locus-tag class description BAFK78_RS00010 PF00933 Glycosyl hydrolase family 3 N terminal domain BAFK78_RS00025 PF00579 tRNA synthetases class I (W and Y) BAFK78_RS00030 PF01594 AI-2E family transporter BAFK78_RS00040 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAFK78_RS00045 PF07949 YbbR-like protein BAFK78_RS00050 PF01648 4'-phosphopantetheinyl transferase superfamily BAFK78_RS00055 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) BAFK78_RS00060 PF01416 tRNA pseudouridine synthase BAFK78_RS00070 PF00271 Helicase conserved C-terminal domain BAFK78_RS00070 PF17764 3′ DNA-binding domain (3′BD) BAFK78_RS00070 PF18074 Primosomal protein N C-terminal domain BAFK78_RS00070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAFK78_RS00070 PF04851 Type III restriction enzyme, res subunit BAFK78_RS00075 PF00485 Phosphoribulokinase / Uridine kinase family BAFK78_RS00085 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAFK78_RS00085 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAFK78_RS00090 PF00849 RNA pseudouridylate synthase BAFK78_RS00100 PF00365 Phosphofructokinase BAFK78_RS00105 PF02547 Queuosine biosynthesis protein BAFK78_RS00110 PF05491 RuvB C-terminal winged helix domain BAFK78_RS00110 PF17864 RuvB AAA lid domain BAFK78_RS00110 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAFK78_RS00115 PF01330 RuvA N terminal domain BAFK78_RS00120 PF07995 Glucose / Sorbosone dehydrogenase BAFK78_RS00125 PF01709 Transcriptional regulator BAFK78_RS00130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BAFK78_RS00130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BAFK78_RS00145 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BAFK78_RS00155 PF10502 Signal peptidase, peptidase S26 BAFK78_RS00160 PF03781 Sulfatase-modifying factor enzyme 1 BAFK78_RS00160 PF08308 PEGA domain BAFK78_RS00165 PF01668 SmpB protein BAFK78_RS00175 PF00521 DNA gyrase/topoisomerase IV, subunit A BAFK78_RS00180 PF00204 DNA gyrase B BAFK78_RS00180 PF00986 DNA gyrase B subunit, carboxyl terminus BAFK78_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFK78_RS00180 PF01751 Toprim domain BAFK78_RS00185 PF01553 Acyltransferase BAFK78_RS00200 PF01739 CheR methyltransferase, SAM binding domain BAFK78_RS00200 PF03705 CheR methyltransferase, all-alpha domain BAFK78_RS00205 PF01895 PhoU domain BAFK78_RS00220 PF02463 RecF/RecN/SMC N terminal domain BAFK78_RS00220 PF06470 SMC proteins Flexible Hinge Domain BAFK78_RS00225 PF01351 Ribonuclease HII BAFK78_RS00240 PF02592 Putative vitamin uptake transporter BAFK78_RS00250 PF00588 SpoU rRNA Methylase family BAFK78_RS00255 PF03167 Uracil DNA glycosylase superfamily BAFK78_RS00260 PF03840 Preprotein translocase SecG subunit BAFK78_RS00265 PF00121 Triosephosphate isomerase BAFK78_RS00270 PF00162 Phosphoglycerate kinase BAFK78_RS00275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAFK78_RS00275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAFK78_RS00285 PF00571 CBS domain BAFK78_RS00285 PF03471 Transporter associated domain BAFK78_RS00290 PF02130 Uncharacterized protein family UPF0054 BAFK78_RS00295 PF00085 Thioredoxin BAFK78_RS00300 PF04452 RNA methyltransferase BAFK78_RS00305 PF03793 PASTA domain BAFK78_RS00310 PF02911 Formyl transferase, C-terminal domain BAFK78_RS00310 PF00551 Formyl transferase BAFK78_RS00315 PF01327 Polypeptide deformylase BAFK78_RS00325 PF01321 Creatinase/Prolidase N-terminal domain BAFK78_RS00325 PF00557 Metallopeptidase family M24 BAFK78_RS00335 PF02073 Thermophilic metalloprotease (M29) BAFK78_RS00360 PF00472 RF-1 domain BAFK78_RS00360 PF03462 PCRF domain BAFK78_RS00370 PF00448 SRP54-type protein, GTPase domain BAFK78_RS00370 PF02881 SRP54-type protein, helical bundle domain BAFK78_RS00380 PF12704 MacB-like periplasmic core domain BAFK78_RS00380 PF02687 FtsX-like permease family BAFK78_RS00385 PF00005 ABC transporter BAFK78_RS00405 PF00266 Aminotransferase class-V BAFK78_RS00410 PF01592 NifU-like N terminal domain BAFK78_RS00415 PF01078 Magnesium chelatase, subunit ChlI BAFK78_RS00415 PF13335 Magnesium chelatase, subunit ChlI C-terminal BAFK78_RS00420 PF00056 lactate/malate dehydrogenase, NAD binding domain BAFK78_RS00420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAFK78_RS00425 PF00009 Elongation factor Tu GTP binding domain BAFK78_RS00425 PF03144 Elongation factor Tu domain 2 BAFK78_RS00425 PF06421 GTP-binding protein LepA C-terminus BAFK78_RS00425 PF00679 Elongation factor G C-terminus BAFK78_RS00425 PF14492 Elongation Factor G, domain II BAFK78_RS00445 PF01813 ATP synthase subunit D BAFK78_RS00450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAFK78_RS00450 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAFK78_RS00455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAFK78_RS00455 PF16886 ATPsynthase alpha/beta subunit N-term extension BAFK78_RS00455 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAFK78_RS00475 PF01713 Smr domain BAFK78_RS00475 PF00488 MutS domain V BAFK78_RS00480 PF03193 RsgA GTPase BAFK78_RS00485 PF01177 Asp/Glu/Hydantoin racemase BAFK78_RS00490 PF00152 tRNA synthetases class II (D, K and N) BAFK78_RS00490 PF01336 OB-fold nucleic acid binding domain BAFK78_RS00505 PF00595 PDZ domain BAFK78_RS00510 PF00557 Metallopeptidase family M24 BAFK78_RS00520 PF01029 NusB family BAFK78_RS00530 PF00108 Thiolase, N-terminal domain BAFK78_RS00530 PF02803 Thiolase, C-terminal domain BAFK78_RS00540 PF00772 DnaB-like helicase N terminal domain BAFK78_RS00540 PF03796 DnaB-like helicase C terminal domain BAFK78_RS00545 PF01281 Ribosomal protein L9, N-terminal domain BAFK78_RS00545 PF03948 Ribosomal protein L9, C-terminal domain BAFK78_RS00550 PF01084 Ribosomal protein S18 BAFK78_RS00555 PF00436 Single-strand binding protein family BAFK78_RS00560 PF01250 Ribosomal protein S6 BAFK78_RS00565 PF00367 phosphotransferase system, EIIB BAFK78_RS00565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAFK78_RS00565 PF02378 Phosphotransferase system, EIIC BAFK78_RS00570 PF03006 Haemolysin-III related BAFK78_RS00575 PF02163 Peptidase family M50 BAFK78_RS00575 PF17820 PDZ domain BAFK78_RS00585 PF01255 Putative undecaprenyl diphosphate synthase BAFK78_RS00590 PF01765 Ribosome recycling factor BAFK78_RS00595 PF00889 Elongation factor TS BAFK78_RS00600 PF00318 Ribosomal protein S2 BAFK78_RS00620 