter beta-domain AVS56_RS01110 PF00311 Phosphoenolpyruvate carboxylase AVS56_RS01115 PF06508 Queuosine biosynthesis protein QueC AVS56_RS01145 PF01565 FAD binding domain AVS56_RS01145 PF02913 FAD linked oxidases, C-terminal domain AVS56_RS01150 PF00171 Aldehyde dehydrogenase family AVS56_RS01155 PF01964 Radical SAM ThiC family AVS56_RS01155 PF13667 ThiC-associated domain AVS56_RS01160 PF07549 SecD/SecF GG Motif AVS56_RS01160 PF02355 Protein export membrane protein AVS56_RS01165 PF09518 HindIII restriction endonuclease AVS56_RS01195 PF02627 Carboxymuconolactone decarboxylase family AVS56_RS01200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS56_RS01200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS56_RS01205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS56_RS01205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS56_RS01210 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS01210 PF07702 UTRA domain AVS56_RS01215 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS01220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS01230 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS01235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVS56_RS01240 PF01743 Poly A polymerase head domain AVS56_RS01240 PF12626 Polymerase A arginine-rich C-terminus AVS56_RS01240 PF12627 Probable RNA and SrmB- binding site of polymerase A AVS56_RS01250 PF00308 Bacterial dnaA protein AVS56_RS01255 PF02769 AIR synthase related protein, C-terminal domain AVS56_RS01255 PF00586 AIR synthase related protein, N-terminal domain AVS56_RS01265 PF08676 MutL C terminal dimerisation domain AVS56_RS01265 PF01119 DNA mismatch repair protein, C-terminal domain AVS56_RS01270 PF09335 SNARE associated Golgi protein AVS56_RS01275 PF01520 N-acetylmuramoyl-L-alanine amidase AVS56_RS01275 PF11741 AMIN domain AVS56_RS01280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AVS56_RS01285 PF10415 Fumarase C C-terminus AVS56_RS01285 PF00206 Lyase AVS56_RS01295 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS01300 PF03466 LysR substrate binding domain AVS56_RS01310 PF02515 CoA-transferase family III AVS56_RS01315 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS01320 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS01320 PF18158 Adaptive response protein AidB N-terminal domain AVS56_RS01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS01340 PF01654 Cytochrome bd terminal oxidase subunit I AVS56_RS01345 PF02322 Cytochrome bd terminal oxidase subunit II AVS56_RS01350 PF08173 Membrane bound YbgT-like protein AVS56_RS01355 PF00664 ABC transporter transmembrane region AVS56_RS01355 PF00005 ABC transporter AVS56_RS01360 PF00664 ABC transporter transmembrane region AVS56_RS01360 PF00005 ABC transporter AVS56_RS01365 PF00156 Phosphoribosyl transferase domain AVS56_RS01380 PF13609 Gram-negative porin AVS56_RS01410 PF00043 Glutathione S-transferase, C-terminal domain AVS56_RS01410 PF02798 Glutathione S-transferase, N-terminal domain AVS56_RS01415 PF02167 Cytochrome C1 family AVS56_RS01420 PF00032 Cytochrome b(C-terminal)/b6/petD AVS56_RS01420 PF00033 Cytochrome b/b6/petB AVS56_RS01425 PF00355 Rieske [2Fe-2S] domain AVS56_RS01425 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVS56_RS01430 PF01741 Large-conductance mechanosensitive channel, MscL AVS56_RS01435 PF01784 NIF3 (NGG1p interacting factor 3) AVS56_RS01440 PF13180 PDZ domain AVS56_RS01450 PF04299 Putative FMN-binding domain AVS56_RS01455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS56_RS01460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS01465 PF07859 alpha/beta hydrolase fold AVS56_RS01475 PF08502 LeuA allosteric (dimerisation) domain AVS56_RS01475 PF00682 HMGL-like AVS56_RS01480 PF12833 Helix-turn-helix domain AVS56_RS01485 PF00920 Dehydratase family AVS56_RS01490 PF07690 Major Facilitator Superfamily AVS56_RS01495 PF03466 LysR substrate binding domain AVS56_RS01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS01505 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AVS56_RS01535 PF07859 alpha/beta hydrolase fold AVS56_RS01545 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS01550 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS01550 PF11862 Domain of unknown function (DUF3382) AVS56_RS01555 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS01555 PF00005 ABC transporter AVS56_RS01560 PF00005 ABC transporter AVS56_RS01575 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS01580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS01580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS01580 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS01585 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS01585 PF00501 AMP-binding enzyme AVS56_RS01605 PF00202 Aminotransferase class-III AVS56_RS01610 PF02581 Thiamine monophosphate synthase AVS56_RS01615 PF08543 Phosphomethylpyrimidine kinase AVS56_RS01620 PF00301 Rubredoxin AVS56_RS01625 PF02622 Uncharacterized ACR, COG1678 AVS56_RS01630 PF03652 Holliday junction resolvase AVS56_RS01635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS56_RS01635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS56_RS01640 PF01979 Amidohydrolase family AVS56_RS01645 PF01553 Acyltransferase AVS56_RS01650 PF00149 Calcineurin-like phosphoesterase AVS56_RS01660 PF00912 Transglycosylase AVS56_RS01675 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS01675 PF00501 AMP-binding enzyme AVS56_RS01680 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS01695 PF12706 Beta-lactamase superfamily domain AVS56_RS01700 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS01705 PF03466 LysR substrate binding domain AVS56_RS01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS01715 PF11737 Protein of unknown function (DUF3300) AVS56_RS01725 PF00563 EAL domain AVS56_RS01725 PF03707 Bacterial signalling protein N terminal repeat AVS56_RS01725 PF00990 Diguanylate cyclase, GGDEF domain AVS56_RS01730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVS56_RS01730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVS56_RS01735 PF13532 2OG-Fe(II) oxygenase superfamily AVS56_RS01740 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AVS56_RS01745 PF04463 Protein of unknown function (DUF523) AVS56_RS01750 PF00005 ABC transporter AVS56_RS01755 PF01032 FecCD transport family AVS56_RS01760 PF01497 Periplasmic binding protein AVS56_RS01765 PF05171 Haemin-degrading HemS.ChuX domain AVS56_RS01770 PF00593 TonB dependent receptor AVS56_RS01770 PF04886 PT repeat AVS56_RS01770 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS01775 PF16220 Domain of unknown function (DUF4880) AVS56_RS01775 PF04773 FecR protein AVS56_RS01780 PF04542 Sigma-70 region 2 AVS56_RS01780 PF08281 Sigma-70, region 4 AVS56_RS01805 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVS56_RS01815 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS01815 PF07729 FCD domain AVS56_RS01835 PF00171 Aldehyde dehydrogenase family AVS56_RS01845 PF00970 Oxidoreductase FAD-binding domain AVS56_RS01845 PF00175 Oxidoreductase NAD-binding domain AVS56_RS01845 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS01870 PF03458 UPF0126 domain AVS56_RS01875 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVS56_RS01875 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVS56_RS01880 PF03372 Endonuclease/Exonuclease/phosphatase family AVS56_RS01885 PF00156 Phosphoribosyl transferase domain AVS56_RS01890 PF02934 GatB/GatE catalytic domain AVS56_RS01890 PF02637 GatB domain AVS56_RS01895 PF01425 Amidase AVS56_RS01900 PF02686 Glu-tRNAGln amidotransferase C subunit AVS56_RS01910 PF04085 rod shape-determining protein MreC AVS56_RS01920 PF03717 Penicillin-binding Protein dimerisation domain AVS56_RS01920 PF00905 Penicillin binding protein transpeptidase domain AVS56_RS01925 PF01098 Cell cycle protein AVS56_RS01930 PF02615 Malate/L-lactate dehydrogenase AVS56_RS01935 PF00939 Sodium:sulfate symporter transmembrane region AVS56_RS01940 PF00440 Bacterial regulatory proteins, tetR family AVS56_RS01950 PF00696 Amino acid kinase family AVS56_RS01955 PF03180 NLPA lipoprotein AVS56_RS01960 PF00578 AhpC/TSA family AVS56_RS01965 PF04972 BON domain AVS56_RS01970 PF13580 SIS domain AVS56_RS01980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS56_RS01985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVS56_RS01985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVS56_RS02005 PF02515 CoA-transferase family III AVS56_RS02010 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS02015 PF02515 CoA-transferase family III AVS56_RS02030 PF09339 IclR helix-turn-helix domain AVS56_RS02035 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS02045 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS02050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS56_RS02050 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS02050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS56_RS02055 PF02515 CoA-transferase family III AVS56_RS02060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS02060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS02060 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS02065 PF03466 LysR substrate binding domain AVS56_RS02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS02075 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS02085 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS02095 PF00892 EamA-like transporter family AVS56_RS02100 PF01810 LysE type translocator AVS56_RS02105 PF12146 Serine aminopeptidase, S33 AVS56_RS02125 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVS56_RS02130 PF00535 Glycosyl transferase family 2 AVS56_RS02150 PF03616 Sodium/glutamate symporter AVS56_RS02160 PF02667 Short chain fatty acid transporter AVS56_RS02175 PF00929 Exonuclease AVS56_RS02180 PF00873 AcrB/AcrD/AcrF family AVS56_RS02190 PF03764 Elongation factor G, domain IV AVS56_RS02190 PF14492 Elongation Factor G, domain II AVS56_RS02190 PF03144 Elongation factor Tu domain 2 AVS56_RS02190 PF00679 Elongation factor G C-terminus AVS56_RS02190 PF00009 Elongation factor Tu GTP binding domain AVS56_RS02195 PF00582 Universal stress protein family AVS56_RS02205 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS02205 PF00155 Aminotransferase class I and II AVS56_RS02210 PF03144 Elongation factor Tu domain 2 AVS56_RS02210 PF00009 Elongation factor Tu GTP binding domain AVS56_RS02210 PF03764 Elongation factor G, domain IV AVS56_RS02210 PF00679 Elongation factor G C-terminus AVS56_RS02210 PF14492 Elongation Factor G, domain II AVS56_RS02215 PF02308 MgtC family AVS56_RS02220 PF03471 Transporter associated domain AVS56_RS02220 PF03741 Integral membrane protein TerC family AVS56_RS02225 PF02515 CoA-transferase family III AVS56_RS02230 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS02235 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS02240 PF03466 LysR substrate binding domain AVS56_RS02240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS02245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS02245 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS02245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS02255 PF02803 Thiolase, C-terminal domain AVS56_RS02255 PF00108 Thiolase, N-terminal domain AVS56_RS02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS02275 PF03466 LysR substrate binding domain AVS56_RS02280 PF00313 'Cold-shock' DNA-binding domain AVS56_RS02290 PF07729 FCD domain AVS56_RS02290 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS02295 PF00171 Aldehyde dehydrogenase family AVS56_RS02300 PF02667 Short chain fatty acid transporter AVS56_RS02305 PF00042 Globin AVS56_RS02305 PF00175 Oxidoreductase NAD-binding domain AVS56_RS02305 PF00970 Oxidoreductase FAD-binding domain AVS56_RS02310 PF01042 Endoribonuclease L-PSP AVS56_RS02315 PF03466 LysR substrate binding domain AVS56_RS02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS02325 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS02330 PF02515 CoA-transferase family III AVS56_RS02340 PF03466 LysR substrate binding domain AVS56_RS02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS02345 PF02515 CoA-transferase family III AVS56_RS02355 PF01794 Ferric reductase like transmembrane component AVS56_RS02360 PF00174 Oxidoreductase molybdopterin binding domain AVS56_RS02365 PF13419 Haloacid dehalogenase-like hydrolase AVS56_RS02370 PF01479 S4 domain AVS56_RS02370 PF00849 RNA pseudouridylate synthase AVS56_RS02375 PF12111 Polyribonucleotide phosphorylase C terminal AVS56_RS02375 PF10150 Ribonuclease E/G family AVS56_RS02375 PF00575 S1 RNA binding domain AVS56_RS02390 PF09411 Lipid A 3-O-deacylase (PagL) AVS56_RS02395 PF01039 Carboxyl transferase domain AVS56_RS02395 PF17848 Acetyl-coA carboxylase zinc finger domain AVS56_RS02400 PF00290 Tryptophan synthase alpha chain AVS56_RS02405 PF00291 Pyridoxal-phosphate dependent enzyme AVS56_RS02410 PF01546 Peptidase family M20/M25/M40 AVS56_RS02410 PF07687 Peptidase dimerisation domain AVS56_RS02415 PF02824 TGS domain AVS56_RS02415 PF13291 ACT domain AVS56_RS02415 PF04607 Region found in RelA / SpoT proteins AVS56_RS02420 PF06167 Glucose-regulated metallo-peptidase M90 AVS56_RS02430 PF01042 Endoribonuclease L-PSP AVS56_RS02435 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AVS56_RS02435 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVS56_RS02440 PF00037 4Fe-4S binding domain AVS56_RS02440 PF11953 Domain of unknown function (DUF3470) AVS56_RS02445 PF00970 Oxidoreductase FAD-binding domain AVS56_RS02445 PF00175 Oxidoreductase NAD-binding domain AVS56_RS02455 PF04060 Putative Fe-S cluster AVS56_RS02460 PF00633 Helix-hairpin-helix motif AVS56_RS02460 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS56_RS02460 PF10576 Iron-sulfur binding domain of endonuclease III AVS56_RS02465 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS02465 PF00005 ABC transporter AVS56_RS02470 PF00005 ABC transporter AVS56_RS02480 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS02495 PF01063 Amino-transferase class IV AVS56_RS02500 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS02500 PF00005 ABC transporter AVS56_RS02515 PF02632 BioY family AVS56_RS02520 PF02361 Cobalt transport protein AVS56_RS02525 PF00005 ABC transporter AVS56_RS02530 PF01641 SelR domain AVS56_RS02535 PF04279 Intracellular septation protein A AVS56_RS02550 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVS56_RS02550 PF01653 NAD-dependent DNA ligase adenylation domain AVS56_RS02550 PF00533 BRCA1 C Terminus (BRCT) domain AVS56_RS02550 PF12826 Helix-hairpin-helix motif AVS56_RS02550 PF03120 NAD-dependent DNA ligase OB-fold domain AVS56_RS02560 PF02463 RecF/RecN/SMC N terminal domain AVS56_RS02560 PF06470 SMC proteins Flexible Hinge Domain AVS56_RS02565 PF07690 Major Facilitator Superfamily AVS56_RS02570 PF03167 Uracil DNA glycosylase superfamily AVS56_RS02575 PF00814 Glycoprotease family AVS56_RS02580 PF00072 Response regulator receiver domain AVS56_RS02580 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS02595 PF00672 HAMP domain AVS56_RS02595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS02595 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS02600 PF00578 AhpC/TSA family AVS56_RS02605 PF02627 Carboxymuconolactone decarboxylase family AVS56_RS02615 PF07690 Major Facilitator Superfamily AVS56_RS02625 PF07729 FCD domain AVS56_RS02625 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS02640 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS02645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS56_RS02645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS56_RS02655 PF03466 LysR substrate binding domain AVS56_RS02655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS02665 PF00202 Aminotransferase class-III AVS56_RS02670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS56_RS02670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS56_RS02675 PF00764 Arginosuccinate synthase AVS56_RS02680 PF02705 K+ potassium transporter AVS56_RS02685 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS02685 PF08521 Two-component sensor kinase N-terminal AVS56_RS02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS02690 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS02690 PF00072 Response regulator receiver domain AVS56_RS02695 PF02472 Biopolymer transport protein ExbD/TolR AVS56_RS02700 PF01618 MotA/TolQ/ExbB proton channel family AVS56_RS02715 PF00216 Bacterial DNA-binding protein AVS56_RS02720 PF13640 2OG-Fe(II) oxygenase superfamily AVS56_RS02720 PF18331 PKHD-type hydroxylase C-terminal domain AVS56_RS02725 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS56_RS02730 PF00588 SpoU rRNA Methylase family AVS56_RS02730 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVS56_RS02735 PF17876 Cold shock domain AVS56_RS02735 PF00575 S1 RNA binding domain AVS56_RS02735 PF08461 Ribonuclease R winged-helix domain AVS56_RS02735 PF00773 RNB domain AVS56_RS02735 PF08206 Ribonuclease B OB domain AVS56_RS02755 PF13673 Acetyltransferase (GNAT) domain AVS56_RS02760 PF03547 Membrane transport protein AVS56_RS02765 PF04143 Sulphur transport AVS56_RS02770 PF01645 Conserved region in glutamate synthase AVS56_RS02785 PF13091 PLD-like domain AVS56_RS02785 PF13396 Phospholipase_D-nuclease N-terminal AVS56_RS02795 PF10017 Histidine-specific methyltransferase, SAM-dependent AVS56_RS02800 PF03781 Sulfatase-modifying factor enzyme 1 AVS56_RS02800 PF12867 DinB superfamily AVS56_RS02830 PF00072 Response regulator receiver domain AVS56_RS02835 PF00990 Diguanylate cyclase, GGDEF domain AVS56_RS02855 PF00890 FAD binding domain AVS56_RS02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS02860 PF03466 LysR substrate binding domain AVS56_RS02870 PF00890 FAD binding domain AVS56_RS02890 PF00166 Chaperonin 10 Kd subunit AVS56_RS02895 PF00118 TCP-1/cpn60 chaperonin family AVS56_RS02900 PF03797 Autotransporter beta-domain AVS56_RS02900 PF03212 Pertactin AVS56_RS02905 PF03631 Virulence factor BrkB AVS56_RS02910 PF01219 Prokaryotic diacylglycerol kinase AVS56_RS02915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS02920 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVS56_RS02925 PF18146 Damage-inducible protein CinA KH domain AVS56_RS02925 PF02464 Competence-damaged protein AVS56_RS02925 PF00994 Probable molybdopterin binding domain AVS56_RS02930 PF04608 Phosphatidylglycerophosphatase A AVS56_RS02935 PF00586 AIR synthase related protein, N-terminal domain AVS56_RS02935 PF02769 AIR synthase related protein, C-terminal domain AVS56_RS02940 PF01029 NusB family AVS56_RS02945 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVS56_RS02950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVS56_RS02950 PF00925 GTP cyclohydrolase II AVS56_RS02970 PF00005 ABC transporter AVS56_RS02980 PF00005 ABC transporter AVS56_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS02990 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS03005 PF02881 SRP54-type protein, helical bundle domain AVS56_RS03005 PF00448 SRP54-type protein, GTPase domain AVS56_RS03015 PF01467 Cytidylyltransferase-like AVS56_RS03020 PF00037 4Fe-4S binding domain AVS56_RS03025 PF03594 Benzoate membrane transport protein AVS56_RS03040 PF01022 Bacterial regulatory protein, arsR family AVS56_RS03055 PF03466 LysR substrate binding domain AVS56_RS03055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS03070 PF00005 ABC transporter AVS56_RS03070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS03075 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS03080 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS03090 PF01515 Phosphate acetyl/butaryl transferase AVS56_RS03090 PF03949 Malic enzyme, NAD binding domain AVS56_RS03090 PF00390 Malic enzyme, N-terminal domain AVS56_RS03095 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS56_RS03100 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS03105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS03105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS03105 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS03110 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS03110 PF07729 FCD domain AVS56_RS03150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS03150 PF03466 LysR substrate binding domain AVS56_RS03160 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVS56_RS03165 PF04377 Arginine-tRNA-protein transferase, C terminus AVS56_RS03165 PF04376 Arginine-tRNA-protein transferase, N terminus AVS56_RS03170 PF01180 Dihydroorotate dehydrogenase AVS56_RS03180 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS03185 PF05785 Rho-activating domain of cytotoxic necrotizing factor AVS56_RS03185 PF18807 Tripartite Tc toxins repeat AVS56_RS03190 PF09339 IclR helix-turn-helix domain AVS56_RS03190 PF01614 Bacterial transcriptional regulator AVS56_RS03195 PF02464 Competence-damaged protein AVS56_RS03195 PF00994 Probable molybdopterin binding domain AVS56_RS03195 PF18146 Damage-inducible protein CinA KH domain AVS56_RS03215 PF00271 Helicase conserved C-terminal domain AVS56_RS03215 PF00270 DEAD/DEAH box helicase AVS56_RS03230 PF01063 Amino-transferase class IV AVS56_RS03245 PF00561 alpha/beta hydrolase fold AVS56_RS03250 PF13181 Tetratricopeptide repeat AVS56_RS03250 PF01435 Peptidase family M48 AVS56_RS03255 PF00483 Nucleotidyl transferase AVS56_RS03265 PF13609 Gram-negative porin AVS56_RS03290 PF00557 Metallopeptidase family M24 AVS56_RS03290 PF05195 Aminopeptidase P, N-terminal domain AVS56_RS03300 PF01494 FAD binding domain AVS56_RS03305 PF01207 Dihydrouridine synthase (Dus) AVS56_RS03310 PF02954 Bacterial regulatory protein, Fis family AVS56_RS03315 PF01808 AICARFT/IMPCHase bienzyme AVS56_RS03315 PF02142 MGS-like domain AVS56_RS03320 PF02075 Crossover junction endodeoxyribonuclease RuvC AVS56_RS03325 PF07499 RuvA, C-terminal domain AVS56_RS03325 PF01330 RuvA N terminal domain AVS56_RS03330 PF01370 NAD dependent epimerase/dehydratase family AVS56_RS03335 PF00291 Pyridoxal-phosphate dependent enzyme AVS56_RS03340 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVS56_RS03340 PF17864 RuvB AAA lid domain AVS56_RS03340 PF05491 RuvB C-terminal winged helix domain AVS56_RS03345 PF00570 HRDC domain AVS56_RS03345 PF00270 DEAD/DEAH box helicase AVS56_RS03345 PF09382 RQC domain AVS56_RS03345 PF16124 RecQ zinc-binding AVS56_RS03345 PF00271 Helicase conserved C-terminal domain AVS56_RS03360 PF00484 Carbonic anhydrase AVS56_RS03365 PF01425 Amidase AVS56_RS03370 PF13458 Periplasmic binding protein AVS56_RS03375 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS03380 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS03385 PF00005 ABC transporter AVS56_RS03385 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS03390 PF00005 ABC transporter AVS56_RS03395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVS56_RS03395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVS56_RS03405 PF03180 NLPA lipoprotein AVS56_RS03550 PF06791 Prophage tail length tape measure protein AVS56_RS03620 PF02586 SOS response associated peptidase (SRAP) AVS56_RS03630 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS03630 PF00072 Response regulator receiver domain AVS56_RS03635 PF00293 NUDIX domain