locus-tag class description BB_0002 PF00933 Glycosyl hydrolase family 3 N terminal domain BB_0004 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BB_0004 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BB_0004 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB_0004 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB_0005 PF00579 tRNA synthetases class I (W and Y) BB_0006 PF01594 AI-2E family transporter BB_0008 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_0009 PF07949 YbbR-like protein BB_0010 PF01648 4'-phosphopantetheinyl transferase superfamily BB_0011 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) BB_0012 PF01416 tRNA pseudouridine synthase BB_0014 PF00271 Helicase conserved C-terminal domain BB_0014 PF17764 3′ DNA-binding domain (3′BD) BB_0014 PF18074 Primosomal protein N C-terminal domain BB_0014 PF04851 Type III restriction enzyme, res subunit BB_0014 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_0015 PF00485 Phosphoribulokinase / Uridine kinase family BB_0017 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BB_0017 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BB_0018 PF00849 RNA pseudouridylate synthase BB_0020 PF00365 Phosphofructokinase BB_0022 PF17864 RuvB AAA lid domain BB_0022 PF05491 RuvB C-terminal winged helix domain BB_0022 PF05496 Holliday junction DNA helicase RuvB P-loop domain BB_0023 PF01330 RuvA N terminal domain BB_0024 PF07995 Glucose / Sorbosone dehydrogenase BB_0025 PF01709 Transcriptional regulator BB_0026 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BB_0026 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BB_0029 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BB_0031 PF10502 Signal peptidase, peptidase S26 BB_0032 PF03781 Sulfatase-modifying factor enzyme 1 BB_0032 PF08308 PEGA domain BB_0033 PF01668 SmpB protein BB_0035 PF00521 DNA gyrase/topoisomerase IV, subunit A BB_0036 PF00986 DNA gyrase B subunit, carboxyl terminus BB_0036 PF01751 Toprim domain BB_0036 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0036 PF00204 DNA gyrase B BB_0037 PF01553 Acyltransferase BB_0040 PF03705 CheR methyltransferase, all-alpha domain BB_0040 PF01739 CheR methyltransferase, SAM binding domain BB_0042 PF01895 PhoU domain BB_0045 PF06470 SMC proteins Flexible Hinge Domain BB_0045 PF02463 RecF/RecN/SMC N terminal domain BB_0046 PF01351 Ribonuclease HII BB_0050 PF02592 Putative vitamin uptake transporter BB_0052 PF00588 SpoU rRNA Methylase family BB_0053 PF03167 Uracil DNA glycosylase superfamily BB_0054 PF03840 Preprotein translocase SecG subunit BB_0055 PF00121 Triosephosphate isomerase BB_0056 PF00162 Phosphoglycerate kinase BB_0057 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BB_0057 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BB_0059 PF03471 Transporter associated domain BB_0059 PF00571 CBS domain BB_0060 PF02130 Uncharacterized protein family UPF0054 BB_0061 PF00085 Thioredoxin BB_0062 PF04452 RNA methyltransferase BB_0063 PF03793 PASTA domain BB_0064 PF00551 Formyl transferase BB_0064 PF02911 Formyl transferase, C-terminal domain BB_0065 PF01327 Polypeptide deformylase BB_0067 PF00557 Metallopeptidase family M24 BB_0067 PF01321 Creatinase/Prolidase N-terminal domain BB_0069 PF02073 Thermophilic metalloprotease (M29) BB_0070 PF02681 Divergent PAP2 family BB_0076 PF02881 SRP54-type protein, helical bundle domain BB_0076 PF00448 SRP54-type protein, GTPase domain BB_0080 PF00005 ABC transporter BB_0084 PF00266 Aminotransferase class-V BB_0085 PF01592 NifU-like N terminal domain BB_0086 PF13335 Magnesium chelatase, subunit ChlI C-terminal BB_0086 PF01078 Magnesium chelatase, subunit ChlI BB_0087 PF00056 lactate/malate dehydrogenase, NAD binding domain BB_0087 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BB_0088 PF00009 Elongation factor Tu GTP binding domain BB_0088 PF06421 GTP-binding protein LepA C-terminus BB_0088 PF14492 Elongation Factor G, domain II BB_0088 PF00679 Elongation factor G C-terminus BB_0088 PF03144 Elongation factor Tu domain 2 BB_0092 PF01813 ATP synthase subunit D BB_0093 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB_0093 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB_0094 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB_0094 PF16886 ATPsynthase alpha/beta subunit N-term extension BB_0094 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB_0098 PF00488 MutS domain V BB_0098 PF01713 Smr domain BB_0099 PF03193 RsgA GTPase BB_0100 PF01177 Asp/Glu/Hydantoin racemase BB_0101 PF01336 OB-fold nucleic acid binding domain BB_0101 PF00152 tRNA synthetases class II (D, K and N) BB_0103 PF00156 Phosphoribosyl transferase domain BB_0104 PF13180 PDZ domain BB_0104 PF17820 PDZ domain BB_0105 PF00557 Metallopeptidase family M24 BB_0107 PF01029 NusB family BB_0109 PF00108 Thiolase, N-terminal domain BB_0109 PF02803 Thiolase, C-terminal domain BB_0111 PF00772 DnaB-like helicase N terminal domain BB_0111 PF03796 DnaB-like helicase C terminal domain BB_0112 PF01281 Ribosomal protein L9, N-terminal domain BB_0112 PF03948 Ribosomal protein L9, C-terminal domain BB_0113 PF01084 Ribosomal protein S18 BB_0114 PF00436 Single-strand binding protein family BB_0115 PF01250 Ribosomal protein S6 BB_0116 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BB_0116 PF00367 phosphotransferase system, EIIB BB_0116 PF02378 Phosphotransferase system, EIIC BB_0117 PF03006 Haemolysin-III related BB_0118 PF17820 PDZ domain BB_0118 PF02163 Peptidase family M50 BB_0120 PF01255 Putative undecaprenyl diphosphate synthase BB_0121 PF01765 Ribosome recycling factor BB_0122 PF00889 Elongation factor TS BB_0123 PF00318 Ribosomal protein S2 BB_0127 PF00575 S1 RNA binding domain BB_0128 PF02224 