BAFK78_RS00070	SM00487	DEAD-like helicases superfamily
BAFK78_RS00070	SM00490	helicase superfamily c-terminal domain
BAFK78_RS00080	SM00450	Rhodanese Homology Domain
BAFK78_RS00110	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS00115	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BAFK78_RS00175	SM00434	DNA Topoisomerase IV
BAFK78_RS00180	SM00387	Histidine kinase-like ATPases
BAFK78_RS00180	SM00433	TopoisomeraseII
BAFK78_RS00185	SM00563	Phosphate acyltransferases
BAFK78_RS00200	SM00138	Methyltransferase, chemotaxis proteins 
BAFK78_RS00230	SM00712	DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria.
BAFK78_RS00255	SM00986	Uracil DNA glycosylase superfamily
BAFK78_RS00255	SM00987	UreE urease accessory protein, C-terminal domain 
BAFK78_RS00275	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BAFK78_RS00280	SM00028	Tetratricopeptide repeats
BAFK78_RS00285	SM01091	Transporter associated domain
BAFK78_RS00305	SM00740	BAFK78_RS00305
BAFK78_RS00360	SM00937	BAFK78_RS00360
BAFK78_RS00370	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS00370	SM00962	SRP54-type protein, GTPase domain
BAFK78_RS00385	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS00415	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS00425	SM00838	Elongation factor G C-terminus
BAFK78_RS00475	SM00463	Small MutS-related domain
BAFK78_RS00475	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BAFK78_RS00475	SM00534	ATPase domain of DNA mismatch repair MUTS family
BAFK78_RS00505	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BAFK78_RS00515	SM00028	Tetratricopeptide repeats
BAFK78_RS00575	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BAFK78_RS00620	SM00316	Ribosomal protein S1-like RNA-binding domain
BAFK78_RS00630	SM00363	S4 RNA-binding domain
BAFK78_RS00640	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS00655	SM00028	Tetratricopeptide repeats
BAFK78_RS00695	SM01234	BAFK78_RS00695
BAFK78_RS00710	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS00740	SM00957	SecA DEAD-like domain
BAFK78_RS00740	SM00958	SecA preprotein cross-linking domain
BAFK78_RS00770	SM01005	Alanine racemase, C-terminal domain
BAFK78_RS00810	SM00316	Ribosomal protein S1-like RNA-binding domain
BAFK78_RS00815	SM00287	Bacterial SH3 domain homologues
BAFK78_RS00820	SM00028	Tetratricopeptide repeats
BAFK78_RS00825	SM00327	von Willebrand factor (vWF) type A domain
BAFK78_RS00830	SM00327	von Willebrand factor (vWF) type A domain
BAFK78_RS00840	SM00327	von Willebrand factor (vWF) type A domain
BAFK78_RS00855	SM01228	BAFK78_RS00855
BAFK78_RS00935	SM00028	Tetratricopeptide repeats
BAFK78_RS00940	SM00937	BAFK78_RS00940
BAFK78_RS00950	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BAFK78_RS00950	SM00954	Region found in RelA / SpoT proteins
BAFK78_RS00975	SM00116	Domain in cystathionine beta-synthase and other proteins.
BAFK78_RS00975	SM01091	Transporter associated domain
BAFK78_RS00980	SM00244	prohibitin homologues
BAFK78_RS00985	SM00244	prohibitin homologues
BAFK78_RS01020	SM00028	Tetratricopeptide repeats
BAFK78_RS01025	SM00028	Tetratricopeptide repeats
BAFK78_RS01025	SM00671	Sel1-like repeats.
