BDU_RS00105	SM00487	DEAD-like helicases superfamily
BDU_RS00105	SM00490	helicase superfamily c-terminal domain
BDU_RS00115	SM00450	Rhodanese Homology Domain
BDU_RS00145	SM00382	ATPases associated with a variety of cellular activities
BDU_RS00150	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BDU_RS00205	SM00434	DNA Topoisomerase IV
BDU_RS00210	SM00387	Histidine kinase-like ATPases
BDU_RS00210	SM00433	TopoisomeraseII
BDU_RS00215	SM00563	Phosphate acyltransferases
BDU_RS00230	SM00138	Methyltransferase, chemotaxis proteins 
BDU_RS00260	SM00712	DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria.
BDU_RS00280	SM00986	Uracil DNA glycosylase superfamily
BDU_RS00280	SM00987	UreE urease accessory protein, C-terminal domain 
BDU_RS00300	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BDU_RS00305	SM00028	Tetratricopeptide repeats
BDU_RS00310	SM01091	Transporter associated domain
BDU_RS00330	SM00740	BDU_RS00330
BDU_RS00385	SM00937	BDU_RS00385
BDU_RS00395	SM00382	ATPases associated with a variety of cellular activities
BDU_RS00395	SM00962	SRP54-type protein, GTPase domain
BDU_RS00410	SM00382	ATPases associated with a variety of cellular activities
BDU_RS00440	SM00382	ATPases associated with a variety of cellular activities
BDU_RS00450	SM00838	Elongation factor G C-terminus
BDU_RS00500	SM00463	Small MutS-related domain
BDU_RS00500	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BDU_RS00500	SM00534	ATPase domain of DNA mismatch repair MUTS family
BDU_RS00530	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BDU_RS00540	SM00028	Tetratricopeptide repeats
BDU_RS00600	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BDU_RS00650	SM00316	Ribosomal protein S1-like RNA-binding domain
BDU_RS00660	SM00363	S4 RNA-binding domain
BDU_RS00670	SM00382	ATPases associated with a variety of cellular activities
BDU_RS00695	SM00740	BDU_RS00695
BDU_RS00740	SM00382	ATPases associated with a variety of cellular activities
BDU_RS00770	SM00957	SecA DEAD-like domain
BDU_RS00770	SM00958	SecA preprotein cross-linking domain
BDU_RS00790	SM01005	Alanine racemase, C-terminal domain
BDU_RS00830	SM00316	Ribosomal protein S1-like RNA-binding domain
BDU_RS00835	SM00287	Bacterial SH3 domain homologues
BDU_RS00840	SM00028	Tetratricopeptide repeats
BDU_RS00845	SM00327	von Willebrand factor (vWF) type A domain
BDU_RS00850	SM00327	von Willebrand factor (vWF) type A domain
BDU_RS00875	SM01228	BDU_RS00875
BDU_RS00950	SM00028	Tetratricopeptide repeats
BDU_RS00955	SM00937	BDU_RS00955
BDU_RS00965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BDU_RS00965	SM00954	Region found in RelA / SpoT proteins
BDU_RS00990	SM00116	Domain in cystathionine beta-synthase and other proteins.
BDU_RS00990	SM01091	Transporter associated domain
BDU_RS00995	SM00244	prohibitin homologues
BDU_RS01000	SM00244	prohibitin homologues
BDU_RS01035	SM00028	Tetratricopeptide repeats
BDU_RS01040	SM00028	Tetratricopeptide repeats
BDU_RS01040	SM00671	Sel1-like repeats.
BDU_RS01045	SM00853	MutL C terminal dimerisation domain
BDU_RS01045	SM01340	BDU_RS01045
BDU_RS01065	SM00841	Elongation factor P, C-terminal
BDU_RS01065	SM01185	BDU_RS01065
BDU_RS01085	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01095	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BDU_RS01130	SM01264	BDU_RS01130
BDU_RS01140	SM00357	Cold shock protein domain
BDU_RS01140	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01150	SM00411	bacterial (prokaryotic) histone like domain
BDU_RS01270	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01270	SM00464	Found in ATP-dependent protease La (LON)
BDU_RS01295	SM00843	BDU_RS01295
BDU_RS01315	SM00028	Tetratricopeptide repeats
BDU_RS01320	SM00257	Lysin motif
BDU_RS01345	SM01245	BDU_RS01345
BDU_RS01360	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01360	SM00962	SRP54-type protein, GTPase domain
BDU_RS01450	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01485	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01485	SM01086	C-terminal, D2-small domain, of ClpB protein
BDU_RS01500	SM00028	Tetratricopeptide repeats
BDU_RS01505	SM00864	Tubulin/FtsZ family, GTPase domain
BDU_RS01505	SM00865	Tubulin/FtsZ family, C-terminal domain
BDU_RS01510	SM00842	Cell division protein FtsA
BDU_RS01570	SM00260	Two component signalling adaptor domain
BDU_RS01630	SM00028	Tetratricopeptide repeats
BDU_RS01635	SM00563	Phosphate acyltransferases
BDU_RS01660	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01665	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01675	SM01192	BDU_RS01675
BDU_RS01675	SM01193	BDU_RS01675
BDU_RS01695	SM00845	GatB domain
BDU_RS01760	SM01058	CarD-like/TRCF domain
BDU_RS01775	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BDU_RS01775	SM00245	tail specific protease
BDU_RS01790	SM00052	Putative diguanylate phosphodiesterase
BDU_RS01810	SM00382	ATPases associated with a variety of cellular activities
BDU_RS01810	SM01086	C-terminal, D2-small domain, of ClpB protein
BDU_RS01815	SM00363	S4 RNA-binding domain
BDU_RS01835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BDU_RS01860	SM00116	Domain in cystathionine beta-synthase and other proteins.