Cytidylate kinase BB_0129 PF01479 S4 domain BB_0129 PF00849 RNA pseudouridylate synthase BB_0131 PF00154 recA bacterial DNA recombination protein BB_0132 PF03449 Transcription elongation factor, N-terminal BB_0132 PF01272 Transcription elongation factor, GreA/GreB, C-term BB_0135 PF03129 Anticodon binding domain BB_0135 PF13393 Histidyl-tRNA synthetase BB_0136 PF00905 Penicillin binding protein transpeptidase domain BB_0136 PF03717 Penicillin-binding Protein dimerisation domain BB_0136 PF03793 PASTA domain BB_0137 PF00501 AMP-binding enzyme BB_0143 PF01809 Putative membrane protein insertion efficiency factor BB_0144 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BB_0145 PF00528 Binding-protein-dependent transport system inner membrane component BB_0146 PF00005 ABC transporter BB_0146 PF00571 CBS domain BB_0147 PF00669 Bacterial flagellin N-terminal helical region BB_0147 PF00460 Flagella basal body rod protein BB_0147 PF00700 Bacterial flagellin C-terminal helical region BB_0149 PF07195 Flagellar hook-associated protein 2 C-terminus BB_0149 PF02465 Flagellar hook-associated protein 2 N-terminus BB_0151 PF01979 Amidohydrolase family BB_0152 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BB_0153 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BB_0153 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BB_0154 PF02810 SEC-C motif BB_0154 PF07517 SecA DEAD-like domain BB_0154 PF01043 SecA preprotein cross-linking domain BB_0154 PF07516 SecA Wing and Scaffold domain BB_0160 PF00842 Alanine racemase, C-terminal domain BB_0160 PF01168 Alanine racemase, N-terminal domain BB_0164 PF01699 Sodium/calcium exchanger protein BB_0166 PF02446 4-alpha-glucanotransferase BB_0169 PF01176 Translation initiation factor 1A / IF-1 BB_0173 PF00092 von Willebrand factor type A domain BB_0176 PF07726 ATPase family associated with various cellular activities (AAA) BB_0176 PF17863 AAA lid domain BB_0177 PF02527 rRNA small subunit methyltransferase G BB_0178 PF13932 GidA associated domain BB_0178 PF01134 Glucose inhibited division protein A BB_0179 PF12631 MnmE helical domain BB_0179 PF01926 50S ribosome-binding GTPase BB_0179 PF10396 GTP-binding protein TrmE N-terminus BB_0181 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0181 PF07196 Flagellin hook IN motif BB_0182 PF00669 Bacterial flagellin N-terminal helical region BB_0182 PF00700 Bacterial flagellin C-terminal helical region BB_0183 PF02623 FliW protein BB_0184 PF02599 Global regulator protein family BB_0185 PF00814 Glycoprotease family BB_0186 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BB_0188 PF00453 Ribosomal protein L20 BB_0189 PF01632 Ribosomal protein L35 BB_0190 PF05198 Translation initiation factor IF-3, N-terminal domain BB_0190 PF00707 Translation initiation factor IF-3, C-terminal domain BB_0194 PF01026 TatD related DNase BB_0196 PF00472 RF-1 domain BB_0196 PF03462 PCRF domain BB_0197 PF05175 Methyltransferase small domain BB_0198 PF04607 Region found in RelA / SpoT proteins BB_0198 PF02824 TGS domain BB_0200 PF01820 D-ala D-ala ligase N-terminus BB_0200 PF07478 D-ala D-ala ligase C-terminus BB_0201 PF01225 Mur ligase family, catalytic domain BB_0201 PF02875 Mur ligase family, glutamate ligase domain BB_0201 PF08245 Mur ligase middle domain BB_0202 PF01595 Cyclin M transmembrane N-terminal domain BB_0202 PF00571 CBS domain BB_0202 PF03471 Transporter associated domain BB_0203 PF01145 SPFH domain / Band 7 family BB_0204 PF01145 SPFH domain / Band 7 family BB_0207 PF00483 Nucleotidyl transferase BB_0211 PF01119 DNA mismatch repair protein, C-terminal domain BB_0211 PF08676 MutL C terminal dimerisation domain BB_0214 PF01132 Elongation factor P (EF-P) OB domain BB_0214 PF08207 Elongation factor P (EF-P) KOW-like domain BB_0214 PF09285 Elongation factor P, C-terminal BB_0215 PF12849 PBP superfamily domain BB_0216 PF00528 Binding-protein-dependent transport system inner membrane component BB_0217 PF00528 Binding-protein-dependent transport system inner membrane component BB_0218 PF00005 ABC transporter BB_0219 PF02535 ZIP Zinc transporter BB_0220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BB_0220 PF01411 tRNA synthetases class II (A) BB_0221 PF14842 FliG N-terminal domain BB_0221 PF14841 FliG middle domain BB_0221 PF01706 FliG C-terminal domain BB_0222 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BB_0225 PF01207 Dihydrouridine synthase (Dus) BB_0226 PF02403 Seryl-tRNA synthetase N-terminal domain BB_0226 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB_0228 PF08367 Peptidase M16C associated BB_0228 PF00675 Insulinase (Peptidase family M16) BB_0228 PF05193 Peptidase M16 inactive domain BB_0229 PF01197 Ribosomal protein L31 BB_0230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB_0230 PF07497 Rho termination factor, RNA-binding domain BB_0232 PF00216 Bacterial DNA-binding protein BB_0233 PF01649 Ribosomal protein S20 BB_0235 PF01926 50S ribosome-binding GTPase BB_0235 PF06071 Protein of unknown function (DUF933) BB_0237 PF00795 Carbon-nitrogen hydrolase BB_0239 PF01712 Deoxynucleoside kinase BB_0240 PF00230 Major intrinsic protein BB_0241 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BB_0241 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BB_0243 PF01266 FAD dependent oxidoreductase BB_0243 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BB_0246 PF01551 Peptidase family M23 BB_0247 PF01725 Ham1 family BB_0248 PF08439 Oligopeptidase F BB_0248 PF01432 Peptidase family M3 BB_0250 PF09335 SNARE associated Golgi protein BB_0251 PF08264 Anticodon-binding domain of tRNA BB_0251 PF00133 tRNA synthetases class I (I, L, M and V) BB_0251 PF09334 tRNA synthetases class I (M) BB_0251 PF13603 Leucyl-tRNA synthetase, Domain 