BAFK78_RS01030	SM00853	MutL C terminal dimerisation domain
BAFK78_RS01030	SM01340	BAFK78_RS01030
BAFK78_RS01050	SM00841	Elongation factor P, C-terminal
BAFK78_RS01050	SM01185	BAFK78_RS01050
BAFK78_RS01070	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01080	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BAFK78_RS01110	SM01264	BAFK78_RS01110
BAFK78_RS01120	SM00357	Cold shock protein domain
BAFK78_RS01120	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01130	SM00411	bacterial (prokaryotic) histone like domain
BAFK78_RS01240	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01240	SM00464	Found in ATP-dependent protease La (LON)
BAFK78_RS01260	SM00843	BAFK78_RS01260
BAFK78_RS01280	SM00028	Tetratricopeptide repeats
BAFK78_RS01285	SM00257	Lysin motif
BAFK78_RS01310	SM01245	BAFK78_RS01310
BAFK78_RS01325	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01325	SM00962	SRP54-type protein, GTPase domain
BAFK78_RS01415	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01450	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01450	SM01086	C-terminal, D2-small domain, of ClpB protein
BAFK78_RS01465	SM00028	Tetratricopeptide repeats
BAFK78_RS01470	SM00864	Tubulin/FtsZ family, GTPase domain
BAFK78_RS01470	SM00865	Tubulin/FtsZ family, C-terminal domain
BAFK78_RS01475	SM00842	Cell division protein FtsA
BAFK78_RS01530	SM00260	Two component signalling adaptor domain
BAFK78_RS01595	SM00028	Tetratricopeptide repeats
BAFK78_RS01600	SM00563	Phosphate acyltransferases
BAFK78_RS01630	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01635	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01645	SM01192	BAFK78_RS01645
BAFK78_RS01645	SM01193	BAFK78_RS01645
BAFK78_RS01665	SM00845	GatB domain
BAFK78_RS01735	SM01058	CarD-like/TRCF domain
BAFK78_RS01750	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BAFK78_RS01750	SM00245	tail specific protease
BAFK78_RS01765	SM00052	Putative diguanylate phosphodiesterase
BAFK78_RS01770	SM00851	MGS-like domain
BAFK78_RS01795	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS01800	SM00363	S4 RNA-binding domain
BAFK78_RS01820	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BAFK78_RS01850	SM00924	MgtE intracellular N domain
BAFK78_RS01905	SM00663	RNA polymerase I subunit A N-terminus
BAFK78_RS01930	SM00649	Ribosomal protein L11/L12
BAFK78_RS01935	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BAFK78_RS01935	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BAFK78_RS01970	SM00248	ankyrin repeats
BAFK78_RS01985	SM00946	Prolyl-tRNA synthetase, C-terminal
BAFK78_RS02025	SM00477	DNA/RNA non-specific endonuclease
BAFK78_RS02025	SM00892	DNA/RNA non-specific endonuclease
BAFK78_RS02040	SM00138	Methyltransferase, chemotaxis proteins 
BAFK78_RS02065	SM00267	diguanylate cyclase
BAFK78_RS02065	SM00448	cheY-homologous receiver domain
BAFK78_RS02070	SM00387	Histidine kinase-like ATPases
BAFK78_RS02070	SM00388	His Kinase A (phosphoacceptor) domain
BAFK78_RS02070	SM00448	cheY-homologous receiver domain
BAFK78_RS02160	SM00470	ParB-like nuclease domain
BAFK78_RS02165	SM00434	DNA Topoisomerase IV
BAFK78_RS02170	SM00387	Histidine kinase-like ATPases
BAFK78_RS02170	SM00433	TopoisomeraseII
BAFK78_RS02175	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS02175	SM00760	Bacterial dnaA protein helix-turn-helix domain
BAFK78_RS02180	SM00480	DNA polymerase III beta subunit
BAFK78_RS02205	SM00393	Putative single-stranded nucleic acids-binding domain
BAFK78_RS02205	SM01245	BAFK78_RS02205
BAFK78_RS02225	SM00970	Sexual stage antigen s48/45 domain