AVS56_RS03640 PF03129 Anticodon binding domain AVS56_RS03640 PF04073 Aminoacyl-tRNA editing domain AVS56_RS03640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS56_RS03645 PF03061 Thioesterase superfamily AVS56_RS03650 PF01618 MotA/TolQ/ExbB proton channel family AVS56_RS03655 PF02472 Biopolymer transport protein ExbD/TolR AVS56_RS03665 PF07676 WD40-like Beta Propeller Repeat AVS56_RS03665 PF04052 TolB amino-terminal domain AVS56_RS03670 PF00691 OmpA family AVS56_RS03680 PF01032 FecCD transport family AVS56_RS03685 PF00005 ABC transporter AVS56_RS03690 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS03695 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS03715 PF09317 Domain of unknown function (DUF1974) AVS56_RS03715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS03715 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS03715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS03720 PF07670 Nucleoside recognition AVS56_RS03725 PF02887 Pyruvate kinase, alpha/beta domain AVS56_RS03725 PF00224 Pyruvate kinase, barrel domain AVS56_RS03730 PF02595 Glycerate kinase family AVS56_RS03735 PF00398 Ribosomal RNA adenine dimethylase AVS56_RS03740 PF00639 PPIC-type PPIASE domain AVS56_RS03740 PF09312 SurA N-terminal domain AVS56_RS03745 PF04453 LPS transport system D AVS56_RS03750 PF01636 Phosphotransferase enzyme family AVS56_RS03755 PF00483 Nucleotidyl transferase AVS56_RS03765 PF01329 Pterin 4 alpha carbinolamine dehydratase AVS56_RS03770 PF04972 BON domain AVS56_RS03770 PF00691 OmpA family AVS56_RS03790 PF00202 Aminotransferase class-III AVS56_RS03795 PF01425 Amidase AVS56_RS03800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS03800 PF00005 ABC transporter AVS56_RS03805 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS03810 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS03815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS03835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVS56_RS03840 PF03435 Saccharopine dehydrogenase NADP binding domain AVS56_RS03840 PF16653 Saccharopine dehydrogenase C-terminal domain AVS56_RS03850 PF04264 YceI-like domain AVS56_RS03855 PF00593 TonB dependent receptor AVS56_RS03855 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS03860 PF04773 FecR protein AVS56_RS03860 PF16220 Domain of unknown function (DUF4880) AVS56_RS03900 PF00696 Amino acid kinase family AVS56_RS03900 PF01472 PUA domain AVS56_RS03905 PF01926 50S ribosome-binding GTPase AVS56_RS03905 PF01018 GTP1/OBG AVS56_RS03910 PF01016 Ribosomal L27 protein AVS56_RS03915 PF00829 Ribosomal prokaryotic L21 protein AVS56_RS03925 PF00348 Polyprenyl synthetase AVS56_RS03935 PF03466 LysR substrate binding domain AVS56_RS03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS03940 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS56_RS03940 PF01968 Hydantoinase/oxoprolinase AVS56_RS03945 PF02538 Hydantoinase B/oxoprolinase AVS56_RS03950 PF01266 FAD dependent oxidoreductase AVS56_RS03955 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS03960 PF00171 Aldehyde dehydrogenase family AVS56_RS03965 PF02794 RTX toxin acyltransferase family AVS56_RS03980 PF00005 ABC transporter AVS56_RS03980 PF03412 Peptidase C39 family AVS56_RS03980 PF00664 ABC transporter transmembrane region AVS56_RS03985 PF13533 Biotin-lipoyl like AVS56_RS03990 PF02321 Outer membrane efflux protein AVS56_RS03995 PF03466 LysR substrate binding domain AVS56_RS03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS04000 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS04005 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS04010 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS04015 PF00005 ABC transporter AVS56_RS04020 PF01063 Amino-transferase class IV AVS56_RS04040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS04040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS04040 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS04045 PF07729 FCD domain AVS56_RS04045 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS04055 PF07729 FCD domain AVS56_RS04055 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS04060 PF08240 Alcohol dehydrogenase GroES-like domain AVS56_RS04060 PF00107 Zinc-binding dehydrogenase AVS56_RS04065 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS04065 PF00501 AMP-binding enzyme AVS56_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS04080 PF00005 ABC transporter AVS56_RS04085 PF09084 NMT1/THI5 like AVS56_RS04095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS04095 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS04095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS04115 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVS56_RS04115 PF01433 Peptidase family M1 domain AVS56_RS04115 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVS56_RS04120 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AVS56_RS04130 PF02542 YgbB family AVS56_RS04135 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVS56_RS04140 PF02559 CarD-like/TRCF domain AVS56_RS04140 PF00271 Helicase conserved C-terminal domain AVS56_RS04140 PF03461 TRCF domain AVS56_RS04140 PF17757 UvrB interaction domain AVS56_RS04140 PF00270 DEAD/DEAH box helicase AVS56_RS04150 PF03466 LysR substrate binding domain AVS56_RS04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS04155 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS04160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS04160 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS04160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS04175 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS04175 PF00593 TonB dependent receptor AVS56_RS04180 PF00593 TonB dependent receptor AVS56_RS04180 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS04190 PF00361 Proton-conducting membrane transporter AVS56_RS04195 PF00361 Proton-conducting membrane transporter AVS56_RS04195 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVS56_RS04200 PF00361 Proton-conducting membrane transporter AVS56_RS04200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVS56_RS04205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVS56_RS04210 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVS56_RS04215 PF12838 4Fe-4S dicluster domain AVS56_RS04220 PF00146 NADH dehydrogenase AVS56_RS04225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVS56_RS04225 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVS56_RS04225 PF00384 Molybdopterin oxidoreductase AVS56_RS04230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVS56_RS04230 PF10531 SLBB domain AVS56_RS04230 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVS56_RS04240 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVS56_RS04245 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVS56_RS04250 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVS56_RS04255 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVS56_RS04260 PF13609 Gram-negative porin AVS56_RS04290 PF01569 PAP2 superfamily AVS56_RS04300 PF00781 Diacylglycerol kinase catalytic domain AVS56_RS04305 PF03466 LysR substrate binding domain AVS56_RS04305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS04310 PF02028 BCCT, betaine/carnitine/choline family transporter AVS56_RS04320 PF01638 HxlR-like helix-turn-helix AVS56_RS04325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS56_RS04330 PF00873 AcrB/AcrD/AcrF family AVS56_RS04335 PF02321 Outer membrane efflux protein AVS56_RS04345 PF00127 Copper binding proteins, plastocyanin/azurin family AVS56_RS04355 PF01968 Hydantoinase/oxoprolinase AVS56_RS04355 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS56_RS04365 PF01266 FAD dependent oxidoreductase AVS56_RS04370 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS04385 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS56_RS04390 PF01053 Cys/Met metabolism PLP-dependent enzyme AVS56_RS04395 PF03466 LysR substrate binding domain AVS56_RS04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS04410 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS04425 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS04430 PF07476 Methylaspartate ammonia-lyase C-terminus AVS56_RS04430 PF05034 Methylaspartate ammonia-lyase N-terminus AVS56_RS04440 PF02028 BCCT, betaine/carnitine/choline family transporter AVS56_RS04450 PF03840 Preprotein translocase SecG subunit AVS56_RS04455 PF00121 Triosephosphate isomerase AVS56_RS04460 PF14765 Polyketide synthase dehydratase AVS56_RS04460 PF00550 Phosphopantetheine attachment site AVS56_RS04460 PF16197 Ketoacyl-synthetase C-terminal extension AVS56_RS04460 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS56_RS04460 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS56_RS04460 PF08659 KR domain AVS56_RS04460 PF00698 Acyl transferase domain AVS56_RS04460 PF08240 Alcohol dehydrogenase GroES-like domain AVS56_RS04460 PF08990 Erythronolide synthase docking AVS56_RS04475 PF00291 Pyridoxal-phosphate dependent enzyme AVS56_RS04475 PF13291 ACT domain AVS56_RS04490 PF01138 3' exoribonuclease family, domain 1 AVS56_RS04490 PF00013 KH domain AVS56_RS04490 PF03725 3' exoribonuclease family, domain 2 AVS56_RS04490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVS56_RS04490 PF00575 S1 RNA binding domain AVS56_RS04495 PF00312 Ribosomal protein S15 AVS56_RS04510 PF01066 CDP-alcohol phosphatidyltransferase AVS56_RS04515 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVS56_RS04515 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVS56_RS04520 PF10369 Small subunit of acetolactate synthase AVS56_RS04525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS04525 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS04525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS04540 PF00005 ABC transporter AVS56_RS04540 PF00664 ABC transporter transmembrane region AVS56_RS04545 PF05724 Thiopurine S-methyltransferase (TPMT) AVS56_RS04565 PF07238 PilZ domain AVS56_RS04565 PF07317 Flagellar regulator YcgR AVS56_RS04585 PF01966 HD domain AVS56_RS04595 PF00364 Biotin-requiring enzyme AVS56_RS04600 PF00364 Biotin-requiring enzyme AVS56_RS04600 PF02436 Conserved carboxylase domain AVS56_RS04600 PF00682 HMGL-like AVS56_RS04620 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS04620 PF07702 UTRA domain AVS56_RS04625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS56_RS04625 PF00289 Biotin carboxylase, N-terminal domain AVS56_RS04625 PF02785 Biotin carboxylase C-terminal domain AVS56_RS04630 PF01039 Carboxyl transferase domain AVS56_RS04675 PF00005 ABC transporter AVS56_RS04675 PF00664 ABC transporter transmembrane region AVS56_RS04680 PF00248 Aldo/keto reductase family AVS56_RS04685 PF00248 Aldo/keto reductase family AVS56_RS04700 PF00149 Calcineurin-like phosphoesterase AVS56_RS04705 PF00905 Penicillin binding protein transpeptidase domain AVS56_RS04705 PF17092 Penicillin-binding protein OB-like domain AVS56_RS04705 PF00912 Transglycosylase AVS56_RS04710 PF00326 Prolyl oligopeptidase family AVS56_RS04725 PF00817 impB/mucB/samB family AVS56_RS04725 PF11798 IMS family HHH motif AVS56_RS04725 PF11799 impB/mucB/samB family C-terminal domain AVS56_RS04735 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS04740 PF03466 LysR substrate binding domain AVS56_RS04765 PF07690 Major Facilitator Superfamily AVS56_RS04770 PF13419 Haloacid dehalogenase-like hydrolase AVS56_RS04780 PF00691 OmpA family AVS56_RS04785 PF00521 DNA gyrase/topoisomerase IV, subunit A AVS56_RS04785 PF03989 DNA gyrase C-terminal domain, beta-propeller AVS56_RS04790 PF00266 Aminotransferase class-V AVS56_RS04795 PF01817 Chorismate mutase type II AVS56_RS04795 PF00800 Prephenate dehydratase AVS56_RS04795 PF01842 ACT domain AVS56_RS04800 PF02153 Prephenate dehydrogenase AVS56_RS04805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVS56_RS04810 PF02224 Cytidylate kinase AVS56_RS04815 PF00575 S1 RNA binding domain AVS56_RS04820 PF00216 Bacterial DNA-binding protein AVS56_RS04830 PF18073 Rubredoxin metal binding domain AVS56_RS04835 PF00294 pfkB family carbohydrate kinase AVS56_RS04840 PF01370 NAD dependent epimerase/dehydratase family AVS56_RS04845 PF10531 SLBB domain AVS56_RS04855 PF00291 Pyridoxal-phosphate dependent enzyme AVS56_RS04860 PF13406 Transglycosylase SLT domain AVS56_RS04865 PF00850 Histone deacetylase domain AVS56_RS04870 PF01012 Electron transfer flavoprotein domain AVS56_RS04875 PF01012 Electron transfer flavoprotein domain AVS56_RS04875 PF00766 Electron transfer flavoprotein FAD-binding domain AVS56_RS04880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS04880 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVS56_RS04880 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS04880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS04885 PF00578 AhpC/TSA family AVS56_RS04885 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVS56_RS04900 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS04910 PF12857 TOBE-like domain AVS56_RS04910 PF17850 CysA C-terminal regulatory domain AVS56_RS04910 PF00005 ABC transporter AVS56_RS04915 PF01507 Phosphoadenosine phosphosulfate reductase family AVS56_RS04925 PF04055 Radical SAM superfamily AVS56_RS04940 PF01245 Ribosomal protein L19 AVS56_RS04945 PF00293 NUDIX domain AVS56_RS04955 PF00248 Aldo/keto reductase family AVS56_RS04965 PF07690 Major Facilitator Superfamily AVS56_RS04970 PF04345 Chorismate lyase AVS56_RS04975 PF01479 S4 domain AVS56_RS04975 PF00849 RNA pseudouridylate synthase AVS56_RS04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS04980 PF03466 LysR substrate binding domain AVS56_RS04985 PF00529 HlyD membrane-fusion protein of T1SS AVS56_RS04985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS56_RS04990 PF00873 AcrB/AcrD/AcrF family AVS56_RS04995 PF02321 Outer membrane efflux protein AVS56_RS05005 PF02630 SCO1/SenC AVS56_RS05010 PF01432 Peptidase family M3 AVS56_RS05015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVS56_RS05015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVS56_RS05020 PF00196 Bacterial regulatory proteins, luxR family AVS56_RS05020 PF00072 Response regulator receiver domain AVS56_RS05025 PF00989 PAS fold AVS56_RS05025 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS05030 PF17831 Pyruvate dehydrogenase E1 component middle domain AVS56_RS05030 PF00456 Transketolase, thiamine diphosphate binding domain AVS56_RS05035 PF00364 Biotin-requiring enzyme AVS56_RS05035 PF02817 e3 binding domain AVS56_RS05035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS56_RS05040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS05040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS56_RS05045 PF00669 Bacterial flagellin N-terminal helical region AVS56_RS05045 PF00700 Bacterial flagellin C-terminal helical region AVS56_RS05055 PF04452 RNA methyltransferase AVS56_RS05060 PF00456 Transketolase, thiamine diphosphate binding domain AVS56_RS05060 PF02779 Transketolase, pyrimidine binding domain AVS56_RS05060 PF02780 Transketolase, C-terminal domain AVS56_RS05065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVS56_RS05065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVS56_RS05070 PF00162 Phosphoglycerate kinase AVS56_RS05080 PF00871 Acetokinase family AVS56_RS05085 PF01515 Phosphate acetyl/butaryl transferase AVS56_RS05090 PF11339 Protein of unknown function (DUF3141) AVS56_RS05095 PF02798 Glutathione S-transferase, N-terminal domain AVS56_RS05095 PF14834 Glutathione S-transferase, C-terminal domain AVS56_RS05120 PF01556 DnaJ C terminal domain AVS56_RS05120 PF00226 DnaJ domain AVS56_RS05130 PF03591 AzlC protein AVS56_RS05140 PF00994 Probable molybdopterin binding domain AVS56_RS05150 PF01551 Peptidase family M23 AVS56_RS05150 PF08525 Opacity-associated protein A N-terminal motif AVS56_RS05150 PF01476 LysM domain AVS56_RS05160 PF01176 Translation initiation factor 1A / IF-1 AVS56_RS05170 PF04545 Sigma-70, region 4 AVS56_RS05170 PF04539 Sigma-70 region 3 AVS56_RS05170 PF04542 Sigma-70 region 2 AVS56_RS05175 PF05247 Flagellar transcriptional activator (FlhD) AVS56_RS05180 PF05280 Flagellar transcriptional activator (FlhC) AVS56_RS05185 PF01618 MotA/TolQ/ExbB proton channel family AVS56_RS05190 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVS56_RS05190 PF00691 OmpA family AVS56_RS05195 PF00072 Response regulator receiver domain AVS56_RS05200 PF01627 Hpt domain AVS56_RS05200 PF02895 Signal transducing histidine kinase, homodimeric domain AVS56_RS05200 PF01584 CheW-like domain AVS56_RS05200 PF09078 CheY binding AVS56_RS05200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS05205 PF01584 CheW-like domain AVS56_RS05210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS56_RS05210 PF00672 HAMP domain AVS56_RS05210 PF02203 Tar ligand binding domain homologue AVS56_RS05220 PF01339 CheB methylesterase AVS56_RS05220 PF00072 Response regulator receiver domain AVS56_RS05225 PF00072 Response regulator receiver domain AVS56_RS05230 PF04344 Chemotaxis phosphatase, CheZ AVS56_RS05255 PF00248 Aldo/keto reductase family AVS56_RS05260 PF00795 Carbon-nitrogen hydrolase AVS56_RS05265 PF03471 Transporter associated domain AVS56_RS05265 PF00571 CBS domain AVS56_RS05270 PF02130 Uncharacterized protein family UPF0054 AVS56_RS05275 PF02562 PhoH-like protein AVS56_RS05280 PF04055 Radical SAM superfamily AVS56_RS05280 PF01938 TRAM domain AVS56_RS05280 PF00919 Uncharacterized protein family UPF0004 AVS56_RS05295 PF02355 Protein export membrane protein AVS56_RS05295 PF07549 SecD/SecF GG Motif AVS56_RS05300 PF13721 SecD export protein N-terminal TM region AVS56_RS05300 PF07549 SecD/SecF GG Motif AVS56_RS05300 PF02355 Protein export membrane protein AVS56_RS05305 PF02699 Preprotein translocase subunit AVS56_RS05310 PF01702 Queuine tRNA-ribosyltransferase AVS56_RS05315 PF02547 Queuosine biosynthesis protein AVS56_RS05320 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AVS56_RS05335 PF03212 Pertactin AVS56_RS05335 PF03797 Autotransporter beta-domain AVS56_RS05340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVS56_RS05340 PF14824 Sirohaem biosynthesis protein central AVS56_RS05340 PF10414 Sirohaem synthase dimerisation region AVS56_RS05365 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVS56_RS05370 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AVS56_RS05370 PF01464 Transglycosylase SLT domain AVS56_RS05375 PF00155 Aminotransferase class I and II AVS56_RS05385 PF00390 Malic enzyme, N-terminal domain AVS56_RS05385 PF03949 Malic enzyme, NAD binding domain AVS56_RS05385 PF01515 Phosphate acetyl/butaryl transferase AVS56_RS05395 PF01337 Barstar (barnase inhibitor) AVS56_RS05410 PF00005 ABC transporter AVS56_RS05415 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS05420 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS05425 PF12849 PBP superfamily domain AVS56_RS05430 PF13089 Polyphosphate kinase N-terminal domain AVS56_RS05430 PF17941 Polyphosphate kinase C-terminal domain 1 AVS56_RS05430 PF13090 Polyphosphate kinase C-terminal domain 2 AVS56_RS05430 PF02503 Polyphosphate kinase middle domain AVS56_RS05435 PF02541 Ppx/GppA phosphatase family AVS56_RS05445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS56_RS05445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS56_RS05445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS56_RS05445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS56_RS05450 PF00809 Pterin binding enzyme AVS56_RS05455 PF00004 ATPase family associated with various cellular activities (AAA) AVS56_RS05455 PF06480 FtsH Extracellular AVS56_RS05455 PF01434 Peptidase family M41 AVS56_RS05455 PF17862 AAA+ lid domain AVS56_RS05460 PF01728 FtsJ-like methyltransferase AVS56_RS05465 PF01985 CRS1 / YhbY (CRM) domain AVS56_RS05490 PF01636 Phosphotransferase enzyme family AVS56_RS05495 PF01207 Dihydrouridine synthase (Dus) AVS56_RS05510 PF03631 Virulence factor BrkB AVS56_RS05520 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVS56_RS05525 PF00072 Response regulator receiver domain AVS56_RS05525 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS05530 PF07689 KaiB domain AVS56_RS05530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS05530 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS05540 PF00005 ABC transporter AVS56_RS05540 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS05550 PF11862 Domain of unknown function (DUF3382) AVS56_RS05550 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS05560 PF00005 ABC transporter AVS56_RS05565 PF00501 AMP-binding enzyme AVS56_RS05570 PF00440 Bacterial regulatory proteins, tetR family AVS56_RS05570 PF17932 Tetracyclin repressor-like, C-terminal domain AVS56_RS05580 PF00152 tRNA synthetases class II (D, K and N) AVS56_RS05580 PF01336 OB-fold nucleic acid binding domain AVS56_RS05585 PF00106 short chain dehydrogenase AVS56_RS05595 PF01368 DHH family AVS56_RS05595 PF17768 RecJ OB domain AVS56_RS05595 PF02272 DHHA1 domain AVS56_RS05605 PF12704 MacB-like periplasmic core domain AVS56_RS05605 PF02687 FtsX-like permease family AVS56_RS05610 PF00005 ABC transporter AVS56_RS05615 PF01026 TatD related DNase AVS56_RS05645 PF13567 Domain of unknown function (DUF4131) AVS56_RS05645 PF00753 Metallo-beta-lactamase superfamily AVS56_RS05645 PF03772 Competence protein AVS56_RS05655 PF02811 PHP domain AVS56_RS05660 PF01272 Transcription elongation factor, GreA/GreB, C-term AVS56_RS05660 PF03449 Transcription elongation factor, N-terminal AVS56_RS05670 PF16970 Type-1 fimbrial protein, A AVS56_RS05675 PF00390 Malic enzyme, N-terminal domain AVS56_RS05675 PF03949 Malic enzyme, NAD binding domain AVS56_RS05675 PF01515 Phosphate acetyl/butaryl transferase AVS56_RS05680 PF17831 Pyruvate dehydrogenase E1 component middle domain AVS56_RS05680 PF00456 Transketolase, thiamine diphosphate binding domain AVS56_RS05685 PF01037 Lrp/AsnC ligand binding domain AVS56_RS05695 PF16870 2-oxoglutarate dehydrogenase C-terminal AVS56_RS05695 PF02779 Transketolase, pyrimidine binding domain AVS56_RS05695 PF00676 Dehydrogenase E1 component AVS56_RS05695 PF16078 2-oxoglutarate dehydrogenase N-terminus AVS56_RS05700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS56_RS05700 PF02817 e3 binding domain AVS56_RS05700 PF00364 Biotin-requiring enzyme AVS56_RS05705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS05705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS56_RS05710 PF03969 AFG1-like ATPase AVS56_RS05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS05720 PF03466 LysR substrate binding domain AVS56_RS05730 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS05750 PF00579 tRNA synthetases class I (W and Y) AVS56_RS05755 PF16921 Tex protein YqgF-like domain AVS56_RS05755 PF09371 Tex-like protein N-terminal domain AVS56_RS05755 PF17674 HHH domain AVS56_RS05755 PF00575 S1 RNA binding domain AVS56_RS05760 PF04851 Type III restriction enzyme, res subunit AVS56_RS05760 PF13307 Helicase C-terminal domain AVS56_RS05765 PF13525 Outer membrane lipoprotein AVS56_RS05770 PF01479 S4 domain AVS56_RS05770 PF00849 RNA pseudouridylate synthase AVS56_RS05775 PF02578 Multi-copper polyphenol oxidoreductase laccase AVS56_RS05780 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AVS56_RS05785 PF00106 short chain dehydrogenase AVS56_RS05790 