2 BB_0253 PF05362 Lon protease (S16) C-terminal proteolytic domain BB_0253 PF00004 ATPase family associated with various cellular activities (AAA) BB_0253 PF02190 ATP-dependent protease La (LON) substrate-binding domain BB_0254 PF17768 RecJ OB domain BB_0254 PF02272 DHHA1 domain BB_0254 PF01368 DHH family BB_0255 PF01551 Peptidase family M23 BB_0255 PF08525 Opacity-associated protein A N-terminal motif BB_0255 PF01476 LysM domain BB_0256 PF01165 Ribosomal protein S21 BB_0257 PF17854 FtsK alpha domain BB_0257 PF09397 Ftsk gamma domain BB_0257 PF01580 FtsK/SpoIIIE family BB_0258 PF02673 Bacitracin resistance protein BacA BB_0259 PF14718 Soluble lytic murein transglycosylase L domain BB_0259 PF01464 Transglycosylase SLT domain BB_0262 PF01551 Peptidase family M23 BB_0262 PF08460 Bacterial SH3 domain BB_0263 PF10502 Signal peptidase, peptidase S26 BB_0264 PF00012 Hsp70 protein BB_0269 PF10609 NUBPL iron-transfer P-loop NTPase BB_0270 PF00448 SRP54-type protein, GTPase domain BB_0271 PF00771 FHIPEP family BB_0272 PF01312 FlhB HrpN YscU SpaS Family BB_0273 PF01311 Bacterial export proteins, family 1 BB_0274 PF01313 Bacterial export proteins, family 3 BB_0275 PF00813 FliP family BB_0277 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BB_0278 PF02154 Flagellar motor switch protein FliM BB_0278 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BB_0279 PF03748 Flagellar basal body-associated protein FliL BB_0280 PF13677 Membrane MotB of proton-channel complex MotA/MotB BB_0280 PF00691 OmpA family BB_0281 PF01618 MotA/TolQ/ExbB proton channel family BB_0282 PF06289 Flagellar and Swarming motility proteins BB_0283 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0283 PF00460 Flagella basal body rod protein BB_0283 PF07559 Flagellar basal body protein FlaE BB_0284 PF03963 Flagellar hook capping protein - N-terminal region BB_0288 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB_0288 PF18269 T3SS EscN ATPase C-terminal domain BB_0288 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB_0289 PF02108 Flagellar assembly protein FliH BB_0290 PF14841 FliG middle domain BB_0290 PF14842 FliG N-terminal domain BB_0290 PF01706 FliG C-terminal domain BB_0291 PF08345 Flagellar M-ring protein C-terminal BB_0291 PF01514 Secretory protein of YscJ/FliF family BB_0292 PF02049 Flagellar hook-basal body complex protein FliE BB_0293 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0293 PF00460 Flagella basal body rod protein BB_0294 PF00460 Flagella basal body rod protein BB_0295 PF07724 AAA domain (Cdc48 subfamily) BB_0296 PF00227 Proteasome subunit BB_0297 PF02481 DNA recombination-mediator protein A BB_0298 PF00515 Tetratricopeptide repeat BB_0299 PF12327 FtsZ family, C-terminal domain BB_0299 PF00091 Tubulin/FtsZ family, GTPase domain BB_0300 PF02491 SHS2 domain inserted in FTSA BB_0301 PF03799 Cell division protein FtsQ BB_0301 PF08478 POTRA domain, FtsQ-type BB_0302 PF01098 Cell cycle protein BB_0303 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BB_0303 PF00953 Glycosyl transferase family 4 BB_0304 PF02875 Mur ligase family, glutamate ligase domain BB_0304 PF01225 Mur ligase family, catalytic domain BB_0304 PF08245 Mur ligase middle domain BB_0306 PF01795 MraW methylase family BB_0311 PF01513 ATP-NAD kinase BB_0312 PF01584 CheW-like domain BB_0313 PF01728 FtsJ-like methyltransferase BB_0314 PF00348 Polyprenyl synthetase BB_0318 PF00005 ABC transporter BB_0328 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB_0329 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB_0330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB_0332 PF00528 Binding-protein-dependent transport system inner membrane component BB_0333 PF00528 Binding-protein-dependent transport system inner membrane component BB_0333 PF12911 N-terminal TM domain of oligopeptide transport permease C BB_0334 PF00005 ABC transporter BB_0334 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB_0335 PF00005 ABC transporter BB_0335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB_0337 PF03952 Enolase, N-terminal domain BB_0337 PF00113 Enolase, C-terminal TIM barrel domain BB_0338 PF00380 Ribosomal protein S9/S16 BB_0339 PF00572 Ribosomal protein L13 BB_0341 PF02637 GatB domain BB_0341 PF02934 GatB/GatE catalytic domain BB_0342 PF01425 Amidase BB_0344 PF13361 UvrD-like helicase C-terminal domain BB_0344 PF00580 UvrD/REP helicase N-terminal domain BB_0348 PF00224 Pyruvate kinase, barrel domain BB_0348 PF02887 Pyruvate kinase, alpha/beta domain BB_0350 PF00830 Ribosomal L28 family BB_0358 PF04452 RNA methyltransferase BB_0359 PF17820 PDZ domain BB_0359 PF01471 Putative peptidoglycan binding domain BB_0359 PF03572 Peptidase family S41 BB_0361 PF10609 NUBPL iron-transfer P-loop NTPase BB_0362 PF01790 Prolipoprotein diacylglyceryl transferase BB_0363 PF00563 EAL domain BB_0364 PF02142 MGS-like domain BB_0366 PF02127 Aminopeptidase I zinc metalloprotease (M18) BB_0367 PF00367 phosphotransferase system, EIIB BB_0368 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BB_0368 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BB_0369 PF17871 AAA lid domain BB_0369 PF07724 AAA domain (Cdc48 subfamily) BB_0369 PF02861 Clp amino terminal domain, pathogenicity island component BB_0369 PF10431 C-terminal, D2-small domain, of ClpB protein BB_0369 PF00004 ATPase family associated with various cellular activities (AAA) BB_0370 PF00579 tRNA synthetases class I (W and Y) BB_0370 PF01479 S4 domain BB_0371 PF03129 Anticodon binding domain BB_0371 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB_0372 PF00749 tRNA synthetases class I (E and Q), catalytic domain BB_0375 PF01048 Phosphorylase superfamily BB_0376 PF00438 S-adenosylmethionine