PF00575 S1 RNA binding domain BAFK78_RS00625 PF02224 Cytidylate kinase BAFK78_RS00630 PF01479 S4 domain BAFK78_RS00630 PF00849 RNA pseudouridylate synthase BAFK78_RS00640 PF00154 recA bacterial DNA recombination protein BAFK78_RS00645 PF03449 Transcription elongation factor, N-terminal BAFK78_RS00645 PF01272 Transcription elongation factor, GreA/GreB, C-term BAFK78_RS00660 PF03129 Anticodon binding domain BAFK78_RS00660 PF13393 Histidyl-tRNA synthetase BAFK78_RS00665 PF00905 Penicillin binding protein transpeptidase domain BAFK78_RS00665 PF03717 Penicillin-binding Protein dimerisation domain BAFK78_RS00665 PF03793 PASTA domain BAFK78_RS00670 PF00501 AMP-binding enzyme BAFK78_RS00680 PF00873 AcrB/AcrD/AcrF family BAFK78_RS00695 PF01809 Putative membrane protein insertion efficiency factor BAFK78_RS00700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAFK78_RS00705 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS00710 PF00005 ABC transporter BAFK78_RS00710 PF00571 CBS domain BAFK78_RS00715 PF00460 Flagella basal body rod protein BAFK78_RS00715 PF00669 Bacterial flagellin N-terminal helical region BAFK78_RS00715 PF00700 Bacterial flagellin C-terminal helical region BAFK78_RS00720 PF02465 Flagellar hook-associated protein 2 N-terminus BAFK78_RS00720 PF07195 Flagellar hook-associated protein 2 C-terminus BAFK78_RS00725 PF01979 Amidohydrolase family BAFK78_RS00730 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BAFK78_RS00735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAFK78_RS00735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAFK78_RS00740 PF01043 SecA preprotein cross-linking domain BAFK78_RS00740 PF07517 SecA DEAD-like domain BAFK78_RS00740 PF07516 SecA Wing and Scaffold domain BAFK78_RS00740 PF02810 SEC-C motif BAFK78_RS00770 PF01168 Alanine racemase, N-terminal domain BAFK78_RS00770 PF00842 Alanine racemase, C-terminal domain BAFK78_RS00785 PF01699 Sodium/calcium exchanger protein BAFK78_RS00795 PF02446 4-alpha-glucanotransferase BAFK78_RS00810 PF01176 Translation initiation factor 1A / IF-1 BAFK78_RS00830 PF00092 von Willebrand factor type A domain BAFK78_RS00845 PF17863 AAA lid domain BAFK78_RS00845 PF07726 ATPase family associated with various cellular activities (AAA) BAFK78_RS00850 PF02527 rRNA small subunit methyltransferase G BAFK78_RS00855 PF13932 GidA associated domain BAFK78_RS00855 PF01134 Glucose inhibited division protein A BAFK78_RS00860 PF01926 50S ribosome-binding GTPase BAFK78_RS00860 PF10396 GTP-binding protein TrmE N-terminus BAFK78_RS00860 PF12631 MnmE helical domain BAFK78_RS00870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFK78_RS00870 PF07196 Flagellin hook IN motif BAFK78_RS00875 PF00700 Bacterial flagellin C-terminal helical region BAFK78_RS00875 PF00669 Bacterial flagellin N-terminal helical region BAFK78_RS00880 PF02623 FliW protein BAFK78_RS00885 PF02599 Global regulator protein family BAFK78_RS00895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BAFK78_RS00905 PF00453 Ribosomal protein L20 BAFK78_RS00910 PF01632 Ribosomal protein L35 BAFK78_RS00915 PF05198 Translation initiation factor IF-3, N-terminal domain BAFK78_RS00915 PF00707 Translation initiation factor IF-3, C-terminal domain BAFK78_RS00930 PF01026 TatD related DNase BAFK78_RS00940 PF00472 RF-1 domain BAFK78_RS00940 PF03462 PCRF domain BAFK78_RS00945 PF05175 Methyltransferase small domain BAFK78_RS00950 PF04607 Region found in RelA / SpoT proteins BAFK78_RS00950 PF02824 TGS domain BAFK78_RS00960 PF07478 D-ala D-ala ligase C-terminus BAFK78_RS00960 PF01820 D-ala D-ala ligase N-terminus BAFK78_RS00965 PF02875 Mur ligase family, glutamate ligase domain BAFK78_RS00965 PF01225 Mur ligase family, catalytic domain BAFK78_RS00965 PF08245 Mur ligase middle domain BAFK78_RS00975 PF03471 Transporter associated domain BAFK78_RS00975 PF00571 CBS domain BAFK78_RS00975 PF01595 Cyclin M transmembrane N-terminal domain BAFK78_RS00980 PF01145 SPFH domain / Band 7 family BAFK78_RS00985 PF01145 SPFH domain / Band 7 family BAFK78_RS01010 PF00483 Nucleotidyl transferase BAFK78_RS01030 PF01119 DNA mismatch repair protein, C-terminal domain BAFK78_RS01030 PF08676 MutL C terminal dimerisation domain BAFK78_RS01050 PF08207 Elongation factor P (EF-P) KOW-like domain BAFK78_RS01050 PF01132 Elongation factor P (EF-P) OB domain BAFK78_RS01050 PF09285 Elongation factor P, C-terminal BAFK78_RS01055 PF12849 PBP superfamily domain BAFK78_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS01070 PF00005 ABC transporter BAFK78_RS01075 PF02535 ZIP Zinc transporter BAFK78_RS01080 PF01411 tRNA synthetases class II (A) BAFK78_RS01080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAFK78_RS01085 PF14842 FliG N-terminal domain BAFK78_RS01085 PF14841 FliG middle domain BAFK78_RS01085 PF01706 FliG C-terminal domain BAFK78_RS01090 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BAFK78_RS01095 PF01207 Dihydrouridine synthase (Dus) BAFK78_RS01100 PF02403 Seryl-tRNA synthetase N-terminal domain BAFK78_RS01100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAFK78_RS01110 PF05193 Peptidase M16 inactive domain BAFK78_RS01110 PF00675 Insulinase (Peptidase family M16) BAFK78_RS01110 PF08367 Peptidase M16C associated BAFK78_RS01115 PF01197 Ribosomal protein L31 BAFK78_RS01120 PF07497 Rho termination factor, RNA-binding domain BAFK78_RS01120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAFK78_RS01130 PF00216 Bacterial DNA-binding protein BAFK78_RS01135 PF01649 Ribosomal protein S20 BAFK78_RS01145 PF06071 Protein of unknown function (DUF933) BAFK78_RS01145 PF01926 50S ribosome-binding GTPase BAFK78_RS01155 PF00795 Carbon-nitrogen hydrolase BAFK78_RS01165 PF01712 Deoxynucleoside kinase BAFK78_RS01170 PF00230 Major intrinsic protein BAFK78_RS01175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAFK78_RS01175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAFK78_RS01185 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BAFK78_RS01185 PF01266 FAD dependent oxidoreductase BAFK78_RS01200 PF01551 Peptidase family M23 BAFK78_RS01205 PF01725 Ham1 family BAFK78_RS01210 PF08439 Oligopeptidase F BAFK78_RS01210 PF01432 Peptidase family M3 BAFK78_RS01220 PF09335 SNARE associated Golgi protein BAFK78_RS01230 PF00133 tRNA synthetases class I (I, L, M and V) BAFK78_RS01230 PF09334 tRNA