locus-tag	class	description
C3D92_RS00005	PF13932	GidA associated domain
C3D92_RS00005	PF01134	Glucose inhibited division protein A
C3D92_RS00010	PF02527	rRNA small subunit methyltransferase G
C3D92_RS00015	PF13614	AAA domain
C3D92_RS00025	PF17762	HTH domain found in ParB protein
C3D92_RS00025	PF02195	ParB-like nuclease domain
C3D92_RS00050	PF03143	Elongation factor Tu C-terminal domain
C3D92_RS00050	PF03144	Elongation factor Tu domain 2
C3D92_RS00050	PF00009	Elongation factor Tu GTP binding domain
C3D92_RS00060	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
C3D92_RS00065	PF02357	Transcription termination factor nusG
C3D92_RS00065	PF00467	KOW motif
C3D92_RS00070	PF00298	Ribosomal protein L11, RNA binding domain
C3D92_RS00070	PF03946	Ribosomal protein L11, N-terminal domain
C3D92_RS00075	PF00687	Ribosomal protein L1p/L10e family
C3D92_RS00080	PF00466	Ribosomal protein L10
C3D92_RS00085	PF16320	Ribosomal protein L7/L12 dimerisation domain
C3D92_RS00085	PF00542	Ribosomal protein L7/L12 C-terminal domain
C3D92_RS00090	PF04563	RNA polymerase beta subunit
C3D92_RS00090	PF00562	RNA polymerase Rpb2, domain 6
C3D92_RS00090	PF10385	RNA polymerase beta subunit external 1 domain
C3D92_RS00090	PF04560	RNA polymerase Rpb2, domain 7
C3D92_RS00090	PF04561	RNA polymerase Rpb2, domain 2
C3D92_RS00090	PF04565	RNA polymerase Rpb2, domain 3
C3D92_RS00095	PF00623	RNA polymerase Rpb1, domain 2
C3D92_RS00095	PF04998	RNA polymerase Rpb1, domain 5
C3D92_RS00095	PF05000	RNA polymerase Rpb1, domain 4
C3D92_RS00095	PF04983	RNA polymerase Rpb1, domain 3
C3D92_RS00095	PF04997	RNA polymerase Rpb1, domain 1
C3D92_RS00125	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS00125	PF00072	Response regulator receiver domain
C3D92_RS00135	PF02515	CoA-transferase family III
C3D92_RS00150	PF01575	MaoC like domain
C3D92_RS00155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS00155	PF03466	LysR substrate binding domain
C3D92_RS00160	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS00180	PF02091	Glycyl-tRNA synthetase alpha subunit
C3D92_RS00185	PF02092	Glycyl-tRNA synthetase beta subunit
C3D92_RS00185	PF05746	DALR anticodon binding domain
C3D92_RS00195	PF01553	Acyltransferase
C3D92_RS00205	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3D92_RS00210	PF01327	Polypeptide deformylase
C3D92_RS00250	PF00561	alpha/beta hydrolase fold
C3D92_RS00255	PF07021	Methionine biosynthesis protein MetW
C3D92_RS00255	PF00561	alpha/beta hydrolase fold
C3D92_RS00270	PF07690	Major Facilitator Superfamily
C3D92_RS00280	PF01177	Asp/Glu/Hydantoin racemase
C3D92_RS00285	PF00005	ABC transporter
C3D92_RS00290	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS00295	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS00300	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS00335	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS00350	PF00970	Oxidoreductase FAD-binding domain
C3D92_RS00350	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS00350	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS00355	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS00365	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS00395	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS00395	PF00183	Hsp90 protein
C3D92_RS00400	PF13417	Glutathione S-transferase, N-terminal domain
C3D92_RS00400	PF00043	Glutathione S-transferase, C-terminal domain
C3D92_RS00405	PF01510	N-acetylmuramoyl-L-alanine amidase
C3D92_RS00415	PF01578	Cytochrome C assembly protein
C3D92_RS00420	PF02978	Signal peptide binding domain
C3D92_RS00420	PF02881	SRP54-type protein, helical bundle domain
C3D92_RS00420	PF00448	SRP54-type protein, GTPase domain
C3D92_RS00435	PF02719	Polysaccharide biosynthesis protein
C3D92_RS00445	PF10997	Alternate to MurJ
C3D92_RS00450	PF00862	Sucrose synthase
C3D92_RS00450	PF00534	Glycosyl transferases group 1
C3D92_RS00455	PF02397	Bacterial sugar transferase
C3D92_RS00460	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
C3D92_RS00470	PF02350	UDP-N-acetylglucosamine 2-epimerase
C3D92_RS00475	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
C3D92_RS00480	PF00132	Bacterial transferase hexapeptide (six repeats)
C3D92_RS00485	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
C3D92_RS00485	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
C3D92_RS00490	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
C3D92_RS00495	PF00534	Glycosyl transferases group 1
C3D92_RS00495	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
C3D92_RS00505	PF03309	Type III pantothenate kinase
C3D92_RS00515	PF02405	Permease MlaE
C3D92_RS00520	PF00005	ABC transporter
C3D92_RS00540	PF00768	D-alanyl-D-alanine carboxypeptidase
C3D92_RS00540	PF07943	Penicillin-binding protein 5, C-terminal domain
C3D92_RS00545	PF01063	Amino-transferase class IV
C3D92_RS00550	PF04359	Protein of unknown function (DUF493)
C3D92_RS00555	PF03099	Biotin/lipoate A/B protein ligase family
C3D92_RS00560	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
C3D92_RS00560	PF04055	Radical SAM superfamily
C3D92_RS00565	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
C3D92_RS00570	PF04321	RmlD substrate binding domain
C3D92_RS00575	PF16363	GDP-mannose 4,6 dehydratase
C3D92_RS00590	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3D92_RS00595	PF00085	Thioredoxin
C3D92_RS00595	PF01323	DSBA-like thioredoxin domain
C3D92_RS00605	PF03485	Arginyl tRNA synthetase N terminal domain
C3D92_RS00605	PF00750	tRNA synthetases class I (R)
C3D92_RS00605	PF05746	DALR anticodon binding domain
C3D92_RS00625	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS00630	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS00635	PF13416	Bacterial extracellular solute-binding protein
C3D92_RS00640	PF17912	MalK OB fold domain
C3D92_RS00640	PF00005	ABC transporter
C3D92_RS00645	PF00149	Calcineurin-like phosphoesterase
C3D92_RS00655	PF12857	TOBE-like domain
C3D92_RS00655	PF00005	ABC transporter
C3D92_RS00660	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS00675	PF00356	Bacterial regulatory proteins, lacI family
C3D92_RS00685	PF01425	Amidase
C3D92_RS00690	PF08502	LeuA allosteric (dimerisation) domain
C3D92_RS00690	PF00682	HMGL-like
C3D92_RS00700	PF04963	Sigma-54 factor, core binding domain
C3D92_RS00700	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
C3D92_RS00700	PF04552	Sigma-54, DNA binding domain
C3D92_RS00710	PF03466	LysR substrate binding domain
C3D92_RS00710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS00730	PF00585	C-terminal regulatory domain of Threonine dehydratase
C3D92_RS00730	PF00291	Pyridoxal-phosphate dependent enzyme
C3D92_RS00745	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS00745	PF07729	FCD domain
C3D92_RS00750	PF02515	CoA-transferase family III
C3D92_RS00760	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS00770	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS00785	PF02626	Carboxyltransferase domain, subdomain A and B 
C3D92_RS00790	PF02682	Carboxyltransferase domain, subdomain C and D
C3D92_RS00800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS00800	PF03466	LysR substrate binding domain
C3D92_RS00805	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3D92_RS00805	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3D92_RS00805	PF01842	ACT domain
C3D92_RS00815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS00815	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS00815	PF00672	HAMP domain
C3D92_RS00820	PF00072	Response regulator receiver domain
C3D92_RS00820	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS00825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS00825	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS00825	PF00989	PAS fold
C3D92_RS00825	PF11808	Phosphate regulon sensor protein PhoR
C3D92_RS00830	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS00830	PF00072	Response regulator receiver domain
C3D92_RS00835	PF01209	ubiE/COQ5 methyltransferase family
C3D92_RS00850	PF03109	ABC1 family
C3D92_RS00870	PF04536	TPM domain
C3D92_RS00880	PF00270	DEAD/DEAH box helicase
C3D92_RS00880	PF00271	Helicase conserved C-terminal domain
C3D92_RS00885	PF01810	LysE type translocator
C3D92_RS00890	PF16658	Class II release factor RF3, C-terminal domain
C3D92_RS00890	PF03144	Elongation factor Tu domain 2
C3D92_RS00890	PF00009	Elongation factor Tu GTP binding domain
C3D92_RS00900	PF00210	Ferritin-like domain
C3D92_RS00930	PF00581	Rhodanese-like domain
C3D92_RS00930	PF17773	UPF0176 acylphosphatase like domain
C3D92_RS00935	PF01588	Putative tRNA binding domain
C3D92_RS00935	PF09334	tRNA synthetases class I (M)
C3D92_RS00945	PF10609	NUBPL iron-transfer P-loop NTPase
C3D92_RS00960	PF00692	dUTPase
C3D92_RS00985	PF01276	Orn/Lys/Arg decarboxylase, major domain
C3D92_RS00985	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
C3D92_RS00985	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
C3D92_RS01000	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
C3D92_RS01000	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
C3D92_RS01005	PF02535	ZIP Zinc transporter
C3D92_RS01010	PF01571	Aminomethyltransferase folate-binding domain
C3D92_RS01010	PF08669	Glycine cleavage T-protein C-terminal barrel domain
C3D92_RS01015	PF01597	Glycine cleavage H-protein
C3D92_RS01020	PF02347	Glycine cleavage system P-protein
C3D92_RS01025	PF07729	FCD domain
C3D92_RS01025	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS01030	PF02515	CoA-transferase family III
C3D92_RS01060	PF12146	Serine aminopeptidase, S33
C3D92_RS01070	PF02426	Muconolactone delta-isomerase
C3D92_RS01075	PF01144	Coenzyme A transferase
C3D92_RS01080	PF01144	Coenzyme A transferase
C3D92_RS01085	PF09339	IclR helix-turn-helix domain
C3D92_RS01085	PF01614	Bacterial transcriptional regulator
C3D92_RS01095	PF02667	Short chain fatty acid transporter
C3D92_RS01100	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3D92_RS01100	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3D92_RS01105	PF00082	Subtilase family
C3D92_RS01105	PF03797	Autotransporter beta-domain
C3D92_RS01110	PF00311	Phosphoenolpyruvate carboxylase
C3D92_RS01115	PF06508	Queuosine biosynthesis protein QueC
C3D92_RS01145	PF01565	FAD binding domain 
C3D92_RS01145	PF02913	FAD linked oxidases, C-terminal domain
C3D92_RS01150	PF00171	Aldehyde dehydrogenase family
C3D92_RS01155	PF13667	ThiC-associated domain 
C3D92_RS01155	PF01964	Radical SAM ThiC family
C3D92_RS01160	PF02355	Protein export membrane protein
C3D92_RS01160	PF07549	SecD/SecF GG Motif
C3D92_RS01165	PF09518	HindIII restriction endonuclease
C3D92_RS01195	PF02627	Carboxymuconolactone decarboxylase family
C3D92_RS01205	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS01205	PF07702	UTRA domain
C3D92_RS01210	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS01215	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS01225	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS01230	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
C3D92_RS01235	PF12626	Polymerase A arginine-rich C-terminus
C3D92_RS01235	PF01743	Poly A polymerase head domain
C3D92_RS01235	PF12627	Probable RNA and SrmB- binding site of polymerase A
C3D92_RS01245	PF00308	Bacterial dnaA  protein
C3D92_RS01250	PF00586	AIR synthase related protein, N-terminal domain
C3D92_RS01250	PF02769	AIR synthase related protein, C-terminal domain
C3D92_RS01260	PF08676	MutL C terminal dimerisation domain
C3D92_RS01260	PF01119	DNA mismatch repair protein, C-terminal domain
C3D92_RS01265	PF09335	SNARE associated Golgi protein
C3D92_RS01270	PF11741	AMIN domain
C3D92_RS01270	PF01520	N-acetylmuramoyl-L-alanine amidase
C3D92_RS01275	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
C3D92_RS01280	PF00206	Lyase
C3D92_RS01280	PF10415	Fumarase C C-terminus
C3D92_RS01290	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS01295	PF03466	LysR substrate binding domain
C3D92_RS01295	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS01305	PF02515	CoA-transferase family III
C3D92_RS01310	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS01345	PF01654	Cytochrome bd terminal oxidase subunit I
C3D92_RS01350	PF02322	Cytochrome bd terminal oxidase subunit II
C3D92_RS01355	PF08173	Membrane bound YbgT-like protein
C3D92_RS01360	PF00005	ABC transporter
C3D92_RS01360	PF00664	ABC transporter transmembrane region
C3D92_RS01365	PF00664	ABC transporter transmembrane region
C3D92_RS01365	PF00005	ABC transporter
C3D92_RS01370	PF00156	Phosphoribosyl transferase domain
C3D92_RS01415	PF04386	Stringent starvation protein B
C3D92_RS01420	PF00043	Glutathione S-transferase, C-terminal domain
C3D92_RS01420	PF02798	Glutathione S-transferase, N-terminal domain
C3D92_RS01425	PF02167	Cytochrome C1 family
C3D92_RS01430	PF00033	Cytochrome b/b6/petB
C3D92_RS01430	PF00032	Cytochrome b(C-terminal)/b6/petD
C3D92_RS01435	PF00355	Rieske [2Fe-2S] domain
C3D92_RS01435	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
C3D92_RS01440	PF01741	Large-conductance mechanosensitive channel, MscL
C3D92_RS01445	PF01784	NIF3 (NGG1p interacting factor 3)
C3D92_RS01450	PF13180	PDZ domain
C3D92_RS01460	PF04299	Putative FMN-binding domain
C3D92_RS01465	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3D92_RS01470	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS01475	PF07859	alpha/beta hydrolase fold
C3D92_RS01485	PF08502	LeuA allosteric (dimerisation) domain
C3D92_RS01485	PF00682	HMGL-like
C3D92_RS01490	PF12833	Helix-turn-helix domain
C3D92_RS01495	PF00920	Dehydratase family
C3D92_RS01500	PF07690	Major Facilitator Superfamily
C3D92_RS01505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS01505	PF03466	LysR substrate binding domain
C3D92_RS01515	PF06941	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
C3D92_RS01545	PF07859	alpha/beta hydrolase fold
C3D92_RS01555	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS01560	PF11862	Domain of unknown function (DUF3382)
C3D92_RS01560	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS01565	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS01565	PF00005	ABC transporter
C3D92_RS01570	PF00005	ABC transporter
C3D92_RS01585	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS01590	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS01590	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS01590	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS01595	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS01595	PF00501	AMP-binding enzyme
C3D92_RS01615	PF00202	Aminotransferase class-III
C3D92_RS01620	PF02581	Thiamine monophosphate synthase
C3D92_RS01625	PF08543	Phosphomethylpyrimidine kinase
C3D92_RS01630	PF00301	Rubredoxin
C3D92_RS01635	PF02622	Uncharacterized ACR, COG1678
C3D92_RS01640	PF03652	Holliday junction resolvase
C3D92_RS01645	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
C3D92_RS01645	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
C3D92_RS01650	PF01979	Amidohydrolase family
C3D92_RS01655	PF01553	Acyltransferase
C3D92_RS01660	PF00149	Calcineurin-like phosphoesterase
C3D92_RS01670	PF00912	Transglycosylase
C3D92_RS01685	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS01685	PF00501	AMP-binding enzyme
C3D92_RS01690	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS01705	PF12706	Beta-lactamase superfamily domain
C3D92_RS01710	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS01725	PF11737	Protein of unknown function (DUF3300)
C3D92_RS01735	PF00563	EAL domain
C3D92_RS01735	PF00990	Diguanylate cyclase, GGDEF domain
C3D92_RS01735	PF03707	Bacterial signalling protein N terminal repeat
C3D92_RS01740	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
C3D92_RS01740	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
C3D92_RS01745	PF13532	2OG-Fe(II) oxygenase superfamily
C3D92_RS01750	PF09859	Oxygenase, catalysing oxidative methylation of damaged DNA
C3D92_RS01755	PF04463	Protein of unknown function (DUF523)
C3D92_RS01760	PF00005	ABC transporter
C3D92_RS01765	PF01032	FecCD transport family
C3D92_RS01770	PF01497	Periplasmic binding protein
C3D92_RS01775	PF05171	Haemin-degrading HemS.ChuX domain
C3D92_RS01780	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS01780	PF00593	TonB dependent receptor
C3D92_RS01780	PF04886	PT repeat
C3D92_RS01785	PF04773	FecR protein
C3D92_RS01785	PF16220	Domain of unknown function (DUF4880)
C3D92_RS01790	PF04542	Sigma-70 region 2 
C3D92_RS01790	PF08281	Sigma-70, region 4
C3D92_RS01815	PF02423	Ornithine cyclodeaminase/mu-crystallin family
C3D92_RS01825	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS01825	PF07729	FCD domain
C3D92_RS01845	PF00171	Aldehyde dehydrogenase family
C3D92_RS01855	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS01855	PF00970	Oxidoreductase FAD-binding domain
C3D92_RS01855	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS01880	PF03458	UPF0126 domain
C3D92_RS01885	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
C3D92_RS01885	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C3D92_RS01890	PF03372	Endonuclease/Exonuclease/phosphatase family
C3D92_RS01895	PF00156	Phosphoribosyl transferase domain
C3D92_RS01900	PF02637	GatB domain
C3D92_RS01900	PF02934	GatB/GatE catalytic domain
C3D92_RS01905	PF01425	Amidase
C3D92_RS01910	PF02686	Glu-tRNAGln amidotransferase C subunit
C3D92_RS01920	PF04085	rod shape-determining protein MreC
C3D92_RS01930	PF03717	Penicillin-binding Protein dimerisation domain
C3D92_RS01930	PF00905	Penicillin binding protein transpeptidase domain
C3D92_RS01935	PF01098	Cell cycle protein
C3D92_RS01940	PF02615	Malate/L-lactate dehydrogenase
C3D92_RS01945	PF00939	Sodium:sulfate symporter transmembrane region
C3D92_RS01950	PF00440	Bacterial regulatory proteins, tetR family
C3D92_RS01960	PF00696	Amino acid kinase family
C3D92_RS01965	PF03180	NLPA lipoprotein
C3D92_RS01970	PF00578	AhpC/TSA family
C3D92_RS01975	PF04972	BON domain
C3D92_RS01980	PF13580	SIS domain
C3D92_RS01985	PF02021	Uncharacterised protein family UPF0102
C3D92_RS01990	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3D92_RS01995	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
C3D92_RS01995	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
C3D92_RS02015	PF02515	CoA-transferase family III
C3D92_RS02020	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02025	PF02515	CoA-transferase family III
C3D92_RS02040	PF09339	IclR helix-turn-helix domain
C3D92_RS02045	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS02055	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02060	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3D92_RS02060	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3D92_RS02060	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS02065	PF02515	CoA-transferase family III
C3D92_RS02070	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS02070	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS02070	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS02075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS02075	PF03466	LysR substrate binding domain
C3D92_RS02085	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02095	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02110	PF00892	EamA-like transporter family
C3D92_RS02115	PF01810	LysE type translocator
C3D92_RS02120	PF12146	Serine aminopeptidase, S33
C3D92_RS02140	PF13231	Dolichyl-phosphate-mannose-protein mannosyltransferase
C3D92_RS02145	PF00535	Glycosyl transferase family 2
C3D92_RS02160	PF03616	Sodium/glutamate symporter
C3D92_RS02170	PF02667	Short chain fatty acid transporter
C3D92_RS02185	PF00929	Exonuclease
C3D92_RS02215	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02220	PF03466	LysR substrate binding domain
C3D92_RS02220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS02225	PF01565	FAD binding domain 
C3D92_RS02225	PF09330	D-lactate dehydrogenase, membrane binding
C3D92_RS02230	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS02230	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS02230	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS02235	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS02235	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS02235	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS02240	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02245	PF07687	Peptidase dimerisation domain
C3D92_RS02245	PF01546	Peptidase family M20/M25/M40
C3D92_RS02255	PF01042	Endoribonuclease L-PSP
C3D92_RS02265	PF00107	Zinc-binding dehydrogenase
C3D92_RS02265	PF08240	Alcohol dehydrogenase GroES-like domain
C3D92_RS02270	PF03466	LysR substrate binding domain
C3D92_RS02270	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS02275	PF13380	CoA binding domain
C3D92_RS02275	PF13607	Succinyl-CoA ligase like flavodoxin domain
C3D92_RS02280	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS02290	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02295	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
C3D92_RS02300	PF01380	SIS domain
C3D92_RS02305	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS02310	PF02803	Thiolase, C-terminal domain
C3D92_RS02310	PF00108	Thiolase, N-terminal domain
C3D92_RS02315	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS02315	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3D92_RS02315	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3D92_RS02320	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS02320	PF12806	Acetyl-CoA dehydrogenase C-terminal like
C3D92_RS02320	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS02320	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS02325	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02330	PF13380	CoA binding domain
C3D92_RS02330	PF00583	Acetyltransferase (GNAT) family
C3D92_RS02330	PF13607	Succinyl-CoA ligase like flavodoxin domain
C3D92_RS02345	PF01568	Molydopterin dinucleotide binding domain
C3D92_RS02345	PF00384	Molybdopterin oxidoreductase
C3D92_RS02365	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
C3D92_RS02365	PF01488	Shikimate / quinate 5-dehydrogenase
C3D92_RS02365	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
C3D92_RS02370	PF00472	RF-1 domain
C3D92_RS02370	PF03462	PCRF domain
C3D92_RS02375	PF05175	Methyltransferase small domain
C3D92_RS02375	PF17827	PrmC N-terminal domain
C3D92_RS02380	PF00462	Glutaredoxin
C3D92_RS02385	PF02441	Flavoprotein
C3D92_RS02390	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02395	PF09084	NMT1/THI5 like
C3D92_RS02400	PF00941	FAD binding domain in molybdopterin dehydrogenase
C3D92_RS02400	PF03450	CO dehydrogenase flavoprotein C-terminal domain
C3D92_RS02405	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C3D92_RS02405	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
C3D92_RS02425	PF03330	Lytic transglycolase
C3D92_RS02425	PF05036	Sporulation related domain
C3D92_RS02430	PF03668	P-loop ATPase protein family
C3D92_RS02440	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
C3D92_RS02440	PF00034	Cytochrome c
C3D92_RS02440	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3D92_RS02445	PF02603	HPr Serine kinase N terminus
C3D92_RS02445	PF07475	HPr Serine kinase C-terminal domain
C3D92_RS02450	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
C3D92_RS02460	PF00005	ABC transporter
C3D92_RS02480	PF01380	SIS domain
C3D92_RS02480	PF00571	CBS domain
C3D92_RS02485	PF01370	NAD dependent epimerase/dehydratase family
C3D92_RS02485	PF02222	ATP-grasp domain
C3D92_RS02520	PF01336	OB-fold nucleic acid binding domain
C3D92_RS02520	PF00152	tRNA synthetases class II (D, K and N) 
C3D92_RS02520	PF02938	GAD domain
C3D92_RS02525	PF03372	Endonuclease/Exonuclease/phosphatase family
C3D92_RS02530	PF13091	PLD-like domain
C3D92_RS02555	PF13458	Periplasmic binding protein
C3D92_RS02560	PF01425	Amidase
C3D92_RS02565	PF05995	Cysteine dioxygenase type I
C3D92_RS02570	PF09339	IclR helix-turn-helix domain
