AC885_RS00005	SM01228	AC885_RS00005
AC885_RS00025	SM00470	ParB-like nuclease domain
AC885_RS00030	SM00870	AC885_RS00030
AC885_RS00070	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AC885_RS00070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AC885_RS00075	SM00649	Ribosomal protein L11/L12
AC885_RS00100	SM00663	RNA polymerase I subunit A N-terminus
AC885_RS00130	SM00448	cheY-homologous receiver domain
AC885_RS00130	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS00200	SM00563	Phosphate acyltransferases
AC885_RS00240	SM00421	helix_turn_helix, Lux Regulon
AC885_RS00290	SM00382	ATPases associated with a variety of cellular activities
AC885_RS00305	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS00400	SM00387	Histidine kinase-like ATPases
AC885_RS00410	SM00644	AC885_RS00410
AC885_RS00425	SM00382	ATPases associated with a variety of cellular activities
AC885_RS00425	SM00962	SRP54-type protein, GTPase domain
AC885_RS00425	SM00963	SRP54-type protein, helical bundle domain
AC885_RS00525	SM00382	ATPases associated with a variety of cellular activities
AC885_RS00545	SM00936	Penicillin-binding protein 5, C-terminal domain 
AC885_RS00565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC885_RS00610	SM00836	DALR anticodon binding domain
AC885_RS00610	SM01016	Arginyl tRNA synthetase N terminal dom
AC885_RS00645	SM00382	ATPases associated with a variety of cellular activities
AC885_RS00660	SM00382	ATPases associated with a variety of cellular activities
AC885_RS00695	SM00917	LeuA allosteric (dimerisation) domain
AC885_RS00750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS00750	SM00895	AC885_RS00750
AC885_RS00780	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS00790	SM00797	Allophanate hydrolase subunit 2
AC885_RS00795	SM00796	Allophanate hydrolase subunit 1
AC885_RS00820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS00820	SM00387	Histidine kinase-like ATPases
AC885_RS00820	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS00825	SM00448	cheY-homologous receiver domain
AC885_RS00825	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS00830	SM00091	PAS domain
AC885_RS00830	SM00387	Histidine kinase-like ATPases
AC885_RS00830	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS00835	SM00448	cheY-homologous receiver domain
AC885_RS00835	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS00845	SM00978	AC885_RS00845
AC885_RS00870	SM00382	ATPases associated with a variety of cellular activities
AC885_RS00885	SM00487	DEAD-like helicases superfamily
AC885_RS00885	SM00490	helicase superfamily c-terminal domain
AC885_RS00930	SM00450	Rhodanese Homology Domain
AC885_RS01025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS01025	SM00895	AC885_RS01025
AC885_RS01075	SM00882	Coenzyme A transferase
AC885_RS01080	SM00882	Coenzyme A transferase
AC885_RS01085	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS01105	SM00869	Autotransporter beta-domain
AC885_RS01140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS01140	SM00895	AC885_RS01140
AC885_RS01210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS01210	SM00895	AC885_RS01210
AC885_RS01250	SM00382	ATPases associated with a variety of cellular activities
AC885_RS01265	SM00853	MutL C terminal dimerisation domain
AC885_RS01265	SM01340	AC885_RS01265
AC885_RS01275	SM00646	AC885_RS01275
AC885_RS01355	SM00382	ATPases associated with a variety of cellular activities
AC885_RS01360	SM00382	ATPases associated with a variety of cellular activities
AC885_RS01445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC885_RS01475	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS01485	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS01535	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC885_RS01560	SM00382	ATPases associated with a variety of cellular activities
AC885_RS01565	SM00382	ATPases associated with a variety of cellular activities
AC885_RS01635	SM00732	Likely ribonuclease with RNase H fold.
AC885_RS01650	SM00563	Phosphate acyltransferases
AC885_RS01700	SM00849	Metallo-beta-lactamase superfamily
AC885_RS01730	SM00267	diguanylate cyclase
AC885_RS01755	SM00382	ATPases associated with a variety of cellular activities
AC885_RS01775	SM00965	Secretin and TonB N terminus short domain
AC885_RS01820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS01820	SM00895	AC885_RS01820
AC885_RS01835	SM01236	AC885_RS01835
AC885_RS01855	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS01880	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC885_RS01895	SM00845	GatB domain
AC885_RS01970	SM00749	bacterial OsmY and nodulation domain
AC885_RS02035	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS02075	SM00450	Rhodanese Homology Domain
AC885_RS02180	SM00479	AC885_RS02180
AC885_RS02210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS02215	SM00838	Elongation factor G C-terminus
AC885_RS02215	SM00889	Elongation factor G, domain IV
AC885_RS02285	SM00357	Cold shock protein domain
AC885_RS02295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS02295	SM00895	AC885_RS02295
AC885_RS02310	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC885_RS02375	SM00363	S4 RNA-binding domain
AC885_RS02380	SM00316	Ribosomal protein S1-like RNA-binding domain
AC885_RS02420	SM00954	Region found in RelA / SpoT proteins
AC885_RS02465	SM00478	endonuclease III
AC885_RS02465	SM00525	AC885_RS02465
AC885_RS02470	SM00382	ATPases associated with a variety of cellular activities
AC885_RS02475	SM00382	ATPases associated with a variety of cellular activities
AC885_RS02505	SM00382	ATPases associated with a variety of cellular activities
AC885_RS02530	SM00382	ATPases associated with a variety of cellular activities
AC885_RS02555	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC885_RS02555	SM00292	breast cancer carboxy-terminal domain
AC885_RS02555	SM00532	Ligase N family
AC885_RS02560	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AC885_RS02565	SM00968	SMC proteins Flexible Hinge Domain
AC885_RS02575	SM00986	Uracil DNA glycosylase superfamily
AC885_RS02575	SM00987	UreE urease accessory protein, C-terminal domain 
AC885_RS02585	SM00448	cheY-homologous receiver domain
AC885_RS02585	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS02600	SM00387	Histidine kinase-like ATPases
AC885_RS02600	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS02615	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS02630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS02630	SM00895	AC885_RS02630
AC885_RS02635	SM01130	AC885_RS02635
AC885_RS02690	SM00387	Histidine kinase-like ATPases
AC885_RS02690	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS02695	SM00448	cheY-homologous receiver domain
AC885_RS02695	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS02720	SM00411	bacterial (prokaryotic) histone like domain
AC885_RS02725	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AC885_RS02735	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AC885_RS02740	SM00316	Ribosomal protein S1-like RNA-binding domain
AC885_RS02740	SM00357	Cold shock protein domain
AC885_RS02740	SM00955	AC885_RS02740
AC885_RS02750	SM01144	AC885_RS02750
AC885_RS02785	SM00155	Phospholipase D. Active site motifs.