synthetases class I (M) BAFK78_RS01230 PF13603 Leucyl-tRNA synthetase, Domain 2 BAFK78_RS01230 PF08264 Anticodon-binding domain of tRNA BAFK78_RS01240 PF05362 Lon protease (S16) C-terminal proteolytic domain BAFK78_RS01240 PF00004 ATPase family associated with various cellular activities (AAA) BAFK78_RS01240 PF02190 ATP-dependent protease La (LON) substrate-binding domain BAFK78_RS01245 PF01368 DHH family BAFK78_RS01245 PF02272 DHHA1 domain BAFK78_RS01245 PF17768 RecJ OB domain BAFK78_RS01250 PF01476 LysM domain BAFK78_RS01250 PF08525 Opacity-associated protein A N-terminal motif BAFK78_RS01250 PF01551 Peptidase family M23 BAFK78_RS01255 PF01165 Ribosomal protein S21 BAFK78_RS01260 PF17854 FtsK alpha domain BAFK78_RS01260 PF09397 Ftsk gamma domain BAFK78_RS01260 PF01580 FtsK/SpoIIIE family BAFK78_RS01265 PF02673 Bacitracin resistance protein BacA BAFK78_RS01270 PF14718 Soluble lytic murein transglycosylase L domain BAFK78_RS01270 PF01464 Transglycosylase SLT domain BAFK78_RS01285 PF08460 Bacterial SH3 domain BAFK78_RS01285 PF01551 Peptidase family M23 BAFK78_RS01290 PF10502 Signal peptidase, peptidase S26 BAFK78_RS01295 PF00012 Hsp70 protein BAFK78_RS01320 PF10609 NUBPL iron-transfer P-loop NTPase BAFK78_RS01325 PF00448 SRP54-type protein, GTPase domain BAFK78_RS01330 PF00771 FHIPEP family BAFK78_RS01335 PF01312 FlhB HrpN YscU SpaS Family BAFK78_RS01340 PF01311 Bacterial export proteins, family 1 BAFK78_RS01345 PF01313 Bacterial export proteins, family 3 BAFK78_RS01350 PF00813 FliP family BAFK78_RS01360 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAFK78_RS01365 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAFK78_RS01365 PF02154 Flagellar motor switch protein FliM BAFK78_RS01370 PF03748 Flagellar basal body-associated protein FliL BAFK78_RS01375 PF00691 OmpA family BAFK78_RS01375 PF13677 Membrane MotB of proton-channel complex MotA/MotB BAFK78_RS01380 PF01618 MotA/TolQ/ExbB proton channel family BAFK78_RS01385 PF06289 Flagellar and Swarming motility proteins BAFK78_RS01390 PF07559 Flagellar basal body protein FlaE BAFK78_RS01390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFK78_RS01390 PF00460 Flagella basal body rod protein BAFK78_RS01395 PF03963 Flagellar hook capping protein - N-terminal region BAFK78_RS01415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAFK78_RS01415 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAFK78_RS01415 PF18269 T3SS EscN ATPase C-terminal domain BAFK78_RS01420 PF02108 Flagellar assembly protein FliH BAFK78_RS01425 PF14842 FliG N-terminal domain BAFK78_RS01425 PF14841 FliG middle domain BAFK78_RS01425 PF01706 FliG C-terminal domain BAFK78_RS01430 PF08345 Flagellar M-ring protein C-terminal BAFK78_RS01430 PF01514 Secretory protein of YscJ/FliF family BAFK78_RS01435 PF02049 Flagellar hook-basal body complex protein FliE BAFK78_RS01440 PF00460 Flagella basal body rod protein BAFK78_RS01440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFK78_RS01445 PF00460 Flagella basal body rod protein BAFK78_RS01450 PF07724 AAA domain (Cdc48 subfamily) BAFK78_RS01455 PF00227 Proteasome subunit BAFK78_RS01460 PF02481 DNA recombination-mediator protein A BAFK78_RS01465 PF00515 Tetratricopeptide repeat BAFK78_RS01470 PF00091 Tubulin/FtsZ family, GTPase domain BAFK78_RS01470 PF12327 FtsZ family, C-terminal domain BAFK78_RS01475 PF02491 SHS2 domain inserted in FTSA BAFK78_RS01480 PF03799 Cell division protein FtsQ BAFK78_RS01480 PF08478 POTRA domain, FtsQ-type BAFK78_RS01485 PF01098 Cell cycle protein BAFK78_RS01490 PF00953 Glycosyl transferase family 4 BAFK78_RS01495 PF08245 Mur ligase middle domain BAFK78_RS01495 PF01225 Mur ligase family, catalytic domain BAFK78_RS01495 PF02875 Mur ligase family, glutamate ligase domain BAFK78_RS01505 PF01795 MraW methylase family BAFK78_RS01525 PF01513 ATP-NAD kinase BAFK78_RS01530 PF01584 CheW-like domain BAFK78_RS01535 PF01728 FtsJ-like methyltransferase BAFK78_RS01540 PF00348 Polyprenyl synthetase BAFK78_RS01560 PF00005 ABC transporter BAFK78_RS01605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAFK78_RS01610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAFK78_RS01615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAFK78_RS01620 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS01625 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS01625 PF12911 N-terminal TM domain of oligopeptide transport permease C BAFK78_RS01630 PF00005 ABC transporter BAFK78_RS01630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAFK78_RS01635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAFK78_RS01635 PF00005 ABC transporter BAFK78_RS01645 PF03952 Enolase, N-terminal domain BAFK78_RS01645 PF00113 Enolase, C-terminal TIM barrel domain BAFK78_RS01650 PF00380 Ribosomal protein S9/S16 BAFK78_RS01655 PF00572 Ribosomal protein L13 BAFK78_RS01665 PF02934 GatB/GatE catalytic domain BAFK78_RS01665 PF02637 GatB domain BAFK78_RS01670 PF01425 Amidase BAFK78_RS01680 PF13361 UvrD-like helicase C-terminal domain BAFK78_RS01680 PF00580 UvrD/REP helicase N-terminal domain BAFK78_RS01700 PF00224 Pyruvate kinase, barrel domain BAFK78_RS01700 PF02887 Pyruvate kinase, alpha/beta domain BAFK78_RS01710 PF00830 Ribosomal L28 family BAFK78_RS01745 PF04452 RNA methyltransferase BAFK78_RS01750 PF17820 PDZ domain BAFK78_RS01750 PF01471 Putative peptidoglycan binding domain BAFK78_RS01750 PF03572 Peptidase family S41 BAFK78_RS01755 PF10609 NUBPL iron-transfer P-loop NTPase BAFK78_RS01760 PF01790 Prolipoprotein diacylglyceryl transferase BAFK78_RS01765 PF00563 EAL domain BAFK78_RS01770 PF02142 MGS-like domain BAFK78_RS01780 PF02127 Aminopeptidase I zinc metalloprotease (M18) BAFK78_RS01785 PF00367 phosphotransferase system, EIIB BAFK78_RS01790 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BAFK78_RS01790 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BAFK78_RS01795 PF00004 ATPase family associated with various cellular activities (AAA) BAFK78_RS01795 PF17871 AAA lid domain BAFK78_RS01795 PF02861 Clp amino terminal domain, pathogenicity island component BAFK78_RS01795 PF10431 C-terminal, D2-small domain, of ClpB protein BAFK78_RS01795 PF07724 AAA domain (Cdc48 subfamily) BAFK78_RS01800 PF00579 tRNA synthetases class I (W and Y) BAFK78_RS01800 PF01479 S4 domain BAFK78_RS01805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAFK78_RS01805 