C3D92_RS02570	PF01614	Bacterial transcriptional regulator
C3D92_RS02580	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3D92_RS02580	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3D92_RS02580	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS02585	PF05275	Copper resistance protein B precursor (CopB)
C3D92_RS02590	PF07731	Multicopper oxidase
C3D92_RS02590	PF00394	Multicopper oxidase
C3D92_RS02590	PF07732	Multicopper oxidase
C3D92_RS02630	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS02630	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS02630	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS02645	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS02650	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS02655	PF01256	Carbohydrate kinase
C3D92_RS02675	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS02680	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS02680	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3D92_RS02685	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS02685	PF00005	ABC transporter
C3D92_RS02695	PF07687	Peptidase dimerisation domain
C3D92_RS02695	PF01546	Peptidase family M20/M25/M40
C3D92_RS02705	PF13361	UvrD-like helicase C-terminal domain
C3D92_RS02705	PF00580	UvrD/REP helicase N-terminal domain
C3D92_RS02710	PF17764	3′ DNA-binding domain (3′BD)
C3D92_RS02710	PF18074	Primosomal protein N C-terminal domain
C3D92_RS02710	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
C3D92_RS02710	PF00271	Helicase conserved C-terminal domain
C3D92_RS02710	PF00270	DEAD/DEAH box helicase
C3D92_RS02715	PF01208	Uroporphyrinogen decarboxylase (URO-D)
C3D92_RS02725	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
C3D92_RS02730	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3D92_RS02730	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3D92_RS02735	PF00231	ATP synthase
C3D92_RS02740	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3D92_RS02740	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3D92_RS02740	PF00306	ATP synthase alpha/beta chain, C terminal domain
C3D92_RS02745	PF00213	ATP synthase delta (OSCP) subunit
C3D92_RS02750	PF00430	ATP synthase B/B' CF(0)
C3D92_RS02755	PF00137	ATP synthase subunit C
C3D92_RS02760	PF00119	ATP synthase A chain
C3D92_RS02785	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS02790	PF17820	PDZ domain
C3D92_RS02790	PF13180	PDZ domain
C3D92_RS02795	PF13192	Thioredoxin domain
C3D92_RS02795	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS02805	PF01171	PP-loop family
C3D92_RS02815	PF01842	ACT domain
C3D92_RS02815	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3D92_RS02815	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3D92_RS02820	PF13098	Thioredoxin-like domain
C3D92_RS02820	PF10411	Disulfide bond isomerase protein N-terminus
C3D92_RS02825	PF01494	FAD binding domain
C3D92_RS02830	PF06725	3D domain
C3D92_RS02830	PF03562	MltA specific insert domain
C3D92_RS02835	PF04379	ApaG domain 
C3D92_RS02840	PF00834	Ribulose-phosphate 3 epimerase family
C3D92_RS02845	PF13419	Haloacid dehalogenase-like hydrolase
C3D92_RS02850	PF04715	Anthranilate synthase component I, N terminal region
C3D92_RS02850	PF00425	chorismate binding enzyme
C3D92_RS02855	PF00117	Glutamine amidotransferase class-I
C3D92_RS02860	PF02885	Glycosyl transferase family, helical bundle domain
C3D92_RS02860	PF00591	Glycosyl transferase family, a/b domain
C3D92_RS02865	PF00218	Indole-3-glycerol phosphate synthase
C3D92_RS02890	PF03466	LysR substrate binding domain
C3D92_RS02890	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS02895	PF00551	Formyl transferase
C3D92_RS02905	PF01613	Flavin reductase like domain
C3D92_RS02910	PF01243	Pyridoxamine 5'-phosphate oxidase
C3D92_RS02910	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
C3D92_RS02920	PF07690	Major Facilitator Superfamily
C3D92_RS02925	PF00899	ThiF family
C3D92_RS02930	PF07702	UTRA domain
C3D92_RS02930	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS02935	PF00501	AMP-binding enzyme
C3D92_RS02935	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS02940	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS02955	PF01063	Amino-transferase class IV
C3D92_RS02960	PF00425	chorismate binding enzyme
C3D92_RS02960	PF04715	Anthranilate synthase component I, N terminal region
C3D92_RS02965	PF17760	UvrA interaction domain
C3D92_RS02965	PF00005	ABC transporter
C3D92_RS02965	PF17755	UvrA DNA-binding domain
C3D92_RS02975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS02975	PF03466	LysR substrate binding domain
C3D92_RS02980	PF00535	Glycosyl transferase family 2
C3D92_RS02985	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS02990	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS03025	PF03776	Septum formation topological specificity factor MinE
C3D92_RS03030	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
C3D92_RS03035	PF03775	Septum formation inhibitor MinC, C-terminal domain
C3D92_RS03035	PF05209	Septum formation inhibitor MinC, N-terminal domain
C3D92_RS03040	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
C3D92_RS03040	PF00749	tRNA synthetases class I (E and Q), catalytic domain
C3D92_RS03045	PF01654	Cytochrome bd terminal oxidase subunit I
C3D92_RS03055	PF13493	Domain of unknown function (DUF4118)
C3D92_RS03055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS03055	PF02702	Osmosensitive K+ channel His kinase sensor domain
C3D92_RS03060	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS03060	PF00072	Response regulator receiver domain
C3D92_RS03075	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS03080	PF04391	Protein of unknown function (DUF533)
C3D92_RS03100	PF01476	LysM domain
C3D92_RS03100	PF01464	Transglycosylase SLT domain
C3D92_RS03105	PF16123	Hydroxyacylglutathione hydrolase C-terminus
C3D92_RS03105	PF00753	Metallo-beta-lactamase superfamily
C3D92_RS03110	PF08241	Methyltransferase domain
C3D92_RS03115	PF00075	RNase H
C3D92_RS03165	PF01575	MaoC like domain
C3D92_RS03180	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS03185	PF00106	short chain dehydrogenase
C3D92_RS03195	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS03195	PF00005	ABC transporter
C3D92_RS03200	PF00005	ABC transporter
C3D92_RS03205	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS03215	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS03215	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS03215	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS03220	PF08361	MAATS-type transcriptional repressor, C-terminal region
C3D92_RS03220	PF00440	Bacterial regulatory proteins, tetR family
C3D92_RS03225	PF00501	AMP-binding enzyme
C3D92_RS03225	PF14535	AMP-binding enzyme C-terminal domain
C3D92_RS03230	PF02515	CoA-transferase family III
C3D92_RS03250	PF04285	Protein of unknown function (DUF444)
C3D92_RS03255	PF04293	SpoVR like protein
C3D92_RS03270	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS03275	PF07476	Methylaspartate ammonia-lyase C-terminus
C3D92_RS03275	PF05034	Methylaspartate ammonia-lyase N-terminus
C3D92_RS03280	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS03280	PF07702	UTRA domain
C3D92_RS03300	PF00376	MerR family regulatory protein
C3D92_RS03300	PF09278	MerR, DNA binding
C3D92_RS03310	PF01774	UreD urease accessory protein
C3D92_RS03315	PF00547	Urease, gamma subunit
C3D92_RS03320	PF04955	HupE / UreJ protein
C3D92_RS03325	PF00699	Urease beta subunit
C3D92_RS03330	PF00449	Urease alpha-subunit, N-terminal domain
C3D92_RS03330	PF01979	Amidohydrolase family
C3D92_RS03335	PF02814	UreE urease accessory protein, N-terminal domain
C3D92_RS03335	PF05194	UreE urease accessory protein, C-terminal domain
C3D92_RS03340	PF01730	UreF
C3D92_RS03345	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3D92_RS03355	PF07364	Metallopeptidase family M81
C3D92_RS03355	PF07171	MlrC C-terminus
C3D92_RS03365	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS03370	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS03375	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS03385	PF00202	Aminotransferase class-III
C3D92_RS03390	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS03390	PF00155	Aminotransferase class I and II
C3D92_RS03395	PF00186	Dihydrofolate reductase
C3D92_RS03400	PF00303	Thymidylate synthase
C3D92_RS03410	PF03232	Ubiquinone biosynthesis protein COQ7
C3D92_RS03415	PF00953	Glycosyl transferase family 4
C3D92_RS03420	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3D92_RS03420	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3D92_RS03420	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3D92_RS03425	PF01370	NAD dependent epimerase/dehydratase family
C3D92_RS03430	PF03023	Lipid II flippase MurJ
C3D92_RS03435	PF13439	Glycosyltransferase Family 4
C3D92_RS03435	PF00534	Glycosyl transferases group 1
C3D92_RS03440	PF00733	Asparagine synthase
C3D92_RS03440	PF13537	Glutamine amidotransferase domain
C3D92_RS03445	PF00534	Glycosyl transferases group 1
C3D92_RS03445	PF13439	Glycosyltransferase Family 4
C3D92_RS03450	PF00534	Glycosyl transferases group 1
C3D92_RS03450	PF13439	Glycosyltransferase Family 4
C3D92_RS03455	PF13477	Glycosyl transferase 4-like
C3D92_RS03455	PF00534	Glycosyl transferases group 1
C3D92_RS03460	PF00342	Phosphoglucose isomerase
C3D92_RS03465	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
C3D92_RS03465	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
C3D92_RS03465	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
C3D92_RS03465	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
C3D92_RS03475	PF01565	FAD binding domain 
C3D92_RS03475	PF02913	FAD linked oxidases, C-terminal domain
C3D92_RS03480	PF00072	Response regulator receiver domain
C3D92_RS03480	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS03485	PF08521	Two-component sensor kinase N-terminal
C3D92_RS03485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS03485	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS03490	PF00884	Sulfatase
C3D92_RS03500	PF04209	homogentisate 1,2-dioxygenase
C3D92_RS03505	PF03466	LysR substrate binding domain
C3D92_RS03505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS03515	PF01494	FAD binding domain
C3D92_RS03525	PF06827	Zinc finger found in FPG and IleRS
C3D92_RS03525	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
C3D92_RS03525	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
C3D92_RS03535	PF03550	Outer membrane lipoprotein LolB
C3D92_RS03540	PF08544	GHMP kinases C terminal 
C3D92_RS03540	PF00288	GHMP kinases N terminal domain
C3D92_RS03550	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
C3D92_RS03550	PF14572	Phosphoribosyl synthetase-associated domain
C3D92_RS03555	PF01386	Ribosomal L25p family
C3D92_RS03555	PF14693	Ribosomal protein TL5, C-terminal domain
C3D92_RS03560	PF01195	Peptidyl-tRNA hydrolase
C3D92_RS03570	PF01926	50S ribosome-binding GTPase
C3D92_RS03570	PF06071	Protein of unknown function (DUF933)
C3D92_RS03575	PF00589	Phage integrase family
C3D92_RS03575	PF13356	Arm DNA-binding domain
C3D92_RS03610	PF13175	AAA ATPase domain
C3D92_RS03645	PF13361	UvrD-like helicase C-terminal domain
C3D92_RS03645	PF00580	UvrD/REP helicase N-terminal domain
C3D92_RS03665	PF12951	Passenger-associated-transport-repeat
C3D92_RS03675	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS03675	PF00072	Response regulator receiver domain
C3D92_RS03690	PF17938	Tetracyclin repressor-like, C-terminal domain
C3D92_RS03690	PF00440	Bacterial regulatory proteins, tetR family
C3D92_RS03720	PF01266	FAD dependent oxidoreductase
C3D92_RS03735	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS03790	PF00561	alpha/beta hydrolase fold
C3D92_RS03800	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS03805	PF03459	TOBE domain
C3D92_RS03805	PF00005	ABC transporter
C3D92_RS03810	PF13091	PLD-like domain
C3D92_RS03820	PF03167	Uracil DNA glycosylase superfamily
C3D92_RS03825	PF00271	Helicase conserved C-terminal domain
C3D92_RS03825	PF00270	DEAD/DEAH box helicase
C3D92_RS03835	PF12627	Probable RNA and SrmB- binding site of polymerase A
C3D92_RS03835	PF01743	Poly A polymerase head domain
C3D92_RS03840	PF14718	Soluble lytic murein transglycosylase L domain
C3D92_RS03840	PF01464	Transglycosylase SLT domain
C3D92_RS03850	PF00083	Sugar (and other) transporter
C3D92_RS03850	PF07690	Major Facilitator Superfamily
C3D92_RS03855	PF00850	Histone deacetylase domain
C3D92_RS03860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS03860	PF03466	LysR substrate binding domain
C3D92_RS03870	PF02219	Methylenetetrahydrofolate reductase
C3D92_RS03875	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
C3D92_RS03880	PF05221	S-adenosyl-L-homocysteine hydrolase
C3D92_RS03880	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
C3D92_RS03885	PF00534	Glycosyl transferases group 1
C3D92_RS03885	PF13439	Glycosyltransferase Family 4
C3D92_RS03895	PF02773	S-adenosylmethionine synthetase, C-terminal domain
C3D92_RS03895	PF02772	S-adenosylmethionine synthetase, central domain
C3D92_RS03895	PF00438	S-adenosylmethionine synthetase, N-terminal domain
C3D92_RS03905	PF03279	Bacterial lipid A biosynthesis acyltransferase
C3D92_RS03910	PF01678	Diaminopimelate epimerase
C3D92_RS03920	PF00589	Phage integrase family
C3D92_RS03920	PF02899	Phage integrase, N-terminal SAM-like domain
C3D92_RS03925	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS03925	PF00593	TonB dependent receptor
C3D92_RS03930	PF03824	High-affinity nickel-transport protein
C3D92_RS03940	PF01297	Zinc-uptake complex component A periplasmic
C3D92_RS03945	PF00950	ABC 3 transport family
C3D92_RS03950	PF00005	ABC transporter
C3D92_RS03955	PF01475	Ferric uptake regulator family
C3D92_RS03960	PF07683	Cobalamin synthesis protein cobW C-terminal domain
C3D92_RS03960	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3D92_RS03965	PF01258	Prokaryotic dksA/traR C4-type zinc finger
C3D92_RS03970	PF00227	Proteasome subunit
C3D92_RS03975	PF00004	ATPase family associated with various cellular activities (AAA)
C3D92_RS03975	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3D92_RS03975	PF07724	AAA domain (Cdc48 subfamily)
C3D92_RS03990	PF01923	Cobalamin adenosyltransferase
C3D92_RS04010	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
C3D92_RS04010	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3D92_RS04020	PF01970	Tripartite tricarboxylate transporter TctA family
C3D92_RS04060	PF01790	Prolipoprotein diacylglyceryl transferase
C3D92_RS04065	PF00920	Dehydratase family
C3D92_RS04070	PF00034	Cytochrome c
C3D92_RS04075	PF01625	Peptide methionine sulfoxide reductase
C3D92_RS04080	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3D92_RS04085	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS04125	PF01546	Peptidase family M20/M25/M40
C3D92_RS04125	PF07687	Peptidase dimerisation domain
C3D92_RS04130	PF01979	Amidohydrolase family
C3D92_RS04135	PF12848	ABC transporter
C3D92_RS04135	PF00005	ABC transporter
C3D92_RS04135	PF16326	ABC transporter C-terminal domain
C3D92_RS04145	PF02381	MraZ protein, putative antitoxin-like
C3D92_RS04150	PF01795	MraW methylase family
C3D92_RS04155	PF04999	Cell division protein FtsL
C3D92_RS04160	PF00905	Penicillin binding protein transpeptidase domain
C3D92_RS04160	PF03717	Penicillin-binding Protein dimerisation domain
C3D92_RS04165	PF08245	Mur ligase middle domain
C3D92_RS04165	PF02875	Mur ligase family, glutamate ligase domain
C3D92_RS04170	PF00953	Glycosyl transferase family 4
C3D92_RS04175	PF08245	Mur ligase middle domain
C3D92_RS04175	PF02875	Mur ligase family, glutamate ligase domain
C3D92_RS04180	PF01098	Cell cycle protein
C3D92_RS04185	PF03033	Glycosyltransferase family 28 N-terminal domain
C3D92_RS04185	PF04101	Glycosyltransferase family 28 C-terminal domain
C3D92_RS04190	PF01225	Mur ligase family, catalytic domain
C3D92_RS04190	PF08245	Mur ligase middle domain
C3D92_RS04190	PF02875	Mur ligase family, glutamate ligase domain
C3D92_RS04195	PF07478	D-ala D-ala ligase C-terminus
C3D92_RS04195	PF01820	D-ala D-ala ligase N-terminus
C3D92_RS04200	PF03799	Cell division protein FtsQ
C3D92_RS04200	PF08478	POTRA domain, FtsQ-type
C3D92_RS04205	PF02491	SHS2 domain inserted in FTSA
C3D92_RS04210	PF00091	Tubulin/FtsZ family, GTPase domain
C3D92_RS04210	PF12327	FtsZ family, C-terminal domain
C3D92_RS04215	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
C3D92_RS04225	PF01476	LysM domain
C3D92_RS04225	PF08525	Opacity-associated protein A N-terminal motif
C3D92_RS04225	PF01551	Peptidase family M23
C3D92_RS04230	PF07517	SecA DEAD-like domain
C3D92_RS04230	PF01043	SecA preprotein cross-linking domain
C3D92_RS04230	PF07516	SecA Wing and Scaffold domain
C3D92_RS04230	PF02810	SEC-C motif
C3D92_RS04240	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS04250	PF00106	short chain dehydrogenase
C3D92_RS04255	PF01266	FAD dependent oxidoreductase
C3D92_RS04260	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS04270	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
C3D92_RS04280	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
C3D92_RS04280	PF01488	Shikimate / quinate 5-dehydrogenase
C3D92_RS04280	PF08501	Shikimate dehydrogenase substrate binding domain
C3D92_RS04290	PF00773	RNB domain
C3D92_RS04295	PF05728	Uncharacterised protein family (UPF0227)
C3D92_RS04300	PF08245	Mur ligase middle domain
C3D92_RS04300	PF02875	Mur ligase family, glutamate ligase domain
C3D92_RS04300	PF01225	Mur ligase family, catalytic domain
C3D92_RS04305	PF08534	Redoxin
C3D92_RS04310	PF01220	Dehydroquinase class II
C3D92_RS04315	PF00364	Biotin-requiring enzyme
C3D92_RS04320	PF02785	Biotin carboxylase C-terminal domain
C3D92_RS04320	PF00289	Biotin carboxylase, N-terminal domain
C3D92_RS04320	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3D92_RS04335	PF00294	pfkB family carbohydrate kinase
C3D92_RS04360	PF03062	MBOAT, membrane-bound O-acyltransferase family
C3D92_RS04365	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS04365	PF00501	AMP-binding enzyme
C3D92_RS04380	PF00268	Ribonucleotide reductase, small chain
C3D92_RS04385	PF02867	Ribonucleotide reductase, barrel domain
C3D92_RS04385	PF03477	ATP cone domain
C3D92_RS04385	PF00317	Ribonucleotide reductase, all-alpha domain
C3D92_RS04400	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS04415	PF00749	tRNA synthetases class I (E and Q), catalytic domain
C3D92_RS04420	PF00583	Acetyltransferase (GNAT) family
C3D92_RS04420	PF13380	CoA binding domain
C3D92_RS04420	PF13607	Succinyl-CoA ligase like flavodoxin domain
C3D92_RS04435	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS04435	PF07729	FCD domain
C3D92_RS04445	PF03880	DbpA RNA binding domain   
C3D92_RS04445	PF00270	DEAD/DEAH box helicase
C3D92_RS04445	PF00271	Helicase conserved C-terminal domain
C3D92_RS04450	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3D92_RS04455	PF00857	Isochorismatase family
C3D92_RS04460	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS04465	PF00005	ABC transporter
C3D92_RS04475	PF02230	Phospholipase/Carboxylesterase
C3D92_RS04480	PF04751	Protein of unknown function (DUF615)
C3D92_RS04485	PF01523	Putative modulator of DNA gyrase
C3D92_RS04490	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS04495	PF00572	Ribosomal protein L13
C3D92_RS04500	PF00380	Ribosomal protein S9/S16
C3D92_RS04505	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3D92_RS04505	PF02774	Semialdehyde dehydrogenase, dimerisation domain
C3D92_RS04515	PF01521	Iron-sulphur cluster biosynthesis
C3D92_RS04520	PF03702	Anhydro-N-acetylmuramic acid kinase
C3D92_RS04525	PF01551	Peptidase family M23
C3D92_RS04525	PF08460	Bacterial SH3 domain
C3D92_RS04535	PF00579	tRNA synthetases class I (W and Y)
C3D92_RS04535	PF01479	S4 domain
C3D92_RS04545	PF00464	Serine hydroxymethyltransferase
C3D92_RS04550	PF03477	ATP cone domain
C3D92_RS04565	PF01872	RibD C-terminal domain
C3D92_RS04565	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3D92_RS04585	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS04585	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS04585	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS04585	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS04585	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS04585	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS04595	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS04600	PF03466	LysR substrate binding domain
C3D92_RS04600	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS04605	PF02515	CoA-transferase family III
C3D92_RS04625	PF05726	Pirin C-terminal cupin domain
C3D92_RS04625	PF02678	Pirin
C3D92_RS04640	PF00072	Response regulator receiver domain
C3D92_RS04645	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
C3D92_RS04645	PF06481	COX Aromatic Rich Motif
C3D92_RS04650	PF00115	Cytochrome C and Quinol oxidase polypeptide I
C3D92_RS04655	PF00510	Cytochrome c oxidase subunit III
C3D92_RS04660	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
C3D92_RS04665	PF01022	Bacterial regulatory protein, arsR family
C3D92_RS04685	PF05114	Protein of unknown function (DUF692)
C3D92_RS04700	PF00593	TonB dependent receptor
C3D92_RS04700	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS04715	PF01551	Peptidase family M23
C3D92_RS04715	PF01476	LysM domain
C3D92_RS04730	PF04461	Protein of unknown function (DUF520)
C3D92_RS04740	PF08281	Sigma-70, region 4
C3D92_RS04740	PF04542	Sigma-70 region 2 
C3D92_RS04760	PF00795	Carbon-nitrogen hydrolase
C3D92_RS04765	PF01523	Putative modulator of DNA gyrase
C3D92_RS04770	PF00793	DAHP synthetase I family
C3D92_RS04775	PF13332	Hemagglutinin repeat
C3D92_RS04775	PF05860	haemagglutination activity domain
C3D92_RS04775	PF05594	Haemagluttinin repeat
C3D92_RS04775	PF13018	Extended Signal Peptide of Type V secretion system
C3D92_RS04775	PF05860	haemagglutination activity domain
C3D92_RS04775	PF13332	Hemagglutinin repeat
C3D92_RS04775	PF05594	Haemagluttinin repeat
C3D92_RS04775	PF13018	Extended Signal Peptide of Type V secretion system
C3D92_RS04780	PF02913	FAD linked oxidases, C-terminal domain
C3D92_RS04780	PF01565	FAD binding domain 
C3D92_RS04785	PF01565	FAD binding domain 
C3D92_RS04785	PF02913	FAD linked oxidases, C-terminal domain
C3D92_RS04790	PF01565	FAD binding domain 
C3D92_RS04795	PF13183	4Fe-4S dicluster domain
C3D92_RS04795	PF02754	Cysteine-rich domain
C3D92_RS04800	PF00756	Putative esterase
C3D92_RS04805	PF00593	TonB dependent receptor
C3D92_RS04805	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS04815	PF02233	NAD(P) transhydrogenase beta subunit
C3D92_RS04825	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
C3D92_RS04825	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
C3D92_RS04835	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS04840	PF03466	LysR substrate binding domain
C3D92_RS04840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS04850	PF01925	Sulfite exporter TauE/SafE
C3D92_RS04855	PF13417	Glutathione S-transferase, N-terminal domain
C3D92_RS04855	PF00043	Glutathione S-transferase, C-terminal domain
C3D92_RS04860	PF00206	Lyase
C3D92_RS04860	PF08328	Adenylosuccinate lyase C-terminal
C3D92_RS04865	PF01322	Cytochrome C'
C3D92_RS04885	PF01594	AI-2E family transporter
C3D92_RS04895	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS04895	PF07729	FCD domain
C3D92_RS04905	PF01425	Amidase
C3D92_RS04910	PF02515	CoA-transferase family III
C3D92_RS04915	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS04930	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS04935	PF00005	ABC transporter
C3D92_RS04950	PF01614	Bacterial transcriptional regulator
C3D92_RS04950	PF09339	IclR helix-turn-helix domain
C3D92_RS04960	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS04960	PF00501	AMP-binding enzyme
C3D92_RS04965	PF01042	Endoribonuclease L-PSP
C3D92_RS04970	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS04985	PF00005	ABC transporter
