locus-tag	class	description
BB_0002	COG1472	Belongs to the glycosyl hydrolase 3 family
BB_0004	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BB_0017	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BB_0031	COG0681	Belongs to the peptidase S26 family
BB_0045	COG1196	nuclear chromosome segregation
BB_0050	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BB_0068	COG0561	phosphatase activity
BB_0069	COG2309	aminopeptidase activity
BB_0070	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BB_0076	COG0552	protein localization to endoplasmic reticulum
BB_0080	COG1136	(ABC) transporter
BB_0086	COG0606	chelatase, subunit chli
BB_0104	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BB_0111	COG0305	Participates in initiation and elongation during chromosome replication
BB_0116	COG1263	PTS System
BB_0116	COG2190	(PTS) system
BB_0116	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB_0119	COG4589	Belongs to the CDS family
BB_0127	COG0539	negative regulation of cytoplasmic translation
BB_0136	COG0768	penicillin binding
BB_0137	COG1022	Amp-dependent synthetase and ligase
BB_0145	COG4176	ABC-type proline glycine betaine transport system permease component
BB_0146	COG4175	Glycine betaine
BB_0146	COG3448	diguanylate cyclase activity
BB_0151	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BB_0176	COG0714	Associated with various cellular activities
BB_0185	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BB_0194	COG0084	hydrolase, TatD family'
BB_0202	COG4536	flavin adenine dinucleotide binding
BB_0206	COG0742	ribosomal rna small subunit methyltransferase
BB_0207	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BB_0216	COG0573	inorganic phosphate transmembrane transporter activity
BB_0217	COG0581	inorganic phosphate transmembrane transporter activity
BB_0221	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BB_0225	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BB_0235	COG0012	GTP binding
BB_0239	COG1428	Deoxynucleoside kinase
BB_0240	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BB_0243	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BB_0246	COG0739	heme binding
BB_0254	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BB_0255	COG0739	heme binding
BB_0263	COG0681	Belongs to the peptidase S26 family
BB_0264	COG0443	Heat shock 70 kDa protein
BB_0280	COG1360	Flagellar Motor Protein
BB_0282	COG1582	Flagellar protein (FlbD)
BB_0284	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BB_0301	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BB_0312	COG0835	chemotaxis
BB_0332	COG0601	transmembrane transport
BB_0333	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BB_0334	COG0444	Belongs to the ABC transporter superfamily
BB_0335	COG4608	Belongs to the ABC transporter superfamily
BB_0344	COG0210	DNA helicase
BB_0359	COG0793	Belongs to the peptidase S41A family
BB_0361	COG0455	bacterial-type flagellum organization
BB_0368	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BB_0369	COG0542	response to heat
BB_0375	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BB_0380	COG2239	Acts as a magnesium transporter
BB_0408	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB_0408	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB_0408	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB_0421	COG0561	phosphatase activity
BB_0427	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BB_0430	COG1739	Uncharacterized protein family UPF0029
BB_0431	COG1192	Involved in chromosome partitioning
BB_0450	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BB_0453	COG0668	transmembrane transport
BB_0461	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BB_0466	COG1137	ATPase activity
BB_0499	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BB_0505	COG1692	metallophosphoesterase
BB_0506	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BB_0528	COG0667	Aldo Keto reductase
BB_0533	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BB_0533	COG0321	lipoyl(octanoyl) transferase activity
BB_0534	COG0708	Exodeoxyribonuclease III
BB_0536	COG0612	Peptidase, M16
BB_0551	COG2201	protein-glutamate methylesterase activity
BB_0561	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BB_0565	COG0835	chemotaxis
BB_0567	COG0643	Histidine kinase
BB_0567	COG2198	Histidine kinase
BB_0570	COG4566	intracellular signal transduction
BB_0571	COG0528	UMP kinase activity
BB_0572	COG1216	Glycosyl transferase, family 2
BB_0573	COG1121	(ABC) transporter
BB_0578	COG3290	protein histidine kinase activity
BB_0578	COG0840	transmembrane signaling receptor activity
BB_0583	COG0534	Mate efflux family protein
BB_0586	COG2348	transferase activity, transferring amino-acyl groups
BB_0588	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BB_0591	COG0658	competence protein
BB_0591	COG2333	competence protein COMEC
BB_0593	COG1022	Amp-dependent synthetase and ligase
BB_0596	COG0840	transmembrane signaling receptor activity
BB_0597	COG0840	transmembrane signaling receptor activity
BB_0597	COG5278	phosphoserine phosphatase activity
BB_0602	COG0484	heat shock protein binding
BB_0604	COG1620	l-lactate permease
BB_0605	COG1686	Belongs to the peptidase S11 family
BB_0607	COG0210	DNA helicase
BB_0608	COG2195	Cleaves the N-terminal amino acid of tripeptides
BB_0618	COG0295	cytidine deaminase activity
BB_0625	COG0791	NLP P60 protein
BB_0625	COG3103	Sh3 type 3 domain protein
BB_0625	COG1388	LysM domain
BB_0629	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BB_0629	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB_0629	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BB_0632	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BB_0635	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BB_0638	COG1757	Na H antiporter
BB_0640	COG1177	transmembrane transport
BB_0641	COG1176	ABC-type spermidine putrescine transport system, permease component I
BB_0643	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BB_0645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BB_0645	COG2190	(PTS) system
BB_0645	COG1263	PTS System
BB_0655	COG0484	heat shock protein binding
BB_0656	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BB_0666	COG0860	N-Acetylmuramoyl-L-alanine amidase
BB_0670	COG0835	chemotaxis
BB_0672	COG2201	protein-glutamate methylesterase activity
BB_0677	COG3845	ABC transporter
BB_0678	COG4603	Belongs to the binding-protein-dependent transport system permease family
BB_0679	COG1079	Belongs to the binding-protein-dependent transport system permease family
BB_0680	COG0840	transmembrane signaling receptor activity
BB_0681	COG0840	transmembrane signaling receptor activity
BB_0683	COG3425	synthase
BB_0690	COG0783	Belongs to the Dps family
BB_0694	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BB_0706	COG0617	tRNA 3'-terminal CCA addition
BB_0709	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BB_0715	COG1077	Cell shape determining protein MreB Mrl
BB_0718	COG0768	penicillin binding
BB_0719	COG0772	Belongs to the SEDS family
BB_0721	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BB_0724	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BB_0726	COG0003	Pfam Anion-transporting ATPase
BB_0728	COG0446	pyridine nucleotide-disulphide oxidoreductase
BB_0731	COG1475	DNA binding
BB_0734	COG0009	L-threonylcarbamoyladenylate synthase
BB_0735	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BB_0740	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BB_0740	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BB_0742	COG0488	(ABC) transporter
BB_0745	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BB_0746	COG4239	(ABC) transporter, permease
BB_0747	COG4168	peptide transport system, permease
BB_0754	COG1131	(ABC) transporter
BB_0756	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BB_0761	COG0739	heme binding
BB_0763	COG2204	response regulator
BB_0764	COG5002	protein histidine kinase activity
BB_0765	COG0470	DNA polymerase III
BB_0771	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BB_0793	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BB_0795	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BB_0798	COG1040	competence protein
BB_0814	COG4145	pantothenate transmembrane transporter activity
BB_0818	COG1561	YicC-like family, N-terminal region
BB_0830	COG0419	ATPase involved in DNA repair
BB_0831	COG1940	carbohydrate kinase activity
BB_0835	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BB_0843	COG1288	antiporter activity
BB_A13	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BB_I08a	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BB_M26	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BB_N26	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BB_O26	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BB_Q06	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BB_Q14	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria