AC880_RS00005	SM01228	AC880_RS00005
AC880_RS00025	SM00470	ParB-like nuclease domain
AC880_RS00030	SM00870	AC880_RS00030
AC880_RS00070	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AC880_RS00070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AC880_RS00075	SM00649	Ribosomal protein L11/L12
AC880_RS00100	SM00663	RNA polymerase I subunit A N-terminus
AC880_RS00130	SM00448	cheY-homologous receiver domain
AC880_RS00130	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS00200	SM00563	Phosphate acyltransferases
AC880_RS00240	SM00421	helix_turn_helix, Lux Regulon
AC880_RS00290	SM00382	ATPases associated with a variety of cellular activities
AC880_RS00305	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS00400	SM00387	Histidine kinase-like ATPases
AC880_RS00410	SM00644	AC880_RS00410
AC880_RS00425	SM00382	ATPases associated with a variety of cellular activities
AC880_RS00425	SM00962	SRP54-type protein, GTPase domain
AC880_RS00425	SM00963	SRP54-type protein, helical bundle domain
AC880_RS00525	SM00382	ATPases associated with a variety of cellular activities
AC880_RS00545	SM00936	Penicillin-binding protein 5, C-terminal domain 
AC880_RS00565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC880_RS00610	SM00836	DALR anticodon binding domain
AC880_RS00610	SM01016	Arginyl tRNA synthetase N terminal dom
AC880_RS00645	SM00382	ATPases associated with a variety of cellular activities
AC880_RS00660	SM00382	ATPases associated with a variety of cellular activities
AC880_RS00695	SM00917	LeuA allosteric (dimerisation) domain
AC880_RS00750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS00750	SM00895	AC880_RS00750
AC880_RS00780	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS00790	SM00797	Allophanate hydrolase subunit 2
AC880_RS00795	SM00796	Allophanate hydrolase subunit 1
AC880_RS00820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS00820	SM00387	Histidine kinase-like ATPases
AC880_RS00820	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS00825	SM00448	cheY-homologous receiver domain
AC880_RS00825	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS00830	SM00091	PAS domain
AC880_RS00830	SM00387	Histidine kinase-like ATPases
AC880_RS00830	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS00835	SM00448	cheY-homologous receiver domain
AC880_RS00835	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS00845	SM00978	AC880_RS00845
AC880_RS00870	SM00382	ATPases associated with a variety of cellular activities
AC880_RS00885	SM00487	DEAD-like helicases superfamily
AC880_RS00885	SM00490	helicase superfamily c-terminal domain
AC880_RS00930	SM00450	Rhodanese Homology Domain
AC880_RS01025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS01025	SM00895	AC880_RS01025
AC880_RS01075	SM00882	Coenzyme A transferase
AC880_RS01080	SM00882	Coenzyme A transferase
AC880_RS01085	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS01105	SM00869	Autotransporter beta-domain
AC880_RS01135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS01135	SM00895	AC880_RS01135
AC880_RS01205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS01205	SM00895	AC880_RS01205
AC880_RS01245	SM00382	ATPases associated with a variety of cellular activities
AC880_RS01260	SM00853	MutL C terminal dimerisation domain
AC880_RS01260	SM01340	AC880_RS01260
AC880_RS01270	SM00646	AC880_RS01270
AC880_RS01350	SM00382	ATPases associated with a variety of cellular activities
AC880_RS01355	SM00382	ATPases associated with a variety of cellular activities
AC880_RS01440	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC880_RS01470	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS01480	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS01530	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC880_RS01555	SM00382	ATPases associated with a variety of cellular activities
AC880_RS01560	SM00382	ATPases associated with a variety of cellular activities
AC880_RS01630	SM00732	Likely ribonuclease with RNase H fold.
AC880_RS01645	SM00563	Phosphate acyltransferases
AC880_RS01695	SM00849	Metallo-beta-lactamase superfamily
AC880_RS01725	SM00267	diguanylate cyclase
AC880_RS01750	SM00382	ATPases associated with a variety of cellular activities
AC880_RS01770	SM00965	Secretin and TonB N terminus short domain
AC880_RS01815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS01815	SM00895	AC880_RS01815
AC880_RS01830	SM01236	AC880_RS01830
AC880_RS01850	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS01875	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC880_RS01890	SM00845	GatB domain
AC880_RS01965	SM00749	bacterial OsmY and nodulation domain
AC880_RS02030	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS02070	SM00450	Rhodanese Homology Domain
AC880_RS02175	SM00479	AC880_RS02175
AC880_RS02205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS02210	SM00838	Elongation factor G C-terminus
AC880_RS02210	SM00889	Elongation factor G, domain IV
AC880_RS02280	SM00357	Cold shock protein domain
AC880_RS02290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS02290	SM00895	AC880_RS02290
AC880_RS02305	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC880_RS02370	SM00363	S4 RNA-binding domain
AC880_RS02375	SM00316	Ribosomal protein S1-like RNA-binding domain
AC880_RS02415	SM00954	Region found in RelA / SpoT proteins
AC880_RS02460	SM00478	endonuclease III
AC880_RS02460	SM00525	AC880_RS02460
AC880_RS02465	SM00382	ATPases associated with a variety of cellular activities
AC880_RS02470	SM00382	ATPases associated with a variety of cellular activities
AC880_RS02500	SM00382	ATPases associated with a variety of cellular activities
AC880_RS02525	SM00382	ATPases associated with a variety of cellular activities
AC880_RS02550	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC880_RS02550	SM00292	breast cancer carboxy-terminal domain
AC880_RS02550	SM00532	Ligase N family
AC880_RS02555	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AC880_RS02560	SM00968	SMC proteins Flexible Hinge Domain
AC880_RS02570	SM00986	Uracil DNA glycosylase superfamily
AC880_RS02570	SM00987	UreE urease accessory protein, C-terminal domain 
AC880_RS02580	SM00448	cheY-homologous receiver domain
AC880_RS02580	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS02595	SM00387	Histidine kinase-like ATPases
AC880_RS02595	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS02610	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS02625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS02625	SM00895	AC880_RS02625
AC880_RS02630	SM01130	AC880_RS02630
AC880_RS02685	SM00387	Histidine kinase-like ATPases
AC880_RS02685	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS02690	SM00448	cheY-homologous receiver domain
AC880_RS02690	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS02715	SM00411	bacterial (prokaryotic) histone like domain
AC880_RS02720	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AC880_RS02730	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AC880_RS02735	SM00316	Ribosomal protein S1-like RNA-binding domain
AC880_RS02735	SM00357	Cold shock protein domain
AC880_RS02735	SM00955	AC880_RS02735
AC880_RS02745	SM01144	AC880_RS02745
AC880_RS02780	SM00155	Phospholipase D. Active site motifs.