C3D92_RS05005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS05005	PF03466	LysR substrate binding domain
C3D92_RS05015	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3D92_RS05020	PF07690	Major Facilitator Superfamily
C3D92_RS05025	PF03466	LysR substrate binding domain
C3D92_RS05025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS05040	PF01425	Amidase
C3D92_RS05045	PF00677	Lumazine binding domain
C3D92_RS05050	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS05055	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS05055	PF13404	AsnC-type helix-turn-helix domain
C3D92_RS05065	PF00501	AMP-binding enzyme
C3D92_RS05065	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS05075	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS05080	PF00005	ABC transporter
C3D92_RS05095	PF00107	Zinc-binding dehydrogenase
C3D92_RS05095	PF08240	Alcohol dehydrogenase GroES-like domain
C3D92_RS05115	PF00403	Heavy-metal-associated domain
C3D92_RS05120	PF01966	HD domain
C3D92_RS05125	PF00155	Aminotransferase class I and II
C3D92_RS05130	PF03466	LysR substrate binding domain
C3D92_RS05130	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS05140	PF00083	Sugar (and other) transporter
C3D92_RS05160	PF13609	Gram-negative porin
C3D92_RS05165	PF02548	Ketopantoate hydroxymethyltransferase
C3D92_RS05170	PF03466	LysR substrate binding domain
C3D92_RS05170	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS05235	PF00440	Bacterial regulatory proteins, tetR family
C3D92_RS05245	PF05170	AsmA family
C3D92_RS05250	PF03352	Methyladenine glycosylase
C3D92_RS05255	PF09278	MerR, DNA binding
C3D92_RS05255	PF00376	MerR family regulatory protein
C3D92_RS05270	PF01547	Bacterial extracellular solute-binding protein
C3D92_RS05285	PF00005	ABC transporter
C3D92_RS05285	PF08402	TOBE domain
C3D92_RS05290	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS05295	PF14785	Maltose transport system permease protein MalF P2 domain
C3D92_RS05295	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS05315	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS05320	PF07729	FCD domain
C3D92_RS05320	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS05350	PF00465	Iron-containing alcohol dehydrogenase 
C3D92_RS05365	PF03180	NLPA lipoprotein
C3D92_RS05370	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS05375	PF00005	ABC transporter
C3D92_RS05375	PF09383	NIL domain
C3D92_RS05380	PF13802	Galactose mutarotase-like
C3D92_RS05380	PF01055	Glycosyl hydrolases family 31 
C3D92_RS05390	PF00459	Inositol monophosphatase family
C3D92_RS05405	PF00501	AMP-binding enzyme
C3D92_RS05405	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS05410	PF07687	Peptidase dimerisation domain
C3D92_RS05410	PF01546	Peptidase family M20/M25/M40
C3D92_RS05415	PF03466	LysR substrate binding domain
C3D92_RS05415	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS05420	PF03601	Conserved hypothetical protein 698
C3D92_RS05425	PF03061	Thioesterase superfamily
C3D92_RS05430	PF03448	MgtE intracellular N domain
C3D92_RS05430	PF00571	CBS domain
C3D92_RS05430	PF01769	Divalent cation transporter
C3D92_RS05450	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS05460	PF02609	Exonuclease VII small subunit
C3D92_RS05465	PF00348	Polyprenyl synthetase
C3D92_RS05470	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
C3D92_RS05470	PF02779	Transketolase, pyrimidine binding domain
C3D92_RS05470	PF02780	Transketolase, C-terminal domain
C3D92_RS05475	PF02649	Type I GTP cyclohydrolase folE2
C3D92_RS05480	PF01250	Ribosomal protein S6
C3D92_RS05490	PF01084	Ribosomal protein S18
C3D92_RS05495	PF01281	Ribosomal protein L9, N-terminal domain
C3D92_RS05495	PF03948	Ribosomal protein L9, C-terminal domain
C3D92_RS05505	PF00772	DnaB-like helicase N terminal domain
C3D92_RS05505	PF03796	DnaB-like helicase C terminal domain
C3D92_RS05510	PF13593	SBF-like CPA transporter family (DUF4137)
C3D92_RS05515	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
C3D92_RS05520	PF02562	PhoH-like protein
C3D92_RS05520	PF13638	PIN domain
C3D92_RS05525	PF00578	AhpC/TSA family
C3D92_RS05530	PF04430	Protein of unknown function (DUF498/DUF598)
C3D92_RS05535	PF00155	Aminotransferase class I and II
C3D92_RS05540	PF03447	Homoserine dehydrogenase, NAD binding domain
C3D92_RS05540	PF00742	Homoserine dehydrogenase
C3D92_RS05540	PF01842	ACT domain
C3D92_RS05545	PF00291	Pyridoxal-phosphate dependent enzyme
C3D92_RS05545	PF14821	Threonine synthase N terminus
C3D92_RS05560	PF02615	Malate/L-lactate dehydrogenase
C3D92_RS05590	PF03328	HpcH/HpaI aldolase/citrate lyase family
C3D92_RS05595	PF01649	Ribosomal protein S20
C3D92_RS05605	PF03023	Lipid II flippase MurJ
C3D92_RS05610	PF00106	short chain dehydrogenase
C3D92_RS05615	PF05191	Adenylate kinase, active site lid
C3D92_RS05620	PF02348	Cytidylyltransferase
C3D92_RS05625	PF03966	Trm112p-like protein
C3D92_RS05630	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
C3D92_RS05635	PF02472	Biopolymer transport protein ExbD/TolR
C3D92_RS05640	PF01618	MotA/TolQ/ExbB proton channel family
C3D92_RS05650	PF02601	Exonuclease VII, large subunit
C3D92_RS05650	PF13742	OB-fold nucleic acid binding domain
C3D92_RS05655	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
C3D92_RS05655	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
C3D92_RS05660	PF00654	Voltage gated chloride channel
C3D92_RS05665	PF00108	Thiolase, N-terminal domain
C3D92_RS05665	PF02803	Thiolase, C-terminal domain
C3D92_RS05675	PF00313	'Cold-shock' DNA-binding domain
C3D92_RS05680	PF02617	ATP-dependent Clp protease adaptor protein ClpS
C3D92_RS05685	PF17970	Bacterial Alpha-2-macroglobulin MG1 domain 
C3D92_RS05685	PF00207	Alpha-2-macroglobulin family
C3D92_RS05685	PF01835	MG2 domain
C3D92_RS05685	PF17962	Bacterial macroglobulin domain 6
C3D92_RS05685	PF07703	Alpha-2-macroglobulin bait region domain
C3D92_RS05685	PF17973	Bacterial Alpha-2-macroglobulin MG10 domain
C3D92_RS05685	PF11974	Bacterial alpha-2-macroglobulin MG3 domain
C3D92_RS05685	PF17972	Bacterial Alpha-2-macroglobulin MG5 domain
C3D92_RS05690	PF00905	Penicillin binding protein transpeptidase domain
C3D92_RS05690	PF06832	Penicillin-Binding Protein C-terminus Family
C3D92_RS05690	PF00912	Transglycosylase
C3D92_RS05695	PF00004	ATPase family associated with various cellular activities (AAA)
C3D92_RS05695	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3D92_RS05695	PF07724	AAA domain (Cdc48 subfamily)
C3D92_RS05695	PF02861	Clp amino terminal domain, pathogenicity island component
C3D92_RS05695	PF17871	AAA lid domain
C3D92_RS05700	PF04403	Paraquat-inducible protein A
C3D92_RS05705	PF02470	MlaD protein
C3D92_RS05715	PF00171	Aldehyde dehydrogenase family
C3D92_RS05715	PF01619	Proline dehydrogenase
C3D92_RS05715	PF14850	DNA-binding domain of Proline dehydrogenase
C3D92_RS05715	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
C3D92_RS05725	PF13458	Periplasmic binding protein
C3D92_RS05730	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS05735	PF11862	Domain of unknown function (DUF3382)
C3D92_RS05735	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS05740	PF00005	ABC transporter
C3D92_RS05740	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS05745	PF00005	ABC transporter
C3D92_RS05750	PF07690	Major Facilitator Superfamily
C3D92_RS05755	PF00440	Bacterial regulatory proteins, tetR family
C3D92_RS05770	PF00543	Nitrogen regulatory protein P-II
C3D92_RS05775	PF04380	Membrane fusogenic activity
C3D92_RS05790	PF07690	Major Facilitator Superfamily
C3D92_RS05790	PF00083	Sugar (and other) transporter
C3D92_RS05800	PF00115	Cytochrome C and Quinol oxidase polypeptide I
C3D92_RS05805	PF00510	Cytochrome c oxidase subunit III
C3D92_RS05810	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
C3D92_RS05815	PF02104	SURF1 family
C3D92_RS05840	PF13411	MerR HTH family regulatory protein
C3D92_RS05845	PF00403	Heavy-metal-associated domain
C3D92_RS05865	PF04055	Radical SAM superfamily
C3D92_RS05865	PF06968	Biotin and Thiamin Synthesis associated domain
C3D92_RS05880	PF08534	Redoxin
C3D92_RS05890	PF01738	Dienelactone hydrolase family
C3D92_RS05900	PF01967	MoaC family
C3D92_RS05910	PF02391	MoaE protein
C3D92_RS05915	PF00994	Probable molybdopterin binding domain
C3D92_RS05920	PF03453	MoeA N-terminal region (domain I and II)
C3D92_RS05920	PF03454	MoeA C-terminal region (domain IV)
C3D92_RS05920	PF00994	Probable molybdopterin binding domain
C3D92_RS05925	PF06463	Molybdenum Cofactor Synthesis C
C3D92_RS05925	PF04055	Radical SAM superfamily
C3D92_RS05945	PF14698	Argininosuccinate lyase C-terminal
C3D92_RS05945	PF00206	Lyase
C3D92_RS05950	PF00924	Mechanosensitive ion channel
C3D92_RS05955	PF02540	NAD synthase
C3D92_RS05955	PF00795	Carbon-nitrogen hydrolase
C3D92_RS05960	PF00543	Nitrogen regulatory protein P-II
C3D92_RS05985	PF03466	LysR substrate binding domain
C3D92_RS05985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS05995	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS06000	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS06015	PF03193	RsgA GTPase
C3D92_RS06020	PF01435	Peptidase family M48
C3D92_RS06025	PF00929	Exonuclease
C3D92_RS06030	PF03853	YjeF-related protein N-terminus
C3D92_RS06035	PF07848	PaaX-like protein
C3D92_RS06035	PF08223	PaaX-like protein C-terminal domain
C3D92_RS06040	PF05138	Phenylacetic acid catabolic protein
C3D92_RS06045	PF06243	Phenylacetic acid degradation B
C3D92_RS06050	PF05138	Phenylacetic acid catabolic protein
C3D92_RS06055	PF01883	Iron-sulfur cluster assembly protein
C3D92_RS06075	PF00171	Aldehyde dehydrogenase family
C3D92_RS06080	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS06085	PF03061	Thioesterase superfamily
C3D92_RS06090	PF00501	AMP-binding enzyme
C3D92_RS06090	PF14535	AMP-binding enzyme C-terminal domain
C3D92_RS06095	PF16970	Type-1 fimbrial protein, A
C3D92_RS06115	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS06120	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS06120	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
C3D92_RS06125	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
C3D92_RS06130	PF02769	AIR synthase related protein, C-terminal domain
C3D92_RS06130	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
C3D92_RS06130	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
C3D92_RS06135	PF13018	Extended Signal Peptide of Type V secretion system
C3D92_RS06135	PF05594	Haemagluttinin repeat
C3D92_RS06135	PF05860	haemagglutination activity domain
C3D92_RS06135	PF13332	Hemagglutinin repeat
C3D92_RS06165	PF00596	Class II Aldolase and Adducin N-terminal domain
C3D92_RS06170	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS06175	PF01242	6-pyruvoyl tetrahydropterin synthase
C3D92_RS06185	PF00472	RF-1 domain
C3D92_RS06205	PF00701	Dihydrodipicolinate synthetase family
C3D92_RS06210	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS06235	PF00890	FAD binding domain
C3D92_RS06235	PF14537	Cytochrome c3
C3D92_RS06240	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS06255	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
C3D92_RS06255	PF01266	FAD dependent oxidoreductase
C3D92_RS06260	PF00455	DeoR C terminal sensor domain
C3D92_RS06260	PF08220	DeoR-like helix-turn-helix domain
C3D92_RS06265	PF00005	ABC transporter
C3D92_RS06265	PF17912	MalK OB fold domain
C3D92_RS06275	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS06300	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS06305	PF01266	FAD dependent oxidoreductase
C3D92_RS06310	PF12320	Type 5 capsule protein repressor C-terminal domain
C3D92_RS06310	PF00149	Calcineurin-like phosphoesterase
C3D92_RS06350	PF00478	IMP dehydrogenase / GMP reductase domain
C3D92_RS06350	PF00571	CBS domain
C3D92_RS06355	PF02540	NAD synthase
C3D92_RS06355	PF00958	GMP synthase C terminal domain
C3D92_RS06355	PF00117	Glutamine amidotransferase class-I
C3D92_RS06370	PF07804	HipA-like C-terminal domain
C3D92_RS06370	PF13657	HipA N-terminal domain
C3D92_RS06380	PF07690	Major Facilitator Superfamily
C3D92_RS06395	PF01979	Amidohydrolase family
C3D92_RS06405	PF00005	ABC transporter
C3D92_RS06410	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS06440	PF00916	Sulfate permease family
C3D92_RS06440	PF01740	STAS domain
C3D92_RS06445	PF00753	Metallo-beta-lactamase superfamily
C3D92_RS06445	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
C3D92_RS06445	PF10996	Beta-Casp domain
C3D92_RS06465	PF12706	Beta-lactamase superfamily domain
C3D92_RS06470	PF12833	Helix-turn-helix domain
C3D92_RS06470	PF01965	DJ-1/PfpI family
C3D92_RS06475	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS06475	PF03466	LysR substrate binding domain
C3D92_RS06490	PF00107	Zinc-binding dehydrogenase
C3D92_RS06490	PF08240	Alcohol dehydrogenase GroES-like domain
C3D92_RS06495	PF07690	Major Facilitator Superfamily
C3D92_RS06500	PF00155	Aminotransferase class I and II
C3D92_RS06500	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS06510	PF01810	LysE type translocator
C3D92_RS06520	PF07687	Peptidase dimerisation domain
C3D92_RS06520	PF01546	Peptidase family M20/M25/M40
C3D92_RS06525	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS06530	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS06535	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3D92_RS06535	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS06540	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS06540	PF00005	ABC transporter
C3D92_RS06545	PF00356	Bacterial regulatory proteins, lacI family
C3D92_RS06575	PF09335	SNARE associated Golgi protein
C3D92_RS06590	PF13847	Methyltransferase domain
C3D92_RS06605	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS06605	PF00155	Aminotransferase class I and II
C3D92_RS06615	PF00692	dUTPase
C3D92_RS06625	PF01632	Ribosomal protein L35
C3D92_RS06630	PF00453	Ribosomal protein L20
C3D92_RS06635	PF01409	tRNA synthetases class II core domain (F)
C3D92_RS06635	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
C3D92_RS06640	PF03483	B3/4 domain
C3D92_RS06640	PF03484	tRNA synthetase B5 domain
C3D92_RS06640	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
C3D92_RS06640	PF03147	Ferredoxin-fold anticodon binding domain
C3D92_RS06640	PF01588	Putative tRNA binding domain
C3D92_RS06645	PF00216	Bacterial DNA-binding protein
C3D92_RS06690	PF04231	Endonuclease I
C3D92_RS06710	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
C3D92_RS06710	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
C3D92_RS06715	PF04381	Putative exonuclease, RdgC
C3D92_RS06725	PF02515	CoA-transferase family III
C3D92_RS06730	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS06730	PF03466	LysR substrate binding domain
C3D92_RS06750	PF00106	short chain dehydrogenase
C3D92_RS06760	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS06765	PF00005	ABC transporter
C3D92_RS06765	PF08402	TOBE domain
C3D92_RS06770	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3D92_RS06770	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS06770	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3D92_RS06775	PF00083	Sugar (and other) transporter
C3D92_RS06775	PF08946	Osmosensory transporter coiled coil
C3D92_RS06780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS06780	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS06785	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS06785	PF00072	Response regulator receiver domain
C3D92_RS06790	PF00154	recA bacterial DNA recombination protein
C3D92_RS06795	PF02631	RecX family
C3D92_RS06800	PF03466	LysR substrate binding domain
C3D92_RS06800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS06805	PF08267	Cobalamin-independent synthase, N-terminal domain
C3D92_RS06805	PF01717	Cobalamin-independent synthase, Catalytic domain
C3D92_RS06815	PF08442	ATP-grasp domain
C3D92_RS06815	PF00549	CoA-ligase
C3D92_RS06820	PF02629	CoA binding domain
C3D92_RS06820	PF00549	CoA-ligase
C3D92_RS06825	PF03741	Integral membrane protein TerC family
C3D92_RS06830	PF03741	Integral membrane protein TerC family
C3D92_RS06835	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
C3D92_RS06835	PF03900	Porphobilinogen deaminase, C-terminal domain
C3D92_RS06855	PF00719	Inorganic pyrophosphatase
C3D92_RS06860	PF01557	Fumarylacetoacetate (FAA) hydrolase family
C3D92_RS06895	PF00263	Bacterial type II and III secretion system protein
C3D92_RS06895	PF13629	Pilus formation protein N terminal region
C3D92_RS06895	PF04972	BON domain
C3D92_RS06900	PF00437	Type II/IV secretion system protein
C3D92_RS06915	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS06920	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
C3D92_RS06920	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
C3D92_RS06925	PF02615	Malate/L-lactate dehydrogenase
C3D92_RS06930	PF03466	LysR substrate binding domain
C3D92_RS06930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS06940	PF01266	FAD dependent oxidoreductase
C3D92_RS06945	PF04267	Sarcosine oxidase, delta subunit family 
C3D92_RS06950	PF08669	Glycine cleavage T-protein C-terminal barrel domain
C3D92_RS06950	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS06950	PF17806	Sarcosine oxidase A3 domain
C3D92_RS06950	PF01571	Aminomethyltransferase folate-binding domain
C3D92_RS06960	PF00551	Formyl transferase
C3D92_RS06965	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS06975	PF00561	alpha/beta hydrolase fold
C3D92_RS06985	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
C3D92_RS06985	PF01565	FAD binding domain 
C3D92_RS06990	PF01113	Dihydrodipicolinate reductase, N-terminus
C3D92_RS06990	PF05173	Dihydrodipicolinate reductase, C-terminus
C3D92_RS06995	PF04355	SmpA / OmlA family
C3D92_RS07000	PF01475	Ferric uptake regulator family
C3D92_RS07005	PF02463	RecF/RecN/SMC N terminal domain
C3D92_RS07010	PF01513	ATP-NAD kinase
C3D92_RS07015	PF01628	HrcA protein C terminal domain
C3D92_RS07015	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
C3D92_RS07020	PF00762	Ferrochelatase
C3D92_RS07030	PF01025	GrpE
C3D92_RS07040	PF00012	Hsp70 protein
C3D92_RS07045	PF01556	DnaJ C terminal domain
C3D92_RS07045	PF00226	DnaJ domain
C3D92_RS07045	PF00684	DnaJ central domain
C3D92_RS07050	PF00675	Insulinase (Peptidase family M16)
C3D92_RS07050	PF05193	Peptidase M16 inactive domain
C3D92_RS07070	PF01434	Peptidase family M41
C3D92_RS07070	PF00004	ATPase family associated with various cellular activities (AAA)
C3D92_RS07070	PF17862	AAA+ lid domain
C3D92_RS07080	PF00034	Cytochrome c
C3D92_RS07095	PF00180	Isocitrate/isopropylmalate dehydrogenase
C3D92_RS07115	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS07115	PF00072	Response regulator receiver domain
C3D92_RS07125	PF02669	K+-transporting ATPase, c chain
C3D92_RS07135	PF03814	Potassium-transporting ATPase A subunit
C3D92_RS07150	PF00474	Sodium:solute symporter family
C3D92_RS07165	PF00893	Small Multidrug Resistance protein
C3D92_RS07170	PF00488	MutS domain V
C3D92_RS07170	PF01713	Smr domain
C3D92_RS07175	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS07180	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
C3D92_RS07180	PF17854	FtsK alpha domain
C3D92_RS07180	PF01580	FtsK/SpoIIIE family
C3D92_RS07180	PF09397	Ftsk gamma domain
C3D92_RS07185	PF03548	Outer membrane lipoprotein carrier protein LolA
C3D92_RS07190	PF00004	ATPase family associated with various cellular activities (AAA)
C3D92_RS07190	PF16193	AAA C-terminal domain
C3D92_RS07190	PF12002	MgsA AAA+ ATPase C terminal
C3D92_RS07195	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3D92_RS07195	PF02403	Seryl-tRNA synthetase N-terminal domain
C3D92_RS07220	PF00990	Diguanylate cyclase, GGDEF domain
C3D92_RS07220	PF17151	Periplasmic sensor domain
C3D92_RS07235	PF07660	Secretin and TonB N terminus short domain
C3D92_RS07235	PF00593	TonB dependent receptor
C3D92_RS07235	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS07240	PF07690	Major Facilitator Superfamily
C3D92_RS07260	PF06276	Ferric iron reductase FhuF-like transporter
C3D92_RS07260	PF04183	IucA / IucC family
C3D92_RS07270	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
C3D92_RS07280	PF02254	TrkA-N domain
C3D92_RS07280	PF00999	Sodium/hydrogen exchanger family
C3D92_RS07285	PF00106	short chain dehydrogenase
C3D92_RS07295	PF03883	Peroxide stress protein YaaA
C3D92_RS07315	PF00990	Diguanylate cyclase, GGDEF domain
C3D92_RS07335	PF00196	Bacterial regulatory proteins, luxR family
C3D92_RS07340	PF03129	Anticodon binding domain
C3D92_RS07340	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3D92_RS07340	PF02824	TGS domain
C3D92_RS07340	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3D92_RS07345	PF00707	Translation initiation factor IF-3, C-terminal domain
C3D92_RS07345	PF05198	Translation initiation factor IF-3, N-terminal domain
C3D92_RS07350	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
C3D92_RS07350	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
C3D92_RS07360	PF00381	PTS HPr component phosphorylation site
C3D92_RS07365	PF02896	PEP-utilising enzyme, TIM barrel domain
C3D92_RS07365	PF05524	PEP-utilising enzyme, N-terminal
C3D92_RS07365	PF00391	PEP-utilising enzyme, mobile domain
C3D92_RS07380	PF02423	Ornithine cyclodeaminase/mu-crystallin family
C3D92_RS07390	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS07395	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS07400	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS07405	PF00005	ABC transporter
C3D92_RS07420	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3D92_RS07420	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3D92_RS07430	PF02293	AmiS/UreI family transporter
C3D92_RS07435	PF03069	Acetamidase/Formamidase family
C3D92_RS07450	PF01116	Fructose-bisphosphate aldolase class-II
C3D92_RS07460	PF01259	SAICAR synthetase
C3D92_RS07465	PF15723	Motility quorum-sensing regulator, toxin of MqsA
C3D92_RS07470	PF15731	Antitoxin component of bacterial toxin-antitoxin system, MqsA
C3D92_RS07480	PF02600	Disulfide bond formation protein DsbB
C3D92_RS07485	PF00731	AIR carboxylase
C3D92_RS07490	PF02222	ATP-grasp domain
C3D92_RS07490	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
C3D92_RS07495	PF01300	Telomere recombination
C3D92_RS07495	PF03481	Putative GTP-binding controlling metal-binding
C3D92_RS07500	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS07505	PF09339	IclR helix-turn-helix domain
C3D92_RS07505	PF01614	Bacterial transcriptional regulator
C3D92_RS07510	PF00491	Arginase family
C3D92_RS07515	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS07520	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS07525	PF00005	ABC transporter
C3D92_RS07530	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS07530	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS07540	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS07540	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS07540	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS07545	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS07545	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS07545	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS07550	PF03466	LysR substrate binding domain
C3D92_RS07550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS07555	PF00589	Phage integrase family
C3D92_RS07555	PF02899	Phage integrase, N-terminal SAM-like domain
C3D92_RS07560	PF04073	Aminoacyl-tRNA editing domain
C3D92_RS07565	PF01174	SNO glutamine amidotransferase family
C3D92_RS07580	PF00768	D-alanyl-D-alanine carboxypeptidase
C3D92_RS07590	PF07690	Major Facilitator Superfamily
C3D92_RS07600	PF00580	UvrD/REP helicase N-terminal domain
C3D92_RS07600	PF12705	PD-(D/E)XK nuclease superfamily
C3D92_RS07600	PF13361	UvrD-like helicase C-terminal domain
C3D92_RS07610	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
C3D92_RS07610	PF12170	DNA polymerase III tau subunit V interacting with alpha
C3D92_RS07610	PF12169	DNA polymerase III subunits gamma and tau domain III
C3D92_RS07615	PF02575	YbaB/EbfC DNA-binding family
C3D92_RS07620	PF13662	Toprim domain
C3D92_RS07620	PF02132	RecR protein
C3D92_RS07645	PF04228	Putative neutral zinc metallopeptidase
C3D92_RS07650	PF01300	Telomere recombination
C3D92_RS07690	PF03358	NADPH-dependent FMN reductase
C3D92_RS07695	PF07311	Dodecin
C3D92_RS07700	PF00488	MutS domain V
C3D92_RS07700	PF05192	MutS domain III
C3D92_RS07700	PF05188	MutS domain II
C3D92_RS07700	PF05190	MutS family domain IV
C3D92_RS07700	PF01624	MutS domain I
C3D92_RS07705	PF08007	Cupin superfamily protein
C3D92_RS07710	PF16970	Type-1 fimbrial protein, A
C3D92_RS07715	PF06804	NlpB/DapX lipoprotein
C3D92_RS07720	PF00701	Dihydrodipicolinate synthetase family
C3D92_RS07735	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS07740	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS07745	PF00005	ABC transporter
C3D92_RS07750	PF02824	TGS domain
C3D92_RS07750	PF13291	ACT domain
C3D92_RS07750	PF04607	Region found in RelA / SpoT proteins
C3D92_RS07755	PF01192	RNA polymerase Rpb6 
C3D92_RS07760	PF00625	Guanylate kinase
C3D92_RS07765	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3D92_RS07770	PF00034	Cytochrome c
C3D92_RS07780	PF00877	NlpC/P60 family
C3D92_RS07785	PF01048	Phosphorylase superfamily
C3D92_RS07785	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus 
C3D92_RS07805	PF08340	Domain of unknown function (DUF1732)
C3D92_RS07805	PF03755	YicC-like family, N-terminal region 
C3D92_RS07810	PF01138	3' exoribonuclease family, domain 1
C3D92_RS07810	PF03725	3' exoribonuclease family, domain 2
C3D92_RS07820	PF03466	LysR substrate binding domain
C3D92_RS07820	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS07830	PF17154	Gammaproteobacterial periplasmic sensor domain
C3D92_RS07830	PF00990	Diguanylate cyclase, GGDEF domain
C3D92_RS07830	PF00563	EAL domain
C3D92_RS07830	PF00672	HAMP domain
C3D92_RS07835	PF01725	Ham1 family
C3D92_RS07845	PF06969	HemN C-terminal domain
C3D92_RS07845	PF04055	Radical SAM superfamily
C3D92_RS07850	PF03951	Glutamine synthetase, beta-Grasp domain
C3D92_RS07850	PF00120	Glutamine synthetase, catalytic domain
C3D92_RS07855	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS07855	PF00989	PAS fold
C3D92_RS07855	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS07860	PF00072	Response regulator receiver domain
C3D92_RS07860	PF00158	Sigma-54 interaction domain
C3D92_RS07860	PF02954	Bacterial regulatory protein, Fis family
C3D92_RS07865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS07865	PF03466	LysR substrate binding domain
C3D92_RS07870	PF02678	Pirin
C3D92_RS07870	PF17954	Quercetinase C-terminal cupin domain
C3D92_RS07875	PF02678	Pirin
C3D92_RS07875	PF05726	Pirin C-terminal cupin domain
C3D92_RS07885	PF00005	ABC transporter
C3D92_RS07885	PF08402	TOBE domain
C3D92_RS07890	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS07900	PF00970	Oxidoreductase FAD-binding domain
C3D92_RS07900	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS07905	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS07905	PF03466	LysR substrate binding domain
C3D92_RS07915	PF00248	Aldo/keto reductase family
C3D92_RS07925	PF01042	Endoribonuclease L-PSP
C3D92_RS07930	PF00271	Helicase conserved C-terminal domain
C3D92_RS07930	PF00270	DEAD/DEAH box helicase
C3D92_RS07930	PF17191	RecG wedge domain
C3D92_RS07935	PF03466	LysR substrate binding domain
C3D92_RS07935	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS07940	PF03466	LysR substrate binding domain
C3D92_RS07940	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS07945	PF00171	Aldehyde dehydrogenase family
C3D92_RS07950	PF00210	Ferritin-like domain
C3D92_RS07970	PF00535	Glycosyl transferase family 2
C3D92_RS07980	PF00005	ABC transporter
C3D92_RS07990	PF00534	Glycosyl transferases group 1
C3D92_RS08000	PF02563	Polysaccharide biosynthesis/export protein
C3D92_RS08005	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3D92_RS08005	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3D92_RS08005	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3D92_RS08010	PF01370	NAD dependent epimerase/dehydratase family
C3D92_RS08015	PF05159	Capsule polysaccharide biosynthesis protein
C3D92_RS08020	PF05159	Capsule polysaccharide biosynthesis protein
C3D92_RS08030	PF00106	short chain dehydrogenase
C3D92_RS08055	PF00005	ABC transporter
C3D92_RS08060	PF00005	ABC transporter
C3D92_RS08060	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS08075	PF03741	Integral membrane protein TerC family
C3D92_RS08085	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS08100	PF17863	AAA lid domain
C3D92_RS08100	PF07726	ATPase family associated with various cellular activities (AAA)
C3D92_RS08135	PF00884	Sulfatase
C3D92_RS08160	PF00072	Response regulator receiver domain
C3D92_RS08160	PF00196	Bacterial regulatory proteins, luxR family
C3D92_RS08165	PF03797	Autotransporter beta-domain
C3D92_RS08165	PF12951	Passenger-associated-transport-repeat
C3D92_RS08165	PF00082	Subtilase family
C3D92_RS08170	PF15731	Antitoxin component of bacterial toxin-antitoxin system, MqsA
C3D92_RS08180	PF02798	Glutathione S-transferase, N-terminal domain
C3D92_RS08180	PF00043	Glutathione S-transferase, C-terminal domain
C3D92_RS08185	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
C3D92_RS08190	PF03466	LysR substrate binding domain
C3D92_RS08190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS08195	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS08205	PF01070	FMN-dependent dehydrogenase
C3D92_RS08210	PF01557	Fumarylacetoacetate (FAA) hydrolase family
C3D92_RS08225	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS08230	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS08230	PF03466	LysR substrate binding domain
C3D92_RS08235	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS08260	PF03358	NADPH-dependent FMN reductase
C3D92_RS08285	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS08295	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS08295	PF03466	LysR substrate binding domain
C3D92_RS08315	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
C3D92_RS08315	PF00361	Proton-conducting membrane transporter
C3D92_RS08315	PF13244	Domain of unknown function (DUF4040)
C3D92_RS08315	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
C3D92_RS08320	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
C3D92_RS08325	PF00361	Proton-conducting membrane transporter
C3D92_RS08330	PF01899	Na+/H+ ion antiporter subunit
C3D92_RS08335	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
C3D92_RS08360	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3D92_RS08365	PF17676	LD-carboxypeptidase C-terminal domain
C3D92_RS08365	PF02016	LD-carboxypeptidase N-terminal domain
C3D92_RS08370	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS08375	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS08385	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS08390	PF12848	ABC transporter
C3D92_RS08390	PF00005	ABC transporter
C3D92_RS08395	PF00005	ABC transporter
C3D92_RS08425	PF00970	Oxidoreductase FAD-binding domain
C3D92_RS08425	PF00042	Globin
C3D92_RS08425	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS08430	PF02082	Transcriptional regulator
C3D92_RS08435	PF01266	FAD dependent oxidoreductase
C3D92_RS08450	PF01571	Aminomethyltransferase folate-binding domain
C3D92_RS08455	PF02618	YceG-like family
C3D92_RS08460	PF02223	Thymidylate kinase
C3D92_RS08465	PF12169	DNA polymerase III subunits gamma and tau domain III
C3D92_RS08470	PF01026	TatD related DNase
C3D92_RS08485	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS08495	PF00005	ABC transporter
C3D92_RS08505	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C3D92_RS08505	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
C3D92_RS08515	PF01546	Peptidase family M20/M25/M40
C3D92_RS08515	PF07687	Peptidase dimerisation domain
C3D92_RS08520	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS08520	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS08520	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS08530	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
C3D92_RS08530	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS08540	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS08540	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
C3D92_RS08545	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS08545	PF07729	FCD domain
C3D92_RS08590	PF01425	Amidase
C3D92_RS08595	PF07286	Protein of unknown function (DUF1445)
C3D92_RS08605	PF00072	Response regulator receiver domain
C3D92_RS08605	PF00989	PAS fold
C3D92_RS08605	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS08605	PF01627	Hpt domain
C3D92_RS08605	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS08605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS08610	PF00196	Bacterial regulatory proteins, luxR family
C3D92_RS08610	PF00072	Response regulator receiver domain
C3D92_RS08615	PF05860	haemagglutination activity domain
C3D92_RS08615	PF13018	Extended Signal Peptide of Type V secretion system
C3D92_RS08615	PF05594	Haemagluttinin repeat
C3D92_RS08615	PF13332	Hemagglutinin repeat
C3D92_RS08620	PF16970	Type-1 fimbrial protein, A
C3D92_RS08625	PF02753	Pili assembly chaperone PapD, C-terminal domain
C3D92_RS08625	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
C3D92_RS08630	PF13953	PapC C-terminal domain
C3D92_RS08630	PF00577	Outer membrane usher protein
C3D92_RS08630	PF13954	PapC N-terminal domain
C3D92_RS08635	PF00419	Fimbrial protein
C3D92_RS08640	PF08479	POTRA domain, ShlB-type
C3D92_RS08640	PF17287	POTRA domain
C3D92_RS08640	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
C3D92_RS08655	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS08690	PF01968	Hydantoinase/oxoprolinase
C3D92_RS08690	PF05378	Hydantoinase/oxoprolinase N-terminal region
C3D92_RS08705	PF05552	Conserved TM helix
C3D92_RS08705	PF00924	Mechanosensitive ion channel
C3D92_RS08715	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS08720	PF00588	SpoU rRNA Methylase family
C3D92_RS08725	PF00459	Inositol monophosphatase family
C3D92_RS08730	PF03741	Integral membrane protein TerC family
C3D92_RS08730	PF03471	Transporter associated domain
C3D92_RS08735	PF02673	Bacitracin resistance protein BacA
C3D92_RS08740	PF00149	Calcineurin-like phosphoesterase
C3D92_RS08745	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
C3D92_RS08755	PF09190	DALR domain
C3D92_RS08755	PF01406	tRNA synthetases class I (C) catalytic domain
C3D92_RS08760	PF06029	AlkA N-terminal domain
C3D92_RS08760	PF12833	Helix-turn-helix domain
C3D92_RS08760	PF02805	Metal binding domain of Ada
C3D92_RS08760	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3D92_RS08765	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
C3D92_RS08775	PF09179	TilS substrate binding domain
C3D92_RS08775	PF01171	PP-loop family
C3D92_RS08780	PF13840	ACT domain 
C3D92_RS08780	PF01842	ACT domain
C3D92_RS08780	PF00696	Amino acid kinase family
C3D92_RS08805	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3D92_RS08805	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3D92_RS08810	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
C3D92_RS08810	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS08815	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS08820	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS08825	PF00561	alpha/beta hydrolase fold
C3D92_RS08830	PF03447	Homoserine dehydrogenase, NAD binding domain
C3D92_RS08830	PF01958	Domain of unknown function DUF108
C3D92_RS08845	PF03466	LysR substrate binding domain
C3D92_RS08845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS08860	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS08865	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS08870	PF00005	ABC transporter
C3D92_RS08870	PF08402	TOBE domain
C3D92_RS08880	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
C3D92_RS08880	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS08885	PF09339	IclR helix-turn-helix domain
C3D92_RS08885	PF01614	Bacterial transcriptional regulator
C3D92_RS08890	PF13380	CoA binding domain
C3D92_RS08895	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS08900	PF01042	Endoribonuclease L-PSP
C3D92_RS08925	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
C3D92_RS08935	PF00535	Glycosyl transferase family 2
C3D92_RS08940	PF14883	Hypothetical glycosyl hydrolase family 13
C3D92_RS08940	PF01522	Polysaccharide deacetylase
C3D92_RS08960	PF12802	MarR family
C3D92_RS08965	PF00072	Response regulator receiver domain
C3D92_RS08965	PF00196	Bacterial regulatory proteins, luxR family
C3D92_RS08975	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
C3D92_RS08975	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
C3D92_RS08975	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
C3D92_RS08975	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
C3D92_RS08980	PF00342	Phosphoglucose isomerase
C3D92_RS08985	PF00132	Bacterial transferase hexapeptide (six repeats)
C3D92_RS08995	PF02146	Sir2 family
C3D92_RS09000	PF00459	Inositol monophosphatase family
C3D92_RS09005	PF00171	Aldehyde dehydrogenase family
C3D92_RS09010	PF00202	Aminotransferase class-III
C3D92_RS09025	PF00580	UvrD/REP helicase N-terminal domain
C3D92_RS09025	PF13361	UvrD-like helicase C-terminal domain
C3D92_RS09030	PF01544	CorA-like Mg2+ transporter protein
C3D92_RS09040	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS09045	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS09050	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3D92_RS09050	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS09055	PF00005	ABC transporter
C3D92_RS09055	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS09060	PF01047	MarR family
C3D92_RS09080	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
C3D92_RS09080	PF08479	POTRA domain, ShlB-type
C3D92_RS09085	PF00563	EAL domain
C3D92_RS09085	PF03707	Bacterial signalling protein N terminal repeat
C3D92_RS09085	PF00990	Diguanylate cyclase, GGDEF domain
C3D92_RS09115	PF13629	Pilus formation protein N terminal region
C3D92_RS09115	PF04972	BON domain
C3D92_RS09115	PF00263	Bacterial type II and III secretion system protein
C3D92_RS09155	PF00072	Response regulator receiver domain
C3D92_RS09155	PF02954	Bacterial regulatory protein, Fis family
C3D92_RS09155	PF00158	Sigma-54 interaction domain
C3D92_RS09170	PF08281	Sigma-70, region 4
C3D92_RS09170	PF04542	Sigma-70 region 2 
C3D92_RS09180	PF00034	Cytochrome c
C3D92_RS09185	PF01132	Elongation factor P (EF-P) OB domain
C3D92_RS09185	PF09285	Elongation factor P, C-terminal
C3D92_RS09185	PF08207	Elongation factor P (EF-P) KOW-like domain
C3D92_RS09200	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
C3D92_RS09205	PF00694	Aconitase C-terminal domain
C3D92_RS09205	PF00330	Aconitase family (aconitate hydratase)
C3D92_RS09215	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS09215	PF00593	TonB dependent receptor
C3D92_RS09235	PF00691	OmpA family
C3D92_RS09245	PF00330	Aconitase family (aconitate hydratase)
C3D92_RS09245	PF06434	Aconitate hydratase 2 N-terminus
C3D92_RS09245	PF11791	Aconitate B N-terminal domain
C3D92_RS09270	PF00892	EamA-like transporter family
C3D92_RS09275	PF01925	Sulfite exporter TauE/SafE
C3D92_RS09295	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS09295	PF03466	LysR substrate binding domain
C3D92_RS09300	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
C3D92_RS09300	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
C3D92_RS09310	PF03466	LysR substrate binding domain
C3D92_RS09310	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS09355	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3D92_RS09355	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3D92_RS09360	PF01425	Amidase
C3D92_RS09370	PF00171	Aldehyde dehydrogenase family
C3D92_RS09385	PF08264	Anticodon-binding domain of tRNA
C3D92_RS09385	PF00133	tRNA synthetases class I (I, L, M and V)
C3D92_RS09385	PF13603	Leucyl-tRNA synthetase, Domain 2
C3D92_RS09385	PF09334	tRNA synthetases class I (M)
C3D92_RS09390	PF07690	Major Facilitator Superfamily
C3D92_RS09395	PF01047	MarR family
C3D92_RS09420	PF00916	Sulfate permease family
C3D92_RS09420	PF01740	STAS domain
C3D92_RS09425	PF00471	Ribosomal protein L33
C3D92_RS09430	PF00830	Ribosomal L28 family
C3D92_RS09435	PF07690	Major Facilitator Superfamily
C3D92_RS09455	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS09460	PF00005	ABC transporter
C3D92_RS09460	PF00571	CBS domain
C3D92_RS09465	PF01361	Tautomerase enzyme
C3D92_RS09470	PF00108	Thiolase, N-terminal domain
C3D92_RS09470	PF02803	Thiolase, C-terminal domain
C3D92_RS09480	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS09480	PF07729	FCD domain
C3D92_RS09490	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS09500	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS09505	PF00080	Copper/zinc superoxide dismutase (SODC)
C3D92_RS09520	PF00005	ABC transporter
C3D92_RS09525	PF03459	TOBE domain
C3D92_RS09525	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS09545	PF00529	HlyD membrane-fusion protein of T1SS
C3D92_RS09545	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
C3D92_RS09550	PF00873	AcrB/AcrD/AcrF family
C3D92_RS09560	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
C3D92_RS09565	PF01648	4'-phosphopantetheinyl transferase superfamily
C3D92_RS09570	PF00933	Glycosyl hydrolase family 3 N terminal domain
C3D92_RS09575	PF01541	GIY-YIG catalytic domain
C3D92_RS09575	PF08459	UvrC Helix-hairpin-helix N-terminal
C3D92_RS09575	PF02151	UvrB/uvrC motif
C3D92_RS09580	PF01066	CDP-alcohol phosphatidyltransferase
C3D92_RS09590	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
C3D92_RS09590	PF14489	QueF-like protein
C3D92_RS09595	PF00463	Isocitrate lyase family
C3D92_RS09620	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS09625	PF13458	Periplasmic binding protein
C3D92_RS09630	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
C3D92_RS09630	PF00355	Rieske [2Fe-2S] domain
C3D92_RS09635	PF00866	Ring hydroxylating beta subunit
C3D92_RS09640	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS09650	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS09655	PF02515	CoA-transferase family III
C3D92_RS09660	PF07859	alpha/beta hydrolase fold
C3D92_RS09665	PF00501	AMP-binding enzyme
C3D92_RS09665	PF14535	AMP-binding enzyme C-terminal domain
C3D92_RS09670	PF00108	Thiolase, N-terminal domain
C3D92_RS09670	PF02803	Thiolase, C-terminal domain
C3D92_RS09685	PF03466	LysR substrate binding domain
C3D92_RS09685	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS09690	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS09715	PF01152	Bacterial-like globin
C3D92_RS09760	PF01522	Polysaccharide deacetylase
C3D92_RS09765	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS09790	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3D92_RS09790	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS09815	PF03466	LysR substrate binding domain
C3D92_RS09815	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS09825	PF01799	[2Fe-2S] binding domain
C3D92_RS09825	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS09830	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
C3D92_RS09840	PF06719	AraC-type transcriptional regulator N-terminus
C3D92_RS09840	PF12833	Helix-turn-helix domain
C3D92_RS09860	PF07690	Major Facilitator Superfamily
C3D92_RS09885	PF00664	ABC transporter transmembrane region
C3D92_RS09885	PF00005	ABC transporter
C3D92_RS09895	PF02535	ZIP Zinc transporter
C3D92_RS09910	PF00916	Sulfate permease family
C3D92_RS09910	PF01740	STAS domain
C3D92_RS09930	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
C3D92_RS09930	PF03625	Domain of unknown function DUF302 
C3D92_RS09940	PF02805	Metal binding domain of Ada
C3D92_RS09940	PF12833	Helix-turn-helix domain
C3D92_RS09945	PF07237	Protein of unknown function (DUF1428)
C3D92_RS09950	PF02567	Phenazine biosynthesis-like protein
C3D92_RS09955	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS09955	PF03466	LysR substrate binding domain
C3D92_RS09960	PF04286	Protein of unknown function (DUF445)
C3D92_RS09975	PF00171	Aldehyde dehydrogenase family
C3D92_RS09980	PF01590	GAF domain
C3D92_RS09980	PF02954	Bacterial regulatory protein, Fis family
C3D92_RS09980	PF00158	Sigma-54 interaction domain
C3D92_RS10010	PF03788	LrgA family
C3D92_RS10015	PF13649	Methyltransferase domain
C3D92_RS10025	PF00155	Aminotransferase class I and II
C3D92_RS10030	PF00202	Aminotransferase class-III
C3D92_RS10065	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3D92_RS10065	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
C3D92_RS10070	PF12801	4Fe-4S binding domain
C3D92_RS10070	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
C3D92_RS10070	PF13746	4Fe-4S dicluster domain
C3D92_RS10095	PF00005	ABC transporter
C3D92_RS10100	PF01061	ABC-2 type transporter
C3D92_RS10105	PF01594	AI-2E family transporter
C3D92_RS10135	PF04546	Sigma-70, non-essential region
C3D92_RS10135	PF03979	Sigma-70 factor, region 1.1
C3D92_RS10135	PF00140	Sigma-70 factor, region 1.2
C3D92_RS10135	PF04542	Sigma-70 region 2 
C3D92_RS10135	PF04539	Sigma-70 region 3
C3D92_RS10135	PF04545	Sigma-70, region 4
C3D92_RS10140	PF10410	DnaB-helicase binding domain of primase
C3D92_RS10140	PF08278	DNA primase DnaG DnaB-binding 
C3D92_RS10140	PF08275	DNA primase catalytic core, N-terminal domain
C3D92_RS10140	PF01807	CHC2 zinc finger
C3D92_RS10145	PF01165	Ribosomal protein S21
C3D92_RS10150	PF00156	Phosphoribosyl transferase domain
C3D92_RS10155	PF00709	Adenylosuccinate synthetase
C3D92_RS10160	PF13393	Histidyl-tRNA synthetase
C3D92_RS10165	PF01145	SPFH domain / Band 7 family
C3D92_RS10170	PF12221	Bacterial membrane protein N terminal
C3D92_RS10170	PF01145	SPFH domain / Band 7 family
C3D92_RS10175	PF01926	50S ribosome-binding GTPase
C3D92_RS10175	PF13167	GTP-binding GTPase N-terminal
C3D92_RS10175	PF16360	GTP-binding GTPase Middle Region
C3D92_RS10180	PF17209	Hfq protein
C3D92_RS10185	PF00155	Aminotransferase class I and II
C3D92_RS10190	PF01926	50S ribosome-binding GTPase
C3D92_RS10190	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
C3D92_RS10195	PF13360	PQQ-like domain
C3D92_RS10200	PF09976	Tetratricopeptide repeat-like domain
C3D92_RS10205	PF03129	Anticodon binding domain
C3D92_RS10205	PF13393	Histidyl-tRNA synthetase
C3D92_RS10210	PF04551	GcpE protein
C3D92_RS10220	PF04055	Radical SAM superfamily
C3D92_RS10225	PF00334	Nucleoside diphosphate kinase
C3D92_RS10230	PF10458	Valyl tRNA synthetase tRNA binding arm
C3D92_RS10230	PF00133	tRNA synthetases class I (I, L, M and V)
C3D92_RS10230	PF08264	Anticodon-binding domain of tRNA
C3D92_RS10245	PF08521	Two-component sensor kinase N-terminal
C3D92_RS10245	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS10245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS10270	PF00266	Aminotransferase class-V
C3D92_RS10275	PF01746	tRNA (Guanine-1)-methyltransferase
C3D92_RS10280	PF01782	RimM N-terminal domain
C3D92_RS10285	PF00886	Ribosomal protein S16
C3D92_RS10295	PF01206	Sulfurtransferase TusA
C3D92_RS10300	PF01411	tRNA synthetases class II (A)
C3D92_RS10300	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3D92_RS10300	PF02272	DHHA1 domain
C3D92_RS10345	PF01425	Amidase
C3D92_RS10350	PF00005	ABC transporter
C3D92_RS10350	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS10355	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS10360	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS10365	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS10385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS10385	PF03466	LysR substrate binding domain
C3D92_RS10390	PF13416	Bacterial extracellular solute-binding protein