AC885_RS02830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC885_RS02835	SM00267	diguanylate cyclase
AC885_RS02885	SM00883	Chaperonin 10 Kd subunit
AC885_RS02895	SM00869	Autotransporter beta-domain
AC885_RS02915	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AC885_RS02955	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS02995	SM00880	AC885_RS02995
AC885_RS03000	SM00382	ATPases associated with a variety of cellular activities
AC885_RS03000	SM00962	SRP54-type protein, GTPase domain
AC885_RS03000	SM00963	SRP54-type protein, helical bundle domain
AC885_RS03035	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC885_RS03065	SM00382	ATPases associated with a variety of cellular activities
AC885_RS03085	SM00919	Malic enzyme, NAD binding domain
AC885_RS03085	SM01274	AC885_RS03085
AC885_RS03105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS03105	SM00895	AC885_RS03105
AC885_RS03185	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS03190	SM00852	Probable molybdopterin binding domain
AC885_RS03210	SM00487	DEAD-like helicases superfamily
AC885_RS03210	SM00490	helicase superfamily c-terminal domain
AC885_RS03285	SM01011	Aminopeptidase P, N-terminal domain
AC885_RS03310	SM00798	AICARFT/IMPCHase bienzyme
AC885_RS03310	SM00851	MGS-like domain
AC885_RS03320	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC885_RS03335	SM00382	ATPases associated with a variety of cellular activities
AC885_RS03340	SM00341	Helicase and RNase D C-terminal
AC885_RS03340	SM00487	DEAD-like helicases superfamily
AC885_RS03340	SM00490	helicase superfamily c-terminal domain
AC885_RS03340	SM00956	AC885_RS03340
AC885_RS03355	SM00947	Carbonic anhydrase
AC885_RS03380	SM00382	ATPases associated with a variety of cellular activities
AC885_RS03385	SM00382	ATPases associated with a variety of cellular activities
AC885_RS03625	SM00448	cheY-homologous receiver domain
AC885_RS03625	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS03680	SM00382	ATPases associated with a variety of cellular activities
AC885_RS03730	SM00650	Ribosomal RNA adenine dimethylases
AC885_RS03795	SM00382	ATPases associated with a variety of cellular activities
AC885_RS03815	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS03845	SM00867	YceI-like domain 
AC885_RS03850	SM00965	Secretin and TonB N terminus short domain
AC885_RS03875	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS03885	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS03890	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS03895	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AC885_RS03975	SM00382	ATPases associated with a variety of cellular activities
AC885_RS03995	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS04010	SM00382	ATPases associated with a variety of cellular activities
AC885_RS04040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS04040	SM00895	AC885_RS04040
AC885_RS04045	SM00869	Autotransporter beta-domain
AC885_RS04050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS04050	SM00895	AC885_RS04050
AC885_RS04055	SM00829	Enoylreductase
AC885_RS04075	SM00382	ATPases associated with a variety of cellular activities
AC885_RS04135	SM00487	DEAD-like helicases superfamily
AC885_RS04135	SM00490	helicase superfamily c-terminal domain
AC885_RS04135	SM00982	AC885_RS04135
AC885_RS04135	SM01058	CarD-like/TRCF domain
AC885_RS04220	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AC885_RS04225	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AC885_RS04285	SM00014	Acid phosphatase homologues
AC885_RS04345	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS04370	SM00450	Rhodanese Homology Domain
AC885_RS04430	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS04455	SM00829	Enoylreductase
AC885_RS04485	SM00316	Ribosomal protein S1-like RNA-binding domain
AC885_RS04485	SM00322	K homology RNA-binding domain
AC885_RS04490	SM01387	AC885_RS04490
AC885_RS04535	SM00382	ATPases associated with a variety of cellular activities
AC885_RS04615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS04615	SM00866	AC885_RS04615
AC885_RS04620	SM00878	Biotin carboxylase C-terminal domain
AC885_RS04670	SM00382	ATPases associated with a variety of cellular activities
AC885_RS04780	SM00434	DNA Topoisomerase IV
AC885_RS04790	SM00830	Chorismate mutase type II
AC885_RS04810	SM00316	Ribosomal protein S1-like RNA-binding domain
AC885_RS04815	SM00411	bacterial (prokaryotic) histone like domain
AC885_RS04865	SM00893	Electron transfer flavoprotein domain
AC885_RS04870	SM00893	Electron transfer flavoprotein domain
AC885_RS04905	SM00382	ATPases associated with a variety of cellular activities
AC885_RS04920	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC885_RS04970	SM00363	S4 RNA-binding domain
AC885_RS05015	SM00421	helix_turn_helix, Lux Regulon
AC885_RS05015	SM00448	cheY-homologous receiver domain
AC885_RS05020	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC885_RS05020	SM00091	PAS domain
AC885_RS05020	SM00387	Histidine kinase-like ATPases
AC885_RS05020	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS05055	SM00861	Transketolase, pyrimidine binding domain
AC885_RS05060	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC885_RS05115	SM00271	DnaJ molecular chaperone homology domain
AC885_RS05135	SM00852	Probable molybdopterin binding domain
AC885_RS05155	SM00316	Ribosomal protein S1-like RNA-binding domain
AC885_RS05190	SM00448	cheY-homologous receiver domain
AC885_RS05195	SM00073	Histidine Phosphotransfer domain
AC885_RS05195	SM00260	Two component signalling adaptor domain
AC885_RS05195	SM00387	Histidine kinase-like ATPases
AC885_RS05195	SM01231	AC885_RS05195