AC880_RS02825	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC880_RS02830	SM00267	diguanylate cyclase
AC880_RS02885	SM00883	Chaperonin 10 Kd subunit
AC880_RS02895	SM00869	Autotransporter beta-domain
AC880_RS02915	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AC880_RS02955	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS02995	SM00880	AC880_RS02995
AC880_RS03000	SM00382	ATPases associated with a variety of cellular activities
AC880_RS03000	SM00962	SRP54-type protein, GTPase domain
AC880_RS03000	SM00963	SRP54-type protein, helical bundle domain
AC880_RS03035	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC880_RS03065	SM00382	ATPases associated with a variety of cellular activities
AC880_RS03085	SM00919	Malic enzyme, NAD binding domain
AC880_RS03085	SM01274	AC880_RS03085
AC880_RS03105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS03105	SM00895	AC880_RS03105
AC880_RS03185	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS03190	SM00852	Probable molybdopterin binding domain
AC880_RS03210	SM00487	DEAD-like helicases superfamily
AC880_RS03210	SM00490	helicase superfamily c-terminal domain
AC880_RS03285	SM01011	Aminopeptidase P, N-terminal domain
AC880_RS03310	SM00798	AICARFT/IMPCHase bienzyme
AC880_RS03310	SM00851	MGS-like domain
AC880_RS03320	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC880_RS03335	SM00382	ATPases associated with a variety of cellular activities
AC880_RS03340	SM00341	Helicase and RNase D C-terminal
AC880_RS03340	SM00487	DEAD-like helicases superfamily
AC880_RS03340	SM00490	helicase superfamily c-terminal domain
AC880_RS03340	SM00956	AC880_RS03340
AC880_RS03355	SM00947	Carbonic anhydrase
AC880_RS03380	SM00382	ATPases associated with a variety of cellular activities
AC880_RS03385	SM00382	ATPases associated with a variety of cellular activities
AC880_RS03625	SM00448	cheY-homologous receiver domain
AC880_RS03625	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS03680	SM00382	ATPases associated with a variety of cellular activities
AC880_RS03730	SM00650	Ribosomal RNA adenine dimethylases
AC880_RS03795	SM00382	ATPases associated with a variety of cellular activities
AC880_RS03815	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS03845	SM00867	YceI-like domain 
AC880_RS03850	SM00965	Secretin and TonB N terminus short domain
AC880_RS03875	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS03885	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS03890	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS03895	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AC880_RS03975	SM00382	ATPases associated with a variety of cellular activities
AC880_RS03995	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS04010	SM00382	ATPases associated with a variety of cellular activities
AC880_RS04040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS04040	SM00895	AC880_RS04040
AC880_RS04045	SM00869	Autotransporter beta-domain
AC880_RS04050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS04050	SM00895	AC880_RS04050
AC880_RS04055	SM00829	Enoylreductase
AC880_RS04075	SM00382	ATPases associated with a variety of cellular activities
AC880_RS04135	SM00487	DEAD-like helicases superfamily
AC880_RS04135	SM00490	helicase superfamily c-terminal domain
AC880_RS04135	SM00982	AC880_RS04135
AC880_RS04135	SM01058	CarD-like/TRCF domain
AC880_RS04220	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AC880_RS04225	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AC880_RS04285	SM00014	Acid phosphatase homologues
AC880_RS04345	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS04370	SM00450	Rhodanese Homology Domain
AC880_RS04430	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS04455	SM00829	Enoylreductase
AC880_RS04485	SM00316	Ribosomal protein S1-like RNA-binding domain
AC880_RS04485	SM00322	K homology RNA-binding domain
AC880_RS04490	SM01387	AC880_RS04490
AC880_RS04535	SM00382	ATPases associated with a variety of cellular activities
AC880_RS04670	SM00382	ATPases associated with a variety of cellular activities
AC880_RS04780	SM00434	DNA Topoisomerase IV
AC880_RS04790	SM00830	Chorismate mutase type II
AC880_RS04810	SM00316	Ribosomal protein S1-like RNA-binding domain
AC880_RS04815	SM00411	bacterial (prokaryotic) histone like domain
AC880_RS04865	SM00893	Electron transfer flavoprotein domain
AC880_RS04870	SM00893	Electron transfer flavoprotein domain
AC880_RS04905	SM00382	ATPases associated with a variety of cellular activities
AC880_RS04920	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC880_RS04970	SM00363	S4 RNA-binding domain
AC880_RS05015	SM00421	helix_turn_helix, Lux Regulon
AC880_RS05015	SM00448	cheY-homologous receiver domain
AC880_RS05020	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC880_RS05020	SM00091	PAS domain
AC880_RS05020	SM00387	Histidine kinase-like ATPases
