BB_0002 PF00933 Glycosyl hydrolase family 3 N terminal domain BB_0004 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB_0004 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB_0005 PF00579 tRNA synthetases class I (W and Y) BB_0006 PF01594 BB_0006 BB_0008 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_0009 PF07949 YbbR-like protein BB_0010 PF01648 4'-phosphopantetheinyl transferase superfamily BB_0011 PF09986 BB_0011 BB_0012 PF01416 tRNA pseudouridine synthase BB_0014 PF00271 Helicase conserved C-terminal domain BB_0014 PF04851 Type III restriction enzyme, res subunit BB_0015 PF00485 Phosphoribulokinase / Uridine kinase family BB_0016 PF00581 Rhodanese-like domain BB_0017 PF02588 BB_0017 BB_0017 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BB_0018 PF00849 RNA pseudouridylate synthase BB_0020 PF00365 Phosphofructokinase BB_0022 PF05491 Holliday junction DNA helicase ruvB C-terminus BB_0022 PF05496 Holliday junction DNA helicase ruvB N-terminus BB_0023 PF01330 RuvA N terminal domain BB_0023 PF14520 Helix-hairpin-helix domain BB_0024 PF07995 Glucose / Sorbosone dehydrogenase BB_0025 PF01709 Transcriptional regulator BB_0026 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BB_0026 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BB_0029 PF02639 BB_0029 BB_0030 PF10502 Signal peptidase, peptidase S26 BB_0031 PF00717 Peptidase S24-like BB_0032 PF03781 Sulfatase-modifying factor enzyme 1 BB_0032 PF08308 BB_0032 BB_0033 PF01668 SmpB protein BB_0034 PF05628 BB_0034 BB_0035 PF00521 DNA gyrase/topoisomerase IV, subunit A BB_0036 PF00204 DNA gyrase B BB_0036 PF00986 DNA gyrase B subunit, carboxyl terminus BB_0036 PF01751 Toprim domain BB_0036 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0037 PF01553 Acyltransferase BB_0040 PF01739 CheR methyltransferase, SAM binding domain BB_0040 PF03705 CheR methyltransferase, all-alpha domain BB_0042 PF01895 PhoU domain BB_0045 PF02463 RecF/RecN/SMC N terminal domain BB_0046 PF01351 Ribonuclease HII BB_0047 PF11680 Protein of unknown function (DUF3276) BB_0050 PF02592 BB_0050 BB_0051 PF02592 BB_0051 BB_0052 PF00588 SpoU rRNA Methylase family BB_0053 PF03167 Uracil DNA glycosylase superfamily BB_0054 PF03840 Preprotein translocase SecG subunit BB_0055 PF00121 Triosephosphate isomerase BB_0056 PF00162 Phosphoglycerate kinase BB_0057 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BB_0057 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BB_0058 PF13432 Tetratricopeptide repeat BB_0059 PF00571 CBS domain BB_0059 PF03471 Transporter associated domain BB_0060 PF02130 Uncharacterized protein family UPF0054 BB_0061 PF00085 Thioredoxin BB_0062 PF04452 RNA methyltransferase BB_0063 PF03793 PASTA domain BB_0064 PF00551 Formyl transferase BB_0064 PF02911 Formyl transferase, C-terminal domain BB_0065 PF01327 Polypeptide deformylase BB_0067 PF00557 Metallopeptidase family M24 BB_0067 PF01321 Creatinase/Prolidase N-terminal domain BB_0067 PF16188 BB_0067 BB_0067 PF16189 BB_0067 BB_0068 PF08282 haloacid dehalogenase-like hydrolase BB_0069 PF02073 Thermophilic metalloprotease (M29) BB_0070 PF02681 BB_0070 BB_0072 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BB_0072 PF03116 BB_0072 BB_0076 PF00448 SRP54-type protein, GTPase domain BB_0076 PF02881 SRP54-type protein, helical bundle domain BB_0080 PF00005 ABC transporter BB_0081 PF02687 BB_0081 BB_0084 PF00266 Aminotransferase class-V BB_0086 PF01078 Magnesium chelatase, subunit ChlI BB_0086 PF13335 BB_0086 BB_0086 PF13541 Subunit ChlI of Mg-chelatase BB_0087 PF00056 lactate/malate dehydrogenase, NAD binding domain BB_0087 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BB_0088 PF00009 Elongation factor Tu GTP binding domain BB_0088 PF00679 Elongation factor G C-terminus BB_0088 PF03144 Elongation factor Tu domain 2 BB_0088 PF06421 GTP-binding protein LepA C-terminus BB_0088 PF14492 Elongation Factor G, domain II BB_0090 PF00137 ATP synthase subunit C BB_0092 PF01813 ATP synthase subunit D BB_0093 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB_0093 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB_0094 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB_0094 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB_0094 PF16886 BB_0094 BB_0098 PF00488 MutS domain V BB_0098 PF01713 Smr domain BB_0099 PF03193 Protein of unknown function, DUF258 BB_0100 PF01177 Asp/Glu/Hydantoin racemase BB_0101 PF00152 tRNA synthetases class II (D, K and N) BB_0101 PF01336 OB-fold nucleic acid binding domain BB_0103 PF00156 Phosphoribosyl transferase domain BB_0104 PF13180 PDZ domain BB_0104 PF13365 Trypsin-like peptidase domain BB_0105 PF00557 Metallopeptidase family M24 BB_0106 PF07719 Tetratricopeptide repeat BB_0106 PF13432 Tetratricopeptide repeat BB_0107 PF01029 NusB family BB_0108 PF00639 PPIC-type PPIASE domain BB_0108 PF13624 SurA N-terminal domain BB_0109 PF00108 Thiolase, N-terminal domain BB_0109 PF02803 Thiolase, C-terminal domain BB_0111 PF00772 DnaB-like helicase N terminal domain BB_0111 PF03796 DnaB-like helicase C terminal domain BB_0112 PF01281 Ribosomal protein L9, N-terminal domain BB_0112 PF03948 Ribosomal protein L9, C-terminal domain BB_0113 PF01084 Ribosomal protein S18 BB_0114 PF00436 Single-strand binding protein family BB_0115 PF01250 Ribosomal protein S6 BB_0116 PF00367 phosphotransferase system, EIIB BB_0116 PF02378 Phosphotransferase system, EIIC BB_0117 PF03006 BB_0117 BB_0118 PF02163 Peptidase family M50 BB_0118 PF13180 PDZ domain BB_0119 PF01148 Cytidylyltransferase family BB_0120 