AC885_RS05200	SM00260	Two component signalling adaptor domain
AC885_RS05205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC885_RS05205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS05215	SM00448	cheY-homologous receiver domain
AC885_RS05220	SM00448	cheY-homologous receiver domain
AC885_RS05260	SM01091	Transporter associated domain
AC885_RS05275	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC885_RS05300	SM01323	AC885_RS05300
AC885_RS05345	SM00869	Autotransporter beta-domain
AC885_RS05395	SM00919	Malic enzyme, NAD binding domain
AC885_RS05395	SM01274	AC885_RS05395
AC885_RS05420	SM00382	ATPases associated with a variety of cellular activities
AC885_RS05465	SM00382	ATPases associated with a variety of cellular activities
AC885_RS05475	SM01103	AC885_RS05475
AC885_RS05515	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC885_RS05535	SM00448	cheY-homologous receiver domain
AC885_RS05535	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS05540	SM00052	Putative diguanylate phosphodiesterase
AC885_RS05540	SM00267	diguanylate cyclase
AC885_RS05540	SM00387	Histidine kinase-like ATPases
AC885_RS05540	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS05550	SM00382	ATPases associated with a variety of cellular activities
AC885_RS05570	SM00382	ATPases associated with a variety of cellular activities
AC885_RS05595	SM00822	AC885_RS05595
AC885_RS05620	SM00382	ATPases associated with a variety of cellular activities
AC885_RS05630	SM00869	Autotransporter beta-domain
AC885_RS05655	SM00849	Metallo-beta-lactamase superfamily
AC885_RS05665	SM00481	DNA polymerase alpha chain like domain
AC885_RS05685	SM00919	Malic enzyme, NAD binding domain
AC885_RS05685	SM01274	AC885_RS05685
AC885_RS05695	SM00344	helix_turn_helix ASNC type
AC885_RS05705	SM00861	Transketolase, pyrimidine binding domain
AC885_RS05770	SM00316	Ribosomal protein S1-like RNA-binding domain
AC885_RS05770	SM00732	Likely ribonuclease with RNase H fold.
AC885_RS05775	SM00491	AC885_RS05775
AC885_RS05785	SM00363	S4 RNA-binding domain
AC885_RS05800	SM00822	AC885_RS05800
AC885_RS05855	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC885_RS05865	SM00822	AC885_RS05865
AC885_RS05890	SM01007	Class II Aldolase and Adducin N-terminal domain
AC885_RS05970	SM01211	AC885_RS05970
AC885_RS05975	SM00912	haemagglutination activity domain
AC885_RS05990	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC885_RS05995	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS06000	SM01007	Class II Aldolase and Adducin N-terminal domain
AC885_RS06035	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS06040	SM01130	AC885_RS06040
AC885_RS06085	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS06095	SM00420	helix_turn_helix, Deoxyribose operon repressor
AC885_RS06095	SM01134	AC885_RS06095
AC885_RS06100	SM00382	ATPases associated with a variety of cellular activities
AC885_RS06105	SM00382	ATPases associated with a variety of cellular activities
AC885_RS06140	SM00344	helix_turn_helix ASNC type
AC885_RS06180	SM00869	Autotransporter beta-domain
AC885_RS06190	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC885_RS06190	SM01240	AC885_RS06190
AC885_RS06205	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS06230	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS06245	SM00382	ATPases associated with a variety of cellular activities
AC885_RS06290	SM00849	Metallo-beta-lactamase superfamily
AC885_RS06290	SM01027	Beta-Casp domain
AC885_RS06315	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS06335	SM00829	Enoylreductase
AC885_RS06345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS06385	SM00382	ATPases associated with a variety of cellular activities
AC885_RS06390	SM00354	helix_turn _helix lactose operon repressor
AC885_RS06450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS06490	SM00873	B3/4 domain
AC885_RS06490	SM00874	tRNA synthetase B5 domain
AC885_RS06490	SM00896	Ferredoxin-fold anticodon binding domain
AC885_RS06495	SM00411	bacterial (prokaryotic) histone like domain
AC885_RS06500	SM00422	helix_turn_helix, mercury resistance
AC885_RS06605	SM00822	AC885_RS06605
AC885_RS06620	SM00382	ATPases associated with a variety of cellular activities
AC885_RS06635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS06635	SM00387	Histidine kinase-like ATPases
AC885_RS06635	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS06640	SM00448	cheY-homologous receiver domain
AC885_RS06640	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS06645	SM00382	ATPases associated with a variety of cellular activities
AC885_RS06675	SM00881	CoA binding domain
AC885_RS06745	SM00858	AC885_RS06745
AC885_RS06755	SM00240	Forkhead associated domain
AC885_RS06755	SM00382	ATPases associated with a variety of cellular activities
AC885_RS06905	SM00271	DnaJ molecular chaperone homology domain
AC885_RS06930	SM00382	ATPases associated with a variety of cellular activities
AC885_RS06955	SM01329	AC885_RS06955
AC885_RS06975	SM00448	cheY-homologous receiver domain
AC885_RS06975	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS07030	SM00463	Small MutS-related domain
AC885_RS07040	SM00843	AC885_RS07040
AC885_RS07050	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07080	SM00267	diguanylate cyclase
AC885_RS07105	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS07125	SM01006	Siderophore biosynthesis protein domain
AC885_RS07175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC885_RS07175	SM00267	diguanylate cyclase
AC885_RS07195	SM00421	helix_turn_helix, Lux Regulon
AC885_RS07195	SM00448	cheY-homologous receiver domain