AC880_RS05020	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS05055	SM00861	Transketolase, pyrimidine binding domain
AC880_RS05060	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC880_RS05115	SM00271	DnaJ molecular chaperone homology domain
AC880_RS05135	SM00852	Probable molybdopterin binding domain
AC880_RS05155	SM00316	Ribosomal protein S1-like RNA-binding domain
AC880_RS05195	SM00448	cheY-homologous receiver domain
AC880_RS05200	SM00073	Histidine Phosphotransfer domain
AC880_RS05200	SM00260	Two component signalling adaptor domain
AC880_RS05200	SM00387	Histidine kinase-like ATPases
AC880_RS05200	SM01231	AC880_RS05200
AC880_RS05205	SM00260	Two component signalling adaptor domain
AC880_RS05210	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC880_RS05210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS05220	SM00448	cheY-homologous receiver domain
AC880_RS05225	SM00448	cheY-homologous receiver domain
AC880_RS05265	SM01091	Transporter associated domain
AC880_RS05280	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC880_RS05305	SM01323	AC880_RS05305
AC880_RS05340	SM00869	Autotransporter beta-domain
AC880_RS05390	SM00919	Malic enzyme, NAD binding domain
AC880_RS05390	SM01274	AC880_RS05390
AC880_RS05415	SM00382	ATPases associated with a variety of cellular activities
AC880_RS05460	SM00382	ATPases associated with a variety of cellular activities
AC880_RS05470	SM01103	AC880_RS05470
AC880_RS05510	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC880_RS05530	SM00448	cheY-homologous receiver domain
AC880_RS05530	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS05535	SM00052	Putative diguanylate phosphodiesterase
AC880_RS05535	SM00267	diguanylate cyclase
AC880_RS05535	SM00387	Histidine kinase-like ATPases
AC880_RS05535	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS05545	SM00382	ATPases associated with a variety of cellular activities
AC880_RS05565	SM00382	ATPases associated with a variety of cellular activities
AC880_RS05590	SM00822	AC880_RS05590
AC880_RS05615	SM00382	ATPases associated with a variety of cellular activities
AC880_RS05625	SM00869	Autotransporter beta-domain
AC880_RS05650	SM00849	Metallo-beta-lactamase superfamily
AC880_RS05660	SM00481	DNA polymerase alpha chain like domain
AC880_RS05685	SM00919	Malic enzyme, NAD binding domain
AC880_RS05685	SM01274	AC880_RS05685
AC880_RS05695	SM00344	helix_turn_helix ASNC type
AC880_RS05705	SM00861	Transketolase, pyrimidine binding domain
AC880_RS05770	SM00316	Ribosomal protein S1-like RNA-binding domain
AC880_RS05770	SM00732	Likely ribonuclease with RNase H fold.
AC880_RS05775	SM00491	AC880_RS05775
AC880_RS05785	SM00363	S4 RNA-binding domain
AC880_RS05800	SM00822	AC880_RS05800
AC880_RS05855	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC880_RS05865	SM00822	AC880_RS05865
AC880_RS05890	SM01007	Class II Aldolase and Adducin N-terminal domain
AC880_RS05955	SM00382	ATPases associated with a variety of cellular activities
AC880_RS05970	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS06040	SM00100	Cyclic nucleotide-monophosphate binding domain
AC880_RS06040	SM00419	helix_turn_helix, cAMP Regulatory protein
AC880_RS06045	SM00382	ATPases associated with a variety of cellular activities
AC880_RS06045	SM01086	C-terminal, D2-small domain, of ClpB protein
AC880_RS06060	SM00869	Autotransporter beta-domain
AC880_RS06065	SM00869	Autotransporter beta-domain
AC880_RS06130	SM00382	ATPases associated with a variety of cellular activities
AC880_RS06165	SM01005	Alanine racemase, C-terminal domain
AC880_RS06190	SM00327	von Willebrand factor (vWF) type A domain
AC880_RS06195	SM00382	ATPases associated with a variety of cellular activities
AC880_RS06270	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AC880_RS06295	SM00363	S4 RNA-binding domain
AC880_RS06305	SM00316	Ribosomal protein S1-like RNA-binding domain
AC880_RS06345	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AC880_RS06345	SM00474	3'-5' exonuclease
AC880_RS06345	SM00475	5'-3' exonuclease
AC880_RS06345	SM00482	DNA polymerase A domain
AC880_RS06385	SM00357	Cold shock protein domain
AC880_RS06385	SM00382	ATPases associated with a variety of cellular activities
AC880_RS06385	SM00959	Rho termination factor, N-terminal domain
AC880_RS06395	SM00387	Histidine kinase-like ATPases
AC880_RS06395	SM00433	TopoisomeraseII
AC880_RS06405	SM00434	DNA Topoisomerase IV
AC880_RS06490	SM00382	ATPases associated with a variety of cellular activities
AC880_RS06525	SM00953	AC880_RS06525
AC880_RS06655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS06675	SM00642	Alpha-amylase domain
AC880_RS06685	SM00642	Alpha-amylase domain
AC880_RS06690	SM00642	Alpha-amylase domain
AC880_RS06695	SM00642	Alpha-amylase domain
AC880_RS06700	SM00642	Alpha-amylase domain
AC880_RS06705	SM00642	Alpha-amylase domain
AC880_RS06750	SM00155	Phospholipase D. Active site motifs.
