locus-tag class description AC884_RS00005 PF13932 GidA associated domain AC884_RS00005 PF01134 Glucose inhibited division protein A AC884_RS00010 PF02527 rRNA small subunit methyltransferase G AC884_RS00015 PF13614 AAA domain AC884_RS00025 PF17762 HTH domain found in ParB protein AC884_RS00025 PF02195 ParB-like nuclease domain AC884_RS00030 PF00710 Asparaginase, N-terminal AC884_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain AC884_RS00035 PF00710 Asparaginase, N-terminal AC884_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain AC884_RS00055 PF00009 Elongation factor Tu GTP binding domain AC884_RS00055 PF03144 Elongation factor Tu domain 2 AC884_RS00055 PF03143 Elongation factor Tu C-terminal domain AC884_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AC884_RS00070 PF00467 KOW motif AC884_RS00070 PF02357 Transcription termination factor nusG AC884_RS00075 PF03946 Ribosomal protein L11, N-terminal domain AC884_RS00075 PF00298 Ribosomal protein L11, RNA binding domain AC884_RS00080 PF00687 Ribosomal protein L1p/L10e family AC884_RS00085 PF00466 Ribosomal protein L10 AC884_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain AC884_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain AC884_RS00095 PF00562 RNA polymerase Rpb2, domain 6 AC884_RS00095 PF10385 RNA polymerase beta subunit external 1 domain AC884_RS00095 PF04565 RNA polymerase Rpb2, domain 3 AC884_RS00095 PF04561 RNA polymerase Rpb2, domain 2 AC884_RS00095 PF04560 RNA polymerase Rpb2, domain 7 AC884_RS00095 PF04563 RNA polymerase beta subunit AC884_RS00100 PF05000 RNA polymerase Rpb1, domain 4 AC884_RS00100 PF04997 RNA polymerase Rpb1, domain 1 AC884_RS00100 PF04983 RNA polymerase Rpb1, domain 3 AC884_RS00100 PF04998 RNA polymerase Rpb1, domain 5 AC884_RS00100 PF00623 RNA polymerase Rpb1, domain 2 AC884_RS00130 PF00486 Transcriptional regulatory protein, C terminal AC884_RS00130 PF00072 Response regulator receiver domain AC884_RS00140 PF02515 CoA-transferase family III AC884_RS00155 PF01575 MaoC like domain AC884_RS00160 PF03466 LysR substrate binding domain AC884_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS00165 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit AC884_RS00190 PF05746 DALR anticodon binding domain AC884_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit AC884_RS00200 PF01553 Acyltransferase AC884_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC884_RS00215 PF01327 Polypeptide deformylase AC884_RS00250 PF02615 Malate/L-lactate dehydrogenase AC884_RS00255 PF00561 alpha/beta hydrolase fold AC884_RS00260 PF00561 alpha/beta hydrolase fold AC884_RS00260 PF07021 Methionine biosynthesis protein MetW AC884_RS00275 PF07690 Major Facilitator Superfamily AC884_RS00285 PF01177 Asp/Glu/Hydantoin racemase AC884_RS00290 PF00005 ABC transporter AC884_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS00305 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS00340 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS00355 PF00970 Oxidoreductase FAD-binding domain AC884_RS00355 PF00175 Oxidoreductase NAD-binding domain AC884_RS00355 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS00360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS00370 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS00400 PF00183 Hsp90 protein AC884_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS00405 PF13417 Glutathione S-transferase, N-terminal domain AC884_RS00405 PF00043 Glutathione S-transferase, C-terminal domain AC884_RS00410 PF01510 N-acetylmuramoyl-L-alanine amidase AC884_RS00420 PF01578 Cytochrome C assembly protein AC884_RS00425 PF00448 SRP54-type protein, GTPase domain AC884_RS00425 PF02881 SRP54-type protein, helical bundle domain AC884_RS00425 PF02978 Signal peptide binding domain AC884_RS00440 PF02719 Polysaccharide biosynthesis protein AC884_RS00450 PF10997 Alternate to MurJ AC884_RS00455 PF00534 Glycosyl transferases group 1 AC884_RS00455 PF00862 Sucrose synthase AC884_RS00460 PF02397 Bacterial sugar transferase AC884_RS00465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC884_RS00475 PF02350 UDP-N-acetylglucosamine 2-epimerase AC884_RS00480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC884_RS00485 PF00132 Bacterial transferase hexapeptide (six repeats) AC884_RS00490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AC884_RS00490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC884_RS00495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AC884_RS00500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AC884_RS00500 PF00534 Glycosyl transferases group 1 AC884_RS00510 PF03309 Type III pantothenate kinase AC884_RS00520 PF02405 Permease MlaE AC884_RS00525 PF00005 ABC transporter AC884_RS00545 PF07943 Penicillin-binding protein 5, C-terminal domain AC884_RS00545 PF00768 D-alanyl-D-alanine carboxypeptidase AC884_RS00550 PF01063 Amino-transferase class IV AC884_RS00555 PF04359 Protein of unknown function (DUF493) AC884_RS00560 PF03099 Biotin/lipoate A/B protein ligase family AC884_RS00565 PF04055 Radical SAM superfamily AC884_RS00565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AC884_RS00570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AC884_RS00575 PF04321 RmlD substrate binding domain AC884_RS00580 PF16363 GDP-mannose 4,6 dehydratase AC884_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme AC884_RS00600 PF01323 DSBA-like thioredoxin domain AC884_RS00600 PF00085 Thioredoxin AC884_RS00610 PF03485 Arginyl tRNA synthetase N terminal domain AC884_RS00610 PF05746 DALR anticodon binding domain AC884_RS00610 PF00750 tRNA synthetases class I (R) AC884_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS00640 PF13416 Bacterial extracellular solute-binding protein AC884_RS00645 PF17912 MalK OB fold domain AC884_RS00645 PF00005 ABC transporter AC884_RS00650 PF00149 Calcineurin-like phosphoesterase AC884_RS00660 PF12857 TOBE-like domain AC884_RS00660 PF00005 ABC transporter AC884_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS00680 PF00356 Bacterial regulatory proteins, lacI family AC884_RS00690 PF01425 Amidase AC884_RS00695 PF00682 HMGL-like AC884_RS00695 PF08502 LeuA allosteric (dimerisation) domain AC884_RS00705 PF04963 Sigma-54 factor, core binding domain AC884_RS00705 PF00309 Sigma-54 factor, Activator interacting domain (AID) AC884_RS00705 PF04552 Sigma-54, DNA binding domain AC884_RS00715 PF03466 LysR substrate binding domain AC884_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS00730 PF13609 Gram-negative porin AC884_RS00735 PF00585 C-terminal regulatory domain of Threonine dehydratase AC884_RS00735 PF00291 Pyridoxal-phosphate dependent enzyme AC884_RS00750 PF00392 Bacterial regulatory proteins, gntR family AC884_RS00750 PF07729 FCD domain AC884_RS00755 PF02515 CoA-transferase family III AC884_RS00765 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS00775 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS00785 PF03746 LamB/YcsF family AC884_RS00790 PF02626 Carboxyltransferase domain, subdomain A and B AC884_RS00795 PF02682 Carboxyltransferase domain, subdomain C and D AC884_RS00805 PF03466 LysR substrate binding domain AC884_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS00810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC884_RS00810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC884_RS00810 PF01842 ACT domain AC884_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS00820 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS00820 PF00672 HAMP domain AC884_RS00825 PF00486 Transcriptional regulatory protein, C terminal AC884_RS00825 PF00072 Response regulator receiver domain AC884_RS00830 PF11808 Phosphate regulon sensor protein PhoR AC884_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS00830 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS00830 PF00989 PAS fold AC884_RS00835 PF00072 Response regulator receiver domain AC884_RS00835 PF00486 Transcriptional regulatory protein, C terminal AC884_RS00840 PF01209 ubiE/COQ5 methyltransferase family AC884_RS00855 PF03109 ABC1 family AC884_RS00870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS00870 PF00005 ABC transporter AC884_RS00875 PF04536 TPM domain AC884_RS00885 PF00271 Helicase conserved C-terminal domain AC884_RS00885 PF00270 DEAD/DEAH box helicase AC884_RS00890 PF01810 LysE type translocator AC884_RS00895 PF03144 Elongation factor Tu domain 2 AC884_RS00895 PF16658 Class II release factor RF3, C-terminal domain AC884_RS00895 PF00009 Elongation factor Tu GTP binding domain AC884_RS00905 PF00210 Ferritin-like domain AC884_RS00930 PF00581 Rhodanese-like domain AC884_RS00930 PF17773 UPF0176 acylphosphatase like domain AC884_RS00935 PF09334 tRNA synthetases class I (M) AC884_RS00935 PF01588 Putative tRNA binding domain AC884_RS00945 PF10609 NUBPL iron-transfer P-loop NTPase AC884_RS00960 PF00692 dUTPase AC884_RS00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AC884_RS00985 PF01276 Orn/Lys/Arg decarboxylase, major domain AC884_RS00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AC884_RS01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC884_RS01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC884_RS01005 PF02535 ZIP Zinc transporter AC884_RS01010 PF08669 Glycine cleavage T-protein C-terminal barrel domain AC884_RS01010 PF01571 Aminomethyltransferase folate-binding domain AC884_RS01015 PF01597 Glycine cleavage H-protein AC884_RS01020 PF02347 Glycine cleavage system P-protein AC884_RS01025 PF07729 FCD domain AC884_RS01025 PF00392 Bacterial regulatory proteins, gntR family AC884_RS01030 PF02515 CoA-transferase family III AC884_RS01040 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS01060 PF12146 Serine aminopeptidase, S33 AC884_RS01070 PF02426 Muconolactone delta-isomerase AC884_RS01075 PF01144 Coenzyme A transferase AC884_RS01080 PF01144 Coenzyme A transferase AC884_RS01085 PF09339 IclR helix-turn-helix domain AC884_RS01085 PF01614 Bacterial transcriptional regulator AC884_RS01095 PF02667 Short chain fatty acid transporter AC884_RS01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC884_RS01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC884_RS01105 PF00082 Subtilase family AC884_RS01105 PF03797 Autotransporter beta-domain AC884_RS01110 PF00311 Phosphoenolpyruvate carboxylase AC884_RS01115 PF06508 Queuosine biosynthesis protein QueC AC884_RS01145 PF02913 FAD linked oxidases, C-terminal domain AC884_RS01145 PF01565 FAD binding domain AC884_RS01150 PF00171 Aldehyde dehydrogenase family AC884_RS01155 PF13667 ThiC-associated domain AC884_RS01155 PF01964 Radical SAM ThiC family AC884_RS01160 PF02355 Protein export membrane protein AC884_RS01160 PF07549 SecD/SecF GG Motif AC884_RS01165 PF09518 HindIII restriction endonuclease AC884_RS01195 PF02627 Carboxymuconolactone decarboxylase family AC884_RS01200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC884_RS01200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC884_RS01205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC884_RS01205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC884_RS01210 PF00392 Bacterial regulatory proteins, gntR family AC884_RS01210 PF07702 UTRA domain AC884_RS01215 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS01220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS01230 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS01235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AC884_RS01240 PF12627 Probable RNA and SrmB- binding site of polymerase A AC884_RS01240 PF12626 Polymerase A arginine-rich C-terminus AC884_RS01240 PF01743 Poly A polymerase head domain AC884_RS01250 PF00308 Bacterial dnaA protein AC884_RS01255 PF00586 AIR synthase related protein, N-terminal domain AC884_RS01255 PF02769 AIR synthase related protein, C-terminal domain AC884_RS01265 PF08676 MutL C terminal dimerisation domain AC884_RS01265 PF01119 DNA mismatch repair protein, C-terminal domain AC884_RS01270 PF09335 SNARE associated Golgi protein AC884_RS01275 PF11741 AMIN domain AC884_RS01275 PF01520 N-acetylmuramoyl-L-alanine amidase AC884_RS01280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AC884_RS01285 PF10415 Fumarase C C-terminus AC884_RS01285 PF00206 Lyase AC884_RS01295 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS01300 PF03466 LysR substrate binding domain AC884_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS01310 PF02515 CoA-transferase family III AC884_RS01315 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS01320 PF18158 Adaptive response protein AidB N-terminal domain AC884_RS01320 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS01320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS01340 PF01654 Cytochrome bd terminal oxidase subunit I AC884_RS01345 PF02322 Cytochrome bd terminal oxidase subunit II AC884_RS01350 PF08173 Membrane bound YbgT-like protein AC884_RS01355 PF00664 ABC transporter transmembrane region AC884_RS01355 PF00005 ABC transporter AC884_RS01360 PF00664 ABC transporter transmembrane region AC884_RS01360 PF00005 ABC transporter AC884_RS01365 PF00156 Phosphoribosyl transferase domain AC884_RS01380 PF13609 Gram-negative porin AC884_RS01410 PF04386 Stringent starvation protein B AC884_RS01415 PF00043 Glutathione S-transferase, C-terminal domain AC884_RS01415 PF02798 Glutathione S-transferase, N-terminal domain AC884_RS01420 PF02167 Cytochrome C1 family AC884_RS01425 PF00033 Cytochrome b/b6/petB AC884_RS01425 PF00032 Cytochrome b(C-terminal)/b6/petD AC884_RS01430 PF00355 Rieske [2Fe-2S] domain AC884_RS01430 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AC884_RS01435 PF01741 Large-conductance mechanosensitive channel, MscL AC884_RS01440 PF01784 NIF3 (NGG1p interacting factor 3) AC884_RS01445 PF13180 PDZ domain AC884_RS01455 PF04299 Putative FMN-binding domain AC884_RS01460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC884_RS01465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS01470 PF07859 alpha/beta hydrolase fold AC884_RS01480 PF00682 HMGL-like AC884_RS01480 PF08502 LeuA allosteric (dimerisation) domain AC884_RS01485 PF12833 Helix-turn-helix domain AC884_RS01490 PF00920 Dehydratase family AC884_RS01495 PF07690 Major Facilitator Superfamily AC884_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS01500 PF03466 LysR substrate binding domain AC884_RS01510 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AC884_RS01540 PF07859 alpha/beta hydrolase fold AC884_RS01550 PF02653 Branched-chain amino acid transport system / permease component AC884_RS01555 PF02653 Branched-chain amino acid transport system / permease component AC884_RS01555 PF11862 Domain of unknown function (DUF3382) AC884_RS01560 PF00005 ABC transporter AC884_RS01560 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS01565 PF00005 ABC transporter AC884_RS01580 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS01585 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS01585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS01585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS01590 PF13193 AMP-binding enzyme C-terminal domain AC884_RS01590 PF00501 AMP-binding enzyme AC884_RS01610 PF00202 Aminotransferase class-III AC884_RS01615 PF02581 Thiamine monophosphate synthase AC884_RS01620 PF08543 Phosphomethylpyrimidine kinase AC884_RS01625 PF00301 Rubredoxin AC884_RS01630 PF02622 Uncharacterized ACR, COG1678 AC884_RS01635 PF03652 Holliday junction resolvase AC884_RS01640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC884_RS01640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC884_RS01645 PF01979 Amidohydrolase family AC884_RS01650 PF01553 Acyltransferase AC884_RS01655 PF00149 Calcineurin-like phosphoesterase AC884_RS01665 PF00912 Transglycosylase AC884_RS01680 PF13193 AMP-binding enzyme C-terminal domain AC884_RS01680 PF00501 AMP-binding enzyme AC884_RS01685 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS01700 PF12706 Beta-lactamase superfamily domain AC884_RS01705 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS01710 PF03466 LysR substrate binding domain AC884_RS01720 PF11737 Protein of unknown function (DUF3300) AC884_RS01730 PF00990 Diguanylate cyclase, GGDEF domain AC884_RS01730 PF00563 EAL domain AC884_RS01730 PF03707 Bacterial signalling protein N terminal repeat AC884_RS01735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AC884_RS01735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AC884_RS01740 PF13532 2OG-Fe(II) oxygenase superfamily AC884_RS01745 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AC884_RS01750 PF04463 Protein of unknown function (DUF523) AC884_RS01755 PF00005 ABC transporter AC884_RS01760 PF01032 FecCD transport family AC884_RS01765 PF01497 Periplasmic binding protein AC884_RS01770 PF05171 Haemin-degrading HemS.ChuX domain AC884_RS01775 PF07715 TonB-dependent Receptor Plug Domain AC884_RS01775 PF04886 PT repeat AC884_RS01775 PF00593 TonB dependent receptor AC884_RS01780 PF16220 Domain of unknown function (DUF4880) AC884_RS01780 PF04773 FecR protein AC884_RS01785 PF04542 Sigma-70 region 2 AC884_RS01785 PF08281 Sigma-70, region 4 AC884_RS01810 PF02423 Ornithine cyclodeaminase/mu-crystallin family AC884_RS01820 PF00392 Bacterial regulatory proteins, gntR family AC884_RS01820 PF07729 FCD domain AC884_RS01840 PF00171 Aldehyde dehydrogenase family AC884_RS01850 PF00175 Oxidoreductase NAD-binding domain AC884_RS01850 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS01850 PF00970 Oxidoreductase FAD-binding domain AC884_RS01875 PF03458 UPF0126 domain AC884_RS01880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AC884_RS01880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC884_RS01885 PF03372 Endonuclease/Exonuclease/phosphatase family AC884_RS01890 PF00156 Phosphoribosyl transferase domain AC884_RS01895 PF02934 GatB/GatE catalytic domain AC884_RS01895 PF02637 GatB domain AC884_RS01900 PF01425 Amidase AC884_RS01905 PF02686 Glu-tRNAGln amidotransferase C subunit AC884_RS01915 PF04085 rod shape-determining protein MreC AC884_RS01925 PF00905 Penicillin binding protein transpeptidase domain AC884_RS01925 PF03717 Penicillin-binding Protein dimerisation domain AC884_RS01930 PF01098 Cell cycle protein AC884_RS01935 PF02615 Malate/L-lactate dehydrogenase AC884_RS01940 PF00939 Sodium:sulfate symporter transmembrane region AC884_RS01945 PF00440 Bacterial regulatory proteins, tetR family AC884_RS01955 PF00696 Amino acid kinase family AC884_RS01960 PF03180 NLPA lipoprotein AC884_RS01965 PF00578 AhpC/TSA family AC884_RS01970 PF04972 BON domain AC884_RS01975 PF13580 SIS domain AC884_RS01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC884_RS01990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AC884_RS01990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AC884_RS02010 PF02515 CoA-transferase family III AC884_RS02015 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS02020 PF02515 CoA-transferase family III AC884_RS02035 PF09339 IclR helix-turn-helix domain AC884_RS02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS02050 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS02055 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS02055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC884_RS02055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC884_RS02060 PF02515 CoA-transferase family III AC884_RS02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS02065 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS02070 PF03466 LysR substrate binding domain AC884_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS02090 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS02100 PF00892 EamA-like transporter family AC884_RS02105 PF01810 LysE type translocator AC884_RS02110 PF12146 Serine aminopeptidase, S33 AC884_RS02130 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AC884_RS02135 PF00535 Glycosyl transferase family 2 AC884_RS02155 PF03616 Sodium/glutamate symporter AC884_RS02165 PF02667 Short chain fatty acid transporter AC884_RS02180 PF00929 Exonuclease AC884_RS02185 PF00873 AcrB/AcrD/AcrF family AC884_RS02195 PF14492 Elongation Factor G, domain II AC884_RS02195 PF03144 Elongation factor Tu domain 2 AC884_RS02195 PF00679 Elongation factor G C-terminus AC884_RS02195 PF00009 Elongation factor Tu GTP binding domain AC884_RS02195 PF03764 Elongation factor G, domain IV AC884_RS02200 PF00582 Universal stress protein family AC884_RS02210 PF00392 Bacterial regulatory proteins, gntR family AC884_RS02210 PF00155 Aminotransferase class I and II AC884_RS02215 PF03764 Elongation factor G, domain IV AC884_RS02215 PF00009 Elongation factor Tu GTP binding domain AC884_RS02215 PF00679 Elongation factor G C-terminus AC884_RS02215 PF03144 Elongation factor Tu domain 2 AC884_RS02215 PF14492 Elongation Factor G, domain II AC884_RS02220 PF02308 MgtC family AC884_RS02225 PF03741 Integral membrane protein TerC family AC884_RS02225 PF03471 Transporter associated domain AC884_RS02230 PF02515 CoA-transferase family III AC884_RS02235 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS02240 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS02245 PF03466 LysR substrate binding domain AC884_RS02245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS02250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS02250 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS02250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS02260 PF02803 Thiolase, C-terminal domain AC884_RS02260 PF00108 Thiolase, N-terminal domain AC884_RS02280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS02280 PF03466 LysR substrate binding domain AC884_RS02285 PF00313 'Cold-shock' DNA-binding domain AC884_RS02295 PF00392 Bacterial regulatory proteins, gntR family AC884_RS02295 PF07729 FCD domain AC884_RS02300 PF00171 Aldehyde dehydrogenase family AC884_RS02305 PF02667 Short chain fatty acid transporter AC884_RS02310 PF00175 Oxidoreductase NAD-binding domain AC884_RS02310 PF00042 Globin AC884_RS02310 PF00970 Oxidoreductase FAD-binding domain AC884_RS02315 PF01042 Endoribonuclease L-PSP AC884_RS02320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS02320 PF03466 LysR substrate binding domain AC884_RS02330 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS02335 PF02515 CoA-transferase family III AC884_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS02345 PF03466 LysR substrate binding domain AC884_RS02350 PF02515 CoA-transferase family III AC884_RS02360 PF01794 Ferric reductase like transmembrane component AC884_RS02365 PF00174 Oxidoreductase molybdopterin binding domain AC884_RS02370 PF13419 Haloacid dehalogenase-like hydrolase AC884_RS02375 PF01479 S4 domain AC884_RS02375 PF00849 RNA pseudouridylate synthase AC884_RS02380 PF10150 Ribonuclease E/G family AC884_RS02380 PF00575 S1 RNA binding domain AC884_RS02380 PF12111 Polyribonucleotide phosphorylase C terminal AC884_RS02395 PF09411 Lipid A 3-O-deacylase (PagL) AC884_RS02400 PF01039 Carboxyl transferase domain AC884_RS02400 PF17848 Acetyl-coA carboxylase zinc finger domain AC884_RS02405 PF00290 Tryptophan synthase alpha chain AC884_RS02410 PF00291 Pyridoxal-phosphate dependent enzyme AC884_RS02415 PF01546 Peptidase family M20/M25/M40 AC884_RS02415 PF07687 Peptidase dimerisation domain AC884_RS02420 PF02824 TGS domain AC884_RS02420 PF04607 Region found in RelA / SpoT proteins AC884_RS02420 PF13291 ACT domain AC884_RS02425 PF06167 Glucose-regulated metallo-peptidase M90 AC884_RS02435 PF01042 Endoribonuclease L-PSP AC884_RS02440 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AC884_RS02440 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AC884_RS02445 PF00037 4Fe-4S binding domain AC884_RS02445 PF11953 Domain of unknown function (DUF3470) AC884_RS02450 PF00970 Oxidoreductase FAD-binding domain AC884_RS02450 PF00175 Oxidoreductase NAD-binding domain AC884_RS02460 PF04060 Putative Fe-S cluster AC884_RS02465 PF10576 Iron-sulfur binding domain of endonuclease III AC884_RS02465 PF00730 HhH-GPD superfamily base excision DNA repair protein AC884_RS02465 PF00633 Helix-hairpin-helix motif AC884_RS02470 PF00005 ABC transporter AC884_RS02470 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS02475 PF00005 ABC transporter AC884_RS02485 PF02653 Branched-chain amino acid transport system / permease component AC884_RS02500 PF01063 Amino-transferase class IV AC884_RS02505 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS02505 PF00005 ABC transporter AC884_RS02520 PF02632 BioY family AC884_RS02525 PF02361 Cobalt transport protein AC884_RS02530 PF00005 ABC transporter AC884_RS02535 PF01641 SelR domain AC884_RS02540 PF04279 Intracellular septation protein A