PF07879 PHB/PHA accumulation regulator DNA-binding domain AVS56_RS05790 PF05233 PHB accumulation regulatory domain AVS56_RS05795 PF10634 Fe2+ transport protein AVS56_RS05805 PF03239 Iron permease FTR1 family AVS56_RS05815 PF02567 Phenazine biosynthesis-like protein AVS56_RS05840 PF13378 Enolase C-terminal domain-like AVS56_RS05840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVS56_RS05845 PF03466 LysR substrate binding domain AVS56_RS05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS05855 PF07690 Major Facilitator Superfamily AVS56_RS05870 PF17676 LD-carboxypeptidase C-terminal domain AVS56_RS05870 PF02016 LD-carboxypeptidase N-terminal domain AVS56_RS05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS05880 PF03466 LysR substrate binding domain AVS56_RS05885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS56_RS05885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS56_RS05890 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS05915 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVS56_RS05940 PF00005 ABC transporter AVS56_RS05945 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS05950 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS05955 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS05960 PF00155 Aminotransferase class I and II AVS56_RS05990 PF02627 Carboxymuconolactone decarboxylase family AVS56_RS05995 PF04542 Sigma-70 region 2 AVS56_RS05995 PF12680 SnoaL-like domain AVS56_RS05995 PF08281 Sigma-70, region 4 AVS56_RS06005 PF12843 Putative quorum-sensing-regulated virulence factor AVS56_RS06010 PF00293 NUDIX domain AVS56_RS06025 PF00027 Cyclic nucleotide-binding domain AVS56_RS06025 PF13545 Crp-like helix-turn-helix domain AVS56_RS06030 PF07724 AAA domain (Cdc48 subfamily) AVS56_RS06030 PF10431 C-terminal, D2-small domain, of ClpB protein AVS56_RS06030 PF00004 ATPase family associated with various cellular activities (AAA) AVS56_RS06030 PF02861 Clp amino terminal domain, pathogenicity island component AVS56_RS06030 PF17871 AAA lid domain AVS56_RS06045 PF03212 Pertactin AVS56_RS06045 PF03797 Autotransporter beta-domain AVS56_RS06050 PF03212 Pertactin AVS56_RS06050 PF03797 Autotransporter beta-domain AVS56_RS06065 PF09370 Phosphoenolpyruvate hydrolase-like AVS56_RS06075 PF03466 LysR substrate binding domain AVS56_RS06075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS06080 PF07969 Amidohydrolase family AVS56_RS06090 PF00258 Flavodoxin AVS56_RS06090 PF00667 FAD binding domain AVS56_RS06090 PF00175 Oxidoreductase NAD-binding domain AVS56_RS06095 PF02424 ApbE family AVS56_RS06115 PF00005 ABC transporter AVS56_RS06120 PF01061 ABC-2 type transporter AVS56_RS06130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVS56_RS06135 PF01593 Flavin containing amine oxidoreductase AVS56_RS06135 PF01593 Flavin containing amine oxidoreductase AVS56_RS06150 PF01168 Alanine racemase, N-terminal domain AVS56_RS06150 PF00842 Alanine racemase, C-terminal domain AVS56_RS06170 PF04545 Sigma-70, region 4 AVS56_RS06170 PF04542 Sigma-70 region 2 AVS56_RS06175 PF12450 von Willebrand factor AVS56_RS06175 PF00092 von Willebrand factor type A domain AVS56_RS06175 PF12034 Domain of unknown function (DUF3520) AVS56_RS06180 PF18073 Rubredoxin metal binding domain AVS56_RS06195 PF01554 MatE AVS56_RS06205 PF01197 Ribosomal protein L31 AVS56_RS06210 PF03301 Tryptophan 2,3-dioxygenase AVS56_RS06215 PF04199 Putative cyclase AVS56_RS06220 PF04002 RadC-like JAB domain AVS56_RS06225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVS56_RS06230 PF02401 LytB protein AVS56_RS06235 PF14497 Glutathione S-transferase, C-terminal domain AVS56_RS06235 PF02798 Glutathione S-transferase, N-terminal domain AVS56_RS06255 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS56_RS06255 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVS56_RS06260 PF00881 Nitroreductase family AVS56_RS06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS06265 PF03466 LysR substrate binding domain AVS56_RS06275 PF04079 Segregation and condensation complex subunit ScpB AVS56_RS06280 PF01479 S4 domain AVS56_RS06280 PF00849 RNA pseudouridylate synthase AVS56_RS06285 PF17384 RimP C-terminal SH3 domain AVS56_RS06285 PF02576 RimP N-terminal domain AVS56_RS06290 PF08529 NusA N-terminal domain AVS56_RS06290 PF13184 NusA-like KH domain AVS56_RS06295 PF11987 Translation-initiation factor 2 AVS56_RS06295 PF00009 Elongation factor Tu GTP binding domain AVS56_RS06295 PF08364 Bacterial translation initiation factor IF-2 associated region AVS56_RS06295 PF04760 Translation initiation factor IF-2, N-terminal region AVS56_RS06300 PF02033 Ribosome-binding factor A AVS56_RS06305 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVS56_RS06305 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVS56_RS06310 PF03144 Elongation factor Tu domain 2 AVS56_RS06310 PF00009 Elongation factor Tu GTP binding domain AVS56_RS06310 PF00679 Elongation factor G C-terminus AVS56_RS06325 PF03641 Possible lysine decarboxylase AVS56_RS06330 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVS56_RS06330 PF00476 DNA polymerase family A AVS56_RS06330 PF01612 3'-5' exonuclease AVS56_RS06330 PF01367 5'-3' exonuclease, C-terminal SAM fold AVS56_RS06340 PF01738 Dienelactone hydrolase family AVS56_RS06345 PF02690 Na+/Pi-cotransporter AVS56_RS06350 PF03313 Serine dehydratase alpha chain AVS56_RS06350 PF03315 Serine dehydratase beta chain AVS56_RS06355 PF02677 Epoxyqueuosine reductase QueH AVS56_RS06360 PF03710 Glutamate-ammonia ligase adenylyltransferase AVS56_RS06360 PF08335 GlnD PII-uridylyltransferase AVS56_RS06370 PF07497 Rho termination factor, RNA-binding domain AVS56_RS06370 PF07498 Rho termination factor, N-terminal domain AVS56_RS06370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS56_RS06375 PF00085 Thioredoxin AVS56_RS06380 PF00204 DNA gyrase B AVS56_RS06380 PF00986 DNA gyrase B subunit, carboxyl terminus AVS56_RS06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS06380 PF01751 Toprim domain AVS56_RS06390 PF00521 DNA gyrase/topoisomerase IV, subunit A AVS56_RS06395 PF04235 Protein of unknown function (DUF418) AVS56_RS06405 PF00892 EamA-like transporter family AVS56_RS06420 PF01177 Asp/Glu/Hydantoin racemase AVS56_RS06430 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS06430 PF11862 Domain of unknown function (DUF3382) AVS56_RS06435 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS06440 PF13458 Periplasmic binding protein AVS56_RS06450 PF02592 Putative vitamin uptake transporter AVS56_RS06455 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVS56_RS06455 PF03807 NADP oxidoreductase coenzyme F420-dependent AVS56_RS06460 PF13416 Bacterial extracellular solute-binding protein AVS56_RS06465 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS06470 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS06475 PF00005 ABC transporter AVS56_RS06475 PF17912 MalK OB fold domain AVS56_RS06480 PF13458 Periplasmic binding protein AVS56_RS06500 PF04241 Protein of unknown function (DUF423) AVS56_RS06510 PF08808 RES domain AVS56_RS06515 PF03180 NLPA lipoprotein AVS56_RS06520 PF01070 FMN-dependent dehydrogenase AVS56_RS06525 PF02666 Phosphatidylserine decarboxylase AVS56_RS06550 PF02798 Glutathione S-transferase, N-terminal domain AVS56_RS06550 PF00043 Glutathione S-transferase, C-terminal domain AVS56_RS06555 PF00255 Glutathione peroxidase AVS56_RS06575 PF02515 CoA-transferase family III AVS56_RS06580 PF03960 ArsC family AVS56_RS06585 PF00578 AhpC/TSA family AVS56_RS06610 PF07681 DoxX AVS56_RS06615 PF01447 Thermolysin metallopeptidase, catalytic domain AVS56_RS06615 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVS56_RS06615 PF16485 Protealysin propeptide AVS56_RS06625 PF00248 Aldo/keto reductase family AVS56_RS06630 PF00582 Universal stress protein family AVS56_RS06645 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS06645 PF00155 Aminotransferase class I and II AVS56_RS06650 PF01168 Alanine racemase, N-terminal domain AVS56_RS06655 PF08543 Phosphomethylpyrimidine kinase AVS56_RS06665 PF00128 Alpha amylase, catalytic domain AVS56_RS06675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS56_RS06675 PF11941 Domain of unknown function (DUF3459) AVS56_RS06675 PF00128 Alpha amylase, catalytic domain AVS56_RS06680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS56_RS06680 PF00128 Alpha amylase, catalytic domain AVS56_RS06685 PF00128 Alpha amylase, catalytic domain AVS56_RS06685 PF02806 Alpha amylase, C-terminal all-beta domain AVS56_RS06685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVS56_RS06690 PF16657 Maltogenic Amylase, C-terminal domain AVS56_RS06690 PF00128 Alpha amylase, catalytic domain AVS56_RS06695 PF00128 Alpha amylase, catalytic domain AVS56_RS06695 PF11896 Domain of unknown function (DUF3416) AVS56_RS06725 PF03706 Lysylphosphatidylglycerol synthase TM region AVS56_RS06740 PF13091 PLD-like domain AVS56_RS06745 PF03372 Endonuclease/Exonuclease/phosphatase family AVS56_RS06755 PF03551 Transcriptional regulator PadR-like family AVS56_RS06765 PF12951 Passenger-associated-transport-repeat AVS56_RS06775 PF03466 LysR substrate binding domain AVS56_RS06775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS06785 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS56_RS06790 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS06790 PF07729 FCD domain AVS56_RS06795 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS56_RS06795 PF13380 CoA binding domain AVS56_RS06800 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS06810 PF02515 CoA-transferase family III AVS56_RS06815 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS06820 PF00356 Bacterial regulatory proteins, lacI family AVS56_RS06825 PF00694 Aconitase C-terminal domain AVS56_RS06835 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS06840 PF13378 Enolase C-terminal domain-like AVS56_RS06845 PF08546 Ketopantoate reductase PanE/ApbA C terminal AVS56_RS06845 PF02558 Ketopantoate reductase PanE/ApbA AVS56_RS06855 PF00005 ABC transporter AVS56_RS06860 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS06865 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS06875 PF01312 FlhB HrpN YscU SpaS Family AVS56_RS06880 PF00771 FHIPEP family AVS56_RS06885 PF00771 FHIPEP family AVS56_RS06890 PF00448 SRP54-type protein, GTPase domain AVS56_RS06900 PF04316 Anti-sigma-28 factor, FlgM AVS56_RS06910 PF00460 Flagella basal body rod protein AVS56_RS06915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS56_RS06915 PF00460 Flagella basal body rod protein AVS56_RS06920 PF13861 FlgD Tudor-like domain AVS56_RS06920 PF13860 FlgD Ig-like domain AVS56_RS06920 PF03963 Flagellar hook capping protein - N-terminal region AVS56_RS06925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS56_RS06925 PF07559 Flagellar basal body protein FlaE AVS56_RS06925 PF00460 Flagella basal body rod protein AVS56_RS06930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS56_RS06930 PF00460 Flagella basal body rod protein AVS56_RS06935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS56_RS06935 PF00460 Flagella basal body rod protein AVS56_RS06940 PF02107 Flagellar L-ring protein AVS56_RS06945 PF02119 Flagellar P-ring protein AVS56_RS06950 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVS56_RS06950 PF10135 Rod binding protein AVS56_RS06955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVS56_RS06955 PF00460 Flagella basal body rod protein AVS56_RS06960 PF00669 Bacterial flagellin N-terminal helical region AVS56_RS06965 PF02203 Tar ligand binding domain homologue AVS56_RS06965 PF00672 HAMP domain AVS56_RS06965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS56_RS06970 PF00672 HAMP domain AVS56_RS06970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS56_RS06970 PF02203 Tar ligand binding domain homologue AVS56_RS06975 PF08447 PAS fold AVS56_RS06975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS56_RS06985 PF01311 Bacterial export proteins, family 1 AVS56_RS06990 PF01313 Bacterial export proteins, family 3 AVS56_RS06995 PF00813 FliP family AVS56_RS07000 PF04347 Flagellar biosynthesis protein, FliO AVS56_RS07005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS56_RS07005 PF16973 Flagellar motor switch protein FliN N-terminal AVS56_RS07010 PF02154 Flagellar motor switch protein FliM AVS56_RS07010 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS56_RS07015 PF03748 Flagellar basal body-associated protein FliL AVS56_RS07040 PF18269 T3SS EscN ATPase C-terminal domain AVS56_RS07040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS56_RS07050 PF14841 FliG middle domain AVS56_RS07050 PF14842 FliG N-terminal domain AVS56_RS07050 PF01706 FliG C-terminal domain AVS56_RS07055 PF01514 Secretory protein of YscJ/FliF family AVS56_RS07055 PF08345 Flagellar M-ring protein C-terminal AVS56_RS07060 PF02049 Flagellar hook-basal body complex protein FliE AVS56_RS07070 PF01312 FlhB HrpN YscU SpaS Family AVS56_RS07090 PF02561 Flagellar protein FliS AVS56_RS07095 PF02465 Flagellar hook-associated protein 2 N-terminus AVS56_RS07095 PF07195 Flagellar hook-associated protein 2 C-terminus AVS56_RS07095 PF07196 Flagellin hook IN motif AVS56_RS07105 PF02875 Mur ligase family, glutamate ligase domain AVS56_RS07105 PF08245 Mur ligase middle domain AVS56_RS07120 PF00156 Phosphoribosyl transferase domain AVS56_RS07135 PF01909 Nucleotidyltransferase domain AVS56_RS07135 PF01966 HD domain AVS56_RS07135 PF08335 GlnD PII-uridylyltransferase AVS56_RS07140 PF00557 Metallopeptidase family M24 AVS56_RS07145 PF00318 Ribosomal protein S2 AVS56_RS07150 PF00889 Elongation factor TS AVS56_RS07155 PF00696 Amino acid kinase family AVS56_RS07160 PF01765 Ribosome recycling factor AVS56_RS07165 PF01255 Putative undecaprenyl diphosphate synthase AVS56_RS07175 PF13288 DXP reductoisomerase C-terminal domain AVS56_RS07175 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVS56_RS07175 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVS56_RS07180 PF17820 PDZ domain AVS56_RS07180 PF02163 Peptidase family M50 AVS56_RS07185 PF07244 Surface antigen variable number repeat AVS56_RS07185 PF01103 Surface antigen AVS56_RS07190 PF03938 Outer membrane protein (OmpH-like) AVS56_RS07195 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVS56_RS07195 PF00132 Bacterial transferase hexapeptide (six repeats) AVS56_RS07200 PF07977 FabA-like domain AVS56_RS07205 PF00132 Bacterial transferase hexapeptide (six repeats) AVS56_RS07205 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVS56_RS07210 PF02684 Lipid-A-disaccharide synthetase AVS56_RS07215 PF01351 Ribonuclease HII AVS56_RS07220 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVS56_RS07220 PF00588 SpoU rRNA Methylase family AVS56_RS07225 PF03618 Kinase/pyrophosphorylase AVS56_RS07230 PF02896 PEP-utilising enzyme, TIM barrel domain AVS56_RS07230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVS56_RS07230 PF00391 PEP-utilising enzyme, mobile domain AVS56_RS07235 PF00117 Glutamine amidotransferase class-I AVS56_RS07235 PF00958 GMP synthase C terminal domain AVS56_RS07250 PF01145 SPFH domain / Band 7 family AVS56_RS07250 PF16200 C-terminal region of band_7 AVS56_RS07255 PF00990 Diguanylate cyclase, GGDEF domain AVS56_RS07255 PF08448 PAS fold AVS56_RS07260 PF01668 SmpB protein AVS56_RS07270 PF03364 Polyketide cyclase / dehydrase and lipid transport AVS56_RS07275 PF03658 RnfH family Ubiquitin AVS56_RS07280 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS07280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS07280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS07285 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS07290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS56_RS07290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS56_RS07315 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVS56_RS07320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVS56_RS07320 PF00117 Glutamine amidotransferase class-I AVS56_RS07325 PF02142 MGS-like domain AVS56_RS07325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVS56_RS07325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS56_RS07335 PF00300 Histidine phosphatase superfamily (branch 1) AVS56_RS07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS07340 PF03466 LysR substrate binding domain AVS56_RS07345 PF08402 TOBE domain AVS56_RS07345 PF00005 ABC transporter AVS56_RS07350 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS07365 PF08448 PAS fold AVS56_RS07365 PF08447 PAS fold AVS56_RS07365 PF00563 EAL domain AVS56_RS07365 PF00990 Diguanylate cyclase, GGDEF domain AVS56_RS07370 PF01264 Chorismate synthase AVS56_RS07375 PF01435 Peptidase family M48 AVS56_RS07380 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AVS56_RS07385 PF03453 MoeA N-terminal region (domain I and II) AVS56_RS07385 PF03454 MoeA C-terminal region (domain IV) AVS56_RS07385 PF00994 Probable molybdopterin binding domain AVS56_RS07390 PF12804 MobA-like NTP transferase domain AVS56_RS07395 PF10609 NUBPL iron-transfer P-loop NTPase AVS56_RS07425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVS56_RS07425 PF00384 Molybdopterin oxidoreductase AVS56_RS07425 PF01568 Molydopterin dinucleotide binding domain AVS56_RS07430 PF13247 4Fe-4S dicluster domain AVS56_RS07455 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS07460 PF00005 ABC transporter AVS56_RS07465 PF12849 PBP superfamily domain AVS56_RS07470 PF00330 Aconitase family (aconitate hydratase) AVS56_RS07475 PF00694 Aconitase C-terminal domain AVS56_RS07480 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS56_RS07485 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVS56_RS07485 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVS56_RS07495 PF01416 tRNA pseudouridine synthase AVS56_RS07500 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS07510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS07515 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVS56_RS07535 PF00990 Diguanylate cyclase, GGDEF domain AVS56_RS07545 PF04055 Radical SAM superfamily AVS56_RS07545 PF06969 HemN C-terminal domain AVS56_RS07555 PF00196 Bacterial regulatory proteins, luxR family AVS56_RS07560 PF02824 TGS domain AVS56_RS07560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS56_RS07560 PF03129 Anticodon binding domain AVS56_RS07560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVS56_RS07565 PF00707 Translation initiation factor IF-3, C-terminal domain AVS56_RS07565 PF05198 Translation initiation factor IF-3, N-terminal domain AVS56_RS07570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVS56_RS07570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVS56_RS07580 PF00381 PTS HPr component phosphorylation site AVS56_RS07585 PF02896 PEP-utilising enzyme, TIM barrel domain AVS56_RS07585 PF00391 PEP-utilising enzyme, mobile domain AVS56_RS07585 PF05524 PEP-utilising enzyme, N-terminal AVS56_RS07595 PF02566 OsmC-like protein AVS56_RS07600 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVS56_RS07610 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS07615 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS07620 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS07625 PF00005 ABC transporter AVS56_RS07640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS56_RS07640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS56_RS07650 PF02293 AmiS/UreI family transporter AVS56_RS07655 PF03069 Acetamidase/Formamidase family AVS56_RS07670 PF01116 Fructose-bisphosphate aldolase class-II AVS56_RS07680 PF01259 SAICAR synthetase AVS56_RS07685 PF15723 Motility quorum-sensing regulator, toxin of MqsA AVS56_RS07690 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AVS56_RS07700 PF02600 Disulfide bond formation protein DsbB AVS56_RS07705 PF00731 AIR carboxylase AVS56_RS07710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVS56_RS07710 PF02222 ATP-grasp domain AVS56_RS07715 PF03481 Putative GTP-binding controlling metal-binding AVS56_RS07715 PF01300 Telomere recombination AVS56_RS07720 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS07725 PF01614 Bacterial transcriptional regulator AVS56_RS07725 PF09339 IclR helix-turn-helix domain AVS56_RS07730 PF00491 Arginase family AVS56_RS07735 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS07745 PF00005 ABC transporter AVS56_RS07750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS07750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS07760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS07760 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS07760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS07765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS07765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS07765 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS07770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS07770 PF03466 LysR substrate binding domain AVS56_RS07775 PF02899 Phage integrase, N-terminal SAM-like domain AVS56_RS07775 PF00589 Phage integrase family AVS56_RS07780 PF04073 Aminoacyl-tRNA editing domain AVS56_RS07785 PF01174 SNO glutamine amidotransferase family AVS56_RS07800 PF00768 D-alanyl-D-alanine carboxypeptidase AVS56_RS07810 PF07690 Major Facilitator Superfamily AVS56_RS07820 PF13361 UvrD-like helicase C-terminal domain AVS56_RS07820 PF00580 UvrD/REP helicase N-terminal domain AVS56_RS07820 PF12705 PD-(D/E)XK nuclease superfamily AVS56_RS07835 PF12169 DNA polymerase III subunits gamma and tau domain III AVS56_RS07835 PF12170 DNA polymerase III tau subunit V interacting with alpha AVS56_RS07835 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AVS56_RS07840 PF02575 YbaB/EbfC DNA-binding family AVS56_RS07845 PF13662 Toprim domain AVS56_RS07845 PF02132 RecR protein AVS56_RS07865 PF04228 Putative neutral zinc metallopeptidase AVS56_RS07870 PF01300 Telomere recombination AVS56_RS07910 PF03358 NADPH-dependent FMN reductase AVS56_RS07915 PF07311 Dodecin AVS56_RS07920 PF00488 MutS domain V AVS56_RS07920 PF05192 MutS domain III AVS56_RS07920 PF05190 MutS family domain IV AVS56_RS07920 PF01624 MutS domain I AVS56_RS07920 PF05188 MutS domain II AVS56_RS07925 PF08007 Cupin superfamily protein AVS56_RS07930 PF16970 Type-1 fimbrial protein, A AVS56_RS07935 PF06804 NlpB/DapX lipoprotein AVS56_RS07940 PF00701 Dihydrodipicolinate synthetase family AVS56_RS07945 PF02163 Peptidase family M50 AVS56_RS07945 PF17820 PDZ domain AVS56_RS07960 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS07965 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS07970 PF00005 ABC transporter AVS56_RS07975 PF02824 TGS domain AVS56_RS07975 PF13291 ACT domain AVS56_RS07975 PF04607 Region found in RelA / SpoT proteins AVS56_RS07980 PF01192 RNA polymerase Rpb6 AVS56_RS07985 PF00625 Guanylate kinase AVS56_RS07990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS56_RS07995 PF00034 Cytochrome c AVS56_RS08005 PF00877 NlpC/P60 family AVS56_RS08010 PF01048 Phosphorylase superfamily AVS56_RS08010 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AVS56_RS08030 PF03755 YicC-like family, N-terminal region AVS56_RS08030 PF08340 Domain of unknown function (DUF1732) AVS56_RS08035 PF01138 3' exoribonuclease family, domain 1 AVS56_RS08035 PF03725 3' exoribonuclease