AC880_RS06775	SM00869	Autotransporter beta-domain
AC880_RS06800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS06800	SM00895	AC880_RS06800
AC880_RS06805	SM00881	CoA binding domain
AC880_RS06830	SM00354	helix_turn _helix lactose operon repressor
AC880_RS06850	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC880_RS06865	SM00382	ATPases associated with a variety of cellular activities
AC880_RS06875	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS06900	SM00382	ATPases associated with a variety of cellular activities
AC880_RS06900	SM00962	SRP54-type protein, GTPase domain
AC880_RS06915	SM00858	AC880_RS06915
AC880_RS06960	SM00047	Lysozyme subfamily 2
AC880_RS06975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC880_RS06975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS06980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC880_RS06980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS06985	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC880_RS06985	SM00091	PAS domain
AC880_RS06985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC880_RS06985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS07050	SM00382	ATPases associated with a variety of cellular activities
AC880_RS07145	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC880_RS07190	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC880_RS07200	SM00935	Outer membrane protein (OmpH-like)
AC880_RS07260	SM00244	prohibitin homologues
AC880_RS07265	SM00267	diguanylate cyclase
AC880_RS07330	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AC880_RS07335	SM00851	MGS-like domain
AC880_RS07335	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AC880_RS07345	SM00855	Phosphoglycerate mutase family
AC880_RS07355	SM00382	ATPases associated with a variety of cellular activities
AC880_RS07375	SM00052	Putative diguanylate phosphodiesterase
AC880_RS07395	SM00852	Probable molybdopterin binding domain
AC880_RS07435	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC880_RS07470	SM00382	ATPases associated with a variety of cellular activities
AC880_RS07490	SM01329	AC880_RS07490
AC880_RS07495	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC880_RS07555	SM00644	AC880_RS07555
AC880_RS07590	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AC880_RS07595	SM00822	AC880_RS07595
AC880_RS07605	SM00825	Beta-ketoacyl synthase
AC880_RS07630	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC880_RS07635	SM00838	Elongation factor G C-terminus
AC880_RS07645	SM00358	Double-stranded RNA binding motif
AC880_RS07645	SM00535	Ribonuclease III family
AC880_RS07805	SM00882	Coenzyme A transferase
AC880_RS07820	SM00382	ATPases associated with a variety of cellular activities
AC880_RS07875	SM01192	AC880_RS07875
AC880_RS07875	SM01193	AC880_RS07875
AC880_RS07885	SM00028	Tetratricopeptide repeats
AC880_RS07885	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS07940	SM00981	AC880_RS07940
AC880_RS07980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS07980	SM00866	AC880_RS07980
AC880_RS08065	SM00382	ATPases associated with a variety of cellular activities
AC880_RS08130	SM00382	ATPases associated with a variety of cellular activities
AC880_RS08130	SM00487	DEAD-like helicases superfamily
AC880_RS08130	SM00490	helicase superfamily c-terminal domain
AC880_RS08130	SM00847	Helicase associated domain (HA2)  Add an annotation
AC880_RS08140	SM00481	DNA polymerase alpha chain like domain
AC880_RS08195	SM00382	ATPases associated with a variety of cellular activities
AC880_RS08215	SM00316	Ribosomal protein S1-like RNA-binding domain
AC880_RS08255	SM00869	Autotransporter beta-domain
AC880_RS08285	SM01209	AC880_RS08285
AC880_RS08285	SM01210	AC880_RS08285
AC880_RS08350	SM00382	ATPases associated with a variety of cellular activities
AC880_RS08370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS08375	SM01329	AC880_RS08375
AC880_RS08395	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC880_RS08410	SM00829	Enoylreductase
AC880_RS08425	SM00450	Rhodanese Homology Domain
AC880_RS08440	SM00382	ATPases associated with a variety of cellular activities
AC880_RS08485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC880_RS08485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS08600	SM00382	ATPases associated with a variety of cellular activities
AC880_RS08675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS08675	SM00331	Sigma factor PP2C-like phosphatases
AC880_RS08675	SM01049	AC880_RS08675
AC880_RS08685	SM01005	Alanine racemase, C-terminal domain
AC880_RS08700	SM00155	Phospholipase D. Active site motifs.