AC884_RS02555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AC884_RS02555 PF03120 NAD-dependent DNA ligase OB-fold domain AC884_RS02555 PF01653 NAD-dependent DNA ligase adenylation domain AC884_RS02555 PF12826 Helix-hairpin-helix motif AC884_RS02555 PF00533 BRCA1 C Terminus (BRCT) domain AC884_RS02565 PF02463 RecF/RecN/SMC N terminal domain AC884_RS02565 PF06470 SMC proteins Flexible Hinge Domain AC884_RS02570 PF07690 Major Facilitator Superfamily AC884_RS02575 PF03167 Uracil DNA glycosylase superfamily AC884_RS02580 PF00814 Glycoprotease family AC884_RS02585 PF00072 Response regulator receiver domain AC884_RS02585 PF00486 Transcriptional regulatory protein, C terminal AC884_RS02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS02600 PF00672 HAMP domain AC884_RS02600 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS02605 PF00578 AhpC/TSA family AC884_RS02610 PF02627 Carboxymuconolactone decarboxylase family AC884_RS02620 PF07690 Major Facilitator Superfamily AC884_RS02630 PF00392 Bacterial regulatory proteins, gntR family AC884_RS02630 PF07729 FCD domain AC884_RS02645 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS02650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC884_RS02650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC884_RS02660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS02660 PF03466 LysR substrate binding domain AC884_RS02670 PF00202 Aminotransferase class-III AC884_RS02675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC884_RS02675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC884_RS02680 PF00764 Arginosuccinate synthase AC884_RS02685 PF02705 K+ potassium transporter AC884_RS02690 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS02690 PF08521 Two-component sensor kinase N-terminal AC884_RS02695 PF00072 Response regulator receiver domain AC884_RS02695 PF00486 Transcriptional regulatory protein, C terminal AC884_RS02700 PF02472 Biopolymer transport protein ExbD/TolR AC884_RS02705 PF01618 MotA/TolQ/ExbB proton channel family AC884_RS02720 PF00216 Bacterial DNA-binding protein AC884_RS02725 PF18331 PKHD-type hydroxylase C-terminal domain AC884_RS02725 PF13640 2OG-Fe(II) oxygenase superfamily AC884_RS02730 PF01053 Cys/Met metabolism PLP-dependent enzyme AC884_RS02735 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC884_RS02735 PF00588 SpoU rRNA Methylase family AC884_RS02740 PF00575 S1 RNA binding domain AC884_RS02740 PF08206 Ribonuclease B OB domain AC884_RS02740 PF00773 RNB domain AC884_RS02740 PF08461 Ribonuclease R winged-helix domain AC884_RS02740 PF17876 Cold shock domain AC884_RS02760 PF13673 Acetyltransferase (GNAT) domain AC884_RS02765 PF03547 Membrane transport protein AC884_RS02770 PF04143 Sulphur transport AC884_RS02775 PF01645 Conserved region in glutamate synthase AC884_RS02785 PF13396 Phospholipase_D-nuclease N-terminal AC884_RS02785 PF13091 PLD-like domain AC884_RS02795 PF10017 Histidine-specific methyltransferase, SAM-dependent AC884_RS02800 PF12867 DinB superfamily AC884_RS02800 PF03781 Sulfatase-modifying factor enzyme 1 AC884_RS02830 PF00072 Response regulator receiver domain AC884_RS02835 PF00990 Diguanylate cyclase, GGDEF domain AC884_RS02850 PF00890 FAD binding domain AC884_RS02855 PF03466 LysR substrate binding domain AC884_RS02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS02865 PF00890 FAD binding domain AC884_RS02885 PF00166 Chaperonin 10 Kd subunit AC884_RS02890 PF00118 TCP-1/cpn60 chaperonin family AC884_RS02895 PF03212 Pertactin AC884_RS02895 PF03797 Autotransporter beta-domain AC884_RS02900 PF03631 Virulence factor BrkB AC884_RS02905 PF01219 Prokaryotic diacylglycerol kinase AC884_RS02910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS02915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AC884_RS02920 PF18146 Damage-inducible protein CinA KH domain AC884_RS02920 PF00994 Probable molybdopterin binding domain AC884_RS02920 PF02464 Competence-damaged protein AC884_RS02925 PF04608 Phosphatidylglycerophosphatase A AC884_RS02930 PF00586 AIR synthase related protein, N-terminal domain AC884_RS02930 PF02769 AIR synthase related protein, C-terminal domain AC884_RS02935 PF01029 NusB family AC884_RS02940 PF00885 6,7-dimethyl-8-ribityllumazine synthase AC884_RS02945 PF00925 GTP cyclohydrolase II AC884_RS02945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AC884_RS02965 PF00005 ABC transporter AC884_RS02975 PF00005 ABC transporter AC884_RS02980 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS03000 PF02881 SRP54-type protein, helical bundle domain AC884_RS03000 PF00448 SRP54-type protein, GTPase domain AC884_RS03010 PF01467 Cytidylyltransferase-like AC884_RS03015 PF00037 4Fe-4S binding domain AC884_RS03020 PF03594 Benzoate membrane transport protein AC884_RS03035 PF01022 Bacterial regulatory protein, arsR family AC884_RS03050 PF03466 LysR substrate binding domain AC884_RS03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS03065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS03065 PF00005 ABC transporter AC884_RS03070 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS03075 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS03085 PF00390 Malic enzyme, N-terminal domain AC884_RS03085 PF01515 Phosphate acetyl/butaryl transferase AC884_RS03085 PF03949 Malic enzyme, NAD binding domain AC884_RS03090 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AC884_RS03095 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS03100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS03100 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS03100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS03105 PF00392 Bacterial regulatory proteins, gntR family AC884_RS03105 PF07729 FCD domain AC884_RS03145 PF03466 LysR substrate binding domain AC884_RS03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS03155 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AC884_RS03160 PF04376 Arginine-tRNA-protein transferase, N terminus AC884_RS03160 PF04377 Arginine-tRNA-protein transferase, C terminus AC884_RS03165 PF01180 Dihydroorotate dehydrogenase AC884_RS03175 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS03180 PF18807 Tripartite Tc toxins repeat AC884_RS03180 PF05785 Rho-activating domain of cytotoxic necrotizing factor AC884_RS03185 PF09339 IclR helix-turn-helix domain AC884_RS03185 PF01614 Bacterial transcriptional regulator AC884_RS03190 PF00994 Probable molybdopterin binding domain AC884_RS03190 PF02464 Competence-damaged protein AC884_RS03190 PF18146 Damage-inducible protein CinA KH domain AC884_RS03210 PF00270 DEAD/DEAH box helicase AC884_RS03210 PF00271 Helicase conserved C-terminal domain AC884_RS03225 PF01063 Amino-transferase class IV AC884_RS03240 PF00561 alpha/beta hydrolase fold AC884_RS03245 PF01435 Peptidase family M48 AC884_RS03245 PF13181 Tetratricopeptide repeat AC884_RS03250 PF00483 Nucleotidyl transferase AC884_RS03260 PF13609 Gram-negative porin AC884_RS03285 PF00557 Metallopeptidase family M24 AC884_RS03285 PF05195 Aminopeptidase P, N-terminal domain AC884_RS03295 PF01494 FAD binding domain AC884_RS03300 PF01207 Dihydrouridine synthase (Dus) AC884_RS03305 PF02954 Bacterial regulatory protein, Fis family AC884_RS03310 PF02142 MGS-like domain AC884_RS03310 PF01808 AICARFT/IMPCHase bienzyme AC884_RS03315 PF02075 Crossover junction endodeoxyribonuclease RuvC AC884_RS03320 PF07499 RuvA, C-terminal domain AC884_RS03320 PF01330 RuvA N terminal domain AC884_RS03325 PF01370 NAD dependent epimerase/dehydratase family AC884_RS03330 PF00291 Pyridoxal-phosphate dependent enzyme AC884_RS03335 PF05491 RuvB C-terminal winged helix domain AC884_RS03335 PF17864 RuvB AAA lid domain AC884_RS03335 PF05496 Holliday junction DNA helicase RuvB P-loop domain AC884_RS03340 PF00270 DEAD/DEAH box helicase AC884_RS03340 PF00271 Helicase conserved C-terminal domain AC884_RS03340 PF00570 HRDC domain AC884_RS03340 PF09382 RQC domain AC884_RS03340 PF16124 RecQ zinc-binding AC884_RS03355 PF00484 Carbonic anhydrase AC884_RS03360 PF01425 Amidase AC884_RS03365 PF13458 Periplasmic binding protein AC884_RS03370 PF02653 Branched-chain amino acid transport system / permease component AC884_RS03375 PF02653 Branched-chain amino acid transport system / permease component AC884_RS03380 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS03380 PF00005 ABC transporter AC884_RS03385 PF00005 ABC transporter AC884_RS03390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AC884_RS03390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AC884_RS03400 PF03180 NLPA lipoprotein AC884_RS03545 PF06791 Prophage tail length tape measure protein AC884_RS03615 PF02586 SOS response associated peptidase (SRAP) AC884_RS03625 PF00072 Response regulator receiver domain AC884_RS03625 PF00486 Transcriptional regulatory protein, C terminal AC884_RS03630 PF00293 NUDIX domain AC884_RS03635 PF03129 Anticodon binding domain AC884_RS03635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC884_RS03635 PF04073 Aminoacyl-tRNA editing domain AC884_RS03640 PF03061 Thioesterase superfamily AC884_RS03645 PF01618 MotA/TolQ/ExbB proton channel family AC884_RS03650 PF02472 Biopolymer transport protein ExbD/TolR AC884_RS03660 PF07676 WD40-like Beta Propeller Repeat AC884_RS03660 PF04052 TolB amino-terminal domain AC884_RS03665 PF00691 OmpA family AC884_RS03675 PF01032 FecCD transport family AC884_RS03680 PF00005 ABC transporter AC884_RS03685 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS03690 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS03710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS03710 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS03710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS03710 PF09317 Domain of unknown function (DUF1974) AC884_RS03715 PF07670 Nucleoside recognition AC884_RS03720 PF02887 Pyruvate kinase, alpha/beta domain AC884_RS03720 PF00224 Pyruvate kinase, barrel domain AC884_RS03725 PF02595 Glycerate kinase family AC884_RS03730 PF00398 Ribosomal RNA adenine dimethylase AC884_RS03735 PF00639 PPIC-type PPIASE domain AC884_RS03735 PF09312 SurA N-terminal domain AC884_RS03740 PF04453 LPS transport system D AC884_RS03745 PF01636 Phosphotransferase enzyme family AC884_RS03750 PF00483 Nucleotidyl transferase AC884_RS03760 PF01329 Pterin 4 alpha carbinolamine dehydratase AC884_RS03765 PF00691 OmpA family AC884_RS03765 PF04972 BON domain AC884_RS03785 PF00202 Aminotransferase class-III AC884_RS03790 PF01425 Amidase AC884_RS03795 PF00005 ABC transporter AC884_RS03795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS03800 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS03805 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS03810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS03830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AC884_RS03835 PF03435 Saccharopine dehydrogenase NADP binding domain AC884_RS03835 PF16653 Saccharopine dehydrogenase C-terminal domain AC884_RS03845 PF04264 YceI-like domain AC884_RS03850 PF07715 TonB-dependent Receptor Plug Domain AC884_RS03850 PF00593 TonB dependent receptor AC884_RS03855 PF16220 Domain of unknown function (DUF4880) AC884_RS03855 PF04773 FecR protein AC884_RS03895 PF01472 PUA domain AC884_RS03895 PF00696 Amino acid kinase family AC884_RS03900 PF01926 50S ribosome-binding GTPase AC884_RS03900 PF01018 GTP1/OBG AC884_RS03905 PF01016 Ribosomal L27 protein AC884_RS03910 PF00829 Ribosomal prokaryotic L21 protein AC884_RS03920 PF00348 Polyprenyl synthetase AC884_RS03930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS03930 PF03466 LysR substrate binding domain AC884_RS03935 PF01968 Hydantoinase/oxoprolinase AC884_RS03935 PF05378 Hydantoinase/oxoprolinase N-terminal region AC884_RS03940 PF02538 Hydantoinase B/oxoprolinase AC884_RS03945 PF01266 FAD dependent oxidoreductase AC884_RS03950 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS03955 PF00171 Aldehyde dehydrogenase family AC884_RS03960 PF02794 RTX toxin acyltransferase family AC884_RS03970 PF03497 Anthrax toxin LF subunit AC884_RS03970 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AC884_RS03970 PF02382 N-terminal domain in RTX protein AC884_RS03975 PF00664 ABC transporter transmembrane region AC884_RS03975 PF00005 ABC transporter AC884_RS03975 PF03412 Peptidase C39 family AC884_RS03980 PF13533 Biotin-lipoyl like AC884_RS03985 PF02321 Outer membrane efflux protein AC884_RS03990 PF03466 LysR substrate binding domain AC884_RS03990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS03995 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS04000 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS04005 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS04010 PF00005 ABC transporter AC884_RS04015 PF01063 Amino-transferase class IV AC884_RS04035 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS04035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS04035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS04040 PF00392 Bacterial regulatory proteins, gntR family AC884_RS04040 PF07729 FCD domain AC884_RS04050 PF07729 FCD domain AC884_RS04050 PF00392 Bacterial regulatory proteins, gntR family AC884_RS04055 PF00107 Zinc-binding dehydrogenase AC884_RS04055 PF08240 Alcohol dehydrogenase GroES-like domain AC884_RS04060 PF13193 AMP-binding enzyme C-terminal domain AC884_RS04060 PF00501 AMP-binding enzyme AC884_RS04070 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS04075 PF00005 ABC transporter AC884_RS04080 PF09084 NMT1/THI5 like AC884_RS04090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS04090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS04090 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS04110 PF01433 Peptidase family M1 domain AC884_RS04110 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AC884_RS04110 PF11940 Domain of unknown function (DUF3458) Ig-like fold AC884_RS04115 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AC884_RS04125 PF02542 YgbB family AC884_RS04130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AC884_RS04135 PF00270 DEAD/DEAH box helicase AC884_RS04135 PF03461 TRCF domain AC884_RS04135 PF00271 Helicase conserved C-terminal domain AC884_RS04135 PF17757 UvrB interaction domain AC884_RS04135 PF02559 CarD-like/TRCF domain AC884_RS04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS04145 PF03466 LysR substrate binding domain AC884_RS04150 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS04155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS04155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS04155 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS04170 PF00593 TonB dependent receptor AC884_RS04170 PF07715 TonB-dependent Receptor Plug Domain AC884_RS04175 PF00593 TonB dependent receptor AC884_RS04175 PF07715 TonB-dependent Receptor Plug Domain AC884_RS04185 PF00361 Proton-conducting membrane transporter AC884_RS04190 PF00361 Proton-conducting membrane transporter AC884_RS04190 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AC884_RS04195 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC884_RS04195 PF00361 Proton-conducting membrane transporter AC884_RS04200 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC884_RS04205 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AC884_RS04210 PF12838 4Fe-4S dicluster domain AC884_RS04215 PF00146 NADH dehydrogenase AC884_RS04220 PF00384 Molybdopterin oxidoreductase AC884_RS04220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC884_RS04220 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AC884_RS04225 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC884_RS04225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC884_RS04225 PF10531 SLBB domain AC884_RS04235 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AC884_RS04240 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AC884_RS04245 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AC884_RS04250 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AC884_RS04255 PF13609 Gram-negative porin AC884_RS04285 PF01569 PAP2 superfamily AC884_RS04295 PF00781 Diacylglycerol kinase catalytic domain AC884_RS04300 PF03466 LysR substrate binding domain AC884_RS04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS04305 PF02028 BCCT, betaine/carnitine/choline family transporter AC884_RS04315 PF01638 HxlR-like helix-turn-helix AC884_RS04320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC884_RS04325 PF00873 AcrB/AcrD/AcrF family AC884_RS04330 PF02321 Outer membrane efflux protein AC884_RS04340 PF00127 Copper binding proteins, plastocyanin/azurin family AC884_RS04350 PF01968 Hydantoinase/oxoprolinase AC884_RS04350 PF05378 Hydantoinase/oxoprolinase N-terminal region AC884_RS04360 PF01266 FAD dependent oxidoreductase AC884_RS04365 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS04380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AC884_RS04385 PF01053 Cys/Met metabolism PLP-dependent enzyme AC884_RS04390 PF03466 LysR substrate binding domain AC884_RS04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS04405 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS04420 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS04425 PF07476 Methylaspartate ammonia-lyase C-terminus AC884_RS04425 PF05034 Methylaspartate ammonia-lyase N-terminus AC884_RS04435 PF02028 BCCT, betaine/carnitine/choline family transporter AC884_RS04445 PF03840 Preprotein translocase SecG subunit AC884_RS04450 PF00121 Triosephosphate isomerase AC884_RS04455 PF16197 Ketoacyl-synthetase C-terminal extension AC884_RS04455 PF00109 Beta-ketoacyl synthase, N-terminal domain AC884_RS04455 PF08990 Erythronolide synthase docking AC884_RS04455 PF00550 Phosphopantetheine attachment site AC884_RS04455 PF14765 Polyketide synthase dehydratase AC884_RS04455 PF08240 Alcohol dehydrogenase GroES-like domain AC884_RS04455 PF00698 Acyl transferase domain AC884_RS04455 PF02801 Beta-ketoacyl synthase, C-terminal domain AC884_RS04455 PF08659 KR domain AC884_RS04470 PF00291 Pyridoxal-phosphate dependent enzyme AC884_RS04470 PF13291 ACT domain AC884_RS04485 PF01138 3' exoribonuclease family, domain 1 AC884_RS04485 PF00575 S1 RNA binding domain AC884_RS04485 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AC884_RS04485 PF03725 3' exoribonuclease family, domain 2 AC884_RS04485 PF00013 KH domain AC884_RS04490 PF00312 Ribosomal protein S15 AC884_RS04505 PF01066 CDP-alcohol phosphatidyltransferase AC884_RS04510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AC884_RS04510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AC884_RS04515 PF10369 Small subunit of acetolactate synthase AC884_RS04520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS04520 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS04520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS04535 PF00005 ABC transporter AC884_RS04535 PF00664 ABC transporter transmembrane region AC884_RS04540 PF05724 Thiopurine S-methyltransferase (TPMT) AC884_RS04560 PF07238 PilZ domain AC884_RS04560 PF07317 Flagellar regulator YcgR AC884_RS04580 PF01966 HD domain AC884_RS04590 PF00364 Biotin-requiring enzyme AC884_RS04595 PF02436 Conserved carboxylase domain AC884_RS04595 PF00364 Biotin-requiring enzyme AC884_RS04595 PF00682 HMGL-like AC884_RS04615 PF00392 Bacterial regulatory proteins, gntR family AC884_RS04615 PF07702 UTRA domain AC884_RS04620 PF00289 Biotin carboxylase, N-terminal domain AC884_RS04620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC884_RS04620 PF02785 Biotin carboxylase C-terminal domain AC884_RS04625 PF01039 Carboxyl transferase domain AC884_RS04670 PF00005 ABC transporter AC884_RS04670 PF00664 ABC transporter transmembrane region AC884_RS04675 PF00248 Aldo/keto reductase family AC884_RS04680 PF00248 Aldo/keto reductase family AC884_RS04695 PF00149 Calcineurin-like phosphoesterase AC884_RS04700 PF00912 Transglycosylase AC884_RS04700 PF17092 Penicillin-binding protein OB-like domain AC884_RS04700 PF00905 Penicillin binding protein transpeptidase domain AC884_RS04705 PF00326 Prolyl oligopeptidase family AC884_RS04720 PF00817 impB/mucB/samB family AC884_RS04720 PF11799 impB/mucB/samB family C-terminal domain AC884_RS04720 PF11798 IMS family HHH motif AC884_RS04730 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS04735 PF03466 LysR substrate binding domain AC884_RS04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS04760 PF07690 Major Facilitator Superfamily AC884_RS04765 PF13419 Haloacid dehalogenase-like hydrolase AC884_RS04775 PF00691 OmpA family AC884_RS04780 PF03989 DNA gyrase C-terminal domain, beta-propeller AC884_RS04780 PF00521 DNA gyrase/topoisomerase IV, subunit A AC884_RS04785 PF00266 Aminotransferase class-V AC884_RS04790 PF00800 Prephenate dehydratase AC884_RS04790 PF01817 Chorismate mutase type II AC884_RS04790 PF01842 ACT domain AC884_RS04795 PF02153 Prephenate dehydrogenase AC884_RS04800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC884_RS04805 PF02224 Cytidylate kinase AC884_RS04810 PF00575 S1 RNA binding domain AC884_RS04815 PF00216 Bacterial DNA-binding protein AC884_RS04825 PF18073 Rubredoxin metal binding domain AC884_RS04830 PF00294 pfkB family carbohydrate kinase AC884_RS04835 PF01370 NAD dependent epimerase/dehydratase family AC884_RS04840 PF10531 SLBB domain AC884_RS04850 PF00291 Pyridoxal-phosphate dependent enzyme AC884_RS04855 PF13406 Transglycosylase SLT domain AC884_RS04860 PF00850 Histone deacetylase domain AC884_RS04865 PF01012 Electron transfer flavoprotein domain AC884_RS04870 PF01012 Electron transfer flavoprotein domain AC884_RS04870 PF00766 Electron transfer flavoprotein FAD-binding domain AC884_RS04875 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS04875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS04875 PF12806 Acetyl-CoA dehydrogenase C-terminal like AC884_RS04875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS04880 PF00578 AhpC/TSA family AC884_RS04880 PF10417 C-terminal domain of 1-Cys peroxiredoxin AC884_RS04895 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS04900 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS04905 PF00005 ABC transporter AC884_RS04905 PF12857 TOBE-like domain AC884_RS04905 PF17850 CysA C-terminal regulatory domain AC884_RS04910 PF01507 Phosphoadenosine phosphosulfate reductase family AC884_RS04920 PF04055 Radical SAM superfamily AC884_RS04935 PF01245 Ribosomal protein L19 AC884_RS04940 PF00293 NUDIX domain AC884_RS04950 PF00248 Aldo/keto reductase family AC884_RS04960 PF07690 Major Facilitator Superfamily AC884_RS04965 PF04345 Chorismate lyase AC884_RS04970 PF01479 S4 domain AC884_RS04970 PF00849 RNA pseudouridylate synthase AC884_RS04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS04975 PF03466 LysR substrate binding domain AC884_RS04980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC884_RS04980 PF00529 HlyD membrane-fusion protein of T1SS AC884_RS04985 PF00873 AcrB/AcrD/AcrF family AC884_RS04990 PF02321 Outer membrane efflux protein AC884_RS05000 PF02630 SCO1/SenC AC884_RS05005 PF01432 Peptidase family M3 AC884_RS05010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AC884_RS05010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AC884_RS05015 PF00072 Response regulator receiver domain AC884_RS05015 PF00196 Bacterial regulatory proteins, luxR family AC884_RS05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS05020 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS05020 PF00989 PAS fold AC884_RS05025 PF00456 Transketolase, thiamine diphosphate binding domain AC884_RS05025 PF17831 Pyruvate dehydrogenase E1 component middle domain AC884_RS05030 PF02817 e3 binding domain AC884_RS05030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC884_RS05030 PF00364 Biotin-requiring enzyme AC884_RS05035 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS05035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC884_RS05040 PF00700 Bacterial flagellin C-terminal helical region AC884_RS05040 PF00669 Bacterial flagellin N-terminal helical region AC884_RS05050 PF04452 RNA methyltransferase AC884_RS05055 PF02780 Transketolase, C-terminal domain AC884_RS05055 PF00456 Transketolase, thiamine diphosphate binding domain AC884_RS05055 PF02779 Transketolase, pyrimidine binding domain AC884_RS05060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AC884_RS05060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AC884_RS05065 PF00162 Phosphoglycerate kinase AC884_RS05075 PF00871 Acetokinase family AC884_RS05080 PF01515 Phosphate acetyl/butaryl transferase AC884_RS05085 PF11339 Protein of unknown function (DUF3141) AC884_RS05090 PF14834 Glutathione S-transferase, C-terminal domain AC884_RS05090 