PF03129 Anticodon binding domain BAFK78_RS01810 PF00749 tRNA synthetases class I (E and Q), catalytic domain BAFK78_RS01825 PF01048 Phosphorylase superfamily BAFK78_RS01830 PF02773 S-adenosylmethionine synthetase, C-terminal domain BAFK78_RS01830 PF00438 S-adenosylmethionine synthetase, N-terminal domain BAFK78_RS01830 PF02772 S-adenosylmethionine synthetase, central domain BAFK78_RS01835 PF02664 S-Ribosylhomocysteinase (LuxS) BAFK78_RS01845 PF01230 HIT domain BAFK78_RS01850 PF03448 MgtE intracellular N domain BAFK78_RS01850 PF01769 Divalent cation transporter BAFK78_RS01850 PF00571 CBS domain BAFK78_RS01855 PF01204 Trehalase BAFK78_RS01860 PF02608 ABC transporter substrate-binding protein PnrA-like BAFK78_RS01865 PF02608 ABC transporter substrate-binding protein PnrA-like BAFK78_RS01870 PF02608 ABC transporter substrate-binding protein PnrA-like BAFK78_RS01880 PF02608 ABC transporter substrate-binding protein PnrA-like BAFK78_RS01885 PF02608 ABC transporter substrate-binding protein PnrA-like BAFK78_RS01890 PF02608 ABC transporter substrate-binding protein PnrA-like BAFK78_RS01895 PF00177 Ribosomal protein S7p/S5e BAFK78_RS01900 PF00164 Ribosomal protein S12/S23 BAFK78_RS01905 PF04983 RNA polymerase Rpb1, domain 3 BAFK78_RS01905 PF04997 RNA polymerase Rpb1, domain 1 BAFK78_RS01905 PF00623 RNA polymerase Rpb1, domain 2 BAFK78_RS01905 PF05000 RNA polymerase Rpb1, domain 4 BAFK78_RS01905 PF04998 RNA polymerase Rpb1, domain 5 BAFK78_RS01910 PF04560 RNA polymerase Rpb2, domain 7 BAFK78_RS01910 PF04563 RNA polymerase beta subunit BAFK78_RS01910 PF04561 RNA polymerase Rpb2, domain 2 BAFK78_RS01910 PF04565 RNA polymerase Rpb2, domain 3 BAFK78_RS01910 PF10385 RNA polymerase beta subunit external 1 domain BAFK78_RS01910 PF00562 RNA polymerase Rpb2, domain 6 BAFK78_RS01915 PF16320 Ribosomal protein L7/L12 dimerisation domain BAFK78_RS01915 PF00542 Ribosomal protein L7/L12 C-terminal domain BAFK78_RS01920 PF00466 Ribosomal protein L10 BAFK78_RS01925 PF00687 Ribosomal protein L1p/L10e family BAFK78_RS01930 PF00298 Ribosomal protein L11, RNA binding domain BAFK78_RS01930 PF03946 Ribosomal protein L11, N-terminal domain BAFK78_RS01935 PF02357 Transcription termination factor nusG BAFK78_RS01940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BAFK78_RS01950 PF00471 Ribosomal protein L33 BAFK78_RS01970 PF12796 Ankyrin repeats (3 copies) BAFK78_RS01985 PF09180 Prolyl-tRNA synthetase, C-terminal BAFK78_RS01985 PF03129 Anticodon binding domain BAFK78_RS01985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAFK78_RS02010 PF01238 Phosphomannose isomerase type I BAFK78_RS02015 PF02378 Phosphotransferase system, EIIC BAFK78_RS02015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAFK78_RS02015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAFK78_RS02040 PF01739 CheR methyltransferase, SAM binding domain BAFK78_RS02040 PF03705 CheR methyltransferase, all-alpha domain BAFK78_RS02045 PF00072 Response regulator receiver domain BAFK78_RS02045 PF01339 CheB methylesterase BAFK78_RS02055 PF05191 Adenylate kinase, active site lid BAFK78_RS02065 PF00072 Response regulator receiver domain BAFK78_RS02070 PF00672 HAMP domain BAFK78_RS02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFK78_RS02070 PF00512 His Kinase A (phospho-acceptor) domain BAFK78_RS02070 PF00072 Response regulator receiver domain BAFK78_RS02070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BAFK78_RS02070 PF01627 Hpt domain BAFK78_RS02100 PF02245 Methylpurine-DNA glycosylase (MPG) BAFK78_RS02130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAFK78_RS02145 PF01205 Uncharacterized protein family UPF0029 BAFK78_RS02145 PF09186 Domain of unknown function (DUF1949) BAFK78_RS02150 PF13614 AAA domain BAFK78_RS02160 PF02195 ParB-like nuclease domain BAFK78_RS02160 PF17762 HTH domain found in ParB protein BAFK78_RS02165 PF03989 DNA gyrase C-terminal domain, beta-propeller BAFK78_RS02165 PF00521 DNA gyrase/topoisomerase IV, subunit A BAFK78_RS02170 PF00204 DNA gyrase B BAFK78_RS02170 PF01751 Toprim domain BAFK78_RS02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFK78_RS02170 PF00986 DNA gyrase B subunit, carboxyl terminus BAFK78_RS02175 PF08299 Bacterial dnaA protein helix-turn-helix BAFK78_RS02175 PF00308 Bacterial dnaA protein BAFK78_RS02175 PF11638 DnaA N-terminal domain BAFK78_RS02180 PF02768 DNA polymerase III beta subunit, C-terminal domain BAFK78_RS02180 PF02767 DNA polymerase III beta subunit, central domain BAFK78_RS02180 PF00712 DNA polymerase III beta subunit, N-terminal domain BAFK78_RS02190 PF00468 Ribosomal protein L34 BAFK78_RS02195 PF00825 Ribonuclease P BAFK78_RS02200 PF02096 60Kd inner membrane protein BAFK78_RS02210 PF01370 NAD dependent epimerase/dehydratase family BAFK78_RS02215 PF01116 Fructose-bisphosphate aldolase class-II BAFK78_RS02220 PF01336 OB-fold nucleic acid binding domain BAFK78_RS02220 PF00152 tRNA synthetases class II (D, K and N) BAFK78_RS02220 PF02938 GAD domain BAFK78_RS02225 PF00999 Sodium/hydrogen exchanger family BAFK78_RS02240 PF00309 Sigma-54 factor, Activator interacting domain (AID) BAFK78_RS02240 PF04963 Sigma-54 factor, core binding domain BAFK78_RS02240 PF04552 Sigma-54, DNA binding domain BAFK78_RS02245 PF02417 Chromate transporter BAFK78_RS02255 PF05552 Conserved TM helix BAFK78_RS02255 PF00924 Mechanosensitive ion channel BAFK78_RS02260 PF00534 Glycosyl transferases group 1 BAFK78_RS02260 PF13439 Glycosyltransferase Family 4 BAFK78_RS02275 PF08459 UvrC Helix-hairpin-helix N-terminal BAFK78_RS02275 PF01541 GIY-YIG catalytic domain BAFK78_RS02315 PF12169 DNA polymerase III subunits gamma and tau domain III BAFK78_RS02320 PF02575 YbaB/EbfC DNA-binding family BAFK78_RS02325 PF00334 Nucleoside diphosphate kinase BAFK78_RS02340 PF12399 Branched-chain amino acid ATP-binding cassette transporter BAFK78_RS02340 PF00005 ABC transporter BAFK78_RS02345 PF02578 Multi-copper polyphenol oxidoreductase laccase BAFK78_RS02350 PF01784 NIF3 (NGG1p interacting factor 3) BAFK78_RS02355 PF01252 Signal peptidase (SPase) II BAFK78_RS02370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAFK78_RS02375 PF01554 MatE BAFK78_RS02385 PF03144 Elongation factor Tu domain 2 BAFK78_RS02385 PF03143 Elongation factor Tu C-terminal domain BAFK78_RS02385 PF00009 Elongation