AC880_RS08710	SM00869	Autotransporter beta-domain
AC880_RS08750	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC880_RS08795	SM01207	AC880_RS08795
AC880_RS08810	SM00257	Lysin motif
AC880_RS08835	SM00422	helix_turn_helix, mercury resistance
AC880_RS08885	SM00749	bacterial OsmY and nodulation domain
AC880_RS08950	SM00344	helix_turn_helix ASNC type
AC880_RS08975	SM00904	Riboflavin kinase
AC880_RS09005	SM00965	Secretin and TonB N terminus short domain
AC880_RS09010	SM00382	ATPases associated with a variety of cellular activities
AC880_RS09045	SM00869	Autotransporter beta-domain
AC880_RS09060	SM00357	Cold shock protein domain
AC880_RS09090	SM00382	ATPases associated with a variety of cellular activities
AC880_RS09090	SM00994	ClpX C4-type zinc finger
AC880_RS09090	SM01086	C-terminal, D2-small domain, of ClpB protein
AC880_RS09095	SM00382	ATPases associated with a variety of cellular activities
AC880_RS09095	SM00464	Found in ATP-dependent protease La (LON)
AC880_RS09150	SM00882	Coenzyme A transferase
AC880_RS09155	SM00882	Coenzyme A transferase
AC880_RS09185	SM00869	Autotransporter beta-domain
AC880_RS09200	SM00487	DEAD-like helicases superfamily
AC880_RS09200	SM00490	helicase superfamily c-terminal domain
AC880_RS09205	SM00226	Low molecular weight phosphatase family
AC880_RS09230	SM00271	DnaJ molecular chaperone homology domain
AC880_RS09285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS09285	SM00866	AC880_RS09285
AC880_RS09345	SM00382	ATPases associated with a variety of cellular activities
AC880_RS09395	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC880_RS09445	SM00387	Histidine kinase-like ATPases
AC880_RS09445	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS09450	SM00448	cheY-homologous receiver domain
AC880_RS09465	SM00562	AC880_RS09465
AC880_RS09495	SM00564	beta-propeller repeat
AC880_RS09500	SM00382	ATPases associated with a variety of cellular activities
AC880_RS09520	SM00244	prohibitin homologues
AC880_RS09525	SM00244	prohibitin homologues
AC880_RS09535	SM00788	Adenylosuccinate synthetase
AC880_RS09550	SM00400	zinc finger
AC880_RS09550	SM00493	AC880_RS09550
AC880_RS09550	SM00766	DNA primase DnaG DnaB-binding
AC880_RS09600	SM00382	ATPases associated with a variety of cellular activities
AC880_RS09705	SM00382	ATPases associated with a variety of cellular activities
AC880_RS09745	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS09765	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC880_RS09780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS09780	SM00895	AC880_RS09780
AC880_RS09800	SM00382	ATPases associated with a variety of cellular activities
AC880_RS09835	SM00464	Found in ATP-dependent protease La (LON)
AC880_RS09845	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS09855	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC880_RS09950	SM00822	AC880_RS09950
AC880_RS10120	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC880_RS10120	SM00465	GIY-YIG type nucleases (URI domain)
AC880_RS10155	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS10175	SM00382	ATPases associated with a variety of cellular activities
AC880_RS10215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS10215	SM00895	AC880_RS10215
AC880_RS10235	SM00382	ATPases associated with a variety of cellular activities
AC880_RS10290	SM00411	bacterial (prokaryotic) histone like domain
AC880_RS10295	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC880_RS10440	SM00479	AC880_RS10440
AC880_RS10500	SM00841	Elongation factor P, C-terminal
AC880_RS10500	SM01185	AC880_RS10500
AC880_RS10530	SM00382	ATPases associated with a variety of cellular activities
AC880_RS10545	SM00028	Tetratricopeptide repeats
AC880_RS10575	SM00858	AC880_RS10575
AC880_RS10620	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC880_RS10625	SM00382	ATPases associated with a variety of cellular activities
AC880_RS10645	SM00318	Staphylococcal nuclease homologues
AC880_RS10665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS10710	SM00421	helix_turn_helix, Lux Regulon
AC880_RS10715	SM00421	helix_turn_helix, Lux Regulon
AC880_RS10720	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC880_RS10735	SM00028	Tetratricopeptide repeats
AC880_RS10760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC880_RS10790	SM00881	CoA binding domain
AC880_RS10795	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS10810	SM00382	ATPases associated with a variety of cellular activities
AC880_RS10925	SM00478	endonuclease III
AC880_RS10930	SM00840	AC880_RS10930
AC880_RS10935	SM00028	Tetratricopeptide repeats
AC880_RS10955	SM01091	Transporter associated domain
AC880_RS10975	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS11070	SM00912	haemagglutination activity domain
AC880_RS11075	SM00421	helix_turn_helix, Lux Regulon
AC880_RS11075	SM00448	cheY-homologous receiver domain
AC880_RS11080	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS11080	SM00073	Histidine Phosphotransfer domain
AC880_RS11080	SM00091	PAS domain
AC880_RS11080	SM00387	Histidine kinase-like ATPases
AC880_RS11080	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS11080	SM00448	cheY-homologous receiver domain
AC880_RS11085	SM00052	Putative diguanylate phosphodiesterase
AC880_RS11130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS11130	SM00895	AC880_RS11130
AC880_RS11170	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC880_RS11180	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11190	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS11190	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC880_RS11195	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS11200	SM00248	ankyrin repeats
AC880_RS11285	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11290	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11390	SM00822	AC880_RS11390
AC880_RS11405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC880_RS11510	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS11515	SM00869	Autotransporter beta-domain
AC880_RS11520	SM00421	helix_turn_helix, Lux Regulon
AC880_RS11520	SM00448	cheY-homologous receiver domain
AC880_RS11560	SM00028	Tetratricopeptide repeats
AC880_RS11560	SM00327	von Willebrand factor (vWF) type A domain
AC880_RS11565	SM00327	von Willebrand factor (vWF) type A domain
AC880_RS11615	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11620	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11670	SM00984	UDP binding domain
AC880_RS11695	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11740	SM00487	DEAD-like helicases superfamily
AC880_RS11740	SM00490	helicase superfamily c-terminal domain
AC880_RS11785	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11810	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11810	SM00448	cheY-homologous receiver domain
AC880_RS11815	SM00091	PAS domain
AC880_RS11815	SM00387	Histidine kinase-like ATPases
AC880_RS11815	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS11820	SM01230	AC880_RS11820
AC880_RS11825	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC880_RS11845	SM00052	Putative diguanylate phosphodiesterase
AC880_RS11845	SM00267	diguanylate cyclase
AC880_RS11850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC880_RS11850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS11885	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS11900	SM00822	AC880_RS11900
AC880_RS11915	SM00072	Guanylate kinase homologues.