PF01255 Putative undecaprenyl diphosphate synthase BB_0121 PF01765 Ribosome recycling factor BB_0122 PF00889 Elongation factor TS BB_0123 PF00318 Ribosomal protein S2 BB_0127 PF00575 S1 RNA binding domain BB_0128 PF02224 Cytidylate kinase BB_0129 PF00849 RNA pseudouridylate synthase BB_0129 PF01479 S4 domain BB_0131 PF00154 recA bacterial DNA recombination protein BB_0132 PF01272 Transcription elongation factor, GreA/GreB, C-term BB_0132 PF03449 Transcription elongation factor, N-terminal BB_0135 PF03129 Anticodon binding domain BB_0135 PF13393 Histidyl-tRNA synthetase BB_0136 PF00905 Penicillin binding protein transpeptidase domain BB_0136 PF03717 Penicillin-binding Protein dimerisation domain BB_0136 PF03793 PASTA domain BB_0137 PF00501 AMP-binding enzyme BB_0141 PF13533 Biotin-lipoyl like BB_0141 PF16576 BB_0141 BB_0142 PF02321 Outer membrane efflux protein BB_0143 PF01809 BB_0143 BB_0144 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BB_0145 PF00528 Binding-protein-dependent transport system inner membrane component BB_0146 PF00005 ABC transporter BB_0147 PF00460 Flagella basal body rod protein BB_0147 PF00669 Bacterial flagellin N-terminal helical region BB_0147 PF00700 Bacterial flagellin C-terminal helical region BB_0149 PF02465 BB_0149 BB_0149 PF07195 BB_0149 BB_0151 PF01979 Amidohydrolase family BB_0152 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BB_0153 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BB_0153 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BB_0154 PF01043 SecA preprotein cross-linking domain BB_0154 PF02810 SEC-C motif BB_0154 PF07516 SecA Wing and Scaffold domain BB_0154 PF07517 SecA DEAD-like domain BB_0160 PF00842 Alanine racemase, C-terminal domain BB_0160 PF01168 Alanine racemase, N-terminal domain BB_0164 PF01699 Sodium/calcium exchanger protein BB_0165 PF13200 BB_0165 BB_0166 PF02446 4-alpha-glucanotransferase BB_0167 PF00691 OmpA family BB_0168 PF01258 Prokaryotic dksA/traR C4-type zinc finger BB_0169 PF01176 Translation initiation factor 1A / IF-1 BB_0170 PF13584 BB_0170 BB_0171 PF00515 Tetratricopeptide repeat BB_0171 PF13432 Tetratricopeptide repeat BB_0172 PF13519 von Willebrand factor type A domain BB_0173 PF00092 von Willebrand factor type A domain BB_0175 PF01882 BB_0175 BB_0176 PF07726 ATPase family associated with various cellular activities (AAA) BB_0177 PF02527 rRNA small subunit methyltransferase G BB_0178 PF01134 Glucose inhibited division protein A BB_0178 PF13932 GidA associated domain 3 BB_0179 PF01926 50S ribosome-binding GTPase BB_0179 PF10396 GTP-binding protein TrmE N-terminus BB_0179 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE BB_0181 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0181 PF07196 Flagellin hook IN motif BB_0182 PF00669 Bacterial flagellin N-terminal helical region BB_0182 PF00700 Bacterial flagellin C-terminal helical region BB_0182 PF07196 Flagellin hook IN motif BB_0183 PF02623 FliW protein BB_0184 PF02599 Global regulator protein family BB_0185 PF00814 Glycoprotease family BB_0186 PF02367 Uncharacterised P-loop hydrolase UPF0079 BB_0188 PF00453 Ribosomal protein L20 BB_0189 PF01632 Ribosomal protein L35 BB_0190 PF00707 Translation initiation factor IF-3, C-terminal domain BB_0190 PF05198 Translation initiation factor IF-3, N-terminal domain BB_0194 PF01026 TatD related DNase BB_0195 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 BB_0195 PF13174 Tetratricopeptide repeat BB_0195 PF13181 Tetratricopeptide repeat BB_0195 PF14559 Tetratricopeptide repeat BB_0196 PF00472 RF-1 domain BB_0196 PF03462 PCRF domain BB_0197 PF05175 Methyltransferase small domain BB_0198 PF02824 TGS domain BB_0198 PF04607 Region found in RelA / SpoT proteins BB_0198 PF13328 HD domain BB_0200 PF01820 D-ala D-ala ligase N-terminus BB_0200 PF07478 D-ala D-ala ligase C-terminus BB_0201 PF01225 Mur ligase family, catalytic domain BB_0201 PF02875 Mur ligase family, glutamate ligase domain BB_0201 PF08245 Mur ligase middle domain BB_0202 PF00571 CBS domain BB_0202 PF01595 BB_0202 BB_0202 PF03471 Transporter associated domain BB_0203 PF01145 SPFH domain / Band 7 family BB_0204 PF01145 SPFH domain / Band 7 family BB_0206 PF03602 Conserved hypothetical protein 95 BB_0207 PF00483 Nucleotidyl transferase BB_0209 PF13432 Tetratricopeptide repeat BB_0210 PF00515 Tetratricopeptide repeat BB_0210 PF13181 Tetratricopeptide repeat BB_0210 PF13432 Tetratricopeptide repeat BB_0210 PF14559 Tetratricopeptide repeat BB_0211 PF01119 DNA mismatch repair protein, C-terminal domain BB_0211 PF08676 MutL C terminal dimerisation domain BB_0211 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0214 PF01132 Elongation factor P (EF-P) OB domain BB_0214 PF08207 Elongation factor P (EF-P) KOW-like domain BB_0214 PF09285 Elongation factor P, C-terminal BB_0215 PF12849 PBP superfamily domain BB_0216 PF00528 Binding-protein-dependent transport system inner membrane component BB_0217 PF00528 Binding-protein-dependent transport system inner membrane component BB_0218 PF00005 ABC transporter BB_0219 PF02535 BB_0219 BB_0220 PF01411 tRNA synthetases class II (A) BB_0220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BB_0221 PF01706 FliG C-terminal domain BB_0221 PF14841 FliG middle domain BB_0221 PF14842 FliG N-terminal domain BB_0222 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BB_0225 PF01207 Dihydrouridine synthase (Dus) BB_0226 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB_0226 PF02403 Seryl-tRNA synthetase N-terminal domain BB_0228 PF00675 Insulinase (Peptidase family M16) BB_0228 PF05193 Peptidase M16 inactive domain BB_0228 PF08367 Peptidase M16C associated BB_0229 PF01197 Ribosomal protein L31 BB_0230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB_0230 PF07497 Rho termination factor, RNA-binding domain BB_0231 PF04519 BB_0231 BB_0232 PF00216 Bacterial DNA-binding protein BB_0233 PF01649 Ribosomal protein S20 BB_0235 PF01926 50S ribosome-binding GTPase BB_0235 PF06071 Protein of unknown function (DUF933) BB_0237 PF00795 Carbon-nitrogen hydrolase BB_0239 PF01712 Deoxynucleoside kinase BB_0240 PF00230 Major intrinsic protein BB_0241 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BB_0241 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BB_0243 PF01266 FAD dependent oxidoreductase BB_0243 PF16901 BB_0243 BB_0244 PF03885 Protein of unknown function (DUF327) BB_0245 PF04519 BB_0245 BB_0246 PF01551 Peptidase family M23 BB_0247 PF01725 Ham1 family BB_0248 PF01432 Peptidase family M3 BB_0248 PF08439 Oligopeptidase F BB_0249 PF01066 CDP-alcohol phosphatidyltransferase BB_0250 PF09335 BB_0250 BB_0251 PF00133 tRNA synthetases class I (I, L, M and V) BB_0251 PF08264 Anticodon-binding domain of tRNA BB_0251 PF09334 tRNA synthetases class I (M) BB_0251 PF13603 Leucyl-tRNA synthetase, Domain 2 BB_0252 PF03176 MMPL family BB_0253 PF00004 ATPase family associated with various cellular activities (AAA) BB_0253 PF02190 ATP-dependent protease La (LON) domain BB_0253 PF05362 Lon protease (S16) C-terminal proteolytic domain BB_0254 PF01368 DHH family BB_0254 PF02272 DHHA1 domain BB_0255 PF01551 Peptidase family M23 BB_0256 PF01165 Ribosomal protein S21 BB_0257 PF01580 FtsK/SpoIIIE family BB_0257 PF09397 Ftsk gamma domain BB_0258 PF02673 BB_0258 BB_0259 PF01464 Transglycosylase SLT domain BB_0261 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 BB_0262 PF01476 LysM domain BB_0262 PF01551 Peptidase family M23 BB_0263 PF00717 Peptidase S24-like BB_0264 PF00012 Hsp70 protein BB_0267 PF03961 BB_0267 BB_0267 PF14804 Jag N-terminus BB_0269 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BB_0270 PF00448 SRP54-type protein, GTPase domain BB_0271 PF00771 FHIPEP family BB_0272 PF01312 FlhB HrpN YscU SpaS Family BB_0273 PF01311 BB_0273 BB_0274 PF01313 BB_0274 BB_0275 PF00813 BB_0275 BB_0277 PF01052 Surface presentation of antigens (SPOA) BB_0278 PF01052 Surface presentation of antigens (SPOA) BB_0278 PF02154 Flagellar motor switch protein FliM BB_0279 PF03748 BB_0279 BB_0280 PF00691 OmpA family BB_0280 PF13677 BB_0280 BB_0281 PF01618 BB_0281 BB_0282 PF06289 BB_0282 BB_0283 PF00460 Flagella basal body rod protein BB_0283 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0283 PF07559 Flagellar basal body protein FlaE BB_0284 PF03963 BB_0284 BB_0285 PF02120 Flagellar hook-length control protein FliK BB_0288 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BB_0288 PF02874 ATP synthase alpha/beta family, beta-barrel domain BB_0289 PF02108 BB_0289 BB_0290 PF01706 FliG C-terminal domain BB_0290 PF14841 FliG middle domain BB_0290 PF14842 FliG N-terminal domain BB_0291 PF01514 Secretory protein of YscJ/FliF family BB_0291 PF08345 BB_0291 BB_0292 PF02049 BB_0292 BB_0293 PF00460 Flagella basal body rod protein BB_0293 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0294 PF00460 Flagella basal body rod protein BB_0295 PF07724 AAA domain (Cdc48 subfamily) BB_0295 PF10431 C-terminal, D2-small domain, of ClpB protein BB_0296 PF00227 Proteasome subunit BB_0297 PF02481 DNA recombination-mediator protein A BB_0298 PF00515 Tetratricopeptide repeat BB_0299 PF00091 Tubulin/FtsZ family, GTPase domain BB_0299 PF12327 FtsZ family, C-terminal domain BB_0300 PF02491 SHS2 domain inserted in FTSA BB_0300 PF14450 Cell division protein FtsA BB_0301 PF08478 POTRA domain, FtsQ-type BB_0302 PF01098 BB_0302 BB_0303 PF00953 Glycosyl transferase family 4 BB_0303 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BB_0304 PF01225 Mur ligase family, catalytic domain BB_0304 PF02875 Mur ligase family, glutamate ligase domain BB_0304 PF08245 Mur ligase middle domain BB_0306 PF01795 MraW methylase family BB_0311 PF01513 ATP-NAD kinase BB_0312 PF01584 CheW-like domain BB_0313 PF01728 FtsJ-like methyltransferase BB_0314 PF00348 Polyprenyl synthetase BB_0317 PF02653 BB_0317 BB_0318 PF00005 ABC transporter BB_0319 PF02608 Basic membrane protein BB_0323 PF01476 LysM domain BB_0325 PF00092 von Willebrand factor type A domain BB_0326 PF13181 Tetratricopeptide repeat BB_0327 PF01553 Acyltransferase BB_0328 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB_0329 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB_0330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BB_0332 PF00528 Binding-protein-dependent transport system inner membrane component BB_0333 PF00528 Binding-protein-dependent transport system inner membrane component BB_0333 PF12911 BB_0333 BB_0334 PF00005 ABC transporter BB_0334 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB_0335 PF00005 ABC transporter BB_0335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BB_0337 PF00113 Enolase, C-terminal TIM barrel domain BB_0337 PF03952 Enolase, N-terminal domain BB_0338 PF00380 Ribosomal protein S9/S16 BB_0339 PF00572 Ribosomal protein L13 BB_0341 PF02637 GatB domain BB_0341 PF02934 GatB/GatE catalytic domain BB_0342 PF01425 Amidase BB_0343 PF02686 Glu-tRNAGln amidotransferase C subunit BB_0344 PF00580 UvrD/REP helicase N-terminal domain BB_0344 PF13361 UvrD-like helicase C-terminal domain BB_0345 PF13413 Helix-turn-helix domain BB_0346 