AC885_RS07200	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC885_RS07250	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS07265	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07285	SM00834	Putative regulatory protein
AC885_RS07300	SM00421	helix_turn_helix, Lux Regulon
AC885_RS07330	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS07345	SM01001	AIR carboxylase
AC885_RS07360	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS07365	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS07375	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS07375	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC885_RS07385	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07475	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07485	SM00493	AC885_RS07485
AC885_RS07560	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AC885_RS07560	SM00534	ATPase domain of DNA mismatch repair MUTS family
AC885_RS07565	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AC885_RS07580	SM01130	AC885_RS07580
AC885_RS07600	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS07600	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC885_RS07610	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07615	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC885_RS07615	SM00954	Region found in RelA / SpoT proteins
AC885_RS07620	SM01409	AC885_RS07620
AC885_RS07625	SM00072	Guanylate kinase homologues.
AC885_RS07640	SM00822	AC885_RS07640
AC885_RS07655	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS07690	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC885_RS07690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS07695	SM00052	Putative diguanylate phosphodiesterase
AC885_RS07695	SM00267	diguanylate cyclase
AC885_RS07710	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC885_RS07715	SM01230	AC885_RS07715
AC885_RS07720	SM00091	PAS domain
AC885_RS07720	SM00387	Histidine kinase-like ATPases
AC885_RS07720	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS07725	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07725	SM00448	cheY-homologous receiver domain
AC885_RS07750	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07795	SM00487	DEAD-like helicases superfamily
AC885_RS07795	SM00490	helicase superfamily c-terminal domain
AC885_RS07845	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07870	SM00984	UDP binding domain
AC885_RS07920	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07925	SM00382	ATPases associated with a variety of cellular activities
AC885_RS07980	SM00327	von Willebrand factor (vWF) type A domain
AC885_RS07985	SM00028	Tetratricopeptide repeats
AC885_RS07985	SM00327	von Willebrand factor (vWF) type A domain
AC885_RS08025	SM00421	helix_turn_helix, Lux Regulon
AC885_RS08025	SM00448	cheY-homologous receiver domain
AC885_RS08030	SM00869	Autotransporter beta-domain
AC885_RS08035	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS08140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC885_RS08155	SM00822	AC885_RS08155
AC885_RS08255	SM00382	ATPases associated with a variety of cellular activities
AC885_RS08260	SM00382	ATPases associated with a variety of cellular activities
AC885_RS08340	SM00248	ankyrin repeats
AC885_RS08345	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS08350	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS08350	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC885_RS08360	SM00382	ATPases associated with a variety of cellular activities
AC885_RS08370	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC885_RS08410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS08410	SM00895	AC885_RS08410
AC885_RS08455	SM00052	Putative diguanylate phosphodiesterase
AC885_RS08460	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS08460	SM00073	Histidine Phosphotransfer domain
AC885_RS08460	SM00091	PAS domain
AC885_RS08460	SM00387	Histidine kinase-like ATPases
AC885_RS08460	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS08460	SM00448	cheY-homologous receiver domain
AC885_RS08465	SM00421	helix_turn_helix, Lux Regulon
AC885_RS08465	SM00448	cheY-homologous receiver domain
AC885_RS08470	SM00912	haemagglutination activity domain
AC885_RS08565	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS08585	SM01091	Transporter associated domain
AC885_RS08605	SM00028	Tetratricopeptide repeats
AC885_RS08610	SM00840	AC885_RS08610
AC885_RS08615	SM00478	endonuclease III
AC885_RS08730	SM00382	ATPases associated with a variety of cellular activities
AC885_RS08745	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS08750	SM00881	CoA binding domain
AC885_RS08780	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC885_RS08805	SM00028	Tetratricopeptide repeats
AC885_RS08820	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC885_RS08835	SM00869	Autotransporter beta-domain
AC885_RS08850	SM00487	DEAD-like helicases superfamily
AC885_RS08850	SM00490	helicase superfamily c-terminal domain
AC885_RS08855	SM00226	Low molecular weight phosphatase family
AC885_RS08880	SM00271	DnaJ molecular chaperone homology domain
AC885_RS08935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS08935	SM00866	AC885_RS08935
AC885_RS08995	SM00382	ATPases associated with a variety of cellular activities
AC885_RS09045	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC885_RS09095	SM00387	Histidine kinase-like ATPases
AC885_RS09095	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS09100	SM00448	cheY-homologous receiver domain
AC885_RS09115	SM00562	AC885_RS09115
AC885_RS09145	SM00564	beta-propeller repeat
AC885_RS09150	SM00382	ATPases associated with a variety of cellular activities
AC885_RS09170	SM00244	prohibitin homologues
AC885_RS09175	SM00244	prohibitin homologues
