AKI39_RS00125	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS00125	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS00125	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS00125	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS00125	PWY-5723	Rubisco shunt
AKI39_RS00125	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS00125	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS00125	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS00125	PWY-7003	glycerol degradation to butanol
AKI39_RS00125	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS00125	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS00135	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS00135	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS00135	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS00135	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS00135	PWY-5723	Rubisco shunt
AKI39_RS00135	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS00135	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS00135	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS00135	PWY-7003	glycerol degradation to butanol
AKI39_RS00135	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS00135	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS00160	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS00290	PWY-5694	allantoin degradation to glyoxylate I
AKI39_RS00290	PWY-5705	allantoin degradation to glyoxylate III
AKI39_RS00320	PWY-6749	CMP-legionaminate biosynthesis I
AKI39_RS00335	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AKI39_RS00345	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AKI39_RS00345	PWY-5667	CDP-diacylglycerol biosynthesis I
AKI39_RS00345	PWY-6453	stigma estolide biosynthesis
AKI39_RS00345	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AKI39_RS00345	PWY-7587	oleate biosynthesis III (cyanobacteria)
AKI39_RS00405	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS00405	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS00405	PWY-6692	Fe(II) oxidation
AKI39_RS00405	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS00435	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS00435	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS00435	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS00435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS00480	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AKI39_RS00485	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AKI39_RS00485	PWY-3162	L-tryptophan degradation V (side chain pathway)
AKI39_RS00485	PWY-5057	L-valine degradation II
AKI39_RS00485	PWY-5076	L-leucine degradation III
AKI39_RS00485	PWY-5078	L-isoleucine degradation II
AKI39_RS00485	PWY-5079	L-phenylalanine degradation III
AKI39_RS00485	PWY-5082	L-methionine degradation III
AKI39_RS00485	PWY-5480	pyruvate fermentation to ethanol I
AKI39_RS00485	PWY-5486	pyruvate fermentation to ethanol II
AKI39_RS00485	PWY-5751	phenylethanol biosynthesis
AKI39_RS00485	PWY-6313	serotonin degradation
AKI39_RS00485	PWY-6333	acetaldehyde biosynthesis I
AKI39_RS00485	PWY-6342	noradrenaline and adrenaline degradation
AKI39_RS00485	PWY-6454	vancomycin resistance I
AKI39_RS00485	PWY-6587	pyruvate fermentation to ethanol III
AKI39_RS00485	PWY-6802	salidroside biosynthesis
AKI39_RS00485	PWY-6871	3-methylbutanol biosynthesis
AKI39_RS00485	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS00485	PWY-7013	L-1,2-propanediol degradation
AKI39_RS00485	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS00485	PWY-7118	chitin degradation to ethanol
AKI39_RS00485	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AKI39_RS00560	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AKI39_RS00560	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AKI39_RS00650	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS00650	PWY-6692	Fe(II) oxidation
AKI39_RS00650	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AKI39_RS00650	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS00760	PWY-6871	3-methylbutanol biosynthesis
AKI39_RS00790	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS00825	PWY-6936	seleno-amino acid biosynthesis
AKI39_RS00855	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS00855	PWY-5743	3-hydroxypropanoate cycle
AKI39_RS00855	PWY-5744	glyoxylate assimilation
AKI39_RS00855	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS00855	PWY-6679	jadomycin biosynthesis
AKI39_RS00855	PWY-6722	candicidin biosynthesis
AKI39_RS00855	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS00875	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS00905	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS00905	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS00905	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS00905	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AKI39_RS00905	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AKI39_RS00905	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AKI39_RS00905	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS00920	PWY-6167	flavin biosynthesis II (archaea)
AKI39_RS00920	PWY-6168	flavin biosynthesis III (fungi)
AKI39_RS00935	PWY-6654	phosphopantothenate biosynthesis III
AKI39_RS00965	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS00965	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS00965	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS00965	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS00965	PWY-5723	Rubisco shunt
AKI39_RS00965	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS00965	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS00965	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS00965	PWY-7003	glycerol degradation to butanol
AKI39_RS00965	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS00965	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS00970	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS00970	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS00970	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS00970	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS00970	PWY-5723	Rubisco shunt
AKI39_RS00970	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS00970	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS00970	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS00970	PWY-7003	glycerol degradation to butanol
AKI39_RS00970	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS00970	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS01295	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS01295	PWY-6549	L-glutamine biosynthesis III
AKI39_RS01295	PWY-6728	methylaspartate cycle
AKI39_RS01295	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS01295	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS01295	PWY-7254	TCA cycle VII (acetate-producers)
AKI39_RS01295	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AKI39_RS01430	PWY-5381	pyridine nucleotide cycling (plants)
AKI39_RS01445	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AKI39_RS01455	PWY-2201	folate transformations I
AKI39_RS01515	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AKI39_RS01515	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AKI39_RS01545	PWY-1361	benzoyl-CoA degradation I (aerobic)
AKI39_RS01545	PWY-5109	2-methylbutanoate biosynthesis
AKI39_RS01545	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AKI39_RS01545	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AKI39_RS01545	PWY-5177	glutaryl-CoA degradation
AKI39_RS01545	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS01545	PWY-6435	4-hydroxybenzoate biosynthesis V
AKI39_RS01545	PWY-6583	pyruvate fermentation to butanol I
AKI39_RS01545	PWY-6863	pyruvate fermentation to hexanol
AKI39_RS01545	PWY-6883	pyruvate fermentation to butanol II
AKI39_RS01545	PWY-6944	androstenedione degradation
AKI39_RS01545	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AKI39_RS01545	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AKI39_RS01545	PWY-7007	methyl ketone biosynthesis
AKI39_RS01545	PWY-7046	4-coumarate degradation (anaerobic)
AKI39_RS01545	PWY-7094	fatty acid salvage
AKI39_RS01545	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AKI39_RS01545	PWY-735	jasmonic acid biosynthesis
AKI39_RS01545	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AKI39_RS01545	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AKI39_RS01545	PWY-7726	AKI39_RS01545
AKI39_RS01555	PWY-3341	L-proline biosynthesis III
AKI39_RS01555	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AKI39_RS01610	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AKI39_RS01610	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AKI39_RS01610	PWY-6936	seleno-amino acid biosynthesis
AKI39_RS01610	PWY-702	L-methionine biosynthesis II
AKI39_RS01695	PWY-6703	preQ<sub>0</sub> biosynthesis
AKI39_RS01705	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS01705	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS01705	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS01705	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS01775	PWY-5941	glycogen degradation II (eukaryotic)
AKI39_RS01775	PWY-6731	starch degradation III
AKI39_RS01775	PWY-6737	starch degradation V
AKI39_RS01775	PWY-7238	sucrose biosynthesis II
AKI39_RS01875	PWY-5667	CDP-diacylglycerol biosynthesis I
AKI39_RS01875	PWY-5981	CDP-diacylglycerol biosynthesis III
AKI39_RS01915	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS01915	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS01915	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS01915	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS01915	PWY-5723	Rubisco shunt
AKI39_RS01915	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS01915	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS01915	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS01915	PWY-7003	glycerol degradation to butanol
AKI39_RS01915	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS01915	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS01920	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS01920	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AKI39_RS01920	PWY-7242	D-fructuronate degradation
AKI39_RS01920	PWY-7310	D-glucosaminate degradation
AKI39_RS01920	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AKI39_RS01925	PWY-7130	L-glucose degradation
AKI39_RS02050	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AKI39_RS02075	PWY-6123	inosine-5'-phosphate biosynthesis I
AKI39_RS02075	PWY-6124	inosine-5'-phosphate biosynthesis II
AKI39_RS02075	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS02075	PWY-7234	inosine-5'-phosphate biosynthesis III
AKI39_RS02080	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS02080	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS02080	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS02080	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS02080	PWY-5723	Rubisco shunt
AKI39_RS02080	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS02080	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS02080	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS02080	PWY-7003	glycerol degradation to butanol
AKI39_RS02080	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS02080	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS02185	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AKI39_RS02185	PWY-6153	autoinducer AI-2 biosynthesis I
AKI39_RS02185	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AKI39_RS02215	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS02280	PWY-5642	2,4-dinitrotoluene degradation
AKI39_RS02280	PWY-6373	acrylate degradation
AKI39_RS02295	PWY-3841	folate transformations II
AKI39_RS02295	PWY-6614	tetrahydrofolate biosynthesis
AKI39_RS02300	PWY-3841	folate transformations II
AKI39_RS02300	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS02300	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS02300	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AKI39_RS02300	PWY-7199	pyrimidine deoxyribonucleosides salvage
AKI39_RS02300	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AKI39_RS02325	PWY-6749	CMP-legionaminate biosynthesis I
AKI39_RS02405	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS02425	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AKI39_RS02560	PWY-6825	phosphatidylcholine biosynthesis V
AKI39_RS02575	PWY-6167	flavin biosynthesis II (archaea)
AKI39_RS02575	PWY-6168	flavin biosynthesis III (fungi)
AKI39_RS02575	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AKI39_RS02580	PWY-6167	flavin biosynthesis II (archaea)
AKI39_RS02580	PWY-6168	flavin biosynthesis III (fungi)
AKI39_RS02590	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AKI39_RS02590	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AKI39_RS02590	PWY-6896	thiamin salvage I
AKI39_RS02590	PWY-6897	thiamin salvage II
AKI39_RS02595	PWY-5269	cardiolipin biosynthesis II
AKI39_RS02595	PWY-5668	cardiolipin biosynthesis I
AKI39_RS02605	PWY-5686	UMP biosynthesis
AKI39_RS02615	PWY-7039	phosphatidate metabolism, as a signaling molecule
AKI39_RS02660	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS02660	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS02660	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS02660	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS02660	PWY-5723	Rubisco shunt