family, domain 2 AVS56_RS08045 PF03466 LysR substrate binding domain AVS56_RS08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08050 PF02203 Tar ligand binding domain homologue AVS56_RS08050 PF00672 HAMP domain AVS56_RS08050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS56_RS08055 PF00563 EAL domain AVS56_RS08055 PF00672 HAMP domain AVS56_RS08055 PF17154 Gammaproteobacterial periplasmic sensor domain AVS56_RS08055 PF00990 Diguanylate cyclase, GGDEF domain AVS56_RS08060 PF01725 Ham1 family AVS56_RS08070 PF04055 Radical SAM superfamily AVS56_RS08070 PF06969 HemN C-terminal domain AVS56_RS08075 PF03951 Glutamine synthetase, beta-Grasp domain AVS56_RS08075 PF00120 Glutamine synthetase, catalytic domain AVS56_RS08080 PF00989 PAS fold AVS56_RS08080 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS08085 PF00158 Sigma-54 interaction domain AVS56_RS08085 PF00072 Response regulator receiver domain AVS56_RS08085 PF02954 Bacterial regulatory protein, Fis family AVS56_RS08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08090 PF03466 LysR substrate binding domain AVS56_RS08095 PF02678 Pirin AVS56_RS08095 PF17954 Quercetinase C-terminal cupin domain AVS56_RS08100 PF02678 Pirin AVS56_RS08100 PF05726 Pirin C-terminal cupin domain AVS56_RS08110 PF08402 TOBE domain AVS56_RS08110 PF00005 ABC transporter AVS56_RS08115 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS08125 PF00970 Oxidoreductase FAD-binding domain AVS56_RS08125 PF00175 Oxidoreductase NAD-binding domain AVS56_RS08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08130 PF03466 LysR substrate binding domain AVS56_RS08140 PF00248 Aldo/keto reductase family AVS56_RS08150 PF01042 Endoribonuclease L-PSP AVS56_RS08155 PF00270 DEAD/DEAH box helicase AVS56_RS08155 PF00271 Helicase conserved C-terminal domain AVS56_RS08155 PF17191 RecG wedge domain AVS56_RS08160 PF03466 LysR substrate binding domain AVS56_RS08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08165 PF03466 LysR substrate binding domain AVS56_RS08170 PF00171 Aldehyde dehydrogenase family AVS56_RS08175 PF00210 Ferritin-like domain AVS56_RS08195 PF00535 Glycosyl transferase family 2 AVS56_RS08205 PF00005 ABC transporter AVS56_RS08215 PF00534 Glycosyl transferases group 1 AVS56_RS08225 PF02563 Polysaccharide biosynthesis/export protein AVS56_RS08230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS56_RS08230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS56_RS08230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS56_RS08235 PF01370 NAD dependent epimerase/dehydratase family AVS56_RS08240 PF05159 Capsule polysaccharide biosynthesis protein AVS56_RS08245 PF05159 Capsule polysaccharide biosynthesis protein AVS56_RS08255 PF00106 short chain dehydrogenase AVS56_RS08270 PF14759 Reductase C-terminal AVS56_RS08270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS08280 PF00005 ABC transporter AVS56_RS08285 PF00005 ABC transporter AVS56_RS08285 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS08290 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS08290 PF11862 Domain of unknown function (DUF3382) AVS56_RS08300 PF03741 Integral membrane protein TerC family AVS56_RS08310 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS08325 PF07726 ATPase family associated with various cellular activities (AAA) AVS56_RS08325 PF17863 AAA lid domain AVS56_RS08360 PF00884 Sulfatase AVS56_RS08385 PF00196 Bacterial regulatory proteins, luxR family AVS56_RS08385 PF00072 Response regulator receiver domain AVS56_RS08390 PF00082 Subtilase family AVS56_RS08390 PF03797 Autotransporter beta-domain AVS56_RS08390 PF12951 Passenger-associated-transport-repeat AVS56_RS08395 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AVS56_RS08400 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AVS56_RS08405 PF02798 Glutathione S-transferase, N-terminal domain AVS56_RS08405 PF00043 Glutathione S-transferase, C-terminal domain AVS56_RS08410 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS56_RS08415 PF03466 LysR substrate binding domain AVS56_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08420 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS08430 PF01070 FMN-dependent dehydrogenase AVS56_RS08435 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS56_RS08450 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS08455 PF03466 LysR substrate binding domain AVS56_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08460 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS08485 PF03358 NADPH-dependent FMN reductase AVS56_RS08505 PF07969 Amidohydrolase family AVS56_RS08510 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08520 PF03466 LysR substrate binding domain AVS56_RS08535 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS08540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVS56_RS08540 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AVS56_RS08540 PF13244 Domain of unknown function (DUF4040) AVS56_RS08540 PF00361 Proton-conducting membrane transporter AVS56_RS08545 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVS56_RS08550 PF00361 Proton-conducting membrane transporter AVS56_RS08555 PF01899 Na+/H+ ion antiporter subunit AVS56_RS08560 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AVS56_RS08585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS56_RS08590 PF17676 LD-carboxypeptidase C-terminal domain AVS56_RS08590 PF02016 LD-carboxypeptidase N-terminal domain AVS56_RS08595 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS08600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS08610 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS08615 PF12848 ABC transporter AVS56_RS08615 PF00005 ABC transporter AVS56_RS08620 PF00005 ABC transporter AVS56_RS08650 PF00042 Globin AVS56_RS08650 PF00175 Oxidoreductase NAD-binding domain AVS56_RS08650 PF00970 Oxidoreductase FAD-binding domain AVS56_RS08655 PF02082 Transcriptional regulator AVS56_RS08660 PF01266 FAD dependent oxidoreductase AVS56_RS08675 PF01571 Aminomethyltransferase folate-binding domain AVS56_RS08680 PF02618 YceG-like family AVS56_RS08685 PF02223 Thymidylate kinase AVS56_RS08690 PF12169 DNA polymerase III subunits gamma and tau domain III AVS56_RS08695 PF01026 TatD related DNase AVS56_RS08710 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS08720 PF00005 ABC transporter AVS56_RS08725 PF00491 Arginase family AVS56_RS08730 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVS56_RS08730 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVS56_RS08735 PF00171 Aldehyde dehydrogenase family AVS56_RS08740 PF01546 Peptidase family M20/M25/M40 AVS56_RS08740 PF07687 Peptidase dimerisation domain AVS56_RS08745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS08745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS08745 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS08755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS08755 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS56_RS08765 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS56_RS08765 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS08770 PF07729 FCD domain AVS56_RS08770 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS08780 PF04343 Protein of unknown function, DUF488 AVS56_RS08785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS56_RS08805 PF01425 Amidase AVS56_RS08810 PF07286 Protein of unknown function (DUF1445) AVS56_RS08820 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS08820 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS08820 PF01627 Hpt domain AVS56_RS08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS08820 PF00072 Response regulator receiver domain AVS56_RS08820 PF00989 PAS fold AVS56_RS08825 PF00072 Response regulator receiver domain AVS56_RS08825 PF00196 Bacterial regulatory proteins, luxR family AVS56_RS08830 PF13018 Extended Signal Peptide of Type V secretion system AVS56_RS08830 PF05860 haemagglutination activity domain AVS56_RS08830 PF13332 Hemagglutinin repeat AVS56_RS08830 PF05594 Haemagluttinin repeat AVS56_RS08835 PF16970 Type-1 fimbrial protein, A AVS56_RS08840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AVS56_RS08840 PF02753 Pili assembly chaperone PapD, C-terminal domain AVS56_RS08845 PF13953 PapC C-terminal domain AVS56_RS08845 PF13954 PapC N-terminal domain AVS56_RS08845 PF00577 Outer membrane usher protein AVS56_RS08850 PF00419 Fimbrial protein AVS56_RS08855 PF08479 POTRA domain, ShlB-type AVS56_RS08855 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AVS56_RS08855 PF17287 POTRA domain AVS56_RS08870 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS08895 PF03466 LysR substrate binding domain AVS56_RS08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS08905 PF05378 Hydantoinase/oxoprolinase N-terminal region AVS56_RS08905 PF01968 Hydantoinase/oxoprolinase AVS56_RS08920 PF00924 Mechanosensitive ion channel AVS56_RS08920 PF05552 Conserved TM helix AVS56_RS08930 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS08940 PF00459 Inositol monophosphatase family AVS56_RS08945 PF03741 Integral membrane protein TerC family AVS56_RS08945 PF03471 Transporter associated domain AVS56_RS08950 PF02673 Bacitracin resistance protein BacA AVS56_RS08955 PF00149 Calcineurin-like phosphoesterase AVS56_RS08960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVS56_RS08970 PF09190 DALR domain AVS56_RS08970 PF01406 tRNA synthetases class I (C) catalytic domain AVS56_RS08975 PF02805 Metal binding domain of Ada AVS56_RS08975 PF12833 Helix-turn-helix domain AVS56_RS08975 PF06029 AlkA N-terminal domain AVS56_RS08975 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS56_RS08980 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVS56_RS08990 PF01171 PP-loop family AVS56_RS08990 PF09179 TilS substrate binding domain AVS56_RS08995 PF13840 ACT domain AVS56_RS08995 PF00696 Amino acid kinase family AVS56_RS08995 PF01842 ACT domain AVS56_RS09020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS56_RS09020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS56_RS09025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS09025 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS56_RS09030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS09035 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS09040 PF00561 alpha/beta hydrolase fold AVS56_RS09045 PF03447 Homoserine dehydrogenase, NAD binding domain AVS56_RS09045 PF01958 Domain of unknown function DUF108 AVS56_RS09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS09060 PF03466 LysR substrate binding domain AVS56_RS09080 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS09085 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS09090 PF08402 TOBE domain AVS56_RS09090 PF00005 ABC transporter AVS56_RS09100 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS09100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS56_RS09105 PF09339 IclR helix-turn-helix domain AVS56_RS09105 PF01614 Bacterial transcriptional regulator AVS56_RS09110 PF13380 CoA binding domain AVS56_RS09115 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS09120 PF01042 Endoribonuclease L-PSP AVS56_RS09145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS56_RS09155 PF00535 Glycosyl transferase family 2 AVS56_RS09160 PF01522 Polysaccharide deacetylase AVS56_RS09160 PF14883 Hypothetical glycosyl hydrolase family 13 AVS56_RS09180 PF12802 MarR family AVS56_RS09185 PF00072 Response regulator receiver domain AVS56_RS09185 PF00196 Bacterial regulatory proteins, luxR family AVS56_RS09195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS56_RS09195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS56_RS09195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS56_RS09195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS56_RS09200 PF00342 Phosphoglucose isomerase AVS56_RS09205 PF00132 Bacterial transferase hexapeptide (six repeats) AVS56_RS09215 PF02146 Sir2 family AVS56_RS09220 PF00459 Inositol monophosphatase family AVS56_RS09225 PF00171 Aldehyde dehydrogenase family AVS56_RS09230 PF00202 Aminotransferase class-III AVS56_RS09235 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS09235 PF00155 Aminotransferase class I and II AVS56_RS09245 PF00580 UvrD/REP helicase N-terminal domain AVS56_RS09245 PF13361 UvrD-like helicase C-terminal domain AVS56_RS09250 PF01544 CorA-like Mg2+ transporter protein AVS56_RS09260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS09270 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS09270 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS56_RS09275 PF00005 ABC transporter AVS56_RS09275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS09280 PF01047 MarR family AVS56_RS09295 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AVS56_RS09295 PF08479 POTRA domain, ShlB-type AVS56_RS09300 PF00990 Diguanylate cyclase, GGDEF domain AVS56_RS09300 PF03707 Bacterial signalling protein N terminal repeat AVS56_RS09300 PF00563 EAL domain AVS56_RS09330 PF00263 Bacterial type II and III secretion system protein AVS56_RS09330 PF13629 Pilus formation protein N terminal region AVS56_RS09330 PF04972 BON domain AVS56_RS09340 PF00437 Type II/IV secretion system protein AVS56_RS09370 PF00072 Response regulator receiver domain AVS56_RS09370 PF00158 Sigma-54 interaction domain AVS56_RS09370 PF02954 Bacterial regulatory protein, Fis family AVS56_RS09385 PF08281 Sigma-70, region 4 AVS56_RS09385 PF04542 Sigma-70 region 2 AVS56_RS09395 PF00034 Cytochrome c AVS56_RS09400 PF08207 Elongation factor P (EF-P) KOW-like domain AVS56_RS09400 PF01132 Elongation factor P (EF-P) OB domain AVS56_RS09400 PF09285 Elongation factor P, C-terminal AVS56_RS09415 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVS56_RS09420 PF00694 Aconitase C-terminal domain AVS56_RS09420 PF00330 Aconitase family (aconitate hydratase) AVS56_RS09430 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS09430 PF00593 TonB dependent receptor AVS56_RS09445 PF00691 OmpA family AVS56_RS09455 PF00330 Aconitase family (aconitate hydratase) AVS56_RS09455 PF06434 Aconitate hydratase 2 N-terminus AVS56_RS09455 PF11791 Aconitate B N-terminal domain AVS56_RS09480 PF00892 EamA-like transporter family AVS56_RS09485 PF01925 Sulfite exporter TauE/SafE AVS56_RS09505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS09505 PF03466 LysR substrate binding domain AVS56_RS09510 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVS56_RS09510 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVS56_RS09520 PF03466 LysR substrate binding domain AVS56_RS09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS09565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS56_RS09565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS56_RS09570 PF01425 Amidase AVS56_RS09580 PF00171 Aldehyde dehydrogenase family AVS56_RS09595 PF00133 tRNA synthetases class I (I, L, M and V) AVS56_RS09595 PF13603 Leucyl-tRNA synthetase, Domain 2 AVS56_RS09595 PF09334 tRNA synthetases class I (M) AVS56_RS09595 PF08264 Anticodon-binding domain of tRNA AVS56_RS09600 PF07690 Major Facilitator Superfamily AVS56_RS09605 PF01047 MarR family AVS56_RS09625 PF00916 Sulfate permease family AVS56_RS09625 PF01740 STAS domain AVS56_RS09630 PF00471 Ribosomal protein L33 AVS56_RS09635 PF00830 Ribosomal L28 family AVS56_RS09640 PF07690 Major Facilitator Superfamily AVS56_RS09660 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS09665 PF00571 CBS domain AVS56_RS09665 PF00005 ABC transporter AVS56_RS09670 PF01361 Tautomerase enzyme AVS56_RS09675 PF02803 Thiolase, C-terminal domain AVS56_RS09675 PF00108 Thiolase, N-terminal domain AVS56_RS09685 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS09685 PF07729 FCD domain AVS56_RS09695 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS09700 PF00501 AMP-binding enzyme AVS56_RS09700 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS09705 PF00501 AMP-binding enzyme AVS56_RS09705 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS09710 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS09715 PF00080 Copper/zinc superoxide dismutase (SODC) AVS56_RS09730 PF00005 ABC transporter AVS56_RS09735 PF03459 TOBE domain AVS56_RS09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS09755 PF00529 HlyD membrane-fusion protein of T1SS AVS56_RS09755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS56_RS09760 PF00873 AcrB/AcrD/AcrF family AVS56_RS09765 PF02321 Outer membrane efflux protein AVS56_RS09765 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AVS56_RS09770 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVS56_RS09775 PF01648 4'-phosphopantetheinyl transferase superfamily AVS56_RS09780 PF00933 Glycosyl hydrolase family 3 N terminal domain AVS56_RS09785 PF02151 UvrB/uvrC motif AVS56_RS09785 PF08459 UvrC Helix-hairpin-helix N-terminal AVS56_RS09785 PF01541 GIY-YIG catalytic domain AVS56_RS09790 PF01066 CDP-alcohol phosphatidyltransferase AVS56_RS09805 PF14489 QueF-like protein AVS56_RS09805 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AVS56_RS09810 PF00463 Isocitrate lyase family AVS56_RS09825 PF11862 Domain of unknown function (DUF3382) AVS56_RS09825 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS09830 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS09835 PF13458 Periplasmic binding protein AVS56_RS09840 PF00355 Rieske [2Fe-2S] domain AVS56_RS09840 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS56_RS09845 PF00866 Ring hydroxylating beta subunit AVS56_RS09850 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS09860 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS09865 PF02515 CoA-transferase family III AVS56_RS09870 PF07859 alpha/beta hydrolase fold AVS56_RS09875 PF00501 AMP-binding enzyme AVS56_RS09875 PF14535 AMP-binding enzyme C-terminal domain AVS56_RS09880 PF02803 Thiolase, C-terminal domain AVS56_RS09880 PF00108 Thiolase, N-terminal domain AVS56_RS09900 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS09925 PF01152 Bacterial-like globin AVS56_RS09970 PF01522 Polysaccharide deacetylase AVS56_RS09975 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS10005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS56_RS10005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS10030 PF03466 LysR substrate binding domain AVS56_RS10040 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS10040 PF01799 [2Fe-2S] binding domain AVS56_RS10045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS56_RS10055 PF12833 Helix-turn-helix domain AVS56_RS10055 PF06719 AraC-type transcriptional regulator N-terminus AVS56_RS10075 PF07690 Major Facilitator Superfamily AVS56_RS10090 PF00583 Acetyltransferase (GNAT) family AVS56_RS10100 PF00664 ABC transporter transmembrane region AVS56_RS10100 PF00005 ABC transporter AVS56_RS10110 PF02535 ZIP Zinc transporter AVS56_RS10125 PF00916 Sulfate permease family AVS56_RS10125 PF01740 STAS domain AVS56_RS10145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVS56_RS10145 PF03625 Domain of unknown function DUF302 AVS56_RS10155 PF12833 Helix-turn-helix domain AVS56_RS10155 PF02805 Metal binding domain of Ada AVS56_RS10160 PF07237 Protein of unknown function (DUF1428) AVS56_RS10165 PF02567 Phenazine biosynthesis-like protein AVS56_RS10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS10170 PF03466 LysR substrate binding domain AVS56_RS10175 PF04286 Protein of unknown function (DUF445) AVS56_RS10190 PF00171 Aldehyde dehydrogenase family AVS56_RS10195 PF01590 GAF domain AVS56_RS10195 PF00158 Sigma-54 interaction domain AVS56_RS10195 PF02954 Bacterial regulatory protein, Fis family AVS56_RS10215 PF03788 LrgA family AVS56_RS10220 PF13649 Methyltransferase domain AVS56_RS10230 PF00155 Aminotransferase class I and II AVS56_RS10235 PF00202 Aminotransferase class-III AVS56_RS10280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS56_RS10280 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVS56_RS10285 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVS56_RS10285 PF12801 4Fe-4S binding domain AVS56_RS10285 PF13746 4Fe-4S dicluster domain AVS56_RS10310 PF00005 ABC transporter AVS56_RS10315 PF01061 ABC-2 type transporter AVS56_RS10320 PF01594 AI-2E family transporter AVS56_RS10355 PF03979 Sigma-70 factor, region 1.1 AVS56_RS10355 PF04545 Sigma-70, region 4 AVS56_RS10355 PF04539 Sigma-70 region 3 AVS56_RS10355 PF04546 Sigma-70, non-essential region AVS56_RS10355 PF00140 Sigma-70 factor, region 1.2 AVS56_RS10355 PF04542 Sigma-70 region 2 AVS56_RS10360 PF08278 DNA primase DnaG DnaB-binding AVS56_RS10360 PF10410 DnaB-helicase binding domain of primase AVS56_RS10360 PF01807 CHC2 zinc finger AVS56_RS10360 PF08275 DNA primase catalytic core, N-terminal domain AVS56_RS10365 PF01165 Ribosomal protein S21 AVS56_RS10370 PF00156 Phosphoribosyl transferase domain AVS56_RS10375 PF00709 Adenylosuccinate synthetase AVS56_RS10380 PF13393 Histidyl-tRNA synthetase AVS56_RS10385 PF01145 SPFH domain / Band 7 family AVS56_RS10390 PF12221 Bacterial membrane protein N terminal AVS56_RS10390 PF01145 SPFH domain / Band 7 family AVS56_RS10395 PF01926 50S ribosome-binding GTPase AVS56_RS10395 PF13167 GTP-binding GTPase N-terminal AVS56_RS10395 PF16360 GTP-binding GTPase Middle Region AVS56_RS10400 PF17209 Hfq protein AVS56_RS10405 PF00155 Aminotransferase class I and II AVS56_RS10410 PF01926 50S ribosome-binding GTPase AVS56_RS10410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVS56_RS10415 PF13360 PQQ-like domain AVS56_RS10420 PF09976 Tetratricopeptide repeat-like domain AVS56_RS10425 PF03129 Anticodon binding domain AVS56_RS10425 PF13393 Histidyl-tRNA synthetase AVS56_RS10430 PF04551 GcpE protein AVS56_RS10440 PF04055 Radical SAM superfamily AVS56_RS10445 PF00334 Nucleoside diphosphate kinase AVS56_RS10450 PF00133 tRNA synthetases class I (I, L, M and V) AVS56_RS10450 PF08264 Anticodon-binding domain of tRNA AVS56_RS10450 PF10458 Valyl tRNA synthetase tRNA binding arm AVS56_RS10460 PF00072 Response regulator receiver domain AVS56_RS10460 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS10465 PF08521 Two-component sensor kinase N-terminal AVS56_RS10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS10465 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS10485 PF00266 Aminotransferase class-V AVS56_RS10490 PF01746 tRNA (Guanine-1)-methyltransferase AVS56_RS10495 PF01782 RimM N-terminal domain AVS56_RS10500 PF00886 Ribosomal protein S16 AVS56_RS10510 PF01206 Sulfurtransferase TusA AVS56_RS10515 PF01411 tRNA synthetases class II (A) AVS56_RS10515 PF02272 DHHA1 domain AVS56_RS10515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVS56_RS10560 PF01425 Amidase AVS56_RS10565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS10565 PF00005 ABC transporter AVS56_RS10570 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS10575 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS10580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS10600 PF03466 LysR substrate binding domain AVS56_RS10605 PF13416 Bacterial extracellular solute-binding protein AVS56_RS10610 PF01266 FAD dependent oxidoreductase AVS56_RS10615 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS10615 PF00175 Oxidoreductase NAD-binding domain AVS56_RS10615 PF00970 Oxidoreductase FAD-binding