AC885_RS09185	SM00788	Adenylosuccinate synthetase
AC885_RS09200	SM00400	zinc finger
AC885_RS09200	SM00493	AC885_RS09200
AC885_RS09200	SM00766	DNA primase DnaG DnaB-binding
AC885_RS09250	SM00382	ATPases associated with a variety of cellular activities
AC885_RS09355	SM00382	ATPases associated with a variety of cellular activities
AC885_RS09395	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS09415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC885_RS09430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS09430	SM00895	AC885_RS09430
AC885_RS09450	SM00382	ATPases associated with a variety of cellular activities
AC885_RS09485	SM00464	Found in ATP-dependent protease La (LON)
AC885_RS09495	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS09505	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC885_RS09600	SM00822	AC885_RS09600
AC885_RS09770	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC885_RS09770	SM00465	GIY-YIG type nucleases (URI domain)
AC885_RS09805	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS09825	SM00382	ATPases associated with a variety of cellular activities
AC885_RS09865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS09865	SM00895	AC885_RS09865
AC885_RS09885	SM00382	ATPases associated with a variety of cellular activities
AC885_RS09940	SM00411	bacterial (prokaryotic) histone like domain
AC885_RS09945	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC885_RS10090	SM00479	AC885_RS10090
AC885_RS10150	SM00841	Elongation factor P, C-terminal
AC885_RS10150	SM01185	AC885_RS10150
AC885_RS10180	SM00382	ATPases associated with a variety of cellular activities
AC885_RS10195	SM00028	Tetratricopeptide repeats
AC885_RS10225	SM00858	AC885_RS10225
AC885_RS10270	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC885_RS10275	SM00382	ATPases associated with a variety of cellular activities
AC885_RS10295	SM00318	Staphylococcal nuclease homologues
AC885_RS10315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS10360	SM00421	helix_turn_helix, Lux Regulon
AC885_RS10365	SM00421	helix_turn_helix, Lux Regulon
AC885_RS10385	SM00882	Coenzyme A transferase
AC885_RS10390	SM00882	Coenzyme A transferase
AC885_RS10445	SM00382	ATPases associated with a variety of cellular activities
AC885_RS10445	SM00464	Found in ATP-dependent protease La (LON)
AC885_RS10450	SM00382	ATPases associated with a variety of cellular activities
AC885_RS10450	SM00994	ClpX C4-type zinc finger
AC885_RS10450	SM01086	C-terminal, D2-small domain, of ClpB protein
AC885_RS10480	SM00357	Cold shock protein domain
AC885_RS10495	SM00869	Autotransporter beta-domain
AC885_RS10530	SM00382	ATPases associated with a variety of cellular activities
AC885_RS10535	SM00965	Secretin and TonB N terminus short domain
AC885_RS10565	SM00904	Riboflavin kinase
AC885_RS10590	SM00344	helix_turn_helix ASNC type
AC885_RS10655	SM00749	bacterial OsmY and nodulation domain
AC885_RS10705	SM00422	helix_turn_helix, mercury resistance
AC885_RS10730	SM00257	Lysin motif
AC885_RS10745	SM01207	AC885_RS10745
AC885_RS10795	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC885_RS10835	SM00869	Autotransporter beta-domain
AC885_RS10845	SM00155	Phospholipase D. Active site motifs.
AC885_RS10860	SM01005	Alanine racemase, C-terminal domain
AC885_RS10870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS10870	SM00331	Sigma factor PP2C-like phosphatases
AC885_RS10870	SM01049	AC885_RS10870
AC885_RS10945	SM00382	ATPases associated with a variety of cellular activities
AC885_RS11060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC885_RS11060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS11105	SM00382	ATPases associated with a variety of cellular activities
AC885_RS11120	SM00450	Rhodanese Homology Domain
AC885_RS11135	SM00829	Enoylreductase
AC885_RS11150	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC885_RS11170	SM01329	AC885_RS11170
AC885_RS11175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS11195	SM00382	ATPases associated with a variety of cellular activities
AC885_RS11260	SM01209	AC885_RS11260
AC885_RS11260	SM01210	AC885_RS11260
AC885_RS11290	SM00869	Autotransporter beta-domain
AC885_RS11330	SM00316	Ribosomal protein S1-like RNA-binding domain
AC885_RS11350	SM00382	ATPases associated with a variety of cellular activities
AC885_RS11405	SM00481	DNA polymerase alpha chain like domain
AC885_RS11415	SM00382	ATPases associated with a variety of cellular activities
AC885_RS11415	SM00487	DEAD-like helicases superfamily
AC885_RS11415	SM00490	helicase superfamily c-terminal domain
AC885_RS11415	SM00847	Helicase associated domain (HA2)  Add an annotation
AC885_RS11480	SM00382	ATPases associated with a variety of cellular activities
AC885_RS11565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS11565	SM00866	AC885_RS11565
AC885_RS11605	SM00981	AC885_RS11605
AC885_RS11660	SM00028	Tetratricopeptide repeats
AC885_RS11660	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS11670	SM01192	AC885_RS11670
AC885_RS11670	SM01193	AC885_RS11670
AC885_RS11725	SM00382	ATPases associated with a variety of cellular activities
AC885_RS11740	SM00882	Coenzyme A transferase
AC885_RS11900	SM00358	Double-stranded RNA binding motif
AC885_RS11900	SM00535	Ribonuclease III family
AC885_RS11910	SM00838	Elongation factor G C-terminus
AC885_RS11915	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC885_RS11940	SM00825	Beta-ketoacyl synthase
AC885_RS11950	SM00822	AC885_RS11950
AC885_RS11955	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AC885_RS11990	SM00644	AC885_RS11990
AC885_RS12050	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC885_RS12055	SM01329	AC885_RS12055