PF03548 Outer membrane lipoprotein carrier protein LolA BB_0347 PF05670 BB_0347 BB_0347 PF05833 Fibronectin-binding protein A N-terminus (FbpA) BB_0348 PF00224 Pyruvate kinase, barrel domain BB_0348 PF02887 Pyruvate kinase, alpha/beta domain BB_0349 PF01875 Memo-like protein BB_0350 PF00830 Ribosomal L28 family BB_0355 PF02559 CarD-like/TRCF domain BB_0358 PF04452 RNA methyltransferase BB_0359 PF03572 Peptidase family S41 BB_0359 PF13180 PDZ domain BB_0361 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BB_0362 PF01790 BB_0362 BB_0363 PF00563 EAL domain BB_0364 PF02142 MGS-like domain BB_0366 PF02127 Aminopeptidase I zinc metalloprotease (M18) BB_0368 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BB_0368 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BB_0369 PF00004 ATPase family associated with various cellular activities (AAA) BB_0369 PF07724 AAA domain (Cdc48 subfamily) BB_0370 PF00579 tRNA synthetases class I (W and Y) BB_0370 PF01479 S4 domain BB_0371 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB_0371 PF03129 Anticodon binding domain BB_0372 PF00749 tRNA synthetases class I (E and Q), catalytic domain BB_0374 PF13487 HD domain BB_0375 PF01048 Phosphorylase superfamily BB_0376 PF00438 S-adenosylmethionine synthetase, N-terminal domain BB_0376 PF02772 S-adenosylmethionine synthetase, central domain BB_0376 PF02773 S-adenosylmethionine synthetase, C-terminal domain BB_0377 PF02664 S-Ribosylhomocysteinase (LuxS) BB_0379 PF01230 HIT domain BB_0380 PF00571 CBS domain BB_0380 PF01769 Divalent cation transporter BB_0380 PF03448 MgtE intracellular N domain BB_0381 PF01204 Trehalase BB_0382 PF02608 Basic membrane protein BB_0383 PF02608 Basic membrane protein BB_0384 PF02608 Basic membrane protein BB_0385 PF02608 Basic membrane protein BB_0386 PF00177 Ribosomal protein S7p/S5e BB_0387 PF00164 Ribosomal protein S12/S23 BB_0388 PF00623 RNA polymerase Rpb1, domain 2 BB_0388 PF04983 RNA polymerase Rpb1, domain 3 BB_0388 PF04997 RNA polymerase Rpb1, domain 1 BB_0388 PF04998 RNA polymerase Rpb1, domain 5 BB_0388 PF05000 RNA polymerase Rpb1, domain 4 BB_0389 PF00562 RNA polymerase Rpb2, domain 6 BB_0389 PF04560 RNA polymerase Rpb2, domain 7 BB_0389 PF04561 RNA polymerase Rpb2, domain 2 BB_0389 PF04563 RNA polymerase beta subunit BB_0389 PF04565 RNA polymerase Rpb2, domain 3 BB_0389 PF10385 RNA polymerase beta subunit external 1 domain BB_0390 PF00542 Ribosomal protein L7/L12 C-terminal domain BB_0390 PF16320 BB_0390 BB_0391 PF00466 Ribosomal protein L10 BB_0392 PF00687 Ribosomal protein L1p/L10e family BB_0393 PF00298 Ribosomal protein L11, RNA binding domain BB_0393 PF03946 Ribosomal protein L11, N-terminal domain BB_0394 PF02357 Transcription termination factor nusG BB_0395 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BB_0396 PF00471 Ribosomal protein L33 BB_0399 PF12796 Ankyrin repeats (3 copies) BB_0401 PF00375 Sodium:dicarboxylate symporter family BB_0402 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB_0402 PF03129 Anticodon binding domain BB_0402 PF09180 Prolyl-tRNA synthetase, C-terminal BB_0403 PF10016 BB_0403 BB_0405 PF13161 BB_0405 BB_0406 PF13161 BB_0406 BB_0407 PF01238 Phosphomannose isomerase type I BB_0408 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB_0408 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB_0414 PF01739 CheR methyltransferase, SAM binding domain BB_0414 PF03705 CheR methyltransferase, all-alpha domain BB_0415 PF00072 Response regulator receiver domain BB_0415 PF01339 CheB methylesterase BB_0416 PF01963 BB_0416 BB_0417 PF00406 Adenylate kinase BB_0417 PF05191 Adenylate kinase, active site lid BB_0419 PF00072 Response regulator receiver domain BB_0419 PF00990 GGDEF domain BB_0420 PF00072 Response regulator receiver domain BB_0420 PF00497 Bacterial extracellular solute-binding proteins, family 3 BB_0420 PF00512 His Kinase A (phospho-acceptor) domain BB_0420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0421 PF08282 haloacid dehalogenase-like hydrolase BB_0422 PF02245 Methylpurine-DNA glycosylase (MPG) BB_0426 PF05014 Nucleoside 2-deoxyribosyltransferase BB_0427 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BB_0429 PF08973 Domain of unknown function (DUF1893) BB_0430 PF01205 Uncharacterized protein family UPF0029 BB_0431 PF13614 AAA domain BB_0434 PF02195 ParB-like nuclease domain BB_0435 PF00521 DNA gyrase/topoisomerase IV, subunit A BB_0435 PF03989 DNA gyrase C-terminal domain, beta-propeller BB_0436 PF00204 DNA gyrase B BB_0436 PF00986 DNA gyrase B subunit, carboxyl terminus BB_0436 PF01751 Toprim domain BB_0436 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0437 PF00308 Bacterial dnaA protein BB_0437 PF08299 Bacterial dnaA protein helix-turn-helix BB_0437 PF11638 DnaA N-terminal domain BB_0438 PF00712 DNA polymerase III beta subunit, N-terminal domain BB_0438 PF02767 DNA polymerase III beta subunit, central domain BB_0438 PF02768 DNA polymerase III beta subunit, C-terminal domain BB_0440 PF00468 Ribosomal protein L34 BB_0441 PF00825 Ribonuclease P BB_0442 PF02096 60Kd inner membrane protein BB_0443 PF01424 R3H domain BB_0443 PF13083 KH domain BB_0443 PF14804 Jag N-terminus BB_0444 PF16363 BB_0444 BB_0445 PF01116 Fructose-bisphosphate aldolase class-II BB_0446 PF00152 tRNA synthetases class II (D, K and N) BB_0446 PF01336 OB-fold nucleic acid binding domain BB_0446 PF02938 GAD domain BB_0447 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB_0447 PF00999 Sodium/hydrogen exchanger family BB_0448 PF00381 PTS HPr component phosphorylation