PF02798 Glutathione S-transferase, N-terminal domain AC884_RS05115 PF00226 DnaJ domain AC884_RS05115 PF01556 DnaJ C terminal domain AC884_RS05125 PF03591 AzlC protein AC884_RS05135 PF00994 Probable molybdopterin binding domain AC884_RS05145 PF01551 Peptidase family M23 AC884_RS05145 PF08525 Opacity-associated protein A N-terminal motif AC884_RS05145 PF01476 LysM domain AC884_RS05155 PF01176 Translation initiation factor 1A / IF-1 AC884_RS05165 PF04542 Sigma-70 region 2 AC884_RS05165 PF04539 Sigma-70 region 3 AC884_RS05165 PF04545 Sigma-70, region 4 AC884_RS05170 PF05247 Flagellar transcriptional activator (FlhD) AC884_RS05175 PF05280 Flagellar transcriptional activator (FlhC) AC884_RS05180 PF01618 MotA/TolQ/ExbB proton channel family AC884_RS05185 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC884_RS05185 PF00691 OmpA family AC884_RS05190 PF00072 Response regulator receiver domain AC884_RS05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS05195 PF02895 Signal transducing histidine kinase, homodimeric domain AC884_RS05195 PF09078 CheY binding AC884_RS05195 PF01627 Hpt domain AC884_RS05195 PF01584 CheW-like domain AC884_RS05200 PF01584 CheW-like domain AC884_RS05205 PF02203 Tar ligand binding domain homologue AC884_RS05205 PF00672 HAMP domain AC884_RS05205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC884_RS05215 PF01339 CheB methylesterase AC884_RS05215 PF00072 Response regulator receiver domain AC884_RS05220 PF00072 Response regulator receiver domain AC884_RS05225 PF04344 Chemotaxis phosphatase, CheZ AC884_RS05250 PF00248 Aldo/keto reductase family AC884_RS05255 PF00795 Carbon-nitrogen hydrolase AC884_RS05260 PF00571 CBS domain AC884_RS05260 PF03471 Transporter associated domain AC884_RS05265 PF02130 Uncharacterized protein family UPF0054 AC884_RS05270 PF02562 PhoH-like protein AC884_RS05275 PF00919 Uncharacterized protein family UPF0004 AC884_RS05275 PF01938 TRAM domain AC884_RS05275 PF04055 Radical SAM superfamily AC884_RS05290 PF07549 SecD/SecF GG Motif AC884_RS05290 PF02355 Protein export membrane protein AC884_RS05295 PF13721 SecD export protein N-terminal TM region AC884_RS05295 PF07549 SecD/SecF GG Motif AC884_RS05295 PF02355 Protein export membrane protein AC884_RS05300 PF02699 Preprotein translocase subunit AC884_RS05305 PF01702 Queuine tRNA-ribosyltransferase AC884_RS05310 PF02547 Queuosine biosynthesis protein AC884_RS05315 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AC884_RS05330 PF03797 Autotransporter beta-domain AC884_RS05330 PF03212 Pertactin AC884_RS05345 PF03212 Pertactin AC884_RS05345 PF03797 Autotransporter beta-domain AC884_RS05350 PF10414 Sirohaem synthase dimerisation region AC884_RS05350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC884_RS05350 PF14824 Sirohaem biosynthesis protein central AC884_RS05375 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AC884_RS05380 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AC884_RS05380 PF01464 Transglycosylase SLT domain AC884_RS05385 PF00155 Aminotransferase class I and II AC884_RS05395 PF01515 Phosphate acetyl/butaryl transferase AC884_RS05395 PF00390 Malic enzyme, N-terminal domain AC884_RS05395 PF03949 Malic enzyme, NAD binding domain AC884_RS05405 PF01337 Barstar (barnase inhibitor) AC884_RS05420 PF00005 ABC transporter AC884_RS05425 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS05435 PF12849 PBP superfamily domain AC884_RS05440 PF13090 Polyphosphate kinase C-terminal domain 2 AC884_RS05440 PF02503 Polyphosphate kinase middle domain AC884_RS05440 PF17941 Polyphosphate kinase C-terminal domain 1 AC884_RS05440 PF13089 Polyphosphate kinase N-terminal domain AC884_RS05445 PF02541 Ppx/GppA phosphatase family AC884_RS05455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC884_RS05455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC884_RS05455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC884_RS05455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC884_RS05460 PF00809 Pterin binding enzyme AC884_RS05465 PF17862 AAA+ lid domain AC884_RS05465 PF06480 FtsH Extracellular AC884_RS05465 PF01434 Peptidase family M41 AC884_RS05465 PF00004 ATPase family associated with various cellular activities (AAA) AC884_RS05470 PF01728 FtsJ-like methyltransferase AC884_RS05475 PF01985 CRS1 / YhbY (CRM) domain AC884_RS05500 PF01636 Phosphotransferase enzyme family AC884_RS05505 PF01207 Dihydrouridine synthase (Dus) AC884_RS05520 PF03631 Virulence factor BrkB AC884_RS05530 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AC884_RS05535 PF00486 Transcriptional regulatory protein, C terminal AC884_RS05535 PF00072 Response regulator receiver domain AC884_RS05540 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS05540 PF07689 KaiB domain AC884_RS05540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS05550 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS05550 PF00005 ABC transporter AC884_RS05560 PF11862 Domain of unknown function (DUF3382) AC884_RS05560 PF02653 Branched-chain amino acid transport system / permease component AC884_RS05570 PF00005 ABC transporter AC884_RS05575 PF00501 AMP-binding enzyme AC884_RS05580 PF17932 Tetracyclin repressor-like, C-terminal domain AC884_RS05580 PF00440 Bacterial regulatory proteins, tetR family AC884_RS05590 PF01336 OB-fold nucleic acid binding domain AC884_RS05590 PF00152 tRNA synthetases class II (D, K and N) AC884_RS05595 PF00106 short chain dehydrogenase AC884_RS05605 PF17768 RecJ OB domain AC884_RS05605 PF01368 DHH family AC884_RS05605 PF02272 DHHA1 domain AC884_RS05615 PF02687 FtsX-like permease family AC884_RS05615 PF12704 MacB-like periplasmic core domain AC884_RS05620 PF00005 ABC transporter AC884_RS05625 PF01026 TatD related DNase AC884_RS05655 PF00753 Metallo-beta-lactamase superfamily AC884_RS05655 PF03772 Competence protein AC884_RS05655 PF13567 Domain of unknown function (DUF4131) AC884_RS05665 PF02811 PHP domain AC884_RS05670 PF03449 Transcription elongation factor, N-terminal AC884_RS05670 PF01272 Transcription elongation factor, GreA/GreB, C-term AC884_RS05680 PF16970 Type-1 fimbrial protein, A AC884_RS05685 PF00390 Malic enzyme, N-terminal domain AC884_RS05685 PF01515 Phosphate acetyl/butaryl transferase AC884_RS05685 PF03949 Malic enzyme, NAD binding domain AC884_RS05690 PF00456 Transketolase, thiamine diphosphate binding domain AC884_RS05690 PF17831 Pyruvate dehydrogenase E1 component middle domain AC884_RS05695 PF01037 Lrp/AsnC ligand binding domain AC884_RS05705 PF16078 2-oxoglutarate dehydrogenase N-terminus AC884_RS05705 PF16870 2-oxoglutarate dehydrogenase C-terminal AC884_RS05705 PF02779 Transketolase, pyrimidine binding domain AC884_RS05705 PF00676 Dehydrogenase E1 component AC884_RS05710 PF00364 Biotin-requiring enzyme AC884_RS05710 PF02817 e3 binding domain AC884_RS05710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC884_RS05715 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS05715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC884_RS05720 PF03969 AFG1-like ATPase AC884_RS05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS05730 PF03466 LysR substrate binding domain AC884_RS05740 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS05765 PF00579 tRNA synthetases class I (W and Y) AC884_RS05770 PF16921 Tex protein YqgF-like domain AC884_RS05770 PF09371 Tex-like protein N-terminal domain AC884_RS05770 PF00575 S1 RNA binding domain AC884_RS05770 PF17674 HHH domain AC884_RS05775 PF04851 Type III restriction enzyme, res subunit AC884_RS05775 PF13307 Helicase C-terminal domain AC884_RS05780 PF13525 Outer membrane lipoprotein AC884_RS05785 PF01479 S4 domain AC884_RS05785 PF00849 RNA pseudouridylate synthase AC884_RS05790 PF02578 Multi-copper polyphenol oxidoreductase laccase AC884_RS05795 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AC884_RS05800 PF00106 short chain dehydrogenase AC884_RS05805 PF07879 PHB/PHA accumulation regulator DNA-binding domain AC884_RS05805 PF05233 PHB accumulation regulatory domain AC884_RS05810 PF10634 Fe2+ transport protein AC884_RS05820 PF03239 Iron permease FTR1 family AC884_RS05830 PF02567 Phenazine biosynthesis-like protein AC884_RS05850 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS05855 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC884_RS05855 PF13378 Enolase C-terminal domain-like AC884_RS05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS05860 PF03466 LysR substrate binding domain AC884_RS05870 PF07690 Major Facilitator Superfamily AC884_RS05885 PF02016 LD-carboxypeptidase N-terminal domain AC884_RS05885 PF17676 LD-carboxypeptidase C-terminal domain AC884_RS05895 PF03466 LysR substrate binding domain AC884_RS05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS05900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC884_RS05900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC884_RS05905 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS05930 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AC884_RS05955 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS05960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS05960 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC884_RS05965 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC884_RS05970 PF02769 AIR synthase related protein, C-terminal domain AC884_RS05970 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AC884_RS05970 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AC884_RS05975 PF13018 Extended Signal Peptide of Type V secretion system AC884_RS05975 PF13332 Hemagglutinin repeat AC884_RS05975 PF05860 haemagglutination activity domain AC884_RS05975 PF05594 Haemagluttinin repeat AC884_RS06000 PF00596 Class II Aldolase and Adducin N-terminal domain AC884_RS06005 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS06010 PF01242 6-pyruvoyl tetrahydropterin synthase AC884_RS06020 PF00472 RF-1 domain AC884_RS06040 PF00701 Dihydrodipicolinate synthetase family AC884_RS06045 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS06070 PF00890 FAD binding domain AC884_RS06070 PF14537 Cytochrome c3 AC884_RS06075 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS06090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AC884_RS06090 PF01266 FAD dependent oxidoreductase AC884_RS06095 PF08220 DeoR-like helix-turn-helix domain AC884_RS06095 PF00455 DeoR C terminal sensor domain AC884_RS06100 PF17912 MalK OB fold domain AC884_RS06100 PF00005 ABC transporter AC884_RS06105 PF17912 MalK OB fold domain AC884_RS06105 PF00005 ABC transporter AC884_RS06115 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS06140 PF01037 Lrp/AsnC ligand binding domain AC884_RS06145 PF01266 FAD dependent oxidoreductase AC884_RS06150 PF00149 Calcineurin-like phosphoesterase AC884_RS06150 PF12320 Type 5 capsule protein repressor C-terminal domain AC884_RS06190 PF00478 IMP dehydrogenase / GMP reductase domain AC884_RS06190 PF00571 CBS domain AC884_RS06195 PF00117 Glutamine amidotransferase class-I AC884_RS06195 PF02540 NAD synthase AC884_RS06195 PF00958 GMP synthase C terminal domain AC884_RS06210 PF13657 HipA N-terminal domain AC884_RS06210 PF07804 HipA-like C-terminal domain AC884_RS06220 PF07690 Major Facilitator Superfamily AC884_RS06235 PF01979 Amidohydrolase family AC884_RS06245 PF00005 ABC transporter AC884_RS06250 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS06275 PF01965 DJ-1/PfpI family AC884_RS06285 PF01740 STAS domain AC884_RS06285 PF00916 Sulfate permease family AC884_RS06290 PF10996 Beta-Casp domain AC884_RS06290 PF00753 Metallo-beta-lactamase superfamily AC884_RS06290 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AC884_RS06310 PF12706 Beta-lactamase superfamily domain AC884_RS06315 PF12833 Helix-turn-helix domain AC884_RS06315 PF01965 DJ-1/PfpI family AC884_RS06320 PF03466 LysR substrate binding domain AC884_RS06320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS06335 PF00107 Zinc-binding dehydrogenase AC884_RS06335 PF08240 Alcohol dehydrogenase GroES-like domain AC884_RS06340 PF07690 Major Facilitator Superfamily AC884_RS06345 PF00392 Bacterial regulatory proteins, gntR family AC884_RS06345 PF00155 Aminotransferase class I and II AC884_RS06355 PF01810 LysE type translocator AC884_RS06365 PF07687 Peptidase dimerisation domain AC884_RS06365 PF01546 Peptidase family M20/M25/M40 AC884_RS06370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS06375 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS06380 PF12911 N-terminal TM domain of oligopeptide transport permease C AC884_RS06380 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS06385 PF00005 ABC transporter AC884_RS06385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS06390 PF00356 Bacterial regulatory proteins, lacI family AC884_RS06425 PF09335 SNARE associated Golgi protein AC884_RS06440 PF13847 Methyltransferase domain AC884_RS06455 PF00155 Aminotransferase class I and II AC884_RS06455 PF00392 Bacterial regulatory proteins, gntR family AC884_RS06465 PF00692 dUTPase AC884_RS06480 PF01632 Ribosomal protein L35 AC884_RS06485 PF00453 Ribosomal protein L20 AC884_RS06490 PF01409 tRNA synthetases class II core domain (F) AC884_RS06490 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AC884_RS06495 PF03483 B3/4 domain AC884_RS06495 PF03484 tRNA synthetase B5 domain AC884_RS06495 PF01588 Putative tRNA binding domain AC884_RS06495 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AC884_RS06495 PF03147 Ferredoxin-fold anticodon binding domain AC884_RS06500 PF00216 Bacterial DNA-binding protein AC884_RS06550 PF04231 Endonuclease I AC884_RS06570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC884_RS06570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC884_RS06575 PF04381 Putative exonuclease, RdgC AC884_RS06585 PF02515 CoA-transferase family III AC884_RS06590 PF03466 LysR substrate binding domain AC884_RS06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS06610 PF00106 short chain dehydrogenase AC884_RS06620 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS06625 PF08402 TOBE domain AC884_RS06625 PF00005 ABC transporter AC884_RS06630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC884_RS06630 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS06630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC884_RS06635 PF00083 Sugar (and other) transporter AC884_RS06635 PF08946 Osmosensory transporter coiled coil AC884_RS06640 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS06645 PF00072 Response regulator receiver domain AC884_RS06645 PF00486 Transcriptional regulatory protein, C terminal AC884_RS06650 PF00154 recA bacterial DNA recombination protein AC884_RS06655 PF02631 RecX family AC884_RS06660 PF03466 LysR substrate binding domain AC884_RS06660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS06665 PF08267 Cobalamin-independent synthase, N-terminal domain AC884_RS06665 PF01717 Cobalamin-independent synthase, Catalytic domain AC884_RS06675 PF08442 ATP-grasp domain AC884_RS06675 PF00549 CoA-ligase AC884_RS06680 PF02629 CoA binding domain AC884_RS06680 PF00549 CoA-ligase AC884_RS06685 PF03741 Integral membrane protein TerC family AC884_RS06690 PF03741 Integral membrane protein TerC family AC884_RS06695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AC884_RS06695 PF03900 Porphobilinogen deaminase, C-terminal domain AC884_RS06715 PF00719 Inorganic pyrophosphatase AC884_RS06720 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC884_RS06755 PF00263 Bacterial type II and III secretion system protein AC884_RS06755 PF13629 Pilus formation protein N terminal region AC884_RS06755 PF04972 BON domain AC884_RS06760 PF00437 Type II/IV secretion system protein AC884_RS06780 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS06785 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AC884_RS06785 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AC884_RS06790 PF02615 Malate/L-lactate dehydrogenase AC884_RS06795 PF03466 LysR substrate binding domain AC884_RS06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS06805 PF01266 FAD dependent oxidoreductase AC884_RS06810 PF04267 Sarcosine oxidase, delta subunit family AC884_RS06815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS06815 PF08669 Glycine cleavage T-protein C-terminal barrel domain AC884_RS06815 PF01571 Aminomethyltransferase folate-binding domain AC884_RS06815 PF17806 Sarcosine oxidase A3 domain AC884_RS06825 PF00551 Formyl transferase AC884_RS06830 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS06840 PF00561 alpha/beta hydrolase fold AC884_RS06850 PF01565 FAD binding domain AC884_RS06850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AC884_RS06855 PF05173 Dihydrodipicolinate reductase, C-terminus AC884_RS06855 PF01113 Dihydrodipicolinate reductase, N-terminus AC884_RS06860 PF04355 SmpA / OmlA family AC884_RS06865 PF01475 Ferric uptake regulator family AC884_RS06870 PF02463 RecF/RecN/SMC N terminal domain AC884_RS06875 PF01513 ATP-NAD kinase AC884_RS06880 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AC884_RS06880 PF01628 HrcA protein C terminal domain AC884_RS06885 PF00762 Ferrochelatase AC884_RS06895 PF01025 GrpE AC884_RS06905 PF00012 Hsp70 protein AC884_RS06910 PF01556 DnaJ C terminal domain AC884_RS06910 PF00226 DnaJ domain AC884_RS06910 PF00684 DnaJ central domain AC884_RS06915 PF05193 Peptidase M16 inactive domain AC884_RS06915 PF00675 Insulinase (Peptidase family M16) AC884_RS06935 PF00004 ATPase family associated with various cellular activities (AAA) AC884_RS06935 PF17862 AAA+ lid domain AC884_RS06935 PF01434 Peptidase family M41 AC884_RS06945 PF00034 Cytochrome c AC884_RS06960 PF00180 Isocitrate/isopropylmalate dehydrogenase AC884_RS06980 PF00072 Response regulator receiver domain AC884_RS06980 PF00486 Transcriptional regulatory protein, C terminal AC884_RS06990 PF02669 K+-transporting ATPase, c chain AC884_RS07000 PF03814 Potassium-transporting ATPase A subunit AC884_RS07015 PF00474 Sodium:solute symporter family AC884_RS07030 PF00893 Small Multidrug Resistance protein AC884_RS07035 PF01713 Smr domain AC884_RS07035 PF00488 MutS domain V AC884_RS07040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS07045 PF17854 FtsK alpha domain AC884_RS07045 PF09397 Ftsk gamma domain AC884_RS07045 PF01580 FtsK/SpoIIIE family AC884_RS07045 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AC884_RS07050 PF03548 Outer membrane lipoprotein carrier protein LolA AC884_RS07055 PF16193 AAA C-terminal domain AC884_RS07055 PF00004 ATPase family associated with various cellular activities (AAA) AC884_RS07055 PF12002 MgsA AAA+ ATPase C terminal AC884_RS07060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC884_RS07060 PF02403 Seryl-tRNA synthetase N-terminal domain AC884_RS07085 PF17151 Periplasmic sensor domain AC884_RS07085 PF00990 Diguanylate cyclase, GGDEF domain AC884_RS07100 PF00593 TonB dependent receptor AC884_RS07100 PF07660 Secretin and TonB N terminus short domain AC884_RS07100 PF07715 TonB-dependent Receptor Plug Domain AC884_RS07105 PF07690 Major Facilitator Superfamily AC884_RS07125 PF06276 Ferric iron reductase FhuF-like transporter AC884_RS07125 PF04183 IucA / IucC family AC884_RS07135 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AC884_RS07145 PF00999 Sodium/hydrogen exchanger family AC884_RS07145 PF02254 TrkA-N domain AC884_RS07150 PF00106 short chain dehydrogenase AC884_RS07160 PF03883 Peroxide stress protein YaaA AC884_RS07180 PF00990 Diguanylate cyclase, GGDEF domain AC884_RS07190 PF04055 Radical SAM superfamily AC884_RS07190 PF06969 HemN C-terminal domain AC884_RS07200 PF00196 Bacterial regulatory proteins, luxR family AC884_RS07205 PF03129 Anticodon binding domain AC884_RS07205 PF02824 TGS domain AC884_RS07205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC884_RS07205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC884_RS07210 PF05198 Translation initiation factor IF-3, N-terminal domain AC884_RS07210 PF00707 Translation initiation factor IF-3, C-terminal domain AC884_RS07215 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AC884_RS07215 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AC884_RS07225 PF00381 PTS HPr component phosphorylation site AC884_RS07230 PF02896 PEP-utilising enzyme, TIM barrel domain AC884_RS07230 PF05524 PEP-utilising enzyme, N-terminal AC884_RS07230 PF00391 PEP-utilising enzyme, mobile domain AC884_RS07240 PF02566 OsmC-like protein AC884_RS07245 PF02423 Ornithine cyclodeaminase/mu-crystallin family AC884_RS07255 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS07260 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS07265 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS07270 PF00005 ABC transporter AC884_RS07285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC884_RS07285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC884_RS07295 PF02293 AmiS/UreI family transporter AC884_RS07300 PF03069 Acetamidase/Formamidase family AC884_RS07315 PF01116 Fructose-bisphosphate aldolase class-II AC884_RS07325 PF01259 SAICAR synthetase AC884_RS07330 PF15723 Motility quorum-sensing regulator, toxin of MqsA AC884_RS07335 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AC884_RS07345 PF02600 Disulfide bond formation protein DsbB AC884_RS07350 PF00731 AIR carboxylase AC884_RS07355 PF02222 ATP-grasp domain AC884_RS07355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AC884_RS07360 PF03481 Putative GTP-binding controlling metal-binding AC884_RS07360 PF01300 Telomere recombination AC884_RS07365 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS07370 PF09339 IclR helix-turn-helix domain AC884_RS07370 PF01614 Bacterial transcriptional regulator AC884_RS07375 PF00491 Arginase family AC884_RS07380 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS07385 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS07390 PF00005 ABC transporter AC884_RS07395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS07395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS07405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS07405 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS07405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS07410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS07410 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS07410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS07415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS07415 PF03466 LysR substrate binding domain AC884_RS07420 PF00589 Phage integrase family AC884_RS07420 PF02899 Phage integrase, N-terminal SAM-like domain AC884_RS07425 PF04073 Aminoacyl-tRNA editing domain AC884_RS07430 PF01174 SNO glutamine amidotransferase family AC884_RS07445 PF00768 D-alanyl-D-alanine carboxypeptidase AC884_RS07455 PF07690 Major Facilitator Superfamily AC884_RS07465 PF13361 UvrD-like helicase C-terminal domain AC884_RS07465 PF12705 PD-(D/E)XK nuclease superfamily AC884_RS07465 PF00580 UvrD/REP helicase N-terminal domain AC884_RS07480 PF12169 DNA polymerase III subunits gamma and tau domain III AC884_RS07480 PF12170 DNA polymerase III tau subunit V interacting with alpha AC884_RS07480 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AC884_RS07485 PF02575 YbaB/EbfC DNA-binding family AC884_RS07490 PF02132 RecR protein AC884_RS07490 PF13662 Toprim domain AC884_RS07510 PF04228 Putative neutral zinc metallopeptidase AC884_RS07515 PF01300 Telomere recombination AC884_RS07555 PF03358 NADPH-dependent FMN reductase AC884_RS07560 PF07311 Dodecin AC884_RS07565 PF05192 MutS domain III AC884_RS07565 PF00488 MutS domain V AC884_RS07565 PF05188 MutS domain II AC884_RS07565 PF01624 MutS domain I AC884_RS07565 PF05190 MutS family domain IV AC884_RS07570 PF08007 Cupin superfamily protein AC884_RS07575 PF16970 Type-1 fimbrial protein, A AC884_RS07580 PF06804 NlpB/DapX lipoprotein AC884_RS07585 PF00701 Dihydrodipicolinate synthetase family AC884_RS07590 PF02163 Peptidase family M50 AC884_RS07590 PF17820 PDZ domain AC884_RS07605 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS07610 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS07615 PF00005 ABC transporter AC884_RS07620 PF02824 TGS domain AC884_RS07620 PF04607 Region found in RelA / SpoT proteins AC884_RS07620 PF13291 ACT domain AC884_RS07625 PF01192 RNA polymerase Rpb6 AC884_RS07630 PF00625 Guanylate kinase AC884_RS07635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC884_RS07640 PF00034 Cytochrome c AC884_RS07650 PF00877 NlpC/P60 family AC884_RS07655 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AC884_RS07655 PF01048 Phosphorylase superfamily AC884_RS07675 PF03755 YicC-like family, N-terminal region AC884_RS07675 PF08340 Domain of unknown