C3D92_RS10395	PF01266	FAD dependent oxidoreductase
C3D92_RS10400	PF00970	Oxidoreductase FAD-binding domain
C3D92_RS10400	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS10400	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS10405	PF02261	Aspartate decarboxylase
C3D92_RS10425	PF17042	Nucleotide-binding C-terminal domain
C3D92_RS10425	PF07005	Sugar-binding N-terminal domain
C3D92_RS10440	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS10450	PF02142	MGS-like domain
C3D92_RS10455	PF04384	Iron-sulphur cluster assembly
C3D92_RS10460	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS10465	PF00012	Hsp70 protein
C3D92_RS10470	PF07743	HSCB C-terminal oligomerisation domain
C3D92_RS10475	PF01521	Iron-sulphur cluster biosynthesis
C3D92_RS10480	PF01592	NifU-like N terminal domain
C3D92_RS10485	PF00266	Aminotransferase class-V
C3D92_RS10490	PF02082	Transcriptional regulator
C3D92_RS10495	PF01451	Low molecular weight phosphotyrosine protein phosphatase
C3D92_RS10500	PF12344	Ultra-violet resistance protein B
C3D92_RS10500	PF00271	Helicase conserved C-terminal domain
C3D92_RS10500	PF04851	Type III restriction enzyme, res subunit
C3D92_RS10500	PF02151	UvrB/uvrC motif
C3D92_RS10500	PF17757	UvrB interaction domain
C3D92_RS10505	PF00155	Aminotransferase class I and II
C3D92_RS10510	PF01726	LexA DNA binding domain
C3D92_RS10510	PF00717	Peptidase S24-like
C3D92_RS10535	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS10540	PF01144	Coenzyme A transferase
C3D92_RS10545	PF01144	Coenzyme A transferase
C3D92_RS10565	PF00108	Thiolase, N-terminal domain
C3D92_RS10565	PF02803	Thiolase, C-terminal domain
C3D92_RS10575	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS10580	PF01575	MaoC like domain
C3D92_RS10585	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS10590	PF02515	CoA-transferase family III
C3D92_RS10595	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS10595	PF03466	LysR substrate binding domain
C3D92_RS10600	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
C3D92_RS10600	PF05362	Lon protease (S16) C-terminal proteolytic domain
C3D92_RS10600	PF00004	ATPase family associated with various cellular activities (AAA)
C3D92_RS10605	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3D92_RS10605	PF07724	AAA domain (Cdc48 subfamily)
C3D92_RS10605	PF06689	ClpX C4-type zinc finger
C3D92_RS10610	PF00574	Clp protease
C3D92_RS10615	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
C3D92_RS10615	PF05697	Bacterial trigger factor protein (TF)
C3D92_RS10615	PF05698	Bacterial trigger factor protein (TF) C-terminus
C3D92_RS10620	PF03350	Uncharacterized protein family, UPF0114
C3D92_RS10625	PF00313	'Cold-shock' DNA-binding domain
C3D92_RS10635	PF00313	'Cold-shock' DNA-binding domain
C3D92_RS10670	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
C3D92_RS10670	PF14602	Hexapeptide repeat of succinyl-transferase
C3D92_RS10670	PF00132	Bacterial transferase hexapeptide (six repeats)
C3D92_RS10675	PF07687	Peptidase dimerisation domain
C3D92_RS10675	PF01546	Peptidase family M20/M25/M40
C3D92_RS10680	PF05175	Methyltransferase small domain
C3D92_RS10685	PF12848	ABC transporter
C3D92_RS10685	PF00005	ABC transporter
C3D92_RS10690	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS10695	PF13361	UvrD-like helicase C-terminal domain
C3D92_RS10695	PF00580	UvrD/REP helicase N-terminal domain
C3D92_RS10715	PF00551	Formyl transferase
C3D92_RS10720	PF01687	Riboflavin kinase
C3D92_RS10720	PF06574	FAD synthetase
C3D92_RS10725	PF08264	Anticodon-binding domain of tRNA
C3D92_RS10725	PF06827	Zinc finger found in FPG and IleRS
C3D92_RS10725	PF00133	tRNA synthetases class I (I, L, M and V)
C3D92_RS10730	PF01252	Signal peptidase (SPase) II
C3D92_RS10735	PF02441	Flavoprotein
C3D92_RS10735	PF04127	DNA / pantothenate metabolism flavoprotein
C3D92_RS10745	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS10765	PF13406	Transglycosylase SLT domain
C3D92_RS10770	PF04305	Protein of unknown function (DUF455)
C3D92_RS10790	PF02875	Mur ligase family, glutamate ligase domain
C3D92_RS10790	PF08245	Mur ligase middle domain
C3D92_RS10790	PF08443	RimK-like ATP-grasp domain
C3D92_RS10795	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3D92_RS10795	PF02875	Mur ligase family, glutamate ligase domain
C3D92_RS10795	PF08245	Mur ligase middle domain
C3D92_RS10800	PF05532	CsbD-like
C3D92_RS10810	PF04972	BON domain
C3D92_RS10835	PF00005	ABC transporter
C3D92_RS10840	PF13472	GDSL-like Lipase/Acylhydrolase family
C3D92_RS10845	PF13145	PPIC-type PPIASE domain
C3D92_RS10850	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3D92_RS10855	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
C3D92_RS10860	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3D92_RS10860	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS10865	PF00462	Glutaredoxin
C3D92_RS10865	PF08534	Redoxin
C3D92_RS10875	PF09278	MerR, DNA binding
C3D92_RS10875	PF00376	MerR family regulatory protein
C3D92_RS10880	PF05958	tRNA (Uracil-5-)-methyltransferase
C3D92_RS10900	PF01551	Peptidase family M23
C3D92_RS10900	PF01476	LysM domain
C3D92_RS10910	PF01975	Survival protein SurE
C3D92_RS10915	PF02660	Glycerol-3-phosphate acyltransferase
C3D92_RS10925	PF00814	Glycoprotease family
C3D92_RS10930	PF00860	Permease family
C3D92_RS10940	PF00085	Thioredoxin
C3D92_RS10945	PF01205	Uncharacterized protein family UPF0029
C3D92_RS10955	PF00583	Acetyltransferase (GNAT) family
C3D92_RS10960	PF12802	MarR family
C3D92_RS10970	PF00202	Aminotransferase class-III
C3D92_RS10975	PF16868	NMT1-like family
C3D92_RS10995	PF03797	Autotransporter beta-domain
C3D92_RS11010	PF13396	Phospholipase_D-nuclease N-terminal
C3D92_RS11010	PF13091	PLD-like domain
C3D92_RS11015	PF01740	STAS domain
C3D92_RS11020	PF13581	Histidine kinase-like ATPase domain
C3D92_RS11025	PF01168	Alanine racemase, N-terminal domain
C3D92_RS11025	PF00842	Alanine racemase, C-terminal domain
C3D92_RS11035	PF00672	HAMP domain
C3D92_RS11035	PF07228	Stage II sporulation protein E (SpoIIE)
C3D92_RS11060	PF08281	Sigma-70, region 4
C3D92_RS11060	PF04542	Sigma-70 region 2 
C3D92_RS11065	PF00263	Bacterial type II and III secretion system protein
C3D92_RS11065	PF03958	Bacterial type II/III secretion system short domain
C3D92_RS11075	PF01312	FlhB HrpN YscU SpaS Family
C3D92_RS11080	PF01311	Bacterial export proteins, family 1
C3D92_RS11085	PF01313	Bacterial export proteins, family 3
C3D92_RS11090	PF00813	FliP family
C3D92_RS11095	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3D92_RS11110	PF18269	T3SS EscN ATPase C-terminal domain
C3D92_RS11110	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3D92_RS11110	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3D92_RS11115	PF02108	Flagellar assembly protein FliH
C3D92_RS11125	PF01514	Secretory protein of YscJ/FliF family
C3D92_RS11190	PF00771	FHIPEP family
C3D92_RS11230	PF01272	Transcription elongation factor, GreA/GreB, C-term
C3D92_RS11230	PF03449	Transcription elongation factor, N-terminal
C3D92_RS11235	PF02203	Tar ligand binding domain homologue
C3D92_RS11235	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3D92_RS11235	PF00672	HAMP domain
C3D92_RS11240	PF00860	Permease family
C3D92_RS11270	PF13419	Haloacid dehalogenase-like hydrolase
C3D92_RS11275	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS11280	PF08402	TOBE domain
C3D92_RS11280	PF00005	ABC transporter
C3D92_RS11285	PF03466	LysR substrate binding domain
C3D92_RS11285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS11295	PF00581	Rhodanese-like domain
C3D92_RS11305	PF01435	Peptidase family M48
C3D92_RS11310	PF08240	Alcohol dehydrogenase GroES-like domain
C3D92_RS11310	PF00107	Zinc-binding dehydrogenase
C3D92_RS11315	PF00892	EamA-like transporter family
C3D92_RS11325	PF01047	MarR family
C3D92_RS11335	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
C3D92_RS11335	PF00529	HlyD membrane-fusion protein of T1SS
C3D92_RS11340	PF07690	Major Facilitator Superfamily
C3D92_RS11345	PF00180	Isocitrate/isopropylmalate dehydrogenase
C3D92_RS11350	PF00155	Aminotransferase class I and II
C3D92_RS11350	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS11355	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS11360	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS11365	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3D92_RS11365	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS11370	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS11370	PF00005	ABC transporter
C3D92_RS11380	PF00202	Aminotransferase class-III
C3D92_RS11385	PF07883	Cupin domain
C3D92_RS11390	PF00850	Histone deacetylase domain
C3D92_RS11395	PF01546	Peptidase family M20/M25/M40
C3D92_RS11395	PF07687	Peptidase dimerisation domain
C3D92_RS11405	PF00171	Aldehyde dehydrogenase family
C3D92_RS11410	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3D92_RS11415	PF00202	Aminotransferase class-III
C3D92_RS11420	PF01235	Sodium:alanine symporter family
C3D92_RS11425	PF05872	Bacterial protein of unknown function (DUF853)
C3D92_RS11430	PF01709	Transcriptional regulator
C3D92_RS11435	PF02843	Phosphoribosylglycinamide synthetase, C domain
C3D92_RS11435	PF02844	Phosphoribosylglycinamide synthetase, N domain
C3D92_RS11435	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
C3D92_RS11440	PF01218	Coproporphyrinogen III oxidase
C3D92_RS11445	PF01467	Cytidylyltransferase-like
C3D92_RS11455	PF02590	Predicted SPOUT methyltransferase
C3D92_RS11460	PF02545	Maf-like protein
C3D92_RS11465	PF03212	Pertactin
C3D92_RS11465	PF03797	Autotransporter beta-domain
C3D92_RS11505	PF10150	Ribonuclease E/G family
C3D92_RS11505	PF00575	S1 RNA binding domain
C3D92_RS11510	PF01842	ACT domain
C3D92_RS11510	PF00800	Prephenate dehydratase
C3D92_RS11520	PF07690	Major Facilitator Superfamily
C3D92_RS11525	PF00005	ABC transporter
C3D92_RS11525	PF00664	ABC transporter transmembrane region
C3D92_RS11530	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
C3D92_RS11540	PF03692	Putative zinc- or iron-chelating domain
C3D92_RS11555	PF00884	Sulfatase
C3D92_RS11560	PF00534	Glycosyl transferases group 1
C3D92_RS11560	PF13439	Glycosyltransferase Family 4
C3D92_RS11565	PF00535	Glycosyl transferase family 2
C3D92_RS11570	PF01522	Polysaccharide deacetylase
C3D92_RS11575	PF00534	Glycosyl transferases group 1
C3D92_RS11575	PF13439	Glycosyltransferase Family 4
C3D92_RS11580	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
C3D92_RS11580	PF01336	OB-fold nucleic acid binding domain
C3D92_RS11580	PF02811	PHP domain
C3D92_RS11580	PF07733	Bacterial DNA polymerase III alpha NTPase domain
C3D92_RS11580	PF14579	Helix-hairpin-helix motif
C3D92_RS11590	PF00270	DEAD/DEAH box helicase
C3D92_RS11590	PF11898	Domain of unknown function (DUF3418)
C3D92_RS11590	PF04408	Helicase associated domain (HA2)
C3D92_RS11590	PF00271	Helicase conserved C-terminal domain
C3D92_RS11590	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
C3D92_RS11595	PF00696	Amino acid kinase family
C3D92_RS11595	PF00583	Acetyltransferase (GNAT) family
C3D92_RS11600	PF04362	Bacterial Fe(2+) trafficking
C3D92_RS11605	PF04185	Phosphoesterase family
C3D92_RS11605	PF05506	Domain of unknown function (DUF756)
C3D92_RS11610	PF01895	PhoU domain
C3D92_RS11615	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
C3D92_RS11620	PF18158	Adaptive response protein AidB N-terminal domain
C3D92_RS11620	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS11620	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS11625	PF02646	RmuC family
C3D92_RS11635	PF02245	Methylpurine-DNA glycosylase (MPG)
C3D92_RS11645	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS11650	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS11655	PF00005	ABC transporter
C3D92_RS11655	PF08402	TOBE domain
C3D92_RS11660	PF13416	Bacterial extracellular solute-binding protein
C3D92_RS11680	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS11690	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS11690	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
C3D92_RS11705	PF00285	Citrate synthase, C-terminal domain
C3D92_RS11710	PF03937	Flavinator of succinate dehydrogenase
C3D92_RS11715	PF13085	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS11720	PF00890	FAD binding domain
C3D92_RS11720	PF02910	Fumarate reductase flavoprotein C-term
C3D92_RS11725	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
C3D92_RS11730	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
C3D92_RS11735	PF07702	UTRA domain
C3D92_RS11735	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS11740	PF00056	lactate/malate dehydrogenase, NAD binding domain
C3D92_RS11740	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
C3D92_RS11750	PF00285	Citrate synthase, C-terminal domain
C3D92_RS11770	PF04303	PrpF protein
C3D92_RS11775	PF03972	MmgE/PrpD family
C3D92_RS11780	PF03653	Uncharacterised protein family (UPF0093)
C3D92_RS11785	PF01170	Putative RNA methylase family UPF0020
C3D92_RS11785	PF02926	THUMP domain
C3D92_RS11805	PF16177	Acetyl-coenzyme A synthetase N-terminus
C3D92_RS11805	PF00501	AMP-binding enzyme
C3D92_RS11805	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS11815	PF01430	Hsp33 protein
C3D92_RS11840	PF00211	Adenylate and Guanylate cyclase catalytic domain
C3D92_RS11845	PF04977	Septum formation initiator
C3D92_RS11850	PF00113	Enolase, C-terminal TIM barrel domain
C3D92_RS11850	PF03952	Enolase, N-terminal domain
C3D92_RS11860	PF00793	DAHP synthetase I family
C3D92_RS11865	PF00117	Glutamine amidotransferase class-I
C3D92_RS11865	PF06418	CTP synthase N-terminus
C3D92_RS11875	PF01321	Creatinase/Prolidase N-terminal domain
C3D92_RS11875	PF00557	Metallopeptidase family M24
C3D92_RS11885	PF03576	Peptidase family S58 
C3D92_RS11890	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3D92_RS11890	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS11895	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS11900	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS11905	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS11905	PF00005	ABC transporter
C3D92_RS11910	PF01112	Asparaginase
C3D92_RS11920	PF01144	Coenzyme A transferase
C3D92_RS11940	PF16363	GDP-mannose 4,6 dehydratase
C3D92_RS11955	PF01212	Beta-eliminating lyase
C3D92_RS11960	PF00892	EamA-like transporter family
C3D92_RS11965	PF16177	Acetyl-coenzyme A synthetase N-terminus
C3D92_RS11965	PF00501	AMP-binding enzyme
C3D92_RS11965	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS11975	PF03928	Haem-degrading
C3D92_RS11985	PF00877	NlpC/P60 family
C3D92_RS12000	PF03466	LysR substrate binding domain
C3D92_RS12000	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS12005	PF00171	Aldehyde dehydrogenase family
C3D92_RS12015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS12015	PF03466	LysR substrate binding domain
C3D92_RS12025	PF00883	Cytosol aminopeptidase family, catalytic domain
C3D92_RS12025	PF02789	Cytosol aminopeptidase family, N-terminal domain
C3D92_RS12030	PF04364	DNA polymerase III chi subunit, HolC
C3D92_RS12040	PF01027	Inhibitor of apoptosis-promoting Bax1
C3D92_RS12045	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS12060	PF00291	Pyridoxal-phosphate dependent enzyme
C3D92_RS12070	PF11967	Recombination protein O N terminal
C3D92_RS12070	PF02565	Recombination protein O C terminal
C3D92_RS12075	PF01926	50S ribosome-binding GTPase
C3D92_RS12075	PF07650	KH domain
C3D92_RS12080	PF00035	Double-stranded RNA binding motif
C3D92_RS12080	PF14622	Ribonuclease-III-like
C3D92_RS12085	PF10502	Signal peptidase, peptidase S26 
C3D92_RS12090	PF00679	Elongation factor G C-terminus
C3D92_RS12090	PF06421	GTP-binding protein LepA C-terminus
C3D92_RS12090	PF03144	Elongation factor Tu domain 2
C3D92_RS12090	PF00009	Elongation factor Tu GTP binding domain
C3D92_RS12095	PF13180	PDZ domain
C3D92_RS12110	PF08281	Sigma-70, region 4
C3D92_RS12110	PF04542	Sigma-70 region 2 
C3D92_RS12120	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3D92_RS12120	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3D92_RS12125	PF00550	Phosphopantetheine attachment site
C3D92_RS12135	PF00698	Acyl transferase domain
C3D92_RS12140	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
C3D92_RS12140	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C3D92_RS12145	PF02504	Fatty acid synthesis protein
C3D92_RS12150	PF01783	Ribosomal L32p protein family
C3D92_RS12155	PF02620	Large ribosomal RNA subunit accumulation protein YceD
C3D92_RS12160	PF02545	Maf-like protein
C3D92_RS12170	PF01510	N-acetylmuramoyl-L-alanine amidase
C3D92_RS12185	PF03883	Peroxide stress protein YaaA
C3D92_RS12200	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
C3D92_RS12205	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS12215	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS12220	PF01416	tRNA pseudouridine synthase
C3D92_RS12230	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3D92_RS12230	PF02774	Semialdehyde dehydrogenase, dimerisation domain
C3D92_RS12235	PF00180	Isocitrate/isopropylmalate dehydrogenase
C3D92_RS12240	PF00694	Aconitase C-terminal domain
C3D92_RS12245	PF00330	Aconitase family (aconitate hydratase)
C3D92_RS12250	PF12849	PBP superfamily domain
C3D92_RS12255	PF00005	ABC transporter
C3D92_RS12290	PF01568	Molydopterin dinucleotide binding domain
C3D92_RS12290	PF00384	Molybdopterin oxidoreductase
C3D92_RS12290	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
C3D92_RS12320	PF10609	NUBPL iron-transfer P-loop NTPase
C3D92_RS12325	PF12804	MobA-like NTP transferase domain
C3D92_RS12330	PF00994	Probable molybdopterin binding domain
C3D92_RS12330	PF03454	MoeA C-terminal region (domain IV)
C3D92_RS12330	PF03453	MoeA N-terminal region (domain I and II)
C3D92_RS12335	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
C3D92_RS12340	PF01435	Peptidase family M48
C3D92_RS12345	PF01264	Chorismate synthase
C3D92_RS12350	PF08448	PAS fold
C3D92_RS12350	PF08447	PAS fold
C3D92_RS12350	PF00563	EAL domain
C3D92_RS12350	PF00990	Diguanylate cyclase, GGDEF domain
C3D92_RS12365	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS12370	PF00005	ABC transporter
C3D92_RS12370	PF08402	TOBE domain
C3D92_RS12375	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS12375	PF03466	LysR substrate binding domain
C3D92_RS12380	PF00300	Histidine phosphatase superfamily (branch 1)
C3D92_RS12390	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3D92_RS12390	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C3D92_RS12390	PF02142	MGS-like domain
C3D92_RS12395	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
C3D92_RS12395	PF00117	Glutamine amidotransferase class-I
C3D92_RS12400	PF00923	Transaldolase/Fructose-6-phosphate aldolase
C3D92_RS12435	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
C3D92_RS12435	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3D92_RS12440	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS12445	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS12445	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS12445	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS12450	PF03658	RnfH family Ubiquitin
C3D92_RS12455	PF03364	Polyketide cyclase / dehydrase and lipid transport
C3D92_RS12465	PF01668	SmpB protein
C3D92_RS12470	PF08448	PAS fold
C3D92_RS12470	PF00990	Diguanylate cyclase, GGDEF domain
C3D92_RS12475	PF01145	SPFH domain / Band 7 family
C3D92_RS12475	PF16200	C-terminal region of band_7
C3D92_RS12490	PF00958	GMP synthase C terminal domain
C3D92_RS12490	PF00117	Glutamine amidotransferase class-I
C3D92_RS12495	PF00391	PEP-utilising enzyme, mobile domain
C3D92_RS12495	PF02896	PEP-utilising enzyme, TIM barrel domain
C3D92_RS12495	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
C3D92_RS12500	PF03618	Kinase/pyrophosphorylase
C3D92_RS12505	PF00588	SpoU rRNA Methylase family
C3D92_RS12505	PF08032	RNA 2'-O ribose methyltransferase substrate binding
C3D92_RS12510	PF01351	Ribonuclease HII
C3D92_RS12515	PF02684	Lipid-A-disaccharide synthetase
C3D92_RS12520	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
C3D92_RS12520	PF00132	Bacterial transferase hexapeptide (six repeats)
C3D92_RS12525	PF07977	FabA-like domain
C3D92_RS12530	PF00132	Bacterial transferase hexapeptide (six repeats)
C3D92_RS12530	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
C3D92_RS12535	PF03938	Outer membrane protein (OmpH-like)
C3D92_RS12540	PF07244	Surface antigen variable number repeat
C3D92_RS12540	PF01103	Surface antigen
C3D92_RS12545	PF17820	PDZ domain
C3D92_RS12545	PF02163	Peptidase family M50
C3D92_RS12550	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
C3D92_RS12550	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
C3D92_RS12550	PF13288	DXP reductoisomerase C-terminal domain
C3D92_RS12560	PF01255	Putative undecaprenyl diphosphate synthase
C3D92_RS12565	PF01765	Ribosome recycling factor
C3D92_RS12570	PF00696	Amino acid kinase family
C3D92_RS12575	PF00889	Elongation factor TS
C3D92_RS12580	PF00318	Ribosomal protein S2
C3D92_RS12585	PF00557	Metallopeptidase family M24
C3D92_RS12590	PF01966	HD domain
C3D92_RS12590	PF08335	GlnD PII-uridylyltransferase
C3D92_RS12590	PF01909	Nucleotidyltransferase domain
C3D92_RS12605	PF00156	Phosphoribosyl transferase domain
C3D92_RS12620	PF02875	Mur ligase family, glutamate ligase domain
C3D92_RS12620	PF08245	Mur ligase middle domain
C3D92_RS12630	PF02465	Flagellar hook-associated protein 2 N-terminus
C3D92_RS12630	PF07195	Flagellar hook-associated protein 2 C-terminus
C3D92_RS12630	PF07196	Flagellin hook IN motif
C3D92_RS12635	PF02561	Flagellar protein FliS
C3D92_RS12655	PF01312	FlhB HrpN YscU SpaS Family
C3D92_RS12665	PF02049	Flagellar hook-basal body complex protein FliE
C3D92_RS12670	PF08345	Flagellar M-ring protein C-terminal
C3D92_RS12670	PF01514	Secretory protein of YscJ/FliF family
C3D92_RS12675	PF14842	FliG N-terminal domain
C3D92_RS12675	PF14841	FliG middle domain
C3D92_RS12675	PF01706	FliG C-terminal domain
C3D92_RS12685	PF18269	T3SS EscN ATPase C-terminal domain
C3D92_RS12685	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3D92_RS12710	PF03748	Flagellar basal body-associated protein FliL
C3D92_RS12715	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3D92_RS12715	PF02154	Flagellar motor switch protein FliM
C3D92_RS12720	PF16973	Flagellar motor switch protein FliN N-terminal
C3D92_RS12720	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3D92_RS12725	PF04347	Flagellar biosynthesis protein, FliO
C3D92_RS12730	PF00813	FliP family
C3D92_RS12735	PF01313	Bacterial export proteins, family 3
C3D92_RS12740	PF01311	Bacterial export proteins, family 1
C3D92_RS12750	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3D92_RS12750	PF08447	PAS fold
C3D92_RS12755	PF02203	Tar ligand binding domain homologue
C3D92_RS12755	PF00672	HAMP domain
C3D92_RS12755	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3D92_RS12760	PF02203	Tar ligand binding domain homologue
C3D92_RS12760	PF00672	HAMP domain
C3D92_RS12760	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3D92_RS12765	PF00669	Bacterial flagellin N-terminal helical region
C3D92_RS12770	PF00460	Flagella basal body rod protein
C3D92_RS12770	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3D92_RS12775	PF10135	Rod binding protein
C3D92_RS12775	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
C3D92_RS12780	PF02119	Flagellar P-ring protein
C3D92_RS12785	PF02107	Flagellar L-ring protein
C3D92_RS12790	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3D92_RS12790	PF00460	Flagella basal body rod protein
C3D92_RS12795	PF00460	Flagella basal body rod protein
C3D92_RS12795	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3D92_RS12800	PF07559	Flagellar basal body protein FlaE
C3D92_RS12800	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3D92_RS12800	PF00460	Flagella basal body rod protein
C3D92_RS12805	PF13861	FlgD Tudor-like domain