AC880_RS11920	SM01409	AC880_RS11920
AC880_RS11925	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC880_RS11925	SM00954	Region found in RelA / SpoT proteins
AC880_RS11930	SM00382	ATPases associated with a variety of cellular activities
AC880_RS11940	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS11940	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC880_RS11960	SM01130	AC880_RS11960
AC880_RS11975	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AC880_RS11980	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AC880_RS11980	SM00534	ATPase domain of DNA mismatch repair MUTS family
AC880_RS12055	SM00493	AC880_RS12055
AC880_RS12065	SM00382	ATPases associated with a variety of cellular activities
AC880_RS12155	SM00382	ATPases associated with a variety of cellular activities
AC880_RS12165	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS12165	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC880_RS12175	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS12180	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS12195	SM01001	AIR carboxylase
AC880_RS12210	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS12240	SM00421	helix_turn_helix, Lux Regulon
AC880_RS12255	SM00834	Putative regulatory protein
AC880_RS12275	SM00382	ATPases associated with a variety of cellular activities
AC880_RS12290	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS12340	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC880_RS12345	SM00421	helix_turn_helix, Lux Regulon
AC880_RS12345	SM00448	cheY-homologous receiver domain
AC880_RS12365	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC880_RS12365	SM00267	diguanylate cyclase
AC880_RS12415	SM01006	Siderophore biosynthesis protein domain
AC880_RS12435	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS12460	SM00267	diguanylate cyclase
AC880_RS12490	SM00382	ATPases associated with a variety of cellular activities
AC880_RS12500	SM00843	AC880_RS12500
AC880_RS12510	SM00463	Small MutS-related domain
AC880_RS12560	SM00448	cheY-homologous receiver domain
AC880_RS12560	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS12580	SM01329	AC880_RS12580
AC880_RS12605	SM00382	ATPases associated with a variety of cellular activities
AC880_RS12630	SM00271	DnaJ molecular chaperone homology domain
AC880_RS12780	SM00240	Forkhead associated domain
AC880_RS12780	SM00382	ATPases associated with a variety of cellular activities
AC880_RS12790	SM00858	AC880_RS12790
AC880_RS12860	SM00881	CoA binding domain
AC880_RS12890	SM00382	ATPases associated with a variety of cellular activities
AC880_RS12895	SM00448	cheY-homologous receiver domain
AC880_RS12895	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS12900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS12900	SM00387	Histidine kinase-like ATPases
AC880_RS12900	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS12915	SM00382	ATPases associated with a variety of cellular activities
AC880_RS12930	SM00822	AC880_RS12930
AC880_RS13040	SM00422	helix_turn_helix, mercury resistance
AC880_RS13045	SM00411	bacterial (prokaryotic) histone like domain
AC880_RS13050	SM00873	B3/4 domain
AC880_RS13050	SM00874	tRNA synthetase B5 domain
AC880_RS13050	SM00896	Ferredoxin-fold anticodon binding domain
AC880_RS13155	SM00354	helix_turn _helix lactose operon repressor
AC880_RS13160	SM00382	ATPases associated with a variety of cellular activities
AC880_RS13200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS13210	SM00829	Enoylreductase
AC880_RS13230	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS13255	SM00849	Metallo-beta-lactamase superfamily
AC880_RS13255	SM01027	Beta-Casp domain
AC880_RS13300	SM00382	ATPases associated with a variety of cellular activities
AC880_RS13315	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS13340	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS13355	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC880_RS13355	SM01240	AC880_RS13355
AC880_RS13365	SM00869	Autotransporter beta-domain
AC880_RS13405	SM00344	helix_turn_helix ASNC type
AC880_RS13440	SM00382	ATPases associated with a variety of cellular activities
AC880_RS13445	SM00382	ATPases associated with a variety of cellular activities
AC880_RS13450	SM00420	helix_turn_helix, Deoxyribose operon repressor
AC880_RS13450	SM01134	AC880_RS13450
AC880_RS13460	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS13505	SM01130	AC880_RS13505
AC880_RS13510	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS13545	SM01007	Class II Aldolase and Adducin N-terminal domain
AC880_RS13550	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS13555	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC880_RS13570	SM00912	haemagglutination activity domain
AC880_RS13575	SM01211	AC880_RS13575
AC880_RS13675	SM00479	AC880_RS13675
AC880_RS13735	SM00938	Nitrogen regulatory protein P-II
AC880_RS13770	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC880_RS13775	SM00852	Probable molybdopterin binding domain
AC880_RS13780	SM00852	Probable molybdopterin binding domain
AC880_RS13830	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC880_RS13830	SM00876	Biotin and Thiamin Synthesis associated domain
AC880_RS13855	SM00422	helix_turn_helix, mercury resistance
AC880_RS13925	SM00938	Nitrogen regulatory protein P-II
AC880_RS13935	SM00869	Autotransporter beta-domain
AC880_RS13955	SM00382	ATPases associated with a variety of cellular activities
AC880_RS13960	SM00382	ATPases associated with a variety of cellular activities
AC880_RS14005	SM00382	ATPases associated with a variety of cellular activities
AC880_RS14005	SM01086	C-terminal, D2-small domain, of ClpB protein
AC880_RS14015	SM01359	AC880_RS14015
AC880_RS14015	SM01360	AC880_RS14015
AC880_RS14025	SM00357	Cold shock protein domain
AC880_RS14090	SM00822	AC880_RS14090
AC880_RS14175	SM00670	Large family of predicted nucleotide-binding domains
AC880_RS14190	SM00382	ATPases associated with a variety of cellular activities
AC880_RS14225	SM00861	Transketolase, pyrimidine binding domain