AKI39_RS02660	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS02660	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS02660	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS02660	PWY-7003	glycerol degradation to butanol
AKI39_RS02660	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS02660	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS02745	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AKI39_RS02750	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AKI39_RS02750	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AKI39_RS02750	PWY-6897	thiamin salvage II
AKI39_RS02750	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AKI39_RS02750	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AKI39_RS02750	PWY-7356	thiamin salvage IV (yeast)
AKI39_RS02750	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AKI39_RS02795	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AKI39_RS02850	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AKI39_RS02850	PWY-6416	quinate degradation II
AKI39_RS02850	PWY-6707	gallate biosynthesis
AKI39_RS02895	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AKI39_RS02895	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS02895	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AKI39_RS02895	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AKI39_RS02895	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS02895	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS02895	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS02895	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AKI39_RS02900	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AKI39_RS02900	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS02900	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AKI39_RS02900	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AKI39_RS02900	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS02900	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS02900	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS02900	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AKI39_RS02920	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AKI39_RS02925	PWY-5392	reductive TCA cycle II
AKI39_RS02925	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS02925	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS02925	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS02925	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS02925	PWY-6728	methylaspartate cycle
AKI39_RS02925	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS02925	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS02985	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS02985	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS03020	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS03020	PWY-181	photorespiration
AKI39_RS03020	PWY-2161	folate polyglutamylation
AKI39_RS03020	PWY-2201	folate transformations I
AKI39_RS03020	PWY-3661	glycine betaine degradation I
AKI39_RS03020	PWY-3661-1	glycine betaine degradation II (mammalian)
AKI39_RS03020	PWY-3841	folate transformations II
AKI39_RS03020	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS03030	PWY-5525	D-glucuronate degradation I
AKI39_RS03035	PWY-6167	flavin biosynthesis II (archaea)
AKI39_RS03035	PWY-6168	flavin biosynthesis III (fungi)
AKI39_RS03035	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS03360	PWY-6123	inosine-5'-phosphate biosynthesis I
AKI39_RS03360	PWY-6124	inosine-5'-phosphate biosynthesis II
AKI39_RS03360	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS03360	PWY-7234	inosine-5'-phosphate biosynthesis III
AKI39_RS03415	PWY-4983	L-citrulline-nitric oxide cycle
AKI39_RS03415	PWY-4984	urea cycle
AKI39_RS03415	PWY-5	canavanine biosynthesis
AKI39_RS03415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS03415	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS03455	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS03510	PWY-5316	nicotine biosynthesis
AKI39_RS03510	PWY-5381	pyridine nucleotide cycling (plants)
AKI39_RS03510	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AKI39_RS03510	PWY-7342	superpathway of nicotine biosynthesis
AKI39_RS03520	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AKI39_RS03520	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AKI39_RS03520	PWY-5989	stearate biosynthesis II (bacteria and plants)
AKI39_RS03520	PWY-6113	superpathway of mycolate biosynthesis
AKI39_RS03520	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AKI39_RS03520	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AKI39_RS03520	PWY-7663	gondoate biosynthesis (anaerobic)
AKI39_RS03520	PWY-7664	oleate biosynthesis IV (anaerobic)
AKI39_RS03520	PWYG-321	mycolate biosynthesis
AKI39_RS03530	PWY-5386	methylglyoxal degradation I
AKI39_RS03650	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS03650	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS03650	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS03650	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS03650	PWY-5723	Rubisco shunt
AKI39_RS03650	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS03650	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS03650	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS03650	PWY-7003	glycerol degradation to butanol
AKI39_RS03650	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS03650	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS03710	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS03825	PWY-1881	formate oxidation to CO<sub>2</sub>
AKI39_RS03825	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS03825	PWY-6696	oxalate degradation III
AKI39_RS03850	PWY-6823	molybdenum cofactor biosynthesis
AKI39_RS03855	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AKI39_RS03855	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AKI39_RS03860	PWY-6823	molybdenum cofactor biosynthesis
AKI39_RS03870	PWY-6823	molybdenum cofactor biosynthesis
AKI39_RS04045	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AKI39_RS04060	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AKI39_RS04065	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AKI39_RS04065	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AKI39_RS04065	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AKI39_RS04075	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AKI39_RS04175	PWY-7425	2-chloroacrylate degradation I
AKI39_RS04200	PWY-6700	queuosine biosynthesis
AKI39_RS04205	PWY-6700	queuosine biosynthesis
AKI39_RS04210	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AKI39_RS04210	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AKI39_RS04215	PWY-7183	pyrimidine nucleobases salvage I
AKI39_RS04220	PWY-5194	siroheme biosynthesis
AKI39_RS04220	PWY-5441	S-methyl-L-methionine cycle
AKI39_RS04220	PWY-702	L-methionine biosynthesis II
AKI39_RS04220	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AKI39_RS04245	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AKI39_RS04245	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AKI39_RS04245	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AKI39_RS04245	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AKI39_RS04245	PWY-6978	plastoquinol-9 biosynthesis II
AKI39_RS04265	PWY-1281	sulfoacetaldehyde degradation I
AKI39_RS04265	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AKI39_RS04265	PWY-5482	pyruvate fermentation to acetate II
AKI39_RS04265	PWY-5485	pyruvate fermentation to acetate IV
AKI39_RS04265	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS04265	PWY-6637	sulfolactate degradation II
AKI39_RS04265	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AKI39_RS04275	PWY-2201	folate transformations I
AKI39_RS04280	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AKI39_RS04280	PWY-5723	Rubisco shunt
AKI39_RS04280	PWY-6891	thiazole biosynthesis II (Bacillus)
AKI39_RS04280	PWY-6892	thiazole biosynthesis I (E. coli)
AKI39_RS04280	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS04280	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS04285	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS04285	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS04285	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS04285	PWY-7003	glycerol degradation to butanol
AKI39_RS04290	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS04290	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS04290	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS04290	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS04290	PWY-7003	glycerol degradation to butanol
AKI39_RS04375	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS04375	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS04375	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS04375	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS04375	PWY-5723	Rubisco shunt
AKI39_RS04375	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AKI39_RS04375	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS04375	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS04375	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS04375	PWY-7003	glycerol degradation to butanol
AKI39_RS04375	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS04375	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS04380	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS04380	PWY-5743	3-hydroxypropanoate cycle
AKI39_RS04380	PWY-5744	glyoxylate assimilation
AKI39_RS04380	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS04380	PWY-6679	jadomycin biosynthesis
AKI39_RS04380	PWY-6722	candicidin biosynthesis
AKI39_RS04380	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS04385	PWY-5392	reductive TCA cycle II
AKI39_RS04385	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS04385	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS04385	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS04385	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS04385	PWY-6728	methylaspartate cycle
AKI39_RS04385	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS04385	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS04425	PWY-5532	adenosine nucleotides degradation IV
AKI39_RS04430	PWY-5532	adenosine nucleotides degradation IV
AKI39_RS04435	PWY-7399	methylphosphonate degradation II
AKI39_RS04445	PWY-7399	methylphosphonate degradation II
AKI39_RS04460	PWY-7399	methylphosphonate degradation II
AKI39_RS04470	PWY-7399	methylphosphonate degradation II
AKI39_RS04475	PWY-7399	methylphosphonate degradation II
AKI39_RS04515	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS04515	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AKI39_RS04515	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS04515	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS04515	PWY-7385	1,3-propanediol biosynthesis (engineered)
AKI39_RS04520	PWY-6123	inosine-5'-phosphate biosynthesis I
AKI39_RS04520	PWY-6124	inosine-5'-phosphate biosynthesis II
AKI39_RS04520	PWY-7234	inosine-5'-phosphate biosynthesis III
AKI39_RS04530	PWY-6123	inosine-5'-phosphate biosynthesis I
AKI39_RS04530	PWY-7234	inosine-5'-phosphate biosynthesis III
AKI39_RS04640	PWY-2201	folate transformations I
AKI39_RS04640	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS04655	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AKI39_RS04655	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AKI39_RS04690	PWY-5958	acridone alkaloid biosynthesis
AKI39_RS04690	PWY-6543	4-aminobenzoate biosynthesis
AKI39_RS04690	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AKI39_RS04690	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AKI39_RS04705	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS04705	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AKI39_RS04705	PWY-7242	D-fructuronate degradation
AKI39_RS04705	PWY-7310	D-glucosaminate degradation
AKI39_RS04705	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AKI39_RS04775	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AKI39_RS04835	PWY-6123	inosine-5'-phosphate biosynthesis I
AKI39_RS04835	PWY-6124	inosine-5'-phosphate biosynthesis II
AKI39_RS04835	PWY-7234	inosine-5'-phosphate biosynthesis III
AKI39_RS04885	PWY-3801	sucrose degradation II (sucrose synthase)
AKI39_RS04885	PWY-6527	stachyose degradation
AKI39_RS04885	PWY-7238	sucrose biosynthesis II
AKI39_RS04885	PWY-7343	UDP-glucose biosynthesis
AKI39_RS04910	PWY-5057	L-valine degradation II
AKI39_RS04910	PWY-5076	L-leucine degradation III
AKI39_RS04910	PWY-5078	L-isoleucine degradation II
AKI39_RS04910	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS04910	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS04910	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS04910	PWY-5108	L-isoleucine biosynthesis V
AKI39_RS04960	PWY-5686	UMP biosynthesis
AKI39_RS05015	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AKI39_RS05035	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS05065	PWY-6654	phosphopantothenate biosynthesis III
AKI39_RS05210	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AKI39_RS05210	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AKI39_RS05210	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AKI39_RS05210	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AKI39_RS05210	PWY-6978	plastoquinol-9 biosynthesis II