function (DUF1732) AC884_RS07680 PF03725 3' exoribonuclease family, domain 2 AC884_RS07680 PF01138 3' exoribonuclease family, domain 1 AC884_RS07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS07690 PF03466 LysR substrate binding domain AC884_RS07695 PF00672 HAMP domain AC884_RS07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC884_RS07695 PF02203 Tar ligand binding domain homologue AC884_RS07700 PF00990 Diguanylate cyclase, GGDEF domain AC884_RS07700 PF17154 Gammaproteobacterial periplasmic sensor domain AC884_RS07700 PF00563 EAL domain AC884_RS07700 PF00672 HAMP domain AC884_RS07705 PF01725 Ham1 family AC884_RS07715 PF06969 HemN C-terminal domain AC884_RS07715 PF04055 Radical SAM superfamily AC884_RS07720 PF03951 Glutamine synthetase, beta-Grasp domain AC884_RS07720 PF00120 Glutamine synthetase, catalytic domain AC884_RS07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS07725 PF00989 PAS fold AC884_RS07725 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS07730 PF00072 Response regulator receiver domain AC884_RS07730 PF02954 Bacterial regulatory protein, Fis family AC884_RS07730 PF00158 Sigma-54 interaction domain AC884_RS07735 PF03466 LysR substrate binding domain AC884_RS07735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS07740 PF17954 Quercetinase C-terminal cupin domain AC884_RS07740 PF02678 Pirin AC884_RS07745 PF05726 Pirin C-terminal cupin domain AC884_RS07745 PF02678 Pirin AC884_RS07755 PF00005 ABC transporter AC884_RS07755 PF08402 TOBE domain AC884_RS07760 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS07770 PF00175 Oxidoreductase NAD-binding domain AC884_RS07770 PF00970 Oxidoreductase FAD-binding domain AC884_RS07775 PF03466 LysR substrate binding domain AC884_RS07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS07785 PF00248 Aldo/keto reductase family AC884_RS07795 PF01042 Endoribonuclease L-PSP AC884_RS07800 PF00270 DEAD/DEAH box helicase AC884_RS07800 PF00271 Helicase conserved C-terminal domain AC884_RS07800 PF17191 RecG wedge domain AC884_RS07805 PF03466 LysR substrate binding domain AC884_RS07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS07810 PF03466 LysR substrate binding domain AC884_RS07815 PF00171 Aldehyde dehydrogenase family AC884_RS07820 PF00210 Ferritin-like domain AC884_RS07840 PF00535 Glycosyl transferase family 2 AC884_RS07850 PF00005 ABC transporter AC884_RS07860 PF00534 Glycosyl transferases group 1 AC884_RS07870 PF02563 Polysaccharide biosynthesis/export protein AC884_RS07875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC884_RS07875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC884_RS07875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC884_RS07880 PF01370 NAD dependent epimerase/dehydratase family AC884_RS07885 PF05159 Capsule polysaccharide biosynthesis protein AC884_RS07890 PF05159 Capsule polysaccharide biosynthesis protein AC884_RS07900 PF00106 short chain dehydrogenase AC884_RS07915 PF14759 Reductase C-terminal AC884_RS07915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS07925 PF00005 ABC transporter AC884_RS07930 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS07930 PF00005 ABC transporter AC884_RS07935 PF11862 Domain of unknown function (DUF3382) AC884_RS07935 PF02653 Branched-chain amino acid transport system / permease component AC884_RS07945 PF03741 Integral membrane protein TerC family AC884_RS07955 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS07970 PF17863 AAA lid domain AC884_RS07970 PF07726 ATPase family associated with various cellular activities (AAA) AC884_RS08005 PF00884 Sulfatase AC884_RS08030 PF00196 Bacterial regulatory proteins, luxR family AC884_RS08030 PF00072 Response regulator receiver domain AC884_RS08035 PF12951 Passenger-associated-transport-repeat AC884_RS08035 PF03797 Autotransporter beta-domain AC884_RS08035 PF00082 Subtilase family AC884_RS08040 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AC884_RS08045 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AC884_RS08050 PF00043 Glutathione S-transferase, C-terminal domain AC884_RS08050 PF02798 Glutathione S-transferase, N-terminal domain AC884_RS08055 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AC884_RS08060 PF03466 LysR substrate binding domain AC884_RS08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS08065 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS08075 PF01070 FMN-dependent dehydrogenase AC884_RS08080 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC884_RS08095 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS08100 PF03466 LysR substrate binding domain AC884_RS08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS08105 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS08130 PF03358 NADPH-dependent FMN reductase AC884_RS08150 PF07969 Amidohydrolase family AC884_RS08155 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS08165 PF03466 LysR substrate binding domain AC884_RS08180 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS08185 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC884_RS08185 PF00361 Proton-conducting membrane transporter AC884_RS08185 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AC884_RS08185 PF13244 Domain of unknown function (DUF4040) AC884_RS08190 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC884_RS08195 PF00361 Proton-conducting membrane transporter AC884_RS08200 PF01899 Na+/H+ ion antiporter subunit AC884_RS08205 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AC884_RS08230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AC884_RS08235 PF17676 LD-carboxypeptidase C-terminal domain AC884_RS08235 PF02016 LD-carboxypeptidase N-terminal domain AC884_RS08240 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS08245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS08255 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS08260 PF00005 ABC transporter AC884_RS08260 PF12848 ABC transporter AC884_RS08265 PF00005 ABC transporter AC884_RS08295 PF00175 Oxidoreductase NAD-binding domain AC884_RS08295 PF00970 Oxidoreductase FAD-binding domain AC884_RS08295 PF00042 Globin AC884_RS08300 PF02082 Transcriptional regulator AC884_RS08305 PF01266 FAD dependent oxidoreductase AC884_RS08320 PF01571 Aminomethyltransferase folate-binding domain AC884_RS08325 PF02618 YceG-like family AC884_RS08330 PF02223 Thymidylate kinase AC884_RS08335 PF12169 DNA polymerase III subunits gamma and tau domain III AC884_RS08340 PF01026 TatD related DNase AC884_RS08355 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS08365 PF00005 ABC transporter AC884_RS08370 PF00491 Arginase family AC884_RS08375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AC884_RS08375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC884_RS08380 PF00171 Aldehyde dehydrogenase family AC884_RS08385 PF07687 Peptidase dimerisation domain AC884_RS08385 PF01546 Peptidase family M20/M25/M40 AC884_RS08390 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS08390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS08390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS08400 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC884_RS08400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS08410 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC884_RS08410 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS08415 PF00392 Bacterial regulatory proteins, gntR family AC884_RS08415 PF07729 FCD domain AC884_RS08425 PF04343 Protein of unknown function, DUF488 AC884_RS08430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC884_RS08450 PF01425 Amidase AC884_RS08455 PF07286 Protein of unknown function (DUF1445) AC884_RS08465 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS08465 PF00072 Response regulator receiver domain AC884_RS08465 PF00989 PAS fold AC884_RS08465 PF01627 Hpt domain AC884_RS08465 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS08470 PF00196 Bacterial regulatory proteins, luxR family AC884_RS08470 PF00072 Response regulator receiver domain AC884_RS08475 PF13332 Hemagglutinin repeat AC884_RS08475 PF13018 Extended Signal Peptide of Type V secretion system AC884_RS08475 PF05594 Haemagluttinin repeat AC884_RS08475 PF05860 haemagglutination activity domain AC884_RS08480 PF16970 Type-1 fimbrial protein, A AC884_RS08485 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AC884_RS08485 PF02753 Pili assembly chaperone PapD, C-terminal domain AC884_RS08490 PF13954 PapC N-terminal domain AC884_RS08490 PF13953 PapC C-terminal domain AC884_RS08490 PF00577 Outer membrane usher protein AC884_RS08495 PF00419 Fimbrial protein AC884_RS08500 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AC884_RS08500 PF17287 POTRA domain AC884_RS08500 PF08479 POTRA domain, ShlB-type AC884_RS08515 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS08540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS08540 PF03466 LysR substrate binding domain AC884_RS08550 PF05378 Hydantoinase/oxoprolinase N-terminal region AC884_RS08550 PF01968 Hydantoinase/oxoprolinase AC884_RS08565 PF05552 Conserved TM helix AC884_RS08565 PF00924 Mechanosensitive ion channel AC884_RS08575 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS08580 PF00588 SpoU rRNA Methylase family AC884_RS08585 PF00459 Inositol monophosphatase family AC884_RS08590 PF03471 Transporter associated domain AC884_RS08590 PF03741 Integral membrane protein TerC family AC884_RS08595 PF02673 Bacitracin resistance protein BacA AC884_RS08600 PF00149 Calcineurin-like phosphoesterase AC884_RS08605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC884_RS08615 PF09190 DALR domain AC884_RS08615 PF01406 tRNA synthetases class I (C) catalytic domain AC884_RS08620 PF00730 HhH-GPD superfamily base excision DNA repair protein AC884_RS08620 PF12833 Helix-turn-helix domain AC884_RS08620 PF06029 AlkA N-terminal domain AC884_RS08620 PF02805 Metal binding domain of Ada AC884_RS08625 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AC884_RS08635 PF09179 TilS substrate binding domain AC884_RS08635 PF01171 PP-loop family AC884_RS08640 PF00696 Amino acid kinase family AC884_RS08640 PF01842 ACT domain AC884_RS08640 PF13840 ACT domain AC884_RS08665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC884_RS08665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC884_RS08670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS08670 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC884_RS08675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS08680 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS08685 PF00561 alpha/beta hydrolase fold AC884_RS08690 PF01958 Domain of unknown function DUF108 AC884_RS08690 PF03447 Homoserine dehydrogenase, NAD binding domain AC884_RS08705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS08705 PF03466 LysR substrate binding domain AC884_RS08725 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS08730 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS08735 PF00005 ABC transporter AC884_RS08735 PF08402 TOBE domain AC884_RS08745 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS08745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC884_RS08750 PF09339 IclR helix-turn-helix domain AC884_RS08750 PF01614 Bacterial transcriptional regulator AC884_RS08755 PF13380 CoA binding domain AC884_RS08760 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS08765 PF01042 Endoribonuclease L-PSP AC884_RS08790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC884_RS08800 PF00535 Glycosyl transferase family 2 AC884_RS08805 PF01522 Polysaccharide deacetylase AC884_RS08805 PF14883 Hypothetical glycosyl hydrolase family 13 AC884_RS08825 PF12802 MarR family AC884_RS08840 PF03212 Pertactin AC884_RS08840 PF03797 Autotransporter beta-domain AC884_RS08845 PF01726 LexA DNA binding domain AC884_RS08845 PF00717 Peptidase S24-like AC884_RS08850 PF00155 Aminotransferase class I and II AC884_RS08855 PF17757 UvrB interaction domain AC884_RS08855 PF12344 Ultra-violet resistance protein B AC884_RS08855 PF04851 Type III restriction enzyme, res subunit AC884_RS08855 PF00271 Helicase conserved C-terminal domain AC884_RS08855 PF02151 UvrB/uvrC motif AC884_RS08860 PF01451 Low molecular weight phosphotyrosine protein phosphatase AC884_RS08865 PF02082 Transcriptional regulator AC884_RS08870 PF00266 Aminotransferase class-V AC884_RS08875 PF01592 NifU-like N terminal domain AC884_RS08880 PF01521 Iron-sulphur cluster biosynthesis AC884_RS08885 PF07743 HSCB C-terminal oligomerisation domain AC884_RS08890 PF00012 Hsp70 protein AC884_RS08895 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS08900 PF04384 Iron-sulphur cluster assembly AC884_RS08905 PF02142 MGS-like domain AC884_RS08915 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS08925 PF03812 2-keto-3-deoxygluconate permease AC884_RS08930 PF17042 Nucleotide-binding C-terminal domain AC884_RS08930 PF07005 Sugar-binding N-terminal domain AC884_RS08935 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AC884_RS08950 PF02261 Aspartate decarboxylase AC884_RS08955 PF00175 Oxidoreductase NAD-binding domain AC884_RS08955 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS08955 PF00970 Oxidoreductase FAD-binding domain AC884_RS08960 PF01266 FAD dependent oxidoreductase AC884_RS08965 PF13416 Bacterial extracellular solute-binding protein AC884_RS08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS08970 PF03466 LysR substrate binding domain AC884_RS08985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS09000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS09000 PF00005 ABC transporter AC884_RS09005 PF01425 Amidase AC884_RS09050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC884_RS09050 PF01411 tRNA synthetases class II (A) AC884_RS09050 PF02272 DHHA1 domain AC884_RS09055 PF01206 Sulfurtransferase TusA AC884_RS09065 PF00886 Ribosomal protein S16 AC884_RS09070 PF01782 RimM N-terminal domain AC884_RS09075 PF01746 tRNA (Guanine-1)-methyltransferase AC884_RS09080 PF00266 Aminotransferase class-V AC884_RS09100 PF08521 Two-component sensor kinase N-terminal AC884_RS09100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS09100 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS09105 PF00486 Transcriptional regulatory protein, C terminal AC884_RS09105 PF00072 Response regulator receiver domain AC884_RS09115 PF10458 Valyl tRNA synthetase tRNA binding arm AC884_RS09115 PF08264 Anticodon-binding domain of tRNA AC884_RS09115 PF00133 tRNA synthetases class I (I, L, M and V) AC884_RS09120 PF00334 Nucleoside diphosphate kinase AC884_RS09125 PF04055 Radical SAM superfamily AC884_RS09135 PF04551 GcpE protein AC884_RS09140 PF03129 Anticodon binding domain AC884_RS09140 PF13393 Histidyl-tRNA synthetase AC884_RS09145 PF09976 Tetratricopeptide repeat-like domain AC884_RS09150 PF13360 PQQ-like domain AC884_RS09155 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AC884_RS09155 PF01926 50S ribosome-binding GTPase AC884_RS09160 PF00155 Aminotransferase class I and II AC884_RS09165 PF17209 Hfq protein AC884_RS09170 PF13167 GTP-binding GTPase N-terminal AC884_RS09170 PF01926 50S ribosome-binding GTPase AC884_RS09170 PF16360 GTP-binding GTPase Middle Region AC884_RS09175 PF01145 SPFH domain / Band 7 family AC884_RS09175 PF12221 Bacterial membrane protein N terminal AC884_RS09180 PF01145 SPFH domain / Band 7 family AC884_RS09185 PF13393 Histidyl-tRNA synthetase AC884_RS09190 PF00709 Adenylosuccinate synthetase AC884_RS09195 PF00156 Phosphoribosyl transferase domain AC884_RS09200 PF01165 Ribosomal protein S21 AC884_RS09205 PF08278 DNA primase DnaG DnaB-binding AC884_RS09205 PF08275 DNA primase catalytic core, N-terminal domain AC884_RS09205 PF10410 DnaB-helicase binding domain of primase AC884_RS09205 PF01807 CHC2 zinc finger AC884_RS09210 PF04546 Sigma-70, non-essential region AC884_RS09210 PF03979 Sigma-70 factor, region 1.1 AC884_RS09210 PF00140 Sigma-70 factor, region 1.2 AC884_RS09210 PF04542 Sigma-70 region 2 AC884_RS09210 PF04539 Sigma-70 region 3 AC884_RS09210 PF04545 Sigma-70, region 4 AC884_RS09245 PF01594 AI-2E family transporter AC884_RS09250 PF01061 ABC-2 type transporter AC884_RS09255 PF00005 ABC transporter AC884_RS09280 PF13746 4Fe-4S dicluster domain AC884_RS09280 PF12801 4Fe-4S binding domain AC884_RS09280 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AC884_RS09285 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AC884_RS09285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC884_RS09320 PF00202 Aminotransferase class-III AC884_RS09325 PF00155 Aminotransferase class I and II AC884_RS09335 PF13649 Methyltransferase domain AC884_RS09340 PF03788 LrgA family AC884_RS09360 PF00158 Sigma-54 interaction domain AC884_RS09360 PF02954 Bacterial regulatory protein, Fis family AC884_RS09360 PF01590 GAF domain AC884_RS09365 PF00171 Aldehyde dehydrogenase family AC884_RS09380 PF04286 Protein of unknown function (DUF445) AC884_RS09385 PF03466 LysR substrate binding domain AC884_RS09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS09390 PF02567 Phenazine biosynthesis-like protein AC884_RS09395 PF07237 Protein of unknown function (DUF1428) AC884_RS09400 PF12833 Helix-turn-helix domain AC884_RS09400 PF02805 Metal binding domain of Ada AC884_RS09410 PF03625 Domain of unknown function DUF302 AC884_RS09410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AC884_RS09430 PF00916 Sulfate permease family AC884_RS09430 PF01740 STAS domain AC884_RS09445 PF02535 ZIP Zinc transporter AC884_RS09455 PF00664 ABC transporter transmembrane region AC884_RS09455 PF00005 ABC transporter AC884_RS09465 PF00583 Acetyltransferase (GNAT) family AC884_RS09480 PF07690 Major Facilitator Superfamily AC884_RS09500 PF12833 Helix-turn-helix domain AC884_RS09500 PF06719 AraC-type transcriptional regulator N-terminus AC884_RS09510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC884_RS09515 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS09515 PF01799 [2Fe-2S] binding domain AC884_RS09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS09525 PF03466 LysR substrate binding domain AC884_RS09550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC884_RS09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS09580 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS09585 PF01522 Polysaccharide deacetylase AC884_RS09595 PF01425 Amidase AC884_RS09600 PF01425 Amidase AC884_RS09635 PF01152 Bacterial-like globin AC884_RS09660 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS09680 PF02803 Thiolase, C-terminal domain AC884_RS09680 PF00108 Thiolase, N-terminal domain AC884_RS09685 PF14535 AMP-binding enzyme C-terminal domain AC884_RS09685 PF00501 AMP-binding enzyme AC884_RS09690 PF07859 alpha/beta hydrolase fold AC884_RS09695 PF02515 CoA-transferase family III AC884_RS09700 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS09710 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS09715 PF00866 Ring hydroxylating beta subunit AC884_RS09720 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AC884_RS09720 PF00355 Rieske [2Fe-2S] domain AC884_RS09725 PF13458 Periplasmic binding protein AC884_RS09730 PF02653 Branched-chain amino acid transport system / permease component AC884_RS09735 PF02653 Branched-chain amino acid transport system / permease component AC884_RS09735 PF11862 Domain of unknown function (DUF3382) AC884_RS09750 PF00463 Isocitrate lyase family AC884_RS09755 PF14489 QueF-like protein AC884_RS09755 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AC884_RS09770 PF01066 CDP-alcohol phosphatidyltransferase AC884_RS09775 PF01541 GIY-YIG catalytic domain AC884_RS09775 PF02151 UvrB/uvrC motif AC884_RS09775 PF08459 UvrC Helix-hairpin-helix N-terminal AC884_RS09780 PF00933 Glycosyl hydrolase family 3 N terminal domain AC884_RS09785 PF01648 4'-phosphopantetheinyl transferase superfamily AC884_RS09790 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AC884_RS09795 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AC884_RS09795 PF02321 Outer membrane efflux protein AC884_RS09800 PF00873 AcrB/AcrD/AcrF family AC884_RS09805 PF00529 HlyD membrane-fusion protein of T1SS AC884_RS09805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC884_RS09825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS09825 PF03459 TOBE domain AC884_RS09830 PF00005 ABC transporter AC884_RS09845 PF00080 Copper/zinc superoxide dismutase (SODC) AC884_RS09850 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS09860 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS09870 PF00392 Bacterial regulatory proteins, gntR family AC884_RS09870 PF07729 FCD domain AC884_RS09880 PF00108 Thiolase, N-terminal domain AC884_RS09880 PF02803 Thiolase, C-terminal domain AC884_RS09885 PF01361 Tautomerase enzyme AC884_RS09890 PF00571 CBS domain AC884_RS09890 PF00005 ABC transporter AC884_RS09895 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS09915 PF07690 Major Facilitator Superfamily AC884_RS09920 PF00830 Ribosomal L28 family AC884_RS09925 PF00471 Ribosomal protein L33 AC884_RS09930 PF00916 Sulfate permease family AC884_RS09930 PF01740 STAS domain AC884_RS09950 PF01047 MarR family AC884_RS09955 PF07690 Major Facilitator Superfamily AC884_RS09960 PF08264 Anticodon-binding domain of tRNA AC884_RS09960 PF13603 Leucyl-tRNA synthetase, Domain 2 AC884_RS09960 PF00133 tRNA synthetases class I (I, L, M and V) AC884_RS09960 PF09334 tRNA synthetases class I (M) AC884_RS09975 PF00171 Aldehyde dehydrogenase family AC884_RS09985 PF01425 Amidase AC884_RS09990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC884_RS09990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC884_RS10035 PF03466 LysR substrate binding domain AC884_RS10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS10045 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AC884_RS10045 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AC884_RS10050 PF03466 LysR substrate binding domain AC884_RS10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS10070 PF01925 Sulfite exporter TauE/SafE AC884_RS10075 PF00892 EamA-like transporter family AC884_RS10100 PF11791 Aconitate B N-terminal domain AC884_RS10100 PF06434 Aconitate hydratase 2 N-terminus AC884_RS10100 PF00330 Aconitase family (aconitate hydratase) AC884_RS10110 PF00691 OmpA family AC884_RS10125 PF07715 TonB-dependent Receptor Plug Domain AC884_RS10125 PF00593 TonB dependent receptor AC884_RS10135 PF00694 Aconitase C-terminal domain AC884_RS10135 PF00330 Aconitase family (aconitate hydratase) AC884_RS10140 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC884_RS10155 PF09285 Elongation factor P, C-terminal AC884_RS10155 PF08207 Elongation factor P (EF-P) KOW-like domain AC884_RS10155 PF01132 Elongation factor P (EF-P) OB domain AC884_RS10160 PF00034 Cytochrome c AC884_RS10170 PF04542 Sigma-70 region 2 AC884_RS10170 PF08281 Sigma-70, region 4 AC884_RS10185 PF00158 Sigma-54 interaction domain AC884_RS10185 PF00072 Response regulator receiver domain AC884_RS10185 PF02954 Bacterial regulatory protein, Fis family AC884_RS10215 PF00437 Type II/IV secretion system protein AC884_RS10225 PF13629 Pilus formation protein N terminal region AC884_RS10225 PF00263 Bacterial type II and III secretion system protein AC884_RS10225 PF04972 BON domain AC884_RS10255 PF00563 EAL domain AC884_RS10255 PF03707 Bacterial signalling protein N terminal repeat AC884_RS10255 PF00990 Diguanylate cyclase, GGDEF domain AC884_RS10260 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AC884_RS10260 PF08479 POTRA domain, ShlB-type AC884_RS10275 PF01047 MarR family AC884_RS10280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS10280 PF00005 ABC transporter AC884_RS10285 PF12911 N-terminal TM domain of oligopeptide transport permease C AC884_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS10290 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS10295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS10305 PF01544 CorA-like Mg2+ transporter protein AC884_RS10310 PF00580 UvrD/REP helicase N-terminal domain AC884_RS10310 PF13361 UvrD-like helicase C-terminal domain AC884_RS10320 PF00155 Aminotransferase class I and II AC884_RS10320 PF00392 Bacterial regulatory proteins, gntR family AC884_RS10325 PF00202 Aminotransferase class-III AC884_RS10330 PF00171 Aldehyde dehydrogenase family AC884_RS10335 PF00459 Inositol monophosphatase family AC884_RS10340 PF02146 Sir2 family AC884_RS10350 PF00132 Bacterial transferase hexapeptide (six repeats) AC884_RS10355 PF00342 Phosphoglucose isomerase AC884_RS10360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC884_RS10360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC884_RS10360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC884_RS10360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC884_RS10370 PF00072 Response regulator receiver domain AC884_RS10370 PF00196 Bacterial regulatory proteins, luxR family AC884_RS10385 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS10390 PF01144 Coenzyme A transferase AC884_RS10395 PF01144 Coenzyme A transferase AC884_RS10405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS10405 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS10405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS10415 PF00108 Thiolase, N-terminal domain AC884_RS10415 PF02803 Thiolase, C-terminal domain AC884_RS10425 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS10430 PF01575 MaoC like domain AC884_RS10435 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS10440 PF02515 CoA-transferase family III AC884_RS10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS10445 PF03466 LysR substrate binding domain AC884_RS10450 PF05362 Lon protease (S16) C-terminal proteolytic domain AC884_RS10450 PF00004 ATPase family associated with various cellular activities (AAA) AC884_RS10450 PF02190 ATP-dependent protease La (LON) substrate-binding domain AC884_RS10455 PF10431 C-terminal, D2-small domain, of ClpB protein AC884_RS10455 PF06689 ClpX C4-type zinc finger AC884_RS10455 PF07724 AAA domain (Cdc48 subfamily) AC884_RS10460 PF00574 Clp protease AC884_RS10465 PF05697 Bacterial trigger factor protein (TF) AC884_RS10465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC884_RS10465 PF05698 Bacterial trigger factor protein (TF) C-terminus AC884_RS10470 PF03350 Uncharacterized protein family, UPF0114 AC884_RS10485 PF00313 'Cold-shock' DNA-binding domain AC884_RS10520 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AC884_RS10520 PF00132 Bacterial transferase hexapeptide (six repeats) AC884_RS10520 PF14602 Hexapeptide repeat of succinyl-transferase AC884_RS10525 PF01546 Peptidase family M20/M25/M40 AC884_RS10525 PF07687 Peptidase dimerisation domain AC884_RS10530 PF05175 Methyltransferase small domain AC884_RS10535 PF12848 ABC transporter AC884_RS10535 PF00005 ABC transporter AC884_RS10540 PF07715 TonB-dependent Receptor Plug Domain AC884_RS10545 PF00580 UvrD/REP helicase N-terminal domain AC884_RS10545 PF13361 UvrD-like helicase C-terminal domain AC884_RS10565 PF00551 Formyl transferase AC884_RS10570 PF01687 Riboflavin kinase AC884_RS10570 PF06574 FAD synthetase AC884_RS10575 PF08264 Anticodon-binding domain of tRNA AC884_RS10575 PF00133 tRNA synthetases class I (I, L, M and V) AC884_RS10575 PF06827 Zinc finger found in FPG and IleRS AC884_RS10580 PF01252 Signal peptidase (SPase) II AC884_RS10585 PF02441 Flavoprotein AC884_RS10585 PF04127 DNA / pantothenate metabolism flavoprotein AC884_RS10595 PF01037 Lrp/AsnC ligand binding domain AC884_RS10615 PF13406 Transglycosylase SLT domain AC884_RS10620 PF04305 Protein of unknown function (DUF455) AC884_RS10640 PF08245 Mur ligase middle domain AC884_RS10640 PF08443 RimK-like ATP-grasp domain AC884_RS10640 PF02875 Mur ligase family, glutamate ligase domain AC884_RS10645 PF08245 Mur ligase middle domain AC884_RS10645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC884_RS10645 PF02875 Mur ligase family, glutamate ligase domain AC884_RS10650 PF05532 CsbD-like AC884_RS10660 PF04972 BON domain AC884_RS10670 PF00005 ABC transporter AC884_RS10675 PF13472 GDSL-like Lipase/Acylhydrolase family AC884_RS10680 PF13145 PPIC-type PPIASE domain AC884_RS10685 PF03009 Glycerophosphoryl diester phosphodiesterase family AC884_RS10690 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AC884_RS10695 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS10695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC884_RS10700 PF08534 Redoxin AC884_RS10700 PF00462 Glutaredoxin AC884_RS10710 PF09278 MerR, DNA binding AC884_RS10710 PF00376 MerR family regulatory protein AC884_RS10715 PF05958 tRNA (Uracil-5-)-methyltransferase AC884_RS10735 PF01476 LysM domain AC884_RS10735 PF01551 Peptidase family M23 AC884_RS10745 PF01975 Survival protein SurE AC884_RS10750 PF02660 Glycerol-3-phosphate acyltransferase AC884_RS10760 PF00814 Glycoprotease family AC884_RS10765 PF00860 Permease family AC884_RS10775 PF00085 Thioredoxin AC884_RS10780 PF01205 Uncharacterized protein family UPF0029 AC884_RS10795 PF00583 Acetyltransferase (GNAT) family AC884_RS10800 PF12802 MarR family AC884_RS10810 PF00202 Aminotransferase class-III AC884_RS10815 PF16868 NMT1-like family AC884_RS10840 PF03797 Autotransporter beta-domain AC884_RS10850 PF13091 PLD-like domain AC884_RS10850 PF13396 Phospholipase_D-nuclease N-terminal AC884_RS10855 PF01740 STAS domain AC884_RS10860 PF13581 Histidine kinase-like ATPase domain AC884_RS10865 PF01168 Alanine racemase, N-terminal domain AC884_RS10865 PF00842 Alanine racemase, C-terminal domain AC884_RS10875 PF07228 Stage II sporulation protein E (SpoIIE) AC884_RS10875 PF00672 HAMP domain AC884_RS10900 PF08281 Sigma-70, region 4 AC884_RS10900 PF04542 Sigma-70 region 2 AC884_RS10905 PF03958 Bacterial type II/III secretion system short domain AC884_RS10905 PF00263 Bacterial type II and III secretion system protein AC884_RS10915 PF01312 FlhB HrpN YscU SpaS Family AC884_RS10920 PF01311 Bacterial export proteins, family 1 AC884_RS10925 PF01313 Bacterial export proteins, family 3 AC884_RS10930 PF00813 FliP family AC884_RS10935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC884_RS10950 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC884_RS10950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC884_RS10950 PF18269 T3SS EscN ATPase C-terminal domain AC884_RS10955 PF02108 Flagellar assembly protein FliH AC884_RS10965 PF01514 Secretory protein of YscJ/FliF family AC884_RS11030 PF00771 FHIPEP family AC884_RS11065 PF03449 Transcription elongation factor, N-terminal AC884_RS11065 PF01272 Transcription elongation factor, GreA/GreB, C-term AC884_RS11070 PF00672 HAMP domain AC884_RS11070 PF02203 Tar ligand binding domain homologue AC884_RS11070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC884_RS11075 PF00860 Permease family AC884_RS11095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS11105 PF13419 Haloacid dehalogenase-like hydrolase AC884_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS11115 PF00005 ABC transporter AC884_RS11115 PF08402 TOBE domain AC884_RS11120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS11120 PF03466 LysR substrate binding domain AC884_RS11130 PF00581 Rhodanese-like domain AC884_RS11140 PF01435 Peptidase family M48 AC884_RS11145 PF08240 Alcohol dehydrogenase GroES-like domain AC884_RS11145 PF00107 Zinc-binding dehydrogenase AC884_RS11150 PF00892 EamA-like transporter family AC884_RS11160 PF01047 MarR family AC884_RS11170 PF00529 HlyD membrane-fusion protein of T1SS AC884_RS11170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC884_RS11175 PF07690 Major Facilitator Superfamily AC884_RS11180 PF00180 Isocitrate/isopropylmalate dehydrogenase AC884_RS11185 PF00392 Bacterial regulatory proteins, gntR family AC884_RS11185 PF00155 Aminotransferase class I and II AC884_RS11190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS11195 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS11200 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS11200 PF12911 N-terminal TM domain of oligopeptide transport permease C AC884_RS11205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS11205 PF00005 ABC transporter AC884_RS11215 PF00202 Aminotransferase class-III AC884_RS11220 PF07883 Cupin domain AC884_RS11225 PF00850 Histone deacetylase domain AC884_RS11230 PF07687 Peptidase dimerisation domain AC884_RS11230 PF01546 Peptidase family M20/M25/M40 AC884_RS11240 PF00171 Aldehyde dehydrogenase family AC884_RS11245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC884_RS11250 PF00202 Aminotransferase class-III AC884_RS11255 PF01235 Sodium:alanine symporter family AC884_RS11260 PF05872 Bacterial protein of unknown function (DUF853) AC884_RS11265 PF01709 Transcriptional regulator AC884_RS11270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AC884_RS11270 PF02843 Phosphoribosylglycinamide synthetase, C domain AC884_RS11270 PF02844 Phosphoribosylglycinamide synthetase, N domain AC884_RS11275 PF01218 Coproporphyrinogen III oxidase AC884_RS11280 PF01467 Cytidylyltransferase-like AC884_RS11290 PF02590 Predicted SPOUT methyltransferase AC884_RS11295 PF02545 Maf-like protein AC884_RS11300 PF03212 Pertactin AC884_RS11300 PF03797 Autotransporter beta-domain AC884_RS11340 PF00575 S1 RNA binding domain AC884_RS11340 PF10150 Ribonuclease E/G family AC884_RS11345 PF00800 Prephenate dehydratase AC884_RS11345 PF01842 ACT domain AC884_RS11355 PF07690 Major Facilitator Superfamily AC884_RS11360 PF00664 ABC transporter transmembrane region AC884_RS11360 PF00005 ABC transporter AC884_RS11365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AC884_RS11375 PF03692 Putative zinc- or iron-chelating domain AC884_RS11390 PF00884 Sulfatase AC884_RS11395 PF00534 Glycosyl transferases group 1 AC884_RS11395 PF13439 Glycosyltransferase Family 4 AC884_RS11400 PF00535 Glycosyl transferase family 2 AC884_RS11405 PF01522 Polysaccharide deacetylase AC884_RS11410 PF13439 Glycosyltransferase Family 4 AC884_RS11410 PF00534 Glycosyl transferases group 1 AC884_RS11415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC884_RS11415 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC884_RS11415 PF01336 OB-fold nucleic acid binding domain AC884_RS11415 PF02811 PHP domain AC884_RS11415 PF14579 Helix-hairpin-helix motif AC884_RS11425 PF00270 DEAD/DEAH box helicase AC884_RS11425 PF11898 Domain of unknown function (DUF3418) AC884_RS11425 PF04408 Helicase associated domain (HA2) AC884_RS11425 PF00271 Helicase conserved C-terminal domain AC884_RS11425 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AC884_RS11430 PF00583 Acetyltransferase (GNAT) family AC884_RS11430 PF00696 Amino acid kinase family AC884_RS11435 PF04362 Bacterial Fe(2+) trafficking AC884_RS11440 PF05506 Domain of unknown function (DUF756) AC884_RS11440 PF04185 Phosphoesterase family AC884_RS11445 PF01895 PhoU domain AC884_RS11450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AC884_RS11455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS11455 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS11455 PF18158 Adaptive response protein AidB N-terminal domain AC884_RS11460 PF02646 RmuC family AC884_RS11470 PF02245 Methylpurine-DNA glycosylase (MPG) AC884_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS11490 PF08402 TOBE domain AC884_RS11490 PF00005 ABC transporter AC884_RS11495 PF13416 Bacterial extracellular solute-binding protein AC884_RS11515 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS11525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS11525 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC884_RS11545 PF00285 Citrate synthase, C-terminal domain AC884_RS11550 PF03937 Flavinator of succinate dehydrogenase AC884_RS11555 PF13085 2Fe-2S iron-sulfur cluster binding domain AC884_RS11560 PF00890 FAD binding domain AC884_RS11560 PF02910 Fumarate reductase flavoprotein C-term AC884_RS11565 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AC884_RS11570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AC884_RS11575 PF07702 UTRA domain AC884_RS11575 PF00392 Bacterial regulatory proteins, gntR family AC884_RS11580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AC884_RS11580 PF00056 lactate/malate dehydrogenase, NAD binding domain AC884_RS11590 PF00285 Citrate synthase, C-terminal domain AC884_RS11595 PF00694 Aconitase C-terminal domain AC884_RS11595 PF00330 Aconitase family (aconitate hydratase) AC884_RS11600 PF04303 PrpF protein AC884_RS11605 PF03972 MmgE/PrpD family AC884_RS11610 PF03653 Uncharacterised protein family (UPF0093) AC884_RS11615 PF01170 Putative RNA methylase family UPF0020 AC884_RS11615 PF02926 THUMP domain AC884_RS11635 PF00501 AMP-binding enzyme AC884_RS11635 PF16177 Acetyl-coenzyme A synthetase N-terminus AC884_RS11635 PF13193 AMP-binding enzyme C-terminal domain AC884_RS11645 PF01430 Hsp33 protein AC884_RS11670 PF00211 Adenylate and Guanylate cyclase catalytic domain AC884_RS11675 PF04977 Septum formation initiator AC884_RS11680 PF03952 Enolase, N-terminal domain AC884_RS11680 PF00113 Enolase, C-terminal TIM barrel domain AC884_RS11690 PF00793 DAHP synthetase I family AC884_RS11695 PF06418 CTP synthase N-terminus AC884_RS11695 PF00117 Glutamine amidotransferase class-I AC884_RS11705 PF01321 Creatinase/Prolidase N-terminal domain AC884_RS11705 PF00557 Metallopeptidase family M24 AC884_RS11715 PF03576 Peptidase family S58 AC884_RS11720 PF12911 N-terminal TM domain of oligopeptide transport permease C AC884_RS11720 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS11725 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS11730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS11735 PF00005 ABC transporter AC884_RS11735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS11740 PF01112 Asparaginase AC884_RS11750 PF01144 Coenzyme A transferase AC884_RS11770 PF16363 GDP-mannose 4,6 dehydratase AC884_RS11785 PF01212 Beta-eliminating lyase AC884_RS11790 PF00892 EamA-like transporter family AC884_RS11795 PF16177 Acetyl-coenzyme A synthetase N-terminus AC884_RS11795 PF00501 AMP-binding enzyme AC884_RS11795 PF13193 AMP-binding enzyme C-terminal domain AC884_RS11805 PF03928 Haem-degrading AC884_RS11810 PF13193 AMP-binding enzyme C-terminal domain AC884_RS11810 PF00501 AMP-binding enzyme AC884_RS11810 PF16177 Acetyl-coenzyme A synthetase N-terminus AC884_RS11815 PF13193 AMP-binding enzyme C-terminal domain AC884_RS11815 PF00501 AMP-binding enzyme AC884_RS11815 PF16177 Acetyl-coenzyme A synthetase N-terminus AC884_RS11820 PF00877 NlpC/P60 family AC884_RS11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS11835 PF03466 LysR substrate binding domain AC884_RS11840 PF00171 Aldehyde dehydrogenase family AC884_RS11850 PF03466 LysR substrate binding domain AC884_RS11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS11860 PF02789 Cytosol aminopeptidase family, N-terminal domain AC884_RS11860 PF00883 Cytosol aminopeptidase family, catalytic domain AC884_RS11865 PF04364 DNA polymerase III chi subunit, HolC AC884_RS11875 PF01027 Inhibitor of apoptosis-promoting Bax1 AC884_RS11880 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS11890 PF00291 Pyridoxal-phosphate dependent enzyme AC884_RS11900 PF11967 Recombination protein O N terminal AC884_RS11900 PF02565 Recombination protein O C terminal AC884_RS11905 PF01926 50S ribosome-binding GTPase AC884_RS11905 PF07650 KH domain AC884_RS11910 PF14622 Ribonuclease-III-like AC884_RS11910 PF00035 Double-stranded RNA binding motif AC884_RS11915 PF10502 Signal peptidase, peptidase S26 AC884_RS11920 PF06421 GTP-binding protein LepA C-terminus AC884_RS11920 PF00679 Elongation factor G C-terminus AC884_RS11920 PF03144 Elongation factor Tu domain 2 AC884_RS11920 PF00009 Elongation factor Tu GTP binding domain AC884_RS11925 PF13180 PDZ domain AC884_RS11940 PF04542 Sigma-70 region 2 AC884_RS11940 PF08281 Sigma-70, region 4 AC884_RS11950 PF00109 Beta-ketoacyl synthase, N-terminal domain AC884_RS11950 PF02801 Beta-ketoacyl synthase, C-terminal domain AC884_RS11955 PF00550 Phosphopantetheine attachment site AC884_RS11965 PF00698 Acyl transferase domain AC884_RS11970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC884_RS11970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC884_RS11975 PF02504 Fatty acid synthesis protein AC884_RS11980 PF01783 Ribosomal L32p protein family AC884_RS11985 PF02620 Large ribosomal RNA subunit accumulation protein YceD AC884_RS11990 PF02545 Maf-like protein AC884_RS12000 PF01510 N-acetylmuramoyl-L-alanine amidase AC884_RS12005 PF12805 FUSC-like inner membrane protein yccS AC884_RS12015 PF03883 Peroxide stress protein YaaA AC884_RS12030 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AC884_RS12035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS12045 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS12050 PF01416 tRNA pseudouridine synthase AC884_RS12060 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC884_RS12060 PF02774 Semialdehyde dehydrogenase, dimerisation domain AC884_RS12065 PF00180 Isocitrate/isopropylmalate dehydrogenase AC884_RS12070 PF00694 Aconitase C-terminal domain AC884_RS12075 PF00330 Aconitase family (aconitate hydratase) AC884_RS12080 PF12849 PBP superfamily domain AC884_RS12085 PF00005 ABC transporter AC884_RS12090 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS12115 PF13247 4Fe-4S dicluster domain AC884_RS12120 PF01568 Molydopterin dinucleotide binding domain AC884_RS12120 PF00384 Molybdopterin oxidoreductase AC884_RS12120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AC884_RS12150 PF10609 NUBPL iron-transfer P-loop NTPase AC884_RS12155 PF12804 MobA-like NTP transferase domain AC884_RS12160 PF03453 MoeA N-terminal region (domain I and II) AC884_RS12160 PF03454 MoeA C-terminal region (domain IV) AC884_RS12160 PF00994 Probable molybdopterin binding domain AC884_RS12165 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AC884_RS12170 PF01435 Peptidase family M48 AC884_RS12175 PF01264 Chorismate synthase AC884_RS12180 PF00990 Diguanylate cyclase, GGDEF domain AC884_RS12180 PF08447 PAS fold AC884_RS12180 PF08448 PAS fold AC884_RS12180 PF00563 EAL domain AC884_RS12195 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS12200 PF08402 TOBE domain AC884_RS12200 PF00005 ABC transporter AC884_RS12205 PF03466 LysR substrate binding domain AC884_RS12205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS12210 PF00300 Histidine phosphatase superfamily (branch 1) AC884_RS12220 PF02142 MGS-like domain AC884_RS12220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC884_RS12220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AC884_RS12225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AC884_RS12225 PF00117 Glutamine amidotransferase class-I AC884_RS12230 PF00923 Transaldolase/Fructose-6-phosphate aldolase AC884_RS12255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC884_RS12255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC884_RS12260 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS12265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS12265 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS12265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS12270 PF03658 RnfH family Ubiquitin AC884_RS12275 PF03364 Polyketide cyclase / dehydrase and lipid transport AC884_RS12285 PF01668 SmpB protein AC884_RS12290 PF08448 PAS fold AC884_RS12290 PF00990 Diguanylate cyclase, GGDEF domain AC884_RS12295 PF01145 SPFH domain / Band 7 family AC884_RS12295 PF16200 C-terminal region of band_7 AC884_RS12310 PF00117 Glutamine amidotransferase class-I AC884_RS12310 PF00958 GMP synthase C terminal domain AC884_RS12315 PF02896 PEP-utilising enzyme, TIM barrel domain AC884_RS12315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AC884_RS12315 PF00391 PEP-utilising enzyme, mobile domain AC884_RS12320 PF03618 Kinase/pyrophosphorylase AC884_RS12325 PF00588 SpoU rRNA Methylase family AC884_RS12325 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC884_RS12330 PF01351 Ribonuclease HII AC884_RS12335 PF02684 Lipid-A-disaccharide synthetase AC884_RS12340 PF00132 Bacterial transferase hexapeptide (six repeats) AC884_RS12340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AC884_RS12345 PF07977 FabA-like domain AC884_RS12350 PF00132 Bacterial transferase hexapeptide (six repeats) AC884_RS12350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AC884_RS12355 PF03938 Outer membrane protein (OmpH-like) AC884_RS12360 PF07244 Surface antigen variable number repeat AC884_RS12360 PF01103 Surface antigen AC884_RS12365 PF02163 Peptidase family M50 AC884_RS12365 PF17820 PDZ domain AC884_RS12370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AC884_RS12370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AC884_RS12370 PF13288 DXP reductoisomerase C-terminal domain AC884_RS12380 PF01255 Putative undecaprenyl diphosphate synthase AC884_RS12385 PF01765 Ribosome recycling factor AC884_RS12390 PF00696 Amino acid kinase family AC884_RS12395 PF00889 Elongation factor TS AC884_RS12400 PF00318 Ribosomal protein S2 AC884_RS12405 PF00557 Metallopeptidase family M24 AC884_RS12410 PF01966 HD domain AC884_RS12410 PF08335 GlnD PII-uridylyltransferase AC884_RS12410 PF01909 Nucleotidyltransferase domain AC884_RS12425 PF00156 Phosphoribosyl transferase domain AC884_RS12440 PF08245 Mur ligase middle domain AC884_RS12440 PF02875 Mur ligase family, glutamate ligase domain AC884_RS12450 PF02465 Flagellar hook-associated protein 2 N-terminus AC884_RS12450 PF07195 Flagellar hook-associated protein 2 C-terminus AC884_RS12450 PF07196 Flagellin hook IN motif AC884_RS12455 PF02561 Flagellar protein FliS AC884_RS12475 PF01312 FlhB HrpN YscU SpaS Family AC884_RS12485 PF02049 Flagellar hook-basal body complex protein FliE AC884_RS12490 PF01514 Secretory protein of YscJ/FliF family AC884_RS12490 PF08345 Flagellar M-ring protein C-terminal AC884_RS12495 PF14841 FliG middle domain AC884_RS12495 PF01706 FliG C-terminal domain AC884_RS12495 PF14842 FliG N-terminal domain AC884_RS12505 PF18269 T3SS EscN ATPase C-terminal domain AC884_RS12505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC884_RS12530 PF03748 Flagellar basal body-associated protein FliL AC884_RS12535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC884_RS12535 PF02154 Flagellar motor switch protein FliM AC884_RS12540 PF16973 Flagellar motor switch protein FliN N-terminal AC884_RS12540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC884_RS12545 PF04347 Flagellar biosynthesis protein, FliO AC884_RS12550 PF00813 FliP family AC884_RS12555 PF01313 Bacterial export proteins, family 3 AC884_RS12560 PF01311 Bacterial export proteins, family 1 AC884_RS12570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC884_RS12570 PF08447 PAS fold AC884_RS12575 PF02203 Tar ligand binding domain homologue AC884_RS12575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC884_RS12575 PF00672 HAMP domain AC884_RS12580 PF02203 Tar ligand binding domain homologue AC884_RS12580 PF00672 HAMP domain AC884_RS12580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC884_RS12585 PF00669 Bacterial flagellin N-terminal helical region AC884_RS12590 PF00460 Flagella basal body rod protein AC884_RS12590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC884_RS12595 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AC884_RS12595 PF10135 Rod binding protein AC884_RS12600 PF02119 Flagellar P-ring protein AC884_RS12605 PF02107 Flagellar L-ring protein AC884_RS12610 PF00460 Flagella basal body rod protein AC884_RS12610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC884_RS12615 PF00460 Flagella basal body rod protein AC884_RS12615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC884_RS12620 PF07559 Flagellar basal body protein FlaE AC884_RS12620 PF00460 Flagella basal body rod protein AC884_RS12620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC884_RS12625 PF13861 FlgD Tudor-like domain AC884_RS12625 PF13860 FlgD Ig-like domain AC884_RS12625 PF03963 Flagellar hook capping protein - N-terminal region AC884_RS12630 PF00460 Flagella basal body rod protein AC884_RS12630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC884_RS12635 PF00460 Flagella basal body rod protein AC884_RS12645 PF04316 Anti-sigma-28 factor, FlgM AC884_RS12655 PF00448 SRP54-type protein, GTPase domain AC884_RS12665 PF01312 FlhB HrpN YscU SpaS Family AC884_RS12675 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS12680 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS12685 PF00005 ABC transporter AC884_RS12695 PF08546 Ketopantoate reductase PanE/ApbA C terminal AC884_RS12695 PF02558 Ketopantoate reductase PanE/ApbA AC884_RS12700 PF13378 Enolase C-terminal domain-like AC884_RS12705 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS12715 PF00694 Aconitase C-terminal domain AC884_RS12720 PF00356 Bacterial regulatory proteins, lacI family AC884_RS12725 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS12730 PF02515 CoA-transferase family III AC884_RS12740 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS12745 PF13607 Succinyl-CoA ligase like flavodoxin domain AC884_RS12745 PF13380 CoA binding domain AC884_RS12750 PF00392 Bacterial regulatory proteins, gntR family AC884_RS12750 PF07729 FCD domain AC884_RS12755 PF03328 HpcH/HpaI aldolase/citrate lyase family AC884_RS12765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS12765 PF03466 LysR substrate binding domain AC884_RS12775 PF12951 Passenger-associated-transport-repeat AC884_RS12785 PF03551 Transcriptional regulator PadR-like family AC884_RS12795 PF03372 Endonuclease/Exonuclease/phosphatase family AC884_RS12800 PF13091 PLD-like domain AC884_RS12815 PF03706 Lysylphosphatidylglycerol synthase TM region AC884_RS12845 PF11896 Domain of unknown function (DUF3416) AC884_RS12845 PF00128 Alpha amylase, catalytic domain AC884_RS12850 PF16657 Maltogenic Amylase, C-terminal domain AC884_RS12850 PF00128 Alpha amylase, catalytic domain AC884_RS12855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC884_RS12855 PF00128 Alpha amylase, catalytic domain AC884_RS12855 PF02806 Alpha amylase, C-terminal all-beta domain AC884_RS12860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC884_RS12860 PF00128 Alpha amylase, catalytic domain AC884_RS12865 PF11941 Domain of unknown function (DUF3459) AC884_RS12865 PF00128 Alpha amylase, catalytic domain AC884_RS12865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC884_RS12875 PF00128 Alpha amylase, catalytic domain AC884_RS12885 PF08543 Phosphomethylpyrimidine kinase AC884_RS12890 PF01168 Alanine racemase, N-terminal domain AC884_RS12895 PF00392 Bacterial regulatory proteins, gntR family AC884_RS12895 PF00155 Aminotransferase class I and II AC884_RS12910 PF00582 Universal stress protein family AC884_RS12915 PF00248 Aldo/keto reductase family AC884_RS12925 PF02868 Thermolysin metallopeptidase, alpha-helical domain AC884_RS12925 PF01447 Thermolysin metallopeptidase, catalytic domain AC884_RS12925 PF16485 Protealysin propeptide AC884_RS12930 PF07681 DoxX AC884_RS12955 PF00578 AhpC/TSA family AC884_RS12960 PF03960 ArsC family AC884_RS12965 PF02515 CoA-transferase family III AC884_RS12985 PF00255 Glutathione peroxidase AC884_RS12990 PF00043 Glutathione S-transferase, C-terminal domain AC884_RS12990 PF02798 Glutathione S-transferase, N-terminal domain AC884_RS13015 PF02666 Phosphatidylserine decarboxylase AC884_RS13020 PF01070 FMN-dependent dehydrogenase AC884_RS13025 PF03180 NLPA lipoprotein AC884_RS13030 PF08808 RES domain AC884_RS13040 PF04241 Protein of unknown function (DUF423) AC884_RS13060 PF13458 Periplasmic binding protein AC884_RS13065 PF17912 MalK OB fold domain AC884_RS13065 PF00005 ABC transporter AC884_RS13070 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS13075 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS13080 PF13416 Bacterial extracellular solute-binding protein AC884_RS13085 PF14748 Pyrroline-5-carboxylate reductase dimerisation AC884_RS13085 PF03807 NADP oxidoreductase coenzyme F420-dependent AC884_RS13090 PF02592 Putative vitamin uptake transporter AC884_RS13100 PF13458 Periplasmic binding protein AC884_RS13105 PF02653 Branched-chain amino acid transport system / permease component AC884_RS13110 PF11862 Domain of unknown function (DUF3382) AC884_RS13110 PF02653 Branched-chain amino acid transport system / permease component AC884_RS13115 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS13115 PF00005 ABC transporter AC884_RS13120 PF00005 ABC transporter AC884_RS13125 PF01177 Asp/Glu/Hydantoin racemase AC884_RS13140 PF00892 EamA-like transporter family AC884_RS13155 PF04235 Protein of unknown function (DUF418) AC884_RS13160 PF00521 DNA gyrase/topoisomerase IV, subunit A AC884_RS13170 PF00986 DNA gyrase B subunit, carboxyl terminus AC884_RS13170 PF01751 Toprim domain AC884_RS13170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS13170 PF00204 DNA gyrase B AC884_RS13175 PF00085 Thioredoxin AC884_RS13180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC884_RS13180 PF07497 Rho termination factor, RNA-binding domain AC884_RS13180 PF07498 Rho termination factor, N-terminal domain AC884_RS13190 PF03710 Glutamate-ammonia ligase adenylyltransferase AC884_RS13190 PF08335 GlnD PII-uridylyltransferase AC884_RS13195 PF02677 Epoxyqueuosine reductase QueH AC884_RS13200 PF03315 Serine dehydratase beta chain AC884_RS13200 PF03313 Serine dehydratase alpha chain AC884_RS13205 PF02690 Na+/Pi-cotransporter AC884_RS13210 PF01738 Dienelactone hydrolase family AC884_RS13220 PF01612 3'-5' exonuclease AC884_RS13220 PF00476 DNA polymerase family A AC884_RS13220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AC884_RS13220 PF01367 5'-3' exonuclease, C-terminal SAM fold AC884_RS13225 PF03641 Possible lysine decarboxylase AC884_RS13240 PF00679 Elongation factor G C-terminus AC884_RS13240 PF03144 Elongation factor Tu domain 2 AC884_RS13240 PF00009 Elongation factor Tu GTP binding domain AC884_RS13245 PF01509 TruB family pseudouridylate synthase (N terminal domain) AC884_RS13245 PF16198 tRNA pseudouridylate synthase B C-terminal domain AC884_RS13250 PF02033 Ribosome-binding factor A AC884_RS13255 PF00009 Elongation factor Tu GTP binding domain AC884_RS13255 PF11987 Translation-initiation factor 2 AC884_RS13255 PF08364 Bacterial translation initiation factor IF-2 associated region AC884_RS13255 PF04760 Translation initiation factor IF-2, N-terminal region AC884_RS13260 PF13184 NusA-like KH domain AC884_RS13260 PF08529 NusA N-terminal domain AC884_RS13265 PF02576 RimP N-terminal domain AC884_RS13265 PF17384 RimP C-terminal SH3 domain AC884_RS13270 PF00849 RNA pseudouridylate synthase AC884_RS13270 PF01479 S4 domain AC884_RS13275 PF04079 Segregation and condensation complex subunit ScpB AC884_RS13285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS13285 PF03466 LysR substrate binding domain AC884_RS13290 PF00881 Nitroreductase family AC884_RS13295 PF02492 CobW/HypB/UreG, nucleotide-binding domain AC884_RS13295 PF07683 Cobalamin synthesis protein cobW C-terminal domain AC884_RS13315 PF02798 Glutathione S-transferase, N-terminal domain AC884_RS13315 PF14497 Glutathione S-transferase, C-terminal domain AC884_RS13320 PF02401 LytB protein AC884_RS13325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC884_RS13330 PF04002 RadC-like JAB domain AC884_RS13335 PF04199 Putative cyclase AC884_RS13340 PF03301 Tryptophan 2,3-dioxygenase AC884_RS13345 PF01197 Ribosomal protein L31 AC884_RS13355 PF01554 MatE AC884_RS13370 PF18073 Rubredoxin metal binding domain AC884_RS13375 PF12450 von Willebrand factor AC884_RS13375 PF12034 Domain of unknown function (DUF3520) AC884_RS13375 PF00092 von Willebrand factor type A domain AC884_RS13380 PF04542 Sigma-70 region 2 AC884_RS13380 PF04545 Sigma-70, region 4 AC884_RS13400 PF00842 Alanine racemase, C-terminal domain AC884_RS13400 PF01168 Alanine racemase, N-terminal domain AC884_RS13415 PF01593 Flavin containing amine oxidoreductase AC884_RS13415 PF01593 Flavin containing amine oxidoreductase AC884_RS13420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AC884_RS13430 PF01061 ABC-2 type transporter AC884_RS13435 PF00005 ABC transporter AC884_RS13455 PF02424 ApbE family AC884_RS13460 PF00667 FAD binding domain AC884_RS13460 PF00258 Flavodoxin AC884_RS13460 PF00175 Oxidoreductase NAD-binding domain AC884_RS13470 PF07969 Amidohydrolase family AC884_RS13475 PF03466 LysR substrate binding domain AC884_RS13475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS13485 PF09370 Phosphoenolpyruvate hydrolase-like AC884_RS13500 PF03797 Autotransporter beta-domain AC884_RS13500 PF03212 Pertactin AC884_RS13505 PF03797 Autotransporter beta-domain AC884_RS13505 PF03212 Pertactin AC884_RS13520 PF07724 AAA domain (Cdc48 subfamily) AC884_RS13520 PF10431 C-terminal, D2-small domain, of ClpB protein AC884_RS13520 PF02861 Clp amino terminal domain, pathogenicity island component AC884_RS13520 PF00004 ATPase family associated with various cellular activities (AAA) AC884_RS13520 PF17871 AAA lid domain AC884_RS13525 PF13545 Crp-like helix-turn-helix domain AC884_RS13525 PF00027 Cyclic nucleotide-binding domain AC884_RS13540 PF00293 NUDIX domain AC884_RS13545 PF12843 Putative quorum-sensing-regulated virulence factor AC884_RS13555 PF12680 SnoaL-like domain AC884_RS13555 PF04542 Sigma-70 region 2 AC884_RS13555 PF08281 Sigma-70, region 4 AC884_RS13560 PF02627 Carboxymuconolactone decarboxylase family AC884_RS13590 PF00155 Aminotransferase class I and II AC884_RS13595 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS13600 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS13605 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS13610 PF00005 ABC transporter AC884_RS13630 PF16970 Type-1 fimbrial protein, A AC884_RS13635 PF14535 AMP-binding enzyme C-terminal domain AC884_RS13635 PF00501 AMP-binding enzyme AC884_RS13640 PF03061 Thioesterase superfamily AC884_RS13645 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS13650 PF00171 Aldehyde dehydrogenase family AC884_RS13660 PF00175 Oxidoreductase NAD-binding domain AC884_RS13660 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS13660 PF00970 Oxidoreductase FAD-binding domain AC884_RS13665 PF01883 Iron-sulfur cluster assembly protein AC884_RS13670 PF05138 Phenylacetic acid catabolic protein AC884_RS13675 PF06243 Phenylacetic acid degradation B AC884_RS13680 PF05138 Phenylacetic acid catabolic protein AC884_RS13685 PF08223 PaaX-like protein C-terminal domain AC884_RS13685 PF07848 PaaX-like protein AC884_RS13690 PF03853 YjeF-related protein N-terminus AC884_RS13695 PF00929 Exonuclease AC884_RS13700 PF01435 Peptidase family M48 AC884_RS13705 PF03193 RsgA GTPase AC884_RS13710 PF12911 N-terminal TM domain of oligopeptide transport permease C AC884_RS13710 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS13715 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS13720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS13730 PF03466 LysR substrate binding domain AC884_RS13730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS13755 PF00543 Nitrogen regulatory protein P-II AC884_RS13760 PF00795 Carbon-nitrogen hydrolase AC884_RS13760 PF02540 NAD synthase AC884_RS13765 PF00924 Mechanosensitive ion channel AC884_RS13770 PF00206 Lyase AC884_RS13770 PF14698 Argininosuccinate lyase C-terminal AC884_RS13790 PF06463 Molybdenum Cofactor Synthesis C AC884_RS13790 PF04055 Radical SAM superfamily AC884_RS13795 PF03454 MoeA C-terminal region (domain IV) AC884_RS13795 PF03453 MoeA N-terminal region (domain I and II) AC884_RS13795 PF00994 Probable molybdopterin binding domain AC884_RS13800 PF00994 Probable molybdopterin binding domain AC884_RS13805 PF02391 MoaE protein AC884_RS13815 PF01967 MoaC family AC884_RS13825 PF01738 Dienelactone hydrolase family AC884_RS13835 PF08534 Redoxin AC884_RS13850 PF06968 Biotin and Thiamin Synthesis associated domain AC884_RS13850 PF04055 Radical SAM superfamily AC884_RS13870 PF00403 Heavy-metal-associated domain AC884_RS13875 PF13411 MerR HTH family regulatory protein AC884_RS13900 PF02104 SURF1 family AC884_RS13905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AC884_RS13910 PF00510 Cytochrome c oxidase subunit III AC884_RS13915 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC884_RS13925 PF07690 Major Facilitator Superfamily AC884_RS13925 PF00083 Sugar (and other) transporter AC884_RS13940 PF04380 Membrane fusogenic activity AC884_RS13945 PF00543 Nitrogen regulatory protein P-II AC884_RS13955 PF03797 Autotransporter beta-domain AC884_RS13955 PF03212 Pertactin AC884_RS13965 PF00440 Bacterial regulatory proteins, tetR family AC884_RS13970 PF07690 Major Facilitator Superfamily AC884_RS13975 PF00005 ABC transporter AC884_RS13980 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS13980 PF00005 ABC transporter AC884_RS13985 PF11862 Domain of unknown function (DUF3382) AC884_RS13985 PF02653 Branched-chain amino acid transport system / permease component AC884_RS13990 PF02653 Branched-chain amino acid transport system / permease component AC884_RS13995 PF13458 Periplasmic binding protein AC884_RS14005 PF01619 Proline dehydrogenase AC884_RS14005 PF14850 DNA-binding domain of Proline dehydrogenase AC884_RS14005 PF00171 Aldehyde dehydrogenase family AC884_RS14005 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AC884_RS14015 PF02470 MlaD protein AC884_RS14020 PF04403 Paraquat-inducible protein A AC884_RS14025 PF17871 AAA lid domain AC884_RS14025 PF00004 ATPase family associated with various cellular activities (AAA) AC884_RS14025 PF02861 Clp amino terminal domain, pathogenicity island component AC884_RS14025 PF10431 C-terminal, D2-small domain, of ClpB protein AC884_RS14025 PF07724 AAA domain (Cdc48 subfamily) AC884_RS14030 PF00912 Transglycosylase AC884_RS14030 PF06832 Penicillin-Binding Protein C-terminus Family AC884_RS14030 PF00905 Penicillin binding protein transpeptidase domain AC884_RS14035 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AC884_RS14035 PF01835 MG2 domain AC884_RS14035 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AC884_RS14035 PF17962 Bacterial macroglobulin domain 6 AC884_RS14035 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AC884_RS14035 PF07703 Alpha-2-macroglobulin bait region domain AC884_RS14035 PF00207 Alpha-2-macroglobulin family AC884_RS14035 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AC884_RS14040 PF02617 ATP-dependent Clp protease adaptor protein ClpS AC884_RS14045 PF00313 'Cold-shock' DNA-binding domain AC884_RS14055 PF00108 Thiolase, N-terminal domain AC884_RS14055 PF02803 Thiolase, C-terminal domain AC884_RS14060 PF00654 Voltage gated chloride channel AC884_RS14065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC884_RS14065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC884_RS14070 PF13742 OB-fold nucleic acid binding domain AC884_RS14070 PF02601 Exonuclease VII, large subunit AC884_RS14080 PF01618 MotA/TolQ/ExbB proton channel family AC884_RS14085 PF02472 Biopolymer transport protein ExbD/TolR AC884_RS14090 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AC884_RS14095 PF03966 Trm112p-like protein AC884_RS14100 PF02348 Cytidylyltransferase AC884_RS14105 PF05191 Adenylate kinase, active site lid AC884_RS14110 PF00106 short chain dehydrogenase AC884_RS14115 PF03023 Lipid II flippase MurJ AC884_RS14125 PF01649 Ribosomal protein S20 AC884_RS14130 PF03328 HpcH/HpaI aldolase/citrate lyase family AC884_RS14145 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS14155 PF02615 Malate/L-lactate dehydrogenase AC884_RS14170 PF00291 Pyridoxal-phosphate dependent enzyme AC884_RS14170 PF14821 Threonine synthase N terminus AC884_RS14175 PF01842 ACT domain AC884_RS14175 PF00742 Homoserine dehydrogenase AC884_RS14175 PF03447 Homoserine dehydrogenase, NAD binding domain AC884_RS14180 PF00155 Aminotransferase class I and II AC884_RS14185 PF04430 Protein of unknown function (DUF498/DUF598) AC884_RS14190 PF00578 AhpC/TSA family AC884_RS14195 PF02562 PhoH-like protein AC884_RS14195 PF13638 PIN domain AC884_RS14200 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AC884_RS14205 PF13593 SBF-like CPA transporter family (DUF4137) AC884_RS14210 PF00772 DnaB-like helicase N terminal domain AC884_RS14210 PF03796 DnaB-like helicase C terminal domain AC884_RS14220 PF01281 Ribosomal protein L9, N-terminal domain AC884_RS14220 PF03948 Ribosomal protein L9, C-terminal domain AC884_RS14225 PF01084 Ribosomal protein S18 AC884_RS14235 PF01250 Ribosomal protein S6 AC884_RS14240 PF02649 Type I GTP cyclohydrolase folE2 AC884_RS14245 PF02779 Transketolase, pyrimidine binding domain AC884_RS14245 PF02780 Transketolase, C-terminal domain AC884_RS14245 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AC884_RS14250 PF00348 Polyprenyl synthetase AC884_RS14255 PF02609 Exonuclease VII small subunit AC884_RS14265 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS14285 PF00571 CBS domain AC884_RS14285 PF03448 MgtE intracellular N domain AC884_RS14285 PF01769 Divalent cation transporter AC884_RS14290 PF03061 Thioesterase superfamily AC884_RS14295 PF03601 Conserved hypothetical protein 698 AC884_RS14300 PF03466 LysR substrate binding domain AC884_RS14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS14305 PF01546 Peptidase family M20/M25/M40 AC884_RS14305 PF07687 Peptidase dimerisation domain AC884_RS14310 PF00501 AMP-binding enzyme AC884_RS14310 PF13193 AMP-binding enzyme C-terminal domain AC884_RS14325 PF00459 Inositol monophosphatase family AC884_RS14335 PF01055 Glycosyl hydrolases family 31 AC884_RS14335 PF13802 Galactose mutarotase-like AC884_RS14340 PF00005 ABC transporter AC884_RS14340 PF09383 NIL domain AC884_RS14345 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS14350 PF03180 NLPA lipoprotein AC884_RS14365 PF00465 Iron-containing alcohol dehydrogenase AC884_RS14395 PF07729 FCD domain AC884_RS14395 PF00392 Bacterial regulatory proteins, gntR family AC884_RS14400 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS14420 PF14785 Maltose transport system permease protein MalF P2 domain AC884_RS14420 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS14425 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS14430 PF08402 TOBE domain AC884_RS14430 PF00005 ABC transporter AC884_RS14435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC884_RS14435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS14445 PF01547 Bacterial extracellular solute-binding protein AC884_RS14460 PF00376 MerR family regulatory protein AC884_RS14460 PF09278 MerR, DNA binding AC884_RS14465 PF03352 Methyladenine glycosylase AC884_RS14470 PF05170 AsmA family AC884_RS14480 PF00440 Bacterial regulatory proteins, tetR family AC884_RS14545 PF03466 LysR substrate binding domain AC884_RS14545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS14550 PF02548 Ketopantoate hydroxymethyltransferase AC884_RS14555 PF13609 Gram-negative porin AC884_RS14575 PF00083 Sugar (and other) transporter AC884_RS14585 PF03466 LysR substrate binding domain AC884_RS14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS14590 PF00155 Aminotransferase class I and II AC884_RS14595 PF01966 HD domain AC884_RS14600 PF00403 Heavy-metal-associated domain AC884_RS14620 PF08240 Alcohol dehydrogenase GroES-like domain AC884_RS14620 PF00107 Zinc-binding dehydrogenase AC884_RS14635 PF00005 ABC transporter AC884_RS14640 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS14650 PF13193 AMP-binding enzyme C-terminal domain AC884_RS14650 PF00501 AMP-binding enzyme AC884_RS14660 PF01037 Lrp/AsnC ligand binding domain AC884_RS14660 PF13404 AsnC-type helix-turn-helix domain AC884_RS14665 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS14670 PF00677 Lumazine binding domain AC884_RS14675 PF01425 Amidase AC884_RS14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS14690 PF03466 LysR substrate binding domain AC884_RS14695 PF07690 Major Facilitator Superfamily AC884_RS14700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AC884_RS14710 PF03466 LysR substrate binding domain AC884_RS14710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS14725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC884_RS14730 PF00005 ABC transporter AC884_RS14745 PF02653 Branched-chain amino acid transport system / permease component AC884_RS14750 PF01042 Endoribonuclease L-PSP AC884_RS14755 PF13193 AMP-binding enzyme C-terminal domain AC884_RS14755 PF00501 AMP-binding enzyme AC884_RS14765 PF01614 Bacterial transcriptional regulator AC884_RS14765 PF09339 IclR helix-turn-helix domain AC884_RS14780 PF00005 ABC transporter AC884_RS14785 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS14800 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS14805 PF02515 CoA-transferase family III AC884_RS14810 PF01425 Amidase AC884_RS14820 PF07729 FCD domain AC884_RS14820 PF00392 Bacterial regulatory proteins, gntR family AC884_RS14830 PF01594 AI-2E family transporter AC884_RS14850 PF01322 Cytochrome C' AC884_RS14855 PF08328 Adenylosuccinate lyase C-terminal AC884_RS14855 PF00206 Lyase AC884_RS14860 PF13417 Glutathione S-transferase, N-terminal domain AC884_RS14860 PF00043 Glutathione S-transferase, C-terminal domain AC884_RS14865 PF01925 Sulfite exporter TauE/SafE AC884_RS14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS14875 PF03466 LysR substrate binding domain AC884_RS14880 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS14890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AC884_RS14890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AC884_RS14895 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AC884_RS14900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AC884_RS14905 PF02233 NAD(P) transhydrogenase beta subunit AC884_RS14915 PF07715 TonB-dependent Receptor Plug Domain AC884_RS14915 PF00593 TonB dependent receptor AC884_RS14920 PF00756 Putative esterase AC884_RS14925 PF02754 Cysteine-rich domain AC884_RS14925 PF13183 4Fe-4S dicluster domain AC884_RS14930 PF01565 FAD binding domain AC884_RS14935 PF02913 FAD linked oxidases, C-terminal domain AC884_RS14935 PF01565 FAD binding domain AC884_RS14940 PF02913 FAD linked oxidases, C-terminal domain AC884_RS14940 PF01565 FAD binding domain AC884_RS14945 PF05860 haemagglutination activity domain AC884_RS14945 PF13018 Extended Signal Peptide of Type V secretion system AC884_RS14945 PF13018 Extended Signal Peptide of Type V secretion system AC884_RS14945 PF05594 Haemagluttinin repeat AC884_RS14945 PF13332 Hemagglutinin repeat AC884_RS14945 PF05860 haemagglutination activity domain AC884_RS14945 PF13332 Hemagglutinin repeat AC884_RS14945 PF05594 Haemagluttinin repeat AC884_RS14950 PF00793 DAHP synthetase I family AC884_RS14955 PF01523 Putative modulator of DNA gyrase AC884_RS14960 PF00795 Carbon-nitrogen hydrolase AC884_RS14980 PF04542 Sigma-70 region 2 AC884_RS14980 PF08281 Sigma-70, region 4 AC884_RS14990 PF04461 Protein of unknown function (DUF520) AC884_RS15005 PF01476 LysM domain AC884_RS15005 PF01551 Peptidase family M23 AC884_RS15020 PF00593 TonB dependent receptor AC884_RS15020 PF07715 TonB-dependent Receptor Plug Domain AC884_RS15035 PF05114 Protein of unknown function (DUF692) AC884_RS15055 PF01022 Bacterial regulatory protein, arsR family AC884_RS15060 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AC884_RS15065 PF00510 Cytochrome c oxidase subunit III AC884_RS15070 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC884_RS15075 PF06481 COX Aromatic Rich Motif AC884_RS15075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC884_RS15080 PF00072 Response regulator receiver domain AC884_RS15095 PF02678 Pirin AC884_RS15095 PF05726 Pirin C-terminal cupin domain AC884_RS15115 PF02515 CoA-transferase family III AC884_RS15120 PF03466 LysR substrate binding domain AC884_RS15120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS15125 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS15135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS15135 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS15135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS15135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS15135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS15135 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS15150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AC884_RS15150 PF01872 RibD C-terminal domain AC884_RS15165 PF03477 ATP cone domain AC884_RS15170 PF00464 Serine hydroxymethyltransferase AC884_RS15180 PF01479 S4 domain AC884_RS15180 PF00579 tRNA synthetases class I (W and Y) AC884_RS15190 PF01551 Peptidase family M23 AC884_RS15190 PF08460 Bacterial SH3 domain AC884_RS15195 PF03702 Anhydro-N-acetylmuramic acid kinase AC884_RS15200 PF01521 Iron-sulphur cluster biosynthesis AC884_RS15210 PF02774 Semialdehyde dehydrogenase, dimerisation domain AC884_RS15210 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC884_RS15215 PF00380 Ribosomal protein S9/S16 AC884_RS15220 PF00572 Ribosomal protein L13 AC884_RS15225 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS15230 PF01523 Putative modulator of DNA gyrase AC884_RS15235 PF04751 Protein of unknown function (DUF615) AC884_RS15240 PF02230 Phospholipase/Carboxylesterase AC884_RS15250 PF00005 ABC transporter AC884_RS15255 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS15260 PF00857 Isochorismatase family AC884_RS15265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC884_RS15270 PF00271 Helicase conserved C-terminal domain AC884_RS15270 PF03880 DbpA RNA binding domain AC884_RS15270 PF00270 DEAD/DEAH box helicase AC884_RS15280 PF07729 FCD domain AC884_RS15280 PF00392 Bacterial regulatory proteins, gntR family AC884_RS15295 PF13607 Succinyl-CoA ligase like flavodoxin domain AC884_RS15295 PF00583 Acetyltransferase (GNAT) family AC884_RS15295 PF13380 CoA binding domain AC884_RS15300 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC884_RS15315 PF01037 Lrp/AsnC ligand binding domain AC884_RS15330 PF02867 Ribonucleotide