BAFK78_RS02275	SM00465	GIY-YIG type nucleases (URI domain)
BAFK78_RS02280	SM00060	Fibronectin type 3 domain
BAFK78_RS02285	SM00028	Tetratricopeptide repeats
BAFK78_RS02315	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS02325	SM00562	BAFK78_RS02325
BAFK78_RS02340	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS02390	SM01403	BAFK78_RS02390
BAFK78_RS02410	SM01382	BAFK78_RS02410
BAFK78_RS02410	SM01383	BAFK78_RS02410
BAFK78_RS02425	SM00322	K homology RNA-binding domain
BAFK78_RS02445	SM01374	BAFK78_RS02445
BAFK78_RS02450	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BAFK78_RS02510	SM00662	RNA polymerases D
BAFK78_RS02520	SM00322	K homology RNA-binding domain
BAFK78_RS02520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BAFK78_RS02535	SM00909	Sporulation and spore germination
BAFK78_RS02565	SM00873	B3/4 domain
BAFK78_RS02565	SM00874	tRNA synthetase B5 domain
BAFK78_RS02575	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BAFK78_RS02580	SM00271	DnaJ molecular chaperone homology domain
BAFK78_RS02645	SM00849	Metallo-beta-lactamase superfamily
BAFK78_RS02675	SM00028	Tetratricopeptide repeats
BAFK78_RS02690	SM00838	Elongation factor G C-terminus
BAFK78_RS02690	SM00889	Elongation factor G, domain IV
BAFK78_RS02700	SM00028	Tetratricopeptide repeats
BAFK78_RS02710	SM01400	BAFK78_RS02710
BAFK78_RS02730	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BAFK78_RS02730	SM00474	3'-5' exonuclease
BAFK78_RS02730	SM00475	5'-3' exonuclease
BAFK78_RS02730	SM00482	DNA polymerase A domain
BAFK78_RS02745	SM00448	cheY-homologous receiver domain
BAFK78_RS02750	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BAFK78_RS02750	SM00292	breast cancer carboxy-terminal domain
BAFK78_RS02750	SM00532	Ligase N family
BAFK78_RS02790	SM00387	Histidine kinase-like ATPases
BAFK78_RS02795	SM01350	BAFK78_RS02795
BAFK78_RS02815	SM00260	Two component signalling adaptor domain
BAFK78_RS02825	SM00073	Histidine Phosphotransfer domain
BAFK78_RS02825	SM00260	Two component signalling adaptor domain
BAFK78_RS02825	SM00387	Histidine kinase-like ATPases
BAFK78_RS02825	SM01231	BAFK78_RS02825
BAFK78_RS02840	SM00448	cheY-homologous receiver domain
BAFK78_RS02860	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS02890	SM00481	DNA polymerase alpha chain like domain
BAFK78_RS02900	SM00487	DEAD-like helicases superfamily
BAFK78_RS02900	SM00490	helicase superfamily c-terminal domain
BAFK78_RS02945	SM00650	Ribosomal RNA adenine dimethylases
BAFK78_RS02965	SM00836	DALR anticodon binding domain
BAFK78_RS02965	SM01016	Arginyl tRNA synthetase N terminal dom
BAFK78_RS02975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BAFK78_RS02980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BAFK78_RS03005	SM00271	DnaJ molecular chaperone homology domain
BAFK78_RS03020	SM00936	Penicillin-binding protein 5, C-terminal domain 
BAFK78_RS03070	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS03070	SM00994	ClpX C4-type zinc finger
BAFK78_RS03070	SM01086	C-terminal, D2-small domain, of ClpB protein
BAFK78_RS03075	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS03075	SM00464	Found in ATP-dependent protease La (LON)
BAFK78_RS03080	SM00363	S4 RNA-binding domain
BAFK78_RS03080	SM01390	BAFK78_RS03080
BAFK78_RS03130	SM00487	DEAD-like helicases superfamily
BAFK78_RS03130	SM00490	helicase superfamily c-terminal domain
BAFK78_RS03130	SM00982	BAFK78_RS03130
BAFK78_RS03130	SM01058	CarD-like/TRCF domain
BAFK78_RS03140	SM00257	Lysin motif