AKI39_RS05340	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS05340	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS05340	PWY-6692	Fe(II) oxidation
AKI39_RS05340	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS05345	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS05345	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS05345	PWY-6692	Fe(II) oxidation
AKI39_RS05345	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS05490	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AKI39_RS05490	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AKI39_RS05595	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS05595	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS05595	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS05595	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS05595	PWY-5723	Rubisco shunt
AKI39_RS05595	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS05595	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS05595	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS05595	PWY-7003	glycerol degradation to butanol
AKI39_RS05595	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS05595	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS05640	PWY-5647	2-nitrobenzoate degradation I
AKI39_RS05640	PWY-5652	2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA
AKI39_RS05640	PWY-5654	2-amino-3-carboxymuconate semialdehyde degradation to 2-oxopentenoate
AKI39_RS05670	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AKI39_RS05670	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AKI39_RS05675	PWY-2941	L-lysine biosynthesis II
AKI39_RS05675	PWY-2942	L-lysine biosynthesis III
AKI39_RS05675	PWY-5097	L-lysine biosynthesis VI
AKI39_RS05695	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AKI39_RS05695	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AKI39_RS05695	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AKI39_RS05745	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS05790	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS05790	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS05790	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS05790	PWY-5723	Rubisco shunt
AKI39_RS05790	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS05790	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS05790	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS05790	PWY-7003	glycerol degradation to butanol
AKI39_RS05790	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS05790	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS05805	PWY-5386	methylglyoxal degradation I
AKI39_RS05815	PWY-6832	2-aminoethylphosphonate degradation II
AKI39_RS05850	PWY-5392	reductive TCA cycle II
AKI39_RS05850	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AKI39_RS05850	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS05850	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS05850	PWY-6728	methylaspartate cycle
AKI39_RS05850	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS05850	PWY-7254	TCA cycle VII (acetate-producers)
AKI39_RS05850	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS05860	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AKI39_RS05860	PWY-6148	tetrahydromethanopterin biosynthesis
AKI39_RS05860	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AKI39_RS05860	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AKI39_RS05880	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AKI39_RS05880	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AKI39_RS05880	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AKI39_RS05890	PWY-2781	<i>cis</i>-zeatin biosynthesis
AKI39_RS05915	PWY-5392	reductive TCA cycle II
AKI39_RS05915	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AKI39_RS05915	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS05915	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS05915	PWY-6728	methylaspartate cycle
AKI39_RS05915	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS05915	PWY-7254	TCA cycle VII (acetate-producers)
AKI39_RS05915	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS06005	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS06005	PWY-5686	UMP biosynthesis
AKI39_RS06005	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS06010	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS06010	PWY-5686	UMP biosynthesis
AKI39_RS06010	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS06055	PWY-6614	tetrahydrofolate biosynthesis
AKI39_RS06060	PWY-6749	CMP-legionaminate biosynthesis I
AKI39_RS06110	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS06110	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS06110	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS06110	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS06110	PWY-5723	Rubisco shunt
AKI39_RS06110	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS06110	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS06110	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS06110	PWY-7003	glycerol degradation to butanol
AKI39_RS06110	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS06110	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS06210	PWY-6683	sulfate reduction III (assimilatory)
AKI39_RS06370	PWY-6803	phosphatidylcholine acyl editing
AKI39_RS06370	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AKI39_RS06370	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AKI39_RS06370	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AKI39_RS06515	PWY-6683	sulfate reduction III (assimilatory)
AKI39_RS06525	PWY-5194	siroheme biosynthesis
AKI39_RS06525	PWY-5441	S-methyl-L-methionine cycle
AKI39_RS06525	PWY-702	L-methionine biosynthesis II
AKI39_RS06525	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AKI39_RS06630	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS06630	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS06630	PWY-6692	Fe(II) oxidation
AKI39_RS06630	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS06660	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AKI39_RS06805	PWY-2941	L-lysine biosynthesis II
AKI39_RS06805	PWY-2942	L-lysine biosynthesis III
AKI39_RS06805	PWY-5097	L-lysine biosynthesis VI
AKI39_RS06865	PWY-6936	seleno-amino acid biosynthesis
AKI39_RS06970	PWY-6004	glycine betaine biosynthesis V (from glycine)
AKI39_RS06975	PWY-2301	<i>myo</i>-inositol biosynthesis
AKI39_RS06975	PWY-4702	phytate degradation I
AKI39_RS06975	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AKI39_RS06985	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AKI39_RS07015	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS07015	PWY-5743	3-hydroxypropanoate cycle
AKI39_RS07015	PWY-5744	glyoxylate assimilation
AKI39_RS07015	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS07015	PWY-6679	jadomycin biosynthesis
AKI39_RS07015	PWY-6722	candicidin biosynthesis
AKI39_RS07015	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS07025	PWY-2941	L-lysine biosynthesis II
AKI39_RS07025	PWY-2942	L-lysine biosynthesis III
AKI39_RS07025	PWY-5097	L-lysine biosynthesis VI
AKI39_RS07025	PWY-6559	spermidine biosynthesis II
AKI39_RS07025	PWY-6562	norspermidine biosynthesis
AKI39_RS07025	PWY-7153	grixazone biosynthesis
AKI39_RS07045	PWY-6454	vancomycin resistance I
AKI39_RS07045	PWY-6455	vancomycin resistance II
AKI39_RS07055	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AKI39_RS07055	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AKI39_RS07160	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS07160	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS07160	PWY-6692	Fe(II) oxidation
AKI39_RS07160	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS07175	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS07175	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AKI39_RS07175	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AKI39_RS07175	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS07175	PWY-6728	methylaspartate cycle
AKI39_RS07175	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS07175	PWY-7254	TCA cycle VII (acetate-producers)
AKI39_RS07175	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS07355	PWY-5481	pyruvate fermentation to lactate
AKI39_RS07355	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AKI39_RS07355	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS07360	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AKI39_RS07360	PWY-5739	GDP-D-perosamine biosynthesis
AKI39_RS07360	PWY-5740	GDP-L-colitose biosynthesis
AKI39_RS07360	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AKI39_RS07360	PWY-7573	GDP-mycosamine biosynthesis
AKI39_RS07365	PWY-5659	GDP-mannose biosynthesis
AKI39_RS07365	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AKI39_RS07375	PWY-6655	xanthan biosynthesis
AKI39_RS07375	PWY-6658	acetan biosynthesis
AKI39_RS07390	PWY-6749	CMP-legionaminate biosynthesis I
AKI39_RS07395	PWY-3821	galactose degradation III
AKI39_RS07395	PWY-6317	galactose degradation I (Leloir pathway)
AKI39_RS07395	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AKI39_RS07395	PWY-6527	stachyose degradation
AKI39_RS07395	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AKI39_RS07395	PWY-7344	UDP-D-galactose biosynthesis
AKI39_RS07605	PWY-5381	pyridine nucleotide cycling (plants)
AKI39_RS07625	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS07640	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS07640	PWY-5743	3-hydroxypropanoate cycle
AKI39_RS07640	PWY-5744	glyoxylate assimilation
AKI39_RS07640	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS07640	PWY-6679	jadomycin biosynthesis
AKI39_RS07640	PWY-6722	candicidin biosynthesis
AKI39_RS07640	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS07675	PWY-2201	folate transformations I
AKI39_RS07700	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS07705	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS07705	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AKI39_RS07705	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS07710	PWY-5367	petroselinate biosynthesis
AKI39_RS07710	PWY-5515	L-arabinose degradation II
AKI39_RS07710	PWY-5525	D-glucuronate degradation I
AKI39_RS07710	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AKI39_RS07710	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AKI39_RS07710	PWY-5989	stearate biosynthesis II (bacteria and plants)
AKI39_RS07710	PWY-5994	palmitate biosynthesis I (animals and fungi)
AKI39_RS07710	PWY-6113	superpathway of mycolate biosynthesis
AKI39_RS07710	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AKI39_RS07710	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AKI39_RS07710	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS07710	PWY-7663	gondoate biosynthesis (anaerobic)
AKI39_RS07710	PWY-7664	oleate biosynthesis IV (anaerobic)
AKI39_RS07710	PWYG-321	mycolate biosynthesis
AKI39_RS07810	PWY-5642	2,4-dinitrotoluene degradation
AKI39_RS07810	PWY-6373	acrylate degradation
AKI39_RS07845	PWY-3941	&beta;-alanine biosynthesis II
AKI39_RS07845	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS07845	PWY-5747	2-methylcitrate cycle II
AKI39_RS07845	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AKI39_RS07845	PWY-7118	chitin degradation to ethanol
AKI39_RS07885	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AKI39_RS07885	PWY-7118	chitin degradation to ethanol
AKI39_RS07975	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS07980	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS07995	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AKI39_RS07995	PWY-7177	UTP and CTP dephosphorylation II
AKI39_RS07995	PWY-7185	UTP and CTP dephosphorylation I
AKI39_RS08000	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS08000	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS08000	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS08000	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS08000	PWY-5723	Rubisco shunt
AKI39_RS08000	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS08000	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS08000	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS08000	PWY-7003	glycerol degradation to butanol
AKI39_RS08000	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS08000	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS08055	PWY-6825	phosphatidylcholine biosynthesis V
AKI39_RS08065	PWY-3341	L-proline biosynthesis III
AKI39_RS08065	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AKI39_RS08225	PWY-6012	acyl carrier protein metabolism I
AKI39_RS08225	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AKI39_RS08230	PWY-6902	chitin degradation II
AKI39_RS08240	PWY-5269	cardiolipin biosynthesis II
AKI39_RS08240	PWY-5668	cardiolipin biosynthesis I
AKI39_RS08245	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS08245	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS08245	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS08245	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS08245	PWY-5723	Rubisco shunt
AKI39_RS08245	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS08245	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS08245	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS08245	PWY-7003	glycerol degradation to butanol