site BB_0449 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BB_0450 PF00309 BB_0450 BB_0450 PF04552 Sigma-54, DNA binding domain BB_0450 PF04963 Sigma-54 factor, core binding domain BB_0451 PF02417 BB_0451 BB_0452 PF02417 BB_0452 BB_0453 PF00924 Mechanosensitive ion channel BB_0454 PF00534 Glycosyl transferases group 1 BB_0454 PF13439 Glycosyltransferase Family 4 BB_0457 PF01541 GIY-YIG catalytic domain BB_0457 PF08459 UvrC Helix-hairpin-helix N-terminal BB_0458 PF00041 Fibronectin type III domain BB_0459 PF13181 Tetratricopeptide repeat BB_0461 PF13177 DNA polymerase III, delta subunit BB_0462 PF02575 YbaB/EbfC DNA-binding family BB_0463 PF00334 Nucleoside diphosphate kinase BB_0466 PF00005 ABC transporter BB_0467 PF02578 Multi-copper polyphenol oxidoreductase laccase BB_0468 PF01784 NIF3 (NGG1p interacting factor 3) BB_0469 PF01252 BB_0469 BB_0471 PF13277 YmdB-like protein BB_0472 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BB_0473 PF01554 MatE BB_0476 PF00009 Elongation factor Tu GTP binding domain BB_0476 PF03143 Elongation factor Tu C-terminal domain BB_0476 PF03144 Elongation factor Tu domain 2 BB_0477 PF00338 Ribosomal protein S10p/S20e BB_0478 PF00297 Ribosomal protein L3 BB_0479 PF00573 Ribosomal protein L4/L1 family BB_0480 PF00276 Ribosomal protein L23 BB_0481 PF00181 Ribosomal Proteins L2, RNA binding domain BB_0481 PF03947 Ribosomal Proteins L2, C-terminal domain BB_0482 PF00203 Ribosomal protein S19 BB_0483 PF00237 Ribosomal protein L22p/L17e BB_0484 PF00189 Ribosomal protein S3, C-terminal domain BB_0484 PF07650 KH domain BB_0485 PF00252 Ribosomal protein L16p/L10e BB_0486 PF00831 Ribosomal L29 protein BB_0487 PF00366 Ribosomal protein S17 BB_0488 PF00238 Ribosomal protein L14p/L23e BB_0489 PF00467 KOW motif BB_0489 PF17136 BB_0489 BB_0490 PF00281 Ribosomal protein L5 BB_0490 PF00673 ribosomal L5P family C-terminus BB_0491 PF00253 Ribosomal protein S14p/S29e BB_0492 PF00410 Ribosomal protein S8 BB_0493 PF00347 Ribosomal protein L6 BB_0494 PF00861 Ribosomal L18p/L5e family BB_0495 PF00333 Ribosomal protein S5, N-terminal domain BB_0495 PF03719 Ribosomal protein S5, C-terminal domain BB_0496 PF00327 Ribosomal protein L30p/L7e BB_0497 PF00828 Ribosomal protein L18e/L15 BB_0498 PF00344 SecY translocase BB_0499 PF00444 Ribosomal protein L36 BB_0500 PF00416 Ribosomal protein S13/S18 BB_0501 PF00411 Ribosomal protein S11 BB_0502 PF01000 RNA polymerase Rpb3/RpoA insert domain BB_0502 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BB_0502 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BB_0503 PF01196 Ribosomal protein L17 BB_0504 PF00013 KH domain BB_0504 PF01966 HD domain BB_0504 PF12072 BB_0504 BB_0505 PF13277 YmdB-like protein BB_0506 PF01728 FtsJ-like methyltransferase BB_0507 PF10646 BB_0507 BB_0508 PF01926 50S ribosome-binding GTPase BB_0508 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BB_0512 PF01442 Apolipoprotein A1/A4/E domain BB_0513 PF01409 tRNA synthetases class II core domain (F) BB_0514 PF01409 tRNA synthetases class II core domain (F) BB_0514 PF03484 tRNA synthetase B5 domain BB_0515 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB_0517 PF00226 DnaJ domain BB_0517 PF00684 DnaJ central domain BB_0517 PF01556 DnaJ C terminal domain BB_0518 PF00012 Hsp70 protein BB_0519 PF01025 GrpE BB_0524 PF00459 Inositol monophosphatase family BB_0527 PF03309 Type III pantothenate kinase BB_0528 PF00248 Aldo/keto reductase family BB_0531 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BB_0533 PF12706 Beta-lactamase superfamily domain BB_0534 PF03372 Endonuclease/Exonuclease/phosphatase family BB_0536 PF00675 Insulinase (Peptidase family M16) BB_0536 PF05193 Peptidase M16 inactive domain BB_0537 PF13424 Tetratricopeptide repeat BB_0538 PF04519 BB_0538 BB_0539 PF01027 Inhibitor of apoptosis-promoting Bax1 BB_0540 PF00009 Elongation factor Tu GTP binding domain BB_0540 PF00679 Elongation factor G C-terminus BB_0540 PF03144 Elongation factor Tu domain 2 BB_0540 PF03764 Elongation factor G, domain IV BB_0540 PF14492 Elongation Factor G, domain II BB_0542 PF13181 Tetratricopeptide repeat BB_0544 PF00156 Phosphoribosyl transferase domain BB_0544 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BB_0545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BB_0545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BB_0546 PF05036 Sporulation related domain BB_0547 PF01121 Dephospho-CoA kinase BB_0548 PF00476 DNA polymerase family A BB_0548 PF01367 5'-3' exonuclease, C-terminal SAM fold BB_0548 PF01612 3'-5' exonuclease BB_0548 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BB_0550 PF02561 Flagellar protein FliS BB_0551 PF00072 Response regulator receiver domain BB_0552 PF00533 BRCA1 C Terminus (BRCT) domain BB_0552 PF01653 NAD-dependent DNA ligase adenylation domain BB_0552 PF03120 NAD-dependent DNA ligase OB-fold domain BB_0557 PF00381 PTS HPr component phosphorylation site BB_0558 PF00391 PEP-utilising enzyme, mobile domain BB_0558 PF02896 PEP-utilising enzyme, TIM barrel domain BB_0558 PF05524 PEP-utilising enzyme, N-terminal BB_0559 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BB_0560 PF00183 Hsp90 protein BB_0560 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0561 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BB_0561 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BB_0562 PF13161 BB_0562 BB_0563 PF13161 BB_0563 BB_0564 PF13161 BB_0564 BB_0565 PF01584 CheW-like domain BB_0566 PF01740 STAS domain BB_0567 PF01584 CheW-like domain BB_0567 PF01627 Hpt