BAFK78_RS03185	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS03235	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS03280	SM01323	BAFK78_RS03280
BAFK78_RS03300	SM00271	DnaJ molecular chaperone homology domain
BAFK78_RS03305	SM00729	Elongator protein 3, MiaB family, Radical SAM
BAFK78_RS03315	SM00855	Phosphoglycerate mutase family
BAFK78_RS03355	SM00646	BAFK78_RS03355
BAFK78_RS03370	SM00073	Histidine Phosphotransfer domain
BAFK78_RS03370	SM00260	Two component signalling adaptor domain
BAFK78_RS03370	SM00387	Histidine kinase-like ATPases
BAFK78_RS03370	SM01231	BAFK78_RS03370
BAFK78_RS03375	SM00138	Methyltransferase, chemotaxis proteins 
BAFK78_RS03375	SM00260	Two component signalling adaptor domain
BAFK78_RS03385	SM00448	cheY-homologous receiver domain
BAFK78_RS03410	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS03425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BAFK78_RS03430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BAFK78_RS03485	SM00838	Elongation factor G C-terminus
BAFK78_RS03485	SM00889	Elongation factor G, domain IV
BAFK78_RS03495	SM00962	SRP54-type protein, GTPase domain
BAFK78_RS03495	SM00963	SRP54-type protein, helical bundle domain
BAFK78_RS03545	SM00358	Double-stranded RNA binding motif
BAFK78_RS03545	SM00535	Ribonuclease III family
BAFK78_RS03580	SM00400	zinc finger
BAFK78_RS03580	SM00493	BAFK78_RS03580
BAFK78_RS03595	SM00028	Tetratricopeptide repeats
BAFK78_RS03625	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BAFK78_RS03640	SM01118	BAFK78_RS03640
BAFK78_RS03680	SM00470	ParB-like nuclease domain
BAFK78_RS03725	SM00883	Chaperonin 10 Kd subunit
BAFK78_RS03730	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS03755	SM00478	endonuclease III
BAFK78_RS03795	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS03800	SM00849	Metallo-beta-lactamase superfamily
BAFK78_RS03835	SM00257	Lysin motif
BAFK78_RS03840	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS03840	SM00448	cheY-homologous receiver domain
BAFK78_RS03845	SM00387	Histidine kinase-like ATPases
BAFK78_RS03845	SM00388	His Kinase A (phosphoacceptor) domain
BAFK78_RS03980	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS04015	SM00935	Outer membrane protein (OmpH-like)
BAFK78_RS04020	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BAFK78_RS04020	SM00534	ATPase domain of DNA mismatch repair MUTS family
BAFK78_RS04035	SM00316	Ribosomal protein S1-like RNA-binding domain
BAFK78_RS04035	SM00322	K homology RNA-binding domain
BAFK78_RS04055	SM01387	BAFK78_RS04055
BAFK78_RS04060	SM00316	Ribosomal protein S1-like RNA-binding domain
BAFK78_RS04060	SM00322	K homology RNA-binding domain
BAFK78_RS04105	SM00363	S4 RNA-binding domain
BAFK78_RS04160	SM00487	DEAD-like helicases superfamily
BAFK78_RS04160	SM00490	helicase superfamily c-terminal domain
BAFK78_RS04160	SM00847	Helicase associated domain (HA2)  Add an annotation
BAFK78_RS04165	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BAFK78_RS04165	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BAFK78_RS04165	SM00493	BAFK78_RS04165
BAFK78_RS04195	SM00382	ATPases associated with a variety of cellular activities
BAFK78_RS04195	SM01086	C-terminal, D2-small domain, of ClpB protein
BAFK78_RS04205	SM00487	DEAD-like helicases superfamily
BAFK78_RS04205	SM00490	helicase superfamily c-terminal domain
BAFK78_RS04785	SM00490	helicase superfamily c-terminal domain
BAFK78_RS05045	SM00490	helicase superfamily c-terminal domain
BAFK78_RS05675	SM00487	DEAD-like helicases superfamily
BAFK78_RS05885	SM00487	DEAD-like helicases superfamily
BAFK78_RS06090	SM00487	DEAD-like helicases superfamily