AKI39_RS08245	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS08245	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS08255	PWY-6700	queuosine biosynthesis
AKI39_RS08325	PWY-5941	glycogen degradation II (eukaryotic)
AKI39_RS08325	PWY-6724	starch degradation II
AKI39_RS08325	PWY-6737	starch degradation V
AKI39_RS08325	PWY-7238	sucrose biosynthesis II
AKI39_RS08370	PWY-5663	tetrahydrobiopterin biosynthesis I
AKI39_RS08370	PWY-5664	tetrahydrobiopterin biosynthesis II
AKI39_RS08370	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AKI39_RS08370	PWY-6703	preQ<sub>0</sub> biosynthesis
AKI39_RS08370	PWY-6983	tetrahydrobiopterin biosynthesis III
AKI39_RS08370	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AKI39_RS08385	PWY-6728	methylaspartate cycle
AKI39_RS08385	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS08385	PWY-7118	chitin degradation to ethanol
AKI39_RS08385	PWY-7294	xylose degradation IV
AKI39_RS08385	PWY-7295	L-arabinose degradation IV
AKI39_RS08420	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS08450	PWY-6409	pyoverdine I biosynthesis
AKI39_RS08450	PWY-6562	norspermidine biosynthesis
AKI39_RS08450	PWY-761	rhizobactin 1021 biosynthesis
AKI39_RS08455	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AKI39_RS08455	PWY-6416	quinate degradation II
AKI39_RS08455	PWY-6707	gallate biosynthesis
AKI39_RS08550	PWY-6829	tRNA methylation (yeast)
AKI39_RS08550	PWY-7285	methylwyosine biosynthesis
AKI39_RS08550	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AKI39_RS08560	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AKI39_RS08560	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AKI39_RS08560	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS08560	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS08560	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AKI39_RS08560	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AKI39_RS08560	PWY-7205	CMP phosphorylation
AKI39_RS08560	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AKI39_RS08560	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS08560	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS08560	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS08560	PWY-7224	purine deoxyribonucleosides salvage
AKI39_RS08560	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS08560	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AKI39_RS08565	PWY-2201	folate transformations I
AKI39_RS08630	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS08730	PWY-6832	2-aminoethylphosphonate degradation II
AKI39_RS08745	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AKI39_RS08745	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AKI39_RS08775	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AKI39_RS08775	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AKI39_RS08775	PWY-7717	AKI39_RS08775
AKI39_RS08775	PWY-7733	AKI39_RS08775
AKI39_RS08775	PWY-7734	AKI39_RS08775
AKI39_RS08855	PWY-5686	UMP biosynthesis
AKI39_RS08905	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AKI39_RS08905	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AKI39_RS08905	PWY-6936	seleno-amino acid biosynthesis
AKI39_RS08905	PWY-702	L-methionine biosynthesis II
AKI39_RS08915	PWY-5392	reductive TCA cycle II
AKI39_RS08915	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS08915	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS08915	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS08915	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS08915	PWY-6728	methylaspartate cycle
AKI39_RS08915	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS08915	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS08920	PWY-5392	reductive TCA cycle II
AKI39_RS08920	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS08920	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS08920	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS08920	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS08920	PWY-6728	methylaspartate cycle
AKI39_RS08920	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS08920	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS08935	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AKI39_RS08935	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AKI39_RS08940	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AKI39_RS08940	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AKI39_RS09020	PWY-702	L-methionine biosynthesis II
AKI39_RS09070	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AKI39_RS09090	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AKI39_RS09095	PWY-2941	L-lysine biosynthesis II
AKI39_RS09095	PWY-2942	L-lysine biosynthesis III
AKI39_RS09095	PWY-5097	L-lysine biosynthesis VI
AKI39_RS09095	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS09095	PWY-6559	spermidine biosynthesis II
AKI39_RS09095	PWY-6562	norspermidine biosynthesis
AKI39_RS09095	PWY-7153	grixazone biosynthesis
AKI39_RS09095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS09265	PWY-381	nitrate reduction II (assimilatory)
AKI39_RS09265	PWY-5675	nitrate reduction V (assimilatory)
AKI39_RS09265	PWY-6549	L-glutamine biosynthesis III
AKI39_RS09265	PWY-6963	ammonia assimilation cycle I
AKI39_RS09265	PWY-6964	ammonia assimilation cycle II
AKI39_RS09405	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS09470	PWY-5367	petroselinate biosynthesis
AKI39_RS09470	PWY-5515	L-arabinose degradation II
AKI39_RS09470	PWY-5525	D-glucuronate degradation I
AKI39_RS09470	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AKI39_RS09470	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AKI39_RS09470	PWY-5989	stearate biosynthesis II (bacteria and plants)
AKI39_RS09470	PWY-5994	palmitate biosynthesis I (animals and fungi)
AKI39_RS09470	PWY-6113	superpathway of mycolate biosynthesis
AKI39_RS09470	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AKI39_RS09470	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AKI39_RS09470	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS09470	PWY-7663	gondoate biosynthesis (anaerobic)
AKI39_RS09470	PWY-7664	oleate biosynthesis IV (anaerobic)
AKI39_RS09470	PWYG-321	mycolate biosynthesis
AKI39_RS09550	PWY-6012	acyl carrier protein metabolism I
AKI39_RS09550	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AKI39_RS09980	PWY-4261	glycerol degradation I
AKI39_RS09980	PWY-6118	glycerol-3-phosphate shuttle
AKI39_RS09980	PWY-6952	glycerophosphodiester degradation
AKI39_RS09990	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS10005	PWY-6012	acyl carrier protein metabolism I
AKI39_RS10005	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AKI39_RS10010	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS10045	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS10045	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AKI39_RS10045	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS10045	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS10045	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AKI39_RS10045	PWY-6549	L-glutamine biosynthesis III
AKI39_RS10045	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AKI39_RS10045	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AKI39_RS10045	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS10380	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AKI39_RS10380	PWY-2201	folate transformations I
AKI39_RS10380	PWY-3841	folate transformations II
AKI39_RS10380	PWY-5030	L-histidine degradation III
AKI39_RS10380	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS10380	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AKI39_RS10395	PWY-6891	thiazole biosynthesis II (Bacillus)
AKI39_RS10395	PWY-6892	thiazole biosynthesis I (E. coli)
AKI39_RS10395	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS10405	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AKI39_RS10405	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AKI39_RS10435	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
AKI39_RS10440	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
AKI39_RS10440	PWY-5940	streptomycin biosynthesis
AKI39_RS10670	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS10735	PWY-2161	folate polyglutamylation
AKI39_RS10750	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AKI39_RS10750	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AKI39_RS10750	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AKI39_RS10750	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AKI39_RS10800	PWY-5667	CDP-diacylglycerol biosynthesis I
AKI39_RS10800	PWY-5981	CDP-diacylglycerol biosynthesis III
AKI39_RS10805	PWY-7294	xylose degradation IV
AKI39_RS10805	PWY-7295	L-arabinose degradation IV
AKI39_RS10805	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS10830	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AKI39_RS10830	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AKI39_RS10830	PWY-5989	stearate biosynthesis II (bacteria and plants)
AKI39_RS10830	PWY-5994	palmitate biosynthesis I (animals and fungi)
AKI39_RS10830	PWY-6113	superpathway of mycolate biosynthesis
AKI39_RS10830	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AKI39_RS10830	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AKI39_RS10830	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS10830	PWY-7663	gondoate biosynthesis (anaerobic)
AKI39_RS10830	PWY-7664	oleate biosynthesis IV (anaerobic)
AKI39_RS10830	PWYG-321	mycolate biosynthesis
AKI39_RS10840	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AKI39_RS10840	PWY-622	starch biosynthesis
AKI39_RS10860	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS10950	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AKI39_RS10950	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AKI39_RS11025	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AKI39_RS11025	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS11025	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AKI39_RS11025	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AKI39_RS11055	PWY-7701	AKI39_RS11055
AKI39_RS11120	PWY-4041	&gamma;-glutamyl cycle
AKI39_RS11120	PWY-5826	hypoglycin biosynthesis
AKI39_RS11300	PWY-723	alkylnitronates degradation
AKI39_RS11335	PWY-6938	NADH repair
AKI39_RS11405	PWY-4041	&gamma;-glutamyl cycle
AKI39_RS11405	PWY-5826	hypoglycin biosynthesis
AKI39_RS11530	PWY-5033	nicotinate degradation II
AKI39_RS11530	PWY-6993	nicotine degradation II (pyrrolidine pathway)
AKI39_RS11530	PWY-7128	nicotine degradation III (VPP pathway)
AKI39_RS11530	PWY-722	nicotinate degradation I
AKI39_RS11655	PWY-4983	L-citrulline-nitric oxide cycle
AKI39_RS11655	PWY-4984	urea cycle
AKI39_RS11655	PWY-5	canavanine biosynthesis
AKI39_RS11655	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS11655	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS11875	PWY-5392	reductive TCA cycle II
AKI39_RS11875	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AKI39_RS11875	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS11875	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS11875	PWY-6728	methylaspartate cycle
AKI39_RS11875	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS11875	PWY-7254	TCA cycle VII (acetate-producers)
AKI39_RS11875	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS12060	PWY-7533	gliotoxin biosynthesis
AKI39_RS12205	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS12205	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS12205	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS12205	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS12205	PWY-5723	Rubisco shunt
AKI39_RS12205	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS12205	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS12205	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS12205	PWY-7003	glycerol degradation to butanol
AKI39_RS12205	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS12205	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS12285	PWY-5647	2-nitrobenzoate degradation I
AKI39_RS12285	PWY-5652	2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA
AKI39_RS12285	PWY-5654	2-amino-3-carboxymuconate semialdehyde degradation to 2-oxopentenoate
AKI39_RS12355	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AKI39_RS12355	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AKI39_RS12355	PWY-7622	UDP-galactofuranose biosynthesis
AKI39_RS12560	PWY-6832	2-aminoethylphosphonate degradation II
AKI39_RS12665	PWY-5028	L-histidine degradation II
AKI39_RS12665	PWY-5030	L-histidine degradation III
AKI39_RS12735	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AKI39_RS12740	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS12740	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS12740	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS12740	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS12740	PWY-5723	Rubisco shunt
AKI39_RS12740	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS12740	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS12740	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS12740	PWY-7003	glycerol degradation to butanol
AKI39_RS12740	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS12740	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS12880	PWY-723	alkylnitronates degradation