synthetase, N-terminal domain BB_0376 PF02772 S-adenosylmethionine synthetase, central domain BB_0376 PF02773 S-adenosylmethionine synthetase, C-terminal domain BB_0377 PF02664 S-Ribosylhomocysteinase (LuxS) BB_0379 PF01230 HIT domain BB_0380 PF03448 MgtE intracellular N domain BB_0380 PF01769 Divalent cation transporter BB_0380 PF00571 CBS domain BB_0381 PF01204 Trehalase BB_0382 PF02608 ABC transporter substrate-binding protein PnrA-like BB_0383 PF02608 ABC transporter substrate-binding protein PnrA-like BB_0384 PF02608 ABC transporter substrate-binding protein PnrA-like BB_0385 PF02608 ABC transporter substrate-binding protein PnrA-like BB_0386 PF00177 Ribosomal protein S7p/S5e BB_0387 PF00164 Ribosomal protein S12/S23 BB_0388 PF04998 RNA polymerase Rpb1, domain 5 BB_0388 PF00623 RNA polymerase Rpb1, domain 2 BB_0388 PF05000 RNA polymerase Rpb1, domain 4 BB_0388 PF04983 RNA polymerase Rpb1, domain 3 BB_0388 PF04997 RNA polymerase Rpb1, domain 1 BB_0389 PF00562 RNA polymerase Rpb2, domain 6 BB_0389 PF04565 RNA polymerase Rpb2, domain 3 BB_0389 PF04563 RNA polymerase beta subunit BB_0389 PF04561 RNA polymerase Rpb2, domain 2 BB_0389 PF10385 RNA polymerase beta subunit external 1 domain BB_0389 PF04560 RNA polymerase Rpb2, domain 7 BB_0390 PF00542 Ribosomal protein L7/L12 C-terminal domain BB_0390 PF16320 Ribosomal protein L7/L12 dimerisation domain BB_0391 PF00466 Ribosomal protein L10 BB_0392 PF00687 Ribosomal protein L1p/L10e family BB_0393 PF03946 Ribosomal protein L11, N-terminal domain BB_0393 PF00298 Ribosomal protein L11, RNA binding domain BB_0394 PF02357 Transcription termination factor nusG BB_0395 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BB_0396 PF00471 Ribosomal protein L33 BB_0399 PF12796 Ankyrin repeats (3 copies) BB_0402 PF09180 Prolyl-tRNA synthetase, C-terminal BB_0402 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB_0402 PF03129 Anticodon binding domain BB_0407 PF01238 Phosphomannose isomerase type I BB_0408 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB_0408 PF02378 Phosphotransferase system, EIIC BB_0408 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB_0414 PF01739 CheR methyltransferase, SAM binding domain BB_0414 PF03705 CheR methyltransferase, all-alpha domain BB_0415 PF01339 CheB methylesterase BB_0415 PF00072 Response regulator receiver domain BB_0417 PF05191 Adenylate kinase, active site lid BB_0419 PF00072 Response regulator receiver domain BB_0420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BB_0420 PF00512 His Kinase A (phospho-acceptor) domain BB_0420 PF01627 Hpt domain BB_0420 PF00072 Response regulator receiver domain BB_0420 PF00672 HAMP domain BB_0420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0422 PF02245 Methylpurine-DNA glycosylase (MPG) BB_0427 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB_0430 PF09186 Domain of unknown function (DUF1949) BB_0430 PF01205 Uncharacterized protein family UPF0029 BB_0431 PF13614 AAA domain BB_0434 PF17762 HTH domain found in ParB protein BB_0434 PF02195 ParB-like nuclease domain BB_0435 PF00521 DNA gyrase/topoisomerase IV, subunit A BB_0435 PF03989 DNA gyrase C-terminal domain, beta-propeller BB_0436 PF00986 DNA gyrase B subunit, carboxyl terminus BB_0436 PF00204 DNA gyrase B BB_0436 PF01751 Toprim domain BB_0436 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0437 PF11638 DnaA N-terminal domain BB_0437 PF00308 Bacterial dnaA protein BB_0437 PF08299 Bacterial dnaA protein helix-turn-helix BB_0438 PF02768 DNA polymerase III beta subunit, C-terminal domain BB_0438 PF02767 DNA polymerase III beta subunit, central domain BB_0438 PF00712 DNA polymerase III beta subunit, N-terminal domain BB_0440 PF00468 Ribosomal protein L34 BB_0441 PF00825 Ribonuclease P BB_0442 PF02096 60Kd inner membrane protein BB_0444 PF01370 NAD dependent epimerase/dehydratase family BB_0445 PF01116 Fructose-bisphosphate aldolase class-II BB_0446 PF00152 tRNA synthetases class II (D, K and N) BB_0446 PF02938 GAD domain BB_0446 PF01336 OB-fold nucleic acid binding domain BB_0447 PF00999 Sodium/hydrogen exchanger family BB_0450 PF04552 Sigma-54, DNA binding domain BB_0450 PF04963 Sigma-54 factor, core binding domain BB_0450 PF00309 Sigma-54 factor, Activator interacting domain (AID) BB_0451 PF02417 Chromate transporter BB_0453 PF00924 Mechanosensitive ion channel BB_0453 PF05552 Conserved TM helix BB_0454 PF13439 Glycosyltransferase Family 4 BB_0454 PF00534 Glycosyl transferases group 1 BB_0457 PF08459 UvrC Helix-hairpin-helix N-terminal BB_0457 PF01541 GIY-YIG catalytic domain BB_0461 PF12169 DNA polymerase III subunits gamma and tau domain III BB_0462 PF02575 YbaB/EbfC DNA-binding family BB_0463 PF00334 Nucleoside diphosphate kinase BB_0466 PF00005 ABC transporter BB_0466 PF12399 Branched-chain amino acid ATP-binding cassette transporter BB_0467 PF02578 Multi-copper polyphenol oxidoreductase laccase BB_0468 PF01784 NIF3 (NGG1p interacting factor 3) BB_0469 PF01252 Signal peptidase (SPase) II BB_0472 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BB_0473 PF01554 MatE BB_0476 PF03144 Elongation factor Tu domain 2 BB_0476 PF00009 Elongation factor Tu GTP binding domain BB_0476 PF03143 Elongation factor Tu C-terminal domain BB_0477 PF00338 Ribosomal protein S10p/S20e BB_0478 PF00297 Ribosomal protein L3 BB_0479 PF00573 Ribosomal protein L4/L1 family BB_0480 PF00276 Ribosomal protein L23 BB_0481 PF03947 Ribosomal Proteins L2, C-terminal domain BB_0481 PF00181 Ribosomal Proteins L2, RNA binding domain BB_0482 PF00203 Ribosomal protein S19 BB_0483 PF00237 Ribosomal protein L22p/L17e BB_0484 PF00189 Ribosomal protein S3, C-terminal domain BB_0484 PF07650 KH domain BB_0485 PF00252 Ribosomal protein L16p/L10e BB_0486 PF00831 Ribosomal L29 protein BB_0487 PF00366 Ribosomal protein S17 BB_0488 PF00238 Ribosomal protein L14p/L23e BB_0489 PF00467 KOW motif BB_0489 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BB_0490 PF00281 Ribosomal protein L5 BB_0490 PF00673 ribosomal L5P family C-terminus BB_0491 PF00253 Ribosomal protein S14p/S29e BB_0492 PF00410 Ribosomal protein S8 BB_0493 PF00347 Ribosomal protein L6 BB_0494 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BB_0495 PF03719 Ribosomal protein S5, C-terminal domain BB_0495 PF00333 Ribosomal protein S5, N-terminal domain BB_0496 PF00327 Ribosomal protein L30p/L7e BB_0497 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BB_0498 PF00344 SecY translocase BB_0499 PF00444 Ribosomal protein L36 BB_0500 PF00416 Ribosomal protein S13/S18 BB_0501 PF00411 Ribosomal protein S11 BB_0502 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BB_0502 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BB_0502 PF01000 RNA polymerase Rpb3/RpoA insert domain BB_0503 PF01196 Ribosomal protein L17 BB_0504 PF12072 Domain of unknown function (DUF3552) BB_0504 PF00013 KH domain BB_0504 PF01966 HD domain BB_0505 PF13277 YmdB-like protein BB_0506 PF01479 S4 domain BB_0506 PF01728 FtsJ-like methyltransferase BB_0508 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BB_0508 PF01926 50S ribosome-binding GTPase BB_0513 PF01409 tRNA synthetases class II core domain (F) BB_0514 PF03484 tRNA synthetase B5 domain BB_0514 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BB_0515 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB_0517 PF01556 DnaJ C terminal domain BB_0517 PF00684 DnaJ central domain BB_0517 PF00226 DnaJ domain BB_0518 PF00012 Hsp70 protein BB_0519 PF01025 GrpE BB_0527 PF03309 Type III pantothenate kinase BB_0528 PF00248 Aldo/keto reductase family BB_0531 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BB_0533 PF12706 Beta-lactamase superfamily domain BB_0533 PF03099 Biotin/lipoate A/B protein ligase family BB_0534 PF03372 Endonuclease/Exonuclease/phosphatase family BB_0536 PF00675 Insulinase (Peptidase family M16) BB_0536 PF05193 Peptidase M16 inactive domain BB_0539 PF01027 Inhibitor of apoptosis-promoting Bax1 BB_0540 PF00679 Elongation factor G C-terminus BB_0540 PF14492 Elongation Factor G, domain II BB_0540 PF03144 Elongation factor Tu domain 2 BB_0540 PF00009 Elongation factor Tu GTP binding domain BB_0540 PF03764 Elongation factor G, domain IV BB_0544 PF14572 Phosphoribosyl synthetase-associated domain BB_0544 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BB_0547 PF01121 Dephospho-CoA kinase BB_0548 PF01367 5'-3' exonuclease, C-terminal SAM fold BB_0548 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BB_0548 PF01612 3'-5' exonuclease BB_0548 PF00476 DNA polymerase family A BB_0551 PF00072 Response regulator receiver domain BB_0552 PF01653 NAD-dependent DNA ligase adenylation domain BB_0552 PF03120 NAD-dependent DNA ligase OB-fold domain BB_0552 PF00533 BRCA1 C Terminus (BRCT) domain BB_0557 PF00381 PTS HPr component phosphorylation site BB_0558 PF02896 PEP-utilising enzyme, TIM barrel domain BB_0558 PF00391 PEP-utilising enzyme, mobile domain BB_0558 PF05524 PEP-utilising enzyme, N-terminal BB_0559 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BB_0560 PF00183 Hsp90 protein BB_0561 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BB_0561 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BB_0565 PF01584 CheW-like domain BB_0567 PF02895 Signal transducing histidine kinase, homodimeric domain BB_0567 PF01584 CheW-like domain BB_0567 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0567 PF07194 P2 response regulator binding domain BB_0567 PF01627 Hpt domain BB_0568 PF01339 CheB methylesterase BB_0570 PF00196 Bacterial regulatory proteins, luxR family BB_0570 PF00072 Response regulator receiver domain BB_0571 PF00696 Amino acid kinase family BB_0572 PF00535 Glycosyl transferase family 2 BB_0573 PF00005 ABC transporter BB_0575 PF00117 Glutamine amidotransferase class-I BB_0575 PF06418 CTP synthase N-terminus BB_0578 PF17202 Single cache domain 3 BB_0578 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0578 PF00672 HAMP domain BB_0579 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BB_0579 PF14579 Helix-hairpin-helix motif BB_0579 PF07733 Bacterial DNA polymerase III alpha NTPase domain BB_0579 PF02811 PHP domain BB_0579 PF01336 OB-fold nucleic acid binding domain BB_0581 PF00271 Helicase conserved C-terminal domain BB_0581 PF00270 DEAD/DEAH box helicase BB_0581 PF17191 RecG wedge domain BB_0583 PF01554 MatE BB_0585 PF08245 Mur ligase middle domain BB_0586 PF02388 FemAB family BB_0587 PF01588 Putative tRNA binding domain BB_0587 PF09334 tRNA synthetases class I (M) BB_0587 PF08264 Anticodon-binding domain of tRNA BB_0588 PF01048 Phosphorylase superfamily BB_0589 PF01515 Phosphate acetyl/butaryl transferase BB_0590 PF00398 Ribosomal RNA adenine dimethylase BB_0591 PF13567 Domain of unknown function (DUF4131) BB_0591 PF03772 Competence protein BB_0591 PF00753 Metallo-beta-lactamase superfamily BB_0593 PF00501 AMP-binding enzyme BB_0594 PF00750 tRNA synthetases class I (R) BB_0594 PF05746 DALR anticodon binding domain BB_0594 PF03485 Arginyl tRNA synthetase N terminal domain BB_0596 PF00672 HAMP domain BB_0596 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0596 PF12729 Four helix bundle sensory module for signal transduction BB_0597 PF00672 HAMP domain BB_0597 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0597 PF05227 CHASE3 domain BB_0598 PF01565 FAD binding domain BB_0598 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BB_0599 PF01406 tRNA synthetases class I (C) catalytic domain BB_0601 PF00464 Serine hydroxymethyltransferase BB_0602 PF01556 DnaJ C terminal domain BB_0602 PF00684 DnaJ central domain BB_0602 PF00226 DnaJ domain BB_0604 PF02652 L-lactate permease BB_0605 PF07943 Penicillin-binding protein 5, C-terminal domain BB_0605 PF00768 D-alanyl-D-alanine carboxypeptidase BB_0606 PF03975 CheD chemotactic sensory transduction BB_0607 PF00580 UvrD/REP helicase N-terminal domain BB_0607 PF13361 UvrD-like helicase C-terminal domain BB_0608 PF07687 Peptidase dimerisation domain BB_0608 PF01546 Peptidase family M20/M25/M40 BB_0610 PF05698 Bacterial trigger factor protein (TF) C-terminus BB_0610 PF05697 Bacterial trigger factor protein (TF) BB_0611 PF00574 Clp protease BB_0612 PF07724 AAA domain (Cdc48 subfamily) BB_0612 PF06689 ClpX C4-type zinc finger BB_0612 PF10431 C-terminal, D2-small domain, of ClpB protein BB_0613 PF05362 Lon protease (S16) C-terminal proteolytic domain BB_0613 PF00004 ATPase family associated with various cellular activities (AAA) BB_0613 PF02190 ATP-dependent protease La (LON) substrate-binding domain BB_0615 PF01479 S4 domain BB_0615 PF00163 Ribosomal protein S4/S9 N-terminal domain BB_0618 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BB_0620 PF00933 Glycosyl hydrolase family 3 N terminal domain BB_0622 PF00871 Acetokinase family BB_0623 PF00270 DEAD/DEAH box helicase BB_0623 PF17757 UvrB interaction domain BB_0623 PF03461 TRCF domain BB_0623 PF00271 Helicase conserved C-terminal domain BB_0623 PF02559 CarD-like/TRCF domain BB_0625 PF00877 NlpC/P60 family BB_0625 PF08239 Bacterial SH3 domain BB_0625 PF01476 LysM domain BB_0626 PF13331 Domain of unknown function (DUF4093) BB_0626 PF01751 Toprim domain BB_0627 PF02127 Aminopeptidase I zinc metalloprotease (M18) BB_0629 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB_0629 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB_0630 PF00294 pfkB family carbohydrate kinase BB_0632 PF13538 UvrD-like helicase C-terminal domain BB_0633 PF13361 UvrD-like helicase C-terminal domain BB_0633 PF00580 UvrD/REP helicase N-terminal domain BB_0633 PF12705 PD-(D/E)XK nuclease superfamily BB_0635 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BB_0635 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BB_0635 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BB_0636 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BB_0636 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BB_0638 PF03553 Na+/H+ antiporter family BB_0640 PF00528 Binding-protein-dependent transport system inner membrane component BB_0641 PF00528 Binding-protein-dependent transport system inner membrane component BB_0642 PF08402 TOBE domain BB_0642 PF00005 ABC transporter BB_0643 PF01926 50S ribosome-binding GTPase BB_0644 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BB_0645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BB_0645 PF00367 phosphotransferase system, EIIB BB_0645 PF02378 Phosphotransferase system, EIIC BB_0649 PF00118 TCP-1/cpn60 chaperonin family BB_0651 PF02699 Preprotein translocase subunit BB_0652 PF02355 Protein export membrane protein BB_0653 PF02355 Protein export membrane protein BB_0655 PF00226 DnaJ domain BB_0655 PF01556 DnaJ C terminal domain BB_0656 PF04055 Radical SAM superfamily BB_0656 PF06969 HemN C-terminal domain BB_0657 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BB_0658 PF00300 Histidine phosphatase superfamily (branch 1) BB_0659 PF01921 tRNA synthetases class I (K) BB_0660 PF07650 KH domain BB_0660 PF01926 50S ribosome-binding GTPase BB_0666 PF01520 N-acetylmuramoyl-L-alanine amidase BB_0668 PF04620 Flagellar filament outer layer protein Flaa BB_0669 PF01584 CheW-like domain BB_0669 PF02895 Signal transducing histidine kinase, homodimeric domain BB_0669 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0669 PF01627 Hpt domain BB_0669 PF07194 P2 response regulator binding domain BB_0670 PF01584 CheW-like domain BB_0672 PF00072 Response regulator receiver domain BB_0676 PF13419 Haloacid dehalogenase-like hydrolase BB_0677 PF00005 ABC transporter BB_0678 PF02653 Branched-chain amino acid transport system / permease component BB_0679 PF02653 Branched-chain amino acid transport system / permease component BB_0680 PF00672 HAMP domain BB_0680 PF02203 Tar ligand binding domain homologue BB_0680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0681 PF02203 Tar ligand binding domain homologue BB_0681 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0681 PF00672 HAMP domain BB_0683 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BB_0683 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BB_0684 PF01070 FMN-dependent dehydrogenase BB_0685 PF00368 Hydroxymethylglutaryl-coenzyme A reductase BB_0689 PF00188 Cysteine-rich secretory protein family BB_0690 PF00210 Ferritin-like domain BB_0691 PF14492 Elongation Factor G, domain II BB_0691 PF03764 Elongation factor G, domain IV BB_0691 PF00009 Elongation factor Tu GTP binding domain BB_0691 PF00679 Elongation factor G C-terminus BB_0691 PF03144 Elongation factor Tu domain 2 BB_0694 PF02978 Signal peptide binding domain BB_0694 PF02881 SRP54-type protein, helical bundle domain BB_0694 PF00448 SRP54-type protein, GTPase domain BB_0695 PF00886 Ribosomal protein S16 BB_0697 PF01782 RimM N-terminal domain BB_0698 PF01746 tRNA (Guanine-1)-methyltransferase BB_0699 PF01245 Ribosomal protein L19 BB_0702 PF01467 Cytidylyltransferase-like BB_0703 PF01783 Ribosomal L32p protein family BB_0704 PF00550 Phosphopantetheine attachment site BB_0705 PF00035 Double-stranded RNA binding motif BB_0705 PF14622 Ribonuclease-III-like BB_0706 PF12627 Probable RNA and SrmB- binding site of polymerase A BB_0706 PF13735 tRNA nucleotidyltransferase domain 2 putative BB_0706 PF01743 Poly A polymerase head domain BB_0709 PF02618 YceG-like family BB_0712 PF04539 Sigma-70 region 3 BB_0712 PF04542 Sigma-70 region 2 BB_0712 PF03979 Sigma-70 factor, region 1.1 BB_0712 PF00140 Sigma-70 factor, region 1.2 BB_0712 PF04545 Sigma-70, region 4 BB_0718 PF03793 PASTA domain BB_0718 PF03717 Penicillin-binding Protein dimerisation domain BB_0718 PF00905 Penicillin binding protein transpeptidase domain BB_0719 PF01098 Cell cycle protein BB_0720 PF03129 Anticodon binding domain BB_0720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB_0720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BB_0721 PF01066 CDP-alcohol phosphatidyltransferase BB_0724 PF02386 Cation transport protein BB_0726 PF17886 HSP20-like domain found in ArsA BB_0726 PF02374 Anion-transporting ATPase BB_0727 PF00365 Phosphofructokinase BB_0728 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB_0728 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BB_0729 PF00375 Sodium:dicarboxylate symporter family BB_0730 PF00342 Phosphoglucose isomerase BB_0731 PF17762 HTH domain found in ParB protein BB_0731 PF02195 ParB-like nuclease domain BB_0732 PF17092 Penicillin-binding protein OB-like domain BB_0732 PF00912 Transglycosylase BB_0732 PF00905 Penicillin binding protein transpeptidase domain BB_0734 PF01300 Telomere recombination BB_0734 PF03481 Putative GTP-binding controlling metal-binding BB_0735 PF05036 Sporulation related domain BB_0735 PF03330 Lytic transglycolase BB_0737 PF01207 Dihydrouridine synthase (Dus) BB_0738 PF10458 Valyl tRNA synthetase tRNA binding arm BB_0738 PF00133 tRNA synthetases class I (I, L, M and V) BB_0738 PF08264 Anticodon-binding domain of tRNA BB_0740 PF01266 FAD dependent oxidoreductase BB_0740 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BB_0741 PF00166 Chaperonin 10 Kd subunit BB_0742 PF00005 ABC transporter BB_0742 PF12848 ABC transporter BB_0745 PF00730 HhH-GPD superfamily base excision DNA repair protein BB_0745 PF00633 Helix-hairpin-helix motif BB_0746 PF00528 Binding-protein-dependent transport system inner membrane component BB_0746 PF12911 N-terminal TM domain of oligopeptide transport permease C BB_0747 PF00528 Binding-protein-dependent transport system inner membrane component BB_0752 PF09822 ABC-type uncharacterized transport system BB_0754 PF00005 ABC transporter BB_0755 PF12706 Beta-lactamase superfamily domain BB_0755 PF00753 Metallo-beta-lactamase superfamily BB_0756 PF01266 FAD dependent oxidoreductase BB_0757 PF00574 Clp protease BB_0761 PF01551 Peptidase family M23 BB_0763 PF00072 Response regulator receiver domain BB_0763 PF00158 Sigma-54 interaction domain BB_0763 PF02954 Bacterial regulatory protein, Fis family BB_0764 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0764 PF00989 PAS fold BB_0764 PF00512 His Kinase A (phospho-acceptor) domain BB_0764 PF13426 PAS domain BB_0764 PF13188 PAS domain BB_0765 PF09115 DNA polymerase III, delta subunit, C terminal BB_0767 PF03033 Glycosyltransferase family 28 N-terminal domain BB_0767 PF04101 Glycosyltransferase family 28 C-terminal domain BB_0769 PF00814 Glycoprotease family BB_0771 PF04539 Sigma-70 region 3 BB_0771 PF03979 Sigma-70 factor, region 1.1 BB_0771 PF04545 Sigma-70, region 4 BB_0771 PF04542 Sigma-70 region 2 BB_0771 PF00140 Sigma-70 factor, region 1.2 BB_0772 PF02119 Flagellar P-ring protein BB_0774 PF00460 Flagella basal body rod protein BB_0774 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0775 PF00460 Flagella basal body rod protein BB_0775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0777 PF00156 Phosphoribosyl transferase domain BB_0778 PF00829 Ribosomal prokaryotic L21 protein BB_0780 PF01016 Ribosomal L27 protein BB_0781 PF01926 50S ribosome-binding GTPase BB_0781 PF01018 GTP1/OBG BB_0782 PF01467 Cytidylyltransferase-like BB_0785 PF04026 SpoVG BB_0786 PF14693 Ribosomal protein TL5, C-terminal domain BB_0786 PF01386 Ribosomal L25p family BB_0787 PF01195 Peptidyl-tRNA hydrolase BB_0788 PF01171 PP-loop family BB_0789 PF00004 ATPase family associated with various cellular activities (AAA) BB_0789 PF17862 AAA+ lid domain BB_0789 PF01434 Peptidase family M41 BB_0789 PF06480 FtsH Extracellular BB_0793 PF02223 Thymidylate kinase BB_0795 PF01103 Surface antigen BB_0795 PF07244 Surface antigen variable number repeat BB_0797 PF05188 MutS domain II BB_0797 PF05192 MutS domain III BB_0797 PF05190 MutS family domain IV BB_0797 PF00488 MutS domain V BB_0797 PF01624 MutS domain I BB_0798 PF00156 Phosphoribosyl transferase domain BB_0799 PF02576 RimP N-terminal domain BB_0800 PF00575 S1 RNA binding domain BB_0800 PF08529 NusA N-terminal domain BB_0800 PF13184 NusA-like KH domain BB_0801 PF00009 Elongation factor Tu GTP binding domain BB_0801 PF11987 Translation-initiation factor 2 BB_0801 PF04760 Translation initiation factor IF-2, N-terminal region BB_0802 PF02033 Ribosome-binding factor A BB_0803 PF01509 TruB family pseudouridylate synthase (N terminal domain) BB_0804 PF00312 Ribosomal protein S15 BB_0805 PF00013 KH domain BB_0805 PF01138 3' exoribonuclease family, domain 1 BB_0805 PF00575 S1 RNA binding domain BB_0805 PF03725 3' exoribonuclease family, domain 2 BB_0805 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BB_0809 PF01702 Queuine tRNA-ribosyltransferase BB_0810 PF03023 Lipid II flippase MurJ BB_0812 PF02441 Flavoprotein BB_0812 PF04127 DNA / pantothenate metabolism flavoprotein BB_0814 PF00474 Sodium:solute symporter family BB_0817 PF01225 Mur ligase family, catalytic domain BB_0817 PF08245 Mur ligase middle domain BB_0817 PF02875 Mur ligase family, glutamate ligase domain BB_0818 PF03755 YicC-like family, N-terminal region BB_0818 PF08340 Domain of unknown function (DUF1732) BB_0827 PF00271 