reductase, barrel domain AC884_RS15330 PF00317 Ribonucleotide reductase, all-alpha domain AC884_RS15330 PF03477 ATP cone domain AC884_RS15335 PF00268 Ribonucleotide reductase, small chain AC884_RS15350 PF13193 AMP-binding enzyme C-terminal domain AC884_RS15350 PF00501 AMP-binding enzyme AC884_RS15355 PF03062 MBOAT, membrane-bound O-acyltransferase family AC884_RS15380 PF00294 pfkB family carbohydrate kinase AC884_RS15395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC884_RS15395 PF02785 Biotin carboxylase C-terminal domain AC884_RS15395 PF00289 Biotin carboxylase, N-terminal domain AC884_RS15400 PF00364 Biotin-requiring enzyme AC884_RS15405 PF01220 Dehydroquinase class II AC884_RS15410 PF08534 Redoxin AC884_RS15415 PF08245 Mur ligase middle domain AC884_RS15415 PF02875 Mur ligase family, glutamate ligase domain AC884_RS15415 PF01225 Mur ligase family, catalytic domain AC884_RS15420 PF05728 Uncharacterised protein family (UPF0227) AC884_RS15425 PF00773 RNB domain AC884_RS15435 PF08501 Shikimate dehydrogenase substrate binding domain AC884_RS15435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AC884_RS15435 PF01488 Shikimate / quinate 5-dehydrogenase AC884_RS15445 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AC884_RS15455 PF01037 Lrp/AsnC ligand binding domain AC884_RS15460 PF01266 FAD dependent oxidoreductase AC884_RS15465 PF00106 short chain dehydrogenase AC884_RS15475 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS15485 PF02810 SEC-C motif AC884_RS15485 PF01043 SecA preprotein cross-linking domain AC884_RS15485 PF07516 SecA Wing and Scaffold domain AC884_RS15485 PF07517 SecA DEAD-like domain AC884_RS15490 PF08525 Opacity-associated protein A N-terminal motif AC884_RS15490 PF01551 Peptidase family M23 AC884_RS15490 PF01476 LysM domain AC884_RS15500 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AC884_RS15505 PF00091 Tubulin/FtsZ family, GTPase domain AC884_RS15505 PF12327 FtsZ family, C-terminal domain AC884_RS15510 PF02491 SHS2 domain inserted in FTSA AC884_RS15515 PF03799 Cell division protein FtsQ AC884_RS15515 PF08478 POTRA domain, FtsQ-type AC884_RS15520 PF01820 D-ala D-ala ligase N-terminus AC884_RS15520 PF07478 D-ala D-ala ligase C-terminus AC884_RS15525 PF08245 Mur ligase middle domain AC884_RS15525 PF02875 Mur ligase family, glutamate ligase domain AC884_RS15525 PF01225 Mur ligase family, catalytic domain AC884_RS15530 PF04101 Glycosyltransferase family 28 C-terminal domain AC884_RS15530 PF03033 Glycosyltransferase family 28 N-terminal domain AC884_RS15535 PF01098 Cell cycle protein AC884_RS15540 PF08245 Mur ligase middle domain AC884_RS15540 PF02875 Mur ligase family, glutamate ligase domain AC884_RS15545 PF00953 Glycosyl transferase family 4 AC884_RS15550 PF02875 Mur ligase family, glutamate ligase domain AC884_RS15550 PF08245 Mur ligase middle domain AC884_RS15555 PF00905 Penicillin binding protein transpeptidase domain AC884_RS15555 PF03717 Penicillin-binding Protein dimerisation domain AC884_RS15560 PF04999 Cell division protein FtsL AC884_RS15565 PF01795 MraW methylase family AC884_RS15570 PF02381 MraZ protein, putative antitoxin-like AC884_RS15580 PF12848 ABC transporter AC884_RS15580 PF16326 ABC transporter C-terminal domain AC884_RS15580 PF00005 ABC transporter AC884_RS15585 PF01979 Amidohydrolase family AC884_RS15590 PF07687 Peptidase dimerisation domain AC884_RS15590 PF01546 Peptidase family M20/M25/M40 AC884_RS15630 PF01037 Lrp/AsnC ligand binding domain AC884_RS15635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC884_RS15640 PF01625 Peptide methionine sulfoxide reductase AC884_RS15645 PF00034 Cytochrome c AC884_RS15650 PF00920 Dehydratase family AC884_RS15655 PF01790 Prolipoprotein diacylglyceryl transferase AC884_RS15695 PF01970 Tripartite tricarboxylate transporter TctA family AC884_RS15705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC884_RS15705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC884_RS15710 PF02525 Flavodoxin-like fold AC884_RS15725 PF01923 Cobalamin adenosyltransferase AC884_RS15735 PF07724 AAA domain (Cdc48 subfamily) AC884_RS15735 PF10431 C-terminal, D2-small domain, of ClpB protein AC884_RS15735 PF00004 ATPase family associated with various cellular activities (AAA) AC884_RS15740 PF00227 Proteasome subunit AC884_RS15745 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC884_RS15750 PF02492 CobW/HypB/UreG, nucleotide-binding domain AC884_RS15750 PF07683 Cobalamin synthesis protein cobW C-terminal domain AC884_RS15755 PF01475 Ferric uptake regulator family AC884_RS15765 PF00005 ABC transporter AC884_RS15770 PF00950 ABC 3 transport family AC884_RS15775 PF01297 Zinc-uptake complex component A periplasmic AC884_RS15785 PF03824 High-affinity nickel-transport protein AC884_RS15790 PF00593 TonB dependent receptor AC884_RS15790 PF07715 TonB-dependent Receptor Plug Domain AC884_RS15795 PF00589 Phage integrase family AC884_RS15795 PF02899 Phage integrase, N-terminal SAM-like domain AC884_RS15805 PF01678 Diaminopimelate epimerase AC884_RS15810 PF03279 Bacterial lipid A biosynthesis acyltransferase AC884_RS15820 PF02772 S-adenosylmethionine synthetase, central domain AC884_RS15820 PF00438 S-adenosylmethionine synthetase, N-terminal domain AC884_RS15820 PF02773 S-adenosylmethionine synthetase, C-terminal domain AC884_RS15830 PF00534 Glycosyl transferases group 1 AC884_RS15830 PF13439 Glycosyltransferase Family 4 AC884_RS15835 PF05221 S-adenosyl-L-homocysteine hydrolase AC884_RS15835 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AC884_RS15840 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AC884_RS15845 PF02219 Methylenetetrahydrofolate reductase AC884_RS15855 PF03466 LysR substrate binding domain AC884_RS15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS15860 PF00850 Histone deacetylase domain AC884_RS15865 PF00083 Sugar (and other) transporter AC884_RS15865 PF07690 Major Facilitator Superfamily AC884_RS15875 PF14718 Soluble lytic murein transglycosylase L domain AC884_RS15875 PF01464 Transglycosylase SLT domain AC884_RS15880 PF12627 Probable RNA and SrmB- binding site of polymerase A AC884_RS15880 PF01743 Poly A polymerase head domain AC884_RS15890 PF00271 Helicase conserved C-terminal domain AC884_RS15890 PF00270 DEAD/DEAH box helicase AC884_RS15895 PF03167 Uracil DNA glycosylase superfamily AC884_RS15910 PF13091 PLD-like domain AC884_RS15915 PF00005 ABC transporter AC884_RS15915 PF03459 TOBE domain AC884_RS15920 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS15930 PF00561 alpha/beta hydrolase fold AC884_RS15975 PF01810 LysE type translocator AC884_RS15985 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS16000 PF01266 FAD dependent oxidoreductase AC884_RS16030 PF00440 Bacterial regulatory proteins, tetR family AC884_RS16030 PF17938 Tetracyclin repressor-like, C-terminal domain AC884_RS16040 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS16050 PF00072 Response regulator receiver domain AC884_RS16050 PF00486 Transcriptional regulatory protein, C terminal AC884_RS16060 PF12951 Passenger-associated-transport-repeat AC884_RS16080 PF13361 UvrD-like helicase C-terminal domain AC884_RS16080 PF00580 UvrD/REP helicase N-terminal domain AC884_RS16115 PF13175 AAA ATPase domain AC884_RS16120 PF01555 DNA methylase AC884_RS16140 PF00589 Phage integrase family AC884_RS16140 PF13356 Arm DNA-binding domain AC884_RS16145 PF06071 Protein of unknown function (DUF933) AC884_RS16145 PF01926 50S ribosome-binding GTPase AC884_RS16155 PF01195 Peptidyl-tRNA hydrolase AC884_RS16160 PF14693 Ribosomal protein TL5, C-terminal domain AC884_RS16160 PF01386 Ribosomal L25p family AC884_RS16165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AC884_RS16165 PF14572 Phosphoribosyl synthetase-associated domain AC884_RS16175 PF08544 GHMP kinases C terminal AC884_RS16175 PF00288 GHMP kinases N terminal domain AC884_RS16180 PF03550 Outer membrane lipoprotein LolB AC884_RS16190 PF06827 Zinc finger found in FPG and IleRS AC884_RS16190 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AC884_RS16190 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AC884_RS16200 PF01494 FAD binding domain AC884_RS16210 PF03466 LysR substrate binding domain AC884_RS16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS16215 PF04209 homogentisate 1,2-dioxygenase AC884_RS16225 PF00884 Sulfatase AC884_RS16230 PF08521 Two-component sensor kinase N-terminal AC884_RS16230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS16230 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS16235 PF00072 Response regulator receiver domain AC884_RS16235 PF00486 Transcriptional regulatory protein, C terminal AC884_RS16240 PF02913 FAD linked oxidases, C-terminal domain AC884_RS16240 PF01565 FAD binding domain AC884_RS16250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC884_RS16250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC884_RS16250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC884_RS16250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC884_RS16255 PF00342 Phosphoglucose isomerase AC884_RS16260 PF13477 Glycosyl transferase 4-like AC884_RS16260 PF00534 Glycosyl transferases group 1 AC884_RS16265 PF00534 Glycosyl transferases group 1 AC884_RS16265 PF13439 Glycosyltransferase Family 4 AC884_RS16270 PF13439 Glycosyltransferase Family 4 AC884_RS16270 PF00534 Glycosyl transferases group 1 AC884_RS16275 PF13537 Glutamine amidotransferase domain AC884_RS16275 PF00733 Asparagine synthase AC884_RS16280 PF13439 Glycosyltransferase Family 4 AC884_RS16280 PF00534 Glycosyl transferases group 1 AC884_RS16285 PF03023 Lipid II flippase MurJ AC884_RS16290 PF01370 NAD dependent epimerase/dehydratase family AC884_RS16295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC884_RS16295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC884_RS16295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC884_RS16300 PF00953 Glycosyl transferase family 4 AC884_RS16305 PF03232 Ubiquinone biosynthesis protein COQ7 AC884_RS16315 PF00303 Thymidylate synthase AC884_RS16320 PF00186 Dihydrofolate reductase AC884_RS16325 PF00155 Aminotransferase class I and II AC884_RS16325 PF00392 Bacterial regulatory proteins, gntR family AC884_RS16330 PF00202 Aminotransferase class-III AC884_RS16340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS16345 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS16350 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS16360 PF07364 Metallopeptidase family M81 AC884_RS16360 PF07171 MlrC C-terminus AC884_RS16370 PF02492 CobW/HypB/UreG, nucleotide-binding domain AC884_RS16375 PF01730 UreF AC884_RS16380 PF02814 UreE urease accessory protein, N-terminal domain AC884_RS16380 PF05194 UreE urease accessory protein, C-terminal domain AC884_RS16385 PF01979 Amidohydrolase family AC884_RS16385 PF00449 Urease alpha-subunit, N-terminal domain AC884_RS16390 PF00699 Urease beta subunit AC884_RS16395 PF04955 HupE / UreJ protein AC884_RS16400 PF00547 Urease, gamma subunit AC884_RS16405 PF01774 UreD urease accessory protein AC884_RS16410 PF00376 MerR family regulatory protein AC884_RS16410 PF09278 MerR, DNA binding AC884_RS16415 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS16430 PF07702 UTRA domain AC884_RS16430 PF00392 Bacterial regulatory proteins, gntR family AC884_RS16435 PF05034 Methylaspartate ammonia-lyase N-terminus AC884_RS16435 PF07476 Methylaspartate ammonia-lyase C-terminus AC884_RS16440 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS16455 PF04293 SpoVR like protein AC884_RS16460 PF04285 Protein of unknown function (DUF444) AC884_RS16480 PF02515 CoA-transferase family III AC884_RS16485 PF00501 AMP-binding enzyme AC884_RS16485 PF14535 AMP-binding enzyme C-terminal domain AC884_RS16490 PF08361 MAATS-type transcriptional repressor, C-terminal region AC884_RS16490 PF00440 Bacterial regulatory proteins, tetR family AC884_RS16495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS16495 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS16495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS16505 PF02653 Branched-chain amino acid transport system / permease component AC884_RS16510 PF00005 ABC transporter AC884_RS16515 PF00005 ABC transporter AC884_RS16515 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS16525 PF00106 short chain dehydrogenase AC884_RS16530 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS16540 PF00108 Thiolase, N-terminal domain AC884_RS16540 PF02803 Thiolase, C-terminal domain AC884_RS16545 PF01575 MaoC like domain AC884_RS16590 PF05199 GMC oxidoreductase AC884_RS16590 PF00732 GMC oxidoreductase AC884_RS16600 PF00075 RNase H AC884_RS16605 PF08241 Methyltransferase domain AC884_RS16610 PF00753 Metallo-beta-lactamase superfamily AC884_RS16610 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC884_RS16615 PF01464 Transglycosylase SLT domain AC884_RS16615 PF01476 LysM domain AC884_RS16635 PF04391 Protein of unknown function (DUF533) AC884_RS16640 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS16655 PF00486 Transcriptional regulatory protein, C terminal AC884_RS16655 PF00072 Response regulator receiver domain AC884_RS16660 PF02702 Osmosensitive K+ channel His kinase sensor domain AC884_RS16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS16660 PF13493 Domain of unknown function (DUF4118) AC884_RS16670 PF01654 Cytochrome bd terminal oxidase subunit I AC884_RS16675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AC884_RS16675 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC884_RS16680 PF05209 Septum formation inhibitor MinC, N-terminal domain AC884_RS16680 PF03775 Septum formation inhibitor MinC, C-terminal domain AC884_RS16685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC884_RS16690 PF03776 Septum formation topological specificity factor MinE AC884_RS16710 PF12848 ABC transporter AC884_RS16710 PF00005 ABC transporter AC884_RS16725 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS16730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS16735 PF00535 Glycosyl transferase family 2 AC884_RS16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS16740 PF03466 LysR substrate binding domain AC884_RS16750 PF17755 UvrA DNA-binding domain AC884_RS16750 PF00005 ABC transporter AC884_RS16750 PF17760 UvrA interaction domain AC884_RS16755 PF04715 Anthranilate synthase component I, N terminal region AC884_RS16755 PF00425 chorismate binding enzyme AC884_RS16760 PF01063 Amino-transferase class IV AC884_RS16775 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS16780 PF00501 AMP-binding enzyme AC884_RS16780 PF13193 AMP-binding enzyme C-terminal domain AC884_RS16785 PF00392 Bacterial regulatory proteins, gntR family AC884_RS16785 PF07702 UTRA domain AC884_RS16790 PF00899 ThiF family AC884_RS16795 PF07690 Major Facilitator Superfamily AC884_RS16805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AC884_RS16805 PF01243 Pyridoxamine 5'-phosphate oxidase AC884_RS16810 PF01613 Flavin reductase like domain AC884_RS16820 PF00551 Formyl transferase AC884_RS16825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS16825 PF03466 LysR substrate binding domain AC884_RS16830 PF18158 Adaptive response protein AidB N-terminal domain AC884_RS16830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS16830 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS16850 PF00218 Indole-3-glycerol phosphate synthase AC884_RS16855 PF02885 Glycosyl transferase family, helical bundle domain AC884_RS16855 PF00591 Glycosyl transferase family, a/b domain AC884_RS16860 PF00117 Glutamine amidotransferase class-I AC884_RS16865 PF00425 chorismate binding enzyme AC884_RS16865 PF04715 Anthranilate synthase component I, N terminal region AC884_RS16870 PF13419 Haloacid dehalogenase-like hydrolase AC884_RS16875 PF00834 Ribulose-phosphate 3 epimerase family AC884_RS16880 PF04379 ApaG domain AC884_RS16885 PF03562 MltA specific insert domain AC884_RS16885 PF06725 3D domain AC884_RS16890 PF01494 FAD binding domain AC884_RS16895 PF13098 Thioredoxin-like domain AC884_RS16895 PF10411 Disulfide bond isomerase protein N-terminus AC884_RS16900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC884_RS16900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC884_RS16900 PF01842 ACT domain AC884_RS16910 PF01171 PP-loop family AC884_RS16920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS16920 PF13192 Thioredoxin domain AC884_RS16925 PF13180 PDZ domain AC884_RS16925 PF17820 PDZ domain AC884_RS16930 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS16955 PF00119 ATP synthase A chain AC884_RS16960 PF00137 ATP synthase subunit C AC884_RS16965 PF00430 ATP synthase B/B' CF(0) AC884_RS16970 PF00213 ATP synthase delta (OSCP) subunit AC884_RS16975 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC884_RS16975 PF00306 ATP synthase alpha/beta chain, C terminal domain AC884_RS16975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC884_RS16980 PF00231 ATP synthase AC884_RS16985 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC884_RS16985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC884_RS16990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AC884_RS17000 PF01208 Uroporphyrinogen decarboxylase (URO-D) AC884_RS17005 PF17764 3′ DNA-binding domain (3′BD) AC884_RS17005 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AC884_RS17005 PF18074 Primosomal protein N C-terminal domain AC884_RS17005 PF00271 Helicase conserved C-terminal domain AC884_RS17005 PF00270 DEAD/DEAH box helicase AC884_RS17010 PF00580 UvrD/REP helicase N-terminal domain AC884_RS17010 PF13361 UvrD-like helicase C-terminal domain AC884_RS17020 PF07687 Peptidase dimerisation domain AC884_RS17020 PF01546 Peptidase family M20/M25/M40 AC884_RS17030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS17030 PF00005 ABC transporter AC884_RS17035 PF12911 N-terminal TM domain of oligopeptide transport permease C AC884_RS17035 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS17040 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS17060 PF01256 Carbohydrate kinase AC884_RS17065 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS17070 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS17085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS17085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS17085 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS17090 PF02515 CoA-transferase family III AC884_RS17095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC884_RS17095 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AC884_RS17095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC884_RS17125 PF00394 Multicopper oxidase AC884_RS17125 PF07732 Multicopper oxidase AC884_RS17125 PF07731 Multicopper oxidase AC884_RS17130 PF05275 Copper resistance protein B precursor (CopB) AC884_RS17135 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS17135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC884_RS17135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC884_RS17140 PF02515 CoA-transferase family III AC884_RS17145 PF01614 Bacterial transcriptional regulator AC884_RS17145 PF09339 IclR helix-turn-helix domain AC884_RS17150 PF05995 Cysteine dioxygenase type I AC884_RS17155 PF01425 Amidase AC884_RS17160 PF13458 Periplasmic binding protein AC884_RS17185 PF13091 PLD-like domain AC884_RS17190 PF03372 Endonuclease/Exonuclease/phosphatase family AC884_RS17195 PF02938 GAD domain AC884_RS17195 PF00152 tRNA synthetases class II (D, K and N) AC884_RS17195 PF01336 OB-fold nucleic acid binding domain AC884_RS17215 PF05199 GMC oxidoreductase AC884_RS17215 PF00732 GMC oxidoreductase AC884_RS17225 PF00593 TonB dependent receptor AC884_RS17225 PF07715 TonB-dependent Receptor Plug Domain AC884_RS17230 PF01370 NAD dependent epimerase/dehydratase family AC884_RS17230 PF02222 ATP-grasp domain AC884_RS17235 PF00571 CBS domain AC884_RS17235 PF01380 SIS domain AC884_RS17255 PF00005 ABC transporter AC884_RS17260 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AC884_RS17265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AC884_RS17270 PF07475 HPr Serine kinase C-terminal domain AC884_RS17270 PF02603 HPr Serine kinase N terminus AC884_RS17275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC884_RS17275 PF00034 Cytochrome c AC884_RS17275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC884_RS17285 PF03668 P-loop ATPase protein family AC884_RS17290 PF03330 Lytic transglycolase AC884_RS17290 PF05036 Sporulation related domain AC884_RS17310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC884_RS17310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC884_RS17315 PF03450 CO dehydrogenase flavoprotein C-terminal domain AC884_RS17315 PF00941 FAD binding domain in molybdopterin dehydrogenase AC884_RS17320 PF09084 NMT1/THI5 like AC884_RS17325 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17330 PF02441 Flavoprotein AC884_RS17335 PF00462 Glutaredoxin AC884_RS17340 PF05175 Methyltransferase small domain AC884_RS17340 PF17827 PrmC N-terminal domain AC884_RS17345 PF00472 RF-1 domain AC884_RS17345 PF03462 PCRF domain AC884_RS17350 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AC884_RS17350 PF01488 Shikimate / quinate 5-dehydrogenase AC884_RS17350 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AC884_RS17365 PF00384 Molybdopterin oxidoreductase AC884_RS17365 PF01568 Molydopterin dinucleotide binding domain AC884_RS17380 PF00583 Acetyltransferase (GNAT) family AC884_RS17380 PF13607 Succinyl-CoA ligase like flavodoxin domain AC884_RS17380 PF13380 CoA binding domain AC884_RS17385 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS17390 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS17390 PF12806 Acetyl-CoA dehydrogenase C-terminal like AC884_RS17390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS17395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC884_RS17395 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS17395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC884_RS17400 PF00108 Thiolase, N-terminal domain AC884_RS17400 PF02803 Thiolase, C-terminal domain AC884_RS17405 PF01037 Lrp/AsnC ligand binding domain AC884_RS17410 PF01380 SIS domain AC884_RS17415 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AC884_RS17420 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17430 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS17435 PF13380 CoA binding domain AC884_RS17435 PF13607 Succinyl-CoA ligase like flavodoxin domain AC884_RS17440 PF03466 LysR substrate binding domain AC884_RS17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS17445 PF08240 Alcohol dehydrogenase GroES-like domain AC884_RS17445 PF00107 Zinc-binding dehydrogenase AC884_RS17455 PF01042 Endoribonuclease L-PSP AC884_RS17465 PF01546 Peptidase family M20/M25/M40 AC884_RS17465 PF07687 Peptidase dimerisation domain AC884_RS17470 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS17475 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS17475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS17480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS17480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS17480 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS17485 PF09330 D-lactate dehydrogenase, membrane binding AC884_RS17485 PF01565 FAD binding domain AC884_RS17490 PF03466 LysR substrate binding domain AC884_RS17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS17495 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17520 PF00701 Dihydrodipicolinate synthetase family AC884_RS17525 PF03466 LysR substrate binding domain AC884_RS17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS17530 PF02515 CoA-transferase family III AC884_RS17535 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS17540 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS17540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS17545 PF01575 MaoC like domain AC884_RS17560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC884_RS17560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC884_RS17565 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS17570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS17570 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS17570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS17575 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17580 PF13380 CoA binding domain AC884_RS17580 PF13607 Succinyl-CoA ligase like flavodoxin domain AC884_RS17590 PF00676 Dehydrogenase E1 component AC884_RS17595 PF02779 Transketolase, pyrimidine binding domain AC884_RS17595 PF02780 Transketolase, C-terminal domain AC884_RS17600 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS17605 