AKI39_RS12995	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AKI39_RS12995	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AKI39_RS13010	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS13010	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS13010	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS13010	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS13010	PWY-5723	Rubisco shunt
AKI39_RS13010	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS13010	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS13010	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS13010	PWY-7003	glycerol degradation to butanol
AKI39_RS13010	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS13010	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS13045	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS13045	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS13045	PWY-6692	Fe(II) oxidation
AKI39_RS13045	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS13050	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS13050	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS13050	PWY-6692	Fe(II) oxidation
AKI39_RS13050	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS13095	PWY-5676	acetyl-CoA fermentation to butanoate II
AKI39_RS13095	PWY-5741	ethylmalonyl-CoA pathway
AKI39_RS13095	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AKI39_RS13115	PWY-5392	reductive TCA cycle II
AKI39_RS13115	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS13115	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS13115	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS13115	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS13115	PWY-6728	methylaspartate cycle
AKI39_RS13115	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS13115	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS13120	PWY-3162	L-tryptophan degradation V (side chain pathway)
AKI39_RS13120	PWY-5057	L-valine degradation II
AKI39_RS13120	PWY-5076	L-leucine degradation III
AKI39_RS13120	PWY-5078	L-isoleucine degradation II
AKI39_RS13120	PWY-5079	L-phenylalanine degradation III
AKI39_RS13120	PWY-5082	L-methionine degradation III
AKI39_RS13120	PWY-5480	pyruvate fermentation to ethanol I
AKI39_RS13120	PWY-5486	pyruvate fermentation to ethanol II
AKI39_RS13120	PWY-5751	phenylethanol biosynthesis
AKI39_RS13120	PWY-6313	serotonin degradation
AKI39_RS13120	PWY-6333	acetaldehyde biosynthesis I
AKI39_RS13120	PWY-6342	noradrenaline and adrenaline degradation
AKI39_RS13120	PWY-6587	pyruvate fermentation to ethanol III
AKI39_RS13120	PWY-6802	salidroside biosynthesis
AKI39_RS13120	PWY-6871	3-methylbutanol biosynthesis
AKI39_RS13120	PWY-7013	L-1,2-propanediol degradation
AKI39_RS13120	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS13120	PWY-7118	chitin degradation to ethanol
AKI39_RS13120	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AKI39_RS13260	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AKI39_RS13260	PWY-7494	choline degradation IV
AKI39_RS13265	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS13265	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS13265	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS13265	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS13265	PWY-5723	Rubisco shunt
AKI39_RS13265	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS13265	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS13265	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS13265	PWY-7003	glycerol degradation to butanol
AKI39_RS13265	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS13265	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS13280	PWY-4041	&gamma;-glutamyl cycle
AKI39_RS13280	PWY-5826	hypoglycin biosynthesis
AKI39_RS13305	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS13305	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS13305	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS13305	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS13305	PWY-5723	Rubisco shunt
AKI39_RS13305	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS13305	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS13305	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS13305	PWY-7003	glycerol degradation to butanol
AKI39_RS13305	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS13305	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS13320	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS13320	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS13320	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS13320	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS13320	PWY-5723	Rubisco shunt
AKI39_RS13320	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS13320	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS13320	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS13320	PWY-7003	glycerol degradation to butanol
AKI39_RS13320	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS13320	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS13360	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS13360	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS13360	PWY-6692	Fe(II) oxidation
AKI39_RS13360	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS13420	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AKI39_RS13450	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS13450	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS13450	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS13450	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS13450	PWY-5723	Rubisco shunt
AKI39_RS13450	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS13450	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS13450	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS13450	PWY-7003	glycerol degradation to butanol
AKI39_RS13450	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS13450	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS13500	PWY-5331	taurine biosynthesis
AKI39_RS13515	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS13515	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS13515	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS13515	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS13515	PWY-5723	Rubisco shunt
AKI39_RS13515	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS13515	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS13515	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS13515	PWY-7003	glycerol degradation to butanol
AKI39_RS13515	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS13515	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS13645	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AKI39_RS13645	PWY-7494	choline degradation IV
AKI39_RS13655	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AKI39_RS13660	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AKI39_RS13670	PWY-1281	sulfoacetaldehyde degradation I
AKI39_RS13670	PWY-6637	sulfolactate degradation II
AKI39_RS13720	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS13720	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS13720	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS13720	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS13755	PWY-723	alkylnitronates degradation
AKI39_RS13775	PWY-6617	adenosine nucleotides degradation III
AKI39_RS13840	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS13840	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS13840	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS13840	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS13840	PWY-5723	Rubisco shunt
AKI39_RS13840	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS13840	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS13840	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS13840	PWY-7003	glycerol degradation to butanol
AKI39_RS13840	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS13840	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS13900	PWY-381	nitrate reduction II (assimilatory)
AKI39_RS13900	PWY-5675	nitrate reduction V (assimilatory)
AKI39_RS13900	PWY-6549	L-glutamine biosynthesis III
AKI39_RS13900	PWY-6963	ammonia assimilation cycle I
AKI39_RS13900	PWY-6964	ammonia assimilation cycle II
AKI39_RS13910	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AKI39_RS13980	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS14040	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AKI39_RS14040	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS14040	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS14040	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AKI39_RS14040	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AKI39_RS14040	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AKI39_RS14055	PWY-3341	L-proline biosynthesis III
AKI39_RS14055	PWY-4981	L-proline biosynthesis II (from arginine)
AKI39_RS14055	PWY-6344	L-ornithine degradation II (Stickland reaction)
AKI39_RS14090	PWY-31	canavanine degradation
AKI39_RS14090	PWY-4984	urea cycle
AKI39_RS14090	PWY-6305	putrescine biosynthesis IV
AKI39_RS14090	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AKI39_RS14110	PWY-4202	arsenate detoxification I (glutaredoxin)
AKI39_RS14110	PWY-4621	arsenate detoxification II (glutaredoxin)
AKI39_RS14140	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS14155	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AKI39_RS14155	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AKI39_RS14155	PWY-7717	AKI39_RS14155
AKI39_RS14155	PWY-7733	AKI39_RS14155
AKI39_RS14155	PWY-7734	AKI39_RS14155
AKI39_RS14370	PWY-6891	thiazole biosynthesis II (Bacillus)
AKI39_RS14370	PWY-6892	thiazole biosynthesis I (E. coli)
AKI39_RS14370	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS14405	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AKI39_RS14405	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AKI39_RS14405	PWY-6148	tetrahydromethanopterin biosynthesis
AKI39_RS14435	PWY-4041	&gamma;-glutamyl cycle
AKI39_RS14435	PWY-5826	hypoglycin biosynthesis
AKI39_RS14445	PWY-7158	L-phenylalanine degradation V
AKI39_RS14460	PWY-4983	L-citrulline-nitric oxide cycle
AKI39_RS14460	PWY-4984	urea cycle
AKI39_RS14460	PWY-5	canavanine biosynthesis
AKI39_RS14460	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS14460	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS14495	PWY-5381	pyridine nucleotide cycling (plants)
AKI39_RS14495	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AKI39_RS14495	PWY-6596	adenosine nucleotides degradation I
AKI39_RS14495	PWY-6606	guanosine nucleotides degradation II
AKI39_RS14495	PWY-6607	guanosine nucleotides degradation I
AKI39_RS14495	PWY-6608	guanosine nucleotides degradation III
AKI39_RS14495	PWY-7185	UTP and CTP dephosphorylation I
AKI39_RS14505	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AKI39_RS14505	PWY-5368	dimorphecolate biosynthesis
AKI39_RS14505	PWY-5995	linoleate biosynthesis I (plants)
AKI39_RS14505	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AKI39_RS14505	PWY-6803	phosphatidylcholine acyl editing
AKI39_RS14505	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AKI39_RS14505	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AKI39_RS14505	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AKI39_RS14505	PWY-7470	phosphatidylcholine biosynthesis VII
AKI39_RS14505	PWY-7618	ricinoleate biosynthesis
AKI39_RS14515	PWY-6703	preQ<sub>0</sub> biosynthesis
AKI39_RS14570	PWY-5028	L-histidine degradation II
AKI39_RS14570	PWY-5030	L-histidine degradation III
AKI39_RS14580	PWY-5028	L-histidine degradation II
AKI39_RS14580	PWY-5030	L-histidine degradation III
AKI39_RS14710	PWY-622	starch biosynthesis
AKI39_RS14720	PWY-2622	trehalose biosynthesis IV
AKI39_RS14725	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AKI39_RS14725	PWY-622	starch biosynthesis
AKI39_RS14735	PWY-2661	trehalose biosynthesis V
AKI39_RS14735	PWY-6902	chitin degradation II
AKI39_RS14740	PWY-5941	glycogen degradation II (eukaryotic)
AKI39_RS14740	PWY-6724	starch degradation II
AKI39_RS14740	PWY-6737	starch degradation V
AKI39_RS14740	PWY-7238	sucrose biosynthesis II
AKI39_RS14745	PWY-2661	trehalose biosynthesis V
AKI39_RS14840	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AKI39_RS14840	PWY-7494	choline degradation IV
AKI39_RS14845	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AKI39_RS14865	PWY-1361	benzoyl-CoA degradation I (aerobic)
AKI39_RS14865	PWY-5109	2-methylbutanoate biosynthesis
AKI39_RS14865	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AKI39_RS14865	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AKI39_RS14865	PWY-5177	glutaryl-CoA degradation
AKI39_RS14865	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS14865	PWY-6435	4-hydroxybenzoate biosynthesis V
AKI39_RS14865	PWY-6583	pyruvate fermentation to butanol I
AKI39_RS14865	PWY-6863	pyruvate fermentation to hexanol
AKI39_RS14865	PWY-6883	pyruvate fermentation to butanol II
AKI39_RS14865	PWY-6944	androstenedione degradation
AKI39_RS14865	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AKI39_RS14865	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AKI39_RS14865	PWY-7007	methyl ketone biosynthesis
AKI39_RS14865	PWY-7046	4-coumarate degradation (anaerobic)
AKI39_RS14865	PWY-7094	fatty acid salvage
AKI39_RS14865	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AKI39_RS14865	PWY-735	jasmonic acid biosynthesis
AKI39_RS14865	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AKI39_RS14865	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AKI39_RS14865	PWY-7726	AKI39_RS14865
AKI39_RS14920	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS14920	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS14920	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS14920	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS14920	PWY-5723	Rubisco shunt
AKI39_RS14920	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS14920	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS14920	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS14920	PWY-7003	glycerol degradation to butanol
AKI39_RS14920	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS14920	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS15075	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS15075	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS15165	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AKI39_RS15165	PWY-581	indole-3-acetate biosynthesis II
AKI39_RS15165	PWY-7308	acrylonitrile degradation I
AKI39_RS15170	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AKI39_RS15170	PWY-581	indole-3-acetate biosynthesis II
AKI39_RS15170	PWY-7308	acrylonitrile degradation I
AKI39_RS15175	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AKI39_RS15175	PWY-581	indole-3-acetate biosynthesis II
AKI39_RS15175	PWY-7308	acrylonitrile degradation I
AKI39_RS15250	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS15255	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AKI39_RS15255	PWY-6596	adenosine nucleotides degradation I
AKI39_RS15255	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS15280	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AKI39_RS15280	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AKI39_RS15280	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AKI39_RS15390	PWY-6823	molybdenum cofactor biosynthesis
AKI39_RS15390	PWY-6891	thiazole biosynthesis II (Bacillus)
AKI39_RS15390	PWY-6892	thiazole biosynthesis I (E. coli)
AKI39_RS15390	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AKI39_RS15410	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS15410	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AKI39_RS15410	PWY-6638	sulfolactate degradation III
AKI39_RS15410	PWY-6642	(<i>R</i>)-cysteate degradation
AKI39_RS15410	PWY-6643	coenzyme M biosynthesis II
AKI39_RS15410	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AKI39_RS15410	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AKI39_RS15410	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS15495	PWY-6825	phosphatidylcholine biosynthesis V
AKI39_RS15500	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AKI39_RS15500	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AKI39_RS15505	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AKI39_RS15505	PWY-6167	flavin biosynthesis II (archaea)
AKI39_RS15505	PWY-6168	flavin biosynthesis III (fungi)
AKI39_RS15535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AKI39_RS15535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AKI39_RS15535	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AKI39_RS15535	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AKI39_RS15580	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AKI39_RS15580	PWY-6853	ethylene biosynthesis II (microbes)
AKI39_RS15580	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AKI39_RS15630	PWY-1361	benzoyl-CoA degradation I (aerobic)
AKI39_RS15630	PWY-2361	3-oxoadipate degradation
AKI39_RS15630	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AKI39_RS15640	PWY-6854	ethylene biosynthesis III (microbes)
AKI39_RS15670	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AKI39_RS15675	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS15740	PWY-4981	L-proline biosynthesis II (from arginine)
AKI39_RS15740	PWY-4984	urea cycle
AKI39_RS15740	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS15750	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS15760	PWY-4983	L-citrulline-nitric oxide cycle
AKI39_RS15760	PWY-4984	urea cycle
AKI39_RS15760	PWY-5	canavanine biosynthesis
AKI39_RS15760	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS15760	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS15920	PWY-7255	ergothioneine biosynthesis I (bacteria)
AKI39_RS15960	PWY-6123	inosine-5'-phosphate biosynthesis I
AKI39_RS15960	PWY-6124	inosine-5'-phosphate biosynthesis II
AKI39_RS15960	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS15960	PWY-7234	inosine-5'-phosphate biosynthesis III
AKI39_RS16015	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AKI39_RS16015	PWY-6164	3-dehydroquinate biosynthesis I
AKI39_RS16015	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AKI39_RS16045	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS16110	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AKI39_RS16110	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AKI39_RS16110	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AKI39_RS16115	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AKI39_RS16115	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AKI39_RS16120	PWY-5381	pyridine nucleotide cycling (plants)
AKI39_RS16120	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AKI39_RS16130	PWY-6825	phosphatidylcholine biosynthesis V
AKI39_RS16270	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS16285	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AKI39_RS16285	PWY-5723	Rubisco shunt
AKI39_RS16325	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AKI39_RS16325	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AKI39_RS16460	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS16530	PWY-7294	xylose degradation IV
AKI39_RS16530	PWY-7295	L-arabinose degradation IV
AKI39_RS16540	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AKI39_RS16590	PWY-5663	tetrahydrobiopterin biosynthesis I
AKI39_RS16590	PWY-5664	tetrahydrobiopterin biosynthesis II
AKI39_RS16590	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AKI39_RS16590	PWY-6703	preQ<sub>0</sub> biosynthesis
AKI39_RS16590	PWY-6983	tetrahydrobiopterin biosynthesis III
AKI39_RS16590	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AKI39_RS16595	PWY-6891	thiazole biosynthesis II (Bacillus)
AKI39_RS16595	PWY-6892	thiazole biosynthesis I (E. coli)
AKI39_RS16595	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS16665	PWY-5704	urea degradation II
AKI39_RS16675	PWY-5704	urea degradation II
AKI39_RS16680	PWY-5704	urea degradation II
AKI39_RS16865	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS16910	PWY-6486	D-galacturonate degradation II
AKI39_RS16910	PWY-6497	D-galactarate degradation II
AKI39_RS16910	PWY-6499	D-glucarate degradation II
AKI39_RS16910	PWY-6501	D-glucuronate degradation II
AKI39_RS16915	PWY-6497	D-galactarate degradation II
AKI39_RS16955	PWY-1341	phenylacetate degradation II (anaerobic)
AKI39_RS16955	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AKI39_RS16955	PWY-7716	AKI39_RS16955
AKI39_RS16995	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AKI39_RS17040	PWY-5278	sulfite oxidation III
AKI39_RS17040	PWY-5340	sulfate activation for sulfonation
AKI39_RS17040	PWY-6683	sulfate reduction III (assimilatory)
AKI39_RS17040	PWY-6932	selenate reduction
AKI39_RS17045	PWY-5278	sulfite oxidation III
AKI39_RS17045	PWY-5340	sulfate activation for sulfonation
AKI39_RS17045	PWY-6683	sulfate reduction III (assimilatory)
AKI39_RS17045	PWY-6932	selenate reduction
AKI39_RS17105	PWY-6936	seleno-amino acid biosynthesis
AKI39_RS17145	PWY-7205	CMP phosphorylation
AKI39_RS17150	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AKI39_RS17155	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AKI39_RS17165	PWY-3461	L-tyrosine biosynthesis II
AKI39_RS17165	PWY-3462	L-phenylalanine biosynthesis II
AKI39_RS17165	PWY-6120	L-tyrosine biosynthesis III
AKI39_RS17165	PWY-6627	salinosporamide A biosynthesis
AKI39_RS17165	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AKI39_RS17165	PWY-7626	bacilysin biosynthesis
AKI39_RS17185	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AKI39_RS17185	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AKI39_RS17185	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AKI39_RS17185	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AKI39_RS17185	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AKI39_RS17185	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AKI39_RS17185	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AKI39_RS17185	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AKI39_RS17185	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AKI39_RS17185	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AKI39_RS17190	PWY-181	photorespiration
AKI39_RS17215	PWY-5350	thiosulfate disproportionation III (rhodanese)
AKI39_RS17265	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AKI39_RS17265	PWY-6164	3-dehydroquinate biosynthesis I
AKI39_RS17265	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AKI39_RS17360	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS17360	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS17360	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS17360	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS17360	PWY-5723	Rubisco shunt
AKI39_RS17360	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS17360	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS17360	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS17360	PWY-7003	glycerol degradation to butanol
AKI39_RS17360	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS17360	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS17365	PWY-6531	mannitol cycle
AKI39_RS17380	PWY-7052	cyanophycin metabolism
AKI39_RS17385	PWY-7052	cyanophycin metabolism
AKI39_RS17435	PWY-5676	acetyl-CoA fermentation to butanoate II
AKI39_RS17435	PWY-5741	ethylmalonyl-CoA pathway
AKI39_RS17435	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AKI39_RS17490	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AKI39_RS17490	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AKI39_RS17495	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AKI39_RS17500	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AKI39_RS17505	PWY-1281	sulfoacetaldehyde degradation I
AKI39_RS17505	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AKI39_RS17505	PWY-5482	pyruvate fermentation to acetate II
AKI39_RS17505	PWY-5485	pyruvate fermentation to acetate IV
AKI39_RS17505	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS17505	PWY-6637	sulfolactate degradation II
AKI39_RS17505	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AKI39_RS17550	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS17550	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AKI39_RS17550	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AKI39_RS17550	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS17550	PWY-6728	methylaspartate cycle
AKI39_RS17550	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS17550	PWY-7254	TCA cycle VII (acetate-producers)
AKI39_RS17550	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS17555	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS17555	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AKI39_RS17555	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AKI39_RS17555	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS17555	PWY-6728	methylaspartate cycle
AKI39_RS17555	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS17555	PWY-7254	TCA cycle VII (acetate-producers)
AKI39_RS17555	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS17585	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS17585	PWY-5392	reductive TCA cycle II
AKI39_RS17585	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AKI39_RS17585	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS17585	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS17585	PWY-6728	methylaspartate cycle
AKI39_RS17585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS17585	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AKI39_RS17585	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS17725	PWY-5747	2-methylcitrate cycle II
AKI39_RS17885	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AKI39_RS17885	PWY-5368	dimorphecolate biosynthesis
AKI39_RS17885	PWY-5995	linoleate biosynthesis I (plants)
AKI39_RS17885	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AKI39_RS17885	PWY-6803	phosphatidylcholine acyl editing
AKI39_RS17885	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AKI39_RS17885	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AKI39_RS17885	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AKI39_RS17885	PWY-7470	phosphatidylcholine biosynthesis VII
AKI39_RS17885	PWY-7618	ricinoleate biosynthesis
AKI39_RS17910	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS17915	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS18025	PWY-4041	&gamma;-glutamyl cycle
AKI39_RS18025	PWY-5826	hypoglycin biosynthesis
AKI39_RS18100	PWY-5530	sorbitol biosynthesis II
AKI39_RS18100	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AKI39_RS18155	PWY-7294	xylose degradation IV