Helicase conserved C-terminal domain BB_0827 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BB_0827 PF04408 Helicase associated domain (HA2) BB_0827 PF00270 DEAD/DEAH box helicase BB_0828 PF01131 DNA topoisomerase BB_0828 PF13368 Topoisomerase C-terminal repeat BB_0828 PF01751 Toprim domain BB_0829 PF00149 Calcineurin-like phosphoesterase BB_0830 PF13476 AAA domain BB_0831 PF00480 ROK family BB_0833 PF08264 Anticodon-binding domain of tRNA BB_0833 PF00133 tRNA synthetases class I (I, L, M and V) BB_0834 PF00004 ATPase family associated with various cellular activities (AAA) BB_0834 PF07724 AAA domain (Cdc48 subfamily) BB_0834 PF17871 AAA lid domain BB_0834 PF10431 C-terminal, D2-small domain, of ClpB protein BB_0834 PF02861 Clp amino terminal domain, pathogenicity island component BB_0835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BB_0835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB_0835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BB_0835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB_0836 PF04851 Type III restriction enzyme, res subunit BB_0836 PF00271 Helicase conserved C-terminal domain BB_0836 PF02151 UvrB/uvrC motif BB_0836 PF12344 Ultra-violet resistance protein B BB_0836 PF17757 UvrB interaction domain BB_0837 PF17755 UvrA DNA-binding domain BB_0837 PF00005 ABC transporter BB_0837 PF17760 UvrA interaction domain BB_0842 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BB_0842 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BB_0843 PF03606 C4-dicarboxylate anaerobic carrier BB_A13 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_A19 PF18074 Primosomal protein N C-terminal domain BB_A19 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_A19 PF04851 Type III restriction enzyme, res subunit BB_A19 PF17764 3′ DNA-binding domain (3′BD) BB_A19 PF00271 Helicase conserved C-terminal domain BB_F0040 PF00849 RNA pseudouridylate synthase BB_F17 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_F30 PF00849 RNA pseudouridylate synthase BB_G23 PF00365 Phosphofructokinase BB_I08a PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB_I08a PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BB_I08a PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB_I08a PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BB_I22 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_I22 PF04851 Type III restriction enzyme, res subunit BB_I22 PF18074 Primosomal protein N C-terminal domain BB_I22 PF17764 3′ DNA-binding domain (3′BD) BB_I22 PF00271 Helicase conserved C-terminal domain BB_J0056 PF17764 3′ DNA-binding domain (3′BD) BB_J0056 PF04851 Type III restriction enzyme, res subunit BB_J0056 PF00271 Helicase conserved C-terminal domain BB_J0056 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_J0056 PF18074 Primosomal protein N C-terminal domain BB_K0059 PF00204 DNA gyrase B BB_K0059 PF00986 DNA gyrase B subunit, carboxyl terminus BB_K0059 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_K0059 PF01751 Toprim domain BB_K10 PF01594 AI-2E family transporter BB_K15 PF07949 YbbR-like protein BB_K52 PF00986 DNA gyrase B subunit, carboxyl terminus BB_K52 PF00204 DNA gyrase B BB_K52 PF01751 Toprim domain BB_K52 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_L20 PF00271 Helicase conserved C-terminal domain BB_L20 PF17764 3′ DNA-binding domain (3′BD) BB_L20 PF18074 Primosomal protein N C-terminal domain BB_L20 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_L20 PF04851 Type III restriction enzyme, res subunit BB_L21 PF04851 Type III restriction enzyme, res subunit BB_L21 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_L21 PF00271 Helicase conserved C-terminal domain BB_L21 PF17764 3′ DNA-binding domain (3′BD) BB_L21 PF18074 Primosomal protein N C-terminal domain BB_M26 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BB_M26 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BB_N26 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BB_N26 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BB_O26 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BB_O26 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BB_P20 PF00271 Helicase conserved C-terminal domain BB_P20 PF04851 Type III restriction enzyme, res subunit BB_P20 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_P20 PF18074 Primosomal protein N C-terminal domain BB_P20 PF17764 3′ DNA-binding domain (3′BD) BB_P21 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_P21 PF04851 Type III restriction enzyme, res subunit BB_P21 PF00271 Helicase conserved C-terminal domain BB_P21 PF17764 3′ DNA-binding domain (3′BD) BB_P21 PF18074 Primosomal protein N C-terminal domain BB_Q06 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BB_Q06 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB_Q06 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BB_Q06 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB_Q14 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_Q16 PF07949 YbbR-like protein BB_Q89 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BB_Q89 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BB_S14 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_S20 PF04851 Type III restriction enzyme, res subunit BB_S20 PF18074 Primosomal protein N C-terminal domain BB_S20 PF17764 3′ DNA-binding domain (3′BD) BB_S20 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_S20 PF00271 Helicase conserved C-terminal domain BB_S21 PF18074 Primosomal protein N C-terminal domain BB_S21 PF17764 3′ DNA-binding domain (3′BD) BB_S21 PF00271 Helicase conserved C-terminal domain BB_S21 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BB_S21 PF04851 Type III restriction enzyme, res subunit