factor Tu GTP binding domain BAFK78_RS02390 PF00338 Ribosomal protein S10p/S20e BAFK78_RS02395 PF00297 Ribosomal protein L3 BAFK78_RS02400 PF00573 Ribosomal protein L4/L1 family BAFK78_RS02405 PF00276 Ribosomal protein L23 BAFK78_RS02410 PF03947 Ribosomal Proteins L2, C-terminal domain BAFK78_RS02410 PF00181 Ribosomal Proteins L2, RNA binding domain BAFK78_RS02415 PF00203 Ribosomal protein S19 BAFK78_RS02420 PF00237 Ribosomal protein L22p/L17e BAFK78_RS02425 PF00189 Ribosomal protein S3, C-terminal domain BAFK78_RS02425 PF07650 KH domain BAFK78_RS02430 PF00252 Ribosomal protein L16p/L10e BAFK78_RS02435 PF00831 Ribosomal L29 protein BAFK78_RS02440 PF00366 Ribosomal protein S17 BAFK78_RS02445 PF00238 Ribosomal protein L14p/L23e BAFK78_RS02450 PF00467 KOW motif BAFK78_RS02450 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BAFK78_RS02455 PF00673 ribosomal L5P family C-terminus BAFK78_RS02455 PF00281 Ribosomal protein L5 BAFK78_RS02460 PF00410 Ribosomal protein S8 BAFK78_RS02465 PF00347 Ribosomal protein L6 BAFK78_RS02470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BAFK78_RS02475 PF00333 Ribosomal protein S5, N-terminal domain BAFK78_RS02475 PF03719 Ribosomal protein S5, C-terminal domain BAFK78_RS02480 PF00327 Ribosomal protein L30p/L7e BAFK78_RS02485 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BAFK78_RS02490 PF00344 SecY translocase BAFK78_RS02495 PF00444 Ribosomal protein L36 BAFK78_RS02500 PF00416 Ribosomal protein S13/S18 BAFK78_RS02505 PF00411 Ribosomal protein S11 BAFK78_RS02510 PF01000 RNA polymerase Rpb3/RpoA insert domain BAFK78_RS02510 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BAFK78_RS02510 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BAFK78_RS02515 PF01196 Ribosomal protein L17 BAFK78_RS02520 PF01966 HD domain BAFK78_RS02520 PF12072 Domain of unknown function (DUF3552) BAFK78_RS02520 PF00013 KH domain BAFK78_RS02525 PF13277 YmdB-like protein BAFK78_RS02530 PF01479 S4 domain BAFK78_RS02530 PF01728 FtsJ-like methyltransferase BAFK78_RS02540 PF01926 50S ribosome-binding GTPase BAFK78_RS02540 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BAFK78_RS02550 PF13419 Haloacid dehalogenase-like hydrolase BAFK78_RS02560 PF01409 tRNA synthetases class II core domain (F) BAFK78_RS02565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BAFK78_RS02565 PF18262 Phe-tRNA synthetase beta subunit B1 domain BAFK78_RS02565 PF03484 tRNA synthetase B5 domain BAFK78_RS02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAFK78_RS02575 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAFK78_RS02575 PF00588 SpoU rRNA Methylase family BAFK78_RS02580 PF00684 DnaJ central domain BAFK78_RS02580 PF01556 DnaJ C terminal domain BAFK78_RS02580 PF00226 DnaJ domain BAFK78_RS02585 PF00012 Hsp70 protein BAFK78_RS02590 PF01025 GrpE BAFK78_RS02595 PF00795 Carbon-nitrogen hydrolase BAFK78_RS02595 PF02540 NAD synthase BAFK78_RS02620 PF03309 Type III pantothenate kinase BAFK78_RS02625 PF00248 Aldo/keto reductase family BAFK78_RS02635 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BAFK78_RS02645 PF12706 Beta-lactamase superfamily domain BAFK78_RS02645 PF03099 Biotin/lipoate A/B protein ligase family BAFK78_RS02650 PF03372 Endonuclease/Exonuclease/phosphatase family BAFK78_RS02660 PF00675 Insulinase (Peptidase family M16) BAFK78_RS02660 PF05193 Peptidase M16 inactive domain BAFK78_RS02685 PF01027 Inhibitor of apoptosis-promoting Bax1 BAFK78_RS02690 PF00679 Elongation factor G C-terminus BAFK78_RS02690 PF14492 Elongation Factor G, domain II BAFK78_RS02690 PF03144 Elongation factor Tu domain 2 BAFK78_RS02690 PF03764 Elongation factor G, domain IV BAFK78_RS02690 PF00009 Elongation factor Tu GTP binding domain BAFK78_RS02710 PF14572 Phosphoribosyl synthetase-associated domain BAFK78_RS02710 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BAFK78_RS02725 PF01121 Dephospho-CoA kinase BAFK78_RS02730 PF01367 5'-3' exonuclease, C-terminal SAM fold BAFK78_RS02730 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAFK78_RS02730 PF00476 DNA polymerase family A BAFK78_RS02730 PF01612 3'-5' exonuclease BAFK78_RS02745 PF00072 Response regulator receiver domain BAFK78_RS02750 PF03120 NAD-dependent DNA ligase OB-fold domain BAFK78_RS02750 PF00533 BRCA1 C Terminus (BRCT) domain BAFK78_RS02750 PF01653 NAD-dependent DNA ligase adenylation domain BAFK78_RS02775 PF00381 PTS HPr component phosphorylation site BAFK78_RS02780 PF05524 PEP-utilising enzyme, N-terminal BAFK78_RS02780 PF02896 PEP-utilising enzyme, TIM barrel domain BAFK78_RS02780 PF00391 PEP-utilising enzyme, mobile domain BAFK78_RS02785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAFK78_RS02790 PF00183 Hsp90 protein BAFK78_RS02795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAFK78_RS02795 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BAFK78_RS02815 PF01584 CheW-like domain BAFK78_RS02825 PF01627 Hpt domain BAFK78_RS02825 PF07194 P2 response regulator binding domain BAFK78_RS02825 PF02895 Signal transducing histidine kinase, homodimeric domain BAFK78_RS02825 PF01584 CheW-like domain BAFK78_RS02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFK78_RS02830 PF01339 CheB methylesterase BAFK78_RS02840 PF00486 Transcriptional regulatory protein, C terminal BAFK78_RS02840 PF00072 Response regulator receiver domain BAFK78_RS02850 PF00696 Amino acid kinase family BAFK78_RS02855 PF00535 Glycosyl transferase family 2 BAFK78_RS02860 PF00005 ABC transporter BAFK78_RS02870 PF06418 CTP synthase N-terminus BAFK78_RS02870 PF00117 Glutamine amidotransferase class-I BAFK78_RS02885 PF00672 HAMP domain BAFK78_RS02885 PF12729 Four helix bundle sensory module for signal transduction BAFK78_RS02885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFK78_RS02890 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAFK78_RS02890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAFK78_RS02890 PF01336 OB-fold nucleic acid binding domain BAFK78_RS02890 PF02811 PHP domain BAFK78_RS02890 PF14579 Helix-hairpin-helix motif BAFK78_RS02900 PF00270 DEAD/DEAH box helicase BAFK78_RS02900 PF00271 Helicase conserved C-terminal domain BAFK78_RS02900 PF17191 RecG wedge domain BAFK78_RS02920 PF08245 Mur ligase middle domain BAFK78_RS02925 PF02388 FemAB family BAFK78_RS02930 PF01588 Putative tRNA binding domain BAFK78_RS02930 PF09334 tRNA synthetases class I (M) BAFK78_RS02930 PF08264 Anticodon-binding domain of tRNA BAFK78_RS02935 PF01048 Phosphorylase superfamily BAFK78_RS02940 PF01515 Phosphate acetyl/butaryl transferase BAFK78_RS02945 PF00398 Ribosomal RNA adenine dimethylase BAFK78_RS02960 PF00501 AMP-binding enzyme BAFK78_RS02965 PF03485 Arginyl tRNA synthetase N terminal domain BAFK78_RS02965 PF05746 DALR anticodon binding domain BAFK78_RS02965 PF00750 tRNA synthetases class I (R) BAFK78_RS02975 PF02743 Cache domain BAFK78_RS02975 PF00672 HAMP domain BAFK78_RS02975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFK78_RS02980 PF05227 CHASE3 domain BAFK78_RS02980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFK78_RS02980 PF00672 HAMP domain BAFK78_RS02985 PF01565 FAD binding domain BAFK78_RS02985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BAFK78_RS02990 PF01406 tRNA synthetases class I (C) catalytic domain BAFK78_RS03000 PF00464 Serine hydroxymethyltransferase BAFK78_RS03005 PF00684 DnaJ central domain BAFK78_RS03005 PF01556 DnaJ C terminal domain BAFK78_RS03005 PF00226 DnaJ domain BAFK78_RS03015 PF02652 L-lactate permease BAFK78_RS03020 PF00768 D-alanyl-D-alanine carboxypeptidase BAFK78_RS03020 PF07943 Penicillin-binding protein 5, C-terminal domain BAFK78_RS03025 PF03975 CheD chemotactic sensory transduction BAFK78_RS03030 PF00580 UvrD/REP helicase N-terminal domain BAFK78_RS03030 PF13361 UvrD-like helicase C-terminal domain BAFK78_RS03035 PF01546 Peptidase family M20/M25/M40 BAFK78_RS03035 PF07687 Peptidase dimerisation domain BAFK78_RS03060 PF05697 Bacterial trigger factor protein (TF) BAFK78_RS03060 PF05698 Bacterial trigger factor protein (TF) C-terminus BAFK78_RS03065 PF00574 Clp protease BAFK78_RS03070 PF06689 ClpX C4-type zinc finger BAFK78_RS03070 PF07724 AAA domain (Cdc48 subfamily) BAFK78_RS03070 PF10431 C-terminal, D2-small domain, of ClpB protein BAFK78_RS03075 PF02190 ATP-dependent protease La (LON) substrate-binding domain BAFK78_RS03075 PF00004 ATPase family associated with various cellular activities (AAA) BAFK78_RS03075 PF05362 Lon protease (S16) C-terminal proteolytic domain BAFK78_RS03080 PF01479 S4 domain BAFK78_RS03080 PF00163 Ribosomal protein S4/S9 N-terminal domain BAFK78_RS03100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAFK78_RS03110 PF00933 Glycosyl hydrolase family 3 N terminal domain BAFK78_RS03125 PF00871 Acetokinase family BAFK78_RS03130 PF03461 TRCF domain BAFK78_RS03130 PF17757 UvrB interaction domain BAFK78_RS03130 PF02559 CarD-like/TRCF domain BAFK78_RS03130 PF00270 DEAD/DEAH box helicase BAFK78_RS03130 PF00271 Helicase conserved C-terminal domain BAFK78_RS03140 PF01520 N-acetylmuramoyl-L-alanine amidase BAFK78_RS03140 PF08239 Bacterial SH3 domain BAFK78_RS03155 PF02127 Aminopeptidase I zinc metalloprotease (M18) BAFK78_RS03165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAFK78_RS03165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAFK78_RS03170 PF00294 pfkB family carbohydrate kinase BAFK78_RS03185 PF13538 UvrD-like helicase C-terminal domain BAFK78_RS03190 PF13361 UvrD-like helicase C-terminal domain BAFK78_RS03190 PF00580 UvrD/REP helicase N-terminal domain BAFK78_RS03190 PF12705 PD-(D/E)XK nuclease superfamily BAFK78_RS03200 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BAFK78_RS03200 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BAFK78_RS03200 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BAFK78_RS03205 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BAFK78_RS03205 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BAFK78_RS03225 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS03230 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS03235 PF08402 TOBE domain BAFK78_RS03235 PF00005 ABC transporter BAFK78_RS03240 PF01926 50S ribosome-binding GTPase BAFK78_RS03245 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BAFK78_RS03250 PF02378 Phosphotransferase system, EIIC BAFK78_RS03250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAFK78_RS03250 PF00367 phosphotransferase system, EIIB BAFK78_RS03270 PF00118 TCP-1/cpn60 chaperonin family BAFK78_RS03280 PF02699 Preprotein translocase subunit BAFK78_RS03285 PF02355 Protein export membrane protein BAFK78_RS03290 PF02355 Protein export membrane protein BAFK78_RS03300 PF01556 DnaJ C terminal domain BAFK78_RS03300 PF00226 DnaJ domain BAFK78_RS03310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BAFK78_RS03315 PF00300 Histidine phosphatase superfamily (branch 1) BAFK78_RS03320 PF01921 tRNA synthetases class I (K) BAFK78_RS03325 PF07650 KH domain BAFK78_RS03325 PF01926 50S ribosome-binding GTPase BAFK78_RS03355 PF01520 N-acetylmuramoyl-L-alanine amidase BAFK78_RS03365 PF04620 Flagellar filament outer layer protein Flaa BAFK78_RS03370 PF02895 Signal transducing histidine kinase, homodimeric domain BAFK78_RS03370 PF07194 P2 response regulator binding domain BAFK78_RS03370 PF01627 Hpt domain BAFK78_RS03370 PF01584 CheW-like domain BAFK78_RS03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFK78_RS03375 PF01584 CheW-like domain BAFK78_RS03385 PF00072 Response regulator receiver domain BAFK78_RS03405 PF13419 Haloacid dehalogenase-like hydrolase BAFK78_RS03410 PF00005 ABC transporter BAFK78_RS03415 PF02653 Branched-chain amino acid transport system / permease component BAFK78_RS03420 PF02653 Branched-chain amino acid transport system / permease component BAFK78_RS03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFK78_RS03425 PF00672 HAMP domain BAFK78_RS03425 PF02203 Tar ligand binding domain homologue BAFK78_RS03430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFK78_RS03430 PF00672 HAMP domain BAFK78_RS03430 PF02203 Tar ligand binding domain homologue BAFK78_RS03440 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BAFK78_RS03440 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BAFK78_RS03445 PF01070 FMN-dependent dehydrogenase BAFK78_RS03450 PF00368 Hydroxymethylglutaryl-coenzyme A reductase BAFK78_RS03475 PF00188 Cysteine-rich secretory protein family BAFK78_RS03480 PF00210 Ferritin-like domain BAFK78_RS03485 PF00679 Elongation factor G C-terminus BAFK78_RS03485 PF03764 Elongation factor G, domain IV BAFK78_RS03485 PF00009 Elongation factor Tu GTP binding domain BAFK78_RS03485 PF03144 Elongation factor Tu domain 