C3D92_RS12805	PF13860	FlgD Ig-like domain
C3D92_RS12805	PF03963	Flagellar hook capping protein - N-terminal region
C3D92_RS12810	PF00460	Flagella basal body rod protein
C3D92_RS12810	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3D92_RS12815	PF00460	Flagella basal body rod protein
C3D92_RS12825	PF04316	Anti-sigma-28 factor, FlgM
C3D92_RS12845	PF01312	FlhB HrpN YscU SpaS Family
C3D92_RS12855	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS12860	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS12865	PF00005	ABC transporter
C3D92_RS12875	PF02558	Ketopantoate reductase PanE/ApbA
C3D92_RS12875	PF08546	Ketopantoate reductase PanE/ApbA C terminal
C3D92_RS12880	PF13378	Enolase C-terminal domain-like
C3D92_RS12885	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS12895	PF00694	Aconitase C-terminal domain
C3D92_RS12900	PF00356	Bacterial regulatory proteins, lacI family
C3D92_RS12905	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS12910	PF02515	CoA-transferase family III
C3D92_RS12920	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS12925	PF13380	CoA binding domain
C3D92_RS12925	PF13607	Succinyl-CoA ligase like flavodoxin domain
C3D92_RS12930	PF07729	FCD domain
C3D92_RS12930	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS12935	PF03328	HpcH/HpaI aldolase/citrate lyase family
C3D92_RS12945	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS12945	PF03466	LysR substrate binding domain
C3D92_RS12955	PF12951	Passenger-associated-transport-repeat
C3D92_RS12965	PF03551	Transcriptional regulator PadR-like family
C3D92_RS12975	PF03372	Endonuclease/Exonuclease/phosphatase family
C3D92_RS12980	PF13091	PLD-like domain
C3D92_RS13025	PF16657	Maltogenic Amylase, C-terminal domain
C3D92_RS13025	PF00128	Alpha amylase, catalytic domain
C3D92_RS13030	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3D92_RS13030	PF00128	Alpha amylase, catalytic domain
C3D92_RS13030	PF02806	Alpha amylase, C-terminal all-beta domain
C3D92_RS13035	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3D92_RS13035	PF00128	Alpha amylase, catalytic domain
C3D92_RS13040	PF00128	Alpha amylase, catalytic domain
C3D92_RS13040	PF11941	Domain of unknown function (DUF3459)
C3D92_RS13040	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3D92_RS13050	PF00128	Alpha amylase, catalytic domain
C3D92_RS13060	PF08543	Phosphomethylpyrimidine kinase
C3D92_RS13065	PF01168	Alanine racemase, N-terminal domain
C3D92_RS13070	PF00155	Aminotransferase class I and II
C3D92_RS13070	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS13085	PF00582	Universal stress protein family
C3D92_RS13090	PF00248	Aldo/keto reductase family
C3D92_RS13105	PF07681	DoxX
C3D92_RS13125	PF00578	AhpC/TSA family
C3D92_RS13130	PF03960	ArsC family
C3D92_RS13135	PF02515	CoA-transferase family III
C3D92_RS13155	PF00255	Glutathione peroxidase
C3D92_RS13160	PF02798	Glutathione S-transferase, N-terminal domain
C3D92_RS13160	PF00043	Glutathione S-transferase, C-terminal domain
C3D92_RS13175	PF03099	Biotin/lipoate A/B protein ligase family
C3D92_RS13175	PF10437	Bacterial lipoate protein ligase C-terminus
C3D92_RS13190	PF02666	Phosphatidylserine decarboxylase
C3D92_RS13195	PF01070	FMN-dependent dehydrogenase
C3D92_RS13200	PF03180	NLPA lipoprotein
C3D92_RS13205	PF08808	RES domain
C3D92_RS13215	PF04241	Protein of unknown function (DUF423)
C3D92_RS13235	PF13458	Periplasmic binding protein
C3D92_RS13240	PF00005	ABC transporter
C3D92_RS13240	PF17912	MalK OB fold domain
C3D92_RS13245	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS13250	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS13255	PF13416	Bacterial extracellular solute-binding protein
C3D92_RS13260	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3D92_RS13260	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3D92_RS13265	PF02592	Putative vitamin uptake transporter
C3D92_RS13280	PF13458	Periplasmic binding protein
C3D92_RS13285	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS13290	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS13290	PF11862	Domain of unknown function (DUF3382)
C3D92_RS13295	PF00005	ABC transporter
C3D92_RS13295	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS13300	PF00005	ABC transporter
C3D92_RS13305	PF01177	Asp/Glu/Hydantoin racemase
C3D92_RS13330	PF04235	Protein of unknown function (DUF418)
C3D92_RS13335	PF00521	DNA gyrase/topoisomerase IV, subunit A
C3D92_RS13345	PF01751	Toprim domain
C3D92_RS13345	PF00986	DNA gyrase B subunit, carboxyl terminus
C3D92_RS13345	PF00204	DNA gyrase B
C3D92_RS13345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS13350	PF00085	Thioredoxin
C3D92_RS13355	PF07497	Rho termination factor, RNA-binding domain
C3D92_RS13355	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3D92_RS13355	PF07498	Rho termination factor, N-terminal domain
C3D92_RS13365	PF08335	GlnD PII-uridylyltransferase
C3D92_RS13365	PF03710	Glutamate-ammonia ligase adenylyltransferase
C3D92_RS13370	PF02677	Epoxyqueuosine reductase QueH
C3D92_RS13375	PF03313	Serine dehydratase alpha chain
C3D92_RS13375	PF03315	Serine dehydratase beta chain
C3D92_RS13380	PF02690	Na+/Pi-cotransporter
C3D92_RS13385	PF01738	Dienelactone hydrolase family
C3D92_RS13395	PF01367	5'-3' exonuclease, C-terminal SAM fold
C3D92_RS13395	PF00476	DNA polymerase family A
C3D92_RS13395	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
C3D92_RS13395	PF01612	3'-5' exonuclease
C3D92_RS13400	PF03641	Possible lysine decarboxylase
C3D92_RS13415	PF03144	Elongation factor Tu domain 2
C3D92_RS13415	PF00009	Elongation factor Tu GTP binding domain
C3D92_RS13415	PF00679	Elongation factor G C-terminus
C3D92_RS13420	PF01509	TruB family pseudouridylate synthase (N terminal domain)
C3D92_RS13420	PF16198	tRNA pseudouridylate synthase B C-terminal domain
C3D92_RS13425	PF02033	Ribosome-binding factor A
C3D92_RS13430	PF00009	Elongation factor Tu GTP binding domain
C3D92_RS13430	PF11987	Translation-initiation factor 2
C3D92_RS13430	PF08364	Bacterial translation initiation factor IF-2 associated region
C3D92_RS13430	PF04760	Translation initiation factor IF-2, N-terminal region
C3D92_RS13435	PF08529	NusA N-terminal domain
C3D92_RS13435	PF13184	NusA-like KH domain
C3D92_RS13440	PF02576	RimP N-terminal domain
C3D92_RS13440	PF17384	RimP C-terminal SH3 domain
C3D92_RS13445	PF01479	S4 domain
C3D92_RS13445	PF00849	RNA pseudouridylate synthase
C3D92_RS13450	PF04079	Segregation and condensation complex subunit ScpB
C3D92_RS13460	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS13460	PF03466	LysR substrate binding domain
C3D92_RS13465	PF00881	Nitroreductase family
C3D92_RS13470	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3D92_RS13470	PF07683	Cobalamin synthesis protein cobW C-terminal domain
C3D92_RS13490	PF14497	Glutathione S-transferase, C-terminal domain
C3D92_RS13490	PF02798	Glutathione S-transferase, N-terminal domain
C3D92_RS13495	PF02401	LytB protein
C3D92_RS13500	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
C3D92_RS13505	PF04002	RadC-like JAB domain
C3D92_RS13510	PF04199	Putative cyclase
C3D92_RS13515	PF03301	Tryptophan 2,3-dioxygenase
C3D92_RS13520	PF01197	Ribosomal protein L31
C3D92_RS13530	PF01554	MatE
C3D92_RS13545	PF18073	Rubredoxin metal binding domain
C3D92_RS13550	PF12034	Domain of unknown function (DUF3520)
C3D92_RS13550	PF12450	von Willebrand factor 
C3D92_RS13550	PF00092	von Willebrand factor type A domain
C3D92_RS13555	PF04542	Sigma-70 region 2 
C3D92_RS13555	PF04545	Sigma-70, region 4
C3D92_RS13575	PF01168	Alanine racemase, N-terminal domain
C3D92_RS13575	PF00842	Alanine racemase, C-terminal domain
C3D92_RS13590	PF01593	Flavin containing amine oxidoreductase
C3D92_RS13590	PF01593	Flavin containing amine oxidoreductase
C3D92_RS13595	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
C3D92_RS13605	PF01061	ABC-2 type transporter
C3D92_RS13610	PF00005	ABC transporter
C3D92_RS13630	PF02424	ApbE family
C3D92_RS13635	PF00667	FAD binding domain
C3D92_RS13635	PF00258	Flavodoxin
C3D92_RS13635	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS13645	PF07969	Amidohydrolase family
C3D92_RS13650	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS13650	PF03466	LysR substrate binding domain
C3D92_RS13660	PF09370	Phosphoenolpyruvate hydrolase-like
C3D92_RS13675	PF03212	Pertactin
C3D92_RS13675	PF03797	Autotransporter beta-domain
C3D92_RS13695	PF00004	ATPase family associated with various cellular activities (AAA)
C3D92_RS13695	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3D92_RS13695	PF02861	Clp amino terminal domain, pathogenicity island component
C3D92_RS13695	PF17871	AAA lid domain
C3D92_RS13695	PF07724	AAA domain (Cdc48 subfamily)
C3D92_RS13700	PF00027	Cyclic nucleotide-binding domain
C3D92_RS13700	PF13545	Crp-like helix-turn-helix domain
C3D92_RS13715	PF00293	NUDIX domain
C3D92_RS13720	PF12843	Putative quorum-sensing-regulated virulence factor
C3D92_RS13730	PF04542	Sigma-70 region 2 
C3D92_RS13730	PF12680	SnoaL-like domain
C3D92_RS13730	PF08281	Sigma-70, region 4
C3D92_RS13735	PF02627	Carboxymuconolactone decarboxylase family
C3D92_RS13765	PF00155	Aminotransferase class I and II
C3D92_RS13770	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS13775	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS13780	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS13785	PF00005	ABC transporter
C3D92_RS13805	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
C3D92_RS13830	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS13835	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3D92_RS13835	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
C3D92_RS13840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS13840	PF03466	LysR substrate binding domain
C3D92_RS13850	PF02016	LD-carboxypeptidase N-terminal domain
C3D92_RS13850	PF17676	LD-carboxypeptidase C-terminal domain
C3D92_RS13865	PF07690	Major Facilitator Superfamily
C3D92_RS13875	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS13875	PF03466	LysR substrate binding domain
C3D92_RS13880	PF13378	Enolase C-terminal domain-like
C3D92_RS13880	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
C3D92_RS13885	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS13905	PF02567	Phenazine biosynthesis-like protein
C3D92_RS13915	PF03239	Iron permease FTR1 family
C3D92_RS13925	PF10634	Fe2+ transport protein
C3D92_RS13930	PF07879	PHB/PHA accumulation regulator DNA-binding domain
C3D92_RS13930	PF05233	PHB accumulation regulatory domain
C3D92_RS13935	PF00106	short chain dehydrogenase
C3D92_RS13940	PF07167	Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
C3D92_RS13945	PF02578	Multi-copper polyphenol oxidoreductase laccase
C3D92_RS13950	PF00849	RNA pseudouridylate synthase
C3D92_RS13950	PF01479	S4 domain
C3D92_RS13955	PF13525	Outer membrane lipoprotein
C3D92_RS13960	PF04851	Type III restriction enzyme, res subunit
C3D92_RS13960	PF13307	Helicase C-terminal domain
C3D92_RS13965	PF09371	Tex-like protein N-terminal domain
C3D92_RS13965	PF16921	Tex protein YqgF-like domain
C3D92_RS13965	PF17674	HHH domain
C3D92_RS13965	PF00575	S1 RNA binding domain
C3D92_RS13970	PF00579	tRNA synthetases class I (W and Y)
C3D92_RS13995	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS14005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS14005	PF03466	LysR substrate binding domain
C3D92_RS14015	PF03969	AFG1-like ATPase
C3D92_RS14020	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS14020	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3D92_RS14025	PF02817	e3 binding domain
C3D92_RS14025	PF00364	Biotin-requiring enzyme
C3D92_RS14025	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3D92_RS14030	PF02779	Transketolase, pyrimidine binding domain
C3D92_RS14030	PF16870	2-oxoglutarate dehydrogenase C-terminal
C3D92_RS14030	PF00676	Dehydrogenase E1 component
C3D92_RS14030	PF16078	2-oxoglutarate dehydrogenase N-terminus
C3D92_RS14040	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS14045	PF17831	Pyruvate dehydrogenase E1 component middle domain
C3D92_RS14045	PF00456	Transketolase, thiamine diphosphate binding domain
C3D92_RS14050	PF01515	Phosphate acetyl/butaryl transferase
C3D92_RS14050	PF03949	Malic enzyme, NAD binding domain
C3D92_RS14050	PF00390	Malic enzyme, N-terminal domain
C3D92_RS14055	PF16970	Type-1 fimbrial protein, A
C3D92_RS14070	PF01272	Transcription elongation factor, GreA/GreB, C-term
C3D92_RS14070	PF03449	Transcription elongation factor, N-terminal
C3D92_RS14075	PF02811	PHP domain
C3D92_RS14085	PF13567	Domain of unknown function (DUF4131)
C3D92_RS14085	PF00753	Metallo-beta-lactamase superfamily
C3D92_RS14085	PF03772	Competence protein
C3D92_RS14110	PF01026	TatD related DNase
C3D92_RS14115	PF00005	ABC transporter
C3D92_RS14120	PF12704	MacB-like periplasmic core domain
C3D92_RS14120	PF02687	FtsX-like permease family
C3D92_RS14130	PF01368	DHH family
C3D92_RS14130	PF17768	RecJ OB domain
C3D92_RS14130	PF02272	DHHA1 domain
C3D92_RS14140	PF00106	short chain dehydrogenase
C3D92_RS14145	PF01336	OB-fold nucleic acid binding domain
C3D92_RS14145	PF00152	tRNA synthetases class II (D, K and N) 
C3D92_RS14155	PF17932	Tetracyclin repressor-like, C-terminal domain
C3D92_RS14155	PF00440	Bacterial regulatory proteins, tetR family
C3D92_RS14160	PF00501	AMP-binding enzyme
C3D92_RS14165	PF00005	ABC transporter
C3D92_RS14185	PF00005	ABC transporter
C3D92_RS14185	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS14195	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS14195	PF07689	KaiB domain
C3D92_RS14195	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS14200	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS14200	PF00072	Response regulator receiver domain
C3D92_RS14205	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
C3D92_RS14215	PF03631	Virulence factor BrkB
C3D92_RS14230	PF01207	Dihydrouridine synthase (Dus)
C3D92_RS14235	PF01636	Phosphotransferase enzyme family
C3D92_RS14260	PF01985	CRS1 / YhbY (CRM) domain
C3D92_RS14265	PF01728	FtsJ-like methyltransferase
C3D92_RS14270	PF06480	FtsH Extracellular
C3D92_RS14270	PF01434	Peptidase family M41
C3D92_RS14270	PF17862	AAA+ lid domain
C3D92_RS14270	PF00004	ATPase family associated with various cellular activities (AAA)
C3D92_RS14275	PF00809	Pterin binding enzyme
C3D92_RS14280	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
C3D92_RS14280	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
C3D92_RS14280	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
C3D92_RS14280	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
C3D92_RS14290	PF02541	Ppx/GppA phosphatase family
C3D92_RS14295	PF13089	Polyphosphate kinase N-terminal domain
C3D92_RS14295	PF17941	Polyphosphate kinase C-terminal domain 1
C3D92_RS14295	PF13090	Polyphosphate kinase C-terminal domain 2
C3D92_RS14295	PF02503	Polyphosphate kinase middle domain
C3D92_RS14300	PF12849	PBP superfamily domain
C3D92_RS14305	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS14310	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS14315	PF00005	ABC transporter
C3D92_RS14330	PF01337	Barstar (barnase inhibitor)
C3D92_RS14340	PF01515	Phosphate acetyl/butaryl transferase
C3D92_RS14340	PF00390	Malic enzyme, N-terminal domain
C3D92_RS14340	PF03949	Malic enzyme, NAD binding domain
C3D92_RS14350	PF00155	Aminotransferase class I and II
C3D92_RS14360	PF01464	Transglycosylase SLT domain
C3D92_RS14360	PF11873	Membrane-bound lytic murein transglycosylase C, N-terminal domain
C3D92_RS14365	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
C3D92_RS14390	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3D92_RS14390	PF10414	Sirohaem synthase dimerisation region
C3D92_RS14390	PF14824	Sirohaem biosynthesis protein central
C3D92_RS14395	PF03212	Pertactin
C3D92_RS14395	PF03797	Autotransporter beta-domain
C3D92_RS14410	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
C3D92_RS14415	PF02547	Queuosine biosynthesis protein
C3D92_RS14420	PF01702	Queuine tRNA-ribosyltransferase
C3D92_RS14425	PF02699	Preprotein translocase subunit
C3D92_RS14430	PF02355	Protein export membrane protein
C3D92_RS14430	PF13721	SecD export protein N-terminal TM region
C3D92_RS14430	PF07549	SecD/SecF GG Motif
C3D92_RS14435	PF07549	SecD/SecF GG Motif
C3D92_RS14435	PF02355	Protein export membrane protein
C3D92_RS14450	PF01938	TRAM domain
C3D92_RS14450	PF00919	Uncharacterized protein family UPF0004
C3D92_RS14450	PF04055	Radical SAM superfamily
C3D92_RS14455	PF02562	PhoH-like protein
C3D92_RS14460	PF02130	Uncharacterized protein family UPF0054
C3D92_RS14465	PF00571	CBS domain
C3D92_RS14465	PF03471	Transporter associated domain
C3D92_RS14470	PF00795	Carbon-nitrogen hydrolase
C3D92_RS14475	PF00248	Aldo/keto reductase family
C3D92_RS14500	PF04344	Chemotaxis phosphatase, CheZ
C3D92_RS14505	PF00072	Response regulator receiver domain
C3D92_RS14510	PF01339	CheB methylesterase
C3D92_RS14510	PF00072	Response regulator receiver domain
C3D92_RS14520	PF02203	Tar ligand binding domain homologue
C3D92_RS14520	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3D92_RS14520	PF00672	HAMP domain
C3D92_RS14525	PF01584	CheW-like domain
C3D92_RS14530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS14530	PF01627	Hpt domain
C3D92_RS14530	PF02895	Signal transducing histidine kinase, homodimeric domain
C3D92_RS14530	PF09078	CheY binding
C3D92_RS14530	PF01584	CheW-like domain
C3D92_RS14535	PF00072	Response regulator receiver domain
C3D92_RS14540	PF00691	OmpA family
C3D92_RS14540	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
C3D92_RS14545	PF01618	MotA/TolQ/ExbB proton channel family
C3D92_RS14550	PF05280	Flagellar transcriptional activator (FlhC)
C3D92_RS14555	PF05247	Flagellar transcriptional activator (FlhD)
C3D92_RS14560	PF04542	Sigma-70 region 2 
C3D92_RS14560	PF04539	Sigma-70 region 3
C3D92_RS14560	PF04545	Sigma-70, region 4
C3D92_RS14570	PF01176	Translation initiation factor 1A / IF-1
C3D92_RS14580	PF08525	Opacity-associated protein A N-terminal motif
C3D92_RS14580	PF01551	Peptidase family M23
C3D92_RS14580	PF01476	LysM domain
C3D92_RS14590	PF00994	Probable molybdopterin binding domain
C3D92_RS14600	PF03591	AzlC protein
C3D92_RS14610	PF00226	DnaJ domain
C3D92_RS14610	PF01556	DnaJ C terminal domain
C3D92_RS14630	PF02798	Glutathione S-transferase, N-terminal domain
C3D92_RS14630	PF14834	Glutathione S-transferase, C-terminal domain
C3D92_RS14635	PF11339	Protein of unknown function (DUF3141)
C3D92_RS14640	PF01515	Phosphate acetyl/butaryl transferase
C3D92_RS14645	PF00871	Acetokinase family
C3D92_RS14655	PF00162	Phosphoglycerate kinase
C3D92_RS14660	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C3D92_RS14660	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
C3D92_RS14665	PF00456	Transketolase, thiamine diphosphate binding domain
C3D92_RS14665	PF02780	Transketolase, C-terminal domain
C3D92_RS14665	PF02779	Transketolase, pyrimidine binding domain
C3D92_RS14670	PF04452	RNA methyltransferase
C3D92_RS14680	PF00669	Bacterial flagellin N-terminal helical region
C3D92_RS14680	PF00700	Bacterial flagellin C-terminal helical region
C3D92_RS14685	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3D92_RS14685	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS14690	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3D92_RS14690	PF02817	e3 binding domain
C3D92_RS14690	PF00364	Biotin-requiring enzyme
C3D92_RS14695	PF00456	Transketolase, thiamine diphosphate binding domain
C3D92_RS14695	PF17831	Pyruvate dehydrogenase E1 component middle domain
C3D92_RS14700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS14700	PF00989	PAS fold
C3D92_RS14700	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS14705	PF00196	Bacterial regulatory proteins, luxR family
C3D92_RS14705	PF00072	Response regulator receiver domain
C3D92_RS14710	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
C3D92_RS14710	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
C3D92_RS14715	PF01432	Peptidase family M3
C3D92_RS14720	PF02630	SCO1/SenC
C3D92_RS14730	PF02321	Outer membrane efflux protein
C3D92_RS14735	PF00873	AcrB/AcrD/AcrF family
C3D92_RS14745	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS14745	PF03466	LysR substrate binding domain
C3D92_RS14750	PF00849	RNA pseudouridylate synthase
C3D92_RS14750	PF01479	S4 domain
C3D92_RS14755	PF04345	Chorismate lyase
C3D92_RS14770	PF00248	Aldo/keto reductase family
C3D92_RS14780	PF00293	NUDIX domain
C3D92_RS14785	PF01245	Ribosomal protein L19
C3D92_RS14800	PF04055	Radical SAM superfamily
C3D92_RS14810	PF01507	Phosphoadenosine phosphosulfate reductase family
C3D92_RS14820	PF00005	ABC transporter
C3D92_RS14820	PF17850	CysA C-terminal regulatory domain
C3D92_RS14820	PF12857	TOBE-like domain
C3D92_RS14840	PF00578	AhpC/TSA family
C3D92_RS14840	PF10417	C-terminal domain of 1-Cys peroxiredoxin
C3D92_RS14845	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS14845	PF12806	Acetyl-CoA dehydrogenase C-terminal like
C3D92_RS14845	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS14845	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS14850	PF00766	Electron transfer flavoprotein FAD-binding domain
C3D92_RS14850	PF01012	Electron transfer flavoprotein domain
C3D92_RS14855	PF01012	Electron transfer flavoprotein domain
C3D92_RS14860	PF00850	Histone deacetylase domain
C3D92_RS14865	PF13406	Transglycosylase SLT domain
C3D92_RS14870	PF00291	Pyridoxal-phosphate dependent enzyme
C3D92_RS14880	PF10531	SLBB domain
C3D92_RS14885	PF01370	NAD dependent epimerase/dehydratase family
C3D92_RS14890	PF00294	pfkB family carbohydrate kinase
C3D92_RS14895	PF18073	Rubredoxin metal binding domain
C3D92_RS14905	PF00216	Bacterial DNA-binding protein
C3D92_RS14910	PF00575	S1 RNA binding domain
C3D92_RS14915	PF02224	Cytidylate kinase
C3D92_RS14920	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
C3D92_RS14925	PF02153	Prephenate dehydrogenase
C3D92_RS14930	PF01817	Chorismate mutase type II
C3D92_RS14930	PF00800	Prephenate dehydratase
C3D92_RS14930	PF01842	ACT domain
C3D92_RS14935	PF00266	Aminotransferase class-V
C3D92_RS14940	PF03989	DNA gyrase C-terminal domain, beta-propeller
C3D92_RS14940	PF00521	DNA gyrase/topoisomerase IV, subunit A
C3D92_RS14945	PF00691	OmpA family
C3D92_RS14955	PF13419	Haloacid dehalogenase-like hydrolase
C3D92_RS14960	PF07690	Major Facilitator Superfamily
C3D92_RS14995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS14995	PF03466	LysR substrate binding domain
C3D92_RS15000	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS15010	PF11798	IMS family HHH motif
C3D92_RS15010	PF00817	impB/mucB/samB family
C3D92_RS15010	PF11799	impB/mucB/samB family C-terminal domain
C3D92_RS15025	PF00326	Prolyl oligopeptidase family
C3D92_RS15030	PF17092	Penicillin-binding protein OB-like domain
C3D92_RS15030	PF00905	Penicillin binding protein transpeptidase domain
C3D92_RS15030	PF00912	Transglycosylase
C3D92_RS15035	PF00149	Calcineurin-like phosphoesterase
C3D92_RS15050	PF00248	Aldo/keto reductase family
C3D92_RS15055	PF00248	Aldo/keto reductase family
C3D92_RS15060	PF00664	ABC transporter transmembrane region
C3D92_RS15060	PF00005	ABC transporter
C3D92_RS15110	PF02785	Biotin carboxylase C-terminal domain
C3D92_RS15110	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3D92_RS15110	PF00289	Biotin carboxylase, N-terminal domain
C3D92_RS15115	PF07702	UTRA domain
C3D92_RS15115	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS15135	PF02436	Conserved carboxylase domain
C3D92_RS15135	PF00682	HMGL-like
C3D92_RS15135	PF00364	Biotin-requiring enzyme
C3D92_RS15140	PF00364	Biotin-requiring enzyme
C3D92_RS15150	PF01966	HD domain
C3D92_RS15170	PF07238	PilZ domain
C3D92_RS15170	PF07317	Flagellar regulator YcgR
C3D92_RS15190	PF05724	Thiopurine S-methyltransferase (TPMT)
C3D92_RS15195	PF00664	ABC transporter transmembrane region
C3D92_RS15195	PF00005	ABC transporter