BDU_RS01860	SM00924	MgtE intracellular N domain
BDU_RS01900	SM00663	RNA polymerase I subunit A N-terminus
BDU_RS01925	SM00649	Ribosomal protein L11/L12
BDU_RS01930	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BDU_RS01930	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BDU_RS01970	SM00248	ankyrin repeats
BDU_RS01980	SM00946	Prolyl-tRNA synthetase, C-terminal
BDU_RS02010	SM00477	DNA/RNA non-specific endonuclease
BDU_RS02010	SM00892	DNA/RNA non-specific endonuclease
BDU_RS02025	SM00138	Methyltransferase, chemotaxis proteins 
BDU_RS02030	SM00448	cheY-homologous receiver domain
BDU_RS02050	SM00267	diguanylate cyclase
BDU_RS02050	SM00448	cheY-homologous receiver domain
BDU_RS02055	SM00387	Histidine kinase-like ATPases
BDU_RS02055	SM00388	His Kinase A (phosphoacceptor) domain
BDU_RS02055	SM00448	cheY-homologous receiver domain
BDU_RS02080	SM00788	Adenylosuccinate synthetase
BDU_RS02085	SM00998	Adenylosuccinate lyase C-terminus
BDU_RS02140	SM00470	ParB-like nuclease domain
BDU_RS02145	SM00434	DNA Topoisomerase IV
BDU_RS02150	SM00387	Histidine kinase-like ATPases
BDU_RS02150	SM00433	TopoisomeraseII
BDU_RS02155	SM00382	ATPases associated with a variety of cellular activities
BDU_RS02155	SM00760	Bacterial dnaA protein helix-turn-helix domain
BDU_RS02160	SM00480	DNA polymerase III beta subunit
BDU_RS02190	SM00393	Putative single-stranded nucleic acids-binding domain
BDU_RS02190	SM01245	BDU_RS02190
BDU_RS02260	SM00465	GIY-YIG type nucleases (URI domain)
BDU_RS02270	SM00028	Tetratricopeptide repeats
BDU_RS02300	SM00382	ATPases associated with a variety of cellular activities
BDU_RS02310	SM00493	BDU_RS02310
BDU_RS02315	SM00562	BDU_RS02315
BDU_RS02335	SM00382	ATPases associated with a variety of cellular activities
BDU_RS02385	SM01403	BDU_RS02385
BDU_RS02405	SM01382	BDU_RS02405
BDU_RS02405	SM01383	BDU_RS02405
BDU_RS02420	SM00322	K homology RNA-binding domain
BDU_RS02440	SM01374	BDU_RS02440
BDU_RS02445	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BDU_RS02510	SM00662	RNA polymerases D
BDU_RS02520	SM00322	K homology RNA-binding domain
BDU_RS02520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BDU_RS02535	SM00909	Sporulation and spore germination
BDU_RS02565	SM00874	tRNA synthetase B5 domain
BDU_RS02580	SM00271	DnaJ molecular chaperone homology domain
BDU_RS02600	SM00331	Sigma factor PP2C-like phosphatases
BDU_RS02635	SM00849	Metallo-beta-lactamase superfamily
BDU_RS02675	SM00028	Tetratricopeptide repeats
BDU_RS02690	SM00838	Elongation factor G C-terminus
BDU_RS02690	SM00889	Elongation factor G, domain IV
BDU_RS02705	SM00028	Tetratricopeptide repeats
BDU_RS02715	SM01400	BDU_RS02715
BDU_RS02735	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BDU_RS02735	SM00474	3'-5' exonuclease
BDU_RS02735	SM00475	5'-3' exonuclease
BDU_RS02735	SM00482	DNA polymerase A domain
BDU_RS02750	SM00448	cheY-homologous receiver domain
BDU_RS02755	SM00292	breast cancer carboxy-terminal domain
BDU_RS02755	SM00532	Ligase N family
BDU_RS02795	SM00387	Histidine kinase-like ATPases
BDU_RS02800	SM01350	BDU_RS02800
BDU_RS02820	SM00260	Two component signalling adaptor domain
BDU_RS02830	SM00073	Histidine Phosphotransfer domain
BDU_RS02830	SM00260	Two component signalling adaptor domain
BDU_RS02830	SM00387	Histidine kinase-like ATPases
BDU_RS02830	SM01231	BDU_RS02830
BDU_RS02845	SM00448	cheY-homologous receiver domain
BDU_RS02870	SM00382	ATPases associated with a variety of cellular activities
BDU_RS02895	SM00481	DNA polymerase alpha chain like domain
BDU_RS02905	SM00487	DEAD-like helicases superfamily
BDU_RS02905	SM00490	helicase superfamily c-terminal domain
BDU_RS02940	SM00650	Ribosomal RNA adenine dimethylases
BDU_RS02960	SM00836	DALR anticodon binding domain
BDU_RS02960	SM01016	Arginyl tRNA synthetase N terminal dom
BDU_RS02970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BDU_RS02975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BDU_RS03000	SM00271	DnaJ molecular chaperone homology domain