AKI39_RS18155	PWY-7295	L-arabinose degradation IV
AKI39_RS18315	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS18335	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS18335	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS18335	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS18335	PWY-7003	glycerol degradation to butanol
AKI39_RS18360	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS18360	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS18360	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS18360	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS18360	PWY-5723	Rubisco shunt
AKI39_RS18360	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS18360	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS18360	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS18360	PWY-7003	glycerol degradation to butanol
AKI39_RS18360	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS18360	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS18370	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AKI39_RS18490	PWY-5669	phosphatidylethanolamine biosynthesis I
AKI39_RS18495	PWY-5669	phosphatidylethanolamine biosynthesis I
AKI39_RS18500	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS18500	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS18505	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS18505	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS18505	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS18505	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AKI39_RS18505	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AKI39_RS18505	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AKI39_RS18505	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS18510	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS18510	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS18510	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS18510	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AKI39_RS18510	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AKI39_RS18510	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AKI39_RS18510	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS18630	PWY-3781	aerobic respiration I (cytochrome c)
AKI39_RS18630	PWY-4521	arsenite oxidation I (respiratory)
AKI39_RS18630	PWY-6692	Fe(II) oxidation
AKI39_RS18630	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AKI39_RS18630	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AKI39_RS18695	PWY-5482	pyruvate fermentation to acetate II
AKI39_RS18695	PWY-5485	pyruvate fermentation to acetate IV
AKI39_RS18695	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS18795	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AKI39_RS18805	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS18955	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS18955	PWY-6549	L-glutamine biosynthesis III
AKI39_RS18955	PWY-6728	methylaspartate cycle
AKI39_RS18955	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS18955	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS18955	PWY-7254	TCA cycle VII (acetate-producers)
AKI39_RS18955	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AKI39_RS19055	PWY-2941	L-lysine biosynthesis II
AKI39_RS19055	PWY-2942	L-lysine biosynthesis III
AKI39_RS19055	PWY-5097	L-lysine biosynthesis VI
AKI39_RS19180	PWY-7425	2-chloroacrylate degradation I
AKI39_RS19355	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS19470	PWY-5647	2-nitrobenzoate degradation I
AKI39_RS19470	PWY-5652	2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA
AKI39_RS19470	PWY-5654	2-amino-3-carboxymuconate semialdehyde degradation to 2-oxopentenoate
AKI39_RS19505	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS19505	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS19505	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS19505	PWY-5087	L-glutamate degradation VI (to pyruvate)
AKI39_RS19505	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS19505	PWY-5723	Rubisco shunt
AKI39_RS19505	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS19505	PWY-6728	methylaspartate cycle
AKI39_RS19505	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS19505	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS19505	PWY-7003	glycerol degradation to butanol
AKI39_RS19505	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS19505	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS19545	PWY-2301	<i>myo</i>-inositol biosynthesis
AKI39_RS19545	PWY-4702	phytate degradation I
AKI39_RS19545	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AKI39_RS19600	PWY-5331	taurine biosynthesis
AKI39_RS19640	PWY-2201	folate transformations I
AKI39_RS19640	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS19660	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AKI39_RS19660	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AKI39_RS19665	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AKI39_RS19665	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AKI39_RS19670	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AKI39_RS19670	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AKI39_RS19670	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AKI39_RS19670	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AKI39_RS19680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AKI39_RS19680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AKI39_RS19685	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AKI39_RS19685	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AKI39_RS19685	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AKI39_RS19690	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AKI39_RS19690	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AKI39_RS19705	PWY-2201	folate transformations I
AKI39_RS19735	PWY-5686	UMP biosynthesis
AKI39_RS19795	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS19795	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS19795	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS19795	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS19835	PWY-4041	&gamma;-glutamyl cycle
AKI39_RS19835	PWY-5826	hypoglycin biosynthesis
AKI39_RS20085	PWY-5392	reductive TCA cycle II
AKI39_RS20085	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS20085	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS20085	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS20085	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS20085	PWY-6728	methylaspartate cycle
AKI39_RS20085	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS20085	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS20095	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AKI39_RS20095	PWY-5723	Rubisco shunt
AKI39_RS20095	PWY-6891	thiazole biosynthesis II (Bacillus)
AKI39_RS20095	PWY-6892	thiazole biosynthesis I (E. coli)
AKI39_RS20095	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS20095	PWY-7560	methylerythritol phosphate pathway II
AKI39_RS20100	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AKI39_RS20100	PWY-3801	sucrose degradation II (sucrose synthase)
AKI39_RS20100	PWY-5054	sorbitol biosynthesis I
AKI39_RS20100	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AKI39_RS20100	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AKI39_RS20100	PWY-5659	GDP-mannose biosynthesis
AKI39_RS20100	PWY-5723	Rubisco shunt
AKI39_RS20100	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS20100	PWY-621	sucrose degradation III (sucrose invertase)
AKI39_RS20100	PWY-622	starch biosynthesis
AKI39_RS20100	PWY-6981	chitin biosynthesis
AKI39_RS20100	PWY-6992	1,5-anhydrofructose degradation
AKI39_RS20100	PWY-7238	sucrose biosynthesis II
AKI39_RS20100	PWY-7347	sucrose biosynthesis III
AKI39_RS20100	PWY-7385	1,3-propanediol biosynthesis (engineered)
AKI39_RS20110	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AKI39_RS20120	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AKI39_RS20120	PWY-6855	chitin degradation I (archaea)
AKI39_RS20120	PWY-6906	chitin derivatives degradation
AKI39_RS20135	PWY-1281	sulfoacetaldehyde degradation I
AKI39_RS20135	PWY-5482	pyruvate fermentation to acetate II
AKI39_RS20135	PWY-5485	pyruvate fermentation to acetate IV
AKI39_RS20135	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS20135	PWY-6637	sulfolactate degradation II
AKI39_RS20140	PWY-5482	pyruvate fermentation to acetate II
AKI39_RS20140	PWY-5485	pyruvate fermentation to acetate IV
AKI39_RS20140	PWY-5497	purine nucleobases degradation II (anaerobic)
AKI39_RS20145	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AKI39_RS20145	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AKI39_RS20145	PWY-5989	stearate biosynthesis II (bacteria and plants)
AKI39_RS20145	PWY-6113	superpathway of mycolate biosynthesis
AKI39_RS20145	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AKI39_RS20145	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AKI39_RS20145	PWY-7663	gondoate biosynthesis (anaerobic)
AKI39_RS20145	PWY-7664	oleate biosynthesis IV (anaerobic)
AKI39_RS20145	PWYG-321	mycolate biosynthesis
AKI39_RS20150	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS20150	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS20150	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS20150	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS20150	PWY-5723	Rubisco shunt
AKI39_RS20150	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS20150	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS20150	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS20150	PWY-7003	glycerol degradation to butanol
AKI39_RS20150	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS20150	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS20380	PWY-7731	AKI39_RS20380
AKI39_RS20385	PWY-6654	phosphopantothenate biosynthesis III
AKI39_RS20530	PWY-6854	ethylene biosynthesis III (microbes)
AKI39_RS20610	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS20625	PWY-5101	L-isoleucine biosynthesis II
AKI39_RS20625	PWY-5103	L-isoleucine biosynthesis III
AKI39_RS20625	PWY-5104	L-isoleucine biosynthesis IV
AKI39_RS20625	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AKI39_RS20745	PWY-7533	gliotoxin biosynthesis
AKI39_RS20820	PWY-4041	&gamma;-glutamyl cycle
AKI39_RS20820	PWY-5826	hypoglycin biosynthesis
AKI39_RS21015	PWY-6654	phosphopantothenate biosynthesis III
AKI39_RS21315	PWY-6123	inosine-5'-phosphate biosynthesis I
AKI39_RS21315	PWY-6124	inosine-5'-phosphate biosynthesis II
AKI39_RS21315	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS21315	PWY-7234	inosine-5'-phosphate biosynthesis III
AKI39_RS21320	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AKI39_RS21520	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS21520	PWY-5743	3-hydroxypropanoate cycle
AKI39_RS21520	PWY-5744	glyoxylate assimilation
AKI39_RS21520	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS21520	PWY-6679	jadomycin biosynthesis
AKI39_RS21520	PWY-6722	candicidin biosynthesis
AKI39_RS21520	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS21530	PWY-5392	reductive TCA cycle II
AKI39_RS21530	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS21530	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS21530	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS21530	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS21530	PWY-6728	methylaspartate cycle
AKI39_RS21530	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS21530	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS21590	PWY-1361	benzoyl-CoA degradation I (aerobic)
AKI39_RS21590	PWY-5109	2-methylbutanoate biosynthesis
AKI39_RS21590	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AKI39_RS21590	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AKI39_RS21590	PWY-5177	glutaryl-CoA degradation
AKI39_RS21590	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS21590	PWY-6435	4-hydroxybenzoate biosynthesis V
AKI39_RS21590	PWY-6583	pyruvate fermentation to butanol I
AKI39_RS21590	PWY-6863	pyruvate fermentation to hexanol
AKI39_RS21590	PWY-6883	pyruvate fermentation to butanol II
AKI39_RS21590	PWY-6944	androstenedione degradation
AKI39_RS21590	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AKI39_RS21590	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AKI39_RS21590	PWY-7007	methyl ketone biosynthesis
AKI39_RS21590	PWY-7046	4-coumarate degradation (anaerobic)
AKI39_RS21590	PWY-7094	fatty acid salvage
AKI39_RS21590	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AKI39_RS21590	PWY-735	jasmonic acid biosynthesis
AKI39_RS21590	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AKI39_RS21590	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AKI39_RS21590	PWY-7726	AKI39_RS21590
AKI39_RS21620	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS21620	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS21620	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS21620	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS21620	PWY-5723	Rubisco shunt
AKI39_RS21620	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS21620	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS21620	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS21620	PWY-7003	glycerol degradation to butanol