C3D92_RS15210	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS15210	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS15210	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS15215	PF10369	Small subunit of acetolactate synthase
C3D92_RS15220	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
C3D92_RS15220	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
C3D92_RS15225	PF01066	CDP-alcohol phosphatidyltransferase
C3D92_RS15240	PF00312	Ribosomal protein S15
C3D92_RS15245	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
C3D92_RS15245	PF00575	S1 RNA binding domain
C3D92_RS15245	PF03725	3' exoribonuclease family, domain 2
C3D92_RS15245	PF01138	3' exoribonuclease family, domain 1
C3D92_RS15245	PF00013	KH domain
C3D92_RS15260	PF13291	ACT domain
C3D92_RS15260	PF00291	Pyridoxal-phosphate dependent enzyme
C3D92_RS15275	PF00550	Phosphopantetheine attachment site
C3D92_RS15275	PF08990	Erythronolide synthase docking
C3D92_RS15275	PF08659	KR domain
C3D92_RS15275	PF14765	Polyketide synthase dehydratase
C3D92_RS15275	PF00698	Acyl transferase domain
C3D92_RS15275	PF16197	Ketoacyl-synthetase C-terminal extension
C3D92_RS15275	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3D92_RS15275	PF08240	Alcohol dehydrogenase GroES-like domain
C3D92_RS15275	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3D92_RS15280	PF00121	Triosephosphate isomerase
C3D92_RS15285	PF03840	Preprotein translocase SecG subunit
C3D92_RS15295	PF02028	BCCT, betaine/carnitine/choline family transporter
C3D92_RS15305	PF07476	Methylaspartate ammonia-lyase C-terminus
C3D92_RS15305	PF05034	Methylaspartate ammonia-lyase N-terminus
C3D92_RS15310	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS15325	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS15340	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS15340	PF03466	LysR substrate binding domain
C3D92_RS15345	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3D92_RS15350	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
C3D92_RS15365	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS15370	PF01266	FAD dependent oxidoreductase
C3D92_RS15380	PF05378	Hydantoinase/oxoprolinase N-terminal region
C3D92_RS15380	PF01968	Hydantoinase/oxoprolinase
C3D92_RS15390	PF00127	Copper binding proteins, plastocyanin/azurin family
C3D92_RS15400	PF02321	Outer membrane efflux protein
C3D92_RS15405	PF00873	AcrB/AcrD/AcrF family
C3D92_RS15410	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
C3D92_RS15415	PF01638	HxlR-like helix-turn-helix
C3D92_RS15425	PF02028	BCCT, betaine/carnitine/choline family transporter
C3D92_RS15430	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS15430	PF03466	LysR substrate binding domain
C3D92_RS15435	PF00781	Diacylglycerol kinase catalytic domain
C3D92_RS15445	PF01569	PAP2 superfamily
C3D92_RS15475	PF13609	Gram-negative porin
C3D92_RS15480	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
C3D92_RS15485	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
C3D92_RS15490	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
C3D92_RS15495	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
C3D92_RS15505	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
C3D92_RS15505	PF10531	SLBB domain
C3D92_RS15505	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C3D92_RS15510	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
C3D92_RS15510	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C3D92_RS15510	PF00384	Molybdopterin oxidoreductase
C3D92_RS15515	PF00146	NADH dehydrogenase
C3D92_RS15520	PF12838	4Fe-4S dicluster domain
C3D92_RS15525	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
C3D92_RS15530	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
C3D92_RS15535	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
C3D92_RS15535	PF00361	Proton-conducting membrane transporter
C3D92_RS15540	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
C3D92_RS15540	PF00361	Proton-conducting membrane transporter
C3D92_RS15545	PF00361	Proton-conducting membrane transporter
C3D92_RS15555	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS15555	PF00593	TonB dependent receptor
C3D92_RS15560	PF00593	TonB dependent receptor
C3D92_RS15560	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS15575	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS15575	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS15575	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS15580	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS15585	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS15585	PF03466	LysR substrate binding domain
C3D92_RS15595	PF02559	CarD-like/TRCF domain
C3D92_RS15595	PF00270	DEAD/DEAH box helicase
C3D92_RS15595	PF00271	Helicase conserved C-terminal domain
C3D92_RS15595	PF03461	TRCF domain
C3D92_RS15595	PF17757	UvrB interaction domain
C3D92_RS15600	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
C3D92_RS15605	PF02542	YgbB family
C3D92_RS15620	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
C3D92_RS15625	PF11940	Domain of unknown function (DUF3458) Ig-like fold
C3D92_RS15625	PF01433	Peptidase family M1 domain
C3D92_RS15625	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
C3D92_RS15645	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS15645	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS15645	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS15655	PF09084	NMT1/THI5 like
C3D92_RS15660	PF00005	ABC transporter
C3D92_RS15665	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS15675	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS15675	PF00501	AMP-binding enzyme
C3D92_RS15680	PF08240	Alcohol dehydrogenase GroES-like domain
C3D92_RS15680	PF00107	Zinc-binding dehydrogenase
C3D92_RS15685	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS15685	PF07729	FCD domain
C3D92_RS15695	PF07729	FCD domain
C3D92_RS15695	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS15700	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS15700	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS15700	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS15720	PF01063	Amino-transferase class IV
C3D92_RS15725	PF00005	ABC transporter
C3D92_RS15730	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS15740	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS15745	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS15745	PF03466	LysR substrate binding domain
C3D92_RS15750	PF02321	Outer membrane efflux protein
C3D92_RS15755	PF13533	Biotin-lipoyl like
C3D92_RS15760	PF00005	ABC transporter
C3D92_RS15760	PF03412	Peptidase C39 family
C3D92_RS15760	PF00664	ABC transporter transmembrane region
C3D92_RS15765	PF02382	N-terminal domain in RTX protein
C3D92_RS15765	PF00353	RTX calcium-binding nonapeptide repeat (4 copies)
C3D92_RS15765	PF03497	Anthrax toxin LF subunit
C3D92_RS15775	PF02794	RTX toxin acyltransferase family
C3D92_RS15780	PF00171	Aldehyde dehydrogenase family
C3D92_RS15785	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS15795	PF01266	FAD dependent oxidoreductase
C3D92_RS15800	PF02538	Hydantoinase B/oxoprolinase
C3D92_RS15805	PF05378	Hydantoinase/oxoprolinase N-terminal region
C3D92_RS15805	PF01968	Hydantoinase/oxoprolinase
C3D92_RS15810	PF03466	LysR substrate binding domain
C3D92_RS15810	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS15820	PF00348	Polyprenyl synthetase
C3D92_RS15830	PF00829	Ribosomal prokaryotic L21 protein
C3D92_RS15835	PF01016	Ribosomal L27 protein
C3D92_RS15840	PF01018	GTP1/OBG
C3D92_RS15840	PF01926	50S ribosome-binding GTPase
C3D92_RS15845	PF01472	PUA domain
C3D92_RS15845	PF00696	Amino acid kinase family
C3D92_RS15895	PF16220	Domain of unknown function (DUF4880)
C3D92_RS15895	PF04773	FecR protein
C3D92_RS15900	PF00593	TonB dependent receptor
C3D92_RS15900	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS15905	PF04264	YceI-like domain
C3D92_RS15915	PF16653	Saccharopine dehydrogenase C-terminal domain
C3D92_RS15915	PF03435	Saccharopine dehydrogenase NADP binding domain
C3D92_RS15920	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
C3D92_RS15940	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS15945	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS15950	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS15955	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS15955	PF00005	ABC transporter
C3D92_RS15960	PF01425	Amidase
C3D92_RS15965	PF00202	Aminotransferase class-III
C3D92_RS15990	PF01329	Pterin 4 alpha carbinolamine dehydratase
C3D92_RS16000	PF00483	Nucleotidyl transferase
C3D92_RS16005	PF01636	Phosphotransferase enzyme family
C3D92_RS16010	PF04453	LPS transport system D
C3D92_RS16015	PF00639	PPIC-type PPIASE domain
C3D92_RS16015	PF09312	SurA N-terminal domain
C3D92_RS16020	PF00398	Ribosomal RNA adenine dimethylase
C3D92_RS16025	PF02595	Glycerate kinase family
C3D92_RS16030	PF00224	Pyruvate kinase, barrel domain
C3D92_RS16030	PF02887	Pyruvate kinase, alpha/beta domain
C3D92_RS16035	PF07670	Nucleoside recognition
C3D92_RS16060	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS16065	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS16070	PF00005	ABC transporter
C3D92_RS16075	PF01032	FecCD transport family
C3D92_RS16085	PF00691	OmpA family
C3D92_RS16090	PF04052	TolB amino-terminal domain
C3D92_RS16090	PF07676	WD40-like Beta Propeller Repeat
C3D92_RS16100	PF02472	Biopolymer transport protein ExbD/TolR
C3D92_RS16105	PF01618	MotA/TolQ/ExbB proton channel family
C3D92_RS16110	PF03061	Thioesterase superfamily
C3D92_RS16115	PF03129	Anticodon binding domain
C3D92_RS16115	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3D92_RS16115	PF04073	Aminoacyl-tRNA editing domain
C3D92_RS16120	PF00293	NUDIX domain
C3D92_RS16125	PF00072	Response regulator receiver domain
C3D92_RS16125	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS16135	PF02586	SOS response associated peptidase (SRAP)
C3D92_RS16210	PF06791	Prophage tail length tape measure protein
C3D92_RS16350	PF03180	NLPA lipoprotein
C3D92_RS16360	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
C3D92_RS16360	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
C3D92_RS16365	PF00005	ABC transporter
C3D92_RS16370	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS16370	PF00005	ABC transporter
C3D92_RS16375	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS16380	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS16385	PF13458	Periplasmic binding protein
C3D92_RS16390	PF01425	Amidase
C3D92_RS16395	PF00484	Carbonic anhydrase
C3D92_RS16410	PF00570	HRDC domain
C3D92_RS16410	PF16124	RecQ zinc-binding
C3D92_RS16410	PF00270	DEAD/DEAH box helicase
C3D92_RS16410	PF09382	RQC domain
C3D92_RS16410	PF00271	Helicase conserved C-terminal domain
C3D92_RS16415	PF05496	Holliday junction DNA helicase RuvB P-loop domain
C3D92_RS16415	PF05491	RuvB C-terminal winged helix domain
C3D92_RS16415	PF17864	RuvB AAA lid domain
C3D92_RS16420	PF00291	Pyridoxal-phosphate dependent enzyme
C3D92_RS16425	PF01370	NAD dependent epimerase/dehydratase family
C3D92_RS16430	PF07499	RuvA, C-terminal domain
C3D92_RS16430	PF01330	RuvA N terminal domain
C3D92_RS16435	PF02075	Crossover junction endodeoxyribonuclease RuvC
C3D92_RS16440	PF02142	MGS-like domain
C3D92_RS16440	PF01808	AICARFT/IMPCHase bienzyme
C3D92_RS16445	PF02954	Bacterial regulatory protein, Fis family
C3D92_RS16450	PF01207	Dihydrouridine synthase (Dus)
C3D92_RS16455	PF01494	FAD binding domain
C3D92_RS16465	PF05195	Aminopeptidase P, N-terminal domain
C3D92_RS16465	PF00557	Metallopeptidase family M24
C3D92_RS16490	PF13609	Gram-negative porin
C3D92_RS16500	PF00483	Nucleotidyl transferase
C3D92_RS16505	PF13181	Tetratricopeptide repeat
C3D92_RS16505	PF01435	Peptidase family M48
C3D92_RS16510	PF00561	alpha/beta hydrolase fold
C3D92_RS16525	PF01063	Amino-transferase class IV
C3D92_RS16540	PF00270	DEAD/DEAH box helicase
C3D92_RS16540	PF00271	Helicase conserved C-terminal domain
C3D92_RS16560	PF00994	Probable molybdopterin binding domain
C3D92_RS16560	PF02464	Competence-damaged protein
C3D92_RS16560	PF18146	Damage-inducible protein CinA KH domain
C3D92_RS16565	PF09339	IclR helix-turn-helix domain
C3D92_RS16565	PF01614	Bacterial transcriptional regulator
C3D92_RS16570	PF05785	Rho-activating domain of cytotoxic necrotizing factor
C3D92_RS16570	PF18807	Tripartite Tc toxins repeat
C3D92_RS16575	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS16585	PF01180	Dihydroorotate dehydrogenase
C3D92_RS16590	PF04376	Arginine-tRNA-protein transferase, N terminus
C3D92_RS16590	PF04377	Arginine-tRNA-protein transferase, C terminus
C3D92_RS16605	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS16605	PF03466	LysR substrate binding domain
C3D92_RS16645	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS16645	PF07729	FCD domain
C3D92_RS16650	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS16650	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS16650	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS16655	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS16660	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
C3D92_RS16665	PF00390	Malic enzyme, N-terminal domain
C3D92_RS16665	PF01515	Phosphate acetyl/butaryl transferase
C3D92_RS16665	PF03949	Malic enzyme, NAD binding domain
C3D92_RS16675	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS16680	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS16685	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS16685	PF00005	ABC transporter
C3D92_RS16700	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS16700	PF03466	LysR substrate binding domain
C3D92_RS16715	PF01022	Bacterial regulatory protein, arsR family
C3D92_RS16730	PF03594	Benzoate membrane transport protein
C3D92_RS16735	PF00037	4Fe-4S binding domain
C3D92_RS16740	PF01467	Cytidylyltransferase-like
C3D92_RS16750	PF00448	SRP54-type protein, GTPase domain
C3D92_RS16750	PF02881	SRP54-type protein, helical bundle domain
C3D92_RS16760	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS16765	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS16800	PF00925	GTP cyclohydrolase II
C3D92_RS16800	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
C3D92_RS16805	PF00885	6,7-dimethyl-8-ribityllumazine synthase
C3D92_RS16810	PF01029	NusB family
C3D92_RS16815	PF02769	AIR synthase related protein, C-terminal domain
C3D92_RS16815	PF00586	AIR synthase related protein, N-terminal domain
C3D92_RS16820	PF04608	Phosphatidylglycerophosphatase A
C3D92_RS16825	PF00994	Probable molybdopterin binding domain
C3D92_RS16825	PF18146	Damage-inducible protein CinA KH domain
C3D92_RS16825	PF02464	Competence-damaged protein
C3D92_RS16830	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
C3D92_RS16835	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS16840	PF01219	Prokaryotic diacylglycerol kinase
C3D92_RS16845	PF03631	Virulence factor BrkB
C3D92_RS16850	PF03212	Pertactin
C3D92_RS16850	PF03797	Autotransporter beta-domain
C3D92_RS16855	PF00118	TCP-1/cpn60 chaperonin family
C3D92_RS16860	PF00166	Chaperonin 10 Kd subunit
C3D92_RS16880	PF00890	FAD binding domain
C3D92_RS16895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS16895	PF03466	LysR substrate binding domain
C3D92_RS16900	PF00890	FAD binding domain
C3D92_RS16925	PF00990	Diguanylate cyclase, GGDEF domain
C3D92_RS16930	PF00072	Response regulator receiver domain
C3D92_RS16965	PF10017	Histidine-specific methyltransferase, SAM-dependent
C3D92_RS16975	PF13091	PLD-like domain
C3D92_RS16975	PF13396	Phospholipase_D-nuclease N-terminal
C3D92_RS16985	PF01645	Conserved region in glutamate synthase
C3D92_RS16990	PF04143	Sulphur transport
C3D92_RS16995	PF03547	Membrane transport protein
C3D92_RS17000	PF13673	Acetyltransferase (GNAT) domain
C3D92_RS17020	PF08206	Ribonuclease B OB domain
C3D92_RS17020	PF00773	RNB domain
C3D92_RS17020	PF08461	Ribonuclease R winged-helix domain
C3D92_RS17020	PF00575	S1 RNA binding domain
C3D92_RS17020	PF17876	Cold shock domain
C3D92_RS17025	PF08032	RNA 2'-O ribose methyltransferase substrate binding
C3D92_RS17025	PF00588	SpoU rRNA Methylase family
C3D92_RS17030	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3D92_RS17035	PF13640	2OG-Fe(II) oxygenase superfamily
C3D92_RS17035	PF18331	PKHD-type hydroxylase C-terminal domain
C3D92_RS17040	PF00216	Bacterial DNA-binding protein
C3D92_RS17055	PF01618	MotA/TolQ/ExbB proton channel family
C3D92_RS17060	PF02472	Biopolymer transport protein ExbD/TolR
C3D92_RS17065	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS17065	PF00072	Response regulator receiver domain
C3D92_RS17070	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS17070	PF08521	Two-component sensor kinase N-terminal
C3D92_RS17070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS17075	PF02705	K+ potassium transporter
C3D92_RS17080	PF00764	Arginosuccinate synthase
C3D92_RS17085	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
C3D92_RS17085	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
C3D92_RS17090	PF00202	Aminotransferase class-III
C3D92_RS17100	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS17100	PF03466	LysR substrate binding domain
C3D92_RS17110	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3D92_RS17110	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3D92_RS17115	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS17130	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS17130	PF07729	FCD domain
C3D92_RS17140	PF07690	Major Facilitator Superfamily
C3D92_RS17150	PF02627	Carboxymuconolactone decarboxylase family
C3D92_RS17155	PF00578	AhpC/TSA family
C3D92_RS17160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS17160	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS17160	PF00672	HAMP domain
C3D92_RS17170	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS17170	PF00072	Response regulator receiver domain
C3D92_RS17175	PF00814	Glycoprotease family
C3D92_RS17180	PF03167	Uracil DNA glycosylase superfamily
C3D92_RS17185	PF07690	Major Facilitator Superfamily
C3D92_RS17190	PF02463	RecF/RecN/SMC N terminal domain
C3D92_RS17190	PF06470	SMC proteins Flexible Hinge Domain
C3D92_RS17200	PF12826	Helix-hairpin-helix motif
C3D92_RS17200	PF03120	NAD-dependent DNA ligase OB-fold domain
C3D92_RS17200	PF01653	NAD-dependent DNA ligase adenylation domain
C3D92_RS17200	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
C3D92_RS17200	PF00533	BRCA1 C Terminus (BRCT) domain
C3D92_RS17215	PF04279	Intracellular septation protein A 
C3D92_RS17220	PF01641	SelR domain
C3D92_RS17225	PF00005	ABC transporter
C3D92_RS17230	PF02361	Cobalt transport protein
C3D92_RS17235	PF02632	BioY family
C3D92_RS17250	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS17250	PF00005	ABC transporter
C3D92_RS17255	PF01063	Amino-transferase class IV
C3D92_RS17270	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS17280	PF00005	ABC transporter
C3D92_RS17285	PF00005	ABC transporter
C3D92_RS17285	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS17290	PF10576	Iron-sulfur binding domain of endonuclease III
C3D92_RS17290	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3D92_RS17290	PF00633	Helix-hairpin-helix motif
C3D92_RS17295	PF04060	Putative Fe-S cluster
C3D92_RS17305	PF00970	Oxidoreductase FAD-binding domain
C3D92_RS17305	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS17310	PF11953	Domain of unknown function (DUF3470)
C3D92_RS17310	PF00037	4Fe-4S binding domain
C3D92_RS17315	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
C3D92_RS17315	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
C3D92_RS17320	PF01042	Endoribonuclease L-PSP
C3D92_RS17330	PF06167	Glucose-regulated metallo-peptidase M90
C3D92_RS17335	PF02824	TGS domain
C3D92_RS17335	PF13291	ACT domain
C3D92_RS17335	PF04607	Region found in RelA / SpoT proteins
C3D92_RS17340	PF01546	Peptidase family M20/M25/M40
C3D92_RS17340	PF07687	Peptidase dimerisation domain
C3D92_RS17345	PF00291	Pyridoxal-phosphate dependent enzyme
C3D92_RS17350	PF00290	Tryptophan synthase alpha chain
C3D92_RS17355	PF17848	Acetyl-coA carboxylase zinc finger domain
C3D92_RS17355	PF01039	Carboxyl transferase domain
C3D92_RS17375	PF00575	S1 RNA binding domain
C3D92_RS17375	PF10150	Ribonuclease E/G family
C3D92_RS17375	PF12111	Polyribonucleotide phosphorylase C terminal
C3D92_RS17380	PF00849	RNA pseudouridylate synthase
C3D92_RS17380	PF01479	S4 domain
C3D92_RS17385	PF13419	Haloacid dehalogenase-like hydrolase
C3D92_RS17390	PF00174	Oxidoreductase molybdopterin binding domain
C3D92_RS17395	PF01794	Ferric reductase like transmembrane component
C3D92_RS17410	PF02515	CoA-transferase family III
C3D92_RS17415	PF03466	LysR substrate binding domain
C3D92_RS17415	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS17425	PF02515	CoA-transferase family III
C3D92_RS17440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS17440	PF03466	LysR substrate binding domain
C3D92_RS17445	PF01042	Endoribonuclease L-PSP
C3D92_RS17450	PF00970	Oxidoreductase FAD-binding domain
C3D92_RS17450	PF00042	Globin
C3D92_RS17450	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS17455	PF02667	Short chain fatty acid transporter
C3D92_RS17460	PF00171	Aldehyde dehydrogenase family
C3D92_RS17465	PF07729	FCD domain
C3D92_RS17465	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS17475	PF00313	'Cold-shock' DNA-binding domain
C3D92_RS17480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS17480	PF03466	LysR substrate binding domain
C3D92_RS17505	PF00108	Thiolase, N-terminal domain
C3D92_RS17505	PF02803	Thiolase, C-terminal domain
C3D92_RS17515	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS17515	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS17515	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS17520	PF03466	LysR substrate binding domain
C3D92_RS17520	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS17525	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS17530	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS17535	PF02515	CoA-transferase family III
C3D92_RS17540	PF03741	Integral membrane protein TerC family
C3D92_RS17540	PF03471	Transporter associated domain
C3D92_RS17545	PF02308	MgtC family
C3D92_RS17555	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS17555	PF00155	Aminotransferase class I and II
C3D92_RS17565	PF00582	Universal stress protein family
C3D92_RS17570	PF00009	Elongation factor Tu GTP binding domain
C3D92_RS17570	PF00679	Elongation factor G C-terminus
C3D92_RS17570	PF03144	Elongation factor Tu domain 2
C3D92_RS17570	PF14492	Elongation Factor G, domain II
C3D92_RS17570	PF03764	Elongation factor G, domain IV
C3D92_RS17580	PF00701	Dihydrodipicolinate synthetase family
C3D92_RS17585	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS17585	PF03466	LysR substrate binding domain
C3D92_RS17590	PF02515	CoA-transferase family III
C3D92_RS17595	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS17600	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS17600	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS17600	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS17605	PF01575	MaoC like domain
C3D92_RS17620	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C3D92_RS17620	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
C3D92_RS17625	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS17630	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS17630	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS17630	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS17635	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS17640	PF13607	Succinyl-CoA ligase like flavodoxin domain
C3D92_RS17640	PF13380	CoA binding domain
C3D92_RS17650	PF00676	Dehydrogenase E1 component
C3D92_RS17655	PF02779	Transketolase, pyrimidine binding domain
C3D92_RS17655	PF02780	Transketolase, C-terminal domain