BDU_RS03060	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03060	SM00994	ClpX C4-type zinc finger
BDU_RS03060	SM01086	C-terminal, D2-small domain, of ClpB protein
BDU_RS03065	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03065	SM00464	Found in ATP-dependent protease La (LON)
BDU_RS03070	SM00363	S4 RNA-binding domain
BDU_RS03070	SM01390	BDU_RS03070
BDU_RS03120	SM00487	DEAD-like helicases superfamily
BDU_RS03120	SM00490	helicase superfamily c-terminal domain
BDU_RS03120	SM00982	BDU_RS03120
BDU_RS03120	SM01058	CarD-like/TRCF domain
BDU_RS03130	SM00257	Lysin motif
BDU_RS03165	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03210	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03255	SM01323	BDU_RS03255
BDU_RS03275	SM00271	DnaJ molecular chaperone homology domain
BDU_RS03290	SM00855	Phosphoglycerate mutase family
BDU_RS03300	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03330	SM00646	BDU_RS03330
BDU_RS03345	SM00073	Histidine Phosphotransfer domain
BDU_RS03345	SM00260	Two component signalling adaptor domain
BDU_RS03345	SM00387	Histidine kinase-like ATPases
BDU_RS03345	SM01231	BDU_RS03345
BDU_RS03350	SM00260	Two component signalling adaptor domain
BDU_RS03360	SM00448	cheY-homologous receiver domain
BDU_RS03385	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BDU_RS03405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BDU_RS03460	SM00838	Elongation factor G C-terminus
BDU_RS03460	SM00889	Elongation factor G, domain IV
BDU_RS03470	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03470	SM00962	SRP54-type protein, GTPase domain
BDU_RS03470	SM00963	SRP54-type protein, helical bundle domain
BDU_RS03520	SM00358	Double-stranded RNA binding motif
BDU_RS03520	SM00535	Ribonuclease III family
BDU_RS03555	SM00400	zinc finger
BDU_RS03555	SM00493	BDU_RS03555
BDU_RS03570	SM00028	Tetratricopeptide repeats
BDU_RS03600	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BDU_RS03655	SM00470	ParB-like nuclease domain
BDU_RS03670	SM00028	Tetratricopeptide repeats
BDU_RS03685	SM00487	DEAD-like helicases superfamily
BDU_RS03685	SM00491	BDU_RS03685
BDU_RS03705	SM00883	Chaperonin 10 Kd subunit
BDU_RS03710	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03715	SM00564	beta-propeller repeat
BDU_RS03735	SM00478	endonuclease III
BDU_RS03780	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03820	SM00257	Lysin motif
BDU_RS03825	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03825	SM00448	cheY-homologous receiver domain
BDU_RS03830	SM00387	Histidine kinase-like ATPases
BDU_RS03830	SM00388	His Kinase A (phosphoacceptor) domain
BDU_RS03965	SM00382	ATPases associated with a variety of cellular activities
BDU_RS03975	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BDU_RS04005	SM00935	Outer membrane protein (OmpH-like)
BDU_RS04015	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BDU_RS04015	SM00534	ATPase domain of DNA mismatch repair MUTS family
BDU_RS04030	SM00316	Ribosomal protein S1-like RNA-binding domain
BDU_RS04050	SM01387	BDU_RS04050
BDU_RS04055	SM00316	Ribosomal protein S1-like RNA-binding domain
BDU_RS04055	SM00322	K homology RNA-binding domain
BDU_RS04100	SM00363	S4 RNA-binding domain
BDU_RS04125	SM00363	S4 RNA-binding domain
BDU_RS04185	SM00487	DEAD-like helicases superfamily
BDU_RS04185	SM00490	helicase superfamily c-terminal domain
BDU_RS04185	SM00847	Helicase associated domain (HA2)  Add an annotation
BDU_RS04190	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BDU_RS04190	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BDU_RS04190	SM00493	BDU_RS04190
BDU_RS04225	SM00382	ATPases associated with a variety of cellular activities
BDU_RS04225	SM01086	C-terminal, D2-small domain, of ClpB protein
BDU_RS04235	SM00487	DEAD-like helicases superfamily
BDU_RS04235	SM00490	helicase superfamily c-terminal domain
BDU_RS06985	SM00278	Helix-hairpin-helix DNA-binding motif class 1