domain AVS56_RS10620 PF02261 Aspartate decarboxylase AVS56_RS10635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVS56_RS10640 PF17042 Nucleotide-binding C-terminal domain AVS56_RS10640 PF07005 Sugar-binding N-terminal domain AVS56_RS10645 PF03812 2-keto-3-deoxygluconate permease AVS56_RS10655 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS10665 PF02142 MGS-like domain AVS56_RS10670 PF04384 Iron-sulphur cluster assembly AVS56_RS10675 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS10680 PF00012 Hsp70 protein AVS56_RS10685 PF07743 HSCB C-terminal oligomerisation domain AVS56_RS10690 PF01521 Iron-sulphur cluster biosynthesis AVS56_RS10695 PF01592 NifU-like N terminal domain AVS56_RS10700 PF00266 Aminotransferase class-V AVS56_RS10705 PF02082 Transcriptional regulator AVS56_RS10710 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVS56_RS10715 PF00271 Helicase conserved C-terminal domain AVS56_RS10715 PF02151 UvrB/uvrC motif AVS56_RS10715 PF12344 Ultra-violet resistance protein B AVS56_RS10715 PF04851 Type III restriction enzyme, res subunit AVS56_RS10715 PF17757 UvrB interaction domain AVS56_RS10720 PF00155 Aminotransferase class I and II AVS56_RS10725 PF01726 LexA DNA binding domain AVS56_RS10725 PF00717 Peptidase S24-like AVS56_RS10730 PF03212 Pertactin AVS56_RS10730 PF03797 Autotransporter beta-domain AVS56_RS10755 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS10760 PF01144 Coenzyme A transferase AVS56_RS10765 PF01144 Coenzyme A transferase AVS56_RS10775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS10775 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS10775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS10785 PF02803 Thiolase, C-terminal domain AVS56_RS10785 PF00108 Thiolase, N-terminal domain AVS56_RS10795 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS10800 PF01575 MaoC like domain AVS56_RS10805 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS10810 PF02515 CoA-transferase family III AVS56_RS10815 PF03466 LysR substrate binding domain AVS56_RS10815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS10820 PF05362 Lon protease (S16) C-terminal proteolytic domain AVS56_RS10820 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVS56_RS10820 PF00004 ATPase family associated with various cellular activities (AAA) AVS56_RS10825 PF06689 ClpX C4-type zinc finger AVS56_RS10825 PF10431 C-terminal, D2-small domain, of ClpB protein AVS56_RS10825 PF07724 AAA domain (Cdc48 subfamily) AVS56_RS10830 PF00574 Clp protease AVS56_RS10835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVS56_RS10835 PF05698 Bacterial trigger factor protein (TF) C-terminus AVS56_RS10835 PF05697 Bacterial trigger factor protein (TF) AVS56_RS10840 PF03350 Uncharacterized protein family, UPF0114 AVS56_RS10855 PF00313 'Cold-shock' DNA-binding domain AVS56_RS10890 PF00132 Bacterial transferase hexapeptide (six repeats) AVS56_RS10890 PF14602 Hexapeptide repeat of succinyl-transferase AVS56_RS10890 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVS56_RS10895 PF07687 Peptidase dimerisation domain AVS56_RS10895 PF01546 Peptidase family M20/M25/M40 AVS56_RS10900 PF05175 Methyltransferase small domain AVS56_RS10905 PF12848 ABC transporter AVS56_RS10905 PF00005 ABC transporter AVS56_RS10910 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS10915 PF13361 UvrD-like helicase C-terminal domain AVS56_RS10915 PF00580 UvrD/REP helicase N-terminal domain AVS56_RS10935 PF00551 Formyl transferase AVS56_RS10940 PF06574 FAD synthetase AVS56_RS10940 PF01687 Riboflavin kinase AVS56_RS10945 PF06827 Zinc finger found in FPG and IleRS AVS56_RS10945 PF00133 tRNA synthetases class I (I, L, M and V) AVS56_RS10945 PF08264 Anticodon-binding domain of tRNA AVS56_RS10950 PF01252 Signal peptidase (SPase) II AVS56_RS10955 PF04127 DNA / pantothenate metabolism flavoprotein AVS56_RS10955 PF02441 Flavoprotein AVS56_RS10965 PF01037 Lrp/AsnC ligand binding domain AVS56_RS10985 PF13406 Transglycosylase SLT domain AVS56_RS10990 PF04305 Protein of unknown function (DUF455) AVS56_RS11010 PF02875 Mur ligase family, glutamate ligase domain AVS56_RS11010 PF08245 Mur ligase middle domain AVS56_RS11010 PF08443 RimK-like ATP-grasp domain AVS56_RS11015 PF08245 Mur ligase middle domain AVS56_RS11015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS56_RS11015 PF02875 Mur ligase family, glutamate ligase domain AVS56_RS11020 PF05532 CsbD-like AVS56_RS11030 PF04972 BON domain AVS56_RS11045 PF00005 ABC transporter AVS56_RS11050 PF13472 GDSL-like Lipase/Acylhydrolase family AVS56_RS11055 PF13145 PPIC-type PPIASE domain AVS56_RS11060 PF03009 Glycerophosphoryl diester phosphodiesterase family AVS56_RS11065 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AVS56_RS11070 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS11070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS56_RS11075 PF08534 Redoxin AVS56_RS11075 PF00462 Glutaredoxin AVS56_RS11085 PF09278 MerR, DNA binding AVS56_RS11085 PF00376 MerR family regulatory protein AVS56_RS11090 PF05958 tRNA (Uracil-5-)-methyltransferase AVS56_RS11110 PF01476 LysM domain AVS56_RS11110 PF01551 Peptidase family M23 AVS56_RS11120 PF01975 Survival protein SurE AVS56_RS11125 PF02660 Glycerol-3-phosphate acyltransferase AVS56_RS11135 PF00814 Glycoprotease family AVS56_RS11140 PF00860 Permease family AVS56_RS11150 PF00085 Thioredoxin AVS56_RS11155 PF01205 Uncharacterized protein family UPF0029 AVS56_RS11165 PF00583 Acetyltransferase (GNAT) family AVS56_RS11170 PF12802 MarR family AVS56_RS11180 PF00202 Aminotransferase class-III AVS56_RS11185 PF16868 NMT1-like family AVS56_RS11205 PF03797 Autotransporter beta-domain AVS56_RS11215 PF13396 Phospholipase_D-nuclease N-terminal AVS56_RS11215 PF13091 PLD-like domain AVS56_RS11220 PF01740 STAS domain AVS56_RS11225 PF13581 Histidine kinase-like ATPase domain AVS56_RS11230 PF01168 Alanine racemase, N-terminal domain AVS56_RS11230 PF00842 Alanine racemase, C-terminal domain AVS56_RS11240 PF00672 HAMP domain AVS56_RS11240 PF07228 Stage II sporulation protein E (SpoIIE) AVS56_RS11265 PF08281 Sigma-70, region 4 AVS56_RS11265 PF04542 Sigma-70 region 2 AVS56_RS11270 PF00263 Bacterial type II and III secretion system protein AVS56_RS11270 PF03958 Bacterial type II/III secretion system short domain AVS56_RS11280 PF01312 FlhB HrpN YscU SpaS Family AVS56_RS11285 PF01311 Bacterial export proteins, family 1 AVS56_RS11290 PF01313 Bacterial export proteins, family 3 AVS56_RS11295 PF00813 FliP family AVS56_RS11300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVS56_RS11315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS56_RS11315 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS56_RS11315 PF18269 T3SS EscN ATPase C-terminal domain AVS56_RS11320 PF02108 Flagellar assembly protein FliH AVS56_RS11330 PF01514 Secretory protein of YscJ/FliF family AVS56_RS11395 PF00771 FHIPEP family AVS56_RS11425 PF01272 Transcription elongation factor, GreA/GreB, C-term AVS56_RS11425 PF03449 Transcription elongation factor, N-terminal AVS56_RS11430 PF00672 HAMP domain AVS56_RS11430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVS56_RS11430 PF02203 Tar ligand binding domain homologue AVS56_RS11435 PF00860 Permease family AVS56_RS11455 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS11465 PF13419 Haloacid dehalogenase-like hydrolase AVS56_RS11470 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS11475 PF08402 TOBE domain AVS56_RS11475 PF00005 ABC transporter AVS56_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS11480 PF03466 LysR substrate binding domain AVS56_RS11490 PF00581 Rhodanese-like domain AVS56_RS11500 PF01435 Peptidase family M48 AVS56_RS11505 PF00107 Zinc-binding dehydrogenase AVS56_RS11505 PF08240 Alcohol dehydrogenase GroES-like domain AVS56_RS11510 PF00892 EamA-like transporter family AVS56_RS11520 PF01047 MarR family AVS56_RS11530 PF00529 HlyD membrane-fusion protein of T1SS AVS56_RS11530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVS56_RS11535 PF07690 Major Facilitator Superfamily AVS56_RS11540 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS56_RS11545 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS11545 PF00155 Aminotransferase class I and II AVS56_RS11550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS11555 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS11560 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS56_RS11560 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS11575 PF00202 Aminotransferase class-III AVS56_RS11580 PF07883 Cupin domain AVS56_RS11585 PF00850 Histone deacetylase domain AVS56_RS11590 PF01546 Peptidase family M20/M25/M40 AVS56_RS11590 PF07687 Peptidase dimerisation domain AVS56_RS11600 PF00171 Aldehyde dehydrogenase family AVS56_RS11605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS56_RS11610 PF00202 Aminotransferase class-III AVS56_RS11615 PF01235 Sodium:alanine symporter family AVS56_RS11620 PF05872 Bacterial protein of unknown function (DUF853) AVS56_RS11625 PF01709 Transcriptional regulator AVS56_RS11630 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVS56_RS11630 PF02843 Phosphoribosylglycinamide synthetase, C domain AVS56_RS11630 PF02844 Phosphoribosylglycinamide synthetase, N domain AVS56_RS11635 PF01218 Coproporphyrinogen III oxidase AVS56_RS11640 PF01467 Cytidylyltransferase-like AVS56_RS11650 PF02590 Predicted SPOUT methyltransferase AVS56_RS11655 PF02545 Maf-like protein AVS56_RS11660 PF03212 Pertactin AVS56_RS11660 PF03797 Autotransporter beta-domain AVS56_RS11700 PF10150 Ribonuclease E/G family AVS56_RS11700 PF00575 S1 RNA binding domain AVS56_RS11705 PF00800 Prephenate dehydratase AVS56_RS11705 PF01842 ACT domain AVS56_RS11715 PF07690 Major Facilitator Superfamily AVS56_RS11720 PF00005 ABC transporter AVS56_RS11720 PF00664 ABC transporter transmembrane region AVS56_RS11725 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVS56_RS11735 PF03692 Putative zinc- or iron-chelating domain AVS56_RS11750 PF00884 Sulfatase AVS56_RS11755 PF13439 Glycosyltransferase Family 4 AVS56_RS11755 PF00534 Glycosyl transferases group 1 AVS56_RS11760 PF00535 Glycosyl transferase family 2 AVS56_RS11765 PF01522 Polysaccharide deacetylase AVS56_RS11770 PF00534 Glycosyl transferases group 1 AVS56_RS11770 PF13439 Glycosyltransferase Family 4 AVS56_RS11775 PF02811 PHP domain AVS56_RS11775 PF01336 OB-fold nucleic acid binding domain AVS56_RS11775 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVS56_RS11775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVS56_RS11775 PF14579 Helix-hairpin-helix motif AVS56_RS11785 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AVS56_RS11785 PF00271 Helicase conserved C-terminal domain AVS56_RS11785 PF04408 Helicase associated domain (HA2) AVS56_RS11785 PF00270 DEAD/DEAH box helicase AVS56_RS11785 PF11898 Domain of unknown function (DUF3418) AVS56_RS11790 PF00696 Amino acid kinase family AVS56_RS11790 PF00583 Acetyltransferase (GNAT) family AVS56_RS11795 PF04362 Bacterial Fe(2+) trafficking AVS56_RS11800 PF05506 Domain of unknown function (DUF756) AVS56_RS11800 PF04185 Phosphoesterase family AVS56_RS11805 PF01895 PhoU domain AVS56_RS11810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVS56_RS11815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS11815 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS11815 PF18158 Adaptive response protein AidB N-terminal domain AVS56_RS11820 PF02646 RmuC family AVS56_RS11830 PF02245 Methylpurine-DNA glycosylase (MPG) AVS56_RS11840 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS11845 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS11850 PF08402 TOBE domain AVS56_RS11850 PF00005 ABC transporter AVS56_RS11855 PF13416 Bacterial extracellular solute-binding protein AVS56_RS11875 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS11885 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS11885 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS56_RS11905 PF00285 Citrate synthase, C-terminal domain AVS56_RS11910 PF03937 Flavinator of succinate dehydrogenase AVS56_RS11915 PF13085 2Fe-2S iron-sulfur cluster binding domain AVS56_RS11920 PF00890 FAD binding domain AVS56_RS11920 PF02910 Fumarate reductase flavoprotein C-term AVS56_RS11925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVS56_RS11930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVS56_RS11935 PF07702 UTRA domain AVS56_RS11935 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS11940 PF00056 lactate/malate dehydrogenase, NAD binding domain AVS56_RS11940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVS56_RS11950 PF00285 Citrate synthase, C-terminal domain AVS56_RS11955 PF00694 Aconitase C-terminal domain AVS56_RS11955 PF00330 Aconitase family (aconitate hydratase) AVS56_RS11960 PF04303 PrpF protein AVS56_RS11965 PF03972 MmgE/PrpD family AVS56_RS11970 PF03653 Uncharacterised protein family (UPF0093) AVS56_RS11975 PF01170 Putative RNA methylase family UPF0020 AVS56_RS11975 PF02926 THUMP domain AVS56_RS11995 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS11995 PF00501 AMP-binding enzyme AVS56_RS11995 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS56_RS12005 PF01430 Hsp33 protein AVS56_RS12030 PF00211 Adenylate and Guanylate cyclase catalytic domain AVS56_RS12035 PF04977 Septum formation initiator AVS56_RS12040 PF03952 Enolase, N-terminal domain AVS56_RS12040 PF00113 Enolase, C-terminal TIM barrel domain AVS56_RS12050 PF00793 DAHP synthetase I family AVS56_RS12055 PF00117 Glutamine amidotransferase class-I AVS56_RS12055 PF06418 CTP synthase N-terminus AVS56_RS12065 PF00557 Metallopeptidase family M24 AVS56_RS12065 PF01321 Creatinase/Prolidase N-terminal domain AVS56_RS12075 PF03576 Peptidase family S58 AVS56_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS12080 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS56_RS12085 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS12090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS12095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS12095 PF00005 ABC transporter AVS56_RS12100 PF01112 Asparaginase AVS56_RS12110 PF01144 Coenzyme A transferase AVS56_RS12130 PF16363 GDP-mannose 4,6 dehydratase AVS56_RS12145 PF01212 Beta-eliminating lyase AVS56_RS12150 PF00892 EamA-like transporter family AVS56_RS12155 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS12155 PF00501 AMP-binding enzyme AVS56_RS12155 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS56_RS12165 PF03928 Haem-degrading AVS56_RS12170 PF00501 AMP-binding enzyme AVS56_RS12170 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS56_RS12170 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS12175 PF00501 AMP-binding enzyme AVS56_RS12175 PF16177 Acetyl-coenzyme A synthetase N-terminus AVS56_RS12175 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS12180 PF00877 NlpC/P60 family AVS56_RS12195 PF03466 LysR substrate binding domain AVS56_RS12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS12200 PF00171 Aldehyde dehydrogenase family AVS56_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS12210 PF03466 LysR substrate binding domain AVS56_RS12220 PF02789 Cytosol aminopeptidase family, N-terminal domain AVS56_RS12220 PF00883 Cytosol aminopeptidase family, catalytic domain AVS56_RS12225 PF04364 DNA polymerase III chi subunit, HolC AVS56_RS12235 PF01027 Inhibitor of apoptosis-promoting Bax1 AVS56_RS12240 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS12250 PF00291 Pyridoxal-phosphate dependent enzyme AVS56_RS12260 PF11967 Recombination protein O N terminal AVS56_RS12260 PF02565 Recombination protein O C terminal AVS56_RS12265 PF01926 50S ribosome-binding GTPase AVS56_RS12265 PF07650 KH domain AVS56_RS12270 PF00035 Double-stranded RNA binding motif AVS56_RS12270 PF14622 Ribonuclease-III-like AVS56_RS12275 PF10502 Signal peptidase, peptidase S26 AVS56_RS12280 PF06421 GTP-binding protein LepA C-terminus AVS56_RS12280 PF00009 Elongation factor Tu GTP binding domain AVS56_RS12280 PF03144 Elongation factor Tu domain 2 AVS56_RS12280 PF00679 Elongation factor G C-terminus AVS56_RS12285 PF13180 PDZ domain AVS56_RS12300 PF08281 Sigma-70, region 4 AVS56_RS12300 PF04542 Sigma-70 region 2 AVS56_RS12310 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS56_RS12310 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS56_RS12315 PF00550 Phosphopantetheine attachment site AVS56_RS12325 PF00698 Acyl transferase domain AVS56_RS12330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVS56_RS12330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVS56_RS12335 PF02504 Fatty acid synthesis protein AVS56_RS12340 PF01783 Ribosomal L32p protein family AVS56_RS12345 PF02620 Large ribosomal RNA subunit accumulation protein YceD AVS56_RS12350 PF02545 Maf-like protein AVS56_RS12360 PF01510 N-acetylmuramoyl-L-alanine amidase AVS56_RS12365 PF12805 FUSC-like inner membrane protein yccS AVS56_RS12375 PF03883 Peroxide stress protein YaaA AVS56_RS12385 PF00106 short chain dehydrogenase AVS56_RS12390 PF02254 TrkA-N domain AVS56_RS12390 PF00999 Sodium/hydrogen exchanger family AVS56_RS12400 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AVS56_RS12410 PF04183 IucA / IucC family AVS56_RS12410 PF06276 Ferric iron reductase FhuF-like transporter AVS56_RS12430 PF07690 Major Facilitator Superfamily AVS56_RS12435 PF00593 TonB dependent receptor AVS56_RS12435 PF07660 Secretin and TonB N terminus short domain AVS56_RS12435 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS12450 PF17151 Periplasmic sensor domain AVS56_RS12450 PF00990 Diguanylate cyclase, GGDEF domain AVS56_RS12475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVS56_RS12475 PF02403 Seryl-tRNA synthetase N-terminal domain AVS56_RS12480 PF12002 MgsA AAA+ ATPase C terminal AVS56_RS12480 PF00004 ATPase family associated with various cellular activities (AAA) AVS56_RS12480 PF16193 AAA C-terminal domain AVS56_RS12485 PF03548 Outer membrane lipoprotein carrier protein LolA AVS56_RS12490 PF01580 FtsK/SpoIIIE family AVS56_RS12490 PF09397 Ftsk gamma domain AVS56_RS12490 PF17854 FtsK alpha domain AVS56_RS12490 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVS56_RS12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS12500 PF01713 Smr domain AVS56_RS12500 PF00488 MutS domain V AVS56_RS12505 PF00893 Small Multidrug Resistance protein AVS56_RS12515 PF00474 Sodium:solute symporter family AVS56_RS12530 PF03814 Potassium-transporting ATPase A subunit AVS56_RS12540 PF02669 K+-transporting ATPase, c chain AVS56_RS12545 PF13492 GAF domain AVS56_RS12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS12545 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS12545 PF02702 Osmosensitive K+ channel His kinase sensor domain AVS56_RS12545 PF13493 Domain of unknown function (DUF4118) AVS56_RS12550 PF00072 Response regulator receiver domain AVS56_RS12550 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS12570 PF00180 Isocitrate/isopropylmalate dehydrogenase AVS56_RS12585 PF00034 Cytochrome c AVS56_RS12595 PF17862 AAA+ lid domain AVS56_RS12595 PF01434 Peptidase family M41 AVS56_RS12595 PF00004 ATPase family associated with various cellular activities (AAA) AVS56_RS12615 PF00675 Insulinase (Peptidase family M16) AVS56_RS12615 PF05193 Peptidase M16 inactive domain AVS56_RS12620 PF00226 DnaJ domain AVS56_RS12620 PF00684 DnaJ central domain AVS56_RS12620 PF01556 DnaJ C terminal domain AVS56_RS12625 PF00012 Hsp70 protein AVS56_RS12635 PF01025 GrpE AVS56_RS12645 PF00762 Ferrochelatase AVS56_RS12650 PF01628 HrcA protein C terminal domain AVS56_RS12650 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AVS56_RS12655 PF01513 ATP-NAD kinase AVS56_RS12660 PF02463 RecF/RecN/SMC N terminal domain AVS56_RS12665 PF01475 Ferric uptake regulator family AVS56_RS12670 PF04355 SmpA / OmlA family AVS56_RS12675 PF01113 Dihydrodipicolinate reductase, N-terminus AVS56_RS12675 PF05173 Dihydrodipicolinate reductase, C-terminus AVS56_RS12680 PF01565 FAD binding domain AVS56_RS12680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVS56_RS12690 PF00561 alpha/beta hydrolase fold AVS56_RS12700 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS12705 PF00551 Formyl transferase AVS56_RS12715 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVS56_RS12715 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS12715 PF01571 Aminomethyltransferase folate-binding domain AVS56_RS12715 PF17806 Sarcosine oxidase A3 domain AVS56_RS12720 PF04267 Sarcosine oxidase, delta subunit family AVS56_RS12725 PF01266 FAD dependent oxidoreductase AVS56_RS12735 PF03466 LysR substrate binding domain AVS56_RS12735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS12740 PF02615 Malate/L-lactate dehydrogenase AVS56_RS12745 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVS56_RS12745 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVS56_RS12750 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS12770 PF00437 Type II/IV secretion system protein AVS56_RS12775 PF13629 Pilus formation protein N terminal region AVS56_RS12775 PF00263 Bacterial type II and III secretion system protein AVS56_RS12775 PF04972 BON domain AVS56_RS12810 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVS56_RS12815 PF00719 Inorganic pyrophosphatase AVS56_RS12835 PF03900 Porphobilinogen deaminase, C-terminal domain AVS56_RS12835 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVS56_RS12840 PF03741 Integral membrane protein TerC family AVS56_RS12845 PF03741 Integral membrane protein TerC family AVS56_RS12850 PF00549 CoA-ligase AVS56_RS12850 PF02629 CoA binding domain AVS56_RS12855 PF08442 ATP-grasp domain AVS56_RS12855 PF00549 CoA-ligase AVS56_RS12865 PF01717 Cobalamin-independent synthase, Catalytic domain AVS56_RS12865 PF08267 Cobalamin-independent synthase, N-terminal domain AVS56_RS12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS12870 PF03466 LysR substrate binding domain AVS56_RS12875 PF02631 RecX family AVS56_RS12880 PF00154 recA bacterial DNA recombination protein AVS56_RS12885 PF00072 Response regulator receiver domain AVS56_RS12885 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS12890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS12890 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS12895 PF08946 Osmosensory transporter coiled coil AVS56_RS12895 PF00083 Sugar (and other) transporter AVS56_RS12900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS56_RS12900 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS12900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS56_RS12905 PF08402 TOBE domain AVS56_RS12905 PF00005 ABC transporter AVS56_RS12910 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS12920 PF00106 short chain dehydrogenase AVS56_RS12940 PF03466 LysR substrate binding domain AVS56_RS12940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS12945 PF02515 CoA-transferase family III AVS56_RS12955 PF04381 Putative exonuclease, RdgC AVS56_RS12960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVS56_RS12960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVS56_RS12980 PF04231 Endonuclease I AVS56_RS13035 PF00216 Bacterial DNA-binding protein AVS56_RS13040 PF03483 B3/4 domain AVS56_RS13040 PF03484 tRNA