PF00364 Biotin-requiring enzyme AC884_RS17605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC884_RS17605 PF02817 e3 binding domain AC884_RS17610 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS17610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS17610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS17615 PF13193 AMP-binding enzyme C-terminal domain AC884_RS17615 PF00501 AMP-binding enzyme AC884_RS17625 PF13458 Periplasmic binding protein AC884_RS17630 PF02653 Branched-chain amino acid transport system / permease component AC884_RS17635 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC884_RS17635 PF00005 ABC transporter AC884_RS17640 PF00005 ABC transporter AC884_RS17645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS17645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC884_RS17660 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17675 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17690 PF00899 ThiF family AC884_RS17695 PF03572 Peptidase family S41 AC884_RS17695 PF13180 PDZ domain AC884_RS17700 PF01551 Peptidase family M23 AC884_RS17705 PF00300 Histidine phosphatase superfamily (branch 1) AC884_RS17710 PF17773 UPF0176 acylphosphatase like domain AC884_RS17710 PF12368 Rhodanase C-terminal AC884_RS17710 PF00581 Rhodanese-like domain AC884_RS17715 PF00462 Glutaredoxin AC884_RS17720 PF02556 Preprotein translocase subunit SecB AC884_RS17725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AC884_RS17725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AC884_RS17730 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17735 PF00588 SpoU rRNA Methylase family AC884_RS17745 PF08241 Methyltransferase domain AC884_RS17750 PF04107 Glutamate-cysteine ligase family 2(GCS2) AC884_RS17755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC884_RS17765 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS17770 PF00005 ABC transporter AC884_RS17780 PF01799 [2Fe-2S] binding domain AC884_RS17780 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS17785 PF03450 CO dehydrogenase flavoprotein C-terminal domain AC884_RS17785 PF00941 FAD binding domain in molybdopterin dehydrogenase AC884_RS17790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC884_RS17790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC884_RS17795 PF03480 Bacterial extracellular solute-binding protein, family 7 AC884_RS17800 PF00355 Rieske [2Fe-2S] domain AC884_RS17805 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS17805 PF14759 Reductase C-terminal AC884_RS17810 PF00355 Rieske [2Fe-2S] domain AC884_RS17810 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AC884_RS17820 PF00857 Isochorismatase family AC884_RS17830 PF00561 alpha/beta hydrolase fold AC884_RS17835 PF17645 Arylmalonate decarboxylase AC884_RS17845 PF12804 MobA-like NTP transferase domain AC884_RS17855 PF01047 MarR family AC884_RS17860 PF02386 Cation transport protein AC884_RS17865 PF02254 TrkA-N domain AC884_RS17865 PF02080 TrkA-C domain AC884_RS17870 PF02954 Bacterial regulatory protein, Fis family AC884_RS17870 PF00158 Sigma-54 interaction domain AC884_RS17870 PF00072 Response regulator receiver domain AC884_RS17875 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS17875 PF00672 HAMP domain AC884_RS17875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS17875 PF00989 PAS fold AC884_RS17885 PF01029 NusB family AC884_RS17885 PF01189 16S rRNA methyltransferase RsmB/F AC884_RS17895 PF01958 Domain of unknown function DUF108 AC884_RS17895 PF03447 Homoserine dehydrogenase, NAD binding domain AC884_RS17920 PF01810 LysE type translocator AC884_RS17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS17925 PF03466 LysR substrate binding domain AC884_RS17935 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS17940 PF01168 Alanine racemase, N-terminal domain AC884_RS17945 PF00155 Aminotransferase class I and II AC884_RS17950 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS17960 PF00682 HMGL-like AC884_RS17965 PF17782 DprA winged helix domain AC884_RS17965 PF02481 DNA recombination-mediator protein A AC884_RS17970 PF01037 Lrp/AsnC ligand binding domain AC884_RS17975 PF00266 Aminotransferase class-V AC884_RS17980 PF01327 Polypeptide deformylase AC884_RS17995 PF00551 Formyl transferase AC884_RS17995 PF02911 Formyl transferase, C-terminal domain AC884_RS18005 PF13419 Haloacid dehalogenase-like hydrolase AC884_RS18015 PF03641 Possible lysine decarboxylase AC884_RS18025 PF04055 Radical SAM superfamily AC884_RS18025 PF00919 Uncharacterized protein family UPF0004 AC884_RS18025 PF18693 TRAM domain AC884_RS18030 PF01361 Tautomerase enzyme AC884_RS18035 PF01266 FAD dependent oxidoreductase AC884_RS18040 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS18045 PF00392 Bacterial regulatory proteins, gntR family AC884_RS18045 PF07729 FCD domain AC884_RS18055 PF00202 Aminotransferase class-III AC884_RS18060 PF00491 Arginase family AC884_RS18070 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS18075 PF02627 Carboxymuconolactone decarboxylase family AC884_RS18080 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS18085 PF09339 IclR helix-turn-helix domain AC884_RS18085 PF01614 Bacterial transcriptional regulator AC884_RS18090 PF00501 AMP-binding enzyme AC884_RS18090 PF13193 AMP-binding enzyme C-terminal domain AC884_RS18095 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS18105 PF12951 Passenger-associated-transport-repeat AC884_RS18105 PF12951 Passenger-associated-transport-repeat AC884_RS18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS18125 PF03466 LysR substrate binding domain AC884_RS18135 PF01168 Alanine racemase, N-terminal domain AC884_RS18135 PF14031 Putative serine dehydratase domain AC884_RS18140 PF07411 Domain of unknown function (DUF1508) AC884_RS18145 PF01145 SPFH domain / Band 7 family AC884_RS18155 PF01042 Endoribonuclease L-PSP AC884_RS18200 PF03837 RecT family AC884_RS18235 PF00589 Phage integrase family AC884_RS18240 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS18240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS18255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS18255 PF03466 LysR substrate binding domain AC884_RS18260 PF02525 Flavodoxin-like fold AC884_RS18270 PF02096 60Kd inner membrane protein AC884_RS18270 PF14849 YidC periplasmic domain AC884_RS18275 PF01809 Putative membrane protein insertion efficiency factor AC884_RS18280 PF00825 Ribonuclease P AC884_RS18285 PF00468 Ribosomal protein L34 AC884_RS18290 PF00308 Bacterial dnaA protein AC884_RS18290 PF08299 Bacterial dnaA protein helix-turn-helix AC884_RS18290 PF11638 DnaA N-terminal domain AC884_RS18295 PF00712 DNA polymerase III beta subunit, N-terminal domain AC884_RS18295 PF02768 DNA polymerase III beta subunit, C-terminal domain AC884_RS18295 PF02767 DNA polymerase III beta subunit, central domain AC884_RS18300 PF00204 DNA gyrase B AC884_RS18300 PF00986 DNA gyrase B subunit, carboxyl terminus AC884_RS18300 PF18053 DNA gyrase B subunit insert domain AC884_RS18300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS18300 PF01751 Toprim domain AC884_RS18305 PF01614 Bacterial transcriptional regulator AC884_RS18305 PF09339 IclR helix-turn-helix domain AC884_RS18310 PF01425 Amidase AC884_RS18315 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS18320 PF00708 Acylphosphatase AC884_RS18325 PF01070 FMN-dependent dehydrogenase AC884_RS18345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS18345 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS18345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS18350 PF00376 MerR family regulatory protein AC884_RS18350 PF09278 MerR, DNA binding AC884_RS18365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC884_RS18365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC884_RS18365 PF02770 Acyl-CoA dehydrogenase, middle domain AC884_RS18380 PF01039 Carboxyl transferase domain AC884_RS18385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC884_RS18385 PF00364 Biotin-requiring enzyme AC884_RS18385 PF00289 Biotin carboxylase, N-terminal domain AC884_RS18385 PF02785 Biotin carboxylase C-terminal domain AC884_RS18395 PF00202 Aminotransferase class-III AC884_RS18400 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS18405 PF14031 Putative serine dehydratase domain AC884_RS18405 PF01168 Alanine racemase, N-terminal domain AC884_RS18410 PF16868 NMT1-like family AC884_RS18420 PF00593 TonB dependent receptor AC884_RS18420 PF07715 TonB-dependent Receptor Plug Domain AC884_RS18425 PF04361 Protein of unknown function (DUF494) AC884_RS18440 PF01751 Toprim domain AC884_RS18440 PF01131 DNA topoisomerase AC884_RS18450 PF00005 ABC transporter AC884_RS18455 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS18465 PF00171 Aldehyde dehydrogenase family AC884_RS18475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC884_RS18475 PF00205 Thiamine pyrophosphate enzyme, central domain AC884_RS18475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC884_RS18480 PF01037 Lrp/AsnC ligand binding domain AC884_RS18485 PF01062 Bestrophin, RFP-TM, chloride channel AC884_RS18495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AC884_RS18510 PF02965 Vitamin B12 dependent methionine synthase, activation domain AC884_RS18510 PF02310 B12 binding domain AC884_RS18510 PF00809 Pterin binding enzyme AC884_RS18510 PF02607 B12 binding domain AC884_RS18510 PF02574 Homocysteine S-methyltransferase AC884_RS18515 PF07715 TonB-dependent Receptor Plug Domain AC884_RS18515 PF00593 TonB dependent receptor AC884_RS18520 PF01497 Periplasmic binding protein AC884_RS18525 PF05690 Thiazole biosynthesis protein ThiG AC884_RS18530 PF08543 Phosphomethylpyrimidine kinase AC884_RS18545 PF02321 Outer membrane efflux protein AC884_RS18550 PF01467 Cytidylyltransferase-like AC884_RS18560 PF01594 AI-2E family transporter AC884_RS18570 PF02254 TrkA-N domain AC884_RS18570 PF07885 Ion channel AC884_RS18580 PF00164 Ribosomal protein S12/S23 AC884_RS18585 PF00177 Ribosomal protein S7p/S5e AC884_RS18590 PF00679 Elongation factor G C-terminus AC884_RS18590 PF00009 Elongation factor Tu GTP binding domain AC884_RS18590 PF03144 Elongation factor Tu domain 2 AC884_RS18590 PF14492 Elongation Factor G, domain II AC884_RS18590 PF03764 Elongation factor G, domain IV AC884_RS18595 PF00009 Elongation factor Tu GTP binding domain AC884_RS18595 PF03144 Elongation factor Tu domain 2 AC884_RS18595 PF03143 Elongation factor Tu C-terminal domain AC884_RS18600 PF00338 Ribosomal protein S10p/S20e AC884_RS18605 PF00297 Ribosomal protein L3 AC884_RS18610 PF00573 Ribosomal protein L4/L1 family AC884_RS18615 PF00276 Ribosomal protein L23 AC884_RS18620 PF00181 Ribosomal Proteins L2, RNA binding domain AC884_RS18620 PF03947 Ribosomal Proteins L2, C-terminal domain AC884_RS18625 PF00203 Ribosomal protein S19 AC884_RS18630 PF00237 Ribosomal protein L22p/L17e AC884_RS18635 PF00189 Ribosomal protein S3, C-terminal domain AC884_RS18635 PF07650 KH domain AC884_RS18640 PF00252 Ribosomal protein L16p/L10e AC884_RS18645 PF00831 Ribosomal L29 protein AC884_RS18650 PF00366 Ribosomal protein S17 AC884_RS18660 PF00171 Aldehyde dehydrogenase family AC884_RS18670 PF00238 Ribosomal protein L14p/L23e AC884_RS18675 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AC884_RS18680 PF00281 Ribosomal protein L5 AC884_RS18680 PF00673 ribosomal L5P family C-terminus AC884_RS18685 PF00253 Ribosomal protein S14p/S29e AC884_RS18690 PF00410 Ribosomal protein S8 AC884_RS18695 PF00347 Ribosomal protein L6 AC884_RS18700 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AC884_RS18705 PF00333 Ribosomal protein S5, N-terminal domain AC884_RS18705 PF03719 Ribosomal protein S5, C-terminal domain AC884_RS18710 PF00327 Ribosomal protein L30p/L7e AC884_RS18715 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AC884_RS18720 PF00344 SecY translocase AC884_RS18725 PF01176 Translation initiation factor 1A / IF-1 AC884_RS18730 PF00444 Ribosomal protein L36 AC884_RS18735 PF00416 Ribosomal protein S13/S18 AC884_RS18740 PF00411 Ribosomal protein S11 AC884_RS18745 PF00163 Ribosomal protein S4/S9 N-terminal domain AC884_RS18745 PF01479 S4 domain AC884_RS18750 PF01000 RNA polymerase Rpb3/RpoA insert domain AC884_RS18750 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AC884_RS18750 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AC884_RS18755 PF01196 Ribosomal protein L17 AC884_RS18760 PF01230 HIT domain AC884_RS18765 PF03091 CutA1 divalent ion tolerance protein AC884_RS18770 PF02683 Cytochrome C biogenesis protein transmembrane region AC884_RS18770 PF11412 Disulphide bond corrector protein DsbC AC884_RS18775 PF00892 EamA-like transporter family AC884_RS18780 PF00490 Delta-aminolevulinic acid dehydratase AC884_RS18785 PF01926 50S ribosome-binding GTPase AC884_RS18790 PF00034 Cytochrome c AC884_RS18795 PF05140 ResB-like family AC884_RS18800 PF01578 Cytochrome C assembly protein AC884_RS18805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AC884_RS18805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC884_RS18810 PF13627 Prokaryotic lipoprotein-attachment site AC884_RS18815 PF01491 Frataxin-like domain AC884_RS18820 PF00905 Penicillin binding protein transpeptidase domain AC884_RS18820 PF00912 Transglycosylase AC884_RS18820 PF17092 Penicillin-binding protein OB-like domain AC884_RS18825 PF01202 Shikimate kinase AC884_RS18830 PF01761 3-dehydroquinate synthase AC884_RS18835 PF13286 Phosphohydrolase-associated domain AC884_RS18835 PF01966 HD domain AC884_RS18840 PF13417 Glutathione S-transferase, N-terminal domain AC884_RS18840 PF00043 Glutathione S-transferase, C-terminal domain AC884_RS18845 PF17755 UvrA DNA-binding domain AC884_RS18845 PF17760 UvrA interaction domain AC884_RS18850 PF07690 Major Facilitator Superfamily AC884_RS18855 PF00436 Single-strand binding protein family AC884_RS18860 PF00593 TonB dependent receptor AC884_RS18860 PF07715 TonB-dependent Receptor Plug Domain AC884_RS18870 PF03328 HpcH/HpaI aldolase/citrate lyase family AC884_RS18880 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS18890 PF03466 LysR substrate binding domain AC884_RS18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS18895 PF01979 Amidohydrolase family AC884_RS18900 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS18905 PF00534 Glycosyl transferases group 1 AC884_RS18905 PF13439 Glycosyltransferase Family 4 AC884_RS18915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS18915 PF03466 LysR substrate binding domain AC884_RS18925 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS18930 PF00005 ABC transporter AC884_RS18950 PF01274 Malate synthase AC884_RS18955 PF00392 Bacterial regulatory proteins, gntR family AC884_RS18955 PF07729 FCD domain AC884_RS18970 PF01040 UbiA prenyltransferase family AC884_RS18975 PF00155 Aminotransferase class I and II AC884_RS18980 PF13185 GAF domain AC884_RS18985 PF00701 Dihydrodipicolinate synthetase family AC884_RS19000 PF01476 LysM domain AC884_RS19000 PF04972 BON domain AC884_RS19005 PF02597 ThiS family AC884_RS19005 PF05690 Thiazole biosynthesis protein ThiG AC884_RS19010 PF00561 alpha/beta hydrolase fold AC884_RS19015 PF02390 Putative methyltransferase AC884_RS19030 PF00682 HMGL-like AC884_RS19035 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS19055 PF07702 UTRA domain AC884_RS19055 PF00392 Bacterial regulatory proteins, gntR family AC884_RS19060 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS19070 PF07702 UTRA domain AC884_RS19070 PF00392 Bacterial regulatory proteins, gntR family AC884_RS19075 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS19085 PF00005 ABC transporter AC884_RS19090 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS19095 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS19100 PF02801 Beta-ketoacyl synthase, C-terminal domain AC884_RS19100 PF00109 Beta-ketoacyl synthase, N-terminal domain AC884_RS19100 PF14765 Polyketide synthase dehydratase AC884_RS19100 PF16197 Ketoacyl-synthetase C-terminal extension AC884_RS19100 PF08990 Erythronolide synthase docking AC884_RS19100 PF00698 Acyl transferase domain AC884_RS19100 PF08659 KR domain AC884_RS19100 PF00550 Phosphopantetheine attachment site AC884_RS19100 PF08240 Alcohol dehydrogenase GroES-like domain AC884_RS19105 PF02515 CoA-transferase family III AC884_RS19110 PF00440 Bacterial regulatory proteins, tetR family AC884_RS19115 PF00293 NUDIX domain AC884_RS19115 PF09297 NADH pyrophosphatase zinc ribbon domain AC884_RS19120 PF00970 Oxidoreductase FAD-binding domain AC884_RS19120 PF00111 2Fe-2S iron-sulfur cluster binding domain AC884_RS19120 PF00175 Oxidoreductase NAD-binding domain AC884_RS19125 PF01425 Amidase AC884_RS19135 PF03466 LysR substrate binding domain AC884_RS19135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC884_RS19140 PF13458 Periplasmic binding protein AC884_RS19150 PF00005 ABC transporter AC884_RS19160 PF02653 Branched-chain amino acid transport system / permease component AC884_RS19170 PF00355 Rieske [2Fe-2S] domain AC884_RS19185 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AC884_RS19185 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AC884_RS19200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC884_RS19200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC884_RS19200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC884_RS19205 PF07690 Major Facilitator Superfamily AC884_RS19210 PF12804 MobA-like NTP transferase domain AC884_RS19210 PF14602 Hexapeptide repeat of succinyl-transferase AC884_RS19210 PF00132 Bacterial transferase hexapeptide (six repeats) AC884_RS19230 PF02630 SCO1/SenC AC884_RS19235 PF01040 UbiA prenyltransferase family AC884_RS19240 PF02628 Cytochrome oxidase assembly protein AC884_RS19260 PF00510 Cytochrome c oxidase subunit III AC884_RS19275 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC884_RS19280 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC884_RS19280 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AC884_RS19290 PF00999 Sodium/hydrogen exchanger family AC884_RS19295 PF00149 Calcineurin-like phosphoesterase AC884_RS19300 PF04542 Sigma-70 region 2 AC884_RS19300 PF00140 Sigma-70 factor, region 1.2 AC884_RS19300 PF04545 Sigma-70, region 4 AC884_RS19310 PF00756 Putative esterase AC884_RS19315 PF00107 Zinc-binding dehydrogenase AC884_RS19315 PF08240 Alcohol dehydrogenase GroES-like domain AC884_RS19325 PF01493 GXGXG motif AC884_RS19325 PF01645 Conserved region in glutamate synthase AC884_RS19325 PF04898 Glutamate synthase central domain AC884_RS19325 PF00310 Glutamine amidotransferases class-II AC884_RS19330 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC884_RS19330 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AC884_RS19335 PF03922 OmpW family AC884_RS19340 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS19345 PF00005 ABC transporter AC884_RS19350 PF02405 Permease MlaE AC884_RS19355 PF02470 MlaD protein AC884_RS19360 PF04333 MlaA lipoprotein AC884_RS19370 PF00005 ABC transporter AC884_RS19375 PF01061 ABC-2 type transporter AC884_RS19385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC884_RS19390 PF01634 ATP phosphoribosyltransferase AC884_RS19395 PF00815 Histidinol dehydrogenase AC884_RS19400 PF00155 Aminotransferase class I and II AC884_RS19405 PF00475 Imidazoleglycerol-phosphate dehydratase AC884_RS19410 PF00117 Glutamine amidotransferase class-I AC884_RS19415 PF00977 Histidine biosynthesis protein AC884_RS19420 PF00977 Histidine biosynthesis protein AC884_RS19425 PF01502 Phosphoribosyl-AMP cyclohydrolase AC884_RS19430 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AC884_RS19435 PF01230 HIT domain AC884_RS19440 PF02416 mttA/Hcf106 family AC884_RS19445 PF02416 mttA/Hcf106 family AC884_RS19450 PF00902 Sec-independent protein translocase protein (TatC) AC884_RS19460 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS19465 PF02917 Pertussis toxin, subunit 1 AC884_RS19470 PF03440 Aerolysin/Pertussis toxin (APT) domain AC884_RS19470 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AC884_RS19475 PF09275 Pertussis toxin S4 subunit AC884_RS19480 PF09276 Pertussis toxin S5 subunit AC884_RS19485 PF03440 Aerolysin/Pertussis toxin (APT) domain AC884_RS19485 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain AC884_RS19490 PF04956 TrbC/VIRB2 family AC884_RS19495 PF05101 Type IV secretory pathway, VirB3-like protein AC884_RS19500 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AC884_RS19505 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AC884_RS19515 PF04335 VirB8 protein AC884_RS19520 PF03524 Conjugal transfer protein AC884_RS19525 PF03743 Bacterial conjugation TrbI-like protein AC884_RS19530 PF00437 Type II/IV secretion system protein AC884_RS19540 PF00892 EamA-like transporter family AC884_RS19560 PF12631 MnmE helical domain AC884_RS19560 PF10396 GTP-binding protein TrmE N-terminus AC884_RS19560 PF01926 50S ribosome-binding GTPase AC884_RS19565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS19570 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS19575 PF12911 N-terminal TM domain of oligopeptide transport permease C AC884_RS19575 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS19580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS19580 PF00005 ABC transporter AC884_RS19590 PF01960 ArgJ family AC884_RS19600 PF00293 NUDIX domain AC884_RS19615 PF02321 Outer membrane efflux protein AC884_RS19620 PF00873 AcrB/AcrD/AcrF family AC884_RS19625 PF00873 AcrB/AcrD/AcrF family AC884_RS19630 PF13533 Biotin-lipoyl like AC884_RS19635 PF07072 Cell division protein AC884_RS19640 PF01121 Dephospho-CoA kinase AC884_RS19645 PF06750 Bacterial Peptidase A24 N-terminal domain AC884_RS19645 PF01478 Type IV leader peptidase family AC884_RS19660 PF02569 Pantoate-beta-alanine ligase AC884_RS19665 PF02616 Segregation and condensation protein ScpA AC884_RS19675 PF07690 Major Facilitator Superfamily AC884_RS19680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AC884_RS19680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AC884_RS19690 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS19695 PF00005 ABC transporter AC884_RS19700 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS19705 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS19710 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC884_RS19715 PF00005 ABC transporter AC884_RS19720 PF18075 FtsX extracellular domain AC884_RS19725 PF03975 CheD chemotactic sensory transduction AC884_RS19735 PF14815 NUDIX domain AC884_RS19735 PF10576 Iron-sulfur binding domain of endonuclease III AC884_RS19735 PF00633 Helix-hairpin-helix motif AC884_RS19735 PF00730 HhH-GPD superfamily base excision DNA repair protein AC884_RS19745 PF08241 Methyltransferase domain AC884_RS19755 PF02515 CoA-transferase family III AC884_RS19760 PF02515 CoA-transferase family III AC884_RS19770 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS19775 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS19780 PF00881 Nitroreductase family AC884_RS19790 PF00682 HMGL-like AC884_RS19795 PF00378 Enoyl-CoA hydratase/isomerase AC884_RS19800 PF02515 CoA-transferase family III AC884_RS19805 PF03401 Tripartite tricarboxylate transporter family receptor AC884_RS19815 PF00199 Catalase AC884_RS19815 PF06628 Catalase-related immune-responsive AC884_RS19820 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS19825 PF00005 ABC transporter AC884_RS19835 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AC884_RS19840 PF01546 Peptidase family M20/M25/M40 AC884_RS19840 PF07687 Peptidase dimerisation domain AC884_RS19845 PF00005 ABC transporter AC884_RS19845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS19850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC884_RS19850 PF00005 ABC transporter AC884_RS19855 PF12911 N-terminal TM domain of oligopeptide transport permease C AC884_RS19855 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS19860 PF00528 Binding-protein-dependent transport system inner membrane component AC884_RS19865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC884_RS19870 PF12631 MnmE helical domain AC884_RS19870 PF10396 GTP-binding protein TrmE N-terminus AC884_RS19870 PF01926 50S ribosome-binding GTPase AC884_RS19880 PF00072 Response regulator receiver domain AC884_RS19880 PF00486 Transcriptional regulatory protein, C terminal AC884_RS19885 PF00512 His Kinase A (phospho-acceptor) domain AC884_RS19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC884_RS19900 PF01970 Tripartite tricarboxylate transporter TctA family AC884_RS19905 PF00155 Aminotransferase class I and II AC884_RS19910 PF00313 'Cold-shock' DNA-binding domain