2 BAFK78_RS03485 PF14492 Elongation Factor G, domain II BAFK78_RS03495 PF02881 SRP54-type protein, helical bundle domain BAFK78_RS03495 PF00448 SRP54-type protein, GTPase domain BAFK78_RS03495 PF02978 Signal peptide binding domain BAFK78_RS03500 PF00886 Ribosomal protein S16 BAFK78_RS03510 PF01782 RimM N-terminal domain BAFK78_RS03510 PF05239 PRC-barrel domain BAFK78_RS03515 PF01746 tRNA (Guanine-1)-methyltransferase BAFK78_RS03520 PF01245 Ribosomal protein L19 BAFK78_RS03530 PF01467 Cytidylyltransferase-like BAFK78_RS03535 PF01783 Ribosomal L32p protein family BAFK78_RS03540 PF00550 Phosphopantetheine attachment site BAFK78_RS03545 PF14622 Ribonuclease-III-like BAFK78_RS03545 PF00035 Double-stranded RNA binding motif BAFK78_RS03550 PF01743 Poly A polymerase head domain BAFK78_RS03550 PF12627 Probable RNA and SrmB- binding site of polymerase A BAFK78_RS03550 PF13735 tRNA nucleotidyltransferase domain 2 putative BAFK78_RS03575 PF02618 YceG-like family BAFK78_RS03580 PF01807 CHC2 zinc finger BAFK78_RS03580 PF08275 DNA primase catalytic core, N-terminal domain BAFK78_RS03580 PF13662 Toprim domain BAFK78_RS03580 PF10410 DnaB-helicase binding domain of primase BAFK78_RS03585 PF04542 Sigma-70 region 2 BAFK78_RS03585 PF00140 Sigma-70 factor, region 1.2 BAFK78_RS03585 PF04539 Sigma-70 region 3 BAFK78_RS03585 PF04545 Sigma-70, region 4 BAFK78_RS03585 PF03979 Sigma-70 factor, region 1.1 BAFK78_RS03615 PF00905 Penicillin binding protein transpeptidase domain BAFK78_RS03615 PF03717 Penicillin-binding Protein dimerisation domain BAFK78_RS03615 PF03793 PASTA domain BAFK78_RS03620 PF01098 Cell cycle protein BAFK78_RS03625 PF03129 Anticodon binding domain BAFK78_RS03625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAFK78_RS03625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAFK78_RS03630 PF01066 CDP-alcohol phosphatidyltransferase BAFK78_RS03645 PF02386 Cation transport protein BAFK78_RS03655 PF02374 Anion-transporting ATPase BAFK78_RS03655 PF17886 HSP20-like domain found in ArsA BAFK78_RS03660 PF00365 Phosphofructokinase BAFK78_RS03665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAFK78_RS03665 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAFK78_RS03670 PF00375 Sodium:dicarboxylate symporter family BAFK78_RS03675 PF00342 Phosphoglucose isomerase BAFK78_RS03680 PF02195 ParB-like nuclease domain BAFK78_RS03680 PF17762 HTH domain found in ParB protein BAFK78_RS03685 PF00912 Transglycosylase BAFK78_RS03685 PF17092 Penicillin-binding protein OB-like domain BAFK78_RS03685 PF00905 Penicillin binding protein transpeptidase domain BAFK78_RS03695 PF03481 Putative GTP-binding controlling metal-binding BAFK78_RS03695 PF01300 Telomere recombination BAFK78_RS03700 PF03330 Lytic transglycolase BAFK78_RS03700 PF05036 Sporulation related domain BAFK78_RS03705 PF01207 Dihydrouridine synthase (Dus) BAFK78_RS03710 PF08264 Anticodon-binding domain of tRNA BAFK78_RS03710 PF00133 tRNA synthetases class I (I, L, M and V) BAFK78_RS03710 PF10458 Valyl tRNA synthetase tRNA binding arm BAFK78_RS03720 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BAFK78_RS03720 PF01266 FAD dependent oxidoreductase BAFK78_RS03725 PF00166 Chaperonin 10 Kd subunit BAFK78_RS03730 PF00005 ABC transporter BAFK78_RS03730 PF12848 ABC transporter BAFK78_RS03755 PF00730 HhH-GPD superfamily base excision DNA repair protein BAFK78_RS03755 PF00633 Helix-hairpin-helix motif BAFK78_RS03760 PF12911 N-terminal TM domain of oligopeptide transport permease C BAFK78_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component BAFK78_RS03785 PF09822 ABC-type uncharacterized transport system BAFK78_RS03795 PF00005 ABC transporter BAFK78_RS03800 PF12706 Beta-lactamase superfamily domain BAFK78_RS03800 PF00753 Metallo-beta-lactamase superfamily BAFK78_RS03805 PF01266 FAD dependent oxidoreductase BAFK78_RS03810 PF00574 Clp protease BAFK78_RS03835 PF01551 Peptidase family M23 BAFK78_RS03840 PF00072 Response regulator receiver domain BAFK78_RS03840 PF02954 Bacterial regulatory protein, Fis family BAFK78_RS03840 PF00158 Sigma-54 interaction domain BAFK78_RS03845 PF00989 PAS fold BAFK78_RS03845 PF13188 PAS domain BAFK78_RS03845 PF13426 PAS domain BAFK78_RS03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFK78_RS03845 PF00512 His Kinase A (phospho-acceptor) domain BAFK78_RS03850 PF09115 DNA polymerase III, delta subunit, C terminal BAFK78_RS03860 PF04101 Glycosyltransferase family 28 C-terminal domain BAFK78_RS03860 PF03033 Glycosyltransferase family 28 N-terminal domain BAFK78_RS03870 PF00814 Glycoprotease family BAFK78_RS03880 PF04545 Sigma-70, region 4 BAFK78_RS03880 PF04539 Sigma-70 region 3 BAFK78_RS03880 PF03979 Sigma-70 factor, region 1.1 BAFK78_RS03880 PF04542 Sigma-70 region 2 BAFK78_RS03880 PF00140 Sigma-70 factor, region 1.2 BAFK78_RS03890 PF02119 Flagellar P-ring protein BAFK78_RS03900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFK78_RS03900 PF00460 Flagella basal body rod protein BAFK78_RS03905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFK78_RS03905 PF00460 Flagella basal body rod protein BAFK78_RS03915 PF00156 Phosphoribosyl transferase domain BAFK78_RS03920 PF00829 Ribosomal prokaryotic L21 protein BAFK78_RS03930 PF01016 Ribosomal L27 protein BAFK78_RS03935 PF01018 GTP1/OBG BAFK78_RS03935 PF01926 50S ribosome-binding GTPase BAFK78_RS03940 PF01467 Cytidylyltransferase-like BAFK78_RS03955 PF04026 SpoVG BAFK78_RS03965 PF14693 Ribosomal protein TL5, C-terminal domain BAFK78_RS03965 PF01386 Ribosomal L25p family BAFK78_RS03970 PF01195 Peptidyl-tRNA hydrolase BAFK78_RS03975 PF01171 PP-loop family BAFK78_RS03980 PF00004 ATPase family associated with various cellular activities (AAA) BAFK78_RS03980 PF17862 AAA+ lid domain BAFK78_RS03980 PF06480 FtsH Extracellular BAFK78_RS03980 PF01434 Peptidase family M41 BAFK78_RS04000 PF02223 Thymidylate kinase BAFK78_RS04010 PF07244 Surface antigen variable number repeat BAFK78_RS04010 PF01103 Surface antigen BAFK78_RS04020 PF01624 MutS domain I BAFK78_RS04020 PF00488 MutS domain V BAFK78_RS04020 PF05190 MutS family domain IV BAFK78_RS04020 PF05192 MutS domain III BAFK78_RS04020 PF05188 MutS domain II BAFK78_RS04025 PF00156 Phosphoribosyl transferase domain BAFK78_RS04030 PF02576 RimP N-terminal domain BAFK78_RS04035 PF00575 S1 RNA binding domain BAFK78_RS04035 PF13184 