C3D92_RS17660	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS17665	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3D92_RS17665	PF02817	e3 binding domain
C3D92_RS17665	PF00364	Biotin-requiring enzyme
C3D92_RS17670	PF02770	Acyl-CoA dehydrogenase, middle domain
C3D92_RS17670	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3D92_RS17670	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3D92_RS17675	PF00501	AMP-binding enzyme
C3D92_RS17675	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS17685	PF13458	Periplasmic binding protein
C3D92_RS17690	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS17695	PF00005	ABC transporter
C3D92_RS17695	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3D92_RS17700	PF00005	ABC transporter
C3D92_RS17705	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS17705	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3D92_RS17720	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS17735	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS17750	PF00899	ThiF family
C3D92_RS17755	PF13180	PDZ domain
C3D92_RS17755	PF03572	Peptidase family S41
C3D92_RS17760	PF01551	Peptidase family M23
C3D92_RS17765	PF00300	Histidine phosphatase superfamily (branch 1)
C3D92_RS17770	PF17773	UPF0176 acylphosphatase like domain
C3D92_RS17770	PF12368	Rhodanase C-terminal
C3D92_RS17770	PF00581	Rhodanese-like domain
C3D92_RS17775	PF00462	Glutaredoxin
C3D92_RS17780	PF02556	Preprotein translocase subunit SecB
C3D92_RS17785	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
C3D92_RS17785	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
C3D92_RS17790	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS17795	PF00588	SpoU rRNA Methylase family
C3D92_RS17805	PF08241	Methyltransferase domain
C3D92_RS17810	PF04107	Glutamate-cysteine ligase family 2(GCS2)
C3D92_RS17815	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
C3D92_RS17825	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS17830	PF00005	ABC transporter
C3D92_RS17840	PF01799	[2Fe-2S] binding domain
C3D92_RS17840	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS17845	PF00941	FAD binding domain in molybdopterin dehydrogenase
C3D92_RS17845	PF03450	CO dehydrogenase flavoprotein C-terminal domain
C3D92_RS17850	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C3D92_RS17850	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
C3D92_RS17855	PF03480	Bacterial extracellular solute-binding protein, family 7
C3D92_RS17860	PF00355	Rieske [2Fe-2S] domain
C3D92_RS17865	PF14759	Reductase C-terminal
C3D92_RS17865	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS17870	PF00355	Rieske [2Fe-2S] domain
C3D92_RS17870	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
C3D92_RS17880	PF00857	Isochorismatase family
C3D92_RS17895	PF17645	Arylmalonate decarboxylase
C3D92_RS17905	PF12804	MobA-like NTP transferase domain
C3D92_RS17915	PF01047	MarR family
C3D92_RS17920	PF02386	Cation transport protein
C3D92_RS17925	PF02254	TrkA-N domain
C3D92_RS17925	PF02080	TrkA-C domain
C3D92_RS17930	PF00072	Response regulator receiver domain
C3D92_RS17930	PF02954	Bacterial regulatory protein, Fis family
C3D92_RS17930	PF00158	Sigma-54 interaction domain
C3D92_RS17935	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS17935	PF00672	HAMP domain
C3D92_RS17935	PF00989	PAS fold
C3D92_RS17935	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS17945	PF01029	NusB family
C3D92_RS17945	PF01189	16S rRNA methyltransferase RsmB/F
C3D92_RS17955	PF03447	Homoserine dehydrogenase, NAD binding domain
C3D92_RS17955	PF01958	Domain of unknown function DUF108
C3D92_RS17985	PF01810	LysE type translocator
C3D92_RS17990	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS17990	PF03466	LysR substrate binding domain
C3D92_RS18000	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS18010	PF00155	Aminotransferase class I and II
C3D92_RS18015	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS18025	PF00682	HMGL-like
C3D92_RS18030	PF02481	DNA recombination-mediator protein A
C3D92_RS18030	PF17782	DprA winged helix domain
C3D92_RS18035	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS18040	PF00266	Aminotransferase class-V
C3D92_RS18045	PF01327	Polypeptide deformylase
C3D92_RS18060	PF02911	Formyl transferase, C-terminal domain
C3D92_RS18060	PF00551	Formyl transferase
C3D92_RS18070	PF13419	Haloacid dehalogenase-like hydrolase
C3D92_RS18080	PF03641	Possible lysine decarboxylase
C3D92_RS18090	PF04055	Radical SAM superfamily
C3D92_RS18090	PF18693	TRAM domain
C3D92_RS18090	PF00919	Uncharacterized protein family UPF0004
C3D92_RS18095	PF01361	Tautomerase enzyme
C3D92_RS18100	PF01266	FAD dependent oxidoreductase
C3D92_RS18105	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS18110	PF07729	FCD domain
C3D92_RS18110	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS18125	PF00202	Aminotransferase class-III
C3D92_RS18130	PF00491	Arginase family
C3D92_RS18140	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS18145	PF02627	Carboxymuconolactone decarboxylase family
C3D92_RS18150	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS18155	PF09339	IclR helix-turn-helix domain
C3D92_RS18155	PF01614	Bacterial transcriptional regulator
C3D92_RS18160	PF00501	AMP-binding enzyme
C3D92_RS18160	PF13193	AMP-binding enzyme C-terminal domain
C3D92_RS18165	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS18175	PF12951	Passenger-associated-transport-repeat
C3D92_RS18175	PF12951	Passenger-associated-transport-repeat
C3D92_RS18205	PF14031	Putative serine dehydratase domain
C3D92_RS18205	PF01168	Alanine racemase, N-terminal domain
C3D92_RS18210	PF07411	Domain of unknown function (DUF1508)
C3D92_RS18215	PF01145	SPFH domain / Band 7 family
C3D92_RS18225	PF01042	Endoribonuclease L-PSP
C3D92_RS18275	PF03837	RecT family
C3D92_RS18310	PF00589	Phage integrase family
C3D92_RS18330	PF03466	LysR substrate binding domain
C3D92_RS18330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS18345	PF02096	60Kd inner membrane protein
C3D92_RS18345	PF14849	YidC periplasmic domain
C3D92_RS18350	PF01809	Putative membrane protein insertion efficiency factor
C3D92_RS18355	PF00825	Ribonuclease P
C3D92_RS18360	PF00468	Ribosomal protein L34
C3D92_RS18365	PF08299	Bacterial dnaA protein helix-turn-helix
C3D92_RS18365	PF00308	Bacterial dnaA  protein
C3D92_RS18365	PF11638	DnaA N-terminal domain
C3D92_RS18370	PF02768	DNA polymerase III beta subunit, C-terminal domain
C3D92_RS18370	PF00712	DNA polymerase III beta subunit, N-terminal domain
C3D92_RS18370	PF02767	DNA polymerase III beta subunit, central domain
C3D92_RS18375	PF00204	DNA gyrase B
C3D92_RS18375	PF18053	DNA gyrase B subunit insert domain
C3D92_RS18375	PF00986	DNA gyrase B subunit, carboxyl terminus
C3D92_RS18375	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS18375	PF01751	Toprim domain
C3D92_RS18380	PF01614	Bacterial transcriptional regulator
C3D92_RS18380	PF09339	IclR helix-turn-helix domain
C3D92_RS18385	PF01425	Amidase
C3D92_RS18390	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS18400	PF01070	FMN-dependent dehydrogenase
C3D92_RS18425	PF00376	MerR family regulatory protein
C3D92_RS18425	PF09278	MerR, DNA binding
C3D92_RS18450	PF02803	Thiolase, C-terminal domain
C3D92_RS18450	PF00108	Thiolase, N-terminal domain
C3D92_RS18455	PF01039	Carboxyl transferase domain
C3D92_RS18460	PF00289	Biotin carboxylase, N-terminal domain
C3D92_RS18460	PF00364	Biotin-requiring enzyme
C3D92_RS18460	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3D92_RS18460	PF02785	Biotin carboxylase C-terminal domain
C3D92_RS18470	PF00202	Aminotransferase class-III
C3D92_RS18475	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS18480	PF01168	Alanine racemase, N-terminal domain
C3D92_RS18480	PF14031	Putative serine dehydratase domain
C3D92_RS18485	PF16868	NMT1-like family
C3D92_RS18495	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS18495	PF00593	TonB dependent receptor
C3D92_RS18500	PF04361	Protein of unknown function (DUF494)
C3D92_RS18515	PF01751	Toprim domain
C3D92_RS18515	PF01131	DNA topoisomerase
C3D92_RS18525	PF00005	ABC transporter
C3D92_RS18530	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS18540	PF00171	Aldehyde dehydrogenase family
C3D92_RS18550	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3D92_RS18550	PF00205	Thiamine pyrophosphate enzyme, central domain
C3D92_RS18550	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3D92_RS18555	PF01037	Lrp/AsnC ligand binding domain
C3D92_RS18560	PF01062	Bestrophin, RFP-TM, chloride channel
C3D92_RS18570	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
C3D92_RS18585	PF02310	B12 binding domain
C3D92_RS18585	PF00809	Pterin binding enzyme
C3D92_RS18585	PF02574	Homocysteine S-methyltransferase
C3D92_RS18585	PF02965	Vitamin B12 dependent methionine synthase, activation domain
C3D92_RS18585	PF02607	B12 binding domain
C3D92_RS18590	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS18590	PF00593	TonB dependent receptor
C3D92_RS18595	PF01497	Periplasmic binding protein
C3D92_RS18600	PF05690	Thiazole biosynthesis protein ThiG
C3D92_RS18605	PF08543	Phosphomethylpyrimidine kinase
C3D92_RS18620	PF02321	Outer membrane efflux protein
C3D92_RS18625	PF01467	Cytidylyltransferase-like
C3D92_RS18635	PF01594	AI-2E family transporter
C3D92_RS18645	PF07885	Ion channel
C3D92_RS18645	PF02254	TrkA-N domain
C3D92_RS18660	PF00164	Ribosomal protein S12/S23
C3D92_RS18665	PF00177	Ribosomal protein S7p/S5e
C3D92_RS18670	PF03144	Elongation factor Tu domain 2
C3D92_RS18670	PF03764	Elongation factor G, domain IV
C3D92_RS18670	PF14492	Elongation Factor G, domain II
C3D92_RS18670	PF00679	Elongation factor G C-terminus
C3D92_RS18670	PF00009	Elongation factor Tu GTP binding domain
C3D92_RS18675	PF03143	Elongation factor Tu C-terminal domain
C3D92_RS18675	PF03144	Elongation factor Tu domain 2
C3D92_RS18675	PF00009	Elongation factor Tu GTP binding domain
C3D92_RS18680	PF00338	Ribosomal protein S10p/S20e
C3D92_RS18685	PF00297	Ribosomal protein L3
C3D92_RS18690	PF00573	Ribosomal protein L4/L1 family
C3D92_RS18695	PF00276	Ribosomal protein L23
C3D92_RS18700	PF00181	Ribosomal Proteins L2, RNA binding domain
C3D92_RS18700	PF03947	Ribosomal Proteins L2, C-terminal domain
C3D92_RS18705	PF00203	Ribosomal protein S19
C3D92_RS18710	PF00237	Ribosomal protein L22p/L17e
C3D92_RS18715	PF07650	KH domain
C3D92_RS18715	PF00189	Ribosomal protein S3, C-terminal domain
C3D92_RS18720	PF00252	Ribosomal protein L16p/L10e
C3D92_RS18725	PF00831	Ribosomal L29 protein
C3D92_RS18730	PF00366	Ribosomal protein S17
C3D92_RS18740	PF00171	Aldehyde dehydrogenase family
C3D92_RS18750	PF00238	Ribosomal protein L14p/L23e
C3D92_RS18755	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
C3D92_RS18760	PF00673	ribosomal L5P family C-terminus
C3D92_RS18760	PF00281	Ribosomal protein L5
C3D92_RS18765	PF00253	Ribosomal protein S14p/S29e
C3D92_RS18770	PF00410	Ribosomal protein S8
C3D92_RS18775	PF00347	Ribosomal protein L6
C3D92_RS18780	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
C3D92_RS18785	PF00333	Ribosomal protein S5, N-terminal domain
C3D92_RS18785	PF03719	Ribosomal protein S5, C-terminal domain
C3D92_RS18790	PF00327	Ribosomal protein L30p/L7e
C3D92_RS18795	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
C3D92_RS18800	PF00344	SecY translocase
C3D92_RS18805	PF01176	Translation initiation factor 1A / IF-1
C3D92_RS18810	PF00444	Ribosomal protein L36
C3D92_RS18815	PF00416	Ribosomal protein S13/S18
C3D92_RS18820	PF00411	Ribosomal protein S11
C3D92_RS18825	PF01479	S4 domain
C3D92_RS18825	PF00163	Ribosomal protein S4/S9 N-terminal domain
C3D92_RS18830	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
C3D92_RS18830	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
C3D92_RS18830	PF01000	RNA polymerase Rpb3/RpoA insert domain
C3D92_RS18835	PF01196	Ribosomal protein L17
C3D92_RS18840	PF01230	HIT domain
C3D92_RS18845	PF03091	CutA1 divalent ion tolerance protein
C3D92_RS18850	PF11412	Disulphide bond corrector protein DsbC
C3D92_RS18850	PF02683	Cytochrome C biogenesis protein transmembrane region
C3D92_RS18855	PF00892	EamA-like transporter family
C3D92_RS18860	PF00490	Delta-aminolevulinic acid dehydratase
C3D92_RS18865	PF01926	50S ribosome-binding GTPase
C3D92_RS18870	PF00034	Cytochrome c
C3D92_RS18875	PF05140	ResB-like family 
C3D92_RS18880	PF01578	Cytochrome C assembly protein
C3D92_RS18885	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
C3D92_RS18885	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
C3D92_RS18890	PF13627	Prokaryotic lipoprotein-attachment site
C3D92_RS18895	PF01491	Frataxin-like domain
C3D92_RS18900	PF00905	Penicillin binding protein transpeptidase domain
C3D92_RS18900	PF00912	Transglycosylase
C3D92_RS18900	PF17092	Penicillin-binding protein OB-like domain
C3D92_RS18905	PF01202	Shikimate kinase
C3D92_RS18910	PF01761	3-dehydroquinate synthase
C3D92_RS18915	PF01966	HD domain
C3D92_RS18915	PF13286	Phosphohydrolase-associated domain
C3D92_RS18920	PF00043	Glutathione S-transferase, C-terminal domain
C3D92_RS18920	PF13417	Glutathione S-transferase, N-terminal domain
C3D92_RS18925	PF17760	UvrA interaction domain
C3D92_RS18925	PF17755	UvrA DNA-binding domain
C3D92_RS18930	PF07690	Major Facilitator Superfamily
C3D92_RS18935	PF00436	Single-strand binding protein family
C3D92_RS18940	PF07715	TonB-dependent Receptor Plug Domain
C3D92_RS18940	PF00593	TonB dependent receptor
C3D92_RS18950	PF03328	HpcH/HpaI aldolase/citrate lyase family
C3D92_RS18960	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS18970	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS18970	PF03466	LysR substrate binding domain
C3D92_RS18975	PF01979	Amidohydrolase family
C3D92_RS18980	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS18985	PF00534	Glycosyl transferases group 1
C3D92_RS18985	PF13439	Glycosyltransferase Family 4
C3D92_RS18995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS18995	PF03466	LysR substrate binding domain
C3D92_RS19005	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19010	PF00005	ABC transporter
C3D92_RS19030	PF01274	Malate synthase
C3D92_RS19050	PF01040	UbiA prenyltransferase family
C3D92_RS19055	PF00155	Aminotransferase class I and II
C3D92_RS19060	PF13185	GAF domain
C3D92_RS19065	PF00701	Dihydrodipicolinate synthetase family
C3D92_RS19080	PF01476	LysM domain
C3D92_RS19080	PF04972	BON domain
C3D92_RS19085	PF05690	Thiazole biosynthesis protein ThiG
C3D92_RS19085	PF02597	ThiS family
C3D92_RS19090	PF00561	alpha/beta hydrolase fold
C3D92_RS19095	PF02390	Putative methyltransferase 
C3D92_RS19110	PF00682	HMGL-like
C3D92_RS19115	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS19135	PF07702	UTRA domain
C3D92_RS19135	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS19140	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS19150	PF00392	Bacterial regulatory proteins, gntR family
C3D92_RS19150	PF07702	UTRA domain
C3D92_RS19155	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19165	PF00005	ABC transporter
C3D92_RS19170	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS19175	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS19180	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3D92_RS19180	PF16197	Ketoacyl-synthetase C-terminal extension
C3D92_RS19180	PF08990	Erythronolide synthase docking
C3D92_RS19180	PF08240	Alcohol dehydrogenase GroES-like domain
C3D92_RS19180	PF08659	KR domain
C3D92_RS19180	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3D92_RS19180	PF00550	Phosphopantetheine attachment site
C3D92_RS19180	PF14765	Polyketide synthase dehydratase
C3D92_RS19180	PF00698	Acyl transferase domain
C3D92_RS19185	PF02515	CoA-transferase family III
C3D92_RS19190	PF00440	Bacterial regulatory proteins, tetR family
C3D92_RS19195	PF09297	NADH pyrophosphatase zinc ribbon domain
C3D92_RS19195	PF00293	NUDIX domain
C3D92_RS19200	PF00175	Oxidoreductase NAD-binding domain 
C3D92_RS19200	PF00970	Oxidoreductase FAD-binding domain
C3D92_RS19200	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3D92_RS19205	PF01425	Amidase
C3D92_RS19215	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3D92_RS19215	PF03466	LysR substrate binding domain
C3D92_RS19220	PF13458	Periplasmic binding protein
C3D92_RS19230	PF00005	ABC transporter
C3D92_RS19240	PF02653	Branched-chain amino acid transport system / permease component
C3D92_RS19250	PF00355	Rieske [2Fe-2S] domain
C3D92_RS19265	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
C3D92_RS19265	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
C3D92_RS19280	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3D92_RS19280	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3D92_RS19280	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3D92_RS19285	PF07690	Major Facilitator Superfamily
C3D92_RS19290	PF14602	Hexapeptide repeat of succinyl-transferase
C3D92_RS19290	PF00132	Bacterial transferase hexapeptide (six repeats)
C3D92_RS19290	PF12804	MobA-like NTP transferase domain
C3D92_RS19310	PF02630	SCO1/SenC
C3D92_RS19315	PF01040	UbiA prenyltransferase family
C3D92_RS19320	PF02628	Cytochrome oxidase assembly protein
C3D92_RS19340	PF00510	Cytochrome c oxidase subunit III
C3D92_RS19355	PF00115	Cytochrome C and Quinol oxidase polypeptide I
C3D92_RS19360	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
C3D92_RS19360	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
C3D92_RS19370	PF00999	Sodium/hydrogen exchanger family
C3D92_RS19375	PF00149	Calcineurin-like phosphoesterase
C3D92_RS19380	PF04542	Sigma-70 region 2 
C3D92_RS19380	PF04545	Sigma-70, region 4
C3D92_RS19380	PF00140	Sigma-70 factor, region 1.2
C3D92_RS19390	PF00756	Putative esterase
C3D92_RS19395	PF00107	Zinc-binding dehydrogenase
C3D92_RS19395	PF08240	Alcohol dehydrogenase GroES-like domain
C3D92_RS19405	PF04898	Glutamate synthase central domain
C3D92_RS19405	PF01645	Conserved region in glutamate synthase
C3D92_RS19405	PF01493	GXGXG motif
C3D92_RS19405	PF00310	Glutamine amidotransferases class-II
C3D92_RS19410	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
C3D92_RS19410	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3D92_RS19415	PF03922	OmpW family
C3D92_RS19420	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS19425	PF00005	ABC transporter
C3D92_RS19430	PF02405	Permease MlaE
C3D92_RS19435	PF02470	MlaD protein
C3D92_RS19440	PF04333	MlaA lipoprotein
C3D92_RS19455	PF01061	ABC-2 type transporter
C3D92_RS19465	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
C3D92_RS19470	PF01634	ATP phosphoribosyltransferase
C3D92_RS19475	PF00815	Histidinol dehydrogenase
C3D92_RS19480	PF00155	Aminotransferase class I and II
C3D92_RS19485	PF00475	Imidazoleglycerol-phosphate dehydratase
C3D92_RS19490	PF00117	Glutamine amidotransferase class-I
C3D92_RS19495	PF00977	Histidine biosynthesis protein
C3D92_RS19500	PF00977	Histidine biosynthesis protein
C3D92_RS19505	PF01502	Phosphoribosyl-AMP cyclohydrolase
C3D92_RS19510	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
C3D92_RS19515	PF01230	HIT domain
C3D92_RS19520	PF02416	mttA/Hcf106 family
C3D92_RS19525	PF02416	mttA/Hcf106 family
C3D92_RS19530	PF00902	Sec-independent protein translocase protein (TatC)
C3D92_RS19540	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS19545	PF02917	Pertussis toxin, subunit 1
C3D92_RS19550	PF02918	Pertussis toxin, subunit 2 and 3, C-terminal domain
C3D92_RS19550	PF03440	Aerolysin/Pertussis toxin (APT) domain
C3D92_RS19555	PF09275	Pertussis toxin S4 subunit
C3D92_RS19560	PF09276	Pertussis toxin S5 subunit 
C3D92_RS19565	PF03440	Aerolysin/Pertussis toxin (APT) domain
C3D92_RS19565	PF02918	Pertussis toxin, subunit 2 and 3, C-terminal domain
C3D92_RS19570	PF04956	TrbC/VIRB2 family
C3D92_RS19575	PF05101	Type IV secretory pathway, VirB3-like protein
C3D92_RS19580	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
C3D92_RS19585	PF04610	TrbL/VirB6 plasmid conjugal transfer protein
C3D92_RS19595	PF04335	VirB8 protein
C3D92_RS19600	PF03524	Conjugal transfer protein
C3D92_RS19605	PF03743	Bacterial conjugation TrbI-like protein 
C3D92_RS19610	PF00437	Type II/IV secretion system protein
C3D92_RS19620	PF00892	EamA-like transporter family
C3D92_RS19640	PF10396	GTP-binding protein TrmE N-terminus
C3D92_RS19640	PF01926	50S ribosome-binding GTPase
C3D92_RS19640	PF12631	MnmE helical domain
C3D92_RS19645	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS19650	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19655	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19655	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3D92_RS19670	PF01960	ArgJ family
C3D92_RS19680	PF00293	NUDIX domain
C3D92_RS19705	PF02321	Outer membrane efflux protein
C3D92_RS19710	PF00873	AcrB/AcrD/AcrF family
C3D92_RS19715	PF00873	AcrB/AcrD/AcrF family
C3D92_RS19720	PF13533	Biotin-lipoyl like
C3D92_RS19725	PF07072	Cell division protein
C3D92_RS19730	PF01121	Dephospho-CoA kinase
C3D92_RS19735	PF06750	Bacterial Peptidase A24 N-terminal domain
C3D92_RS19735	PF01478	Type IV leader peptidase family
C3D92_RS19750	PF02569	Pantoate-beta-alanine ligase
C3D92_RS19755	PF02616	Segregation and condensation protein ScpA
C3D92_RS19765	PF07690	Major Facilitator Superfamily
C3D92_RS19770	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3D92_RS19770	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3D92_RS19780	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS19785	PF00005	ABC transporter
C3D92_RS19790	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19795	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19800	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3D92_RS19805	PF00005	ABC transporter
C3D92_RS19810	PF18075	FtsX extracellular domain
C3D92_RS19815	PF03975	CheD chemotactic sensory transduction
C3D92_RS19825	PF14815	NUDIX domain
C3D92_RS19825	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3D92_RS19825	PF00633	Helix-hairpin-helix motif
C3D92_RS19825	PF10576	Iron-sulfur binding domain of endonuclease III
C3D92_RS19835	PF08241	Methyltransferase domain
C3D92_RS19845	PF02515	CoA-transferase family III
C3D92_RS19850	PF02515	CoA-transferase family III
C3D92_RS19860	PF03401	Tripartite tricarboxylate transporter family receptor
C3D92_RS19865	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS19870	PF00881	Nitroreductase family
C3D92_RS19880	PF00682	HMGL-like
C3D92_RS19885	PF00378	Enoyl-CoA hydratase/isomerase
C3D92_RS19890	PF02515	CoA-transferase family III
C3D92_RS19905	PF06628	Catalase-related immune-responsive
C3D92_RS19905	PF00199	Catalase
C3D92_RS19910	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19915	PF00005	ABC transporter
C3D92_RS19925	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
C3D92_RS19930	PF01546	Peptidase family M20/M25/M40
C3D92_RS19930	PF07687	Peptidase dimerisation domain
C3D92_RS19935	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS19935	PF00005	ABC transporter
C3D92_RS19940	PF00005	ABC transporter
C3D92_RS19940	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3D92_RS19945	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19945	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3D92_RS19950	PF00528	Binding-protein-dependent transport system inner membrane component
C3D92_RS19955	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3D92_RS19960	PF10396	GTP-binding protein TrmE N-terminus
C3D92_RS19960	PF12631	MnmE helical domain
C3D92_RS19960	PF01926	50S ribosome-binding GTPase
C3D92_RS19970	PF00072	Response regulator receiver domain
C3D92_RS19970	PF00486	Transcriptional regulatory protein, C terminal
C3D92_RS19975	PF00512	His Kinase A (phospho-acceptor) domain
C3D92_RS19975	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3D92_RS19990	PF01970	Tripartite tricarboxylate transporter TctA family
C3D92_RS19995	PF00155	Aminotransferase class I and II
C3D92_RS20000	PF00313	'Cold-shock' DNA-binding domain