AC880_RS14240	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS14265	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC880_RS14265	SM00924	MgtE intracellular N domain
AC880_RS14320	SM00382	ATPases associated with a variety of cellular activities
AC880_RS14320	SM00930	AC880_RS14320
AC880_RS14375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS14375	SM00895	AC880_RS14375
AC880_RS14410	SM00382	ATPases associated with a variety of cellular activities
AC880_RS14440	SM00422	helix_turn_helix, mercury resistance
AC880_RS14465	SM00822	AC880_RS14465
AC880_RS14550	SM00822	AC880_RS14550
AC880_RS14575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC880_RS14600	SM00829	Enoylreductase
AC880_RS14615	SM00382	ATPases associated with a variety of cellular activities
AC880_RS14640	SM00344	helix_turn_helix ASNC type
AC880_RS14685	SM00248	ankyrin repeats
AC880_RS14710	SM00382	ATPases associated with a variety of cellular activities
AC880_RS14745	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS14760	SM00382	ATPases associated with a variety of cellular activities
AC880_RS14800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS14800	SM00895	AC880_RS14800
AC880_RS14870	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AC880_RS14870	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AC880_RS14890	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS14925	SM00912	haemagglutination activity domain
AC880_RS14945	SM00528	Domain in histone-like proteins of HNS family
AC880_RS14985	SM00257	Lysin motif
AC880_RS15035	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC880_RS15060	SM00448	cheY-homologous receiver domain
AC880_RS15065	SM00387	Histidine kinase-like ATPases
AC880_RS15160	SM00363	S4 RNA-binding domain
AC880_RS15190	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC880_RS15230	SM00382	ATPases associated with a variety of cellular activities
AC880_RS15250	SM00487	DEAD-like helicases superfamily
AC880_RS15250	SM00490	helicase superfamily c-terminal domain
AC880_RS15260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS15260	SM00895	AC880_RS15260
AC880_RS15295	SM00344	helix_turn_helix ASNC type
AC880_RS15375	SM00878	Biotin carboxylase C-terminal domain
AC880_RS15405	SM00955	AC880_RS15405
AC880_RS15435	SM00344	helix_turn_helix ASNC type
AC880_RS15465	SM00957	SecA DEAD-like domain
AC880_RS15465	SM00958	SecA preprotein cross-linking domain
AC880_RS15485	SM00864	Tubulin/FtsZ family, GTPase domain
AC880_RS15485	SM00865	Tubulin/FtsZ family, C-terminal domain
AC880_RS15490	SM00842	Cell division protein FtsA
AC880_RS15560	SM00382	ATPases associated with a variety of cellular activities
AC880_RS15575	SM00151	SWI complex, BAF60b domains
AC880_RS15610	SM00344	helix_turn_helix ASNC type
AC880_RS15720	SM00382	ATPases associated with a variety of cellular activities
AC880_RS15720	SM01086	C-terminal, D2-small domain, of ClpB protein
AC880_RS15735	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AC880_RS15750	SM00382	ATPases associated with a variety of cellular activities
AC880_RS15820	SM00996	S-adenosyl-L-homocysteine hydrolase
AC880_RS15820	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AC880_RS15875	SM00487	DEAD-like helicases superfamily
AC880_RS15875	SM00490	helicase superfamily c-terminal domain
AC880_RS15880	SM00986	Uracil DNA glycosylase superfamily
AC880_RS15880	SM00987	UreE urease accessory protein, C-terminal domain 
AC880_RS15895	SM00155	Phospholipase D. Active site motifs.
AC880_RS15900	SM00382	ATPases associated with a variety of cellular activities
AC880_RS15945	SM00344	helix_turn_helix ASNC type
AC880_RS15945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS15990	SM00422	helix_turn_helix, mercury resistance
AC880_RS15990	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS16035	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS16045	SM00869	Autotransporter beta-domain
AC880_RS16150	SM01400	AC880_RS16150
AC880_RS16170	SM00028	Tetratricopeptide repeats
AC880_RS16175	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AC880_RS16175	SM01232	AC880_RS16175
AC880_RS16180	SM00849	Metallo-beta-lactamase superfamily
AC880_RS16215	SM00387	Histidine kinase-like ATPases
AC880_RS16215	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS16220	SM00448	cheY-homologous receiver domain
AC880_RS16220	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS16280	SM00984	UDP binding domain
AC880_RS16310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS16365	SM00988	UreE urease accessory protein, N-terminal domain
AC880_RS16395	SM00422	helix_turn_helix, mercury resistance
AC880_RS16415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS16415	SM00866	AC880_RS16415
AC880_RS16495	SM00382	ATPases associated with a variety of cellular activities
AC880_RS16500	SM00382	ATPases associated with a variety of cellular activities
AC880_RS16510	SM00822	AC880_RS16510
AC880_RS16600	SM00849	Metallo-beta-lactamase superfamily
AC880_RS16605	SM00257	Lysin motif
AC880_RS16645	SM00448	cheY-homologous receiver domain
AC880_RS16645	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS16650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS16650	SM00387	Histidine kinase-like ATPases
AC880_RS16740	SM00382	ATPases associated with a variety of cellular activities
AC880_RS16775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS16775	SM00866	AC880_RS16775
AC880_RS16800	SM00903	Flavin reductase like domain
AC880_RS16875	SM00925	MltA specific insert domain
AC880_RS16905	SM00905	Dihydroneopterin aldolase
AC880_RS16915	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC880_RS16975	SM00382	ATPases associated with a variety of cellular activities
AC880_RS16995	SM00487	DEAD-like helicases superfamily
AC880_RS16995	SM00490	helicase superfamily c-terminal domain
AC880_RS17020	SM00382	ATPases associated with a variety of cellular activities
AC880_RS17135	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS17175	SM00155	Phospholipase D. Active site motifs.