domain BB_0567 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0567 PF02895 Signal transducing histidine kinase, homodimeric domain BB_0568 PF01339 CheB methylesterase BB_0570 PF00072 Response regulator receiver domain BB_0571 PF00696 Amino acid kinase family BB_0572 PF00535 Glycosyl transferase family 2 BB_0573 PF00005 ABC transporter BB_0575 PF00117 Glutamine amidotransferase class-I BB_0575 PF06418 CTP synthase N-terminus BB_0576 PF08570 BB_0576 BB_0578 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0579 PF01336 OB-fold nucleic acid binding domain BB_0579 PF02811 PHP domain BB_0579 PF07733 Bacterial DNA polymerase III alpha subunit BB_0579 PF14579 Helix-hairpin-helix motif BB_0580 PF02325 BB_0580 BB_0581 PF00270 DEAD/DEAH box helicase BB_0581 PF00271 Helicase conserved C-terminal domain BB_0581 PF17191 BB_0581 BB_0582 PF02557 D-alanyl-D-alanine carboxypeptidase BB_0583 PF01554 MatE BB_0584 PF01554 MatE BB_0585 PF08245 Mur ligase middle domain BB_0586 PF02388 FemAB family BB_0587 PF01588 Putative tRNA binding domain BB_0587 PF08264 Anticodon-binding domain of tRNA BB_0587 PF09334 tRNA synthetases class I (M) BB_0588 PF01048 Phosphorylase superfamily BB_0589 PF01515 Phosphate acetyl/butaryl transferase BB_0590 PF00398 Ribosomal RNA adenine dimethylase BB_0591 PF03772 BB_0591 BB_0592 PF02517 CAAX protease self-immunity BB_0593 PF00501 AMP-binding enzyme BB_0594 PF00750 tRNA synthetases class I (R) BB_0594 PF03485 Arginyl tRNA synthetase N terminal domain BB_0594 PF05746 DALR anticodon binding domain BB_0596 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0597 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0598 PF01565 FAD binding domain BB_0598 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BB_0599 PF01406 tRNA synthetases class I (C) catalytic domain BB_0601 PF00464 Serine hydroxymethyltransferase BB_0602 PF00226 DnaJ domain BB_0603 PF11263 BB_0603 BB_0604 PF02652 BB_0604 BB_0605 PF00768 D-alanyl-D-alanine carboxypeptidase BB_0605 PF07943 Penicillin-binding protein 5, C-terminal domain BB_0606 PF03975 CheD chemotactic sensory transduction BB_0607 PF00580 UvrD/REP helicase N-terminal domain BB_0607 PF13361 UvrD-like helicase C-terminal domain BB_0608 PF01546 Peptidase family M20/M25/M40 BB_0608 PF07687 Peptidase dimerisation domain BB_0610 PF05697 Bacterial trigger factor protein (TF) BB_0610 PF05698 Bacterial trigger factor protein (TF) C-terminus BB_0611 PF00574 Clp protease BB_0612 PF06689 ClpX C4-type zinc finger BB_0612 PF07724 AAA domain (Cdc48 subfamily) BB_0612 PF10431 C-terminal, D2-small domain, of ClpB protein BB_0613 PF00004 ATPase family associated with various cellular activities (AAA) BB_0613 PF02190 ATP-dependent protease La (LON) domain BB_0613 PF05362 Lon protease (S16) C-terminal proteolytic domain BB_0615 PF00163 Ribosomal protein S4/S9 N-terminal domain BB_0615 PF01479 S4 domain BB_0616 PF01545 Cation efflux family BB_0618 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BB_0619 PF01368 DHH family BB_0619 PF02272 DHHA1 domain BB_0620 PF00933 Glycosyl hydrolase family 3 N terminal domain BB_0621 PF01965 DJ-1/PfpI family BB_0622 PF00871 Acetokinase family BB_0623 PF00270 DEAD/DEAH box helicase BB_0623 PF00271 Helicase conserved C-terminal domain BB_0623 PF02559 CarD-like/TRCF domain BB_0623 PF03461 TRCF domain BB_0625 PF01476 LysM domain BB_0625 PF01520 N-acetylmuramoyl-L-alanine amidase BB_0626 PF01751 Toprim domain BB_0626 PF13331 BB_0626 BB_0627 PF02127 Aminopeptidase I zinc metalloprotease (M18) BB_0629 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BB_0629 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BB_0630 PF00294 pfkB family carbohydrate kinase BB_0632 PF13538 UvrD-like helicase C-terminal domain BB_0632 PF13604 AAA domain BB_0633 PF00580 UvrD/REP helicase N-terminal domain BB_0633 PF12705 PD-(D/E)XK nuclease superfamily BB_0633 PF13361 UvrD-like helicase C-terminal domain BB_0635 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BB_0636 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BB_0636 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BB_0637 PF03553 BB_0637 BB_0638 PF03553 BB_0638 BB_0639 PF13416 Bacterial extracellular solute-binding protein BB_0640 PF00528 Binding-protein-dependent transport system inner membrane component BB_0641 PF00528 Binding-protein-dependent transport system inner membrane component BB_0642 PF00005 ABC transporter BB_0642 PF08402 TOBE domain BB_0643 PF01926 50S ribosome-binding GTPase BB_0644 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BB_0645 PF00367 phosphotransferase system, EIIB BB_0645 PF02378 Phosphotransferase system, EIIC BB_0646 PF12146 Putative lysophospholipase BB_0647 PF01475 Ferric uptake regulator family BB_0649 PF00118 TCP-1/cpn60 chaperonin family BB_0651 PF02699 Preprotein translocase subunit BB_0652 PF02355 Protein export membrane protein BB_0653 PF02355 Protein export membrane protein BB_0655 PF00226 DnaJ domain BB_0655 PF01556 DnaJ C terminal domain BB_0657 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BB_0658 PF00300 Histidine phosphatase superfamily (branch 1) BB_0659 PF01921 tRNA synthetases class I (K) BB_0660 PF01926 50S ribosome-binding GTPase BB_0660 PF07650 KH domain BB_0663 PF02643 Uncharacterized ACR, COG1430 BB_0666 PF01520 N-acetylmuramoyl-L-alanine amidase BB_0667 PF10646 BB_0667 BB_0668 PF04620 BB_0668 BB_0669 PF01584 CheW-like domain BB_0669 PF01627 Hpt domain BB_0669 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0669 PF02895 Signal transducing histidine