AC885_RS12075	SM00382	ATPases associated with a variety of cellular activities
AC885_RS12110	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC885_RS12150	SM00852	Probable molybdopterin binding domain
AC885_RS12170	SM00052	Putative diguanylate phosphodiesterase
AC885_RS12190	SM00382	ATPases associated with a variety of cellular activities
AC885_RS12200	SM00855	Phosphoglycerate mutase family
AC885_RS12210	SM00851	MGS-like domain
AC885_RS12210	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AC885_RS12215	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AC885_RS12280	SM00267	diguanylate cyclase
AC885_RS12285	SM00244	prohibitin homologues
AC885_RS12345	SM00935	Outer membrane protein (OmpH-like)
AC885_RS12355	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC885_RS12400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC885_RS12495	SM00382	ATPases associated with a variety of cellular activities
AC885_RS12560	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC885_RS12560	SM00091	PAS domain
AC885_RS12560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC885_RS12560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS12565	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC885_RS12565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS12570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC885_RS12570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS12585	SM00047	Lysozyme subfamily 2
AC885_RS12630	SM00858	AC885_RS12630
AC885_RS12645	SM00382	ATPases associated with a variety of cellular activities
AC885_RS12645	SM00962	SRP54-type protein, GTPase domain
AC885_RS12665	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS12675	SM00382	ATPases associated with a variety of cellular activities
AC885_RS12690	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC885_RS12710	SM00354	helix_turn _helix lactose operon repressor
AC885_RS12735	SM00881	CoA binding domain
AC885_RS12740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS12740	SM00895	AC885_RS12740
AC885_RS12765	SM00869	Autotransporter beta-domain
AC885_RS12790	SM00155	Phospholipase D. Active site motifs.
AC885_RS12835	SM00642	Alpha-amylase domain
AC885_RS12840	SM00642	Alpha-amylase domain
AC885_RS12845	SM00642	Alpha-amylase domain
AC885_RS12850	SM00642	Alpha-amylase domain
AC885_RS12855	SM00642	Alpha-amylase domain
AC885_RS12865	SM00642	Alpha-amylase domain
AC885_RS12885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS13020	SM00953	AC885_RS13020
AC885_RS13055	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13105	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13110	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13145	SM00434	DNA Topoisomerase IV
AC885_RS13155	SM00387	Histidine kinase-like ATPases
AC885_RS13155	SM00433	TopoisomeraseII
AC885_RS13165	SM00357	Cold shock protein domain
AC885_RS13165	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13165	SM00959	Rho termination factor, N-terminal domain
AC885_RS13205	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AC885_RS13205	SM00474	3'-5' exonuclease
AC885_RS13205	SM00475	5'-3' exonuclease
AC885_RS13205	SM00482	DNA polymerase A domain
AC885_RS13245	SM00316	Ribosomal protein S1-like RNA-binding domain
AC885_RS13255	SM00363	S4 RNA-binding domain
AC885_RS13280	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AC885_RS13355	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13360	SM00327	von Willebrand factor (vWF) type A domain
AC885_RS13385	SM01005	Alanine racemase, C-terminal domain
AC885_RS13420	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13485	SM00869	Autotransporter beta-domain
AC885_RS13490	SM00869	Autotransporter beta-domain
AC885_RS13505	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13505	SM01086	C-terminal, D2-small domain, of ClpB protein
AC885_RS13510	SM00100	Cyclic nucleotide-monophosphate binding domain
AC885_RS13510	SM00419	helix_turn_helix, cAMP Regulatory protein
AC885_RS13580	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS13595	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13680	SM00479	AC885_RS13680
AC885_RS13740	SM00938	Nitrogen regulatory protein P-II
AC885_RS13775	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC885_RS13780	SM00852	Probable molybdopterin binding domain
AC885_RS13785	SM00852	Probable molybdopterin binding domain
AC885_RS13835	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC885_RS13835	SM00876	Biotin and Thiamin Synthesis associated domain
AC885_RS13860	SM00422	helix_turn_helix, mercury resistance
AC885_RS13930	SM00938	Nitrogen regulatory protein P-II
AC885_RS13940	SM00869	Autotransporter beta-domain
AC885_RS13960	SM00382	ATPases associated with a variety of cellular activities
AC885_RS13965	SM00382	ATPases associated with a variety of cellular activities
AC885_RS14010	SM00382	ATPases associated with a variety of cellular activities
AC885_RS14010	SM01086	C-terminal, D2-small domain, of ClpB protein
AC885_RS14020	SM01359	AC885_RS14020
AC885_RS14020	SM01360	AC885_RS14020
AC885_RS14030	SM00357	Cold shock protein domain
AC885_RS14095	SM00822	AC885_RS14095
AC885_RS14180	SM00670	Large family of predicted nucleotide-binding domains
AC885_RS14195	SM00382	ATPases associated with a variety of cellular activities
AC885_RS14230	SM00861	Transketolase, pyrimidine binding domain
AC885_RS14245	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS14270	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC885_RS14270	SM00924	MgtE intracellular N domain
AC885_RS14325	SM00382	ATPases associated with a variety of cellular activities
AC885_RS14325	SM00930	AC885_RS14325