AC880_RS17195	SM00834	Putative regulatory protein
AC880_RS17230	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC880_RS17250	SM00382	ATPases associated with a variety of cellular activities
AC880_RS17305	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC880_RS17310	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AC880_RS17340	SM00937	AC880_RS17340
AC880_RS17375	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS17385	SM00881	CoA binding domain
AC880_RS17410	SM00344	helix_turn_helix ASNC type
AC880_RS17440	SM00881	CoA binding domain
AC880_RS17450	SM00829	Enoylreductase
AC880_RS17525	SM01130	AC880_RS17525
AC880_RS17585	SM00881	CoA binding domain
AC880_RS17590	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS17600	SM00861	Transketolase, pyrimidine binding domain
AC880_RS17640	SM00382	ATPases associated with a variety of cellular activities
AC880_RS17645	SM00382	ATPases associated with a variety of cellular activities
AC880_RS17675	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS17700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC880_RS17700	SM00245	tail specific protease
AC880_RS17710	SM00855	Phosphoglycerate mutase family
AC880_RS17715	SM00450	Rhodanese Homology Domain
AC880_RS17775	SM00382	ATPases associated with a variety of cellular activities
AC880_RS17795	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC880_RS17860	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC880_RS17875	SM00448	cheY-homologous receiver domain
AC880_RS17880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC880_RS17880	SM00387	Histidine kinase-like ATPases
AC880_RS17880	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS17955	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS17975	SM00344	helix_turn_helix ASNC type
AC880_RS18030	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC880_RS18050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS18050	SM00895	AC880_RS18050
AC880_RS18095	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS18115	SM00869	Autotransporter beta-domain
AC880_RS18145	SM01119	AC880_RS18145
AC880_RS18155	SM00244	prohibitin homologues
AC880_RS18250	SM00387	Histidine kinase-like ATPases
AC880_RS18250	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS18285	SM01234	AC880_RS18285
AC880_RS18300	SM00382	ATPases associated with a variety of cellular activities
AC880_RS18300	SM00760	Bacterial dnaA protein helix-turn-helix domain
AC880_RS18305	SM00480	DNA polymerase III beta subunit
AC880_RS18310	SM00387	Histidine kinase-like ATPases
AC880_RS18310	SM00433	TopoisomeraseII
AC880_RS18315	SM00346	helix_turn_helix isocitrate lyase regulation
AC880_RS18340	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS18340	SM00871	Bacterial transcription activator, effector binding domain
AC880_RS18360	SM00422	helix_turn_helix, mercury resistance
AC880_RS18365	SM00849	Metallo-beta-lactamase superfamily
AC880_RS18395	SM00878	Biotin carboxylase C-terminal domain
AC880_RS18395	SM01209	AC880_RS18395
AC880_RS18415	SM01119	AC880_RS18415
AC880_RS18450	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AC880_RS18450	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AC880_RS18450	SM00493	AC880_RS18450
AC880_RS18460	SM00382	ATPases associated with a variety of cellular activities
AC880_RS18490	SM00344	helix_turn_helix ASNC type
AC880_RS18500	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
AC880_RS18520	SM01018	B12 binding domain
AC880_RS18600	SM00838	Elongation factor G C-terminus
AC880_RS18600	SM00889	Elongation factor G, domain IV
AC880_RS18610	SM01403	AC880_RS18610
AC880_RS18630	SM01382	AC880_RS18630
AC880_RS18630	SM01383	AC880_RS18630
AC880_RS18645	SM00322	K homology RNA-binding domain
AC880_RS18680	SM01374	AC880_RS18680
AC880_RS18755	SM00363	S4 RNA-binding domain
AC880_RS18755	SM01390	AC880_RS18755
AC880_RS18760	SM00662	RNA polymerases D
AC880_RS18790	SM01004	Delta-aminolevulinic acid dehydratase
AC880_RS18825	SM01219	AC880_RS18825
AC880_RS18845	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC880_RS18895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS18895	SM00866	AC880_RS18895
AC880_RS18940	SM00382	ATPases associated with a variety of cellular activities
AC880_RS18965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS18965	SM00895	AC880_RS18965
AC880_RS18995	SM01130	AC880_RS18995
AC880_RS19010	SM00257	Lysin motif
AC880_RS19065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS19075	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS19080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC880_RS19095	SM00382	ATPases associated with a variety of cellular activities
AC880_RS19110	SM00829	Enoylreductase
AC880_RS19160	SM00382	ATPases associated with a variety of cellular activities
AC880_RS19210	SM00984	UDP binding domain
AC880_RS19300	SM00100	Cyclic nucleotide-monophosphate binding domain
AC880_RS19325	SM00829	Enoylreductase
AC880_RS19355	SM00382	ATPases associated with a variety of cellular activities
AC880_RS19465	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS19555	SM00342	helix_turn_helix, arabinose operon control protein
AC880_RS19670	SM00421	helix_turn_helix, Lux Regulon
AC880_RS19710	SM00382	ATPases associated with a variety of cellular activities
AC880_RS19725	SM00062	Bacterial periplasmic substrate-binding proteins
AC880_RS19730	SM00382	ATPases associated with a variety of cellular activities
AC880_RS19750	SM00478	endonuclease III
AC880_RS19755	SM00530	Helix-turn-helix XRE-family like proteins 
AC880_RS19830	SM01060	AC880_RS19830
AC880_RS19840	SM00382	ATPases associated with a variety of cellular activities
AC880_RS19860	SM00382	ATPases associated with a variety of cellular activities
AC880_RS19865	SM00382	ATPases associated with a variety of cellular activities
AC880_RS19895	SM00448	cheY-homologous receiver domain
AC880_RS19895	SM00862	Transcriptional regulatory protein, C terminal
AC880_RS19900	SM00387	Histidine kinase-like ATPases
AC880_RS19900	SM00388	His Kinase A (phosphoacceptor) domain
AC880_RS19925	SM00357	Cold shock protein domain