AKI39_RS21620	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS21620	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS21670	PWY-1042	glycolysis IV (plant cytosol)
AKI39_RS21670	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS21670	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AKI39_RS21670	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS21670	PWY-5723	Rubisco shunt
AKI39_RS21670	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AKI39_RS21670	PWY-6886	1-butanol autotrophic biosynthesis
AKI39_RS21670	PWY-6901	superpathway of glucose and xylose degradation
AKI39_RS21670	PWY-7003	glycerol degradation to butanol
AKI39_RS21670	PWY-7124	ethylene biosynthesis V (engineered)
AKI39_RS21670	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AKI39_RS21895	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS21905	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AKI39_RS21905	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AKI39_RS21905	PWY-6897	thiamin salvage II
AKI39_RS21905	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AKI39_RS21905	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AKI39_RS21905	PWY-7356	thiamin salvage IV (yeast)
AKI39_RS21905	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AKI39_RS21975	PWY-4261	glycerol degradation I
AKI39_RS22160	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AKI39_RS22170	PWY-5686	UMP biosynthesis
AKI39_RS22205	PWY-5344	L-homocysteine biosynthesis
AKI39_RS22220	PWY-6840	homoglutathione biosynthesis
AKI39_RS22220	PWY-7255	ergothioneine biosynthesis I (bacteria)
AKI39_RS22255	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AKI39_RS22310	PWY-5674	nitrate reduction IV (dissimilatory)
AKI39_RS22330	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AKI39_RS22360	PWY-5796	malonate decarboxylase activation
AKI39_RS22370	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS22370	PWY-5743	3-hydroxypropanoate cycle
AKI39_RS22370	PWY-5744	glyoxylate assimilation
AKI39_RS22370	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS22370	PWY-6679	jadomycin biosynthesis
AKI39_RS22370	PWY-6722	candicidin biosynthesis
AKI39_RS22370	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS22375	PWY-4381	fatty acid biosynthesis initiation I
AKI39_RS22375	PWY-5743	3-hydroxypropanoate cycle
AKI39_RS22375	PWY-5744	glyoxylate assimilation
AKI39_RS22375	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS22375	PWY-6060	malonate degradation II (biotin-dependent)
AKI39_RS22375	PWY-6679	jadomycin biosynthesis
AKI39_RS22375	PWY-6722	candicidin biosynthesis
AKI39_RS22375	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AKI39_RS22385	PWY-5794	malonate degradation I (biotin-independent)
AKI39_RS22385	PWY-6060	malonate degradation II (biotin-dependent)
AKI39_RS22390	PWY-2201	folate transformations I
AKI39_RS22390	PWY-3841	folate transformations II
AKI39_RS22405	PWY-6891	thiazole biosynthesis II (Bacillus)
AKI39_RS22405	PWY-6892	thiazole biosynthesis I (E. coli)
AKI39_RS22410	PWY-6910	hydroxymethylpyrimidine salvage
AKI39_RS22410	PWY-7356	thiamin salvage IV (yeast)
AKI39_RS22410	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AKI39_RS22445	PWY-5839	menaquinol-7 biosynthesis
AKI39_RS22445	PWY-5844	menaquinol-9 biosynthesis
AKI39_RS22445	PWY-5849	menaquinol-6 biosynthesis
AKI39_RS22445	PWY-5890	menaquinol-10 biosynthesis
AKI39_RS22445	PWY-5891	menaquinol-11 biosynthesis
AKI39_RS22445	PWY-5892	menaquinol-12 biosynthesis
AKI39_RS22445	PWY-5895	menaquinol-13 biosynthesis
AKI39_RS22540	PWY-6605	adenine and adenosine salvage II
AKI39_RS22540	PWY-6610	adenine and adenosine salvage IV
AKI39_RS22640	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AKI39_RS22640	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AKI39_RS22665	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS22675	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AKI39_RS22730	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AKI39_RS22730	PWY-6148	tetrahydromethanopterin biosynthesis
AKI39_RS22730	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AKI39_RS22730	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AKI39_RS22760	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AKI39_RS22920	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AKI39_RS22920	PWY-5723	Rubisco shunt
AKI39_RS22925	PWY-181	photorespiration
AKI39_RS22930	PWY-5958	acridone alkaloid biosynthesis
AKI39_RS22930	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AKI39_RS22930	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AKI39_RS22935	PWY-5958	acridone alkaloid biosynthesis
AKI39_RS22935	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AKI39_RS22935	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AKI39_RS22985	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AKI39_RS22985	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AKI39_RS23015	PWY-1622	formaldehyde assimilation I (serine pathway)
AKI39_RS23015	PWY-5484	glycolysis II (from fructose 6-phosphate)
AKI39_RS23035	PWY-5667	CDP-diacylglycerol biosynthesis I
AKI39_RS23035	PWY-5981	CDP-diacylglycerol biosynthesis III
AKI39_RS23050	PWY-6004	glycine betaine biosynthesis V (from glycine)
AKI39_RS23060	PWY-2201	folate transformations I
AKI39_RS23060	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AKI39_RS23065	PWY-6840	homoglutathione biosynthesis
AKI39_RS23065	PWY-7255	ergothioneine biosynthesis I (bacteria)
AKI39_RS23095	PWY-6825	phosphatidylcholine biosynthesis V
AKI39_RS23155	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AKI39_RS23155	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AKI39_RS23175	PWY-5074	mevalonate degradation
AKI39_RS23275	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AKI39_RS23295	PWY-5532	adenosine nucleotides degradation IV
AKI39_RS23295	PWY-5723	Rubisco shunt
AKI39_RS23325	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AKI39_RS23385	PWY-2201	folate transformations I
AKI39_RS23385	PWY-3841	folate transformations II
AKI39_RS23395	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AKI39_RS23415	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AKI39_RS23415	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AKI39_RS23430	PWY-2941	L-lysine biosynthesis II
AKI39_RS23430	PWY-5097	L-lysine biosynthesis VI
AKI39_RS23500	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AKI39_RS23500	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AKI39_RS23500	PWY-6268	adenosylcobalamin salvage from cobalamin
AKI39_RS23500	PWY-6269	adenosylcobalamin salvage from cobinamide II
AKI39_RS23510	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AKI39_RS23510	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AKI39_RS23515	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AKI39_RS23515	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AKI39_RS23530	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AKI39_RS23530	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AKI39_RS23575	PWY-3961	phosphopantothenate biosynthesis II
AKI39_RS23600	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AKI39_RS23620	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AKI39_RS23640	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AKI39_RS23700	PWY-3221	dTDP-L-rhamnose biosynthesis II
AKI39_RS23700	PWY-6808	dTDP-D-forosamine biosynthesis
AKI39_RS23700	PWY-6942	dTDP-D-desosamine biosynthesis
AKI39_RS23700	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AKI39_RS23700	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AKI39_RS23700	PWY-6974	dTDP-L-olivose biosynthesis
AKI39_RS23700	PWY-6976	dTDP-L-mycarose biosynthesis
AKI39_RS23700	PWY-7104	dTDP-L-megosamine biosynthesis
AKI39_RS23700	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AKI39_RS23700	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AKI39_RS23700	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AKI39_RS23700	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AKI39_RS23700	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AKI39_RS23700	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AKI39_RS23700	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AKI39_RS23700	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AKI39_RS23700	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AKI39_RS23700	PWY-7688	AKI39_RS23700
AKI39_RS23710	PWY-3221	dTDP-L-rhamnose biosynthesis II
AKI39_RS23710	PWY-6808	dTDP-D-forosamine biosynthesis
AKI39_RS23710	PWY-6942	dTDP-D-desosamine biosynthesis
AKI39_RS23710	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AKI39_RS23710	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AKI39_RS23710	PWY-6974	dTDP-L-olivose biosynthesis
AKI39_RS23710	PWY-6976	dTDP-L-mycarose biosynthesis
AKI39_RS23710	PWY-7104	dTDP-L-megosamine biosynthesis
AKI39_RS23710	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AKI39_RS23710	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AKI39_RS23710	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AKI39_RS23710	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AKI39_RS23710	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AKI39_RS23710	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AKI39_RS23710	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AKI39_RS23710	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AKI39_RS23710	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AKI39_RS23710	PWY-7688	AKI39_RS23710
AKI39_RS23720	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AKI39_RS23720	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AKI39_RS23720	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AKI39_RS23740	PWY-1361	benzoyl-CoA degradation I (aerobic)
AKI39_RS23740	PWY-5109	2-methylbutanoate biosynthesis
AKI39_RS23740	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AKI39_RS23740	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AKI39_RS23740	PWY-5177	glutaryl-CoA degradation
AKI39_RS23740	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AKI39_RS23740	PWY-6435	4-hydroxybenzoate biosynthesis V
AKI39_RS23740	PWY-6583	pyruvate fermentation to butanol I
AKI39_RS23740	PWY-6863	pyruvate fermentation to hexanol
AKI39_RS23740	PWY-6883	pyruvate fermentation to butanol II
AKI39_RS23740	PWY-6944	androstenedione degradation
AKI39_RS23740	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AKI39_RS23740	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AKI39_RS23740	PWY-7007	methyl ketone biosynthesis
AKI39_RS23740	PWY-7046	4-coumarate degradation (anaerobic)
AKI39_RS23740	PWY-7094	fatty acid salvage
AKI39_RS23740	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AKI39_RS23740	PWY-735	jasmonic acid biosynthesis
AKI39_RS23740	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AKI39_RS23740	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AKI39_RS23740	PWY-7726	AKI39_RS23740
AKI39_RS23850	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AKI39_RS23850	PWY-7494	choline degradation IV
AKI39_RS23855	PWY-2941	L-lysine biosynthesis II
AKI39_RS23855	PWY-2942	L-lysine biosynthesis III
AKI39_RS23855	PWY-5097	L-lysine biosynthesis VI
AKI39_RS23890	PWY-5392	reductive TCA cycle II
AKI39_RS23890	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS23890	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS23890	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS23890	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS23890	PWY-6728	methylaspartate cycle
AKI39_RS23890	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS23890	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS23895	PWY-5392	reductive TCA cycle II
AKI39_RS23895	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS23895	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS23895	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS23895	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS23895	PWY-6728	methylaspartate cycle
AKI39_RS23895	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS23895	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AKI39_RS23910	PWY-6654	phosphopantothenate biosynthesis III
AKI39_RS24210	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AKI39_RS24255	PWY-6164	3-dehydroquinate biosynthesis I
AKI39_RS24260	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AKI39_RS24275	PWY-2941	L-lysine biosynthesis II
AKI39_RS24275	PWY-2942	L-lysine biosynthesis III
AKI39_RS24275	PWY-5097	L-lysine biosynthesis VI
AKI39_RS24290	PWY-5674	nitrate reduction IV (dissimilatory)
AKI39_RS24300	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AKI39_RS24300	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AKI39_RS24620	PWY-381	nitrate reduction II (assimilatory)
AKI39_RS24620	PWY-5675	nitrate reduction V (assimilatory)
AKI39_RS24620	PWY-6549	L-glutamine biosynthesis III
AKI39_RS24620	PWY-6963	ammonia assimilation cycle I
AKI39_RS24620	PWY-6964	ammonia assimilation cycle II
AKI39_RS24750	PWY-5392	reductive TCA cycle II
AKI39_RS24750	PWY-5537	pyruvate fermentation to acetate V
AKI39_RS24750	PWY-5538	pyruvate fermentation to acetate VI
AKI39_RS24750	PWY-5690	TCA cycle II (plants and fungi)
AKI39_RS24750	PWY-5913	TCA cycle VI (obligate autotrophs)
AKI39_RS24750	PWY-6728	methylaspartate cycle
AKI39_RS24750	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AKI39_RS24750	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)