kinase, homodimeric domain BB_0669 PF07194 P2 response regulator binding domain BB_0670 PF01584 CheW-like domain BB_0670 PF01739 CheR methyltransferase, SAM binding domain BB_0671 PF13690 Chemotaxis phosphatase CheX BB_0672 PF00072 Response regulator receiver domain BB_0676 PF13419 Haloacid dehalogenase-like hydrolase BB_0677 PF00005 ABC transporter BB_0678 PF02653 BB_0678 BB_0679 PF02653 BB_0679 BB_0680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0681 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BB_0682 PF03054 tRNA methyl transferase BB_0683 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BB_0683 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BB_0684 PF01070 FMN-dependent dehydrogenase BB_0685 PF00368 Hydroxymethylglutaryl-coenzyme A reductase BB_0686 PF00288 GHMP kinases N terminal domain BB_0687 PF00288 GHMP kinases N terminal domain BB_0688 PF00288 GHMP kinases N terminal domain BB_0688 PF08544 GHMP kinases C terminal BB_0689 PF00188 Cysteine-rich secretory protein family BB_0690 PF00210 Ferritin-like domain BB_0691 PF00009 Elongation factor Tu GTP binding domain BB_0691 PF00679 Elongation factor G C-terminus BB_0691 PF03144 Elongation factor Tu domain 2 BB_0691 PF03764 Elongation factor G, domain IV BB_0691 PF14492 Elongation Factor G, domain II BB_0693 PF00480 ROK family BB_0694 PF00448 SRP54-type protein, GTPase domain BB_0694 PF02881 SRP54-type protein, helical bundle domain BB_0694 PF02978 Signal peptide binding domain BB_0695 PF00886 Ribosomal protein S16 BB_0696 PF13083 KH domain BB_0697 PF01782 RimM N-terminal domain BB_0698 PF01746 tRNA (Guanine-1)-methyltransferase BB_0699 PF01245 Ribosomal protein L19 BB_0702 PF01467 Cytidylyltransferase BB_0703 PF01783 Ribosomal L32p protein family BB_0704 PF00550 Phosphopantetheine attachment site BB_0705 PF00035 Double-stranded RNA binding motif BB_0705 PF14622 Ribonuclease-III-like BB_0706 PF01743 Poly A polymerase head domain BB_0706 PF12627 Probable RNA and SrmB- binding site of polymerase A BB_0709 PF02618 YceG-like family BB_0712 PF00140 Sigma-70 factor, region 1 BB_0712 PF03979 Sigma-70 factor, region 1 BB_0712 PF04539 Sigma-70 region 3 BB_0712 PF04542 Sigma-70 region 2 BB_0712 PF04545 Sigma-70, region 4 BB_0713 PF02591 Putative zinc ribbon domain BB_0714 PF13414 TPR repeat BB_0715 PF06723 MreB/Mbl protein BB_0716 PF04085 rod shape-determining protein MreC BB_0718 PF00905 Penicillin binding protein transpeptidase domain BB_0718 PF03717 Penicillin-binding Protein dimerisation domain BB_0719 PF01098 BB_0719 BB_0720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BB_0720 PF03129 Anticodon binding domain BB_0720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BB_0721 PF01066 CDP-alcohol phosphatidyltransferase BB_0724 PF02386 Cation transport protein BB_0725 PF02080 TrkA-C domain BB_0725 PF02254 TrkA-N domain BB_0726 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BB_0727 PF00365 Phosphofructokinase BB_0728 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BB_0728 PF07992 Pyridine nucleotide-disulphide oxidoreductase BB_0729 PF00375 Sodium:dicarboxylate symporter family BB_0730 PF00342 Phosphoglucose isomerase BB_0731 PF02195 ParB-like nuclease domain BB_0732 PF00905 Penicillin binding protein transpeptidase domain BB_0732 PF00912 Transglycosylase BB_0734 PF01300 Telomere recombination BB_0734 PF03481 Putative GTP-binding controlling metal-binding BB_0735 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel BB_0735 PF05036 Sporulation related domain BB_0737 PF01207 Dihydrouridine synthase (Dus) BB_0738 PF00133 tRNA synthetases class I (I, L, M and V) BB_0738 PF08264 Anticodon-binding domain of tRNA BB_0738 PF10458 Valyl tRNA synthetase tRNA binding arm BB_0740 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BB_0741 PF00166 Chaperonin 10 Kd subunit BB_0742 PF00005 ABC transporter BB_0742 PF12848 ABC transporter BB_0744 PF05262 BB_0744 BB_0745 PF00633 Helix-hairpin-helix motif BB_0745 PF00730 HhH-GPD superfamily base excision DNA repair protein BB_0746 PF00528 Binding-protein-dependent transport system inner membrane component BB_0747 PF00528 Binding-protein-dependent transport system inner membrane component BB_0748 PF04977 Septum formation initiator BB_0751 PF14238 BB_0751 BB_0752 PF09822 BB_0752 BB_0753 PF12679 BB_0753 BB_0754 PF00005 ABC transporter BB_0755 PF00753 Metallo-beta-lactamase superfamily BB_0755 PF12706 Beta-lactamase superfamily domain BB_0756 PF01266 FAD dependent oxidoreductase BB_0757 PF00574 Clp protease BB_0759 PF04018 BB_0759 BB_0760 PF03819 MazG nucleotide pyrophosphohydrolase domain BB_0761 PF01476 LysM domain BB_0761 PF01551 Peptidase family M23 BB_0763 PF00072 Response regulator receiver domain BB_0763 PF00158 Sigma-54 interaction domain BB_0763 PF02954 Bacterial regulatory protein, Fis family BB_0764 PF00512 His Kinase A (phospho-acceptor) domain BB_0764 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BB_0765 PF13177 DNA polymerase III, delta subunit BB_0766 PF02674 BB_0766 BB_0767 PF03033 Glycosyltransferase family 28 N-terminal domain BB_0767 PF04101 Glycosyltransferase family 28 C-terminal domain BB_0768 PF08543 Phosphomethylpyrimidine kinase BB_0769 PF00814 Glycoprotease family BB_0770 PF04748 Divergent polysaccharide deacetylase BB_0771 PF00140 Sigma-70 factor, region 1 BB_0771 PF04542 Sigma-70 region 2 BB_0771 PF04545 Sigma-70, region 4 BB_0771a PF10135 BB_0771a BB_0772 PF02119 BB_0772 BB_0773 PF13144 SAF-like BB_0774 PF00460 Flagella basal body rod protein BB_0774 