synthetase B5 domain AVS56_RS13040 PF03147 Ferredoxin-fold anticodon binding domain AVS56_RS13040 PF01588 Putative tRNA binding domain AVS56_RS13040 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVS56_RS13045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVS56_RS13045 PF01409 tRNA synthetases class II core domain (F) AVS56_RS13050 PF00453 Ribosomal protein L20 AVS56_RS13055 PF01632 Ribosomal protein L35 AVS56_RS13070 PF00692 dUTPase AVS56_RS13080 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS13080 PF00155 Aminotransferase class I and II AVS56_RS13095 PF13847 Methyltransferase domain AVS56_RS13110 PF09335 SNARE associated Golgi protein AVS56_RS13140 PF00356 Bacterial regulatory proteins, lacI family AVS56_RS13145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS13145 PF00005 ABC transporter AVS56_RS13150 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS56_RS13150 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS13155 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS13160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS13165 PF07687 Peptidase dimerisation domain AVS56_RS13165 PF01546 Peptidase family M20/M25/M40 AVS56_RS13175 PF01810 LysE type translocator AVS56_RS13185 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS13185 PF00155 Aminotransferase class I and II AVS56_RS13190 PF07690 Major Facilitator Superfamily AVS56_RS13195 PF08240 Alcohol dehydrogenase GroES-like domain AVS56_RS13195 PF00107 Zinc-binding dehydrogenase AVS56_RS13210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS13210 PF03466 LysR substrate binding domain AVS56_RS13215 PF12833 Helix-turn-helix domain AVS56_RS13215 PF01965 DJ-1/PfpI family AVS56_RS13220 PF12706 Beta-lactamase superfamily domain AVS56_RS13240 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVS56_RS13240 PF00753 Metallo-beta-lactamase superfamily AVS56_RS13240 PF10996 Beta-Casp domain AVS56_RS13245 PF01740 STAS domain AVS56_RS13245 PF00916 Sulfate permease family AVS56_RS13255 PF01965 DJ-1/PfpI family AVS56_RS13280 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS13285 PF00005 ABC transporter AVS56_RS13295 PF01979 Amidohydrolase family AVS56_RS13310 PF07690 Major Facilitator Superfamily AVS56_RS13320 PF13657 HipA N-terminal domain AVS56_RS13320 PF07804 HipA-like C-terminal domain AVS56_RS13335 PF02540 NAD synthase AVS56_RS13335 PF00958 GMP synthase C terminal domain AVS56_RS13335 PF00117 Glutamine amidotransferase class-I AVS56_RS13340 PF00478 IMP dehydrogenase / GMP reductase domain AVS56_RS13340 PF00571 CBS domain AVS56_RS13380 PF00149 Calcineurin-like phosphoesterase AVS56_RS13380 PF12320 Type 5 capsule protein repressor C-terminal domain AVS56_RS13385 PF01266 FAD dependent oxidoreductase AVS56_RS13390 PF01037 Lrp/AsnC ligand binding domain AVS56_RS13415 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS13425 PF00005 ABC transporter AVS56_RS13425 PF17912 MalK OB fold domain AVS56_RS13430 PF17912 MalK OB fold domain AVS56_RS13430 PF00005 ABC transporter AVS56_RS13435 PF00455 DeoR C terminal sensor domain AVS56_RS13435 PF08220 DeoR-like helix-turn-helix domain AVS56_RS13440 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVS56_RS13440 PF01266 FAD dependent oxidoreductase AVS56_RS13455 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS13460 PF00890 FAD binding domain AVS56_RS13460 PF14537 Cytochrome c3 AVS56_RS13485 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS13490 PF00701 Dihydrodipicolinate synthetase family AVS56_RS13510 PF00472 RF-1 domain AVS56_RS13520 PF01242 6-pyruvoyl tetrahydropterin synthase AVS56_RS13525 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS13530 PF00596 Class II Aldolase and Adducin N-terminal domain AVS56_RS13555 PF13332 Hemagglutinin repeat AVS56_RS13555 PF05594 Haemagluttinin repeat AVS56_RS13555 PF13018 Extended Signal Peptide of Type V secretion system AVS56_RS13555 PF05860 haemagglutination activity domain AVS56_RS13560 PF02769 AIR synthase related protein, C-terminal domain AVS56_RS13560 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVS56_RS13560 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AVS56_RS13565 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS56_RS13570 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVS56_RS13570 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS13575 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS13595 PF16970 Type-1 fimbrial protein, A AVS56_RS13600 PF14535 AMP-binding enzyme C-terminal domain AVS56_RS13600 PF00501 AMP-binding enzyme AVS56_RS13605 PF03061 Thioesterase superfamily AVS56_RS13610 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS13615 PF00171 Aldehyde dehydrogenase family AVS56_RS13625 PF00970 Oxidoreductase FAD-binding domain AVS56_RS13625 PF00175 Oxidoreductase NAD-binding domain AVS56_RS13625 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS13630 PF01883 Iron-sulfur cluster assembly protein AVS56_RS13635 PF05138 Phenylacetic acid catabolic protein AVS56_RS13640 PF06243 Phenylacetic acid degradation B AVS56_RS13645 PF05138 Phenylacetic acid catabolic protein AVS56_RS13650 PF08223 PaaX-like protein C-terminal domain AVS56_RS13650 PF07848 PaaX-like protein AVS56_RS13655 PF03853 YjeF-related protein N-terminus AVS56_RS13660 PF00929 Exonuclease AVS56_RS13665 PF01435 Peptidase family M48 AVS56_RS13670 PF03193 RsgA GTPase AVS56_RS13675 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS56_RS13675 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS13680 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS13685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS13695 PF03466 LysR substrate binding domain AVS56_RS13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS13720 PF00543 Nitrogen regulatory protein P-II AVS56_RS13725 PF02540 NAD synthase AVS56_RS13725 PF00795 Carbon-nitrogen hydrolase AVS56_RS13730 PF00924 Mechanosensitive ion channel AVS56_RS13735 PF00206 Lyase AVS56_RS13735 PF14698 Argininosuccinate lyase C-terminal AVS56_RS13755 PF04055 Radical SAM superfamily AVS56_RS13755 PF06463 Molybdenum Cofactor Synthesis C AVS56_RS13760 PF03454 MoeA C-terminal region (domain IV) AVS56_RS13760 PF03453 MoeA N-terminal region (domain I and II) AVS56_RS13760 PF00994 Probable molybdopterin binding domain AVS56_RS13765 PF00994 Probable molybdopterin binding domain AVS56_RS13770 PF02391 MoaE protein AVS56_RS13780 PF01967 MoaC family AVS56_RS13790 PF01738 Dienelactone hydrolase family AVS56_RS13800 PF08534 Redoxin AVS56_RS13815 PF06968 Biotin and Thiamin Synthesis associated domain AVS56_RS13815 PF04055 Radical SAM superfamily AVS56_RS13835 PF00403 Heavy-metal-associated domain AVS56_RS13840 PF13411 MerR HTH family regulatory protein AVS56_RS13865 PF02104 SURF1 family AVS56_RS13870 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVS56_RS13875 PF00510 Cytochrome c oxidase subunit III AVS56_RS13880 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS56_RS13890 PF00083 Sugar (and other) transporter AVS56_RS13890 PF07690 Major Facilitator Superfamily AVS56_RS13905 PF04380 Membrane fusogenic activity AVS56_RS13910 PF00543 Nitrogen regulatory protein P-II AVS56_RS13920 PF03797 Autotransporter beta-domain AVS56_RS13920 PF03212 Pertactin AVS56_RS13930 PF00440 Bacterial regulatory proteins, tetR family AVS56_RS13935 PF07690 Major Facilitator Superfamily AVS56_RS13940 PF00005 ABC transporter AVS56_RS13945 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS13945 PF00005 ABC transporter AVS56_RS13950 PF11862 Domain of unknown function (DUF3382) AVS56_RS13950 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS13955 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS13960 PF13458 Periplasmic binding protein AVS56_RS13970 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVS56_RS13970 PF14850 DNA-binding domain of Proline dehydrogenase AVS56_RS13970 PF01619 Proline dehydrogenase AVS56_RS13970 PF00171 Aldehyde dehydrogenase family AVS56_RS13980 PF02470 MlaD protein AVS56_RS13985 PF04403 Paraquat-inducible protein A AVS56_RS13990 PF07724 AAA domain (Cdc48 subfamily) AVS56_RS13990 PF00004 ATPase family associated with various cellular activities (AAA) AVS56_RS13990 PF17871 AAA lid domain AVS56_RS13990 PF02861 Clp amino terminal domain, pathogenicity island component AVS56_RS13990 PF10431 C-terminal, D2-small domain, of ClpB protein AVS56_RS13995 PF00912 Transglycosylase AVS56_RS13995 PF06832 Penicillin-Binding Protein C-terminus Family AVS56_RS13995 PF00905 Penicillin binding protein transpeptidase domain AVS56_RS14000 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AVS56_RS14000 PF01835 MG2 domain AVS56_RS14000 PF17962 Bacterial macroglobulin domain 6 AVS56_RS14000 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AVS56_RS14000 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AVS56_RS14000 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AVS56_RS14000 PF00207 Alpha-2-macroglobulin family AVS56_RS14000 PF07703 Alpha-2-macroglobulin bait region domain AVS56_RS14005 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVS56_RS14010 PF00313 'Cold-shock' DNA-binding domain AVS56_RS14020 PF02803 Thiolase, C-terminal domain AVS56_RS14020 PF00108 Thiolase, N-terminal domain AVS56_RS14025 PF00654 Voltage gated chloride channel AVS56_RS14030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVS56_RS14030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVS56_RS14035 PF13742 OB-fold nucleic acid binding domain AVS56_RS14035 PF02601 Exonuclease VII, large subunit AVS56_RS14045 PF01618 MotA/TolQ/ExbB proton channel family AVS56_RS14050 PF02472 Biopolymer transport protein ExbD/TolR AVS56_RS14055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVS56_RS14060 PF03966 Trm112p-like protein AVS56_RS14065 PF02348 Cytidylyltransferase AVS56_RS14070 PF05191 Adenylate kinase, active site lid AVS56_RS14075 PF00106 short chain dehydrogenase AVS56_RS14080 PF03023 Lipid II flippase MurJ AVS56_RS14090 PF01649 Ribosomal protein S20 AVS56_RS14095 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS56_RS14110 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS14120 PF02615 Malate/L-lactate dehydrogenase AVS56_RS14135 PF14821 Threonine synthase N terminus AVS56_RS14135 PF00291 Pyridoxal-phosphate dependent enzyme AVS56_RS14140 PF03447 Homoserine dehydrogenase, NAD binding domain AVS56_RS14140 PF01842 ACT domain AVS56_RS14140 PF00742 Homoserine dehydrogenase AVS56_RS14145 PF00155 Aminotransferase class I and II AVS56_RS14150 PF04430 Protein of unknown function (DUF498/DUF598) AVS56_RS14155 PF00578 AhpC/TSA family AVS56_RS14160 PF02562 PhoH-like protein AVS56_RS14160 PF13638 PIN domain AVS56_RS14165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVS56_RS14170 PF13593 SBF-like CPA transporter family (DUF4137) AVS56_RS14175 PF00772 DnaB-like helicase N terminal domain AVS56_RS14175 PF03796 DnaB-like helicase C terminal domain AVS56_RS14185 PF01281 Ribosomal protein L9, N-terminal domain AVS56_RS14185 PF03948 Ribosomal protein L9, C-terminal domain AVS56_RS14190 PF01084 Ribosomal protein S18 AVS56_RS14200 PF01250 Ribosomal protein S6 AVS56_RS14205 PF02649 Type I GTP cyclohydrolase folE2 AVS56_RS14210 PF02779 Transketolase, pyrimidine binding domain AVS56_RS14210 PF02780 Transketolase, C-terminal domain AVS56_RS14210 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVS56_RS14215 PF00348 Polyprenyl synthetase AVS56_RS14220 PF02609 Exonuclease VII small subunit AVS56_RS14230 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS14250 PF01769 Divalent cation transporter AVS56_RS14250 PF00571 CBS domain AVS56_RS14250 PF03448 MgtE intracellular N domain AVS56_RS14255 PF03061 Thioesterase superfamily AVS56_RS14260 PF03601 Conserved hypothetical protein 698 AVS56_RS14265 PF03466 LysR substrate binding domain AVS56_RS14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS14270 PF01546 Peptidase family M20/M25/M40 AVS56_RS14270 PF07687 Peptidase dimerisation domain AVS56_RS14275 PF00501 AMP-binding enzyme AVS56_RS14275 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS14290 PF00459 Inositol monophosphatase family AVS56_RS14300 PF01055 Glycosyl hydrolases family 31 AVS56_RS14300 PF13802 Galactose mutarotase-like AVS56_RS14305 PF09383 NIL domain AVS56_RS14305 PF00005 ABC transporter AVS56_RS14310 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS14315 PF03180 NLPA lipoprotein AVS56_RS14330 PF00465 Iron-containing alcohol dehydrogenase AVS56_RS14360 PF07729 FCD domain AVS56_RS14360 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS14365 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS14385 PF14785 Maltose transport system permease protein MalF P2 domain AVS56_RS14385 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS14390 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS14395 PF00005 ABC transporter AVS56_RS14395 PF08402 TOBE domain AVS56_RS14400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS14400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS56_RS14410 PF01547 Bacterial extracellular solute-binding protein AVS56_RS14425 PF00376 MerR family regulatory protein AVS56_RS14425 PF09278 MerR, DNA binding AVS56_RS14430 PF03352 Methyladenine glycosylase AVS56_RS14435 PF05170 AsmA family AVS56_RS14445 PF00440 Bacterial regulatory proteins, tetR family AVS56_RS14510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS14510 PF03466 LysR substrate binding domain AVS56_RS14515 PF02548 Ketopantoate hydroxymethyltransferase AVS56_RS14520 PF13609 Gram-negative porin AVS56_RS14540 PF00083 Sugar (and other) transporter AVS56_RS14550 PF03466 LysR substrate binding domain AVS56_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS14555 PF00155 Aminotransferase class I and II AVS56_RS14560 PF01966 HD domain AVS56_RS14565 PF00403 Heavy-metal-associated domain AVS56_RS14585 PF08240 Alcohol dehydrogenase GroES-like domain AVS56_RS14585 PF00107 Zinc-binding dehydrogenase AVS56_RS14600 PF00005 ABC transporter AVS56_RS14605 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS14615 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS14615 PF00501 AMP-binding enzyme AVS56_RS14625 PF01037 Lrp/AsnC ligand binding domain AVS56_RS14625 PF13404 AsnC-type helix-turn-helix domain AVS56_RS14630 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS14635 PF00677 Lumazine binding domain AVS56_RS14640 PF01425 Amidase AVS56_RS14655 PF03466 LysR substrate binding domain AVS56_RS14655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS14660 PF07690 Major Facilitator Superfamily AVS56_RS14665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS56_RS14675 PF03466 LysR substrate binding domain AVS56_RS14675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS14690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVS56_RS14695 PF00005 ABC transporter AVS56_RS14710 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS14715 PF01042 Endoribonuclease L-PSP AVS56_RS14720 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS14720 PF00501 AMP-binding enzyme AVS56_RS14730 PF01614 Bacterial transcriptional regulator AVS56_RS14730 PF09339 IclR helix-turn-helix domain AVS56_RS14745 PF00005 ABC transporter AVS56_RS14750 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS14765 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS14770 PF02515 CoA-transferase family III AVS56_RS14775 PF01425 Amidase AVS56_RS14785 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS14785 PF07729 FCD domain AVS56_RS14795 PF01594 AI-2E family transporter AVS56_RS14815 PF01322 Cytochrome C' AVS56_RS14820 PF08328 Adenylosuccinate lyase C-terminal AVS56_RS14820 PF00206 Lyase AVS56_RS14825 PF00043 Glutathione S-transferase, C-terminal domain AVS56_RS14825 PF13417 Glutathione S-transferase, N-terminal domain AVS56_RS14830 PF01925 Sulfite exporter TauE/SafE AVS56_RS14840 PF03466 LysR substrate binding domain AVS56_RS14840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS14845 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS14855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVS56_RS14855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVS56_RS14860 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVS56_RS14865 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVS56_RS14870 PF02233 NAD(P) transhydrogenase beta subunit AVS56_RS14880 PF00593 TonB dependent receptor AVS56_RS14880 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS14885 PF00756 Putative esterase AVS56_RS14890 PF13183 4Fe-4S dicluster domain AVS56_RS14890 PF02754 Cysteine-rich domain AVS56_RS14895 PF01565 FAD binding domain AVS56_RS14900 PF01565 FAD binding domain AVS56_RS14900 PF02913 FAD linked oxidases, C-terminal domain AVS56_RS14905 PF02913 FAD linked oxidases, C-terminal domain AVS56_RS14905 PF01565 FAD binding domain AVS56_RS14910 PF13332 Hemagglutinin repeat AVS56_RS14910 PF05860 haemagglutination activity domain AVS56_RS14910 PF13332 Hemagglutinin repeat AVS56_RS14910 PF05594 Haemagluttinin repeat AVS56_RS14910 PF13018 Extended Signal Peptide of Type V secretion system AVS56_RS14910 PF13018 Extended Signal Peptide of Type V secretion system AVS56_RS14910 PF05860 haemagglutination activity domain AVS56_RS14910 PF05594 Haemagluttinin repeat AVS56_RS14915 PF00793 DAHP synthetase I family AVS56_RS14920 PF01523 Putative modulator of DNA gyrase AVS56_RS14925 PF00795 Carbon-nitrogen hydrolase AVS56_RS14945 PF08281 Sigma-70, region 4 AVS56_RS14945 PF04542 Sigma-70 region 2 AVS56_RS14955 PF04461 Protein of unknown function (DUF520) AVS56_RS14970 PF01551 Peptidase family M23 AVS56_RS14970 PF01476 LysM domain AVS56_RS14985 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS14985 PF00593 TonB dependent receptor AVS56_RS15000 PF05114 Protein of unknown function (DUF692) AVS56_RS15020 PF01022 Bacterial regulatory protein, arsR family AVS56_RS15025 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVS56_RS15030 PF00510 Cytochrome c oxidase subunit III AVS56_RS15035 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS56_RS15040 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVS56_RS15040 PF06481 COX Aromatic Rich Motif AVS56_RS15045 PF00072 Response regulator receiver domain AVS56_RS15060 PF02678 Pirin AVS56_RS15060 PF05726 Pirin C-terminal cupin domain AVS56_RS15080 PF02515 CoA-transferase family III AVS56_RS15085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS15085 PF03466 LysR substrate binding domain AVS56_RS15090 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS15100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS15100 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS15100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS15100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS15100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS15100 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS15115 PF01872 RibD C-terminal domain AVS56_RS15115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVS56_RS15130 PF03477 ATP cone domain AVS56_RS15135 PF00464 Serine hydroxymethyltransferase AVS56_RS15145 PF00579 tRNA synthetases class I (W and Y) AVS56_RS15145 PF01479 S4 domain AVS56_RS15155 PF08460 Bacterial SH3 domain AVS56_RS15155 PF01551 Peptidase family M23 AVS56_RS15160 PF03702 Anhydro-N-acetylmuramic acid kinase AVS56_RS15165 PF01521 Iron-sulphur cluster biosynthesis AVS56_RS15175 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVS56_RS15175 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVS56_RS15180 PF00380 Ribosomal protein S9/S16 AVS56_RS15185 PF00572 Ribosomal protein L13 AVS56_RS15190 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS15195 PF01523 Putative modulator of DNA gyrase AVS56_RS15200 PF04751 Protein of unknown function (DUF615) AVS56_RS15205 PF02230 Phospholipase/Carboxylesterase AVS56_RS15215 PF00005 ABC transporter AVS56_RS15220 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS15225 PF00857 Isochorismatase family AVS56_RS15230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS56_RS15235 PF00270 DEAD/DEAH box helicase AVS56_RS15235 PF03880 DbpA RNA binding domain AVS56_RS15235 PF00271 Helicase conserved C-terminal domain AVS56_RS15245 PF07729 FCD domain AVS56_RS15245 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS15260 PF13380 CoA binding domain AVS56_RS15260 PF00583 Acetyltransferase (GNAT) family AVS56_RS15260 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS56_RS15265 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVS56_RS15280 PF01037 Lrp/AsnC ligand binding domain AVS56_RS15295 PF00317 Ribonucleotide reductase, all-alpha domain AVS56_RS15295 PF02867 Ribonucleotide reductase, barrel domain AVS56_RS15295 PF03477 ATP cone domain AVS56_RS15300 PF00268 Ribonucleotide reductase, small chain AVS56_RS15315 PF00501 AMP-binding enzyme AVS56_RS15315 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS15320 PF03062 MBOAT, membrane-bound O-acyltransferase family AVS56_RS15345 PF00294 pfkB family carbohydrate kinase AVS56_RS15360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS56_RS15360 PF00289 Biotin carboxylase, N-terminal domain AVS56_RS15360 PF02785 Biotin carboxylase C-terminal domain AVS56_RS15365 PF00364 Biotin-requiring enzyme AVS56_RS15370 PF01220 Dehydroquinase class II AVS56_RS15375 PF08534 Redoxin AVS56_RS15380 PF01225 Mur ligase family, catalytic domain AVS56_RS15380 PF02875 Mur ligase family, glutamate ligase domain AVS56_RS15380 PF08245 Mur ligase middle domain AVS56_RS15385 PF05728 Uncharacterised protein family (UPF0227) AVS56_RS15390 PF00773 RNB domain AVS56_RS15400 PF01488 Shikimate / quinate 5-dehydrogenase AVS56_RS15400 PF08501 Shikimate dehydrogenase substrate binding domain AVS56_RS15400 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVS56_RS15415 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AVS56_RS15425 PF01037 Lrp/AsnC ligand binding domain AVS56_RS15430 PF01266 FAD dependent oxidoreductase AVS56_RS15435 PF00106 short chain dehydrogenase AVS56_RS15445 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS15455 PF07516 SecA Wing and Scaffold domain AVS56_RS15455 PF02810 SEC-C motif AVS56_RS15455 PF07517 SecA DEAD-like domain AVS56_RS15455 PF01043 SecA preprotein cross-linking domain AVS56_RS15460 PF08525 Opacity-associated protein A N-terminal motif AVS56_RS15460 PF01551 Peptidase family M23 AVS56_RS15460 PF01476 LysM domain AVS56_RS15470 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVS56_RS15475 PF00091 Tubulin/FtsZ family, GTPase domain AVS56_RS15475 PF12327 FtsZ family, C-terminal domain AVS56_RS15480 PF02491 SHS2 domain inserted in FTSA AVS56_RS15485 PF08478 POTRA domain, FtsQ-type AVS56_RS15485 PF03799 Cell division protein FtsQ AVS56_RS15490 PF07478 D-ala D-ala ligase C-terminus AVS56_RS15490 PF01820 D-ala D-ala ligase N-terminus AVS56_RS15495 PF08245 Mur ligase middle domain AVS56_RS15495 PF02875 Mur ligase family, glutamate ligase domain AVS56_RS15495 PF01225 Mur ligase family, catalytic domain AVS56_RS15500 PF04101 Glycosyltransferase family 28 C-terminal domain AVS56_RS15500 PF03033 Glycosyltransferase family 28 N-terminal domain AVS56_RS15505 PF01098 Cell cycle protein AVS56_RS15510 PF08245 Mur ligase middle domain AVS56_RS15510 PF02875 Mur ligase family, glutamate ligase domain