AC885_RS14380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS14380	SM00895	AC885_RS14380
AC885_RS14415	SM00382	ATPases associated with a variety of cellular activities
AC885_RS14445	SM00422	helix_turn_helix, mercury resistance
AC885_RS14470	SM00822	AC885_RS14470
AC885_RS14555	SM00822	AC885_RS14555
AC885_RS14580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC885_RS14605	SM00829	Enoylreductase
AC885_RS14620	SM00382	ATPases associated with a variety of cellular activities
AC885_RS14645	SM00344	helix_turn_helix ASNC type
AC885_RS14690	SM00248	ankyrin repeats
AC885_RS14715	SM00382	ATPases associated with a variety of cellular activities
AC885_RS14750	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS14765	SM00382	ATPases associated with a variety of cellular activities
AC885_RS14805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS14805	SM00895	AC885_RS14805
AC885_RS14875	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AC885_RS14875	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AC885_RS14895	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS14930	SM00912	haemagglutination activity domain
AC885_RS14950	SM00528	Domain in histone-like proteins of HNS family
AC885_RS14990	SM00257	Lysin motif
AC885_RS15040	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC885_RS15065	SM00448	cheY-homologous receiver domain
AC885_RS15070	SM00387	Histidine kinase-like ATPases
AC885_RS15165	SM00363	S4 RNA-binding domain
AC885_RS15195	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC885_RS15235	SM00382	ATPases associated with a variety of cellular activities
AC885_RS15255	SM00487	DEAD-like helicases superfamily
AC885_RS15255	SM00490	helicase superfamily c-terminal domain
AC885_RS15265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS15265	SM00895	AC885_RS15265
AC885_RS15300	SM00344	helix_turn_helix ASNC type
AC885_RS15380	SM00878	Biotin carboxylase C-terminal domain
AC885_RS15410	SM00955	AC885_RS15410
AC885_RS15440	SM00344	helix_turn_helix ASNC type
AC885_RS15470	SM00957	SecA DEAD-like domain
AC885_RS15470	SM00958	SecA preprotein cross-linking domain
AC885_RS15490	SM00864	Tubulin/FtsZ family, GTPase domain
AC885_RS15490	SM00865	Tubulin/FtsZ family, C-terminal domain
AC885_RS15495	SM00842	Cell division protein FtsA
AC885_RS15565	SM00382	ATPases associated with a variety of cellular activities
AC885_RS15580	SM00151	SWI complex, BAF60b domains
AC885_RS15615	SM00344	helix_turn_helix ASNC type
AC885_RS15720	SM00382	ATPases associated with a variety of cellular activities
AC885_RS15720	SM01086	C-terminal, D2-small domain, of ClpB protein
AC885_RS15735	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AC885_RS15750	SM00382	ATPases associated with a variety of cellular activities
AC885_RS15820	SM00996	S-adenosyl-L-homocysteine hydrolase
AC885_RS15820	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AC885_RS15875	SM00487	DEAD-like helicases superfamily
AC885_RS15875	SM00490	helicase superfamily c-terminal domain
AC885_RS15880	SM00986	Uracil DNA glycosylase superfamily
AC885_RS15880	SM00987	UreE urease accessory protein, C-terminal domain 
AC885_RS15895	SM00155	Phospholipase D. Active site motifs.
AC885_RS15900	SM00382	ATPases associated with a variety of cellular activities
AC885_RS15945	SM00344	helix_turn_helix ASNC type
AC885_RS15945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS15990	SM00422	helix_turn_helix, mercury resistance
AC885_RS15990	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS16035	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS16045	SM00869	Autotransporter beta-domain
AC885_RS16150	SM01400	AC885_RS16150
AC885_RS16170	SM00028	Tetratricopeptide repeats
AC885_RS16175	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AC885_RS16175	SM01232	AC885_RS16175
AC885_RS16180	SM00849	Metallo-beta-lactamase superfamily
AC885_RS16215	SM00387	Histidine kinase-like ATPases
AC885_RS16215	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS16220	SM00448	cheY-homologous receiver domain
AC885_RS16220	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS16280	SM00984	UDP binding domain
AC885_RS16310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS16365	SM00988	UreE urease accessory protein, N-terminal domain
AC885_RS16395	SM00422	helix_turn_helix, mercury resistance
AC885_RS16415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS16415	SM00866	AC885_RS16415
AC885_RS16495	SM00382	ATPases associated with a variety of cellular activities
AC885_RS16500	SM00382	ATPases associated with a variety of cellular activities
AC885_RS16510	SM00822	AC885_RS16510
AC885_RS16595	SM00849	Metallo-beta-lactamase superfamily
AC885_RS16600	SM00257	Lysin motif
AC885_RS16640	SM00448	cheY-homologous receiver domain
AC885_RS16640	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS16645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS16645	SM00387	Histidine kinase-like ATPases
AC885_RS16735	SM00382	ATPases associated with a variety of cellular activities
AC885_RS16770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS16770	SM00866	AC885_RS16770
AC885_RS16795	SM00903	Flavin reductase like domain
AC885_RS16870	SM00925	MltA specific insert domain
AC885_RS16900	SM00905	Dihydroneopterin aldolase
AC885_RS16910	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC885_RS16970	SM00382	ATPases associated with a variety of cellular activities
AC885_RS16990	SM00487	DEAD-like helicases superfamily
AC885_RS16990	SM00490	helicase superfamily c-terminal domain
AC885_RS17015	SM00382	ATPases associated with a variety of cellular activities
AC885_RS17130	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS17170	SM00155	Phospholipase D. Active site motifs.