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0775 PF00460 Flagella basal body rod protein BB_0775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BB_0776 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) BB_0777 PF00156 Phosphoribosyl transferase domain BB_0778 PF00829 Ribosomal prokaryotic L21 protein BB_0779 PF04327 Protein of unknown function (DUF464) BB_0780 PF01016 Ribosomal L27 protein BB_0781 PF01018 GTP1/OBG BB_0781 PF01926 50S ribosome-binding GTPase BB_0782 PF01467 Cytidylyltransferase BB_0783 PF03816 Cell envelope-related transcriptional attenuator domain BB_0783 PF13399 LytR cell envelope-related transcriptional attenuator BB_0784 PF02410 Oligomerisation domain BB_0785 PF04026 SpoVG BB_0786 PF01386 Ribosomal L25p family BB_0786 PF14693 Ribosomal protein TL5, C-terminal domain BB_0787 PF01195 Peptidyl-tRNA hydrolase BB_0788 PF01171 PP-loop family BB_0789 PF00004 ATPase family associated with various cellular activities (AAA) BB_0789 PF01434 Peptidase family M41 BB_0789 PF06480 FtsH Extracellular BB_0791 PF00265 Thymidine kinase BB_0793 PF02223 Thymidylate kinase BB_0795 PF01103 Surface antigen BB_0795 PF07244 Surface antigen variable number repeat BB_0796 PF03938 Outer membrane protein (OmpH-like) BB_0797 PF00488 MutS domain V BB_0797 PF01624 MutS domain I BB_0797 PF05188 MutS domain II BB_0797 PF05190 MutS family domain IV BB_0797 PF05192 MutS domain III BB_0799 PF02576 Uncharacterised BCR, YhbC family COG0779 BB_0800 PF00575 S1 RNA binding domain BB_0800 PF08529 NusA N-terminal domain BB_0800 PF13184 NusA-like KH domain BB_0801 PF00009 Elongation factor Tu GTP binding domain BB_0801 PF04760 Translation initiation factor IF-2, N-terminal region BB_0801 PF11987 Translation-initiation factor 2 BB_0802 PF02033 Ribosome-binding factor A BB_0803 PF01509 TruB family pseudouridylate synthase (N terminal domain) BB_0804 PF00312 Ribosomal protein S15 BB_0805 PF00013 KH domain BB_0805 PF00575 S1 RNA binding domain BB_0805 PF01138 3' exoribonuclease family, domain 1 BB_0805 PF03725 3' exoribonuclease family, domain 2 BB_0805 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BB_0807 PF03739 BB_0807 BB_0808 PF03739 BB_0808 BB_0809 PF01702 Queuine tRNA-ribosyltransferase BB_0810 PF03023 BB_0810 BB_0811 PF13646 HEAT repeats BB_0812 PF02441 Flavoprotein BB_0812 PF04127 DNA / pantothenate metabolism flavoprotein BB_0814 PF00474 Sodium:solute symporter family BB_0817 PF01225 Mur ligase family, catalytic domain BB_0817 PF02875 Mur ligase family, glutamate ligase domain BB_0817 PF08245 Mur ligase middle domain BB_0818 PF03755 BB_0818 BB_0818 PF08340 BB_0818 BB_0819 PF13189 Cytidylate kinase-like family BB_0821 PF01715 IPP transferase BB_0825 PF09992 Predicted periplasmic protein (DUF2233) BB_0827 PF00270 DEAD/DEAH box helicase BB_0827 PF00271 Helicase conserved C-terminal domain BB_0827 PF04408 Helicase associated domain (HA2) BB_0827 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BB_0828 PF01131 DNA topoisomerase BB_0828 PF01751 Toprim domain BB_0828 PF13368 BB_0828 BB_0829 PF00149 Calcineurin-like phosphoesterase BB_0830 PF13555 P-loop containing region of AAA domain BB_0830 PF13558 Putative exonuclease SbcCD, C subunit BB_0831 PF00480 ROK family BB_0833 PF00133 tRNA synthetases class I (I, L, M and V) BB_0833 PF08264 Anticodon-binding domain of tRNA BB_0834 PF00004 ATPase family associated with various cellular activities (AAA) BB_0834 PF07724 AAA domain (Cdc48 subfamily) BB_0834 PF10431 C-terminal, D2-small domain, of ClpB protein BB_0835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BB_0835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB_0835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BB_0835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB_0836 PF00271 Helicase conserved C-terminal domain BB_0836 PF02151 UvrB/uvrC motif BB_0836 PF04851 Type III restriction enzyme, res subunit BB_0836 PF12344 Ultra-violet resistance protein B BB_0837 PF00005 ABC transporter BB_0839 PF01693 Caulimovirus viroplasmin BB_0841 PF02274 Amidinotransferase BB_0842 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BB_0842 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BB_0843 PF03606 BB_0843 BB_0852 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BB_A04 PF01704 UTP--glucose-1-phosphate uridylyltransferase BB_A19 PF04851 Type III restriction enzyme, res subunit BB_F17 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_F30 PF00849 RNA pseudouridylate synthase BB_G23 PF00365 Phosphofructokinase BB_I08a PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB_I22 PF00270 DEAD/DEAH box helicase BB_K15 PF07949 YbbR-like protein BB_K52 PF00204 DNA gyrase B BB_L14 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_L20 PF04851 Type III restriction enzyme, res subunit BB_L21 PF00271 Helicase conserved C-terminal domain BB_M26 PF02588 BB_M26 BB_N14 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_N26 PF02588 BB_N26 BB_O06 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BB_O26 PF02588 BB_O26 BB_P14 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_P20 PF04851 Type III restriction enzyme, res subunit BB_P21 PF00271 Helicase conserved C-terminal domain BB_Q06 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BB_Q89 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BB_S14 PF02457 DisA bacterial checkpoint controller nucleotide-binding BB_S20 PF04851 Type III restriction enzyme, res subunit BB_S21 PF00271 Helicase conserved C-terminal domain BB_T07 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III