AVS56_RS15515 PF00953 Glycosyl transferase family 4 AVS56_RS15520 PF08245 Mur ligase middle domain AVS56_RS15520 PF02875 Mur ligase family, glutamate ligase domain AVS56_RS15525 PF03717 Penicillin-binding Protein dimerisation domain AVS56_RS15525 PF00905 Penicillin binding protein transpeptidase domain AVS56_RS15530 PF04999 Cell division protein FtsL AVS56_RS15535 PF01795 MraW methylase family AVS56_RS15540 PF02381 MraZ protein, putative antitoxin-like AVS56_RS15550 PF12848 ABC transporter AVS56_RS15550 PF00005 ABC transporter AVS56_RS15550 PF16326 ABC transporter C-terminal domain AVS56_RS15555 PF01979 Amidohydrolase family AVS56_RS15560 PF07687 Peptidase dimerisation domain AVS56_RS15560 PF01546 Peptidase family M20/M25/M40 AVS56_RS15600 PF01037 Lrp/AsnC ligand binding domain AVS56_RS15605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVS56_RS15610 PF01625 Peptide methionine sulfoxide reductase AVS56_RS15615 PF00034 Cytochrome c AVS56_RS15620 PF00920 Dehydratase family AVS56_RS15625 PF01790 Prolipoprotein diacylglyceryl transferase AVS56_RS15670 PF01970 Tripartite tricarboxylate transporter TctA family AVS56_RS15680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVS56_RS15680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVS56_RS15685 PF02525 Flavodoxin-like fold AVS56_RS15700 PF01923 Cobalamin adenosyltransferase AVS56_RS15710 PF07724 AAA domain (Cdc48 subfamily) AVS56_RS15710 PF00004 ATPase family associated with various cellular activities (AAA) AVS56_RS15710 PF10431 C-terminal, D2-small domain, of ClpB protein AVS56_RS15715 PF00227 Proteasome subunit AVS56_RS15720 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVS56_RS15725 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVS56_RS15725 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS56_RS15730 PF01475 Ferric uptake regulator family AVS56_RS15740 PF00005 ABC transporter AVS56_RS15745 PF00950 ABC 3 transport family AVS56_RS15750 PF01297 Zinc-uptake complex component A periplasmic AVS56_RS15760 PF03824 High-affinity nickel-transport protein AVS56_RS15765 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS15765 PF00593 TonB dependent receptor AVS56_RS15770 PF00589 Phage integrase family AVS56_RS15770 PF02899 Phage integrase, N-terminal SAM-like domain AVS56_RS15780 PF01678 Diaminopimelate epimerase AVS56_RS15785 PF03279 Bacterial lipid A biosynthesis acyltransferase AVS56_RS15795 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVS56_RS15795 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVS56_RS15795 PF02772 S-adenosylmethionine synthetase, central domain AVS56_RS15805 PF00534 Glycosyl transferases group 1 AVS56_RS15805 PF13439 Glycosyltransferase Family 4 AVS56_RS15810 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVS56_RS15810 PF05221 S-adenosyl-L-homocysteine hydrolase AVS56_RS15815 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AVS56_RS15820 PF02219 Methylenetetrahydrofolate reductase AVS56_RS15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS15830 PF03466 LysR substrate binding domain AVS56_RS15835 PF00850 Histone deacetylase domain AVS56_RS15840 PF00083 Sugar (and other) transporter AVS56_RS15840 PF07690 Major Facilitator Superfamily AVS56_RS15850 PF14718 Soluble lytic murein transglycosylase L domain AVS56_RS15850 PF01464 Transglycosylase SLT domain AVS56_RS15855 PF01743 Poly A polymerase head domain AVS56_RS15855 PF12627 Probable RNA and SrmB- binding site of polymerase A AVS56_RS15865 PF00270 DEAD/DEAH box helicase AVS56_RS15865 PF00271 Helicase conserved C-terminal domain AVS56_RS15870 PF03167 Uracil DNA glycosylase superfamily AVS56_RS15885 PF13091 PLD-like domain AVS56_RS15890 PF03459 TOBE domain AVS56_RS15890 PF00005 ABC transporter AVS56_RS15895 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS15905 PF00561 alpha/beta hydrolase fold AVS56_RS15950 PF01810 LysE type translocator AVS56_RS15960 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS15975 PF01266 FAD dependent oxidoreductase AVS56_RS16005 PF17938 Tetracyclin repressor-like, C-terminal domain AVS56_RS16005 PF00440 Bacterial regulatory proteins, tetR family AVS56_RS16015 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS16025 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS16025 PF00072 Response regulator receiver domain AVS56_RS16035 PF12951 Passenger-associated-transport-repeat AVS56_RS16050 PF00580 UvrD/REP helicase N-terminal domain AVS56_RS16050 PF13361 UvrD-like helicase C-terminal domain AVS56_RS16085 PF13175 AAA ATPase domain AVS56_RS16090 PF01555 DNA methylase AVS56_RS16110 PF00589 Phage integrase family AVS56_RS16110 PF13356 Arm DNA-binding domain AVS56_RS16115 PF06071 Protein of unknown function (DUF933) AVS56_RS16115 PF01926 50S ribosome-binding GTPase AVS56_RS16125 PF01195 Peptidyl-tRNA hydrolase AVS56_RS16130 PF14693 Ribosomal protein TL5, C-terminal domain AVS56_RS16130 PF01386 Ribosomal L25p family AVS56_RS16135 PF14572 Phosphoribosyl synthetase-associated domain AVS56_RS16135 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVS56_RS16145 PF08544 GHMP kinases C terminal AVS56_RS16145 PF00288 GHMP kinases N terminal domain AVS56_RS16150 PF03550 Outer membrane lipoprotein LolB AVS56_RS16160 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVS56_RS16160 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVS56_RS16160 PF06827 Zinc finger found in FPG and IleRS AVS56_RS16170 PF01494 FAD binding domain AVS56_RS16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS16180 PF03466 LysR substrate binding domain AVS56_RS16185 PF04209 homogentisate 1,2-dioxygenase AVS56_RS16195 PF00884 Sulfatase AVS56_RS16200 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS16200 PF08521 Two-component sensor kinase N-terminal AVS56_RS16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS16205 PF00072 Response regulator receiver domain AVS56_RS16205 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS16210 PF01565 FAD binding domain AVS56_RS16210 PF02913 FAD linked oxidases, C-terminal domain AVS56_RS16220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVS56_RS16220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVS56_RS16220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVS56_RS16220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVS56_RS16225 PF00342 Phosphoglucose isomerase AVS56_RS16230 PF00534 Glycosyl transferases group 1 AVS56_RS16230 PF13477 Glycosyl transferase 4-like AVS56_RS16235 PF13439 Glycosyltransferase Family 4 AVS56_RS16235 PF00534 Glycosyl transferases group 1 AVS56_RS16240 PF00534 Glycosyl transferases group 1 AVS56_RS16240 PF13439 Glycosyltransferase Family 4 AVS56_RS16245 PF00733 Asparagine synthase AVS56_RS16245 PF13537 Glutamine amidotransferase domain AVS56_RS16250 PF13439 Glycosyltransferase Family 4 AVS56_RS16250 PF00534 Glycosyl transferases group 1 AVS56_RS16255 PF03023 Lipid II flippase MurJ AVS56_RS16260 PF01370 NAD dependent epimerase/dehydratase family AVS56_RS16265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS56_RS16265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS56_RS16265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS56_RS16270 PF00953 Glycosyl transferase family 4 AVS56_RS16275 PF03232 Ubiquinone biosynthesis protein COQ7 AVS56_RS16285 PF00303 Thymidylate synthase AVS56_RS16290 PF00186 Dihydrofolate reductase AVS56_RS16295 PF00155 Aminotransferase class I and II AVS56_RS16295 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS16300 PF00202 Aminotransferase class-III AVS56_RS16310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS16315 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS16320 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS16330 PF07364 Metallopeptidase family M81 AVS56_RS16330 PF07171 MlrC C-terminus AVS56_RS16340 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVS56_RS16345 PF01730 UreF AVS56_RS16350 PF05194 UreE urease accessory protein, C-terminal domain AVS56_RS16350 PF02814 UreE urease accessory protein, N-terminal domain AVS56_RS16355 PF01979 Amidohydrolase family AVS56_RS16355 PF00449 Urease alpha-subunit, N-terminal domain AVS56_RS16360 PF00699 Urease beta subunit AVS56_RS16365 PF04955 HupE / UreJ protein AVS56_RS16370 PF00547 Urease, gamma subunit AVS56_RS16375 PF01774 UreD urease accessory protein AVS56_RS16380 PF09278 MerR, DNA binding AVS56_RS16380 PF00376 MerR family regulatory protein AVS56_RS16385 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS16400 PF07702 UTRA domain AVS56_RS16400 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS16405 PF07476 Methylaspartate ammonia-lyase C-terminus AVS56_RS16405 PF05034 Methylaspartate ammonia-lyase N-terminus AVS56_RS16410 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS16425 PF04293 SpoVR like protein AVS56_RS16430 PF04285 Protein of unknown function (DUF444) AVS56_RS16450 PF02515 CoA-transferase family III AVS56_RS16455 PF14535 AMP-binding enzyme C-terminal domain AVS56_RS16455 PF00501 AMP-binding enzyme AVS56_RS16460 PF00440 Bacterial regulatory proteins, tetR family AVS56_RS16460 PF08361 MAATS-type transcriptional repressor, C-terminal region AVS56_RS16465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS16465 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS16465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS16475 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS16480 PF00005 ABC transporter AVS56_RS16485 PF00005 ABC transporter AVS56_RS16485 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS16495 PF00106 short chain dehydrogenase AVS56_RS16500 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS16510 PF02803 Thiolase, C-terminal domain AVS56_RS16510 PF00108 Thiolase, N-terminal domain AVS56_RS16515 PF01575 MaoC like domain AVS56_RS16560 PF00732 GMC oxidoreductase AVS56_RS16560 PF05199 GMC oxidoreductase AVS56_RS16570 PF00075 RNase H AVS56_RS16575 PF08241 Methyltransferase domain AVS56_RS16580 PF00753 Metallo-beta-lactamase superfamily AVS56_RS16580 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVS56_RS16585 PF01464 Transglycosylase SLT domain AVS56_RS16585 PF01476 LysM domain AVS56_RS16605 PF04391 Protein of unknown function (DUF533) AVS56_RS16610 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS16625 PF00072 Response regulator receiver domain AVS56_RS16625 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS16630 PF13493 Domain of unknown function (DUF4118) AVS56_RS16630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS16630 PF02702 Osmosensitive K+ channel His kinase sensor domain AVS56_RS16640 PF01654 Cytochrome bd terminal oxidase subunit I AVS56_RS16645 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVS56_RS16645 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AVS56_RS16650 PF03775 Septum formation inhibitor MinC, C-terminal domain AVS56_RS16650 PF05209 Septum formation inhibitor MinC, N-terminal domain AVS56_RS16655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVS56_RS16660 PF03776 Septum formation topological specificity factor MinE AVS56_RS16680 PF12848 ABC transporter AVS56_RS16680 PF00005 ABC transporter AVS56_RS16695 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS16700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS16705 PF00535 Glycosyl transferase family 2 AVS56_RS16710 PF03466 LysR substrate binding domain AVS56_RS16710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS16720 PF17755 UvrA DNA-binding domain AVS56_RS16720 PF00005 ABC transporter AVS56_RS16720 PF17760 UvrA interaction domain AVS56_RS16725 PF04715 Anthranilate synthase component I, N terminal region AVS56_RS16725 PF00425 chorismate binding enzyme AVS56_RS16730 PF01063 Amino-transferase class IV AVS56_RS16745 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS16750 PF00501 AMP-binding enzyme AVS56_RS16750 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS16755 PF07702 UTRA domain AVS56_RS16755 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS16760 PF00899 ThiF family AVS56_RS16765 PF07690 Major Facilitator Superfamily AVS56_RS16775 PF01243 Pyridoxamine 5'-phosphate oxidase AVS56_RS16775 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVS56_RS16780 PF01613 Flavin reductase like domain AVS56_RS16790 PF00551 Formyl transferase AVS56_RS16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS16795 PF03466 LysR substrate binding domain AVS56_RS16800 PF18158 Adaptive response protein AidB N-terminal domain AVS56_RS16800 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS16800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS16820 PF00218 Indole-3-glycerol phosphate synthase AVS56_RS16825 PF00591 Glycosyl transferase family, a/b domain AVS56_RS16825 PF02885 Glycosyl transferase family, helical bundle domain AVS56_RS16830 PF00117 Glutamine amidotransferase class-I AVS56_RS16835 PF04715 Anthranilate synthase component I, N terminal region AVS56_RS16835 PF00425 chorismate binding enzyme AVS56_RS16840 PF13419 Haloacid dehalogenase-like hydrolase AVS56_RS16845 PF00834 Ribulose-phosphate 3 epimerase family AVS56_RS16850 PF04379 ApaG domain AVS56_RS16855 PF03562 MltA specific insert domain AVS56_RS16855 PF06725 3D domain AVS56_RS16860 PF01494 FAD binding domain AVS56_RS16865 PF13098 Thioredoxin-like domain AVS56_RS16865 PF10411 Disulfide bond isomerase protein N-terminus AVS56_RS16870 PF01842 ACT domain AVS56_RS16870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVS56_RS16870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVS56_RS16880 PF01171 PP-loop family AVS56_RS16890 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS16890 PF13192 Thioredoxin domain AVS56_RS16895 PF17820 PDZ domain AVS56_RS16895 PF13180 PDZ domain AVS56_RS16900 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS16925 PF00119 ATP synthase A chain AVS56_RS16930 PF00137 ATP synthase subunit C AVS56_RS16935 PF00430 ATP synthase B/B' CF(0) AVS56_RS16940 PF00213 ATP synthase delta (OSCP) subunit AVS56_RS16945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS56_RS16945 PF00306 ATP synthase alpha/beta chain, C terminal domain AVS56_RS16945 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS56_RS16950 PF00231 ATP synthase AVS56_RS16955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVS56_RS16955 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVS56_RS16960 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVS56_RS16970 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVS56_RS16975 PF00270 DEAD/DEAH box helicase AVS56_RS16975 PF17764 3′ DNA-binding domain (3′BD) AVS56_RS16975 PF18074 Primosomal protein N C-terminal domain AVS56_RS16975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVS56_RS16975 PF00271 Helicase conserved C-terminal domain AVS56_RS16980 PF13361 UvrD-like helicase C-terminal domain AVS56_RS16980 PF00580 UvrD/REP helicase N-terminal domain AVS56_RS16990 PF01546 Peptidase family M20/M25/M40 AVS56_RS16990 PF07687 Peptidase dimerisation domain AVS56_RS17000 PF00005 ABC transporter AVS56_RS17000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS17005 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS17005 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS56_RS17010 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS17030 PF01256 Carbohydrate kinase AVS56_RS17035 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS17040 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS17055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS17055 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS17055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS17060 PF02515 CoA-transferase family III AVS56_RS17065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS56_RS17065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS56_RS17065 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AVS56_RS17095 PF07731 Multicopper oxidase AVS56_RS17095 PF07732 Multicopper oxidase AVS56_RS17095 PF00394 Multicopper oxidase AVS56_RS17100 PF05275 Copper resistance protein B precursor (CopB) AVS56_RS17105 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS17105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS56_RS17105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS56_RS17110 PF02515 CoA-transferase family III AVS56_RS17115 PF09339 IclR helix-turn-helix domain AVS56_RS17115 PF01614 Bacterial transcriptional regulator AVS56_RS17120 PF05995 Cysteine dioxygenase type I AVS56_RS17125 PF01425 Amidase AVS56_RS17130 PF13458 Periplasmic binding protein AVS56_RS17155 PF13091 PLD-like domain AVS56_RS17160 PF03372 Endonuclease/Exonuclease/phosphatase family AVS56_RS17165 PF02938 GAD domain AVS56_RS17165 PF00152 tRNA synthetases class II (D, K and N) AVS56_RS17165 PF01336 OB-fold nucleic acid binding domain AVS56_RS17185 PF00732 GMC oxidoreductase AVS56_RS17185 PF05199 GMC oxidoreductase AVS56_RS17195 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS17195 PF00593 TonB dependent receptor AVS56_RS17200 PF01370 NAD dependent epimerase/dehydratase family AVS56_RS17200 PF02222 ATP-grasp domain AVS56_RS17205 PF00571 CBS domain AVS56_RS17205 PF01380 SIS domain AVS56_RS17225 PF00005 ABC transporter AVS56_RS17230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVS56_RS17235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVS56_RS17240 PF02603 HPr Serine kinase N terminus AVS56_RS17240 PF07475 HPr Serine kinase C-terminal domain AVS56_RS17245 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVS56_RS17245 PF00034 Cytochrome c AVS56_RS17245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS56_RS17255 PF03668 P-loop ATPase protein family AVS56_RS17260 PF03330 Lytic transglycolase AVS56_RS17260 PF05036 Sporulation related domain AVS56_RS17280 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVS56_RS17280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS56_RS17285 PF00941 FAD binding domain in molybdopterin dehydrogenase AVS56_RS17285 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVS56_RS17290 PF09084 NMT1/THI5 like AVS56_RS17295 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17300 PF02441 Flavoprotein AVS56_RS17305 PF00462 Glutaredoxin AVS56_RS17310 PF17827 PrmC N-terminal domain AVS56_RS17310 PF05175 Methyltransferase small domain AVS56_RS17315 PF00472 RF-1 domain AVS56_RS17315 PF03462 PCRF domain AVS56_RS17320 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVS56_RS17320 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVS56_RS17320 PF01488 Shikimate / quinate 5-dehydrogenase AVS56_RS17345 PF00384 Molybdopterin oxidoreductase AVS56_RS17345 PF01568 Molydopterin dinucleotide binding domain AVS56_RS17360 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS56_RS17360 PF13380 CoA binding domain AVS56_RS17360 PF00583 Acetyltransferase (GNAT) family AVS56_RS17365 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17370 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS17370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS17370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS17370 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVS56_RS17375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVS56_RS17375 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS17375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVS56_RS17380 PF02803 Thiolase, C-terminal domain AVS56_RS17380 PF00108 Thiolase, N-terminal domain AVS56_RS17385 PF01037 Lrp/AsnC ligand binding domain AVS56_RS17390 PF01380 SIS domain AVS56_RS17395 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AVS56_RS17400 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17410 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS17415 PF13380 CoA binding domain AVS56_RS17415 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS56_RS17420 PF03466 LysR substrate binding domain AVS56_RS17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS17425 PF08240 Alcohol dehydrogenase GroES-like domain AVS56_RS17425 PF00107 Zinc-binding dehydrogenase AVS56_RS17435 PF01042 Endoribonuclease L-PSP AVS56_RS17445 PF07687 Peptidase dimerisation domain AVS56_RS17445 PF01546 Peptidase family M20/M25/M40 AVS56_RS17450 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17455 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS17455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS17455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS17460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS17460 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS17460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS17465 PF09330 D-lactate dehydrogenase, membrane binding AVS56_RS17465 PF01565 FAD binding domain AVS56_RS17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS17470 PF03466 LysR substrate binding domain AVS56_RS17475 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17500 PF00701 Dihydrodipicolinate synthetase family AVS56_RS17505 PF03466 LysR substrate binding domain AVS56_RS17505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS17510 PF02515 CoA-transferase family III AVS56_RS17515 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17520 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS17520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS17520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS17525 PF01575 MaoC like domain AVS56_RS17540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVS56_RS17540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVS56_RS17545 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS17550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS17550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS17550 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS17555 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17560 PF13607 Succinyl-CoA ligase like flavodoxin domain AVS56_RS17560 PF13380 CoA binding domain AVS56_RS17570 PF00676 Dehydrogenase E1 component AVS56_RS17575 PF02780 Transketolase, C-terminal domain AVS56_RS17575 PF02779 Transketolase, pyrimidine binding domain AVS56_RS17580 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS17585 PF00364 Biotin-requiring enzyme AVS56_RS17585 PF02817 e3 binding domain AVS56_RS17585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVS56_RS17590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS17590 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS17590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS17595 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS17595 PF00501 AMP-binding enzyme AVS56_RS17605 PF13458 Periplasmic binding protein AVS56_RS17610 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS17615 PF00005 ABC transporter AVS56_RS17615 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVS56_RS17620 PF00005 ABC transporter AVS56_RS17625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVS56_RS17625 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS17640 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17655 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17670 PF00899 ThiF family AVS56_RS17675 PF03572 Peptidase family S41 AVS56_RS17675 PF13180 PDZ domain AVS56_RS17680 PF01551 Peptidase family M23 AVS56_RS17685 PF00300 Histidine phosphatase superfamily (branch 1) AVS56_RS17690 PF17773 UPF0176 acylphosphatase like