NusA-like KH domain BAFK78_RS04035 PF08529 NusA N-terminal domain BAFK78_RS04040 PF11987 Translation-initiation factor 2 BAFK78_RS04040 PF00009 Elongation factor Tu GTP binding domain BAFK78_RS04040 PF04760 Translation initiation factor IF-2, N-terminal region BAFK78_RS04045 PF02033 Ribosome-binding factor A BAFK78_RS04050 PF01509 TruB family pseudouridylate synthase (N terminal domain) BAFK78_RS04055 PF00312 Ribosomal protein S15 BAFK78_RS04060 PF00575 S1 RNA binding domain BAFK78_RS04060 PF03725 3' exoribonuclease family, domain 2 BAFK78_RS04060 PF01138 3' exoribonuclease family, domain 1 BAFK78_RS04060 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BAFK78_RS04060 PF00013 KH domain BAFK78_RS04080 PF01702 Queuine tRNA-ribosyltransferase BAFK78_RS04085 PF03023 Lipid II flippase MurJ BAFK78_RS04095 PF04127 DNA / pantothenate metabolism flavoprotein BAFK78_RS04095 PF02441 Flavoprotein BAFK78_RS04100 PF00474 Sodium:solute symporter family BAFK78_RS04105 PF00849 RNA pseudouridylate synthase BAFK78_RS04115 PF08245 Mur ligase middle domain BAFK78_RS04115 PF01225 Mur ligase family, catalytic domain BAFK78_RS04115 PF02875 Mur ligase family, glutamate ligase domain BAFK78_RS04120 PF03755 YicC-like family, N-terminal region BAFK78_RS04120 PF08340 Domain of unknown function (DUF1732) BAFK78_RS04160 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BAFK78_RS04160 PF04408 Helicase associated domain (HA2) BAFK78_RS04160 PF00270 DEAD/DEAH box helicase BAFK78_RS04160 PF00271 Helicase conserved C-terminal domain BAFK78_RS04165 PF01131 DNA topoisomerase BAFK78_RS04165 PF01751 Toprim domain BAFK78_RS04165 PF13368 Topoisomerase C-terminal repeat BAFK78_RS04170 PF00149 Calcineurin-like phosphoesterase BAFK78_RS04175 PF13476 AAA domain BAFK78_RS04180 PF00480 ROK family BAFK78_RS04190 PF08264 Anticodon-binding domain of tRNA BAFK78_RS04190 PF00133 tRNA synthetases class I (I, L, M and V) BAFK78_RS04195 PF10431 C-terminal, D2-small domain, of ClpB protein BAFK78_RS04195 PF02861 Clp amino terminal domain, pathogenicity island component BAFK78_RS04195 PF17871 AAA lid domain BAFK78_RS04195 PF07724 AAA domain (Cdc48 subfamily) BAFK78_RS04195 PF00004 ATPase family associated with various cellular activities (AAA) BAFK78_RS04200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAFK78_RS04200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAFK78_RS04200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAFK78_RS04200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAFK78_RS04205 PF12344 Ultra-violet resistance protein B BAFK78_RS04205 PF04851 Type III restriction enzyme, res subunit BAFK78_RS04205 PF02151 UvrB/uvrC motif BAFK78_RS04205 PF00271 Helicase conserved C-terminal domain BAFK78_RS04205 PF17757 UvrB interaction domain BAFK78_RS04210 PF00005 ABC transporter BAFK78_RS04210 PF17760 UvrA interaction domain BAFK78_RS04210 PF17755 UvrA DNA-binding domain BAFK78_RS04240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BAFK78_RS04240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BAFK78_RS04245 PF03606 C4-dicarboxylate anaerobic carrier BAFK78_RS04365 PF00365 Phosphofructokinase BAFK78_RS04390 PF07995 Glucose / Sorbosone dehydrogenase BAFK78_RS04395 PF07995 Glucose / Sorbosone dehydrogenase BAFK78_RS04425 PF03781 Sulfatase-modifying factor enzyme 1 BAFK78_RS04425 PF08308 PEGA domain BAFK78_RS04520 PF06470 SMC proteins Flexible Hinge Domain BAFK78_RS04520 PF02463 RecF/RecN/SMC N terminal domain BAFK78_RS04645 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAFK78_RS04750 PF00579 tRNA synthetases class I (W and Y) BAFK78_RS04785 PF18074 Primosomal protein N C-terminal domain BAFK78_RS04785 PF17764 3′ DNA-binding domain (3′BD) BAFK78_RS04785 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAFK78_RS04785 PF00271 Helicase conserved C-terminal domain BAFK78_RS04785 PF04851 Type III restriction enzyme, res subunit BAFK78_RS05045 PF17764 3′ DNA-binding domain (3′BD) BAFK78_RS05045 PF18074 Primosomal protein N C-terminal domain BAFK78_RS05045 PF00271 Helicase conserved C-terminal domain BAFK78_RS05045 PF04851 Type III restriction enzyme, res subunit BAFK78_RS05045 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAFK78_RS05070 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAFK78_RS05070 PF17864 RuvB AAA lid domain BAFK78_RS05070 PF05491 RuvB C-terminal winged helix domain BAFK78_RS05165 PF01416 tRNA pseudouridine synthase BAFK78_RS05235 PF01416 tRNA pseudouridine synthase BAFK78_RS05265 PF02547 Queuosine biosynthesis protein BAFK78_RS05280 PF01709 Transcriptional regulator BAFK78_RS05390 PF00365 Phosphofructokinase BAFK78_RS05425 PF00933 Glycosyl hydrolase family 3 N terminal domain BAFK78_RS05470 PF18074 Primosomal protein N C-terminal domain BAFK78_RS05470 PF04851 Type III restriction enzyme, res subunit BAFK78_RS05470 PF00271 Helicase conserved C-terminal domain BAFK78_RS05470 PF17764 3′ DNA-binding domain (3′BD) BAFK78_RS05470 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAFK78_RS05675 PF04851 Type III restriction enzyme, res subunit BAFK78_RS05675 PF00271 Helicase conserved C-terminal domain BAFK78_RS05675 PF17764 3′ DNA-binding domain (3′BD) BAFK78_RS05675 PF18074 Primosomal protein N C-terminal domain BAFK78_RS05675 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAFK78_RS05705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAFK78_RS05705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAFK78_RS05885 PF17764 3′ DNA-binding domain (3′BD) BAFK78_RS05885 PF18074 Primosomal protein N C-terminal domain BAFK78_RS05885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAFK78_RS05885 PF04851 Type III restriction enzyme, res subunit BAFK78_RS05885 PF00271 Helicase conserved C-terminal domain BAFK78_RS06090 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAFK78_RS06090 PF00271 Helicase conserved C-terminal domain BAFK78_RS06090 PF18074 Primosomal protein N C-terminal domain BAFK78_RS06090 PF17764 3′ DNA-binding domain (3′BD) BAFK78_RS06090 PF04851 Type III restriction enzyme, res subunit BAFK78_RS06120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAFK78_RS06120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAFK78_RS06330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAFK78_RS06330 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284