AC885_RS17190	SM00834	Putative regulatory protein
AC885_RS17220	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC885_RS17240	SM00382	ATPases associated with a variety of cellular activities
AC885_RS17295	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC885_RS17300	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AC885_RS17330	SM00937	AC885_RS17330
AC885_RS17365	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS17375	SM00881	CoA binding domain
AC885_RS17400	SM00344	helix_turn_helix ASNC type
AC885_RS17430	SM00881	CoA binding domain
AC885_RS17440	SM00829	Enoylreductase
AC885_RS17515	SM01130	AC885_RS17515
AC885_RS17575	SM00881	CoA binding domain
AC885_RS17580	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS17590	SM00861	Transketolase, pyrimidine binding domain
AC885_RS17630	SM00382	ATPases associated with a variety of cellular activities
AC885_RS17635	SM00382	ATPases associated with a variety of cellular activities
AC885_RS17665	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS17690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC885_RS17690	SM00245	tail specific protease
AC885_RS17700	SM00855	Phosphoglycerate mutase family
AC885_RS17705	SM00450	Rhodanese Homology Domain
AC885_RS17765	SM00382	ATPases associated with a variety of cellular activities
AC885_RS17785	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC885_RS17850	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC885_RS17865	SM00448	cheY-homologous receiver domain
AC885_RS17870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC885_RS17870	SM00387	Histidine kinase-like ATPases
AC885_RS17870	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS17945	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS17965	SM00344	helix_turn_helix ASNC type
AC885_RS18020	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC885_RS18040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS18040	SM00895	AC885_RS18040
AC885_RS18085	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS18105	SM00869	Autotransporter beta-domain
AC885_RS18135	SM01119	AC885_RS18135
AC885_RS18145	SM00244	prohibitin homologues
AC885_RS18240	SM00387	Histidine kinase-like ATPases
AC885_RS18240	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS18275	SM01234	AC885_RS18275
AC885_RS18290	SM00382	ATPases associated with a variety of cellular activities
AC885_RS18290	SM00760	Bacterial dnaA protein helix-turn-helix domain
AC885_RS18295	SM00480	DNA polymerase III beta subunit
AC885_RS18300	SM00387	Histidine kinase-like ATPases
AC885_RS18300	SM00433	TopoisomeraseII
AC885_RS18305	SM00346	helix_turn_helix isocitrate lyase regulation
AC885_RS18330	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS18330	SM00871	Bacterial transcription activator, effector binding domain
AC885_RS18350	SM00422	helix_turn_helix, mercury resistance
AC885_RS18355	SM00849	Metallo-beta-lactamase superfamily
AC885_RS18385	SM00878	Biotin carboxylase C-terminal domain
AC885_RS18385	SM01209	AC885_RS18385
AC885_RS18405	SM01119	AC885_RS18405
AC885_RS18440	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AC885_RS18440	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AC885_RS18440	SM00493	AC885_RS18440
AC885_RS18450	SM00382	ATPases associated with a variety of cellular activities
AC885_RS18480	SM00344	helix_turn_helix ASNC type
AC885_RS18490	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
AC885_RS18510	SM01018	B12 binding domain
AC885_RS18590	SM00838	Elongation factor G C-terminus
AC885_RS18590	SM00889	Elongation factor G, domain IV
AC885_RS18600	SM01403	AC885_RS18600
AC885_RS18620	SM01382	AC885_RS18620
AC885_RS18620	SM01383	AC885_RS18620
AC885_RS18635	SM00322	K homology RNA-binding domain
AC885_RS18670	SM01374	AC885_RS18670
AC885_RS18745	SM00363	S4 RNA-binding domain
AC885_RS18745	SM01390	AC885_RS18745
AC885_RS18750	SM00662	RNA polymerases D
AC885_RS18780	SM01004	Delta-aminolevulinic acid dehydratase
AC885_RS18815	SM01219	AC885_RS18815
AC885_RS18835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC885_RS18885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS18885	SM00866	AC885_RS18885
AC885_RS18930	SM00382	ATPases associated with a variety of cellular activities
AC885_RS18955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS18955	SM00895	AC885_RS18955
AC885_RS18985	SM01130	AC885_RS18985
AC885_RS19000	SM00257	Lysin motif
AC885_RS19055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS19065	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS19070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC885_RS19085	SM00382	ATPases associated with a variety of cellular activities
AC885_RS19100	SM00829	Enoylreductase
AC885_RS19150	SM00382	ATPases associated with a variety of cellular activities
AC885_RS19200	SM00984	UDP binding domain
AC885_RS19290	SM00100	Cyclic nucleotide-monophosphate binding domain
AC885_RS19315	SM00829	Enoylreductase
AC885_RS19345	SM00382	ATPases associated with a variety of cellular activities
AC885_RS19455	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS19545	SM00342	helix_turn_helix, arabinose operon control protein
AC885_RS19660	SM00421	helix_turn_helix, Lux Regulon
AC885_RS19700	SM00382	ATPases associated with a variety of cellular activities
AC885_RS19715	SM00062	Bacterial periplasmic substrate-binding proteins
AC885_RS19720	SM00382	ATPases associated with a variety of cellular activities
AC885_RS19740	SM00478	endonuclease III
AC885_RS19745	SM00530	Helix-turn-helix XRE-family like proteins 
AC885_RS19820	SM01060	AC885_RS19820
AC885_RS19830	SM00382	ATPases associated with a variety of cellular activities
AC885_RS19850	SM00382	ATPases associated with a variety of cellular activities
AC885_RS19855	SM00382	ATPases associated with a variety of cellular activities
AC885_RS19885	SM00448	cheY-homologous receiver domain
AC885_RS19885	SM00862	Transcriptional regulatory protein, C terminal
AC885_RS19890	SM00387	Histidine kinase-like ATPases
AC885_RS19890	SM00388	His Kinase A (phosphoacceptor) domain
AC885_RS19915	SM00357	Cold shock protein domain