domain AVS56_RS17690 PF12368 Rhodanase C-terminal AVS56_RS17690 PF00581 Rhodanese-like domain AVS56_RS17695 PF00462 Glutaredoxin AVS56_RS17700 PF02556 Preprotein translocase subunit SecB AVS56_RS17705 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVS56_RS17705 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVS56_RS17710 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17715 PF00588 SpoU rRNA Methylase family AVS56_RS17725 PF08241 Methyltransferase domain AVS56_RS17730 PF04107 Glutamate-cysteine ligase family 2(GCS2) AVS56_RS17735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVS56_RS17745 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS17750 PF00005 ABC transporter AVS56_RS17760 PF01799 [2Fe-2S] binding domain AVS56_RS17760 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS17765 PF00941 FAD binding domain in molybdopterin dehydrogenase AVS56_RS17765 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVS56_RS17770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVS56_RS17770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVS56_RS17775 PF03480 Bacterial extracellular solute-binding protein, family 7 AVS56_RS17780 PF00355 Rieske [2Fe-2S] domain AVS56_RS17785 PF14759 Reductase C-terminal AVS56_RS17785 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS17790 PF00355 Rieske [2Fe-2S] domain AVS56_RS17790 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVS56_RS17800 PF00857 Isochorismatase family AVS56_RS17810 PF00561 alpha/beta hydrolase fold AVS56_RS17815 PF17645 Arylmalonate decarboxylase AVS56_RS17825 PF12804 MobA-like NTP transferase domain AVS56_RS17835 PF01047 MarR family AVS56_RS17840 PF02386 Cation transport protein AVS56_RS17845 PF02080 TrkA-C domain AVS56_RS17845 PF02254 TrkA-N domain AVS56_RS17850 PF00072 Response regulator receiver domain AVS56_RS17850 PF02954 Bacterial regulatory protein, Fis family AVS56_RS17850 PF00158 Sigma-54 interaction domain AVS56_RS17855 PF00989 PAS fold AVS56_RS17855 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS17855 PF00672 HAMP domain AVS56_RS17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS17865 PF01189 16S rRNA methyltransferase RsmB/F AVS56_RS17865 PF01029 NusB family AVS56_RS17875 PF03447 Homoserine dehydrogenase, NAD binding domain AVS56_RS17875 PF01958 Domain of unknown function DUF108 AVS56_RS17900 PF01810 LysE type translocator AVS56_RS17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS17905 PF03466 LysR substrate binding domain AVS56_RS17915 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS17920 PF01168 Alanine racemase, N-terminal domain AVS56_RS17925 PF00155 Aminotransferase class I and II AVS56_RS17930 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS17940 PF00682 HMGL-like AVS56_RS17945 PF02481 DNA recombination-mediator protein A AVS56_RS17945 PF17782 DprA winged helix domain AVS56_RS17950 PF01037 Lrp/AsnC ligand binding domain AVS56_RS17955 PF00266 Aminotransferase class-V AVS56_RS17960 PF01327 Polypeptide deformylase AVS56_RS17975 PF00551 Formyl transferase AVS56_RS17975 PF02911 Formyl transferase, C-terminal domain AVS56_RS17985 PF13419 Haloacid dehalogenase-like hydrolase AVS56_RS17995 PF03641 Possible lysine decarboxylase AVS56_RS18005 PF04055 Radical SAM superfamily AVS56_RS18005 PF00919 Uncharacterized protein family UPF0004 AVS56_RS18005 PF18693 TRAM domain AVS56_RS18010 PF01361 Tautomerase enzyme AVS56_RS18015 PF01266 FAD dependent oxidoreductase AVS56_RS18020 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS18025 PF07729 FCD domain AVS56_RS18025 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS18040 PF00202 Aminotransferase class-III AVS56_RS18045 PF00491 Arginase family AVS56_RS18055 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS18060 PF02627 Carboxymuconolactone decarboxylase family AVS56_RS18065 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS18070 PF09339 IclR helix-turn-helix domain AVS56_RS18070 PF01614 Bacterial transcriptional regulator AVS56_RS18075 PF00501 AMP-binding enzyme AVS56_RS18075 PF13193 AMP-binding enzyme C-terminal domain AVS56_RS18080 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS18090 PF12951 Passenger-associated-transport-repeat AVS56_RS18090 PF12951 Passenger-associated-transport-repeat AVS56_RS18110 PF03466 LysR substrate binding domain AVS56_RS18110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS18120 PF14031 Putative serine dehydratase domain AVS56_RS18120 PF01168 Alanine racemase, N-terminal domain AVS56_RS18125 PF07411 Domain of unknown function (DUF1508) AVS56_RS18130 PF01145 SPFH domain / Band 7 family AVS56_RS18140 PF01042 Endoribonuclease L-PSP AVS56_RS18170 PF03837 RecT family AVS56_RS18205 PF00589 Phage integrase family AVS56_RS18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS18210 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS18225 PF03466 LysR substrate binding domain AVS56_RS18230 PF02525 Flavodoxin-like fold AVS56_RS18240 PF02096 60Kd inner membrane protein AVS56_RS18240 PF14849 YidC periplasmic domain AVS56_RS18245 PF01809 Putative membrane protein insertion efficiency factor AVS56_RS18250 PF00825 Ribonuclease P AVS56_RS18255 PF00468 Ribosomal protein L34 AVS56_RS18260 PF08299 Bacterial dnaA protein helix-turn-helix AVS56_RS18260 PF11638 DnaA N-terminal domain AVS56_RS18260 PF00308 Bacterial dnaA protein AVS56_RS18265 PF02768 DNA polymerase III beta subunit, C-terminal domain AVS56_RS18265 PF02767 DNA polymerase III beta subunit, central domain AVS56_RS18265 PF00712 DNA polymerase III beta subunit, N-terminal domain AVS56_RS18270 PF00204 DNA gyrase B AVS56_RS18270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS18270 PF00986 DNA gyrase B subunit, carboxyl terminus AVS56_RS18270 PF01751 Toprim domain AVS56_RS18270 PF18053 DNA gyrase B subunit insert domain AVS56_RS18275 PF01614 Bacterial transcriptional regulator AVS56_RS18275 PF09339 IclR helix-turn-helix domain AVS56_RS18280 PF01425 Amidase AVS56_RS18285 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS18290 PF00708 Acylphosphatase AVS56_RS18295 PF01070 FMN-dependent dehydrogenase AVS56_RS18315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS18315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS18315 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS18320 PF09278 MerR, DNA binding AVS56_RS18320 PF00376 MerR family regulatory protein AVS56_RS18335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVS56_RS18335 PF02770 Acyl-CoA dehydrogenase, middle domain AVS56_RS18335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVS56_RS18350 PF01039 Carboxyl transferase domain AVS56_RS18355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVS56_RS18355 PF02785 Biotin carboxylase C-terminal domain AVS56_RS18355 PF00364 Biotin-requiring enzyme AVS56_RS18355 PF00289 Biotin carboxylase, N-terminal domain AVS56_RS18365 PF00202 Aminotransferase class-III AVS56_RS18370 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS18375 PF01168 Alanine racemase, N-terminal domain AVS56_RS18375 PF14031 Putative serine dehydratase domain AVS56_RS18380 PF16868 NMT1-like family AVS56_RS18390 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS18390 PF00593 TonB dependent receptor AVS56_RS18395 PF04361 Protein of unknown function (DUF494) AVS56_RS18410 PF01751 Toprim domain AVS56_RS18410 PF01131 DNA topoisomerase AVS56_RS18420 PF00005 ABC transporter AVS56_RS18425 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS18435 PF00171 Aldehyde dehydrogenase family AVS56_RS18445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVS56_RS18445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVS56_RS18445 PF00205 Thiamine pyrophosphate enzyme, central domain AVS56_RS18450 PF01037 Lrp/AsnC ligand binding domain AVS56_RS18455 PF01062 Bestrophin, RFP-TM, chloride channel AVS56_RS18465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVS56_RS18480 PF02310 B12 binding domain AVS56_RS18480 PF02607 B12 binding domain AVS56_RS18480 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVS56_RS18480 PF00809 Pterin binding enzyme AVS56_RS18480 PF02574 Homocysteine S-methyltransferase AVS56_RS18485 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS18485 PF00593 TonB dependent receptor AVS56_RS18490 PF01497 Periplasmic binding protein AVS56_RS18495 PF05690 Thiazole biosynthesis protein ThiG AVS56_RS18500 PF08543 Phosphomethylpyrimidine kinase AVS56_RS18515 PF02321 Outer membrane efflux protein AVS56_RS18520 PF01467 Cytidylyltransferase-like AVS56_RS18530 PF01594 AI-2E family transporter AVS56_RS18540 PF02254 TrkA-N domain AVS56_RS18540 PF07885 Ion channel AVS56_RS18550 PF00164 Ribosomal protein S12/S23 AVS56_RS18555 PF00177 Ribosomal protein S7p/S5e AVS56_RS18560 PF00009 Elongation factor Tu GTP binding domain AVS56_RS18560 PF00679 Elongation factor G C-terminus AVS56_RS18560 PF03764 Elongation factor G, domain IV AVS56_RS18560 PF14492 Elongation Factor G, domain II AVS56_RS18560 PF03144 Elongation factor Tu domain 2 AVS56_RS18565 PF03143 Elongation factor Tu C-terminal domain AVS56_RS18565 PF03144 Elongation factor Tu domain 2 AVS56_RS18565 PF00009 Elongation factor Tu GTP binding domain AVS56_RS18570 PF00338 Ribosomal protein S10p/S20e AVS56_RS18575 PF00297 Ribosomal protein L3 AVS56_RS18580 PF00573 Ribosomal protein L4/L1 family AVS56_RS18585 PF00276 Ribosomal protein L23 AVS56_RS18590 PF03947 Ribosomal Proteins L2, C-terminal domain AVS56_RS18590 PF00181 Ribosomal Proteins L2, RNA binding domain AVS56_RS18595 PF00203 Ribosomal protein S19 AVS56_RS18600 PF00237 Ribosomal protein L22p/L17e AVS56_RS18605 PF07650 KH domain AVS56_RS18605 PF00189 Ribosomal protein S3, C-terminal domain AVS56_RS18610 PF00252 Ribosomal protein L16p/L10e AVS56_RS18615 PF00831 Ribosomal L29 protein AVS56_RS18620 PF00366 Ribosomal protein S17 AVS56_RS18630 PF00171 Aldehyde dehydrogenase family AVS56_RS18640 PF00238 Ribosomal protein L14p/L23e AVS56_RS18645 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVS56_RS18650 PF00673 ribosomal L5P family C-terminus AVS56_RS18650 PF00281 Ribosomal protein L5 AVS56_RS18655 PF00253 Ribosomal protein S14p/S29e AVS56_RS18660 PF00410 Ribosomal protein S8 AVS56_RS18665 PF00347 Ribosomal protein L6 AVS56_RS18670 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVS56_RS18675 PF00333 Ribosomal protein S5, N-terminal domain AVS56_RS18675 PF03719 Ribosomal protein S5, C-terminal domain AVS56_RS18680 PF00327 Ribosomal protein L30p/L7e AVS56_RS18685 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVS56_RS18690 PF00344 SecY translocase AVS56_RS18695 PF01176 Translation initiation factor 1A / IF-1 AVS56_RS18700 PF00444 Ribosomal protein L36 AVS56_RS18705 PF00416 Ribosomal protein S13/S18 AVS56_RS18710 PF00411 Ribosomal protein S11 AVS56_RS18715 PF01479 S4 domain AVS56_RS18715 PF00163 Ribosomal protein S4/S9 N-terminal domain AVS56_RS18720 PF01000 RNA polymerase Rpb3/RpoA insert domain AVS56_RS18720 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVS56_RS18720 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVS56_RS18725 PF01196 Ribosomal protein L17 AVS56_RS18730 PF01230 HIT domain AVS56_RS18735 PF03091 CutA1 divalent ion tolerance protein AVS56_RS18740 PF02683 Cytochrome C biogenesis protein transmembrane region AVS56_RS18740 PF11412 Disulphide bond corrector protein DsbC AVS56_RS18745 PF00892 EamA-like transporter family AVS56_RS18750 PF00490 Delta-aminolevulinic acid dehydratase AVS56_RS18755 PF01926 50S ribosome-binding GTPase AVS56_RS18760 PF00034 Cytochrome c AVS56_RS18765 PF05140 ResB-like family AVS56_RS18770 PF01578 Cytochrome C assembly protein AVS56_RS18775 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVS56_RS18775 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVS56_RS18780 PF13627 Prokaryotic lipoprotein-attachment site AVS56_RS18785 PF01491 Frataxin-like domain AVS56_RS18790 PF17092 Penicillin-binding protein OB-like domain AVS56_RS18790 PF00912 Transglycosylase AVS56_RS18790 PF00905 Penicillin binding protein transpeptidase domain AVS56_RS18795 PF01202 Shikimate kinase AVS56_RS18800 PF01761 3-dehydroquinate synthase AVS56_RS18805 PF13286 Phosphohydrolase-associated domain AVS56_RS18805 PF01966 HD domain AVS56_RS18810 PF00043 Glutathione S-transferase, C-terminal domain AVS56_RS18810 PF13417 Glutathione S-transferase, N-terminal domain AVS56_RS18815 PF17755 UvrA DNA-binding domain AVS56_RS18815 PF17760 UvrA interaction domain AVS56_RS18820 PF07690 Major Facilitator Superfamily AVS56_RS18825 PF00436 Single-strand binding protein family AVS56_RS18830 PF07715 TonB-dependent Receptor Plug Domain AVS56_RS18830 PF00593 TonB dependent receptor AVS56_RS18840 PF03328 HpcH/HpaI aldolase/citrate lyase family AVS56_RS18850 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS18860 PF03466 LysR substrate binding domain AVS56_RS18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS18865 PF01979 Amidohydrolase family AVS56_RS18870 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS18875 PF00534 Glycosyl transferases group 1 AVS56_RS18875 PF13439 Glycosyltransferase Family 4 AVS56_RS18885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS18885 PF03466 LysR substrate binding domain AVS56_RS18895 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS18900 PF00005 ABC transporter AVS56_RS18920 PF01274 Malate synthase AVS56_RS18925 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS18925 PF07729 FCD domain AVS56_RS18940 PF01040 UbiA prenyltransferase family AVS56_RS18945 PF00155 Aminotransferase class I and II AVS56_RS18950 PF13185 GAF domain AVS56_RS18955 PF00701 Dihydrodipicolinate synthetase family AVS56_RS18970 PF01476 LysM domain AVS56_RS18970 PF04972 BON domain AVS56_RS18975 PF05690 Thiazole biosynthesis protein ThiG AVS56_RS18975 PF02597 ThiS family AVS56_RS18980 PF00561 alpha/beta hydrolase fold AVS56_RS19000 PF00682 HMGL-like AVS56_RS19005 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS19025 PF07702 UTRA domain AVS56_RS19025 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS19030 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS19040 PF07702 UTRA domain AVS56_RS19040 PF00392 Bacterial regulatory proteins, gntR family AVS56_RS19045 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS19055 PF00005 ABC transporter AVS56_RS19060 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS19065 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS19070 PF00550 Phosphopantetheine attachment site AVS56_RS19070 PF08240 Alcohol dehydrogenase GroES-like domain AVS56_RS19070 PF00698 Acyl transferase domain AVS56_RS19070 PF08659 KR domain AVS56_RS19070 PF08990 Erythronolide synthase docking AVS56_RS19070 PF00109 Beta-ketoacyl synthase, N-terminal domain AVS56_RS19070 PF02801 Beta-ketoacyl synthase, C-terminal domain AVS56_RS19070 PF14765 Polyketide synthase dehydratase AVS56_RS19070 PF16197 Ketoacyl-synthetase C-terminal extension AVS56_RS19075 PF02515 CoA-transferase family III AVS56_RS19080 PF00440 Bacterial regulatory proteins, tetR family AVS56_RS19085 PF09297 NADH pyrophosphatase zinc ribbon domain AVS56_RS19085 PF00293 NUDIX domain AVS56_RS19090 PF00175 Oxidoreductase NAD-binding domain AVS56_RS19090 PF00970 Oxidoreductase FAD-binding domain AVS56_RS19090 PF00111 2Fe-2S iron-sulfur cluster binding domain AVS56_RS19095 PF01425 Amidase AVS56_RS19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVS56_RS19105 PF03466 LysR substrate binding domain AVS56_RS19110 PF13458 Periplasmic binding protein AVS56_RS19120 PF00005 ABC transporter AVS56_RS19130 PF02653 Branched-chain amino acid transport system / permease component AVS56_RS19140 PF00355 Rieske [2Fe-2S] domain AVS56_RS19155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVS56_RS19155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVS56_RS19170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVS56_RS19170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVS56_RS19170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVS56_RS19175 PF07690 Major Facilitator Superfamily AVS56_RS19180 PF14602 Hexapeptide repeat of succinyl-transferase AVS56_RS19180 PF12804 MobA-like NTP transferase domain AVS56_RS19180 PF00132 Bacterial transferase hexapeptide (six repeats) AVS56_RS19200 PF02630 SCO1/SenC AVS56_RS19205 PF01040 UbiA prenyltransferase family AVS56_RS19210 PF02628 Cytochrome oxidase assembly protein AVS56_RS19230 PF00510 Cytochrome c oxidase subunit III AVS56_RS19245 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVS56_RS19250 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVS56_RS19250 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVS56_RS19260 PF00999 Sodium/hydrogen exchanger family AVS56_RS19265 PF00149 Calcineurin-like phosphoesterase AVS56_RS19270 PF04542 Sigma-70 region 2 AVS56_RS19270 PF04545 Sigma-70, region 4 AVS56_RS19270 PF00140 Sigma-70 factor, region 1.2 AVS56_RS19280 PF00756 Putative esterase AVS56_RS19285 PF00107 Zinc-binding dehydrogenase AVS56_RS19285 PF08240 Alcohol dehydrogenase GroES-like domain AVS56_RS19295 PF01645 Conserved region in glutamate synthase AVS56_RS19295 PF01493 GXGXG motif AVS56_RS19295 PF00310 Glutamine amidotransferases class-II AVS56_RS19295 PF04898 Glutamate synthase central domain AVS56_RS19300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVS56_RS19300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVS56_RS19305 PF03922 OmpW family AVS56_RS19310 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS19315 PF00005 ABC transporter AVS56_RS19320 PF02405 Permease MlaE AVS56_RS19325 PF02470 MlaD protein AVS56_RS19330 PF04333 MlaA lipoprotein AVS56_RS19340 PF00005 ABC transporter AVS56_RS19345 PF01061 ABC-2 type transporter AVS56_RS19355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVS56_RS19360 PF01634 ATP phosphoribosyltransferase AVS56_RS19365 PF00815 Histidinol dehydrogenase AVS56_RS19370 PF00155 Aminotransferase class I and II AVS56_RS19375 PF00475 Imidazoleglycerol-phosphate dehydratase AVS56_RS19380 PF00117 Glutamine amidotransferase class-I AVS56_RS19385 PF00977 Histidine biosynthesis protein AVS56_RS19390 PF00977 Histidine biosynthesis protein AVS56_RS19395 PF01502 Phosphoribosyl-AMP cyclohydrolase AVS56_RS19400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVS56_RS19405 PF01230 HIT domain AVS56_RS19410 PF02416 mttA/Hcf106 family AVS56_RS19415 PF02416 mttA/Hcf106 family AVS56_RS19420 PF00902 Sec-independent protein translocase protein (TatC) AVS56_RS19430 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS19435 PF02917 Pertussis toxin, subunit 1 AVS56_RS19440 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS56_RS19440 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS56_RS19445 PF09275 Pertussis toxin S4 subunit AVS56_RS19450 PF09276 Pertussis toxin S5 subunit AVS56_RS19455 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AVS56_RS19455 PF03440 Aerolysin/Pertussis toxin (APT) domain AVS56_RS19460 PF04956 TrbC/VIRB2 family AVS56_RS19465 PF05101 Type IV secretory pathway, VirB3-like protein AVS56_RS19470 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVS56_RS19475 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVS56_RS19485 PF04335 VirB8 protein AVS56_RS19490 PF03524 Conjugal transfer protein AVS56_RS19495 PF03743 Bacterial conjugation TrbI-like protein AVS56_RS19500 PF00437 Type II/IV secretion system protein AVS56_RS19510 PF00892 EamA-like transporter family AVS56_RS19530 PF01926 50S ribosome-binding GTPase AVS56_RS19530 PF12631 MnmE helical domain AVS56_RS19530 PF10396 GTP-binding protein TrmE N-terminus AVS56_RS19535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS19540 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS19545 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS19545 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS56_RS19550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS19550 PF00005 ABC transporter AVS56_RS19560 PF01960 ArgJ family AVS56_RS19570 PF00293 NUDIX domain AVS56_RS19590 PF02321 Outer membrane efflux protein AVS56_RS19595 PF00873 AcrB/AcrD/AcrF family AVS56_RS19600 PF00873 AcrB/AcrD/AcrF family AVS56_RS19605 PF13533 Biotin-lipoyl like AVS56_RS19610 PF07072 Cell division protein AVS56_RS19615 PF01121 Dephospho-CoA kinase AVS56_RS19620 PF01478 Type IV leader peptidase family AVS56_RS19620 PF06750 Bacterial Peptidase A24 N-terminal domain AVS56_RS19635 PF02569 Pantoate-beta-alanine ligase AVS56_RS19640 PF02616 Segregation and condensation protein ScpA AVS56_RS19650 PF07690 Major Facilitator Superfamily AVS56_RS19655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVS56_RS19655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVS56_RS19665 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS19670 PF00005 ABC transporter AVS56_RS19675 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS19680 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS19685 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVS56_RS19690 PF00005 ABC transporter AVS56_RS19695 PF18075 FtsX extracellular domain AVS56_RS19700 PF03975 CheD chemotactic sensory transduction AVS56_RS19710 PF14815 NUDIX domain AVS56_RS19710 PF00730 HhH-GPD superfamily base excision DNA repair protein AVS56_RS19710 PF10576 Iron-sulfur binding domain of endonuclease III AVS56_RS19710 PF00633 Helix-hairpin-helix motif AVS56_RS19720 PF08241 Methyltransferase domain AVS56_RS19730 PF02515 CoA-transferase family III AVS56_RS19735 PF02515 CoA-transferase family III AVS56_RS19745 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS19750 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS19755 PF00881 Nitroreductase family AVS56_RS19765 PF00682 HMGL-like AVS56_RS19770 PF00378 Enoyl-CoA hydratase/isomerase AVS56_RS19775 PF02515 CoA-transferase family III AVS56_RS19780 PF03401 Tripartite tricarboxylate transporter family receptor AVS56_RS19790 PF00199 Catalase AVS56_RS19790 PF06628 Catalase-related immune-responsive AVS56_RS19795 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS19800 PF00005 ABC transporter AVS56_RS19810 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVS56_RS19815 PF01546 Peptidase family M20/M25/M40 AVS56_RS19815 PF07687 Peptidase dimerisation domain AVS56_RS19820 PF00005 ABC transporter AVS56_RS19820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS19825 PF00005 ABC transporter AVS56_RS19825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVS56_RS19830 PF12911 N-terminal TM domain of oligopeptide transport permease C AVS56_RS19830 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS19835 PF00528 Binding-protein-dependent transport system inner membrane component AVS56_RS19840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVS56_RS19845 PF10396 GTP-binding protein TrmE N-terminus AVS56_RS19845 PF12631 MnmE helical domain AVS56_RS19845 PF01926 50S ribosome-binding GTPase AVS56_RS19855 PF00072 Response regulator receiver domain AVS56_RS19855 PF00486 Transcriptional regulatory protein, C terminal AVS56_RS19860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVS56_RS19860 PF00512 His Kinase A (phospho-acceptor) domain AVS56_RS19875 PF01970 Tripartite tricarboxylate transporter TctA family AVS56_RS19880 PF00155 Aminotransferase class I and II AVS56_RS19885 PF00313 'Cold-shock' DNA-binding domain